isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
WTC11_00000001	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00002_+_0_1000
WTC11_00000002	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00003_+_0_1000
WTC11_00000003	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00004_+_0_500
WTC11_00000004	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00009_+_0_1000
WTC11_00000007	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00019_+_0_600
WTC11_00000008	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00022_+_0_700
WTC11_00000010	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00025_+_0_2000
WTC11_00000015	ERCC-00034	+	993	1	FSM	ERCC-00034A	DQ855001	1003	1	0	10	0	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAATAT	NA	False	NA	NA	False	NA	NA	NA	0	993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00034_+_0_1000
WTC11_00000019	ERCC-00040	+	715	1	FSM	ERCC-00040A	DQ883661	728	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	13	728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00040_+_0_700
WTC11_00000020	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00042_+_0_1000
WTC11_00000021	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00043_+_0_1000
WTC11_00000023	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00046_+_0_500
WTC11_00000029	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00060_+_0_500
WTC11_00000030	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00062_+_0_1000
WTC11_00000033	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00071_+_0_600
WTC11_00000035	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00074_+_0_500
WTC11_00000036	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00076_+_0_600
WTC11_00000039	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00079_+_0_600
WTC11_00000041	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00084_+_0_1000
WTC11_00000043	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00092_+_0_1100
WTC11_00000045	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00096_+_0_1100
WTC11_00000049	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00108_+_0_1000
WTC11_00000052	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00111_+_0_1000
WTC11_00000054	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00113_+_0_800
WTC11_00000058	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00130_+_0_1100
WTC11_00000059	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00131_+_0_800
WTC11_00000061	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00136_+_0_1000
WTC11_00000065	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00145_+_0_1000
WTC11_00000073	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00160_+_0_700
WTC11_00000074	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00162_+_0_500
WTC11_00000075	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00163_+_0_500
WTC11_00000079	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00171_+_0_500
WTC11_00000080	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	19.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_+_10792_10897_11188_11403
WTC11_00000081	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_2	265	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_+_10792_10882_11058_11434
WTC11_00000082	SIRV1	-	1311	4	FSM	SIRV1A	SIRV102	1300	4	0	-11	0	5	multi-exon	FALSE	canonical	3	4783	junction_1	1017.87261809456	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10366	995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
WTC11_00000083	SIRV1	-	1382	5	NIC	SIRV1A	novel	1561	6	NA	NA	124	4	intron_retention	FALSE	canonical	3	1688	junction_4	2152.09554852939	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCATACTTCCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10516	996	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV1_-_1485_6337_6814_7552_7815_10282_10367_10444
WTC11_00000084	SIRV1	-	1365	5	NIC	SIRV1A	novel	1363	6	NA	NA	-61	5	intron_retention	FALSE	canonical	3	1470	junction_4	2238.54428144721	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10701	995	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV1_-_1485_6337_6814_7552_7815_10282_10367_10647
WTC11_00000085	SIRV1	-	978	3	FSM	SIRV1A	SIRV106	973	3	0	-5	0	5	multi-exon	FALSE	canonical	3	870	junction_2	92	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10786	995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_7552_7809_10553
WTC11_00000086	SIRV1	-	1566	6	FSM	SIRV1A	SIRV101	1561	6	0	-5	0	5	multi-exon	FALSE	canonical	3	1688	junction_5	2318.84911108938	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10786	995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
WTC11_00000087	SIRV1	-	1368	6	FSM	SIRV1A	SIRV103	1363	6	0	-5	0	5	multi-exon	FALSE	canonical	3	1470	junction_5	2371.66899882762	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10791	995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
WTC11_00000088	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_4	2566.82264677558	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
WTC11_00000090	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10001_+_0_9900
WTC11_00000091	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10002_+_0_10000
WTC11_00000094	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10003_+_0_10000
WTC11_00000095	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV12001_+_0_12000
WTC11_00000096	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV12002_+_0_12000
WTC11_00000099	SIRV2	-	2052	11	FSM	SIRV2A	SIRV201	2051	11	0	-1	0	1	multi-exon	FALSE	canonical	3	263	junction_6	1137.82325516752	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5907	999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
WTC11_00000100	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	1140.72846900566	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
WTC11_00000101	SIRV2	-	741	3	FSM	SIRV2A	SIRV204	740	3	0	-1	0	1	multi-exon	FALSE	canonical	3	2745	junction_1	217	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTATCCTATATCGGAA	NA	False	NA	NA	False	NA	NA	NA	4732	3642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_3826_3966_4480_4687
WTC11_00000102	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_4	277.837519964457	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
WTC11_00000104	SIRV3	+	1829	2	FSM	SIRV3A	SIRV302	1807	2	-22	0	-3	0	multi-exon	FALSE	canonical	3	906	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1941	7822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_6057
WTC11_00000105	SIRV3	+	2376	3	FSM	SIRV3A	SIRV306	2373	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	864	junction_2	1416.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1941	8292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_6057
WTC11_00000106	SIRV3	+	2098	4	NIC	SIRV3A	novel	2467	5	NA	NA	-1	-157	intron_retention	FALSE	canonical	3	906	junction_1	695.104948111354	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATATTTGAGATCAACA	NA	False	NA	NA	False	NA	NA	NA	1943	8780	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_6057_7989_8127_8208_8755
WTC11_00000107	SIRV3	+	1105	8	FSM	SIRV3A	SIRV304	1083	8	-22	0	-3	0	multi-exon	FALSE	canonical	3	1354	junction_6	995.470804418181	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1941	8937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
WTC11_00000108	SIRV3	+	2543	6	NIC	SIRV3A	novel	1083	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1379	junction_4	863.006280394297	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1943	8937	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4568_4780_6057_7989_8127_8208_8755
WTC11_00000109	SIRV3	+	801	5	FSM	SIRV3A	SIRV307	779	5	-22	0	-3	0	multi-exon	FALSE	canonical	3	1338	junction_4	964.45253252817	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1941	8939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
WTC11_00000110	SIRV3	+	2470	5	FSM	SIRV3A	SIRV301	2467	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	1379	junction_3	662.96511974613	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1941	8939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
WTC11_00000111	SIRV3	+	468	4	NIC	SIRV3A	novel	436	3	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	1806	junction_3	880.330367280123	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	1973	6718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4568_4780_6570
WTC11_00000112	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1806	junction_2	921.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_4081_4568_4780_6570
WTC11_00000113	SIRV3	-	482	3	FSM	SIRV3B	SIRV308	479	3	0	-3	0	3	multi-exon	FALSE	canonical	3	6161	junction_2	18	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATGGCGGACAT	NA	False	NA	NA	False	NA	NA	NA	1982	997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_1168_1532_1765_1902
WTC11_00000114	SIRV3	-	595	3	FSM	SIRV3C	SIRV310	589	3	0	-6	0	6	multi-exon	FALSE	canonical	3	1420	junction_2	31.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGGGTACTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	9914	8753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_8967_9189_9325_9667
WTC11_00000115	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_2	30	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_8976_9189_9299_9434
WTC11_00000116	SIRV3	+	2382	6	NIC	SIRV3A	novel	1083	8	NA	NA	-3	-157	intron_retention	FALSE	canonical	3	1379	junction_4	903.682156513008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATATTTGAGATCAACA	NA	False	NA	NA	False	NA	NA	NA	1941	8780	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4574_4780_6057_7989_8127_8208_8755
WTC11_00000120	SIRV3	+	2001	3	NIC	SIRV3A	novel	2018	3	NA	NA	12	0	intron_retention	FALSE	canonical	3	1538	junction_2	322.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1975	7822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4568_4775_6057
WTC11_00000121	SIRV4	+	1572	3	FSM	SIRV4C	SIRV409	1567	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	1031	junction_1	44.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	995	3403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_+_1347_1678_1886_2389
WTC11_00000122	SIRV4	+	952	2	FSM	SIRV4C	SIRV410	950	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	1905	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1453	2771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_+_1886_2251
WTC11_00000123	SIRV4	-	635	2	FSM	SIRV4B	SIRV406	617	2	0	-18	0	18	multi-exon	FALSE	canonical	3	2881	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTTCAAGCTGTAGTA	NA	False	NA	NA	False	TTTAAA	-9	NA	5158	3619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_4104_5007
WTC11_00000124	SIRV4	-	594	4	FSM	SIRV4A	SIRV404	592	4	0	-2	0	2	multi-exon	FALSE	canonical	3	810	junction_3	3229.99755761862	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	14623	8320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
WTC11_00000125	SIRV4	-	672	4	FSM	SIRV4A	SIRV403	670	4	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	3561.98599410809	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	15122	8320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
WTC11_00000126	SIRV4	-	575	5	FSM	SIRV4A	SIRV408	570	5	-2	-3	-2	2	multi-exon	FALSE	canonical	0	0	junction_4	3090.27210573762	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	15124	8320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
WTC11_00000127	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8991_13672
WTC11_00000128	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4001_+_0_4000
WTC11_00000129	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4002_+_0_4000
WTC11_00000130	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4003_+_0_4000
WTC11_00000131	SIRV5	+	562	2	FSM	SIRV5A	SIRV506	552	2	-10	0	-2	0	multi-exon	FALSE	canonical	3	13272	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	998	2398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987
WTC11_00000132	SIRV5	+	556	2	FSM	SIRV5A	SIRV511	546	2	-10	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	998	2398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1144_1987
WTC11_00000133	SIRV5	+	2005	18	FSM	SIRV5A	SIRV502	1984	18	-21	0	-2	0	multi-exon	FALSE	canonical	3	824	junction_4	3929.46167897146	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	998	10989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
WTC11_00000134	SIRV5	+	2031	16	FSM	SIRV5A	SIRV505	2029	16	-2	0	-2	0	multi-exon	FALSE	canonical	3	6503	junction_10	2237.21177063475	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	998	10991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
WTC11_00000135	SIRV5	+	2095	17	FSM	SIRV5A	SIRV508	2085	17	-10	0	-2	0	multi-exon	FALSE	canonical	3	2722	junction_10	3161.7140914532	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	998	10991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
WTC11_00000136	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4288	junction_1	3154.16350876108	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
WTC11_00000137	SIRV5	+	2475	18	FSM	SIRV5A	SIRV510	2474	18	-1	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_17	3356.7859535151	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1027	11867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
WTC11_00000138	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2069	junction_14	3513.9813329888	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
WTC11_00000139	SIRV5	+	2528	17	NIC	SIRV5A	novel	2474	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1119	junction_16	3053.81612123974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	1056	11866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858_10992_11311
WTC11_00000140	SIRV5	+	4394	18	NIC	SIRV5A	novel	2085	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1119	junction_17	3595.27802679645	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	1056	13606	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858_10992_11311
WTC11_00000141	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_2	5951.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_8586_10858_10992_11133
WTC11_00000142	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1119	junction_3	5326.59080046098	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
WTC11_00000143	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_11100_13600
WTC11_00000145	SIRV5	+	2565	18	NIC	SIRV5A	novel	2474	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	1710	junction_17	3358.64685741189	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	998	11866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
WTC11_00000147	SIRV6	+	1181	11	NIC	SIRV6A	novel	1528	10	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	11180.6770796763	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	997	11270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_7805_7924_10724_10819_11031_11109_11205
WTC11_00000149	SIRV6	+	1438	9	FSM	SIRV6A	SIRV601	1435	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	2387	junction_3	9022.52467352542	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	997	11826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
WTC11_00000150	SIRV6	+	602	8	FSM	SIRV6A	SIRV602	574	8	-37	9	0	0	multi-exon	FALSE	canonical	3	10205	junction_3	6778.77356916727	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	1087	11270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
WTC11_00000151	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	10816.0380608305	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
WTC11_00000152	SIRV6	+	498	4	FSM	SIRV6A	SIRV609	485	4	-13	0	0	0	multi-exon	FALSE	canonical	3	17716	junction_3	6509.94062099562	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1124	2120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
WTC11_00000153	SIRV6	+	580	4	FSM	SIRV6A	SIRV607	574	4	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12415.5112751035	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1124	2540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
WTC11_00000154	SIRV6	+	1094	9	FSM	SIRV6A	SIRV605	1088	9	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9760.22235834691	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1124	11331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
WTC11_00000155	SIRV6	+	456	3	FSM	SIRV6A	SIRV611	454	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	3029	junction_1	14741	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1301	1950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1382_1468_1535_1640
WTC11_00000156	SIRV6	+	534	4	FSM	SIRV6A	SIRV616	531	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	1100	junction_2	8524.62155562736	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2282	10788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
WTC11_00000157	SIRV6	+	548	4	FSM	SIRV6A	SIRV606	545	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	14712	junction_1	4112.8940608233	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2282	10788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
WTC11_00000158	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14712	junction_1	3667.11217274574	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
WTC11_00000159	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3392	junction_3	8671.0982291749	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
WTC11_00000160	SIRV6	+	379	4	FSM	SIRV6A	SIRV608	377	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	21619	junction_1	2534.81482996731	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3021	11270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
WTC11_00000161	SIRV6	+	1395	6	FSM	SIRV6A	SIRV613	1311	6	-84	0	-2	0	multi-exon	FALSE	canonical	3	567	junction_2	11481.5370399612	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3021	11824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
WTC11_00000162	SIRV6	+	1970	1	FSM	SIRV6A	SIRV603	1969	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8998	10968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_9000_11000
WTC11_00000163	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	22297	junction_2	2503	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_10819_11031_11109_11205
WTC11_00000164	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_-_1500_1800
WTC11_00000166	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6001_+_0_6000
WTC11_00000167	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6002_+_0_6000
WTC11_00000168	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6003_+_0_6000
WTC11_00000169	SIRV7	-	2249	6	FSM	SIRV7A	SIRV702	2247	6	0	-2	0	2	multi-exon	FALSE	canonical	3	268	junction_3	1581.10551197572	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAATATGAATCAACTC	NA	False	NA	NA	False	TATAAA	-24	NA	114916	998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
WTC11_00000170	SIRV7	-	2500	5	FSM	SIRV7A	SIRV703	2498	5	0	-2	0	2	multi-exon	FALSE	canonical	3	1263	junction_2	1949.6738188733	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAATATGAATCAACTC	NA	False	NA	NA	False	TATAAA	-24	NA	147918	998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
WTC11_00000171	SIRV7	-	2469	5	FSM	SIRV7A	SIRV701	2462	5	-2	-5	0	2	multi-exon	FALSE	canonical	3	2237	junction_2	1447.67371582826	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAATATGAATCAACTC	NA	False	NA	NA	False	TATAAA	-24	NA	147925	998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
WTC11_00000172	SIRV7	-	430	3	FSM	SIRV7A	SIRV704	428	3	0	-2	0	2	multi-exon	FALSE	canonical	3	5708	junction_1	1622	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGTATTTGCTGCTTG	NA	False	NA	NA	False	ATTAAA	-35	NA	114738	55847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_56098_78841_78964_114680
WTC11_00000174	SIRV7	-	1028	4	NIC	SIRV7A	novel	949	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	5708	junction_1	1508.24496978736	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTATTTGCTGCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	147957	55848	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_78841_78964_114680_114989_147608
WTC11_00000175	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3729	junction_1	1870.01983612474	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
WTC11_00000176	SIRV7	-	895	6	FSM	SIRV7A	SIRV708	889	6	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1868.58798026745	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
WTC11_00000177	SIRV7	-	876	5	NIC	SIRV7A	novel	889	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	2072.95206167436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147918	56031	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_70883_70988_78841_78964_114686_114961_147608
WTC11_00000178	SIRV7	-	1107	6	NIC	SIRV7A	novel	889	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2177.30185321191	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGTATTTGCTGCTTG	NA	False	NA	NA	False	ATTAAA	-35	NA	147957	55847	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114989_147608
WTC11_00000179	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8001_+_0_8000
WTC11_00000180	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8002_+_0_8000
WTC11_00000181	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8003_+_0_8000
WTC11_00000184	chr1	+	1543	1	FSM	ENSG00000237973.1	ENST00000414273.1	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	631062	False	NA	-84	True	CATAAA	-8	NA	631073	632616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_631100_632600
WTC11_00000185	chr1	+	2735	2	Genic_Genomic	ENSG00000237973.1_ENSG00000229344.1	novel	1543	1	NA	NA	-323	14074	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAATAAAATTTCCAGAA	630739	False	NA	NA	False	AAAAAG	-4	NA	630750	647512	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_633461_647487
WTC11_00000186	chr1	+	2166	1	FSM	ENSG00000229344.1	ENST00000427426.1	682	1	0	-1484	0	1484	mono-exon	FALSE	NA	NA	NA	NA	NA	18908	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTAAAATATTAGATATT	632746	False	NA	NA	False	NA	NA	NA	632756	634922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_632800_634900
WTC11_00000188	chr1	+	681	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6057	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	633685	False	NA	-23	True	NA	NA	NA	633695	634376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_633700_634400
WTC11_00000192	chr1	+	6605	5	FSM	ENSG00000228794.11	ENST00000445118.7	6616	5	-1	12	-1	-12	multi-exon	FALSE	canonical	3	32	junction_2	12.2983738762488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAACAGTAATTTTAATG	826886	True	NA	NA	False	AATAAA	-7	NA	827596	859434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390
WTC11_00000202	chr1	+	7334	37	NIC	ENSG00000188157.15	novel	7394	39	NA	NA	0	0	intron_retention	TRUE	canonical	3	35	junction_4	50.4945602741914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGCTTTTGTCCA	1011740	True	NA	14	True	AATAAA	-14	NA	1020119	1056112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1020374_1022200_1022463_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051031_1051044_1051252_1051370_1051452_1051646_1051727_1051816_1053752_1053978_1054447_1054552_1054823
WTC11_00000203	chr1	+	7368	36	FSM	ENSG00000188157.15	ENST00000379370.7	7326	36	-46	4	-46	0	multi-exon	TRUE	canonical	3	35	junction_4	51.2421701335921	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGCTTTTGTCCA	1011694	True	NA	14	True	AATAAA	-14	NA	1020073	1056112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1020374_1022200_1022463_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051252_1051370_1051452_1051646_1051727_1051816_1053752_1053978_1054447_1054552_1054823
WTC11_00000212	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	29.9829883740219	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304240	True	NA	17	True	AATAAA	-17	NA	1308596	1311677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
WTC11_00000218	chr1	+	2766	2	FSM	ENSG00000224870.8	ENST00000659048.2	2227	2	1	-540	1	540	multi-exon	FALSE	canonical	3	115	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGGAAGTGCCTGCA	1397611	True	NA	NA	False	NA	NA	NA	1399519	1402586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1400304_1400604
WTC11_00000222	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	1397897	False	NA	14	True	TATAAA	-7	NA	1399805	1402033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1399800_1402000
WTC11_00000230	chr1	+	3394	16	Fusion	ENSG00000197785.14_ENSG00000160072.20	novel	4098	16	NA	NA	-7	0	multi-exon	FALSE	canonical	3	124	junction_2	137.357667746977	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1464801	True	NA	28	True	AATAAA	-18	NA	1471757	1534685	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_1472090_1477273_1477351_1477750_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
WTC11_00000231	chr1	+	3678	14	FSM	ENSG00000160072.20	ENST00000472194.6	4314	14	0	636	0	-636	multi-exon	FALSE	canonical	3	221	junction_11	122.788219082948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTTCCTTTTAGAGA	1478010	False	NA	NA	False	NA	NA	NA	1478025	1497212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
WTC11_00000235	chr1	+	3367	5	FSM	ENSG00000160072.20	ENST00000474481.1	3367	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	139.708625360069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGTGTCTCTCTATTG	1484553	False	NA	17	True	AATAAA	-17	NA	1484568	1496201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1485172_1485781_1486236_1486543_1486669_1489203_1490672_1495484
WTC11_00000236	chr1	+	2613	14	FSM	ENSG00000197785.14	ENST00000672388.1	2610	14	-3	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	140.778688206896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCGGGGGTGTCTGA	1499132	True	NA	-73	True	NA	NA	NA	1512161	1534584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1512474_1516011_1516089_1517310_1517776_1518920_1518991_1520140_1520307_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
WTC11_00000237	chr1	+	2481	16	FSM	ENSG00000197785.14	ENST00000378756.8	2481	16	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_14	58.3011339702945	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1499132	True	NA	28	True	AATAAA	-18	NA	1512161	1534685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
WTC11_00000246	chr1	+	3344	19	FSM	ENSG00000197530.13	ENST00000511502.5	3326	19	-18	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	125.955459499689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGCCTCTGCTGTCTGC	1614987	True	NA	10	True	TATAAA	-16	NA	1615495	1630604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1615634_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
WTC11_00000247	chr1	+	3252	20	FSM	ENSG00000197530.13	ENST00000505820.7	3248	20	-4	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	123.734636976926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	1614987	True	NA	11	True	TATAAA	-17	NA	1615495	1630605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1615634_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
WTC11_00000255	chr1	+	530	3	FSM	ENSG00000197530.13	ENST00000463492.1	486	3	-52	8	2	-8	multi-exon	FALSE	canonical	3	29	junction_2	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTAAATAGGATTTGGTT	1614541	True	NA	9	True	AATAAA	-19	NA	1615915	1617315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1616101_1616507_1616615_1617077
WTC11_00000266	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	213.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1627608	False	NA	9	True	TATAAA	-15	NA	1629105	1630603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1629312_1629638_1629705_1630291
WTC11_00000284	chr1	+	2796	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	-103	-4	-55	0	multi-exon	FALSE	canonical	3	176	junction_5	83.7365246207147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	2586605	False	NA	18	True	AATAAA	-18	NA	2586694	2591467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
WTC11_00000289	chr1	+	2828	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	-82	1	-55	0	multi-exon	FALSE	canonical	3	154	junction_5	91.3991551140138	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	2586605	False	NA	18	True	AATAAA	-18	NA	2586694	2591467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
WTC11_00000306	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856854	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
WTC11_00000308	chr1	+	12077	6	FSM	ENSG00000196581.11	ENST00000378191.5	12102	6	18	7	18	-7	multi-exon	FALSE	canonical	1	2	junction_1	3.18747549010185	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAGAAAAAAG	4654390	True	NA	NA	False	ATTAAA	-25	NA	4654626	4792527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_4655455_4711899_4712700_4769852_4769941_4772279_4772526_4774426_4774559_4782544
WTC11_00000312	chr1	+	3902	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	99	0	-10	0	multi-exon	FALSE	canonical	2	20	junction_1	6.1295537008357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	6025924	True	NA	6	True	AATAAA	-14	NA	6026261	6101178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
WTC11_00000314	chr1	+	551	3	FSM	ENSG00000158286.13	ENST00000484435.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATGCTTGCACATGCA	6206078	False	NA	NA	False	NA	NA	NA	6206128	6207564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6206303_6206535_6206727_6207378
WTC11_00000326	chr1	+	3990	7	FSM	ENSG00000204859.13	ENST00000482360.5	2484	7	-1506	0	-1506	0	multi-exon	TRUE	canonical	3	98	junction_4	9.322910847298	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6582317	False	NA	16	True	AATAAA	-24	NA	6583795	6589280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
WTC11_00000329	chr1	+	1235	5	FSM	ENSG00000041988.16	ENST00000307896.10	1046	5	11	-200	0	6	multi-exon	FALSE	canonical	3	25	junction_2	38.7072344659238	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCCCATCATCATTTTCT	6623780	True	NA	20	True	AATAAA	-20	NA	6625191	6633568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6625293_6628498_6628692_6630290_6630354_6632390_6632496_6632795
WTC11_00000332	chr1	+	893	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	-38	8	-28	0	multi-exon	FALSE	canonical	3	253	junction_3	2371.92256759504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGAATGTGTGGGTCAC	6761951	True	NA	7	True	AATAAA	-7	NA	6785425	6888193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
WTC11_00000334	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4330	junction_1	571.412868831869	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	6762005	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
WTC11_00000349	chr1	+	804	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	-9	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1848.56629851353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	7904171	True	NA	29	True	AATAAA	-19	NA	7961691	7985281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
WTC11_00000351	chr1	+	928	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	21	0	-21	multi-exon	FALSE	canonical	3	1587	junction_1	1359.42064865883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAATATTTTATTTTCT	7904227	True	NA	NA	False	NA	NA	NA	7961747	7971500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
WTC11_00000352	chr1	+	977	7	FSM	ENSG00000116288.13	ENST00000377491.5	977	7	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	1781.06023355628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATAAACAGGGCA	7904373	False	NA	-2	True	NA	NA	NA	7961893	7985250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7962082_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
WTC11_00000356	chr1	+	3865	7	FSM	ENSG00000171612.7	ENST00000302692.7	3865	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	25.844083784624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTTAGTTTTCTGC	9536621	True	NA	NA	False	AATAAA	-16	NA	9539464	9585173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9539748_9553625_9553806_9567283_9567362_9570257_9570359_9573345_9573413_9579953_9580235_9582298
WTC11_00000357	chr1	+	1251	5	NIC	ENSG00000171612.7	novel	3865	7	NA	NA	42	-2404	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	105.122547533819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATTTGGCTTGTGTCC	9536663	True	NA	6	True	ATTAAA	-20	NA	9539506	9582769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_9539748_9553625_9553806_9567283_9567362_9579953_9580235_9582298
WTC11_00000359	chr1	+	3992	11	FSM	ENSG00000188807.13	ENST00000340381.11	3815	11	-181	4	-181	0	multi-exon	FALSE	canonical	3	70	junction_9	19.4411933790084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCTGGCTGTCTGT	NA	False	NA	16	True	AAAAAG	-29	NA	9588729	9614873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9609839_9609912_9610505_9610806_9611752_9611891_9612985
WTC11_00000360	chr1	+	3862	6	FSM	ENSG00000188807.13	ENST00000340305.9	3851	6	-11	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	11.9733036376766	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTCAGGTGCCGCGTCT	9587719	True	NA	28	True	AATAAA	-28	NA	9588910	9604954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068
WTC11_00000375	chr1	+	767	6	FSM	ENSG00000142657.21	ENST00000460189.1	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_2	572.171163202061	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTTATGCTTTTCACA	10399425	False	NA	NA	False	NA	NA	NA	10399631	10413251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10399705_10400392_10400573_10404160_10404280_10408070_10408141_10411417_10411553_10413061
WTC11_00000381	chr1	+	1513	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	-125	-474	-125	0	multi-exon	FALSE	canonical	3	91	junction_1	69.9405997972565	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	10430531	False	NA	23	True	AATAAA	-15	NA	10430657	10442808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
WTC11_00000387	chr1	+	2797	7	NNC	ENSG00000120948.19	novel	1031	7	NA	NA	0	18833	intron_retention	FALSE	non_canonical	0	0	junction_6	444.866272041386	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTCGCTCTGTCC	10992045	True	NA	NA	False	NA	NA	NA	11012621	11049361	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11024044_11049332
WTC11_00000392	chr1	+	4186	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	-1	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	60.7177074666032	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	10992076	True	NA	4	True	AATAAA	-20	NA	11012652	11025492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
WTC11_00000405	chr1	+	330	2	FSM	ENSG00000230337.2	ENST00000435388.2	685	2	340	15	95	-15	multi-exon	FALSE	canonical	2	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATATCCAGTTAAGAGAA	11099611	False	NA	NA	False	AATAAA	-6	NA	11099769	11102085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11099815_11101800
WTC11_00000408	chr1	+	2788	2	FSM	ENSG00000204624.8	ENST00000423056.2	910	2	-232	-1646	-221	1646	multi-exon	FALSE	canonical	2	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCGAGAAACCTGTTTAT	11478904	True	NA	-3	True	AATAAA	-8	NA	11478933	11483606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11479373_11481257
WTC11_00000410	chr1	+	2950	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	-22	0	-2	0	multi-exon	FALSE	canonical	3	57	junction_3	65.6219475480574	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11654804	False	NA	NA	False	ATTAAA	-22	NA	11654854	11663327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
WTC11_00000413	chr1	+	3322	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	47	junction_1	72.2905019118464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11654804	False	NA	NA	False	ATTAAA	-22	NA	11654854	11663327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
WTC11_00000414	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.2836118333013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	11653220	True	NA	NA	False	NA	NA	NA	11654909	11661349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
WTC11_00000415	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	59.721750644133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653220	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
WTC11_00000417	chr1	+	769	6	FSM	ENSG00000132879.14	ENST00000471895.1	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	75.7696509164454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTCGGGTATTT	11658516	False	NA	NA	False	ATTAAA	-19	NA	11658541	11663324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11658629_11658735_11658872_11661129_11661309_11662624_11662732_11662851_11662929_11663141
WTC11_00000422	chr1	+	1368	6	FSM	ENSG00000177674.16	ENST00000476512.5	942	6	-42	-384	-9	0	multi-exon	FALSE	canonical	3	53	junction_2	415.30114374993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	11726670	True	NA	-42	True	NA	NA	NA	11736074	11750710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11736236_11745802_11745838_11745987_11746224_11747439_11747546_11748414_11748611_11750076
WTC11_00000424	chr1	+	1105	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	-5	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	326.56727867317	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	11726737	True	NA	19	True	ATTAAA	-20	NA	11736141	11750771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
WTC11_00000425	chr1	+	1149	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	-19	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	125.736579800788	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	11726712	True	NA	17	True	ATTAAA	-18	NA	11736116	11750769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
WTC11_00000435	chr1	+	304	1	FSM	ENSG00000285646.2	ENST00000666735.1	1180	1	1050	-174	1049	174	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCCCGGGCTCAGGC	11908489	False	NA	NA	False	NA	NA	NA	11909200	11909504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11909200_11909500
WTC11_00000443	chr1	+	4577	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	-207	37	0	0	multi-exon	FALSE	canonical	3	164	junction_1	44.934520261277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTGGAAACTAAAATAA	11980170	True	NA	-27	True	NA	NA	NA	11980236	12013471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000445	chr1	+	4715	18	FSM	ENSG00000116688.18	ENST00000675959.1	4715	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	45.5853889054475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980170	True	NA	2	True	AATAAA	-9	NA	11980236	12013500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000447	chr1	+	4772	20	FSM	ENSG00000116688.18	ENST00000675231.1	4772	20	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	119.853534808508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980187	True	NA	2	True	AATAAA	-9	NA	11980298	12013500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981809_11982115_11982522_11982591_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000450	chr1	+	4511	19	NIC	ENSG00000116688.18	novel	4772	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	71.4776361468103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTGGAAACTAAAATAA	11980187	True	NA	-27	True	NA	NA	NA	11980298	12013471	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11980485_11981973_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000451	chr1	+	4589	20	FSM	ENSG00000116688.18	ENST00000675512.1	4580	20	-9	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	115.149908315385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11970183	True	NA	2	True	AATAAA	-9	NA	11980434	12013500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981973_11982115_11989164_11989344_11992278_11992464_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000452	chr1	+	4482	11	FSM	ENSG00000116688.18	ENST00000675404.1	4447	11	-67	32	-67	0	multi-exon	FALSE	canonical	3	294	junction_9	20.7819633336218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTGGAAACTAAAATAA	12000271	False	NA	-27	True	NA	NA	NA	12000282	12013471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00000453	chr1	+	2666	3	FSM	ENSG00000116688.18	ENST00000676295.1	2622	3	-39	-5	-39	0	multi-exon	FALSE	canonical	3	294	junction_1	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	12006717	False	NA	7	True	AATAAA	-14	NA	12006728	12013505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12007250_12009591_12009727_12011495
WTC11_00000454	chr1	+	779	6	FSM	ENSG00000116691.11	ENST00000478749.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	208.648412407092	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGCCCTGGGACCCTGG	12010898	True	NA	NA	False	NA	NA	NA	12019465	12029855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764
WTC11_00000456	chr1	+	1324	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	171.668239272732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	12010945	True	NA	25	True	AATAAA	-16	NA	12019512	12032039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
WTC11_00000457	chr1	+	1709	6	FSM	ENSG00000116691.11	ENST00000466860.5	1709	6	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_4	23.5575890107625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCTGGGGTGGAGGGT	12022187	True	NA	-39	True	NA	NA	NA	12022221	12031975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12022443_12022832_12022918_12029032_12029142_12029222_12030125_12031265_12031404_12031721
WTC11_00000466	chr1	+	443	4	FSM	ENSG00000048707.15	ENST00000489961.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.6024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGAATGCTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	12253733	12257955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12253827_12256275_12256504_12256986_12257088_12257934
WTC11_00000468	chr1	+	488	4	FSM	ENSG00000048707.15	ENST00000643711.1	582	4	94	0	94	0	multi-exon	FALSE	canonical	3	14	junction_1	4.08248290463863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTGATTGTCTAGC	NA	False	NA	NA	False	NA	NA	NA	12342898	12348973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12343052_12345373_12345510_12346604_12346653_12348822
WTC11_00000469	chr1	+	2922	6	FSM	ENSG00000162493.17	ENST00000294489.10	3104	6	182	0	-115	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	NA	False	NA	15	True	AATAAA	-19	NA	13583646	13617957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
WTC11_00000470	chr1	+	4509	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	-186	-3537	-115	94	multi-exon	FALSE	canonical	3	737	junction_4	47.3623004086584	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTTGAGAGTGGATT	NA	False	NA	109	True	NA	NA	NA	13583646	13618051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
WTC11_00000471	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	168.31803230789	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578885	True	NA	15	True	AATAAA	-19	NA	13583761	13617957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
WTC11_00000473	chr1	+	5809	5	FSM	ENSG00000116731.23	ENST00000343137.8	5797	5	-12	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20.9582919151347	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTGTTTTGGACGCT	13748235	True	NA	9	True	AATAAA	-14	NA	13749402	13787657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13749488_13769117_13769174_13773077_13773189_13778417_13782832_13786514
WTC11_00000475	chr1	+	5616	7	FSM	ENSG00000189337.17	ENST00000491547.1	5592	7	-24	0	-5	0	multi-exon	FALSE	canonical	2	14	junction_1	11.2361025271221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	14597590	True	NA	15	True	TTTAAA	-45	NA	14598679	15066560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_14599224_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15063623_15065629
WTC11_00000476	chr1	+	3939	8	ISM	ENSG00000189337.17	ENST00000376030.7	6049	15	-5	49891	-5	0	5prime_fragment	FALSE	canonical	2	14	junction_1	10.5791477608992	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATTCTATGTTATTTGA	14597590	True	NA	13	True	AATAAA	-19	NA	14598679	15068152	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_14599224_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
WTC11_00000477	chr1	+	3908	8	FSM	ENSG00000189337.17	ENST00000361144.9	3838	8	-70	0	-70	0	multi-exon	FALSE	canonical	3	24	junction_1	7.40104791256493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATTCTATGTTATTTGA	14923589	True	NA	13	True	AATAAA	-19	NA	14924059	15068152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_14924573_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
WTC11_00000478	chr1	+	1912	3	FSM	ENSG00000171729.14	ENST00000400796.7	1842	3	-70	0	-70	0	multi-exon	FALSE	canonical	3	16	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAAATGTTCTTTTT	15153593	False	NA	-39	True	AAAAAG	-15	NA	15153662	15220408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15153955_15214894_15215432_15219325
WTC11_00000479	chr1	+	1990	4	FSM	ENSG00000171729.14	ENST00000376008.3	1971	4	-19	0	-5	0	multi-exon	FALSE	canonical	3	20	junction_2	9.7410927974683	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGGTGCTGAGTTACT	15153201	True	NA	31	True	AATAAA	-18	NA	15153727	15220478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15153955_15210489_15210563_15214894_15215432_15219325
WTC11_00000482	chr1	+	5848	14	FSM	ENSG00000116138.13	ENST00000616884.4	5882	14	34	0	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	15.4720591837226	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGGGGTAGCCCTTGC	15524630	True	NA	21	True	AATAAA	-18	NA	15526846	15571731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15526959_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
WTC11_00000486	chr1	+	4004	19	FSM	ENSG00000116786.13	ENST00000375793.2	4004	19	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	33.210003327125	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	15682573	False	NA	21	True	AATAAA	-22	NA	15684389	15734769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731888_15732049_15732349_15732530_15732611_15732729_15733796
WTC11_00000489	chr1	+	600	4	FSM	ENSG00000162458.13	ENST00000502638.5	582	4	-18	0	-17	0	multi-exon	FALSE	canonical	2	9	junction_1	152.740156984192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCAGTTTGTGAGGCCCG	15757795	True	NA	NA	False	NA	NA	NA	15757928	15765076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758044_15758173_15758356_15764495_15764686_15764963
WTC11_00000490	chr1	+	571	4	FSM	ENSG00000162458.13	ENST00000483633.6	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	106.135133988075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTACTGCCTGCCCCCC	15753822	True	NA	NA	False	NA	NA	NA	15758783	15767559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375
WTC11_00000491	chr1	+	3367	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	83.9985118915805	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753783	True	NA	20	True	AATAAA	-21	NA	15758744	15786589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
WTC11_00000494	chr1	+	3325	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	-11	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	48.7568905386716	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753822	True	NA	20	True	AATAAA	-21	NA	15758783	15786589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
WTC11_00000496	chr1	+	3099	8	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	99.1247410373126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGTTGTGTGTAGGC	15759556	False	NA	19	True	AATAAA	-20	NA	15764517	15786588	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
WTC11_00000499	chr1	+	353	1	FSM	ENSG00000178715.8	ENST00000321418.6	438	1	-4	89	-4	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGCTGGTAGCTGAT	NA	False	NA	NA	False	NA	NA	NA	15828227	15828580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15828200_15828600
WTC11_00000503	chr1	+	2697	2	FSM	ENSG00000065526.12	ENST00000487496.1	543	2	15	-2169	15	1257	multi-exon	FALSE	canonical	3	66	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCAGCCAGCCTGGCTC	15938562	False	NA	NA	False	NA	NA	NA	15938597	15941713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15938877_15939295
WTC11_00000505	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	261.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353634	True	NA	20	True	TATAAA	-33	NA	16367224	16398145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16393227_16393483_16395037
WTC11_00000507	chr1	+	3575	5	FSM	ENSG00000055070.17	ENST00000472351.5	791	5	-32	-2752	-10	0	multi-exon	FALSE	canonical	1	2	junction_2	311.87096690779	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	16353624	True	NA	17	True	TATAAA	-30	NA	16367214	16398142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16387054_16387126_16391374_16391425_16393227_16393483_16395037
WTC11_00000508	chr1	+	3424	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	-23	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	247.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	16353651	True	NA	17	True	TATAAA	-30	NA	16367241	16398142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16393230_16393483_16395037
WTC11_00000509	chr1	+	3497	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	-17	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	284.465580811926	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353634	True	NA	20	True	TATAAA	-33	NA	16367224	16398145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
WTC11_00000513	chr1	+	2009	9	NNC	ENSG00000157191.20	novel	981	9	NA	NA	0	46337	intron_retention	FALSE	non_canonical	0	0	junction_8	153.251427399551	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTCTATTATTCATACC	16433621	True	NA	NA	False	NA	NA	NA	16440755	16506415	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841_16460075_16506388
WTC11_00000519	chr1	+	6679	37	FSM	ENSG00000058453.17	ENST00000375541.10	6660	37	-19	0	-19	0	multi-exon	FALSE	canonical	3	31	junction_2	47.3939605857118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	16920375	True	NA	26	True	TTTAAA	-4	NA	16921911	16972964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16922079_16922662_16922799_16924324_16924480_16929845_16930032_16930123_16930208_16930285_16930348_16930428_16930595_16931290_16931398_16936636_16936874_16937640_16937738_16938399_16938484_16938908_16939143_16939893_16940094_16944099_16944283_16945461_16945607_16946258_16946406_16946760_16946992_16948330_16948525_16948798_16948927_16950952_16951123_16953301_16953482_16954222_16954358_16954733_16954878_16955311_16955551_16955996_16956157_16958582_16958751_16960757_16961131_16965722_16965893_16965998_16966120_16966407_16966572_16968202_16968419_16969115_16969341_16969784_16969935_16970252_16970454_16970635_16970768_16971464_16971648_16972359
WTC11_00000520	chr1	+	6341	35	NIC	ENSG00000058453.17	novel	6660	37	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	49.0115179598996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	16920375	True	NA	26	True	TTTAAA	-4	NA	16921911	16972964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_16922079_16922662_16922799_16929845_16930032_16930123_16930208_16930285_16930348_16930428_16930595_16931290_16931398_16936636_16936874_16937640_16937738_16938399_16938484_16938908_16939143_16939893_16940094_16944099_16944283_16945461_16945607_16946258_16946406_16946760_16946992_16948330_16948525_16948798_16948927_16950952_16951123_16953301_16953482_16954222_16954358_16954733_16954878_16955311_16955551_16955996_16956157_16958582_16958751_16960757_16961131_16965722_16965893_16965998_16966120_16966407_16966572_16968202_16968419_16969115_16969341_16969784_16969935_16970252_16970454_16970635_16970768_16972359
WTC11_00000531	chr1	+	2274	2	FSM	ENSG00000074964.17	ENST00000495593.1	2261	2	-17	4	-17	1	multi-exon	FALSE	canonical	3	208	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTGAGGTTTTGTTGT	NA	False	NA	13	True	AATAAA	-22	NA	17694029	17697870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_17695281_17696847
WTC11_00000534	chr1	+	1652	10	NNC	ENSG00000117154.12	novel	1892	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	68.2529789518558	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	18104588	True	NA	16	True	ATTAAA	-23	NA	18107800	18378483	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365459_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
WTC11_00000544	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	15.0847943442449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
WTC11_00000551	chr1	+	671	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	-2	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2417.37671609123	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	19555492	True	NA	-29	True	NA	NA	NA	19597038	19626587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
WTC11_00000554	chr1	+	544	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCGGTCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19758547	19759091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_19758500_19759100
WTC11_00000557	chr1	+	880	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	-71	0	-60	0	multi-exon	FALSE	canonical	3	58	junction_3	14.1656862405839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	NA	False	NA	14	True	TATAAA	-20	NA	20589025	20618903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
WTC11_00000558	chr1	+	783	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	22	junction_2	33.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587368	True	NA	14	True	TATAAA	-20	NA	20589064	20618903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20589284_20604927_20605040_20618451
WTC11_00000560	chr1	+	4108	5	FSM	ENSG00000158828.8	ENST00000492302.1	3821	5	-287	0	-287	0	multi-exon	FALSE	canonical	3	392	junction_1	28.0401497856199	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACGTATGTGCCTTGA	20637829	False	NA	25	True	ATTAAA	-18	NA	20637841	20651316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20639993_20644489_20644673_20645559_20645724_20648504_20649232_20650433
WTC11_00000570	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_5	55.5584719161074	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	21498924	True	NA	22	True	AATAAA	-23	NA	21509422	21578410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
WTC11_00000573	chr1	+	10384	6	FSM	ENSG00000070831.17	ENST00000656825.1	10503	6	0	119	0	-119	multi-exon	FALSE	canonical	3	417	junction_1	57.2293630927341	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCAGTTGGAAGTTGA	22009341	True	NA	NA	False	NA	NA	NA	22052708	22101241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
WTC11_00000579	chr1	+	3108	19	FSM	ENSG00000004487.18	ENST00000465864.2	3039	19	-52	-17	-52	0	multi-exon	FALSE	canonical	3	85	junction_12	729.947486695675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	23019373	False	NA	17	True	AATAAA	-17	NA	23019390	23083689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073273_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
WTC11_00000580	chr1	+	3038	19	FSM	ENSG00000004487.18	ENST00000356634.7	3033	19	-5	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_2	315.200333121651	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	22987775	True	NA	17	True	AATAAA	-17	NA	23019442	23083689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
WTC11_00000581	chr1	+	2810	1	FSM	ENSG00000004487.18	ENST00000602503.1	2810	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCCCTCTCTTTTG	23080750	False	NA	10	True	AATAAA	-10	NA	23080872	23083682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23080900_23083700
WTC11_00000582	chr1	+	668	6	FSM	ENSG00000142676.14	ENST00000374550.8	660	6	0	-8	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	4144.13989146119	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23691716	False	NA	55	True	AATAAA	-23	NA	23691741	23696425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23691830_23692611_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
WTC11_00000583	chr1	+	838	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	-15	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4775.44131573198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23576114	True	NA	55	True	AATAAA	-23	NA	23691805	23696425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
WTC11_00000584	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2732.3762112857	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	23576114	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
WTC11_00000585	chr1	+	886	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	-7	0	0	multi-exon	FALSE	canonical	3	7245	junction_4	2189.55777498562	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23692283	False	NA	55	True	AATAAA	-23	NA	23692305	23696425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
WTC11_00000597	chr1	+	2400	3	FSM	ENSG00000189266.13	ENST00000334351.8	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	2.5	3617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGATTGCTTAATAT	23938631	True	NA	38	True	AATAAA	-35	NA	23959827	23963462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23959999_23960928_23961135_23961439
WTC11_00000600	chr1	+	1697	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	-21	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9444950453169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24414781	True	NA	-22	True	ATTAAA	-1	NA	24415792	24466310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
WTC11_00000601	chr1	+	5381	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	23.0271130167092	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	24414781	True	NA	4	True	ATTAAA	-15	NA	24415792	24472976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
WTC11_00000602	chr1	+	6876	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	59	junction_1	10.7354552767919	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	24502558	False	NA	8	True	AATAAA	-23	NA	24502822	24541040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
WTC11_00000608	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	427.34953035396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	24615545	True	NA	23	True	AATAAA	-31	NA	24643301	24673281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00000609	chr1	+	3710	17	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	2	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	494.476012910384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTCTTACTTAGTAGT	24615553	True	NA	12	True	AATAAA	-20	NA	24643309	24673270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00000610	chr1	+	3706	17	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	7	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	487.469358011352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCACTCTTACTTAGTA	24615558	True	NA	10	True	AATAAA	-18	NA	24643314	24673268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661312_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00000611	chr1	+	3746	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	11	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	453.351242946315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTCTTACTTAGTAGT	24615562	True	NA	12	True	AATAAA	-20	NA	24643318	24673270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661312_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00000612	chr1	+	3774	18	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	391.491248847117	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	24615548	True	NA	23	True	AATAAA	-31	NA	24643304	24673281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00000622	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2230	junction_2	116.105813807923	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	24689218	True	NA	12	True	AATAAA	-19	NA	24745446	24844321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
WTC11_00000627	chr1	+	1108	6	FSM	ENSG00000183726.11	ENST00000480937.5	1102	6	-6	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	438.863805752992	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGCTCCCTGTGT	25325894	True	NA	NA	False	NA	NA	NA	25338316	25361279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25356792_25356854_25360659
WTC11_00000631	chr1	+	290	1	FSM	ENSG00000238084.4	ENST00000419297.2	478	1	63	125	63	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCGCAGAAAGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	25398783	25399073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25398800_25399100
WTC11_00000634	chr1	+	2912	9	FSM	ENSG00000157978.12	ENST00000374338.5	2914	9	0	2	0	0	multi-exon	FALSE	canonical	3	105	junction_8	18.0030379380815	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACGCTCATCAGGTGG	25540945	True	NA	8	True	AATAAA	-20	NA	25543605	25568884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25543787_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
WTC11_00000642	chr1	+	1870	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	3	0	3	0	multi-exon	TRUE	canonical	3	41	junction_5	94.2645508956339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	25815582	True	NA	15	True	ATTAAA	-25	NA	25819931	25832942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
WTC11_00000643	chr1	+	1932	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	-68	4	-4	0	multi-exon	FALSE	canonical	3	16	junction_5	103.113206396336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCATTTGCTGTGTCC	25815585	True	NA	7	True	ATTAAA	-17	NA	25819934	25832934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
WTC11_00000644	chr1	+	3262	6	FSM	ENSG00000117640.18	ENST00000466284.1	3262	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	102.787937035432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTTGCTGTGTCCAT	25821442	False	NA	9	True	ATTAAA	-19	NA	25821522	25832936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
WTC11_00000647	chr1	+	4108	3	FSM	ENSG00000175087.10	ENST00000619836.4	4252	3	144	0	136	0	multi-exon	FALSE	canonical	1	3	junction_1	12.5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAAAACTGAAAA	26111229	False	NA	NA	False	AATAAA	-10	NA	26111308	26125530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26111421_26114291_26114594_26121836
WTC11_00000650	chr1	+	741	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	-43	0	-9	0	multi-exon	FALSE	canonical	3	379	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166317	True	NA	19	True	AATAAA	-19	NA	26169898	26170873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26170184_26170417
WTC11_00000651	chr1	+	872	9	FSM	ENSG00000142675.18	ENST00000481077.6	865	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	21	junction_1	26.1028614331839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGATCCCGATACCG	26176081	True	NA	NA	False	NA	NA	NA	26177476	26183795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26177581_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728
WTC11_00000652	chr1	+	2549	21	FSM	ENSG00000142675.18	ENST00000361530.11	2535	21	-14	0	-7	0	multi-exon	TRUE	canonical	3	78	junction_8	12.6509881037016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26176081	True	NA	13	True	AATAAA	-18	NA	26177476	26189884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
WTC11_00000653	chr1	+	2484	21	NIC	ENSG00000142675.18	novel	2535	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	21.0937787036842	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26176127	True	NA	13	True	AATAAA	-18	NA	26177522	26189884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26177581_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
WTC11_00000656	chr1	+	842	11	FSM	ENSG00000142675.18	ENST00000528281.5	842	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	31.5101570925948	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGCAGAGGACCCGGACG	26181808	False	NA	NA	False	NA	NA	NA	26183203	26188457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26183257_26183345_26183415_26183728_26183831_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441
WTC11_00000658	chr1	+	753	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	214	-32	209	32	multi-exon	FALSE	canonical	3	31	junction_1	7	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAATCATGTCAAAT	26224958	True	NA	NA	False	NA	NA	NA	26225528	26229876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26225704_26227793_26227997_26229501
WTC11_00000660	chr1	+	3937	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	-2	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	50.6650446122584	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228945	True	NA	15	True	AATAAA	-15	NA	26234199	26278808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
WTC11_00000665	chr1	+	4047	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	-81	9	-81	0	multi-exon	TRUE	canonical	3	1527	junction_3	59.4885609919158	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	26273772	True	NA	78	True	AATAAA	-20	NA	26410735	26429719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
WTC11_00000669	chr1	+	1251	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	-16	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	62.9940068415971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	26428029	True	NA	2	True	ACTAAA	-18	NA	26432322	26469373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
WTC11_00000675	chr1	+	3273	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	-16	-12	0	0	multi-exon	FALSE	canonical	3	48	junction_8	55.3634299425171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGCTAACTGCAACG	26428045	True	NA	22	True	AATAGA	-27	NA	26432338	26471306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
WTC11_00000677	chr1	+	3349	9	NIC	ENSG00000117682.17	novel	703	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	57.6319139019346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428096	True	NA	10	True	AATAGA	-15	NA	26432389	26471294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
WTC11_00000680	chr1	+	1439	5	FSM	ENSG00000198830.11	ENST00000466194.1	952	5	-894	407	-128	0	multi-exon	FALSE	canonical	3	9773	junction_1	385.74238488919	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATAACTGTGTACTT	NA	False	NA	NA	False	NA	NA	NA	26472311	26475158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
WTC11_00000691	chr1	+	8595	20	FSM	ENSG00000117713.21	ENST00000324856.13	8595	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	31.2754716136102	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTGTGAAGCTTTTTA	26693414	True	NA	7	True	AATAAA	-21	NA	26696014	26782104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26697541_26729650_26729864_26731151_26731605_26732675_26732793_26760855_26761097_26761383_26761474_26762151_26762320_26762972_26763286_26766220_26766367_26766456_26766567_26767789_26768000_26771118_26771327_26772499_26772633_26772811_26772988_26773345_26773497_26773579_26773718_26773801_26773899_26774328_26775221_26775576_26775708_26779022
WTC11_00000692	chr1	+	7058	19	FSM	ENSG00000117713.21	ENST00000636219.1	7058	19	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	29.426881554536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTTGTGAAGCTTTT	NA	False	NA	5	True	AATAAA	-19	NA	26729656	26782102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26729864_26731151_26731605_26732675_26732793_26760855_26761097_26761383_26761474_26762151_26762320_26762972_26763286_26766220_26766367_26766456_26766567_26767789_26768000_26771118_26771327_26772499_26772633_26772814_26772988_26773345_26773497_26773579_26773718_26773801_26773899_26774328_26775221_26775576_26775708_26779022
WTC11_00000696	chr1	+	4971	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	1	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	47.4856703531591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTATGCCTCCTGTCCTC	26787830	True	NA	NA	False	AATAAA	-8	NA	26788194	26800651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
WTC11_00000697	chr1	+	5055	8	FSM	ENSG00000204160.12	ENST00000374142.9	5045	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	118	junction_1	8.9511143987546	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTCTGGTGGCGCCT	26824202	True	NA	NA	False	AATAAA	-25	NA	26826677	26857604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725
WTC11_00000698	chr1	+	1275	7	FSM	ENSG00000204160.12	ENST00000488397.3	1275	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	63.2920918353066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGCTGTCTGGTGGCGC	NA	False	NA	NA	False	AATAAA	-23	NA	26850361	26857602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725_26853826_26856184_26856263_26856847
WTC11_00000700	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	26862761	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26863100_26864500
WTC11_00000701	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	TRUE	canonical	3	2986	junction_5	88.0943209009525	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	26862550	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
WTC11_00000702	chr1	+	1463	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	21	208	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_2	1247.58894385912	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTTCTGTGTCCTCTC	26862571	True	NA	11	True	ATTAAA	-12	NA	26921763	26946392	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_26921930_26924088_26924167_26934248_26934420_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
WTC11_00000703	chr1	+	607	2	FSM	ENSG00000090273.14	ENST00000484772.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	3114	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTTCCTCCCTGAAC	26945119	False	NA	NA	False	NA	NA	NA	26945134	26946184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26945687_26946129
WTC11_00000706	chr1	+	539	1	FSM	ENSG00000225159.1	ENST00000449818.1	867	1	-23	351	-23	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTTGATGATGAGGA	NA	False	NA	NA	False	NA	NA	NA	27206906	27207445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27206900_27207400
WTC11_00000708	chr1	+	1613	6	FSM	ENSG00000186501.15	ENST00000611517.4	1613	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.4195984289604	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCCTGTCATTGT	27322119	True	NA	7	True	AATAAA	-14	NA	27322144	27336399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
WTC11_00000710	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	118.384495981902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319407	True	NA	8	True	AATAAA	-15	NA	27322246	27336400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
WTC11_00000714	chr1	+	2861	3	FSM	ENSG00000186501.15	ENST00000471456.1	2861	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCCTGTCATTGT	NA	False	NA	7	True	AATAAA	-14	NA	27332345	27336399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27334055_27334150_27334282_27335378
WTC11_00000715	chr1	+	2841	2	FSM	ENSG00000186501.15	ENST00000470223.1	2841	2	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCCTGTCATTGT	NA	False	NA	7	True	AATAAA	-14	NA	27333462	27336399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27334055_27334150
WTC11_00000718	chr1	+	793	4	FSM	ENSG00000142765.18	ENST00000615284.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	25.0199920063936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	27351031	False	NA	NA	False	AATAAA	-23	NA	27351074	27353937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00000719	chr1	+	2155	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	71	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	27391672	True	NA	NA	False	AATAAA	-19	NA	27392603	27395814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27392738_27393793
WTC11_00000725	chr1	+	770	4	FSM	ENSG00000117758.14	ENST00000468761.1	703	4	0	-67	0	67	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATATAACAGGCTAGT	27771607	True	NA	NA	False	AATAAA	-18	NA	27773254	27802106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677
WTC11_00000730	chr1	+	2755	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	-44	2	-43	0	multi-exon	FALSE	canonical	3	44	junction_4	14.1336477952438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGAGAACGGTATCA	27870564	True	NA	16	True	AATAAA	-20	NA	27872499	27886673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
WTC11_00000731	chr1	+	1265	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	-43	-140	-37	0	multi-exon	FALSE	canonical	3	10	junction_2	32.1489588564786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGAGAACGGTATCA	27870570	True	NA	16	True	AATAAA	-20	NA	27872505	27886673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
WTC11_00000732	chr1	+	1676	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	-38	12	-37	0	multi-exon	FALSE	canonical	2	4	junction_3	30.4661697625415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGAGAACGGTATCA	27870570	True	NA	16	True	AATAAA	-20	NA	27872505	27886673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
WTC11_00000742	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4367	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	28179979	True	NA	11	True	AATAAA	-13	NA	28236153	28238098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28236271_28236360
WTC11_00000746	chr1	+	5662	15	NNC	ENSG00000204138.13	novel	6048	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	25.2408803494713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	NA	False	NA	12	True	ATTAAA	-25	NA	28369603	28500364	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533_28498829_28499350
WTC11_00000747	chr1	+	6081	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	-33	0	-3	0	multi-exon	FALSE	canonical	3	61	junction_2	13.2173456053805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	28363472	True	NA	12	True	ATTAAA	-25	NA	28369706	28500364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
WTC11_00000751	chr1	+	2715	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	205.472525359684	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	28505926	True	NA	28	True	NA	NA	NA	28505942	28539196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00000752	chr1	+	2704	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	-18	0	-18	0	multi-exon	FALSE	canonical	2	59	junction_3	291.949902486934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	28505945	False	NA	83	True	NA	NA	NA	28505961	28538968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00000753	chr1	+	3005	13	FSM	ENSG00000180198.17	ENST00000683442.1	2551	13	-67	-387	-4	76	multi-exon	FALSE	canonical	3	59	junction_3	245.339263402063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTCCCAGGTTCAAGC	28505959	False	NA	NA	False	NA	NA	NA	28505975	28539376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00000754	chr1	+	4248	2	FSM	ENSG00000242125.3	ENST00000437681.1	2614	2	-375	-1259	-4	0	multi-exon	FALSE	canonical	3	997	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	28505959	False	NA	25	True	AGTAAA	-17	NA	28505975	28510892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28508161_28508829
WTC11_00000756	chr1	+	2930	11	NIC	ENSG00000180198.17	novel	1577	11	NA	NA	-242	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_2	198.825149314668	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	28517883	False	NA	28	True	NA	NA	NA	28517893	28539196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28518309_28529857_28529940_28530522_28530574_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00000757	chr1	+	2437	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	418	junction_1	74.2978656456979	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	28518112	False	NA	98	True	AATAAA	-14	NA	28518122	28538983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00000768	chr1	+	6362	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	-4	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	9.87452139799728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	28666470	True	NA	11	True	AATAAA	-22	NA	28668779	28719353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
WTC11_00000775	chr1	+	864	3	FSM	ENSG00000116329.12	ENST00000234961.7	9317	3	64	8389	64	-8389	multi-exon	FALSE	canonical	1	2	junction_1	1	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCGCAGTGTGCGCCT	28812079	False	NA	NA	False	NA	NA	NA	28812233	28862878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28812611_28858953_28859304_28862741
WTC11_00000778	chr1	+	6543	22	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_13	64.0472118946166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	NA	False	NA	4	True	AATAAA	-13	NA	28914503	29120038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00000782	chr1	+	6323	19	NIC	ENSG00000159023.22	novel	2937	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_12	46.3758464699295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	28908169	True	NA	4	True	AATAAA	-13	NA	28914561	29120038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00000783	chr1	+	6038	21	FSM	ENSG00000159023.22	ENST00000343067.9	6031	21	-7	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	68.2058648504658	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTGAGGATTGAT	28908169	True	NA	7	True	AATAAA	-16	NA	28914561	29120041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00000785	chr1	+	6379	20	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	44.3703252385291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	28908176	True	NA	4	True	AATAAA	-13	NA	28914568	29120038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29060421_29060485_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00000792	chr1	+	4481	31	FSM	ENSG00000060656.20	ENST00000345512.7	4470	31	-11	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_15	58.4011130030927	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCCCTGGCCTGGGGCA	29232767	True	NA	NA	False	GGGGCT	-14	NA	29236504	29325661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29289682_29289713_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
WTC11_00000794	chr1	+	5544	30	FSM	ENSG00000060656.20	ENST00000428026.6	5550	30	0	6	0	-6	multi-exon	FALSE	canonical	3	94	junction_20	42.2836523170589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGTGTGTCTCACCA	29232811	True	NA	25	True	AATAAA	-26	NA	29236548	29326807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
WTC11_00000797	chr1	+	781	4	FSM	ENSG00000060656.20	ENST00000531385.1	737	4	-44	0	-44	0	multi-exon	FALSE	canonical	3	166	junction_1	8.99382504215469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGTGCACGCCGGCCCC	29283650	False	NA	NA	False	NA	NA	NA	29283678	29304040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_29283977_29284730_29284870_29291868_29292027_29303854
WTC11_00000801	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	229.40460375115	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
WTC11_00000802	chr1	+	2263	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	-6	-552	-6	552	multi-exon	FALSE	canonical	3	72	junction_2	246.86927208545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACAGGCTCCGAGACTG	31288386	True	NA	6	True	ATTAAA	-20	NA	31296975	31365505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
WTC11_00000804	chr1	+	1540	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	-6	0	-6	0	multi-exon	FALSE	canonical	3	40	junction_3	225.216500776968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288386	True	NA	48	True	ACTAAA	-40	NA	31296975	31364953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
WTC11_00000805	chr1	+	1592	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	-24	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	66.7006715995929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288418	True	NA	31	True	ACTAAA	-23	NA	31297007	31364936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
WTC11_00000806	chr1	+	2331	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	-31	-570	-5	553	multi-exon	FALSE	canonical	3	52	junction_1	210.135621901278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGCTCCGAGACTGT	31288387	True	NA	7	True	ATTAAA	-21	NA	31296976	31365506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
WTC11_00000807	chr1	+	1761	9	NIC	ENSG00000121766.16	novel	1730	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	286.107469974134	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288457	True	NA	31	True	ACTAAA	-23	NA	31297046	31364936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_31297214_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
WTC11_00000813	chr1	+	2468	8	FSM	ENSG00000121774.18	ENST00000492989.1	1215	8	0	-1253	0	0	multi-exon	FALSE	canonical	3	39	junction_2	667.953316222819	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	32001206	False	NA	NA	False	AATAAA	-23	NA	32013995	32043877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32014378_32030297_32030423_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
WTC11_00000817	chr1	+	7663	15	NNC	ENSG00000025800.14	novel	7355	14	NA	NA	-89	109	intron_retention	FALSE	canonical	3	10	junction_1	67.6109820810139	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCTGCTCTAAAGTTTT	32107955	False	NA	-63	True	TTTAAA	-39	NA	32107966	32176672	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_32108135_32139754_32139865_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
WTC11_00000818	chr1	+	7355	14	FSM	ENSG00000025800.14	ENST00000373625.8	7355	14	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	22.9029338447768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGCT	32099202	True	NA	15	True	AATAAA	-17	NA	32108055	32176563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32108135_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
WTC11_00000821	chr1	+	5386	10	FSM	ENSG00000084652.16	ENST00000373609.1	5012	10	-374	0	16	0	multi-exon	FALSE	canonical	3	174	junction_1	8.73053390247253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168242	True	NA	9	True	AATAAA	-16	NA	32179690	32198285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
WTC11_00000829	chr1	+	1419	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	-19	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	219.738115733645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	32207674	True	NA	-66	True	AAAAAG	-2	NA	32222404	32231505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
WTC11_00000830	chr1	+	1296	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	-20	0	-20	0	multi-exon	FALSE	canonical	2	16	junction_10	525.025561282496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207654	True	NA	31	True	AATAAA	-32	NA	32222384	32231602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
WTC11_00000831	chr1	+	1163	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	-22	0	-20	0	multi-exon	FALSE	canonical	3	139	junction_4	555.607761262386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207654	True	NA	31	True	AATAAA	-32	NA	32222384	32231602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00000832	chr1	+	1009	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	-22	0	-20	0	multi-exon	FALSE	canonical	3	6	junction_2	645.557381906003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207654	True	NA	31	True	AATAAA	-32	NA	32222384	32231602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00000833	chr1	+	1489	11	FSM	ENSG00000084623.12	ENST00000676837.1	1479	11	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	541.970331291299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207674	True	NA	33	True	AATAAA	-34	NA	32222404	32231604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226104_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00000836	chr1	+	1501	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	-19	0	0	0	multi-exon	FALSE	canonical	3	1560	junction_6	107.150983818784	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207687	True	NA	31	True	AATAAA	-32	NA	32222417	32231602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00000839	chr1	+	1903	12	NIC	ENSG00000182866.17	novel	2099	13	NA	NA	23	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_7	56.6088507520783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTTGCTGTCCACTC	32270787	True	NA	15	True	AATAAA	-22	NA	32274154	32286165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
WTC11_00000847	chr1	+	2409	7	FSM	ENSG00000116478.12	ENST00000476391.5	2409	7	0	0	0	0	multi-exon	TRUE	canonical	3	1149	junction_2	32.9515637801236	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTCCTATGTGTCCC	32329457	False	NA	25	True	AATAAA	-26	NA	32329479	32333635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
WTC11_00000850	chr1	+	7049	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	28	0	26	0	multi-exon	FALSE	canonical	3	14	junction_1	2.54950975679639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	32538599	True	NA	12	True	AATAAA	-15	NA	32539454	32605941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
WTC11_00000851	chr1	+	7946	12	FSM	ENSG00000162521.19	ENST00000414241.7	1788	12	0	-6158	0	0	multi-exon	FALSE	canonical	3	265	junction_1	449.70592778793	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	32651070	False	NA	NA	False	AATAAA	-16	NA	32651141	32686211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651916_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
WTC11_00000852	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1658	junction_9	108.727424749058	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	32623217	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
WTC11_00000853	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	520.603384831025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	32623243	True	NA	26	True	AATAAA	-21	NA	32651233	32680657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
WTC11_00000858	chr1	+	5369	7	FSM	ENSG00000162522.11	ENST00000373481.7	5293	7	-76	0	-74	0	multi-exon	FALSE	canonical	3	32	junction_5	12.2292908852294	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	32747178	True	NA	21	True	ATTAAA	-14	NA	32753944	32774970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
WTC11_00000860	chr1	+	5309	7	FSM	ENSG00000162522.11	ENST00000373480.1	5294	7	-15	0	-15	0	multi-exon	FALSE	canonical	2	3	junction_1	20.7424685126915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	32764657	True	NA	21	True	ATTAAA	-14	NA	32765651	32774970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
WTC11_00000864	chr1	+	4309	7	NIC	ENSG00000116497.18	novel	706	3	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	96.300599975055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	32812711	True	NA	20	True	AATAAA	-17	NA	32817717	32858875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32817847_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32853078_32853167_32855923
WTC11_00000865	chr1	+	4329	2	FSM	ENSG00000116497.18	ENST00000475486.1	665	2	-970	-2694	-955	4	multi-exon	FALSE	canonical	3	264	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGGCGGTCTGTCG	NA	False	NA	24	True	AATAAA	-21	NA	32851793	32858879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32853167_32855923
WTC11_00000866	chr1	+	3404	1	FSM	ENSG00000279179.1	ENST00000624339.1	3448	1	-20	64	-20	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAATTATTCCATTATA	NA	False	NA	NA	False	AAAACA	-38	NA	33162830	33166234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33162800_33166200
WTC11_00000867	chr1	+	3187	9	FSM	ENSG00000160094.15	ENST00000539719.6	3187	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.7211355350035	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGTGGTGTTTGGCGT	33256416	False	NA	13	True	AATAAA	-17	NA	33256491	33300719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33256655_33270486_33270613_33276099_33276164_33276347_33276595_33280123_33280458_33281586_33281812_33294936_33295016_33295146_33295306_33298929
WTC11_00000868	chr1	+	712	4	FSM	ENSG00000160094.15	ENST00000483388.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.4742552876052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCCTCGGGCGAGACT	33256357	True	NA	NA	False	NA	NA	NA	33256544	33280414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33256655_33276099_33276164_33276347_33276595_33280123
WTC11_00000869	chr1	+	3381	8	NIC	ENSG00000160094.15	novel	3187	9	NA	NA	-320	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11.2176973882289	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGTGGTGTTTGGCGT	33256117	True	NA	13	True	AATAAA	-17	NA	33256171	33300719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_33256655_33276099_33276164_33276347_33276595_33280123_33280458_33281586_33281812_33294936_33295016_33295146_33295306_33298929
WTC11_00000872	chr1	+	2114	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	22	0	22	0	multi-exon	FALSE	canonical	3	20	junction_1	9.41039614232874	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166889	False	NA	8	True	GATAAA	-19	NA	34166904	34219131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
WTC11_00000882	chr1	+	7366	30	FSM	ENSG00000146463.12	ENST00000314607.11	7366	30	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	46.3565512675621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAATTTTTTTTATG	35263711	True	NA	NA	False	AGTAAA	-27	NA	35268708	35422058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00000883	chr1	+	7635	31	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	0	207	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	65.1429197994686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTAATGAAATTGTAAG	35263711	True	NA	NA	False	NA	NA	NA	35268708	35422265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00000885	chr1	+	2040	3	FSM	ENSG00000146463.12	ENST00000482131.1	640	3	0	-1400	0	1400	multi-exon	FALSE	canonical	3	257	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTTTGAGTTATG	35361693	True	NA	NA	False	TATAAA	-13	NA	35361716	35372253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35361790_35370028_35370114_35370371
WTC11_00000886	chr1	+	7666	12	ISM	ENSG00000146463.12	ENST00000457946.1	6003	24	32453	-1155	1478	1155	3prime_fragment	FALSE	canonical	3	182	junction_8	25.0249462313967	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGTCTGAATTTTTAC	35394138	False	NA	3	True	AATAAA	-14	NA	35394157	35423213	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00000888	chr1	+	3705	7	FSM	ENSG00000020129.16	ENST00000373243.7	3698	7	-7	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	29.4604254325471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	35553098	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
WTC11_00000889	chr1	+	3510	9	NNC	ENSG00000020129.16	novel	3433	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	104.701883340272	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	35553103	True	NA	13	True	AATAAA	-13	NA	35557796	35566772	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35562791_35562881_35563201_35563427_35563766_35563910_35565226
WTC11_00000897	chr1	+	3512	7	NIC	ENSG00000126070.20	novel	3599	21	NA	NA	-112	3001	intron_retention	FALSE	canonical	3	16	junction_6	41.2219601668819	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCATGGCTCATGCCT	35930594	False	NA	40	True	ATTAAA	-15	NA	35930605	35986410	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620_35982713_35984469
WTC11_00000905	chr1	+	3397	17	FSM	ENSG00000116871.16	ENST00000474796.2	3372	17	-34	9	-34	0	multi-exon	TRUE	canonical	3	262	junction_6	41.9106191793918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	36151747	True	NA	6	True	AATAAA	-7	NA	36156125	36180840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
WTC11_00000906	chr1	+	3328	17	FSM	ENSG00000116871.16	ENST00000373151.6	3324	17	-4	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	79.7738013071961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	36151819	True	NA	6	True	AATAAA	-7	NA	36156197	36180840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179511_36179558_36179665_36179757_36179873_36180068_36180247
WTC11_00000914	chr1	+	5952	13	FSM	ENSG00000214193.11	ENST00000505871.7	5952	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.36120339557783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTGAACATGTACAG	36306409	True	NA	NA	False	NA	NA	NA	36307109	36324977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
WTC11_00000917	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.75704873412037	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	37474021	True	NA	14	True	AATAAA	-26	NA	37474579	37484377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
WTC11_00000924	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	TRUE	canonical	3	430	junction_4	29.8332816055831	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	37685250	True	NA	33	True	AATAAA	-27	NA	37692515	37709719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
WTC11_00000925	chr1	+	2337	4	FSM	ENSG00000185090.15	ENST00000397631.7	2327	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	21	junction_3	10.1980390271856	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATTCCTTTTGCTCT	37793856	False	NA	10	True	ATTAAA	-20	NA	37793872	37801133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37794733_37795736_37795847_37796743_37796821_37799843
WTC11_00000926	chr1	+	2631	4	FSM	ENSG00000185090.15	ENST00000373045.11	2640	4	9	0	9	0	multi-exon	FALSE	canonical	3	19	junction_3	11.115554667022	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATTCCTTTTGCTCT	37793839	False	NA	10	True	ATTAAA	-20	NA	37793855	37801133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37794733_37795736_37795847_37796743_37796821_37799566
WTC11_00000929	chr1	+	1329	3	FSM	ENSG00000197982.14	ENST00000373042.5	1329	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	240.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGACCGACGTTTCCTT	37803824	True	NA	29	True	ATTAAA	-20	NA	37807789	37809454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37808440_37808530_37808733_37808977
WTC11_00000933	chr1	+	708	3	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	36	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	38423773	True	NA	12	True	AATAAA	-20	NA	38425431	38430741	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427538_38427623_38430358
WTC11_00000937	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_2	102.196807680084	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	38948954	True	NA	44	True	ATTAAA	-19	NA	38991275	39006059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
WTC11_00000939	chr1	+	516	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	-21	0	0	multi-exon	FALSE	canonical	3	2012	junction_1	2337	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGACTTTCTTTTCTTTT	38898454	True	NA	42	True	AATAAA	-38	NA	39026349	39034636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39026403_39028722_39028941_39034391
WTC11_00000942	chr1	+	17416	93	NIC	ENSG00000127603.32	novel	14496	71	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_64	135.568631517792	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	39157784	True	NA	NA	False	ATTAAA	-21	NA	39158870	39486987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39159021_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645_39324735_39327217_39327354_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00000948	chr1	+	8322	43	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	112.769990962481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	39414013	False	NA	NA	False	ATTAAA	-21	NA	39414029	39486987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39465094_39465113_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00000956	chr1	+	4660	10	FSM	ENSG00000084072.17	ENST00000495526.5	4651	10	-9	0	0	0	multi-exon	FALSE	canonical	1	28	junction_4	382.725540702698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734480	True	NA	32	True	AATAAA	-30	NA	39738878	39753716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39742032_39743215_39743298_39743823_39743925_39745374_39748768_39748902_39749089_39752909_39753053_39753286
WTC11_00000959	chr1	+	1217	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	-4	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	320.287370965513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734505	True	NA	32	True	AATAAA	-30	NA	39738903	39753716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
WTC11_00000969	chr1	+	3254	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	-662	0	-142	0	multi-exon	FALSE	canonical	3	271	junction_2	620.95777276362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	40040022	True	NA	17	True	AATAAA	-10	NA	40040090	40072641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
WTC11_00000970	chr1	+	2626	13	FSM	ENSG00000131236.18	ENST00000372805.8	2626	13	0	0	0	0	multi-exon	FALSE	canonical	3	1289	junction_1	302.641461413777	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTTTACCTGTGAT	40000137	True	NA	24	True	AATAAA	-17	NA	40040728	40072648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059336_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
WTC11_00000971	chr1	+	3134	13	FSM	ENSG00000131236.18	ENST00000372792.7	2629	13	-638	133	-142	0	multi-exon	FALSE	canonical	3	407	junction_1	538.214041220281	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGCAACTTTTTTTT	40040022	True	NA	-78	True	NA	NA	NA	40040090	40072515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059333_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
WTC11_00000979	chr1	+	540	4	FSM	ENSG00000084073.10	ENST00000472583.1	537	4	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	315.410138637862	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGGTTATGCTGGCTT	40253183	True	NA	NA	False	NA	NA	NA	40258235	40267836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40258395_40259349_40259533_40260838_40260986_40267785
WTC11_00000983	chr1	+	5291	5	Fusion	ENSG00000187801.15_ENSG00000260920.2	novel	2109	6	NA	NA	-7	207	multi-exon	FALSE	canonical	3	24	junction_1	5.1478150704935	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCACTGCGGCCTCAA	40449449	True	NA	83	True	NA	NA	NA	40450094	40466974	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_40450176_40450655_40451089_40456944_40457072_40457343_40457440_40462420
WTC11_00000990	chr1	+	1897	4	FSM	ENSG00000164002.12	ENST00000358527.6	1892	4	-5	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508276	True	NA	3	True	AATAAA	-17	NA	40508735	40516036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40508878_40509450_40509626_40509732_40509791_40514514
WTC11_00000991	chr1	+	2578	2	FSM	ENSG00000164002.12	ENST00000372703.1	2567	2	-11	0	-5	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAACTGATGGTTTT	40508276	True	NA	4	True	AATAAA	-18	NA	40508735	40516037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40509791_40514514
WTC11_00000992	chr1	+	1881	4	FSM	ENSG00000164002.12	ENST00000432259.6	1878	4	-3	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	13.2748718344933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508304	True	NA	3	True	AATAAA	-17	NA	40508763	40516036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40508890_40509450_40509626_40509732_40509791_40514514
WTC11_00000995	chr1	+	895	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	133	0	-133	multi-exon	FALSE	canonical	3	14	junction_4	16.1148223694833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGCAAATGAAGGTGGACA	40530791	True	NA	NA	False	NA	NA	NA	40531662	40544904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
WTC11_00001000	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	80.8580527304363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	40689427	True	NA	16	True	AATAAA	-14	NA	40691742	40771601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
WTC11_00001003	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	92.6216250780495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	40708136	True	NA	18	True	AATAAA	-16	NA	40709356	40771603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
WTC11_00001005	chr1	+	2158	10	FSM	ENSG00000066136.21	ENST00000308733.9	2158	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_7	114.638993215363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	40738816	True	NA	18	True	AATAAA	-16	NA	40738837	40771603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770396
WTC11_00001011	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	100.613120416773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	40972561	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001013	chr1	+	2950	20	FSM	ENSG00000171793.16	ENST00000649124.1	2947	20	-3	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	128.304843883576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAGTAAGGCAGAAC	40972591	True	NA	NA	False	NA	NA	NA	40979717	41012539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40980885_40981044_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001014	chr1	+	2878	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	-23	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.4841018355912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	40972591	True	NA	NA	False	AATAAA	-3	NA	40979717	41012546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001015	chr1	+	4006	19	FSM	ENSG00000171793.16	ENST00000648020.1	4006	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	97.6781689598962	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGAGACATGCTTTG	40972591	True	NA	NA	False	AATAAA	-11	NA	40979717	41012554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_40999829_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001016	chr1	+	4009	18	FSM	ENSG00000171793.16	ENST00000648801.1	4009	18	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_10	25.8400724178659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAATAGGCATAGCT	40972630	True	NA	NA	False	NA	NA	NA	40979756	41012470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001017	chr1	+	5325	9	FSM	ENSG00000171793.16	ENST00000486889.2	5325	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	137.077475812039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	40993833	False	NA	NA	False	AATAAA	-3	NA	40993852	41012546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00001037	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	84	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	42765295	True	NA	26	True	CATAAA	-42	NA	42767305	42775759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42767391_42774736_42774869_42775208
WTC11_00001038	chr1	+	821	4	FSM	ENSG00000164008.17	ENST00000685942.1	896	4	34	41	6	-28	multi-exon	FALSE	canonical	3	31	junction_1	72.6192505851965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTCCAGAGAGAACTGT	42765301	True	NA	-2	True	CATAAA	-14	NA	42767311	42775731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42767391_42773562_42773650_42774736_42774869_42775208
WTC11_00001039	chr1	+	1573	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	4	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843414	True	NA	NA	False	AGTAAA	-16	NA	42846612	42852477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42846658_42850949
WTC11_00001040	chr1	+	1870	4	FSM	ENSG00000164011.18	ENST00000651192.1	1874	4	0	4	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.2659863237109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACCCGTGTACTTAT	42843414	True	NA	NA	False	AGTAAA	-12	NA	42846612	42852473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
WTC11_00001042	chr1	+	2053	2	FSM	ENSG00000164011.18	ENST00000372503.2	993	2	-341	-719	-77	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACCCGTGTACTTAT	42846015	False	NA	NA	False	AGTAAA	-12	NA	42849213	42852473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42849743_42850949
WTC11_00001044	chr1	+	3063	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	12	4	-12	multi-exon	FALSE	canonical	2	7	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCAACAAGAGCAAAAAAAA	42958688	True	NA	NA	False	NA	NA	NA	42959103	42976416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42959578_42970248_42970395_42973973
WTC11_00001046	chr1	+	1741	3	ISM	ENSG00000179178.11	ENST00000432792.6	1850	4	609	0	-312	0	3prime_fragment	FALSE	canonical	3	171	junction_1	24	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	43269493	True	NA	28	True	AATAAA	-29	NA	43270633	43274002	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_43270794_43272183_43272340_43272577
WTC11_00001047	chr1	+	1696	3	NNC	ENSG00000179178.11	novel	567	3	NA	NA	201	8	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	86	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCTCAGAGACCCTTC	43271122	False	NA	36	True	AATAAA	-37	NA	43271146	43274010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43271254_43272183_43272340_43272577
WTC11_00001062	chr1	+	1902	6	FSM	ENSG00000142949.17	ENST00000372405.1	1962	6	0	60	0	-60	multi-exon	FALSE	canonical	3	615	junction_5	39.4542773346566	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCCACTGCACTCCAGCT	43538094	True	NA	NA	False	NA	NA	NA	43538197	43580018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809
WTC11_00001065	chr1	+	4836	25	FSM	ENSG00000142949.17	ENST00000414879.5	4836	25	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	265.234327084352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAAACCA	43591436	False	NA	NA	False	NA	NA	NA	43591449	43622842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43591554_43591811_43591949_43592456_43592602_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43612767_43612801_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
WTC11_00001079	chr1	+	405	3	FSM	ENSG00000117407.17	ENST00000472435.1	402	3	-3	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCGCAGCCTTCTCGGCC	43934173	False	NA	NA	False	NA	NA	NA	43934194	43936345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43934261_43935654_43935717_43936068
WTC11_00001080	chr1	+	471	3	FSM	ENSG00000117407.17	ENST00000479128.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCAGCCTTCTCGGCCC	43934173	False	NA	NA	False	NA	NA	NA	43934194	43936346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43934261_43935589_43935717_43936068
WTC11_00001084	chr1	+	355	2	FSM	ENSG00000117408.11	ENST00000480902.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACCTGGCACACACCC	NA	False	NA	NA	False	NA	NA	NA	43957108	43957549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43957316_43957401
WTC11_00001093	chr1	+	2416	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	-2	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	145.978902585271	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966058	True	NA	12	True	AATAAA	-15	NA	43970007	43973369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
WTC11_00001103	chr1	+	1665	7	FSM	ENSG00000117410.14	ENST00000473485.5	1664	7	-1	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_6	74.5490144505986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCAGCTTCTGTTGCC	43966154	True	NA	5	True	AATAAA	-18	NA	43974970	43978292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
WTC11_00001104	chr1	+	2432	6	FSM	ENSG00000117410.14	ENST00000468183.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	59.4286126373484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	43966154	True	NA	8	True	AATAAA	-21	NA	43974970	43978295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
WTC11_00001108	chr1	+	3443	6	FSM	ENSG00000117411.18	ENST00000481924.2	3443	6	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	80.9997530860434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCACGGTGTACTTG	43975646	True	NA	NA	False	AATGAA	-33	NA	43979236	43987769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516
WTC11_00001109	chr1	+	2004	7	FSM	ENSG00000117411.18	ENST00000309519.8	2004	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	241.812886799323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCTTGTCTGTTTGGG	43979803	True	NA	16	True	AGTAAA	-16	NA	43979935	43991170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43980047_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
WTC11_00001111	chr1	+	1680	8	FSM	ENSG00000159214.13	ENST00000490563.5	1659	8	-21	0	-3	0	multi-exon	FALSE	canonical	2	8	junction_1	39.5536318928915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991512	True	NA	14	True	ATTAAA	-18	NA	43991644	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43991747_43991846_43992388_43992522_43992640_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
WTC11_00001119	chr1	+	1555	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	117.432363511938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208747	True	NA	25	True	AATAGA	-23	NA	44213444	44220681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
WTC11_00001121	chr1	+	1622	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.023551407888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208790	True	NA	17	True	AATAGA	-15	NA	44213487	44220673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
WTC11_00001122	chr1	+	1569	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.697468928337	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208773	True	NA	25	True	AATAGA	-23	NA	44213470	44220681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
WTC11_00001124	chr1	+	4552	7	FSM	ENSG00000178028.14	ENST00000488433.5	4552	7	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	24.4517665801244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44214776	False	NA	25	True	AATAGA	-23	NA	44214832	44220681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
WTC11_00001128	chr1	+	1565	3	NIC	ENSG00000187147.18	novel	3042	15	NA	NA	16	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTTAAATCTACTTT	44402256	False	NA	NA	False	AATAAA	-19	NA	44405270	44419866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44405531_44411980_44412723_44419303
WTC11_00001132	chr1	+	876	4	FSM	ENSG00000187147.18	ENST00000488865.2	860	4	-16	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	159.403750130151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	44625260	True	NA	19	True	ATTAAA	-22	NA	44631967	44636495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029
WTC11_00001135	chr1	+	2066	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	179	junction_1	149.6094916775	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625260	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00001136	chr1	+	2059	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	196	junction_6	130.489118320265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625263	True	NA	NA	False	ATTAAA	-16	NA	44631970	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00001137	chr1	+	1979	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	179	junction_1	147.323623360274	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625269	True	NA	NA	False	ATTAAA	-16	NA	44631976	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00001140	chr1	+	936	10	FSM	ENSG00000187147.18	ENST00000475378.5	916	10	-20	0	0	0	multi-exon	FALSE	canonical	1	196	junction_5	122.810704483781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTGCCCCCAGCCT	44625527	False	NA	NA	False	NA	NA	NA	44632234	44650808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00001141	chr1	+	3835	6	FSM	ENSG00000187147.18	ENST00000480686.5	3835	6	0	0	0	0	multi-exon	FALSE	canonical	1	196	junction_2	142.779550356485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44643083	False	NA	NA	False	ATTAAA	-16	NA	44643131	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
WTC11_00001148	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4948.02006463191	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759519	True	NA	52	True	AATATA	-21	NA	44775572	44778779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
WTC11_00001149	chr1	+	1115	5	FSM	ENSG00000142937.12	ENST00000485390.5	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	12478	junction_1	500.554380162635	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759582	False	NA	52	True	AATATA	-21	NA	44775635	44778779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
WTC11_00001151	chr1	+	2795	15	FSM	ENSG00000173846.13	ENST00000372201.5	2340	15	-459	4	-459	-4	multi-exon	TRUE	canonical	3	24	junction_11	8.58362227900153	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGGACTCCCCCTCAC	44799793	True	NA	3	True	AATAAA	-10	NA	44799917	44805986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44804649_44804780_44805265_44805380_44805486
WTC11_00001152	chr1	+	761	5	FSM	ENSG00000173846.13	ENST00000476731.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	3.69966214673719	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGAGGTCTCCGGTTTGG	44801054	False	NA	NA	False	NA	NA	NA	44801633	44803621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44801752_44801844_44801933_44802759_44802856_44802954_44803392_44803599
WTC11_00001165	chr1	+	1199	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	-6	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	80.2493029083988	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005249	True	NA	15	True	AATAAA	-16	NA	45012247	45015575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
WTC11_00001166	chr1	+	1244	10	NIC	ENSG00000126088.14	novel	1335	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	412.374724710726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTATTGTGTAGTTTT	45005268	True	NA	10	True	AATAAA	-11	NA	45012266	45015570	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013574_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
WTC11_00001176	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	37.1977616179758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	45339083	True	NA	18	True	NA	NA	NA	45340220	45343964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
WTC11_00001177	chr1	+	1804	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	30.1979861472075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339133	False	NA	27	True	NA	NA	NA	45340270	45343973	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45340323_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
WTC11_00001179	chr1	+	4623	4	FSM	ENSG00000132763.15	ENST00000401061.9	5049	4	16	410	16	-410	multi-exon	FALSE	canonical	2	8	junction_3	3.09120616516523	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTCTAATAACTTCATT	45498393	True	NA	NA	False	NA	NA	NA	45500315	45512972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795
WTC11_00001180	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_1	506.487687686263	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
WTC11_00001181	chr1	+	861	7	FSM	ENSG00000117448.14	ENST00000434299.5	840	7	-21	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	569.193191182826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGGTGGCTAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	45550782	45568068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981
WTC11_00001182	chr1	+	1378	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	-18	0	-18	0	multi-exon	FALSE	canonical	3	320	junction_1	409.810465073735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550764	45570048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
WTC11_00001183	chr1	+	1109	7	NIC	ENSG00000117448.14	novel	1407	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	162	junction_1	659.476560109101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCCATATTGCTTGCTT	45538057	True	NA	19	True	AATAAA	-9	NA	45550825	45570041	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45551156_45566568_45566689_45566868_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
WTC11_00001184	chr1	+	1203	8	NIC	ENSG00000117448.14	novel	1407	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	264	junction_5	479.47501052118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATATTGCTTGCTTGTCT	45538057	True	NA	23	True	AATAAA	-13	NA	45550825	45570045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
WTC11_00001185	chr1	+	1429	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	-22	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	203.119692238345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45538035	True	NA	27	True	AATAAA	-17	NA	45550803	45570049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
WTC11_00001186	chr1	+	1096	9	NIC	ENSG00000117448.14	novel	1360	10	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	3	264	junction_6	556.276221292084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGCATCCATATTGCT	45538066	True	NA	14	True	AATAAA	-4	NA	45550834	45570036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
WTC11_00001189	chr1	+	667	5	FSM	ENSG00000117448.14	ENST00000497973.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	603.035394898177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45566851	False	NA	27	True	AATAAA	-17	NA	45566868	45570049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
WTC11_00001190	chr1	+	948	4	FSM	ENSG00000117448.14	ENST00000473038.5	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	692.679018176689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45567519	False	NA	27	True	AATAAA	-17	NA	45567548	45570049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45568178_45568926_45569000_45569142_45569230_45569890
WTC11_00001192	chr1	+	874	10	FSM	ENSG00000132780.17	ENST00000437901.6	874	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	629.785148549355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACTCTCAGTATGATGA	NA	False	NA	NA	False	NA	NA	NA	45583845	45615131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45583913_45584107_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012
WTC11_00001193	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_3	48.1404196076436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	45547889	True	NA	104	True	GGGGCT	-15	NA	45584040	45606680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
WTC11_00001194	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_5	518.28739269692	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	45547889	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
WTC11_00001197	chr1	+	2698	16	NIC	ENSG00000132780.17	novel	3225	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	759.567742571757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45583943	False	NA	14	True	AATAAA	-14	NA	45583994	45618247	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
WTC11_00001199	chr1	+	1056	5	FSM	ENSG00000132780.17	ENST00000470768.5	1036	5	-20	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	512.087089761107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGAGGCTGGAT	45547889	True	NA	NA	False	NA	NA	NA	45584040	45607972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45604935_45605017_45606481_45606592_45607320
WTC11_00001204	chr1	+	1562	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	-24	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	621.329572666409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45547889	True	NA	14	True	AATAAA	-14	NA	45584040	45618247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
WTC11_00001205	chr1	+	3659	9	FSM	ENSG00000132780.17	ENST00000481782.1	3659	9	0	0	0	0	multi-exon	FALSE	canonical	3	1750	junction_1	245.316122584717	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTGAGGCTTTGATGG	45610515	False	NA	11	True	AATAAA	-11	NA	45610553	45618244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
WTC11_00001209	chr1	+	5782	29	NNC	ENSG00000086015.23	novel	5737	29	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	canonical	3	40	junction_27	30.7432380154314	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	45800606	True	NA	23	True	AATATA	-16	NA	45803563	46036122	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032405_46032595_46032719_46033801_46033939_46034075_46034267_46034537
WTC11_00001210	chr1	+	5737	29	FSM	ENSG00000086015.23	ENST00000361297.7	5737	29	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	18.601178095234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	45800654	True	NA	23	True	AATATA	-16	NA	45803611	46036122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032405_46032595_46032719_46033801_46033939_46034072_46034267_46034537
WTC11_00001211	chr1	+	859	4	FSM	ENSG00000086015.23	ENST00000467367.5	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	17.6131264181639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCTTGCAAAGGGGACA	NA	False	NA	NA	False	AAGAAA	-22	NA	46021964	46024364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46022083_46022909_46022972_46023232_46023319_46023771
WTC11_00001213	chr1	+	599	3	FSM	ENSG00000086015.23	ENST00000477968.1	900	3	301	0	301	0	multi-exon	FALSE	canonical	3	182	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACTGGTTCAAATTCCTA	NA	False	NA	NA	False	NA	NA	NA	46029465	46030502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46029568_46029830_46029954_46030128
WTC11_00001215	chr1	+	819	7	FSM	ENSG00000085999.13	ENST00000493985.5	810	7	-9	0	3	0	multi-exon	FALSE	canonical	3	28	junction_1	127.285440382368	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGGAGCCCTAACAAAGA	46242833	True	NA	NA	False	AATAGA	-12	NA	46247690	46261015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726
WTC11_00001216	chr1	+	709	7	FSM	ENSG00000085999.13	ENST00000463715.5	718	7	9	0	2	0	multi-exon	FALSE	canonical	2	7	junction_5	164.506754336174	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGTCTGGTCATATG	46242839	True	NA	NA	False	NA	NA	NA	46247696	46261358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260858_46261016_46261260
WTC11_00001224	chr1	+	1467	10	FSM	ENSG00000085999.13	ENST00000661701.1	1467	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	164.728733242126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTGAGAGCAGTGT	NA	False	NA	21	True	AATAAA	-14	NA	46270658	46278472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46270786_46271367_46271443_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
WTC11_00001228	chr1	+	537	4	FSM	ENSG00000173660.12	ENST00000311672.10	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	5722	junction_2	806.007581988049	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204101	True	NA	18	True	AATAAA	-19	NA	46303697	46316776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46303821_46309100_46309128_46310154_46310317_46316551
WTC11_00001229	chr1	+	747	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	-73	0	-62	0	multi-exon	FALSE	canonical	3	161	junction_2	3267.92895998368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204039	True	NA	18	True	AATAAA	-19	NA	46303635	46316776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
WTC11_00001236	chr1	+	527	3	FSM	ENSG00000117480.16	ENST00000493636.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	15.5	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCAGAGCCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	46410051	46411651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46410498_46410813_46410855_46411611
WTC11_00001246	chr1	+	2857	23	ISM	ENSG00000117859.19	ENST00000371714.5	3352	26	39927	0	-3	0	3prime_fragment	FALSE	canonical	3	99	junction_4	194.000127800929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51614205	True	NA	20	True	CATAAA	-29	NA	51617105	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001248	chr1	+	2869	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51729705	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001249	chr1	+	2999	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	-109	-680	99	0	multi-exon	FALSE	canonical	3	334	junction_5	98.2993387566773	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51729698	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001250	chr1	+	2728	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	-7	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	125.149528293689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721684	True	NA	20	True	CATAAA	-29	NA	51729807	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001254	chr1	+	2777	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	-22	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	104.851563724689	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721758	True	NA	20	True	CATAAA	-29	NA	51729881	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001255	chr1	+	3375	15	FSM	ENSG00000117859.19	ENST00000475697.5	3375	15	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_3	54.5686704613404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51759623	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00001257	chr1	+	5288	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	-85	-4409	-13	848	multi-exon	FALSE	canonical	3	329	junction_3	441.67550305626	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTGCAGCCATATTT	52056158	False	NA	NA	False	TATAAA	-19	NA	52056185	52091564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
WTC11_00001258	chr1	+	5709	7	FSM	ENSG00000134717.18	ENST00000477828.6	892	7	0	-4817	0	848	multi-exon	FALSE	canonical	2	21	junction_2	586.039935120087	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTGCAGCCATATTT	52037557	True	NA	NA	False	TATAAA	-19	NA	52056198	52091564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52059834_52059902_52060427_52060660_52064824_52064939_52083339_52083542_52086111_52086172_52086711
WTC11_00001259	chr1	+	2352	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	-117	2298	-21	0	multi-exon	FALSE	canonical	3	1199	junction_1	85.5724254652163	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	52056150	False	NA	42	True	NA	NA	NA	52056177	52088418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
WTC11_00001260	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	480.551245966546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	52037662	True	NA	42	True	NA	NA	NA	52056303	52088418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
WTC11_00001261	chr1	+	1442	8	NNC	ENSG00000157077.16	novel	5148	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.74664220738176	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	NA	False	NA	2	True	AATAAA	-14	NA	52295894	52346634	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_52295978_52303820_52303926_52332767_52332918_52334685_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
WTC11_00001270	chr1	+	1308	4	FSM	ENSG00000116171.19	ENST00000408941.7	1298	4	-10	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	365.141372925915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTGTGTATGTTCT	53009245	True	NA	21	True	ATTAAA	-23	NA	53014927	53051617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53015044_53027968_53028072_53047857_53047938_53050608
WTC11_00001277	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	24.4182308941496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	53191783	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
WTC11_00001279	chr1	+	1730	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	-3	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	51.0138036541612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942417	True	NA	23	True	AATAAA	-19	NA	53946349	53968168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
WTC11_00001287	chr1	+	909	3	FSM	ENSG00000243725.7	ENST00000486621.1	549	3	-54	-306	-50	306	multi-exon	FALSE	canonical	3	251	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTTGAGTTAAAAATAT	54713557	True	NA	NA	False	NA	NA	NA	54715810	54718073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54716020_54716599_54716718_54717491
WTC11_00001298	chr1	+	5975	37	ISM	ENSG00000132849.22	ENST00000642238.2	8621	44	-3	45726	0	794	5prime_fragment	FALSE	canonical	3	61	junction_10	11.3956280873927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTTTTTTTTTTCATT	61739043	True	NA	NA	False	AATAAA	-20	NA	61742476	62118189	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
WTC11_00001299	chr1	+	6261	35	FSM	ENSG00000132849.22	ENST00000484562.5	5448	35	-52	-761	-52	761	multi-exon	FALSE	canonical	3	61	junction_10	11.6829882535622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCAACCATCTTGTTAA	61738991	True	NA	NA	False	NA	NA	NA	61742424	62115686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052
WTC11_00001301	chr1	+	8676	44	FSM	ENSG00000132849.22	ENST00000642238.2	8621	44	-55	0	-52	0	multi-exon	FALSE	canonical	2	7	junction_42	27.2054459600725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGGAGTTTTATTATA	61738991	True	NA	4	True	AATAAA	-17	NA	61742424	62163915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131_62117219_62121180_62121296_62123020_62123059_62127971_62128095_62128840_62128946_62148283_62148391_62153357_62153482_62160907
WTC11_00001305	chr1	+	1754	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	0	46557	0	0	5prime_fragment	FALSE	canonical	3	4	junction_1	28.1120970402423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCCTAGATTTTTCTC	61951989	True	NA	13	True	AATAAA	-25	NA	61952052	62117393	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
WTC11_00001307	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	83.1504660239496	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	62150889	True	NA	22	True	ATTAAA	-16	NA	62194848	62212328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
WTC11_00001308	chr1	+	915	5	FSM	ENSG00000162607.13	ENST00000452143.5	893	5	-23	1	-23	-1	multi-exon	FALSE	canonical	3	27	junction_1	96.6860253604418	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGCCTATAATATAATT	62436259	False	NA	NA	False	NA	NA	NA	62436273	62443319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158
WTC11_00001309	chr1	+	3510	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	-3	0	3	0	multi-exon	FALSE	canonical	3	27	junction_1	77.792090696934	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	62436286	False	NA	78	True	TATAAA	-24	NA	62436300	62451802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
WTC11_00001310	chr1	+	4348	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	-748	2	3	0	multi-exon	FALSE	canonical	3	216	junction_4	16.7760990698076	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	62436286	False	NA	78	True	TATAAA	-24	NA	62436300	62451802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
WTC11_00001312	chr1	+	2897	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	-10	3	-7	-3	multi-exon	FALSE	canonical	3	79	junction_1	44.2809213996276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAAGTTTTCTTTAGTCT	62782052	True	NA	0	True	AATAAA	-12	NA	62784124	62865510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
WTC11_00001316	chr1	+	1822	15	FSM	ENSG00000088035.18	ENST00000647818.1	1841	15	19	0	-9	0	multi-exon	FALSE	canonical	1	19	junction_7	72.8532561988516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGGAACCACAGGAAAG	63365058	True	NA	-70	True	TATAAA	-20	NA	63367593	63437126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411254_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
WTC11_00001318	chr1	+	2033	15	FSM	ENSG00000088035.18	ENST00000603108.6	2055	15	22	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	90.1687759885056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	63365067	True	NA	-14	True	NA	NA	NA	63367602	63437182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415817_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
WTC11_00001320	chr1	+	629	4	FSM	ENSG00000088035.18	ENST00000462390.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	123.190908755476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTCGGTTCTTTCACTT	63419383	False	NA	NA	False	AATAAA	-13	NA	63419393	63429829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63419441_63428732_63428802_63428927_63429127_63429515
WTC11_00001321	chr1	+	985	2	FSM	ENSG00000088035.18	ENST00000494765.2	985	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCACAGGAAAGGAAATGG	NA	False	NA	-63	True	TATAAA	-27	NA	63428452	63437133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63429127_63436822
WTC11_00001326	chr1	+	8377	7	FSM	ENSG00000185483.13	ENST00000371080.5	2305	7	-808	-5264	-803	5264	multi-exon	FALSE	canonical	3	219	junction_6	188.328982250623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGATTGTTTTAT	NA	False	NA	18	True	AATAAA	-16	NA	63773213	64148649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63774509_64009304_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404
WTC11_00001332	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	439.731281580012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147463	False	NA	39	True	AATAAA	-27	NA	65147548	65232145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
WTC11_00001334	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	468.754775975669	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147722	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
WTC11_00001335	chr1	+	8358	5	NNC	ENSG00000162433.15	novel	6845	5	NA	NA	-862	0	intron_retention	FALSE	canonical	2	25	junction_1	543.159506959052	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65146673	False	NA	39	True	AATAAA	-27	NA	65146686	65232145	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_65148553_65190712_65190830_65218753_65218927_65224751_65224871_65226062
WTC11_00001336	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	246.432926980142	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65131610	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
WTC11_00001337	chr1	+	7029	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	-395	-5706	-395	0	multi-exon	FALSE	canonical	3	200	junction_1	476.860238958964	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65148583	False	NA	39	True	AATAAA	-27	NA	65148606	65232145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
WTC11_00001343	chr1	+	4622	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	-81	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	22.647050335284	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	65417583	True	NA	NA	False	AATAAA	-21	NA	65420586	65436007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
WTC11_00001347	chr1	+	2041	10	FSM	ENSG00000184588.18	ENST00000480109.2	2037	10	-4	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_1	14.2750754035759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCCCACCATGGGGG	66354303	True	NA	NA	False	NA	NA	NA	66354377	66372738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66354895_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
WTC11_00001350	chr1	+	5802	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	-95	-251	0	251	multi-exon	FALSE	canonical	3	22	junction_1	28.4887603706378	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGTTCTTCAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	66924894	66988870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
WTC11_00001355	chr1	+	6250	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	-1432	0	843	multi-exon	FALSE	canonical	3	43	junction_1	18.8628087928483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTCTAAAAAATTATTT	66930231	False	NA	NA	False	AATATA	-2	NA	66930242	66989462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
WTC11_00001356	chr1	+	1851	2	NNC	ENSG00000198160.15	novel	4818	13	NA	NA	26935	6864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAAACCTCTGTCTTC	66985834	False	NA	NA	False	NA	NA	NA	66985845	66995483	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_66987666_66995452
WTC11_00001359	chr1	+	958	2	FSM	ENSG00000116717.13	ENST00000460575.1	874	2	0	-84	0	84	multi-exon	FALSE	canonical	3	133	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGGGGTCAGGAGGG	67683497	True	NA	NA	False	NA	NA	NA	67685228	67686672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_67685539_67686024
WTC11_00001360	chr1	+	1834	2	NIC	ENSG00000116717.13	novel	1352	4	NA	NA	23	0	intron_retention	FALSE	canonical	3	160	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	67685389	False	NA	12	True	AATAAA	-22	NA	67685427	67688334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_67686588_67687660
WTC11_00001361	chr1	+	1295	2	FSM	ENSG00000285407.1	ENST00000646995.1	1299	2	0	4	0	-4	multi-exon	FALSE	canonical	2	4	junction_1	0	741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTGGTCTCTCTCTTT	68881502	False	NA	NA	False	NA	NA	NA	68881576	68943448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_68882004_68942580
WTC11_00001364	chr1	+	2726	13	NIC	ENSG00000116754.14	novel	3784	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	220	junction_1	247.820317412076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCATGTTCCTGTA	70199760	True	NA	6	True	AATAAA	-10	NA	70205723	70251997	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00001365	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	286.250570111029	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70199760	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00001366	chr1	+	7512	12	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-123	0	intron_retention	FALSE	canonical	3	258	junction_2	248.561082171461	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	NA	False	NA	20	True	AATAAA	-21	NA	70221246	70253052	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00001368	chr1	+	2918	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	-10	1051	0	0	multi-exon	FALSE	canonical	3	674	junction_11	129.088284224274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209063	True	NA	10	True	AATAAA	-14	NA	70221369	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00001371	chr1	+	2884	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	15714	-379	0	-1	3prime_fragment	FALSE	canonical	3	467	junction_11	179.91223755804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTTCATGTTCCTGT	70209089	True	NA	5	True	AATAAA	-9	NA	70221395	70251996	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
WTC11_00001374	chr1	+	3034	10	FSM	ENSG00000116754.14	ENST00000690370.1	3034	10	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_9	135.233223326807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70231537	False	NA	10	True	AATAAA	-14	NA	70231547	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00001376	chr1	+	4774	3	FSM	ENSG00000116754.14	ENST00000489188.1	784	3	-1884	-2106	-536	0	multi-exon	FALSE	canonical	3	674	junction_2	162.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70247837	False	NA	20	True	AATAAA	-21	NA	70247857	70253052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70250048_70250364_70250504_70250607
WTC11_00001377	chr1	+	3501	2	FSM	ENSG00000116754.14	ENST00000461935.1	3501	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70248373	False	NA	10	True	AATAAA	-14	NA	70248393	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70250504_70250610
WTC11_00001378	chr1	+	832	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	29	junction_1	34	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353914	True	NA	17	True	ATTAAA	-22	NA	70354776	70368023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355108_70366443_70366538_70367616
WTC11_00001383	chr1	+	1142	2	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	388	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTGAGGAATTATGTC	72980647	False	NA	NA	False	AATAAA	-38	NA	72980657	72989168	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72981709_72989077
WTC11_00001387	chr1	+	3524	6	NNC	ENSG00000162623.16	novel	3437	6	NA	NA	26	0	intron_retention	FALSE	canonical	3	53	junction_1	63.3592929253476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	74729607	True	NA	NA	False	AATAAA	-16	NA	74733177	74766677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_74733532_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
WTC11_00001389	chr1	+	2616	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	-357	-808	-82	42	multi-exon	TRUE	canonical	3	65	junction_1	137.499854545378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCTCATTCTCTAGTTC	NA	False	NA	5	True	ACTAAA	-19	NA	75724348	75763762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00001390	chr1	+	2533	12	FSM	ENSG00000117054.15	ENST00000370841.9	2261	12	-355	83	-77	0	multi-exon	FALSE	canonical	3	419	junction_2	43.0989635740469	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	NA	False	NA	-69	True	AAAAAG	-19	NA	75724353	75763596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00001392	chr1	+	2315	11	FSM	ENSG00000117054.15	ENST00000680805.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	152.253866945966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75750450_75750547_75761121_75761371_75762691
WTC11_00001393	chr1	+	3185	11	FSM	ENSG00000117054.15	ENST00000680582.1	3185	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	42.7304341190211	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAAACTGTGTTATAC	75724151	False	NA	-37	True	NA	NA	NA	75724430	75763720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00001398	chr1	+	721	7	FSM	ENSG00000137955.16	ENST00000473406.5	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	217.933794737964	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTATGAATACAGATG	75777565	True	NA	NA	False	NA	NA	NA	75786227	75791571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75786275_75786699_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460
WTC11_00001400	chr1	+	1165	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	283	0	0	multi-exon	FALSE	canonical	1	208	junction_8	132.643083121586	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75777593	True	NA	12	True	AATAAA	-26	NA	75786255	75794803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
WTC11_00001401	chr1	+	2340	8	NNC	ENSG00000137955.16	novel	2137	10	NA	NA	15	-16	intron_retention	FALSE	canonical	1	131	junction_5	163.394102259112	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACATATTGTAAAATAAA	75777608	True	NA	-4	True	AATAAA	-10	NA	75786270	75794787	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792196_75792307_75794083_75794234_75794509
WTC11_00001404	chr1	+	1695	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	15	junction_1	184.463707473855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	75786670	True	NA	31	True	AATAAA	-24	NA	75786699	75795086	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786966_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
WTC11_00001405	chr1	+	1643	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	19	junction_1	183.411380167644	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGATAGGTTTGAATAT	75786670	True	NA	28	True	AATAAA	-21	NA	75786699	75795083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786917_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
WTC11_00001407	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	1	163	junction_3	166.116722313254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75786671	True	NA	12	True	AATAAA	-26	NA	75786700	75794803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
WTC11_00001408	chr1	+	1196	7	ISM	ENSG00000137955.16	ENST00000471759.5	2137	10	371	3232	369	0	5prime_fragment	FALSE	canonical	3	163	junction_3	170.042560031959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTATGAATACAGATG	75787056	True	NA	NA	False	NA	NA	NA	75787071	75791571	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460
WTC11_00001412	chr1	+	1177	2	FSM	ENSG00000137955.16	ENST00000459697.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	1	208	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCTGTTATTCT	75793369	False	NA	43	True	AATAAA	-28	NA	75793381	75794834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75794234_75794509
WTC11_00001415	chr1	+	854	1	FSM	ENSG00000226415.1	ENST00000420977.1	750	1	-34	-70	-34	70	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTGCACATGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	76699754	76700608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76699800_76700600
WTC11_00001417	chr1	+	1009	3	FSM	ENSG00000117069.15	ENST00000480428.1	573	3	-42	-394	-42	394	multi-exon	FALSE	canonical	2	12	junction_2	19	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACATGGAGTTTCTTGT	76866486	True	NA	NA	False	ACTAAA	-5	NA	76867437	76871777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76867691_76868496_76868743_76871267
WTC11_00001420	chr1	+	616	2	Genic_Genomic	ENSG00000226084.5	novel	555	1	NA	NA	0	658	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTCTGCAATAATTCTG	77128616	False	NA	NA	False	NA	NA	NA	77129113	77130326	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_77129697_77130293
WTC11_00001422	chr1	+	3256	14	FSM	ENSG00000154027.19	ENST00000354567.7	3280	14	0	24	0	-20	multi-exon	FALSE	canonical	3	17	junction_11	6.6954015836889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATGGAAGAC	77281731	True	NA	NA	False	NA	NA	NA	77282018	77559942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
WTC11_00001424	chr1	+	5144	16	FSM	ENSG00000180488.16	ENST00000642959.1	5149	16	5	0	5	0	multi-exon	TRUE	canonical	1	1	junction_2	9.56010227746312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACTCTGTCTCAAAA	77778872	True	NA	NA	False	NA	NA	NA	77779640	77878378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77779737_77783237_77783268_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873003_77873121_77874845
WTC11_00001427	chr1	+	5507	16	FSM	ENSG00000180488.16	ENST00000646892.1	5563	16	56	0	44	0	multi-exon	FALSE	canonical	1	2	junction_1	9.51256479025972	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAAAACTCTGTCTCAA	77779730	False	NA	NA	False	NA	NA	NA	77779818	77878376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77780193_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
WTC11_00001430	chr1	+	3282	13	FSM	ENSG00000162614.19	ENST00000334785.12	3282	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.6809799800081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTATTTTAAGAC	77888589	True	NA	11	True	AATAAA	-20	NA	77888623	77943895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77888760_77916054_77916134_77917565_77917758_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
WTC11_00001433	chr1	+	4157	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	-694	-560	-690	560	multi-exon	FALSE	canonical	3	70	junction_1	67	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGAGTTTTAAAGTTT	78004229	False	NA	NA	False	ATTAAA	-9	NA	78004244	78018524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_78005322_78013050_78013620_78016013
WTC11_00001437	chr1	+	1083	3	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	33.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGTGCATGAAAATACAAAT	NA	False	NA	52	True	NA	NA	NA	81245290	81251197	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81247888_81247991_81250807
WTC11_00001438	chr1	+	975	3	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	67.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAATTTTAGAAATTAA	81241849	True	NA	64	True	NA	NA	NA	81245662	81251209	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81247636_81247991_81250807
WTC11_00001446	chr1	+	5857	21	NIC	ENSG00000117114.21	novel	7432	24	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_19	101.752690382122	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTTAACATGTGAACTT	81798702	True	NA	6	True	AATAAA	-15	NA	81800926	81992419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81986900_81987030_81990390
WTC11_00001447	chr1	+	5124	22	FSM	ENSG00000117114.21	ENST00000674208.1	5124	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_20	126.159618868743	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTGTGTCCAACTG	81800964	True	NA	NA	False	AAGAAA	-32	NA	81800997	81991794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81987288_81987342_81990390
WTC11_00001448	chr1	+	5800	20	NIC	ENSG00000117114.21	novel	5733	21	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	59.7672771993397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTGACAGTAAATAAATG	81800363	False	NA	-26	True	NA	NA	NA	81800822	81992387	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00001449	chr1	+	5923	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	422	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_19	101.908095851115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATTGTCATTAAAATAA	81801349	False	NA	NA	False	AATAAA	-22	NA	81801419	81991817	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81986900_81987030_81990390
WTC11_00001450	chr1	+	6364	20	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	422	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	60.0945238815819	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTGACAGTAAATAAATG	81801349	False	NA	-26	True	NA	NA	NA	81801419	81992387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00001451	chr1	+	8764	3	FSM	ENSG00000117114.21	ENST00000472424.2	8764	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	187.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTGACAGTAAATAAATG	81981517	False	NA	-26	True	NA	NA	NA	81981531	81992387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81984712_81985258_81985356_81986900
WTC11_00001453	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	30.4094454898474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	84076290	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
WTC11_00001460	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	10.9658560997307	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	86914616	False	NA	14	True	AATAAA	-33	NA	86914647	87098445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
WTC11_00001462	chr1	+	5065	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	-294	-3511	-294	-4	multi-exon	FALSE	canonical	3	19	junction_1	88.6746158717364	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTGATTCTGTTATAAG	87331028	False	NA	5	True	AATAAA	-15	NA	87331373	87348919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
WTC11_00001465	chr1	+	6680	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	-610	0	610	multi-exon	TRUE	canonical	2	86	junction_12	20.060565890694	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGCAGGAAGTTGGAAAA	88679529	True	NA	NA	False	NA	NA	NA	88684272	88836865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
WTC11_00001468	chr1	+	7860	6	NNC	ENSG00000197147.15	novel	3225	7	NA	NA	-644	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	33.6832302488939	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGCTGGAAGAAGTTG	NA	False	NA	-7	True	AATAAA	-36	NA	89524184	89597848	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89524588_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
WTC11_00001473	chr1	+	4283	3	NNC	ENSG00000171492.14	novel	3950	3	NA	NA	-148	-269	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	90.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTATATGGTACATTT	NA	False	NA	NA	False	AAGAAA	-44	NA	89820865	89936342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89821728_89843637_89843783_89933066
WTC11_00001474	chr1	+	3447	3	FSM	ENSG00000171492.14	ENST00000394593.7	3345	3	-102	0	-102	0	multi-exon	FALSE	canonical	3	9	junction_1	100	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	89821808	False	NA	20	True	ATTAAA	-20	NA	89821818	89936001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89822186_89843637_89843783_89933066
WTC11_00001478	chr1	+	1958	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	-2	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	64.0381830542442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	89989079	True	NA	8	True	AATAAA	-17	NA	89995109	90028226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
WTC11_00001480	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	129.005605618484	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91500793	True	NA	17	True	AATAAA	-22	NA	91501107	91525764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
WTC11_00001487	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5844	junction_6	569.066869568785	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	92746576	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
WTC11_00001490	chr1	+	1464	13	NIC	ENSG00000143033.18	novel	1937	14	NA	NA	-1	-84	intron_retention	FALSE	canonical	3	36	junction_8	236.65721812125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACTCAGAACTCAGAAA	93066792	True	NA	-7	True	NA	NA	NA	93079294	93136768	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00001491	chr1	+	4208	16	NNC	ENSG00000143033.18	novel	4075	15	NA	NA	-1	-15	intron_retention	TRUE	canonical	3	7	junction_2	231.998850571865	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTTTTAAAGAGCTAA	93066792	True	NA	18	True	ATTAAA	-21	NA	93079294	93139061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_93079532_93084727_93084884_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00001492	chr1	+	3908	14	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_10	177.613035930768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	93066780	True	NA	33	True	ATTAAA	-36	NA	93079282	93139076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00001493	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	230.007872260441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	93066807	True	NA	NA	False	NA	NA	NA	93079309	93137089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00001494	chr1	+	1975	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	-86	62	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	212.338988774662	3034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	93066722	True	NA	NA	False	NA	NA	NA	93079224	93137089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00001505	chr1	+	4787	29	FSM	ENSG00000122483.18	ENST00000370276.6	4779	29	-8	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	23.0625812315366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACATTGAGGAATGCA	93178381	True	NA	NA	False	TATAAA	-19	NA	93180715	93278730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214745_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93270346_93270815_93278462
WTC11_00001509	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	70.0027696245087	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	93434910	False	NA	27	True	AATAAA	-24	NA	93448281	93554661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
WTC11_00001518	chr1	+	739	3	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_1	49	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	95231855	True	NA	-2	True	ATTAAA	-10	NA	95234154	95247217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95246541_95246658_95246755
WTC11_00001521	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	54.1869192907497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	95231910	True	NA	6	True	ATTAAA	-18	NA	95234209	95247225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
WTC11_00001522	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	95231968	False	NA	1	True	ATTAAA	-13	NA	95234267	95247220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95234316_95246755
WTC11_00001528	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	48.4564099850479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
WTC11_00001539	chr1	+	1756	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	-20	0	0	0	multi-exon	TRUE	canonical	3	254	junction_2	26.7055705799371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98659919	True	NA	8	True	AATAAA	-15	NA	98661700	98760500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
WTC11_00001540	chr1	+	1562	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.369013755571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660080	False	NA	8	True	AATAAA	-15	NA	98661861	98760500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
WTC11_00001542	chr1	+	335	1	FSM	ENSG00000227034.1	ENST00000457507.1	257	1	2	-80	2	80	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTAAGGTGCTCAACTAG	NA	False	NA	NA	False	AATAAA	-34	NA	99008219	99008554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99008200_99008600
WTC11_00001546	chr1	+	7463	34	NIC	ENSG00000162688.17	novel	7091	34	NA	NA	-432	0	combination_of_known_splicesites	TRUE	canonical	2	9	junction_1	26.9748718222261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	99849819	True	NA	11	True	AATAAA	-18	NA	99849928	99924020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_99850416_99851034_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
WTC11_00001548	chr1	+	7166	34	FSM	ENSG00000162688.17	ENST00000370163.7	7166	34	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	27.6193461694567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	99850477	False	NA	11	True	AATAAA	-18	NA	99850488	99924020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99850619_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
WTC11_00001561	chr1	+	3829	13	NNC	ENSG00000156875.14	novel	2779	12	NA	NA	-1203	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	175.889702654817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	NA	False	NA	31	True	AATAAA	-34	NA	100036891	100083377	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_100037950_100038102_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
WTC11_00001562	chr1	+	4139	13	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	-1203	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	213.681031758398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	NA	False	NA	31	True	AATAAA	-34	NA	100036891	100083377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_100038317_100043072_100043230_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
WTC11_00001563	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_11	47.8204285680268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
WTC11_00001564	chr1	+	567	1	FSM	ENSG00000226952.1	ENST00000443135.1	252	1	-7	-308	-7	308	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTTCCAGACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	100099231	100099798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100099200_100099800
WTC11_00001565	chr1	+	476	5	FSM	ENSG00000122435.11	ENST00000370143.5	476	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	28.1424945589406	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCCTTTGTTCATTT	100131895	True	NA	NA	False	NA	NA	NA	100133149	100140540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140407
WTC11_00001578	chr1	+	8224	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	-24	4	-10	0	multi-exon	FALSE	canonical	3	79	junction_4	9.92975326984513	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	100893141	True	NA	8	True	AATAAA	-18	NA	100896065	100981753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
WTC11_00001581	chr1	+	714	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	20	3249	-3	-1	multi-exon	FALSE	canonical	0	0	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTAACTGTTTTTCT	101025235	True	NA	6	True	AATAAA	-19	NA	101025874	101087264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101026062_101083460_101083575_101086851
WTC11_00001596	chr1	+	3742	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	-14	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	140.800982477633	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	108686151	True	NA	11	True	ATTAAA	-17	NA	108692326	108701803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
WTC11_00001604	chr1	+	2442	14	ISM	ENSG00000121957.15	ENST00000642355.1	5609	16	16	9974	4	0	5prime_fragment	FALSE	canonical	3	107	junction_1	11.7155639159975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	108874919	True	NA	10	True	AGTAAA	-18	NA	108876996	108924361	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
WTC11_00001614	chr1	+	10976	34	FSM	ENSG00000143126.8	ENST00000271332.4	11015	34	39	0	39	0	multi-exon	FALSE	canonical	1	1	junction_33	24.5243455808876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGTCACTGTCCGCT	109249008	True	NA	7	True	AATAAA	-18	NA	109249577	109275751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109253390_109258431_109259080_109261041_109261265_109261512_109261629_109261807_109261897_109262286_109262445_109262805_109262970_109263141_109263268_109263610_109263778_109264077_109264366_109264453_109264629_109264867_109265010_109265190_109265312_109265734_109265919_109266104_109266207_109267547_109267643_109267850_109268061_109268580_109268765_109268879_109269009_109269109_109269291_109269423_109269592_109269693_109269821_109269932_109270134_109270425_109270601_109270926_109271040_109271216_109271297_109271385_109271513_109271599_109271723_109272277_109272406_109272639_109272729_109272832_109273028_109273165_109273337_109273435_109273671_109274021
WTC11_00001616	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	10.4804580052591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109482568	True	NA	21	True	AAAAAG	-19	NA	109483904	109492734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
WTC11_00001618	chr1	+	2624	11	FSM	ENSG00000162650.17	ENST00000684449.1	2624	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	25.2428207615552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATAGAAAAGGAAGGA	109482617	True	NA	64	True	TATAAA	-5	NA	109483953	109492777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109484081_109486056_109486305_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
WTC11_00001622	chr1	+	5029	4	FSM	ENSG00000174151.15	ENST00000310611.8	5009	4	-20	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATGTTCTTGTCCT	109493722	True	NA	9	True	ATTAAA	-18	NA	109494078	109500433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109494288_109494519_109494624_109495142_109495181_109495755
WTC11_00001623	chr1	+	4927	3	FSM	ENSG00000174151.15	ENST00000420578.7	4912	3	-15	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	109493722	True	NA	11	True	ATTAAA	-20	NA	109494078	109500435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109494288_109495142_109495181_109495755
WTC11_00001626	chr1	+	4637	13	FSM	ENSG00000116337.20	ENST00000680192.1	4615	13	-22	0	-16	0	multi-exon	FALSE	canonical	3	112	junction_1	24.6537128148187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAAGATTATTTAAGT	109617197	True	NA	-7	True	NA	NA	NA	109619814	109632029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109627519_109627773_109627904_109628082_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
WTC11_00001629	chr1	+	4103	19	FSM	ENSG00000116337.20	ENST00000528667.7	4081	19	-22	0	-16	0	multi-exon	FALSE	canonical	3	12	junction_1	54.3832989977304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109617197	True	NA	15	True	AATAAA	-15	NA	109619814	109632051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109620279_109620913_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
WTC11_00001630	chr1	+	3917	18	FSM	ENSG00000116337.20	ENST00000256578.8	3899	18	-22	4	-22	-2	multi-exon	FALSE	canonical	3	15	junction_1	43.533942530503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGGCAGGTGGGGTT	109620570	False	NA	11	True	AATAAA	-11	NA	109620631	109632047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
WTC11_00001631	chr1	+	4222	14	FSM	ENSG00000116337.20	ENST00000680170.1	4222	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	48.0755076714726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTATTTAAGTAA	109620856	False	NA	-5	True	NA	NA	NA	109620917	109632031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109627519_109627773_109627904_109628082_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
WTC11_00001637	chr1	+	1399	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	145	junction_2	11.5511285781335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	NA	False	NA	13	True	AATAAA	-13	NA	109656093	109661700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
WTC11_00001641	chr1	+	597	5	FSM	ENSG00000184371.14	ENST00000357302.8	597	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.89711431702997	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGCTTCACCAAGGAT	109910594	False	NA	NA	False	NA	NA	NA	109910604	109917425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109910633_109910812_109911063_109914258_109914382_109915633_109915697_109917292
WTC11_00001646	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	197.255376590221	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	110004119	False	NA	NA	False	NA	NA	NA	110004130	110022389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
WTC11_00001648	chr1	+	3171	20	NIC	ENSG00000143093.15	novel	3257	21	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	57.8730581421594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCGTTGGCTTGTCTAC	110026950	True	NA	7	True	ATTAAA	-15	NA	110034639	110054640	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110049111_110049239_110049459_110049561_110050342_110050410_110050955_110051061_110051682_110051888_110053664
WTC11_00001650	chr1	+	810	5	FSM	ENSG00000143093.15	ENST00000535003.5	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	12.6589889011722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGGGTAAGTTGGAGGT	110042861	False	NA	NA	False	NA	NA	NA	110042873	110046744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679
WTC11_00001652	chr1	+	18471	4	FSM	ENSG00000116396.15	ENST00000369787.7	18750	4	0	279	0	-279	multi-exon	FALSE	canonical	3	34	junction_3	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAAGTTTAAACTGCCAG	110211426	False	NA	NA	False	AGTAAA	-38	NA	110211472	110248845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232220
WTC11_00001654	chr1	+	2164	3	NIC	ENSG00000116396.15	novel	4139	4	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCACCTGCCTCTG	110211328	False	NA	17	True	AATAAA	-29	NA	110211344	110234037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_110212178_110225974_110226179_110232910
WTC11_00001657	chr1	+	3431	3	FSM	ENSG00000162775.17	ENST00000618772.4	3431	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTGGAAGTGAATT	110339282	True	NA	26	True	AATAAA	-24	NA	110339322	110346681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110342269_110345538_110345650_110346307
WTC11_00001662	chr1	+	2224	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	135	junction_4	20.3147114180832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	111139999	False	NA	14	True	AATAAA	-23	NA	111140201	111185104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
WTC11_00001664	chr1	+	5300	4	FSM	ENSG00000134255.15	ENST00000467362.1	5300	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	9.93310961716756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTGTTGTGATGTGTCT	NA	False	NA	10	True	AATAAA	-19	NA	111178213	111185100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111182319_111182798_111182958_111183461_111183588_111184190
WTC11_00001666	chr1	+	2510	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	-331	-1433	-311	-17	multi-exon	FALSE	canonical	3	13	junction_2	21.2720473861826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAATGAACACGAAGAC	111345956	False	NA	NA	False	AATAAA	-1	NA	111346288	111352996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
WTC11_00001669	chr1	+	2487	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	-7	-1440	-6	-1	multi-exon	FALSE	canonical	3	100	junction_2	1033.70583823446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGTTTGTGCTAAGCAA	111427420	True	NA	NA	False	ATTAAA	-17	NA	111449457	111462772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
WTC11_00001671	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	169	junction_1	12.328828005938	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	111617509	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
WTC11_00001676	chr1	+	5878	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	165	junction_1	18.1482781552411	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	112390361	True	NA	9	True	AATAAA	-16	NA	112396199	112461164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
WTC11_00001677	chr1	+	1014	6	FSM	ENSG00000143079.15	ENST00000441739.1	1014	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	74.766302570075	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGTGAAGGACCTAGAG	112396508	False	NA	54	True	AAGAAA	-16	NA	112396518	112456306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112396586_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
WTC11_00001680	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_9	62.5503254178309	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	112618660	True	NA	10	True	AATATA	-18	NA	112619831	112671616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
WTC11_00001683	chr1	+	3637	21	FSM	ENSG00000155363.19	ENST00000413052.6	3641	21	4	0	4	0	multi-exon	TRUE	canonical	3	53	junction_1	91.5517749691397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTCCTCTGCCTGGC	112674403	False	NA	31	True	AAGAAA	-40	NA	112674424	112700746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
WTC11_00001685	chr1	+	4711	18	FSM	ENSG00000155363.19	ENST00000468624.5	4689	18	-22	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	98.2317012375724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTATGCAAAAGCCTTGA	112671947	True	NA	11	True	AAGAAA	-20	NA	112674697	112700726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112699811_112699893_112700341_112700415
WTC11_00001686	chr1	+	4101	22	FSM	ENSG00000155363.19	ENST00000369644.5	4100	22	0	-1	0	1	multi-exon	FALSE	canonical	2	15	junction_3	131.302803868976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTGATAATGTCTC	112671947	True	NA	20	True	AAGAAA	-29	NA	112674697	112700735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674831_112675050_112686965_112687107_112688327_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
WTC11_00001687	chr1	+	4321	21	FSM	ENSG00000155363.19	ENST00000496577.5	4312	21	-8	-1	0	1	multi-exon	FALSE	canonical	2	15	junction_3	125.740794891714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTGATAATGTCTC	112671947	True	NA	20	True	AAGAAA	-29	NA	112674697	112700735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674847_112675050_112686965_112687107_112688327_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
WTC11_00001692	chr1	+	1370	5	FSM	ENSG00000155363.19	ENST00000490413.1	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	175.293147327555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	112698292	False	NA	24	True	AAGAAA	-33	NA	112698307	112700739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112698479_112698714_112698790_112699457_112699811_112699893_112700341_112700415
WTC11_00001695	chr1	+	749	2	FSM	ENSG00000224167.3	ENST00000658577.2	756	2	0	7	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAGTAATATGAGTGT	112849809	False	NA	7	True	AATAAA	-16	NA	112849820	112877871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112850428_112877729
WTC11_00001696	chr1	+	1567	3	FSM	ENSG00000226419.8	ENST00000664314.1	1508	3	0	-59	0	59	multi-exon	FALSE	canonical	3	22	junction_1	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAGGAAAGGATTCT	112955864	True	NA	77	True	NA	NA	NA	112956414	112964131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112957723_112960476_112960576_112963971
WTC11_00001700	chr1	+	539	5	FSM	ENSG00000198799.12	ENST00000466069.5	564	5	0	25	0	-25	multi-exon	FALSE	canonical	3	9	junction_4	47.5841360119105	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAACAGAATTAAAAAAA	113098705	False	NA	NA	False	TTTAAA	-25	NA	113098722	113107801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113098786_113100210_113100283_113100419_113100489_113103608_113103736_113107593
WTC11_00001702	chr1	+	1434	3	FSM	ENSG00000081026.19	ENST00000486456.1	897	3	-659	122	-43	-122	multi-exon	FALSE	canonical	3	24	junction_1	3	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGGTTGGAATTCAAA	113389902	True	NA	NA	False	NA	NA	NA	113390471	113580980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113391350_113549514_113549632_113580541
WTC11_00001703	chr1	+	7104	21	FSM	ENSG00000081026.19	ENST00000307546.14	6874	21	0	-230	0	230	multi-exon	FALSE	canonical	2	7	junction_15	5.40277706369604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTTTTCATCTTTCA	113389945	True	NA	NA	False	TATAAA	-36	NA	113390514	113686153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742_113643775_113646485_113646643_113649236_113649329_113651013_113651207_113653829_113654019_113659079_113659266_113671733_113671837_113672614_113672742_113673321_113673466_113681197_113681337_113682896
WTC11_00001705	chr1	+	6508	22	FSM	ENSG00000081026.19	ENST00000369615.5	6508	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_21	7.09348012737474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGGCCTGCATTTCTT	113390960	False	NA	8	True	TTTAAA	-8	NA	113390971	113685923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742_113643775_113646485_113646643_113649236_113649329_113651013_113651207_113653829_113654019_113659079_113659266_113671733_113671837_113672614_113672742_113673321_113673466_113681197_113681337_113682211_113682303_113682896
WTC11_00001711	chr1	+	8246	16	FSM	ENSG00000163349.22	ENST00000369558.5	8157	16	-89	0	-89	0	multi-exon	FALSE	canonical	3	61	junction_1	7.76716736583479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTTTTTGACTTCT	113928626	True	NA	21	True	AATAAA	-22	NA	113929620	113977804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113929940_113940381_113941460_113952765_113952890_113954650_113954771_113955562_113955650_113956626_113956812_113957123_113957287_113958065_113958292_113962316_113962439_113963386_113963522_113966129_113966273_113967765_113967949_113968441_113968649_113969955_113970198_113971823_113971955_113973023
WTC11_00001713	chr1	+	3966	15	FSM	ENSG00000163349.22	ENST00000369555.6	3966	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	20.9347869853612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTGTGTTATTGTG	113929841	False	NA	19	True	TATAAA	-32	NA	113929858	113973897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113929940_113940381_113941460_113952765_113952890_113954650_113954771_113955562_113955650_113956626_113956812_113957123_113957287_113958065_113958292_113962316_113962439_113966129_113966273_113967765_113967949_113968441_113968649_113969955_113970198_113971823_113971955_113973023
WTC11_00001718	chr1	+	8671	8	FSM	ENSG00000173218.15	ENST00000355485.7	8671	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	15.9616888268153	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTCTTTTCT	115639662	True	NA	12	True	AATAAA	-14	NA	115641969	115698221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_115642087_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
WTC11_00001737	chr1	+	7315	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	0	-2795	combination_of_known_junctions	TRUE	canonical	3	156	junction_1	60.0199177985473	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAATTTGAATGCTTGAC	117920345	True	NA	NA	False	AAGAAA	-16	NA	117929774	117963748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
WTC11_00001740	chr1	+	1796	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	-16	0	-14	0	multi-exon	TRUE	canonical	1	5	junction_9	713.499376313673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	119675455	True	NA	21	True	AATAAA	-12	NA	119711869	119744212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
WTC11_00001741	chr1	+	2811	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	-17	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	104.220727305081	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675469	True	NA	10	True	AATAAA	-1	NA	119711883	119744201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
WTC11_00001743	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	102.554480582778	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675519	True	NA	24	True	AATAAA	-15	NA	119711933	119744215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
WTC11_00001747	chr1	+	2573	8	NIC	ENSG00000273136.8	novel	3671	22	NA	NA	18998	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	109.908310580656	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	3	True	ATTAAA	-15	NA	120832903	120842110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120832984_120833602_120833776_120834494_120834547_120837168_120837342_120838050_120838103_120838744_120838918_120839631_120839741_120840349
WTC11_00001749	chr1	+	1483	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	-665	3	-628	0	multi-exon	FALSE	canonical	3	52	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	120912555	120953460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120913451_120952438_120952786_120953219
WTC11_00001750	chr1	+	698	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	19	junction_2	32.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913162	False	NA	NA	False	AATAAA	-28	NA	120913177	120953460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120913451_120952438_120952626_120953222
WTC11_00001751	chr1	+	1961	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	-700	0	-672	0	multi-exon	FALSE	canonical	3	84	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	120912511	120953460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120913451_120952438
WTC11_00001753	chr1	+	7260	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-60	112	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	72.6133001455291	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGCAATTCGCCTTATC	NA	False	NA	NA	False	AATGAA	-29	NA	121184914	121392986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
WTC11_00001755	chr1	+	4213	8	FSM	ENSG00000231752.7	ENST00000622787.4	4235	8	0	22	0	-22	multi-exon	FALSE	canonical	1	1	junction_1	37.9613122071642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAACAAGCTTTTA	121518890	True	NA	NA	False	AAAACA	-42	NA	121519111	121571870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_121519460_121556509_121556697_121556930_121557020_121562227_121562356_121564636_121564914_121565763_121565798_121568146_121568202_121568775
WTC11_00001756	chr1	+	2624	1	FSM	ENSG00000242352.2	ENST00000456826.2	2544	1	-131	51	-131	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTGGATGGTCACCTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	143766408	143769032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_143766400_143769000
WTC11_00001768	chr1	+	3801	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	-24	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	12.7359366217272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	145821815	True	NA	NA	False	AATAAA	-18	NA	145824175	145844402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
WTC11_00001769	chr1	+	1762	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	145821832	True	NA	11	True	AATAAA	-21	NA	145824192	145842493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
WTC11_00001778	chr1	+	2970	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.414166512345	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232562	True	NA	13	True	AATAAA	-15	NA	147242680	147295762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001779	chr1	+	2846	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	191.543249232466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232535	True	NA	-25	True	AATATA	-40	NA	147242653	147295724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001783	chr1	+	3077	23	FSM	ENSG00000131778.20	ENST00000652486.1	3058	23	-19	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_7	260.141744579234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232549	True	NA	4	True	AATAAA	-6	NA	147242667	147295753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147272446_147272631_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001785	chr1	+	2892	22	FSM	ENSG00000131778.20	ENST00000651510.1	2881	22	-11	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_6	197.91391655805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232549	True	NA	4	True	AATAAA	-6	NA	147242667	147295753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001786	chr1	+	2371	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	-16	3	-5	0	multi-exon	FALSE	canonical	3	67	junction_1	157.418977175562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232549	True	NA	13	True	AATAAA	-15	NA	147242667	147295762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001787	chr1	+	2839	21	FSM	ENSG00000131778.20	ENST00000652494.1	2818	21	-22	1	1	1	multi-exon	FALSE	canonical	0	0	junction_6	224.032118233078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTATTGCTTTCTTT	147232536	True	NA	12	True	AATAAA	-14	NA	147242654	147295761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001791	chr1	+	3206	22	FSM	ENSG00000131778.20	ENST00000651070.1	3189	22	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	217.703922179703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGCTAGTTGCATAATA	147232562	True	NA	-26	True	AATATA	-39	NA	147242680	147295723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272631_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001792	chr1	+	3066	23	FSM	ENSG00000131778.20	ENST00000651407.1	3050	23	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	239.990633426039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTCCTAATGGTTT	147232562	True	NA	-1	True	AATAAA	-1	NA	147242680	147295748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147272446_147272631_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001795	chr1	+	2591	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.813167930099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232565	True	NA	4	True	AATAAA	-6	NA	147242683	147295753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001796	chr1	+	2438	18	FSM	ENSG00000131778.20	ENST00000488864.5	2415	18	-23	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	213.611813625593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232562	True	NA	11	True	AATAAA	-13	NA	147242680	147295760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147259836_147259919_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00001814	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	28.8638371279704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-20	True	NA	NA	NA	148951936	148981746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
WTC11_00001816	chr1	+	1372	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	-366	0	-366	0	multi-exon	FALSE	canonical	3	105	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	149175357	False	NA	NA	False	AATAAA	-32	NA	149175381	149251067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149176251_149250564
WTC11_00001817	chr1	+	921	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	-3	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	149174950	True	NA	NA	False	AATAAA	-34	NA	149175889	149251069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149176251_149177157_149177213_149250564
WTC11_00001822	chr1	+	516	3	FSM	ENSG00000277147.7	ENST00000622695.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	30.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTTTGTGCCGCCTTCA	149607015	False	NA	NA	False	NA	NA	NA	149607031	149646809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149607239_149607456_149607555_149646598
WTC11_00001823	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606526	True	NA	3	True	AATAAA	-17	NA	149607306	149647610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149607555_149646598
WTC11_00001824	chr1	+	955	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	149606529	True	NA	17	True	AATAAA	-31	NA	149607309	149647624	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607555_149646598_149647065_149647380
WTC11_00001825	chr1	+	1521	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	-798	14	277	0	multi-exon	FALSE	canonical	3	52	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606594	False	NA	3	True	AATAAA	-17	NA	149606610	149647610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149607555_149646598_149646946_149647380
WTC11_00001848	chr1	+	1735	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	-58	437	-58	0	multi-exon	FALSE	canonical	3	191	junction_1	28.7791591260064	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	150149843	False	NA	7	True	GATAAA	-42	NA	150149857	150159628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
WTC11_00001849	chr1	+	1665	5	FSM	ENSG00000023902.14	ENST00000479194.5	1025	5	-53	-587	-53	0	multi-exon	FALSE	canonical	3	246	junction_1	10.5118980208143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGCTCTTGCTGATGC	150149373	False	NA	9	True	GATAAA	-44	NA	150150553	150159630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
WTC11_00001857	chr1	+	1931	8	NIC	ENSG00000118298.12	novel	1531	12	NA	NA	-2276	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_7	131.341430739015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAAATTAAAGTTTC	150260753	False	NA	-14	True	GATAAA	-36	NA	150260767	150265049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263661_150263680_150264592
WTC11_00001859	chr1	+	622	6	NNC	ENSG00000118292.9	novel	509	6	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	100.867041197807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271074	True	NA	8	True	AATAAA	-14	NA	150272677	150280914	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279639_150279742_150280834
WTC11_00001860	chr1	+	526	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	-108	0	-108	0	multi-exon	FALSE	canonical	3	113	junction_4	62.7176211283559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271068	True	NA	8	True	AATAAA	-14	NA	150272671	150280914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
WTC11_00001861	chr1	+	625	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	-118	2	-108	0	multi-exon	FALSE	canonical	3	40	junction_4	103.150375665821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271068	True	NA	8	True	AATAAA	-14	NA	150272671	150280914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
WTC11_00001864	chr1	+	1460	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	-27	0	-27	0	multi-exon	FALSE	canonical	3	8	junction_1	26.0338241524368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281889	True	NA	24	True	ATTAAA	-21	NA	150282515	150287093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
WTC11_00001872	chr1	+	3796	13	NIC	ENSG00000117360.13	novel	1097	4	NA	NA	773	0	combination_of_known_junctions	TRUE	canonical	3	65	junction_1	95.6124628673247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGATATTTTTCAC	150328536	False	NA	15	True	ATTAAA	-15	NA	150328547	150353195	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150330499_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
WTC11_00001876	chr1	+	898	2	FSM	ENSG00000117360.13	ENST00000470824.1	898	2	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGATATTTTTCAC	NA	False	NA	15	True	ATTAAA	-15	NA	150348683	150353195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150349219_150352832
WTC11_00001878	chr1	+	8170	10	FSM	ENSG00000163125.16	ENST00000401000.8	7605	10	-482	-83	21	83	multi-exon	FALSE	canonical	3	36	junction_3	13.6010166649772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAACCGCTGCTTTGT	150362576	True	NA	97	True	NA	NA	NA	150364167	150476649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
WTC11_00001889	chr1	+	4446	22	FSM	ENSG00000143379.13	ENST00000271640.9	4437	22	-9	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	17.9148907520419	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGGTTTTGTTTCT	150923555	True	NA	13	True	GATAAA	-4	NA	150926329	150964735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
WTC11_00001891	chr1	+	4426	22	FSM	ENSG00000143379.13	ENST00000692827.1	4418	22	61	-69	0	62	multi-exon	FALSE	canonical	3	39	junction_11	14.9554137051761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCTCCCCTGTGGGCTG	150923649	True	NA	84	True	NA	NA	NA	150926423	150964806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
WTC11_00001897	chr1	+	2843	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	-57	2	6	0	multi-exon	FALSE	canonical	3	50	junction_2	53.8392669588532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	151005162	True	NA	11	True	ATTAAA	-14	NA	151008425	151035711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
WTC11_00001898	chr1	+	3048	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	-23	0	6	0	multi-exon	FALSE	canonical	3	76	junction_2	48.5768904492073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005162	True	NA	13	True	ATTAAA	-16	NA	151008425	151035713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
WTC11_00001901	chr1	+	2901	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_6	63.2624603448909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	151005148	True	NA	11	True	ATTAAA	-14	NA	151008411	151035711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
WTC11_00001902	chr1	+	2601	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	4	-12	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	70.9072633797131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTCCTGTTTGGGGG	151005207	True	NA	-1	True	ATTAAA	-2	NA	151008470	151035699	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
WTC11_00001909	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	48.4733603814164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	151161290	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
WTC11_00001911	chr1	+	619	2	FSM	ENSG00000163156.12	ENST00000459799.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTTTCCTTAAGTCTG	151167852	False	NA	11	True	AATAAA	-20	NA	151167867	151169133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151168339_151168985
WTC11_00001913	chr1	+	3824	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	-24	0	-23	0	multi-exon	FALSE	canonical	3	36	junction_3	181.289038707682	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187435	True	NA	31	True	AATAAA	-20	NA	151198527	151249531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
WTC11_00001916	chr1	+	3615	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	-2	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	147.64278015719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187458	True	NA	31	True	AATAAA	-20	NA	151198550	151249531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
WTC11_00001919	chr1	+	1339	10	FSM	ENSG00000159352.16	ENST00000368881.8	1333	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	219	junction_7	794.657314138352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTTTTTGCTTCAAA	151238399	True	NA	21	True	AATAAA	-14	NA	151254702	151267459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266122_151266307_151266440_151266519_151266588_151267172
WTC11_00001923	chr1	+	1284	10	NNC	ENSG00000159352.16	novel	1319	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_9	831.232017349348	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGATGGTTTTGAGT	151238459	True	NA	38	True	AATAAA	-31	NA	151254762	151267476	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267175
WTC11_00001926	chr1	+	5075	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	0	-280	0	280	multi-exon	FALSE	canonical	3	34	junction_1	8.51377560192891	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCCACTTCCTGGGCC	151277612	True	NA	NA	False	NA	NA	NA	151282298	151292456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
WTC11_00001931	chr1	+	2081	2	FSM	ENSG00000159377.11	ENST00000476467.1	2067	2	-14	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGTAAAGTAAATAAATT	151391287	True	NA	-17	True	NA	NA	NA	151399572	151401906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151399728_151399980
WTC11_00001932	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_2	71.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151400876	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151401356_151401541_151401631_151401816
WTC11_00001934	chr1	+	2956	6	FSM	ENSG00000143375.15	ENST00000473377.5	2956	6	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	7.60526133673262	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	151534109	False	NA	16	True	ATTAAA	-28	NA	151534139	151538692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
WTC11_00001937	chr1	+	3108	13	FSM	ENSG00000143367.17	ENST00000368849.8	3107	13	-1	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	17.083739832562	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539113	True	NA	14	True	AATAAA	-23	NA	151540307	151583583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151540427_151562090_151562166_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
WTC11_00001940	chr1	+	1286	8	NIC	ENSG00000143376.14	novel	2777	10	NA	NA	-52	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	19.0926847835735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTTTACATTTTAT	151612272	True	NA	NA	False	AATAAA	-16	NA	151612284	151669360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151669140
WTC11_00001949	chr1	+	2562	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	-9	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	437.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	153620321	True	NA	-95	True	NA	NA	NA	153634065	153645470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153634344_153636571_153638449_153645063
WTC11_00001950	chr1	+	1937	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	-14	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	315.642598519275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	153620321	True	NA	13	True	NA	NA	NA	153634065	153646302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
WTC11_00001951	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	175.693369254505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	153620321	True	NA	17	True	NA	NA	NA	153634065	153646306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
WTC11_00001954	chr1	+	3396	3	FSM	ENSG00000143553.11	ENST00000474959.5	643	3	-38	-2715	-29	2113	multi-exon	FALSE	canonical	3	663	junction_2	53	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACTACTACTACTACTA	153654300	True	NA	NA	False	NA	NA	NA	153658673	153663965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153659185_153659447_153659567_153661199
WTC11_00001955	chr1	+	2484	2	FSM	ENSG00000143553.11	ENST00000478558.1	1205	2	-277	-1002	-253	714	multi-exon	FALSE	canonical	3	663	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGTGATTTAGACGA	NA	False	NA	NA	False	NA	NA	NA	153658449	153662566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153659567_153661199
WTC11_00001957	chr1	+	1186	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	-264	0	-253	0	multi-exon	FALSE	canonical	3	81	junction_1	291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	NA	False	NA	14	True	AATAAA	-12	NA	153658449	153661829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153658887_153659447_153659567_153661199
WTC11_00001961	chr1	+	3371	23	FSM	ENSG00000143624.14	ENST00000512605.4	3442	23	71	0	71	0	multi-exon	FALSE	canonical	3	150	junction_7	65.9055171444898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACGTTTTATAGTCAC	NA	False	NA	NA	False	NA	NA	NA	153750924	153773728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772712_153772924_153773082_153773192
WTC11_00001963	chr1	+	2889	9	FSM	ENSG00000143624.14	ENST00000368669.1	2889	9	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_7	24.1812815003672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGAGTGTCTGC	153766816	False	NA	3	True	AATAAA	-16	NA	153766830	153774079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772712_153772924_153773082_153773192
WTC11_00001965	chr1	+	3351	10	FSM	ENSG00000143554.14	ENST00000271857.6	3351	10	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	21.1980665319118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTCATTATCTCTCT	153774331	False	NA	26	True	AATAAA	-37	NA	153774353	153780157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776165_153776517_153776728_153777061_153777221_153777760_153777886_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779825
WTC11_00001966	chr1	+	4504	2	FSM	ENSG00000143554.14	ENST00000468403.1	4504	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGTCATTATCTCTC	153775296	False	NA	25	True	AATAAA	-36	NA	153775318	153780156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776728_153777061
WTC11_00001976	chr1	+	1759	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	-10	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	43.2155093330344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966364	True	NA	15	True	AATAAA	-15	NA	153967891	153974359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
WTC11_00001977	chr1	+	2074	10	NIC	ENSG00000143578.16	novel	1750	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	49.6777268321516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	153967341	False	NA	12	True	AATAAA	-12	NA	153967533	153974356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_153968185_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
WTC11_00001979	chr1	+	1592	10	NIC	ENSG00000143578.16	novel	1749	10	NA	NA	69	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	48.9083294680776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTGTATCCCAGAAGT	153966466	False	NA	10	True	AATAAA	-10	NA	153967993	153974354	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_153968165_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
WTC11_00001984	chr1	+	621	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	-47	-1	-46	0	multi-exon	FALSE	canonical	3	212	junction_1	13826.4394147188	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	153990702	False	NA	12	True	AATAAA	-12	NA	153990715	153992146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
WTC11_00001985	chr1	+	472	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	-5	0	-4	0	multi-exon	FALSE	canonical	3	39	junction_1	14528.4959884876	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	153902400	True	NA	16	True	AATAAA	-16	NA	153990757	153992150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
WTC11_00001986	chr1	+	356	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	23887	junction_3	4279.67226159512	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	153902400	True	NA	21	True	AATAAA	-21	NA	153990757	153992155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
WTC11_00001987	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_2	4568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	153902563	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153991224_153991565_153991677_153992064
WTC11_00001991	chr1	+	3456	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	670	junction_24	168.648282100813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201116	True	NA	26	True	AATAAA	-23	NA	154220864	154263505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00001992	chr1	+	3435	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	16	0	16	0	multi-exon	FALSE	canonical	3	12	junction_5	279.913525213095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201116	True	NA	26	True	AATAAA	-23	NA	154220864	154263505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00001993	chr1	+	3985	27	FSM	ENSG00000143569.19	ENST00000271877.11	3997	27	12	0	12	0	multi-exon	TRUE	canonical	3	103	junction_26	330.539562483621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	154201112	True	NA	25	True	AAAACA	-40	NA	154220860	154271509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
WTC11_00001994	chr1	+	4778	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	351.468609997313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	154201116	True	NA	25	True	AAAACA	-40	NA	154220864	154271509	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
WTC11_00001998	chr1	+	3443	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	380	junction_1	210.457203191053	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201194	True	NA	26	True	AATAAA	-23	NA	154220942	154263505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00001999	chr1	+	3965	27	FSM	ENSG00000143569.19	ENST00000428931.6	3877	27	-88	0	18	0	multi-exon	FALSE	canonical	3	305	junction_26	250.262043140158	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201118	True	NA	7	True	TATAAA	-14	NA	154220866	154270847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
WTC11_00002000	chr1	+	3886	27	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_25	284.78024331447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201194	True	NA	7	True	TATAAA	-14	NA	154220942	154270847	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154270199
WTC11_00002001	chr1	+	3395	27	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	2	142	combination_of_known_junctions	FALSE	canonical	3	103	junction_26	298.919632586356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCTGACCTTAATGTG	154201220	True	NA	6	True	AATAAA	-21	NA	154220968	154270995	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
WTC11_00002004	chr1	+	3862	26	FSM	ENSG00000143569.19	ENST00000361546.6	3864	26	2	0	2	0	multi-exon	FALSE	canonical	3	305	junction_25	243.137636741003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTATTCTTGCTC	154224966	True	NA	13	True	TATAAA	-20	NA	154225083	154270853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
WTC11_00002010	chr1	+	1030	4	FSM	ENSG00000143569.19	ENST00000475373.1	838	4	-9	-183	-9	0	multi-exon	FALSE	canonical	3	670	junction_3	336.481136998132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154259712	False	NA	26	True	AATAAA	-23	NA	154259726	154263505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00002014	chr1	+	1265	7	NNC	ENSG00000143575.15	novel	1151	7	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_1	236.191130231429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154272352	False	NA	27	True	AATAAA	-16	NA	154272365	154275873	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_154272777_154273440_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
WTC11_00002016	chr1	+	1147	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	-40	2	0	0	multi-exon	FALSE	canonical	3	583	junction_2	40.0277681394082	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266770	True	NA	27	True	AATAAA	-16	NA	154272588	154275873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
WTC11_00002018	chr1	+	1291	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	-9	2	0	0	multi-exon	FALSE	canonical	3	629	junction_2	28.7012194862866	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266801	True	NA	27	True	AATAAA	-16	NA	154272619	154275873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
WTC11_00002026	chr1	+	1178	1	FSM	ENSG00000271380.1	ENST00000605085.1	799	1	-379	0	-379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGTATAAAAGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	154961445	154962623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154961400_154962600
WTC11_00002027	chr1	+	5905	2	FSM	ENSG00000173207.13_ENSG00000264349.1	ENST00000471245.1	1166	2	-2672	-2067	-26	1890	multi-exon	FALSE	canonical	3	4836	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGGAATTCTTGTTTT	154974600	False	NA	15	True	AATAAA	-26	NA	154974626	154981141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154978115_154978724
WTC11_00002028	chr1	+	993	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	-81	0	-81	0	multi-exon	FALSE	canonical	3	108	junction_1	2364	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	154974545	False	NA	40	True	ATTAAA	-20	NA	154974571	154979248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154974913_154977986_154978115_154978724
WTC11_00002029	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	4039	junction_1	398.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	154939952	True	NA	43	True	ATTAAA	-23	NA	154974680	154979251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154974805_154977986_154978115_154978724
WTC11_00002035	chr1	+	1211	4	FSM	ENSG00000160688.19	ENST00000295530.6	1211	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	28.0832096931007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154988041	False	NA	22	True	AATAAA	-18	NA	154988056	154993111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154988850_154990158_154990258_154992564_154992674_154992901
WTC11_00002036	chr1	+	1111	5	FSM	ENSG00000160688.19	ENST00000368428.1	1111	5	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_1	73.9205654740276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154988519	False	NA	22	True	AATAAA	-18	NA	154988540	154993111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154988850_154989559_154989708_154990158_154990529_154992712_154992787_154992901
WTC11_00002041	chr1	+	3771	3	FSM	ENSG00000160685.14	ENST00000535420.6	3606	3	-166	1	6	0	multi-exon	FALSE	canonical	3	24	junction_1	7	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	155002474	True	NA	5	True	AAGAAA	-20	NA	155002635	155018522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155002944_155014654_155015815_155016219
WTC11_00002044	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_19	22.5947237635275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	155049048	True	NA	10	True	AATAAA	-4	NA	155051285	155062758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
WTC11_00002048	chr1	+	2819	21	FSM	ENSG00000143537.14	ENST00000271836.10	2799	21	-20	0	0	0	multi-exon	FALSE	canonical	3	28	junction_19	23.1708329587005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	155049048	True	NA	27	True	AATAAA	-21	NA	155051285	155062775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
WTC11_00002049	chr1	+	2936	23	FSM	ENSG00000143537.14	ENST00000356955.7	2936	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_19	25.086503236364	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	155049078	True	NA	27	True	AATAAA	-21	NA	155051315	155062775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
WTC11_00002055	chr1	+	1073	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	-21	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	39.0754256392543	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061029	True	NA	20	True	AATAAA	-14	NA	155063739	155069538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
WTC11_00002066	chr1	+	1055	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	-52	0	-5	0	multi-exon	FALSE	canonical	3	64	junction_2	158.34421015272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132113	True	NA	5	True	AATAAA	-17	NA	155135806	155138851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
WTC11_00002076	chr1	+	3094	10	FSM	ENSG00000163462.19	ENST00000611379.1	3082	10	-12	0	-12	0	multi-exon	TRUE	canonical	1	1	junction_1	9.97899027525231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	155174431	True	NA	28	True	AATAAA	-35	NA	155174741	155184971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155174838_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
WTC11_00002081	chr1	+	2592	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	-13	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	25.1241362482817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155202237	True	NA	NA	False	AATAAA	-15	NA	155209237	155213823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
WTC11_00002088	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	519.73450012221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	155308761	False	NA	-29	True	GGGGCT	-32	NA	155308793	155320609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00002090	chr1	+	1429	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	-12	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	960.212273406251	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287300	True	NA	27	True	AATAAA	-16	NA	155308853	155320665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00002091	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	488.417196692225	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	155287335	True	NA	9	True	NA	NA	NA	155308888	155320647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00002092	chr1	+	1480	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	-2	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	969.77719090521	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287360	True	NA	27	True	AATAAA	-16	NA	155308913	155320665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00002093	chr1	+	992	5	FSM	ENSG00000160752.15	ENST00000489003.5	976	5	-16	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	928.699897706466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACCCTGGACCTCCTCA	155287414	True	NA	NA	False	NA	NA	NA	155308967	155318687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168
WTC11_00002095	chr1	+	1200	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	-2	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	716.354626297118	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	155287414	True	NA	-1	True	NA	NA	NA	155308967	155320637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00002099	chr1	+	2560	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	-592	0	-16	0	multi-exon	FALSE	canonical	3	86	junction_1	68.3893951939919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155323838	False	NA	27	True	AATAAA	-13	NA	155323920	155331112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
WTC11_00002100	chr1	+	2789	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	-671	385	254	0	multi-exon	FALSE	canonical	3	80	junction_1	70.0311314702254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCACCTGTAAGGTGAA	155323161	False	NA	19	True	AATAAA	-19	NA	155323265	155330729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
WTC11_00002101	chr1	+	2365	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	-618	2	-16	0	multi-exon	FALSE	canonical	3	39	junction_5	106.406805060886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155323838	False	NA	27	True	AATAAA	-13	NA	155323920	155331112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
WTC11_00002106	chr1	+	1680	9	NIC	ENSG00000160753.16	novel	1968	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	94.4904095662623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322329	True	NA	29	True	AATAAA	-15	NA	155324484	155331114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
WTC11_00002107	chr1	+	1596	9	NIC	ENSG00000160753.16	novel	2503	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	95.5235573039447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322370	True	NA	29	True	AATAAA	-15	NA	155324525	155331114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
WTC11_00002108	chr1	+	2045	8	NIC	ENSG00000160753.16	novel	1749	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	113.746226669867	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322375	True	NA	29	True	AATAAA	-15	NA	155324530	155331114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326609_155327133_155328149_155328276_155330402
WTC11_00002113	chr1	+	1049	8	FSM	ENSG00000125459.17	ENST00000460199.5	1033	8	-16	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_6	94.0299561472897	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACAGCTCTCTTGTCTGC	155610144	True	NA	NA	False	ATTAAA	-30	NA	155610199	155612478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611853_155611982_155612101_155612181
WTC11_00002114	chr1	+	2456	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	-18	0	-5	0	multi-exon	FALSE	canonical	3	26	junction_11	74.0351747522197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	155610144	True	NA	11	True	NA	NA	NA	155610199	155614933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
WTC11_00002127	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	125.78958952685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678074	True	NA	-12	True	AATAAA	-11	NA	155689082	155738526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00002128	chr1	+	1913	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	13	-32	2	-7	multi-exon	FALSE	canonical	3	47	junction_2	144.88239745017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAATGTATACTGTACT	155678095	True	NA	NA	False	AATAAA	-25	NA	155689103	155739003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00002129	chr1	+	2064	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	-8	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	41.1082581592664	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	155678074	True	NA	NA	False	AATAAA	-32	NA	155689082	155739010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00002130	chr1	+	1469	12	NIC	ENSG00000132676.16	novel	2056	13	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	156.806455424545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTAAAGTGTTGTGTT	155678088	True	NA	8	True	AATAAA	-4	NA	155689096	155738519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155736945_155737064_155738156
WTC11_00002131	chr1	+	1475	12	NIC	ENSG00000132676.16	novel	2056	13	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	15	junction_7	149.472460770958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAAGTGTTGTGTTAGA	155678094	True	NA	11	True	AATAAA	-7	NA	155689102	155738522	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00002132	chr1	+	1900	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	15	-445	4	0	multi-exon	FALSE	canonical	3	73	junction_3	137.296686650805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	155678097	True	NA	NA	False	NA	NA	NA	155689105	155738971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00002137	chr1	+	679	2	FSM	ENSG00000132676.16	ENST00000476444.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTGTTAGATTAATAA	155736731	False	NA	-9	True	AATAAA	-14	NA	155736757	155738529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155737064_155738156
WTC11_00002140	chr1	+	5260	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	-85	7	-85	-7	multi-exon	FALSE	canonical	0	0	junction_3	17.5182444579612	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCACAGTGATGTCAGC	155858322	True	NA	4	True	AATAAA	-17	NA	155859481	155885192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
WTC11_00002142	chr1	+	620	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	-99	0	-89	0	multi-exon	FALSE	canonical	3	95	junction_2	744.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156054682	False	NA	37	True	AATAAA	-16	NA	156054692	156058506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156054958_156055262_156055426_156058314
WTC11_00002153	chr1	+	1586	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	6	-78	6	78	multi-exon	FALSE	canonical	2	7	junction_1	55.4576915815611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAGGGAGTGGGAACT	156125923	True	NA	90	True	NA	NA	NA	156126180	156137944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
WTC11_00002154	chr1	+	3172	15	FSM	ENSG00000196189.14	ENST00000355014.6	3137	15	-35	0	-35	0	multi-exon	FALSE	canonical	3	9	junction_1	11.2451803735046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGATGGGTGCTGTGTT	156149968	False	NA	12	True	ATTAAA	-14	NA	156149983	156177744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156150094_156154549_156154718_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
WTC11_00002155	chr1	+	3123	15	NIC	ENSG00000196189.14	novel	3249	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	11.9131637018785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGATGGGTGCTGTGTT	156149839	True	NA	12	True	ATTAAA	-14	NA	156150202	156177744	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156150264_156154549_156154718_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
WTC11_00002161	chr1	+	6940	3	FSM	ENSG00000160785.14	ENST00000469537.1	6952	3	12	0	12	0	multi-exon	FALSE	canonical	3	166	junction_1	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	156192127	False	NA	13	True	ATTAAA	-20	NA	156196216	156212795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156200473_156207885_156208014_156210239
WTC11_00002162	chr1	+	908	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	-24	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	533.96927580152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	156200077	True	NA	NA	False	NA	NA	NA	156212981	156239851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
WTC11_00002165	chr1	+	1275	3	FSM	ENSG00000160783.19	ENST00000606952.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	526.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACACCTTTTACCTAA	156200102	True	NA	NA	False	NA	NA	NA	156213006	156237291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156233627_156233729_156236287
WTC11_00002167	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	TRUE	canonical	3	1070	junction_3	45.18849411078	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	156200102	True	NA	42	True	AATAAA	-21	NA	156213006	156240042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
WTC11_00002172	chr1	+	540	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	9	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	156338181	True	NA	NA	False	AGTAAA	-12	NA	156338474	156346990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
WTC11_00002174	chr1	+	618	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	-23	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	156338209	True	NA	NA	False	AGTAAA	-17	NA	156338502	156346995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
WTC11_00002177	chr1	+	926	6	NNC	ENSG00000163382.13	novel	1111	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_1	728.102465316524	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCAGAACTGTGGATT	156575953	True	NA	13	True	AATAAA	-15	NA	156591786	156594129	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_156591987_156592104_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
WTC11_00002178	chr1	+	2685	8	FSM	ENSG00000132692.19	ENST00000361588.5	2563	8	-126	4	0	-4	multi-exon	FALSE	canonical	2	9	junction_3	3.45820526768863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTCTGGTACCCTCTG	156641955	True	NA	9	True	AATAAA	-23	NA	156642116	156653468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247
WTC11_00002179	chr1	+	3294	14	FSM	ENSG00000132692.19	ENST00000329117.10	3297	14	3	0	3	0	multi-exon	TRUE	canonical	2	6	junction_8	6.59657433062103	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	156641958	True	NA	7	True	AATAAA	-22	NA	156642119	156659528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247_156652893_156656281_156656390_156656937_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
WTC11_00002181	chr1	+	1191	5	FSM	ENSG00000143303.12	ENST00000519086.5	1191	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.6264999280069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACGAGCTCAAGATTGA	156728794	False	NA	NA	False	NA	NA	NA	156728948	156734470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156733376_156733521_156734008
WTC11_00002192	chr1	+	6870	11	FSM	ENSG00000183853.18	ENST00000368172.1	6870	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	15.685981002156	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTGTGTTATTTAA	158086666	True	NA	NA	False	TATAAA	-21	NA	158086679	158100262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158086747_158087754_158087861_158088005_158088155_158088326_158088455_158089453_158089629_158089717_158089819_158091357_158091557_158093338_158093447_158093622_158093763_158094312_158094391_158094643
WTC11_00002195	chr1	+	1209	3	FSM	ENSG00000158473.8	ENST00000674047.1	1209	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	3	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCCCCCCATTCCCTT	158181003	False	NA	NA	False	AAAAAG	-44	NA	158181035	158182846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158181163_158181454_158181722_158182031
WTC11_00002207	chr1	+	2694	6	FSM	ENSG00000162734.13	ENST00000368076.1	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	223.506062557596	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	160193473	True	NA	33	True	AATAAA	-25	NA	160205420	160215376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160205523_160207132_160207238_160208463_160208666_160211542_160211717_160213109_160213266_160213421
WTC11_00002208	chr1	+	304	1	FSM	ENSG00000235082.2	ENST00000439961.2	304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTTTTATTTTTTTT	160317386	False	NA	NA	False	NA	NA	NA	160317402	160317706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160317400_160317700
WTC11_00002210	chr1	+	779	7	FSM	ENSG00000162736.17	ENST00000421914.5	776	7	-3	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	131.337986381194	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTGAGCATCTCCCCT	160338889	True	NA	NA	False	NA	NA	NA	160343382	160353237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160352886_160352992_160353159
WTC11_00002212	chr1	+	1246	11	FSM	ENSG00000162736.17	ENST00000459963.5	1246	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	151.637099682103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATCTGGTGTGGGAA	160349634	False	NA	NA	False	NA	NA	NA	160349655	160356347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160349671_160350104_160350251_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160353322_160353502_160354117_160354291_160355654_160355758_160355862_160355959_160356259
WTC11_00002216	chr1	+	1157	2	FSM	ENSG00000162736.17	ENST00000469159.1	856	2	0	-301	0	0	multi-exon	FALSE	canonical	3	397	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160356885	False	NA	13	True	ATTAAA	-16	NA	160356897	160358949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160357254_160358148
WTC11_00002219	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.4537111889553	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	161097818	True	NA	-32	True	TATAAA	-16	NA	161098360	161100298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
WTC11_00002235	chr1	+	2304	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	-19	-90	10	90	multi-exon	TRUE	non_canonical	1	45	junction_10	55.8440288263262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCGCTCTCAGAGCC	161159446	False	NA	NA	False	NA	NA	NA	161159459	161165813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
WTC11_00002237	chr1	+	2405	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	-90	0	90	multi-exon	FALSE	non_canonical	1	45	junction_11	65.4823703633456	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCGCTCTCAGAGCC	161156574	True	NA	NA	False	NA	NA	NA	161159499	161165813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
WTC11_00002239	chr1	+	2514	9	FSM	ENSG00000143258.16	ENST00000487163.5	2514	9	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_6	60.2971806969447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161161334	False	NA	NA	False	AATAAA	-16	NA	161161362	161165723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161164613_161164834_161164943_161165028_161165144_161165356
WTC11_00002244	chr1	+	1756	13	FSM	ENSG00000143224.18	ENST00000367999.9	1733	13	-24	1	-8	1	multi-exon	TRUE	canonical	3	183	junction_3	72.5584055931649	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTGGCTGTTCTATC	161164182	True	NA	20	True	AATAAA	-17	NA	161166401	161171219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00002248	chr1	+	1328	10	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	108.856684580129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164215	True	NA	19	True	AATAAA	-16	NA	161166434	161171218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00002251	chr1	+	831	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	-18	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	141.802679805425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	161164232	True	NA	21	True	AATAAA	-18	NA	161166451	161171220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
WTC11_00002254	chr1	+	1176	10	FSM	ENSG00000143224.18	ENST00000652103.1	1176	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	110.272837840658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTGGTCTGGCTGTT	161166851	False	NA	15	True	AATAAA	-12	NA	161166894	161171214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166935_161167099_161167235_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00002269	chr1	+	1957	13	FSM	ENSG00000158864.13	ENST00000678850.1	1940	13	-17	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_1	74.5927368373683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161202269	161214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002271	chr1	+	1569	13	FSM	ENSG00000158864.13	ENST00000677045.1	1545	13	-24	0	3	0	multi-exon	FALSE	canonical	3	153	junction_1	349.252535185263	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161202289	161214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002272	chr1	+	2116	12	FSM	ENSG00000158864.13	ENST00000676871.1	2119	12	3	0	3	0	multi-exon	FALSE	canonical	3	1219	junction_1	75.8197078547099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161202289	161214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002274	chr1	+	1782	15	FSM	ENSG00000158864.13	ENST00000677453.1	1889	15	0	107	0	9	multi-exon	FALSE	canonical	3	8	junction_10	485.508990227613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGTGTCTCAGTATCTT	NA	False	NA	42	True	AATAAA	-39	NA	161202269	161214404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161212591_161212655_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002283	chr1	+	1640	14	FSM	ENSG00000158864.13	ENST00000676972.1	1613	14	-18	-9	0	9	multi-exon	FALSE	canonical	3	1219	junction_1	74.4667830320871	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGTGTCTCAGTATCTT	161187252	True	NA	42	True	AATAAA	-39	NA	161202348	161214404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002284	chr1	+	2446	13	FSM	ENSG00000158864.13	ENST00000676770.1	2446	13	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_11	56.9656329143575	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187379	False	NA	19	True	AATAAA	-16	NA	161202475	161214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002285	chr1	+	2112	11	FSM	ENSG00000158864.13	ENST00000679071.1	2112	11	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_9	58.0362817554674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161188153	False	NA	19	True	AATAAA	-16	NA	161203249	161214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161203544_161206406_161206598_161209192_161209314_161209482_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
WTC11_00002299	chr1	+	2882	7	FSM	ENSG00000289106.1_ENSG00000143252.16	ENST00000504963.5	571	7	-14	-2297	-4	-2	multi-exon	FALSE	canonical	1	1	junction_3	391.603115411509	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTATTTTCCAAATTTG	161306947	True	NA	NA	False	AGTAAA	-16	NA	161314376	161364749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
WTC11_00002300	chr1	+	3949	1	Genic_Genomic	ENSG00000288670.1	novel	NA	NA	NA	NA	-1763	-1757	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGAAACCCCATCTCTA	161366155	False	NA	NA	False	NA	NA	NA	161366258	161370207	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_161366300_161370200
WTC11_00002301	chr1	+	1838	5	FSM	ENSG00000081721.12	ENST00000464004.2	740	5	-243	-855	-221	554	multi-exon	FALSE	canonical	3	207	junction_1	80.7260026261675	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGGGTAGGGAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	161749536	161753960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074
WTC11_00002302	chr1	+	1623	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-221	31	combination_of_known_junctions	FALSE	canonical	3	207	junction_1	77.2631865767909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGGGTATTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	161749536	161757269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
WTC11_00002303	chr1	+	1384	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	-54	0	-26	0	multi-exon	FALSE	canonical	3	236	junction_1	66.3246560488632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	161745306	True	NA	121	True	NA	NA	NA	161749731	161757238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
WTC11_00002305	chr1	+	7499	16	FSM	ENSG00000118217.7	ENST00000367942.4	7470	16	-29	0	-7	0	multi-exon	FALSE	canonical	3	91	junction_2	10.5126378971006	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTATTCTGTATGTA	161764355	True	NA	26	True	AATAAA	-16	NA	161766290	161964070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
WTC11_00002316	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	57.0550957462809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	162558228	True	NA	20	True	AATAAA	-21	NA	162561532	162599837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
WTC11_00002325	chr1	+	1846	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	126	junction_1	43.156519867809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	163317322	True	NA	38	True	AATATA	-24	NA	163321930	163355764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
WTC11_00002329	chr1	+	955	1	FSM	ENSG00000213070.3	ENST00000444896.1	598	1	-98	-259	-98	259	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTTCTCCTCACTCT	NA	False	NA	NA	False	AATGAA	-9	NA	164356668	164357623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164356700_164357600
WTC11_00002336	chr1	+	1130	6	FSM	ENSG00000143198.13	ENST00000627653.1	1130	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	647.384707882415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTGTTTCTGTTGCTT	165611113	False	NA	NA	False	AATAAA	-20	NA	165632239	165656133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
WTC11_00002341	chr1	+	4671	3	FSM	ENSG00000143179.16	ENST00000479872.5	4669	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	502	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	165902546	False	NA	19	True	AATAAA	-16	NA	165902592	165911618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165903280_165905920_165905970_165907683
WTC11_00002345	chr1	+	7108	5	NNC	ENSG00000143157.12	novel	6254	5	NA	NA	-29	758	intron_retention	FALSE	canonical	3	5	junction_1	79.3237038973849	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGTTTTGCACAGTGA	166840036	False	NA	NA	False	AATACA	-14	NA	166840059	166855231	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_166840514_166840954_166841089_166846611_166846739_166847493_166847593_166848937
WTC11_00002353	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	70.4812031679369	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	167710863	True	NA	16	True	AATAAA	-17	NA	167721981	167791919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
WTC11_00002358	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	19.255270242164	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	167933315	True	NA	6	True	ATTAAA	-20	NA	167936707	168075834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
WTC11_00002366	chr1	+	2197	3	FSM	ENSG00000117475.14	ENST00000367807.7	1295	3	8	-910	6	910	multi-exon	FALSE	canonical	3	103	junction_2	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCTTGTTGTATTGA	169367591	True	NA	NA	False	ATTAAA	-14	NA	169367977	169378293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169368343_169369472_169369551_169376539
WTC11_00002367	chr1	+	2870	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	-247	-99	-22	99	multi-exon	FALSE	canonical	3	78	junction_6	13.3873904186821	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTACTATAAAAGTCTC	NA	False	NA	123	True	NA	NA	NA	169367947	169388404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
WTC11_00002368	chr1	+	926	5	FSM	ENSG00000117475.14	ENST00000426663.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	43.8263619297792	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTGAACGGGAACAGTT	169367102	True	NA	NA	False	GGGGCT	-13	NA	169368236	169380562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169368363_169369472_169369551_169376539_169376980_169378329_169378530_169380480
WTC11_00002371	chr1	+	3071	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	2	179	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.1651054133854	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGCAATTTAAAATCAT	169792111	True	NA	NA	False	AATAAA	-18	NA	169795044	169853264	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
WTC11_00002372	chr1	+	3727	23	FSM	ENSG00000000460.17	ENST00000459772.5	3727	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.0777390935024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	169792145	True	NA	NA	False	AATAAA	-27	NA	169795078	169854080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169795214_169798918_169798959_169802620_169802726_169803168_169803310_169804111_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
WTC11_00002373	chr1	+	4355	24	FSM	ENSG00000000460.17	ENST00000286031.10	4355	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	38.5556823661846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	169795391	False	NA	NA	False	AATAAA	-27	NA	169795408	169854080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169795984_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
WTC11_00002376	chr1	+	2563	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	-23	0	-2	0	multi-exon	FALSE	canonical	3	55	junction_1	19.4036079119323	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	170530701	True	NA	NA	False	AATAAA	-14	NA	170532142	170553834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
WTC11_00002381	chr1	+	10620	35	FSM	ENSG00000117523.18	ENST00000647382.2	10624	35	0	4	0	-4	multi-exon	FALSE	canonical	2	3	junction_33	59.5040924997723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTTGGAGCTTATAA	171470348	True	NA	NA	False	AATAAA	-15	NA	171485529	171593507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171589368_171589606_171591586
WTC11_00002383	chr1	+	10230	34	NIC	ENSG00000117523.18	novel	10366	34	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	56.6531340185435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTTGGAGCTTATAA	171511942	True	NA	NA	False	AATAAA	-15	NA	171512031	171593507	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
WTC11_00002389	chr1	+	5791	24	FSM	ENSG00000094975.14	ENST00000263688.4	5625	24	-168	2	-136	0	multi-exon	FALSE	canonical	3	120	junction_9	24.4196146640414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	NA	False	NA	28	True	AATAAA	-21	NA	172532981	172611831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
WTC11_00002391	chr1	+	5633	23	NIC	ENSG00000094975.14	novel	5625	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_11	35.2457722685986	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	172529894	True	NA	30	True	AATAAA	-23	NA	172533120	172611833	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
WTC11_00002397	chr1	+	4254	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	-840	0	840	multi-exon	TRUE	canonical	3	31	junction_1	8.19191296441368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGCATAGTTTTTTCC	173713404	True	NA	NA	False	ATTAAA	-32	NA	173714980	173787532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
WTC11_00002401	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	83.4472820940796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	173819823	True	NA	-8	True	GATAAA	-5	NA	173824652	173858400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
WTC11_00002410	chr1	+	6441	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_8	32.2335229225724	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTATGTCTTTTT	174870620	True	NA	12	True	AATAAA	-12	NA	174874395	174995301	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
WTC11_00002411	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	60.1793615416079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174870682	True	NA	14	True	AATAAA	-20	NA	174874457	174958182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
WTC11_00002413	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	98.4287672493272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	174874771	False	NA	19	True	AATAAA	-25	NA	174875545	174958187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
WTC11_00002418	chr1	+	7120	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	-254	-6062	230	2789	multi-exon	FALSE	canonical	3	2912	junction_4	121.727153913989	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGGAGGGCAGCAATTTC	174999029	False	NA	NA	False	NA	NA	NA	174999700	175014816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
WTC11_00002419	chr1	+	2871	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	-2	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	112.51915392501	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	174950659	True	NA	NA	False	NA	NA	NA	174999944	175012027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
WTC11_00002420	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	1223.10146758149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	175000111	False	NA	NA	False	NA	NA	NA	175000212	175010079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
WTC11_00002428	chr1	+	7512	19	FSM	ENSG00000116191.19	ENST00000367634.7	7441	19	-72	1	-18	1	multi-exon	FALSE	canonical	2	8	junction_14	22.6023734141045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGGTGAGGATGTTTT	178721431	True	NA	-73	True	AATAAA	-15	NA	178725146	178921841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
WTC11_00002429	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	11.6702144717728	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	178721528	True	NA	-74	True	AATAAA	-14	NA	178725243	178921840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
WTC11_00002430	chr1	+	601	3	FSM	ENSG00000116199.12	ENST00000440702.5	603	3	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	37.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTATGATAGACACAAT	179025794	False	NA	NA	False	NA	NA	NA	179025805	179050316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179025859_179043714_179044225_179050278
WTC11_00002431	chr1	+	6004	8	FSM	ENSG00000116199.12	ENST00000263733.5	5991	8	-13	0	-13	0	multi-exon	FALSE	canonical	3	57	junction_4	14.6133849743365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATCTTTTCCTCTTC	179025849	False	NA	13	True	AATAAA	-19	NA	179025880	179076567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179026099_179043714_179044225_179050278_179050366_179054528_179054639_179063926_179064099_179064304_179064497_179066799_179066860_179071912
WTC11_00002434	chr1	+	1753	5	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	123.7770172528	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179079335	True	NA	19	True	ATTAAA	-20	NA	179082081	179095996	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_179082388_179082939_179083054_179087910_179088090_179094092_179094218_179094967
WTC11_00002439	chr1	+	579	8	FSM	ENSG00000143337.19	ENST00000531630.6	579	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	61.6265911331616	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTCTGAAATCAGAGCT	179880272	True	NA	NA	False	NA	NA	NA	179882793	179914002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997
WTC11_00002445	chr1	+	2519	13	FSM	ENSG00000116260.17	ENST00000367600.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	164.450853854072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	180146212	True	NA	35	True	AATAAA	-19	NA	180154896	180198034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196600_180197332
WTC11_00002448	chr1	+	4149	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	-23	0	-13	0	multi-exon	FALSE	canonical	3	23	junction_10	44.2877893332199	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	180624396	True	NA	NA	False	AATAAA	-19	NA	180632008	180886126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
WTC11_00002455	chr1	+	4512	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	-19	0	-19	0	multi-exon	TRUE	canonical	3	773	junction_11	101.215832352418	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	182825445	True	NA	7	True	AATAAA	-21	NA	182839327	182887982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
WTC11_00002457	chr1	+	316	3	FSM	ENSG00000135829.17	ENST00000479271.1	316	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGTAAGTGTTACTGT	182853980	True	NA	NA	False	NA	NA	NA	182854040	182856572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182854179_182855576_182855714_182856531
WTC11_00002464	chr1	+	5384	23	FSM	ENSG00000058085.15	ENST00000264144.5	5398	23	0	14	0	-14	multi-exon	FALSE	canonical	3	25	junction_22	8.57875523151897	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTATTTCTAGAA	183186217	False	NA	NA	False	NA	NA	NA	183186263	183245113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291_183240392_183243146
WTC11_00002465	chr1	+	1190	8	FSM	ENSG00000116698.22	ENST00000440812.7	1190	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	104.994849241984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCACTTTCTAAAGCA	183472181	False	NA	NA	False	NA	NA	NA	183472215	183529014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527625_183527732_183527955_183528028_183528891
WTC11_00002470	chr1	+	5812	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	-24	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	50.0002721081031	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	183466131	True	NA	7	True	ATTAAA	-14	NA	183472477	183554186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00002471	chr1	+	5970	24	FSM	ENSG00000116698.22	ENST00000367537.7	5970	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	82.3660280145186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTATCGATTCTTTCT	183466131	True	NA	14	True	ATTAAA	-21	NA	183472477	183554193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183502252_183502392_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00002472	chr1	+	5796	23	NIC	ENSG00000116698.22	novel	5970	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_18	56.1900001397266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	183466159	True	NA	7	True	ATTAAA	-14	NA	183472505	183554186	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00002473	chr1	+	5629	22	FSM	ENSG00000116698.22	ENST00000515829.6	5629	22	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_17	44.3368879962071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	183466180	False	NA	11	True	ATTAAA	-18	NA	183472526	183554190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00002479	chr1	+	1967	5	FSM	ENSG00000198860.14	ENST00000361641.6	1967	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	177.136070578524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTGTCTTGAAATC	184048451	True	NA	11	True	AATAAA	-13	NA	184051675	184074206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072311_184072826
WTC11_00002480	chr1	+	1857	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	-23	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	168.674798058275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048451	True	NA	17	True	AATAAA	-19	NA	184051675	184074212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
WTC11_00002481	chr1	+	773	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	-10	1456	0	184	multi-exon	FALSE	canonical	3	122	junction_3	155.982905046248	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGGAAGAATTTTGGAA	184048451	True	NA	NA	False	AATAAA	-20	NA	184051675	184096029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
WTC11_00002483	chr1	+	2368	4	FSM	ENSG00000198860.14	ENST00000647437.1	2368	4	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	91.6963588275032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATAGGAGGCAGAAAATG	184048487	True	NA	-35	True	AGTAAA	-24	NA	184051711	184074127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156
WTC11_00002484	chr1	+	1925	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	-18	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	111.777401562212	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048487	True	NA	17	True	AATAAA	-19	NA	184051711	184074212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
WTC11_00002490	chr1	+	3823	19	NNC	ENSG00000116668.13	novel	3838	19	NA	NA	60	24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	12.5028391837343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAGCTTTGGGTTTGCCA	185156580	True	NA	27	True	AATAAA	-42	NA	185157226	185291805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182079_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
WTC11_00002497	chr1	+	1662	14	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	39.4523156113883	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGTTTAGCCTGCT	186374221	True	NA	6	True	ATTAAA	-13	NA	186375852	186419233	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399044_186406082_186406269_186417543_186417655_186419008
WTC11_00002501	chr1	+	1363	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	64	junction_4	5.11737237261468	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	192807938	True	NA	14	True	AATAAA	-25	NA	192809023	192812275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
WTC11_00002511	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	338	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	200406570	True	NA	27	True	AATAAA	-20	NA	200411799	200475513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200411963_200473908
WTC11_00002512	chr1	+	417	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	54	12	0	-11	multi-exon	FALSE	canonical	3	307	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAACTAATTTTATGCC	200406491	True	NA	9	True	AATAAA	-11	NA	200411720	200415539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200411963_200415364
WTC11_00002513	chr1	+	8042	17	FSM	ENSG00000118200.15	ENST00000358823.7	8017	17	-25	0	-25	0	multi-exon	FALSE	canonical	3	48	junction_8	10.5999705188269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCCTTTTCTGTTTCTT	NA	False	NA	22	True	AATAAA	-15	NA	200738867	200860704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847209_200847293_200847639_200847710_200848031_200850235_200852540_200852678_200853274_200853496_200854816_200854890_200856009_200856126_200857305_200857425_200857753
WTC11_00002518	chr1	+	708	5	FSM	ENSG00000163362.11	ENST00000451872.6	708	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	72.6373698587717	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAGAACCTCAGCAGG	200890671	False	NA	NA	False	NA	NA	NA	200891073	200901009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200891403_200898391_200898456_200899472_200899598_200900103_200900221_200900936
WTC11_00002519	chr1	+	4298	10	FSM	ENSG00000163362.11	ENST00000367342.8	4298	10	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	15.8285567843864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	200890938	False	NA	-2	True	AATAAA	-23	NA	200891340	200915735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200891702_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
WTC11_00002521	chr1	+	3584	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	-37	-51	-25	51	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGAAGAGGCAGAGCC	201023614	True	NA	59	True	NA	NA	NA	201023923	201028843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201024086_201025421
WTC11_00002523	chr1	+	759	1	NIC	ENSG00000134369.16	novel	13891	34	NA	NA	-77	-5932	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGGAGCAGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	201622849	201623608	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201622800_201623600
WTC11_00002527	chr1	+	11647	27	FSM	ENSG00000134369.16	ENST00000367295.5	11645	27	-2	0	-2	0	multi-exon	FALSE	canonical	3	24	junction_10	23.4109163835412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	201738913	True	NA	16	True	AATAAA	-19	NA	201739865	201826969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201740077_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
WTC11_00002530	chr1	+	847	7	FSM	ENSG00000198700.10	ENST00000464348.5	838	7	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	404.687121943195	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACATGGAGGAGCTGGA	201814716	True	NA	NA	False	NA	NA	NA	201829139	201853073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201829373_201834953_201835065_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010
WTC11_00002533	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	7.21110255092798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	201887876	True	NA	NA	False	NA	NA	NA	201888897	201892587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
WTC11_00002535	chr1	+	2523	3	FSM	ENSG00000134375.11	ENST00000482943.1	2523	3	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_2	15	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTCCTCTGCATAAAC	201962200	False	NA	NA	False	AATAAA	-23	NA	201962215	201970351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201963745_201965432_201965544_201969468
WTC11_00002537	chr1	+	2286	10	FSM	ENSG00000176393.11	ENST00000367286.7	2282	10	-4	0	0	0	multi-exon	FALSE	canonical	2	47	junction_3	172.220860209668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	201978894	True	NA	16	True	AATAAA	-24	NA	201982647	202006147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
WTC11_00002550	chr1	+	350	5	FSM	ENSG00000077157.22	ENST00000466273.6	350	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.41774882649672	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAACTTCAGGAAGCC	NA	False	NA	NA	False	NA	NA	NA	202496818	202564479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202496823_202501858_202502006_202558876_202558894_202562777_202562923_202564442
WTC11_00002554	chr1	+	704	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	-2	3	-2	0	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTCTTTTTTCCGCG	NA	False	NA	22	True	NA	NA	NA	202810890	202811912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202811371_202811688
WTC11_00002559	chr1	+	2992	8	NNC	ENSG00000163444.12	novel	3031	8	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	475	junction_3	361.555708864132	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTCTGACTCAGCTCT	202986646	True	NA	NA	False	AATAAA	-14	NA	203007404	203024843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203007575_203007773_203007864_203008642_203008811_203014891_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
WTC11_00002563	chr1	+	916	3	FSM	ENSG00000143847.16	ENST00000601609.1	558	3	-42	-316	-42	316	multi-exon	FALSE	canonical	3	17	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTTGATTGCCAAATT	NA	False	NA	NA	False	NA	NA	NA	203045366	203046823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203045560_203045840_203045988_203046247
WTC11_00002564	chr1	+	4547	5	FSM	ENSG00000143847.16	ENST00000486360.1	4547	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGCCTCCAGTCTTT	NA	False	NA	11	True	AATAAA	-23	NA	203062958	203078735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203064004_203067694_203067793_203068452_203068629_203071691_203071761_203075576
WTC11_00002578	chr1	+	11834	18	FSM	ENSG00000058673.17	ENST00000639812.1	11825	18	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	126.853892469258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGATCCTTTTCTAAAA	203787324	True	NA	NA	False	AATATA	-12	NA	203795685	203854999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203795776_203796450_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00002579	chr1	+	4653	20	NIC	ENSG00000058673.17	novel	3004	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	142.545128199484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787329	True	NA	8	True	AATAAA	-18	NA	203795690	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796450_203796602_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00002582	chr1	+	6116	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_16	135.284941630984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787352	True	NA	8	True	AATAAA	-18	NA	203795713	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796602_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00002583	chr1	+	12481	17	FSM	ENSG00000257315.3	ENST00000550078.2	12481	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	102.064317956865	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGATCCTTTTCTAAAA	203787352	True	NA	NA	False	AATATA	-12	NA	203795713	203854999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00002585	chr1	+	1075	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	-112	4	-108	0	multi-exon	FALSE	canonical	3	4258	junction_1	357.044348319178	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	203861473	False	NA	19	True	AATAAA	-21	NA	203861490	203870077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
WTC11_00002586	chr1	+	546	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	-61	-7	-51	0	multi-exon	FALSE	canonical	1	3	junction_1	2239.64347361112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203861531	False	NA	26	True	AATAAA	-28	NA	203861547	203870084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
WTC11_00002587	chr1	+	536	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	-4	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	1954.97858044532	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838067	True	NA	26	True	AATAAA	-28	NA	203861598	203870084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
WTC11_00002589	chr1	+	354	3	FSM	ENSG00000182004.13	ENST00000367208.1	355	3	34	-33	34	0	multi-exon	FALSE	canonical	3	4367	junction_1	348.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203863621	False	NA	26	True	AATAAA	-28	NA	203863658	203870084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203863726_203865040_203865120_203869876
WTC11_00002591	chr1	+	723	3	FSM	ENSG00000143842.15	ENST00000534185.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	120	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAACTCTATGGAAG	204064448	True	NA	NA	False	NA	NA	NA	204073152	204114570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204073712_204114320_204114433_204114518
WTC11_00002598	chr1	+	9919	10	FSM	ENSG00000198625.14	ENST00000454264.6	9926	10	4	3	0	-3	multi-exon	TRUE	canonical	2	4	junction_8	9.10162107389884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTGTGTTGTCATTA	204512996	True	NA	7	True	ATTAAA	-14	NA	204516382	204558116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204546796_204546878_204549112
WTC11_00002603	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	11.1586538415508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827626	True	NA	3	True	ATTAAA	-14	NA	204828694	204977139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
WTC11_00002605	chr1	+	769	4	FSM	ENSG00000163531.17	ENST00000471392.1	769	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.2736184954957	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTGTGTATA	NA	False	NA	NA	False	AATATA	-24	NA	204979387	204984329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204979560_204980369_204980441_204981797_204982021_204984026
WTC11_00002606	chr1	+	2728	6	FSM	ENSG00000163531.17	ENST00000425360.5	2728	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTAGCAATGCTTGCAT	NA	False	NA	17	True	ATTAAA	-31	NA	204981855	205018371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
WTC11_00002614	chr1	+	3057	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	-76	5	-3	0	multi-exon	FALSE	canonical	3	101	junction_3	21.9048447203403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGCGAGCAGTCTC	NA	False	NA	11	True	AATATA	-15	NA	205504592	205532785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
WTC11_00002617	chr1	+	3229	16	NIC	ENSG00000117266.16	novel	3141	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	37.4494622420966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGCGAGCAGTCTC	NA	False	NA	11	True	AATATA	-15	NA	205504592	205532785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_205504879_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
WTC11_00002625	chr1	+	2484	12	FSM	ENSG00000266028.8	ENST00000605476.5	2484	12	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	9.46590226999645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGTTTCCCAGATCTC	NA	False	NA	7	True	AATAAA	-24	NA	206406376	206456159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877
WTC11_00002627	chr1	+	2499	1	FSM	ENSG00000266028.8	ENST00000604247.1	2499	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGTTTCCCAGATCTC	206453647	False	NA	7	True	AATAAA	-24	NA	206453660	206456159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206453700_206456200
WTC11_00002630	chr1	+	2487	21	FSM	ENSG00000263528.8	ENST00000584998.5	2487	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.7	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	206470003	True	NA	NA	False	NA	NA	NA	206470494	206496274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206470699_206471155_206471246_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
WTC11_00002632	chr1	+	1593	1	FSM	ENSG00000261000.1	ENST00000562504.1	509	1	-1245	161	-1245	-161	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACAAACAGAAAAAAGTCAA	NA	False	NA	NA	False	AATAAA	-31	NA	206502702	206504295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206502700_206504300
WTC11_00002640	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.1219603650999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	207051550	True	NA	NA	False	AATAAA	-16	NA	207053310	207081024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
WTC11_00002641	chr1	+	2522	1	NIC	ENSG00000123836.15	novel	3494	15	NA	NA	7790	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAATATGCGAGTAATA	NA	False	NA	NA	False	AATAAA	-6	NA	207078434	207080956	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_207078400_207081000
WTC11_00002642	chr1	+	1711	10	FSM	ENSG00000196352.17	ENST00000367063.6	1691	10	-22	2	-22	-2	multi-exon	FALSE	canonical	3	6	junction_9	27.446018848228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTGATATATTGGT	NA	False	NA	4	True	AATAAA	-15	NA	207321509	207340764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390
WTC11_00002645	chr1	+	3793	18	FSM	ENSG00000117322.18	ENST00000367059.3	3877	18	81	3	-17	0	multi-exon	TRUE	canonical	1	2	junction_13	6.32947736681507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGCCTTATTTTGT	207453752	True	NA	NA	False	AATAAA	-23	NA	207454310	207489892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473800_207473886_207474240_207474324_207474823_207475217_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
WTC11_00002649	chr1	+	3340	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	-20	0	-20	0	multi-exon	FALSE	canonical	3	64	junction_11	272.761138890585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738327	True	NA	14	True	AATAAA	-15	NA	207752033	207795504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
WTC11_00002650	chr1	+	3211	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	-23	0	-20	0	multi-exon	FALSE	canonical	3	143	junction_6	222.804420961524	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738327	True	NA	23	True	AATAAA	-24	NA	207752033	207795513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
WTC11_00002651	chr1	+	7844	9	FSM	ENSG00000117335.20	ENST00000469535.5	7826	9	-18	0	-4	0	multi-exon	FALSE	canonical	3	384	junction_8	153.20411221635	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738343	True	NA	23	True	AATAAA	-24	NA	207752049	207795513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207761447_207767012_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
WTC11_00002652	chr1	+	3394	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	-23	0	-20	0	multi-exon	FALSE	canonical	3	41	junction_6	325.560381696203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738327	True	NA	23	True	AATAAA	-24	NA	207752033	207795513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
WTC11_00002653	chr1	+	3301	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	-23	0	-20	0	multi-exon	FALSE	canonical	3	41	junction_6	278.463180789769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738327	True	NA	23	True	AATAAA	-24	NA	207752033	207795513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
WTC11_00002661	chr1	+	4994	2	NIC	ENSG00000117335.20	novel	3320	13	NA	NA	12336	0	intron_retention	FALSE	canonical	3	384	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	NA	False	NA	14	True	AATAAA	-15	NA	207782674	207795504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_207785683_207793518
WTC11_00002666	chr1	+	3351	2	FSM	ENSG00000230937.13	ENST00000433108.1	3348	2	-3	0	0	0	multi-exon	TRUE	canonical	3	107	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTCTCTGCCTCTAT	209418098	True	NA	16	True	ACTAAA	-17	NA	209428816	209432545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209431826_209432203
WTC11_00002667	chr1	+	976	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	28.7402157263998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTCTCTGCCTCTAT	209418099	True	NA	16	True	ACTAAA	-17	NA	209428817	209432545	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
WTC11_00002668	chr1	+	844	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-1	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	62.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418100	True	NA	20	True	ACTAAA	-21	NA	209428818	209432549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209432203
WTC11_00002669	chr1	+	1639	3	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	49.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTTTCTATCGCAGAT	209448909	True	NA	7	True	AATAAA	-22	NA	209449130	209457926	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_209449405_209451327_209451482_209456715
WTC11_00002670	chr1	+	1464	2	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACGCTCTAAAGGTCT	209448915	True	NA	-8	True	AATAAA	-7	NA	209449136	209457911	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_209449405_209456715
WTC11_00002671	chr1	+	1553	3	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	107	junction_1	17	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTTTCTATCGCAGAT	209448942	False	NA	7	True	AATAAA	-22	NA	209449163	209457926	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_209449405_209451380_209451482_209456715
WTC11_00002673	chr1	+	1541	3	FSM	ENSG00000117597.18	ENST00000457820.1	2895	3	104	1250	104	-1250	multi-exon	FALSE	canonical	3	105	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAGTTAAGAGACACCA	209838885	False	NA	NA	False	NA	NA	NA	209838908	209843382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209839129_209840852_209841056_209842264
WTC11_00002686	chr1	+	6397	3	FSM	ENSG00000117625.14	ENST00000486666.5	4086	3	-495	-1816	-495	18	multi-exon	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATTCTTTTTAGGAATA	NA	False	NA	NA	False	AATAAA	-36	NA	211300965	211316403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211304141_211312719_211312962_211313423
WTC11_00002689	chr1	+	4000	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	53	junction_8	18.0124956627337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	211325442	True	NA	20	True	AGTAAA	-22	NA	211326808	211374946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
WTC11_00002693	chr1	+	3508	6	FSM	ENSG00000153363.14	ENST00000423222.6	3536	6	28	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	46.3577393754268	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTTTCTTTTTTCCA	211382369	True	NA	NA	False	AATAAA	-19	NA	211382802	211435333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
WTC11_00002697	chr1	+	4467	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	-58	0	58	multi-exon	FALSE	canonical	3	358	junction_10	15.0829339970439	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTAAACAAGTATTT	212029167	True	NA	66	True	GATAAA	-22	NA	212035747	212105071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
WTC11_00002700	chr1	+	916	4	FSM	ENSG00000117691.10	ENST00000366988.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_2	26.6374840320094	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTCCCCAGAGGCCA	212428103	True	NA	10	True	AATAAA	-22	NA	212432919	212446379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212433121_212442564_212442626_212444338_212444443_212445829
WTC11_00002702	chr1	+	2004	4	FSM	ENSG00000162772.17	ENST00000341491.9	1940	4	-64	0	27	0	multi-exon	FALSE	canonical	2	5	junction_3	3.2659863237109	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	212607866	True	NA	14	True	AATAAA	-24	NA	212608696	212620775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212608931_212615017_212615262_212618126_212618235_212619357
WTC11_00002703	chr1	+	2335	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	-14	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	83.003049177964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	212789606	True	NA	14	True	AATAAA	-10	NA	212791869	212816617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
WTC11_00002704	chr1	+	2572	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	14	-1205	-9	-28	multi-exon	FALSE	canonical	3	49	junction_8	109.276520921428	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACTTTTAAGCTC	212789578	True	NA	-13	True	AATGAA	-29	NA	212791841	212816802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
WTC11_00002706	chr1	+	2551	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	-24	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.166646668264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	212789606	True	NA	15	True	ATTAAA	-26	NA	212791869	212816830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
WTC11_00002708	chr1	+	516	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	-18	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	21.918029108476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	212789642	True	NA	5	True	ATTAAA	-24	NA	212791905	212804498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
WTC11_00002719	chr1	+	3373	4	ISM	ENSG00000162769.13	ENST00000483790.1	599	6	2166	6	2166	-6	3prime_fragment	FALSE	canonical	3	440	junction_1	17.326921891156	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAACACACTTACTTGA	212885545	False	NA	-6	True	NA	NA	NA	212885574	212895388	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_212888595_212889145_212889258_212894985_212895054_212895215
WTC11_00002726	chr1	+	1195	5	NIC	ENSG00000143494.16	novel	4473	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	308	junction_3	528.194743915537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGAGCTGGAGAAAT	212922179	True	NA	NA	False	NA	NA	NA	212950634	212972918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951338_212951819_212961165_212961361_212966270_212966346_212972579
WTC11_00002727	chr1	+	4247	6	FSM	ENSG00000143494.16	ENST00000366965.6	3572	6	0	-675	0	0	multi-exon	FALSE	canonical	3	133	junction_3	560.49813559012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922179	True	NA	17	True	AATAAA	-19	NA	212950634	212991585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212950741_212951338_212951819_212961165_212961255_212972579_212972962_212973954_212974071_212988511
WTC11_00002736	chr1	+	1857	12	FSM	ENSG00000143499.14	ENST00000366957.10	1745	12	-113	1	-56	0	multi-exon	FALSE	canonical	3	41	junction_2	10.2287877665711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTTTGTATTTTCT	214281034	False	NA	7	True	ATTAAA	-12	NA	214281045	214337130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
WTC11_00002737	chr1	+	379	3	FSM	ENSG00000143499.14	ENST00000484459.1	463	3	84	0	84	0	multi-exon	FALSE	canonical	3	62	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTTACAACTGCCCT	NA	False	NA	NA	False	TATAAA	-2	NA	214327577	214331070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_214327725_214330167_214330279_214330949
WTC11_00002749	chr1	+	5845	7	FSM	ENSG00000092969.12	ENST00000366930.9	5868	7	23	0	23	0	multi-exon	FALSE	canonical	3	7	junction_4	3.18416219575713	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTGCTTTGTC	218345234	False	NA	NA	False	AATAAA	-33	NA	218345358	218444619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_218347048_218405168_218405333_218434081_218434215_218434337_218434449_218435969_218436148_218437342_218437497_218441203
WTC11_00002754	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_8	48.5148865285289	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	220085146	True	NA	14	True	AATAAA	-18	NA	220094131	220148041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
WTC11_00002755	chr1	+	446	3	FSM	ENSG00000067704.10	ENST00000467924.1	656	3	0	210	0	-210	multi-exon	FALSE	canonical	3	554	junction_1	51.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGCAATATGTACCT	220140166	False	NA	NA	False	AATAGA	-2	NA	220140180	220143134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220140290_220141802_220141949_220142943
WTC11_00002758	chr1	+	5370	18	FSM	ENSG00000116141.17	ENST00000366917.6	5370	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	8.66724334874913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCACAGCATTTTATT	220526487	True	NA	NA	False	ATTAAA	-19	NA	220528135	220664461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220657789_220657835_220661811
WTC11_00002759	chr1	+	5273	17	FSM	ENSG00000116141.17	ENST00000402574.5	5273	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	17.1444916445487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGGGCACAGCATT	220526534	True	NA	NA	False	ATTAAA	-14	NA	220528182	220664456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
WTC11_00002767	chr1	+	2891	2	FSM	ENSG00000162817.7	ENST00000294889.6	2891	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGGTGTGAAGGGTT	220688446	True	NA	17	True	AATAAA	-18	NA	220690362	220699153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220690712_220696611
WTC11_00002768	chr1	+	1597	8	NNC	ENSG00000117791.16	novel	2146	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	11.1281954823717	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAAGCTGCAAAAATGT	220747740	True	NA	NA	False	AATAAA	-19	NA	220748302	220784240	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_220748804_220754946_220755121_220761657_220761821_220762909_220763051_220780017_220780080_220780167_220780240_220781777_220781940_220783918
WTC11_00002769	chr1	+	2146	8	FSM	ENSG00000117791.16	ENST00000366913.8	2146	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1.9059520091609	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTATTTATGAGTCT	220747759	True	NA	13	True	AATAAA	-23	NA	220748321	220784815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220748804_220754946_220755121_220761657_220761821_220762909_220763051_220780017_220780080_220780167_220780240_220781777_220781933_220783918
WTC11_00002782	chr1	+	4028	12	FSM	ENSG00000162819.12	ENST00000612948.4	4028	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	30.3325916417058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTGTTTTTCGACAA	222712203	True	NA	26	True	AATAAA	-27	NA	222712552	222735196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
WTC11_00002784	chr1	+	3734	12	FSM	ENSG00000162819.12	ENST00000539697.5	3734	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	32.4302175179949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTGTTTTTCGACAA	222712003	False	NA	26	True	AATAAA	-27	NA	222713320	222735196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222713417_222715683_222715801_222718924_222719032_222719262_222719360_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
WTC11_00002786	chr1	+	4097	14	NNC	ENSG00000162819.12	novel	566	7	NA	NA	1476	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_1	24.0337533850863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222714866	False	NA	17	True	AATAAA	-18	NA	222714876	222735187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_222715270_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627_222733077_222733097
WTC11_00002787	chr1	+	4098	14	NNC	ENSG00000162819.12	novel	566	7	NA	NA	1476	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	33.3544706157836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222714866	False	NA	17	True	AATAAA	-18	NA	222714876	222735187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_222715270_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627_222733064_222733083
WTC11_00002791	chr1	+	548	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_1	43.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813337	True	NA	4	True	AATAAA	-17	NA	222815016	222837384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222815079_222835118_222835216_222836995
WTC11_00002792	chr1	+	424	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	29.2489316044193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	222813460	True	NA	0	True	AATAAA	-13	NA	222815139	222837380	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995_222837067_222837218
WTC11_00002793	chr1	+	4759	8	FSM	ENSG00000154309.9	ENST00000284476.7	4762	8	3	0	3	0	multi-exon	FALSE	canonical	2	11	junction_1	4.73372615022311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCCTCAATTATTCTT	222928358	True	NA	17	True	AATAAA	-34	NA	222928426	223005995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222928571_222942806_222943333_222983079_222983110_222990624_222990749_222991519_222991648_222992012_222992111_222994884_222994983_223002384
WTC11_00002797	chr1	+	513	4	FSM	ENSG00000162909.18	ENST00000480581.1	513	4	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_3	38.1313519298752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGCCACCCCTGGGGC	223751994	False	NA	NA	False	GGGGCT	-19	NA	223752018	223757497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223752072_223752795_223752957_223755479_223755650_223757368
WTC11_00002799	chr1	+	2905	1	FSM	ENSG00000185495.10	ENST00000540997.2	1886	1	-1023	4	-1023	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTGGTGGACTC	NA	False	NA	8	True	AATAAA	-18	NA	224007703	224010608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224007700_224010600
WTC11_00002800	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	16.8077363139716	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	224109320	True	NA	5	True	AATAAA	-17	NA	224114110	224162047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
WTC11_00002801	chr1	+	1946	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	-112	-1206	-52	1206	multi-exon	FALSE	canonical	3	165	junction_1	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACTCCAGCCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	224114058	224135571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224114397_224130471_224130582_224134073
WTC11_00002802	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	7	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	224181336	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224183419_224189576_224190320_224192331
WTC11_00002807	chr1	+	4148	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	-55	-2568	-25	0	multi-exon	FALSE	canonical	3	44	junction_1	1741.56066663081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338418	True	NA	NA	False	AATAAA	-24	NA	224356832	224379452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
WTC11_00002808	chr1	+	830	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	-22	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	1577.84734686217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338456	True	NA	NA	False	AATAAA	-24	NA	224356870	224379452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
WTC11_00002814	chr1	+	1159	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_6	56.0010932837886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGCCTGTCTTTACTT	224925438	True	NA	1	True	AATAAA	-14	NA	224929670	224969827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
WTC11_00002815	chr1	+	1063	8	NIC	ENSG00000185842.16	novel	2215	11	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	80.8533568018202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCCTGTCTTTAC	224925463	True	NA	-1	True	AATAAA	-12	NA	224929695	224969825	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967515_224968758_224968875_224969633
WTC11_00002816	chr1	+	1123	8	NNC	ENSG00000185842.16	novel	1984	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	90.6022930736528	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	224925472	True	NA	3	True	AATAAA	-16	NA	224929704	224969829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969637
WTC11_00002821	chr1	+	1109	2	FSM	ENSG00000185842.16	ENST00000474127.1	773	2	0	-336	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	3	True	AATAAA	-16	NA	224967545	224969829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224967584_224968758
WTC11_00002823	chr1	+	4047	3	FSM	ENSG00000143742.14	ENST00000651653.1	522	3	-241	-3284	-176	-1	multi-exon	FALSE	canonical	3	802	junction_2	3320.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTGTTTGTGTTGAAG	NA	False	NA	11	True	AATAAA	-15	NA	225777636	225790463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225786861
WTC11_00002826	chr1	+	1493	3	FSM	ENSG00000143742.14	ENST00000304786.12	1481	3	-13	1	0	-1	multi-exon	FALSE	canonical	3	6096	junction_2	673.5	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTGTTTGTGTTGAAG	225760872	True	NA	11	True	AATAAA	-15	NA	225777812	225790463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225789239
WTC11_00002827	chr1	+	1415	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	5	0	-1	multi-exon	FALSE	canonical	3	97	junction_2	3673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTGTTTGTGTTGAAG	225760931	True	NA	11	True	AATAAA	-15	NA	225777871	225790463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225789258
WTC11_00002829	chr1	+	3508	9	FSM	ENSG00000143819.13	ENST00000614058.4	1789	9	-412	-1307	-124	1303	multi-exon	FALSE	canonical	3	19	junction_1	98.0617630628779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCACTCAGCCAAGGGC	225809986	False	NA	NA	False	NA	NA	NA	225809999	225846866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225810616_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
WTC11_00002831	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	20.4935203174076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	225796016	True	NA	30	True	GATAAA	-17	NA	225810123	225845563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
WTC11_00002834	chr1	+	1825	3	FSM	ENSG00000163041.13	ENST00000366814.3	1863	3	0	38	0	-38	multi-exon	FALSE	canonical	3	4488	junction_1	550	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTTTCTAAAATTATTC	225971695	True	NA	NA	False	ACTAAA	-18	NA	226062713	226067231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062812_226064328_226064480_226065655
WTC11_00002836	chr1	+	567	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	-8	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2401.73664020202	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	225971731	True	NA	NA	False	NA	NA	NA	226062749	226071542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
WTC11_00002838	chr1	+	895	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2570.68239967523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTATAATAATTATAAATA	226062702	True	NA	NA	False	NA	NA	NA	226063493	226071752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
WTC11_00002843	chr1	+	2316	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	-86	-283	17	0	multi-exon	FALSE	canonical	3	33	junction_10	29.3838343689557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	8	True	AATAAA	-8	NA	226870533	226896086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
WTC11_00002847	chr1	+	2465	13	FSM	ENSG00000143801.18	ENST00000366782.6	2465	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	45.496336848879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGAGTTTGGTCCGTTG	226870032	False	NA	20	True	AATAAA	-20	NA	226871267	226896098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226871405_226875364_226875551_226880468_226880725_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
WTC11_00002850	chr1	+	2979	16	NNC	ENSG00000163050.18	novel	2866	15	NA	NA	-34	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	92.0093231990952	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCGCGTGTACCCTCT	226936818	True	NA	21	True	AATAAA	-18	NA	226940251	226987543	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_226940400_226940508_226940581_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
WTC11_00002852	chr1	+	3612	8	FSM	ENSG00000163050.18	ENST00000478406.5	3612	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	99.1564420499243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCGCGTGTACCCTCT	226936860	True	NA	21	True	AATAAA	-18	NA	226940293	226987543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226940400_226977448_226977524_226982026_226982764_226982893_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
WTC11_00002854	chr1	+	8610	5	FSM	ENSG00000181450.18	ENST00000465266.1	533	5	29	-8106	0	-2	multi-exon	FALSE	canonical	3	32	junction_3	13.3486890742125	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATACTTGTTTTCTTTAA	227558727	True	NA	16	True	AATAAA	-16	NA	227563579	227662459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227650955_227651077_227654335
WTC11_00002855	chr1	+	8548	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	-5	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	227558698	True	NA	18	True	AATAAA	-18	NA	227563550	227662461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
WTC11_00002859	chr1	+	2362	5	FSM	ENSG00000143740.15	ENST00000366759.9	2362	5	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_1	49.443781206538	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227734953	False	NA	15	True	AATAAA	-18	NA	227734995	227781226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
WTC11_00002860	chr1	+	1393	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	4	0	2	multi-exon	FALSE	canonical	2	3	junction_4	121.004906925298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGTGTCTCCCTAG	227732483	True	NA	4	True	AATGAA	-16	NA	227735434	227770740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
WTC11_00002861	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	144.319860803086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227732483	True	NA	-3	True	NA	NA	NA	227735434	227781208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
WTC11_00002865	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1992	junction_1	381.618919866403	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	228053189	True	NA	17	True	AATAAA	-18	NA	228082707	228099212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
WTC11_00002866	chr1	+	1003	8	FSM	ENSG00000143774.17	ENST00000391865.7	990	8	-13	0	-13	0	multi-exon	FALSE	canonical	3	809	junction_1	198.594654345715	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	228125202	True	NA	NA	False	AATAAA	-29	NA	228140214	228148955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00002867	chr1	+	2217	2	FSM	ENSG00000143774.17	ENST00000469973.1	795	2	-14	-1408	0	1408	multi-exon	FALSE	canonical	3	369	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGCCATGCTGGTTG	228125252	True	NA	NA	False	NA	NA	NA	228140264	228143241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228141123
WTC11_00002871	chr1	+	1114	9	FSM	ENSG00000143774.17	ENST00000312726.9	1100	9	-14	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	424.94306603944	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	228125252	True	NA	NA	False	AATAAA	-25	NA	228140264	228148951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00002872	chr1	+	1066	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	-1	0	0	multi-exon	FALSE	canonical	3	88	junction_4	535.069840651667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAAATGAGTGGAATGT	228125277	True	NA	NA	False	AATAAA	-21	NA	228140289	228148947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00002873	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	503.510813080403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	228125277	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
WTC11_00002881	chr1	+	914	7	FSM	ENSG00000143774.17	ENST00000366716.1	940	7	0	26	0	3	multi-exon	FALSE	canonical	3	1316	junction_2	37.7653574353828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATGTGGCCCCAAGGT	228130441	False	NA	NA	False	AATAAA	-32	NA	228145453	228148958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00002884	chr1	+	738	6	FSM	ENSG00000143774.17	ENST00000486668.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	652.15286551544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGAGTGGAATGTGGC	228145458	False	NA	NA	False	AATAAA	-24	NA	228145560	228148950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228145650_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
WTC11_00002900	chr1	+	7506	34	NNC	ENSG00000154358.23	novel	20499	81	NA	NA	-275	0	intron_retention	FALSE	canonical	3	7	junction_2	11.7331048061892	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGATTCTCCTTGCC	NA	False	NA	16	True	AATAAA	-16	NA	228309208	228361250	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317894_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
WTC11_00002904	chr1	+	544	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	-13	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	9.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	229267364	True	NA	NA	False	AATAAA	-16	NA	229271061	229288882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229271371_229286485_229286567_229288728
WTC11_00002906	chr1	+	2999	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	-12	0	12	multi-exon	FALSE	canonical	3	464	junction_5	45.6530840319978	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGTGACACAGCAGAT	229267413	True	NA	NA	False	TTTAAA	-42	NA	229271110	229305906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
WTC11_00002907	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	196.438692726255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	229267496	False	NA	-84	True	NA	NA	NA	229271193	229303894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
WTC11_00002908	chr1	+	430	3	FSM	ENSG00000168118.12	ENST00000489342.1	431	3	1	0	1	0	multi-exon	FALSE	canonical	2	6	junction_2	239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGAGGGTTTGTTTTG	NA	False	NA	5	True	TTTAAA	-17	NA	229286485	229289199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229286567_229288728_229288844_229288965
WTC11_00002911	chr1	+	5482	11	NNC	ENSG00000135763.10	novel	5601	10	NA	NA	0	14766	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.6785668070245	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAGAATCATTGTGG	229623614	True	NA	NA	False	NA	NA	NA	229626246	229674966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099_229660053_229674937
WTC11_00002917	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_14	39.1794734761522	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	230639865	True	NA	8	True	AATAAA	-15	NA	230642566	230693982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
WTC11_00002918	chr1	+	1194	5	FSM	ENSG00000173409.14	ENST00000366658.6	1170	5	-24	0	-24	0	multi-exon	TRUE	canonical	2	3	junction_1	70.414842185437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTAAATTTTCAATT	230976754	True	NA	20	True	AATAAA	-20	NA	230979069	231000595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230979280_230990109_230990264_230995759_230995985_230997120_230997268_231000137
WTC11_00002919	chr1	+	1452	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	146	junction_3	12.0896650077659	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	230976754	True	NA	NA	False	AATAAA	-18	NA	230979069	231000733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
WTC11_00002922	chr1	+	853	6	FSM	ENSG00000116906.13	ENST00000436239.5	839	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	23	junction_1	156.336048306205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAGATCTTGGAAGAA	231235879	True	NA	NA	False	TTTAAA	-44	NA	231241192	231266091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013
WTC11_00002923	chr1	+	1947	13	FSM	ENSG00000116906.13	ENST00000416000.1	1924	13	-23	0	-14	0	multi-exon	FALSE	canonical	3	8	junction_3	112.948611717404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTACTTGGCTGCAGT	231235879	True	NA	NA	False	NA	NA	NA	231241192	231275268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231241457_231250960_231251144_231260506_231260654_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220
WTC11_00002924	chr1	+	2655	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	-19	5	-14	-5	multi-exon	FALSE	canonical	3	339	junction_8	40.1760569936319	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAATTTGAAAGAGA	231235879	True	NA	83	True	ATTAAA	-13	NA	231241192	231277968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
WTC11_00002925	chr1	+	613	4	FSM	ENSG00000116906.13	ENST00000469332.1	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	25.2234458831902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACTTTAATAATCAAC	231274872	False	NA	NA	False	NA	NA	NA	231274895	231277530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231275321_231275404_231275499_231276134_231276197_231277498
WTC11_00002936	chr1	+	989	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	-9	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	690.689188821973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	232944426	True	NA	-23	True	AAGAAA	-31	NA	232950604	232978751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
WTC11_00002937	chr1	+	6362	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	-38	0	-32	0	multi-exon	FALSE	canonical	3	1435	junction_3	45.5686295602578	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	NA	False	NA	8	True	TATAAA	-16	NA	232950572	232983882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
WTC11_00002945	chr1	+	1032	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	-15	-4	3	2	multi-exon	FALSE	canonical	3	655	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTGTTTT	234373671	False	NA	17	True	AGTAAA	-22	NA	234373685	234384050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_234374390_234383722
WTC11_00002946	chr1	+	1417	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	-10	0	-9	0	multi-exon	FALSE	canonical	3	18	junction_1	192	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	235323296	True	NA	58	True	NA	NA	NA	235328560	235343138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235328779_235341707_235341779_235342010
WTC11_00002949	chr1	+	4931	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-14	457	0	-457	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACACTCAATCAGTGGA	235363344	True	NA	NA	False	NA	NA	NA	235367412	235451986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00002950	chr1	+	1796	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	-17	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	49.5441441769077	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	235363344	True	NA	-10	True	NA	NA	NA	235367412	235448940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00002951	chr1	+	2093	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	-22	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.3369115824523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATCTGTCATAAG	NA	False	NA	NA	False	AATAAA	-10	NA	235367390	235449078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00002963	chr1	+	2716	6	FSM	ENSG00000077522.15	ENST00000461367.2	2965	6	135	114	135	-106	multi-exon	FALSE	canonical	3	12	junction_2	5.51361950083609	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAGGAAGTAAACTC	236753920	True	NA	NA	False	AATAAA	-1	NA	236753946	236764489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
WTC11_00002972	chr1	+	4154	16	NNC	ENSG00000174371.17	novel	3449	16	NA	NA	0	705	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_11	38.8154608371458	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTTGTCTTCAAATATT	241844809	True	NA	7	True	AATAAA	-16	NA	241848203	241890644	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872034_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
WTC11_00002973	chr1	+	4023	15	NNC	ENSG00000174371.17	novel	3449	16	NA	NA	0	703	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_10	33.9904698528327	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGTTGTCTTCAAATA	241844830	True	NA	5	True	AATAAA	-14	NA	241848224	241890642	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872034_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
WTC11_00002975	chr1	+	4111	16	NNC	ENSG00000174371.17	novel	3449	16	NA	NA	0	705	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	47.4081099484982	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTTGTCTTCAAATATT	241844856	True	NA	7	True	AATAAA	-16	NA	241848250	241890644	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872281_241878749_241879344_241881915_241882018_241885313_241885508_241889464
WTC11_00002979	chr1	+	681	5	FSM	ENSG00000054282.16	ENST00000490065.5	699	5	18	0	11	0	multi-exon	FALSE	canonical	3	6	junction_1	21.4301189917368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCATTATTTTAAATCA	NA	False	NA	NA	False	NA	NA	NA	243256051	243286397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_243256241_243270091_243270258_243270977_243271064_243274542_243274657_243286271
WTC11_00002980	chr1	+	2585	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	-4	0	3	0	multi-exon	TRUE	canonical	0	0	junction_9	51.8095394083215	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	NA	False	NA	12	True	AATAAA	-16	NA	243256036	243500091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
WTC11_00002981	chr1	+	1625	10	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	41	1606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.1514675612955	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGTTAAAAAAAA	NA	False	NA	-20	True	NA	NA	NA	243256081	243318501	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243318036
WTC11_00002982	chr1	+	556	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	-33	2	-33	-2	multi-exon	FALSE	canonical	3	145	junction_1	50	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTTGTAATGTT	243485404	True	NA	8	True	AATAAA	-12	NA	243487781	243500087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_243487879_243489013_243489141_243499755
WTC11_00002983	chr1	+	510	2	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	2172	-3	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTGAGTTGTAATGT	243487609	False	NA	7	True	AATAAA	-11	NA	243489986	243500086	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_243490166_243499755
WTC11_00002984	chr1	+	3824	2	FSM	ENSG00000179456.10	ENST00000622512.1	3740	2	-84	0	-84	0	multi-exon	FALSE	canonical	3	9	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTTGTGTGTATTT	244048821	True	NA	13	True	AATAAA	-13	NA	244048854	244057472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244048994_244053787
WTC11_00002988	chr1	+	4040	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	-23	0	0	0	multi-exon	FALSE	canonical	3	528	junction_3	48.7801189010441	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	244638540	True	NA	NA	False	ATTAAA	-19	NA	244653102	244709033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
WTC11_00002994	chr1	+	2297	4	FSM	ENSG00000203667.10	ENST00000411948.7	2295	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_1	108.935250901115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	244820726	True	NA	NA	False	AATAAA	-17	NA	244835655	244845057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244835757_244841943_244842059_244842194_244842259_244843040
WTC11_00002995	chr1	+	2782	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	-470	-22	-427	22	multi-exon	FALSE	canonical	3	30	junction_2	860.254355150589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTCTTCATTGTTATT	244835164	False	NA	NA	False	AATAAA	-39	NA	244835188	244845079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
WTC11_00002996	chr1	+	2616	3	FSM	ENSG00000203667.10	ENST00000464757.1	2616	3	0	0	0	0	multi-exon	FALSE	canonical	3	1742	junction_1	110.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTTTTTCCCACACTT	244839735	False	NA	22	True	AATAAA	-13	NA	244839746	244843280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244842059_244842194_244842259_244843040
WTC11_00002998	chr1	+	1233	8	FSM	ENSG00000203666.13	ENST00000366523.6	1418	8	187	-2	-113	2	multi-exon	FALSE	canonical	2	4	junction_1	56.9353374720939	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244969837	False	NA	11	True	AATAAA	-14	NA	244969868	245087839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970044_244970328_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
WTC11_00002999	chr1	+	1405	7	NIC	ENSG00000203666.13	novel	1418	8	NA	NA	0	2	intron_retention	FALSE	canonical	3	56	junction_1	40.8316326176437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244969969	False	NA	11	True	AATAAA	-14	NA	244969981	245087839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
WTC11_00003001	chr1	+	527	7	FSM	ENSG00000203666.13	ENST00000447569.6	527	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	57.6447453517375	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTCCCGGGTTCAAGA	244968488	True	NA	NA	False	NA	NA	NA	244970326	245121981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
WTC11_00003002	chr1	+	1148	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	-5	-283	0	2	multi-exon	FALSE	canonical	3	18	junction_2	57.3695503392039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244968512	True	NA	11	True	AATAAA	-14	NA	244970350	245087839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
WTC11_00003003	chr1	+	930	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	-24	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	48.6028805730689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	244968488	True	NA	18	True	AATGAA	-37	NA	244970326	245087794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
WTC11_00003005	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	66.0623947492066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	244968551	True	NA	14	True	CATAAA	-15	NA	244970389	245122991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
WTC11_00003013	chr1	+	423	2	NNC	ENSG00000289566.1	novel	516	3	NA	NA	7806	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTTGTGTTGTTTGTT	247281170	True	NA	NA	False	AATAAA	-18	NA	247281239	247286485	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_247281377_247286199
WTC11_00003018	chr1	+	3778	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	-13	-1048	-13	248	multi-exon	FALSE	canonical	3	59	junction_1	2	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTTTTGTTACATA	248904973	True	NA	NA	False	NA	NA	NA	248906221	248920194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_248906343_248913815_248913880_248916601
WTC11_00003028	chr1	-	1813	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4745	304	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	98.3656952397532	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTTTTAATAAAGGATC	-200074	False	NA	NA	False	AATAAA	-22	NA	200156	184912	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262_195417_200049
WTC11_00003037	chr1	-	457	3	FSM	ENSG00000237094.12	ENST00000599771.6	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAGAGGGGTGACAGC	-498434	False	NA	NA	False	NA	NA	NA	498456	497133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_497300_498072_498306_498398
WTC11_00003047	chr1	-	2140	1	Genic_Genomic	ENSG00000228327.4	novel	NA	NA	NA	NA	47089	833	mono-exon	FALSE	NA	NA	NA	NA	NA	743	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGGCCTTACTCCGTC	NA	False	NA	NA	False	NA	NA	NA	727191	725051	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_725100_727200
WTC11_00003051	chr1	-	4210	17	FSM	ENSG00000188976.11	ENST00000477976.5	4201	17	0	-9	0	7	multi-exon	TRUE	canonical	2	6	junction_13	510.764011065776	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAGATTTGTGTGGC	-958322	False	NA	-7	True	AATAAA	-36	NA	958458	944195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954524_955922_956014_956094_956216_956893_957026_957098
WTC11_00003053	chr1	-	2773	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	1001	junction_1	262.252211091198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGCTCCTGGAGATTTG	-940507	True	NA	-13	True	AATAAA	-30	NA	959256	944201	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
WTC11_00003054	chr1	-	865	7	FSM	ENSG00000188976.11	ENST00000487214.1	865	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	714.446036372859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCACGGTGGGGATGTG	-959173	False	NA	NA	False	NA	NA	NA	959309	954425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_954524_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
WTC11_00003056	chr1	-	1041	3	FSM	ENSG00000188290.11	ENST00000428771.6	1040	3	0	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_2	7.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCACGAGTTTTCTT	-999629	True	NA	2	True	NA	NA	NA	1000172	998960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525_999614_999691
WTC11_00003057	chr1	-	1837	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	-5	0	0	multi-exon	FALSE	canonical	3	23	junction_9	11.8800590263321	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGAGCTGCTCTCTCCC	-1115098	True	NA	-6	True	TATAAA	-21	NA	1116089	1081817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
WTC11_00003058	chr1	-	3209	9	NIC	ENSG00000131591.18	novel	982	10	NA	NA	-7	1	intron_retention	FALSE	canonical	3	23	junction_8	11.1908165475089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCGTTCCGAGCTGCTC	-1115111	True	NA	-12	True	TATAAA	-15	NA	1116102	1081823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
WTC11_00003069	chr1	-	1056	8	FSM	ENSG00000184163.3	ENST00000330388.2	1036	8	-17	-3	-17	-1	multi-exon	FALSE	canonical	2	6	junction_2	3.49927106111883	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTCGAGTGCTGCCT	-1246724	False	NA	-3	True	AATAAA	-19	NA	1246739	1242449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1246513
WTC11_00003070	chr1	-	2408	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	21	-169	0	166	multi-exon	FALSE	canonical	3	470	junction_5	53.1750254662218	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCAGGGCTCTCTCCC	-1264070	True	NA	NA	False	NA	NA	NA	1273833	1253742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
WTC11_00003071	chr1	-	2455	8	FSM	ENSG00000160087.21	ENST00000450390.6	2455	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	252.351229157187	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGCTTGTGTCTGTGT	-1264090	True	NA	-1	True	AAAAAG	-31	NA	1273853	1253908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1266097_1266291_1267861_1267993_1273665
WTC11_00003072	chr1	-	2392	7	FSM	ENSG00000160087.21	ENST00000347370.6	2387	7	0	-5	0	0	multi-exon	FALSE	canonical	3	27	junction_5	203.422931079288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGCTTGTGTCTGTGT	-1264091	True	NA	-1	True	AAAAAG	-31	NA	1273854	1253908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267732_1267993_1273665
WTC11_00003073	chr1	-	1057	6	FSM	ENSG00000160087.21	ENST00000400929.6	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	217.993944870035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGGGCCTTGTGTGCT	-1264092	True	NA	-121	True	GGGGCT	-4	NA	1273855	1254984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1273665
WTC11_00003082	chr1	-	5329	22	FSM	ENSG00000131584.19	ENST00000492936.5	5319	22	0	-10	0	10	multi-exon	FALSE	canonical	1	2	junction_4	26.8427857606525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCCCGTGCCTTGCTC	-1305694	False	NA	-29	True	AATAAA	-25	NA	1305929	1292379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085
WTC11_00003083	chr1	-	3804	24	FSM	ENSG00000131584.19	ENST00000354700.10	3793	24	0	-11	0	10	multi-exon	TRUE	canonical	3	64	junction_22	18.152056755675	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCCCGTGCCTTGCTC	-1306642	True	NA	-29	True	AATAAA	-25	NA	1307930	1292379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085_1304144_1307768
WTC11_00003086	chr1	-	819	6	FSM	ENSG00000131584.19	ENST00000476572.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	14.7431339951857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCGTGCTGCTCTGCAT	-1299606	False	NA	NA	False	NA	NA	NA	1299617	1296465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344
WTC11_00003095	chr1	-	2129	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	-15	0	0	multi-exon	FALSE	canonical	3	447	junction_10	44.9576189316116	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTGTACATGGCTGT	-1318737	True	NA	-2	True	AGTAAA	-30	NA	1324660	1311584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
WTC11_00003097	chr1	-	1548	14	FSM	ENSG00000127054.22	ENST00000528879.5	1524	14	0	-24	0	0	multi-exon	FALSE	canonical	3	33	junction_7	127.200954557097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGCATTGCGCGTCTAC	-1318725	True	NA	NA	False	NA	NA	NA	1324648	1312259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
WTC11_00003107	chr1	-	2446	2	FSM	ENSG00000127054.22_ENSG00000240731.1	ENST00000496353.1	2428	2	0	-18	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAAACTTTAATTTT	-1318688	True	NA	-16	True	AATGAA	-17	NA	1324611	1318678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1321094_1324580
WTC11_00003108	chr1	-	1104	4	FSM	ENSG00000127054.22	ENST00000429572.5	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	6.48074069840786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAAACTTTAATTTT	-1318743	True	NA	-16	True	AATGAA	-17	NA	1324666	1318678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1319525_1320455_1320530_1320995_1321094_1324580
WTC11_00003116	chr1	-	2926	15	FSM	ENSG00000107404.21	ENST00000378891.9	2926	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_4	29.9919206807842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGCCTGTGCCCCT	-1348960	False	NA	-1	True	AAAAAG	-20	NA	1349112	1335275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
WTC11_00003117	chr1	-	3307	15	FSM	ENSG00000107404.21	ENST00000378888.10	3305	15	0	-2	0	0	multi-exon	FALSE	canonical	3	109	junction_1	18.0295958504513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGCCTGTGCCCCT	-1347641	True	NA	-1	True	AAAAAG	-20	NA	1349418	1335275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
WTC11_00003123	chr1	-	1749	5	FSM	ENSG00000162576.17	ENST00000476718.1	1001	5	0	-748	0	0	multi-exon	FALSE	canonical	3	47	junction_3	4.71036092035419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCCCAGGTATGCTT	-1354864	False	NA	-7	True	AATAAA	-19	NA	1355016	1352690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354510_1354681
WTC11_00003124	chr1	-	2295	10	FSM	ENSG00000162576.17	ENST00000309212.11	2293	10	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_8	16.1986129569292	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	-1358403	True	NA	-5	True	AATAAA	-21	NA	1358555	1352688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
WTC11_00003125	chr1	-	1092	3	FSM	ENSG00000175756.14	ENST00000338370.7	1072	3	0	-20	0	20	multi-exon	FALSE	canonical	3	4380	junction_2	93	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	-1344457	True	NA	-3	True	AATAAA	-42	NA	1375157	1373709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704
WTC11_00003126	chr1	-	1067	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-26	-288	20	multi-exon	FALSE	canonical	3	2275	junction_3	1038.92583416185	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	-1375448	False	NA	-3	True	AATAAA	-42	NA	1375495	1373709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
WTC11_00003127	chr1	-	820	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	-22	0	20	multi-exon	FALSE	canonical	3	212	junction_3	2010.08943969057	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	-1344469	True	NA	-3	True	AATAAA	-42	NA	1375169	1373709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
WTC11_00003128	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	1786.35214893369	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	-1344473	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
WTC11_00003131	chr1	-	5744	7	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	-2060	1	intron_retention	FALSE	canonical	3	846	junction_6	129.734022779943	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTCTCCTAATTT	-1384888	False	NA	0	True	CATAAA	-18	NA	1394776	1385709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1392804_1393395
WTC11_00003132	chr1	-	5027	11	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	846	junction_6	122.861263219943	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTCTCCTAATTT	-1399301	False	14990	0	True	CATAAA	-18	NA	1399311	1385709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00003133	chr1	-	3114	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	-2	0	2	multi-exon	FALSE	canonical	3	404	junction_6	241.646870453561	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTCTCCTAATTTG	-1399325	False	14990	1	True	CATAAA	-19	NA	1399335	1385708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00003134	chr1	-	3120	12	FSM	ENSG00000221978.13	ENST00000488340.5	1598	12	0	-1522	0	1	multi-exon	FALSE	canonical	3	244	junction_6	282.157303293133	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTCTCCTAATTT	-1399318	False	14990	0	True	CATAAA	-18	NA	1399328	1385709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00003135	chr1	-	4948	12	NIC	ENSG00000221978.13	novel	4452	13	NA	NA	-128	0	intron_retention	FALSE	canonical	3	38	junction_11	492.654607187907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-1399074	False	NA	-1	True	CATAAA	-17	NA	1399084	1385710	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1388625_1388744_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1398987
WTC11_00003136	chr1	-	3010	10	NIC	ENSG00000221978.13	novel	3112	11	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	369.433533673473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-1399288	False	14990	-1	True	CATAAA	-17	NA	1399298	1385710	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00003137	chr1	-	1954	3	FSM	ENSG00000221978.13	ENST00000463260.5	1941	3	0	-13	0	0	multi-exon	FALSE	canonical	3	1137	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACGTGGTAGGTGGTCG	NA	False	NA	-4	True	AATAAA	-35	NA	1388713	1386481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953
WTC11_00003148	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	57.2033410057684	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-1392303	True	NA	-22	True	AATGAA	-17	NA	1407293	1401908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
WTC11_00003150	chr1	-	1697	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	-4	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	32.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-1392278	True	NA	-22	True	AATGAA	-17	NA	1407268	1401908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1402257_1405808_1407020_1407130
WTC11_00003157	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1714	junction_2	77.3769183930195	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-1548992	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
WTC11_00003158	chr1	-	2636	3	FSM	ENSG00000160075.12	ENST00000378726.1	2238	3	-398	0	-398	0	multi-exon	FALSE	canonical	3	1714	junction_2	99.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGCCTGGTCCTGAATT	NA	False	NA	-6	True	AATAAA	-15	NA	1546885	1541673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1542168_1543868_1543988_1544862
WTC11_00003159	chr1	-	619	3	FSM	ENSG00000160075.12	ENST00000378725.3	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGTTTTGTTTTT	-1548716	False	25871	NA	False	NA	NA	NA	1574587	1544637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1545003_1564772_1564917_1574477
WTC11_00003160	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-1548713	False	25871	3	True	AATAAA	-31	NA	1574584	1560847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1564917_1574477
WTC11_00003161	chr1	-	2145	1	FSM	ENSG00000228594.4	ENST00000422725.4	2124	1	-25	4	-25	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGAGCTGTCTGTGTG	-1599394	True	NA	-7	True	NA	NA	NA	1600160	1598015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1598000_1600200
WTC11_00003163	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_16	45.9945197265429	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-1652993	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
WTC11_00003165	chr1	-	2534	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_19	57.3586087697392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-1653001	True	NA	NA	False	NA	NA	NA	1659012	1635737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
WTC11_00003169	chr1	-	6478	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	-434	-96	-367	95	multi-exon	FALSE	canonical	3	149	junction_8	21.1538264860048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACCCAAAGTTCTG	NA	False	NA	86	True	GGGGCT	-34	NA	1693162	1661382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
WTC11_00003170	chr1	-	6445	10	FSM	ENSG00000189339.12	ENST00000617444.5	6434	10	0	-11	0	11	multi-exon	FALSE	canonical	3	16	junction_8	65.3669603559232	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTTGTGGAACTCTGG	-1692466	True	NA	2	True	AATAAA	-25	NA	1692795	1661466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1690975_1691394_1692448
WTC11_00003171	chr1	-	2860	3	FSM	ENSG00000189339.12	ENST00000480991.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAATAGAAGACTGGG	NA	False	NA	NA	False	NA	NA	NA	1670139	1663781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1666020_1668326_1668473_1669663
WTC11_00003173	chr1	-	3181	13	NNC	ENSG00000008130.15	novel	3235	12	NA	NA	0	52610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	161.817348163498	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1774563	True	NA	NA	False	AATAAA	-20	NA	1778419	1698621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1699313_1751925_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
WTC11_00003174	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	60.8659122972653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-1724341	False	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
WTC11_00003188	chr1	-	3639	7	NNC	ENSG00000215790.8	novel	732	4	NA	NA	150	-2547	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	62.9481709203867	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	-1744432	True	NA	-13	True	AATAAA	-14	NA	1745769	1727384	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1729681_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
WTC11_00003190	chr1	-	3238	12	FSM	ENSG00000008130.15	ENST00000341426.9	3235	12	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_8	147.548675257516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAATAACAGCTTTCTT	-1774614	True	NA	NA	False	AATAAA	-23	NA	1778470	1751228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
WTC11_00003191	chr1	-	3101	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_8	178.077334857872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAATAACAGCTTTCTT	-1778646	False	NA	NA	False	AATAAA	-23	NA	1778790	1751228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
WTC11_00003192	chr1	-	1523	11	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-32	174	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	198.26056087886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCTTTCTGTAGCTG	-1777499	True	NA	NA	False	NA	NA	NA	1780101	1752800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1753061_1753566_1753650_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
WTC11_00003193	chr1	-	3304	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-83	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAATAACAGCTTTCTT	-1777550	True	NA	NA	False	AATAAA	-23	NA	1780152	1751228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
WTC11_00003203	chr1	-	3164	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	-1	0	0	multi-exon	FALSE	canonical	3	1595	junction_11	320.105457829496	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863093	True	NA	0	True	AATAAA	-20	NA	1891087	1785284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
WTC11_00003204	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_10	658.790717906681	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
WTC11_00003207	chr1	-	665	6	FSM	ENSG00000078369.18	ENST00000437146.1	423	6	-242	0	-242	0	multi-exon	FALSE	canonical	2	4	junction_5	994.226654239364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAACTATGTGGCCTGCG	-1832491	False	NA	NA	False	NA	NA	NA	1832527	1804525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1832231
WTC11_00003209	chr1	-	1524	3	ISM	ENSG00000178821.13	ENST00000602604.1	878	4	-37	-516	-27	7	intron_retention	FALSE	canonical	3	18	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGAAGGACTCTGGG	-1919293	False	NA	-1	True	AATAAA	-25	NA	1919306	1917582	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1918163_1918252_1918935_1919044
WTC11_00003210	chr1	-	943	5	FSM	ENSG00000178821.13	ENST00000310991.8	935	5	0	-8	0	7	multi-exon	FALSE	canonical	3	18	junction_3	25.7147817412476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGAAGGACTCTGGG	-1919266	False	NA	-1	True	AATAAA	-25	NA	1919279	1917582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044_1919089_1919181
WTC11_00003212	chr1	-	690	4	FSM	ENSG00000178821.13	ENST00000470931.2	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	27.5801861245835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGTCGGGCCCCAATA	-1919164	True	NA	NA	False	NA	NA	NA	1919270	1917936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1918163_1918252_1918432_1918892_1919089_1919181
WTC11_00003216	chr1	-	4474	2	FSM	ENSG00000162585.17	ENST00000497675.2	4478	2	0	4	0	0	multi-exon	FALSE	canonical	3	1183	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2194052	False	12903	-5	True	ATTAAA	-40	NA	2194108	2189547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2193911_2193997
WTC11_00003217	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	610.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181847	True	NA	-5	True	ATTAAA	-40	NA	2194750	2189547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2194687
WTC11_00003218	chr1	-	676	4	NNC	ENSG00000162585.17	novel	727	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_2	540.304235284776	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181848	True	NA	-5	True	ATTAAA	-40	NA	2194751	2189547	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_2189782_2193638_2193911_2194027_2194134_2194687
WTC11_00003219	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_3	132.290085292386	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181869	True	NA	-5	True	ATTAAA	-40	NA	2194772	2189547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
WTC11_00003220	chr1	-	701	3	FSM	ENSG00000162585.17	ENST00000476803.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_2	92	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGTTGTGATGAA	-2194157	False	NA	-26	True	ATTAAA	-19	NA	2194213	2189568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2193997
WTC11_00003221	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	460.068352409605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-2181845	True	NA	NA	False	NA	NA	NA	2194748	2191900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
WTC11_00003222	chr1	-	2539	1	FSM	ENSG00000269896.2	ENST00000602865.1	2407	1	-137	5	-137	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAATCCTTTCTCTTTCTG	NA	False	NA	-18	True	AATAAA	-13	NA	2352957	2350418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2350400_2353000
WTC11_00003223	chr1	-	1458	11	FSM	ENSG00000116151.14	ENST00000378529.7	1500	11	42	0	6	0	multi-exon	FALSE	canonical	3	3	junction_1	10.9676797910953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCCTTCTACTTGGA	-2391387	True	NA	NA	False	CATAAA	-14	NA	2391665	2355174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2355465_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
WTC11_00003229	chr1	-	1913	16	FSM	ENSG00000157881.16	ENST00000505228.5	1913	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	42.3001970050574	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACCACAGGGAAACTGC	NA	False	NA	NA	False	NA	NA	NA	2520901	2508794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510749_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722
WTC11_00003232	chr1	-	651	2	FSM	ENSG00000157881.16	ENST00000487804.1	718	2	0	67	0	-67	multi-exon	FALSE	canonical	3	204	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGCCGTCTCCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	2514085	2512472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2513040_2514001
WTC11_00003235	chr1	-	1156	3	FSM	ENSG00000162591.16	ENST00000494257.1	1174	3	18	0	18	0	multi-exon	FALSE	canonical	3	69	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCCTGGCCTGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	3493468	3490311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3490590_3490911_3490960_3492638
WTC11_00003238	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.090995481007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	-3646678	True	NA	1	True	AATAAA	-23	NA	3650058	3630766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
WTC11_00003240	chr1	-	1695	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	-3	0	0	multi-exon	FALSE	canonical	3	210	junction_1	34.5160161649752	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	-3646723	True	NA	1	True	AATAAA	-23	NA	3650103	3630766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
WTC11_00003241	chr1	-	1476	11	NIC	ENSG00000116213.16	novel	1692	12	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	81.8511453798907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACTTCTCTTCTTGAA	-3646645	True	NA	-5	True	AATAAA	-17	NA	3650025	3630772	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
WTC11_00003242	chr1	-	1931	10	NIC	ENSG00000116213.16	novel	1998	11	NA	NA	19	-3	intron_retention	FALSE	canonical	2	17	junction_5	86.3409835020355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACTTCTCTTCTTGAA	-3646704	True	NA	-5	True	AATAAA	-17	NA	3650084	3630772	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
WTC11_00003251	chr1	-	6358	4	FSM	ENSG00000227372.12	ENST00000452079.5	6358	4	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_2	48.5615302705982	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGAGTGGATGTTTGTG	-3741524	True	NA	-3	True	ATTAAA	-17	NA	3747322	3735983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3740388_3742803_3742912_3743060_3743191_3745606
WTC11_00003254	chr1	-	3531	5	FSM	ENSG00000227372.12	ENST00000423764.6	3525	5	0	-6	0	0	multi-exon	FALSE	canonical	3	107	junction_1	50.2070712151187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	-3741575	True	NA	-10	True	TTTAAA	-25	NA	3747373	3737142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
WTC11_00003259	chr1	-	4304	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	-1	0	1	multi-exon	FALSE	canonical	3	536	junction_1	7.38052994182818	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAGATCCTTTCCCAC	-3788814	True	NA	72	True	AATAAA	-18	NA	3796498	3778557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
WTC11_00003262	chr1	-	6429	22	FSM	ENSG00000116198.14	ENST00000378230.8	6431	22	0	2	0	-2	multi-exon	FALSE	canonical	3	66	junction_15	10.6792018182036	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGTCACTTTATTT	-3853969	True	NA	NA	False	AATAAA	-11	NA	3857211	3812087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00003263	chr1	-	6435	22	FSM	ENSG00000116198.14	ENST00000674985.1	6435	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	20.5377811244238	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-3853969	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837287_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00003265	chr1	-	5326	22	FSM	ENSG00000116198.14	ENST00000675375.1	5326	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	18.7061050822168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	-3853983	True	NA	NA	False	AATATA	-4	NA	3857225	3813030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837346_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00003268	chr1	-	2312	12	FSM	ENSG00000116198.14	ENST00000494653.5	2174	12	0	-138	0	138	multi-exon	FALSE	canonical	3	66	junction_5	12.265654527653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATTCTTTCACCAAA	-3853956	True	NA	NA	False	AATAAA	-25	NA	3857198	3833532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00003269	chr1	-	3499	3	FSM	ENSG00000198912.12	ENST00000474140.1	3499	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTCGTATGTTCGTAAAA	-3896658	True	NA	-15	True	AATAAA	-25	NA	3900293	3889124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3892997_3900171
WTC11_00003270	chr1	-	1653	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	-8	0	0	multi-exon	FALSE	canonical	3	264	junction_2	18.0616229121921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTCGTATGTTCGTAAAA	-3896637	True	NA	-15	True	AATAAA	-25	NA	3900272	3889124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
WTC11_00003274	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	6384	junction_2	127	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	-6124092	True	NA	NA	False	NA	NA	NA	6199563	6186574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651
WTC11_00003275	chr1	-	681	3	NIC	ENSG00000116251.11	novel	786	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	3317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-6199956	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6186817_6192929_6193055_6200488
WTC11_00003276	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	2976.84053243629	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-6199956	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
WTC11_00003277	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3071.06597490549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	-6199502	False	NA	NA	False	NA	NA	NA	6199553	6186722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
WTC11_00003278	chr1	-	357	4	NNC	ENSG00000116251.11	novel	2061	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2760.36547499703	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	-6124124	True	NA	NA	False	NA	NA	NA	6199595	6186722	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6186817_6192929_6193055_6197652_6197757_6199561
WTC11_00003280	chr1	-	4795	5	FSM	ENSG00000116237.16	ENST00000343813.10	4795	5	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	38.2034029897861	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-6226712	True	NA	-4	True	AATAAA	-22	NA	6235964	6221192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
WTC11_00003283	chr1	-	3614	6	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.135890929289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-6226775	True	NA	-4	True	AATAAA	-22	NA	6236027	6221192	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6222158_6223401_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
WTC11_00003287	chr1	-	446	3	ISM	ENSG00000116237.16	ENST00000474756.1	1227	4	212	7208	204	-7208	5prime_fragment	FALSE	canonical	3	72	junction_1	184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAATTAGTGGTTTTC	-6235746	False	NA	NA	False	CATAAA	-16	NA	6235760	6231806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_6232120_6234885_6234975_6235716
WTC11_00003290	chr1	-	1619	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	-5	0	1	multi-exon	FALSE	canonical	3	58	junction_8	256.698236018481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGGGTGGTCATTT	-6385801	False	6027	-2	True	AATAAA	-22	NA	6385813	6264267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
WTC11_00003291	chr1	-	1810	9	FSM	ENSG00000097021.20	ENST00000361521.9	1806	9	0	-4	0	1	multi-exon	FALSE	canonical	3	749	junction_8	43.8463225367875	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGGGTGGTCATTT	-6393512	True	NA	-2	True	AATAAA	-22	NA	6393767	6264267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
WTC11_00003293	chr1	-	1591	4	FSM	ENSG00000215788.11	ENST00000473343.5	1591	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	24.0416305603426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-6462849	False	NA	NA	False	ATTAAA	-31	NA	6463622	6461150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862
WTC11_00003302	chr1	-	3695	21	FSM	ENSG00000171680.23	ENST00000535355.6	3695	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_20	25.6633980602725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6485273	True	NA	-12	True	TATAAA	-18	NA	6485469	6467121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
WTC11_00003303	chr1	-	3665	21	FSM	ENSG00000171680.23	ENST00000400913.6	3668	21	3	0	1	0	multi-exon	FALSE	canonical	3	8	junction_20	25.4468072653526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6485779	True	NA	-12	True	TATAAA	-18	NA	6485951	6467121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485835
WTC11_00003304	chr1	-	3749	21	FSM	ENSG00000171680.23	ENST00000377732.5	3753	21	0	4	0	2	multi-exon	FALSE	canonical	3	21	junction_20	24.1836204899101	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGGAAGAGTCCTTT	-6496205	False	NA	-16	True	TATAAA	-14	NA	6496696	6467125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492
WTC11_00003305	chr1	-	3731	22	FSM	ENSG00000171680.23	ENST00000400915.8	3731	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_21	25.9843839376034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6496933	True	NA	-12	True	TATAAA	-18	NA	6497424	6467121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492_6496570_6497319
WTC11_00003308	chr1	-	6627	12	FSM	ENSG00000162408.11	ENST00000377705.6	6627	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	11.0146408951716	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGTGTAATTTTATG	-6546894	True	NA	-10	True	ATTAAA	-19	NA	6554513	6521346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
WTC11_00003313	chr1	-	4497	4	FSM	ENSG00000162413.17	ENST00000377658.8	4487	4	0	-10	0	10	multi-exon	FALSE	canonical	3	33	junction_3	9.97775303139718	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTGTCCTCCTGCTA	-6602044	True	NA	1	True	AATAAA	-26	NA	6602869	6590713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6593659_6595484_6595558_6599046_6599453_6601796
WTC11_00003314	chr1	-	6458	3	FSM	ENSG00000162413.17	ENST00000377663.3	6445	3	-13	0	-13	0	multi-exon	FALSE	canonical	3	33	junction_2	12	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCATTGCCTTTGT	-6602998	False	NA	-9	True	AATAAA	-16	NA	6603014	6590723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6595558_6599046_6599453_6601796
WTC11_00003315	chr1	-	3371	7	ISM	ENSG00000007923.17	ENST00000685360.1	4233	8	1844	-320	0	302	3prime_fragment	FALSE	canonical	3	774	junction_5	86.6326856459052	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTCGGCTCACTGCAAC	-6645089	False	NA	NA	False	NA	NA	NA	6645112	6633865	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6638365_6639901_6640058_6644557_6644675_6645040
WTC11_00003316	chr1	-	3203	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	-2	0	0	multi-exon	FALSE	canonical	3	681	junction_10	100.823850793792	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCGCTCTTCCGTGTA	-6679110	True	NA	-14	True	AATAAA	-18	NA	6701816	6634167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
WTC11_00003317	chr1	-	2157	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	53	0	-48	0	multi-exon	FALSE	canonical	3	24	junction_5	236.684798577245	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	-6679165	True	NA	NA	False	TATAAA	-24	NA	6701871	6635112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
WTC11_00003326	chr1	-	787	4	FSM	ENSG00000116285.13	ENST00000487559.1	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	181.799034345315	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTCTGATTTCAAATAT	-8021739	True	NA	NA	False	NA	NA	NA	8026296	8014039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8014397_8015307_8015401_8015494_8015693_8026157
WTC11_00003327	chr1	-	288	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATG	NA	False	NA	NA	False	NA	NA	NA	8088812	8088524	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_8088500_8088800
WTC11_00003329	chr1	-	8013	23	FSM	ENSG00000142599.19	ENST00000400908.7	8009	23	0	-4	0	-3	multi-exon	TRUE	canonical	3	37	junction_22	20.4723659745287	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTCCCGTGCACTG	-8814816	True	NA	-1	True	AATAAA	-22	NA	8817640	8352399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8614560_8614687_8624309_8624381_8655972_8656442_8817159
WTC11_00003335	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1512.45105651294	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	-8636993	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
WTC11_00003336	chr1	-	2548	9	FSM	ENSG00000074800.16	ENST00000464920.2	2548	9	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1755.45962642266	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	-8871553	False	NA	-26	True	AATAAA	-23	NA	8871576	8861001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451
WTC11_00003337	chr1	-	1831	10	FSM	ENSG00000074800.16	ENST00000645609.1	1819	10	0	-12	0	12	multi-exon	FALSE	canonical	3	14937	junction_6	1373.0115318768	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGGGGCATGAGCGCCC	-8879069	False	NA	NA	False	NA	NA	NA	8879092	8863101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
WTC11_00003346	chr1	-	960	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	0	18	0	multi-exon	FALSE	canonical	3	7	junction_1	35	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	-9686019	True	NA	2	True	AATAAA	-33	NA	9687555	9672404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9672720_9680711_9681136_9687334
WTC11_00003348	chr1	-	3836	14	FSM	ENSG00000171603.18	ENST00000435891.5	3829	14	0	-7	0	6	multi-exon	FALSE	canonical	3	319	junction_8	87.2260207634445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGAGCGGGGTTTGTCTT	-9751514	False	NA	-12	True	AATAAA	-23	NA	9751581	9729020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472
WTC11_00003350	chr1	-	4571	17	NIC	ENSG00000171603.18	novel	4647	18	NA	NA	-9	-9	combination_of_known_junctions	FALSE	canonical	3	319	junction_8	94.2594284077195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAACTAACTCCAGCCG	-9815486	True	NA	-28	True	AATAAA	-7	NA	9823974	9729036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
WTC11_00003352	chr1	-	1206	5	FSM	ENSG00000178585.15	ENST00000400904.7	1206	5	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_4	22.6550215184184	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	-9905818	True	NA	-19	True	NA	NA	NA	9910336	9850108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
WTC11_00003353	chr1	-	655	5	FSM	ENSG00000162441.12	ENST00000488540.5	652	5	0	-3	0	3	multi-exon	FALSE	canonical	3	21	junction_1	54.4397602860262	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCGGGTGTGGTGGCTT	-9933449	False	NA	0	True	AATAAA	-26	NA	9935620	9922109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491
WTC11_00003354	chr1	-	4988	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	1	0	-1	multi-exon	FALSE	canonical	3	85	junction_7	24.4682217897219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCCACGTTTTTCT	-9941220	True	NA	-2	True	AATAAA	-34	NA	9943391	9926293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
WTC11_00003355	chr1	-	1462	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	16	-533	0	0	multi-exon	FALSE	canonical	3	42	junction_7	38.4447655734822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	-9941220	True	NA	-22	True	AATAAA	-17	NA	9943391	9929719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
WTC11_00003356	chr1	-	819	7	NNC	ENSG00000162441.12	novel	1405	7	NA	NA	1498	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	52.8974374510608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTTATGGCTTGTGTT	-9939099	False	NA	-36	True	CATAAA	-2	NA	9941270	9930264	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9941166
WTC11_00003357	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	118.404391810439	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	-10459169	True	NA	0	True	AATAAA	-33	NA	10472529	10456521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
WTC11_00003358	chr1	-	744	5	FSM	ENSG00000160049.12	ENST00000476658.5	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	243.858052973446	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGACTGTTCAGGAGGC	-10459119	True	NA	NA	False	CATAAA	-5	NA	10472479	10461642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10461703_10462987_10463210_10467189_10467333_10469176_10469339_10472322
WTC11_00003359	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	48.9846914862184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	-10459128	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
WTC11_00003360	chr1	-	1103	4	ISM	ENSG00000160049.12	ENST00000476658.5	744	5	-7	933	2	-108	5prime_fragment	FALSE	canonical	2	12	junction_1	227.691799491232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCCTATTGTAGATAGA	-10459126	True	NA	-117	True	NA	NA	NA	10472486	10462575	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_10463210_10467189_10467333_10469176_10469339_10472322
WTC11_00003362	chr1	-	432	2	FSM	ENSG00000130940.15	ENST00000490176.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCTGACACCTTTT	NA	False	NA	NA	False	AATATA	-2	NA	10651100	10650483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10650756_10650940
WTC11_00003363	chr1	-	3279	9	FSM	ENSG00000130940.15	ENST00000496432.6	3279	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	7.0433922934904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGGCCTGCGTCCAG	-10694328	False	NA	NA	False	NA	NA	NA	10694479	10652983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10694296
WTC11_00003364	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2586	junction_1	81.3330266527061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	-11040429	True	NA	-7	True	NA	NA	NA	11060018	11054588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
WTC11_00003365	chr1	-	461	2	FSM	ENSG00000116649.10	ENST00000490101.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGCTGTGTACAGCGC	-11036231	False	NA	-24	True	NA	NA	NA	11055820	11054663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11055085_11055780
WTC11_00003367	chr1	-	731	5	FSM	ENSG00000116649.10	ENST00000459997.1	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	1174.86382189597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCACAGGCCTGGAGC	-11040431	True	NA	NA	False	NA	NA	NA	11060020	11056010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11056095_11056603_11056758_11058799_11058893_11059224_11059381_11059776
WTC11_00003369	chr1	-	2801	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	-5	0	5	multi-exon	FALSE	canonical	3	554	junction_10	47.9402840347586	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTTTTATTTTGTT	-11089838	True	NA	NA	False	ATTAAA	-22	NA	11099869	11066612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
WTC11_00003377	chr1	-	4016	20	FSM	ENSG00000198793.13	ENST00000376838.5	4017	20	0	1	0	-1	multi-exon	TRUE	canonical	3	244	junction_15	26.2242618839376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATGAGTGGCGTTTT	-11131534	False	NA	-9	True	AATAAA	-22	NA	11131558	11106535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528
WTC11_00003378	chr1	-	8718	58	FSM	ENSG00000198793.13	ENST00000361445.9	8721	58	1	2	1	-2	multi-exon	TRUE	canonical	3	151	junction_39	46.0034925808888	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATATGAGTGGCGTTT	-11254220	True	NA	-10	True	AATAAA	-21	NA	11262550	11106536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259424_11262444
WTC11_00003379	chr1	-	2086	5	FSM	ENSG00000198793.13	ENST00000495435.1	2356	5	270	0	270	0	multi-exon	FALSE	canonical	3	224	junction_2	6.05702071979286	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGGTGTTGGGACCAGG	-11144745	False	NA	NA	False	NA	NA	NA	11144755	11131593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647
WTC11_00003380	chr1	-	1332	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	0	3390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.310205417024	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAATAAAATTGA	-11653066	True	NA	NA	False	AAAAAG	-4	NA	11654429	11644996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11645026_11648370_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
WTC11_00003381	chr1	-	1684	6	FSM	ENSG00000116661.11	ENST00000354287.5	1287	6	-358	-39	-358	39	multi-exon	FALSE	canonical	3	335	junction_5	22.8350607619073	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTTCTGTCTCCTGAG	NA	False	NA	2	True	GATAAA	-16	NA	11654787	11648347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
WTC11_00003382	chr1	-	1114	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	-61	0	61	multi-exon	FALSE	canonical	3	1115	junction_8	742.205149790137	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTTCTCCACCAAAATG	-11669716	True	NA	41	True	NA	NA	NA	11681148	11674418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
WTC11_00003385	chr1	-	1042	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	-40	0	-5	multi-exon	FALSE	canonical	3	418	junction_4	1140.69657994578	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCTGAGCCATCATTA	-11691465	False	NA	-25	True	AATAAA	-18	NA	11691477	11674484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
WTC11_00003387	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_8	758.718450744411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	-11691597	False	NA	NA	False	CATAAA	-37	NA	11691609	11674747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
WTC11_00003392	chr1	-	281	1	NIC	ENSG00000116670.15	novel	1860	11	NA	NA	-797	-4793	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCGGTGGGGGCGGAGCA	-11674666	False	NA	NA	False	NA	NA	NA	11681945	11681664	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_11681700_11681900
WTC11_00003394	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_11	8.42958191369355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-11805117	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
WTC11_00003398	chr1	-	5138	2	FSM	ENSG00000116685.16	ENST00000376576.3	2539	2	-15	-2584	-15	0	multi-exon	FALSE	canonical	3	520	junction_1	0	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-11925310	True	NA	-5	True	AATAAA	-18	NA	11926443	11919590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11923490_11925204
WTC11_00003399	chr1	-	1260	6	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	207	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	169.064011545923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	12596101	12567909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12595985
WTC11_00003401	chr1	-	539	4	FSM	ENSG00000162496.9	ENST00000464917.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	187.419315973568	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTCTCAGGAACCTACA	-12616769	False	129	NA	False	NA	NA	NA	12616795	12568391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_12568425_12572727_12572854_12580522_12580667_12616559
WTC11_00003403	chr1	-	1036	2	FSM	ENSG00000162496.9	ENST00000482265.1	1036	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGGTGGCTCACACCTG	-12616670	False	NA	NA	False	AAAAAG	-13	NA	12616696	12579767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_12580667_12616559
WTC11_00003404	chr1	-	1898	2	FSM	ENSG00000162494.6	ENST00000376085.4	2168	2	233	37	233	-37	multi-exon	FALSE	canonical	1	1	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAGAAATAAATAAATGT	-13513746	True	NA	NA	False	NA	NA	NA	13513770	13475009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_13476100_13512962
WTC11_00003405	chr1	-	4357	8	FSM	ENSG00000132906.18	ENST00000546424.5	4463	8	106	0	8	0	multi-exon	FALSE	canonical	3	94	junction_4	20.2796771700747	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCATATTCTAGGCTCAC	-15522050	True	NA	NA	False	NA	NA	NA	15524339	15490831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
WTC11_00003406	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	21.540659228538	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	-15521926	True	NA	-10	True	AATAAA	-14	NA	15524215	15491400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
WTC11_00003413	chr1	-	2762	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	14	-6	14	4	multi-exon	FALSE	canonical	3	6	junction_2	18.4	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATAGGTCCCTGTGGGG	-15974757	True	NA	4	True	AATAAA	-21	NA	15976118	15941864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
WTC11_00003419	chr1	-	1708	7	FSM	ENSG00000185519.9	ENST00000375662.5	1720	7	12	0	-7	0	multi-exon	FALSE	canonical	2	9	junction_1	4.11298755975102	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTTGGCCTGGTCTCTG	-16073521	True	NA	0	True	ATTAAA	-20	NA	16073639	16057768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16058718_16059493_16059605_16059868_16060052_16062098_16062193_16062498_16062535_16063520_16063637_16073420
WTC11_00003420	chr1	-	3996	17	FSM	ENSG00000142627.13	ENST00000358432.8	3946	17	-50	0	-50	0	multi-exon	FALSE	canonical	3	49	junction_16	15.4584877575395	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	-16154028	True	NA	1	True	AATAAA	-22	NA	16156119	16124336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
WTC11_00003421	chr1	-	3322	16	FSM	ENSG00000142632.17	ENST00000270747.8	3322	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	35.4755627940637	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTGTGGCTTCTA	-16209166	True	NA	0	True	ATTAAA	-21	NA	16212652	16197853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16209084_16212501
WTC11_00003429	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	17.2240142436851	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-16349851	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
WTC11_00003430	chr1	-	1153	3	FSM	ENSG00000037637.11	ENST00000456164.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	14.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTCTCCAGGCTCTC	NA	False	NA	NA	False	NA	NA	NA	16253427	16251081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16251786_16252287_16252405_16253095
WTC11_00003433	chr1	-	1869	2	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	48572	108	38134	-108	3prime_fragment	FALSE	canonical	3	45	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16564915	16562426	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16564187_16564806
WTC11_00003435	chr1	-	488	4	FSM	ENSG00000219481.11	ENST00000420513.1	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	10.8423039781937	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGACAGTGTGGAGTGC	-16605890	False	NA	NA	False	NA	NA	NA	16608650	16593561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16593754_16594591_16594662_16594930_16595014_16608507
WTC11_00003436	chr1	-	4251	3	NNC	ENSG00000219481.11	novel	2752	3	NA	NA	0	46	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	60	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	-16610774	True	NA	NA	False	AATAAA	-28	NA	16613534	16599542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16603325_16608507_16608780_16613337
WTC11_00003439	chr1	-	2755	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTCTGGACATAGGT	-16610774	True	NA	-3	True	AATAAA	-25	NA	16613534	16605405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16607692_16608507_16608780_16613337
WTC11_00003440	chr1	-	3117	14	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	46	267	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_13	30.0209000176514	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGATTTTCTGTTCCAC	-16642243	True	NA	NA	False	TTTAAA	-25	NA	16644626	16617985	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644510
WTC11_00003442	chr1	-	1751	6	FSM	ENSG00000215908.10	ENST00000640476.1	1750	6	2	-3	2	0	multi-exon	FALSE	canonical	3	21	junction_2	33.5952377577537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	-16628626	False	NA	-4	True	AATAAA	-26	NA	16628650	16618252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16619104_16619844_16620039_16625774_16626006_16626352_16626500_16627144_16627290_16628467
WTC11_00003443	chr1	-	2178	7	FSM	ENSG00000215908.10	ENST00000639594.1	2175	7	0	-3	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.2283995146331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	-16631085	False	NA	-4	True	AATAAA	-26	NA	16631109	16618252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16619104_16619844_16620246_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889
WTC11_00003445	chr1	-	1924	1	FSM	ENSG00000236698.1	ENST00000419267.1	435	1	-181	-1308	-181	1308	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGACACTTTTATTTT	-16686226	True	NA	NA	False	ATTAAA	-20	NA	16686236	16684312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16684300_16686200
WTC11_00003446	chr1	-	531	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	-16889470	False	NA	0	True	AATAAA	-31	NA	16889501	16888537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888783_16889215
WTC11_00003447	chr1	-	1309	2	FSM	ENSG00000238142.3	ENST00000654227.2	1654	2	142	203	0	-19	multi-exon	FALSE	canonical	3	83	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACTAAAAAACTAAAAAT	-16889487	False	NA	NA	False	ATTAAA	-2	NA	16889518	16887779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888786_16889215
WTC11_00003448	chr1	-	970	8	FSM	ENSG00000117122.14	ENST00000375534.7	970	8	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_7	1168.7586647065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16978266	False	16223	NA	False	ATTAAA	-18	NA	16978276	16974501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977196_16978236
WTC11_00003450	chr1	-	2371	6	FSM	ENSG00000117122.14	ENST00000490075.5	2371	6	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_5	363.467192467216	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964398	True	NA	NA	False	ATTAAA	-18	NA	16980621	16974501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16978315_16980586
WTC11_00003454	chr1	-	1225	7	FSM	ENSG00000159363.19	ENST00000502418.1	1201	7	0	-24	0	1	multi-exon	FALSE	canonical	3	32	junction_1	168.714502439279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCCTGTCTTGTAC	NA	False	NA	-1	True	AATAAA	-21	NA	16990003	16985956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886
WTC11_00003456	chr1	-	3997	29	FSM	ENSG00000159363.19	ENST00000326735.13	3996	29	0	-1	0	1	multi-exon	FALSE	canonical	3	153	junction_24	66.1673820623091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCCTGTCTTGTAC	-17005360	True	NA	-1	True	AATAAA	-21	NA	17011928	16985956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
WTC11_00003457	chr1	-	3982	29	FSM	ENSG00000159363.19	ENST00000452699.5	3981	29	0	-1	0	1	multi-exon	FALSE	canonical	3	148	junction_24	66.8855537161678	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCCTGTCTTGTAC	-17005360	True	NA	-1	True	AATAAA	-21	NA	17011928	16985956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
WTC11_00003458	chr1	-	4027	29	NIC	ENSG00000159363.19	novel	3996	29	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	67	junction_24	79.1300595635477	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCCTGTCTTGTAC	-17005393	True	NA	-1	True	AATAAA	-21	NA	17011961	16985956	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004409_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
WTC11_00003468	chr1	-	427	3	FSM	ENSG00000117118.10	ENST00000466613.2	828	3	0	401	0	-401	multi-exon	FALSE	canonical	3	993	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTTTCTTGGGTAAA	-17044068	True	NA	NA	False	AAAACA	-39	NA	17054031	17032930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17033146_17044760_17044889_17053947
WTC11_00003473	chr1	-	2964	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	-7	0	5	multi-exon	FALSE	canonical	3	12	junction_3	46.5659804207361	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGATGGTCTTTCTGG	-18899417	True	NA	0	True	AATAAA	-21	NA	18902528	18871424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
WTC11_00003474	chr1	-	3144	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	-5	0	5	multi-exon	FALSE	canonical	3	132	junction_4	21.6257593944757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGATGGTCTTTCTGG	-18899444	True	NA	0	True	AATAAA	-21	NA	18902555	18871424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
WTC11_00003476	chr1	-	824	8	NIC	ENSG00000159423.17	novel	844	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	63.3400282891748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGATGTAGTCTCTCT	-18899444	True	NA	-1	True	AATAAA	-17	NA	18902555	18882558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_18882673_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
WTC11_00003478	chr1	-	313	1	FSM	ENSG00000221662.1	ENST00000408735.1	78	1	42	-277	42	277	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCCAAGTAGATGGGA	-18897025	False	NA	NA	False	NA	NA	NA	18897106	18896793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18896800_18897100
WTC11_00003480	chr1	-	3479	21	FSM	ENSG00000127481.15	ENST00000375224.1	3475	21	0	-4	0	0	multi-exon	FALSE	canonical	3	272	junction_18	46.4466091334986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	-19104884	False	NA	-4	True	AATAAA	-26	NA	19104916	19074509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19074897_19076739_19076903_19077975_19078067_19081348_19081574_19084503_19084699_19086144_19086271_19086678_19086822_19087815_19087930_19088758_19088978_19092818_19092919_19093312_19093487_19093948_19094140_19094905_19095026_19095544_19095653_19096522_19096651_19097192_19097281_19099596_19099678_19100375_19100574_19101519_19101642_19104083_19104258_19104584
WTC11_00003487	chr1	-	6640	23	FSM	ENSG00000127463.16	ENST00000477853.6	6640	23	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_14	40.3538071570219	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGTTTTCTTTACTT	-19245647	True	NA	-2	True	AATAAA	-33	NA	19251524	19215659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238858_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
WTC11_00003488	chr1	-	6555	22	NIC	ENSG00000127463.16	novel	6640	23	NA	NA	-5	-29	combination_of_known_splicesites	FALSE	canonical	3	28	junction_13	71.1295965202516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAATTGCTTTTAA	-19245654	True	NA	-31	True	AATAAA	-4	NA	19251531	19215688	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
WTC11_00003489	chr1	-	3892	3	FSM	ENSG00000127463.16	ENST00000480380.1	3892	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	19221916	19216873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763
WTC11_00003490	chr1	-	6885	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	-263	-1214	-220	0	multi-exon	FALSE	canonical	3	49	junction_14	65.8121544201486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGTTTTCTTTACTT	NA	False	NA	-2	True	AATAAA	-33	NA	19251772	19215659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
WTC11_00003497	chr1	-	1381	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	-21	0	21	multi-exon	FALSE	canonical	3	263	junction_3	17.6792408082348	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTCCCATCCTACC	-19307085	True	NA	16	True	NA	NA	NA	19312144	19303943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
WTC11_00003498	chr1	-	1171	6	FSM	ENSG00000053371.13	ENST00000330072.9	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	113.930856224291	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGCCTAGGTCTTGA	-19307035	True	NA	-39	True	AATAAA	-16	NA	19312094	19303998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308454_19308643_19311826
WTC11_00003500	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_8	173.515444197339	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-19456823	True	NA	-17	True	AATAAA	-21	NA	19485539	19338774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
WTC11_00003501	chr1	-	1734	3	FSM	ENSG00000077549.19	ENST00000674299.1	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	2008	junction_2	22	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	NA	False	NA	-34	True	AAAACA	-26	NA	19346362	19339136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19344357_19344435_19345186
WTC11_00003502	chr1	-	2063	8	FSM	ENSG00000077549.19	ENST00000482808.2	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_7	176.016928684924	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	-19456821	True	NA	-34	True	AAAACA	-26	NA	19485537	19339136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19344357_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
WTC11_00003504	chr1	-	5957	8	FSM	ENSG00000077549.19	ENST00000375144.6	5943	8	0	-14	0	0	multi-exon	FALSE	canonical	3	1555	junction_7	169.069240736644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTGTCTGCCAGCC	-19456821	True	NA	-128	True	NA	NA	NA	19485537	19339230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
WTC11_00003510	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.27760839478607	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-19979488	True	NA	NA	False	NA	NA	NA	19979618	19975672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
WTC11_00003512	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	17.4547032821147	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-20505416	True	NA	-1	True	ATTAAA	-15	NA	20508151	20499447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
WTC11_00003513	chr1	-	2078	11	FSM	ENSG00000244038.11	ENST00000415136.6	2126	11	48	0	48	0	multi-exon	FALSE	canonical	3	3524	junction_4	190.042863586087	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTCCTGGTTTGCTAA	-20625717	True	NA	6	True	AATAAA	-44	NA	20661496	20651766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
WTC11_00003514	chr1	-	328	2	FSM	ENSG00000244038.11	ENST00000475210.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	3562	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCCACTCAGGTAAGCA	-20617305	False	NA	NA	False	TTTAAA	-36	NA	20653084	20652633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20652728_20652850
WTC11_00003515	chr1	-	766	2	FSM	ENSG00000244038.11	ENST00000477229.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATATGTCCAGCAGCC	-20625590	True	NA	NA	False	NA	NA	NA	20661369	20660398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20660992_20661196
WTC11_00003516	chr1	-	3932	15	FSM	ENSG00000117245.13	ENST00000400463.8	3958	15	28	-2	28	2	multi-exon	FALSE	canonical	3	23	junction_3	8.29463805166707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTCTGACCCTCTG	NA	False	NA	-8	True	AATAAA	-18	NA	20717979	20664011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20664763_20666213_20666332_20670420_20670489_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
WTC11_00003517	chr1	-	3935	15	FSM	ENSG00000117245.13	ENST00000247986.2	3969	15	38	-4	28	2	multi-exon	FALSE	canonical	3	13	junction_3	10.0318370751344	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTCTGACCCTCTG	NA	False	NA	-8	True	AATAAA	-18	NA	20717979	20664011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20664763_20666213_20666332_20670420_20670492_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
WTC11_00003519	chr1	-	3407	9	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	114	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	10.8965304110988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	-20731713	True	NA	-17	True	AATAAA	-14	NA	20732164	20719730	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20732003
WTC11_00003523	chr1	-	3794	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	3	0	intron_retention	FALSE	canonical	2	116	junction_11	90.8756302057337	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20784449	True	NA	-21	True	AATAAA	-19	NA	20787304	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
WTC11_00003524	chr1	-	4222	8	NIC	ENSG00000127483.19	novel	4822	9	NA	NA	519	0	intron_retention	FALSE	canonical	2	32	junction_6	133.377475686145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-20774472	False	NA	-24	True	AATAAA	-16	NA	20774486	20742681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20770929_20771074_20773450
WTC11_00003525	chr1	-	4825	9	FSM	ENSG00000127483.19	ENST00000375003.6	4822	9	0	-3	0	0	multi-exon	FALSE	canonical	2	289	junction_8	45.0997159081961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20774991	False	NA	-21	True	AATAAA	-19	NA	20775005	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450
WTC11_00003526	chr1	-	4358	13	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	92	junction_12	101.592698501855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-20781980	True	NA	-24	True	AATAAA	-16	NA	20786666	20742681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786185
WTC11_00003538	chr1	-	6225	34	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	88	junction_25	48.9953803035832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	-21168806	True	NA	-24	True	AATAAA	-32	NA	21176884	20806469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00003539	chr1	-	6769	35	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	0	4	intron_retention	FALSE	canonical	3	14	junction_31	77.5838033341521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGACTTCTCCTTTG	-21168758	True	NA	-29	True	AATAAA	-27	NA	21176836	20806474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001325_21002712_21002809_21050865_21050995_21089137_21089214_21176174
WTC11_00003544	chr1	-	815	1	FSM	ENSG00000233072.1	ENST00000420703.1	385	1	80	-510	80	510	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTGACAGAGCAAGACCC	NA	False	NA	NA	False	NA	NA	NA	21003854	21003039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21003000_21003900
WTC11_00003545	chr1	-	1342	2	FSM	ENSG00000075151.24	ENST00000634778.1	1343	2	0	1	0	-1	multi-exon	FALSE	canonical	3	167	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTGTGTTTTTATGTT	-21176808	False	8078	0	True	AATAAA	-18	NA	21176819	21175114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21176359_21176721
WTC11_00003546	chr1	-	5071	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	-4	0	1	multi-exon	TRUE	canonical	3	37	junction_18	32.994621709127	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGGGTGTCTGTCC	-21289701	True	NA	0	True	AATAAA	-19	NA	21290463	21217245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
WTC11_00003547	chr1	-	5100	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_18	18.2730490336904	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGGGTGTCTGTCC	-21342260	True	NA	0	True	AATAAA	-19	NA	21345504	21217245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
WTC11_00003548	chr1	-	2172	14	FSM	ENSG00000117298.16	ENST00000526194.5	2172	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	35.6805351937997	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCTCAGGACAGGGAGC	-21289701	True	NA	NA	False	NA	NA	NA	21290463	21233104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
WTC11_00003551	chr1	-	207	2	NNC	ENSG00000227001.3	novel	661	5	NA	NA	1579	-843	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTCAGCAATTGTGG	NA	False	NA	NA	False	NA	NA	NA	21426388	21425467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_21425520_21426233
WTC11_00003552	chr1	-	3324	23	FSM	ENSG00000076864.21	ENST00000374761.6	3318	23	0	-6	0	6	multi-exon	TRUE	canonical	3	32	junction_22	12.8575314777946	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGCCTGGCTTTGTGTG	-21622230	True	NA	0	True	AATAAA	-27	NA	21622568	21596214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21622338
WTC11_00003553	chr1	-	3407	25	FSM	ENSG00000076864.21	ENST00000495204.5	2489	25	-125	-793	-58	6	multi-exon	FALSE	canonical	3	20	junction_24	15.479769503739	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGCCTGGCTTTGTGTG	NA	False	NA	0	True	AATAAA	-27	NA	21651961	21596214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21651778
WTC11_00003554	chr1	-	4301	25	FSM	ENSG00000076864.21	ENST00000611549.4	4294	25	0	-7	0	6	multi-exon	FALSE	canonical	3	7	junction_7	22.1434323722006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGCCTGGCTTTGTGTG	-21668991	True	NA	0	True	AATAAA	-27	NA	21669300	21596214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598096_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21603913_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
WTC11_00003555	chr1	-	3328	25	FSM	ENSG00000076864.21	ENST00000374765.9	3322	25	0	-6	0	6	multi-exon	FALSE	canonical	3	12	junction_24	16.4430308607899	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGCCTGGCTTTGTGTG	-21669048	True	NA	0	True	AATAAA	-27	NA	21669357	21596214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
WTC11_00003556	chr1	-	4132	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	287	0	-287	multi-exon	FALSE	canonical	3	194	junction_21	30.6594435580612	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGACTGAAGTACATTTG	-21769724	True	NA	-3	True	AATAAA	-28	NA	21783149	21678584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00003557	chr1	-	4022	26	FSM	ENSG00000090686.16	ENST00000400301.5	4309	26	0	287	0	-287	multi-exon	FALSE	canonical	3	8	junction_4	57.3901176161889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGACTGAAGTACATTTG	-21783134	False	NA	-3	True	AATAAA	-28	NA	21783195	21678584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00003558	chr1	-	3808	27	NIC	ENSG00000090686.16	novel	4419	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_18	58.3514271741012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	-21769724	True	NA	-24	True	AATAAA	-21	NA	21783149	21678902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721164_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00003559	chr1	-	3796	27	NIC	ENSG00000090686.16	novel	4419	27	NA	NA	15	0	intron_retention	FALSE	canonical	3	97	junction_14	42.612069435061	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	-21769709	True	NA	-24	True	AATAAA	-21	NA	21783134	21678902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721164_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00003561	chr1	-	2764	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	54	0	54	0	multi-exon	FALSE	canonical	3	194	junction_5	28.1291663580704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	-21783491	False	NA	-5	True	AATAAA	-14	NA	21783552	21727850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00003564	chr1	-	3564	11	FSM	ENSG00000142798.20	ENST00000486901.1	3586	11	23	-1	23	0	multi-exon	TRUE	canonical	3	177	junction_10	26.4327448442268	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTCCTGAGTCTTTGA	-21830676	False	NA	-11	True	AATAAA	-18	NA	21830690	21822243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21823489_21823615_21823720_21824120_21824205_21824305_21824377_21824536_21824616_21824703_21824780_21827862_21827920_21828029_21828153_21828254_21828427_21828834_21829080_21829382
WTC11_00003571	chr1	-	3319	2	FSM	ENSG00000179546.5	ENST00000374619.2	3319	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	-23217007	True	NA	NA	False	AATAAA	-22	NA	23217502	23191894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23195002_23217290
WTC11_00003573	chr1	-	2518	11	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	470.567370309502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAATTAGCCCATGTTG	-23319121	True	NA	NA	False	NA	NA	NA	23344284	23256017	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256050_23309786_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
WTC11_00003574	chr1	-	2693	12	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	532.844417774756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAATTAGCCCATGTTG	-23319121	True	NA	NA	False	NA	NA	NA	23344284	23256017	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256051_23309781_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
WTC11_00003576	chr1	-	5275	2	FSM	ENSG00000261326.4	ENST00000655082.1	5301	2	26	0	-23	0	multi-exon	FALSE	canonical	3	24	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTTTTGTCTTATTT	NA	False	NA	-1	True	AATAAA	-17	NA	23287462	23281306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23283114_23283994
WTC11_00003577	chr1	-	7784	11	FSM	ENSG00000125944.21	ENST00000302271.11	7751	11	-33	0	0	0	multi-exon	FALSE	canonical	3	450	junction_10	355.90084293241	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	-23319154	True	NA	0	True	AATAAA	-18	NA	23344317	23304687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
WTC11_00003578	chr1	-	2520	10	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	975	junction_9	187.03224783014	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-23319154	True	NA	-17	True	AATAAA	-23	NA	23344317	23309785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
WTC11_00003579	chr1	-	3872	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	-1178	0	1175	multi-exon	FALSE	canonical	3	325	junction_10	387.929323459828	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATGATAGTTTTGAGT	-23319159	True	NA	NA	False	GATAAA	-14	NA	23344322	23308607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
WTC11_00003592	chr1	-	5205	7	FSM	ENSG00000007968.7	ENST00000361729.3	5196	7	1	-10	1	10	multi-exon	FALSE	canonical	2	6	junction_5	5.93483127158829	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTTTGTCGTGCTTT	-23530725	True	NA	-7	True	ATTAAA	-23	NA	23531232	23506427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23510149_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
WTC11_00003595	chr1	-	1537	13	NNC	ENSG00000117308.15	novel	1516	12	NA	NA	0	28304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.044561680964	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGCGGTGGCTCACG	-23797063	True	NA	NA	False	NA	NA	NA	23800752	23767294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23767323_23795603_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
WTC11_00003597	chr1	-	1385	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	91.1469143745415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCAGGTTCTCACAGA	-23797065	True	NA	-13	True	AATAAA	-17	NA	23800754	23795603	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
WTC11_00003598	chr1	-	1511	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_10	86.9120387480287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCAGGTTCTCACAGA	-23797065	True	NA	-13	True	AATAAA	-17	NA	23800754	23795603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
WTC11_00003599	chr1	-	1796	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_8	95.2502875793591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCAGGTTCTCACAGA	-23797092	True	NA	-13	True	AATAAA	-17	NA	23800781	23795603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
WTC11_00003600	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	91.0881441242492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	-23797064	True	NA	-70	True	NA	NA	NA	23800753	23795660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
WTC11_00003609	chr1	-	1364	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	-10	0	8	multi-exon	FALSE	canonical	3	43	junction_3	93.7504074065222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTGTGCAGCTGTGTG	-23824021	True	NA	0	True	ATTAAA	-29	NA	23825428	23801876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
WTC11_00003610	chr1	-	1589	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	-14	-5	-14	5	multi-exon	FALSE	canonical	3	223	junction_3	31.9491783931919	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCGGTTGTGCAGCTGT	-23824036	True	NA	-3	True	ATTAAA	-26	NA	23825443	23801879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
WTC11_00003612	chr1	-	2054	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	-11	0	11	multi-exon	FALSE	canonical	3	71	junction_3	13.2711133285641	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCCTAGTTTCAAC	-23867362	True	NA	23	True	AAAACA	-10	NA	23868290	23845065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
WTC11_00003613	chr1	-	3540	6	NNC	ENSG00000188529.15	novel	3487	6	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	596.572543786588	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATTTGTGTAAGAGG	-23943684	True	NA	39	True	NA	NA	NA	23980331	23964747	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
WTC11_00003614	chr1	-	7221	6	NNC	ENSG00000188529.15	novel	7656	6	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	567.524237367885	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCTTAGATTTGTAA	-23943684	True	NA	1	True	AATAAA	-42	NA	23980331	23964785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973_23975076_23978710_23978818_23980190
WTC11_00003615	chr1	-	3574	6	NNC	ENSG00000188529.15	novel	3487	6	NA	NA	-49	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	555.2466118762	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTGCTCTTAGATT	-23943758	True	NA	-4	True	AATAAA	-37	NA	23980405	23964790	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23967724_23971572_23971627_23971849_23972013_23974973_23975076_23978710_23978818_23980190
WTC11_00003616	chr1	-	5460	6	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	-110	-10	intron_retention	FALSE	canonical	3	94	junction_1	627.490430205912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAAAATGTTTTGGAT	-23980451	False	NA	-12	True	AATAAA	-13	NA	23980466	23966454	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23967957_23971572_23971627_23971849_23972013_23974973_23978274_23978652_23978818_23980190
WTC11_00003617	chr1	-	2395	7	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	-110	-12	combination_of_known_junctions	FALSE	canonical	3	58	junction_4	581.678820312378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATCACAAAATGTTTTGG	-23980451	False	NA	-14	True	AATAAA	-11	NA	23980466	23966456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23967724_23971572_23971627_23971849_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
WTC11_00003618	chr1	-	3957	4	FSM	ENSG00000188529.15	ENST00000485841.5	3957	4	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	329.730192733392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCGGA	-23977637	False	NA	NA	False	NA	NA	NA	23977652	23970378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973
WTC11_00003620	chr1	-	7158	6	NNC	ENSG00000188529.15	novel	2917	6	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	601.9014537281	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCTTAGATTTGTAA	-23943624	True	NA	1	True	AATAAA	-42	NA	23980271	23964785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
WTC11_00003625	chr1	-	4578	7	FSM	ENSG00000185436.12	ENST00000327535.6	4566	7	0	-12	0	12	multi-exon	FALSE	canonical	3	28	junction_1	19.6277864263905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAGCGTATGCTCTTA	-24186093	True	NA	NA	False	AATAAA	-36	NA	24187289	24154155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24157892_24159051_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
WTC11_00003626	chr1	-	1476	6	FSM	ENSG00000185436.12	ENST00000327575.6	1476	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.7371327074327	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTGCCTTTGCAAGG	-24186065	True	NA	NA	False	NA	NA	NA	24187261	24157098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24157892_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
WTC11_00003628	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-24186052	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
WTC11_00003629	chr1	-	2932	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	-388	0	382	multi-exon	FALSE	canonical	3	34	junction_6	17.7913072101208	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTGGCTGGTAAGTC	-24412794	True	NA	NA	False	AAGAAA	-14	NA	24413725	24356616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
WTC11_00003630	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	15.6199991997439	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-24412851	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
WTC11_00003632	chr1	-	1704	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	53	0	-53	multi-exon	TRUE	canonical	3	542	junction_6	59.2977421342687	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAAGGTTGTTATTTT	-25222161	True	NA	NA	False	TATAAA	-7	NA	25232502	25222328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
WTC11_00003633	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	265.523633599723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-25222145	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
WTC11_00003635	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	33.3691474269272	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
WTC11_00003636	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	6.37704215656966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
WTC11_00003637	chr1	-	881	3	FSM	ENSG00000117616.18	ENST00000564223.5	395	3	-447	-39	4	-3	multi-exon	FALSE	canonical	3	33	junction_1	42	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTTTATTGTATATAT	-25240561	False	NA	-27	True	AATAAA	-17	NA	25244101	25242251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242414_25242538_25242706_25243549
WTC11_00003641	chr1	-	1284	1	FSM	ENSG00000224183.1	ENST00000414693.1	480	1	0	-804	0	804	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGAACTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	25294643	25293359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25293400_25294600
WTC11_00003643	chr1	-	2631	3	FSM	ENSG00000182749.6	ENST00000675840.1	2685	3	50	4	50	-4	multi-exon	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTTTGTTTTTTGT	-25875627	False	NA	-6	True	AATAAA	-15	NA	25875658	25861487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25863862_25870608_25870695_25875487
WTC11_00003644	chr1	-	1849	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	-124	-13	-124	11	multi-exon	FALSE	canonical	3	191	junction_4	1571.22730691648	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTAAAGGGAACCTTAAT	-25906266	False	NA	-32	True	AATAAA	-34	NA	25906277	25900104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
WTC11_00003645	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_4	395.159777811457	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	-25847893	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
WTC11_00003646	chr1	-	2951	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	-4	0	4	multi-exon	FALSE	canonical	3	2927	junction_3	438.453595669548	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGACTTCTTTTGAGTT	-25847891	True	NA	-11	True	AATAAA	-21	NA	25906417	25900563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
WTC11_00003647	chr1	-	1046	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	91	0	91	0	multi-exon	FALSE	canonical	2	96	junction_4	1612.29066470658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	-25906889	False	NA	-42	True	NA	NA	NA	25906900	25900594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
WTC11_00003648	chr1	-	3482	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	5	0	-5	multi-exon	FALSE	canonical	3	54	junction_10	9.37869927015468	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGAAGTTGTTGGCTTG	-25997147	True	NA	-12	True	AAAAAG	-11	NA	25998063	25959771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
WTC11_00003652	chr1	-	1558	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	-3	0	0	multi-exon	TRUE	canonical	3	26	junction_11	27.4551813370176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305448	True	NA	NA	False	AATAAA	-18	NA	26306632	26282280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
WTC11_00003653	chr1	-	2543	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	-1	0	0	multi-exon	FALSE	canonical	3	26	junction_10	28.4608649435208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305452	True	NA	NA	False	AATAAA	-18	NA	26306636	26282280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
WTC11_00003654	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	30.7649997090946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305456	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
WTC11_00003656	chr1	-	6155	22	FSM	ENSG00000176092.17	ENST00000475866.3	6259	22	0	104	0	63	multi-exon	TRUE	canonical	3	10	junction_18	29.1176361453652	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACGCTCAGGCTGGCTT	-26360067	False	206	55	True	NA	NA	NA	26360080	26321801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337_26336371_26336605_26336733_26336840_26336981_26337252_26337380_26337537_26337675_26338011_26338048_26338350_26338478_26339289_26339430_26342753_26342884_26343046_26343160_26343245_26343294_26343744_26346713_26354045_26354786_26356458_26356523_26359936
WTC11_00003657	chr1	-	1186	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17630	-5	-117	5	3prime_fragment	FALSE	canonical	3	53	junction_6	16.7539212589477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTGCACCTTGATAT	-26336472	False	NA	-3	True	NA	NA	NA	26336500	26321859	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
WTC11_00003658	chr1	-	1044	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-93	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_6	18.8738502225228	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336030	True	NA	-8	True	NA	NA	NA	26336476	26321864	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
WTC11_00003662	chr1	-	1123	3	FSM	ENSG00000198746.13	ENST00000450844.1	521	3	-17	-585	-17	16	multi-exon	FALSE	canonical	3	91	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGAGTCTGAAGGTTAG	-26891696	False	NA	0	True	AATAAA	-33	NA	26892909	26890471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26891227_26892410_26892539_26892669
WTC11_00003663	chr1	-	2141	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	-16	0	16	multi-exon	FALSE	canonical	3	91	junction_1	7.55902698029904	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGAGTCTGAAGGTTAG	-26899254	True	NA	0	True	AATAAA	-33	NA	26900467	26890471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
WTC11_00003664	chr1	-	1963	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	0	6	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_4	101.625230627045	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCTTTCTTGGCTG	-26959335	True	NA	-11	True	NA	NA	NA	26960468	26949555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
WTC11_00003665	chr1	-	1861	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	-6	0	6	multi-exon	FALSE	canonical	3	132	junction_3	50.7302232949507	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCTTTCTTGGCTG	-26959335	True	NA	-11	True	NA	NA	NA	26960468	26949555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
WTC11_00003666	chr1	-	2387	2	FSM	ENSG00000158246.8	ENST00000289166.6	2382	2	0	-5	0	5	multi-exon	TRUE	canonical	3	1094	junction_1	0	1202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCATGCTTCCTCTGGGG	-27000945	True	NA	1	True	AATAAA	-22	NA	27012850	27005014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27006958_27012406
WTC11_00003667	chr1	-	4740	12	FSM	ENSG00000090020.11	ENST00000263980.8	4737	12	0	-3	0	3	multi-exon	FALSE	canonical	3	36	junction_10	9.49728103761482	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGCTTTCTGGGGAC	-27150680	True	NA	NA	False	AATAAA	-25	NA	27155125	27098805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27100645_27101202_27101276_27101724_27101827_27102015_27102131_27102384_27102559_27102672_27102744_27103222_27103313_27105884_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
WTC11_00003668	chr1	-	668	2	FSM	ENSG00000090020.11	ENST00000490329.1	660	2	0	-8	0	1	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGGCTGCTTTCTGGGG	-27099671	False	NA	NA	False	AATAAA	-23	NA	27099682	27098807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27099005_27099211
WTC11_00003669	chr1	-	774	1	FSM	ENSG00000214973.3	ENST00000446783.1	640	1	61	-195	61	195	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGCCTTGATCAGGG	NA	False	NA	NA	False	NA	NA	NA	27201412	27200638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27200600_27201400
WTC11_00003671	chr1	-	4439	29	FSM	ENSG00000142733.17	ENST00000357582.3	4438	29	0	-1	0	1	multi-exon	TRUE	canonical	3	12	junction_16	13.364350614487	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCCTGGCAATTTTGG	-27366837	True	NA	-6	True	ATTAAA	-17	NA	27366961	27355182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364660_27364685_27364772_27364913_27366257
WTC11_00003672	chr1	-	956	5	FSM	ENSG00000142733.17	ENST00000470890.1	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	5.40254569624358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGGATGAATGGAGAG	-27357043	False	NA	NA	False	NA	NA	NA	27357167	27355355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589
WTC11_00003674	chr1	-	1442	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	15	0	15	0	multi-exon	FALSE	canonical	3	9	junction_1	3.34477204006491	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27383266	False	NA	-4	True	AATAAA	-17	NA	27383288	27379175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
WTC11_00003675	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	50.2792203599061	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-27477723	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
WTC11_00003677	chr1	-	6580	8	ISM	ENSG00000126705.15	ENST00000673934.1	6428	9	78	12	78	-12	3prime_fragment	FALSE	canonical	3	4	junction_7	12.3371018327909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAACCTTGTGT	-27604055	False	NA	-10	True	ATTAAA	-44	NA	27604066	27534256	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553186_27558304_27558531_27558705_27558884_27603396_27603495_27603727
WTC11_00003682	chr1	-	936	5	FSM	ENSG00000126709.16	ENST00000361157.11	812	5	0	-124	0	124	multi-exon	FALSE	canonical	3	16	junction_4	5.80409338312195	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGATTTTGTTTCTGGG	-27671394	True	NA	NA	False	NA	NA	NA	27672192	27665939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669244_27669347_27672122
WTC11_00003684	chr1	-	1585	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	-1	0	1	multi-exon	FALSE	canonical	3	672	junction_5	48.6441157798145	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTTTTTCTTTCTGAGC	-27909354	True	NA	1	True	AATAAA	-30	NA	27914575	27891522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
WTC11_00003688	chr1	-	6000	18	FSM	ENSG00000158161.16	ENST00000373871.8	5999	18	0	-1	0	1	multi-exon	FALSE	canonical	3	24	junction_11	20.6726002569605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCTGTGTCTTTTCT	-28086142	True	NA	-4	True	AATAAA	-18	NA	28088610	27970342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
WTC11_00003693	chr1	-	1501	10	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	0	15373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	821.089805767799	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTAATGGGGACGTGAG	-28209831	True	NA	NA	False	NA	NA	NA	28233020	28184082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28184109_28200556_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
WTC11_00003694	chr1	-	1311	5	FSM	ENSG00000126698.11	ENST00000603289.5	483	5	1	-829	1	829	multi-exon	FALSE	canonical	0	0	junction_1	1122.36747547316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGCCTGCTGGAAAGGC	-28205335	False	NA	NA	False	AATAAA	-21	NA	28205349	28198626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28199575_28200152_28200233_28201255_28201371_28203746_28203823_28205257
WTC11_00003695	chr1	-	1778	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	-15	0	15	multi-exon	FALSE	canonical	3	2188	junction_2	233.390465475777	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTAAATGTCCTGC	-28209840	True	NA	NA	False	ATTAAA	-33	NA	28233029	28200262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
WTC11_00003696	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	1019.781797043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	-28209836	True	NA	23	True	AATAAA	-12	NA	28233025	28200558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
WTC11_00003702	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	16.539514973407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578406	True	NA	99	True	AATAAA	-28	NA	28581857	28578537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
WTC11_00003703	chr1	-	1084	5	FSM	ENSG00000197989.15	ENST00000461832.2	1082	5	0	-2	0	2	multi-exon	FALSE	canonical	3	62	junction_3	14.4460202131937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTATTTTTTTG	-28578422	True	NA	NA	False	AATAAA	-30	NA	28581873	28578535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581110_28581230_28581589
WTC11_00003705	chr1	-	1569	6	FSM	ENSG00000197989.15	ENST00000648127.1	1871	6	304	-2	301	2	multi-exon	FALSE	canonical	3	62	junction_4	13.3356664625357	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTATTTTTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	28582682	28578535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581110_28581230_28581589
WTC11_00003707	chr1	-	1364	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	-5	0	0	multi-exon	FALSE	canonical	3	14	junction_5	154.175743876915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGTACCTTTGAAATC	-28639248	True	NA	-3	True	AATAAA	-18	NA	28643005	28603095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
WTC11_00003708	chr1	-	1089	6	FSM	ENSG00000120656.14	ENST00000373824.9	1335	6	0	246	0	0	multi-exon	FALSE	canonical	3	358	junction_2	24.071559982685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGTACCTTTGAAATC	-28639310	True	NA	-3	True	AATAAA	-18	NA	28643067	28603095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
WTC11_00003710	chr1	-	2305	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	-5	0	5	multi-exon	FALSE	canonical	3	578	junction_1	61.8721261958889	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTGAATTGAAGTTG	-29168801	True	NA	0	True	AATAAA	-27	NA	29181900	29147737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
WTC11_00003711	chr1	-	2691	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	-496	-931	-478	3	multi-exon	FALSE	canonical	3	122	junction_1	263.705801983953	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGTTTGAATTGAAGT	-29182344	False	NA	-2	True	AATAAA	-25	NA	29182378	29147739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
WTC11_00003712	chr1	-	393	2	FSM	ENSG00000116350.18	ENST00000477193.1	206	2	-11	-176	0	1	multi-exon	FALSE	canonical	3	740	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTTGATGTCTTTTGT	-29159442	False	NA	78	True	NA	NA	NA	29159551	29154695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29154911_29159373
WTC11_00003713	chr1	-	516	3	FSM	ENSG00000116350.18	ENST00000497015.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_2	21	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGTTGATGTCTTTTG	NA	False	NA	77	True	NA	NA	NA	29160563	29154696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29154911_29159373_29159487_29160374
WTC11_00003715	chr1	-	2367	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	148	0	68	multi-exon	FALSE	canonical	3	293	junction_9	38.6353640855718	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGACAGGGGTATGCTT	-29227268	True	NA	64	True	AATAAA	-17	NA	29230934	29192804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
WTC11_00003716	chr1	-	2438	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	-22	0	22	multi-exon	FALSE	canonical	3	49	junction_9	106.842678853964	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGGGGTGCTGTAAGA	-29227258	True	NA	18	True	ATTAAA	-44	NA	29230924	29192850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
WTC11_00003724	chr1	-	6395	3	FSM	ENSG00000162512.16	ENST00000336798.11	6392	3	0	-3	0	2	multi-exon	FALSE	canonical	3	170	junction_2	13	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTGTCCAGAGTATGAG	NA	False	NA	1	True	AATAAA	-18	NA	30878740	30869463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30873378_30874296_30874589_30876551
WTC11_00003725	chr1	-	5312	5	FSM	ENSG00000162512.16	ENST00000339394.7	5246	5	-64	-2	-64	2	multi-exon	FALSE	canonical	3	103	junction_4	37.645550865939	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTGTCCAGAGTATGAG	-30907053	True	NA	1	True	AATAAA	-18	NA	30908822	30869463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30873378_30874296_30874589_30876551_30877166_30878622_30878741_30908448
WTC11_00003726	chr1	-	5112	21	NIC	ENSG00000134644.16	novel	5385	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	107.256829619377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGTGCTTTATTTTA	-31052321	True	NA	-4	True	AATACA	-14	NA	31065683	30931507	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
WTC11_00003730	chr1	-	4632	18	FSM	ENSG00000134644.16	ENST00000424085.6	4631	18	0	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_15	118.39626151397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTTATTTTAACC	-31052333	True	NA	-1	True	AATACA	-17	NA	31065695	30931504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_31028795_31028865_31059203_31059578_31065615
WTC11_00003731	chr1	-	5361	22	FSM	ENSG00000134644.16	ENST00000257075.9	5360	22	0	-1	0	1	multi-exon	FALSE	canonical	3	226	junction_5	73.5022791076141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTTATTTTAACC	-31052336	True	NA	-1	True	AATACA	-17	NA	31065698	30931504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
WTC11_00003732	chr1	-	5386	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	-1	0	1	multi-exon	FALSE	canonical	3	238	junction_5	72.2747968416612	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTTATTTTAACC	-31052355	True	NA	-1	True	AATACA	-17	NA	31065717	30931504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
WTC11_00003741	chr1	-	2996	5	FSM	ENSG00000084628.10	ENST00000526106.5	569	5	0	-2427	0	583	multi-exon	FALSE	canonical	2	7	junction_4	43.7092667520287	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTGCATCTTGGCTC	-31188134	True	NA	-4	True	GATAAA	-27	NA	31188153	31179161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31188049
WTC11_00003742	chr1	-	2922	7	FSM	ENSG00000084628.10	ENST00000373736.7	2922	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	10.5619863451699	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTGTCCTGCCCATTG	-31237075	True	NA	-13	True	ATTAAA	-20	NA	31239887	31179744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31185246_31185328_31188049_31188188_31239493
WTC11_00003743	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_3	116.998364449896	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-31286230	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
WTC11_00003744	chr1	-	743	2	FSM	ENSG00000060688.13	ENST00000486941.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	3	1633	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGGATTGGATTTAT	-31261794	False	NA	-14	True	ATTAAA	-27	NA	31261822	31259672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528
WTC11_00003745	chr1	-	1554	4	FSM	ENSG00000060688.13	ENST00000373720.3	1087	4	-278	-189	-278	47	multi-exon	FALSE	canonical	3	1358	junction_3	127.792366316963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTACTTCCATGAAAA	-31269916	False	NA	46	True	NA	NA	NA	31269944	31259520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157
WTC11_00003747	chr1	-	2729	3	FSM	ENSG00000121769.8	ENST00000497275.5	535	3	-1444	-750	-1444	290	multi-exon	FALSE	canonical	3	265	junction_2	3	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATAGGAAAAATAACTC	-31371004	False	NA	NA	False	NA	NA	NA	31371034	31364962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31365940_31367392_31367495_31369384
WTC11_00003748	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	17.1464281994822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-31368139	True	NA	NA	False	NA	NA	NA	31373076	31365252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
WTC11_00003749	chr1	-	2279	4	FSM	ENSG00000162517.13	ENST00000461006.5	732	4	-1068	-479	-856	5	multi-exon	FALSE	canonical	1	12	junction_1	127.828878670754	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCCACCATGATTTC	-31636308	False	NA	1	True	AATAAA	-22	NA	31636328	31629860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630733_31632494_31632639_31633158_31633315_31635221
WTC11_00003750	chr1	-	1619	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	-5	0	5	multi-exon	TRUE	canonical	3	212	junction_4	36.0234298755685	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCCACCATGATTTC	-31640074	True	NA	1	True	AATAAA	-22	NA	31644876	31629860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
WTC11_00003751	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	112.221012094686	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	-31640094	True	NA	NA	False	NA	NA	NA	31644896	31630448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
WTC11_00003752	chr1	-	5181	71	FSM	ENSG00000084636.18	ENST00000373672.8	5418	71	0	237	0	11	multi-exon	TRUE	canonical	2	6	junction_52	8.90430989430835	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTTTCCCTTCCAGT	-31703960	False	NA	-17	True	AATAAA	-13	NA	31704017	31652499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108_31684232_31684522_31684631_31684820_31684857_31685638_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740_31689852_31690366_31690394_31690528_31690574_31691187_31691227_31691416_31691513_31691597_31691643_31692004_31692068_31692473_31692510_31692597_31692643_31692766_31692809_31693091_31693155_31694143_31694171_31695185_31695222_31695760_31695788_31696087_31696142_31696962_31697089_31697219_31697301_31697905_31698173_31698482_31698607_31699812_31699931_31700040_31700116_31702120_31702228_31703836
WTC11_00003753	chr1	-	838	4	FSM	ENSG00000084636.18	ENST00000461217.1	852	4	14	0	14	0	multi-exon	FALSE	canonical	3	33	junction_3	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGTAGGAAATACCACC	NA	False	NA	NA	False	NA	NA	NA	31655834	31653603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31653677_31653866_31654044_31654791_31654859_31655313
WTC11_00003755	chr1	-	5400	33	FSM	ENSG00000121753.13	ENST00000373655.6	5400	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	27.9043427399751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTGAGCTGTTTG	-31764013	False	NA	-11	True	AATAAA	-15	NA	31764035	31727116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728024_31728082_31728181_31728278_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735282_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31742837_31743003_31744192_31744358_31744647_31744732_31755998_31756816_31757200_31757282_31757381_31757512_31763883
WTC11_00003756	chr1	-	5174	28	FSM	ENSG00000121753.13	ENST00000398542.5	5176	28	0	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_11	21.7859646994921	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGCTGCTGAGCTGTT	-31763335	True	NA	-13	True	AATAAA	-13	NA	31764340	31727118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998_31756816_31763883
WTC11_00003757	chr1	-	5708	33	FSM	ENSG00000121753.13	ENST00000373658.8	5708	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	28.050578620369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTGAGCTGTTTG	-31763335	True	NA	-11	True	AATAAA	-15	NA	31764340	31727116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735282_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31742837_31743003_31744192_31744358_31744647_31744732_31755998_31756816_31757200_31757282_31757381_31757512_31763883
WTC11_00003758	chr1	-	1718	9	FSM	ENSG00000121753.13	ENST00000530999.1	1718	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	29.3374760332241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGGAGGGGGGAGGG	-31735311	False	NA	-64	True	NA	NA	NA	31735347	31727169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728024_31728082_31728181_31728278_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182
WTC11_00003764	chr1	-	3927	6	FSM	ENSG00000184007.22	ENST00000647444.2	3910	6	0	-17	0	17	multi-exon	FALSE	canonical	3	1566	junction_5	73.9540397814751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTCAAGAGTTTATG	-31925252	True	NA	-4	True	AATAAA	-35	NA	31938368	31906403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
WTC11_00003765	chr1	-	1032	4	FSM	ENSG00000184007.22	ENST00000457805.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	729.50942420232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTCTAAGGAAAACCAGC	-31919358	False	NA	NA	False	TTTAAA	-14	NA	31919368	31908533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31908961_31910037_31910113_31911695_31911827_31918969
WTC11_00003774	chr1	-	1867	9	FSM	ENSG00000160055.20	ENST00000461402.5	1866	9	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_2	17.6595406225643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	-32221853	True	NA	-5	True	AATATA	-13	NA	32222347	32214476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32215050_32215135_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
WTC11_00003778	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.1887220003001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221859	True	NA	-3	True	AATAAA	-16	NA	32222353	32216199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
WTC11_00003780	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.93310961716756	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	-32240240	False	NA	-3	True	AATAAA	-18	NA	32240422	32231659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
WTC11_00003781	chr1	-	1599	4	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	0	63146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6339.44799559779	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGGCACGATGGCTCAT	-32269764	True	NA	NA	False	NA	NA	NA	32336233	32270692	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32270719_32280443_32280475_32333842_32335098_32335946
WTC11_00003783	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	13448	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-32269764	True	NA	-10	True	AATAAA	-14	NA	32336233	32333838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32335098_32335946
WTC11_00003784	chr1	-	2760	2	FSM	ENSG00000225828.2	ENST00000416512.1	2759	2	0	-1	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGGCTGGCAGTGTATG	NA	False	NA	-3	True	AATAAA	-25	NA	32364223	32361269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32361536_32361729
WTC11_00003785	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_10	20.630317496345	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-32390784	True	NA	NA	False	NA	NA	NA	32394441	32364632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
WTC11_00003787	chr1	-	2925	12	FSM	ENSG00000160058.19	ENST00000444377.5	2925	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	79.2434266116567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAAAGGTGTCTGGG	-32390771	True	NA	-10	True	ATTAAA	-12	NA	32394428	32365112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32366655_32368446_32368551_32369229_32369339_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
WTC11_00003788	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	59.359128807956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	-32390769	True	NA	-68	True	ATTAAA	-15	NA	32394426	32365170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
WTC11_00003794	chr1	-	501	7	NNC	ENSG00000176261.16	novel	1567	7	NA	NA	0	1948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.373396576739	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGAAAGCTAATACAGT	-32638448	True	NA	NA	False	NA	NA	NA	32650525	32598223	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32598249_32621832_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
WTC11_00003795	chr1	-	965	3	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	2.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAATAAAAATAAGTTTC	-32612149	False	NA	NA	False	NA	NA	NA	32612212	32608584	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_32609328_32610096_32610149_32612042
WTC11_00003796	chr1	-	1584	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	25	-1021	0	0	multi-exon	FALSE	canonical	3	71	junction_6	320.050733825471	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-32638448	True	NA	-3	True	AATAAA	-19	NA	32650525	32620819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
WTC11_00003797	chr1	-	1570	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	-3	0	3	multi-exon	FALSE	canonical	3	449	junction_3	168.835883495054	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTGTTGTTTTTGTTT	-32638473	True	NA	0	True	AATAAA	-22	NA	32650550	32620816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
WTC11_00003798	chr1	-	1311	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	-494	0	3	multi-exon	FALSE	canonical	3	71	junction_2	342.639103949849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTGTTGTTTTTGTTT	-32638472	True	NA	0	True	AATAAA	-22	NA	32650549	32620816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
WTC11_00003799	chr1	-	1632	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	-24	-1010	0	0	multi-exon	FALSE	canonical	3	70	junction_5	276.755457639652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-32638472	True	NA	-3	True	AATAAA	-19	NA	32650549	32620819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
WTC11_00003800	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	313.148527060243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-32638477	True	NA	NA	False	NA	NA	NA	32650554	32621603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
WTC11_00003801	chr1	-	555	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_5	304.929500048782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638458	True	NA	-6	True	AATAAA	-17	NA	32650535	32621829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650432
WTC11_00003802	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	215.140326298907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638483	True	NA	-6	True	AATAAA	-17	NA	32650560	32621829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
WTC11_00003803	chr1	-	565	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	-17	0	0	multi-exon	FALSE	canonical	3	5	junction_5	318.795608501748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-32638448	True	NA	-17	True	AATAAA	-6	NA	32650525	32621840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
WTC11_00003804	chr1	-	767	4	FSM	ENSG00000176261.16	ENST00000479075.6	769	4	0	2	0	0	multi-exon	FALSE	canonical	3	47	junction_3	332.322467224565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTGAAAGTCTTTT	-32650843	False	NA	NA	False	AAGAAA	-22	NA	32650903	32631826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32631880_32633644_32633728_32633950_32634111_32650432
WTC11_00003806	chr1	-	2501	4	FSM	ENSG00000134684.12	ENST00000469100.5	2247	4	0	-254	0	254	multi-exon	FALSE	canonical	3	1178	junction_3	45.6386775541195	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCCACAGCCAAGTTTC	-32782074	False	NA	NA	False	NA	NA	NA	32782103	32774982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047
WTC11_00003809	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	348.299885156455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-32797091	True	NA	-56	True	NA	NA	NA	32817357	32775282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
WTC11_00003810	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_11	328.569476407116	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-32797114	True	NA	-82	True	AATGAA	-39	NA	32817380	32775308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
WTC11_00003813	chr1	-	1031	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	-1	0	0	multi-exon	FALSE	canonical	3	216	junction_5	18.8637217960826	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGCTGCATGCAGGGGG	-32900376	True	NA	0	True	ATTAAA	-18	NA	32901389	32894593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
WTC11_00003815	chr1	-	768	5	FSM	ENSG00000121900.19	ENST00000475208.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	97.345711256326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGAGCTGCACCAGC	-32900425	True	NA	NA	False	NA	NA	NA	32901438	32894845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32898125_32898320_32901222
WTC11_00003816	chr1	-	2857	9	FSM	ENSG00000116514.17	ENST00000373456.11	2560	9	-236	-61	-112	61	multi-exon	FALSE	canonical	3	14	junction_7	20.357738086536	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGTCTCTAGACCTGA	-32963920	True	NA	61	True	NA	NA	NA	32964921	32936383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32937260_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948367_32949568_32949775_32964050
WTC11_00003817	chr1	-	2681	9	FSM	ENSG00000116514.17	ENST00000235150.5	2677	9	0	-4	0	0	multi-exon	FALSE	canonical	3	55	junction_7	7.59008399163013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTTTCCTTGGCTTGG	-32963808	True	NA	0	True	AATAAA	-24	NA	32964809	32936444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32937260_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948364_32949568_32949775_32964050
WTC11_00003820	chr1	-	5973	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	-3	0	3	multi-exon	FALSE	canonical	3	1287	junction_3	40.1865649191368	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCATGCATTATCTCA	-33016813	True	NA	-3	True	ATTAAA	-19	NA	33036883	33007982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
WTC11_00003821	chr1	-	3603	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	-3	-3	0	3	multi-exon	FALSE	canonical	3	600	junction_1	286.414278430544	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCATGCATTATCTCA	-33016816	True	NA	-3	True	ATTAAA	-19	NA	33036886	33007982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
WTC11_00003824	chr1	-	2591	7	NIC	ENSG00000004455.17	novel	2840	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	477.395945614213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGGACTCTTTTAA	-33016807	True	NA	-53	True	NA	NA	NA	33036877	33010118	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_33010834_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
WTC11_00003829	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	616.846122536965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	-33016832	True	NA	NA	False	NA	NA	NA	33036902	33013206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
WTC11_00003833	chr1	-	3817	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	10.779030568655	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-33180787	True	NA	0	True	ATTAAA	-22	NA	33182043	33145398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
WTC11_00003836	chr1	-	2560	7	FSM	ENSG00000134686.20	ENST00000373418.7	2550	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	22	junction_5	6.23609564462324	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	-33349305	True	NA	-2	True	AATAAA	-14	NA	33349895	33323625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334089_33334293_33349596
WTC11_00003837	chr1	-	4133	24	FSM	ENSG00000121904.19	ENST00000373380.5	4379	24	246	0	246	0	multi-exon	FALSE	canonical	2	6	junction_1	9.60918747511709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	33709258	33591806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33592490_33600864_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485_33626582_33633421_33633536_33635213_33635331_33636359_33636555_33646647_33646836_33652322_33652462_33657945_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088
WTC11_00003838	chr1	-	9217	44	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-54	84693	-54	-2	5prime_fragment	FALSE	canonical	2	13	junction_43	8.51334332694787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-34163139	True	NA	NA	False	NA	NA	NA	34165284	33598690	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485_33626582_33633421_33633536_33635213_33635331_33636359_33636555_33646647_33646836_33652322_33652462_33657945_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088_33709259_33714586_33714776_33716285_33716502_33724196_33724314_33724515_33724705_33725348_33725537_33726546_33726686_33739139_33739335_33743279_33743607_33772568_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
WTC11_00003840	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	-34851528	True	NA	0	True	ATTAAA	-15	NA	34859749	34850361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34855983_34859676
WTC11_00003841	chr1	-	2467	3	NNC	ENSG00000163866.9	novel	5694	2	NA	NA	0	1680	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	204.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGGAAGAAGCATAAGAA	-34851496	True	NA	NA	False	AGTAAA	-8	NA	34859717	34853369	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_34853876_34854062_34855983_34859676
WTC11_00003842	chr1	-	3992	12	FSM	ENSG00000116544.12	ENST00000373347.6	3921	12	-71	0	-71	0	multi-exon	TRUE	canonical	3	19	junction_8	40.9496768370381	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGCCAGCTGCTCTCTC	NA	False	NA	-26	True	AATAAA	-15	NA	34929721	34865435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34866302_34867047_34867192_34867535_34867628_34868604_34869090_34884977_34885064_34885477_34885792_34886071_34886286_34899668_34899742_34900067_34900274_34904276_34905435_34907354_34907438_34929450
WTC11_00003843	chr1	-	1070	1	FSM	ENSG00000241014.2	ENST00000642415.1	926	1	652	-796	652	25	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCCTTGCATATAATAAG	-34974582	False	NA	NA	False	NA	NA	NA	34976743	34975673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34975700_34976700
WTC11_00003849	chr1	-	2691	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	0	11	0	-5	multi-exon	FALSE	canonical	3	43	junction_3	32.5678778348646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTTTCTCATGGTTT	-35031095	False	NA	-11	True	ATTAAA	-14	NA	35031905	35017254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
WTC11_00003851	chr1	-	1433	3	FSM	ENSG00000116560.11	ENST00000466213.5	1431	3	0	-2	0	0	multi-exon	FALSE	canonical	3	239	junction_1	193	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35179192	False	NA	-6	True	AATAAA	-19	NA	35179246	35176377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176472_35177318_35177400_35177988
WTC11_00003852	chr1	-	2835	3	FSM	ENSG00000116560.11	ENST00000468598.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	130	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35180604	False	NA	-6	True	AATAAA	-19	NA	35180645	35176377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176475_35177318_35177400_35177988
WTC11_00003854	chr1	-	464	6	FSM	ENSG00000116560.11	ENST00000460428.5	464	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	1039.60811847542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35188029	False	260	-6	True	AATAAA	-19	NA	35188042	35176377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972
WTC11_00003855	chr1	-	872	9	FSM	ENSG00000116560.11	ENST00000470472.5	874	9	0	2	0	0	multi-exon	FALSE	canonical	3	80	junction_3	938.692008861266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35190561	False	166	-8	True	AATAAA	-17	NA	35190574	35176379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497
WTC11_00003857	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_9	195.766868153594	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-35104552	True	NA	-14	True	CATAAA	-14	NA	35193145	35182935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
WTC11_00003860	chr1	-	4636	21	FSM	ENSG00000142687.18	ENST00000426982.6	3213	21	52	-1475	0	2	multi-exon	FALSE	canonical	3	30	junction_20	57.8863325837801	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGCTGGGTGTGCT	-35556995	True	NA	-5	True	ATTAAA	-20	NA	35557603	35433489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557549
WTC11_00003861	chr1	-	4372	15	FSM	ENSG00000142687.18	ENST00000485551.5	4398	15	0	26	0	-26	multi-exon	FALSE	canonical	3	238	junction_10	25.7285674625205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAATAAAGCCAGACTC	-35470891	False	NA	NA	False	NA	NA	NA	35470906	35438567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862
WTC11_00003862	chr1	-	2158	13	FSM	ENSG00000142687.18	ENST00000440579.5	2171	13	13	0	13	0	multi-exon	FALSE	canonical	3	11	junction_12	70.3089906531637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGTACCTCTCTGCC	-35554366	False	5389	-7	True	NA	NA	NA	35554974	35451634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35554899
WTC11_00003863	chr1	-	872	6	FSM	ENSG00000142687.18	ENST00000470388.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	86.7585154322041	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATGTTTTCAGCCCTGG	-35551986	True	NA	NA	False	NA	NA	NA	35557375	35466609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35554349_35554520_35557206
WTC11_00003864	chr1	-	889	4	FSM	ENSG00000142687.18	ENST00000469892.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	84.4801094275386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGCTGTCCCCCAGCC	-35552014	True	NA	NA	False	AGTAAA	-17	NA	35557403	35479059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35479213_35506611_35507136_35554349_35554520_35557361
WTC11_00003868	chr1	-	578	2	FSM	ENSG00000142686.8	ENST00000503824.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCCTGAGGAGGAGCTC	-35716896	False	NA	NA	False	NA	NA	NA	35716911	35716159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35716327_35716500
WTC11_00003869	chr1	-	492	3	FSM	ENSG00000142686.8	ENST00000453178.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACGAGAATTGGCATGGG	-35718423	True	NA	NA	False	NA	NA	NA	35718894	35716197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35716327_35716500_35716676_35718706
WTC11_00003870	chr1	-	4749	25	FSM	ENSG00000092853.14	ENST00000251195.9	4769	25	0	20	0	-20	multi-exon	FALSE	canonical	3	10	junction_1	28.5105974449268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAAATTTCTTTTCCA	-35767548	True	NA	NA	False	TTTAAA	-14	NA	35769967	35720237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35720981_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
WTC11_00003871	chr1	-	8510	25	FSM	ENSG00000092853.14	ENST00000318121.8	8512	25	0	2	0	-2	multi-exon	FALSE	canonical	3	61	junction_15	19.2757763930679	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCCTCTGTTTATAAAA	-35767559	True	NA	-3	True	AATAAA	-16	NA	35769978	35732113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35736607_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
WTC11_00003874	chr1	-	2660	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-39	22953	0	-12393	5prime_fragment	FALSE	canonical	3	99	junction_4	17.2165084516375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGGAATTCAGAGAAGCA	-35767548	True	NA	33	True	AATAAA	-5	NA	35769967	35759357	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
WTC11_00003876	chr1	-	1283	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	-1	0	-1	multi-exon	FALSE	canonical	3	476	junction_4	35.5598087733891	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCCTGTTTTCTTTCTG	-36146451	True	NA	-1	True	AATAAA	-27	NA	36149486	36136570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
WTC11_00003877	chr1	-	1112	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	2	0	0	multi-exon	FALSE	canonical	3	26	junction_2	260	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	-36149494	False	NA	-2	True	AATAAA	-26	NA	36149514	36136571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36149336
WTC11_00003878	chr1	-	951	5	FSM	ENSG00000054116.12	ENST00000373163.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	228.815837520046	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTCAAACCATTTTAC	-36146416	True	NA	85	True	GGGGCT	-29	NA	36149451	36136944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149259
WTC11_00003880	chr1	-	429	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	-208	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-36146461	True	NA	-24	True	AATAAA	-4	NA	36149496	36137053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36149336
WTC11_00003882	chr1	-	980	3	FSM	ENSG00000142694.7	ENST00000490466.2	980	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	3	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCTCCCTCTGTTA	-36321495	True	NA	-1	True	AAGAAA	-17	NA	36323645	36322029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36322726_36322970_36323068_36323458
WTC11_00003884	chr1	-	3653	11	FSM	ENSG00000196182.11	ENST00000373132.4	3645	11	0	-8	0	4	multi-exon	FALSE	canonical	3	88	junction_1	20.8614476966485	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCTCCTGCCTTCT	-36384195	True	NA	0	True	AATAAA	-25	NA	36385924	36339619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
WTC11_00003885	chr1	-	4837	9	FSM	ENSG00000196182.11	ENST00000359297.6	4837	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	21.0876148485314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTGCGTCTCCTGCC	NA	False	NA	-4	True	AATAAA	-21	NA	36361340	36339623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220
WTC11_00003888	chr1	-	883	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	-23	0	23	multi-exon	FALSE	canonical	3	502	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCAGTTGTGTTCATT	-36393165	True	NA	-3	True	ATTAAA	-38	NA	36397908	36393412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36394154_36397766
WTC11_00003890	chr1	-	931	9	NNC	ENSG00000116898.12	novel	953	8	NA	NA	0	45558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	576.142546923068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATTTATTAATTAAAT	-36443054	True	NA	NA	False	NA	NA	NA	36464384	36410159	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_36410195_36455774_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
WTC11_00003891	chr1	-	1448	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	3	4	3	0	multi-exon	FALSE	canonical	2	8	junction_5	3.44623609317129	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTTTCCCATTTTATT	-36450289	True	NA	-3	True	AATATA	-16	NA	36450448	36417909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
WTC11_00003892	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	57.7057985273011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-36443054	True	NA	25	True	GGGGCT	-15	NA	36464384	36455717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
WTC11_00003893	chr1	-	9465	16	FSM	ENSG00000163873.10	ENST00000373091.8	9491	16	26	0	26	0	multi-exon	FALSE	canonical	2	3	junction_1	4.89716471258852	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTGAGGCGTGTTTTC	-37034283	True	NA	0	True	AATAAA	-20	NA	37034489	36795526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36802046_36804986_36805238_36806103_36806327_36817059_36817278_36819735_36819855_36825602_36825827_36841735_36841940_36850310_36850425_36853614_36853723_36859107_36859252_36859843_36860018_36869747_36869802_36872187_36872370_36880633_36880892_36890919_36891097_37033993
WTC11_00003894	chr1	-	4584	15	FSM	ENSG00000163873.10	ENST00000373093.4	2955	15	-360	-1269	26	1269	multi-exon	FALSE	canonical	2	8	junction_11	4.34013072313237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCACTCTCCTCCCCT	-37034283	True	NA	NA	False	AAAAAG	-40	NA	37034489	36803348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36805238_36806103_36806327_36817059_36817278_36819735_36819855_36825602_36825827_36841735_36841940_36850310_36850425_36853614_36853723_36859107_36859252_36859843_36860018_36869747_36869802_36872187_36872370_36880633_36880892_36890919_36891097_37033993
WTC11_00003895	chr1	-	1358	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	58	3	12	0	multi-exon	FALSE	canonical	2	4	junction_2	1	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-37474293	True	NA	-5	True	AATAAA	-17	NA	37474374	37454878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37455913_37456366_37456460_37474143
WTC11_00003897	chr1	-	4671	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	31	0	-31	multi-exon	TRUE	canonical	3	340	junction_4	34.3834585552737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATTTATAAATAAAAGG	-37510726	True	NA	NA	False	AATATA	-33	NA	37514766	37490023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
WTC11_00003898	chr1	-	2168	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	-760	0	0	multi-exon	FALSE	canonical	3	72	junction_3	145.724649491388	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-37510716	True	NA	-3	True	AATAAA	-18	NA	37514756	37492574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
WTC11_00003899	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	180.676506497109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-37510723	True	NA	-3	True	AATAAA	-18	NA	37514763	37492574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
WTC11_00003902	chr1	-	814	4	FSM	ENSG00000163875.16	ENST00000485039.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_2	27.6526068692749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCTTTGCCTACTC	-37513506	False	4040	NA	False	GATAAA	-15	NA	37513520	37501414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37501997_37509277_37509324_37509454_37509543_37513422
WTC11_00003903	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.64279609239471	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-37552378	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
WTC11_00003905	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_9	51.119207088269	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	-37589626	True	NA	-38	True	ATTAAA	-18	NA	37595937	37566815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
WTC11_00003907	chr1	-	2484	6	NNC	ENSG00000116922.15	novel	919	5	NA	NA	0	22055	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.597770133052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATGCTCACCTCAT	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37659514	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37659543_37681570_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690215
WTC11_00003908	chr1	-	2705	6	NNC	ENSG00000116922.15	novel	919	5	NA	NA	0	22059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.466193373049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCTCACCTCATGTTG	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37659510	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37659543_37681570_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
WTC11_00003909	chr1	-	2706	6	NNC	ENSG00000116922.15	novel	2696	5	NA	NA	0	22059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.337408290943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCTCACCTCATGTTG	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37659510	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37659543_37681570_37683161_37683318_37683442_37686272_37686453_37689605_37689884_37690001
WTC11_00003910	chr1	-	2461	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	111.266290942046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686724	True	NA	0	True	AATAAA	-13	NA	37690504	37681569	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683442_37686272_37686453_37689605_37689884_37690215
WTC11_00003911	chr1	-	2677	5	NIC	ENSG00000116922.15	novel	919	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	130.171761530679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGTGTCAAGTCTTAT	-37686724	True	NA	-1	True	AATAAA	-12	NA	37690504	37681570	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683442_37686272_37686453_37689605_37689887_37690001
WTC11_00003912	chr1	-	2354	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	1	0	0	multi-exon	FALSE	canonical	3	24	junction_4	117.885537705013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGTGTCAAGTCTTAT	-37686740	True	NA	-1	True	AATAAA	-12	NA	37690520	37681570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
WTC11_00003913	chr1	-	2695	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	1	0	0	multi-exon	FALSE	canonical	3	70	junction_4	100.193562667469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGTGTCAAGTCTTAT	-37686749	True	NA	-1	True	AATAAA	-12	NA	37690529	37681570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
WTC11_00003919	chr1	-	2135	5	FSM	ENSG00000196449.4	ENST00000373044.3	1848	5	0	-287	0	287	multi-exon	FALSE	canonical	3	335	junction_2	27.6857363998143	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGCCAGGTGGCCAGGC	-37803193	True	NA	NA	False	NA	NA	NA	37808208	37802657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807791
WTC11_00003920	chr1	-	7954	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	-17	0	17	multi-exon	FALSE	canonical	2	10	junction_4	2.4576411454889	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTACCAACCCTGCC	-37858552	True	NA	11	True	ATTAAA	-30	NA	37859592	37809556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
WTC11_00003921	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	18.6070269867918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37928996	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
WTC11_00003922	chr1	-	4449	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	1	0	-1	0	multi-exon	FALSE	non_canonical	0	0	junction_17	84.1012082702394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37946112	True	NA	-2	True	GATAAA	-17	NA	37947052	37860696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
WTC11_00003924	chr1	-	2765	19	NNC	ENSG00000183431.12	novel	2774	17	NA	NA	0	56903	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	513.595042113873	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTAAACATGGAGATCT	-37968463	True	NA	NA	False	NA	NA	NA	37989973	37900071	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37900090_37932363_37932387_37956975_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
WTC11_00003926	chr1	-	2791	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	-17	0	17	multi-exon	FALSE	canonical	3	1391	junction_7	131.475981052624	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTACACATTTATATCTT	-37968512	True	NA	3	True	AATAAA	-35	NA	37990022	37956957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
WTC11_00003927	chr1	-	793	4	FSM	ENSG00000183431.12	ENST00000460925.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_2	89.3843138115159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGGCCCAAAGCCTTCCA	-37979176	False	NA	NA	False	NA	NA	NA	37979199	37969386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37969465_37969570_37969736_37976883_37976954_37978719
WTC11_00003930	chr1	-	1662	6	FSM	ENSG00000183386.10	ENST00000373016.4	1656	6	0	-6	0	6	multi-exon	FALSE	canonical	3	101	junction_5	30.7571129984594	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCGTGTGTGTGTGTGT	-38003626	True	NA	-3	True	AATAAA	-20	NA	38005514	37996763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005356
WTC11_00003934	chr1	-	2971	1	FSM	ENSG00000185668.8	ENST00000373012.5	2965	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCTTTTTACTGC	-38044511	True	NA	2	True	AGTAAA	-38	NA	38046793	38043822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38043800_38046800
WTC11_00003936	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	9.72967967955095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-38858483	True	NA	-2	True	AATAAA	-17	NA	38859772	38838197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
WTC11_00003937	chr1	-	472	2	FSM	ENSG00000116954.8	ENST00000496778.1	568	2	93	3	93	-3	multi-exon	FALSE	canonical	3	130	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAACTGGGATTGTTC	-38851313	False	NA	NA	False	NA	NA	NA	38852602	38851514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38851758_38852373
WTC11_00003938	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	21.4184499906039	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	-38868844	True	NA	NA	False	ATTAAA	-17	NA	38873348	38862492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
WTC11_00003939	chr1	-	2688	4	FSM	ENSG00000214114.9	ENST00000494695.4	750	4	-13	-1925	-13	182	multi-exon	FALSE	canonical	3	28	junction_2	162.708327998293	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGTTAAAAAATGCAGT	-38868877	True	NA	NA	False	AAAAAG	-21	NA	38873381	38862310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38864715_38866879_38867000_38873017_38873091_38873290
WTC11_00003940	chr1	-	2488	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	-18	0	16	multi-exon	FALSE	canonical	3	26	junction_5	165.662384113606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTACTCTATGAATT	-39576240	False	NA	4	True	AATAAA	-39	NA	39576253	39560797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003941	chr1	-	3066	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	-18	0	16	multi-exon	FALSE	canonical	3	177	junction_6	130.79024768265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTACTCTATGAATT	-39576731	False	NA	4	True	AATAAA	-39	NA	39576744	39560797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003942	chr1	-	3034	15	FSM	ENSG00000090621.15	ENST00000372856.7	3016	15	0	-18	0	16	multi-exon	FALSE	canonical	3	58	junction_5	158.657971879185	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTACTCTATGAATT	-39576738	False	NA	4	True	AATAAA	-39	NA	39576751	39560797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003943	chr1	-	3160	16	FSM	ENSG00000090621.15	ENST00000372858.8	3142	16	0	-18	0	16	multi-exon	FALSE	canonical	3	299	junction_6	109.878033392586	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTACTCTATGAATT	-39564737	True	NA	4	True	AATAAA	-39	NA	39576790	39560797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003944	chr1	-	2102	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	-20	0	0	multi-exon	FALSE	canonical	3	42	junction_7	167.22139682336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATCTCCATAAA	-39575773	False	NA	23	True	NA	NA	NA	39575786	39560836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003945	chr1	-	2870	14	FSM	ENSG00000090621.15	ENST00000676523.1	2849	14	0	-21	0	0	multi-exon	FALSE	canonical	3	418	junction_11	88.6408884239757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39575911	False	NA	-14	True	AATAAA	-21	NA	39575924	39560815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
WTC11_00003949	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.06155281280883	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-39639374	True	NA	2	True	AATAAA	-20	NA	39639643	39623434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
WTC11_00003950	chr1	-	2051	1	FSM	ENSG00000198754.5	ENST00000327582.5	1826	1	-244	19	-244	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAGGAAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	39771592	39769541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39769500_39771600
WTC11_00003951	chr1	-	4122	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	929	0	-929	multi-exon	FALSE	canonical	0	0	junction_9	42.6234677143941	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTTGTAAGTGGGTA	-39880751	True	NA	NA	False	AGTAAA	-40	NA	39883504	39839038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
WTC11_00003952	chr1	-	1902	10	NNC	ENSG00000043514.17	novel	5051	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_7	37.4564768006948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880689	True	NA	-24	True	AATAAA	-17	NA	39883442	39841050	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854067_39857274_39857418_39883317
WTC11_00003954	chr1	-	1581	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	59.9872671674767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880721	True	NA	-24	True	AATAAA	-17	NA	39883474	39841050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847985_39848098_39850118_39850262_39883317
WTC11_00003955	chr1	-	1573	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	50.3587132480567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880743	True	NA	-24	True	AATAAA	-17	NA	39883496	39841050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39883317
WTC11_00003956	chr1	-	5354	2	FSM	ENSG00000116990.11	ENST00000372816.3	3522	2	0	-1832	0	1830	multi-exon	FALSE	canonical	3	184	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTACAATAGTATGGAC	-39900594	True	NA	NA	False	AATAAA	-15	NA	39901917	39893595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39897971_39900938
WTC11_00003957	chr1	-	3256	3	FSM	ENSG00000116990.11	ENST00000397332.2	3256	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	27	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGGGCAGCTTAT	-39901676	True	NA	-4	True	AATAAA	-17	NA	39902013	39895425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39897971_39900938_39901444_39901807
WTC11_00003958	chr1	-	1944	2	FSM	ENSG00000116990.11	ENST00000372815.1	1944	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGGTGGAGTGGTAGAG	-39900596	True	NA	-2	True	AATAAA	-16	NA	39901919	39899611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39901444_39901807
WTC11_00003959	chr1	-	2310	10	NNC	ENSG00000131238.18	novel	2284	9	NA	NA	0	50362	intron_retention	FALSE	non_canonical	0	0	junction_1	508.945193391728	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCTTCCTTTGAAAAAC	-40082197	True	NA	NA	False	NA	NA	NA	40097250	40022347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40022376_40072711_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
WTC11_00003960	chr1	-	2311	10	NNC	ENSG00000131238.18	novel	2388	10	NA	NA	0	50362	intron_retention	FALSE	non_canonical	0	0	junction_1	508.945193391728	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCTTCCTTTGAAAAAC	-40082197	True	NA	NA	False	NA	NA	NA	40097250	40022347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40022378_40072712_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
WTC11_00003963	chr1	-	2490	8	FSM	ENSG00000131238.18	ENST00000641236.1	2481	8	0	-9	0	0	multi-exon	FALSE	canonical	3	1526	junction_2	73.1590383886993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-40082197	True	NA	-34	True	NA	NA	NA	40097250	40072728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092508_40097114
WTC11_00003966	chr1	-	1966	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	-9	0	0	multi-exon	FALSE	canonical	3	14	junction_5	627.032885899934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-40082207	True	NA	-34	True	NA	NA	NA	40097260	40072728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
WTC11_00003967	chr1	-	1559	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	13	-31	13	31	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATTCAGTTGTTATGT	-40257150	True	NA	27	True	NA	NA	NA	40257954	40256395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40256400_40258000
WTC11_00003970	chr1	-	7264	8	FSM	ENSG00000117016.10	ENST00000372684.8	7259	8	0	-5	0	5	multi-exon	FALSE	canonical	3	58	junction_2	6.49018096662888	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGCTTTCTGTAGATG	-40664477	True	NA	1	True	ATTAAA	-22	NA	40665682	40620674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
WTC11_00003971	chr1	-	1687	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGTTACTT	-40691503	True	NA	NA	False	NA	NA	NA	40692066	40690379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40690400_40692100
WTC11_00003972	chr1	-	1312	1	FSM	ENSG00000179862.7	ENST00000372638.4	1310	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTTTTCATTTCCTT	-40859587	True	NA	-2	True	AATAAA	-19	NA	40862363	40861051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40861100_40862400
WTC11_00003973	chr1	-	3275	15	FSM	ENSG00000010803.16	ENST00000326197.11	3275	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	18.2970110194233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	NA	False	NA	-28	True	AATAAA	-15	NA	41160898	41027201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874
WTC11_00003974	chr1	-	3201	15	FSM	ENSG00000010803.16	ENST00000402904.6	3204	15	1	2	1	0	multi-exon	FALSE	canonical	3	17	junction_12	17.6588995889856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	NA	False	NA	-28	True	AATAAA	-15	NA	41161432	41027201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363
WTC11_00003977	chr1	-	3110	15	FSM	ENSG00000010803.16	ENST00000337495.9	3108	15	0	-2	0	0	multi-exon	FALSE	canonical	2	9	junction_11	21.8754591788542	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTTTTTAATCAGTTA	-41241552	True	NA	-26	True	AATAAA	-17	NA	41242110	41027199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
WTC11_00003978	chr1	-	3455	16	FSM	ENSG00000010803.16	ENST00000372596.5	3323	16	6	-138	0	136	multi-exon	FALSE	canonical	3	17	junction_11	20.4439613469493	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGCCAAGGTGGGAGGA	-41241552	True	NA	NA	False	CATAAA	-45	NA	41242110	41027063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
WTC11_00003980	chr1	-	3664	18	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	0	136	intron_retention	FALSE	canonical	3	25	junction_13	18.336342418465	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGCCAAGGTGGGAGGA	-41241552	True	NA	NA	False	CATAAA	-45	NA	41242110	41027063	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
WTC11_00003983	chr1	-	1336	2	FSM	ENSG00000286640.2	ENST00000662236.2	1362	2	27	-1	25	1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAATGATTTAAAATTCA	-41306111	False	NA	NA	False	AATAAA	-18	NA	41306121	41302916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41303973_41305841
WTC11_00003984	chr1	-	4461	3	FSM	ENSG00000198815.9	ENST00000372571.5	4468	3	0	7	0	-1	multi-exon	FALSE	canonical	3	120	junction_2	10.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACACTGATTGGTCTCC	-42189793	False	NA	-10	True	AATAAA	-21	NA	42189809	42176545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42179826_42181916_42182025_42188736
WTC11_00003985	chr1	-	5090	12	NIC	ENSG00000198815.9	novel	5352	15	NA	NA	-8370	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	41.5964477186444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACAACACTGATTGGT	NA	False	NA	-14	True	AATAAA	-17	NA	42323829	42176549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42323683
WTC11_00003986	chr1	-	5234	13	FSM	ENSG00000198815.9	ENST00000361346.6	5225	13	0	-9	0	0	multi-exon	FALSE	canonical	3	74	junction_8	25.2535751044393	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTGGTCTCCGTTGTTT	-42330012	True	NA	-3	True	AATAAA	-28	NA	42335235	42176538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
WTC11_00003988	chr1	-	1326	8	FSM	ENSG00000198815.9	ENST00000445886.5	1326	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	34.348751574022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCTCTCCACATCAACA	-42329998	True	NA	NA	False	NA	NA	NA	42335221	42191405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
WTC11_00003991	chr1	-	2837	5	FSM	ENSG00000164007.11	ENST00000296387.6	2841	5	4	0	4	0	multi-exon	FALSE	canonical	3	4	junction_1	7.79021822544144	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42739585	True	NA	NA	False	NA	NA	NA	42740232	42733092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42735135_42735877_42736031_42738228_42738314_42738420_42738586_42739840
WTC11_00003992	chr1	-	5320	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	-92	-3642	4	1740	multi-exon	FALSE	canonical	3	17	junction_2	2.94392028877595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAAGGTTTGCTGGTTGT	-42739585	True	NA	-4	True	AATAAA	-15	NA	42740232	42731352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
WTC11_00003993	chr1	-	2671	15	FSM	ENSG00000117385.16	ENST00000397054.7	2705	15	10	24	10	15	multi-exon	FALSE	canonical	3	131	junction_1	87.0326000380763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGAAATTTGCCCATTC	-42767061	False	NA	-6	True	AATAAA	-35	NA	42767074	42746358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747252_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
WTC11_00003994	chr1	-	2726	14	FSM	ENSG00000117385.16	ENST00000460031.5	2726	14	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	32.05191794241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761738	True	NA	-21	True	AATAAA	-20	NA	42766989	42746373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
WTC11_00003995	chr1	-	2591	15	FSM	ENSG00000117385.16	ENST00000296388.10	2591	15	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_8	39.6371295733726	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761777	True	NA	-21	True	AATAAA	-20	NA	42767028	42746373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
WTC11_00003996	chr1	-	2994	14	FSM	ENSG00000117385.16	ENST00000236040.8	2993	14	0	-1	0	0	multi-exon	FALSE	canonical	3	349	junction_7	39.2788543922409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761761	True	NA	-21	True	AATAAA	-20	NA	42767012	42746373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
WTC11_00003997	chr1	-	2813	15	FSM	ENSG00000117385.16	ENST00000495874.5	2813	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	156.138887023113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTGTTCAGACAAT	-42761771	True	NA	-22	True	AATAAA	-19	NA	42767022	42746374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42756400_42756456_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
WTC11_00004002	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	23	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812249	True	NA	-35	True	AATAAA	-17	NA	42817397	42807051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42807501_42816430_42816581_42817189
WTC11_00004003	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	269	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-42812104	True	NA	NA	False	NA	NA	NA	42817252	42813409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42813905_42816430_42816581_42817189
WTC11_00004004	chr1	-	638	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	6	2	0	1	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTCTCGGGTATTCT	-42846079	True	NA	NA	False	AATAAA	-19	NA	42846414	42841896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
WTC11_00004005	chr1	-	552	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	-16	0	13	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTTATAGCAACAGAA	-42846052	True	NA	NA	False	AATAAA	-34	NA	42846387	42841881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
WTC11_00004006	chr1	-	3410	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	-26	0	26	multi-exon	TRUE	canonical	3	759	junction_7	95.8297100764337	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCAGGCTTTTTTCTCC	-42913904	True	NA	30	True	NA	NA	NA	42958868	42925326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
WTC11_00004008	chr1	-	2665	9	FSM	ENSG00000117394.24	ENST00000675112.1	2652	9	0	-13	0	0	multi-exon	FALSE	canonical	3	759	junction_6	101.032095766642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGAAATGCTTGT	-42958653	False	NA	-10	True	TATAAA	-18	NA	42958674	42926155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
WTC11_00004009	chr1	-	2398	9	FSM	ENSG00000117394.24	ENST00000630287.2	2398	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	314.397017121664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGAAATGCTTGT	-42913884	True	NA	-10	True	TATAAA	-18	NA	42958848	42926155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42930625_42930867_42931045_42931207_42943225_42943322_42958633
WTC11_00004010	chr1	-	2888	2	FSM	ENSG00000117394.24	ENST00000674545.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAGTATATCTGGAC	-42929479	False	NA	-20	True	ATTAAA	-11	NA	42929499	42926248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604
WTC11_00004014	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	430.719151715269	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	-43172530	True	NA	2	True	GATAAA	-25	NA	43172570	43164174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
WTC11_00004016	chr1	-	937	6	FSM	ENSG00000117395.13	ENST00000463906.1	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_5	49.389877505416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	-43171081	False	NA	-43	True	NA	NA	NA	43171121	43164345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755
WTC11_00004020	chr1	-	1497	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	-11	0	11	multi-exon	FALSE	canonical	3	70	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTTCTTGAGCTG	-43284346	True	NA	-15	True	AATAAA	-41	NA	43285581	43281865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43283108_43283251_43283369_43285443
WTC11_00004021	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-43284382	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43283108_43283251_43283369_43285552
WTC11_00004022	chr1	-	1851	8	FSM	ENSG00000066322.15	ENST00000470769.5	1215	8	-158	-478	-158	1	multi-exon	FALSE	canonical	3	15	junction_7	65.9532920686593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGTATACGTATGT	-43364944	False	NA	-1	True	ATTAAA	-22	NA	43366745	43363396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43366267
WTC11_00004023	chr1	-	1238	6	NIC	ENSG00000066322.15	novel	1625	8	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	95.564428528611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGTATACGTATGT	-43365792	False	NA	-1	True	ATTAAA	-22	NA	43367593	43363396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
WTC11_00004025	chr1	-	1471	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	-5	0	2	multi-exon	FALSE	canonical	3	183	junction_2	11.141025490483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTATACGTATGTG	-43366210	True	NA	0	True	ATTAAA	-23	NA	43368011	43363395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
WTC11_00004026	chr1	-	1452	7	FSM	ENSG00000066322.15	ENST00000413844.3	1451	7	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_4	77.0449003287477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGTATACGTATGT	NA	False	NA	-1	True	ATTAAA	-22	NA	43368074	43363396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43365185_43365377_43365563_43365624_43367914
WTC11_00004033	chr1	-	1985	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	-17	0	17	multi-exon	FALSE	canonical	3	141	junction_6	35.512517354996	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGACAGTAATTTATG	-43386458	True	NA	6	True	AATAAA	-32	NA	43389800	43383899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
WTC11_00004034	chr1	-	1500	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	-17	0	17	multi-exon	FALSE	canonical	2	11	junction_1	76.9542668321482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGACAGTAATTTATG	-43386466	True	NA	6	True	AATAAA	-32	NA	43389808	43383899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
WTC11_00004035	chr1	-	1186	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	247	-367	0	198	multi-exon	FALSE	canonical	3	34	junction_6	6.94291593155592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGAACTCCCGAGACT	-43453706	False	NA	NA	False	NA	NA	NA	43453716	43450790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
WTC11_00004036	chr1	-	1299	9	FSM	ENSG00000178922.18	ENST00000583037.5	1322	9	37	-14	11	0	multi-exon	FALSE	canonical	3	8	junction_6	16.814707104199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGACGGTGGCCACA	-43453942	False	NA	NA	False	ATTAAA	-30	NA	43453952	43450988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
WTC11_00004037	chr1	-	1026	9	FSM	ENSG00000178922.18	ENST00000372434.5	1025	9	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_6	17.3092280301578	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	-43453815	False	375	-3	True	ATTAAA	-20	NA	43453825	43451152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
WTC11_00004042	chr1	-	930	3	FSM	ENSG00000196517.13	ENST00000489764.1	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGCGAAGGTTTTGCTGT	-44031418	False	NA	NA	False	NA	NA	NA	44031429	44010191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44010883_44024247_44024363_44031305
WTC11_00004043	chr1	-	371	1	FSM	ENSG00000233514.1	ENST00000402743.2	360	1	-2	-9	-2	9	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTACTGTTTCAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	44122514	44122143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44122100_44122500
WTC11_00004045	chr1	-	1714	10	NNC	ENSG00000117419.16	novel	1417	10	NA	NA	0	54341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.200944773226	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACATAGACATGAAAG	-44347546	True	NA	NA	False	NA	NA	NA	44355238	44166728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44166754_44221094_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
WTC11_00004046	chr1	-	1755	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	-22	0	22	multi-exon	FALSE	canonical	3	330	junction_8	337.182813915538	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCAAAGCTGTCAGGAT	-44347565	True	NA	17	True	NA	NA	NA	44355257	44221047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
WTC11_00004047	chr1	-	1150	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-38	22	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_6	469.121584692593	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCAAAGCTGTCAGGAT	-44347606	True	NA	17	True	NA	NA	NA	44355298	44221047	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44352849_44352926_44355259
WTC11_00004048	chr1	-	1442	7	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	-38	22	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	396.102434843424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCAAAGCTGTCAGGAT	-44347606	True	NA	17	True	NA	NA	NA	44355298	44221047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
WTC11_00004049	chr1	-	974	6	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-38	22	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	511.325571431744	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCAAAGCTGTCAGGAT	-44347606	True	NA	17	True	NA	NA	NA	44355298	44221047	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
WTC11_00004055	chr1	-	2212	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	22	2	0	-2	multi-exon	FALSE	canonical	3	61	junction_1	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTACCGTGGTGATCACG	-44673262	True	NA	NA	False	AATAAA	-15	NA	44674459	44653248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44655210_44660173_44660296_44674330
WTC11_00004056	chr1	-	2106	3	FSM	ENSG00000126106.14	ENST00000372235.7	890	3	1	-1217	0	-1	multi-exon	FALSE	canonical	3	32	junction_1	40.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACCGTGGTGATCACGG	-44673245	True	NA	NA	False	AATAAA	-16	NA	44674442	44653247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44655120_44660173_44660296_44674330
WTC11_00004058	chr1	-	501	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	-62	-54	-62	54	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGCTGGGCATGGCA	-44780501	False	NA	NA	False	AATAAA	-22	NA	44780777	44780276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44780300_44780800
WTC11_00004060	chr1	-	1106	2	ISM	ENSG00000142959.5	ENST00000372207.4	2512	9	3335	0	3335	0	3prime_fragment	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTTAGTTTTTGTTT	-44784559	True	NA	-9	True	AATATA	-18	NA	44784835	44783584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_44784484_44784628
WTC11_00004061	chr1	-	1895	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	5	0	-5	multi-exon	FALSE	canonical	3	262	junction_2	64.0273701805049	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGCCACGCCTGAGCA	-44980781	True	NA	NA	False	NA	NA	NA	44986595	44850526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
WTC11_00004062	chr1	-	1867	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	51	5	51	-5	multi-exon	FALSE	canonical	2	8	junction_1	127.266020602516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGCCACGCCTGAGCA	-44980857	True	NA	NA	False	NA	NA	NA	44986671	44850526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
WTC11_00004063	chr1	-	1467	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	-10	0	10	multi-exon	FALSE	canonical	3	383	junction_4	22.4785219847143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACTAGGAAATTTATTC	-44980773	True	NA	5	True	AATAAA	-31	NA	44986587	44874516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
WTC11_00004066	chr1	-	3605	21	FSM	ENSG00000126107.15	ENST00000372172.5	3597	21	0	-8	0	0	multi-exon	FALSE	canonical	3	172	junction_12	16.4669365699878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTTATTGGGCCCT	-45008782	True	NA	1	True	AATAAA	-21	NA	45011324	45002539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
WTC11_00004067	chr1	-	812	6	FSM	ENSG00000126107.15	ENST00000486296.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	12.7279220613579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTGGAGGGAGGCC	-45003682	False	NA	NA	False	NA	NA	NA	45006224	45003854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996
WTC11_00004069	chr1	-	593	3	FSM	ENSG00000126107.15	ENST00000487488.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	13.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCCCTAAAATCCTGAC	-45004425	False	NA	NA	False	NA	NA	NA	45006967	45005644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45006117_45006691_45006796_45006950
WTC11_00004070	chr1	-	508	4	FSM	ENSG00000132781.20	ENST00000485271.5	507	4	0	-1	0	1	multi-exon	FALSE	canonical	1	15	junction_2	27.6043474836845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45331225	False	NA	-1	True	AGTAAA	-21	NA	45331270	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45329888_45330069_45330515_45330558_45331181
WTC11_00004071	chr1	-	1745	16	FSM	ENSG00000132781.20	ENST00000354383.10	1744	16	0	-1	0	1	multi-exon	FALSE	canonical	1	27	junction_14	74.4301611504966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45340035	False	NA	-1	True	AGTAAA	-21	NA	45340080	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333565_45334390_45334512_45339975
WTC11_00004073	chr1	-	1777	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	-1	0	1	multi-exon	FALSE	canonical	1	75	junction_2	59.454184041159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45340070	False	NA	-1	True	AGTAAA	-21	NA	45340115	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
WTC11_00004074	chr1	-	1743	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	-1	0	1	multi-exon	FALSE	canonical	1	37	junction_14	73.0286397396407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45339294	True	NA	-1	True	AGTAAA	-21	NA	45340388	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
WTC11_00004075	chr1	-	1810	16	FSM	ENSG00000132781.20	ENST00000372110.7	1809	16	0	-1	0	1	multi-exon	FALSE	canonical	1	27	junction_14	74.520869560144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45339294	True	NA	-1	True	AGTAAA	-21	NA	45340388	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333565_45334390_45334512_45340218
WTC11_00004076	chr1	-	1892	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	-1	0	1	multi-exon	TRUE	canonical	1	15	junction_14	76.3806258157132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-45340395	False	NA	-1	True	AGTAAA	-21	NA	45340440	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
WTC11_00004077	chr1	-	1889	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	-1	0	1	multi-exon	FALSE	canonical	1	75	junction_2	59.5790418034918	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	NA	False	NA	-1	True	AGTAAA	-21	NA	45340470	45329240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
WTC11_00004093	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	7.78716893357271	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-45490351	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
WTC11_00004096	chr1	-	2053	6	FSM	ENSG00000280670.3	ENST00000626657.2	1526	6	0	-527	0	1	multi-exon	FALSE	canonical	1	2	junction_2	4.45421149026402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGATCCTTTTCACTA	-45499854	True	NA	61	True	ATTAAA	-19	NA	45499974	45493864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45495167_45495417_45495474_45496555_45496624_45497298_45497384_45499344_45499444_45499531
WTC11_00004097	chr1	-	1003	7	NNC	ENSG00000117450.15	novel	945	6	NA	NA	0	15260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2685.66701832773	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGAGACCAGAGTCCTA	-45293119	True	NA	NA	False	AAAAAG	-2	NA	45521884	45495653	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_45495685_45511023_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
WTC11_00004098	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_5	2737.19976618441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45293173	True	NA	NA	False	NA	NA	NA	45521938	45510913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
WTC11_00004099	chr1	-	3177	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	-112	-1769	-112	1769	multi-exon	FALSE	canonical	3	601	junction_5	2674.48429421449	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGGGGCGGGTGTG	-45523124	False	NA	NA	False	GGGGCT	-33	NA	45523159	45509144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
WTC11_00004100	chr1	-	960	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	-15	0	0	multi-exon	FALSE	canonical	3	6804	junction_5	235.885056754344	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	-45293119	True	NA	-14	True	ATTAAA	-28	NA	45521884	45511035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
WTC11_00004101	chr1	-	3675	5	FSM	ENSG00000159592.11	ENST00000479235.5	3121	5	-545	-9	-545	9	multi-exon	FALSE	canonical	3	603	junction_3	98.8670192733654	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGAAACTGTTTTTT	-45636259	False	NA	-8	True	AATAAA	-36	NA	45636269	45627294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095
WTC11_00004102	chr1	-	3659	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	-18	0	18	multi-exon	FALSE	canonical	3	318	junction_12	149.150068908987	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTTTAGTGCCCAT	-45678241	True	NA	1	True	AATAAA	-45	NA	45686533	45627285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
WTC11_00004104	chr1	-	3624	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGAAACTGTTTTTT	-45687115	False	NA	-8	True	AATAAA	-36	NA	45687133	45627294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
WTC11_00004105	chr1	-	592	2	FSM	ENSG00000159592.11	ENST00000467032.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAGGAGACACTGGTC	-45629699	False	NA	NA	False	NA	NA	NA	45629715	45627956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575
WTC11_00004111	chr1	-	995	3	FSM	ENSG00000159592.11	ENST00000488278.5	995	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCTTTTCCCCTTTCC	-45687115	False	NA	NA	False	TTTAAA	-34	NA	45687133	45660416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45661226_45685575_45685621_45686992
WTC11_00004116	chr1	-	5173	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_10	16.004999218994	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTGTCTTCATGCT	-46132994	False	NA	NA	False	AATAAA	-16	NA	46133036	46040142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
WTC11_00004119	chr1	-	2725	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	-6	0	6	multi-exon	FALSE	canonical	3	357	junction_1	36.6534298927467	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGATTGTGATTTTGTGT	-46195329	True	NA	-5	True	ATTAAA	-26	NA	46198434	46188676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
WTC11_00004120	chr1	-	483	4	FSM	ENSG00000085998.15	ENST00000480972.1	483	4	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	27.6325090347503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATTGTTTCGGAAGAAG	-46187867	False	NA	NA	False	NA	NA	NA	46190972	46189518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46189568_46189853_46189990_46190472_46190518_46190719
WTC11_00004122	chr1	-	770	3	ISM	ENSG00000085998.15	ENST00000693365.1	6035	9	3760	3147	-851	-1767	internal_fragment	FALSE	canonical	3	360	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTGGTGGCACTGTT	-46191546	False	NA	NA	False	NA	NA	NA	46194651	46193382	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_46193926_46194273_46194402_46194552
WTC11_00004125	chr1	-	4458	8	FSM	ENSG00000132128.18	ENST00000472710.2	4455	8	0	-3	0	0	multi-exon	FALSE	canonical	3	377	junction_6	30.4604125824631	4218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGCCCTTCTTGATGAT	-46299837	False	NA	-24	True	AATAAA	-16	NA	46299890	46278400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46279085_46279181_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283
WTC11_00004126	chr1	-	952	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	228.958996814325	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46303536	False	NA	3	True	AATAAA	-22	NA	46303589	46296741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_46297070_46297562_46297634_46298283_46298371_46303123
WTC11_00004127	chr1	-	2648	13	FSM	ENSG00000079277.22	ENST00000371945.10	2661	13	13	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	38.1454635427188	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-46602471	True	NA	0	True	AATAAA	-24	NA	46604255	46557406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
WTC11_00004129	chr1	-	2776	14	FSM	ENSG00000079277.22	ENST00000649800.1	2809	14	34	-1	-5	0	multi-exon	FALSE	canonical	2	3	junction_6	54.5422044934555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-46602476	True	NA	0	True	AATAAA	-24	NA	46604260	46557406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46571416_46571540_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
WTC11_00004131	chr1	-	529	2	FSM	ENSG00000079277.22	ENST00000530528.1	553	2	23	1	23	-1	multi-exon	FALSE	canonical	3	94	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACTCCAGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	46563012	46561477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46561643_46562648
WTC11_00004136	chr1	-	506	4	ISM	ENSG00000079277.22	ENST00000528077.6	1557	11	31	22052	9	-5	5prime_fragment	FALSE	canonical	3	127	junction_3	27.9324582201822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGGGACTCTGAAGC	-46602453	True	NA	-5	True	AATAAA	-14	NA	46604237	46580444	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604184
WTC11_00004147	chr1	-	6346	11	FSM	ENSG00000159658.15	ENST00000674268.1	6346	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	81.4474677322751	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTAAATGACTATACATA	-46715637	True	NA	NA	False	NA	NA	NA	46719139	46674658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716290_46716444_46717902
WTC11_00004148	chr1	-	5817	11	FSM	ENSG00000159658.15	ENST00000371933.8	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	42.4268782730948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-46715612	True	NA	-2	True	AATAAA	-22	NA	46719114	46675158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
WTC11_00004150	chr1	-	5641	10	FSM	ENSG00000159658.15	ENST00000674435.1	5641	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	56.2753372290821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATGTGTCTGACTAAA	-46715634	True	NA	-8	True	AATAAA	-16	NA	46719136	46675164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
WTC11_00004153	chr1	-	4965	17	NIC	ENSG00000123473.17	novel	5019	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_3	22.1666275062311	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-47311496	True	NA	0	True	AATAAA	-22	NA	47314147	47250138	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263063_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00004154	chr1	-	5027	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	-8	0	8	multi-exon	TRUE	canonical	3	32	junction_3	21.8059624873565	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTATAGTTTATTCTCC	-47311496	True	NA	8	True	AATAAA	-30	NA	47314147	47250130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00004155	chr1	-	5015	17	NIC	ENSG00000123473.17	novel	5225	18	NA	NA	0	-1	intron_retention	FALSE	canonical	3	50	junction_3	18.8111502838077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-47311496	True	NA	-1	True	AATAAA	-21	NA	47314147	47250139	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00004156	chr1	-	5334	19	FSM	ENSG00000123473.17	ENST00000337817.10	5351	19	17	0	17	0	multi-exon	FALSE	canonical	1	2	junction_18	31.8158765398661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTTAATAAAATGTCTA	-47314865	False	NA	-34	True	TATAAA	-38	NA	47314875	47250172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035_47314564_47314801
WTC11_00004157	chr1	-	3805	10	FSM	ENSG00000123473.17	ENST00000683977.1	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.4308144553659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTATTGAGTATGAG	NA	False	NA	-104	True	NA	NA	NA	47295848	47250242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764
WTC11_00004161	chr1	-	3254	1	FSM	ENSG00000237424.1	ENST00000445551.1	2509	1	-790	45	-790	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCACCCCCCAGTGAATA	-47435409	False	NA	NA	False	NA	NA	NA	47435431	47432177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47432200_47435400
WTC11_00004162	chr1	-	3515	8	NIC	ENSG00000269113.4	novel	7524	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	8.03309481114831	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-47997215	True	NA	0	True	AATAAA	-18	NA	47997385	47760527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47761281_47765289_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
WTC11_00004163	chr1	-	7809	7	FSM	ENSG00000269113.4	ENST00000606738.3	7524	7	-285	0	-285	0	multi-exon	FALSE	canonical	3	27	junction_4	4.6785562825394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	47997670	47760527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
WTC11_00004166	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.4642247682282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	-48471965	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
WTC11_00004167	chr1	-	276	2	FSM	ENSG00000132122.12	ENST00000487629.1	462	2	0	186	0	-186	multi-exon	FALSE	canonical	3	42	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTCAAGAAAACCACCAAA	NA	False	NA	NA	False	NA	NA	NA	48359722	48355630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48355770_48359585
WTC11_00004169	chr1	-	421	3	FSM	ENSG00000162373.13	ENST00000476079.5	425	3	0	4	0	-1	multi-exon	FALSE	canonical	3	12	junction_2	26	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTTTCGTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	48758933	48727870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48728044_48736238_48736453_48758899
WTC11_00004170	chr1	-	1482	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	-17	0	14	multi-exon	FALSE	canonical	3	9	junction_4	20.8844439715306	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGCATGTGATTTG	-48776915	False	NA	NA	False	AATAAA	-33	NA	48776932	48727852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
WTC11_00004171	chr1	-	1544	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	149	0	-149	multi-exon	FALSE	canonical	3	32	junction_4	13.7025545063685	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGAAAACACTCTTCT	-48776874	False	NA	NA	False	NA	NA	NA	48776891	48727667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
WTC11_00004173	chr1	-	737	7	FSM	ENSG00000185104.21	ENST00000472808.1	759	7	22	0	22	0	multi-exon	FALSE	canonical	1	1	junction_6	123.171966507535	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTACATGTCACAAGG	NA	False	NA	NA	False	AATGAA	-20	NA	50606922	50539591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50606846
WTC11_00004175	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000680483.1	2718	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.25025951018329	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51330462	True	NA	29	True	NA	NA	NA	51330562	51287257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
WTC11_00004181	chr1	-	3422	33	FSM	ENSG00000078618.23	ENST00000539524.5	3417	33	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_20	332.132033233773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-51877986	False	NA	-3	True	AATAAA	-45	NA	51878040	51789190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51877982
WTC11_00004182	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	300.351238071258	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-51878751	False	NA	-3	True	AATAAA	-45	NA	51878805	51789190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
WTC11_00004183	chr1	-	3151	31	FSM	ENSG00000078618.23	ENST00000485608.5	3149	31	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_20	283.948549721404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	NA	False	NA	-22	True	AATAAA	-26	NA	51840454	51789209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51840225
WTC11_00004184	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	202.456700446183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860301	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
WTC11_00004188	chr1	-	5473	2	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	77246	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51913443	False	NA	-4	True	ATTAAA	-17	NA	51913454	51907955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51912579_51912604
WTC11_00004189	chr1	-	4620	2	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	55900	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	NA	False	NA	-4	True	ATTAAA	-17	NA	51934800	51907955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51912551_51934775
WTC11_00004192	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-52032545	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52032100_52033800
WTC11_00004193	chr1	-	607	1	FSM	ENSG00000228407.2	ENST00000414059.2	340	1	-138	-129	-138	129	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTCATGAATCTCTATA	NA	False	NA	NA	False	NA	NA	NA	52160738	52160131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52160100_52160700
WTC11_00004196	chr1	-	3194	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	-115	1	-79	-1	multi-exon	FALSE	canonical	3	36	junction_16	54.8506138867196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTTGTGAAGTTATT	NA	False	NA	-5	True	ATTAAA	-16	NA	52404502	52372831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
WTC11_00004198	chr1	-	5854	30	FSM	ENSG00000134744.14	ENST00000257177.9	5853	30	0	-1	0	1	multi-exon	FALSE	canonical	3	61	junction_5	37.4598635783734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTAATCTGTTGTATAG	-52548803	True	NA	-6	True	AATAAA	-22	NA	52553092	52423273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00004199	chr1	-	5859	30	FSM	ENSG00000134744.14	ENST00000371544.7	5858	30	0	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_5	41.6374991053488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTAATCTGTTGTATAG	-52548811	True	NA	-6	True	AATAAA	-22	NA	52553100	52423273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436976_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00004201	chr1	-	5828	30	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_5	32.6767397736591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	-52548793	True	NA	-7	True	AATAAA	-21	NA	52553082	52423274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00004206	chr1	-	2910	21	FSM	ENSG00000134744.14	ENST00000484723.6	2910	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	63.6306529905202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTTTGGCTGGGACTG	-52553304	True	NA	NA	False	AAAAAG	-38	NA	52553458	52446399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52446443_52446589_52446668_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930_52553091_52553432
WTC11_00004207	chr1	-	4319	16	FSM	ENSG00000134744.14	ENST00000371541.5	4319	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	39.9936661651984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGAATCCAGGTTTG	-52525919	False	NA	NA	False	AAAAAG	-19	NA	52525930	52462177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52463778_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562
WTC11_00004208	chr1	-	4054	17	NIC	ENSG00000134744.14	novel	4319	16	NA	NA	0	-860	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	38.9366472619305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTGTTAATTTTATCA	-52548793	True	NA	NA	False	AATAAA	-13	NA	52553082	52463037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52463778_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00004212	chr1	-	4012	4	NNC	ENSG00000162377.6	novel	3988	3	NA	NA	0	1574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.07627690241	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTAACATGGTAAATTT	-52693866	True	NA	NA	False	NA	NA	NA	52698347	52682874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52682905_52684454_52688169_52692726_52692868_52698220
WTC11_00004213	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	13.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-52693866	True	NA	-14	True	ATTAAA	-8	NA	52698347	52684448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52688169_52692726_52692868_52698220
WTC11_00004216	chr1	-	6103	1	FSM	ENSG00000121310.17	ENST00000539680.1	5817	1	29	-315	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	NA	False	NA	2	True	AATAAA	-38	NA	52902012	52895909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52895900_52902000
WTC11_00004217	chr1	-	1136	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	-10	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.4446661748242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-52920746	True	NA	-9	True	ATTAAA	-15	NA	52921726	52896222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
WTC11_00004219	chr1	-	557	2	FSM	ENSG00000121310.17	ENST00000487040.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAAGTGGAGTGAAGGG	-52911245	False	NA	NA	False	NA	NA	NA	52912225	52911599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52911654_52911722
WTC11_00004222	chr1	-	1009	7	FSM	ENSG00000162384.14	ENST00000470385.5	1009	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	30.259984578097	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGTATCTCCCCA	-53216468	True	NA	82	True	AATGAA	-11	NA	53220592	53214374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260
WTC11_00004225	chr1	-	667	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	-11	0	11	multi-exon	FALSE	canonical	3	1069	junction_2	88.03550420143	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATTACTTTGTAGAA	-53223547	True	NA	-5	True	TATAAA	-20	NA	53238518	53226888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
WTC11_00004226	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	479.704307070744	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	-53223528	True	NA	-42	True	AATAAA	-18	NA	53238499	53226925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
WTC11_00004227	chr1	-	7703	19	FSM	ENSG00000157193.18	ENST00000306052.12	7704	19	0	1	0	-1	multi-exon	FALSE	canonical	3	71	junction_15	99.5779364723871	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTAAGTTTTGTTTCA	-53324828	True	NA	-7	True	ATTAAA	-15	NA	53328070	53242364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
WTC11_00004230	chr1	-	3258	18	FSM	ENSG00000157193.18	ENST00000667377.1	3258	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	110.065724309705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAGATGTTCTTCAT	-53324815	True	NA	-8	True	AATAAA	-18	NA	53328057	53245544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53245982_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
WTC11_00004231	chr1	-	7504	18	FSM	ENSG00000157193.18	ENST00000668448.1	4324	18	0	-3180	0	-1	multi-exon	FALSE	canonical	3	43	junction_4	115.531747909769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTAAGTTTTGTTTCA	-53324854	True	NA	-7	True	ATTAAA	-15	NA	53328096	53242364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
WTC11_00004232	chr1	-	4473	18	FSM	ENSG00000157193.18	ENST00000662198.1	4534	18	62	-1	62	0	multi-exon	FALSE	canonical	3	121	junction_1	75.0584547289483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAGATGTTCTTCAT	-53328384	True	NA	-8	True	AATAAA	-18	NA	53328407	53245544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
WTC11_00004234	chr1	-	3772	17	FSM	ENSG00000157193.18	ENST00000668071.1	3770	17	0	-2	0	0	multi-exon	FALSE	canonical	3	207	junction_13	43.6369521592652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAGATGTTCTTCAT	-53327860	False	NA	-8	True	AATAAA	-18	NA	53327883	53245544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
WTC11_00004247	chr1	-	867	3	NNC	ENSG00000157193.18	novel	899	3	NA	NA	3	-1	intron_retention	FALSE	canonical	2	4	junction_1	161.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGCTCACTCATTTATC	-53327998	False	NA	1	True	AATAAA	-17	NA	53328021	53291789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_53292304_53326872_53326993_53327788
WTC11_00004249	chr1	-	4570	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	-18	0	18	multi-exon	FALSE	canonical	3	503	junction_9	46.8326180951595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTTTATAAGGTCA	-53832168	True	NA	-4	True	AATAAA	-36	NA	53838296	53765459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
WTC11_00004250	chr1	-	784	5	FSM	ENSG00000058804.12	ENST00000480952.1	785	5	0	1	0	-1	multi-exon	FALSE	canonical	3	27	junction_4	246.122301915125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTTCTGCTTTTTG	-53838436	False	NA	NA	False	NA	NA	NA	53838463	53818970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
WTC11_00004251	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	85.1964788004763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887540	True	NA	-18	True	AATAAA	-27	NA	53889733	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
WTC11_00004254	chr1	-	1835	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	-14	0	0	multi-exon	FALSE	canonical	3	92	junction_10	84.8070751765441	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887604	True	NA	-18	True	AATAAA	-27	NA	53889797	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
WTC11_00004255	chr1	-	1425	9	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	95.5664036154966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887578	True	NA	-18	True	AATAAA	-27	NA	53889771	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
WTC11_00004259	chr1	-	883	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	11	0	-11	multi-exon	FALSE	canonical	2	9	junction_1	254.452667504194	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGAGCATTTTCTTT	-53941085	True	NA	NA	False	AATAAA	-4	NA	53945572	53916584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
WTC11_00004260	chr1	-	689	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	-4	0	4	multi-exon	FALSE	canonical	3	526	junction_5	57.4372701301167	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTTTTTATTTACATT	-53941212	True	NA	-4	True	ATTAAA	-19	NA	53945699	53921556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
WTC11_00004262	chr1	-	762	2	FSM	ENSG00000081870.12	ENST00000371376.1	765	2	3	0	3	0	multi-exon	FALSE	canonical	3	662	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATCATGGCGGGAAACA	-53940084	False	4487	NA	False	GATAAA	-11	NA	53940097	53929496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53930146_53939984
WTC11_00004264	chr1	-	6472	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	-15	0	15	multi-exon	FALSE	canonical	3	534	junction_7	150.681174426438	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTACTTAGGTAATTCA	-54042448	False	10756	4	True	AATAAA	-43	NA	54053204	54026665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
WTC11_00004266	chr1	-	1359	8	NNC	ENSG00000116209.12	novel	6457	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	217	junction_3	248.083922600924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACTGTATTTGCTATA	-54042685	True	NA	-19	True	AATAAA	-15	NA	54053441	54032018	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54032306_54036609_54036719_54040755_54040841_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
WTC11_00004267	chr1	-	1755	1	FSM	ENSG00000280378.1	ENST00000624679.1	1755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	-54034849	False	NA	NA	False	AAAAAG	-5	NA	54034880	54033125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54033100_54034900
WTC11_00004271	chr1	-	6193	8	FSM	ENSG00000215883.11	ENST00000534324.6	6193	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.4605499927752	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCTTGTTCAATG	-54198577	True	NA	-3	True	ATTAAA	-15	NA	54200030	54169650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
WTC11_00004272	chr1	-	3339	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.6940493495531	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAACCTTATGTGGTGGT	-54198557	True	NA	NA	False	NA	NA	NA	54200010	54172335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
WTC11_00004274	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	47.7229962910964	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54405995	False	NA	-11	True	ATTAAA	-19	NA	54406008	54225432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
WTC11_00004280	chr1	-	2383	3	NNC	ENSG00000162396.6	novel	2356	2	NA	NA	0	60238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAATTGTGATGCAT	-54762682	True	NA	NA	False	NA	NA	NA	54764523	54696659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54696690_54756900_54759191_54764460
WTC11_00004281	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-54762682	True	NA	-5	True	AATAAA	-16	NA	54764523	54756897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54759191_54764460
WTC11_00004282	chr1	-	4264	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	0	27749	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATCTAAATTAGAAATGA	-54836639	True	NA	NA	False	AAAAAG	-9	NA	54887195	54821877	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821915_54849632_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00004283	chr1	-	4265	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	0	27749	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATCTAAATTAGAAATGA	-54836639	True	NA	NA	False	AAAAAG	-9	NA	54887195	54821877	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821916_54849632_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00004284	chr1	-	4232	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	1	0	-1	multi-exon	FALSE	canonical	3	2014	junction_3	139.13010996905	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGTCGTTTCTTGCTTG	-54836639	True	NA	-8	True	AATAAA	-18	NA	54887195	54849627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00004290	chr1	-	614	6	FSM	ENSG00000162402.14	ENST00000484447.5	614	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	77.7184662741102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTAAGTGTCAGTTAA	NA	False	NA	-3	True	AATAAA	-31	NA	55075499	55071272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_55071491_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456
WTC11_00004292	chr1	-	3489	6	FSM	ENSG00000162407.9	ENST00000371250.4	3273	6	-204	-12	-204	12	multi-exon	FALSE	canonical	3	111	junction_5	12.3060960503321	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGAGTGTTTGAGAG	NA	False	NA	0	True	AATAAA	-31	NA	56579767	56494748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56496677_56511975_56512153_56523822_56523881_56524276_56524555_56536954_56537113_56578877
WTC11_00004294	chr1	-	5301	15	FSM	ENSG00000173406.16	ENST00000371236.7	5301	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	27.1639955282949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	-57422479	True	NA	1	True	AATAAA	-18	NA	57424060	56994777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57069359_57069426_57071022_57071062_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
WTC11_00004295	chr1	-	3698	12	NNC	ENSG00000173406.16	novel	1817	14	NA	NA	-356	-1385	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	31.0954276355015	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTTGAAAAATGATTGT	-57424267	True	NA	NA	False	AATAGA	-21	NA	57424416	56996166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57033522_57033574_57062883_57062944_57136542_57136642_57145289_57145430_57290963_57291167_57424193
WTC11_00004296	chr1	-	5063	14	FSM	ENSG00000173406.16	ENST00000420954.6	1817	14	1	-3247	0	0	multi-exon	TRUE	canonical	3	23	junction_6	24.3694444435077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	NA	False	NA	1	True	AATAAA	-18	NA	57291065	56994777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57033385_57033434_57033522_57033574_57062883_57062944_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963
WTC11_00004299	chr1	-	440	2	Genic_Genomic	ENSG00000223416.3	novel	348	1	NA	NA	0	55569	multi-exon	FALSE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAAGAGGAGAAGAGA	NA	False	NA	NA	False	AAAAAG	-1	NA	58056480	58000563	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_58000590_58056066
WTC11_00004302	chr1	-	348	1	FSM	ENSG00000223416.3	ENST00000488067.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	58056480	58056132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58056100_58056500
WTC11_00004304	chr1	-	1893	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	-32	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	52.1019133525824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545529	True	NA	1	True	AATAAA	-19	NA	58546758	58480718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
WTC11_00004305	chr1	-	1932	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	37.2323783822629	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545529	True	NA	1	True	AATAAA	-19	NA	58546758	58480718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
WTC11_00004306	chr1	-	1709	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	62.0134942523622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTCTTCTACTTGCT	-58545497	True	NA	-1	True	AATAAA	-17	NA	58546726	58480720	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
WTC11_00004311	chr1	-	1844	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	-92	68	-92	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGATAATGTTGCT	-58577260	True	NA	-74	True	NA	NA	NA	58577344	58575500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58575500_58577300
WTC11_00004312	chr1	-	793	1	FSM	ENSG00000185839.3	ENST00000427762.1	690	1	-25	-78	-25	78	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGGTGGTCAGGGTGAG	NA	False	NA	NA	False	NA	NA	NA	58631555	58630762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58630800_58631600
WTC11_00004313	chr1	-	7209	7	ISM	ENSG00000162601.11	ENST00000493821.6	7794	16	19801	-1	-1378	1	intron_retention	FALSE	canonical	3	174	junction_6	33.2101891995012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGATTATTTCTAAAT	-58669832	False	NA	-16	True	AATAAA	-20	NA	58669861	58654737	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631
WTC11_00004317	chr1	-	7774	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	-23	0	19	multi-exon	TRUE	canonical	3	142	junction_7	38.7825816915182	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTAGCAATATACACAT	-58689703	True	NA	2	True	AATAAA	-38	NA	58700062	58654719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
WTC11_00004318	chr1	-	7839	21	NIC	ENSG00000162601.11	novel	7751	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	63.7255050980375	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGATTATTTCTAAA	-58689713	True	NA	-17	True	AATAAA	-19	NA	58700072	58654738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58689293_58689368_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
WTC11_00004319	chr1	-	7839	20	FSM	ENSG00000162601.11	ENST00000665648.1	7192	20	0	-647	0	0	multi-exon	FALSE	canonical	3	39	junction_7	61.6279157525224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGATCATTTGG	-58689713	True	NA	-29	True	AATAAA	-7	NA	58700072	58654750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668429_58668567_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
WTC11_00004325	chr1	-	3271	1	FSM	ENSG00000177606.8	ENST00000371222.4	3257	1	0	-14	0	14	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCCCTTTACTACTTT	-58778921	True	NA	2	True	AATAAA	-31	NA	58784047	58780776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58780800_58784000
WTC11_00004328	chr1	-	744	2	FSM	ENSG00000162604.12	ENST00000472357.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	61683857	61681047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_61681351_61683416
WTC11_00004329	chr1	-	970	7	NNC	ENSG00000162604.12	novel	1250	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	269	junction_6	20.9238035632998	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	-61721205	True	NA	-6	True	AATAAA	-16	NA	61725144	61681047	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723783_61724952
WTC11_00004330	chr1	-	921	8	FSM	ENSG00000162604.12	ENST00000488206.5	921	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	132.600828020932	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTGTTGAGTTAA	-61721174	True	NA	NA	False	NA	NA	NA	61725113	61681244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724287_61724426_61724901
WTC11_00004331	chr1	-	531	4	FSM	ENSG00000162604.12	ENST00000472989.5	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	20.1714870272097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTTAGTCCACGCT	-61709407	True	NA	NA	False	TATAAA	-44	NA	61709418	61683271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_61683547_61694696_61694771_61700933_61701026_61709328
WTC11_00004335	chr1	-	755	1	FSM	ENSG00000237227.1	ENST00000450606.1	307	1	-5	-443	-5	443	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTACTATTACATTTATA	-62208422	False	NA	NA	False	AAGAAA	-32	NA	62208447	62207692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62207700_62208400
WTC11_00004336	chr1	-	8770	50	FSM	ENSG00000116641.18	ENST00000251157.10	7084	50	-135	-1551	-13	1123	multi-exon	TRUE	canonical	3	24	junction_7	23.4451161094961	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACATTTTTCAGA	-62686243	True	NA	NA	False	NA	NA	NA	62688399	62453174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477826_62487397_62487413_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
WTC11_00004337	chr1	-	7233	50	FSM	ENSG00000116641.18	ENST00000635253.2	7233	50	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	26.5049483407773	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAGTAGTAAGAACTTCA	-62686230	True	NA	NA	False	ATTAAA	-15	NA	62688386	62454725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477826_62487397_62487413_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513443_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
WTC11_00004338	chr1	-	6985	49	FSM	ENSG00000116641.18	ENST00000454575.6	6985	49	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_27	19.7515712279358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGAACTTTACTTAGTA	-62688234	False	NA	NA	False	AAAACA	-12	NA	62688275	62454829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477835_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
WTC11_00004346	chr1	-	676	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	-86	-468	0	468	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTCTTTTTAGTTTG	-62686212	True	NA	NA	False	ATTAAA	-39	NA	62688368	62687122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62687657_62688226
WTC11_00004348	chr1	-	879	5	NNC	ENSG00000230798.6	novel	1019	4	NA	NA	17	36559	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	680.645052505342	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACAGCCGTGTAACCA	-63319573	True	NA	NA	False	AAAAAG	-9	NA	63322436	63284318	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63284353_63320883_63321191_63321366_63321464_63321624_63321945_63322315
WTC11_00004349	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63321514	False	NA	-43	True	AATAAA	-24	NA	63321529	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366
WTC11_00004350	chr1	-	1175	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	66	6	18	0	multi-exon	FALSE	canonical	0	0	junction_1	414	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319572	True	NA	-43	True	AATAAA	-24	NA	63322435	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664
WTC11_00004351	chr1	-	886	4	NIC	ENSG00000230798.6	novel	837	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	782.643384094357	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321366_63321464_63321583_63321945_63322315
WTC11_00004352	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	379.945025263159	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
WTC11_00004353	chr1	-	879	4	NIC	ENSG00000230798.6	novel	837	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	92.2942155404239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321366_63321464_63321590_63321945_63322315
WTC11_00004354	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	277	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319595	True	NA	-43	True	AATAAA	-24	NA	63322458	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63322315
WTC11_00004355	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	31	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63323567	False	NA	-43	True	AATAAA	-24	NA	63323582	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63323490
WTC11_00004356	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63324426	False	NA	-43	True	AATAAA	-24	NA	63324441	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63324354
WTC11_00004358	chr1	-	718	7	NIC	ENSG00000142856.17	novel	961	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	182.586965580788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518853	True	NA	-10	True	AATAAA	-19	NA	63523188	63440769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
WTC11_00004359	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	77.2551575948169	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518890	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
WTC11_00004360	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.667528682594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	-63518859	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
WTC11_00004361	chr1	-	1282	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	3	0	3	0	multi-exon	FALSE	canonical	3	76	junction_3	183.361883298884	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523499	63440772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
WTC11_00004362	chr1	-	1337	8	NIC	ENSG00000142856.17	novel	945	6	NA	NA	0	291	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	177.928901186825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATTTTATTTTCTGTG	-63518847	True	NA	NA	False	AATAAA	-31	NA	63523182	63449011	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63449816_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
WTC11_00004363	chr1	-	931	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	-27	-31	0	31	multi-exon	FALSE	canonical	3	20	junction_1	182.970723653501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTTTCCTACCTCTTT	-63518874	True	NA	NA	False	NA	NA	NA	63523209	63451693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
WTC11_00004366	chr1	-	5098	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	-6	0	6	multi-exon	FALSE	canonical	3	129	junction_7	12.7243751210903	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCTTTTAATATTAAGA	-64964783	True	NA	1	True	AATAAA	-23	NA	64966549	64833222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
WTC11_00004368	chr1	-	1194	8	FSM	ENSG00000162434.13	ENST00000672751.1	1263	8	69	0	44	0	multi-exon	FALSE	canonical	0	0	junction_7	52.1684868518166	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAATAAACACAAGAA	-65067534	False	NA	-22	True	AATAAA	-16	NA	65067685	64864927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_65067603
WTC11_00004369	chr1	-	599	1	FSM	ENSG00000199135.1	ENST00000362265.1	75	1	67	-591	67	591	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATTGCTGCTGCTGTC	-65058290	False	NA	NA	False	NA	NA	NA	65058441	65057842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_65057800_65058400
WTC11_00004371	chr1	-	7365	8	FSM	ENSG00000142864.15	ENST00000361219.11	6681	8	-147	-537	-134	537	multi-exon	FALSE	canonical	3	2021	junction_5	918.423449533526	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCCACCGCCTTGAC	-67430523	False	NA	NA	False	NA	NA	NA	67430549	67407272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424978_67425082_67425224_67426134_67426286_67429987
WTC11_00004372	chr1	-	7200	8	FSM	ENSG00000142864.15	ENST00000370994.8	6676	8	13	-537	0	537	multi-exon	FALSE	canonical	3	1979	junction_5	929.55161453339	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCCACCGCCTTGAC	-67331846	True	NA	NA	False	NA	NA	NA	67430402	67407272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424960_67425082_67425224_67426134_67426286_67429987
WTC11_00004373	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1222.76144485358	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	-67331830	True	NA	-32	True	AATAAA	-34	NA	67430386	67411037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
WTC11_00004374	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1230.14789222056	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	-67331816	True	NA	NA	False	AATATA	-24	NA	67430372	67412866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
WTC11_00004379	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	1	-1	1	1	multi-exon	FALSE	canonical	3	26	junction_4	68.5248130241885	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTTGTGTCTCAC	-68497203	True	NA	-8	True	ATTAAA	-18	NA	68497220	68474150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
WTC11_00004380	chr1	-	2658	4	FSM	ENSG00000024526.17	ENST00000488146.5	2658	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	25.2498624858742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCTCAATGTAATTT	-68482221	False	NA	0	True	AATAAA	-23	NA	68482238	68475573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439
WTC11_00004381	chr1	-	582	5	FSM	ENSG00000024526.17	ENST00000525124.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	98.2200972306585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAAGTTAAATATATG	-68491496	True	NA	NA	False	NA	NA	NA	68497082	68486940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
WTC11_00004383	chr1	-	2960	16	NNC	ENSG00000066557.6	novel	2843	15	NA	NA	-93	62023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.1804368321324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGGTATCAAGATTGA	-70199849	True	NA	NA	False	NA	NA	NA	70205672	70082781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_70082813_70144811_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
WTC11_00004384	chr1	-	2896	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	-53	0	53	multi-exon	FALSE	canonical	3	290	junction_10	38.9408892700572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTACGCCTGTAATC	-70199756	True	NA	NA	False	TTTAAA	-27	NA	70205579	70144751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
WTC11_00004387	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.0749979664876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-70349696	True	NA	NA	False	AATAAA	-20	NA	70354722	70258998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
WTC11_00004389	chr1	-	3083	5	ISM	ENSG00000118454.13	ENST00000262346.6	3327	12	52081	12763	11137	-11726	internal_fragment	FALSE	canonical	3	190	junction_3	17.3547543918086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTGTGTTCCTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	70302653	70273999	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763
WTC11_00004391	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_1	180.313923786021	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-71063490	True	NA	-1	True	AATAAA	-22	NA	71081035	71063290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
WTC11_00004392	chr1	-	3683	2	FSM	ENSG00000132485.14	ENST00000477096.1	3677	2	0	-6	0	0	multi-exon	FALSE	canonical	3	522	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-71067493	False	NA	-1	True	AATAAA	-22	NA	71067513	71063290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71065677
WTC11_00004393	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	202.331015912044	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	-71063466	True	NA	-13	True	AATAAA	-17	NA	71081011	71063336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
WTC11_00004396	chr1	-	482	2	FSM	ENSG00000132485.14	ENST00000473260.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAATAATGTATTA	-71067186	False	NA	6	True	NA	NA	NA	71067206	71065086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71066775
WTC11_00004397	chr1	-	1257	10	FSM	ENSG00000132485.14	ENST00000611683.1	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	174.398507752139	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGCCAACCCCTACG	-71081168	True	NA	NA	False	ACTAAA	-10	NA	71081289	71065718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
WTC11_00004400	chr1	-	3180	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	-879	0	871	multi-exon	FALSE	canonical	3	58	junction_9	186.153925423606	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACATTGTTTAACTCAG	-74733216	True	NA	-22	True	NA	NA	NA	74733408	74704610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
WTC11_00004404	chr1	-	1708	1	FSM	ENSG00000223905.1	ENST00000394513.2	664	1	111	-1155	111	1155	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACTATCTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	76354135	76352427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_76352400_76354100
WTC11_00004406	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	27.0916961447599	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-77216175	True	NA	-5	True	ATTAAA	-18	NA	77219430	77088988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
WTC11_00004407	chr1	-	4500	11	FSM	ENSG00000036549.13	ENST00000481346.5	4500	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	37.3844887620521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	-77631906	False	NA	-5	True	TATAAA	-19	NA	77631921	77562415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849
WTC11_00004408	chr1	-	8934	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	-73	-2449	-56	2449	multi-exon	FALSE	canonical	0	0	junction_14	61.6852196764396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTTCCATTTATTTT	-77682704	False	NA	0	True	AATAAA	-15	NA	77682731	77559966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
WTC11_00004409	chr1	-	8843	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	0	2449	combination_of_known_junctions	TRUE	canonical	0	0	junction_14	63.2936547743443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTTCCATTTATTTT	-77682616	False	2189	0	True	AATAAA	-15	NA	77682643	77559966	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
WTC11_00004410	chr1	-	4544	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	-138	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_8	34.2550458073742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGCTTGTTGTGACT	-77683530	False	NA	NA	False	AATAAA	-27	NA	77683557	77564505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
WTC11_00004411	chr1	-	4280	14	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	63.4133616666852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGAATGCTTGTTGTG	-77681173	True	NA	NA	False	AATAAA	-24	NA	77683362	77564508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641521_77641656_77683261
WTC11_00004419	chr1	-	4464	25	NIC	ENSG00000077254.14	novel	4502	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	87.7589818131961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753945	True	NA	-4	True	AATAAA	-21	NA	77759834	77695986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
WTC11_00004420	chr1	-	4287	24	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	76.9956913335542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753947	True	NA	-4	True	AATAAA	-21	NA	77759836	77695986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
WTC11_00004421	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_11	71.0121265503454	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753963	True	NA	-4	True	AATAAA	-21	NA	77759852	77695986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
WTC11_00004422	chr1	-	4506	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	-4	0	0	multi-exon	FALSE	canonical	3	206	junction_24	83.0687361800789	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753963	True	NA	-4	True	AATAAA	-21	NA	77759852	77695986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
WTC11_00004426	chr1	-	2722	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_8	70.9294543895553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753947	True	NA	NA	False	AATAAA	-15	NA	77759836	77711651	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
WTC11_00004427	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	86.1653475602658	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753963	True	NA	NA	False	AATAAA	-15	NA	77759852	77711651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
WTC11_00004428	chr1	-	2884	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	57	15661	16	0	5prime_fragment	FALSE	canonical	3	206	junction_21	80.261759969357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753906	True	NA	NA	False	AATAAA	-15	NA	77759795	77711651	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
WTC11_00004431	chr1	-	2139	1	FSM	ENSG00000219201.4	ENST00000427577.1	921	1	-128	-1090	-128	1090	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACATT	NA	False	NA	NA	False	AATAAA	-14	NA	77811909	77809770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77809800_77811900
WTC11_00004433	chr1	-	6741	21	NNC	ENSG00000162613.17	novel	6714	20	NA	NA	0	49026	intron_retention	TRUE	non_canonical	0	0	junction_1	194.505629738576	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATAGGCTGGCCATG	-77964775	True	NA	NA	False	NA	NA	NA	77979072	77895028	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77895063_77944058_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
WTC11_00004434	chr1	-	1291	2	FSM	ENSG00000162613.17	ENST00000483894.5	605	2	-681	-5	0	5	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGTGTTTTTTAT	-77946561	False	NA	96	True	AATAAA	-25	NA	77946576	77944049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77944270_77945505
WTC11_00004437	chr1	-	5535	7	NNC	ENSG00000162613.17	novel	6714	20	NA	NA	-2220	0	intron_retention	TRUE	canonical	3	28	junction_3	323.526102330073	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77962944	False	NA	91	True	AATAAA	-20	NA	77963005	77944054	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77948775_77949154_77949301_77955254_77955327_77956571_77956701_77960183_77960264_77960343_77960496_77962769
WTC11_00004438	chr1	-	6719	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	-5	0	5	multi-exon	FALSE	canonical	3	195	junction_16	159.531307984191	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGTGTTTTTTAT	-77964775	True	NA	96	True	AATAAA	-25	NA	77979072	77944049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
WTC11_00004439	chr1	-	6749	20	NIC	ENSG00000162613.17	novel	6714	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	571	junction_16	104.381996091439	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77964813	True	NA	91	True	AATAAA	-20	NA	77979110	77944054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
WTC11_00004442	chr1	-	209	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAAACATGATTTTAG	-78004241	True	NA	NA	False	AATAAA	-31	NA	78004554	78004345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_78004300_78004600
WTC11_00004444	chr1	-	581	2	FSM	ENSG00000288822.1	ENST00000692053.1	576	2	-1	-4	-1	4	multi-exon	FALSE	canonical	3	611	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGGTCTCTTCACAT	-79481579	True	NA	-1	True	AATAAA	-26	NA	79493814	79488639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_79488967_79493560
WTC11_00004449	chr1	-	920	3	FSM	ENSG00000174021.12	ENST00000370641.3	920	3	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_2	33.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTGCATTATTAT	-84506515	False	NA	-15	True	AATAAA	-14	NA	84506565	84498328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84498549_84501825_84501971_84506010
WTC11_00004451	chr1	-	2886	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	6	0	6	0	multi-exon	FALSE	canonical	3	37	junction_4	10.1862652625975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	-84573500	True	NA	2	True	AATAAA	-23	NA	84574474	84553120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
WTC11_00004452	chr1	-	1748	6	FSM	ENSG00000117151.13	ENST00000465118.6	1748	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	18.7978722200147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTAGTGTCTCCCCTTT	-84573456	True	NA	-1	True	AATAAA	-19	NA	84574430	84554537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84573915
WTC11_00004460	chr1	-	2905	3	NIC	ENSG00000171517.6	novel	3515	3	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	40	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTCTTGTTGAGGTG	-84888718	True	NA	-14	True	AATAAA	-14	NA	84893194	84811604	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_84814172_84865384_84865544_84893015
WTC11_00004461	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.40254569624358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-85048124	True	NA	1	True	ATTAAA	-17	NA	85048500	85018081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
WTC11_00004464	chr1	-	8637	7	FSM	ENSG00000097096.9	ENST00000341460.6	5466	7	-717	-2454	-717	2454	multi-exon	FALSE	canonical	3	20	junction_2	7.71902411793961	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCGAGATTGCGCCAC	-85200301	True	NA	NA	False	NA	NA	NA	85201733	85154434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85159250_85164525_85164758_85169043_85169226_85178145_85178273_85182097_85183201_85190056_85190753_85200251
WTC11_00004466	chr1	-	1396	5	Fusion	ENSG00000097096.9_ENSG00000162642.14	novel	3391	4	NA	NA	0	19	multi-exon	FALSE	non_canonical	0	0	junction_1	177.844559939291	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGCTTCCTGAAGCT	-85250196	True	NA	NA	False	NA	NA	NA	85259662	85181139	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_85181170_85251967_85252703_85258523_85258723_85258934_85259062_85259357
WTC11_00004467	chr1	-	2215	4	Fusion	ENSG00000097096.9_ENSG00000142867.14	novel	2833	3	NA	NA	0	19	multi-exon	FALSE	non_canonical	0	0	junction_1	68.7362107383486	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGCTTCCTGAAGCT	-85276432	False	NA	NA	False	NA	NA	NA	85276456	85181139	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_85181170_85266247_85267983_85270617_85270907_85276295
WTC11_00004469	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	123.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250196	True	NA	-3	True	ATTAAA	-16	NA	85259662	85249952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85252703_85258523_85258723_85259357
WTC11_00004470	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	80.7066016850887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250206	True	NA	-3	True	ATTAAA	-16	NA	85259672	85249952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
WTC11_00004471	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-85276608	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85267983_85270617_85270907_85276295
WTC11_00004473	chr1	-	3954	6	FSM	ENSG00000153904.21	ENST00000284031.13	3939	6	0	-15	0	11	multi-exon	FALSE	canonical	3	181	junction_4	12.5219806739988	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTCTTTGCAACAGAAA	-85463021	True	NA	13	True	AATAAA	-35	NA	85465159	85318469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85464742
WTC11_00004474	chr1	-	3872	7	FSM	ENSG00000153904.21	ENST00000426972.8	4022	7	161	-11	161	11	multi-exon	FALSE	canonical	0	0	junction_5	94.3340694906494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTCTTTGCAACAGAAA	-85578102	True	NA	13	True	AATAAA	-35	NA	85578202	85318469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85496165_85496282_85577983
WTC11_00004475	chr1	-	6236	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	-14	-19	-14	19	multi-exon	TRUE	canonical	3	98	junction_2	12.2181811501256	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCCAACCTAATTTTAC	-85703987	True	NA	NA	False	AATAAA	-39	NA	85708447	85649397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
WTC11_00004478	chr1	-	2156	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	-1	0	0	multi-exon	FALSE	canonical	2	4	junction_4	19.992665321729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	-86394980	True	NA	-10	True	AATAAA	-13	NA	86396340	86348736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
WTC11_00004479	chr1	-	7008	2	ISM	ENSG00000122417.15	ENST00000531412.5	534	6	-769	-4098	-769	-23	intron_retention	FALSE	canonical	3	100	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAATAAATTGTCAAA	NA	False	NA	-34	True	NA	NA	NA	86357313	86348760	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_86352985_86354529
WTC11_00004480	chr1	-	4267	18	FSM	ENSG00000122417.15	ENST00000294678.6	4267	18	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	22.2629768541474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGTTAAACCTGATAA	-86394920	True	NA	-16	True	AATAAA	-24	NA	86396280	86350093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86352209_86352858_86352985_86354529_86354693_86354773_86354860_86355344_86355384_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
WTC11_00004483	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	17.4610996217306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	-86394926	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
WTC11_00004484	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-86394963	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86387087_86396032
WTC11_00004485	chr1	-	916	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	-58	103	-58	-103	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCAATATAATGATCTC	NA	False	NA	NA	False	NA	NA	NA	86704520	86703604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86703600_86704500
WTC11_00004487	chr1	-	1790	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	-290	-280	0	0	multi-exon	FALSE	canonical	3	60	junction_1	614.380085036038	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-86914404	False	NA	-5	True	ATTAAA	-21	NA	86914424	86862444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
WTC11_00004490	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	12.2576506721313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-88890585	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
WTC11_00004491	chr1	-	505	3	FSM	ENSG00000137947.12	ENST00000471471.1	516	3	11	0	11	0	multi-exon	FALSE	canonical	3	16	junction_2	61	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTTGGAGATTCTCAGAA	-88891914	False	NA	NA	False	NA	NA	NA	88891933	88864043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88864115_88887260_88887368_88891606
WTC11_00004492	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	20.0499376557634	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88985222	True	NA	0	True	AATAAA	-23	NA	88992776	88935772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
WTC11_00004493	chr1	-	1821	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	-6	0	0	multi-exon	FALSE	canonical	3	76	junction_12	57.794780788498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88985075	True	NA	0	True	AATAAA	-23	NA	88992629	88935772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
WTC11_00004494	chr1	-	1961	15	NIC	ENSG00000137944.18	novel	1815	14	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	78.8278931260622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-88992797	False	NA	-6	True	AATAAA	-17	NA	88992913	88935778	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584_88992749_88992886
WTC11_00004496	chr1	-	4801	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	-2	0	2	multi-exon	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGTAAATACTTTTCTT	-88985218	True	NA	-6	True	ATTAAA	-18	NA	88992772	88979453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88984067_88992584
WTC11_00004497	chr1	-	5084	3	FSM	ENSG00000213516.10	ENST00000399794.6	5084	3	5	-5	5	2	multi-exon	FALSE	canonical	3	42	junction_1	26.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGTAAATACTTTTCTT	NA	False	NA	-6	True	ATTAAA	-18	NA	88992955	88979453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88984067_88988251_88988352_88992584
WTC11_00004498	chr1	-	565	1	FSM	ENSG00000234518.2	ENST00000439531.1	483	1	-18	-64	-18	64	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTCCTGAGTTGATC	NA	False	NA	NA	False	AAGAAA	-30	NA	89104785	89104220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89104200_89104800
WTC11_00004501	chr1	-	2042	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	-6	0	0	multi-exon	FALSE	canonical	3	86	junction_3	84.9012498272094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91021436	False	NA	NA	False	AATAAA	-24	NA	91021457	90915297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
WTC11_00004502	chr1	-	5702	6	FSM	ENSG00000122482.22	ENST00000370440.5	5702	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	66.9256303668482	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91021452	False	2403	NA	False	AATAAA	-24	NA	91021473	90915297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021272
WTC11_00004504	chr1	-	6085	6	NIC	ENSG00000122482.22	novel	5702	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	86.8138237840034	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91019869	True	NA	NA	False	AATAAA	-24	NA	91022272	90915297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021688
WTC11_00004505	chr1	-	2140	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	-887	0	0	multi-exon	FALSE	canonical	3	93	junction_3	83.0675762390009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91019869	True	NA	NA	False	AATAAA	-24	NA	91022272	90915297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
WTC11_00004511	chr1	-	6545	17	FSM	ENSG00000069702.11	ENST00000212355.9	6339	17	-206	0	-206	0	multi-exon	FALSE	canonical	2	7	junction_3	4.06009544222793	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTTGTTATCATTA	NA	False	NA	-2	True	AATAAA	-22	NA	91886357	91680342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720231_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
WTC11_00004513	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_12	42.4179673088808	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-92295723	True	NA	69	True	AATAAA	-19	NA	92298987	92246401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
WTC11_00004517	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-92295723	True	NA	NA	False	NA	NA	NA	92298987	92297520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92298030_92298924
WTC11_00004521	chr1	-	5765	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	24	0	-24	multi-exon	FALSE	canonical	3	238	junction_1	15.121728296285	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAAAGTTATGCAAA	-93176153	True	NA	NA	False	AATATA	-2	NA	93180413	93149765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
WTC11_00004522	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.924563261564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	-93180498	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
WTC11_00004525	chr1	-	384	1	FSM	ENSG00000229567.1	ENST00000423010.1	169	1	95	-310	95	310	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTCTTTAAAAATATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	93279034	93278650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93278600_93279000
WTC11_00004527	chr1	-	5428	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	468	0	-468	multi-exon	FALSE	canonical	3	722	junction_5	80.2650124414257	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGATAAACCAACTGCT	-93868910	True	NA	NA	False	NA	NA	NA	93879206	93866751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
WTC11_00004528	chr1	-	691	4	FSM	ENSG00000067334.14	ENST00000496535.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	70.0539474659034	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATCATCTAAATTAATT	-93863073	False	NA	-16	True	ATTAAA	-18	NA	93873369	93869779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118
WTC11_00004534	chr1	-	2035	11	FSM	ENSG00000137962.13	ENST00000370217.3	2043	11	8	0	8	0	multi-exon	FALSE	canonical	3	31	junction_1	8.72009174263666	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTTATTTTTTTTT	-94236801	True	NA	-75	True	AGTAAA	-20	NA	94237625	94201894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94202733_94202917_94202999_94203099_94203211_94203929_94203995_94205060_94205199_94205634_94205684_94208831_94208905_94209253_94209351_94220257_94220393_94231406_94231644_94237414
WTC11_00004535	chr1	-	2247	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	51	0	-51	multi-exon	FALSE	canonical	3	18	junction_5	7.78203058333749	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTACAACAACGTATCT	-94541251	True	NA	2	True	AGTAAA	-19	NA	94541759	94529223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
WTC11_00004536	chr1	-	2088	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	-215	6	-93	-6	multi-exon	FALSE	canonical	1	5	junction_1	12.1037184369102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTACTTATTCTATCT	-94541344	True	NA	-11	True	AATAAA	-19	NA	94541852	94529315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
WTC11_00004537	chr1	-	1993	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	-2	0	2	multi-exon	FALSE	canonical	3	3021	junction_2	173.54986475234	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCACAGGCTGATTATT	-94908475	True	NA	-4	True	AATAAA	-22	NA	94927110	94896954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
WTC11_00004538	chr1	-	1968	6	FSM	ENSG00000117519.16	ENST00000394202.8	1974	6	0	6	0	2	multi-exon	FALSE	canonical	3	109	junction_3	1246.83641268612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCACAGGCTGATTATT	-94927125	True	NA	-4	True	AATAAA	-22	NA	94927223	94896954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94903121_94903189_94903402_94903525_94926837
WTC11_00004541	chr1	-	9357	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	18	0	-18	multi-exon	FALSE	canonical	3	55	junction_1	10.077477638554	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGCATTTAAACAGAAGT	-95072068	True	NA	NA	False	AATAAA	-2	NA	95072951	94974422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
WTC11_00004542	chr1	-	863	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	-21	-95	-21	95	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTTTAACTCAAAAAAC	NA	False	NA	NA	False	AAAAAG	-4	NA	96679641	96678778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_96678800_96679600
WTC11_00004543	chr1	-	3965	6	FSM	ENSG00000117598.13	ENST00000263177.5	3983	6	0	18	0	-18	multi-exon	FALSE	canonical	2	17	junction_1	6.70522184569608	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAATTGAAAACTGAATT	-99004438	True	NA	-16	True	AATAAA	-10	NA	99004861	98890262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_98893105_98914785_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
WTC11_00004544	chr1	-	577	2	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGGCACAGAGATATGAG	-99511315	False	NA	NA	False	NA	NA	NA	99511331	99510650	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_99510673_99510776
WTC11_00004547	chr1	-	3902	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	-54	0	47	multi-exon	TRUE	canonical	3	62	junction_12	11.5427195668958	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTCCTTGAAGAGCAT	-100131559	True	NA	18	True	NA	NA	NA	100132930	100083515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
WTC11_00004549	chr1	-	10985	12	FSM	ENSG00000137992.15	ENST00000681780.1	1933	12	0	-9052	0	0	multi-exon	FALSE	canonical	2	5	junction_10	27.5101784319072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-100247649	True	NA	-2	True	AATAAA	-20	NA	100249833	100186918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100248898_100249086_100249769
WTC11_00004550	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	8.28009661779378	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-100247650	True	NA	-2	True	AATAAA	-20	NA	100249834	100186918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
WTC11_00004551	chr1	-	7665	2	FSM	ENSG00000224616.4	ENST00000670421.2	7697	2	17	15	1	-5	multi-exon	FALSE	canonical	3	14	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCTAAAGCTTAAAGTAT	-100265836	True	NA	NA	False	NA	NA	NA	100266119	100258368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100265918_100266003
WTC11_00004553	chr1	-	2840	6	NIC	ENSG00000162694.14	novel	902	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	139.140217047409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-100891752	True	NA	-23	True	AATAAA	-19	NA	100894799	100872386	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_100874431_100876793_100876865_100877475_100877904_100878393_100878448_100888752_100888829_100894632
WTC11_00004555	chr1	-	3973	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	-1148	0	-811	0	multi-exon	FALSE	canonical	3	224	junction_4	42.5404219537136	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100895725	True	NA	-27	True	AATAAA	-15	NA	100895990	100872390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
WTC11_00004560	chr1	-	1769	8	FSM	ENSG00000117543.22	ENST00000370109.8	1768	8	0	-1	0	1	multi-exon	FALSE	canonical	3	283	junction_4	24.6857804231918	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTTCTTCTT	-101021478	True	NA	4	True	AATAAA	-24	NA	101025784	100989621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
WTC11_00004561	chr1	-	1144	8	FSM	ENSG00000117543.22	ENST00000342173.11	1143	8	0	-1	0	0	multi-exon	FALSE	canonical	3	35	junction_1	106.869747155792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGGTTTTATAAGTG	-101021457	True	NA	NA	False	NA	NA	NA	101025763	100990222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990629_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
WTC11_00004562	chr1	-	1047	7	FSM	ENSG00000117543.22	ENST00000464270.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	114.499878699596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGGTTTTATAAGTG	-101021509	True	NA	NA	False	NA	NA	NA	101025815	100990222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025682
WTC11_00004566	chr1	-	531	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	-7	0	7	multi-exon	FALSE	canonical	3	325	junction_3	10.4243305140746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTAATTGTATTTTAT	-101021447	True	NA	NA	False	AATAAA	-29	NA	101025753	101013641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
WTC11_00004568	chr1	-	1043	1	FSM	ENSG00000183298.5	ENST00000431241.1	880	1	-80	-83	-80	83	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGGCAATTTTTTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	101787299	101786256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_101786300_101787300
WTC11_00004570	chr1	-	5289	64	FSM	ENSG00000060718.22	ENST00000635193.1	5289	64	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_37	11.9336791649809	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAAGTCCCTTTCTTTG	NA	False	NA	-12	True	AATAAA	-40	NA	103031213	102877484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102979596_102979613_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115
WTC11_00004572	chr1	-	4381	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	-132	0	132	multi-exon	FALSE	canonical	3	306	junction_8	29.8775277870621	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCACCAAAGGAGTAAAA	-108195386	True	NA	NA	False	NA	NA	NA	108200343	108133910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
WTC11_00004574	chr1	-	1963	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	-85	-4	-85	-1	multi-exon	FALSE	canonical	3	21	junction_7	13.6426701557867	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTACCTATTTTTTTTG	NA	False	NA	0	True	AATAAA	-30	NA	108661611	108648290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
WTC11_00004575	chr1	-	6931	14	FSM	ENSG00000121940.17	ENST00000675001.1	6917	14	0	-14	0	0	multi-exon	TRUE	canonical	2	4	junction_8	67.2760804886637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCACATGCTCCTCTT	-108961141	True	NA	NA	False	NA	NA	NA	108963450	108927704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947337_108947509_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
WTC11_00004578	chr1	-	4994	13	FSM	ENSG00000121940.17	ENST00000369969.7	4994	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	48.9268160964244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	-108961175	True	NA	NA	False	AAGAAA	-19	NA	108963484	108929504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
WTC11_00004583	chr1	-	4229	15	FSM	ENSG00000085433.17	ENST00000369962.8	4226	15	0	-3	0	3	multi-exon	TRUE	canonical	3	17	junction_11	5.07746120072797	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTCCTCAGTCTTTG	-109041171	True	NA	0	True	AATAAA	-23	NA	109042102	108970210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004716_109010915_109011719_109013840_109013926_109017517_109017602_109023354_109023522_109041861
WTC11_00004585	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.12825877028341	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-109061673	True	NA	NA	False	NA	NA	NA	109076003	109064139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
WTC11_00004586	chr1	-	335	1	FSM	ENSG00000273382.1	ENST00000608574.1	2888	1	1584	969	1584	-969	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTACTTAAAAAAAAAAAAAG	-109089199	False	NA	NA	False	NA	NA	NA	109089274	109088939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109088900_109089300
WTC11_00004587	chr1	-	1593	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	-9	0	9	multi-exon	FALSE	canonical	3	52	junction_3	167.246610044654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGATCCTGCTCCTATTTC	-109276838	True	NA	-2	True	AATAAA	-36	NA	109283115	109279546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
WTC11_00004588	chr1	-	1739	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	-9	0	9	multi-exon	FALSE	canonical	3	37	junction_7	157.896375215274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGATCCTGCTCCTATTTC	-109276848	True	NA	-2	True	AATAAA	-36	NA	109283125	109279546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
WTC11_00004589	chr1	-	1726	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	-9	0	9	multi-exon	FALSE	canonical	3	130	junction_7	132.053483289838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGATCCTGCTCCTATTTC	-109276870	True	NA	-2	True	AATAAA	-36	NA	109283147	109279546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
WTC11_00004590	chr1	-	1752	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	-10	0	9	multi-exon	FALSE	canonical	3	170	junction_7	121.929052639439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGATCCTGCTCCTATTTC	-109276891	True	NA	-2	True	AATAAA	-36	NA	109283168	109279546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
WTC11_00004591	chr1	-	1834	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	-8	0	0	multi-exon	FALSE	canonical	3	54	junction_6	151.940138066133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-109276909	True	NA	-12	True	AATAAA	-26	NA	109283186	109279556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
WTC11_00004592	chr1	-	1870	5	FSM	ENSG00000134222.16	ENST00000492431.1	1870	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	101.273145502645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276142	False	NA	-22	True	AATAAA	-16	NA	109282419	109279566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618
WTC11_00004593	chr1	-	1603	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	160.201403851272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276863	True	NA	-22	True	AATAAA	-16	NA	109283140	109279566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
WTC11_00004594	chr1	-	1700	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_7	151.835840462585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276868	True	NA	-20	True	AATAAA	-18	NA	109283145	109279564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283073
WTC11_00004595	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	165.841576727395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276845	True	NA	-40	True	NA	NA	NA	109283122	109279584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
WTC11_00004597	chr1	-	2016	7	ISM	ENSG00000134222.16	ENST00000369903.6	1710	8	-22	0	0	0	intron_retention	FALSE	canonical	3	214	junction_3	94.5705204243549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276867	True	NA	-40	True	NA	NA	NA	109283144	109279584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679
WTC11_00004600	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	199.1520915169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	-109276868	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
WTC11_00004602	chr1	-	7000	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	-10	0	3	multi-exon	FALSE	canonical	3	251	junction_13	63.7184336056956	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAAGCTACAGTTTGTT	-109392245	True	NA	-4	True	AATAAA	-34	NA	109397918	109309564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
WTC11_00004603	chr1	-	6980	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	168	junction_13	78.2868509069738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGACTAAGCTACAGT	-109392233	True	NA	-9	True	AATAAA	-29	NA	109397906	109309569	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
WTC11_00004608	chr1	-	948	10	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-27	3835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	949.655376088259	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCGTTTGTTAGTCATC	-109403700	True	NA	NA	False	AAAAAG	-2	NA	109426475	109395206	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109395239_109401849_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
WTC11_00004609	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_8	152.036128518849	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-109403673	True	NA	-11	True	ATTAAA	-17	NA	109426448	109399041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
WTC11_00004611	chr1	-	5156	2	FSM	ENSG00000181754.7	ENST00000369864.5	5130	2	-27	1	-16	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGACTGGTTTATTT	-109509501	True	NA	-2	True	ATTAAA	-25	NA	109509754	109504178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109509000_109509419
WTC11_00004613	chr1	-	3843	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	198	5	9	0	multi-exon	FALSE	canonical	3	25	junction_2	6.92820323027551	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCATGTCCATGTGCCT	-109740032	True	NA	NA	False	AATAAA	-20	NA	109740318	109733936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
WTC11_00004614	chr1	-	1837	3	FSM	ENSG00000134248.14	ENST00000464240.1	1830	3	0	-7	0	7	multi-exon	FALSE	canonical	3	2430	junction_2	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTCTTTAAACTTAACC	-110394783	True	NA	-16	True	AATAAA	-28	NA	110407694	110401241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110401584_110403918_110404037_110406317
WTC11_00004617	chr1	-	868	4	FSM	ENSG00000134248.14	ENST00000256644.8	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_3	128.315583188048	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	NA	False	NA	-27	True	AATAAA	-17	NA	110407942	110401252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
WTC11_00004618	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	40.4749579644281	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-110960442	True	NA	-11	True	NA	NA	NA	110963922	110947189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
WTC11_00004619	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	45.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-110960485	True	NA	-43	True	AAAAAG	-20	NA	110963965	110947221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110948400_110949850_110950124_110963620
WTC11_00004620	chr1	-	2288	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	5	153	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACTGGTTTGCAGAAT	-111136380	True	NA	NA	False	ATTAAA	-34	NA	111140085	111117009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
WTC11_00004621	chr1	-	2306	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	-110	-98	0	98	multi-exon	FALSE	canonical	3	165	junction_9	34.8502971275216	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATCCCTGCTGAAATTA	-111140181	False	NA	NA	False	NA	NA	NA	111140203	111117064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
WTC11_00004622	chr1	-	2246	9	FSM	ENSG00000156171.15	ENST00000286692.8	2246	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	22.6546766695091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111136335	True	NA	-4	True	AATAAA	-13	NA	111140040	111117332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500
WTC11_00004624	chr1	-	837	6	NIC	ENSG00000156171.15	novel	769	6	NA	NA	-8	43	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	105.315905731281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTGCTGATTCTGATG	-111136365	True	NA	NA	False	NA	NA	NA	111140070	111125334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
WTC11_00004625	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	90.7863425852149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111136385	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
WTC11_00004626	chr1	-	312	1	FSM	ENSG00000260948.1	ENST00000564771.1	2023	1	1692	19	1692	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCAATGAACATTGT	-111431366	False	NA	NA	False	NA	NA	NA	111431376	111431064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111431100_111431400
WTC11_00004627	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	63.5889578115222	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-111445394	True	NA	-6	True	AGTAAA	-16	NA	111449256	111439889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
WTC11_00004628	chr1	-	1413	9	FSM	ENSG00000116455.14	ENST00000449340.1	877	9	0	-536	0	536	multi-exon	FALSE	canonical	3	15	junction_2	255.560658161619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGGTTTTACACAACTCC	-111448716	False	NA	-47	True	NA	NA	NA	111448729	111440691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111441390_111442024_111442130_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618
WTC11_00004629	chr1	-	2633	11	NIC	ENSG00000116455.14	novel	2456	10	NA	NA	22	93	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	287.367778291165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTTCTGCCTCTCGAA	-111445372	True	NA	87	True	AATAGA	-18	NA	111449234	111439796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111441390_111441498_111441605_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
WTC11_00004631	chr1	-	637	6	FSM	ENSG00000116455.14	ENST00000459665.1	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	43.9071748123242	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAAAGTGAAGTCTTTG	-111448878	False	NA	NA	False	NA	NA	NA	111448891	111443348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618
WTC11_00004632	chr1	-	5952	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	-1	0	1	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTCCCTCTGAAT	-111738185	True	NA	-7	True	AATAAA	-19	NA	111739395	111722062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111727805_111739185
WTC11_00004633	chr1	-	202	1	FSM	ENSG00000273483.1	ENST00000608357.1	643	1	355	86	355	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTACACTTCAAGGAGC	NA	False	NA	NA	False	AAGAAA	-32	NA	112518086	112517884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112517900_112518100
WTC11_00004634	chr1	-	4253	15	FSM	ENSG00000007341.19	ENST00000358039.9	4255	15	2	0	2	0	multi-exon	TRUE	canonical	3	30	junction_1	32.636213765993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTTGTGTAAT	-112615883	True	NA	NA	False	AATAAA	-31	NA	112619139	112523513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
WTC11_00004637	chr1	-	2767	14	FSM	ENSG00000007341.19	ENST00000343210.11	1866	14	90	-991	0	991	multi-exon	FALSE	canonical	3	35	junction_1	32.436008918426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTAGTCCTTACTTG	-112615843	True	NA	NA	False	AATGAA	-17	NA	112619099	112540798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
WTC11_00004644	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	62.9655990733565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
WTC11_00004645	chr1	-	848	3	ISM	ENSG00000007341.19	ENST00000467335.5	990	4	648	-2	0	-2	3prime_fragment	FALSE	canonical	3	134	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCAGTTTGTGATATTTT	-112615870	True	NA	-1	True	AATAAA	-19	NA	112619126	112610456	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_112611004_112616812_112616896_112618908
WTC11_00004646	chr1	-	1121	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	-4	0	0	multi-exon	FALSE	canonical	3	83	junction_5	212.039053006752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTTCGGTCTTT	-112699993	True	NA	-31	True	AATAAA	-20	NA	112707127	112701126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
WTC11_00004647	chr1	-	1739	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	-6	-378	-6	374	multi-exon	FALSE	canonical	3	356	junction_4	96.5307593464384	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAAGGCTTTTGCA	-112706166	False	NA	NA	False	GGGGCT	-27	NA	112707440	112700752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
WTC11_00004648	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	254.019369340214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-112700001	True	NA	NA	False	NA	NA	NA	112707135	112701274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
WTC11_00004655	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	344.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	112826268	112820177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820542_112823652_112823755_112825512
WTC11_00004656	chr1	-	782	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-90	8	-90	0	multi-exon	FALSE	canonical	3	676	junction_1	218	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	-112821407	True	NA	-8	True	AATAAA	-15	NA	112825831	112820177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820539_112823652_112823755_112825512
WTC11_00004658	chr1	-	3263	6	NNC	ENSG00000155380.13	novel	3849	6	NA	NA	0	39816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	498.244919693116	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACTAGGAAGAGATAAAG	-112956137	False	NA	NA	False	AAAAAG	-2	NA	112956181	112872030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112872063_112912353_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
WTC11_00004659	chr1	-	4378	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	15	-640	0	640	multi-exon	FALSE	canonical	3	1098	junction_2	91.3492610807553	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACATTTTGCCGCT	-112956137	False	NA	NA	False	ACTAAA	-18	NA	112956181	112911206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
WTC11_00004661	chr1	-	4319	12	FSM	ENSG00000116793.16	ENST00000474926.5	4314	12	0	-5	0	5	multi-exon	FALSE	canonical	3	43	junction_3	63.9975464405724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATAATCGGCCATGCC	NA	False	NA	NA	False	ATTAAA	-27	NA	113715212	113696825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
WTC11_00004662	chr1	-	5934	12	NNC	ENSG00000116793.16	novel	4314	12	NA	NA	-459	5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	67.1232984148026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATAATCGGCCATGCC	NA	False	NA	NA	False	ATTAAA	-27	NA	113715671	113696825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113698991_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
WTC11_00004663	chr1	-	3662	19	FSM	ENSG00000116793.16	ENST00000369604.6	3657	19	0	-5	0	5	multi-exon	FALSE	canonical	3	43	junction_3	53.5007788105307	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATAATCGGCCATGCC	-113758270	True	NA	NA	False	ATTAAA	-27	NA	113759486	113696825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
WTC11_00004664	chr1	-	3244	18	FSM	ENSG00000116793.16	ENST00000393357.6	3244	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	52.9526784890958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTAGGTTTTCTTTGT	-113757939	False	1216	0	True	AATAAA	-22	NA	113759155	113697201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658
WTC11_00004667	chr1	-	2749	15	FSM	ENSG00000116793.16	ENST00000357783.6	2747	15	0	-2	0	2	multi-exon	FALSE	canonical	3	33	junction_14	55.2054141828683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATTTTCTGACTACATT	-113758260	True	NA	-4	True	AATAAA	-23	NA	113759476	113703820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
WTC11_00004668	chr1	-	3415	6	FSM	ENSG00000116793.16	ENST00000412670.1	1063	6	-2352	0	-468	0	multi-exon	FALSE	canonical	3	184	junction_2	19.4874318472189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	NA	False	NA	-8	True	AATAAA	-16	NA	113715680	113705764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
WTC11_00004669	chr1	-	2280	13	ISM	ENSG00000116793.16	ENST00000369604.6	3657	19	10	8934	0	0	5prime_fragment	FALSE	canonical	3	88	junction_12	49.4780394608445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	-113758260	True	NA	-8	True	AATAAA	-16	NA	113759476	113705764	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
WTC11_00004673	chr1	-	6468	7	FSM	ENSG00000081019.14	ENST00000612242.4	6592	7	159	-35	0	34	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTAAATACCTGGAACC	-113810044	True	NA	NA	False	NA	NA	NA	113812289	113761797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
WTC11_00004674	chr1	-	3137	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	-34	70	0	-70	multi-exon	FALSE	canonical	3	45	junction_9	21.5767364435763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCACATTTTGTACATTG	-113904794	False	NA	NA	False	NA	NA	NA	113904833	113894263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
WTC11_00004675	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.9410574038719	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113905031	False	NA	-2	True	ATTAAA	-20	NA	113905070	113894747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
WTC11_00004676	chr1	-	1044	4	FSM	ENSG00000134262.13	ENST00000489499.5	1044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.9544984001001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCGGACTTTGCACAGG	-113904794	False	NA	NA	False	NA	NA	NA	113904833	113899941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113900401_113901754_113901886_113902637_113902863_113904604
WTC11_00004678	chr1	-	799	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	21.4650879336657	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTAATTAATCATG	-114032293	False	NA	-13	True	ATTAAA	-27	NA	114032304	114014900	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
WTC11_00004679	chr1	-	4287	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	65	junction_2	143.091807264156	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTGCCCATTTCTCT	-114151434	False	NA	-15	True	ATTAAA	-5	NA	114152957	114089304	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114092083_114093734_114093804_114097747_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
WTC11_00004681	chr1	-	4424	8	FSM	ENSG00000134207.17	ENST00000609117.5	4424	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	164.954415471892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	-114146970	True	NA	-2	True	ATTAAA	-18	NA	114152917	114089291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152622
WTC11_00004683	chr1	-	7085	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	-5188	0	-5158	0	multi-exon	FALSE	canonical	3	95	junction_7	134.614187929195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	NA	False	NA	16	True	NA	NA	NA	114159038	114091764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
WTC11_00004684	chr1	-	7063	4	NNC	ENSG00000134207.17	novel	843	3	NA	NA	0	5738	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	206.924033296173	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGATCCAGAAGAGTG	-114152345	True	NA	-13	True	AATAAA	-21	NA	114153868	114131930	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114137066_114137494_114138054_114139614_114139881_114152765
WTC11_00004687	chr1	-	8382	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	-13	0	13	multi-exon	FALSE	canonical	3	134	junction_2	16.6940864013465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTCTTCTTCTG	-114508872	True	NA	NA	False	ATTAAA	-30	NA	114511203	114392776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
WTC11_00004688	chr1	-	8070	17	NIC	ENSG00000197323.12	novel	3457	19	NA	NA	-13	3	intron_retention	FALSE	canonical	3	8	junction_16	48.8299024676478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATGAATTTCTTTTTT	-114508885	True	NA	NA	False	ATTAAA	-20	NA	114511216	114392786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114397861_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114510550
WTC11_00004693	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	49.4887753827965	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	-114575492	True	NA	-4	True	AATAAA	-23	NA	114581615	114567556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
WTC11_00004696	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_3	78.3744572903415	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-114701486	True	NA	-7	True	AATAAA	-28	NA	114716771	114704468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
WTC11_00004697	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	2	593	junction_15	817.583104622392	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716275	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
WTC11_00004698	chr1	-	3708	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	-1041	0	0	multi-exon	FALSE	canonical	2	117	junction_18	1034.68266143613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716273	True	NA	-3	True	AATAAA	-25	NA	114757982	114716915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
WTC11_00004700	chr1	-	4299	21	FSM	ENSG00000009307.17	ENST00000610726.5	4274	21	-25	0	-12	0	multi-exon	FALSE	canonical	1	5	junction_18	1149.7974560765	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716330	True	NA	-3	True	AATAAA	-25	NA	114758039	114716915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
WTC11_00004701	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_17	789.970924960999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	-114716265	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
WTC11_00004702	chr1	-	3791	20	FSM	ENSG00000009307.17	ENST00000369530.5	3774	20	0	-17	0	0	multi-exon	FALSE	canonical	1	5	junction_17	993.441071948862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	-114716294	True	NA	-23	True	AATAAA	-14	NA	114758003	114717294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
WTC11_00004707	chr1	-	5494	5	FSM	ENSG00000052723.12	ENST00000060969.6	5494	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	71.2548243980715	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780448
WTC11_00004708	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	126.235890300659	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
WTC11_00004713	chr1	-	482	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	-12	0	3	multi-exon	FALSE	canonical	3	429	junction_2	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAGATTGTGTGC	-114771649	True	NA	-7	True	AATAAA	-29	NA	114780634	114779094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114779285_114780109_114780216_114780448
WTC11_00004714	chr1	-	427	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	-12	0	3	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAGATTGTGTGC	-114771700	True	NA	-7	True	AATAAA	-29	NA	114780685	114779094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114779285_114780448
WTC11_00004716	chr1	-	3967	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	6	-757	3	757	multi-exon	FALSE	canonical	3	85	junction_1	6.32132768281074	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAATATCCTCCAATTC	-115088031	True	NA	NA	False	NA	NA	NA	115089497	115047253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
WTC11_00004719	chr1	-	299	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	2	0	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATCCAGAAAAATTGGGA	-116418413	True	NA	NA	False	AATAAA	-22	NA	116418575	116413731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116413914_116418458
WTC11_00004721	chr1	-	1134	6	FSM	ENSG00000116815.16	ENST00000464088.5	874	6	-55	-205	0	0	multi-exon	FALSE	canonical	3	8	junction_2	38.1124651524931	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-116569740	True	NA	-1	True	AATAAA	-22	NA	116571039	116514533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116514823_116519230_116519303_116521905_116521984_116535964_116536229_116544310_116544605_116570902
WTC11_00004722	chr1	-	1254	5	FSM	ENSG00000116815.16	ENST00000457047.6	1328	5	0	74	0	-74	multi-exon	FALSE	canonical	3	66	junction_1	17.4714052096561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTGTAGTCACATATA	-116569727	True	NA	NA	False	AAAAAG	-44	NA	116571026	116518773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
WTC11_00004723	chr1	-	1129	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	-1	-236	-1	236	multi-exon	FALSE	canonical	3	100	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTCATATAACACGAAT	-116569741	True	NA	NA	False	NA	NA	NA	116571040	116521550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
WTC11_00004724	chr1	-	644	1	FSM	ENSG00000177173.5	ENST00000319092.5	1157	1	89	424	89	-424	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTGCGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	116534003	116533359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116533400_116534000
WTC11_00004725	chr1	-	7245	11	FSM	ENSG00000143061.18	ENST00000369486.8	7235	11	0	-10	0	1	multi-exon	FALSE	canonical	3	48	junction_6	15.8757676979729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACTGCAGTCTTCTAT	-116664068	True	NA	-5	True	AGTAAA	-25	NA	116667733	116574397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
WTC11_00004726	chr1	-	8437	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	-57	-1054	-57	1054	multi-exon	FALSE	canonical	2	9	junction_7	29.6528119442043	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATGCAATGAAAATGACA	-116664147	True	NA	NA	False	TATAAA	-22	NA	116667812	116573344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
WTC11_00004729	chr1	-	3495	6	FSM	ENSG00000134253.10	ENST00000369464.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	31.4922212617656	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120462	True	NA	-14	True	AATAAA	-22	NA	117121762	117111059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118087_117118768_117120713
WTC11_00004730	chr1	-	1109	3	FSM	ENSG00000134253.10	ENST00000485032.1	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	31.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAAGGCATTTCCCATT	-117120492	True	NA	NA	False	NA	NA	NA	117121792	117118033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117118768_117120713_117120902_117121605
WTC11_00004732	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.44996164796075	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-117928362	True	NA	-21	True	AGTAAA	-16	NA	117929621	117863484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
WTC11_00004734	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.26244143216009	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-117928324	True	NA	0	True	AATAAA	-16	NA	117929583	117877221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
WTC11_00004735	chr1	-	1059	5	FSM	ENSG00000196505.11	ENST00000464026.1	1109	5	0	50	0	-50	multi-exon	FALSE	canonical	3	52	junction_4	6.12372435695795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGCAAAGATGAAATGTA	NA	False	NA	NA	False	AATACA	-12	NA	117899130	117882953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056
WTC11_00004739	chr1	-	895	2	FSM	ENSG00000116874.12	ENST00000497761.1	895	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCACCTATTGTAACTGT	-119139475	True	NA	NA	False	NA	NA	NA	119140638	119139647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119140459_119140554
WTC11_00004740	chr1	-	816	2	ISM	ENSG00000227712.2	ENST00000653227.1	861	3	704	8	5	-8	3prime_fragment	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAAAGCGTCTCCCCGA	-119326991	True	NA	-8	True	AATAAA	-13	NA	119327211	119317360	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_119317928_119326962
WTC11_00004743	chr1	-	11425	34	FSM	ENSG00000134250.21	ENST00000256646.7	11425	34	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_18	19.8633069801412	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATGTTGTTAATATG	-120066337	True	NA	NA	False	TATAAA	-25	NA	120069662	119911552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119916695_119917664_119917763_119918405_119918554_119919311_119919614_119920228_119920398_119921712_119921810_119922235_119922447_119922635_119922779_119923636_119923985_119925304_119925811_119926498_119926612_119928975_119929213_119935471_119935605_119937281_119937467_119937856_119938011_119940554_119940757_119941525_119941755_119948413_119948567_119949006_119949127_119950723_119950838_119953542_119953689_119955039_119955233_119959391_119959503_119963573_119963808_119965452_119965567_119966375_119966490_119967432_119967622_119968076_119968233_119969510_119969745_119986959_119987083_119996996_119997333_120005328_120005589_120029905_120029988_120069333
WTC11_00004744	chr1	-	563	2	FSM	ENSG00000134250.21	ENST00000493703.1	553	2	0	-10	0	10	multi-exon	FALSE	canonical	3	77	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTCAGCACTTTCCCT	-119923874	False	NA	NA	False	AATGAA	-28	NA	119923905	119922484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119922779_119923636
WTC11_00004747	chr1	-	1042	2	NNC	ENSG00000223804.5	novel	715	3	NA	NA	-779	8558	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGTAGCCTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	120342650	120258775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_120258884_120341716
WTC11_00004748	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-120341836	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120267839_120340755_120340811_120341716
WTC11_00004749	chr1	-	1317	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	-689	-3	-657	0	multi-exon	FALSE	canonical	3	53	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	NA	False	NA	NA	False	AATAAA	-34	NA	120342528	120267333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120267839_120341716
WTC11_00004751	chr1	-	559	3	NNC	ENSG00000275585.2	novel	553	3	NA	NA	36	1517	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	5	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	-121052085	False	NA	NA	False	AATAAA	-16	NA	121052131	121028074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_121028292_121037561_121037798_121052025
WTC11_00004752	chr1	-	2420	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	-24	0	24	multi-exon	FALSE	canonical	3	218	junction_1	74.1994309651735	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACCATATGCCAGAC	NA	False	NA	NA	False	AATAAA	-41	NA	121184340	121167621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
WTC11_00004755	chr1	-	262	1	FSM	ENSG00000272583.1	ENST00000609485.1	464	1	171	31	171	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAAAGATATTTTAAAT	-121518513	False	NA	-38	True	NA	NA	NA	121518658	121518396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121518400_121518700
WTC11_00004758	chr1	-	2407	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	-12	0	12	multi-exon	FALSE	canonical	3	107	junction_2	85.5686858611256	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGAATACTTACCAT	NA	False	NA	NA	False	AATAAA	-32	NA	143971986	143955274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
WTC11_00004759	chr1	-	4521	20	FSM	ENSG00000266338.7	ENST00000488031.6	4535	20	0	14	0	-14	multi-exon	FALSE	canonical	0	0	junction_5	16.6808065596129	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCATTTCCATGTTTA	-144460955	True	NA	NA	False	AATAAA	-2	NA	144461647	144421403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426451_144427046_144427099_144427817_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450803_144456536_144456806_144461380
WTC11_00004762	chr1	-	338	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCAGCATACAGGAATAAA	NA	False	NA	NA	False	NA	NA	NA	144647128	144646790	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_144646800_144647100
WTC11_00004764	chr1	-	7538	11	FSM	ENSG00000196369.12	ENST00000619678.2	4971	11	-315	-2252	-118	236	multi-exon	FALSE	canonical	3	14	junction_7	66.5754459241543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGCAATTCGCCTTATC	NA	False	NA	NA	False	AATGAA	-29	NA	145095646	144887028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144960337_144960399_144995007_144995201_145092834_145093444_145095222
WTC11_00004766	chr1	-	3394	1	FSM	ENSG00000272419.6	ENST00000621033.1	3389	1	0	-5	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	145167488	145164094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145164100_145167500
WTC11_00004768	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	-145215932	True	NA	NA	False	AATAAA	-19	NA	145216058	145164098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145164639_145214676_145214732_145215638
WTC11_00004771	chr1	-	2084	9	FSM	ENSG00000174827.14	ENST00000417171.6	2065	9	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_3	1.29903810567666	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGGATTCAC	-145707358	False	NA	NA	False	AATAAA	-37	NA	145707368	145670965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145671490_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
WTC11_00004773	chr1	-	4912	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	100100	intron_retention	FALSE	non_canonical	0	0	junction_1	1045.93605073265	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAGACAGTCTAAACT	-145895525	True	NA	NA	False	AATAGA	-43	NA	145927460	145821455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145821483_145921555_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004775	chr1	-	2904	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	-2	0	2	multi-exon	FALSE	canonical	3	97	junction_13	78.2115928391557	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCATGGAGATGGGC	-145859065	False	3041	-2	True	AATAAA	-17	NA	145859081	145848519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
WTC11_00004780	chr1	-	1308	5	ISM	ENSG00000198483.13	ENST00000544626.2	3093	12	13045	0	13045	0	3prime_fragment	FALSE	canonical	3	102	junction_4	12.369316876853	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTGTAATTTTTTTTT	-145872203	True	NA	-1	True	AATAAA	-18	NA	145872821	145866559	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
WTC11_00004782	chr1	-	4912	7	NNC	ENSG00000265241.8	novel	796	6	NA	NA	0	13797	intron_retention	FALSE	non_canonical	0	0	junction_1	1045.93605073265	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGACCTTTTCAGACA	-145895525	True	NA	NA	False	AAAAAG	-1	NA	145927460	145907758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907790_145921559_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004783	chr1	-	748	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	13797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.93605073265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGACCTTTTCAGACA	-145895525	True	NA	NA	False	AAAAAG	-1	NA	145927460	145907758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907791_145925724_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004784	chr1	-	749	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	13797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.93605073265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGACCTTTTCAGACA	-145895525	True	NA	NA	False	AAAAAG	-1	NA	145927460	145907758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907790_145925722_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004785	chr1	-	748	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	13797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.93605073265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGACCTTTTCAGACA	-145895525	True	NA	NA	False	AAAAAG	-1	NA	145927460	145907758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907789_145925722_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004786	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-145886782	False	31935	-2	True	ATTAAA	-19	NA	145918717	145911349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
WTC11_00004787	chr1	-	6031	6	FSM	ENSG00000265241.8	ENST00000583313.7	4909	6	0	-1122	0	1122	multi-exon	FALSE	canonical	3	2629	junction_4	153.62213382192	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGCATGTGTCTTTAT	-145895549	True	NA	-24	True	AATAAA	-2	NA	145927484	145920433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
WTC11_00004788	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_4	976.461898898262	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	-145895525	True	NA	70	True	NA	NA	NA	145927460	145925641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
WTC11_00004791	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.8	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	-145957744	True	NA	0	True	ATTAAA	-21	NA	145958017	145933422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
WTC11_00004792	chr1	-	2961	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	-61	5	-61	-5	multi-exon	TRUE	canonical	3	86	junction_5	13.0587370080302	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTCTGTGAGATGGC	-145995930	False	NA	NA	False	AATAAA	-18	NA	145996640	145992439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
WTC11_00004794	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	20.0062490237426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	-146228081	True	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
WTC11_00004795	chr1	-	1115	5	FSM	ENSG00000264343.7	ENST00000687833.1	1135	5	18	2	3	-2	multi-exon	FALSE	canonical	3	30	junction_4	30.6022874961987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTGGGTGATCAACT	-146228078	True	NA	NA	False	AATAAA	-22	NA	146229023	146156099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189374_146228708
WTC11_00004796	chr1	-	1027	1	Genic_Genomic	ENSG00000277406.2	novel	NA	NA	NA	NA	6316	345	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTTAGGACATTCTCAA	NA	False	NA	NA	False	NA	NA	NA	146321895	146320868	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_146320900_146321900
WTC11_00004801	chr1	-	5586	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	-248	5	-168	-5	multi-exon	FALSE	canonical	3	68	junction_7	25.0363001765559	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATCTGAGTTATTGA	-147172657	False	NA	NA	False	AATAAA	-14	NA	147172718	147155110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
WTC11_00004804	chr1	-	1874	1	FSM	ENSG00000226015.2	ENST00000413611.2	1657	1	-42	-175	-42	175	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTAAATAAAAAGTATGGA	NA	False	NA	13	True	AATAAA	-42	NA	147204974	147203100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147203100_147205000
WTC11_00004806	chr1	-	6946	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	10	0	-10	multi-exon	FALSE	canonical	3	113	junction_1	19.3620476419435	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACTTAACTCTTCTGTT	-147669277	True	NA	NA	False	AATAAA	-13	NA	147670524	147642239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
WTC11_00004809	chr1	-	3265	2	FSM	ENSG00000265107.3	ENST00000621517.1	3183	2	-81	-1	-81	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTTGTTGTCCACT	-147773424	False	NA	-2	True	AATAAA	-18	NA	147773443	147756198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147759272_147773251
WTC11_00004811	chr1	-	4631	21	FSM	ENSG00000263956.8	ENST00000614015.4	4630	21	0	-1	0	1	multi-exon	TRUE	canonical	3	18	junction_20	13.6312141792285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	NA	False	NA	99	True	AATAAA	-16	NA	148127288	148102045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110377_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148124898_148125002_148126828_148127039_148127140
WTC11_00004812	chr1	-	412	4	FSM	ENSG00000227733.11	ENST00000614606.4	513	4	56	45	56	-45	multi-exon	FALSE	canonical	1	2	junction_2	5.43650214343336	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACACAAAAACAAACAGAGG	NA	False	NA	NA	False	NA	NA	NA	148205693	148196142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148196282_148199994_148200095_148200530_148200634_148205623
WTC11_00004814	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	6.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	-148459545	False	NA	-1	True	AATAAA	-16	NA	148459757	148432958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148433644_148435145_148435355_148459601
WTC11_00004824	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149842200_149842700
WTC11_00004825	chr1	-	6440	1	FSM	ENSG00000261716.2	ENST00000564237.2	6440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGAAACTTTTGTATA	NA	False	NA	NA	False	AATAAA	-30	NA	149850937	149844497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149844500_149850900
WTC11_00004832	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1243	junction_5	153.723908355207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-149910942	True	NA	-20	True	AATAAA	-18	NA	149927803	149923316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
WTC11_00004834	chr1	-	2840	17	FSM	ENSG00000014914.21	ENST00000439741.4	2840	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	7.20649663498152	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCATTGTTTCTTGT	-149936622	True	NA	-2	True	ATTAAA	-19	NA	149936879	149928650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149929318_149929622_149929917_149930364_149930548_149930791_149930966_149931259_149931427_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933699_149933854_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153_149936230_149936581
WTC11_00004839	chr1	-	3463	7	NIC	ENSG00000143401.15	novel	3407	7	NA	NA	0	15	intron_retention	TRUE	canonical	3	133	junction_1	380.410049230505	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACTTTTTCAACAATAC	-150190514	True	NA	13	True	AATAAA	-39	NA	150236156	150218401	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_150220759_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
WTC11_00004848	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	77.0528318031783	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150265677	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
WTC11_00004853	chr1	-	4582	2	FSM	ENSG00000143384.14	ENST00000464132.2	4550	2	-175	143	-42	-143	multi-exon	FALSE	canonical	3	797	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAAAACCTCTTTAA	-150579641	False	174	NA	False	ATTAAA	-43	NA	150579652	150574318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150577492_150578243
WTC11_00004854	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	27	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-150573993	True	NA	NA	False	AATAAA	-14	NA	150579610	150574557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150577492_150578243_150578492_150578842
WTC11_00004859	chr1	-	1196	5	NNC	ENSG00000143420.19	novel	633	5	NA	NA	0	7319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	506.575265878625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCTGGTCAAGAGAATT	-150591090	True	NA	NA	False	NA	NA	NA	150629559	150614805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_150614836_150622132_150622860_150625641_150625809_150627466_150627593_150629413
WTC11_00004860	chr1	-	3109	6	NNC	ENSG00000143457.11	novel	973	6	NA	NA	0	31424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.47244000202	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCTGGTCAAGAGAATT	-150691889	True	NA	NA	False	NA	NA	NA	150697108	150614805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_150614839_150646231_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
WTC11_00004861	chr1	-	2106	4	FSM	ENSG00000143420.19	ENST00000369014.10	1227	4	0	-879	0	879	multi-exon	FALSE	canonical	3	853	junction_1	193.530359375474	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAAGTTAATGGTGTTT	-150591143	True	NA	-5	True	AATAAA	-36	NA	150629612	150621245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629413
WTC11_00004863	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	334.023951237033	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	-150628996	False	38469	NA	False	NA	NA	NA	150629128	150622543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
WTC11_00004865	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_1	94.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	-150591108	True	NA	-2	True	ATTAAA	-28	NA	150629577	150623280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150625809_150627466_150627593_150629413
WTC11_00004868	chr1	-	574	4	FSM	ENSG00000143420.19	ENST00000503241.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	605.77461888799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCAGCTTGCTAGCCAG	-150591090	True	NA	NA	False	NA	NA	NA	150629559	150625554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150625809_150626478_150626527_150627466_150627593_150629413
WTC11_00004869	chr1	-	817	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	107	-221	0	221	multi-exon	FALSE	canonical	3	1324	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCACGCCTGTAATCC	-150629338	False	NA	NA	False	TTTAAA	-22	NA	150629470	150626832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150627593_150629413
WTC11_00004870	chr1	-	3131	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	-7	0	7	multi-exon	FALSE	canonical	3	248	junction_2	17.1682847133894	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGTGCACAATTTTATA	-150691935	True	NA	0	True	AATAAA	-24	NA	150697154	150646222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
WTC11_00004871	chr1	-	4328	23	NNC	ENSG00000143437.21	novel	4710	22	NA	NA	0	33890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.6369311239637	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGG	-150871640	True	NA	NA	False	NA	NA	NA	150876568	150775822	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_150775854_150810094_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
WTC11_00004872	chr1	-	3030	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	-76	-1325	0	-3	multi-exon	TRUE	canonical	2	40	junction_5	10.7760126660835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTGGGAGGCTGAGG	-150807796	True	NA	NA	False	AATACA	-39	NA	150808336	150794882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
WTC11_00004875	chr1	-	7869	29	Fusion	ENSG00000143387.14_ENSG00000143437.21	novel	2892	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	40	junction_5	109.983225761839	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAATAAATAGCATCTA	-150871780	True	NA	-30	True	AATAAA	-20	NA	150876708	150796238	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
WTC11_00004877	chr1	-	2892	23	FSM	ENSG00000143437.21	ENST00000515192.5	2892	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	105.502340266237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGATAGTATGGCTT	-150871780	True	NA	-13	True	NA	NA	NA	150876708	150811680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829966_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150861246_150861303_150876542
WTC11_00004878	chr1	-	4634	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	41	-2248	0	0	multi-exon	FALSE	canonical	3	146	junction_17	46.569410561011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCAAGTCTGGACCTGG	-150871640	True	NA	-13	True	ATTAAA	-17	NA	150876568	150809712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
WTC11_00004884	chr1	-	2545	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_10	182.623218677144	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAATATTTTCTTTTT	-150974993	False	65	-6	True	AATAAA	-33	NA	150975003	150965171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
WTC11_00004885	chr1	-	2279	11	NIC	ENSG00000143418.20	novel	2544	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_10	172.55517958033	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTAATATTTTCTTTT	-150974467	False	246	-7	True	AATAAA	-32	NA	150974477	150965172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
WTC11_00004895	chr1	-	3018	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	-12	0	0	multi-exon	FALSE	canonical	3	122	junction_3	11.4755174175285	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGCAGGTGTGTGTT	-151052866	True	NA	-4	True	AATAAA	-26	NA	151059622	151050972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
WTC11_00004899	chr1	-	485	4	FSM	ENSG00000143434.17	ENST00000464018.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTTCCCCAGGCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	151135266	151134198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151134446_151134619_151134676_151134797_151134876_151135162
WTC11_00004901	chr1	-	2462	3	FSM	ENSG00000163155.12	ENST00000368908.10	2462	3	2	-2	2	2	multi-exon	FALSE	canonical	3	24	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTAGTTTTATTTCCC	-151165032	True	NA	1	True	ATTAAA	-19	NA	151165900	151159745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151161021_151161735_151162101_151165078
WTC11_00004904	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	356.367563058144	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	-151181974	True	NA	-12	True	AATAAA	-14	NA	151190158	151176461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
WTC11_00004908	chr1	-	3934	11	FSM	ENSG00000143393.17	ENST00000368874.8	3934	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	27.8668261558434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCTCCTGTGGCCCC	-151327696	False	NA	-5	True	AATAAA	-20	NA	151327715	151291796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151327270
WTC11_00004909	chr1	-	3983	13	FSM	ENSG00000143393.17	ENST00000368875.6	3983	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	63.3659455508679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCCAAGTCACAGAAAAAG	-151327638	False	NA	NA	False	NA	NA	NA	151327657	151291936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151310210_151310256_151315572_151316510_151326171_151326374_151327270
WTC11_00004915	chr1	-	3554	11	NIC	ENSG00000143390.18	novel	3570	11	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_9	100.207983713874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGTGTTCCTCCCTA	-151346740	False	NA	1	True	ATTAAA	-17	NA	151346779	151340638	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151346754
WTC11_00004916	chr1	-	3646	11	FSM	ENSG00000143390.18	ENST00000290524.8	3576	11	0	-70	0	70	multi-exon	FALSE	canonical	3	80	junction_9	67.8387057659564	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATTATCTGCTATAGAT	-151344050	True	NA	70	True	NA	NA	NA	151347251	151340569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346481_151346607_151347210
WTC11_00004917	chr1	-	3640	11	FSM	ENSG00000143390.18	ENST00000452671.7	3570	11	0	-70	0	70	multi-exon	FALSE	canonical	0	0	junction_9	89.508044331222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATTATCTGCTATAGAT	-151344051	True	NA	70	True	NA	NA	NA	151347252	151340569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151347210
WTC11_00004925	chr1	-	1412	10	NIC	ENSG00000143416.21	novel	1963	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	46	junction_8	57.8907016137595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-151371814	True	NA	-4	True	AATAAA	-20	NA	151372694	151364303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369712_151369770_151372637
WTC11_00004926	chr1	-	1963	11	FSM	ENSG00000143416.21	ENST00000493560.5	1963	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	68.5991253588557	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-151371814	True	NA	-4	True	AATAAA	-20	NA	151372694	151364303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
WTC11_00004928	chr1	-	2132	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	1	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.9878247593317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-151371825	True	NA	-4	True	AATAAA	-20	NA	151372705	151364303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
WTC11_00004947	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	83.3070175411269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-151786814	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
WTC11_00004948	chr1	-	3066	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	20	-294	0	279	multi-exon	FALSE	canonical	3	189	junction_12	39.622086293155	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGCATGCACCTGTTG	-151786772	True	NA	NA	False	AATACA	-16	NA	151790480	151773199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
WTC11_00004949	chr1	-	2537	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	69.2482029331264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786722	True	NA	-13	True	AATAAA	-14	NA	151790430	151773493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
WTC11_00004950	chr1	-	2772	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	-4	0	0	multi-exon	FALSE	canonical	3	91	junction_12	62.4946108787701	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786797	True	NA	-13	True	AATAAA	-14	NA	151790505	151773493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
WTC11_00004954	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_4	20.2128671889962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	-151908152	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
WTC11_00004955	chr1	-	1879	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	-47	0	-38	0	multi-exon	FALSE	canonical	3	20	junction_5	24.3903441732356	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	-151908190	True	NA	NA	False	ATTAAA	-19	NA	151909549	151874054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
WTC11_00004958	chr1	-	555	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	88	0	-38	0	multi-exon	FALSE	canonical	3	90	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	-151908190	True	NA	NA	False	AATAAA	-24	NA	151909549	151894829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151895195_151909359
WTC11_00004959	chr1	-	530	3	NNC	ENSG00000159445.13	novel	643	2	NA	NA	63	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTATTGTCAAGAATAAG	-151908080	True	NA	NA	False	AATAAA	-23	NA	151909439	151894830	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151895195_151907320_151907407_151909359
WTC11_00004960	chr1	-	683	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	-12	0	12	multi-exon	FALSE	canonical	3	1349	junction_1	44.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTGTTCCCTCAGAA	-151975848	True	NA	0	True	AATAAA	-36	NA	151993859	151982902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151983325_151986098_151986252_151993751
WTC11_00004961	chr1	-	590	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	0	45479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2208.19851160775	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACACTGATGTTGCTTT	-152014754	True	NA	NA	False	AAAAAG	-1	NA	152037004	151987026	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987054_152032505_152032824_152033647_152033801_152036912
WTC11_00004962	chr1	-	585	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	0	45479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2208.19851160775	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACACTGATGTTGCTTT	-152014754	True	NA	NA	False	AAAAAG	-1	NA	152037004	151987026	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987054_152032510_152032824_152033647_152033801_152036912
WTC11_00004965	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	212.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534284	False	NA	-8	True	AATAAA	-20	NA	153536215	153534598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153534831_153535201_153535376_153535948
WTC11_00004968	chr1	-	516	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	-3	0	3	multi-exon	FALSE	canonical	3	166	junction_2	19.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGTTTGAGAGACTC	-153543875	True	NA	-4	True	AATAAA	-20	NA	153545806	153543617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543924_153544653_153544810_153545752
WTC11_00004972	chr1	-	490	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	-13	0	1	multi-exon	FALSE	canonical	3	268	junction_2	67	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCATCCTGATTTCTTT	-153619330	True	NA	-6	True	AATAAA	-35	NA	153627505	153618785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627482
WTC11_00004973	chr1	-	713	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	-3	0	3	multi-exon	FALSE	canonical	2	3	junction_3	165.791703317412	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGATTTCTTTTC	-153627787	False	461	-4	True	AATAAA	-37	NA	153628248	153618783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
WTC11_00004975	chr1	-	1852	14	FSM	ENSG00000143621.17	ENST00000361891.9	1852	14	0	0	0	0	multi-exon	FALSE	canonical	3	3412	junction_13	199.502398733929	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-153616573	True	NA	0	True	AATAAA	-19	NA	153670993	153661787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
WTC11_00004981	chr1	-	5756	29	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	0	33072	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	52.3986874738251	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTCACTCTTACA	-153943453	True	NA	NA	False	AAAAAG	-5	NA	153946718	153896428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153896455_153929502_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
WTC11_00004982	chr1	-	2530	3	FSM	ENSG00000198837.10	ENST00000480340.1	2530	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-153933253	False	NA	-4	True	AGTAAA	-20	NA	153933265	153929500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153930443_153930538_153931065_153932203
WTC11_00004983	chr1	-	5728	28	FSM	ENSG00000198837.10	ENST00000361217.9	5728	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	52.6634108489913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-153943453	True	NA	-4	True	AGTAAA	-20	NA	153946718	153929500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946300
WTC11_00004995	chr1	-	2279	10	FSM	ENSG00000160741.17	ENST00000303569.10	2290	10	0	11	0	-2	multi-exon	FALSE	canonical	1	1	junction_9	54.908228711614	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACCCTTGGTGTGGTTA	-153958580	False	18768	-5	True	AATAAA	-10	NA	153958615	153947679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153958344
WTC11_00004998	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	885.341867428748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153944724	True	NA	0	True	AATAAA	-27	NA	153963492	153959098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
WTC11_00004999	chr1	-	2013	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	0	9	0	2	multi-exon	FALSE	canonical	2	40	junction_1	630.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTATCTGATTCGTT	-153963606	False	NA	-9	True	AATAAA	-18	NA	153963641	153959107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962528_153962748_153963494
WTC11_00005000	chr1	-	2732	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	-9	0	-2	multi-exon	FALSE	canonical	3	1921	junction_2	37	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTCGTTTGTTTTG	-153963440	False	NA	-2	True	AATAAA	-25	NA	153963475	153959100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528
WTC11_00005001	chr1	-	2047	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	-9	0	-2	multi-exon	FALSE	canonical	3	1301	junction_3	311.182690178401	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTCGTTTGTTTTG	-153944769	True	NA	-2	True	AATAAA	-25	NA	153963537	153959100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
WTC11_00005002	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	899.004758360909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	-153963427	False	NA	-12	True	AATAAA	-15	NA	153963462	153959110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
WTC11_00005003	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	975.602474115354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	-153960001	False	NA	-13	True	AATAAA	-14	NA	153967712	153959111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
WTC11_00005006	chr1	-	1189	9	NNC	ENSG00000143545.10	novel	1164	8	NA	NA	0	10879	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.570761150021	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGATGCTTAGCTTGG	-153973819	True	NA	NA	False	AAAAAG	-2	NA	153986339	153970737	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153970764_153981650_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
WTC11_00005007	chr1	-	1459	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	-243	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	4.32049379893857	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-153965140	False	12520	-2	True	AATAAA	-21	NA	153977660	153974268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
WTC11_00005010	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	24.4114392723358	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	-153973819	True	NA	-22	True	ATTAAA	-20	NA	153986339	153981649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
WTC11_00005011	chr1	-	2084	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTTCCTTCC	-154080827	True	NA	NA	False	AAAACA	-3	NA	154183147	154125748	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125783_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005012	chr1	-	2078	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTTCCTTCCTTC	-154183111	False	NA	NA	False	AAAACA	-6	NA	154183130	154125745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125785_154156357_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005013	chr1	-	2089	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTTCCTTCCTTC	-154080827	True	NA	NA	False	AAAACA	-6	NA	154183147	154125745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125785_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005014	chr1	-	2130	9	NNC	ENSG00000143549.21	novel	3148	8	NA	NA	0	29558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTTCCTTCCTTC	-154080869	True	NA	NA	False	AAAACA	-6	NA	154183189	154125745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125784_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005015	chr1	-	3196	4	FSM	ENSG00000143549.21	ENST00000368545.7	2147	4	0	-1049	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	227.970758358757	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-154172639	False	NA	-5	True	ATTAAA	-31	NA	154172677	154155307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028
WTC11_00005016	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	219.329125530839	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-154080869	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005017	chr1	-	4041	5	FSM	ENSG00000143549.21	ENST00000469717.5	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	1945.46901478795	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTATTTGACTTTTATT	-154080827	True	NA	-6	True	AATAAA	-22	NA	154183147	154156358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154172979_154173083_154173202_154182987
WTC11_00005021	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	1627.94645903033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	-154183111	False	NA	2	True	AATAAA	-17	NA	154183130	154158608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00005026	chr1	-	1692	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	-14	0	0	multi-exon	FALSE	canonical	3	382	junction_6	226.214315786306	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTTGTCTTTTAAT	-154209534	True	NA	-4	True	AATAAA	-36	NA	154220590	154206705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
WTC11_00005027	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	351.848244986386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209563	True	NA	-18	True	AATAAA	-22	NA	154220619	154206719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
WTC11_00005028	chr1	-	1624	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	-14	0	0	multi-exon	FALSE	canonical	3	495	junction_5	166.206377735633	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTTGTCTTTTAAT	-154209568	True	NA	-4	True	AATAAA	-36	NA	154220624	154206705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
WTC11_00005030	chr1	-	2546	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	-1268	0	1268	multi-exon	FALSE	canonical	3	382	junction_5	242.765236391045	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATAATCTGTTTTCT	-154209477	True	NA	NA	False	AATAAA	-17	NA	154220533	154210465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
WTC11_00005031	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	185.347477727645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	-154209572	True	NA	77	True	NA	NA	NA	154220628	154212132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
WTC11_00005032	chr1	-	918	1	FSM	ENSG00000226855.1	ENST00000437336.1	883	1	-41	6	-41	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTCTTAAGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	154379130	154378212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154378200_154379100
WTC11_00005033	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	20.7020865829725	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	-154556157	True	NA	-5	True	AATAAA	-13	NA	154558662	154548576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
WTC11_00005034	chr1	-	349	2	FSM	ENSG00000160714.10	ENST00000474181.1	524	2	175	0	175	0	multi-exon	FALSE	canonical	3	252	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCAGGCCGGCCTGGGCG	-154552180	False	NA	NA	False	NA	NA	NA	154552200	154551750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154551820_154551920
WTC11_00005035	chr1	-	6777	14	FSM	ENSG00000160710.18	ENST00000647682.2	6777	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_13	239.036527623837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	-154608101	False	NA	NA	False	NA	NA	NA	154608114	154581694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154607991
WTC11_00005038	chr1	-	6788	15	FSM	ENSG00000160710.18	ENST00000679899.1	6788	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	238.121999686492	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	-154619673	True	NA	NA	False	NA	NA	NA	154627922	154581694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596939_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
WTC11_00005039	chr1	-	6610	15	FSM	ENSG00000160710.18	ENST00000368474.9	6610	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_14	174.259190019128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-154602653	True	NA	-3	True	AATAAA	-30	NA	154608186	154582056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
WTC11_00005040	chr1	-	6648	15	FSM	ENSG00000160710.18	ENST00000529168.2	6343	15	-142	-163	0	0	multi-exon	FALSE	canonical	3	160	junction_8	235.993481836655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	-154602779	True	NA	-13	True	AATAAA	-20	NA	154608312	154582066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
WTC11_00005041	chr1	-	6529	15	FSM	ENSG00000160710.18	ENST00000368471.8	6519	15	0	-10	0	0	multi-exon	FALSE	canonical	3	471	junction_14	134.290444445566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-154619719	True	NA	-3	True	AATAAA	-30	NA	154627968	154582056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
WTC11_00005042	chr1	-	6436	15	NIC	ENSG00000160710.18	novel	6519	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_8	210.98810296279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	-154619714	True	NA	-13	True	AATAAA	-20	NA	154627963	154582066	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
WTC11_00005045	chr1	-	7291	13	FSM	ENSG00000160710.18	ENST00000681786.1	7272	13	0	-19	0	0	multi-exon	FALSE	canonical	3	264	junction_12	181.424207468451	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-154602671	True	NA	-3	True	AATAAA	-30	NA	154608204	154582056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
WTC11_00005054	chr1	-	1012	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	-10	0	10	multi-exon	FALSE	canonical	3	468	junction_2	23.2701525564402	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCTCTCATTTCCTT	-154933853	True	NA	3	True	AATAAA	-25	NA	154936719	154924729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
WTC11_00005055	chr1	-	3265	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	-39	-19	-15	15	multi-exon	FALSE	canonical	3	63	junction_6	9.17877987534291	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAAAGTTATTGCCTTC	-154956128	False	5085	-8	True	AATAAA	-36	NA	154956138	154944060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
WTC11_00005057	chr1	-	3182	3	FSM	ENSG00000163348.4	ENST00000368457.3	3180	3	0	-2	0	2	multi-exon	FALSE	canonical	3	239	junction_2	28.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACTCCTTGCTGTTGC	-154961759	False	10293	-7	True	AATAAA	-20	NA	154961782	154957023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154959847_154960976_154961027_154961473
WTC11_00005058	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	416	junction_3	207.73946652096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960448	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
WTC11_00005059	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_3	142.641375426175	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960454	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
WTC11_00005060	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	258.538990719431	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
WTC11_00005061	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	291.566304161201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
WTC11_00005062	chr1	-	2541	13	NNC	ENSG00000160691.19	novel	3062	13	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	296.762203717986	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCTGCCTCTTAACC	-154960442	True	NA	-18	True	ATTAAA	-13	NA	154970735	154962301	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
WTC11_00005068	chr1	-	780	6	FSM	ENSG00000160691.19	ENST00000366442.2	780	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	538.926562715181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGTTGGTGAAGGTG	-154969156	True	NA	NA	False	NA	NA	NA	154974395	154968501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154973292_154973509_154974247
WTC11_00005069	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138148	True	NA	-21	True	ATTAAA	-20	NA	155140531	155139890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155140246_155140490
WTC11_00005071	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_1	53.1057644914582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156753	True	NA	-15	True	AATAAA	-15	NA	155173238	155169407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
WTC11_00005073	chr1	-	579	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	-1	0	0	multi-exon	FALSE	canonical	3	1334	junction_3	191.217735114247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156766	True	NA	-15	True	AATAAA	-15	NA	155173251	155169407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
WTC11_00005075	chr1	-	3264	4	FSM	ENSG00000163463.13	ENST00000490672.2	3263	4	0	-1	0	0	multi-exon	FALSE	canonical	3	22	junction_2	727.072822273594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156819	True	NA	-15	True	AATAAA	-15	NA	155173304	155169407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155172490_155172564_155172893_155173220
WTC11_00005076	chr1	-	526	3	FSM	ENSG00000185499.17	ENST00000468978.2	899	3	0	373	0	-373	multi-exon	FALSE	canonical	3	5	junction_1	5.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGTCAGAGGAGTTTT	-155187759	False	NA	NA	False	NA	NA	NA	155187831	155187080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155187375_155187454_155187577_155187721
WTC11_00005078	chr1	-	631	4	ISM	ENSG00000160766.15	ENST00000693555.1	1768	8	944	2559	825	-2016	internal_fragment	FALSE	canonical	3	8	junction_3	22.0655588845805	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGGACCTCCATG	-155217967	False	NA	NA	False	NA	NA	NA	155218049	155216383	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155216622_155216856_155217030_155217239_155217374_155217963
WTC11_00005079	chr1	-	529	4	ISM	ENSG00000160766.15	ENST00000462587.2	1797	10	0	3072	0	-2529	5prime_fragment	FALSE	canonical	1	2	junction_3	25.5734237050888	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATCTACCACCAGACC	-155218941	False	NA	NA	False	NA	NA	NA	155219023	155216896	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155217030_155217239_155217374_155217963_155218050_155218847
WTC11_00005080	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	9.84936546179499	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155241177	False	NA	NA	False	NA	NA	NA	155241249	155234451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
WTC11_00005082	chr1	-	3191	12	FSM	ENSG00000160767.22	ENST00000361361.7	3190	12	0	-1	0	1	multi-exon	FALSE	canonical	3	81	junction_11	15.4041960581637	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGTCACCAGTGAAATT	-155255473	False	NA	-15	True	AATAAA	-31	NA	155255483	155247203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
WTC11_00005085	chr1	-	949	5	NIC	ENSG00000116521.11	novel	1537	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	302.295695470511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262213	False	NA	-2	True	AATAAA	-23	NA	155262227	155255980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155256420_155256673_155256792_155258825_155258955_155260329_155260451_155262085
WTC11_00005087	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	62.0603285118601	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262346	False	NA	-2	True	AATAAA	-23	NA	155262360	155255980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
WTC11_00005088	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	191.11541549759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262416	False	NA	-2	True	AATAAA	-23	NA	155262430	155255980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
WTC11_00005093	chr1	-	2028	13	FSM	ENSG00000176444.19	ENST00000361168.9	1934	13	0	-94	0	94	multi-exon	FALSE	canonical	3	102	junction_10	93.5096548788175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAATGAAGCACAGCCA	NA	False	NA	87	True	NA	NA	NA	155273287	155262773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269717_155270807_155270978_155273200
WTC11_00005094	chr1	-	2248	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	-94	0	94	multi-exon	FALSE	canonical	3	235	junction_10	67.2063055077424	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAATGAAGCACAGCCA	NA	False	NA	87	True	NA	NA	NA	155273504	155262773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
WTC11_00005095	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	110.063167437823	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273329	155262873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
WTC11_00005096	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	108.348845043324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273482	155262873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
WTC11_00005097	chr1	-	2702	7	FSM	ENSG00000176444.19	ENST00000497188.1	2702	7	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	47.246693005966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACCCCCATCCCTGGA	-155269349	False	NA	-19	True	AATAAA	-13	NA	155269363	155262879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292
WTC11_00005099	chr1	-	704	4	FSM	ENSG00000116539.14	ENST00000478837.5	723	4	0	19	0	-19	multi-exon	FALSE	canonical	3	8	junction_2	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTGTGCAACAGAATGAA	NA	False	NA	NA	False	NA	NA	NA	155346429	155343059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155343487_155343603_155343743_155344182_155344274_155346382
WTC11_00005100	chr1	-	354	1	FSM	ENSG00000223503.1	ENST00000427475.1	662	1	258	50	258	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCATCTCTCGGGGGACC	NA	False	NA	NA	False	NA	NA	NA	155591004	155590650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155590600_155591000
WTC11_00005102	chr1	-	2501	10	NNC	ENSG00000163374.20	novel	3073	10	NA	NA	0	10516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.126910284469	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGGCACATAAATATG	-155680443	False	NA	NA	False	NA	NA	NA	155680456	155648926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155648958_155659459_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415
WTC11_00005103	chr1	-	2504	4	FSM	ENSG00000163374.20	ENST00000442834.6	2508	4	4	0	4	0	multi-exon	FALSE	canonical	3	248	junction_3	75.7818506562679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155671059	False	NA	-3	True	AATAAA	-29	NA	155671087	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319
WTC11_00005105	chr1	-	2927	10	FSM	ENSG00000163374.20	ENST00000368340.9	2927	10	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	91.5258851599972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688560	False	NA	-3	True	AATAAA	-29	NA	155688573	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
WTC11_00005106	chr1	-	3063	10	FSM	ENSG00000163374.20	ENST00000368339.9	3073	10	0	10	0	1	multi-exon	FALSE	canonical	3	248	junction_3	50.5556776555302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCATTGATTTGTGCAA	-155686348	True	NA	-10	True	AATAAA	-22	NA	155688656	155659452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
WTC11_00005108	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	117.110584017367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686390	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
WTC11_00005109	chr1	-	2743	12	FSM	ENSG00000163374.20	ENST00000361831.9	2743	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	135.868555828087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686397	True	NA	-3	True	AATAAA	-29	NA	155688705	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155679927_155680009_155680415_155680457_155688070_155688202_155688658
WTC11_00005111	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	89.3955256151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686449	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
WTC11_00005114	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	106.641779504107	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
WTC11_00005115	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	125.033155602824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
WTC11_00005116	chr1	-	2731	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	-8	0	0	multi-exon	FALSE	canonical	3	248	junction_3	54.7632175826074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686466	True	NA	-3	True	AATAAA	-29	NA	155688774	155659445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
WTC11_00005121	chr1	-	7745	32	FSM	ENSG00000116580.20	ENST00000368331.6	7745	32	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.3168520134631	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGTTTTCTTCACCTCC	-155853252	True	NA	NA	False	AGTAAA	-20	NA	155857214	155749658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752591_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
WTC11_00005122	chr1	-	7104	32	FSM	ENSG00000116580.20	ENST00000271883.9	7138	32	34	0	34	0	multi-exon	FALSE	canonical	3	25	junction_31	44.7061163223614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTACTTTTTTTTGGT	-155853299	True	NA	NA	False	NA	NA	NA	155857261	155750331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857158
WTC11_00005123	chr1	-	7045	32	NIC	ENSG00000116580.20	novel	7745	32	NA	NA	4	-10	combination_of_known_junctions	FALSE	canonical	3	53	junction_31	43.7269219643289	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGCTCCTTTCTCTACT	-155853238	True	NA	NA	False	NA	NA	NA	155857200	155750341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
WTC11_00005124	chr1	-	813	4	FSM	ENSG00000116580.20	ENST00000460075.1	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	8.60232526704263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGTTGTGGAATCCAAT	NA	False	NA	NA	False	AAAACA	-17	NA	155757967	155754016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155754489_155756957_155757078_155757179_155757324_155757890
WTC11_00005125	chr1	-	210	2	FSM	ENSG00000116580.20	ENST00000483032.1	833	2	0	623	0	-623	multi-exon	FALSE	canonical	3	73	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAGCCTTATGAAGGG	NA	False	NA	NA	False	NA	NA	NA	155757940	155757163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155757324_155757890
WTC11_00005126	chr1	-	5097	21	FSM	ENSG00000116580.20	ENST00000361040.9	5118	21	4	17	4	-17	multi-exon	FALSE	canonical	3	25	junction_20	54.3728792689885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	-155853238	True	NA	NA	False	NA	NA	NA	155857200	155764443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857158
WTC11_00005127	chr1	-	5097	20	FSM	ENSG00000116580.20	ENST00000471341.5	5097	20	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_19	53.9747042424592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCACCTGACCATACT	-155853255	True	NA	NA	False	ATTAAA	-18	NA	155857217	155764783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
WTC11_00005128	chr1	-	4770	21	FSM	ENSG00000116580.20	ENST00000622608.2	4973	21	-57	260	34	-60	multi-exon	FALSE	canonical	3	53	junction_20	53.0593064410005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAGATGGAAAGGAT	-155853299	True	NA	NA	False	NA	NA	NA	155857261	155764843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
WTC11_00005132	chr1	-	3423	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	-32	-1	0	1	multi-exon	FALSE	canonical	3	190	junction_1	4.73286382647969	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTTCCTTTGCTTCC	-155908010	True	NA	0	True	AATACA	-16	NA	155911381	155897806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
WTC11_00005134	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	79.4496696028372	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-155908031	True	NA	-33	True	NA	NA	NA	155911402	155900182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
WTC11_00005135	chr1	-	419	4	FSM	ENSG00000143622.11	ENST00000650659.1	538	4	0	119	0	-119	multi-exon	FALSE	canonical	3	198	junction_2	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATCCCAGAATGTT	-155908010	True	NA	NA	False	NA	NA	NA	155911381	155904730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155904805_155910449_155910507_155910655_155910805_155911242
WTC11_00005136	chr1	-	2960	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	4	-3	4	3	multi-exon	FALSE	canonical	3	99	junction_3	29.3743437544725	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTTCTCTGTTTTCT	-155924796	True	NA	-4	True	AATAAA	-17	NA	155934409	155913041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
WTC11_00005138	chr1	-	4502	13	FSM	ENSG00000132680.11	ENST00000368320.7	4499	13	0	-3	0	3	multi-exon	FALSE	canonical	3	99	junction_2	29.3399613723899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTTCTCTGTTTTCT	-155924786	True	NA	-4	True	AATAAA	-17	NA	155934399	155913041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
WTC11_00005139	chr1	-	2785	14	NNC	ENSG00000132680.11	novel	2961	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	52.9089873910431	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924756	True	NA	-7	True	AATAAA	-14	NA	155934369	155913044	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921525_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
WTC11_00005148	chr1	-	4154	22	NIC	ENSG00000116584.21	novel	2958	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	17.1509240279158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTCTTCCATAATGTC	-155975767	True	NA	-12	True	ATTAAA	-19	NA	155978501	155946849	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
WTC11_00005149	chr1	-	4173	22	FSM	ENSG00000116584.21	ENST00000361247.9	4169	22	0	-4	0	1	multi-exon	FALSE	canonical	3	32	junction_16	15.8020636443314	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTCTTCCATAATGTC	-155975813	True	NA	-12	True	ATTAAA	-19	NA	155978547	155946849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
WTC11_00005156	chr1	-	1108	6	FSM	ENSG00000163479.14	ENST00000295702.9	1108	6	0	0	0	0	multi-exon	FALSE	canonical	3	1409	junction_5	178.96211889671	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTTTTCTTAGCCC	-155997720	True	NA	-1	True	AATAAA	-18	NA	156020951	156009047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020887
WTC11_00005158	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	779.457931300123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-155997702	True	NA	-58	True	AATGAA	-37	NA	156020933	156009104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
WTC11_00005159	chr1	-	1064	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	-24	0	0	multi-exon	FALSE	canonical	3	76	junction_2	741.905148924039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-155997704	True	NA	-58	True	AATGAA	-37	NA	156020935	156009104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
WTC11_00005165	chr1	-	3581	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	1	0	-1	multi-exon	FALSE	canonical	3	246	junction_4	20.5951450589696	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTTGGCGTTTGTTTT	-156053098	True	NA	NA	False	AATAAA	-22	NA	156053798	156035299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
WTC11_00005166	chr1	-	502	2	FSM	ENSG00000160803.8	ENST00000459954.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGTAGGGGGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	156042538	156041871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156041988_156042152
WTC11_00005169	chr1	-	6593	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	5	-7	5	7	multi-exon	FALSE	canonical	3	64	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCGTTCTCTGCATGTAA	-156081705	True	NA	-14	True	ATTAAA	-23	NA	156082460	156072005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156077683_156081544
WTC11_00005170	chr1	-	4601	23	NNC	ENSG00000198952.8	novel	4559	22	NA	NA	0	20977	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	114.911976733038	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTCACGCCTGTAAT	-156271997	True	NA	NA	False	ACTAAA	-40	NA	156282825	156228246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156228289_156249223_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
WTC11_00005171	chr1	-	4515	22	NNC	ENSG00000198952.8	novel	4559	22	NA	NA	-60	20969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.782146052969	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGCGGTGGCTCACG	-156282486	False	NA	NA	False	ACTAAA	-32	NA	156282885	156228254	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156228289_156249223_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
WTC11_00005175	chr1	-	658	3	FSM	ENSG00000198715.13	ENST00000461597.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	205.5	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTGTGTTCCATTGT	-156289305	False	NA	0	True	TATAAA	-24	NA	156293381	156290088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156290361_156292885_156293210_156293319
WTC11_00005176	chr1	-	1612	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	-1	0	0	multi-exon	FALSE	canonical	3	297	junction_4	66.1253355379011	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291603	True	NA	0	True	AATAGA	-21	NA	156295679	156292686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
WTC11_00005177	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_4	136.694001331441	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
WTC11_00005178	chr1	-	1361	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	4	0	4	0	multi-exon	FALSE	canonical	3	41	junction_1	159.73180647573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291609	True	NA	0	True	AATAGA	-21	NA	156295685	156292686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
WTC11_00005180	chr1	-	1016	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	38	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	193.046338708842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACAGGGCTCCAGTCTC	-156291533	False	NA	-11	True	AATAGA	-10	NA	156295609	156292697	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
WTC11_00005186	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3511	junction_10	243.134389507011	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-156283796	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
WTC11_00005187	chr1	-	1816	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	-1	0	0	multi-exon	FALSE	canonical	3	119	junction_10	1100.75232725187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-156283749	True	NA	-21	True	ATTAAA	-15	NA	156338245	156308967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
WTC11_00005188	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	1357.05872859547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	-156283761	True	NA	NA	False	NA	NA	NA	156338257	156309164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
WTC11_00005191	chr1	-	583	6	FSM	ENSG00000163468.15	ENST00000478640.6	583	6	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_3	1567.56499067822	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGATGCTGTCAAGAT	-156283809	True	NA	-78	True	NA	NA	NA	156338305	156320922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156321026_156324971_156325090_156333546_156333644_156334867_156334919_156335826_156335889_156338153
WTC11_00005192	chr1	-	513	7	FSM	ENSG00000163468.15	ENST00000415548.1	513	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1819.42732901195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGGTATCTTGGGGG	-156283718	True	NA	NA	False	NA	NA	NA	156338214	156324979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156325090_156333215_156333285_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
WTC11_00005193	chr1	-	1063	6	FSM	ENSG00000163468.15	ENST00000368256.3	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1551.47782452731	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAGGACACTTTTTT	-156283815	True	NA	NA	False	AATATA	-2	NA	156338311	156332652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156333285_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
WTC11_00005194	chr1	-	720	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	0	60	0	-60	multi-exon	FALSE	canonical	2	4	junction_1	1.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTAAGAGCTTAATAATA	-156456618	False	NA	NA	False	ATTAAA	-39	NA	156456631	156446226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156446574_156455627_156455722_156456352
WTC11_00005195	chr1	-	559	3	FSM	ENSG00000125462.19	ENST00000452465.2	857	3	226	72	87	45	multi-exon	FALSE	canonical	2	2	junction_1	2.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGAAGATTGAATTATT	-156456513	False	NA	NA	False	NA	NA	NA	156456526	156452961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156453253_156455627_156455722_156456352
WTC11_00005197	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	5.72615900976503	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-156568374	True	NA	-18	True	AATAAA	-18	NA	156572565	156525404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
WTC11_00005202	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	52.4423882144268	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-156595732	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
WTC11_00005203	chr1	-	740	3	FSM	ENSG00000160818.17	ENST00000494414.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGCGACATCAAGAAG	-156592377	False	NA	NA	False	AAAAAG	-10	NA	156598124	156595597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156595850_156596080_156596479_156598034
WTC11_00005205	chr1	-	2467	5	FSM	ENSG00000160818.17	ENST00000473910.5	2464	5	0	-3	0	0	multi-exon	FALSE	canonical	2	22	junction_3	233.538406905588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAAGGAG	-156595724	True	NA	NA	False	NA	NA	NA	156601471	156595716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156595850_156596080_156598122_156598226_156598320_156598967_156599105_156601408
WTC11_00005211	chr1	-	2454	1	Genic_Genomic	ENSG00000132688.11	novel	NA	NA	NA	NA	6192	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGACTCTTCTTTCCCCC	-156664441	False	NA	0	True	AATAAA	-21	NA	156671215	156668761	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_156668800_156671200
WTC11_00005213	chr1	-	977	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	-3	0	3	multi-exon	FALSE	canonical	3	899	junction_3	69.1712849863776	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGGCTCATTGGGCAG	-156689177	True	NA	-31	True	AATAAA	-5	NA	156705583	156699602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
WTC11_00005214	chr1	-	1048	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	-15	0	3	multi-exon	TRUE	canonical	3	32	junction_4	417.843496419413	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGGCTCATTGGGCAG	-156705665	False	145	-31	True	AATAAA	-5	NA	156705816	156699602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
WTC11_00005217	chr1	-	2424	7	NNC	ENSG00000143321.19	novel	2073	7	NA	NA	-87	27943	intron_retention	FALSE	non_canonical	0	0	junction_1	511.163840879049	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGGGGGAGGGGATTT	-156723179	True	NA	NA	False	NA	NA	NA	156751762	156714165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156714195_156742109_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
WTC11_00005219	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156723522	True	NA	-1	True	GATAAA	-21	NA	156728435	156721890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156723463_156724147_156724349_156726905
WTC11_00005220	chr1	-	2989	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	-4	0	0	multi-exon	FALSE	canonical	3	47	junction_3	97.4896005849969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	NA	False	NA	-1	True	GATAAA	-21	NA	156728766	156721890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
WTC11_00005223	chr1	-	738	5	NIC	ENSG00000143314.12	novel	883	6	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	150.821914853247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736855	True	NA	-11	True	AATAAA	-17	NA	156741074	156737302	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156737535_156738030_156738135_156738342_156738439_156738521_156738765_156741011
WTC11_00005224	chr1	-	889	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	-6	0	6	multi-exon	FALSE	canonical	1	148	junction_2	104.296883941947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGCTGCTGTGTGGTA	-156736869	True	NA	-5	True	AATAAA	-23	NA	156741088	156737296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
WTC11_00005225	chr1	-	891	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	-8	0	6	multi-exon	FALSE	canonical	1	148	junction_2	111.433208694715	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGCTGCTGTGTGGTA	-156736912	True	NA	-5	True	AATAAA	-23	NA	156741131	156737296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
WTC11_00005226	chr1	-	558	4	FSM	ENSG00000143314.12	ENST00000412846.5	514	4	-44	0	-1	0	multi-exon	FALSE	canonical	2	18	junction_3	164.148306925983	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACCATGGATTACCGGG	-156736913	True	NA	NA	False	NA	NA	NA	156741132	156738117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156738135_156738342_156738439_156738521_156738765_156740930
WTC11_00005228	chr1	-	2311	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	0	-2	0	2	multi-exon	FALSE	canonical	3	1328	junction_4	25.2618289124125	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTCTGACTGATTCTT	-156723092	True	NA	-4	True	AATAAA	-18	NA	156751675	156742106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
WTC11_00005236	chr1	-	1200	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2723	1	0	0	3prime_fragment	FALSE	canonical	3	23	junction_1	5.61248608016091	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGTCCTCCAGGCTCC	-156813296	True	NA	-10	True	AATAAA	-29	NA	156814111	156806243	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
WTC11_00005238	chr1	-	4802	10	FSM	ENSG00000132694.19	ENST00000487682.5	4796	10	0	-6	0	1	multi-exon	FALSE	canonical	1	2	junction_3	45.5146157504771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTGTGTTTCTT	-156945612	False	NA	-4	True	AAGAAA	-18	NA	156945631	156934838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156936059_156936815_156937006_156937248_156937497_156938417_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018
WTC11_00005240	chr1	-	7274	40	NIC	ENSG00000132694.19	novel	7261	41	NA	NA	-108	1	combination_of_known_splicesites	TRUE	canonical	3	51	junction_33	25.9929439674438	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTGTGTTTCTT	-157041131	True	NA	-4	True	AAGAAA	-18	NA	157045850	156934838	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156936059_156936815_156937006_156937248_156937497_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156954891_156954922_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156971696_156971817_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
WTC11_00005241	chr1	-	536	4	FSM	ENSG00000132694.19	ENST00000461678.1	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	3.85861230093008	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAGAGAAGAAAATGATT	-156947368	False	NA	NA	False	NA	NA	NA	156947378	156945907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156946163_156946661_156946788_156946935_156947016_156947303
WTC11_00005244	chr1	-	2417	2	FSM	ENSG00000143297.19	ENST00000462218.1	2620	2	203	0	203	0	multi-exon	FALSE	canonical	2	4	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCATGTGTATGTGTG	NA	False	NA	1	True	AATAAA	-15	NA	157515870	157513376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157515765_157515841
WTC11_00005245	chr1	-	1379	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	-4	0	0	multi-exon	FALSE	canonical	3	499	junction_4	46.7031851162209	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGTGTCTGGGGCC	-159920778	True	NA	-1	True	AATAAA	-23	NA	159925507	159918106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
WTC11_00005247	chr1	-	3996	21	FSM	ENSG00000085552.18	ENST00000361509.7	3996	21	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	24.6135633340644	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	-159943551	True	NA	-2	True	AATAAA	-17	NA	159945596	159927038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934285_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
WTC11_00005248	chr1	-	4454	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	-393	-2	-393	0	multi-exon	FALSE	canonical	3	54	junction_18	19.4486503387767	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	-159945317	True	NA	-2	True	AATAAA	-17	NA	159946006	159927038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
WTC11_00005249	chr1	-	4217	20	NIC	ENSG00000085552.18	novel	3996	21	NA	NA	-393	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_18	29.6883162520823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	-159945317	True	NA	-2	True	AATAAA	-17	NA	159946006	159927038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934285_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159943396_159943629_159945572
WTC11_00005251	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.452779528592	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	-160098672	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
WTC11_00005252	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_5	60.8677984560711	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160095800	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
WTC11_00005253	chr1	-	876	2	FSM	ENSG00000162729.14	ENST00000460351.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCAGAGAAAAGGGCCG	-160095315	False	NA	NA	False	NA	NA	NA	160095332	160093759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160094172_160094868
WTC11_00005254	chr1	-	5384	15	NNC	ENSG00000132716.19	novel	4106	14	NA	NA	0	74868	intron_retention	FALSE	non_canonical	0	0	junction_1	233.275260022951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTGAAAGGGAGGAGAA	-160250398	True	NA	NA	False	NA	NA	NA	160262425	160140846	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215721_160217709_160218323_160218441_160218848_160218969_160220458_160221815_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
WTC11_00005256	chr1	-	4024	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	99	junction_12	169.491641878491	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250416	True	NA	-29	True	AGTAAA	-22	NA	160262443	160215714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
WTC11_00005257	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_13	180.162057226002	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250424	True	NA	-29	True	AGTAAA	-22	NA	160262451	160215714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
WTC11_00005259	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_13	182.788881357508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250522	True	NA	-34	True	AGTAAA	-17	NA	160262549	160215719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
WTC11_00005264	chr1	-	1881	2	FSM	ENSG00000132716.19	ENST00000481831.1	1881	2	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAAAGTATTTACTCT	-160220126	False	NA	NA	False	AATAAA	-16	NA	160220139	160217850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160218441_160218848
WTC11_00005267	chr1	-	1606	4	NIC	ENSG00000132716.19	novel	1607	4	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	2	junction_3	152.703052432563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGCTTATACTGTTGT	-160250411	True	NA	34	True	AATAAA	-11	NA	160262438	160239227	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160240371_160243959_160244035_160261284_160261351_160262116
WTC11_00005274	chr1	-	382	1	FSM	ENSG00000224261.2	ENST00000453374.2	886	1	-42	546	-42	-546	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCTGGGAGCCATGGC	NA	False	NA	NA	False	NA	NA	NA	160267267	160266885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160266900_160267300
WTC11_00005275	chr1	-	4163	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	-510	0	510	multi-exon	FALSE	canonical	3	670	junction_7	38.1928511314751	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAACCAAGAAGAGTATTG	-160276322	True	NA	NA	False	NA	NA	NA	160285133	160276296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
WTC11_00005276	chr1	-	4088	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	8	-592	0	532	multi-exon	FALSE	canonical	3	109	junction_6	233.760383013604	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATATAAGGGAGATCAA	-160276335	True	NA	NA	False	NA	NA	NA	160285146	160276274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
WTC11_00005279	chr1	-	894	7	FSM	ENSG00000162735.19	ENST00000532643.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	266.924927023811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGGGACCTGAGGCAG	-160276335	True	NA	NA	False	NA	NA	NA	160285146	160279492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282943_160283110_160283529_160283640_160285054
WTC11_00005282	chr1	-	5354	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	-27	-9	-4	9	multi-exon	TRUE	canonical	3	721	junction_17	64.4837370485768	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTATTCTGTGACAAA	-160329009	True	NA	NA	False	AATAAA	-37	NA	160343277	160288584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
WTC11_00005283	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	157.881652546892	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	-160328980	True	NA	-13	True	AATAAA	-21	NA	160343248	160289272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
WTC11_00005288	chr1	-	3668	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	0	51360	intron_retention	FALSE	non_canonical	0	0	junction_1	529.552273151575	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCAGGCATTCCAATC	-160994046	True	NA	NA	False	NA	NA	NA	161021143	160943850	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160943872_160996193_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
WTC11_00005289	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	4.89064079103534	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	-160954420	True	NA	-4	True	ACTAAA	-17	NA	160954809	160945024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
WTC11_00005290	chr1	-	591	2	FSM	ENSG00000158764.7	ENST00000490489.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACAGGGCTGCTGGCTG	-160951085	False	NA	NA	False	NA	NA	NA	160951474	160950552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160950712_160951042
WTC11_00005292	chr1	-	4653	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	0	21370	intron_retention	FALSE	non_canonical	0	0	junction_1	529.552273151575	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCACAATCTTCCAGAT	-160994078	True	NA	NA	False	AAAAAG	-1	NA	161021175	160973840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160973866_160995244_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
WTC11_00005293	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_3	143.451458645963	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-160994055	True	NA	-13	True	ATTAAA	-18	NA	161021152	160995210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
WTC11_00005299	chr1	-	591	2	FSM	ENSG00000215845.11	ENST00000462952.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	1728	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161034860	False	NA	-13	True	AATAAA	-16	NA	161038307	161037630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912
WTC11_00005300	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019788	True	NA	-13	True	AATAAA	-16	NA	161038937	161037630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161038076_161038550_161038674_161038879
WTC11_00005301	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	725.545924727642	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019801	True	NA	-13	True	AATAAA	-16	NA	161038950	161037630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
WTC11_00005302	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	246.841379567257	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019815	True	NA	-13	True	AATAAA	-16	NA	161038964	161037630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
WTC11_00005303	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	605	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019828	True	NA	-13	True	AATAAA	-16	NA	161038977	161037630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038879
WTC11_00005306	chr1	-	1796	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	11	0	-4	0	multi-exon	TRUE	canonical	2	4	junction_2	4.10365690573664	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-161042519	True	NA	NA	False	GATAAA	-15	NA	161045966	161039250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
WTC11_00005307	chr1	-	1052	2	FSM	ENSG00000158773.14	ENST00000472217.1	1097	2	45	0	45	0	multi-exon	FALSE	canonical	3	13	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-161037091	False	NA	NA	False	NA	NA	NA	161040538	161039294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161040010_161040201
WTC11_00005308	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.53431361950185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	-161042515	True	NA	NA	False	NA	NA	NA	161045962	161039919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
WTC11_00005311	chr1	-	603	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	-5	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	123.083530805529	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-161093867	True	NA	0	True	ATTAAA	-20	NA	161118037	161100555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
WTC11_00005313	chr1	-	2303	6	FSM	ENSG00000158796.17	ENST00000458050.6	2300	6	0	-3	0	0	multi-exon	FALSE	canonical	3	29	junction_5	126.214103807776	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	-161132435	False	58	-9	True	AATAAA	-20	NA	161132466	161120973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
WTC11_00005315	chr1	-	1068	6	FSM	ENSG00000158796.17	ENST00000486041.5	1068	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	130.488926733267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTAATGTGTCTCTACAGC	-161130816	False	NA	NA	False	NA	NA	NA	161130847	161121929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124211_161124413_161124527_161130814
WTC11_00005318	chr1	-	3178	5	FSM	ENSG00000158850.15	ENST00000470882.5	3178	5	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_3	33.2744271175328	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	-161174324	True	NA	-19	True	AATAAA	-15	NA	161177420	161171310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161174050_161174992_161175229_161175807
WTC11_00005320	chr1	-	2414	8	FSM	ENSG00000158850.15	ENST00000622395.4	2414	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	81.0202796482814	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	161177968	161171310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
WTC11_00005321	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	144.567052446473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174401	True	NA	-20	True	AATAAA	-14	NA	161177497	161171311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
WTC11_00005329	chr1	-	9774	9	FSM	ENSG00000158859.10	ENST00000367996.6	9777	9	0	3	0	-3	multi-exon	FALSE	canonical	3	19	junction_7	7.9912061042123	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTCTTCCTTTGTCT	-161197956	True	NA	-4	True	AATAAA	-18	NA	161199054	161184304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161191565_161192064_161192241_161193212_161193389_161193639_161193827_161193934_161194222_161195464_161195636_161196170_161196304_161196556_161196881_161197994
WTC11_00005331	chr1	-	3176	8	FSM	ENSG00000162745.11	ENST00000294794.8	3175	8	0	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_3	2.71804251292006	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGTGCACTTTTGTTC	-162023548	True	NA	1	True	AATAAA	-19	NA	162023869	161983190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161984277_161984803_161984981_161997824_161998350_162000112_162000339_162006296_162006474_162017399_162017508_162019918_162020183_162023256
WTC11_00005332	chr1	-	5879	5	FSM	ENSG00000143248.13	ENST00000313961.10	5670	5	-213	4	-213	-4	multi-exon	FALSE	canonical	3	261	junction_1	7.64852927038918	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCATATGAGTCCTCCT	-163203098	False	NA	-5	True	ATTAAA	-17	NA	163203129	163142302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163202791
WTC11_00005336	chr1	-	599	4	FSM	ENSG00000232995.7	ENST00000449680.5	788	4	20	169	2	-125	multi-exon	FALSE	canonical	2	3	junction_3	2.94392028877595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTAGGCTTATAAGAGG	-163321144	True	NA	NA	False	AATAAA	-45	NA	163321772	163248443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163248707_163306232_163306330_163308543_163308632_163321621
WTC11_00005337	chr1	-	463	5	FSM	ENSG00000232995.7	ENST00000528019.5	512	5	0	49	0	-49	multi-exon	FALSE	canonical	0	0	junction_3	5.7227615711298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAACTGTTGGAGTACT	-163321076	True	NA	NA	False	NA	NA	NA	163321704	163300606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163300692_163306232_163306330_163308543_163308632_163319181_163319292_163321621
WTC11_00005338	chr1	-	574	2	FSM	ENSG00000232995.7	ENST00000528818.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGAAATGTACTTCC	-163321113	True	NA	NA	False	NA	NA	NA	163321741	163318837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163319292_163321621
WTC11_00005342	chr1	-	4449	7	FSM	ENSG00000143183.18	ENST00000612311.4	4468	7	18	1	14	-1	multi-exon	FALSE	canonical	3	588	junction_4	38.1400926410341	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAGTATTCCTTCAT	-165758386	True	NA	-1	True	ATTAAA	-14	NA	165768904	165724293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
WTC11_00005343	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	218.607461497137	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-165758358	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
WTC11_00005344	chr1	-	752	6	FSM	ENSG00000143183.18	ENST00000481278.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	249.051480621979	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTGATCACATCTAC	-165758319	True	NA	NA	False	NA	NA	NA	165768837	165743168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768481
WTC11_00005346	chr1	-	2149	1	FSM	ENSG00000215835.2	ENST00000400979.2	1969	1	0	-180	0	180	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAAAACA	-166277583	False	NA	NA	False	ATTAAA	-21	NA	166277597	166275448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166275400_166277600
WTC11_00005347	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_4	45.1595809889999	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-166871558	True	NA	0	True	AATAAA	-16	NA	166876264	166856509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
WTC11_00005348	chr1	-	663	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	-167220469	False	NA	-4	True	AATAAA	-17	NA	167220493	167219830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167219800_167220500
WTC11_00005349	chr1	-	1619	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	-22	-519	-22	-14	multi-exon	FALSE	canonical	1	2	junction_1	1.46969384566991	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAAAATGCAGCTTTA	-167439568	True	NA	-13	True	AATAAA	-5	NA	167439662	167430653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
WTC11_00005350	chr1	-	1969	4	FSM	ENSG00000143162.9	ENST00000370509.5	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	27.3780122645081	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGATTCGTTTTCTT	-167549402	True	NA	NA	False	ATTAAA	-19	NA	167553762	167541012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167542302_167546100_167546286_167548001_167548122_167553387
WTC11_00005351	chr1	-	2191	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	-14	0	14	multi-exon	FALSE	canonical	3	429	junction_1	36.9425229241318	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTCATTAAAACCTC	-167931477	True	NA	8	True	ATTAAA	-26	NA	167936040	167916714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
WTC11_00005357	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_10	27.3178414742072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364736	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
WTC11_00005359	chr1	-	4297	7	FSM	ENSG00000143156.14	ENST00000524967.5	4298	7	0	1	0	-1	multi-exon	FALSE	canonical	3	228	junction_5	21.6929327969579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCAGATATCTTTGCA	-169364711	True	NA	NA	False	NA	NA	NA	169367772	169283821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
WTC11_00005361	chr1	-	1882	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	-22	45	22	multi-exon	TRUE	canonical	0	0	junction_5	18.810635289644	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAACAAATTGAACAAC	-169427116	True	NA	22	True	AATAAA	-45	NA	169427417	169394847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
WTC11_00005362	chr1	-	1929	6	FSM	ENSG00000117477.13	ENST00000367805.7	1914	6	7	-22	-5	22	multi-exon	FALSE	canonical	0	0	junction_5	19.6834956245074	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAACAAATTGAACAAC	-169427166	True	NA	22	True	AATAAA	-45	NA	169427467	169394847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169395207_169397236_169397389_169419012_169419160_169421362_169422314_169424810_169424951_169427287
WTC11_00005363	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-169427161	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169422314_169424810_169424931_169427287
WTC11_00005365	chr1	-	3835	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	3	-226	0	226	multi-exon	FALSE	canonical	3	149	junction_3	6.34350061086148	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTTTTTTTTG	-169483615	True	NA	NA	False	NA	NA	NA	169485941	169463682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
WTC11_00005366	chr1	-	1427	2	FSM	ENSG00000171806.12	ENST00000303469.6	1426	2	0	-1	0	1	multi-exon	FALSE	canonical	2	4	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTTTGATTTCTGTT	-169793538	False	1151	-11	True	AATAAA	-17	NA	169794689	169792527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169793898_169794632
WTC11_00005369	chr1	-	6302	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	6	0	-6	multi-exon	FALSE	canonical	3	19	junction_2	6.08903842071052	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCACTGTGATAAATCAG	-169893406	True	NA	-5	True	ATTAAA	-10	NA	169893896	169849636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
WTC11_00005370	chr1	-	1833	12	FSM	ENSG00000000457.14	ENST00000423670.1	2077	12	244	0	-64	0	multi-exon	FALSE	canonical	1	1	junction_11	9.87441807051965	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCCCCTTAAGGTTC	-169894009	False	NA	NA	False	NA	NA	NA	169894023	169854510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169894006
WTC11_00005371	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_18	6.89453595528961	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-170074587	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
WTC11_00005372	chr1	-	437	1	FSM	ENSG00000233328.3	ENST00000442087.2	423	1	29	-43	29	43	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTTCCCTCCCCATAC	NA	False	NA	NA	False	NA	NA	NA	171670910	171670473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171670500_171670900
WTC11_00005373	chr1	-	4977	8	FSM	ENSG00000117533.15	ENST00000236192.12	4977	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.5917298853054	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCACTTTGGCTTATTC	-171740491	True	NA	NA	False	AATAAA	-22	NA	171742065	171700159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
WTC11_00005374	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	41.1747419542612	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	-171740486	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
WTC11_00005377	chr1	-	1460	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	-4	0	4	multi-exon	FALSE	canonical	3	143	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCATGATTTTTCCA	-172442501	True	NA	0	True	ATTAAA	-20	NA	172444069	172441452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_172442831_172443987
WTC11_00005381	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	11.1785508899857	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173824515	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
WTC11_00005382	chr1	-	2124	5	FSM	ENSG00000120334.16	ENST00000345664.10	1847	5	113	-390	0	90	multi-exon	FALSE	canonical	3	69	junction_3	12.0078099585228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAACAATTATATAGAATC	-173823651	False	NA	NA	False	NA	NA	NA	173824019	173799459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925
WTC11_00005387	chr1	-	413	7	ISM	ENSG00000234741.9	ENST00000686995.1	580	11	1785	6	839	0	3prime_fragment	FALSE	canonical	3	178	junction_2	1292.45198707298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173866195	False	50	-37	True	AATAAA	-14	NA	173866206	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176
WTC11_00005388	chr1	-	565	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-133	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_5	503.330001092722	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00005389	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2175	junction_4	495.804621017415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00005390	chr1	-	723	9	ISM	ENSG00000234741.9	ENST00000456812.7	753	10	946	0	2	0	3prime_fragment	FALSE	canonical	3	178	junction_1	1227.85264155557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00005391	chr1	-	609	11	FSM	ENSG00000234741.9	ENST00000689958.1	619	11	4	6	0	0	multi-exon	FALSE	canonical	3	178	junction_2	1150.01887375817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005392	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1906	junction_11	643.43628117622	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005393	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1906	junction_9	700.20675958808	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005395	chr1	-	563	11	FSM	ENSG00000234741.9	ENST00000687022.1	566	11	2	1	0	0	multi-exon	FALSE	canonical	3	97	junction_3	1171.78035484471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005396	chr1	-	486	9	FSM	ENSG00000234741.9	ENST00000687435.1	500	9	8	6	0	0	multi-exon	FALSE	canonical	3	84	junction_2	1255.26897018129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005397	chr1	-	1698	8	FSM	ENSG00000234741.9	ENST00000431268.5	1698	8	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_7	750.75455920245	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805433	True	NA	-37	True	AATAAA	-14	NA	173867989	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
WTC11_00005398	chr1	-	541	10	ISM	ENSG00000234741.9	ENST00000686995.1	580	11	948	7	2	0	3prime_fragment	FALSE	canonical	3	178	junction_2	1160.89615235094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173867032	False	62556	-38	True	AATAAA	-13	NA	173867043	173863901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00005399	chr1	-	645	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	-2	0	0	multi-exon	FALSE	canonical	3	3349	junction_1	116	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173864895	False	NA	-38	True	AATAAA	-13	NA	173864906	173863901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483
WTC11_00005400	chr1	-	510	10	FSM	ENSG00000234741.9	ENST00000691982.1	518	10	2	6	0	-3	multi-exon	FALSE	canonical	3	90	junction_3	1477.30892311696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCTGGAGTGTGTAG	-173805431	True	NA	-43	True	AATAAA	-8	NA	173867987	173863906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00005401	chr1	-	447	4	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	2824	-103	1	0	3prime_fragment	FALSE	canonical	3	3349	junction_1	119.622554543679	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-173864894	False	NA	-67	True	ATTAAA	-7	NA	173864905	173863930	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674
WTC11_00005414	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	62.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-175014751	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175014852_175018417_175018577_175023363
WTC11_00005415	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	-175014741	True	NA	-49	True	NA	NA	NA	175023415	175014244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175014852_175018417_175018577_175023271
WTC11_00005416	chr1	-	4550	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	-2	0	2	multi-exon	FALSE	canonical	3	33	junction_1	4.18993502999218	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGCCATATTTCTTT	-175191525	True	NA	2	True	AATAAA	-23	NA	175192776	175156983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
WTC11_00005418	chr1	-	4488	4	FSM	ENSG00000235750.10	ENST00000444639.5	4494	4	-103	109	-47	-109	multi-exon	FALSE	canonical	1	3	junction_3	16.9967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTAAGTGTGTGTACA	-175193036	False	NA	-110	True	NA	NA	NA	175193046	175157095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192859
WTC11_00005423	chr1	-	2556	2	FSM	ENSG00000242193.11	ENST00000481349.1	2556	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCTCAG	-178037518	True	NA	NA	False	NA	NA	NA	178037924	178035273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178037802_178037896
WTC11_00005424	chr1	-	980	1	FSM	ENSG00000228196.1	ENST00000423212.1	1072	1	148	-56	148	56	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACCTGAAGCCCACTC	NA	False	NA	NA	False	TATAAA	-23	NA	178747606	178746626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178746600_178747600
WTC11_00005426	chr1	-	8324	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	-5	0	-4	multi-exon	TRUE	canonical	3	12	junction_4	19.8466341954723	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCGGACTGATTCTTGA	-179871491	True	NA	-8	True	AATAAA	-19	NA	179877803	179839970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
WTC11_00005427	chr1	-	8419	8	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	19.1939616355068	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-179871478	True	NA	-13	True	AATAAA	-14	NA	179877790	179839975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179865435_179865855_179877238_179877374_179877692
WTC11_00005428	chr1	-	7056	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	9	2	0	-2	multi-exon	FALSE	canonical	3	57	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCAACTGTCATACATT	-179871478	True	NA	-13	True	AATAAA	-35	NA	179877790	179859031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179865855_179877238_179877374_179877692
WTC11_00005433	chr1	-	370	2	FSM	ENSG00000230124.8	ENST00000622400.1	562	2	0	192	0	-192	multi-exon	FALSE	canonical	3	4	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCTTTCAAGCTGAGA	NA	False	NA	NA	False	NA	NA	NA	180274713	180273805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180274113_180274650
WTC11_00005435	chr1	-	4914	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	-104	0	91	multi-exon	FALSE	canonical	1	125	junction_6	100.147646105179	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGGATCATAGCCCAT	-181012011	True	NA	95	True	NA	NA	NA	181022870	180972620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
WTC11_00005436	chr1	-	4703	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	93	13	93	0	multi-exon	FALSE	canonical	3	16	junction_5	156.715538476566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	-181022974	False	NA	-9	True	AATAAA	-16	NA	181023028	180972724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
WTC11_00005438	chr1	-	7557	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	-3	0	3	multi-exon	FALSE	canonical	3	1285	junction_2	108.651839479239	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGACTCTGTTTTA	-182385778	True	NA	NA	False	AATAAA	-17	NA	182391790	182378094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
WTC11_00005439	chr1	-	4519	8	FSM	ENSG00000135821.19	ENST00000311223.9	4719	8	205	-5	205	4	multi-exon	FALSE	canonical	3	37	junction_7	626.222885273939	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTTTGTTCATTGTA	-182391989	False	NA	NA	False	ACTAAA	-25	NA	182392001	182381699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182390496_182390853_182391678
WTC11_00005440	chr1	-	6132	2	FSM	ENSG00000135821.19	ENST00000491322.1	6132	2	0	0	0	0	multi-exon	FALSE	canonical	3	1388	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGATGTGTTTGTGA	-182390292	False	NA	-37	True	TATAAA	-17	NA	182390304	182382893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182387293_182388571
WTC11_00005447	chr1	-	4197	7	FSM	ENSG00000135828.11	ENST00000367559.7	4238	7	37	4	37	-4	multi-exon	FALSE	canonical	2	6	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTAGTCTGATTTTCT	-182589161	True	NA	NA	False	AATAAA	-13	NA	182589219	182573637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182575579_182576255_182576390_182581224_182581358_182582052_182582259_182584080_182584167_182585326_182586971_182589166
WTC11_00005448	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	19.536824204563	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	-182603063	True	NA	-1	True	AATAAA	-19	NA	182604389	182598622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
WTC11_00005449	chr1	-	234	1	FSM	ENSG00000224040.1	ENST00000419500.1	290	1	69	-13	69	13	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATACCATGTCTTATC	NA	False	NA	NA	False	NA	NA	NA	182942335	182942101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182942100_182942300
WTC11_00005450	chr1	-	5484	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	-44	1	-44	-1	multi-exon	FALSE	canonical	3	23	junction_8	3.95474398665704	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTGTCTTGGTCAAG	-183417406	True	NA	0	True	AATAAA	-18	NA	183418424	183248237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
WTC11_00005451	chr1	-	7228	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	38	0	-38	multi-exon	FALSE	canonical	0	0	junction_3	376.263501049759	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTTTTACTATAAATAAAA	-183630965	True	NA	NA	False	NA	NA	NA	183635783	183620883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
WTC11_00005452	chr1	-	2078	4	NNC	ENSG00000162704.16	novel	2455	3	NA	NA	-160	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	376.263501049759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTCTGACTTTAACA	-183631996	True	NA	-23	True	AATAAA	-21	NA	183635943	183626193	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_183627595_183630460_183630638_183633081_183633154_183635515
WTC11_00005453	chr1	-	3620	4	FSM	ENSG00000198756.12	ENST00000367521.5	4723	4	1054	49	1054	-49	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTTCTGGAGCTCT	NA	False	NA	-64	True	GATAAA	-2	NA	183945564	183935885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183939038_183940580_183940788_183944195_183944324_183945431
WTC11_00005454	chr1	-	6589	20	FSM	ENSG00000116406.20	ENST00000318130.13	6837	20	0	248	0	8	multi-exon	FALSE	canonical	3	51	junction_7	9.22750315114724	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGAATCACTGTGCAT	-184752497	True	NA	2	True	AATAAA	-35	NA	184754858	184690484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184694473_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
WTC11_00005456	chr1	-	6888	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	-4	0	4	multi-exon	FALSE	canonical	3	10	junction_9	3.64553711109932	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGATGTCATTTATTT	-184973629	True	NA	-2	True	AATAAA	-20	NA	184974508	184791027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
WTC11_00005457	chr1	-	4378	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	-17	0	17	multi-exon	TRUE	canonical	3	173	junction_13	14.2006395371936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGTTGACTCTGCTAG	-185155179	True	NA	-3	True	ATTAAA	-33	NA	185156953	185118083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
WTC11_00005460	chr1	-	3777	8	FSM	ENSG00000116679.16	ENST00000480769.5	3776	8	0	-1	0	1	multi-exon	TRUE	canonical	3	1609	junction_7	55.5638996001496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGATCACTTCTCATT	-185306464	False	NA	-15	True	AATAAA	-29	NA	185306500	185296386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535
WTC11_00005462	chr1	-	4285	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	-628	0	1	multi-exon	TRUE	canonical	3	144	junction_8	512.507543575919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGATCACTTCTCATT	-185296895	True	NA	-15	True	AATAAA	-29	NA	185317273	185296386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
WTC11_00005463	chr1	-	1816	6	FSM	ENSG00000116679.16	ENST00000475046.5	1816	6	0	0	0	0	multi-exon	FALSE	canonical	3	1641	junction_5	48.8565246410344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTCAAGAAGTCCC	-185301704	False	NA	-29	True	AATAAA	-18	NA	185301714	185297770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971
WTC11_00005467	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_37	98.2437702859576	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	-186365834	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
WTC11_00005468	chr1	-	7625	52	NIC	ENSG00000047410.14	novel	9636	51	NA	NA	-95	-2174	combination_of_known_junctions	FALSE	canonical	3	42	junction_51	106.860971383013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATTCATTTCTTCAT	NA	False	NA	-10	True	AATAAA	-20	NA	186375788	186313825	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
WTC11_00005473	chr1	-	515	3	FSM	ENSG00000047410.14	ENST00000451586.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	134.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	-186374714	False	979	NA	False	AATGAA	-10	NA	186375693	186373392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_186373464_186374877_186375187_186375558
WTC11_00005474	chr1	-	290	1	FSM	ENSG00000226723.2	ENST00000431492.2	780	1	517	-27	517	27	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATATTAAGAGGAGTATT	NA	False	NA	NA	False	NA	NA	NA	192246970	192246680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_192246700_192247000
WTC11_00005475	chr1	-	5194	11	FSM	ENSG00000116750.14	ENST00000367454.6	5184	11	0	-10	0	6	multi-exon	FALSE	canonical	3	281	junction_3	73.733642253723	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGGTGTATTTTTAAAAA	-193050738	True	NA	3	True	AATAAA	-27	NA	193059360	193012243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005476	chr1	-	5333	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	-6	0	6	multi-exon	FALSE	canonical	3	206	junction_3	91.4625606464197	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGGTGTATTTTTAAAAA	-193059382	False	NA	3	True	AATAAA	-27	NA	193059496	193012243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005477	chr1	-	1734	12	NIC	ENSG00000116750.14	novel	1355	12	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	163.037642056283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGTAAATTTTCTTCA	-193050726	True	NA	NA	False	AATAAA	-13	NA	193059348	193015769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005481	chr1	-	2487	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	113	-1093	0	1093	multi-exon	FALSE	canonical	3	68	junction_1	133.04469173928	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTTGTATAA	-193059182	False	NA	NA	False	AAAAAG	-44	NA	193059296	193017311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005482	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	158.620447234875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050739	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005483	chr1	-	1596	12	NIC	ENSG00000116750.14	novel	1534	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_2	172.857701951539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050726	True	NA	NA	False	AATAAA	-20	NA	193059348	193018404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193018821_193020306_193020457_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005484	chr1	-	1530	12	NIC	ENSG00000116750.14	novel	1534	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	193.402675889767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050726	True	NA	NA	False	AATAAA	-20	NA	193059348	193018404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193018821_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00005485	chr1	-	1683	7	FSM	ENSG00000116750.14	ENST00000443327.5	785	7	0	-898	0	681	multi-exon	FALSE	canonical	3	56	junction_1	200.257126381726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTGCTCATTTAAT	-193029296	False	NA	1	True	AATAAA	-21	NA	193029309	193017723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178
WTC11_00005489	chr1	-	10863	28	FSM	ENSG00000066279.19	ENST00000367409.9	10863	28	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_24	60.4648658313239	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTATTCCTGTCTATT	-197142103	True	NA	NA	False	AATAAA	-20	NA	197146669	197084126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197100430_197105186_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
WTC11_00005490	chr1	-	6122	27	FSM	ENSG00000066279.19	ENST00000294732.11	6132	27	16	-6	-9	-1	multi-exon	FALSE	canonical	2	24	junction_10	62.826943679213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTGTCTATTATCTT	-197142112	True	NA	NA	False	AATAAA	-25	NA	197146678	197084121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
WTC11_00005492	chr1	-	2434	4	FSM	ENSG00000066279.19	ENST00000679766.1	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCAGTAGGGTCACTAT	-197142088	True	NA	NA	False	AATAAA	-15	NA	197146654	197139575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197139872_197142330_197143811_197143956_197144101_197146140
WTC11_00005495	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	-200404972	True	NA	-20	True	AATAAA	-29	NA	200410056	200404939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200409720_200409945
WTC11_00005496	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-200404952	True	NA	-31	True	AATAAA	-18	NA	200410036	200404950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200409724_200409945
WTC11_00005497	chr1	-	7334	31	NNC	ENSG00000118193.12	novel	7291	30	NA	NA	-63	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.2994719000634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCGTGGTCTATGCTT	-200617184	True	NA	-4	True	AATAAA	-18	NA	200620814	200551499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_200552916_200552935_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
WTC11_00005498	chr1	-	7294	30	FSM	ENSG00000118193.12	ENST00000367350.5	7291	30	0	-3	0	0	multi-exon	FALSE	canonical	3	74	junction_20	15.5422786515913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGGTCTATGCTTTTT	-200617121	True	NA	-1	True	AATAAA	-21	NA	200620751	200551496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
WTC11_00005501	chr1	-	2324	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	-38	-57	-38	57	multi-exon	FALSE	canonical	3	59	junction_4	10.5810766783664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCCACAAAGACTCTG	-200668381	True	NA	NA	False	AATAAA	-29	NA	200669945	200643979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
WTC11_00005502	chr1	-	1885	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	27.0334155362499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATATTGTATTTATTT	-200668343	True	NA	NA	False	AATAAA	-8	NA	200669907	200644128	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
WTC11_00005503	chr1	-	9338	35	FSM	ENSG00000116852.15	ENST00000461742.7	9334	35	0	-4	0	4	multi-exon	TRUE	canonical	3	16	junction_30	9.60229932095094	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGGTGTCCCCTGTCC	-201021680	True	NA	-10	True	AATAAA	-19	NA	201023714	200969385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200973579_200974713_200974914_200975498_200975670_200976775_200976894_200977211_200977377_200979534_200979716_200980959_200981097_200983055_200983095_200984858_200984973_200986843_200986919_200986995_200987202_200988295_200988354_200988492_200988545_200988765_200988932_200989941_200990044_200990137_200990333_200990575_200990724_200990916_200991150_200991656_200991726_200992281_200992390_200996195_200996396_200998383_200998576_200999348_200999467_200999882_200999965_201000389_201000609_201000716_201000781_201002160_201002351_201003585_201003782_201004339_201004456_201004765_201004934_201005307_201005443_201005544_201005695_201008768_201008952_201009265_201009489_201023342
WTC11_00005504	chr1	-	9295	34	FSM	ENSG00000116852.15	ENST00000360529.9	5389	34	-306	-3600	0	0	multi-exon	FALSE	canonical	3	16	junction_29	9.926266275248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGAGGTGTCCCCT	-201021680	True	NA	-14	True	AATAAA	-15	NA	201023714	200969389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200973579_200974713_200974914_200975498_200975670_200976775_200976894_200977211_200977377_200979534_200979716_200980959_200981097_200984858_200984973_200986843_200986919_200986995_200987202_200988295_200988354_200988492_200988545_200988765_200988932_200989941_200990044_200990137_200990333_200990575_200990724_200990916_200991150_200991656_200991726_200992281_200992390_200996195_200996396_200998383_200998576_200999348_200999467_200999882_200999965_201000389_201000609_201000716_201000781_201002160_201002351_201003585_201003782_201004339_201004456_201004765_201004934_201005307_201005443_201005544_201005695_201008768_201008952_201009265_201009489_201023342
WTC11_00005505	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	75.1976562134752	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201147103	True	NA	-5	True	ATTAAA	-18	NA	201154474	201134771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
WTC11_00005507	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	501.034928922126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201171550	True	NA	-5	True	ATTAAA	-18	NA	201171574	201134771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
WTC11_00005509	chr1	-	1546	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	-2	0	1	multi-exon	FALSE	canonical	3	60	junction_4	485.806710534138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTTTTAAGAGATT	-201147130	True	NA	-4	True	ATTAAA	-19	NA	201154501	201134770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
WTC11_00005510	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	473.699229469502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	-201147062	True	NA	NA	False	NA	NA	NA	201154433	201135598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
WTC11_00005513	chr1	-	1244	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	-95	7	-11	-3	multi-exon	TRUE	canonical	0	0	junction_13	12.2074658394862	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGACTGGCATTTCTGT	-201377742	False	NA	-12	True	AATAAA	-11	NA	201377775	201359020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
WTC11_00005517	chr1	-	2743	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	6	0	-6	multi-exon	FALSE	canonical	3	377	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATGCTGTGATCAATT	-201467462	True	NA	NA	False	NA	NA	NA	201469188	201464283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201466179_201468340
WTC11_00005518	chr1	-	2040	6	FSM	ENSG00000159176.14	ENST00000340006.7	1820	6	-220	0	-220	0	multi-exon	FALSE	canonical	3	82	junction_5	7.88416133777081	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTCCAATCCTGTG	-201507320	False	144	-1	True	AATAAA	-17	NA	201507343	201483529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201484790_201485282_201485377_201488854_201488985_201490175_201490345_201496191_201496305_201507069
WTC11_00005524	chr1	-	1499	6	FSM	ENSG00000077152.11	ENST00000646595.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	138.33669072231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327495	True	NA	-16	True	AATAAA	-18	NA	202341970	202331656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335819_202341894
WTC11_00005525	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	128.543533481852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327505	True	NA	-16	True	AATAAA	-18	NA	202341980	202331656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
WTC11_00005526	chr1	-	858	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	-34	0	-13	0	multi-exon	FALSE	canonical	3	29	junction_5	485.39502813001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	-202327518	True	NA	-14	True	AATATA	-14	NA	202341993	202331737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
WTC11_00005528	chr1	-	343	2	Genic_Genomic	ENSG00000236439.4	novel	254	1	NA	NA	0	50896	multi-exon	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGCAGAGGGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	202472117	202420967	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_202420989_202471795
WTC11_00005529	chr1	-	254	1	FSM	ENSG00000236439.4	ENST00000422457.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAGTCAAGAT	NA	False	NA	NA	False	NA	NA	NA	202472117	202471863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202471900_202472100
WTC11_00005531	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	9.61769203083567	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	-202709352	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
WTC11_00005532	chr1	-	9292	27	FSM	ENSG00000117139.18	ENST00000367265.9	9292	27	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_21	74.9156922596699	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGATTTTTTTTTTT	-202785378	True	NA	NA	False	CATAAA	-18	NA	202808421	202724494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
WTC11_00005533	chr1	-	9485	26	FSM	ENSG00000117139.18	ENST00000648338.1	9485	26	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_20	66.5288629092667	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAAACTTTTAGCTCC	-202785430	True	NA	NA	False	AATAAA	-22	NA	202808473	202724886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
WTC11_00005538	chr1	-	6638	26	FSM	ENSG00000117139.18	ENST00000647757.1	6678	26	48	-8	45	0	multi-exon	FALSE	canonical	2	6	junction_25	202.91903409981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTTGTCTGCAGTTT	-202807948	False	23043	-15	True	ATTAAA	-16	NA	202808004	202727403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202807962
WTC11_00005539	chr1	-	6212	26	FSM	ENSG00000117139.18	ENST00000650569.1	6202	26	0	-10	0	0	multi-exon	FALSE	canonical	3	62	junction_22	197.173369398608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATAATTAAATCTC	-202785373	True	NA	2	True	TTTAAA	-21	NA	202808416	202727434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202773117_202773289_202774612_202774736_202777016_202777095_202808101
WTC11_00005540	chr1	-	6543	28	FSM	ENSG00000117139.18	ENST00000367264.7	6520	28	0	-23	0	0	multi-exon	FALSE	canonical	3	51	junction_23	256.27426045283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGACTTCTAGTTGTC	-202785438	True	NA	-23	True	ATTAAA	-8	NA	202808481	202727411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
WTC11_00005542	chr1	-	5919	26	FSM	ENSG00000117139.18	ENST00000649770.1	5919	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_24	269.231065072365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCATAGCTATTTTCCTT	-202785378	True	NA	NA	False	NA	NA	NA	202808421	202727674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729104_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202777016_202777095_202808101
WTC11_00005546	chr1	-	4810	27	NIC	ENSG00000117139.18	novel	9292	27	NA	NA	190	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	204.943898370481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAGCTTAAGAGTCCA	-202806959	False	NA	-6	True	ATTAAA	-20	NA	202807015	202728695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202806976
WTC11_00005556	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	60	junction_1	64.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	-202858680	True	NA	NA	False	NA	NA	NA	202861608	202851827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202853281_202858881_202859103_202861447
WTC11_00005557	chr1	-	1492	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	12	-392	12	392	multi-exon	FALSE	canonical	3	92	junction_1	48.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACCATGTGTCTGGTA	-202858680	True	NA	-5	True	AATAAA	-33	NA	202861608	202857054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202858165_202858881_202859103_202861447
WTC11_00005560	chr1	-	3335	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	-24	0	20	multi-exon	FALSE	canonical	3	135	junction_5	28.1782989004947	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCTTTAGTAGATATT	-202925377	True	NA	2	True	ATTAAA	-41	NA	202927234	202891095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
WTC11_00005563	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_3	60.9516369002205	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202947405	True	NA	-9	True	AATAAA	-31	NA	202958312	202940831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
WTC11_00005571	chr1	-	2432	8	FSM	ENSG00000143845.15	ENST00000367201.7	2431	8	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_2	58.0193493410533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGTCTTGAGTGACAA	-204151855	False	NA	0	True	ATTAAA	-17	NA	204151894	204131060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
WTC11_00005573	chr1	-	2422	7	NIC	ENSG00000143845.15	novel	2431	8	NA	NA	6	-30	intron_retention	FALSE	canonical	3	12	junction_5	79.5550124127952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTGCATTAAAATGCT	-204151258	True	NA	-31	True	NA	NA	NA	204152038	204131091	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204149702_204149963_204151594
WTC11_00005579	chr1	-	437	1	FSM	ENSG00000219133.2	ENST00000403842.2	483	1	67	-21	67	21	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGGGAGAAATATCGC	NA	False	NA	NA	False	NA	NA	NA	204347191	204346754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204346800_204347200
WTC11_00005581	chr1	-	7695	34	FSM	ENSG00000133056.14	ENST00000367187.7	7686	34	0	-9	0	9	multi-exon	FALSE	canonical	1	1	junction_33	8.29296005112469	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTTTTGACACAG	-204490413	False	NA	NA	False	AATAAA	-33	NA	204490424	204422618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204489815_204489932_204490067
WTC11_00005582	chr1	-	7663	33	FSM	ENSG00000133056.14	ENST00000684373.1	7658	33	9	-14	9	9	multi-exon	FALSE	canonical	3	17	junction_18	6.11861912526021	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTTTTGACACAG	-204492922	True	NA	NA	False	AATAAA	-33	NA	204494796	204422618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204494355
WTC11_00005584	chr1	-	3492	2	FSM	ENSG00000170382.12	ENST00000367177.4	3468	2	-27	3	-27	-3	multi-exon	FALSE	canonical	3	50	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTCTGAGTATTGAGT	-204685747	False	24	NA	False	AATAAA	-45	NA	204685765	204617172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204620219_204685319
WTC11_00005585	chr1	-	1342	1	FSM	ENSG00000174529.7	ENST00000367167.4	1332	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTCTGCTCTTCAG	-205084440	False	NA	-8	True	AATAAA	-25	NA	205084460	205083118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205083100_205084500
WTC11_00005586	chr1	-	7388	14	FSM	ENSG00000117222.14_ENSG00000174529.7	ENST00000264515.11	4367	14	0	-3021	0	8	multi-exon	FALSE	canonical	3	47	junction_1	15.1302041269468	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTTTTTCTGCTCTTC	-205118165	True	NA	-10	True	AATAAA	-23	NA	205121978	205083120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
WTC11_00005587	chr1	-	7296	14	FSM	ENSG00000117222.14_ENSG00000174529.7	ENST00000367164.1	4290	14	14	-3020	14	7	multi-exon	FALSE	canonical	3	42	junction_1	16.0984397788609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACCTTTTTCTGCTCTT	-205118188	True	NA	-11	True	AATAAA	-22	NA	205122001	205083121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
WTC11_00005589	chr1	-	8027	13	FSM	ENSG00000133059.17	ENST00000367162.8	8010	13	-9	-8	-9	8	multi-exon	TRUE	canonical	3	29	junction_3	4.91313432432789	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTTTGGTTT	-205211632	False	NA	-1	True	AATAAA	-25	NA	205211711	205142496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205147746_205148204_205148340_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
WTC11_00005590	chr1	-	3409	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	-18	0	18	multi-exon	FALSE	canonical	3	50	junction_1	5.66911711723165	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGACTGAGGTGGGGA	-205320043	True	NA	12	True	ATTAAA	-38	NA	205321745	205302044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
WTC11_00005592	chr1	-	6663	3	NIC	ENSG00000281406.2	novel	6454	3	NA	NA	-154	-14	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	4	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTATTATATCCCTTT	-205457231	False	NA	NA	False	AATAAA	-2	NA	205457245	205434898	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_205441063_205455916_205456036_205456865
WTC11_00005593	chr1	-	7492	2	NNC	ENSG00000158711.14	novel	10288	5	NA	NA	10252	175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACAACCTAGGTTGC	-205615404	False	NA	NA	False	NA	NA	NA	205615415	205597380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205597403_205607945
WTC11_00005595	chr1	-	10288	5	FSM	ENSG00000158711.14	ENST00000357992.9	10288	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	10.688779163216	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGAATTGATTATTTA	-205630059	True	NA	NA	False	AATAAA	-18	NA	205632011	205607942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205616645_205618956_205619074_205619965_205620839_205623675_205623892_205631631
WTC11_00005596	chr1	-	2140	3	FSM	ENSG00000158711.14	ENST00000289703.8	2118	3	0	-22	0	22	multi-exon	FALSE	canonical	3	57	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTAGTTTGTAAAAATAA	-205630010	False	NA	20	True	AATAAA	-40	NA	205631962	205619245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205620839_205623675_205623892_205631631
WTC11_00005597	chr1	-	2448	3	FSM	ENSG00000158715.6	ENST00000460934.1	2448	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	-205662527	False	NA	0	True	ATTAAA	-19	NA	205662668	205657850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205659672_205661860_205662127_205662307
WTC11_00005598	chr1	-	3391	5	FSM	ENSG00000158715.6	ENST00000367145.4	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6.72216482987438	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	-205679827	True	NA	0	True	ATTAAA	-19	NA	205680509	205657850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205680393
WTC11_00005600	chr1	-	6059	8	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	0	13529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.8935135260237	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCATTCCTTTTTATTG	-205742774	True	NA	NA	False	AAAAAG	-4	NA	205750182	205699292	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699324_205713192_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
WTC11_00005601	chr1	-	6402	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	-3	0	3	multi-exon	FALSE	canonical	3	50	junction_6	24.2859126976022	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGCATTCAATTCCA	-205742774	True	NA	2	True	AATAAA	-24	NA	205750182	205712818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
WTC11_00005608	chr1	-	1258	3	FSM	ENSG00000133065.11	ENST00000484228.1	2221	3	963	0	963	0	multi-exon	FALSE	canonical	3	101	junction_2	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGCACATGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	205795653	205790919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205791719_205794869_205795019_205795343
WTC11_00005609	chr1	-	2385	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	-21	0	21	multi-exon	FALSE	canonical	3	200	junction_1	86.9495383669299	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACCATATGCCAGAC	NA	False	NA	NA	False	AATAAA	-41	NA	206202839	206186157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
WTC11_00005610	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	110.882320001382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
WTC11_00005611	chr1	-	3772	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	162	junction_5	20.6317386337956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610238	True	NA	-6	True	AATAAA	-19	NA	206612453	206591641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
WTC11_00005612	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	60.2385881308651	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610244	True	NA	-6	True	AATAAA	-19	NA	206612459	206591641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
WTC11_00005613	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	19.8889775647575	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610250	True	NA	-6	True	AATAAA	-19	NA	206612465	206591641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
WTC11_00005618	chr1	-	6397	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGTATATTTTGGGAT	-207051181	False	NA	-1	True	AATAAA	-16	NA	207051208	207043847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_207049724_207050687
WTC11_00005619	chr1	-	1599	3	FSM	ENSG00000076356.7	ENST00000483048.1	2860	3	1261	0	1261	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAACAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	208029042	208026103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208027339_208028008_208028160_208028829
WTC11_00005622	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-209783908	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209783710_209784377
WTC11_00005623	chr1	-	4893	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	-415	0	415	multi-exon	FALSE	canonical	3	103	junction_2	9.7178958627884	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTCAGTAGACATGAAC	-209804074	True	NA	48	True	NA	NA	NA	209806142	209785201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
WTC11_00005624	chr1	-	4262	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	-6	0	0	multi-exon	FALSE	canonical	2	13	junction_6	39.53655130242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-209804107	True	NA	-2	True	AATAAA	-26	NA	209806175	209785616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
WTC11_00005627	chr1	-	5898	2	FSM	ENSG00000170385.10	ENST00000367001.5	5893	2	0	-5	0	5	multi-exon	FALSE	canonical	3	160	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATATGGCCTCCCC	-211577743	True	NA	1	True	AATAAA	-22	NA	211579161	211571562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211576290_211577990
WTC11_00005628	chr1	-	2135	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	-1	0	1	multi-exon	FALSE	canonical	3	108	junction_1	11.8321595661992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTCTTGCATTTGTT	-211673074	True	NA	1	True	AATAAA	-24	NA	211675621	211662770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
WTC11_00005629	chr1	-	2295	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-179	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	38.4144955633646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTATGTGTCTTGCATT	NA	False	NA	-3	True	AATAAA	-20	NA	211675809	211662774	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
WTC11_00005631	chr1	-	439	3	FSM	ENSG00000123684.13	ENST00000488600.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATACTTCAGCCCCTT	-211829679	True	NA	NA	False	NA	NA	NA	211830722	211829178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211829320_211830182_211830331_211830572
WTC11_00005632	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-212032943	True	NA	-5	True	AATAAA	-17	NA	212035557	211940402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
WTC11_00005633	chr1	-	3380	20	FSM	ENSG00000143493.13	ENST00000366992.7	3380	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAACTGGGATCCTGG	-212032906	True	NA	-22	True	AATAAA	-18	NA	212035520	211941355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211942112_211944783_211944970_211946606_211946646_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
WTC11_00005636	chr1	-	2579	16	ISM	ENSG00000143493.13	ENST00000366992.7	3380	20	0	24761	0	7	5prime_fragment	FALSE	canonical	3	131	junction_3	12.943295132573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTTGGCTTCTTAAA	-212032906	True	NA	-22	True	ATTAAA	-17	NA	212035520	211966116	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
WTC11_00005637	chr1	-	4076	15	NIC	ENSG00000143493.13	novel	3380	20	NA	NA	0	125	intron_retention	FALSE	canonical	3	131	junction_2	12.4670995595837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCCTATTATAGTAT	-212032906	True	NA	96	True	ATTAAA	-14	NA	212035520	211965998	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
WTC11_00005638	chr1	-	564	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	-81	0	81	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTCATATCCAACAAAA	-212051489	False	NA	NA	False	NA	NA	NA	212052006	212051442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212051400_212052000
WTC11_00005639	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	14.9734458837187	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-212412946	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
WTC11_00005643	chr1	-	1031	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	-145	-50	-145	50	multi-exon	FALSE	canonical	3	44	junction_1	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTGGCCACTCTCC	-212699735	True	NA	49	True	NA	NA	NA	212699985	212686366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212686980_212696960_212697066_212699672
WTC11_00005644	chr1	-	13334	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	1	-220	0	220	multi-exon	FALSE	canonical	3	388	junction_2	24.5519856630783	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATAGTTTATTTT	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212725932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
WTC11_00005645	chr1	-	722	5	FSM	ENSG00000117697.15	ENST00000366976.3	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	176.877605987869	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGCAAACTAAAGACTG	-212785393	True	NA	NA	False	NA	NA	NA	212791782	212738482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212738687_212782371_212782427_212784362_212784494_212787558_212787638_212791529
WTC11_00005646	chr1	-	790	7	FSM	ENSG00000117697.15	ENST00000626725.1	790	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	191.856717370021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAACTTTATAACAC	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212738561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212738687_212739533_212739602_212766188_212766274_212782371_212782427_212784362_212784494_212787558_212787638_212791529
WTC11_00005647	chr1	-	745	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	6	-66	0	66	multi-exon	FALSE	canonical	3	417	junction_1	21	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAGACAAGGATGGAAA	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212784074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212784494_212787558_212787638_212791529
WTC11_00005648	chr1	-	2031	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	55	-1144	0	9	multi-exon	FALSE	canonical	3	139	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAATTACCGTGAATAT	-212856458	True	NA	NA	False	AATAAA	-25	NA	212858083	212855459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212857173_212857765
WTC11_00005649	chr1	-	379	3	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	18.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCCTGACCCTGGTAGA	-212907795	False	NA	-16	True	AATAAA	-18	NA	212907835	212899510	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212899707_212907116_212907238_212907773
WTC11_00005650	chr1	-	7341	4	FSM	ENSG00000174606.14	ENST00000473303.1	2135	4	-2659	-2547	-2659	0	multi-exon	FALSE	canonical	3	206	junction_3	52.198339692625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213004877	False	NA	NA	False	AATAAA	-15	NA	213004893	212992181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785
WTC11_00005651	chr1	-	7743	3	ISM	ENSG00000174606.14	ENST00000473303.1	2135	4	-2659	-2547	-2659	0	intron_retention	FALSE	canonical	3	295	junction_2	17.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213004877	False	NA	NA	False	AATAAA	-15	NA	213004893	212992181	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_212995193_212997154_212997319_213000325
WTC11_00005652	chr1	-	4703	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	67.5248796740875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213013207	True	NA	NA	False	AATAAA	-15	NA	213015493	212992181	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
WTC11_00005653	chr1	-	4954	10	NNC	ENSG00000174606.14	novel	4690	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	107.098085883922	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213013207	True	NA	NA	False	AATAAA	-15	NA	213015493	212992181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213011207_213011459_213013092_213013419_213015225
WTC11_00005654	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	74.5334446741864	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213015424	False	NA	NA	False	AATAAA	-15	NA	213015867	212992181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
WTC11_00005658	chr1	-	13661	19	FSM	ENSG00000152104.12	ENST00000366956.10	13360	19	-301	0	-301	0	multi-exon	FALSE	canonical	3	32	junction_8	9.53939201416946	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACATCTTCTCTTTTCTG	-214551873	False	NA	-4	True	AATAAA	-19	NA	214551903	214348699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
WTC11_00005661	chr1	-	300	2	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCATTTACACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	216152697	216145760	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_216145905_216152541
WTC11_00005662	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	19.8270298106174	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-217628827	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
WTC11_00005663	chr1	-	3213	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	5	0	-5	multi-exon	FALSE	canonical	3	31	junction_1	12.9089116504839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGAGTTCCAATTTGTG	-217628819	True	NA	-12	True	AATAAA	-22	NA	217631082	217608188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
WTC11_00005665	chr1	-	594	1	ISM	ENSG00000215817.8	ENST00000651890.1	4769	2	3227	1315	3227	-1315	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGACTCCTTGAGGTG	NA	False	NA	NA	False	AAAAAG	-39	NA	219609918	219609324	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_219609300_219609900
WTC11_00005666	chr1	-	204	2	Genic_Genomic	ENSG00000215817.8	novel	4769	2	NA	NA	27	-4591	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGATCTTACTGAAAAAT	NA	False	NA	NA	False	AAGAAA	-16	NA	219613118	219612600	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_219612679_219612992
WTC11_00005668	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_18	124.085256515411	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	-220038987	True	NA	-5	True	AATAAA	-14	NA	220046505	219968599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
WTC11_00005670	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.96869555732605	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	-220088245	True	NA	NA	False	ATTAAA	-21	NA	220089788	220057481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
WTC11_00005671	chr1	-	2290	8	FSM	ENSG00000162813.18	ENST00000414869.6	2357	8	0	67	0	-65	multi-exon	FALSE	canonical	2	6	junction_5	20.6328448284352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAGATTTTTATTTTTA	-220088310	True	NA	NA	False	ATTAAA	-16	NA	220089853	220057548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220073966_220074072_220079726_220079855_220089685
WTC11_00005675	chr1	-	7270	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	-14	0	14	multi-exon	FALSE	canonical	0	0	junction_15	32.4873811009113	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCATAAGTATAACTAAC	-220264973	True	NA	-24	True	AATAAA	-28	NA	220272453	220148278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
WTC11_00005676	chr1	-	2469	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	120	0	-61	multi-exon	FALSE	canonical	2	4	junction_2	2.86744175568088	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATCAGAATGTAAGAAAA	-221741903	True	NA	NA	False	CATAAA	-15	NA	221742089	221701543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
WTC11_00005678	chr1	-	1901	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	9	0	9	0	multi-exon	TRUE	canonical	3	35	junction_4	12.6728055299527	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588743	True	NA	-3	True	AATAAA	-24	NA	222589924	222558311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
WTC11_00005679	chr1	-	1964	12	NNC	ENSG00000143498.18	novel	1910	11	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	25.387248702729	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTTATATTCTACT	-222588739	True	NA	-6	True	AATAAA	-21	NA	222589920	222558314	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222566473_222566526_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579891_222584127_222584298_222588442_222588566_222589726
WTC11_00005683	chr1	-	4868	1	FSM	ENSG00000272750.1	ENST00000608771.1	2646	1	-2431	209	-2431	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATATAACAAACTGCT	-222663929	False	NA	NA	False	NA	NA	NA	222663943	222659075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222659100_222663900
WTC11_00005684	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	22.4669853807485	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-222706844	True	NA	-7	True	ATTAAA	-16	NA	222712491	222668012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
WTC11_00005686	chr1	-	390	2	FSM	ENSG00000143502.16	ENST00000484503.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCAGGTCAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	223229450	223227602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223227739_223229196
WTC11_00005687	chr1	-	1056	6	FSM	ENSG00000143502.16	ENST00000344029.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.45527267879434	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATTTTTATCCTATA	-223363965	True	NA	-18	True	AATAAA	-17	NA	223364167	223234914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
WTC11_00005688	chr1	-	4758	19	FSM	ENSG00000143514.17	ENST00000391878.6	4741	19	0	-17	0	11	multi-exon	FALSE	canonical	2	14	junction_17	67.0909876010478	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATTTTACCTAGAGCC	-223842881	True	NA	-10	True	AATAAA	-33	NA	223845930	223779881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223818205_223818338_223821219_223821368_223845653
WTC11_00005689	chr1	-	5429	18	FSM	ENSG00000143514.17	ENST00000343537.12	4632	18	-786	-11	-779	11	multi-exon	FALSE	canonical	3	186	junction_9	20.0702917018298	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATTTTACCTAGAGCC	NA	False	NA	-10	True	AATAAA	-33	NA	223846733	223779881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223821219_223821368_223845653
WTC11_00005692	chr1	-	2781	14	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	34	-36	intron_retention	FALSE	canonical	1	1	junction_7	16.180929676848	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAATATTTCCACCATT	-223991470	True	NA	-41	True	TATAAA	-17	NA	223992560	223951429	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223952384_223952443_223952667_223952868_223954476_223954668_223961167_223961233_223962076_223962274_223962610_223962709_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
WTC11_00005693	chr1	-	231	1	FSM	ENSG00000236773.1	ENST00000415453.1	231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTTACAGGTGAATTC	-224175676	False	NA	NA	False	NA	NA	NA	224175706	224175475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224175500_224175700
WTC11_00005695	chr1	-	591	4	FSM	ENSG00000143748.18	ENST00000481213.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	121.647030378879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-224233277	True	NA	1	True	AATAAA	-29	NA	224233289	224227333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224232088_224232183_224233200
WTC11_00005698	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_21	30.9661507832515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-224325984	True	NA	1	True	AATAAA	-29	NA	224330170	224227333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
WTC11_00005699	chr1	-	3006	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	-3	0	0	multi-exon	FALSE	canonical	3	28	junction_15	68.9591259994001	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-224326003	True	NA	1	True	AATAAA	-29	NA	224330189	224227333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
WTC11_00005701	chr1	-	2932	24	NIC	ENSG00000143748.18	novel	3003	24	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_19	73.448437477348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATAAAACTTTTACTT	-224325946	True	NA	-37	True	AATAAA	-16	NA	224330132	224227371	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224313049_224313152_224317693_224317794_224317877_224317931_224326390_224326465_224330070
WTC11_00005705	chr1	-	1961	14	ISM	ENSG00000143748.18	ENST00000482491.5	3003	24	61	61843	0	5	5prime_fragment	FALSE	canonical	3	28	junction_5	89.5623150885665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCATTTGTATACATG	-224325942	True	NA	NA	False	ATTAAA	-19	NA	224330128	224289179	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
WTC11_00005712	chr1	-	7371	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	-4	0	4	multi-exon	FALSE	canonical	3	22	junction_11	24.6701314267959	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTGTTACATCTCC	-224432920	True	NA	NA	False	AATAAA	-22	NA	224434797	224385141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
WTC11_00005713	chr1	-	6521	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	0	-19	0	4	multi-exon	FALSE	canonical	3	23	junction_11	24.5402700081113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTGTTACATCTCC	-224432118	False	NA	NA	False	AATAAA	-22	NA	224433995	224385141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
WTC11_00005714	chr1	-	1967	6	ISM	ENSG00000162923.17	ENST00000480676.2	1725	9	9786	3518	-679	0	internal_fragment	FALSE	canonical	3	80	junction_5	7.83836717690617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAACAGCACAATTTTTT	-224401678	False	NA	-66	True	AAAAAG	-38	NA	224401698	224389183	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949
WTC11_00005716	chr1	-	1550	3	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTAGTGGTCTCTTCA	-224845467	True	NA	0	True	AATAAA	-23	NA	224845772	224839965	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_224840335_224843637_224844582_224845535
WTC11_00005717	chr1	-	3750	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	-2	0	2	multi-exon	FALSE	canonical	3	574	junction_2	65.9230320437869	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGCCTTTTTTTTTTCC	-225416920	True	NA	-4	True	AATAAA	-23	NA	225428038	225401499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
WTC11_00005719	chr1	-	478	3	FSM	ENSG00000143815.15	ENST00000424022.2	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_2	21.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTAGCTCAGTTTGAAG	-225411403	False	27	NA	False	NA	NA	NA	225411417	225406561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225406833_225410290_225410417_225411336
WTC11_00005721	chr1	-	13174	15	FSM	ENSG00000154380.18	ENST00000366844.7	13168	15	0	-6	0	0	multi-exon	TRUE	canonical	3	338	junction_9	56.72346093468	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTTGTATTTATTTTA	-225640912	True	NA	-2	True	AATAAA	-23	NA	225653142	225486828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
WTC11_00005724	chr1	-	8123	14	FSM	ENSG00000154380.18	ENST00000366843.7	13092	14	407	4562	0	4089	multi-exon	FALSE	canonical	3	80	junction_3	107.390400990275	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCAGATCACCTGAGGTC	-225652636	False	118	NA	False	NA	NA	NA	225652716	225491390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
WTC11_00005727	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_17	41.2838875955257	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225877045	True	NA	-12	True	AGTAAA	-17	NA	225882380	225845535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
WTC11_00005728	chr1	-	789	2	FSM	ENSG00000196187.12	ENST00000496025.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGTCCAGGTCTGAGG	-225847452	False	NA	2	True	NA	NA	NA	225847465	225846575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225846933_225847033
WTC11_00005730	chr1	-	1653	5	NNC	ENSG00000243709.1	novel	1626	4	NA	NA	0	27967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.468831613293	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGTATAGGTAATGA	-225887414	True	NA	NA	False	AAAACA	-3	NA	225889146	225858314	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225858343_225886282_225887091_225887398_225887639_225887785_225888033_225888816
WTC11_00005731	chr1	-	634	3	FSM	ENSG00000196187.12	ENST00000483779.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGAAGACAGGCCAGC	-225866400	False	NA	NA	False	NA	NA	NA	225866410	225862539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225862579_225862770_225862852_225865896
WTC11_00005733	chr1	-	1626	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	37.6061460697879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-225887414	True	NA	-9	True	AATAAA	-38	NA	225889146	225886281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
WTC11_00005735	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	428.279276744613	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908514	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
WTC11_00005736	chr1	-	3149	5	FSM	ENSG00000143811.20	ENST00000478402.5	3149	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	496.996164472121	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908542	True	NA	-3	True	AATAAA	-18	NA	225924278	225919877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225923772_225924043
WTC11_00005739	chr1	-	850	3	FSM	ENSG00000143811.20	ENST00000472798.2	422	3	-428	0	21	0	multi-exon	FALSE	canonical	3	1133	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTAGTGCAGGA	-225908583	True	NA	NA	False	NA	NA	NA	225924319	225922028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225922080_225922203_225922384_225923700
WTC11_00005741	chr1	-	343	2	FSM	ENSG00000248322.1	ENST00000513672.1	342	2	0	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTCTTTAGTTTATG	-225937531	False	NA	1	True	ATTAAA	-15	NA	225937557	225936409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225936578_225937382
WTC11_00005742	chr1	-	2160	4	NNC	ENSG00000143768.13	novel	2019	4	NA	NA	12	-3	intron_retention	FALSE	canonical	2	27	junction_1	124.111061374704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTGTCTGTTTTTA	-225939449	True	NA	-8	True	AATAAA	-11	NA	225941208	225936605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225937961_225939360_225939601_225939755_225940003_225940890
WTC11_00005743	chr1	-	2024	4	FSM	ENSG00000143768.13	ENST00000366820.10	2019	4	0	-5	0	0	multi-exon	FALSE	canonical	3	177	junction_3	65.5031805843553	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTTAATTTCCAG	-225939461	True	NA	0	True	AATAAA	-19	NA	225941220	225936597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225937805_225939360_225939601_225939755_225940003_225940890
WTC11_00005744	chr1	-	3988	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	-1	0	1	multi-exon	TRUE	canonical	3	100	junction_1	15.6808446484521	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATTTCTAATATTCTT	-225994934	True	NA	-5	True	AATAAA	-24	NA	225999343	225982700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
WTC11_00005745	chr1	-	3600	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	-16	0	16	multi-exon	FALSE	canonical	3	290	junction_5	31.9195417081314	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATAGTTACTCTCTGAA	-226179315	True	NA	16	True	ATTAAA	-31	NA	226186741	226144662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
WTC11_00005746	chr1	-	3001	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	-3	0	3	multi-exon	FALSE	canonical	3	91	junction_4	21.2559715499107	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATATTTTCATTTAA	-226307503	True	NA	3	True	AATAAA	-21	NA	226309164	226231153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
WTC11_00005747	chr1	-	2904	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	5	0	3	multi-exon	FALSE	canonical	3	27	junction_11	33.0606399992463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATATTTTCATTTAA	-226307511	True	NA	3	True	AATAAA	-21	NA	226309172	226231153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
WTC11_00005748	chr1	-	3186	15	FSM	ENSG00000183814.16	ENST00000366808.6	3186	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	36.3936106749411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226309846	False	NA	0	True	AATAAA	-18	NA	226309869	226231156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309625
WTC11_00005749	chr1	-	2454	13	NIC	ENSG00000183814.16	novel	2998	15	NA	NA	11	636	intron_retention	FALSE	canonical	3	9	junction_4	38.0960044565773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACTCCACTTGATTTA	-226307492	True	NA	NA	False	NA	NA	NA	226309153	226232076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
WTC11_00005756	chr1	-	407	4	FSM	ENSG00000143799.14	ENST00000469663.1	542	4	135	0	135	0	multi-exon	FALSE	canonical	1	25	junction_3	1060.75099182922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	-226392227	False	NA	25	True	AAGAAA	-7	NA	226392657	226388697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226388756_226390409_226390625_226392198_226392315_226392639
WTC11_00005757	chr1	-	235	1	FSM	ENSG00000177770.11	ENST00000460287.2	302	1	239	-172	239	172	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTAGTTATCACTGTAA	NA	False	NA	NA	False	NA	NA	NA	226493250	226493015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226493000_226493200
WTC11_00005759	chr1	-	10619	37	FSM	ENSG00000143776.20	ENST00000366766.8	10978	37	367	-8	349	8	multi-exon	FALSE	canonical	3	5	junction_15	11.5334657988539	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCTCTTTTCCCCC	-227318105	False	NA	2	True	AATAAA	-23	NA	227318125	226989856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226994400_226994822_226994981_227004993_227005112_227016079_227016198_227016926_227017051_227023262_227023348_227026054_227026153_227028656_227029251_227030407_227030471_227031297_227031515_227033333_227033416_227034654_227034795_227035470_227035608_227040130_227040237_227047926_227048011_227051880_227051986_227069776_227069854_227072207_227072300_227073863_227074013_227074258_227074365_227080892_227081018_227091885_227091992_227100991_227101240_227112311_227112423_227112670_227112914_227119803_227119938_227129108_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
WTC11_00005763	chr1	-	3586	2	FSM	ENSG00000081692.13	ENST00000485807.1	3749	2	29	134	23	-134	multi-exon	TRUE	canonical	3	104	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAGCTCTGTGGGGGGA	-227732481	False	NA	NA	False	AAAACA	-8	NA	227734348	227730558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227732677_227732880
WTC11_00005764	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	11.3736537664903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-227733435	True	NA	-1	True	AATGAA	-15	NA	227735302	227731190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
WTC11_00005765	chr1	-	2502	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.4092501589709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	-227733544	False	NA	-12	True	NA	NA	NA	227735411	227731233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
WTC11_00005766	chr1	-	891	4	FSM	ENSG00000081692.13	ENST00000480590.1	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	5.73488351136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGCCCTCTTGGCTGCA	-227733209	False	NA	NA	False	NA	NA	NA	227735076	227733147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227733682_227733906_227734033_227734650_227734817_227735011
WTC11_00005772	chr1	-	1050	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	45	-357	0	351	multi-exon	FALSE	canonical	3	254	junction_3	211.354412066557	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCTCCCTGCCCTGG	-228105187	True	NA	NA	False	NA	NA	NA	228109254	228106327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
WTC11_00005773	chr1	-	979	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	4	-351	0	351	multi-exon	FALSE	canonical	3	147	junction_4	257.405322400295	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCTCCCTGCCCTGG	-228105228	True	NA	NA	False	NA	NA	NA	228109295	228106327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
WTC11_00005774	chr1	-	834	4	FSM	ENSG00000162910.19	ENST00000366733.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	273.081591389012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108734	False	NA	1	True	NA	NA	NA	228108744	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436
WTC11_00005777	chr1	-	641	5	FSM	ENSG00000162910.19	ENST00000366739.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	300.90727392338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228109021	False	NA	1	True	NA	NA	NA	228109031	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954
WTC11_00005780	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	286.329646852481	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105216	True	NA	1	True	NA	NA	NA	228109283	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
WTC11_00005781	chr1	-	673	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	-8	0	0	multi-exon	FALSE	canonical	3	18	junction_3	308.30180018936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
WTC11_00005782	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
WTC11_00005783	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	314.774345982783	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
WTC11_00005784	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	317.917442113515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105239	True	NA	1	True	NA	NA	NA	228109306	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
WTC11_00005785	chr1	-	722	5	NIC	ENSG00000162910.19	novel	738	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	274.007641316807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-228105213	True	NA	-5	True	NA	NA	NA	228109280	228106684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_228106919_228107667_228107870_228108234_228108322_228108954_228109022_228109148
WTC11_00005790	chr1	-	2706	7	NNC	ENSG00000154370.16	novel	2710	6	NA	NA	0	9197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.159457361284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATTATTAGTTTG	-228404978	True	NA	NA	False	NA	NA	NA	228406800	228384475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_228384507_228393675_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
WTC11_00005791	chr1	-	2713	6	FSM	ENSG00000154370.16	ENST00000284551.11	2710	6	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.0618592076004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTGGTGCCTGCTTA	-228405013	True	NA	-1	True	AATAAA	-23	NA	228406835	228393672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
WTC11_00005795	chr1	-	902	6	FSM	ENSG00000162931.12	ENST00000479800.1	925	6	23	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	3.03315017762062	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGGCACCCAGGGCC	-228416162	False	NA	NA	False	NA	NA	NA	228416630	228409171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228409276_228409388_228409412_228410945_228411177_228413796_228413893_228414643_228415000_228416538
WTC11_00005798	chr1	-	5089	3	FSM	ENSG00000154429.11	ENST00000366687.5	5089	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTCTTTTGTGAGAA	-229340986	True	NA	NA	False	AATAAA	-19	NA	229342517	229321010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229325412_229326737_229327007_229342098
WTC11_00005800	chr1	-	5337	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	15	-144	0	144	multi-exon	FALSE	canonical	3	270	junction_19	40.4009108808205	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGACTTGGAAAAGGT	-229502759	True	NA	NA	False	NA	NA	NA	229508326	229440114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
WTC11_00005801	chr1	-	779	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.243363828062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGAATGGCTGAAGC	-229502759	True	NA	NA	False	AAGAAA	-42	NA	229508326	229499166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
WTC11_00005803	chr1	-	512	4	FSM	ENSG00000135776.5	ENST00000486755.1	612	4	100	0	100	0	multi-exon	FALSE	canonical	3	119	junction_2	15.556349186104	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTCTGTGACCGCT	NA	False	NA	NA	False	NA	NA	NA	229531802	229526061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229526117_229527228_229527309_229530198_229530409_229531635
WTC11_00005806	chr1	-	2410	5	NNC	ENSG00000135801.10	novel	4062	4	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.9880918618154	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTAGCTTCTGTTGT	-229624103	True	NA	-3	True	AATAAA	-17	NA	229626043	229599192	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_229600469_229602194_229602920_229610105_229610211_229614340_229614486_229625884
WTC11_00005807	chr1	-	4140	4	FSM	ENSG00000135801.10	ENST00000366675.3	4062	4	-77	-1	0	1	multi-exon	FALSE	canonical	3	49	junction_3	8.5764535535124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTAGCTTCTGTTGT	-229624107	True	NA	-3	True	AATAAA	-17	NA	229626047	229599192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229602920_229610105_229610211_229614340_229614486_229625884
WTC11_00005810	chr1	-	3726	4	FSM	ENSG00000119280.17	ENST00000366663.10	3726	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_2	4.18993502999218	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTGTGATGGGCCT	-230862924	True	NA	-12	True	AATAAA	-19	NA	230868521	230837118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_230839909_230843353_230843897_230855667_230855719_230868179
WTC11_00005813	chr1	-	1523	2	FSM	ENSG00000182118.8	ENST00000366654.5	1503	2	14	-34	14	34	multi-exon	FALSE	canonical	3	28	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAACTTTCATGACTTGA	-231040088	True	NA	32	True	NA	NA	NA	231040240	231018923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231020127_231039920
WTC11_00005814	chr1	-	1433	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	-3	0	1	multi-exon	FALSE	canonical	3	86	junction_5	31.0559530882925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTGTGACTGTTAAGTA	-231239813	True	NA	-2	True	AATAAA	-18	NA	231241175	231223761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
WTC11_00005815	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	2	0	0	multi-exon	FALSE	canonical	3	94	junction_5	28.4648906549806	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-231239816	True	NA	-5	True	AATAAA	-15	NA	231241178	231223764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
WTC11_00005819	chr1	-	4340	5	FSM	ENSG00000135766.9	ENST00000366641.4	4335	5	0	-5	0	0	multi-exon	FALSE	canonical	3	157	junction_3	9.06573218223437	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTATTTCCAGCTGT	-231421047	True	NA	0	True	ATTAAA	-29	NA	231422287	231363750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231366476_231367568_231367637_231370561_231370699_231373979_231374100_231420997
WTC11_00005820	chr1	-	4709	4	FSM	ENSG00000135766.9	ENST00000667629.1	3108	4	-1147	-454	-52	454	multi-exon	FALSE	canonical	2	10	junction_2	78.291478179656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATATATCTGTTATTT	-231421099	True	NA	NA	False	ACTAAA	-37	NA	231422339	231363296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231366476_231367568_231367637_231373979_231374100_231420997
WTC11_00005827	chr1	-	6880	22	NIC	ENSG00000116991.12	novel	6914	23	NA	NA	-5	15	combination_of_known_junctions	TRUE	canonical	3	31	junction_21	11.0922742822576	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTTTTGTGATCTA	-232628481	True	NA	NA	False	AATAAA	-42	NA	232630138	232397949	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232574173_232574223_232629868
WTC11_00005828	chr1	-	6770	21	NIC	ENSG00000116991.12	novel	6914	23	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_20	11.6430236622623	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTGTCAGGTGACTAGA	-232630074	False	NA	NA	False	AATAAA	-28	NA	232630091	232397963	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232629868
WTC11_00005830	chr1	-	5204	10	FSM	ENSG00000135749.19	ENST00000344698.6	5348	10	144	0	144	0	multi-exon	TRUE	canonical	3	29	junction_7	13.0809445802324	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	233058374	232984135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_232986541_232998250_232998439_232999104_232999380_233000304_233000536_233001536_233001682_233014664_233014778_233016920_233017155_233025145_233025400_233054267_233054484_233057231
WTC11_00005832	chr1	-	766	4	FSM	ENSG00000135749.19	ENST00000520463.1	766	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.7156650905785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAGTTACTGAATGACCC	-233160406	True	NA	NA	False	NA	NA	NA	233160425	233125903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_233126207_233135012_233135191_233139713_233139856_233160282
WTC11_00005835	chr1	-	4084	21	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	0	151578	0	0	5prime_fragment	FALSE	canonical	2	64	junction_19	16.7608919810373	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGAATTAGCTATTTT	-233290029	True	NA	NA	False	NA	NA	NA	233295725	233135012	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
WTC11_00005836	chr1	-	3929	19	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	13	176670	13	142	5prime_fragment	FALSE	canonical	2	64	junction_17	16.9021329649672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGAGTATATGGTATTT	-233290016	True	NA	NA	False	AATAAA	-23	NA	233295712	233160104	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
WTC11_00005840	chr1	-	482	1	FSM	ENSG00000235605.1	ENST00000422958.1	438	1	-18	-26	-18	26	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTCCAAAAAAAAAAAAAAA	-234356658	True	NA	NA	False	AATAAA	-11	NA	234357159	234356677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234356700_234357200
WTC11_00005843	chr1	-	3832	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	-2182	0	-607	0	multi-exon	FALSE	canonical	3	17	junction_5	54.2631532065578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	1	True	AATAAA	-20	NA	234408562	234391377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
WTC11_00005844	chr1	-	873	5	FSM	ENSG00000059588.10	ENST00000496673.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	47.9192028314328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTTAATAAACACTTTT	-234401206	False	NA	-31	True	NA	NA	NA	234401216	234391409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234391746_234392415_234392553_234393645_234393838_234398381_234398554_234401180
WTC11_00005845	chr1	-	5199	30	NNC	ENSG00000059588.10	novel	5206	30	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_20	25.1411236797621	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATTTCCTAGAAAC	-234478610	True	NA	-7	True	AATAAA	-20	NA	234479179	234391316	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234401180_234401263_234405902_234406100_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448577_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
WTC11_00005848	chr1	-	4615	2	FSM	ENSG00000168264.11	ENST00000366610.7	4615	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGAGGCCTTTTTT	-234609508	False	NA	-6	True	AATAAA	-22	NA	234609525	234604268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234607853_234608494
WTC11_00005849	chr1	-	5316	2	FSM	ENSG00000168264.11	ENST00000366609.4	5316	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGAGGCCTTTTTT	-234605093	True	NA	-6	True	AATAAA	-22	NA	234610178	234604268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234607853_234608446
WTC11_00005850	chr1	-	1912	12	NNC	ENSG00000188739.15	novel	1847	11	NA	NA	0	101127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.692416355038	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTAGCGTTACAGGAAGC	-235149519	True	NA	NA	False	AAAAAG	-4	NA	235161283	235030055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_235030091_235131185_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
WTC11_00005861	chr1	-	5847	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	51	-87	0	87	multi-exon	FALSE	canonical	3	19	junction_7	30.2116500981474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGATTAATTGATACACA	-235324092	True	NA	88	True	NA	NA	NA	235328168	235166807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
WTC11_00005862	chr1	-	6018	24	FSM	ENSG00000054267.22	ENST00000264183.9	6022	24	11	-7	0	0	multi-exon	FALSE	canonical	3	79	junction_8	23.1246315047532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	-235324092	True	NA	1	True	AATAAA	-25	NA	235328168	235166894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235213768_235214027_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
WTC11_00005866	chr1	-	2033	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	0	-814	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	73.0518746432211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCAAGTTATTTTATA	-235501521	True	NA	NA	False	AAGAAA	-34	NA	235504422	235449968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
WTC11_00005867	chr1	-	4731	12	FSM	ENSG00000162885.14	ENST00000366600.8	4719	12	0	-12	0	12	multi-exon	FALSE	canonical	3	152	junction_9	32.5225922746706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATAATTTTAATTAAC	-235501551	True	NA	NA	False	AATAAA	-38	NA	235504452	235447177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
WTC11_00005879	chr1	-	654	4	FSM	ENSG00000119285.11	ENST00000483073.1	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	25.703436864876	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTGTAAGATAAGT	-236599605	False	11034	NA	False	AATAAA	-15	NA	236599620	236595771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236596045_236596835_236596977_236597877_236597980_236599482
WTC11_00005880	chr1	-	793	3	FSM	ENSG00000119285.11	ENST00000366579.1	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCCAAGTAGCTGGGA	-236593454	True	NA	NA	False	NA	NA	NA	236604488	236602824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236603377_236603953_236604128_236604421
WTC11_00005882	chr1	-	5583	1	FSM	ENSG00000215808.4	ENST00000649681.1	5583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTATAACTTTTAAATAAA	-238485065	True	NA	-76	True	AGTAAA	-28	NA	238486023	238480440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_238480400_238486000
WTC11_00005886	chr1	-	3012	6	FSM	ENSG00000091483.8	ENST00000684161.1	2995	6	0	-17	0	17	multi-exon	FALSE	canonical	3	516	junction_5	85.8123534230358	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATATTTGTGCATGTTG	-241505136	False	NA	25	True	NA	NA	NA	241510555	241497563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602
WTC11_00005887	chr1	-	1821	10	FSM	ENSG00000091483.8	ENST00000684483.1	1818	10	7	-10	7	10	multi-exon	FALSE	canonical	1	15	junction_6	189.199352699021	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTATGATATTTGTG	-241514359	True	NA	18	True	AAAACA	-41	NA	241519778	241497570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508761_241511966_241512144_241513602_241513714_241517181_241517317_241519590
WTC11_00005889	chr1	-	3617	9	FSM	ENSG00000091483.8	ENST00000683521.1	3166	9	105	-556	0	-543	multi-exon	FALSE	canonical	3	508	junction_8	42.3923268410688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTAAGTGTTTATTT	-241514275	True	NA	NA	False	NA	NA	NA	241519694	241498181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
WTC11_00005892	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	36.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	-241636548	True	NA	2	True	AATAAA	-26	NA	241640355	241593601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241594692_241597745_241597998_241639881
WTC11_00005893	chr1	-	7711	2	FSM	ENSG00000203668.3	ENST00000366553.3	7711	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGAGAAAATTACTGAT	-241636562	True	NA	-7	True	AATAAA	-36	NA	241640369	241628850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241636074_241639881
WTC11_00005896	chr1	-	8688	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	0	212	0	-212	multi-exon	FALSE	canonical	2	7	junction_2	4.55691036764664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCACCGTAATGGTGACT	-242524617	True	NA	NA	False	AGTAAA	-32	NA	242524697	242083197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
WTC11_00005897	chr1	-	1134	6	FSM	ENSG00000180287.17	ENST00000467561.5	1353	6	169	50	169	-50	multi-exon	FALSE	canonical	1	3	junction_2	6.40624695121879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTTCCCTTTCT	-242524477	False	NA	NA	False	AATGAA	-25	NA	242524502	242124467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_242124666_242219987_242220116_242265361_242265449_242288361_242288531_242348105_242348243_242524087
WTC11_00005898	chr1	-	1210	3	NNC	ENSG00000180287.17	novel	8900	10	NA	NA	274	-224216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAAGTAATTATTTT	-242523825	True	NA	NA	False	AATAAA	-18	NA	242524397	242489552	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_242490359_242491187_242491282_242524087
WTC11_00005900	chr1	-	7155	20	NNC	ENSG00000143702.16	novel	7059	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	71	junction_11	32.4684376892911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATGATTGTATATTTT	NA	False	NA	-10	True	AATAAA	-17	NA	243255348	243124428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142285_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200833_243211882_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00005903	chr1	-	2174	4	FSM	ENSG00000143702.16	ENST00000522522.5	1180	4	-442	-552	-325	552	multi-exon	FALSE	canonical	3	119	junction_3	21.013223349966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGCAACAGAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	243255673	243210660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00005904	chr1	-	502	4	ISM	ENSG00000143702.16	ENST00000522191.5	561	6	-21	11226	-21	55	5prime_fragment	FALSE	canonical	1	2	junction_3	76.1416808033258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTCTGGTTTAAGTTAA	-243253760	False	NA	NA	False	ATTAAA	-15	NA	243254491	243211839	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_243211965_243221723_243221814_243225175_243225322_243254350
WTC11_00005906	chr1	-	6120	5	FSM	ENSG00000117020.19	ENST00000679831.1	7950	5	1830	0	1830	0	multi-exon	FALSE	canonical	3	15	junction_4	3.16227766016838	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAAAAGTAAGTT	NA	False	NA	-36	True	NA	NA	NA	243563848	243499749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243505335_243512323_243512427_243545509_243545598_243552728_243552944_243563719
WTC11_00005907	chr1	-	5343	3	FSM	ENSG00000117020.19	ENST00000681055.1	5343	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATATAGATCATGAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	243545648	243500233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243505335_243512323_243512427_243545509
WTC11_00005908	chr1	-	543	5	FSM	ENSG00000117020.19	ENST00000552631.2	557	5	0	14	0	-14	multi-exon	FALSE	canonical	1	3	junction_3	4.58257569495584	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAAAATAATAACTTATT	-243850002	False	NA	NA	False	CATAAA	-7	NA	243850041	243645892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243646038_243664771_243664884_243695590_243695717_243843124_243843283_243850039
WTC11_00005909	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_9	39.0941704946744	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	-244444397	True	NA	-3	True	ATTAAA	-21	NA	244451909	244408493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
WTC11_00005910	chr1	-	729	4	FSM	ENSG00000035687.10	ENST00000468215.1	807	4	78	0	78	0	multi-exon	FALSE	canonical	3	692	junction_3	20.757863302587	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAAGGGCGTTTAAAG	-244419153	False	NA	NA	False	AATATA	-32	NA	244419195	244411366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244411437_244415980_244416079_244417627_244417753_244418759
WTC11_00005911	chr1	-	381	1	FSM	ENSG00000232059.3	ENST00000595491.1	289	1	-67	-25	-67	25	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATGTTCCGGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	244694787	244694406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244694400_244694800
WTC11_00005912	chr1	-	12852	2	FSM	ENSG00000153187.20	ENST00000366527.4	12852	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTATTCCATTTTTTC	-244854682	False	NA	-2	True	AATAAA	-23	NA	244854748	244840637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244845345_244846603
WTC11_00005913	chr1	-	6827	14	FSM	ENSG00000153187.20	ENST00000444376.7	6827	14	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	760.962004043325	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-244864494	False	NA	-3	True	ATTAAA	-19	NA	244864560	244850296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
WTC11_00005914	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	933	junction_13	1074.42639712557	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-244759756	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
WTC11_00005916	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	749.468195715394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	-244863040	False	NA	-40	True	AAGAAA	-37	NA	244863106	244853405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
WTC11_00005921	chr1	-	1069	6	FSM	ENSG00000153187.20	ENST00000483966.3	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	3643	junction_4	390.5578574296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTGGTCTGTTTTT	-244859308	False	NA	NA	False	ATTAAA	-22	NA	244859374	244856282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274
WTC11_00005926	chr1	-	1452	11	NIC	ENSG00000185420.19	novel	1565	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	66.7479587702875	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	-246503519	True	NA	-15	True	AATAAA	-18	NA	246507279	245749350	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_245749665_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
WTC11_00005930	chr1	-	1810	9	NNC	ENSG00000162851.8	novel	1784	8	NA	NA	0	82122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.3341603252756	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTTTTCTACTTGAA	-246562898	True	NA	NA	False	NA	NA	NA	246566261	246458438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_246458465_246540560_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
WTC11_00005931	chr1	-	1810	9	NNC	ENSG00000162851.8	novel	1784	8	NA	NA	0	81947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.3341603252756	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGCGCGGTGGTGG	-246562898	True	NA	NA	False	AATACA	-26	NA	246566261	246458613	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_246458640_246540560_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
WTC11_00005933	chr1	-	1373	6	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	97	-11	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	57.7359506720033	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAGAAGATTTTGTG	-246562801	True	NA	NA	False	ATTAAA	-6	NA	246566164	246540571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246564345_246564435_246565825
WTC11_00005935	chr1	-	5935	10	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	66474	0	-591	0	3prime_fragment	FALSE	canonical	3	206	junction_7	30.0702880302504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTACAACATTTTA	NA	False	NA	-14	True	AATAAA	-18	NA	246864889	246839097	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923
WTC11_00005937	chr1	-	8751	36	FSM	ENSG00000153207.16	ENST00000366508.5	8751	36	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_35	44.8914882164282	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTACAACATTTTA	-246931351	False	NA	-14	True	AATAAA	-18	NA	246931363	246839097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923_246864117_246867243_246867352_246867660_246867812_246876036_246876188_246876949_246877082_246877157_246877303_246885492_246885681_246887210_246887358_246888176_246888234_246888393_246888518_246889965_246890060_246890955_246891061_246891778_246891920_246894658_246894749_246895834_246895926_246898207_246898337_246899450_246899513_246900064_246900247_246900336_246900470_246902524_246902676_246903948_246904034_246905540_246905658_246907550_246907759_246913231_246913413_246916141_246916396_246918249_246918378_246931128
WTC11_00005938	chr1	-	8899	36	FSM	ENSG00000153207.16	ENST00000648844.2	8887	36	0	-12	0	12	multi-exon	FALSE	canonical	3	183	junction_32	27.2378787870188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAGGATAGCGCATG	-246924192	True	NA	-2	True	AATAAA	-30	NA	246931948	246839085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923_246864117_246867243_246867352_246867660_246867812_246876036_246876188_246876949_246877082_246877157_246877303_246885492_246885681_246887210_246887358_246888176_246888234_246888393_246888518_246889965_246890060_246890955_246891061_246891778_246891920_246894658_246894749_246895834_246895926_246898207_246898337_246899450_246899513_246900064_246900247_246900336_246900470_246902524_246902676_246903948_246904034_246905540_246905658_246907550_246907759_246913231_246913413_246916141_246916396_246918249_246918378_246931577
WTC11_00005939	chr1	-	864	6	FSM	ENSG00000197472.15	ENST00000366504.6	862	6	0	-2	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.7713310357523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTTTCTTTTTT	-247003185	True	NA	88	True	AATAGA	-20	NA	247007999	246945546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
WTC11_00005942	chr1	-	806	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	20	0	-16	0	multi-exon	FALSE	canonical	1	1	junction_2	76.5365272272005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	-247003259	True	NA	-40	True	ATTAAA	-15	NA	247008073	246945674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
WTC11_00005944	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	45.7116566704332	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-247003243	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
WTC11_00005949	chr1	-	3081	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	18	-323	0	323	multi-exon	FALSE	canonical	3	30	junction_1	44.2894519672072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGTAATGAAGTGTA	-247171863	True	NA	NA	False	AAAACA	-27	NA	247172002	247154665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
WTC11_00005950	chr1	-	2572	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	14	-912	0	0	multi-exon	FALSE	canonical	3	50	junction_1	35.1093529798922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-247171863	True	NA	-31	True	AATAAA	-19	NA	247172002	247154988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
WTC11_00005953	chr1	-	5336	9	FSM	ENSG00000162714.13	ENST00000294753.8	5336	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	28.9133943873769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTAGGCTTTTCATTT	-247331733	False	NA	-2	True	AATAAA	-19	NA	247331743	247297411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431
WTC11_00005954	chr1	-	5318	10	FSM	ENSG00000162714.13	ENST00000682384.1	5315	10	0	-3	0	0	multi-exon	FALSE	canonical	3	237	junction_9	31.6824522058785	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTAGGCTTTTCATTT	-247326222	True	NA	-2	True	AATAAA	-19	NA	247331867	247297411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
WTC11_00005959	chr1	-	2031	8	FSM	ENSG00000171163.16	ENST00000533927.5	2026	8	0	-5	0	2	multi-exon	FALSE	canonical	0	0	junction_5	73.9801407439172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGGCAGAGCAAGTGT	-248857874	False	NA	0	True	AATAAA	-19	NA	248857884	248850003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855947_248856287_248856423_248856513_248856563_248857233
WTC11_00005960	chr1	-	1946	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	-4	0	2	multi-exon	FALSE	canonical	0	0	junction_6	61.6887682826575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGGCAGAGCAAGTGT	-248857418	True	NA	0	True	AATAAA	-19	NA	248859085	248850003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
WTC11_00005962	chr1	-	1245	5	ISM	ENSG00000171163.16	ENST00000474351.5	867	6	89	-378	-54	0	intron_retention	FALSE	canonical	3	168	junction_3	29.8360101219986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTGGGCAGAGCAAGT	-248855987	False	NA	-2	True	AATAAA	-17	NA	248855997	248850005	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557
WTC11_00005979	chr1	+	663	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAATGCCAATATCCCA	NA	False	NA	NA	False	NA	NA	NA	5115437	5116100	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5115400_5116100
WTC11_00005980	chr1	+	269	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTCTCATTTCCTTTCC	5116865	False	NA	NA	False	NA	NA	NA	5116922	5117191	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5116900_5117200
WTC11_00005981	chr1	+	252	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCTGATCATTTATT	NA	False	NA	NA	False	NA	NA	NA	8807940	8808192	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_8807900_8808200
WTC11_00005982	chr1	+	254	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGGGTTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	8894181	8894435	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_8894200_8894400
WTC11_00005983	chr1	+	285	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14975746	14976031	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_14975700_14976000
WTC11_00005984	chr1	+	731	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACACAGCACCAAAAACT	NA	False	NA	NA	False	NA	NA	NA	19130538	19131269	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_19130500_19131300
WTC11_00005985	chr1	+	342	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATCTGCCCACCTCGG	NA	False	NA	NA	False	NA	NA	NA	21172439	21172781	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21172400_21172800
WTC11_00005986	chr1	+	749	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATGGGGTGGAGACGT	NA	False	NA	NA	False	NA	NA	NA	21430333	21431082	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21430300_21431100
WTC11_00005987	chr1	+	399	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTCCTCCCAGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	21431462	21431861	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21431500_21431900
WTC11_00005988	chr1	+	574	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACGAAATTGCACCATT	NA	False	NA	NA	False	NA	NA	NA	23331055	23331629	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_23331100_23331600
WTC11_00005990	chr1	+	303	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGCATCGTGGTC	NA	False	NA	NA	False	AAAAAG	-2	NA	27321447	27321750	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_27321400_27321800
WTC11_00005991	chr1	+	310	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGGACTCTTAACATC	NA	False	NA	NA	False	NA	NA	NA	30717642	30717952	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_30717600_30718000
WTC11_00005994	chr1	+	216	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAATTATAGATCTTAAA	NA	False	NA	NA	False	AAAAAG	-27	NA	48437617	48437833	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_48437600_48437800
WTC11_00005997	chr1	+	289	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGACACTTTTAATCT	NA	False	NA	NA	False	NA	NA	NA	61057625	61057914	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_61057600_61057900
WTC11_00005998	chr1	+	1915	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCCCGTACTACTTTG	61777707	False	NA	NA	False	NA	NA	NA	61777733	61779648	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_61777700_61779600
WTC11_00006000	chr1	+	298	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAACAGCAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	62326195	62326493	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_62326200_62326500
WTC11_00006002	chr1	+	307	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGTTT	NA	False	NA	NA	False	NA	NA	NA	63702896	63703203	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_63702900_63703200
WTC11_00006003	chr1	+	5667	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGGTGGGGCAGAGCA	NA	False	NA	NA	False	NA	NA	NA	64349978	64355645	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_64350000_64355600
WTC11_00006004	chr1	+	685	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGGAGGTTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	65644661	65645346	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65644700_65645300
WTC11_00006007	chr1	+	316	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGCCTGAAGTAACT	NA	False	NA	NA	False	NA	NA	NA	68391305	68391621	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_68391300_68391600
WTC11_00006008	chr1	+	383	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAAGGAAAATGACAGT	72984792	False	NA	NA	False	NA	NA	NA	72984802	72985185	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72984800_72985200
WTC11_00006009	chr1	+	310	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTGTGACGGCTTG	72988296	False	NA	NA	False	NA	NA	NA	72988386	72988696	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72988400_72988700
WTC11_00006010	chr1	+	235	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTAGCAGGCGAGTGATA	72990170	False	NA	NA	False	TTTAAA	-8	NA	72990260	72990495	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72990300_72990500
WTC11_00006011	chr1	+	809	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAAACGTGGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	82071526	82072335	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_82071500_82072300
WTC11_00006012	chr1	+	307	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGACAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	89966142	89966449	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_89966100_89966400
WTC11_00006014	chr1	+	305	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTGACACCCATCATG	NA	False	NA	NA	False	NA	NA	NA	99512631	99512936	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_99512600_99512900
WTC11_00006015	chr1	+	340	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCTCCGTATAGATG	99513909	False	NA	NA	False	NA	NA	NA	99513923	99514263	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_99513900_99514300
WTC11_00006018	chr1	+	2179	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTACTTCTTACCCATC	NA	False	NA	NA	False	NA	NA	NA	112592048	112594227	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_112592000_112594200
WTC11_00006019	chr1	+	641	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTATCTTTTCATAGAA	NA	False	NA	NA	False	NA	NA	NA	113509351	113509992	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_113509400_113510000
WTC11_00006021	chr1	+	494	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	NA	False	NA	NA	False	AATAAA	-34	NA	120630556	120631050	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_120630600_120631000
WTC11_00006022	chr1	+	5202	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCGCAAAGGTGACTCTT	NA	False	NA	NA	False	NA	NA	NA	121110645	121115847	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_121110600_121115800
WTC11_00006024	chr1	+	284	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGGAG	NA	False	NA	NA	False	NA	NA	NA	145161869	145162153	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_145161900_145162200
WTC11_00006025	chr1	+	502	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAAGAAGGCCGTATG	NA	False	NA	NA	False	NA	NA	NA	145189914	145190416	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_145189900_145190400
WTC11_00006026	chr1	+	1156	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGTGGTTCAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	145234470	145235626	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_145234500_145235600
WTC11_00006027	chr1	+	2821	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	146148511	146151332	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146148500_146151300
WTC11_00006028	chr1	+	393	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTAAAGTTTTTTGC	NA	False	NA	NA	False	TATAAA	-7	NA	146320027	146320420	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146320000_146320400
WTC11_00006029	chr1	+	281	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTATCTAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	146386269	146386550	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146386300_146386600
WTC11_00006030	chr1	+	282	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	148771918	148772200	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_148771900_148772200
WTC11_00006031	chr1	+	520	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAATGGAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	148879181	148879701	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_148879200_148879700
WTC11_00006032	chr1	+	282	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAACAAAAGACTTAAAT	NA	False	NA	NA	False	NA	NA	NA	149358051	149358333	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_149358100_149358300
WTC11_00006034	chr1	+	3234	1	Genic_Genomic	ENSG00000286219.2	novel	NA	NA	NA	NA	62575	351	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGCATCTCACT	NA	False	NA	NA	False	NA	NA	NA	149468950	149472184	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_149469000_149472200
WTC11_00006035	chr1	+	277	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAAGGACACAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	149831274	149831551	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_149831300_149831600
WTC11_00006036	chr1	+	283	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155274095	155274378	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_155274100_155274400
WTC11_00006037	chr1	+	312	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCATCTTTCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	155308055	155308367	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_155308100_155308400
WTC11_00006038	chr1	+	330	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGGTAACTGGAGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	157709695	157710025	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_157709700_157710000
WTC11_00006039	chr1	+	250	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATGTGCAAAAAGAAA	160318242	False	NA	NA	False	AAAACA	-16	NA	160318258	160318508	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_160318300_160318500
WTC11_00006040	chr1	+	288	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTATTTAAGTTTTTA	161427058	False	NA	NA	False	NA	NA	NA	161427112	161427400	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_161427100_161427400
WTC11_00006041	chr1	+	267	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGGTCTCAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167709384	167709651	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_167709400_167709700
WTC11_00006042	chr1	+	307	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTAACCTTTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	171292095	171292402	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_171292100_171292400
WTC11_00006043	chr1	+	1235	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCCAGCAAACAAGAAAGAG	173449501	False	NA	NA	False	AATAAA	-45	NA	173449524	173450759	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_173449500_173450800
WTC11_00006044	chr1	+	2478	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTTTCTACAGTAT	NA	False	NA	NA	False	AATGAA	-19	NA	174931990	174934468	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_174932000_174934500
WTC11_00006045	chr1	+	303	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTATCAGTTTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	175832703	175833006	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_175832700_175833000
WTC11_00006046	chr1	+	323	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAAGAGGCTTGTT	178284461	False	NA	NA	False	NA	NA	NA	178285103	178285426	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_178285100_178285400
WTC11_00006047	chr1	+	253	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATCAGACTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	182941848	182942101	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_182941800_182942100
WTC11_00006049	chr1	+	553	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACAGCCCTAGACCCT	NA	False	NA	NA	False	TATAAA	-44	NA	183615067	183615620	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183615100_183615600
WTC11_00006051	chr1	+	760	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGGTGGTTCATG	NA	False	NA	NA	False	NA	NA	NA	196370489	196371249	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_196370500_196371200
WTC11_00006054	chr1	+	230	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGAAAAGTCATTTAAT	NA	False	NA	63	True	NA	NA	NA	204506520	204506750	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204506500_204506800
WTC11_00006055	chr1	+	845	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGTGCCAATGGAGCA	NA	False	NA	NA	False	NA	NA	NA	204670825	204671670	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204670800_204671700
WTC11_00006056	chr1	+	492	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGATGGAAGTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	205957919	205958411	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_205957900_205958400
WTC11_00006058	chr1	+	277	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATCGAGCTTCGGGTAA	212911724	False	NA	NA	False	NA	NA	NA	212911744	212912021	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212911700_212912000
WTC11_00006059	chr1	+	308	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACATAATTCCTCAGT	212912914	False	NA	NA	False	NA	NA	NA	212912941	212913249	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212912900_212913200
WTC11_00006061	chr1	+	1961	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCTGACTGCACTA	NA	False	NA	NA	False	NA	NA	NA	215410154	215412115	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215410200_215412100
WTC11_00006063	chr1	+	206	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAGCCAAGCCATCACA	221970859	False	NA	NA	False	AATATA	-27	NA	221971000	221971206	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221971000_221971200
WTC11_00006064	chr1	+	296	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGGTTGGTACTGAG	NA	False	NA	NA	False	NA	NA	NA	221976927	221977223	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221976900_221977200
WTC11_00006066	chr1	+	1146	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAATACTTTTAGAGG	229176898	False	NA	NA	False	NA	NA	NA	229176944	229178090	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_229176900_229178100
WTC11_00006067	chr1	+	335	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTTAGTCTGGGTAGA	229178311	False	NA	NA	False	ACTAAA	-2	NA	229178357	229178692	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_229178400_229178700
WTC11_00006069	chr1	+	234	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGGGTACGCGCATG	NA	False	NA	NA	False	AATAAA	-30	NA	231023981	231024215	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_231024000_231024200
WTC11_00006070	chr1	+	216	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAGGAAGGAAAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	231832186	231832402	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_231832200_231832400
WTC11_00006071	chr1	+	8521	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTTATCCCAAGAATA	232137113	False	NA	62	True	NA	NA	NA	232137128	232145649	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232137100_232145600
WTC11_00006072	chr1	+	219	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGTTTTGGATGAATTG	232230083	False	NA	NA	False	AAGAAA	-35	NA	232230094	232230313	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232230100_232230300
WTC11_00006073	chr1	+	1634	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGATACAAGAGGAGGAG	232230833	False	NA	NA	False	NA	NA	NA	232230844	232232478	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232230800_232232500
WTC11_00006077	chr1	+	278	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCTCCTCTTGTATCC	NA	False	NA	NA	False	NA	NA	NA	241436548	241436826	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_241436500_241436800
WTC11_00006080	chr1	+	642	3	FSM	ENSG00000243485.5	ENST00000473358.1	712	3	1	69	1	-69	multi-exon	FALSE	canonical	1	1	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACCCGTCCAGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	29554	31028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_30040_30563_30668_30975
WTC11_00006081	chr1	+	612	5	ISM	ENSG00000228794.11	ENST00000691316.1	3092	7	7	4424	6	14	5prime_fragment	FALSE	canonical	3	27	junction_3	16.6508258053467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGGTGATAAAGCAGAG	826988	True	NA	NA	False	NA	NA	NA	827698	852766	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670
WTC11_00006082	chr1	+	3401	14	FSM	ENSG00000187634.13	ENST00000616016.5	3465	14	64	0	64	0	multi-exon	TRUE	canonical	0	0	junction_3	2.23209509669952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTCTACTGCCTCCC	NA	False	NA	3	True	AATAAA	-13	NA	923986	944574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_924949_925921_926014_930154_930337_931038_931090_935771_935897_939039_939130_939274_939413_941143_941307_942135_942252_942409_942489_942558_943059_943252_943378_943697_943809_943907
WTC11_00006083	chr1	+	3489	8	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	7	-8	intron_retention	FALSE	canonical	3	80	junction_2	50.3583079905736	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGGCTGAGCATCT	959225	True	NA	1	True	AATAAA	-13	NA	960590	965711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964168_964348_964531_964962
WTC11_00006084	chr1	+	3198	10	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	7	-7	intron_retention	FALSE	canonical	3	86	junction_2	45.3605582738306	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCAGGCTGAGCATCTC	959225	True	NA	2	True	AATAAA	-14	NA	960590	965712	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_961751_961825_962048_962354_962472_962703_962918_963031_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
WTC11_00006085	chr1	+	2294	11	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	56.4681326059221	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTGAGCATCTCTC	959226	True	NA	4	True	AATAAA	-16	NA	960591	965714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_960801_961628_961751_961825_962048_962354_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
WTC11_00006086	chr1	+	2567	12	NNC	ENSG00000187961.15	novel	2567	12	NA	NA	61	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.6760388515893	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGGCTGAGCATCT	959279	True	NA	1	True	AATAAA	-13	NA	960644	965711	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_960801_961292_961553_961628_961751_961825_962048_962285_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
WTC11_00006087	chr1	+	7253	35	FSM	ENSG00000188157.15	ENST00000652369.1	7408	35	155	0	155	0	multi-exon	FALSE	canonical	1	4	junction_1	52.894464686427	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGCTTTTGTCCATCCT	1034250	False	NA	18	True	AATAAA	-18	NA	1034260	1056116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1034704_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051252_1051370_1051452_1051646_1051727_1051816_1053752_1053978_1054447_1054552_1054823
WTC11_00006088	chr1	+	647	1	FSM	ENSG00000272141.1	ENST00000606993.1	987	1	43	297	43	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGAGCTCGGGGACCTT	1169362	False	NA	NA	False	NA	NA	NA	1169399	1170046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1169400_1170000
WTC11_00006089	chr1	+	403	5	FSM	ENSG00000162571.14	ENST00000460998.1	718	5	315	0	262	0	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCGCTGCTGGTGGAC	1180787	False	NA	NA	False	NA	NA	NA	1180798	1183927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1180861_1181740_1181816_1182360_1182447_1182875_1183048_1183919
WTC11_00006090	chr1	+	1601	9	ISM	ENSG00000162572.21	ENST00000325425.12	2679	15	5311	0	311	0	3prime_fragment	FALSE	canonical	2	7	junction_5	1.6583123951777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCGGCCAGTGTGTGC	NA	False	NA	1	True	AATAAA	-13	NA	1287419	1292024	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1287597_1287672_1287837_1287938_1288038_1290270_1290389_1290476_1290556_1290636_1290695_1290894_1290954_1291064_1291141_1291253
WTC11_00006091	chr1	+	1075	2	FSM	ENSG00000224051.7	ENST00000464957.1	1101	2	26	0	-20	0	multi-exon	TRUE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTATTACACGCGT	1323276	True	NA	NA	False	NA	NA	NA	1324781	1327994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1325103_1327240
WTC11_00006093	chr1	+	1418	1	FSM	ENSG00000272455.1	ENST00000607307.1	1523	1	235	-130	235	130	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGGGGCAACCCACCC	1409072	False	NA	83	True	NA	NA	NA	1409330	1410748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1409300_1410700
WTC11_00006094	chr1	+	1648	10	Fusion	ENSG00000160072.20_ENSG00000215915.10	novel	3864	12	NA	NA	2454	0	multi-exon	TRUE	canonical	3	50	junction_1	119.437674226734	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGTGTCTCTCTATTG	NA	False	NA	17	True	AATAAA	-17	NA	1452367	1496201	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_1452435_1454344_1454501_1455462_1455520_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
WTC11_00006095	chr1	+	3357	16	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_2	129.981981657288	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGTGTCTCTCTATTG	1464795	True	NA	17	True	AATAAA	-17	NA	1471751	1496201	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1472090_1477273_1477351_1477750_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
WTC11_00006096	chr1	+	3020	17	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	146.469373398503	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTGTCTCTCTATTGAC	1464842	True	NA	19	True	AATAAA	-19	NA	1471798	1496203	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1472090_1477273_1477351_1477750_1478352_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
WTC11_00006099	chr1	+	1198	3	NNC	ENSG00000286989.1	novel	1830	3	NA	NA	-102	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGACGTTTTCAGCTTC	1600126	True	NA	101	True	CATAAA	-23	NA	1600211	1602849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1600583_1600656_1600707_1602072
WTC11_00006100	chr1	+	2971	20	NNC	ENSG00000197530.13	novel	3034	20	NA	NA	28	-3	intron_retention	FALSE	canonical	1	1	junction_13	128.734518204269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACGTTGCCTCTGCTGT	1615049	False	NA	6	True	TATAAA	-12	NA	1615557	1630600	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1615634_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628015_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
WTC11_00006101	chr1	+	3273	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	41	junction_3	121.589404881763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTTGCCTCTGCTGTCT	1614522	True	NA	8	True	TATAAA	-14	NA	1615896	1630602	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1616101_1616507_1616615_1623430_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
WTC11_00006103	chr1	+	546	2	FSM	ENSG00000197530.13	ENST00000470373.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	1629457	False	NA	11	True	TATAAA	-17	NA	1629472	1630605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1629705_1630291
WTC11_00006104	chr1	+	478	2	NNC	ENSG00000197530.13	novel	4247	19	NA	NA	556	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTTGCCTCTGCTGTCT	1630013	False	NA	8	True	TATAAA	-14	NA	1630028	1630602	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1630196_1630291
WTC11_00006106	chr1	+	1325	7	FSM	ENSG00000189409.14	ENST00000378675.7	1309	7	-16	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	21.2733531808118	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	1631001	True	NA	NA	False	GATAAA	-16	NA	1632162	1634654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1632375_1632782_1632914_1632980_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
WTC11_00006107	chr1	+	2400	6	NNC	ENSG00000215914.4	novel	1017	7	NA	NA	-1306	0	intron_retention	TRUE	canonical	2	5	junction_1	27.0968632871039	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGCTGATAAAGCACTT	1698611	False	NA	NA	False	GGGGCT	-3	NA	1698635	1701782	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1699560_1699941_1700073_1700139_1701072_1701147_1701259_1701360_1701488_1701607
WTC11_00006110	chr1	+	1899	9	FSM	ENSG00000187730.9	ENST00000378585.7	1914	9	15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.02715934252836	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGCGCTTCACTCCT	2019249	True	NA	20	True	AATAAA	-34	NA	2019359	2030758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029110_2029267_2029550_2029763_2029982
WTC11_00006111	chr1	+	372	5	FSM	ENSG00000067606.17	ENST00000471018.6	716	5	344	0	344	0	multi-exon	FALSE	canonical	1	1	junction_1	64.0897807766574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTGGAGCAGCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	2133981	2148924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2134001_2135261_2135348_2144209_2144342_2146026_2146109_2148871
WTC11_00006112	chr1	+	6289	7	NIC	ENSG00000157933.10	novel	6083	7	NA	NA	-274	-74	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	3.78593889720018	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGCTGTGTACCTGTTAG	2227140	True	NA	37	True	TATAAA	-41	NA	2228044	2310139	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_2229736_2302977_2303104_2303284_2303401_2303839_2304109_2304292_2304586_2306019_2306251_2306576
WTC11_00006113	chr1	+	4032	4	FSM	ENSG00000287356.1	ENST00000659232.1	4032	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGAGGCAGCGTTTCCT	2315014	True	NA	NA	False	GGGGCT	-28	NA	2315039	2321323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2315999_2316391_2317012_2317610_2317730_2318989
WTC11_00006114	chr1	+	540	6	FSM	ENSG00000157916.20	ENST00000443438.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	413.397919685138	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCACGATGAAGAGGCAA	2393162	False	NA	NA	False	NA	NA	NA	2393173	2402316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2393232_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206
WTC11_00006116	chr1	+	2783	15	NNC	ENSG00000130762.15	novel	2822	15	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	27.958423943201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	3452904	True	NA	9	True	ATTAAA	-16	NA	3454720	3481113	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_3454829_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
WTC11_00006117	chr1	+	5195	14	FSM	ENSG00000078900.15	ENST00000378295.9	5192	14	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_1	7.02067951329516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTCTCATGACTCAACC	3652486	False	NA	6	True	AATAAA	-17	NA	3652512	3736201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3652642_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
WTC11_00006124	chr1	+	266	3	FSM	ENSG00000158286.13	ENST00000463453.1	266	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGGCAGGGATCTGC	6210863	False	NA	NA	False	NA	NA	NA	6210901	6212053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6210939_6211020_6211119_6211922
WTC11_00006125	chr1	+	612	4	FSM	ENSG00000158286.13	ENST00000492476.1	612	4	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	4.32049379893857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTCCCCTTAGCGCT	6210996	False	NA	NA	False	NA	NA	NA	6211034	6212836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6211119_6211866_6212054_6212230_6212417_6212681
WTC11_00006126	chr1	+	2080	5	NIC	ENSG00000225077.3	novel	1138	5	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	19.266226926931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCCTGGGATGCCT	6235879	True	NA	7	True	AATATA	-17	NA	6236145	6239444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_6236337_6236965_6237151_6237244_6237346_6237469_6237849_6238220
WTC11_00006127	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2671152621316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	6235973	True	NA	NA	False	NA	NA	NA	6236239	6238940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
WTC11_00006129	chr1	+	2173	3	ISM	ENSG00000173673.8	ENST00000377898.4	710	4	12	-995	12	995	intron_retention	FALSE	canonical	3	195	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGAGGTCTAATGTCTC	6238573	True	NA	28	True	AATAAA	-36	NA	6244190	6246573	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_6244242_6244350_6244447_6244547
WTC11_00006130	chr1	+	526	2	FSM	ENSG00000187017.18	ENST00000632593.1	506	2	-20	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGAGCGCTGGCCCTGGC	6447265	False	NA	NA	False	NA	NA	NA	6447330	6449037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6447460_6448640
WTC11_00006131	chr1	+	1494	7	FSM	ENSG00000187017.18	ENST00000633239.1	1494	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64.577257778743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCCGGTTCACTCACT	6449039	False	NA	4	True	ATTAAA	-12	NA	6449054	6460926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6449092_6450443_6450471_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
WTC11_00006134	chr1	+	532	5	NNC	ENSG00000171735.19	novel	431	5	NA	NA	0	64256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2158.89119399288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAACATAGTGAAGAGTT	6762043	True	NA	NA	False	AAAAAG	-19	NA	6785517	6952457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6872015_6952430
WTC11_00006136	chr1	+	431	4	FSM	ENSG00000049246.15	ENST00000473653.1	523	4	0	92	0	-92	multi-exon	FALSE	canonical	1	4	junction_2	14.8548533034381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGGACCAATGTTCAG	7784950	False	NA	NA	False	NA	NA	NA	7785522	7788246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7785587_7786720_7786837_7787197_7787247_7788044
WTC11_00006140	chr1	+	1024	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	10	0	-1	multi-exon	FALSE	canonical	2	13	junction_2	4	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGTCATTGGTGGAAT	9182149	False	NA	7	True	AATAAA	-19	NA	9182163	9192088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9182317_9183632_9183808_9191392
WTC11_00006143	chr1	+	9170	5	FSM	ENSG00000049239.13	ENST00000377403.7	9147	5	-23	0	-23	0	multi-exon	FALSE	canonical	2	6	junction_4	1.4790199457749	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGCTTTAATTCTTTAT	9234090	True	NA	15	True	AATAAA	-16	NA	9234750	9271337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9235067_9244924_9245562_9246965_9247084_9262058_9262329_9263508
WTC11_00006145	chr1	+	5399	24	FSM	ENSG00000171608.17	ENST00000377346.9	5412	24	13	0	12	0	multi-exon	FALSE	canonical	3	6	junction_1	14.9946430257842	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGGACATCCCCTGGG	9651594	True	NA	NA	False	NA	NA	NA	9651743	9729114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9651803_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
WTC11_00006146	chr1	+	1065	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	29	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_4	5.11737237261468	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	9942968	True	NA	NA	False	AATAAA	-17	NA	9943456	9981766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
WTC11_00006147	chr1	+	5905	28	FSM	ENSG00000130939.20	ENST00000343090.11	5905	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.5892158905534	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGAGTCTCTTCTC	10029563	True	NA	NA	False	AATAAA	-24	NA	10032957	10181239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10106196_10106584_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
WTC11_00006148	chr1	+	1264	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	9	0	-9	multi-exon	FALSE	canonical	2	7	junction_2	145.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATAATGTTTCCTCTG	10033255	False	NA	NA	False	AATAAA	-10	NA	10033273	10073109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10033695_10072027_10072215_10072453
WTC11_00006150	chr1	+	10613	46	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-68	-1	combination_of_known_splicesites	FALSE	canonical	3	41	junction_12	44.0717708704146	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTCGATGTGCATTTA	10202965	True	NA	10	True	AATAAA	-21	NA	10210501	10381602	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10320042_10320137_10321708_10321858_10323883_10324063_10324757_10324896_10334519_10334639_10336656_10336743_10337073_10337204_10337370_10337534_10339768_10339860_10342049_10342169_10343231_10343288_10345844_10345954_10347760_10347828_10348648_10348734_10352630_10352737_10360928_10361044_10361691_10361826_10363282_10363345_10365099_10365246_10365408_10365649_10368466_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10376544
WTC11_00006153	chr1	+	1844	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	33.3894765286481	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471578	True	NA	10	True	AATAAA	-21	NA	10474898	10630758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
WTC11_00006154	chr1	+	5381	2	FSM	ENSG00000120942.14	ENST00000376804.2	825	2	0	-4556	0	3671	multi-exon	FALSE	canonical	2	3	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGAAGAGGGGGAAGAG	11273222	False	NA	NA	False	NA	NA	NA	11273527	11299720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11274061_11294872
WTC11_00006155	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	91.4668655853036	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	NA	False	NA	15	True	AATAAA	-16	NA	11654374	11662289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
WTC11_00006156	chr1	+	3507	5	NIC	ENSG00000132879.14	novel	822	6	NA	NA	0	-7	intron_retention	FALSE	canonical	3	92	junction_3	63.5152540733326	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAATCACCCAGTCTCG	11653220	True	NA	NA	False	ATTAAA	-12	NA	11654909	11663317	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
WTC11_00006157	chr1	+	2093	6	NIC	ENSG00000132879.14	novel	822	6	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	73.413895142541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTGTGCCCTGTGGTTT	11653230	True	NA	14	True	AATAAA	-15	NA	11654919	11662288	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
WTC11_00006158	chr1	+	966	11	FSM	ENSG00000011021.23	ENST00000376490.7	963	11	-3	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	35.8006983172116	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGTTTTGTCCTTTCCC	11804325	True	NA	NA	False	NA	NA	NA	11806259	11828218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826225_11827088_11827222_11828105
WTC11_00006159	chr1	+	3864	15	NIC	ENSG00000120949.15	novel	3760	15	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	16.0676185960129	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	12063116	False	NA	27	True	CATAAA	-19	NA	12063195	12144207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138231_12138437_12142286
WTC11_00006160	chr1	+	16266	69	NIC	ENSG00000048707.15	novel	16245	69	NA	NA	6	-7	combination_of_known_splicesites	TRUE	canonical	1	5	junction_39	26.9553769087108	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAACTTGTTCTTTTGT	12228053	True	NA	13	True	AATAAA	-15	NA	12230035	12512040	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12230121_12234190_12234364_12242512_12242591_12244245_12244437_12244536_12244618_12249222_12249340_12253721_12253827_12256332_12256504_12256986_12257088_12257934_12258104_12260692_12260795_12260947_12261150_12261900_12262081_12266880_12267012_12267844_12267921_12268705_12268877_12270993_12271125_12273002_12273136_12275824_12278039_12279498_12279651_12282704_12283737_12288222_12288314_12290997_12291125_12293523_12293705_12299201_12299385_12304505_12304729_12308430_12308642_12311453_12311626_12311812_12311926_12314114_12314328_12318071_12318338_12319496_12319631_12321808_12321965_12322535_12322747_12323705_12323781_12327647_12327855_12329828_12329919_12333225_12333367_12335704_12335828_12341782_12341886_12342898_12343052_12345373_12345510_12346604_12346653_12348822_12348974_12349163_12349375_12353973_12354222_12355898_12356091_12356397_12356525_12358458_12358602_12362719_12362851_12363071_12363248_12368467_12368592_12369466_12369703_12373749_12373859_12378427_12378592_12379487_12379597_12382975_12383156_12385259_12385374_12386184_12386335_12400180_12400331_12401607_12401705_12403824_12403974_12415086_12415222_12416659_12416828_12455997_12456131_12460200_12460397_12497499_12497632_12506852_12507094_12508892
WTC11_00006161	chr1	+	6695	8	NIC	ENSG00000116731.23	novel	7279	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	10.1760021820046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGGACTGCATTT	13699334	True	NA	12	True	AATAAA	-15	NA	13700197	13788079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_13700301_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13773077_13773189_13778417_13782832_13786514
WTC11_00006162	chr1	+	2701	8	FSM	ENSG00000116731.23	ENST00000376048.9	2688	8	0	-13	0	-1	multi-exon	FALSE	canonical	2	11	junction_6	10.507528884819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGGAGTGATCATTCT	13699376	True	NA	NA	False	AATAAA	-27	NA	13700239	13825078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13816426_13816571_13823158
WTC11_00006163	chr1	+	3925	8	NNC	ENSG00000189337.17	novel	1475	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	3	junction_5	16.2254524165722	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATTCTATGTTATTTGA	14597597	True	NA	13	True	AATAAA	-19	NA	14598686	15068152	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_14599224_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060178_15060303_15063571_15063623_15065629
WTC11_00006165	chr1	+	2561	14	ISM	ENSG00000142621.21	ENST00000358897.8	5090	31	24	68044	16	23	5prime_fragment	FALSE	canonical	2	5	junction_11	3.97774876118397	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGGTACGTCATCCAT	15247083	True	NA	NA	False	NA	NA	NA	15247295	15330082	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_15247396_15251770_15251878_15272322_15272530_15289398_15289667_15296683_15296794_15301204_15301442_15308612_15308737_15313056_15313188_15316377_15316468_15317823_15317929_15324451_15324560_15327058_15327143_15328276_15328430_15329345
WTC11_00006168	chr1	+	545	1	FSM	ENSG00000235084.3	ENST00000454346.1	447	1	35	-133	35	133	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAATTGAAATGGAAGG	15604606	False	NA	NA	False	NA	NA	NA	15604631	15605176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15604600_15605200
WTC11_00006169	chr1	+	1435	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	8	0	8	0	multi-exon	FALSE	canonical	1	6	junction_1	0.748331477354788	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	15742443	True	NA	5	True	AATAAA	-18	NA	15742506	15747982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
WTC11_00006170	chr1	+	2092	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-162	0	combination_of_known_junctions	TRUE	canonical	3	126	junction_2	111.823451811326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	15758599	True	NA	-12	True	NA	NA	NA	15758621	15785329	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
WTC11_00006171	chr1	+	458	1	FSM	ENSG00000178715.8	ENST00000321418.6	438	1	-20	0	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCCCATCATGACTATCA	NA	False	NA	NA	False	NA	NA	NA	15828211	15828669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15828200_15828700
WTC11_00006173	chr1	+	2133	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	-4	0	-4	0	multi-exon	TRUE	canonical	2	10	junction_2	3.8613109460677	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	16048771	False	NA	14	True	AATAAA	-14	NA	16048784	16057308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
WTC11_00006175	chr1	+	385	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	-46	-12	-46	12	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	16520631	False	NA	17	True	AATAAA	-31	NA	16520647	16521808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16520788_16521563
WTC11_00006177	chr1	+	6535	36	NNC	ENSG00000058453.17	novel	6660	37	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	48.2465606260684	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	16920343	True	NA	26	True	TTTAAA	-4	NA	16921879	16972964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_16922079_16922662_16922799_16929845_16930032_16930123_16930208_16930285_16930348_16930428_16930595_16931290_16931398_16936636_16936874_16937640_16937738_16938399_16938484_16938908_16939143_16939893_16940094_16944099_16944283_16945461_16945607_16946258_16946406_16946760_16946992_16948330_16948525_16948798_16948927_16950952_16951123_16953301_16953482_16954222_16954358_16954733_16954878_16955311_16955551_16955996_16956157_16958582_16958751_16960757_16961131_16965722_16965893_16965998_16966120_16966407_16966572_16968202_16968419_16969115_16969341_16969784_16969935_16970252_16970454_16970635_16970768_16971464_16971627_16972359
WTC11_00006180	chr1	+	1088	4	NIC	ENSG00000058453.17	novel	6660	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	87.217480408969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	16969770	False	NA	26	True	TTTAAA	-4	NA	16969784	16972964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_16969935_16970252_16970454_16970635_16970768_16972359
WTC11_00006181	chr1	+	3193	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	-4	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_1	2.21710521977545	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	17248862	True	NA	28	True	AATAAA	-17	NA	17249093	17284233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
WTC11_00006182	chr1	+	3020	20	NIC	ENSG00000074964.17	novel	4625	29	NA	NA	0	2766	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	56.3515380879293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATGCAGGTTGGACT	17538214	True	NA	7	True	AATAAA	-14	NA	17539697	17640769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17613057_17613175_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17640201
WTC11_00006183	chr1	+	5239	28	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	48.3683001088356	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGAGGTTTTGTTGTG	17538214	True	NA	14	True	AATAAA	-23	NA	17539697	17697871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17639237_17639982_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
WTC11_00006184	chr1	+	4571	28	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	50.744930889439	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGAGGTTTTGTTGTG	17538214	True	NA	14	True	AATAAA	-23	NA	17539697	17697871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17639237_17639314_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
WTC11_00006186	chr1	+	2535	7	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	0	-36	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	20.6512038928054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCGTCTCAAAAAAATAAAA	19311543	False	NA	-28	True	NA	NA	NA	19312728	19329248	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
WTC11_00006189	chr1	+	6113	6	NIC	ENSG00000169914.6	novel	6515	8	NA	NA	104	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	8.4	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	19879337	False	NA	NA	False	AATAAA	-19	NA	19882498	19912945	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_19882735_19890384_19890534_19897539_19897663_19904266_19904399_19904890_19904988_19907569
WTC11_00006192	chr1	+	386	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTAGTAGGCCCGAGC	NA	False	NA	NA	False	NA	NA	NA	21429862	21430248	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21429900_21430200
WTC11_00006193	chr1	+	4385	17	NNC	ENSG00000142794.19	novel	4401	18	NA	NA	-406	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	26.6457518893725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21439694	False	NA	NA	False	ATTAAA	-16	NA	21439721	21484900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_21440349_21444947_21445220_21453372_21453431_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00006194	chr1	+	4388	18	FSM	ENSG00000142794.19	ENST00000318220.10	4401	18	-92	105	-83	0	multi-exon	FALSE	canonical	0	0	junction_4	30.8394660193698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21440017	False	NA	NA	False	ATTAAA	-16	NA	21440044	21484900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21440349_21444947_21445220_21466086_21466157_21466995_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00006195	chr1	+	2741	3	NNC	ENSG00000142794.19	novel	3767	15	NA	NA	0	2806	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	49.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAATACATGTGCTTA	21438280	True	NA	8	True	AATAAA	-23	NA	21440136	21457112	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_21440349_21444947_21445220_21454855
WTC11_00006196	chr1	+	4110	18	NIC	ENSG00000142794.19	novel	4401	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	29.3078163104284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438280	True	NA	NA	False	ATTAAA	-16	NA	21440136	21484900	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_21440349_21444947_21445220_21466086_21466157_21467181_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00006198	chr1	+	1087	2	NIC	ENSG00000218510.9	novel	1077	2	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024222	True	NA	NA	False	AATAAA	-1	NA	22025496	22031223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_22025640_22030279
WTC11_00006199	chr1	+	1432	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_5	213.251400933265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTGATGAAGCTTTA	22009341	True	NA	NA	False	ATTAAA	-20	NA	22052708	22090804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
WTC11_00006201	chr1	+	5017	17	FSM	ENSG00000070886.12	ENST00000166244.8	5019	17	0	2	0	-2	multi-exon	FALSE	canonical	1	3	junction_5	25.4152236612232	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGTCCCCCATTTTT	22562663	True	NA	3	True	AATAAA	-15	NA	22563488	22603593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870_22589207_22593325_22593451_22593523_22593687_22595229_22595324_22596105_22596174_22597311_22597477_22597675_22597862_22598150_22598213_22598837_22599048_22600660_22600811_22600897_22601089_22601299_22601474_22601626
WTC11_00006202	chr1	+	3127	20	NIC	ENSG00000004487.18	novel	3099	20	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	1368	junction_2	491.317077775776	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCATATAAAATTGGCC	22987729	True	NA	0	True	NA	NA	NA	23019396	23083672	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
WTC11_00006203	chr1	+	1194	2	FSM	ENSG00000249087.8	ENST00000454117.2	1266	2	15	57	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAATTGTCATAGTTTT	23368858	True	NA	6	True	AATAAA	-22	NA	23368963	23371782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23369514_23371138
WTC11_00006205	chr1	+	612	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	274	12	0	-5	multi-exon	FALSE	canonical	2	4	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCACAATTGTCATA	23369132	False	NA	1	True	AATAAA	-17	NA	23369237	23371777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23369514_23371138_23371210_23371512
WTC11_00006206	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2962.72479104962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	23576114	True	NA	42	True	AATAAA	-39	NA	23691805	23696412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
WTC11_00006208	chr1	+	2769	5	NIC	ENSG00000117602.13	novel	6863	5	NA	NA	-20	1	intron_retention	FALSE	canonical	3	21	junction_1	26.4480623108764	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGCCCATTTTTTAC	24502835	True	NA	30	True	AATAAA	-24	NA	24502876	24537020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24503118_24514313_24514568_24531217_24531392_24533082_24533255_24535092
WTC11_00006209	chr1	+	3966	4	FSM	ENSG00000184454.7	ENST00000374392.3	3980	4	14	0	14	0	multi-exon	FALSE	canonical	2	5	junction_1	2.16024689946929	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGAGTTTATTTCAGT	24556031	True	NA	NA	False	AATAAA	-44	NA	24556100	24609328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24556170_24595423_24595513_24600939_24601025_24605605
WTC11_00006211	chr1	+	448	1	FSM	ENSG00000284602.1	ENST00000641729.1	2190	1	14	1728	14	-1728	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAACGATAACCAGCCAT	25232433	True	NA	NA	False	NA	NA	NA	25232599	25233047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25232600_25233000
WTC11_00006212	chr1	+	1747	1	NIC	ENSG00000187010.21	novel	1441	7	NA	NA	30189	-2459	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACTCAGGAGGCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	25302736	25304483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_25302700_25304500
WTC11_00006213	chr1	+	586	1	FSM	ENSG00000238084.4	ENST00000419297.2	478	1	41	-149	41	149	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTTGAGGAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	25398761	25399347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25398800_25399300
WTC11_00006214	chr1	+	4330	13	FSM	ENSG00000162430.18	ENST00000361547.7	4314	13	-16	0	-16	0	multi-exon	FALSE	canonical	3	18	junction_3	78.3198569968051	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGTGGTTCTAAGTGCT	25791341	True	NA	15	True	AATAAA	-16	NA	25800176	25818221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25800414_25801042_25801161_25802015_25802118_25805141_25805276_25808579_25808790_25809025_25809151_25809682_25809821_25811453_25811536_25811690_25811880_25812686_25812793_25813880_25813994_25814076_25814179_25815547
WTC11_00006219	chr1	+	1804	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	-717	-4	-717	0	multi-exon	FALSE	canonical	2	9	junction_1	16.739839372653	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGTCTTTAATGC	NA	False	NA	NA	False	AATAAA	-44	NA	26224597	26229844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
WTC11_00006222	chr1	+	498	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	-38	7	-38	-7	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCAGTGGGGTCCTGCT	26317714	True	NA	0	True	AATAAA	-12	NA	26317919	26320516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26318072_26320170
WTC11_00006223	chr1	+	2596	22	FSM	ENSG00000117676.14	ENST00000526792.5	2596	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.274848139495	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTATGAAAAAAATG	26528160	False	NA	NA	False	TATAAA	-2	NA	26531217	26574431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26531439_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
WTC11_00006225	chr1	+	8907	21	NNC	ENSG00000117713.21	novel	8595	20	NA	NA	-291	3668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	37.0902952266492	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGAACAGACTGATGG	26694708	True	NA	NA	False	AATATA	-40	NA	26695723	26785772	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_26697541_26729650_26729864_26731151_26731605_26732675_26732793_26760855_26761097_26761383_26761474_26762151_26762320_26762972_26763286_26766220_26766367_26766456_26766567_26767789_26768000_26771118_26771327_26772499_26772633_26772811_26772988_26773345_26773497_26773579_26773718_26773801_26773899_26774328_26775221_26775576_26775708_26779022_26782101_26785747
WTC11_00006227	chr1	+	3156	7	NNC	ENSG00000204160.12	novel	5045	8	NA	NA	11	1757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.4956848246099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGCTTTGGTTTGGTTT	26824223	True	NA	20	True	AATAAA	-20	NA	26826698	26855720	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26851073_26851232_26852752_26852866_26853725
WTC11_00006229	chr1	+	2074	3	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	11	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAAACTCATTCTTG	27059254	True	NA	NA	False	AATAAA	-33	NA	27059293	27065591	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_27059321_27060013_27060081_27063611
WTC11_00006230	chr1	+	5095	10	FSM	ENSG00000142784.16	ENST00000491239.2	5149	10	0	54	0	-54	multi-exon	FALSE	canonical	3	58	junction_5	11.6883396575655	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTGTGTATATATA	NA	False	NA	10	True	AATATA	-19	NA	27287708	27308565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27287862_27292214_27292398_27294021_27294117_27294513_27294630_27296325_27296402_27297047_27297157_27297937_27298112_27301225_27301462_27303620_27305194_27306185
WTC11_00006231	chr1	+	635	1	FSM	ENSG00000241547.1	ENST00000486001.1	468	1	77	-244	77	244	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAACCCTTAGTACATG	27322566	False	NA	NA	False	NA	NA	NA	27325405	27326040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27325400_27326000
WTC11_00006232	chr1	+	2299	14	NIC	ENSG00000142765.18	novel	1936	15	NA	NA	-58	0	intron_retention	FALSE	canonical	2	17	junction_9	18.7673391228346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	27341949	False	NA	NA	False	AATAAA	-16	NA	27341961	27353930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00006233	chr1	+	1964	12	NIC	ENSG00000142765.18	novel	1936	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_7	20.4228036540263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	27341334	True	NA	NA	False	AATAAA	-16	NA	27342021	27353930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27350388_27350486_27350793_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00006234	chr1	+	2329	13	FSM	ENSG00000142765.18	ENST00000483926.5	2525	13	196	0	196	0	multi-exon	FALSE	canonical	2	2	junction_1	20.9775011752009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	27341565	False	NA	NA	False	AATAAA	-16	NA	27342252	27353930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27342368_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349766_27349971_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00006235	chr1	+	2681	8	FSM	ENSG00000142765.18	ENST00000490170.5	2681	8	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	23.5900359456777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	27346856	False	NA	NA	False	AATAAA	-16	NA	27347543	27353930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00006236	chr1	+	2235	2	FSM	ENSG00000142765.18	ENST00000475199.1	2235	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	27350864	True	NA	NA	False	AATAAA	-16	NA	27351471	27353930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27353489_27353712
WTC11_00006237	chr1	+	247	3	FSM	ENSG00000117758.14	ENST00000472285.1	373	3	0	126	0	-126	multi-exon	FALSE	canonical	3	89	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTGAGTTGATAGTAT	NA	False	NA	NA	False	NA	NA	NA	27810246	27817948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27810290_27812162_27812269_27817850
WTC11_00006238	chr1	+	1965	1	FSM	ENSG00000252947.1	ENST00000517138.1	166	1	22	-1821	22	1821	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGCAAGTTTTTTATTT	27832056	False	NA	NA	False	ATTAAA	-17	NA	27834422	27836387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27834400_27836400
WTC11_00006239	chr1	+	2300	4	FSM	ENSG00000158156.9	ENST00000675359.1	1578	4	-217	-505	0	0	multi-exon	FALSE	canonical	2	5	junction_3	55.3915356550279	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATGAAATCCTCCAAC	27959187	True	NA	-2	True	AATAAA	-1	NA	27960044	27968077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27960363_27963496_27963694_27965718_27965929_27966502
WTC11_00006240	chr1	+	6109	15	NIC	ENSG00000204138.13	novel	3078	17	NA	NA	-3	0	intron_retention	TRUE	canonical	3	18	junction_3	25.5869864882721	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	28363472	True	NA	12	True	ATTAAA	-25	NA	28369706	28500364	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28369826_28407409_28407464_28457831_28457860_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
WTC11_00006242	chr1	+	335	1	FSM	ENSG00000229820.2	ENST00000438601.2	394	1	59	0	59	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCACGGTGGCACACG	NA	False	NA	NA	False	AATACA	-10	NA	28453599	28453934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28453600_28453900
WTC11_00006243	chr1	+	2858	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	-14	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	255.961083739089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	28462254	True	NA	132	True	AATAGA	-37	NA	28506042	28539300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
WTC11_00006246	chr1	+	814	1	FSM	ENSG00000279443.1	ENST00000624273.1	2083	1	1271	-2	1271	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGCTGTGCTATAAAT	28545720	False	NA	NA	False	AATAAA	-16	NA	28545730	28546544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28545700_28546500
WTC11_00006247	chr1	+	1146	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	-14	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	84.5897872013249	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	28549310	True	NA	19	True	NA	NA	NA	28553084	28577744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
WTC11_00006249	chr1	+	1008	8	FSM	ENSG00000180098.9	ENST00000484775.1	1008	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	95.2845362959954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCTGCATTCATTTGAC	28560602	False	NA	50	True	NA	NA	NA	28560632	28577775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28574588_28574719_28577499
WTC11_00006250	chr1	+	1135	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	74	junction_3	464.271711632555	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727246	True	NA	22	True	AATAAA	-23	NA	28736964	28769775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
WTC11_00006251	chr1	+	6204	20	NIC	ENSG00000159023.22	novel	5925	21	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	73.7957801945019	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTCTCTGTGAGGAT	28886211	True	NA	3	True	AATAAA	-12	NA	28887158	29120037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28887211_28987447_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053106_29053313_29058588_29058646_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00006252	chr1	+	5907	18	NIC	ENSG00000159023.22	novel	2937	20	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_12	51.9405435975034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTCTCTGTGAGGAT	28908134	True	NA	3	True	AATAAA	-12	NA	28914526	29120037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00006253	chr1	+	6477	21	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	59.7733218083118	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTCTCTGTGAGGAT	28908134	True	NA	3	True	AATAAA	-12	NA	28914526	29120037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29060421_29060485_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00006255	chr1	+	4685	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	43.2980625689213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	29259433	True	NA	18	True	AATAAA	-19	NA	29260182	29326800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
WTC11_00006259	chr1	+	1758	10	FSM	ENSG00000084623.12	ENST00000678889.1	1736	10	-22	0	-20	0	multi-exon	FALSE	canonical	3	1054	junction_1	233.896991150241	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGGTGTCTGTTT	32207654	True	NA	30	True	AATAAA	-31	NA	32222384	32231601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32229209_32230926_32231020_32231114
WTC11_00006260	chr1	+	1437	11	FSM	ENSG00000084623.12	ENST00000373586.2	1417	11	-20	0	-20	0	multi-exon	FALSE	canonical	1	12	junction_10	526.127132925113	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207654	True	NA	33	True	AATAAA	-34	NA	32222384	32231604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231120
WTC11_00006261	chr1	+	1278	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	-22	0	-20	0	multi-exon	FALSE	canonical	3	11	junction_5	564.102521108519	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207654	True	NA	33	True	AATAAA	-34	NA	32222384	32231604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00006262	chr1	+	1737	12	FSM	ENSG00000084623.12	ENST00000678150.1	1715	12	-22	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_10	656.493867714777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGCCCTTCTGAATGT	32207654	True	NA	NA	False	AATAAA	-19	NA	32222384	32236170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32234423_32234550_32235512
WTC11_00006263	chr1	+	873	9	FSM	ENSG00000084623.12	ENST00000355082.10	858	9	-15	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	220.442736328508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTGT	32207687	True	NA	NA	False	ATTAAA	-16	NA	32222417	32229254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134
WTC11_00006265	chr1	+	1260	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	-10	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	562.343311509971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207687	True	NA	33	True	AATAAA	-34	NA	32222417	32231604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
WTC11_00006267	chr1	+	1167	3	NNC	ENSG00000183615.6	novel	947	2	NA	NA	-4913	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCAGTCGTTTATT	32241903	False	NA	10	True	AATAAA	-24	NA	32242308	32248861	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_32242751_32247448_32247683_32248370
WTC11_00006268	chr1	+	1927	5	FSM	ENSG00000160062.15	ENST00000316459.4	1943	5	16	0	16	0	multi-exon	FALSE	canonical	2	4	junction_4	5.52268050859363	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAATCATTCATATT	32538589	True	NA	NA	False	ACTAAA	-2	NA	32539444	32600990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600267
WTC11_00006270	chr1	+	238	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGGTGGGCCGATCACC	NA	False	NA	NA	False	NA	NA	NA	32640689	32640927	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_32640700_32640900
WTC11_00006271	chr1	+	5493	7	FSM	ENSG00000162522.11	ENST00000401073.7	5493	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	19.2671280221579	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	32741265	True	NA	21	True	ATTAAA	-14	NA	32741829	32774970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32742190_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
WTC11_00006274	chr1	+	4356	8	NIC	ENSG00000116497.18	novel	706	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_6	120.051689547733	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	32812692	True	NA	20	True	AATAAA	-17	NA	32817698	32858875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32817847_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32834033_32834062_32853078_32853167_32855923
WTC11_00006278	chr1	+	6473	27	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	24	-114	combination_of_known_splicesites	FALSE	canonical	3	39	junction_2	61.6518306691056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	35263735	True	NA	9	True	AATAAA	-20	NA	35268732	35421944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35325359_35325406_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00006279	chr1	+	7235	31	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	51	-114	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	72.5133321075051	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	35263762	True	NA	9	True	AATAAA	-20	NA	35268759	35421944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269086_35284672_35284707_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00006280	chr1	+	1006	4	FSM	ENSG00000146463.12	ENST00000441447.1	466	4	-268	-272	56	272	multi-exon	FALSE	canonical	3	45	junction_1	76.630426217151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTTTTATTACTTT	35263767	True	NA	NA	False	ATTAAA	-16	NA	35268764	35359501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924
WTC11_00006281	chr1	+	7017	32	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	7	-114	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	78.5854254597698	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	35268677	False	NA	9	True	AATAAA	-20	NA	35269039	35421944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269086_35284672_35284707_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00006283	chr1	+	522	3	FSM	ENSG00000134698.11	ENST00000488778.1	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTGTAATGTGACTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	35841672	35851195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35841751_35850156_35850259_35850853
WTC11_00006284	chr1	+	931	5	ISM	ENSG00000126070.20	ENST00000397828.3	1035	6	148	9065	-28	-5	5prime_fragment	FALSE	canonical	3	93	junction_2	10.6858551365813	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACATACTGGTGTCTCG	35931174	False	NA	4	True	CATAAA	-13	NA	35931229	35973587	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374
WTC11_00006286	chr1	+	4396	12	NNC	ENSG00000054118.15	novel	4405	12	NA	NA	6	0	intron_retention	FALSE	canonical	1	127	junction_4	129.575530798906	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178147	True	NA	13	True	AATAAA	-24	NA	36224448	36305357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301555_36301697_36303795
WTC11_00006287	chr1	+	2104	3	NNC	ENSG00000214193.11	novel	895	2	NA	NA	-209	115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAAAACAAGCCTTTC	36326068	False	NA	NA	False	NA	NA	NA	36326087	36329455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_36326375_36326466_36326548_36327719
WTC11_00006289	chr1	+	593	4	FSM	ENSG00000224592.5	ENST00000432922.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.46337971105226	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCTGGGATTACAGGT	38047028	False	NA	NA	False	NA	NA	NA	38047313	38105734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38047615_38102423_38102497_38103545_38103662_38105631
WTC11_00006292	chr1	+	3458	2	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	38423760	True	NA	10	True	AATAAA	-18	NA	38425418	38430739	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427535
WTC11_00006293	chr1	+	707	3	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_2	30.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	38423773	True	NA	14	True	AATAAA	-22	NA	38425431	38430743	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427538_38427623_38430361
WTC11_00006294	chr1	+	702	3	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	8	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	38423780	True	NA	10	True	AATAAA	-18	NA	38425438	38430739	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427535_38427623_38430358
WTC11_00006296	chr1	+	17573	93	NIC	ENSG00000127603.32	novel	14496	71	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_64	135.270461764891	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	39102123	True	NA	NA	False	ATTAAA	-21	NA	39105410	39486987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645_39324735_39327217_39327354_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00006298	chr1	+	12933	58	NIC	ENSG00000127603.32	novel	19141	64	NA	NA	-1720	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	136.938450114382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATTTCCTGATTTT	39346826	True	NA	NA	False	ATTAAA	-20	NA	39347124	39486986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39347211_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00006299	chr1	+	12510	42	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	-440	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	103.540259637755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTGTTTAAGGAACTC	39406143	True	NA	10	True	ATTAAA	-13	NA	39409062	39486217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39465094_39465113_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00006300	chr1	+	11232	41	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	1589	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	100.140273491738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATTTCCTGATTTT	39411080	False	NA	NA	False	ATTAAA	-20	NA	39411091	39486986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00006302	chr1	+	1241	10	NIC	ENSG00000084072.17	novel	4339	10	NA	NA	0	-9	combination_of_known_junctions	TRUE	canonical	3	112	junction_6	238.098537543276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTAGTTCTTGGGAG	39734480	True	NA	23	True	AATAAA	-21	NA	39738878	39753707	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
WTC11_00006303	chr1	+	1220	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	-22	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	335.512443882489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734480	True	NA	10	True	AATAAA	-18	NA	39738878	39763914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
WTC11_00006304	chr1	+	1085	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	-6	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	265.511851354844	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734480	True	NA	10	True	AATAAA	-18	NA	39738878	39763914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
WTC11_00006305	chr1	+	1251	10	NIC	ENSG00000084072.17	novel	4339	10	NA	NA	4	-15	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	248.306461384782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTCCTGCTAGTTCT	39734495	True	NA	17	True	AATAAA	-15	NA	39738893	39753701	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
WTC11_00006306	chr1	+	969	7	FSM	ENSG00000168389.18	ENST00000434861.5	946	7	-23	0	11	0	multi-exon	FALSE	canonical	2	3	junction_1	21.7562251627743	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGGTGCCTGGGAAG	39953120	True	NA	NA	False	NA	NA	NA	39955122	39966691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39955380_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600
WTC11_00006307	chr1	+	253	1	FSM	ENSG00000228477.1	ENST00000438210.1	725	1	150	322	150	-322	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTTGCAAGGTGACAG	39960827	False	NA	NA	False	NA	NA	NA	39962829	39963082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39962800_39963100
WTC11_00006309	chr1	+	362	2	FSM	ENSG00000084070.12	ENST00000487871.1	362	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCAGAAAGGTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	40413976	40415369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40414241_40415271
WTC11_00006310	chr1	+	2041	5	NNC	ENSG00000187801.15	novel	2109	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	10.6858551365813	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCCCAACTCTTAAT	40449443	True	NA	11	True	ATTAAA	-17	NA	40450088	40463715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_40450176_40450655_40451089_40456944_40457072_40457340_40457440_40462420
WTC11_00006311	chr1	+	938	1	FSM	ENSG00000279667.1	ENST00000624658.1	1005	1	-1	68	-1	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTCATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	40473053	40473991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40473100_40474000
WTC11_00006312	chr1	+	1999	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	-35	-1402	-19	0	multi-exon	FALSE	canonical	2	7	junction_1	21.7613316585993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	40530746	True	NA	6	True	AATAAA	-17	NA	40531617	40548167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
WTC11_00006313	chr1	+	1379	9	FSM	ENSG00000066136.21	ENST00000427410.6	1379	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	89.9234917860733	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTGTGGTTGAAGAAAT	40689373	True	NA	24	True	ATTAAA	-33	NA	40691688	40771126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
WTC11_00006315	chr1	+	3248	19	NIC	ENSG00000171793.16	novel	2037	18	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	86.3552095835695	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	40979991	False	NA	NA	False	AATAAA	-22	NA	40980019	41012565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_40980562_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
WTC11_00006316	chr1	+	976	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	-10	0	-10	0	multi-exon	FALSE	canonical	2	13	junction_1	321	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	42456075	True	NA	NA	False	NA	NA	NA	42456106	42460081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42456500_42457246_42457351_42459602
WTC11_00006317	chr1	+	1442	2	FSM	ENSG00000186409.18	ENST00000670292.1	2743	2	1151	150	0	74	multi-exon	FALSE	canonical	2	8	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTTTAATCCGT	NA	False	NA	NA	False	TATAAA	-24	NA	42480460	42483998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42480567_42482662
WTC11_00006318	chr1	+	754	5	FSM	ENSG00000186409.18	ENST00000514642.1	6827	5	-17	6090	-17	22	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAAAGTAAATAGACAT	NA	False	NA	NA	False	AAAAAG	-14	NA	42536555	42589483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42536602_42566295_42566476_42577019_42577230_42581359_42581515_42589320
WTC11_00006319	chr1	+	937	11	FSM	ENSG00000171960.12	ENST00000678038.1	937	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_9	178.06754336487	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTATGTTTTTTTT	NA	False	NA	8	True	AATAAA	-8	NA	42658334	42676748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42668046_42668152_42676583
WTC11_00006320	chr1	+	923	11	FSM	ENSG00000171960.12	ENST00000372550.6	923	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	177.27461747244	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	NA	False	NA	17	True	AATAAA	-17	NA	42658334	42676757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675366_42675449_42676583
WTC11_00006321	chr1	+	2072	10	FSM	ENSG00000171960.12	ENST00000676675.1	2060	10	-12	0	-12	0	multi-exon	FALSE	canonical	3	5	junction_9	142.261713267233	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTAAGTTTTCAACTG	42658330	False	NA	-27	True	NA	NA	NA	42658355	42676713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675287
WTC11_00006322	chr1	+	1049	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	-13	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	140.722562178823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	42647832	True	NA	NA	False	NA	NA	NA	42658422	42676202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
WTC11_00006323	chr1	+	1016	7	NIC	ENSG00000283580.4	novel	1008	5	NA	NA	-30	-1590	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	77.6609439951783	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCAGGCCCCAGGCCC	42765251	True	NA	NA	False	NA	NA	NA	42767261	42792903	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208_42775523_42789795_42789935_42792804
WTC11_00006324	chr1	+	3457	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	-17	0	-17	0	multi-exon	FALSE	canonical	1	1	junction_2	2.96536480550911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	42816821	True	NA	21	True	AATAAA	-22	NA	42817104	42844991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
WTC11_00006325	chr1	+	1241	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	-112	-5	-112	5	multi-exon	FALSE	canonical	2	7	junction_2	3.85861230093008	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGCTTTATTTTCGTCC	42958920	False	NA	10	True	AATAAA	-22	NA	42958936	42983363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
WTC11_00006327	chr1	+	499	4	FSM	ENSG00000186973.11	ENST00000410048.5	500	4	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCACTTTTCTCATTTC	NA	False	NA	8	True	AATAAA	-18	NA	43145152	43156395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43145298_43150760_43150821_43152827_43152932_43156205
WTC11_00006328	chr1	+	475	3	FSM	ENSG00000186973.11	ENST00000409337.5	476	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCACTTTTCTCATTTC	43147853	False	NA	8	True	AATAAA	-18	NA	43147866	43156395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43148092_43150760_43150821_43156205
WTC11_00006329	chr1	+	1709	4	FSM	ENSG00000179178.11	ENST00000439858.6	1797	4	88	0	24	0	multi-exon	FALSE	canonical	1	5	junction_1	91.6854526204797	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	NA	False	NA	28	True	AATAAA	-29	NA	43270070	43274002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43270086_43270680_43270794_43272183_43272340_43272577
WTC11_00006330	chr1	+	2050	4	NNC	ENSG00000179178.11	novel	1797	4	NA	NA	-255	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	91.3649580285328	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCATCTCAGGATCTCA	43269550	True	NA	21	True	AATAAA	-22	NA	43270690	43273995	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43270794_43270880_43271254_43272183_43272340_43272577
WTC11_00006331	chr1	+	3908	23	FSM	ENSG00000066056.14	ENST00000372476.8	3893	23	-15	0	-15	0	multi-exon	TRUE	canonical	2	4	junction_12	2.08298895225265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTCTACCTTTTACT	43300907	True	NA	NA	False	AATAAA	-18	NA	43300966	43323108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43301130_43304850_43305166_43305232_43305344_43306839_43306996_43307141_43307274_43307431_43307573_43307795_43307925_43308985_43309132_43309387_43309533_43311670_43311830_43311993_43312132_43312304_43312602_43313134_43313426_43313777_43313969_43317198_43317410_43317563_43317675_43317881_43318073_43319234_43319349_43319458_43319530_43321268_43321310_43321395_43321493_43321615_43321716_43322650
WTC11_00006334	chr1	+	3149	22	NNC	ENSG00000066135.13	novel	1023	8	NA	NA	0	-1247	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	60.332675608096	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGGTTAAGCAAGAAAA	43648584	False	NA	5	True	NA	NA	NA	43650535	43704271	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43650550_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
WTC11_00006337	chr1	+	2261	13	FSM	ENSG00000126091.21	ENST00000645165.1	2261	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	13.5113121330075	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGCTCTTCCCTGAGC	43707065	False	NA	-14	True	NA	NA	NA	43707684	43931141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43858134_43858309_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
WTC11_00006339	chr1	+	1458	5	NIC	ENSG00000117407.17	novel	1943	5	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	33.1313673125635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGGCTTGTCAGATC	43932400	True	NA	30	True	NA	NA	NA	43933740	43937240	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43933886_43934111_43934261_43935654_43935717_43936068_43936232_43936301
WTC11_00006341	chr1	+	1439	5	FSM	ENSG00000117407.17	ENST00000372359.10	1439	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	37.5299880095904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGGCTTGTCAGATC	43932460	True	NA	30	True	NA	NA	NA	43933800	43937240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43933886_43934111_43934261_43935589_43935717_43936092_43936232_43936301
WTC11_00006342	chr1	+	1932	8	FSM	ENSG00000117411.18	ENST00000485678.6	1932	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	283.040561022044	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGGGAGGCAGGTGG	43979345	False	NA	NA	False	NA	NA	NA	43979437	43991021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43979512_43981108_43981474_43981688_43981925_43982816_43982931_43984864_43985056_43985277_43985401_43985516_43985622_43990297
WTC11_00006344	chr1	+	2986	5	NIC	ENSG00000159214.13	novel	728	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	9.62743475698485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991030	True	NA	14	True	ATTAAA	-18	NA	43991773	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
WTC11_00006345	chr1	+	1344	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	20	junction_1	33.3870315774107	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991080	True	NA	14	True	ATTAAA	-18	NA	43991823	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
WTC11_00006346	chr1	+	645	2	FSM	ENSG00000230615.8	ENST00000693417.1	678	2	11	22	-6	-22	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGCATCTTTTGATCTA	44030185	True	NA	1	True	AATAAA	-14	NA	44030424	44040426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44030550_44039906
WTC11_00006347	chr1	+	1100	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	-18	-600	-6	425	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGTGCTCTTTAAAAAA	44030185	True	NA	NA	False	NA	NA	NA	44030424	44040873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44030558_44039906
WTC11_00006349	chr1	+	361	4	FSM	ENSG00000187147.18	ENST00000453863.5	361	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	192.267753117596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCCGAGGTACAAGCAG	NA	False	NA	NA	False	NA	NA	NA	44626325	44636152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44626399_44632342_44632386_44635544_44635667_44636029
WTC11_00006350	chr1	+	1982	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	196	junction_6	127.613322188555	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625262	True	NA	NA	False	ATTAAA	-16	NA	44631969	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00006351	chr1	+	669	5	FSM	ENSG00000142937.12	ENST00000497035.5	694	5	25	0	25	0	multi-exon	FALSE	canonical	2	3	junction_1	5672.42282340624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCCTGGAGGAGCAG	44775265	False	NA	45	True	AAAAAG	-14	NA	44775275	44778087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775474_44776033_44776141_44776674_44776775_44777613_44777790_44777999
WTC11_00006352	chr1	+	986	3	FSM	ENSG00000142937.12	ENST00000470475.1	981	3	-5	0	0	0	multi-exon	FALSE	canonical	3	8257	junction_1	2110.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTCATGGGGCTGAAGA	44759519	True	NA	NA	False	NA	NA	NA	44775572	44777525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775601_44776033_44776141_44776674
WTC11_00006353	chr1	+	898	3	FSM	ENSG00000142937.12	ENST00000464658.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	12837	junction_1	144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44775449	False	NA	52	True	AATATA	-21	NA	44777225	44778779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44777790_44777999_44778130_44778575
WTC11_00006354	chr1	+	852	2	FSM	ENSG00000142937.12	ENST00000484599.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCCCGCAAAGGCAAAT	44775773	False	NA	-51	True	NA	NA	NA	44777549	44778663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44777738_44777999
WTC11_00006355	chr1	+	2321	14	NIC	ENSG00000173846.13	novel	2340	15	NA	NA	-119	-8	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	12.0152762725343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAATTGGACTCCCCC	44800133	False	NA	-1	True	AATAAA	-6	NA	44800257	44805982	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44805265_44805380_44805486
WTC11_00006356	chr1	+	1199	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	-22	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	334.045819274841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005186	True	NA	15	True	AATAAA	-16	NA	45012184	45015575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
WTC11_00006357	chr1	+	1124	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	-22	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	342.474725344806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005186	True	NA	15	True	AATAAA	-16	NA	45012184	45015575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
WTC11_00006358	chr1	+	934	4	FSM	ENSG00000126088.14	ENST00000472254.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_1	56.4092191046818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45014033	False	NA	15	True	AATAAA	-16	NA	45014049	45015575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45014577_45014735_45014837_45014939_45015007_45015336
WTC11_00006359	chr1	+	1731	1	FSM	ENSG00000281912.1	ENST00000626198.1	1710	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTCTCAAATTTTCAG	45303711	True	NA	3	True	AATAAA	-18	NA	45303888	45305619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45303900_45305600
WTC11_00006360	chr1	+	449	3	ISM	ENSG00000132763.15	ENST00000616135.1	1510	5	-34	2707	7	-2147	5prime_fragment	FALSE	canonical	3	9	junction_2	3	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGGTGAGAGGGAAAAT	45498384	True	NA	NA	False	NA	NA	NA	45500306	45508358	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_45500414_45507355_45507551_45508211
WTC11_00006362	chr1	+	632	5	FSM	ENSG00000132780.17	ENST00000534450.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	961.780640270951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45615017	False	NA	14	True	AATAAA	-14	NA	45615058	45618247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45618060
WTC11_00006363	chr1	+	4223	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	121	0	13	multi-exon	FALSE	canonical	2	5	junction_2	27.6981497577004	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGATAATCCTTTCAAA	46339927	True	NA	25	True	AATAAA	-27	NA	46340788	46365031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
WTC11_00006364	chr1	+	1944	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-500	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	73.0866760923099	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGTCTGTGTGGTTTCT	46393707	False	NA	NA	False	AAGAAA	-5	NA	46393816	46413847	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
WTC11_00006365	chr1	+	2046	15	NIC	ENSG00000117480.16	novel	2042	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	48.9335763863544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46392584	True	NA	NA	False	AAGAAA	-3	NA	46394264	46413845	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413122_46413221_46413446
WTC11_00006368	chr1	+	738	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	8	-28	0	28	multi-exon	FALSE	canonical	3	29	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTCCTGGTGGTCTTCT	46442377	True	NA	35	True	NA	NA	NA	46442837	46445736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46443038_46445198
WTC11_00006369	chr1	+	471	3	FSM	ENSG00000232022.8	ENST00000455247.2	575	3	86	18	62	-18	multi-exon	FALSE	canonical	2	10	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	46442463	True	NA	-11	True	AATAAA	-3	NA	46442923	46482475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46443038_46455819_46455911_46482209
WTC11_00006370	chr1	+	2879	4	FSM	ENSG00000197587.11	ENST00000371956.8	2882	4	3	0	3	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.85861230093008	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	46506998	46514212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46507165_46510460_46510655_46510934_46511284_46512042
WTC11_00006371	chr1	+	2218	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	38	0	38	0	multi-exon	FALSE	canonical	1	2	junction_11	1.92847303959967	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	47023634	True	NA	4	True	AATAAA	-19	NA	47023706	47050751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
WTC11_00006374	chr1	+	453	1	FSM	ENSG00000234080.3	ENST00000423464.1	877	1	336	88	336	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCCGATCAGGAATTCA	NA	False	NA	NA	False	NA	NA	NA	50326466	50326919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_50326500_50326900
WTC11_00006375	chr1	+	2832	20	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_3	155.425588541293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721712	True	NA	20	True	CATAAA	-29	NA	51729835	51788469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_51730125_51745535_51745632_51746709_51746758_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
WTC11_00006377	chr1	+	5148	19	FSM	ENSG00000157077.16	ENST00000287727.8	5148	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	2.6833965946074	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	52139459	True	NA	2	True	AATAAA	-14	NA	52142088	52346634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52266654_52266832_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
WTC11_00006378	chr1	+	548	1	FSM	ENSG00000272100.1	ENST00000606527.1	391	1	-161	4	-161	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGCTCTGTTCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	52353325	52353873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52353300_52353900
WTC11_00006379	chr1	+	915	3	FSM	ENSG00000182183.15	ENST00000517870.2	924	3	9	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	52633129	False	NA	2	True	AATAAA	-14	NA	52633176	52657065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52633676_52642862_52643003_52656789
WTC11_00006380	chr1	+	3934	3	FSM	ENSG00000116171.19	ENST00000488965.1	3926	3	-8	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	384	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTTTTTACTGTGT	53009283	True	NA	14	True	ATTAAA	-16	NA	53014965	53051610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53015044_53027968_53028072_53047857
WTC11_00006381	chr1	+	2747	6	FSM	ENSG00000157184.7	ENST00000637252.1	2739	6	-8	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	128.023435354626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATTTTTGCTTGAA	53191751	True	NA	-12	True	NA	NA	NA	53196791	53214177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53212780_53212817_53213263
WTC11_00006382	chr1	+	1475	4	FSM	ENSG00000143006.7	ENST00000371445.3	1910	4	435	0	-142	0	multi-exon	FALSE	canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGGAAGGCTTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	53459833	53467488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53460031_53461472_53461646_53464636_53464848_53466594
WTC11_00006383	chr1	+	1831	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	101.591092129182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942436	True	NA	23	True	AATAAA	-19	NA	53946368	53968168	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
WTC11_00006384	chr1	+	3760	1	FSM	ENSG00000198711.5	ENST00000361350.5	2624	1	-991	-145	-991	145	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAACCCACAAGTCGG	NA	False	NA	NA	False	NA	NA	NA	54235448	54239208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54235400_54239200
WTC11_00006385	chr1	+	1898	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	16	-3	intron_retention	FALSE	canonical	3	27	junction_7	86.3487659147483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTAGCTGTGTGAC	54713630	True	NA	9	True	NA	NA	NA	54715883	54742304	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
WTC11_00006386	chr1	+	1194	3	FSM	ENSG00000143001.5	ENST00000371268.4	1256	3	62	0	62	0	multi-exon	TRUE	canonical	1	2	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	54980640	False	NA	1	True	AATAAA	-16	NA	54980689	54992288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54981081_54986096_54986447_54991835
WTC11_00006387	chr1	+	1595	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	15.3098181747655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295968	True	NA	8	True	AATAAA	-19	NA	59296795	59762724	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
WTC11_00006388	chr1	+	1959	17	FSM	ENSG00000172456.18	ENST00000371218.8	2052	17	93	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_1	24.0382995186848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59297055	True	NA	8	True	AATAAA	-19	NA	59297073	59762724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59641279_59641352_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
WTC11_00006389	chr1	+	5258	38	NIC	ENSG00000132849.22	novel	8505	43	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_34	22.6387774399083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	61739056	True	NA	15	True	AATAAA	-27	NA	61742489	62117395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62100318_62100409_62108436_62108521_62114052_62114247_62116531_62116680_62117131
WTC11_00006390	chr1	+	481	1	FSM	ENSG00000200575.1	ENST00000363705.1	104	1	-411	34	-411	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGCACAAATTCGTGAAG	NA	False	NA	NA	False	ACTAAA	-42	NA	61816007	61816488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61816000_61816500
WTC11_00006392	chr1	+	499	3	FSM	ENSG00000162607.13	ENST00000442679.5	502	3	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	133	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGCTATCTTAATAGTA	62436286	False	NA	NA	False	NA	NA	NA	62436300	62441580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62436468_62439798_62440038_62441487
WTC11_00006393	chr1	+	613	5	FSM	ENSG00000125703.15	ENST00000443289.5	603	5	-10	0	-7	0	multi-exon	FALSE	canonical	1	2	junction_1	97.5256376549264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTCAAAAAATTTACTG	62782052	True	NA	NA	False	NA	NA	NA	62784124	62819065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62784274_62803777_62803863_62805171_62805256_62816574_62816809_62819004
WTC11_00006394	chr1	+	2423	12	FSM	ENSG00000079739.17	ENST00000650546.1	2423	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	265.876874505276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTTGGGATAATAAA	63586256	True	NA	NA	False	NA	NA	NA	63593410	63660209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63654989_63655112_63659585
WTC11_00006395	chr1	+	2295	11	FSM	ENSG00000079739.17	ENST00000540265.5	2345	11	50	0	50	0	multi-exon	FALSE	canonical	0	0	junction_1	228.365255676077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTGCTTGTCGTCTTTT	63593785	False	NA	NA	False	AATAAA	-13	NA	63593858	63660241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63594145_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
WTC11_00006396	chr1	+	787	1	FSM	ENSG00000244256.3	ENST00000489463.3	305	1	-630	148	-630	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAACCACCAGGTTGCA	63655087	False	NA	NA	False	NA	NA	NA	63655112	63655899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63655100_63655900
WTC11_00006397	chr1	+	5579	8	NIC	ENSG00000185483.13	novel	5858	9	NA	NA	389	187	combination_of_known_splicesites	FALSE	canonical	2	31	junction_1	290.285925196774	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAACTGAATACTATCC	63774396	False	NA	84	True	NA	NA	NA	63774410	64181685	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_63774509_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404_64142651_64158980_64159193_64177427
WTC11_00006400	chr1	+	5200	20	FSM	ENSG00000116678.20	ENST00000371060.7	5135	20	-65	0	-65	0	multi-exon	FALSE	canonical	2	18	junction_2	44.070329086781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTGTATTTGTCT	65417583	True	NA	13	True	TATAAA	-15	NA	65420586	65635428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65420741_65425302_65425379_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65633151
WTC11_00006401	chr1	+	5293	20	NNC	ENSG00000116678.20	novel	2805	18	NA	NA	-1450	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.36989935113582	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTGTATTTGTCT	65564044	True	NA	13	True	TATAAA	-15	NA	65564095	65635428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_65564320_65564707_65564807_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65633151
WTC11_00006402	chr1	+	2359	5	FSM	ENSG00000152760.10	ENST00000282670.7	2262	5	-110	13	-110	-13	multi-exon	FALSE	canonical	2	4	junction_4	2.6809513236909	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAACATATACAAAGTC	66752195	True	NA	NA	False	AATAAA	-17	NA	66752348	66779034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66776278_66776404_66777250
WTC11_00006405	chr1	+	3875	16	FSM	ENSG00000198160.15	ENST00000371018.7	3875	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	39.5839473636585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66925096_66926141_66926243_66928889_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
WTC11_00006406	chr1	+	4965	15	NNC	ENSG00000198160.15	novel	1728	15	NA	NA	0	785	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	29.5282638728886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTCAGCAAAGTTAGATGA	NA	False	NA	NA	False	AATAAA	-7	NA	66924894	66989404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_66925535_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
WTC11_00006407	chr1	+	1305	3	FSM	ENSG00000116717.13	ENST00000370985.4	902	3	-53	-350	-53	2	multi-exon	FALSE	canonical	3	8	junction_1	76	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATTGTGTGCTCTTGTT	NA	False	NA	14	True	AATAAA	-24	NA	67685147	67688336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_67685539_67686349_67686588_67687660
WTC11_00006409	chr1	+	3499	11	ISM	ENSG00000116754.14	ENST00000370949.2	3959	12	7042	0	0	0	3prime_fragment	FALSE	canonical	3	674	junction_10	135.223370761123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70228398	False	NA	20	True	AATAAA	-21	NA	70228421	70253052	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
WTC11_00006410	chr1	+	881	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	-9	-4	-2	0	multi-exon	FALSE	canonical	2	14	junction_2	11.2249721603218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353921	True	NA	17	True	ATTAAA	-22	NA	70354783	70368023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
WTC11_00006411	chr1	+	815	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	28	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353935	True	NA	17	True	ATTAAA	-22	NA	70354797	70368023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355112_70366443_70366538_70367616
WTC11_00006412	chr1	+	912	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	-14	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	42	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353935	True	NA	17	True	ATTAAA	-22	NA	70354797	70368023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355209_70366443_70366538_70367616
WTC11_00006413	chr1	+	850	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	13	0	-1	0	multi-exon	FALSE	canonical	2	14	junction_2	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353948	True	NA	17	True	ATTAAA	-22	NA	70354810	70368023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
WTC11_00006414	chr1	+	466	1	FSM	ENSG00000271992.1	ENST00000607679.1	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCGTGGTTTAGATTT	NA	False	NA	5	True	AATAAA	-15	NA	70445070	70445536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70445100_70445500
WTC11_00006415	chr1	+	275	2	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCCACCGCACCAGCC	NA	False	NA	NA	False	NA	NA	NA	71275686	71277160	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_71275947_71277145
WTC11_00006418	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	89.6813804532468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	74729581	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
WTC11_00006419	chr1	+	464	1	FSM	ENSG00000162624.15	ENST00000607240.1	2244	1	1747	33	1747	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAACATTTTCCATTC	NA	False	NA	NA	False	NA	NA	NA	75161034	75161498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75161000_75161500
WTC11_00006420	chr1	+	3481	10	FSM	ENSG00000117054.15	ENST00000681621.1	3481	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	155.838552101165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGGTAGCCTTTGGT	75724151	False	NA	26	True	AATAAA	-41	NA	75724430	75763401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121
WTC11_00006421	chr1	+	2355	11	FSM	ENSG00000117054.15	ENST00000679976.1	2355	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	151.229792038474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00006422	chr1	+	2359	11	FSM	ENSG00000117054.15	ENST00000680691.1	2359	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	197.952620593919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732746_75732852_75732923_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00006423	chr1	+	1181	9	NNC	ENSG00000137955.16	novel	1448	9	NA	NA	-4	-20	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_8	183.255797998317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTATACATATTGTAAAA	75777561	True	NA	-8	True	AATAAA	-6	NA	75786223	75794783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794238_75794509
WTC11_00006424	chr1	+	1527	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	43	junction_1	177.173599542934	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	75786670	True	NA	31	True	AATAAA	-24	NA	75786699	75795086	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
WTC11_00006426	chr1	+	954	1	FSM	ENSG00000272855.1	ENST00000608243.1	463	1	-123	-368	-123	368	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATAGCAATGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	76636753	76637707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76636800_76637700
WTC11_00006427	chr1	+	1813	3	ISM	ENSG00000117069.15	ENST00000318803.6	2055	5	-52	18551	-52	-4809	5prime_fragment	FALSE	canonical	3	29	junction_2	10.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTGTGTCTCAATC	76866476	True	NA	NA	False	AATAAA	-40	NA	76867427	77045507	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_76867691_76868496_76868743_77044203
WTC11_00006428	chr1	+	488	3	FSM	ENSG00000154027.19	ENST00000466114.1	530	3	0	42	0	-42	multi-exon	FALSE	canonical	3	31	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTTAAAATTTTGGGAA	NA	False	NA	NA	False	AATGAA	-7	NA	77293792	77297983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77293961_77297558_77297729_77297833
WTC11_00006431	chr1	+	3205	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	75.3760940587635	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	77975757	True	NA	5	True	TATAAA	-16	NA	77979176	78017964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
WTC11_00006432	chr1	+	2581	3	NIC	ENSG00000162616.9	novel	906	2	NA	NA	278	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	82	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	77979504	False	NA	5	True	TATAAA	-16	NA	77979558	78017964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77979620_78013050_78013620_78016013
WTC11_00006434	chr1	+	981	2	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGTGCATGAAAATACAAAT	NA	False	NA	52	True	NA	NA	NA	81245290	81251197	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81250807
WTC11_00006435	chr1	+	898	3	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	56.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	81241824	True	NA	28	True	AATAAA	-24	NA	81245637	81251173	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81247702_81247991_81250807
WTC11_00006436	chr1	+	1514	3	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	61.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	81241824	True	NA	28	True	AATAAA	-24	NA	81245637	81251173	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81247086_81247991_81250807
WTC11_00006439	chr1	+	5725	22	NNC	ENSG00000117114.21	novel	5873	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	130.990003253611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTGACAGTAAATAAATG	81799936	False	NA	-26	True	NA	NA	NA	81800395	81992387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942030_81942046_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00006440	chr1	+	5834	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	393	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	111.542099675414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTGACAGTAAATAAATG	81801310	True	NA	-26	True	NA	NA	NA	81801390	81992387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81801656_81836884_81837058_81907016_81907231_81936727_81936838_81942030_81942046_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00006441	chr1	+	5787	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	468	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	102.181651973336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATTGTCATTAAAATAA	81800125	True	NA	NA	False	AATAAA	-22	NA	81801465	81991817	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00006444	chr1	+	1668	9	NIC	ENSG00000142875.20	novel	1905	9	NA	NA	98	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	33.248120247617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTAGAATGTGTCTC	84076388	False	NA	6	True	AATAAA	-22	NA	84078241	84205297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204478
WTC11_00006446	chr1	+	1464	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	103	0	103	0	multi-exon	FALSE	canonical	2	7	junction_1	2.49443825784929	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	84298127	True	NA	17	True	AATAAA	-17	NA	84298468	84350798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
WTC11_00006447	chr1	+	6475	10	FSM	ENSG00000097033.14	ENST00000616170.4	6456	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	10	junction_6	93.7478888651188	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	86704512	False	NA	1	True	AATAAA	-8	NA	86704550	86748176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728490_86734601_86734692_86735078_86735180_86742207_86742437_86743127
WTC11_00006449	chr1	+	555	1	FSM	ENSG00000230721.1	ENST00000447415.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	86784898	False	NA	NA	False	AAGAAA	-34	NA	86784912	86785467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_86784900_86785500
WTC11_00006452	chr1	+	4209	2	FSM	ENSG00000267272.5	ENST00000467438.1	2375	2	478	-2312	398	238	multi-exon	FALSE	canonical	2	11	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACATGGATGCGTATTT	87132375	False	NA	1	True	AATAAA	-11	NA	87132452	87136907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_87133719_87133964
WTC11_00006455	chr1	+	3701	2	FSM	ENSG00000171492.14	ENST00000441269.2	905	2	-63	-2733	-63	14	multi-exon	FALSE	canonical	1	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTTTGTGCAGCTA	89846484	False	NA	NA	False	NA	NA	NA	89846516	89936625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89846659_89933066
WTC11_00006456	chr1	+	1206	1	FSM	ENSG00000272672.1	ENST00000608671.1	547	1	-662	3	-662	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCAGTGGTGCATGCC	89938923	False	NA	NA	False	AATAAA	-17	NA	89938938	89940144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89938900_89940100
WTC11_00006457	chr1	+	1719	12	NNC	ENSG00000162664.17	novel	9729	12	NA	NA	-5	-420	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	61.9945345498261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCACATATTAAAATTTG	89989098	True	NA	-26	True	AAGAAA	-42	NA	89995128	90027806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007608_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
WTC11_00006458	chr1	+	845	1	FSM	ENSG00000232393.1	ENST00000425640.1	886	1	108	-67	108	67	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACAGGCAACTGAAAAAA	91024014	False	NA	NA	False	AATAAA	-19	NA	91024026	91024871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91024000_91024900
WTC11_00006460	chr1	+	981	1	FSM	ENSG00000203914.4	ENST00000415545.2	1567	1	456	130	456	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCAAAGAAGAACTTGAA	NA	False	NA	NA	False	NA	NA	NA	91642971	91643952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91643000_91644000
WTC11_00006462	chr1	+	7324	17	ISM	ENSG00000189195.15	ENST00000636805.2	5999	18	-58	1	-18	0	intron_retention	TRUE	canonical	2	5	junction_15	3.29239179776648	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTAGAGTTTTCTGT	NA	False	NA	2	True	AATAAA	-21	NA	92080286	92184722	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349_92139431_92141114_92141212_92147179_92147269_92147683_92147787_92166957_92167141_92167847_92167986_92168865_92168996_92171398_92171461_92176828_92177547_92177810_92177899_92178311_92178452_92180264
WTC11_00006463	chr1	+	1163	1	FSM	ENSG00000223896.2	ENST00000457810.2	1163	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGTGTAAGGGTAATA	NA	False	NA	NA	False	AATGAA	-35	NA	92755793	92756956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92755800_92757000
WTC11_00006464	chr1	+	1291	3	FSM	ENSG00000122406.14	ENST00000497519.1	1210	3	-108	27	-108	0	multi-exon	FALSE	canonical	3	5844	junction_1	887	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	92834914	False	NA	-15	True	NA	NA	NA	92836501	92841835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92837634_92840550_92840640_92841765
WTC11_00006465	chr1	+	1021	9	FSM	ENSG00000143033.18	ENST00000494963.5	885	9	-73	-63	-12	0	multi-exon	FALSE	canonical	0	0	junction_4	263.866413882101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGACCTTTCTGT	93066720	True	NA	NA	False	NA	NA	NA	93079222	93119401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
WTC11_00006466	chr1	+	4058	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_4	208.157910144091	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066720	True	NA	36	True	ATTAAA	-39	NA	93079222	93139079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00006468	chr1	+	4079	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	93066780	True	NA	33	True	ATTAAA	-36	NA	93079282	93139076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00006471	chr1	+	3920	14	NIC	ENSG00000143033.18	novel	1937	14	NA	NA	0	-7	intron_retention	FALSE	canonical	3	36	junction_8	199.672098064707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTAATGAGTTTT	93066808	True	NA	26	True	ATTAAA	-29	NA	93079310	93139069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
WTC11_00006473	chr1	+	4165	28	NIC	ENSG00000122483.18	novel	4552	28	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	34	junction_27	18.4197365372447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	93178385	True	NA	NA	False	AATAAA	-21	NA	93180719	93278607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
WTC11_00006474	chr1	+	217	1	FSM	ENSG00000211575.3	ENST00000390220.3	80	1	-190	53	-190	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGGATACCTCAGAAAT	93846601	False	NA	NA	False	NA	NA	NA	93846641	93846858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93846600_93846900
WTC11_00006476	chr1	+	2394	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	-15	2	0	-2	multi-exon	TRUE	canonical	3	11	junction_5	3.68394198806504	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTTAGCAGAAATCT	94820122	True	NA	NA	False	AATAAA	-20	NA	94820341	94895244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
WTC11_00006479	chr1	+	1237	4	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	88.035346436657	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231868	True	NA	4	True	ATTAAA	-16	NA	95234167	95247223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95244210_95244716_95246541_95246658_95246755
WTC11_00006480	chr1	+	1480	5	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-42	172	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	81.3921832856202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGCTTTTTGAGGGTG	95231868	True	NA	NA	False	TATAAA	-10	NA	95234167	95247397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95239776_95239910_95244210_95244652_95246541_95246658_95246755
WTC11_00006482	chr1	+	1062	3	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231910	True	NA	4	True	ATTAAA	-16	NA	95234209	95247223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95244210_95244699_95246755
WTC11_00006484	chr1	+	12014	14	FSM	ENSG00000117569.19	ENST00000609116.5	12014	14	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_13	36.9999200382952	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTTTCTTGA	96717265	True	NA	13	True	ATTAAA	-15	NA	96721782	96823738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
WTC11_00006485	chr1	+	7265	4	NIC	ENSG00000117569.19	novel	3057	14	NA	NA	-5301	0	intron_retention	FALSE	canonical	3	95	junction_3	66.9941954367856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	13	True	ATTAAA	-19	NA	96801509	96814793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_96806959_96812711_96812929_96813028_96813107_96813272
WTC11_00006486	chr1	+	7189	34	NNC	ENSG00000162688.17	novel	7179	34	NA	NA	-412	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	27.0806366532011	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	99849839	False	NA	11	True	AATAAA	-18	NA	99849948	99924020	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_99850102_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
WTC11_00006488	chr1	+	1182	6	ISM	ENSG00000117620.15	ENST00000639994.1	1114	7	-2	2195	2	-6	5prime_fragment	TRUE	canonical	3	71	junction_5	10.0399203184089	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATATAACTTTTGATT	99967031	True	NA	NA	False	AATAAA	-16	NA	99970017	100015686	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301
WTC11_00006490	chr1	+	363	1	FSM	ENSG00000226952.1	ENST00000443135.1	252	1	23	-134	23	134	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATAAACTGAGTCACATT	NA	False	NA	NA	False	NA	NA	NA	100099261	100099624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100099300_100099600
WTC11_00006491	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	100894711	True	NA	5	True	ATTAAA	-17	NA	100894927	100895356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100894900_100895400
WTC11_00006493	chr1	+	1326	6	FSM	ENSG00000233184.8	ENST00000655226.1	1321	6	-5	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_4	4.02988833592198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATGGCCGATGGCAGA	101025245	True	NA	-65	True	ATTAAA	-22	NA	101025884	101087193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101080388_101080614_101083460_101083575_101086851
WTC11_00006494	chr1	+	1054	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	56	94	0	-22	multi-exon	FALSE	canonical	2	5	junction_1	2.9474565306379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	101025270	True	NA	-87	True	NA	NA	NA	101025909	101087171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
WTC11_00006495	chr1	+	1889	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	18.2252571998312	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103524396	True	NA	NA	False	AATAAA	-21	NA	103525710	103555239	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
WTC11_00006498	chr1	+	494	1	FSM	ENSG00000232952.1	ENST00000415279.1	1779	1	1211	74	1211	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCTGTCTGAGAAATAT	NA	False	NA	NA	False	AAAAAG	-31	NA	105892949	105893443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_105892900_105893400
WTC11_00006500	chr1	+	2808	3	FSM	ENSG00000215717.7	ENST00000651489.1	2808	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	64	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCCCTACAGTCTTTG	109089519	True	NA	3	True	AATAAA	-4	NA	109090772	109096921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109090883_109092889_109093083_109094416
WTC11_00006501	chr1	+	6835	22	FSM	ENSG00000116299.17	ENST00000369939.8	6880	22	2	43	2	-43	multi-exon	TRUE	canonical	0	0	junction_7	1.90237946242268	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCACTTTTTTTTTTTG	109114094	False	NA	NA	False	NA	NA	NA	109114116	109206738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109114337_109161893_109162015_109164498_109164692_109171865_109172014_109172487_109172569_109173473_109173580_109173687_109173838_109185044_109185134_109188176_109188355_109189065_109189195_109189591_109189683_109191365_109191472_109191725_109191864_109192610_109192875_109194420_109194595_109197473_109197655_109197978_109198076_109198572_109198675_109199853_109199981_109200058_109200238_109200734_109200901_109202943
WTC11_00006502	chr1	+	10372	35	NNC	ENSG00000143126.8	novel	11015	34	NA	NA	30	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.1676848212521	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTCCGCTTCTGTG	109248999	True	NA	13	True	AATAAA	-24	NA	109249568	109275757	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_109251184_109251663_109253390_109258431_109259080_109261041_109261265_109261512_109261629_109261807_109261897_109262286_109262445_109262805_109262970_109263141_109263268_109263610_109263778_109264077_109264366_109264453_109264629_109264867_109265010_109265190_109265312_109265734_109265919_109266104_109266207_109267547_109267643_109267850_109268061_109268580_109268765_109268879_109269009_109269109_109269291_109269423_109269592_109269693_109269821_109269932_109270134_109270425_109270601_109270926_109271040_109271216_109271297_109271385_109271513_109271599_109271723_109272277_109272406_109272639_109272729_109272832_109273028_109273165_109273337_109273435_109273671_109274160
WTC11_00006503	chr1	+	11252	33	ISM	ENSG00000143126.8	ENST00000271332.4	11015	34	119	-5	119	5	intron_retention	FALSE	canonical	3	22	junction_5	22.6535558742993	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCACTGTCCGCTTCTGT	109249088	False	NA	12	True	AATAAA	-23	NA	109249657	109275756	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_109253390_109258431_109259080_109261041_109261265_109261512_109261629_109261807_109261897_109262286_109262445_109262805_109262970_109263141_109263268_109263610_109263778_109264077_109264366_109264453_109264629_109264867_109265010_109265190_109265312_109265734_109265919_109266104_109266207_109267547_109267643_109267850_109268061_109268580_109268765_109268879_109269009_109269109_109269291_109269423_109269592_109269693_109269821_109269932_109270134_109270425_109270601_109270926_109271040_109271216_109271297_109271385_109271513_109271599_109271723_109272277_109272406_109272639_109272729_109272832_109273028_109273165_109273337_109273435
WTC11_00006504	chr1	+	329	3	FSM	ENSG00000143126.8	ENST00000459940.1	562	3	0	233	0	-233	multi-exon	FALSE	canonical	3	52	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTGGAGGCCCCGA	109265258	False	NA	NA	False	NA	NA	NA	109265268	109266206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109265312_109265734_109265919_109266104
WTC11_00006505	chr1	+	5036	5	ISM	ENSG00000143028.9	ENST00000369872.4	3703	6	20	15	20	-15	intron_retention	TRUE	canonical	2	6	junction_4	2.73861278752583	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTGCCATGAAGGATC	109466331	True	NA	2	True	AATAAA	-11	NA	109466565	109482119	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_109466898_109467058_109467134_109475580_109475706_109476775_109476978_109477817
WTC11_00006506	chr1	+	3668	1	FSM	ENSG00000116337.20	ENST00000673915.1	2221	1	-1448	1	-1448	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAATGGCTGTATTTC	NA	False	NA	8	True	ATTAAA	-17	NA	109614655	109618323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109614700_109618300
WTC11_00006507	chr1	+	473	1	ISM	ENSG00000134184.13	ENST00000309851.10	1164	8	5456	0	5415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	109693272	109693745	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_109693300_109693700
WTC11_00006508	chr1	+	4139	4	FSM	ENSG00000116396.15	ENST00000438661.3	4139	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.0485374896143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGCCTCTGCCTCTCC	110209977	True	NA	24	True	AATAAA	-36	NA	110210313	110234044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232910
WTC11_00006509	chr1	+	3487	5	FSM	ENSG00000116396.15	ENST00000469655.5	3487	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	15.6604597633658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGCCTCTGCCTCTCC	110211326	False	NA	24	True	AATAAA	-36	NA	110211342	110234044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232220_110232598_110232910
WTC11_00006510	chr1	+	3358	1	FSM	ENSG00000273373.1	ENST00000609909.1	2850	1	-506	-2	-506	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTGTGGTAGTCTAT	110369630	False	NA	23	True	AATAAA	-34	NA	110369647	110373005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110369600_110373000
WTC11_00006511	chr1	+	791	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	26	0	-24	multi-exon	FALSE	canonical	3	8	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGATAAATTCACTAGAA	NA	False	NA	NA	False	TATAAA	-3	NA	110407524	110416248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110407955_110412172_110412294_110416008
WTC11_00006512	chr1	+	365	1	FSM	ENSG00000273010.1	ENST00000609118.1	1348	1	320	663	320	-663	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGACTCCGCCGGAGC	NA	False	NA	NA	False	NA	NA	NA	110963621	110963986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110963600_110964000
WTC11_00006513	chr1	+	717	3	FSM	ENSG00000173947.14	ENST00000468395.1	679	3	-38	0	-38	0	multi-exon	FALSE	canonical	3	46	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTGGTGTACACGT	111347753	False	NA	21	True	CATAAA	-29	NA	111348302	111351513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111348647_111350105_111350224_111351258
WTC11_00006518	chr1	+	214	3	FSM	ENSG00000224167.3	ENST00000456651.1	587	3	369	4	321	0	multi-exon	FALSE	canonical	1	4	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	112850352	False	NA	3	True	AATAAA	-12	NA	112850396	112877867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112850428_112876939_112876985_112877729
WTC11_00006519	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	14	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955864	True	NA	18	True	AATAAA	-15	NA	112956414	112964072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112956957_112960476_112960576_112963971
WTC11_00006520	chr1	+	8243	16	NIC	ENSG00000163349.22	novel	8157	16	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	17.9473303492934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTTTTTGACTTCT	113928626	True	NA	21	True	AATAAA	-22	NA	113929620	113977804	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_113929940_113940381_113941460_113952765_113952890_113954650_113954771_113955562_113955650_113956626_113956812_113957123_113957287_113958065_113958292_113962316_113962439_113963386_113963522_113966132_113966273_113967765_113967949_113968441_113968649_113969955_113970198_113971823_113971955_113973023
WTC11_00006521	chr1	+	1987	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	-53	0	-3	0	multi-exon	FALSE	canonical	2	4	junction_2	199.486006192581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972742	True	NA	19	True	ATTAAA	-18	NA	113979387	113982254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
WTC11_00006522	chr1	+	2080	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	-17	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972828	True	NA	19	True	ATTAAA	-18	NA	113979473	113982254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113979631_113980331
WTC11_00006523	chr1	+	1634	4	ISM	ENSG00000173218.15	ENST00000355485.7	8671	8	-66	33451	-66	-19306	5prime_fragment	FALSE	canonical	3	105	junction_1	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAGACTCCAAATGTGT	115639596	True	NA	4	True	AATAAA	-14	NA	115641903	115664770	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_115642087_115651276_115651485_115659640_115659774_115663660
WTC11_00006524	chr1	+	8749	8	FSM	ENSG00000173218.15	ENST00000310260.7	2265	8	-112	-6372	-112	2	multi-exon	FALSE	canonical	2	4	junction_1	36.1956136704379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTCTTTTCTTCATG	115640209	False	NA	17	True	AATAAA	-19	NA	115642516	115698226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_115642707_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
WTC11_00006525	chr1	+	4705	12	FSM	ENSG00000163393.13	ENST00000369503.9	4705	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.56702214268904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTTTTTTGTTCTCCC	115976414	True	NA	NA	False	AATAAA	-16	NA	115976512	116070054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064509_116066519_116066709_116067018
WTC11_00006526	chr1	+	1230	6	FSM	ENSG00000163393.13	ENST00000369502.1	1230	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	6.28012738724303	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAAAGCAAA	115976599	True	NA	NA	False	CATAAA	-30	NA	115976613	116031890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031402
WTC11_00006527	chr1	+	3956	12	NNC	ENSG00000163393.13	novel	4705	12	NA	NA	0	-652	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	5.82244162240215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGACAGGTAATGTATT	115976599	True	NA	2	True	ATTAAA	-16	NA	115976613	116069402	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064513_116066519_116066709_116067018
WTC11_00006530	chr1	+	6074	9	NNC	ENSG00000134247.10	novel	6314	9	NA	NA	-168	5	intron_retention	FALSE	canonical	1	2	junction_4	27.0852242929609	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAGGAGCTTGATA	116909732	False	NA	14	True	ATTAAA	-22	NA	116909747	116990358	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_116910253_116941714_116942084_116944678_116945093_116949191_116949296_116961378_116961669_116966910_116967331_116974215_116974324_116984679_116984986_116986800
WTC11_00006531	chr1	+	584	2	Antisense	novelGene_ENSG00000227712.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGTGCAGAGCTTTT	119294966	True	NA	NA	False	TATAAA	-45	NA	119295024	119299629	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_119295124_119299144
WTC11_00006532	chr1	+	391	4	FSM	ENSG00000232650.6	ENST00000457683.1	391	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.01387685344754	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCCACTCTGCTTTT	119328168	False	NA	NA	False	NA	NA	NA	119328251	119356182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119328288_119328743_119328790_119354416_119354534_119355990
WTC11_00006533	chr1	+	2389	2	Antisense	novelGene_ENSG00000260941.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACTTGACATTCAATTA	NA	False	NA	NA	False	NA	NA	NA	119573437	119613334	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_119573546_119611053
WTC11_00006534	chr1	+	2053	13	FSM	ENSG00000092621.13	ENST00000641213.1	2053	13	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_3	885.02408943988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675469	True	NA	10	True	AATAAA	-1	NA	119711883	119744201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119724318_119724470_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
WTC11_00006535	chr1	+	2299	11	FSM	ENSG00000092621.13	ENST00000369407.3	3180	11	881	0	-768	0	multi-exon	FALSE	canonical	3	2221	junction_2	106.366348061781	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTCTGCACTTTTGT	119720461	False	NA	22	True	AATAAA	-13	NA	119720507	119744213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
WTC11_00006537	chr1	+	3648	15	ISM	ENSG00000270231.4	ENST00000583271.5	5330	25	12839	-78	12839	78	3prime_fragment	FALSE	canonical	0	0	junction_1	74.654168657612	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAATTAATAAAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	120449191	120467817	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_120449403_120451179_120451283_120452116_120452332_120453371_120453445_120453908_120454115_120455408_120455461_120459366_120459531_120460572_120460625_120461253_120461427_120462145_120462198_120462793_120462967_120463675_120463728_120464375_120464549_120465262_120465372_120465977
WTC11_00006538	chr1	+	1067	5	FSM	ENSG00000286106.2	ENST00000624419.2	1111	5	44	0	44	0	multi-exon	FALSE	canonical	2	3	junction_4	7.56637297521078	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	120723861	False	NA	NA	False	AATAAA	-16	NA	120723989	120793874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120724251_120763627_120763710_120784973_120785234_120793160_120793497_120793746
WTC11_00006539	chr1	+	1241	9	NIC	ENSG00000273136.8	novel	3671	22	NA	NA	16532	-1569	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	107.366705151085	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAAACTCTAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	120830437	120839050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120830589_120831297_120831350_120831987_120832161_120832874_120832984_120833602_120833776_120834494_120834547_120837168_120837342_120838050_120838103_120838744
WTC11_00006540	chr1	+	651	3	NIC	ENSG00000226067.7	novel	692	3	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	29.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913212	False	NA	NA	False	AATAAA	-28	NA	120913227	120953460	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120913451_120952438_120952626_120953219
WTC11_00006543	chr1	+	1021	7	FSM	ENSG00000270872.2	ENST00000605551.2	1021	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	46.7169372093486	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCGTCAGCATGCACTGC	143975074	False	NA	NA	False	NA	NA	NA	143975086	144068350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_143975154_144045746_144045810_144054437_144054654_144055292_144055422_144063172_144063395_144067000_144067103_144068128
WTC11_00006547	chr1	+	1489	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	4	junction_2	6.88684045325369	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845408	True	NA	11	True	AATAAA	-22	NA	145845613	145848954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
WTC11_00006548	chr1	+	1397	6	NIC	ENSG00000186364.12	novel	1473	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	11	junction_1	4.24264068711928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTGTCTCAGTTTTT	145845453	False	NA	9	True	AATAAA	-20	NA	145845658	145848952	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_145845833_145846432_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
WTC11_00006550	chr1	+	3849	3	FSM	ENSG00000233396.9	ENST00000667626.1	3851	3	2	0	1	0	multi-exon	FALSE	canonical	1	2	junction_1	1	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTATACTAACTGCTGT	146052332	True	NA	NA	False	ATTAAA	-3	NA	146052626	146061935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_146052949_146058312_146058462_146058557
WTC11_00006551	chr1	+	645	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	20	3	20	-3	multi-exon	FALSE	canonical	2	18	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTTGGTCTCTTTGTTCT	146387149	True	NA	5	True	AATAAA	-15	NA	146387221	146388089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_146387323_146387545
WTC11_00006554	chr1	+	5217	22	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-378	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	28.1700376359025	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	146937860	True	NA	NA	False	ATTAAA	-16	NA	146938365	146996093	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146938983_146943290_146943563_146946554_146946608_146949323_146949423_146951107_146951490_146960108_146960319_146962160_146962264_146969381_146969597_146976928_146977002_146977465_146977672_146978958_146979011_146982927_146983092_146984133_146984186_146984812_146984986_146985704_146985757_146989573_146989747_146990465_146990518_146991112_146991286_146991994_146992047_146992711_146992885_146993598_146993708_146994331
WTC11_00006556	chr1	+	3309	3	FSM	ENSG00000180867.11	ENST00000649713.1	2212	3	-35	-1062	-35	566	multi-exon	FALSE	canonical	1	2	junction_2	13	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGTGTCATGTTGTATA	147172219	True	NA	11	True	AATAAA	-22	NA	147172708	147180188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147173560_147174423_147174586_147177892
WTC11_00006558	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	201.568887799992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	147232535	True	NA	-19	True	NA	NA	NA	147242653	147295730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
WTC11_00006562	chr1	+	5966	10	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	38.6027568899706	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTTTCTTACAAAATT	147597834	True	NA	3	True	AATAAA	-3	NA	147600146	147626198	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147612978_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
WTC11_00006564	chr1	+	3823	8	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	1	-4820	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	27.5858585481173	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGATGAATGTGGCTT	147597884	True	NA	0	True	AATAAA	-9	NA	147600196	147621360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815
WTC11_00006565	chr1	+	7229	6	ISM	ENSG00000116128.12	ENST00000684121.1	5639	8	1579	2852	1579	-2834	internal_fragment	FALSE	canonical	3	36	junction_2	43.301732066974	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCGTGGAATCTCGAGT	147608331	False	NA	4	True	ATTAAA	-15	NA	147608363	147623346	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_147611890_147612882_147612978_147614426_147614617_147615802_147615903_147618815_147621058_147622270
WTC11_00006566	chr1	+	2701	7	FSM	ENSG00000188092.15	ENST00000488603.5	2701	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	87.843452927479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147966770	147993339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147968429_147968894_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
WTC11_00006567	chr1	+	430	1	FSM	ENSG00000273059.1	ENST00000610161.1	430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTCCTTGTTTTTGAGC	NA	False	NA	NA	False	AGTAAA	-17	NA	148011798	148012228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148011800_148012200
WTC11_00006570	chr1	+	1898	1	FSM	ENSG00000280649.2	ENST00000629247.1	1058	1	-107	-733	-107	733	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCCTCCCCTTCCCTCA	NA	False	NA	NA	False	AAAAAG	-21	NA	148458706	148460604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148458700_148460600
WTC11_00006573	chr1	+	326	2	FSM	ENSG00000178104.19	ENST00000534466.1	565	2	239	0	239	0	multi-exon	FALSE	canonical	3	6	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACGCCCATAATCAACAG	NA	False	NA	NA	False	NA	NA	NA	149024447	149026803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149024685_149026714
WTC11_00006575	chr1	+	838	3	FSM	ENSG00000274265.5	ENST00000611769.4	838	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAACTCCATCTCAAAT	149175082	True	NA	NA	False	NA	NA	NA	149176021	149251013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149176251_149190635_149190796_149250564
WTC11_00006576	chr1	+	2754	1	FSM	ENSG00000272755.1	ENST00000610119.1	565	1	-2194	5	-2194	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCTGTTTTGGTGATA	NA	False	NA	NA	False	AATAAA	-16	NA	149262057	149264811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149262100_149264800
WTC11_00006577	chr1	+	1103	5	FSM	ENSG00000286219.2	ENST00000650865.2	8729	5	-7	7633	-7	-758	multi-exon	FALSE	canonical	3	19	junction_1	33.7120156620751	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	149389729	True	NA	NA	False	AATAAA	-16	NA	149390613	149464200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149390923_149430941_149431016_149455317_149455578_149463490_149463827_149464076
WTC11_00006580	chr1	+	276	1	FSM	ENSG00000288867.1	ENST00000585245.3	760	1	157	327	157	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGGCAAGGTGAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	149584004	149584280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149584000_149584300
WTC11_00006582	chr1	+	2306	2	FSM	ENSG00000277147.7	ENST00000651957.1	2306	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTGATTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	149701103	149705716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149702871_149705177
WTC11_00006583	chr1	+	1706	1	FSM	ENSG00000203852.4	ENST00000403683.2	518	1	-96	-1092	-96	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGAGAATTAAGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	149852511	149854217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149852500_149854200
WTC11_00006584	chr1	+	942	2	NIC	ENSG00000178096.9	novel	891	2	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	149899074	True	NA	16	True	ATTAAA	-17	NA	149899574	149900795	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149899731_149900009
WTC11_00006585	chr1	+	741	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	2	0	1	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCTTAATGGACTG	149899105	True	NA	17	True	ATTAAA	-18	NA	149899605	149900796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149899673_149900122
WTC11_00006587	chr1	+	1507	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-329	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	90.4897784282844	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGCTCTTGCTGATGC	150149532	False	NA	9	True	GATAAA	-44	NA	150149586	150159630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
WTC11_00006588	chr1	+	1406	8	FSM	ENSG00000118298.12	ENST00000607652.5	1382	8	-24	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	135.427817960532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCCTTCTCCTGGC	150255414	True	NA	NA	False	NA	NA	NA	150257850	150263831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150258184_150260150_150260249_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150263420_150263658_150263680_150263793
WTC11_00006589	chr1	+	2022	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	-11	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	8.49632273398321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
WTC11_00006591	chr1	+	2515	16	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_13	111.002382356817	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485425	True	NA	15	True	AATAAA	-29	NA	150487381	150507602	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504905_150504979_150505590_150505706_150506915
WTC11_00006592	chr1	+	2554	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	80.2495862528275	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485488	True	NA	15	True	AATAAA	-29	NA	150487444	150507602	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
WTC11_00006593	chr1	+	2692	18	NNC	ENSG00000143374.18	novel	2727	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	87.6059121734993	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485493	True	NA	15	True	AATAAA	-29	NA	150487449	150507602	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_150487517_150487861_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
WTC11_00006594	chr1	+	4230	19	FSM	ENSG00000143382.16	ENST00000271643.9	4212	19	-18	0	-18	0	multi-exon	FALSE	canonical	2	9	junction_5	5.4794791137502	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGAGCTCTTCCTTGTC	150548835	True	NA	4	True	ATTAAA	-19	NA	150549389	150560933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150549500_150549821_150549896_150552204_150552309_150552542_150552601_150552897_150553254_150553425_150554123_150554364_150554468_150555428_150555566_150556161_150556367_150556620_150556794_150556938_150557051_150557149_150557336_150557493_150557624_150557944_150558150_150558472_150558650_150558961_150559166_150559286_150559467_150559760_150559906_150560059
WTC11_00006596	chr1	+	1113	3	FSM	ENSG00000288880.1	ENST00000690011.1	1082	3	-24	-7	-24	7	multi-exon	FALSE	canonical	3	6	junction_2	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGCGGGTCCACTGTA	150629333	True	NA	17	True	AATAAA	-25	NA	150629827	150635733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150629994_150630458_150630503_150634830
WTC11_00006597	chr1	+	3392	1	Genic_Genomic	ENSG00000288880.1	novel	NA	NA	NA	NA	2484	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGCCGGTGCGGGTCC	150631841	False	NA	11	True	AATAAA	-19	NA	150632335	150635727	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_150632300_150635700
WTC11_00006598	chr1	+	3153	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_3	26.3185612575358	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAACACTCAACCACAC	150641563	True	NA	NA	False	AAGAAA	-29	NA	150641682	150651935	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150649045
WTC11_00006599	chr1	+	4817	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTGTGTGTGTGTCT	NA	False	NA	4	True	NA	NA	NA	150654824	150659641	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150654800_150659600
WTC11_00006600	chr1	+	3984	22	FSM	ENSG00000143379.13	ENST00000692314.1	4295	22	-30	341	12	-341	multi-exon	FALSE	canonical	2	9	junction_1	19.1944341894955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTGAACTGTCGTTTC	NA	False	NA	NA	False	NA	NA	NA	150926274	150964384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926349_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
WTC11_00006601	chr1	+	1475	9	ISM	ENSG00000143379.13	ENST00000534805.5	2043	13	7	5467	7	-4	5prime_fragment	FALSE	canonical	3	49	junction_1	11.1460475057305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATCTGCATGGTTTTGAT	150923627	True	NA	NA	False	AATAAA	-18	NA	150926401	150945316	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
WTC11_00006603	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	4.0265391779392	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	150982233	True	NA	7	True	NA	NA	NA	150982291	150995634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
WTC11_00006604	chr1	+	2796	7	NIC	ENSG00000143363.17	novel	2984	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	72.8094926656011	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	151005163	True	NA	11	True	ATTAAA	-14	NA	151008426	151035711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
WTC11_00006605	chr1	+	2500	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	68.7509090848987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005163	True	NA	13	True	ATTAAA	-16	NA	151008426	151035713	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
WTC11_00006607	chr1	+	2970	8	NIC	ENSG00000143363.17	novel	2984	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	60.4523762636207	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	151005148	True	NA	11	True	ATTAAA	-14	NA	151008411	151035711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
WTC11_00006608	chr1	+	2247	10	FSM	ENSG00000163141.20	ENST00000368931.8	2247	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.01438604565527	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCCCCTTCCCCGCGG	151036511	True	NA	NA	False	NA	NA	NA	151036585	151047720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151036767_151037566_151037663_151038503_151038569_151038795_151039027_151042955_151043139_151043331_151043435_151043595_151043728_151045796_151045884_151046066_151046166_151046650
WTC11_00006613	chr1	+	5928	11	NIC	ENSG00000143376.14	novel	6441	12	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	17.4539393834171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	151606762	False	NA	28	True	AATAAA	-20	NA	151612199	151699080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151612382_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
WTC11_00006615	chr1	+	1849	4	FSM	ENSG00000160679.13	ENST00000614256.4	1840	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	46	junction_3	378.352862932064	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	153633914	False	NA	16	True	NA	NA	NA	153633972	153646305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153645063
WTC11_00006616	chr1	+	5517	31	NIC	ENSG00000143624.14	novel	3597	31	NA	NA	-4	0	intron_retention	FALSE	canonical	1	13	junction_8	91.3371349573777	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGAGTGTCTGC	153728032	False	NA	3	True	AATAAA	-16	NA	153728086	153774079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153753700_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761019_153761110_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
WTC11_00006617	chr1	+	3404	25	FSM	ENSG00000143624.14	ENST00000476843.5	3404	25	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	87.2577201296379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGAGTGTCTGC	NA	False	NA	3	True	AATAAA	-16	NA	153751134	153774079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761019_153761110_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
WTC11_00006618	chr1	+	1357	9	FSM	ENSG00000143554.14	ENST00000458027.5	1357	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	59.6676995953422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTCATTATCTCTCT	153776573	False	NA	26	True	AATAAA	-37	NA	153776595	153780157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776728_153777061_153777221_153777760_153777886_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779930
WTC11_00006619	chr1	+	809	1	FSM	ENSG00000236327.2	ENST00000441288.2	271	1	-465	-73	-465	73	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGAGGCCGAGGTGGGA	NA	False	NA	NA	False	AATAAA	-44	NA	153890129	153890938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153890100_153890900
WTC11_00006621	chr1	+	3183	1	FSM	ENSG00000282386.1	ENST00000633140.1	710	1	-608	-1865	-608	1865	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTATTACTACTTTC	153963522	True	NA	9	True	AATAAA	-20	NA	153963752	153966935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153963800_153966900
WTC11_00006622	chr1	+	634	3	FSM	ENSG00000143578.16	ENST00000479010.1	612	3	-22	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACCTGTTTTCTACTCC	153967965	True	NA	NA	False	NA	NA	NA	153968236	153969311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968311_153968521_153968700_153968929
WTC11_00006623	chr1	+	1502	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	-6	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	54.2361093327642	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	153967965	True	NA	17	True	AATAAA	-17	NA	153968236	153974361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
WTC11_00006624	chr1	+	625	2	FSM	ENSG00000177954.14	ENST00000392558.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	24003	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCTTTGAGTTTGATT	153902404	True	NA	NA	False	NA	NA	NA	153990761	153991698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153990803_153991114
WTC11_00006625	chr1	+	376	1	FSM	ENSG00000231416.1	ENST00000431295.1	329	1	-27	-20	-27	20	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGAGGAGACTTAAA	153995548	True	NA	NA	False	AATAAA	-20	NA	153995604	153995980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153995600_153996000
WTC11_00006627	chr1	+	3958	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	48	junction_27	330.029520232608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGCTTCTTGG	154201218	True	NA	21	True	AATAAA	-42	NA	154220966	154271505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270880
WTC11_00006628	chr1	+	3406	25	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	240	junction_1	231.841536968441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	154220093	True	NA	25	True	AATAAA	-22	NA	154221334	154263504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00006629	chr1	+	3906	27	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_26	282.44646557739	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154224967	True	NA	7	True	TATAAA	-14	NA	154225084	154270847	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
WTC11_00006630	chr1	+	1171	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	-20	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	247.433099824758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266770	True	NA	27	True	AATAAA	-16	NA	154272588	154275873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
WTC11_00006632	chr1	+	2843	9	FSM	ENSG00000160712.13	ENST00000344086.8	3217	9	374	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_8	3.9350190596743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCCCTATTAGAGAAG	154405411	True	NA	NA	False	AAAAAG	-19	NA	154405596	154466877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154465133
WTC11_00006633	chr1	+	549	4	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	221.699997494111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGCTCTAGCTGTGT	154974969	True	NA	21	True	AATAAA	-17	NA	154983356	154993110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154983398_154983841_154984067_154992712_154992787_154992901
WTC11_00006635	chr1	+	2860	22	NIC	ENSG00000143537.14	novel	2936	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	28.325689244956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	155049079	True	NA	27	True	AATAAA	-21	NA	155051316	155062775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155062244_155062370_155062459
WTC11_00006638	chr1	+	1430	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	-39	-615	-33	0	multi-exon	FALSE	canonical	3	35	junction_1	61.937244225282	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155085192	True	NA	NA	False	AATAAA	-17	NA	155085482	155087538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
WTC11_00006639	chr1	+	543	4	FSM	ENSG00000169241.19	ENST00000465546.5	538	4	-5	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	118.581430062028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCTCCTGGGTTATGG	155135343	True	NA	NA	False	NA	NA	NA	155135387	155137596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135693_155136298_155136377_155136827_155136952_155137560
WTC11_00006640	chr1	+	1158	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	-22	1	0	0	multi-exon	FALSE	canonical	3	51	junction_3	142.317207322235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132134	True	NA	5	True	AATAAA	-17	NA	155135827	155138851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
WTC11_00006641	chr1	+	3122	11	ISM	ENSG00000163462.19	ENST00000468878.1	3318	12	432	-19	432	0	3prime_fragment	FALSE	canonical	0	0	junction_8	10.09405765785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAATCATTCCTGTGAGT	155174875	False	NA	27	True	AATAAA	-34	NA	155175185	155184970	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_155175273_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155178808_155178847_155179631_155179935_155181851_155182150_155183796
WTC11_00006642	chr1	+	825	3	FSM	ENSG00000231064.8	ENST00000422665.1	473	3	-174	-178	-174	-4	multi-exon	FALSE	canonical	3	13	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTTAGAGGCCAGGCA	155200050	False	NA	4	True	AATAAA	-11	NA	155200063	155205484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155200312_155200699_155200827_155205034
WTC11_00006643	chr1	+	1441	7	FSM	ENSG00000173171.15	ENST00000316721.8	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	291.114334163668	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155208720	True	NA	NA	False	AATAAA	-15	NA	155208796	155213823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212384_155212568_155212693_155212771_155213236_155213392_155213483
WTC11_00006648	chr1	+	680	4	FSM	ENSG00000160752.15	ENST00000490140.1	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	2327	junction_2	142.592659932644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155318638	True	NA	27	True	AATAAA	-16	NA	155318718	155320665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155318929_155319610_155319689_155319793_155319929_155320408
WTC11_00006649	chr1	+	3417	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	19	0	17	0	multi-exon	FALSE	canonical	3	16	junction_1	103.675776662954	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155320588	True	NA	29	True	AATAAA	-15	NA	155320912	155331114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
WTC11_00006650	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	41.5535062004522	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322421	True	NA	29	True	AATAAA	-15	NA	155324576	155331114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
WTC11_00006651	chr1	+	1305	12	FSM	ENSG00000132676.16	ENST00000471214.5	1287	12	-18	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	225.979008752349	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTAAGTGCATATGATA	155687713	True	NA	24	True	NA	NA	NA	155687966	155731411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155688193_155689094_155689175_155709032_155709126_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355
WTC11_00006652	chr1	+	1671	13	FSM	ENSG00000132676.16	ENST00000471642.6	1671	13	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_3	182.843493336666	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155687713	True	NA	-12	True	AATAAA	-11	NA	155687966	155738526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155688193_155689094_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
WTC11_00006653	chr1	+	536	4	FSM	ENSG00000132676.16	ENST00000465375.5	729	4	-11	204	0	-91	multi-exon	FALSE	canonical	3	451	junction_3	24.0970260959038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAAACAATATTGATGT	155678074	True	NA	NA	False	NA	NA	NA	155689082	155721785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516
WTC11_00006655	chr1	+	1619	2	FSM	ENSG00000116586.12	ENST00000489664.1	868	2	-66	-685	-27	685	multi-exon	FALSE	canonical	3	1584	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTTACTTTTGTTTTT	156044109	True	NA	NA	False	AATAAA	-18	NA	156054754	156056678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156054958_156055262
WTC11_00006657	chr1	+	3218	12	FSM	ENSG00000160789.24	ENST00000675881.1	3218	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	67.0593668154267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	156111601	True	NA	23	True	AATACA	-14	NA	156114710	156140081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135860_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
WTC11_00006658	chr1	+	2647	12	ISM	ENSG00000160789.24	ENST00000448611.6	1943	13	31	-68	2	0	intron_retention	FALSE	canonical	2	7	junction_1	65.7211741166629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	156125933	True	NA	23	True	AATACA	-14	NA	156126190	156140081	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
WTC11_00006660	chr1	+	3242	15	FSM	ENSG00000196189.14	ENST00000368285.8	3242	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.8158065668605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGATGGGTGCTGTGTT	156153221	False	NA	12	True	ATTAAA	-14	NA	156153584	156177744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156153765_156154549_156154718_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
WTC11_00006662	chr1	+	1378	1	ISM	ENSG00000163382.13	ENST00000681645.1	6541	5	2721	3529	1212	123	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTCAAAGCGAGGGTA	156594462	False	NA	NA	False	NA	NA	NA	156594486	156595864	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_156594500_156595900
WTC11_00006663	chr1	+	751	3	FSM	ENSG00000132702.13	ENST00000494218.1	1022	3	271	0	271	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGCTGGCCCGGCGGC	NA	False	NA	NA	False	GGGGCT	-12	NA	156624334	156625535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156624468_156624600_156624784_156625100
WTC11_00006664	chr1	+	1119	5	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14781	1	169	-1	3prime_fragment	FALSE	canonical	3	14	junction_1	6.06217782649107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGATGCTTCTGTGTGT	156656799	True	NA	6	True	AATAAA	-21	NA	156656897	156659527	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
WTC11_00006665	chr1	+	1775	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	27	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	19.310331143947	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156727253	True	NA	25	True	ATTAAA	-14	NA	156728468	156736949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
WTC11_00006666	chr1	+	1163	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	165	0	intron_retention	FALSE	canonical	3	16	junction_6	17.9022287975092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156728970	False	NA	25	True	ATTAAA	-14	NA	156729124	156736949	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
WTC11_00006668	chr1	+	381	3	FSM	ENSG00000198400.13	ENST00000533630.1	645	3	0	264	0	-264	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCCAGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	156860912	156864799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156861147_156864353_156864429_156864727
WTC11_00006670	chr1	+	813	3	FSM	ENSG00000187800.14	ENST00000465101.1	980	3	167	0	167	0	multi-exon	FALSE	canonical	0	0	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTTAGAAGGGTAC	NA	False	NA	NA	False	NA	NA	NA	156913698	156915148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156913761_156913851_156914101_156914646
WTC11_00006671	chr1	+	2359	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	9	1239	9	-1239	multi-exon	FALSE	canonical	2	7	junction_1	13.6585341656986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTCTGATGCCAAAGAA	158177873	True	NA	NA	False	NA	NA	NA	158178038	158185188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
WTC11_00006672	chr1	+	2086	6	NNC	ENSG00000158473.8	novel	3492	6	NA	NA	0	-1530	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	16.5891530826622	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTATTATGTTGAA	158180862	True	NA	NA	False	AATAAA	-17	NA	158180894	158184897	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_158181163_158181454_158181722_158182031_158182435_158182877_158183157_158183935_158184036_158184128
WTC11_00006673	chr1	+	834	3	FSM	ENSG00000163565.20	ENST00000566111.5	856	3	22	0	22	0	multi-exon	FALSE	canonical	2	3	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGTTAAAAGGTAA	158999878	True	NA	NA	False	NA	NA	NA	158999989	159014929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_159000396_159010002_159010162_159014660
WTC11_00006674	chr1	+	758	5	FSM	ENSG00000163565.20	ENST00000426592.6	761	5	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_3	3.16227766016838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAGACCTCATTGTCA	159005924	True	NA	NA	False	NA	NA	NA	159005964	159016653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_159006042_159010002_159010162_159014660_159014946_159015871_159015988_159016532
WTC11_00006675	chr1	+	1097	1	FSM	ENSG00000213080.3	ENST00000425270.1	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATCAGTAGCCCCTAA	NA	False	NA	NA	False	AAGAAA	-10	NA	160894979	160896076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160895000_160896100
WTC11_00006676	chr1	+	1333	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.5843639350783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097851	True	NA	16	True	ATTAAA	-19	NA	161098393	161100346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
WTC11_00006677	chr1	+	801	6	FSM	ENSG00000158793.14	ENST00000496768.5	790	6	-11	0	-11	0	multi-exon	FALSE	canonical	2	8	junction_1	84.4596945294026	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGATGCCTTTTTAA	161115380	True	NA	NA	False	NA	NA	NA	161118074	161120232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161118179_161118803_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106
WTC11_00006681	chr1	+	2174	13	NNC	ENSG00000143258.16	novel	2315	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	15	junction_10	62.3616245957578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156574	True	NA	NA	False	AATAAA	-16	NA	161159499	161165723	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164606_161164827_161164943_161165028_161165144_161165356
WTC11_00006684	chr1	+	1664	13	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-3	-10	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	106.394183216105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGAGCTTGGCTTGG	161164275	True	NA	5	True	AATAAA	-2	NA	161166494	161171204	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167354_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00006687	chr1	+	1630	15	NNC	ENSG00000158864.13	novel	2042	15	NA	NA	0	47737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	366.09163707287	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCTACCTCTGGAAAC	161187279	True	NA	NA	False	AAAAAG	-4	NA	161202375	161262460	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155_161214395_161262433
WTC11_00006688	chr1	+	848	9	FSM	ENSG00000158882.15	ENST00000470426.5	845	9	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	23.4134042804544	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCCCAGGCCAACATG	161225436	True	NA	NA	False	NA	NA	NA	161226059	161228787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161226137_161226475_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714
WTC11_00006689	chr1	+	1414	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_1	1	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	161258718	False	NA	NA	False	AATAAA	-32	NA	161258736	161285450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161258984_161283667_161283723_161284338
WTC11_00006692	chr1	+	783	3	FSM	ENSG00000143226.15	ENST00000461298.1	805	3	22	0	22	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGCCTCAGATTTTTCCT	NA	False	NA	34	True	ACTAAA	-10	NA	161513398	161518590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161513528_161513894_161513933_161517974
WTC11_00006693	chr1	+	3095	17	FSM	ENSG00000118217.7	ENST00000681001.1	3084	17	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.4694988757327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	161764373	True	NA	NA	False	NA	NA	NA	161766308	161959658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161766443_161778243_161778321_161778669_161778696_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
WTC11_00006694	chr1	+	627	2	FSM	ENSG00000117143.13	ENST00000474728.1	660	2	0	33	0	-33	multi-exon	FALSE	canonical	3	262	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCCCACAAAGTTCT	162581410	False	NA	NA	False	NA	NA	NA	162581430	162588072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_162581460_162587474
WTC11_00006695	chr1	+	1709	14	NIC	ENSG00000143228.13	novel	1842	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	62.902197024687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	163317411	True	NA	33	True	AGTAAA	-45	NA	163322019	163355759	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_163322067_163326074_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
WTC11_00006696	chr1	+	6060	6	FSM	ENSG00000185630.19	ENST00000612123.3	6062	6	2	0	2	0	multi-exon	FALSE	canonical	3	66	junction_4	32.4616697044376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	164792493	164851821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
WTC11_00006697	chr1	+	1341	2	FSM	ENSG00000162763.4	ENST00000294818.2	1372	2	31	0	31	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACAGGTTGGTCCCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	165544030	165563957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165544919_165563504
WTC11_00006699	chr1	+	694	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	-14	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610099	True	NA	35	True	AATAAA	-32	NA	165631225	165655620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
WTC11_00006701	chr1	+	5997	5	ISM	ENSG00000143157.12	ENST00000367876.9	5751	6	26	1889	26	-3	intron_retention	FALSE	canonical	3	149	junction_1	18.7683243791235	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGCTATGGTGATTTTAT	166836660	True	NA	15	True	AATAAA	-18	NA	166839500	166854470	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937
WTC11_00006702	chr1	+	4000	6	NIC	ENSG00000143157.12	novel	5751	6	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	55.6467429415235	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTATGGTGATTTTATT	166836662	True	NA	16	True	AATAAA	-19	NA	166839502	166854471	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_166839770_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
WTC11_00006705	chr1	+	508	2	FSM	ENSG00000143190.23	ENST00000490100.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAATTCAGACACTTCC	167383459	False	NA	NA	False	NA	NA	NA	167383473	167389617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167383952_167389587
WTC11_00006708	chr1	+	618	1	FSM	ENSG00000227777.1	ENST00000449688.1	618	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTATTGAAAACATTG	NA	False	NA	NA	False	NA	NA	NA	168542736	168543354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168542700_168543400
WTC11_00006709	chr1	+	3330	1	FSM	ENSG00000213062.5	ENST00000392097.5	14107	1	140	10637	140	-10637	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTTTGCCCCTCTTTG	169486004	False	NA	NA	False	NA	NA	NA	169486215	169489545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169486200_169489500
WTC11_00006711	chr1	+	2303	10	FSM	ENSG00000076258.10	ENST00000367749.4	2303	10	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_4	6.08783445857899	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCCCCACCCAAATC	171314057	True	NA	5	True	AATAAA	-19	NA	171314182	171342084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708_171332909_171334410_171334764_171337355_171337426_171341412
WTC11_00006714	chr1	+	10512	35	NIC	ENSG00000117523.18	novel	10624	35	NA	NA	-76	-4	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	56.6604650924988	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTTGGAGCTTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	171485453	171593507	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
WTC11_00006715	chr1	+	6602	19	ISM	ENSG00000117523.18	ENST00000367742.7	10366	34	-7	35046	-7	25673	5prime_fragment	FALSE	canonical	3	24	junction_5	17.6209226086561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTCTTCTGGTGTCATT	171470362	True	NA	13	True	ATTAAA	-20	NA	171485543	171558465	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239
WTC11_00006716	chr1	+	3735	4	ISM	ENSG00000117523.18	ENST00000498596.5	1066	5	-999	-1284	-999	-4	intron_retention	FALSE	canonical	3	133	junction_3	33.8263539599263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTTGGAGCTTATAA	171586020	False	NA	NA	False	AATAAA	-15	NA	171586073	171593507	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_171587222_171587647_171587752_171588378_171588506_171591151
WTC11_00006717	chr1	+	1066	5	FSM	ENSG00000117523.18	ENST00000498596.5	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	80.5698454758354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGATGGTCCCAGCTA	171586975	True	NA	NA	False	AATATA	-38	NA	171587072	171592223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171587222_171587647_171587752_171588378_171588506_171591151_171591201_171591586
WTC11_00006719	chr1	+	5785	23	NIC	ENSG00000094975.14	novel	5625	24	NA	NA	-241	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	35.7449643913495	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	NA	False	NA	28	True	AATAAA	-21	NA	172532876	172611831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
WTC11_00006720	chr1	+	5491	22	ISM	ENSG00000094975.14	ENST00000608151.5	5790	23	679	-2	2	0	3prime_fragment	FALSE	canonical	3	43	junction_2	44.2680968542016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	172529925	True	NA	30	True	AATAAA	-23	NA	172533151	172611833	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
WTC11_00006723	chr1	+	324	2	NNC	ENSG00000289426.1	novel	624	3	NA	NA	92	-37916	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCGAGCCCACCTGGGA	173637402	False	NA	NA	False	NA	NA	NA	173637804	173640348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_173638035_173640254
WTC11_00006724	chr1	+	3361	15	FSM	ENSG00000117593.12	ENST00000648271.1	3361	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	86.8705640476634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGACTTGATTTCATG	173819854	True	NA	-6	True	GATAAA	-9	NA	173824683	173857873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665
WTC11_00006725	chr1	+	2886	21	FSM	ENSG00000152061.24	ENST00000251507.8	2899	21	13	0	10	0	multi-exon	FALSE	canonical	1	3	junction_17	27.4497723123526	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174158221	True	NA	14	True	AATAAA	-20	NA	174159529	174958182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994_174394146_174637374_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174957890
WTC11_00006727	chr1	+	4270	8	NIC	ENSG00000152061.24	novel	710	7	NA	NA	-52	-526	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	54.0804389548663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTATGGATGTGGGG	174870630	True	NA	NA	False	AGTAAA	-12	NA	174874405	174993354	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
WTC11_00006728	chr1	+	6714	10	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	71.7495644586084	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTATGTCTTTTT	174870630	True	NA	12	True	AATAAA	-12	NA	174874405	174995301	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890_174958174_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
WTC11_00006729	chr1	+	6492	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	62.1579389539261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTCCATGTATGT	174874771	False	NA	6	True	AATAAA	-6	NA	174875545	174995295	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174875714_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
WTC11_00006731	chr1	+	578	1	FSM	ENSG00000273384.1	ENST00000608190.1	577	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGCACACACACACCC	NA	False	NA	NA	False	CATAAA	-27	NA	178651706	178652284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178651700_178652300
WTC11_00006733	chr1	+	1084	1	FSM	ENSG00000231905.2	ENST00000424368.1	814	1	-185	-85	-185	85	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATGATGATGATGA	NA	False	NA	NA	False	NA	NA	NA	179183548	179184632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179183500_179184600
WTC11_00006735	chr1	+	2724	6	FSM	ENSG00000135837.16	ENST00000417046.1	2724	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	19.3948446758411	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAATACA	180093692	False	NA	NA	False	AAGAAA	-36	NA	180093713	180113380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180094617_180095522_180095931_180096037_180096185_180098862_180098986_180110996_180111196_180112436
WTC11_00006738	chr1	+	1361	1	FSM	ENSG00000261504.1	ENST00000566297.1	1376	1	-83	98	-83	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAACACACACGACCCA	182615127	False	NA	-84	True	NA	NA	NA	182615170	182616531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182615200_182616500
WTC11_00006739	chr1	+	2714	11	FSM	ENSG00000135838.14	ENST00000367554.7	3027	11	313	0	-7	0	multi-exon	FALSE	canonical	1	3	junction_1	16.1740532953246	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	182789051	True	NA	NA	False	AATAAA	-19	NA	182789761	182830384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182789806_182803697_182803772_182806144_182806532_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
WTC11_00006741	chr1	+	4443	28	NIC	ENSG00000135829.17	novel	2531	9	NA	NA	-94	-1	intron_retention	FALSE	canonical	3	68	junction_1	188.870391251138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTTGCCGTGTAGTTT	182825757	False	NA	11	True	AATAAA	-11	NA	182839639	182887746	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
WTC11_00006743	chr1	+	6100	23	FSM	ENSG00000116698.22	ENST00000688051.1	5946	23	-155	1	128	0	multi-exon	FALSE	canonical	3	90	junction_18	60.279874113509	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	183472309	False	NA	11	True	ATTAAA	-18	NA	183472343	183554190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00006744	chr1	+	5750	22	NNC	ENSG00000116698.22	novel	5788	22	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	68.7149292119161	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCAGATCTGTGTATC	183466186	False	NA	4	True	ATTAAA	-11	NA	183472532	183554183	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_183472650_183512840_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
WTC11_00006749	chr1	+	4166	19	NIC	ENSG00000116668.13	novel	633	5	NA	NA	0	331	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	9.486182283774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAATCCTTTCCTTAAA	185157365	True	NA	NA	False	NA	NA	NA	185157481	185292112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_185157627_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
WTC11_00006750	chr1	+	8575	48	NIC	ENSG00000143341.12	novel	18368	107	NA	NA	-66598	4	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	6.74451305248012	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAACCTAAAATTCGT	NA	False	NA	45	True	AATAAA	-27	NA	186087227	186190953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_186087331_186087442_186087646_186087931_186088014_186088144_186088277_186088605_186088756_186090757_186090918_186093133_186093259_186093485_186093670_186094275_186094374_186095242_186095522_186103471_186103669_186106883_186106966_186108460_186108598_186112811_186112954_186113978_186114124_186114818_186114947_186115257_186115415_186116993_186117116_186117458_186117624_186119190_186119299_186119744_186119883_186120010_186120146_186122950_186123221_186125603_186125795_186128077_186128292_186129965_186130101_186130506_186130698_186132327_186132410_186136667_186136938_186137497_186137669_186137801_186137973_186144172_186144344_186144532_186144704_186145402_186145574_186145752_186145924_186151199_186151350_186151605_186151744_186152749_186152872_186153749_186153988_186165110_186165174_186166183_186166304_186166807_186166943_186171336_186171451_186172005_186172132_186174513_186174643_186182167_186182288_186187882_186188010_186189511
WTC11_00006751	chr1	+	1900	13	FSM	ENSG00000157181.16	ENST00000419367.8	1900	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	53.8413306753175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGCTGG	186374206	True	NA	NA	False	NA	NA	NA	186375837	186419551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
WTC11_00006752	chr1	+	3813	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	7	0	-7	multi-exon	FALSE	non_canonical	0	0	junction_11	41.5777591889173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAATAATGTGGAATTT	186374206	True	NA	NA	False	AATAAA	-13	NA	186375837	186421368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
WTC11_00006753	chr1	+	1741	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	49.486547337099	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGCTGCCTTGTTTAGC	186374220	True	NA	1	True	ATTAAA	-8	NA	186375851	186419228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399044_186406082_186406269_186411810_186411894_186417543_186417655_186419008
WTC11_00006754	chr1	+	1665	14	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	50.9608272809593	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTTGTTTAGCCT	186374220	True	NA	3	True	ATTAAA	-10	NA	186375851	186419230	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389582_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399044_186406082_186406269_186417543_186417655_186419008
WTC11_00006755	chr1	+	1065	3	ISM	ENSG00000157181.16	ENST00000419367.8	1900	13	29699	321	7117	-3	3prime_fragment	FALSE	canonical	3	136	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTTGTTTAGCCT	186405525	False	NA	3	True	ATTAAA	-10	NA	186405536	186419230	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_186406269_186417543_186417655_186419008
WTC11_00006756	chr1	+	2865	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	14	0	14	0	multi-exon	FALSE	canonical	2	4	junction_4	3.59642267473712	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	186828863	True	NA	NA	False	AATAAA	-20	NA	186828962	186988981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
WTC11_00006757	chr1	+	261	1	FSM	ENSG00000225462.1	ENST00000424976.1	1071	1	570	240	570	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAACAGGCCACTCCGT	NA	False	NA	NA	False	NA	NA	NA	187563630	187563891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_187563600_187563900
WTC11_00006758	chr1	+	536	1	FSM	ENSG00000230426.5	ENST00000614505.1	2234	1	56	1642	56	-722	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTCTGTGTGGGTA	187641481	False	NA	NA	False	NA	NA	NA	187641671	187642207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_187641700_187642200
WTC11_00006759	chr1	+	1463	3	NNC	ENSG00000237457.6	novel	526	2	NA	NA	-286	744	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	6.5	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCACATTTTATTTTGTA	190478135	True	NA	NA	False	TTTAAA	-21	NA	190478264	190481479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_190478493_190479040_190479141_190480344
WTC11_00006760	chr1	+	7862	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	-14	0	-14	0	multi-exon	FALSE	canonical	2	5	junction_1	27.452370627347	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193059422	False	NA	NA	False	NA	NA	NA	193059439	193091219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
WTC11_00006761	chr1	+	1485	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.2925266193419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	193052198	True	NA	-24	True	NA	NA	NA	193059611	193085235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
WTC11_00006763	chr1	+	250	2	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGCTGAAGACTGACG	198035041	False	NA	NA	False	NA	NA	NA	198035051	198037243	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_198035205_198037146
WTC11_00006764	chr1	+	3156	2	NNC	ENSG00000151414.15	novel	1036	10	NA	NA	37379	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTGGGTATCTATGAT	198315030	True	NA	NA	False	AATAAA	-15	NA	198315082	198322418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_198315232_198319411
WTC11_00006769	chr1	+	1733	1	FSM	ENSG00000170128.5	ENST00000304244.5	1198	1	124	-659	124	659	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACCGTCTTTGCTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	200873104	200874837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200873100_200874800
WTC11_00006770	chr1	+	1758	3	NNC	ENSG00000282221.1	novel	556	2	NA	NA	-240	10349	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAAGCGCCCGGGGCTC	201399034	True	NA	NA	False	NA	NA	NA	201399392	201411539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_201399791_201400792_201401996_201411382
WTC11_00006772	chr1	+	12204	27	NNC	ENSG00000134369.16	novel	2968	14	NA	NA	-156	0	intron_retention	TRUE	canonical	2	7	junction_11	28.6118949485066	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	NA	False	NA	16	True	AATAAA	-19	NA	201739160	201826969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_201739845_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790851_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
WTC11_00006773	chr1	+	1503	5	FSM	ENSG00000198892.7	ENST00000464117.1	914	5	-51	-538	-51	88	multi-exon	FALSE	canonical	2	6	junction_1	42.0319818709516	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAAGGTTCCCAAGCC	201888618	False	NA	NA	False	NA	NA	NA	201888628	201892675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201888782_201889444_201889617_201890453_201890588_201891400_201891569_201891799
WTC11_00006775	chr1	+	2093	10	FSM	ENSG00000176393.11	ENST00000471105.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	225.36094505383	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	201982925	False	NA	16	True	AATAAA	-24	NA	201982954	202006147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201983114_201988903_201989045_201996146_201996410_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
WTC11_00006776	chr1	+	1735	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	2	71	2	-71	multi-exon	FALSE	canonical	2	9	junction_8	4.80740170061865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCAAGTAGCTATTTG	202347172	True	NA	NA	False	TTTAAA	-22	NA	202348721	202438171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
WTC11_00006778	chr1	+	15408	25	FSM	ENSG00000077157.22	ENST00000391959.5	15431	25	23	0	2	0	multi-exon	TRUE	canonical	2	2	junction_12	6.33059151176957	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCCCCTTCTCAATAT	202347172	True	NA	8	True	AATAAA	-24	NA	202348721	202592706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202445045_202445229_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
WTC11_00006781	chr1	+	1224	1	FSM	ENSG00000230280.2	ENST00000430583.2	918	1	-229	-77	-229	77	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCCAAGCACAGTGGT	NA	False	NA	NA	False	NA	NA	NA	202911582	202912806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202911600_202912800
WTC11_00006783	chr1	+	6891	27	NIC	ENSG00000143847.16	novel	6508	30	NA	NA	3	0	intron_retention	TRUE	canonical	1	6	junction_3	7.16252575199063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGCCTCCAGTCTTT	203025633	True	NA	11	True	AATAAA	-23	NA	203026493	203078735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203026630_203038609_203039243_203043396_203043499_203043930_203044096_203044378_203044454_203044695_203044786_203045367_203045560_203045840_203045988_203046247_203046383_203048226_203048311_203048582_203048715_203048917_203048981_203051768_203051878_203053752_203053962_203055431_203055673_203056119_203056156_203056451_203056509_203056783_203056951_203059177_203059272_203059769_203059852_203060216_203060418_203060969_203061033_203063827_203064004_203067694_203067793_203068452_203068629_203071691_203071761_203075576
WTC11_00006786	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	203304640	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203305749_203307103
WTC11_00006790	chr1	+	5807	18	NIC	ENSG00000058673.17	novel	5917	18	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_15	125.830913074336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787352	True	NA	8	True	AATAAA	-18	NA	203795713	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00006792	chr1	+	4665	3	NNC	ENSG00000198625.14	novel	9098	3	NA	NA	-2026	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	NA	False	NA	10	True	ATTAAA	-17	NA	204514352	204558119	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_204514384_204552890_204555206_204555800
WTC11_00006793	chr1	+	9986	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	22	0	-5	0	multi-exon	FALSE	canonical	1	2	junction_5	9.52190457139047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	204513014	True	NA	10	True	ATTAAA	-17	NA	204516400	204558119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
WTC11_00006795	chr1	+	9810	25	NIC	ENSG00000163531.17	novel	10336	30	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	14.3594118380014	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCCATGTGATTTGCT	204827569	True	NA	14	True	AATAAA	-17	NA	204828637	205022822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670_204976796_204977680_204977726_204978967_204979070_204979361_204979560_204980369_204980441_204981797_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
WTC11_00006798	chr1	+	3756	14	FSM	ENSG00000117266.16	ENST00000515494.5	3756	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	20.4247790106316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGCGAGCAGTCTC	NA	False	NA	11	True	AATATA	-15	NA	205522428	205532785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
WTC11_00006799	chr1	+	4020	10	ISM	ENSG00000266028.8	ENST00000573034.8	6884	23	-9	55859	-9	546	5prime_fragment	FALSE	canonical	3	102	junction_3	70.7279608390094	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGATATAACACTATTTA	206199384	True	NA	NA	False	NA	NA	NA	206203531	206408577	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376
WTC11_00006800	chr1	+	6844	23	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	60.0928517083878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	206199430	True	NA	10	True	AATAAA	-20	NA	206203577	206464436	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401423_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
WTC11_00006802	chr1	+	2243	11	FSM	ENSG00000196352.17	ENST00000314754.12	2220	11	-23	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	33.4089808285138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTAGTATGTGAAATT	207320037	True	NA	4	True	AATAAA	-18	NA	207321677	207360501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390_207340509_207359545
WTC11_00006803	chr1	+	4139	20	FSM	ENSG00000117322.18	ENST00000367057.8	4139	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	6.72161107188314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGCCTTATTTTGT	207453769	True	NA	NA	False	AATAAA	-23	NA	207454327	207489892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473544_207473722_207473800_207473886_207474240_207474324_207474823_207475217_207476233_207476420_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
WTC11_00006805	chr1	+	6911	5	NNC	ENSG00000244703.3	novel	763	5	NA	NA	-98	34122	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	27.7522521608607	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTTATTTGTTTTCT	207643666	True	NA	NA	False	AATAAA	-31	NA	207645135	207691532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_207645331_207677388_207677569_207678197_207678298_207683871_207683958_207685182
WTC11_00006806	chr1	+	661	2	FSM	ENSG00000117335.20	ENST00000496723.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTAACTCTTTATCCT	207767183	False	NA	NA	False	NA	NA	NA	207767204	207770362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207767824_207770320
WTC11_00006807	chr1	+	720	1	FSM	ENSG00000224540.1	ENST00000429208.1	1224	1	477	27	477	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAACGAGAACAACAAGGA	209232652	False	NA	NA	False	NA	NA	NA	209232672	209233392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209232700_209233400
WTC11_00006808	chr1	+	1203	5	NNC	ENSG00000230937.13	novel	1072	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_3	55.0931030166209	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTCTCTGCCTCTAT	209418098	True	NA	16	True	ACTAAA	-17	NA	209428816	209432545	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_209429409_209430424_209430477_209431742_209431826_209431946_209432081_209432203
WTC11_00006809	chr1	+	929	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	-3	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	45.536310297998	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418098	True	NA	20	True	ACTAAA	-21	NA	209428816	209432549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
WTC11_00006810	chr1	+	922	4	FSM	ENSG00000230937.13	ENST00000667171.1	916	4	-6	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.0049017841116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418098	True	NA	20	True	ACTAAA	-21	NA	209428816	209432549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209432203
WTC11_00006811	chr1	+	1324	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	-1	-251	0	0	multi-exon	FALSE	canonical	3	81	junction_2	25.4209012865835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATTGTAATAAAGT	209418098	True	NA	1	True	ATTAAA	-14	NA	209428816	209432800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
WTC11_00006812	chr1	+	855	4	FSM	ENSG00000230937.13	ENST00000458250.6	849	4	-6	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	46.9964537669244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATTGTAATAAAGT	209418098	True	NA	1	True	ATTAAA	-14	NA	209428816	209432800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432672
WTC11_00006813	chr1	+	801	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	-2	10	0	-10	multi-exon	FALSE	canonical	3	28	junction_4	50.4894791020862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	209418098	True	NA	10	True	AATAAA	-21	NA	209428816	209432838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
WTC11_00006814	chr1	+	1137	6	NNC	ENSG00000230937.13	novel	1007	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	61.7770183806244	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418100	True	NA	20	True	ACTAAA	-21	NA	209428818	209432549	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209431946_209432081_209432203
WTC11_00006815	chr1	+	704	4	FSM	ENSG00000230937.13	ENST00000366437.7	704	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.8872107200038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418292	False	NA	20	True	ACTAAA	-21	NA	209429010	209432549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209432203
WTC11_00006819	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	209675334	True	NA	10	True	AATAAA	-19	NA	209675411	209676390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209675550_209675652
WTC11_00006822	chr1	+	2062	1	ISM	ENSG00000143469.20	ENST00000637265.1	13567	10	231061	81	148201	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAATCTCTGATTGTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	210169246	210171308	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_210169200_210171300
WTC11_00006823	chr1	+	719	4	FSM	ENSG00000082497.12	ENST00000482421.1	494	4	1	-226	1	223	multi-exon	FALSE	canonical	2	2	junction_3	17.2111075245674	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCATTTCTATGACT	210237916	False	NA	NA	False	NA	NA	NA	210237943	210246854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_210238136_210239492_210239609_210245799_210245928_210246571
WTC11_00006826	chr1	+	10292	11	NNC	ENSG00000117625.14	novel	1827	11	NA	NA	-748	-364	intron_retention	FALSE	canonical	2	2	junction_10	23.9175667658732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCTATTTTTATATAA	NA	False	NA	12	True	ATTAAA	-17	NA	211257628	211316021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211308736
WTC11_00006827	chr1	+	3980	11	FSM	ENSG00000082512.15	ENST00000336184.6	3972	11	-8	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_1	28.6740300620614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACGAGTTGTGATTTT	NA	False	NA	14	True	AGTAAA	-16	NA	211326606	211374940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211326674_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
WTC11_00006828	chr1	+	3538	9	NIC	ENSG00000082512.15	novel	3976	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_1	27.4214788076792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGGTTTTGTGTTT	211325466	True	NA	15	True	TTTAAA	-12	NA	211326832	211374785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_211326890_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
WTC11_00006829	chr1	+	803	1	ISM	ENSG00000153363.14	ENST00000661331.1	1811	6	50031	84	-433	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATACCCAGGAATCAAACC	NA	False	NA	NA	False	AAAAAG	-32	NA	211432792	211433595	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_211432800_211433600
WTC11_00006830	chr1	+	533	1	FSM	ENSG00000238137.2	ENST00000457786.1	533	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGCCCAGGCAGCCACC	NA	False	NA	NA	False	NA	NA	NA	211442273	211442806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211442300_211442800
WTC11_00006831	chr1	+	931	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	-81	-5	-78	-2	multi-exon	FALSE	canonical	3	48	junction_1	272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTCTTCCCCAGAGGC	212428025	True	NA	8	True	AATAAA	-20	NA	212432841	212446377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212433121_212444338_212444443_212445829
WTC11_00006833	chr1	+	967	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAGTCAAACGGTCTG	212909990	False	NA	NA	False	NA	NA	NA	212910008	212910975	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212910000_212911000
WTC11_00006834	chr1	+	1771	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	-159	2809	intron_retention	FALSE	canonical	3	25	junction_3	15.5134350376268	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTTCTCATGTT	212916616	False	NA	10	True	AATAAA	-17	NA	212916627	212920386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
WTC11_00006835	chr1	+	3602	2	NIC	ENSG00000282718.1	novel	554	3	NA	NA	-159	2811	intron_retention	FALSE	canonical	3	51	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCTTTCTCATGTTTA	212916616	False	NA	12	True	AATAAA	-19	NA	212916627	212920388	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212917201_212917359
WTC11_00006836	chr1	+	672	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	-2	467	at_least_one_novel_splicesite	FALSE	canonical	3	273	junction_2	96.2923788376953	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCAGTCAGACTTCTCA	212922160	True	NA	14	True	AATGAA	-8	NA	212950615	212952279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952128
WTC11_00006837	chr1	+	553	4	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-2	460	at_least_one_novel_splicesite	FALSE	canonical	3	373	junction_3	555.950237581266	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAATCAACCAGTCAGA	212922160	True	NA	7	True	AATGAA	-1	NA	212950615	212952272	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952128
WTC11_00006838	chr1	+	4389	8	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	308	junction_4	437.324565409038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922179	True	NA	17	True	AATAAA	-19	NA	212950634	212991585	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951181_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212972579_212972962_212973954_212974071_212988511
WTC11_00006840	chr1	+	745	2	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGAAATCCTGTAAGA	216147811	False	NA	36	True	NA	NA	NA	216147833	216152680	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_216148095_216152196
WTC11_00006841	chr1	+	4601	2	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGAAATCCTGTAAGA	216147811	False	NA	36	True	NA	NA	NA	216147833	216152680	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_216152355_216152600
WTC11_00006842	chr1	+	1711	4	FSM	ENSG00000143353.12	ENST00000460522.5	1703	4	-11	3	-11	-3	multi-exon	FALSE	canonical	3	18	junction_2	161.099003376461	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTCTGCATCGACCTA	219172482	True	NA	10	True	AATAAA	-22	NA	219173857	219212862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_219173982_219179146_219179247_219210531_219210648_219211491
WTC11_00006844	chr1	+	5838	19	NIC	ENSG00000116141.17	novel	4687	19	NA	NA	-50	327	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	22.4370862525902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGAGATTTTGGTC	NA	False	NA	NA	False	TATAAA	-12	NA	220528085	220664788	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_220528874_220576645_220576737_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220657789_220657835_220661811
WTC11_00006845	chr1	+	5093	2	FSM	ENSG00000116141.17	ENST00000678857.1	5093	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTATGTTCACCGGCTA	NA	False	NA	NA	False	AATAAA	-4	NA	220655288	220664358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220657835_220661811
WTC11_00006846	chr1	+	252	2	FSM	ENSG00000117791.16	ENST00000496078.1	252	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGAAGGGAAGAACATCA	220755715	False	NA	NA	False	NA	NA	NA	220756277	220761764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220756423_220761657
WTC11_00006847	chr1	+	1760	6	FSM	ENSG00000186205.13	ENST00000407981.6	1760	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	56.4815013964749	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTTTCAGATCTTACTAA	220791460	True	NA	20	True	AATAAA	-16	NA	220791490	220814388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220791665_220796642_220796806_220797873_220798066_220805051_220805114_220805202_220805275_220813291
WTC11_00006850	chr1	+	531	2	ISM	ENSG00000228437.5	ENST00000421147.5	455	3	-64	14491	-64	-14491	5prime_fragment	FALSE	canonical	3	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTTTTAAGCACTCC	221966135	False	NA	NA	False	NA	NA	NA	221966276	221968652	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_221966503_221968347
WTC11_00006851	chr1	+	7269	25	ISM	ENSG00000154305.18	ENST00000344922.10	8126	28	-49	3859	-49	98	intron_retention	FALSE	canonical	3	124	junction_6	39.2337855751335	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATGATCTGAACAGTA	222613555	True	NA	NA	False	NA	NA	NA	222618047	222664148	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055
WTC11_00006854	chr1	+	599	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	4	-2	intron_retention	FALSE	canonical	3	30	junction_1	28.9865869364129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAAGCCCTTGTTTTTTT	222813435	True	NA	-2	True	AATAAA	-11	NA	222815114	222837378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
WTC11_00006856	chr1	+	572	4	NIC	ENSG00000154309.9	novel	890	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_1	30.2250815640844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	222813371	True	NA	0	True	AATAAA	-13	NA	222815050	222837380	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995
WTC11_00006858	chr1	+	621	3	FSM	ENSG00000154309.9	ENST00000661663.1	621	3	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813430	True	NA	4	True	AATAAA	-17	NA	222815109	222837384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222815172_222835118_222835216_222836922
WTC11_00006860	chr1	+	5680	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTCAGCGAAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	223024116	223029796	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_223024100_223029800
WTC11_00006862	chr1	+	5284	4	FSM	ENSG00000143756.12	ENST00000424254.6	1334	4	-52	-3898	-52	1	multi-exon	FALSE	canonical	0	0	junction_3	82.0826142100479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTTCTTTGTATTT	NA	False	NA	6	True	AATAAA	-18	NA	224114058	224162048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224157351
WTC11_00006863	chr1	+	5341	4	FSM	ENSG00000143756.12	ENST00000523990.1	1415	4	-60	-3866	-52	1	multi-exon	TRUE	canonical	1	10	junction_2	67.7757741051739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTTCTTTGTATTT	NA	False	NA	6	True	AATAAA	-18	NA	224114058	224162048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224114397_224130471_224130582_224153141_224153338_224157351
WTC11_00006864	chr1	+	2458	3	FSM	ENSG00000143753.13	ENST00000415210.5	957	3	-413	-1088	-413	0	multi-exon	FALSE	canonical	2	5	junction_1	100.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	NA	False	NA	19	True	AATAAA	-28	NA	224175342	224193441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224175948_224189576_224190320_224192331
WTC11_00006867	chr1	+	367	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTCCTTAGAATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	224459203	224459570	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_224459200_224459600
WTC11_00006868	chr1	+	3027	6	ISM	ENSG00000185842.16	ENST00000366850.7	1103	7	78	-1906	24	0	intron_retention	FALSE	canonical	3	219	junction_3	25.255494451703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	224925506	True	NA	3	True	AATAAA	-16	NA	224929738	224969829	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430
WTC11_00006869	chr1	+	1066	5	FSM	ENSG00000163041.13	ENST00000366816.5	799	5	207	-474	207	0	multi-exon	TRUE	canonical	2	82	junction_1	2222.70842667229	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACCTGCTTTTGGTCTT	226061960	False	NA	NA	False	ATTAAA	-11	NA	226062057	226071997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062095_226062734_226062812_226064328_226064480_226065655_226065810_226071350
WTC11_00006870	chr1	+	347	1	FSM	ENSG00000270598.1	ENST00000605837.1	169	1	81	-259	81	259	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTGCAAAAAAAAAAAAAAGA	226127079	False	NA	NA	False	GATAAA	-15	NA	226127258	226127605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226127300_226127600
WTC11_00006872	chr1	+	2141	11	FSM	ENSG00000163050.18	ENST00000485462.5	2141	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	29.2362788329842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	NA	False	NA	22	True	AATAAA	-19	NA	226977403	226987544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
WTC11_00006874	chr1	+	3052	5	NIC	ENSG00000181450.18	novel	929	6	NA	NA	2	2226	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	13.5922772190682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGTCTGAGGAGTTTT	227558700	True	NA	4	True	AATAAA	-17	NA	227563552	227679669	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335_227654477_227677178
WTC11_00006876	chr1	+	630	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	-50	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1379.53200760258	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGCACTCACTACGCCA	228053222	True	NA	NA	False	NA	NA	NA	228082740	228097896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
WTC11_00006878	chr1	+	958	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	-21	0	-21	0	multi-exon	FALSE	canonical	2	7	junction_1	477.416174926691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	228139928	False	NA	NA	False	NA	NA	NA	228139940	228148840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00006879	chr1	+	2427	1	FSM	ENSG00000154358.23	ENST00000602685.1	2267	1	29	-189	29	189	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTCCTTTGGCACCC	NA	False	NA	NA	False	NA	NA	NA	228299844	228302271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228299800_228302300
WTC11_00006882	chr1	+	1148	7	FSM	ENSG00000154358.23	ENST00000664862.1	2238	7	1090	0	1090	0	multi-exon	FALSE	canonical	2	4	junction_3	1.97202659436654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGGGGGTCGCTGCA	NA	False	NA	-35	True	NA	NA	NA	228376007	228378822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228376179_228376792_228376875_228377051_228377292_228377488_228377713_228377930_228378007_228378270_228378421_228378617
WTC11_00006886	chr1	+	614	2	FSM	ENSG00000143641.10	ENST00000488903.1	593	2	-21	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTAGTTTCTGCGTT	230063895	True	NA	NA	False	ATTAAA	-18	NA	230067237	230092033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230067407_230091588
WTC11_00006892	chr1	+	977	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	-41	-169	-41	0	multi-exon	FALSE	canonical	3	134	junction_1	626.91360382964	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCCTCATGCAACTT	NA	False	NA	15	True	ATTAAA	-17	NA	232950563	232978651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
WTC11_00006894	chr1	+	8063	2	FSM	ENSG00000135778.12	ENST00000490098.1	8705	2	642	0	642	0	multi-exon	FALSE	canonical	3	1491	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCCTCATGCAACTT	232962505	False	NA	15	True	ATTAAA	-17	NA	232962544	232978651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232970119_232978162
WTC11_00006895	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	313.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	234373668	False	NA	12	True	AGTAAA	-17	NA	234373682	234384045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_234373841_234374229_234374390_234383722
WTC11_00006896	chr1	+	2148	18	FSM	ENSG00000284770.2	ENST00000642463.1	2126	18	-22	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	72.1962435162292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGGGAAGTGACCA	NA	False	NA	-51	True	AAAACA	-43	NA	235367390	235448899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419416_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00006899	chr1	+	1922	17	FSM	ENSG00000284770.2	ENST00000646186.1	1908	17	-14	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	48.4264906843352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTATACATAATAGCAA	235363347	True	NA	-26	True	NA	NA	NA	235367415	235448924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419416_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00006900	chr1	+	1697	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	-14	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	50.6653687624667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363347	True	NA	-6	True	NA	NA	NA	235367415	235448944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00006901	chr1	+	1808	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	-7	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.8643453476129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	235363347	True	NA	1	True	AATAAA	-1	NA	235367415	235448951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
WTC11_00006913	chr1	+	1546	9	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	11	1626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.9388992069784	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGGCTATTCAATTCTG	NA	False	NA	0	True	AATAAA	-13	NA	243256051	243318521	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243318036
WTC11_00006914	chr1	+	626	3	FSM	ENSG00000054282.16	ENST00000463042.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTGTAGTGATTGAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	243418016	243476364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_243418077_243426426_243426559_243475930
WTC11_00006915	chr1	+	555	3	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	2216	-7	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	27.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGACTTGAGTTGTA	243487653	False	NA	3	True	AATAAA	-7	NA	243490030	243500082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_243490166_243497866_243497960_243499755
WTC11_00006916	chr1	+	3712	3	NNC	ENSG00000179456.10	novel	3740	2	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTTGTGTGTATTT	244048821	True	NA	13	True	AATAAA	-13	NA	244048854	244057472	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_244048994_244053787_244054476_244054587
WTC11_00006920	chr1	+	2282	9	ISM	ENSG00000162852.14	ENST00000366513.9	5127	11	6	20365	1	-5	5prime_fragment	FALSE	canonical	3	72	junction_3	6.79038842777054	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCATACTACAAGATGT	246564286	True	NA	9	True	AATAAA	-20	NA	246566461	246648230	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138
WTC11_00006924	chr1	-	1799	11	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	183	42	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	85.5324499824482	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	NA	False	AATAAA	-21	NA	29387	14361	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_14830_14969_15039_15795_15948_16606_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18380_24737_24892_29320
WTC11_00006927	chr1	-	3469	7	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	0	345	intron_retention	FALSE	canonical	3	18	junction_6	67.7979022946548	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCGGGGTCAGTGACTG	-195329	False	NA	NA	False	AATAAA	-27	NA	195411	184871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_187288_187379_187578_187754_187891_188129_188267_188438_188585_188790_189078_195262
WTC11_00006929	chr1	-	1833	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4517	339	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	86.3854733158301	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	-199846	False	NA	NA	False	AATAAA	-21	NA	199928	184877	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262_195417_199836
WTC11_00006936	chr1	-	5724	9	NNC	ENSG00000228327.4	novel	6432	16	NA	NA	29969	833	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	24.1337419394507	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGGCCTTACTCCGTC	NA	False	NA	NA	False	NA	NA	NA	744311	725051	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_729805_729897_729956_732016_732208_736712_736771_738833_739025_739802_740036_740128_740187_743285_743351_744194
WTC11_00006938	chr1	-	984	5	ISM	ENSG00000228327.4	ENST00000506640.2	6432	16	-29	42575	14	-3737	5prime_fragment	FALSE	canonical	3	23	junction_4	25.9133170396999	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAGGGCTGCCGGCGA	-777201	True	NA	NA	False	NA	NA	NA	778655	768459	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_768614_769496_769713_772975_773108_774170_774281_778283
WTC11_00006939	chr1	-	4228	1	FSM	ENSG00000223764.2	ENST00000609207.1	4152	1	4	-80	4	80	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAACCTTCCCTCG	NA	False	NA	NA	False	AATAAA	-30	NA	921012	916784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_916800_921000
WTC11_00006941	chr1	-	862	3	FSM	ENSG00000188290.11	ENST00000484667.2	667	3	0	-195	0	187	multi-exon	FALSE	canonical	3	6	junction_2	13	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGCCCTCCGCTCCGCGCC	-999930	False	NA	NA	False	NA	NA	NA	999981	998774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525_999614_999865
WTC11_00006942	chr1	-	887	4	FSM	ENSG00000188290.11	ENST00000304952.11	885	4	0	-2	0	0	multi-exon	FALSE	canonical	2	16	junction_3	7.31816613336672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTCACGAGTTTTCT	-999554	True	NA	1	True	NA	NA	NA	1000097	998961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525_999614_999691_999788_999865
WTC11_00006943	chr1	-	449	2	Antisense	novelGene_ENSG00000217801.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-1068762	False	48	1	True	NA	NA	NA	1068810	1065634	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_1065834_1068560
WTC11_00006944	chr1	-	1883	10	NNC	ENSG00000131591.18	novel	1832	10	NA	NA	2329	0	intron_retention	TRUE	canonical	1	1	junction_9	17.4228457938293	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGAGCTGCTCTCTCCC	NA	False	NA	-6	True	TATAAA	-21	NA	1103798	1081817	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1103722
WTC11_00006945	chr1	-	2015	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	-5	0	0	multi-exon	FALSE	canonical	2	6	junction_2	19.3465759244369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGAGCTGCTCTCTCCC	-1115104	True	NA	-6	True	TATAAA	-21	NA	1116095	1081817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
WTC11_00006947	chr1	-	2325	7	NNC	ENSG00000078808.19	novel	1933	7	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	214.162710728704	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGGCGTGAAACAAA	-1225894	True	NA	-5	True	AATATA	-24	NA	1231985	1216907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1217689_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231506
WTC11_00006948	chr1	-	2593	2	FSM	ENSG00000078808.19	ENST00000478938.1	2591	2	0	-2	0	0	multi-exon	FALSE	canonical	3	573	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTTTTGGTCAGC	-1220267	False	NA	15	True	TTTAAA	-4	NA	1220293	1216931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1217689_1218457
WTC11_00006951	chr1	-	668	7	FSM	ENSG00000127054.22	ENST00000527383.5	668	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	184.293847488792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGGTGGAGTACATGT	-1309685	False	5923	NA	False	NA	NA	NA	1315608	1312938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315519
WTC11_00006952	chr1	-	4384	14	NIC	ENSG00000107404.21	novel	2926	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_3	29.2827473086258	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGGCCTGTGCCC	-1348959	False	NA	-3	True	AAAAAG	-18	NA	1349111	1335277	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
WTC11_00006953	chr1	-	4749	14	NIC	ENSG00000107404.21	novel	3305	15	NA	NA	17	0	intron_retention	FALSE	canonical	3	114	junction_3	14.5028052785227	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGGCCTGTGCCC	-1347624	True	NA	-3	True	AAAAAG	-18	NA	1349401	1335277	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
WTC11_00006955	chr1	-	2061	9	FSM	ENSG00000162576.17	ENST00000342753.8	2231	9	170	0	-69	0	multi-exon	FALSE	canonical	3	4	junction_7	18.0208212909401	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	NA	False	NA	-5	True	AATAAA	-21	NA	1358624	1352688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1356680_1356705_1358455
WTC11_00006957	chr1	-	886	5	NNC	ENSG00000175756.14	novel	875	4	NA	NA	0	5558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2080.0272083557	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGCCCACCTATGG	-1344444	True	NA	NA	False	AAAAAG	-7	NA	1375144	1368171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1368214_1373738_1373903_1373999_1374446_1374704_1374791_1374996
WTC11_00006960	chr1	-	2133	3	NIC	ENSG00000235098.9	novel	2024	4	NA	NA	78	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	7	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGTCTGAGAGGTTT	-1421126	False	NA	1	True	AATAAA	-16	NA	1421182	1418420	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1419550_1420051_1421006_1421132
WTC11_00006961	chr1	-	620	3	NNC	ENSG00000225285.1	novel	424	2	NA	NA	-1008	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGAAGGCGGCCGCGG	-1435411	True	NA	NA	False	NA	NA	NA	1435581	1430549	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1430663_1434177_1434585_1435481
WTC11_00006963	chr1	-	2620	9	NNC	ENSG00000008130.15	novel	1722	10	NA	NA	0	52613	at_least_one_novel_splicesite	TRUE	non_canonical	2	119	junction_1	123.496900264743	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAATAACAGCTTTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	1756608	1698618	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1699313_1751925_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502
WTC11_00006964	chr1	-	957	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	1699578	1698621	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_1698600_1699600
WTC11_00006965	chr1	-	2854	19	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	1493	-502	0	0	3prime_fragment	TRUE	canonical	3	30	junction_7	60.2192496191322	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-1722815	False	NA	NA	False	ATTAAA	-21	NA	1722831	1702378	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707
WTC11_00006970	chr1	-	1125	2	FSM	ENSG00000178821.13	ENST00000378602.3	1118	2	0	-7	0	7	multi-exon	FALSE	canonical	3	79	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGAAGGACTCTGGG	-1918784	False	NA	-1	True	AATAAA	-25	NA	1918797	1917582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1918163_1918252
WTC11_00006972	chr1	-	1413	3	FSM	ENSG00000162585.17	ENST00000400919.7	1413	3	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_1	44	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTGACTGCCAAGTGT	-2181872	True	NA	-4	True	AATGAA	-32	NA	2194775	2184460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2185514_2193638_2193911_2194687
WTC11_00006974	chr1	-	2586	19	NIC	ENSG00000157881.16	novel	2641	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	60	junction_4	41.0626215540227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	NA	False	NA	-5	True	AATAGA	-14	NA	2526575	2508536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510749_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
WTC11_00006975	chr1	-	879	6	FSM	ENSG00000157881.16	ENST00000486396.1	879	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	81.1181853840432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGGGGCCACCCCGTGA	NA	False	NA	NA	False	NA	NA	NA	2526575	2519203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2526463
WTC11_00006976	chr1	-	7448	37	FSM	ENSG00000162591.16	ENST00000356575.9	7443	37	0	-5	0	5	multi-exon	FALSE	canonical	2	9	junction_13	19.2971204594025	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATACTAAATAGTATTTT	-3609600	True	NA	14	True	ATTAAA	-34	NA	3611508	3487945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3490590_3490911_3490960_3492638_3492768_3493770_3493900_3493995_3494125_3494370_3494500_3494612_3494742_3495889_3496019_3496654_3496784_3496987_3497120_3497232_3497362_3498370_3498500_3498697_3498827_3499137_3499267_3499587_3499717_3499795_3499925_3500632_3500765_3500965_3501095_3501176_3501309_3501795_3501922_3505207_3505343_3505421_3505557_3506107_3506237_3507794_3507924_3508557_3508690_3509074_3509246_3509869_3509993_3510782_3510903_3511549_3511688_3512005_3512129_3514549_3514673_3515401_3515528_3524123_3524247_3579824_3579930_3595337_3595448_3602465_3602601_3611137
WTC11_00006978	chr1	-	3088	5	FSM	ENSG00000227372.12	ENST00000648600.1	3088	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	70.3824374400319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	-3741086	False	NA	-10	True	TTTAAA	-25	NA	3746884	3737142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3738514_3740232_3740388_3742803_3742958_3743060_3743191_3745606
WTC11_00006980	chr1	-	2313	5	FSM	ENSG00000227372.12	ENST00000650039.1	2307	5	0	-6	0	0	multi-exon	FALSE	canonical	3	32	junction_1	73.1893947235527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCACGCTATACTTAAAAA	-3741079	False	NA	31	True	NA	NA	NA	3746877	3737205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3737855_3740232_3740388_3742803_3742912_3743060_3743191_3745606
WTC11_00006983	chr1	-	2738	8	NNC	ENSG00000130764.10	novel	4303	7	NA	NA	0	11795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.989161163343	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGCAGAGATCTGTCG	-3788814	True	NA	NA	False	NA	NA	NA	3796498	3766763	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3766860_3780219_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
WTC11_00006984	chr1	-	5858	23	NNC	ENSG00000116198.14	novel	6559	23	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.5595285664831	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGTCACTTTATTT	-3853956	True	NA	NA	False	AATAAA	-11	NA	3857198	3812087	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3813292_3813849_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00006985	chr1	-	1779	5	FSM	ENSG00000198912.12	ENST00000680054.1	1779	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	147.887414947993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-3896637	True	NA	-43	True	AATACA	-14	NA	3900272	3889152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892882_3892997_3900171
WTC11_00006986	chr1	-	4932	30	NIC	ENSG00000131697.18	novel	4955	30	NA	NA	19	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	9.77803600470941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTGGCAGTTTTCTTG	-5991285	True	NA	-3	True	ACTAAA	-13	NA	5992405	5862810	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905781_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154_5986328_5992243
WTC11_00006987	chr1	-	4633	5	NIC	ENSG00000158292.7	novel	4198	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	61	junction_4	11.1887220003001	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCATTCCAAGGCTGG	-6260587	True	NA	-7	True	AATAAA	-19	NA	6261098	6247353	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6250625_6251337_6251531_6253717_6254148_6254549_6255015_6260824
WTC11_00006989	chr1	-	1770	9	FSM	ENSG00000215788.11	ENST00000647810.1	1770	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	34.6013005535919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGGACGGGGCGCAG	-6465443	False	NA	NA	False	NA	NA	NA	6465470	6460785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462664_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439
WTC11_00006990	chr1	-	1859	9	ISM	ENSG00000215788.11	ENST00000356876.8	1968	10	327	290	12	75	3prime_fragment	FALSE	canonical	3	39	junction_4	33.0243754672212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCACCCCGGGATC	-6465836	False	NA	NA	False	NA	NA	NA	6465846	6461075	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439
WTC11_00006991	chr1	-	3483	6	FSM	ENSG00000215788.11	ENST00000513135.5	3483	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	34.3895332913955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-6466089	False	NA	NA	False	ATTAAA	-31	NA	6466099	6461150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6464720_6465087_6465223_6465439
WTC11_00006993	chr1	-	8032	28	Fusion	ENSG00000171680.23_ENSG00000215788.11	novel	3731	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_27	29.2084885344849	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGAGATCGCGGTATT	-6496933	True	NA	NA	False	NA	NA	NA	6497424	6461203	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492_6496570_6497319
WTC11_00006995	chr1	-	2984	8	NIC	ENSG00000171680.23	novel	3938	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_7	18.3225076262581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6470810	True	NA	-12	True	TATAAA	-18	NA	6471583	6467121	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487
WTC11_00006999	chr1	-	536	2	FSM	ENSG00000162408.11	ENST00000460777.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGAGTCTCACTCTGTC	-6550399	False	NA	NA	False	NA	NA	NA	6550488	6549255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6549699_6550395
WTC11_00007000	chr1	-	739	2	NIC	ENSG00000237436.1	novel	415	3	NA	NA	-206	15	intron_retention	FALSE	canonical	3	13	junction_1	0	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCATTCTTCAAGAAACTT	NA	False	NA	17	True	AATAAA	-31	NA	6785049	6783876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6784224_6784657
WTC11_00007002	chr1	-	267	1	FSM	ENSG00000269978.1	ENST00000602916.1	267	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCTTTAAGAGCCAGT	-7700902	False	NA	-17	True	AATAAA	-22	NA	7700970	7700703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_7700700_7701000
WTC11_00007004	chr1	-	2097	2	FSM	ENSG00000116285.13	ENST00000467067.1	2097	2	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATTATTACCTACTAC	-8015590	True	NA	NA	False	NA	NA	NA	8015633	8013426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8015385_8015494
WTC11_00007005	chr1	-	8264	24	FSM	ENSG00000142599.19	ENST00000337907.7	8026	24	-241	3	-66	-3	multi-exon	FALSE	canonical	0	0	junction_22	28.3394226007859	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTCCCGTGCACTG	-8814882	True	NA	-1	True	AATAAA	-22	NA	8817706	8352399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8614560_8614687_8624309_8624381_8655972_8656442_8792403_8792589_8817159
WTC11_00007006	chr1	-	6440	13	NIC	ENSG00000142599.19	novel	8009	23	NA	NA	-39	0	intron_retention	FALSE	canonical	2	7	junction_12	28.4351113160395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGGTGTCTCCCGTGC	-8423750	False	NA	-5	True	AATAAA	-18	NA	8424273	8352403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8424014
WTC11_00007007	chr1	-	7752	22	NIC	ENSG00000142599.19	novel	8009	23	NA	NA	-185	0	intron_retention	FALSE	canonical	0	0	junction_21	24.3836494043989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGGTGTCTCCCGTGC	-8697958	True	NA	-5	True	AATAAA	-18	NA	8703404	8352403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8624309_8624381_8655972_8656442_8703054
WTC11_00007008	chr1	-	7688	22	NIC	ENSG00000142599.19	novel	8009	23	NA	NA	20	0	intron_retention	FALSE	canonical	3	37	junction_21	19.4706593612984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGGTGTCTCCCGTGC	-8817424	False	NA	-5	True	AATAAA	-18	NA	8817445	8352403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8624309_8624381_8655972_8656442_8817159
WTC11_00007009	chr1	-	1815	13	NNC	ENSG00000074800.16	novel	1781	12	NA	NA	0	43180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4963.21109864594	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCCCGCCTCCTCCGCC	-8636993	True	NA	NA	False	ATTAAA	-42	NA	8878686	8817819	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_8817854_8860999_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
WTC11_00007010	chr1	-	536	4	FSM	ENSG00000074800.16	ENST00000486051.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8213.27094132146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATTTTAAGAGTGGCT	-8636995	True	NA	NA	False	AAGAAA	-7	NA	8878688	8870171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8870409_8871890_8871987_8874823_8874918_8878579
WTC11_00007012	chr1	-	5196	4	FSM	ENSG00000180758.12	ENST00000377411.5	5197	4	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTTGGTAAAGTGATT	-9128741	True	NA	-10	True	AATAAA	-18	NA	9129102	9100305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9104635_9105485_9105681_9111275_9111490_9128644
WTC11_00007013	chr1	-	4444	18	NNC	ENSG00000171603.18	novel	4760	19	NA	NA	0	62698	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.701796053372	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGGGCGCGGTGGCTCAT	-9815477	True	NA	NA	False	NA	NA	NA	9823965	9666227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9666257_9729025_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751663_9773271_9773395_9823642
WTC11_00007014	chr1	-	532	2	NIC	ENSG00000231789.3	novel	978	3	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	-9686015	True	NA	2	True	AATAAA	-33	NA	9687551	9672404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9672720_9687334
WTC11_00007016	chr1	-	916	7	NIC	ENSG00000162441.12	novel	652	5	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	49.1584738936794	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCGGGTGTGGTGGCTT	-9940597	False	NA	0	True	AATAAA	-26	NA	9942768	9922109	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
WTC11_00007018	chr1	-	3133	11	ISM	ENSG00000130940.15	ENST00000344008.5	4405	16	4	6027	0	-256	5prime_fragment	FALSE	canonical	3	11	junction_2	5.19230199429887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTTCGCCCCCAT	-10796197	True	NA	NA	False	NA	NA	NA	10796646	10653239	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
WTC11_00007019	chr1	-	545	2	FSM	ENSG00000116649.10	ENST00000475189.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	2586	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTGTGTCTCCTGACC	-11035615	False	NA	-2	True	NA	NA	NA	11055204	11054583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11054886_11054961
WTC11_00007020	chr1	-	366	3	FSM	ENSG00000171824.14	ENST00000490565.1	421	3	55	0	55	0	multi-exon	FALSE	canonical	3	740	junction_2	3.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAAATGCTGGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	11068869	11066684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11066749_11068007_11068085_11068644
WTC11_00007022	chr1	-	1226	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	83	3386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.310205417024	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAATAAAA	-11654283	False	NA	NA	False	NA	NA	NA	11654346	11645000	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11645026_11648389_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
WTC11_00007024	chr1	-	1878	9	FSM	ENSG00000132906.18	ENST00000400777.7	1878	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	44.181444068749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTATGAATTCTAAGT	-15521903	True	NA	-96	True	NA	NA	NA	15524192	15492365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507134_15507872_15507908_15518109_15518396_15524068
WTC11_00007025	chr1	-	2131	1	FSM	ENSG00000233954.6	ENST00000483273.2	2180	1	50	-1	50	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGGTGTGGTGGTACA	NA	False	NA	NA	False	AATAAA	-32	NA	15809298	15807167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15807200_15809300
WTC11_00007027	chr1	-	2612	15	NIC	ENSG00000142632.17	novel	3322	16	NA	NA	19	-250	intron_retention	FALSE	canonical	2	7	junction_14	55.208694967369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16209147	True	NA	-7	True	AATAAA	-17	NA	16212633	16198103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16212501
WTC11_00007029	chr1	-	1545	9	NIC	ENSG00000037637.11	novel	6227	10	NA	NA	53	-270	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	67.6992429795194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAGATCTGAGATTAG	-16349798	True	NA	NA	False	NA	NA	NA	16352427	16251351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16315168_16315436_16352254
WTC11_00007032	chr1	-	1152	1	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	49909	108	39471	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16563578	16562426	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16562400_16563600
WTC11_00007033	chr1	-	1017	7	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	44344	1484	33906	1050	3prime_fragment	TRUE	canonical	3	7	junction_3	15.8157797433098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCAGTGGCACCCTGT	NA	False	NA	NA	False	NA	NA	NA	16569143	16563802	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16564187_16564806_16564919_16565632_16565806_16566407_16566460_16567178_16567352_16567978_16568031_16569072
WTC11_00007035	chr1	-	487	3	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	24427	24741	13989	6502	internal_fragment	FALSE	canonical	3	45	junction_1	0.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCCAGGTAGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	16589060	16587059	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16587262_16587724_16587798_16588848
WTC11_00007036	chr1	-	2527	7	NIC	ENSG00000215908.10	novel	2773	18	NA	NA	0	570	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	16.9771087709958	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCCAAATGTTGCTGA	-16631085	False	NA	NA	False	AATAAA	-31	NA	16631109	16617682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889
WTC11_00007037	chr1	-	3396	12	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	1605	-1	intron_retention	FALSE	canonical	3	45	junction_10	25.8460157263285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTGTTCTCCTGCTG	-16643004	False	NA	-5	True	AATAAA	-25	NA	16643067	16618253	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027
WTC11_00007038	chr1	-	2933	14	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	33.4833704198749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642264	True	NA	-7	True	AATAAA	-23	NA	16644647	16618255	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644445
WTC11_00007040	chr1	-	1672	6	FSM	ENSG00000186715.11	ENST00000650268.1	1672	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	10.303397497913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCACCAAGGACTTTC	-16759261	False	NA	-13	True	AATAAA	-14	NA	16759291	16757127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758712_16758802_16759169_16759268
WTC11_00007041	chr1	-	1052	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	-16889558	False	NA	0	True	AATAAA	-31	NA	16889589	16888537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888500_16889600
WTC11_00007042	chr1	-	340	2	FSM	ENSG00000238142.3	ENST00000416869.2	391	2	51	0	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	-16889611	False	NA	0	True	AATAAA	-31	NA	16889642	16888537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888783_16889547
WTC11_00007043	chr1	-	1138	2	FSM	ENSG00000238142.3	ENST00000671472.2	1203	2	46	19	0	-19	multi-exon	FALSE	canonical	3	120	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACTAAAAAACTAAAAAT	-16889648	False	NA	NA	False	ATTAAA	-2	NA	16889679	16887779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888786_16889547
WTC11_00007044	chr1	-	402	1	FSM	ENSG00000272426.1	ENST00000606899.1	438	1	-32	68	-32	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTCAATGTAATGCC	-16904735	True	NA	NA	False	AATACA	-31	NA	16904808	16904406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16904400_16904800
WTC11_00007045	chr1	-	573	6	FSM	ENSG00000159363.19	ENST00000506174.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	167.606205135729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGCACGCTCTACGC	-17000157	False	NA	NA	False	NA	NA	NA	17000312	16996086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16996165_16996253_16996301_16996385_16996479_16997019_16997176_17000010_17000143_17000245
WTC11_00007046	chr1	-	4361	16	FSM	ENSG00000117115.13	ENST00000375486.9	4361	16	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	4.65713311908613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTTGGTGTGATGT	-17118983	True	NA	-1	True	AATAAA	-19	NA	17119451	17066760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17069278_17070087_17070217_17071405_17071492_17074855_17074950_17075678_17075824_17079263_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
WTC11_00007047	chr1	-	2129	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	-5	0	5	multi-exon	FALSE	canonical	2	6	junction_1	45.1750176781617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGATGGTCTTTCTGG	-18899442	True	NA	0	True	AATAAA	-21	NA	18902553	18871424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
WTC11_00007048	chr1	-	6165	9	FSM	ENSG00000169991.11	ENST00000455833.7	6179	9	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_3	0.992156741649222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTTTTTTTTGTTTTT	-18956349	True	NA	1	True	AATAAA	-21	NA	18956662	18904279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18908667_18910341_18910473_18911383_18911477_18911962_18912084_18916902_18917043_18918361_18918503_18919677_18919774_18921060_18921122_18955667
WTC11_00007049	chr1	-	1527	4	FSM	ENSG00000127481.15	ENST00000375225.7	1533	4	6	0	6	0	multi-exon	FALSE	canonical	3	305	junction_3	20.4993224820291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	-19082224	False	NA	-4	True	AATAAA	-26	NA	19082234	19074509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19074897_19076739_19076903_19077975_19078067_19081348
WTC11_00007052	chr1	-	989	3	FSM	ENSG00000053371.13	ENST00000492217.1	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTATTGTAATTAACTG	-19307044	True	NA	NA	False	NA	NA	NA	19312103	19307738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19308263_19308454_19308643_19311826
WTC11_00007053	chr1	-	3084	16	NNC	ENSG00000162542.14	novel	2946	16	NA	NA	-10	31	intron_retention	TRUE	canonical	1	1	junction_15	15.2615712020603	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTGCCTGGGTTGTG	-19799731	True	NA	3	True	NA	NA	NA	19799926	19682208	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19799173_19799350_19799854
WTC11_00007054	chr1	-	2919	15	NIC	ENSG00000162542.14	novel	2946	16	NA	NA	0	23	intron_retention	FALSE	canonical	3	7	junction_14	10.74186925549	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATACCAAGTGGTTGCCT	-19799884	False	NA	-5	True	AATAAA	-39	NA	19799945	19682216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19799854
WTC11_00007055	chr1	-	2356	9	FSM	ENSG00000117245.13	ENST00000490034.5	1931	9	-423	-2	-423	2	multi-exon	FALSE	canonical	2	6	junction_7	14.4259964993757	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTCTGACCCTCTG	NA	False	NA	-8	True	AATAAA	-18	NA	20698862	20664011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20664763_20666213_20666332_20670420_20670492_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20690187_20690336_20698378
WTC11_00007056	chr1	-	3503	10	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	148	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	9.18936583472681	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTGCTACAGACTTTT	-20731679	True	NA	-16	True	AATAAA	-15	NA	20732130	20719729	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20732003
WTC11_00007057	chr1	-	4293	9	NIC	ENSG00000189410.12	novel	3898	10	NA	NA	266	-5	intron_retention	FALSE	canonical	2	3	junction_8	10.8907931299791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGATTGTCTGCTACA	-20730458	False	NA	-23	True	AATAAA	-8	NA	20730909	20719736	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20730745
WTC11_00007058	chr1	-	4342	13	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	23	junction_11	132.180327162891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20781966	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780349_20780541_20786185
WTC11_00007059	chr1	-	4280	13	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	24	junction_12	116.664374977492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20781966	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786252
WTC11_00007061	chr1	-	3795	12	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-93	0	intron_retention	FALSE	canonical	2	20	junction_11	115.667234301288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20786749	False	NA	-21	True	AATAAA	-19	NA	20786759	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20786648
WTC11_00007062	chr1	-	6310	12	NNC	ENSG00000127483.19	novel	6406	13	NA	NA	-9	0	intron_retention	FALSE	canonical	2	15	junction_9	157.430714131856	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20787322	False	NA	-21	True	AATAAA	-19	NA	20787332	20742678	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749976_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20776006_20776596_20776751_20779811_20779912_20787194
WTC11_00007063	chr1	-	7699	33	NIC	ENSG00000075151.24	novel	7832	36	NA	NA	5	28	combination_of_known_junctions	FALSE	canonical	3	21	junction_32	60.0761804789344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCATGTGTGCCCAT	NA	False	NA	-5	True	AGTAAA	-20	NA	21113124	20806450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21111322
WTC11_00007064	chr1	-	7810	34	NIC	ENSG00000075151.24	novel	6064	35	NA	NA	5	28	combination_of_known_junctions	FALSE	canonical	3	21	junction_33	72.514360061023	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCATGTGTGCCCAT	NA	False	NA	-5	True	AGTAAA	-20	NA	21113124	20806450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21111322
WTC11_00007065	chr1	-	6308	35	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	2	28	combination_of_known_junctions	FALSE	canonical	3	30	junction_30	65.7356823254756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCATGTGTGCCCAT	-21168756	True	NA	-5	True	AGTAAA	-20	NA	21176834	20806450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00007066	chr1	-	6318	35	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	0	28	combination_of_known_junctions	FALSE	canonical	3	30	junction_30	63.8646452004111	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCATGTGTGCCCAT	-21168769	True	NA	-5	True	AGTAAA	-20	NA	21176847	20806450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00007070	chr1	-	6188	34	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	3	14	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	70.024133318561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTTTGGACAGCTGCT	-21168803	True	NA	-19	True	AATAAA	-37	NA	21176881	20806464	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00007071	chr1	-	6186	34	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	6	9	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	71.9618432716418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	-21168800	True	NA	-24	True	AATAAA	-32	NA	21176878	20806469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00007073	chr1	-	216	1	FSM	ENSG00000236073.2	ENST00000431514.2	115	1	-170	69	-170	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGAGCCCTTGGTAAT	NA	False	NA	NA	False	AATACA	-20	NA	21073923	21073707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21073700_21073900
WTC11_00007074	chr1	-	2124	5	NNC	ENSG00000227001.3	novel	661	5	NA	NA	94	1518	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	24.8834784545891	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	-21427863	False	NA	NA	False	ATTAAA	-16	NA	21427873	21423106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_21424864_21425467_21425520_21426233_21426407_21427021_21427074_21427783
WTC11_00007075	chr1	-	3799	27	NIC	ENSG00000090686.16	novel	4419	27	NA	NA	12	0	intron_retention	FALSE	canonical	3	45	junction_18	50.9057750063201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	-21769712	True	NA	-24	True	AATAAA	-21	NA	21783137	21678902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00007077	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	29.6797723860694	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	-23163217	True	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
WTC11_00007079	chr1	-	1277	11	FSM	ENSG00000204219.11	ENST00000450454.7	1719	11	0	442	0	-442	multi-exon	FALSE	canonical	0	0	junction_4	1.26885775404495	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGTATGAGTTAGAGGA	-23424728	True	NA	NA	False	AATAAA	-39	NA	23424748	23381350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23381475_23384345_23384418_23387272_23387420_23393878_23394034_23397544_23397602_23397791_23397956_23408663_23408727_23417248_23417391_23417903_23418010_23419076_23419140_23424564
WTC11_00007080	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	10	junction_2	4.54606056566195	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-23777653	True	NA	NA	False	NA	NA	NA	23778287	23760381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
WTC11_00007081	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-23777662	True	NA	-23	True	ATTAAA	-18	NA	23778296	23760520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
WTC11_00007082	chr1	-	2161	10	FSM	ENSG00000117305.15	ENST00000374487.6	2151	10	0	-10	0	8	multi-exon	FALSE	canonical	0	0	junction_9	116.054584858448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTGTGCAGCTGTGTG	-23838565	True	NA	0	True	ATTAAA	-29	NA	23838620	23801876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23826083_23826184_23838063
WTC11_00007084	chr1	-	3604	7	NNC	ENSG00000188529.15	novel	3487	6	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	618.300628065884	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCTTAGATTTGTAA	-23943684	True	NA	1	True	AATAAA	-42	NA	23980331	23964785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23967724_23971337_23971440_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
WTC11_00007085	chr1	-	10089	7	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	-49	13	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	594.784204564983	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTGCTCTTAGATT	-23943758	True	NA	-4	True	AATAAA	-37	NA	23980405	23964790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973_23977454_23977910_23978274_23978652_23978818_23980190
WTC11_00007087	chr1	-	7715	7	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	-68	-7	combination_of_known_junctions	FALSE	canonical	3	58	junction_4	586.574637668179	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATCTTGGGTTTTTT	-23943777	True	NA	-24	True	AATAAA	-17	NA	23980424	23964810	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
WTC11_00007093	chr1	-	970	2	FSM	ENSG00000117616.18	ENST00000450820.2	970	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGTGAAACCCCTTC	-25267679	True	NA	NA	False	NA	NA	NA	25267885	25253113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25253938_25267739
WTC11_00007094	chr1	-	3876	3	NNC	ENSG00000117616.18	novel	945	2	NA	NA	-48	2807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCTGAACTCCAAGATG	NA	False	NA	NA	False	NA	NA	NA	25338261	25332560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_25333303_25333708_25335621_25337039
WTC11_00007095	chr1	-	1125	1	FSM	ENSG00000228172.5	ENST00000536896.2	2307	1	-39	1221	-39	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCGTCGCGTCTCCCTG	NA	False	NA	NA	False	NA	NA	NA	25820836	25819711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25819700_25820800
WTC11_00007096	chr1	-	2465	2	FSM	ENSG00000182749.6	ENST00000374296.4	3023	2	558	0	558	0	multi-exon	FALSE	canonical	2	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	-25870664	False	NA	-2	True	AATAAA	-19	NA	25870695	25861483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25863862_25870608
WTC11_00007097	chr1	-	3371	10	NIC	ENSG00000158006.14	novel	3487	11	NA	NA	3	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	25.6721975762704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAGAAGTTGTTGGC	-25997136	True	NA	-15	True	AAAAAG	-8	NA	25998052	25959774	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25989447_25989602_25990726_25990864_25998024
WTC11_00007098	chr1	-	1641	15	FSM	ENSG00000158062.21	ENST00000374222.6	1660	15	19	0	3	0	multi-exon	FALSE	canonical	3	22	junction_12	29.6764869475991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305433	True	NA	NA	False	AATAAA	-17	NA	26306617	26282281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
WTC11_00007099	chr1	-	1672	15	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_12	31.8639486644357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305435	True	NA	NA	False	AATAAA	-17	NA	26306619	26282281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301054_26301693_26301723_26302812_26302919_26306591
WTC11_00007100	chr1	-	3553	19	Fusion	ENSG00000158062.21_ENSG00000176092.17	novel	1944	15	NA	NA	-93	-3	intron_retention	TRUE	canonical	1	1	junction_10	37.5932174733688	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACCCGCTGCTCCGCCA	-26336030	True	NA	NA	False	AATAAA	-12	NA	26336476	26282286	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297949_26298063_26302812_26302919_26306591_26306705_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
WTC11_00007101	chr1	-	691	4	FSM	ENSG00000176092.17	ENST00000374211.5	691	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	43.7442059655397	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCAGGTACCCTTGTC	-26324971	False	NA	-20	True	NA	NA	NA	26324981	26321876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26322057_26322163_26322324_26324151_26324311_26324789
WTC11_00007102	chr1	-	1031	1	FSM	ENSG00000260063.1	ENST00000569378.1	2000	1	1017	-48	1017	48	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTTTGAGAAATGTTA	-26693093	False	NA	NA	False	NA	NA	NA	26693114	26692083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26692100_26693100
WTC11_00007104	chr1	-	509	2	FSM	ENSG00000142733.17	ENST00000495230.2	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTAGTTGAGGCTCAG	-27357684	False	NA	NA	False	NA	NA	NA	27357808	27357165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27357577_27357710
WTC11_00007105	chr1	-	393	3	FSM	ENSG00000142748.13	ENST00000498393.1	931	3	415	123	415	-123	multi-exon	TRUE	canonical	2	2	junction_2	1	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGCCTAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	27373263	27370595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27370731_27370842_27370973_27373135
WTC11_00007106	chr1	-	928	6	FSM	ENSG00000174950.11	ENST00000374030.3	946	6	18	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	4.60434577328853	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27382857	True	NA	-4	True	AATAAA	-17	NA	27383315	27379175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
WTC11_00007107	chr1	-	6023	6	FSM	ENSG00000126705.15	ENST00000247087.10	6335	6	98	214	-15	-4	multi-exon	FALSE	canonical	1	1	junction_4	14.8512625725896	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTTGTGTCTTGTGAA	-27603483	False	3251	-2	True	AAAAAG	-36	NA	27603494	27534248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553186_27558705_27558884_27603396
WTC11_00007108	chr1	-	6634	8	NIC	ENSG00000126705.15	novel	6428	9	NA	NA	-91	-12	intron_retention	FALSE	canonical	1	2	junction_4	13.4483137551569	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAACCTTGTGT	-27604004	False	NA	-10	True	ATTAAA	-44	NA	27604015	27534256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553291_27558304_27558531_27558705_27558884_27603396_27603495_27603727
WTC11_00007109	chr1	-	5075	9	ISM	ENSG00000158161.16	ENST00000373864.5	2459	14	47001	-3124	0	0	3prime_fragment	FALSE	canonical	3	49	junction_1	17.2549811648695	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTCCTGTGTCTTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	28011086	27970343	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946
WTC11_00007111	chr1	-	1721	16	ISM	ENSG00000158161.16	ENST00000373871.8	5999	18	20	18145	7	-10	5prime_fragment	FALSE	canonical	3	24	junction_9	20.9522207786085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTCATGATGCACCTA	-28086122	True	NA	-27	True	AATAAA	-4	NA	28088590	27988488	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
WTC11_00007114	chr1	-	1517	10	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	0	31829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	821.089805767799	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTCTTTTGAATATAT	-28209836	True	NA	NA	False	NA	NA	NA	28233025	28167626	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28167664_28200556_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
WTC11_00007115	chr1	-	1914	1	FSM	ENSG00000270605.1	ENST00000604716.1	1945	1	31	0	31	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTTCTTGAACTTCA	NA	False	NA	1	True	AATAAA	-18	NA	28241422	28239508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28239500_28241400
WTC11_00007116	chr1	-	552	6	FSM	ENSG00000197989.15	ENST00000531126.7	728	6	178	-2	-72	2	multi-exon	FALSE	canonical	3	12	junction_2	29.1231866388278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTATTTTTTTG	-28578244	False	NA	NA	False	AATAAA	-30	NA	28581695	28578535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581110_28581230_28581589
WTC11_00007117	chr1	-	1802	4	FSM	ENSG00000197989.15	ENST00000481368.6	1800	4	0	-2	0	2	multi-exon	FALSE	canonical	3	69	junction_2	14.4299072146089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTATTTTTTTG	-28578422	True	NA	NA	False	AATAAA	-30	NA	28581873	28578535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579588_28579911_28581230_28581589
WTC11_00007118	chr1	-	285	1	FSM	ENSG00000225616.2	ENST00000425821.2	331	1	-39	85	-39	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGACGAGAGGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	28982647	28982362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28982400_28982600
WTC11_00007119	chr1	-	2835	6	NIC	ENSG00000084628.10	novel	2922	7	NA	NA	0	-6	intron_retention	FALSE	canonical	2	7	junction_4	39.1274839467094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATCTTCCTGTCCTGC	-31237075	True	NA	-19	True	ATTAAA	-14	NA	31239887	31179750	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31188049_31188188_31239493
WTC11_00007122	chr1	-	547	7	FSM	ENSG00000084636.18	ENST00000529928.1	581	7	34	0	34	0	multi-exon	FALSE	canonical	3	13	junction_3	1.5723301886761	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAACCTGGGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	31689934	31685681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740
WTC11_00007123	chr1	-	7760	28	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	127	3471	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	21.8896095638709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGACTGAGATATT	-31764191	False	NA	NA	False	ATTAAA	-29	NA	31764213	31723645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31763883
WTC11_00007124	chr1	-	5233	29	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	21.2665301853041	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTGAGCTGTTTG	-31763335	True	NA	-11	True	AATAAA	-15	NA	31764340	31727116	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998_31756816_31763883
WTC11_00007125	chr1	-	3847	8	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	0	2800	intron_retention	TRUE	non_canonical	0	0	junction_1	755.21293118469	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACCCCGATCGATGGTC	-31925252	True	NA	NA	False	AAAAAG	-1	NA	31938368	31903620	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_31903651_31906425_31908112_31908199_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
WTC11_00007126	chr1	-	1390	5	NIC	ENSG00000184007.22	novel	3910	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	173	junction_3	651.033553282778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAGAGAAAAGGA	-31938159	False	NA	-23	True	AATAAA	-10	NA	31938178	31908657	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31908961_31910037_31910113_31911695_31911827_31918969_31919659_31937986
WTC11_00007129	chr1	-	1269	4	ISM	ENSG00000160055.20	ENST00000309777.11	1107	5	128	-2	94	-1	3prime_fragment	FALSE	canonical	3	47	junction_1	5.18544972870135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTAGTAAGTATTCTT	-32221731	True	NA	-1	True	AATAAA	-18	NA	32222225	32216197	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866
WTC11_00007130	chr1	-	1590	3	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	0	53409	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6724	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAGAAAAGAGCTGG	-32269764	True	NA	NA	False	AAAAAG	-14	NA	32336233	32280429	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32280474_32333838_32335098_32335946
WTC11_00007131	chr1	-	699	3	FSM	ENSG00000225828.2	ENST00000432622.2	941	3	242	0	242	0	multi-exon	FALSE	canonical	2	2	junction_2	5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGGCTGGCAGTGTATG	NA	False	NA	-3	True	AATAAA	-25	NA	32362243	32361269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32361536_32361729_32361877_32361957
WTC11_00007136	chr1	-	517	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	307.220181628747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638458	True	NA	-6	True	AATAAA	-17	NA	32650535	32621829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650432
WTC11_00007137	chr1	-	234	3	NIC	ENSG00000176261.16	novel	817	4	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	41	junction_2	414.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTACGAAGAACTGTTTT	-32638446	True	NA	-19	True	AATAAA	-4	NA	32650523	32621842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32650432
WTC11_00007138	chr1	-	511	7	NIC	ENSG00000176261.16	novel	588	7	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	271.294223225552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGACTCCTACGAAG	-32638445	True	NA	-28	True	NA	NA	NA	32650522	32621851	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650428
WTC11_00007139	chr1	-	1582	5	FSM	ENSG00000134684.12	ENST00000487404.5	2197	5	615	0	615	0	multi-exon	FALSE	canonical	3	1058	junction_4	84.1884047835567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCACAGTCCTTATAATT	-32783111	False	NA	-22	True	AATATA	-17	NA	32783140	32775680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403
WTC11_00007142	chr1	-	2465	7	NIC	ENSG00000134686.20	novel	2548	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	10.7393357957247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	-33349305	True	NA	-2	True	AATAAA	-14	NA	33349895	33323625	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334184_33334293_33349596
WTC11_00007143	chr1	-	4803	14	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	622405	-452	29765	452	3prime_fragment	FALSE	canonical	2	6	junction_1	1.97618962748694	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATATTGAGACTCTATAA	NA	False	NA	NA	False	NA	NA	NA	33542825	33513545	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33516571_33519464_33519678_33519811_33519951_33521462_33521551_33523306_33523420_33524881_33525044_33527195_33527259_33533049_33533230_33533795_33533908_33537021_33537096_33537435_33537610_33540524_33540699_33541129_33541310_33542719
WTC11_00007145	chr1	-	1382	6	ISM	ENSG00000121904.19	ENST00000373380.5	4379	24	246	65798	246	-58916	5prime_fragment	FALSE	canonical	3	21	junction_3	5.19230199429887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAATGACCCTTCTATTAC	NA	False	NA	NA	False	AATAAA	-14	NA	33709258	33657604	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088
WTC11_00007146	chr1	-	2732	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	285	257533	285	577	5prime_fragment	FALSE	canonical	2	13	junction_12	9.35822573402079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGATGACTTTTGAG	-34164934	False	NA	NA	False	AATGAA	-27	NA	34164945	33771530	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
WTC11_00007149	chr1	-	5078	16	NIC	ENSG00000163867.17	novel	5122	16	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	3	44	junction_15	19.3914070316382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	-35030907	False	810	1	True	AATAAA	-22	NA	35031717	34986164	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031630
WTC11_00007152	chr1	-	8865	12	NIC	ENSG00000116560.11	novel	3740	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_1	689.969840040338	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35104552	True	NA	-6	True	AATAAA	-19	NA	35193145	35176377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35176475_35177318_35177400_35177988_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
WTC11_00007153	chr1	-	4596	21	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	0	2	combination_of_known_junctions	TRUE	canonical	3	44	junction_20	55.2290458001947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGCTGGGTGTGCT	-35551986	True	NA	-5	True	ATTAAA	-20	NA	35557375	35433489	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557361
WTC11_00007154	chr1	-	1301	8	NNC	ENSG00000126067.12	novel	4426	6	NA	NA	0	-986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1200.02712554376	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATTTATTTTTAATAA	-35603959	True	NA	-68	True	NA	NA	NA	35641526	35600529	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_35600828_35600910_35601085_35603137_35603375_35605232_35605283_35609245_35609409_35631273_35631345_35636309_35636433_35641341
WTC11_00007155	chr1	-	2630	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	-2	0	2	multi-exon	FALSE	canonical	3	56	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGAGTATGTGTTTTT	-35718413	True	NA	NA	False	AATAAA	-19	NA	35718884	35713874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35716327_35718706
WTC11_00007156	chr1	-	2607	8	NNC	ENSG00000092853.14	novel	3977	24	NA	NA	1	-12433	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	36.5178178483896	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAGTATTTTCTTAAA	-35767547	True	NA	-7	True	AATAAA	-15	NA	35769966	35759397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769858
WTC11_00007157	chr1	-	2435	3	FSM	ENSG00000054116.12	ENST00000462715.1	2428	3	3	-10	3	-1	multi-exon	FALSE	canonical	3	479	junction_1	36	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCCTGTTTTCTTTCTG	-36137960	False	NA	-1	True	AATAAA	-27	NA	36140995	36136570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137979_36139719_36139820_36140068
WTC11_00007158	chr1	-	1325	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	10	1	-7	-1	multi-exon	FALSE	canonical	2	7	junction_3	215.444888544611	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCCTGTTTTCTTTCTG	-36149484	False	NA	-1	True	AATAAA	-27	NA	36149504	36136570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
WTC11_00007159	chr1	-	3850	12	FSM	ENSG00000196182.11	ENST00000373129.7	3846	12	0	-4	0	4	multi-exon	TRUE	canonical	1	1	junction_10	44.8129261163276	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCTCCTGCCTTCT	-36384155	True	NA	0	True	AATAAA	-25	NA	36385884	36339619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36367847_36368085_36385722
WTC11_00007160	chr1	-	728	5	ISM	ENSG00000116885.18	ENST00000433045.6	1381	10	18088	-21	-17	-11	3prime_fragment	FALSE	canonical	3	15	junction_2	2.48746859276655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTAAACTTGACCTT	NA	False	NA	-15	True	AATATA	-4	NA	36422887	36417921	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767
WTC11_00007161	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43705983732471	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-36450284	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
WTC11_00007162	chr1	-	2335	3	FSM	ENSG00000116898.12	ENST00000488606.5	2127	3	-208	0	-208	0	multi-exon	FALSE	canonical	3	1635	junction_1	82.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGTCTTGAAGAATG	-36438581	False	NA	-29	True	AATAAA	-16	NA	36459911	36455771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36455926_36456186_36456379_36457922
WTC11_00007163	chr1	-	3663	5	NNC	ENSG00000163877.11	novel	4554	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.6066017177982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-37552375	True	NA	0	True	ATTAAA	-22	NA	37554290	37534448	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37535171_37536058_37538013_37540156_37540756_37552644_37552748_37554005
WTC11_00007166	chr1	-	2480	6	NNC	ENSG00000116922.15	novel	919	5	NA	NA	0	26940	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.597770133052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAACCACCTCCTGGCC	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37654629	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37654656_37681572_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690215
WTC11_00007167	chr1	-	2714	6	NNC	ENSG00000116922.15	novel	2696	5	NA	NA	0	22055	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.738776835151	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATGCTCACCTCAT	-37686740	True	NA	NA	False	NA	NA	NA	37690520	37659514	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37659543_37681570_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
WTC11_00007168	chr1	-	2456	5	NIC	ENSG00000116922.15	novel	919	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_4	75.1078391381352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGTGTCAAGTCTTAT	-37686724	True	NA	-1	True	AATAAA	-12	NA	37690504	37681570	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690215
WTC11_00007170	chr1	-	706	2	FSM	ENSG00000116922.15	ENST00000498448.1	747	2	0	41	0	-41	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCCTGAGGATCTCC	-37692047	True	NA	NA	False	NA	NA	NA	37692242	37691088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37691582_37692029
WTC11_00007172	chr1	-	4679	24	FSM	ENSG00000204084.13	ENST00000373023.6	4694	24	15	0	9	0	multi-exon	FALSE	non_canonical	0	0	junction_22	79.8220137257655	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37946102	True	NA	-2	True	GATAAA	-17	NA	37947042	37860696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
WTC11_00007173	chr1	-	3049	24	NNC	ENSG00000204084.13	novel	4450	24	NA	NA	9	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	86.1656645023436	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTTATTTAACACAGATT	-37946102	True	NA	-2	True	AATAAA	-22	NA	37947042	37862082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889721_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
WTC11_00007174	chr1	-	2634	18	NNC	ENSG00000204084.13	novel	3905	18	NA	NA	48	-21	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	49.7382769481576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTTTAGTTATTTAACA	-37928948	False	NA	-8	True	AATAAA	-16	NA	37931701	37862088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878493_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
WTC11_00007177	chr1	-	1391	14	NIC	ENSG00000183431.12	novel	2774	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_5	432.768834258343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTAGAAACAAGGCATG	-37968463	True	NA	-53	True	NA	NA	NA	37989973	37958062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
WTC11_00007178	chr1	-	891	10	FSM	ENSG00000183431.12	ENST00000489537.5	891	10	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_1	68.4426406688725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGAGTGGCTGGGGTAG	-37989571	False	NA	NA	False	NA	NA	NA	37989650	37978722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547
WTC11_00007179	chr1	-	2159	4	Antisense	novelGene_ENSG00000200796.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_3	5.35412613473634	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTGTTTATTATTCAA	NA	False	NA	27	True	TATAAA	-2	NA	38430744	38300168	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_38300438_38311252_38311381_38427466_38427614_38429129
WTC11_00007180	chr1	-	3645	3	Antisense	novelGene_ENSG00000200796.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_1	2.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTTTCTTTTATA	NA	False	NA	4	True	AGTAAA	-28	NA	38430737	38300191	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_38300438_38311252_38311381_38427466
WTC11_00007181	chr1	-	1379	3	FSM	ENSG00000243970.4	ENST00000649325.1	2241	3	857	5	857	-2	multi-exon	FALSE	canonical	2	3	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTTGGTCTCATAAAG	NA	False	NA	NA	False	AATAAA	-13	NA	39524828	39522284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39522506_39523561_39523698_39523806
WTC11_00007182	chr1	-	1286	8	FSM	ENSG00000090621.15	ENST00000677708.1	1286	8	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	135.627039625404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564894	False	NA	-14	True	AATAAA	-21	NA	39565001	39560815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685
WTC11_00007183	chr1	-	1128	9	FSM	ENSG00000090621.15	ENST00000678469.1	1128	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	246.526874802728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39565029	False	59	-14	True	AATAAA	-21	NA	39565136	39560815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563526_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105
WTC11_00007184	chr1	-	2870	17	NIC	ENSG00000090621.15	novel	3048	16	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_16	176.74098279686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564841	True	NA	-14	True	AATAAA	-21	NA	39576894	39560815	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758_39576224_39576551
WTC11_00007188	chr1	-	1154	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	2	0	2	0	multi-exon	FALSE	canonical	3	26	junction_7	40.2380670611341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-39880756	True	NA	NA	False	NA	NA	NA	39883509	39841625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
WTC11_00007189	chr1	-	2843	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	9	0	-4	0	multi-exon	FALSE	canonical	1	6	junction_31	5.88795839916535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-40317209	True	NA	33	True	NA	NA	NA	40317277	40300488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
WTC11_00007190	chr1	-	843	14	FSM	ENSG00000049089.15	ENST00000488463.6	843	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	4.25100057835326	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCTCTTTTTGCTCCC	-40315370	False	NA	NA	False	TATAAA	-37	NA	40315438	40310110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315237
WTC11_00007191	chr1	-	255	1	FSM	ENSG00000227311.3	ENST00000600955.1	480	1	39	186	39	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGCCGAGATAGCTTC	NA	False	NA	NA	False	NA	NA	NA	40333518	40333263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40333300_40333500
WTC11_00007192	chr1	-	5337	13	NNC	ENSG00000198815.9	novel	5225	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	35.3140670743733	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-42330012	True	NA	-12	True	AATAAA	-19	NA	42335235	42176547	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278785_42311049_42311111_42335058
WTC11_00007193	chr1	-	397	1	FSM	ENSG00000235002.1	ENST00000411908.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTAATAGATATTAATA	NA	False	NA	NA	False	AATACA	-33	NA	42412794	42412397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42412400_42412800
WTC11_00007194	chr1	-	590	1	FSM	ENSG00000236876.3	ENST00000424567.1	135	1	0	-455	0	455	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCCCAGCACTTTGGGA	NA	False	NA	NA	False	AATACA	-25	NA	42500339	42499749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42499700_42500300
WTC11_00007195	chr1	-	1960	11	NIC	ENSG00000117395.13	novel	1503	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_9	547.939376208719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	-43261718	False	NA	-43	True	NA	NA	NA	43261910	43164345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172864_43215265_43215394_43261841
WTC11_00007196	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.8173851594107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-43366206	True	NA	NA	False	NA	NA	NA	43368007	43363755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
WTC11_00007199	chr1	-	485	2	FSM	ENSG00000178922.18	ENST00000483618.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	-43451730	False	NA	-3	True	ATTAAA	-20	NA	43451740	43451152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451545_43451647
WTC11_00007200	chr1	-	797	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	-1	0	0	multi-exon	FALSE	canonical	2	8	junction_6	14.7648230602334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	-43453706	False	NA	-3	True	ATTAAA	-20	NA	43453716	43451152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
WTC11_00007201	chr1	-	2180	6	FSM	ENSG00000178922.18	ENST00000372427.5	2173	6	0	-7	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.95315042645489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	-43453899	False	375	-3	True	ATTAAA	-20	NA	43453909	43451152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204
WTC11_00007203	chr1	-	3389	4	FSM	ENSG00000236200.7	ENST00000659644.2	3391	4	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	2.44948974278318	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGCGTGAACCTGGG	-43707125	True	NA	NA	False	NA	NA	NA	43707369	43699839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43702729_43703563_43703648_43704352_43704458_43707058
WTC11_00007204	chr1	-	686	5	FSM	ENSG00000236200.7	ENST00000439057.6	948	5	30	232	24	-83	multi-exon	FALSE	canonical	2	4	junction_1	4.43705983732471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATGTCTACTAAAAATAC	-43707097	False	NA	NA	False	NA	NA	NA	43707341	43699922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43700064_43702655_43702729_43703563_43703648_43704352_43704458_43707058
WTC11_00007206	chr1	-	1716	10	NNC	ENSG00000117419.16	novel	1417	10	NA	NA	0	54341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.200944773226	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACATAGACATGAAAG	-44347546	True	NA	NA	False	NA	NA	NA	44355238	44166728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44166754_44221092_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
WTC11_00007209	chr1	-	1139	7	FSM	ENSG00000117419.16	ENST00000372259.9	1332	7	193	0	193	0	multi-exon	FALSE	canonical	1	4	junction_6	425.71459531788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44322850	44221069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44322724
WTC11_00007211	chr1	-	1081	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_6	360.919543204115	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355327	44221069	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
WTC11_00007212	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673280	True	NA	-1	True	AATAAA	-20	NA	44674477	44635237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44636458_44645359_44645465_44674330
WTC11_00007213	chr1	-	2074	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACCGTGGTGATCACGG	-44673245	True	NA	NA	False	AATAAA	-16	NA	44674442	44653247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44655210_44674330
WTC11_00007215	chr1	-	3587	21	NNC	ENSG00000126107.15	novel	3597	21	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	45.5998629383905	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	-45008775	True	NA	-7	True	AATAAA	-13	NA	45011317	45002547	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009681_45009985_45010122_45010200_45010294_45010545_45010707_45010888
WTC11_00007216	chr1	-	5872	14	FSM	ENSG00000162415.7	ENST00000359600.6	5868	14	0	-4	0	4	multi-exon	FALSE	canonical	2	4	junction_1	3.77001561687472	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTCTCACTAAATG	-45206397	True	NA	3	True	AATAAA	-41	NA	45206605	45016394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45019317_45020065_45020148_45020624_45020789_45034311_45034470_45035687_45035824_45036038_45036300_45038935_45039074_45040391_45040539_45043218_45043396_45051073_45051254_45058608_45058760_45060098_45060248_45087880_45088238_45205755
WTC11_00007217	chr1	-	269	1	FSM	ENSG00000234315.1	ENST00000425293.1	453	1	-20	204	-20	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGGAAGGACTTGCATC	NA	False	NA	NA	False	AGTAAA	-11	NA	45070449	45070180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45070200_45070400
WTC11_00007218	chr1	-	1706	16	FSM	ENSG00000132781.20	ENST00000448481.5	1706	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	86.3268723451098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45339890	False	NA	-2	True	AGTAAA	-20	NA	45339935	45329241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45339898
WTC11_00007220	chr1	-	1629	15	NIC	ENSG00000132781.20	novel	1888	16	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_10	77.4849886712759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTATGTTGTATTTT	-45340212	False	NA	-6	True	AGTAAA	-16	NA	45340257	45329245	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
WTC11_00007222	chr1	-	2780	4	NIC	ENSG00000070759.17	novel	428	3	NA	NA	0	1790	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	18.7320284243028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAGGCAGGAGAAT	-45490351	True	NA	NA	False	NA	NA	NA	45491163	45396942	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45398981_45421724_45421847_45457563_45457872_45490851
WTC11_00007223	chr1	-	2183	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	46	0	14	multi-exon	FALSE	canonical	1	1	junction_2	4.83321838943783	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATATTTTCTATTATAT	NA	False	NA	14	True	AATAAA	-41	NA	45500079	45493911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
WTC11_00007224	chr1	-	3125	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	-1891	0	1769	multi-exon	FALSE	canonical	0	0	junction_5	2914.58042263376	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGGGGCGGGTGTG	-45293173	True	NA	NA	False	GGGGCT	-33	NA	45521938	45509144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
WTC11_00007225	chr1	-	2552	1	FSM	ENSG00000225447.1	ENST00000432472.1	382	1	-151	-2019	-151	2019	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAGCTGAGACAGGAG	-45646338	False	NA	NA	False	AATACA	-45	NA	45646348	45643796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45643800_45646300
WTC11_00007228	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.33333333333333	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-45750177	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
WTC11_00007229	chr1	-	5026	9	FSM	ENSG00000197429.11_ENSG00000230896.1	ENST00000396478.4	3117	9	-118	-1791	-118	139	multi-exon	FALSE	canonical	2	12	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGCTGTGGCAGAAAT	-45750298	True	NA	NA	False	NA	NA	NA	45750771	45696919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
WTC11_00007230	chr1	-	2446	23	NIC	ENSG00000085998.15	novel	2543	23	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	89.6152012636286	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGATGTCTTGTGATT	-46195323	True	NA	-17	True	ATTAAA	-14	NA	46198428	46188688	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46188981_46189241_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
WTC11_00007232	chr1	-	2737	12	NIC	ENSG00000079277.22	novel	1270	12	NA	NA	0	133	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	36.5273587039126	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGTGAAGGAGAA	-46602471	True	NA	NA	False	AATAAA	-17	NA	46604255	46557273	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
WTC11_00007233	chr1	-	2667	13	NIC	ENSG00000079277.22	novel	2661	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	48.9583156028337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-46602470	True	NA	0	True	AATAAA	-24	NA	46604254	46557406	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604164
WTC11_00007236	chr1	-	696	6	ISM	ENSG00000079277.22	ENST00000371946.9	2719	14	-24	17409	8	-1	5prime_fragment	FALSE	canonical	3	113	junction_2	31.7048892128643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCCTTGATTTGGGAG	-46602454	True	NA	-2	True	AATAAA	-19	NA	46604238	46574826	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
WTC11_00007239	chr1	-	4812	18	NIC	ENSG00000123473.17	novel	3901	19	NA	NA	12	0	intron_retention	TRUE	canonical	3	30	junction_3	25.3910591026239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-47311484	True	NA	0	True	AATAAA	-22	NA	47314135	47250138	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263063_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00007240	chr1	-	4856	18	ISM	ENSG00000123473.17	ENST00000337817.10	5351	19	766	-33	21	-1	3prime_fragment	FALSE	canonical	3	32	junction_3	25.1112404007382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-47311475	True	NA	-1	True	AATAAA	-21	NA	47314126	47250139	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00007241	chr1	-	4858	18	NIC	ENSG00000123473.17	novel	5351	19	NA	NA	16	-1	intron_retention	FALSE	canonical	3	37	junction_12	22.8762278207741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-47311480	True	NA	-1	True	AATAAA	-21	NA	47314131	47250139	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
WTC11_00007242	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	6.25025951018329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51344985	True	NA	29	True	NA	NA	NA	51345116	51287257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
WTC11_00007243	chr1	-	2722	18	FSM	ENSG00000085831.16	ENST00000439482.6	2722	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	7.88542521338246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATTTATGAAACATAAAA	-51330450	True	NA	-60	True	NA	NA	NA	51330550	51287346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309431_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
WTC11_00007244	chr1	-	5058	24	NIC	ENSG00000085832.17	novel	5163	25	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_16	29.5803669625789	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-51514836	True	NA	-9	True	AATAAA	-20	NA	51519251	51354262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
WTC11_00007245	chr1	-	3597	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	153	junction_20	180.823022747535	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860300	True	NA	-22	True	AATAAA	-26	NA	51878726	51789209	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816307_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
WTC11_00007246	chr1	-	472	2	FSM	ENSG00000078618.23	ENST00000464385.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGCAATGTGTATTT	-51789761	False	NA	-29	True	AATAAA	-19	NA	51789822	51789216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567
WTC11_00007247	chr1	-	4603	1	Genic_Genomic	ENSG00000169213.7	novel	NA	NA	NA	NA	78148	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGAGTGACTCTTTCCT	-51912541	False	NA	2	True	ATTAAA	-23	NA	51912552	51907949	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_51907900_51912600
WTC11_00007248	chr1	-	10384	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9684277300709	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTAGAGTGACTCTT	-51984986	True	NA	-2	True	ATTAAA	-19	NA	51990693	51907953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51917536_51919926_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
WTC11_00007249	chr1	-	1450	8	NNC	ENSG00000117862.13	novel	1416	7	NA	NA	0	82144	intron_retention	TRUE	non_canonical	0	0	junction_1	471.808029103502	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTTAAAACTTTTTATG	-52041163	True	NA	NA	False	AAAAAG	-10	NA	52055191	51937986	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51938021_52020130_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
WTC11_00007250	chr1	-	2388	8	NNC	ENSG00000117862.13	novel	1416	7	NA	NA	-939	82144	intron_retention	FALSE	non_canonical	0	0	junction_1	471.808029103502	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTTAAAACTTTTTATG	-52055721	True	NA	NA	False	AAAAAG	-10	NA	52056130	51937986	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51938020_52020130_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
WTC11_00007251	chr1	-	5653	30	NNC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-5	intron_retention	FALSE	canonical	3	16	junction_21	49.4392816328371	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	-52548793	True	NA	-12	True	AATAAA	-16	NA	52553082	52423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52423914_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481843_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00007252	chr1	-	5757	30	NNC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-5	intron_retention	FALSE	canonical	3	16	junction_21	47.9920970505597	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	-52548793	True	NA	-12	True	AATAAA	-16	NA	52553082	52423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481843_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00007254	chr1	-	2404	6	ISM	ENSG00000134744.14	ENST00000257177.9	5853	30	114001	128	-1836	0	3prime_fragment	FALSE	canonical	3	61	junction_5	75.1627567349682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTCAGATTTTTTTTC	-52439081	False	NA	-8	True	AATAAA	-16	NA	52439091	52423402	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219
WTC11_00007256	chr1	-	531	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	0	25511	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGATCTTTATTTTTTTGG	-52772632	False	NA	NA	False	AAAACA	-44	NA	52772648	52746682	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_52746715_52772149
WTC11_00007257	chr1	-	1430	10	NNC	ENSG00000121310.17	novel	1556	10	NA	NA	0	9209	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.5751814537915	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGGGCCTGGTGGCA	-52920723	True	NA	NA	False	NA	NA	NA	52921703	52886700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52886726_52895930_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
WTC11_00007258	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	28.1810723626013	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	-52920760	True	NA	2	True	AATAAA	-38	NA	52921740	52895909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
WTC11_00007261	chr1	-	1630	11	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	35.5782236768504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920721	True	NA	-18	True	ATTAAA	-6	NA	52921701	52896231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52912022_52912753_52912850_52913894_52914096_52921552
WTC11_00007264	chr1	-	1912	6	FSM	ENSG00000162384.14	ENST00000483739.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_5	29.7119504576862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTCCTCCTGATTAA	-53219909	False	NA	-3	True	AATAAA	-21	NA	53219920	53214136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866
WTC11_00007265	chr1	-	841	2	FSM	ENSG00000162384.14	ENST00000474227.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACCAAGCAGAGTGG	-53216476	True	NA	NA	False	NA	NA	NA	53220600	53219534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53220345_53220569
WTC11_00007268	chr1	-	297	3	FSM	ENSG00000236253.7	ENST00000566461.1	369	3	0	72	0	-72	multi-exon	FALSE	canonical	1	1	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACCCGGAATGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	53417666	53413234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53413269_53415400_53415525_53417527
WTC11_00007269	chr1	-	1483	10	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	112.202198433602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887585	True	NA	-18	True	AATAAA	-27	NA	53889778	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
WTC11_00007270	chr1	-	1878	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	101.334565745732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887596	True	NA	-18	True	AATAAA	-27	NA	53889789	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
WTC11_00007271	chr1	-	1722	11	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	117.364389829283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887604	True	NA	-18	True	AATAAA	-27	NA	53889797	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889243_53889464_53889712
WTC11_00007272	chr1	-	593	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-596	-5	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_5	193.392864397837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATTTGTTTCAGTTTT	-53945568	True	NA	-14	True	ATTAAA	-9	NA	53946295	53921566	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
WTC11_00007273	chr1	-	1911	7	FSM	ENSG00000116209.12	ENST00000371348.5	1911	7	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	117.905918238041	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTATCTGATTTTTCT	-54037257	False	NA	0	True	ATTAAA	-29	NA	54048013	54031662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266
WTC11_00007274	chr1	-	987	8	NNC	ENSG00000116209.12	novel	1116	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	217	junction_3	289.186896702617	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACTGTATTTGCTAT	-54042670	True	NA	-20	True	AATAAA	-14	NA	54053426	54032019	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54032306_54036609_54036719_54040755_54040841_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
WTC11_00007276	chr1	-	1380	9	NIC	ENSG00000215883.11	novel	2642	8	NA	NA	0	985	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	21.1626882744135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTGGAATCAGAAGAC	-54198557	True	NA	NA	False	NA	NA	NA	54200010	54174559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_54174823_54179148_54179353_54184160_54184266_54186180_54186287_54187651_54187740_54190737_54190897_54195418_54195716_54196368_54196492_54199975
WTC11_00007278	chr1	-	625	9	FSM	ENSG00000157216.16	ENST00000525990.1	701	9	76	0	63	0	multi-exon	FALSE	canonical	1	2	junction_8	65.9559512098795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGGCAAAAACGACCC	-54413390	False	NA	NA	False	NA	NA	NA	54413403	54243236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54413355
WTC11_00007280	chr1	-	4076	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-111	27742	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAGGCATCTAAATTA	-54836451	False	NA	NA	False	AAAAAG	-2	NA	54887007	54821884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821917_54849627_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00007281	chr1	-	12858	68	NNC	ENSG00000162402.14	novel	10800	68	NA	NA	-2061	0	at_least_one_novel_splicesite	TRUE	canonical	3	34	junction_67	37.0608585966354	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTCTTGCCGCCATT	NA	False	NA	-1	True	AATAAA	-16	NA	55217425	55066358	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_55069108_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456_55075524_55077234_55077301_55078537_55078652_55079537_55079660_55081321_55081425_55083271_55083365_55083771_55083889_55085941_55086039_55089626_55089741_55092022_55092127_55092820_55092917_55093936_55094088_55095254_55095397_55096497_55096623_55096951_55097173_55097597_55097718_55097942_55098085_55098475_55098559_55099770_55099870_55100838_55100965_55101583_55101704_55103875_55104021_55106145_55106264_55107238_55107431_55110184_55110247_55120595_55120757_55121435_55121507_55123446_55123603_55124468_55124629_55125319_55125549_55125662_55125759_55129476_55129575_55132544_55132701_55134069_55134164_55134327_55134414_55137514_55137689_55137805_55137905_55138607_55138719_55138943_55139011_55141615_55141732_55142741_55142796_55142978_55143120_55144126_55144204_55145997_55146110_55146928_55147061_55147648_55147799_55148462_55148571_55153869_55153918_55154118_55154281_55154370_55154467_55154670_55154779_55156947_55157052_55157255_55157371_55158877_55159037_55159610_55159686_55162198_55162265_55165884_55165951_55166567_55166604_55171555_55171679_55172376_55172521_55176375_55176444_55177966_55178130_55214789
WTC11_00007283	chr1	-	5217	13	NIC	ENSG00000173406.16	novel	5301	15	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	23.2216075144585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTAGCCTGGCTTTATT	-57422502	True	NA	-1	True	AATAAA	-16	NA	57424083	56994779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
WTC11_00007285	chr1	-	666	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	0	1408	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	35.2230984819148	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57422476	True	NA	NA	False	AATAAA	-18	NA	57424057	57144008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
WTC11_00007286	chr1	-	616	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-211	1408	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	45.38232646698	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57424249	False	149	NA	False	AATAAA	-18	NA	57424271	57144008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57424193
WTC11_00007287	chr1	-	1923	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	50.8574908445157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545491	True	NA	1	True	AATAAA	-19	NA	58546720	58480718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546634
WTC11_00007290	chr1	-	1356	4	FSM	ENSG00000226476.7	ENST00000663215.1	1360	4	0	4	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.49443825784929	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCACTAGTTTATGGTA	-60640397	True	NA	NA	False	AATAAA	-12	NA	60640507	60595513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_60596374_60600126_60600271_60640010_60640127_60640271
WTC11_00007291	chr1	-	997	8	NNC	ENSG00000162604.12	novel	1250	7	NA	NA	0	37883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.253996315407	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATCTGCTTAATTGCT	-61721205	True	NA	NA	False	AAAAAG	-3	NA	61725144	61643162	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_61643189_61681046_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723783_61724952
WTC11_00007292	chr1	-	934	6	NIC	ENSG00000162604.12	novel	921	8	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	106.814605742848	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	-61721188	True	NA	-6	True	AATAAA	-16	NA	61725127	61681047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724901
WTC11_00007293	chr1	-	1115	8	NIC	ENSG00000162604.12	novel	921	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_7	137.585001555625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	-61721179	True	NA	-6	True	AATAAA	-16	NA	61725118	61681047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61686791_61686922_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
WTC11_00007297	chr1	-	1215	3	FSM	ENSG00000230798.6	ENST00000688951.1	1260	3	39	6	18	0	multi-exon	FALSE	canonical	0	0	junction_1	797.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319572	True	NA	-43	True	AATAAA	-24	NA	63322435	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321624
WTC11_00007298	chr1	-	618	4	FSM	ENSG00000230798.6	ENST00000689015.1	652	4	28	6	18	0	multi-exon	FALSE	canonical	0	0	junction_1	140.005555445331	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319572	True	NA	-43	True	AATAAA	-24	NA	63322435	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321850_63321945_63322315
WTC11_00007299	chr1	-	529	3	NIC	ENSG00000230798.6	novel	837	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	250.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321362_63321464_63322315
WTC11_00007300	chr1	-	450	3	NNC	ENSG00000230798.6	novel	491	3	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63324362	True	NA	-43	True	AATAAA	-24	NA	63324701	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63321191_63321366_63321464_63324655
WTC11_00007302	chr1	-	4930	25	FSM	ENSG00000162434.13	ENST00000673254.1	4930	25	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_19	30.816408643232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTTTATACAAATAAATAT	-64964786	True	NA	-38	True	NA	NA	NA	64966552	64833261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867077_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
WTC11_00007303	chr1	-	2701	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	15	0	-15	multi-exon	FALSE	canonical	1	7	junction_4	3.23207069720567	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGCTAAAACTCATACAC	-68232299	True	NA	NA	False	AATAAA	-38	NA	68232523	68125374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
WTC11_00007304	chr1	-	289	1	FSM	ENSG00000229133.1	ENST00000444127.1	582	1	248	45	248	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGGGCAAGGATGTTAA	NA	False	NA	NA	False	NA	NA	NA	68242807	68242518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68242500_68242800
WTC11_00007305	chr1	-	3597	11	NIC	ENSG00000024526.17	novel	5299	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	31	junction_10	67.3323102232502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCTCAATGTAATTT	-68491482	True	NA	0	True	AATAAA	-23	NA	68497068	68475573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
WTC11_00007306	chr1	-	2699	16	NNC	ENSG00000066557.6	novel	2843	15	NA	NA	165	12347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1804368321324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	-70199591	False	NA	NA	False	NA	NA	NA	70205414	70132457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_70132484_70144809_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
WTC11_00007307	chr1	-	6740	7	FSM	ENSG00000172260.15	ENST00000357731.10	12613	7	0	5873	0	1128	multi-exon	FALSE	canonical	1	5	junction_4	3.89087250997625	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCATAATCGCATGTAT	-72282434	True	NA	NA	False	NA	NA	NA	72282539	71401815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71407571_71592816_71592969_71611025_71611147_71698007_71698140_71776171_71776298_71935078_71935312_72282318
WTC11_00007308	chr1	-	524	5	FSM	ENSG00000225087.2	ENST00000666164.1	525	5	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_2	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTATGGGTCTCCT	-72898431	False	NA	NA	False	AATAAA	-20	NA	72898976	72748919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_72749029_72749165_72749277_72766644_72766688_72850749_72850801_72898766
WTC11_00007309	chr1	-	500	5	FSM	ENSG00000225087.2	ENST00000445976.1	499	5	0	-1	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	5.91607978309962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTATGGGTCTCCT	-72898595	True	NA	NA	False	AATAAA	-20	NA	72899140	72748919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_72749029_72749165_72749277_72850749_72850801_72898766_72898884_72899028
WTC11_00007310	chr1	-	296	1	FSM	ENSG00000272864.1	ENST00000608748.1	565	1	263	6	263	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAATTCTTTGCTTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	74699070	74698774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74698800_74699100
WTC11_00007311	chr1	-	8897	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	0	2449	combination_of_known_junctions	FALSE	canonical	3	117	junction_8	37.4484679940587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTTCCATTTATTTT	-77681185	True	NA	0	True	AATAAA	-15	NA	77683374	77559966	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
WTC11_00007312	chr1	-	6384	14	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	2	-2	combination_of_known_junctions	TRUE	canonical	3	19	junction_12	61.777995354812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGAAGTTTGAAGCCT	-77681183	True	NA	-7	True	TATAAA	-17	NA	77683372	77562417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641521_77641656_77683261
WTC11_00007314	chr1	-	4281	24	NIC	ENSG00000077254.14	novel	4502	25	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_2	106.825688803208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753841	True	NA	-4	True	AATAAA	-21	NA	77759730	77695986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77697475_77697862_77697932_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
WTC11_00007315	chr1	-	2599	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	163	15665	0	0	5prime_fragment	FALSE	canonical	3	234	junction_8	62.6921047660708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753800	True	NA	NA	False	AATAAA	-15	NA	77759689	77711651	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
WTC11_00007317	chr1	-	2440	22	NNC	ENSG00000162613.17	novel	6714	20	NA	NA	-345	49025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.359808227336	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTATAGGCTGGCCAT	-77979347	False	NA	NA	False	NA	NA	NA	77979455	77895029	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77895063_77948404_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884_77979060_77979396
WTC11_00007322	chr1	-	636	3	NNC	ENSG00000288822.1	novel	576	2	NA	NA	13	48581	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	54.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTTTTTCTAGTAAAT	-79481565	True	NA	NA	False	AATAAA	-21	NA	79493800	79440062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_79440204_79462541_79462797_79493560
WTC11_00007323	chr1	-	725	4	NNC	ENSG00000288822.1	novel	576	2	NA	NA	10	48579	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	32.8667342798493	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTTTTTCTAGTAA	-79481568	True	NA	NA	False	AATAAA	-19	NA	79493803	79440064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_79440204_79442897_79442986_79462541_79462797_79493560
WTC11_00007324	chr1	-	1135	3	NNC	ENSG00000288822.1	novel	576	2	NA	NA	10	28198	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	51.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAATGGAAGTCACCGA	-79481568	True	NA	-41	True	TTTAAA	-19	NA	79493803	79460445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_79461083_79462541_79462797_79493560
WTC11_00007327	chr1	-	4750	4	Antisense	novelGene_ENSG00000230817.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	10.2740233382816	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGGCTTCATCTTAT	-83263094	True	NA	NA	False	AATAAA	-26	NA	83264054	83017154	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_83019226_83019317_83021429_83232005_83232106_83263586
WTC11_00007328	chr1	-	433	2	Genic_Genomic	ENSG00000271576.1	novel	1601	1	NA	NA	29	-974	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGTTTTTATTAATATA	-84077319	True	NA	1	True	AATAAA	-18	NA	84077902	84077304	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_84077643_84077807
WTC11_00007329	chr1	-	1199	4	FSM	ENSG00000174021.12	ENST00000370645.9	806	4	0	-393	0	391	multi-exon	FALSE	canonical	1	2	junction_3	1645.19347055462	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAATTTTTTACCCTT	-84506531	False	NA	NA	False	TTTAAA	-18	NA	84506581	84497931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84498549_84501825_84501971_84506010_84506302_84506435
WTC11_00007332	chr1	-	947	2	NIC	ENSG00000171517.6	novel	3515	3	NA	NA	10	510	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAATGGTGTTTTTTTC	-84888720	True	NA	-3	True	ATTAAA	-17	NA	84893196	84813405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_84814172_84893015
WTC11_00007333	chr1	-	2844	14	NIC	ENSG00000055732.13	novel	2810	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	6.90767517558266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-85048123	True	NA	1	True	ATTAAA	-17	NA	85048499	85018081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85047574_85047610_85048395
WTC11_00007334	chr1	-	3407	5	NNC	ENSG00000162642.14	novel	3391	4	NA	NA	0	84091	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	177.844559939291	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTAATTGGCATCAAT	-85250196	True	NA	NA	False	NA	NA	NA	85259662	85165861	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_85165893_85249957_85252703_85258523_85258723_85258934_85259062_85259357
WTC11_00007335	chr1	-	6546	4	ISM	ENSG00000122417.15	ENST00000531412.5	534	6	-849	-4122	-849	0	intron_retention	FALSE	canonical	3	13	junction_3	36.1693547388148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86357393	86348736	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_86352985_86354529_86354693_86354773_86354860_86355344
WTC11_00007339	chr1	-	1584	5	FSM	ENSG00000183291.18	ENST00000469566.5	831	5	0	-753	0	31	multi-exon	FALSE	canonical	0	0	junction_4	591.617010827106	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCAAATTGGTCTAATA	-86914404	False	NA	26	True	NA	NA	NA	86914424	86862413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914314
WTC11_00007340	chr1	-	695	1	FSM	ENSG00000272931.1	ENST00000609194.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCATATCTTCTTTT	-89820843	False	265	-16	True	AATAAA	-18	NA	89820868	89820173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89820200_89820900
WTC11_00007342	chr1	-	1074	3	FSM	ENSG00000233593.11	ENST00000659034.2	5247	3	15	4158	2	-96	multi-exon	FALSE	canonical	2	6	junction_1	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCCTGAGTGACACAAG	-90851290	True	NA	NA	False	NA	NA	NA	90851651	90782608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90783424_90789397_90789488_90851482
WTC11_00007345	chr1	-	2444	2	FSM	ENSG00000233593.11	ENST00000670437.1	2467	2	0	23	0	-18	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCATTATTACCACTC	NA	False	NA	NA	False	NA	NA	NA	90836174	90830101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90835825
WTC11_00007346	chr1	-	2976	3	FSM	ENSG00000233593.11	ENST00000443802.2	2996	3	20	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGCATGAGATGGATT	-90851277	True	NA	NA	False	AAGAAA	-13	NA	90851638	90829592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90837549_90837766_90851482
WTC11_00007347	chr1	-	2106	3	FSM	ENSG00000233593.11	ENST00000664774.1	2108	3	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGGCTATTGTACTTA	-90851290	True	NA	NA	False	AGTAAA	-11	NA	90851651	90830417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90837549_90837766_90851540
WTC11_00007350	chr1	-	1902	19	FSM	ENSG00000162669.16	ENST00000430465.1	1928	19	0	26	0	-26	multi-exon	TRUE	canonical	0	0	junction_2	5.5502752684489	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATCAATAAAAAACTTTT	NA	False	NA	NA	False	AAAAAG	-44	NA	91347449	91262211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91262393_91262480_91262593_91266016_91266108_91267744_91267856_91273711_91273816_91274729_91274810_91276627_91276744_91276981_91277063_91313348_91313496_91313956_91314061_91315814_91315973_91316100_91316185_91316390_91316477_91319292_91319391_91322949_91322998_91323092_91323200_91324674_91324767_91343429_91343511_91347428
WTC11_00007351	chr1	-	1699	11	FSM	ENSG00000162669.16	ENST00000488023.1	1699	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	5.65331761004103	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTAACTTCACTAACAA	-91404453	True	NA	NA	False	NA	NA	NA	91404808	91377758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91378184_91378402_91378481_91379062_91379215_91380103_91380237_91380911_91380983_91385186_91385235_91385574_91385835_91394092_91394403_91396292_91396406_91401011_91401110_91404797
WTC11_00007352	chr1	-	2908	17	FSM	ENSG00000069702.11	ENST00000465892.6	2908	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	5.12309415783079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCCGGCCCAACCCAG	-91885675	False	NA	NA	False	NA	NA	NA	91886109	91683728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720228_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
WTC11_00007353	chr1	-	7793	20	FSM	ENSG00000067208.16	ENST00000684568.2	7795	20	1	1	-1	-1	multi-exon	FALSE	canonical	2	4	junction_8	12.3355666666007	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTCCTTCAGCTT	-92782395	True	NA	-1	True	ATTAAA	-19	NA	92785107	92508696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92513971_92563641_92563738_92605306_92605403_92607580_92607728_92624175_92624335_92625793_92625935_92636201_92636337_92662718_92662866_92663419_92663453_92665938_92665993_92677157_92677219_92693801_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
WTC11_00007354	chr1	-	654	7	FSM	ENSG00000067208.16	ENST00000468580.5	654	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	10.5475115548645	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAAGCGTAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	92677177	92607615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92607728_92624175_92624335_92625793_92625935_92636201_92636337_92663419_92663453_92665938_92665993_92677157
WTC11_00007356	chr1	-	2740	1	Genic_Genomic	ENSG00000223745.8	novel	NA	NA	NA	NA	8949	291	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTCAGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	93264634	93261894	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_93261900_93264600
WTC11_00007357	chr1	-	442	5	FSM	ENSG00000223745.8	ENST00000429859.5	418	5	0	-24	0	-1	multi-exon	FALSE	canonical	2	7	junction_1	6.83282518435822	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGATTCGACAACAGTC	-93337377	False	NA	-16	True	AATAAA	-13	NA	93337392	93264651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93264773_93305387_93305471_93324634_93324730_93325768_93325896_93337376
WTC11_00007358	chr1	-	297	3	FSM	ENSG00000223745.8	ENST00000455474.5	299	3	0	2	0	-1	multi-exon	FALSE	canonical	1	1	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGATTCGACAACAGTC	-93337454	False	NA	-16	True	AATAAA	-13	NA	93337469	93264651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93264773_93305387_93305471_93337376
WTC11_00007361	chr1	-	2982	5	FSM	ENSG00000224081.10	ENST00000635408.2	3236	5	216	38	37	2	multi-exon	FALSE	canonical	1	4	junction_1	2.73861278752583	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAGGGGTTAATAA	-94820028	False	NA	NA	False	NA	NA	NA	94820059	94616389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94617072_94622718_94624610_94638436_94638559_94679424_94679608_94819955
WTC11_00007362	chr1	-	438	2	FSM	ENSG00000224081.10	ENST00000414374.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGACTGAATTATCTA	-94820179	False	NA	NA	False	NA	NA	NA	94820210	94679424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94679608_94819955
WTC11_00007363	chr1	-	4111	6	FSM	ENSG00000117598.13	ENST00000370188.7	4139	6	10	18	10	-18	multi-exon	FALSE	canonical	3	12	junction_1	7.78203058333749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAATTGAAAACTGAATT	-99005004	True	NA	-16	True	AATAAA	-10	NA	99005022	98890262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_98893105_98914800_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
WTC11_00007364	chr1	-	4583	1	ISM	ENSG00000156869.14	ENST00000646001.2	6971	17	58079	4	3952	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACGACTATTGTATTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	99708556	99703973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_99704000_99708600
WTC11_00007365	chr1	-	596	2	FSM	ENSG00000228084.2	ENST00000454219.2	726	2	116	14	116	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCTTCCCAGTCTCG	-99969760	False	NA	-17	True	ATTAAA	-3	NA	99969819	99968396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_99968478_99969304
WTC11_00007366	chr1	-	2663	3	FSM	ENSG00000224616.4	ENST00000666916.1	2663	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAGTAACAAAATAGAAA	-100265851	True	NA	NA	False	ATTAAA	-25	NA	100266134	100262804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100265248_100265828_100265918_100266003
WTC11_00007368	chr1	-	3419	6	NNC	ENSG00000162694.14	novel	902	6	NA	NA	-790	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	123.316827724362	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTAAGCAGACTCATG	-100895704	True	NA	-13	True	AATAAA	-29	NA	100895969	100872376	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632_100894787_100895333
WTC11_00007371	chr1	-	325	1	FSM	ENSG00000230932.2	ENST00000415580.2	579	1	374	-120	374	120	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTCACCTCCCTCCGC	NA	False	NA	NA	False	GGGGCT	-27	NA	106081005	106080680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_106080700_106081000
WTC11_00007373	chr1	-	2271	20	FSM	ENSG00000134215.16	ENST00000490388.2	2271	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.27705837184073	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTTGAAGAGAATTCA	-107964298	False	NA	NA	False	NA	NA	NA	107964853	107668962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_107669473_107683487_107683534_107688380_107688407_107704549_107704651_107704959_107705062_107748967_107749078_107749461_107749595_107751116_107751203_107755426_107755514_107757260_107757330_107760783_107760880_107765075_107765176_107766446_107766551_107768440_107768510_107770635_107770729_107772734_107772844_107777230_107777297_107779433_107779493_107874900_107875018_107964665
WTC11_00007374	chr1	-	3500	11	NNC	ENSG00000085491.17	novel	4249	10	NA	NA	0	21098	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.15408612013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAACTGCTAACAAGTG	-108195386	True	NA	NA	False	NA	NA	NA	108200343	108112944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_108112972_108134818_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
WTC11_00007375	chr1	-	3497	11	NNC	ENSG00000085491.17	novel	4249	10	NA	NA	0	21098	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.15408612013	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAACTGCTAACAAGTG	-108195386	True	NA	NA	False	NA	NA	NA	108200343	108112944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_108112972_108134821_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
WTC11_00007376	chr1	-	2027	1	FSM	ENSG00000085491.17	ENST00000569674.1	2357	1	334	-4	-172	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTGTATTCATTTTC	-108200492	False	23	NA	False	TTTAAA	-28	NA	108200515	108198488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108198500_108200500
WTC11_00007379	chr1	-	374	4	FSM	ENSG00000221986.7	ENST00000489706.5	451	4	77	0	77	0	multi-exon	FALSE	canonical	1	2	junction_3	1.69967317119759	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCCTGTATTTG	-109296249	False	NA	NA	False	AATAAA	-18	NA	109296276	109292364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109292465_109294205_109294250_109295110_109295298_109296233
WTC11_00007380	chr1	-	414	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	117	-23236	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAATGGCTGGGTTTTTTT	-110338715	True	NA	0	True	AATACA	-26	NA	110339036	110315495	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110315752_110318764_110318883_110338996
WTC11_00007381	chr1	-	626	1	FSM	ENSG00000237415.2	ENST00000432731.2	865	1	301	-62	301	62	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATGAAAAGG	NA	False	NA	NA	False	AATACA	-23	NA	110848640	110848014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110848000_110848600
WTC11_00007382	chr1	-	772	2	Antisense	novelGene_ENSG00000143119.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCATAAGTGTTAATTT	NA	False	NA	-15	True	AATAAA	-20	NA	110890846	110877034	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_110877686_110890725
WTC11_00007383	chr1	-	5774	1	FSM	ENSG00000261654.1	ENST00000562952.1	5985	1	181	30	181	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCATTAAAAGTTATTG	-110942161	False	NA	NA	False	NA	NA	NA	110942172	110936398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110936400_110942200
WTC11_00007385	chr1	-	1895	10	NNC	ENSG00000156171.15	novel	2098	10	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	75.4644876010491	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTCATAACCATACTCAA	-111136385	True	NA	-18	True	NA	NA	NA	111140090	111117346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120531_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
WTC11_00007386	chr1	-	653	1	FSM	ENSG00000273221.1	ENST00000610049.1	647	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAAATTATATTTGTTC	NA	False	NA	NA	False	AATAAA	-26	NA	111185061	111184408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111184400_111185100
WTC11_00007387	chr1	-	2016	12	FSM	ENSG00000162777.17	ENST00000369752.5	1894	12	-122	0	4	0	multi-exon	FALSE	canonical	2	3	junction_11	5.30865502569325	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGGCTTTTAC	-111204431	True	NA	1	True	AGTAAA	-20	NA	111204531	111187173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111187682_111188130_111188371_111188701_111188787_111189211_111189254_111192139_111192318_111194577_111194727_111195915_111196057_111197175_111197254_111197919_111197990_111198629_111198743_111199622_111199799_111204295
WTC11_00007388	chr1	-	1700	6	ISM	ENSG00000085465.13	ENST00000369732.4	2196	11	4684	-1	0	1	3prime_fragment	FALSE	canonical	1	2	junction_1	4.31740662898458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGAGTTCTCTGAGATT	NA	False	NA	-2	True	AATAAA	-17	NA	111423051	111414317	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_111415345_111416322_111416459_111419609_111419727_111421275_111421462_111421564_111421674_111422926
WTC11_00007390	chr1	-	640	3	FSM	ENSG00000085465.13	ENST00000481495.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCCTGGCTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	111423051	111419609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111419727_111421275_111421674_111422926
WTC11_00007391	chr1	-	4160	14	FSM	ENSG00000007341.19	ENST00000360743.8	4206	14	50	-4	2	0	multi-exon	FALSE	canonical	3	9	junction_2	35.482306616682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTTGTGTAAT	-112615883	True	NA	NA	False	AATAAA	-31	NA	112619139	112523513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112526112_112541950_112542091_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
WTC11_00007392	chr1	-	1669	6	FSM	ENSG00000155366.17	ENST00000369633.6	1295	6	0	-374	0	374	multi-exon	FALSE	canonical	2	12	junction_5	234.405631331673	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAAGGCTTTTGCA	-112705782	False	NA	NA	False	GGGGCT	-27	NA	112707056	112700752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706832
WTC11_00007393	chr1	-	786	3	NNC	ENSG00000215866.9	novel	700	3	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	548	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112821407	True	NA	0	True	AATAAA	-23	NA	112825831	112820169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112820535_112823652_112823755_112825512
WTC11_00007394	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	454.878738420105	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112849718	True	NA	0	True	AATAAA	-23	NA	112849815	112820169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
WTC11_00007395	chr1	-	5455	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	233	-1314	164	1309	multi-exon	FALSE	canonical	3	10	junction_4	536.250582750266	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTGCATGTTTGTAT	-112955786	False	NA	NA	False	ATTAAA	-21	NA	112955830	112910537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
WTC11_00007396	chr1	-	3328	19	NNC	ENSG00000116793.16	novel	3657	19	NA	NA	18	64	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	65.1751912582967	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGAGAAATGTTTTG	-113758242	True	NA	64	True	AAGAAA	-30	NA	113759458	113697137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113699703_113699800_113700192_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
WTC11_00007398	chr1	-	2813	17	NIC	ENSG00000116793.16	novel	2747	15	NA	NA	6	-156	combination_of_known_junctions	FALSE	canonical	3	33	junction_16	54.515909375154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTGCTTCATCATTA	-113758215	False	NA	-6	True	ATTAAA	-20	NA	113759431	113700030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
WTC11_00007399	chr1	-	3582	15	ISM	ENSG00000116793.16	ENST00000393357.6	3244	18	-334	2842	0	-169	5prime_fragment	FALSE	canonical	3	127	junction_3	43.0538343595692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTTTGATATTTAAAT	-113758273	True	NA	-19	True	ATTAAA	-7	NA	113759489	113700043	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658
WTC11_00007401	chr1	-	253	3	FSM	ENSG00000235527.7	ENST00000441071.5	571	3	68	250	8	-206	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACATTTTGGGGACT	-113929240	False	NA	NA	False	NA	NA	NA	113929250	113924249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113924333_113928243_113928389_113929225
WTC11_00007402	chr1	-	617	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	36	junction_4	39.9593543491383	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114032293	False	NA	-16	True	ATTAAA	-24	NA	114032304	114014903	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
WTC11_00007403	chr1	-	2573	9	NNC	ENSG00000134207.17	novel	4424	8	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	143.157037898945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCTCTTGTCATTTTA	-114151388	False	NA	-5	True	ATTAAA	-15	NA	114152911	114089294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114090174_114091872_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
WTC11_00007404	chr1	-	4344	8	NNC	ENSG00000213281.5	novel	4326	7	NA	NA	0	51808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.403983632933	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTAAGGCTATAAGTT	-114701486	True	NA	NA	False	AAAAAG	-1	NA	114716771	114652660	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114652688_114704477_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
WTC11_00007409	chr1	-	2782	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	50	0	intron_retention	FALSE	canonical	3	9	junction_6	27.4631065653946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120399	True	NA	-14	True	AATAAA	-22	NA	117121699	117111059	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
WTC11_00007410	chr1	-	227	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTTGGCAGCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	117778817	117778590	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_117778600_117778800
WTC11_00007411	chr1	-	10471	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-13	1573	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	17.7449331658709	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATTTGCACAGCTGT	-117928375	True	NA	NA	False	NA	NA	NA	117929634	117861911	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
WTC11_00007414	chr1	-	1088	1	FSM	ENSG00000281741.2	ENST00000626088.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGACCGCCCAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	120914238	120913150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120913200_120914200
WTC11_00007415	chr1	-	553	3	FSM	ENSG00000275585.2	ENST00000612313.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCATGTGTAGCAATTT	-121052121	False	NA	NA	False	NA	NA	NA	121052167	120985691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120985867_121037561_121037798_121052025
WTC11_00007416	chr1	-	2282	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	-21	-603	0	12	multi-exon	FALSE	canonical	2	47	junction_1	133.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGAATACTTACCAT	NA	False	NA	NA	False	AATAAA	-32	NA	143971986	143955274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_143956482_143968923_143969002_143970989
WTC11_00007418	chr1	-	279	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGACTTTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	144547720	144547441	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_144547400_144547700
WTC11_00007420	chr1	-	2307	2	FSM	ENSG00000272419.6	ENST00000578899.5	2307	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145168712	145164098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145164639_145166945
WTC11_00007421	chr1	-	750	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	9	-14	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTTCTAAATTTATAAAT	-145215737	False	NA	NA	False	AATAAA	-4	NA	145215863	145164113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145164639_145215638
WTC11_00007423	chr1	-	2275	6	NNC	ENSG00000162825.17	novel	18760	138	NA	NA	105844	-105	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	7.50999334220743	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTCTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	145299723	145290004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145291770_145292380_145292490_145293203_145293377_145294020_145294073_145294781_145294875_145299640
WTC11_00007425	chr1	-	11694	6	FSM	ENSG00000265491.5	ENST00000539368.2	3097	6	-1301	-7296	-1301	-225	multi-exon	FALSE	canonical	3	80	junction_2	6.55438784326958	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGGCAGTTGTAGTCT	NA	False	NA	NA	False	AAAAAG	-36	NA	145775144	145739092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710
WTC11_00007427	chr1	-	2600	8	ISM	ENSG00000271425.9	ENST00000583866.9	13030	90	72785	92	72785	-92	3prime_fragment	FALSE	canonical	0	0	junction_3	9.26481163833769	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	146072019	146064802	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_146066562_146067179_146067289_146068002_146068176_146068771_146068824_146069542_146069716_146070323_146070433_146071146_146071320_146071967
WTC11_00007429	chr1	-	1033	1	FSM	ENSG00000230832.3	ENST00000438469.2	1241	1	130	78	130	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCAGGAGAAGAAACAGA	-147083214	False	NA	NA	False	NA	NA	NA	147083448	147082415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147082400_147083400
WTC11_00007430	chr1	-	4549	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	-255	-1963	34	7	multi-exon	FALSE	canonical	1	2	junction_2	3.33307290649335	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTACTATTTTTGCAA	NA	False	NA	NA	False	AATAAA	-27	NA	147225594	147184297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
WTC11_00007431	chr1	-	1387	5	FSM	ENSG00000131781.13	ENST00000619062.1	1842	5	455	0	136	0	multi-exon	FALSE	canonical	2	8	junction_1	1.87082869338697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAAGCCTATA	-147225048	False	NA	NA	False	AAAAAG	-20	NA	147225173	147208438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894
WTC11_00007433	chr1	-	5010	22	NNC	ENSG00000263956.8	novel	5494	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	17.9751655336945	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	-148151620	True	NA	-6	True	ATTAAA	-16	NA	148152320	148102150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110488_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148135885_148136038_148137710_148137742_148143414_148143687_148151719
WTC11_00007434	chr1	-	4210	4	NNC	ENSG00000263956.8	novel	5423	24	NA	NA	2	-28187	intron_retention	FALSE	canonical	2	4	junction_2	10.4029910228848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-148151620	True	NA	NA	False	NA	NA	NA	148152320	148132769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148136038_148137710_148137810_148143414_148143687_148151749
WTC11_00007435	chr1	-	261	3	FSM	ENSG00000227733.11	ENST00000482381.2	261	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTCTTCCTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	148205752	148196249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148196282_148199994_148200095_148205623
WTC11_00007440	chr1	-	2672	9	NIC	ENSG00000270629.7	novel	10080	66	NA	NA	9077	-105	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	12.507497751349	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148584608	148531489	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_148533249_148533860_148533970_148534683_148534857_148576409_148576462_148577182_148577356_148577982_148578035_148579073_148579238_148583140_148583193_148584470
WTC11_00007441	chr1	-	640	4	ISM	ENSG00000270629.7	ENST00000621070.4	2701	19	3152	56247	947	4419	internal_fragment	FALSE	canonical	3	28	junction_1	7.78888096369861	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAACTGTCCGGCTTCCTG	NA	False	NA	NA	False	AAGAAA	-38	NA	148592738	148589225	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_148589394_148590756_148590969_148591431_148591505_148592551
WTC11_00007442	chr1	-	2314	5	FSM	ENSG00000215861.7	ENST00000663163.1	589	5	-13	-1712	-13	1275	multi-exon	FALSE	canonical	0	0	junction_4	2.04633819296811	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCAGGGATTGCTG	NA	False	NA	NA	False	AATGAA	-28	NA	149240854	149196282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149198172_149198360_149198485_149201013_149201091_149240376_149240488_149240741
WTC11_00007443	chr1	-	1109	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTAACTTTGTCTTC	-149811011	False	NA	NA	False	NA	NA	NA	149811021	149809912	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_149809900_149811000
WTC11_00007444	chr1	-	469	1	FSM	ENSG00000183598.4	ENST00000331491.2	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTTTTCATCAAGAGCAG	-149813683	False	NA	NA	False	NA	NA	NA	149813693	149813224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149813200_149813700
WTC11_00007445	chr1	-	1706	1	FSM	ENSG00000203811.2	ENST00000369158.2	522	1	-92	-1092	-92	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGAGAATTAAGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	149841300	149839594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149839600_149841300
WTC11_00007446	chr1	-	1805	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	11	-1420	0	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGTACATATTCAATCT	NA	False	NA	NA	False	AATAAA	-16	NA	149861148	149859343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149859300_149861100
WTC11_00007447	chr1	-	1573	7	NNC	ENSG00000143368.10	novel	1544	6	NA	NA	0	21341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	550.51904801035	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTAACCAAGTTTTT	-149910942	True	NA	NA	False	AAAAAG	-2	NA	149927803	149901975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149902005_149923316_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
WTC11_00007448	chr1	-	1570	7	NNC	ENSG00000143368.10	novel	1544	6	NA	NA	0	21339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	550.51904801035	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATATGTTAACCAAGTTT	-149910942	True	NA	NA	False	NA	NA	NA	149927803	149901977	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149902004_149923316_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
WTC11_00007449	chr1	-	620	5	FSM	ENSG00000014914.21	ENST00000493562.1	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	9.06917857360853	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGCCCGAACACTGTT	-149933896	False	NA	NA	False	NA	NA	NA	149933907	149931367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149931427_149931943_149932015_149932263_149932331_149933405_149933531_149933609
WTC11_00007451	chr1	-	5412	12	NIC	ENSG00000264522.6	novel	8922	12	NA	NA	2	-3374	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	7.28748502684767	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTATCATGTTT	-150009092	True	NA	77	True	AATGAA	-3	NA	150010724	149941185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_149945066_149947250_149947336_149948968_149949084_149949628_149949779_149950093_149950222_149959683_149959797_149964221_149964350_149965776_149965879_149967293_149967388_149971062_149971252_149977425_149977577_150010447
WTC11_00007452	chr1	-	2265	8	Fusion	ENSG00000289041.1_ENSG00000117362.13	novel	1730	7	NA	NA	-63	0	multi-exon	FALSE	canonical	3	7	junction_7	153.010603874239	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	-150282212	False	NA	-23	True	AATAAA	-12	NA	150282234	150265405	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697_150269330_150282010
WTC11_00007453	chr1	-	299	1	FSM	ENSG00000277452.1	ENST00000580341.2	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGATAAAAATTGGAAAAC	-150566841	False	NA	NA	False	NA	NA	NA	150566860	150566561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150566600_150566900
WTC11_00007454	chr1	-	1578	5	NNC	ENSG00000143420.19	novel	633	5	NA	NA	0	7691	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	506.575265878625	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGTTTGCACCACT	-150591090	True	NA	NA	False	NA	NA	NA	150629559	150614433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_150614839_150622125_150622860_150625641_150625809_150627466_150627593_150629413
WTC11_00007455	chr1	-	4142	6	FSM	ENSG00000197622.13	ENST00000540998.5	3181	6	-241	-720	-117	718	multi-exon	FALSE	canonical	3	9	junction_4	60.310529760565	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAAGTGTAAGCTTTAT	-151059864	False	NA	-8	True	AAAACA	-14	NA	151059890	151050252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
WTC11_00007457	chr1	-	3873	19	FSM	ENSG00000143434.17	ENST00000368914.8	3873	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	11.4202819363697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAGTTCCACATCAGAA	-151145287	True	NA	-18	True	AATAAA	-22	NA	151146631	151131706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151133518_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
WTC11_00007462	chr1	-	3771	13	NNC	ENSG00000143393.17	novel	3983	13	NA	NA	0	6994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.7897560206846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGACAAGGCAGAGAGC	-151327638	False	NA	NA	False	NA	NA	NA	151327657	151284802	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151284830_151292130_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151326171_151326374_151327270
WTC11_00007465	chr1	-	2056	11	FSM	ENSG00000143390.18	ENST00000392746.7	2056	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	98.0898057904082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTTCAAAGTTCCT	-151346783	False	NA	NA	False	AATAAA	-12	NA	151346822	151342246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346421_151346607_151346754
WTC11_00007468	chr1	-	1530	11	FSM	ENSG00000143416.21	ENST00000447402.7	1530	11	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_8	62.581546800954	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	-151371820	True	NA	-5	True	AATAAA	-19	NA	151372700	151364304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369441_151369555_151369712_151369770_151372637
WTC11_00007469	chr1	-	6462	18	NIC	ENSG00000143442.22	novel	6655	19	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	29.2572411407766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGTGTTGAGACTGA	-151459249	False	NA	-4	True	AATAAA	-17	NA	151459463	151402726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151442080_151442206_151459151
WTC11_00007470	chr1	-	3696	14	Fusion	ENSG00000249602.1_ENSG00000182134.17	novel	2217	14	NA	NA	0	1437	multi-exon	FALSE	canonical	3	31	junction_1	78.1384751692478	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGGCCAACTCAGAAT	-151786722	True	NA	-22	True	AATAAA	-14	NA	151790430	151768669	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_151770563_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
WTC11_00007471	chr1	-	3729	14	Fusion	ENSG00000249602.1_ENSG00000182134.17	novel	2217	14	NA	NA	0	1437	multi-exon	FALSE	canonical	3	31	junction_1	89.2712772774399	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGGCCAACTCAGAAT	-151786780	True	NA	-22	True	AATAAA	-14	NA	151790488	151768669	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_151770563_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
WTC11_00007472	chr1	-	2607	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	98.4790849750077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGGCTGTGAGCCTAA	-151786775	True	NA	23	True	AAGAAA	-38	NA	151790483	151773457	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790398
WTC11_00007473	chr1	-	2752	13	NIC	ENSG00000182134.17	novel	2792	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	85.9547684670387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786771	True	NA	-13	True	AATAAA	-14	NA	151790479	151773493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790398
WTC11_00007475	chr1	-	588	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	0	45478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2208.19851160775	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACACTGATGTTGCTT	-152014754	True	NA	NA	False	NA	NA	NA	152037004	151987027	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987053_152032505_152032824_152033647_152033801_152036912
WTC11_00007477	chr1	-	750	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	5	0	3	multi-exon	FALSE	canonical	3	205	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGTTTGAGAGACTC	-153543166	False	1931	-4	True	AATAAA	-20	NA	153545097	153543617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543924_153544653
WTC11_00007478	chr1	-	532	3	FSM	ENSG00000196154.12	ENST00000468373.1	537	3	0	5	0	3	multi-exon	FALSE	canonical	3	4	junction_1	81	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGTTTGAGAGACTC	-153543875	True	NA	-4	True	AATAAA	-20	NA	153545806	153543617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543940_153544653_153544810_153545752
WTC11_00007480	chr1	-	541	2	FSM	ENSG00000196754.13	ENST00000487430.7	752	2	211	0	211	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATTGCTCAGTGATGT	-153563995	False	NA	0	True	AATAAA	-23	NA	153564022	153561339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153561592_153563733
WTC11_00007481	chr1	-	635	4	NNC	ENSG00000189171.15	novel	710	4	NA	NA	-124	38105	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.127363275903	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGTGTGTCCATTAGAT	-153627168	False	NA	NA	False	NA	NA	NA	153627629	153580681	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153580722_153618804_153619039_153626319_153626534_153627482
WTC11_00007482	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153616132	True	NA	3	True	AATAAA	-21	NA	153616325	153614254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
WTC11_00007483	chr1	-	599	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	-20	0	3	multi-exon	FALSE	canonical	2	19	junction_2	191.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGATTTCTTTTC	-153626807	False	NA	-4	True	AATAAA	-37	NA	153627268	153618783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627138
WTC11_00007484	chr1	-	1906	14	FSM	ENSG00000143621.17	ENST00000615950.4	1906	14	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_11	1032.19009418447	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-153616608	True	NA	0	True	AATAAA	-19	NA	153671028	153661787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668577_153669835_153669879_153670170_153670231_153670917
WTC11_00007485	chr1	-	5606	28	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	47.7095407056956	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-153943403	True	NA	-4	True	AGTAAA	-20	NA	153946668	153929500	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153931022_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
WTC11_00007486	chr1	-	5708	28	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_24	33.5170656529816	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-153943429	True	NA	-4	True	AGTAAA	-20	NA	153946694	153929500	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
WTC11_00007489	chr1	-	2343	13	FSM	ENSG00000160741.17	ENST00000461638.6	2343	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	63.3594244502479	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153954979	False	NA	0	True	AATAAA	-15	NA	153954989	153947674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153948330_153948457_153948645_153948833_153948901_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952651_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872
WTC11_00007490	chr1	-	2955	13	NIC	ENSG00000160741.17	novel	2631	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.7402836894798	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958550	False	18768	0	True	AATAAA	-15	NA	153958585	153947674	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
WTC11_00007491	chr1	-	2359	13	NIC	ENSG00000160741.17	novel	2631	14	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	63.9478954566398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958550	False	18768	0	True	AATAAA	-15	NA	153958585	153947674	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
WTC11_00007492	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	50.7851956250496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958577	False	18768	0	True	AATAAA	-15	NA	153958612	153947674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
WTC11_00007494	chr1	-	2123	3	FSM	ENSG00000143545.10	ENST00000462680.5	2123	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	26.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCCTGTTTTGGGTA	-153973726	False	NA	-26	True	ATTAAA	-16	NA	153986246	153981653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153983582_153984720_153984782_153986112
WTC11_00007495	chr1	-	2114	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTTCCTTCC	-154080854	True	NA	NA	False	AAAACA	-3	NA	154183174	154125748	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125786_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00007496	chr1	-	235	3	FSM	ENSG00000160714.10	ENST00000491572.1	235	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACGAAAAAAACGGTGAG	-154551837	False	NA	NA	False	AATACA	-43	NA	154551857	154550952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154551005_154551396_154551493_154551770
WTC11_00007497	chr1	-	1476	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	52	0	49	0	multi-exon	FALSE	canonical	2	4	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-154567569	True	NA	NA	False	NA	NA	NA	154567697	154564854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154566183_154567549
WTC11_00007498	chr1	-	6412	15	FSM	ENSG00000160710.18	ENST00000649749.1	6412	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	228.245850712224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATTCCTCATAAATAA	-154608784	False	NA	42	True	NA	NA	NA	154608797	154582106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154608750
WTC11_00007499	chr1	-	12717	8	FSM	ENSG00000143603.19	ENST00000271915.9	13034	8	0	317	0	-298	multi-exon	FALSE	canonical	2	7	junction_2	3.24509048331444	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCACCATTGGATTTGT	-154870219	True	NA	NA	False	AATGAA	-25	NA	154870281	154697771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154708273_154713463_154713534_154714875_154715004_154725915_154726027_154733002_154733145_154771974_154772394_154822088_154822185_154869031
WTC11_00007501	chr1	-	555	6	NNC	ENSG00000163463.13	novel	523	5	NA	NA	0	45952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	688.556344825897	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGACTATTGGGAGGC	-155156819	True	NA	NA	False	AAAAAG	-14	NA	155173304	155123455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155123488_155169407_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173220
WTC11_00007502	chr1	-	517	1	FSM	ENSG00000179085.8	ENST00000368399.1	517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138024	False	NA	-21	True	ATTAAA	-20	NA	155140407	155139890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155139900_155140400
WTC11_00007503	chr1	-	462	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	24	0	24	0	multi-exon	FALSE	canonical	3	142	junction_1	0	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138188	True	NA	-21	True	ATTAAA	-20	NA	155140571	155139890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155140272_155140490
WTC11_00007505	chr1	-	861	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	-263	0	-263	0	multi-exon	FALSE	canonical	3	68	junction_4	740.438046024109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155173725	False	NA	-15	True	AATAAA	-15	NA	155173738	155169407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
WTC11_00007506	chr1	-	777	3	FSM	ENSG00000169231.13	ENST00000469769.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAGGAGGCCACCAGA	NA	False	NA	NA	False	NA	NA	NA	155197622	155195844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155195900_155195986_155196127_155197040
WTC11_00007507	chr1	-	1850	8	NIC	ENSG00000160766.15	novel	1994	13	NA	NA	1059	171	intron_retention	FALSE	canonical	2	2	junction_7	19.5792476560135	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACATGCGCTGTGTGC	-155217733	False	NA	NA	False	AAAAAG	-39	NA	155217815	155214133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155214474_155214567_155214685_155215053_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217518_155217594_155217776
WTC11_00007508	chr1	-	2376	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	11	0	11	0	multi-exon	FALSE	canonical	1	1	junction_11	21.5061013829614	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155244645	False	NA	NA	False	NA	NA	NA	155244659	155234451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
WTC11_00007509	chr1	-	2611	9	FSM	ENSG00000160767.22	ENST00000350210.6	2379	9	-231	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_8	37.300929948193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGTCACCAGTGAAATT	-155255181	False	NA	-15	True	AATAAA	-31	NA	155255191	155247203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155254652
WTC11_00007511	chr1	-	2124	13	NIC	ENSG00000176444.19	novel	2154	13	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	88.0468230861032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGGAGTTGGAGGTTT	NA	False	NA	-8	True	AATAAA	-24	NA	155273478	155262868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269714_155270807_155270978_155273200
WTC11_00007512	chr1	-	2258	14	NNC	ENSG00000176444.19	novel	2120	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	138.991166549167	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273481	155262873	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155263401_155263572_155263709_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269714_155270807_155270978_155273200
WTC11_00007513	chr1	-	2152	13	NNC	ENSG00000176444.19	novel	2120	13	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	160.204470044447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCTTCATTTGACCCCC	NA	False	NA	-28	True	AATAAA	-4	NA	155273478	155262888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155263401_155263572_155263709_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269714_155270807_155270978_155273200
WTC11_00007514	chr1	-	1847	9	ISM	ENSG00000143627.19	ENST00000392414.7	2479	11	5129	444	5084	-444	3prime_fragment	FALSE	canonical	2	8	junction_4	2.69258240356725	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGATGCCTTGAGTC	NA	False	NA	-29	True	NA	NA	NA	155295872	155290282	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155290679_155291755_155291938_155293176_155293344_155293437_155293591_155294234_155294386_155294481_155294753_155295115_155295303_155295436_155295569_155295664
WTC11_00007515	chr1	-	11407	28	FSM	ENSG00000116539.14	ENST00000677213.1	11457	28	50	0	3	0	multi-exon	FALSE	canonical	1	1	junction_27	2.81968389787767	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAAACTTTTCCTAAC	-155562994	True	NA	-24	True	ATTAAA	-1	NA	155563112	155335286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155563072
WTC11_00007516	chr1	-	446	1	FSM	ENSG00000223503.1	ENST00000427475.1	662	1	-69	285	-69	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGGGTCCTGACACT	NA	False	NA	NA	False	NA	NA	NA	155591331	155590885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155590900_155591300
WTC11_00007517	chr1	-	912	2	NNC	ENSG00000246203.2	novel	2505	9	NA	NA	43715	-803	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCCAACTAAGAGACAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	155616530	155615528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155615675_155615764
WTC11_00007518	chr1	-	7703	32	FSM	ENSG00000116580.20	ENST00000437809.5	7713	32	10	0	10	0	multi-exon	FALSE	canonical	2	7	junction_31	45.608682562403	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCAGCACTTTTAATC	NA	False	NA	NA	False	AATAAA	-19	NA	155859390	155749716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155859303
WTC11_00007521	chr1	-	4347	13	NIC	ENSG00000132680.11	novel	4499	13	NA	NA	0	3	intron_retention	FALSE	canonical	3	32	junction_4	52.684332480244	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTTCTCTGTTTTCT	-155924760	True	NA	-4	True	AATAAA	-17	NA	155934373	155913041	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155915965_155916624_155916710_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
WTC11_00007522	chr1	-	261	1	FSM	ENSG00000207475.1	ENST00000384744.1	137	1	11	-135	11	135	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCACCATCTTGGCTCA	-155920020	False	NA	NA	False	NA	NA	NA	155920034	155919773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155919800_155920000
WTC11_00007523	chr1	-	4194	22	NIC	ENSG00000116584.21	novel	4169	22	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_16	16.3604522887654	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTCTTCCATAATGT	-155975805	True	NA	-13	True	ATTAAA	-18	NA	155978539	155946850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
WTC11_00007525	chr1	-	4592	5	ISM	ENSG00000160781.17	ENST00000492619.5	2029	7	-933	0	-892	0	intron_retention	FALSE	canonical	2	13	junction_1	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTAGAACTGAAGAAGG	-156248969	False	NA	-8	True	AATAAA	-22	NA	156249009	156243414	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781
WTC11_00007526	chr1	-	1916	15	NNC	ENSG00000163468.15	novel	1977	14	NA	NA	0	21362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1019.52521963382	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAGTAAGAAGGCTGCG	-156283710	True	NA	NA	False	AAAAAG	-1	NA	156338206	156287605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156287631_156308967_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
WTC11_00007527	chr1	-	1973	15	NNC	ENSG00000163468.15	novel	1858	15	NA	NA	0	21362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1019.52521963382	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAGTAAGAAGGCTGCG	-156283761	True	NA	NA	False	AAAAAG	-1	NA	156338257	156287605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156287632_156308962_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
WTC11_00007528	chr1	-	557	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	-14	0	7	multi-exon	FALSE	canonical	2	9	junction_1	7	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCCATTGTATTTATC	-156287474	False	NA	7	True	TATAAA	-31	NA	156291550	156290081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156290361_156290976_156291107_156291402
WTC11_00007529	chr1	-	383	2	NIC	ENSG00000198715.13	novel	543	3	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCCATTGTATTTATC	-156287430	False	4076	7	True	TATAAA	-31	NA	156291506	156290081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156290361_156291402
WTC11_00007530	chr1	-	1233	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	-104	-605	-60	7	multi-exon	FALSE	canonical	2	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCCATTGTATTTATC	-156287534	False	NA	7	True	TATAAA	-31	NA	156291610	156290081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156291107_156291402
WTC11_00007533	chr1	-	542	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	1	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATAGTGGTAGTGGAT	-156421498	True	NA	-4	True	AATAAA	-21	NA	156421752	156404257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156421554
WTC11_00007534	chr1	-	691	5	FSM	ENSG00000125462.19	ENST00000310027.9	688	5	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.29725975966321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATAGTGGTAGTGGAT	-156429291	False	NA	-4	True	AATAAA	-21	NA	156429413	156404257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156407841_156407976_156414653_156414754_156426797_156426873_156429375
WTC11_00007535	chr1	-	467	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	6	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATAGTGGTAGTGGAT	-156429301	True	NA	-4	True	AATAAA	-21	NA	156429423	156404257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156426797_156426873_156429375
WTC11_00007536	chr1	-	723	4	FSM	ENSG00000125462.19	ENST00000497824.5	725	4	0	2	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATAGTGGTAGTGGAT	NA	False	NA	-4	True	AATAAA	-21	NA	156429579	156404257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156414653_156414754_156426797_156426873_156429375
WTC11_00007537	chr1	-	3468	12	NNC	ENSG00000116604.19	novel	5912	12	NA	NA	-41	886	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.0552209488976	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGCGCGGTGTCTCA	-156497854	True	NA	NA	False	NA	NA	NA	156500820	156462840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156462866_156466219_156467657_156467992_156468300_156468779_156469021_156475107_156475238_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483431_156500485
WTC11_00007538	chr1	-	5980	38	NNC	ENSG00000183856.11	novel	6013	38	NA	NA	30	0	intron_retention	TRUE	canonical	3	5	junction_21	6.92018569484463	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-156568344	False	NA	-18	True	AATAAA	-18	NA	156572535	156525404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548485_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
WTC11_00007539	chr1	-	331	1	FSM	ENSG00000272971.1	ENST00000609800.1	547	1	211	5	211	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTTCTTAGCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	156615077	156614746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156614700_156615100
WTC11_00007541	chr1	-	914	7	NNC	ENSG00000143314.12	novel	883	6	NA	NA	0	20776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.169992360493	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTTGATATTTCTGAAT	-156736869	True	NA	NA	False	AAAAAG	-2	NA	156741088	156716526	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156716558_156737302_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
WTC11_00007543	chr1	-	7053	38	NIC	ENSG00000132694.19	novel	5788	40	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_19	25.6402885586403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGGTGGTGTGTGTG	-157041066	True	NA	-10	True	AAGAAA	-12	NA	157045785	156934844	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156936059_156936815_156937006_156937248_156937497_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
WTC11_00007544	chr1	-	5269	5	FSM	ENSG00000117036.12	ENST00000368192.9	5282	5	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	2.54950975679639	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGAGAGTTGGTTT	-157135688	True	NA	-11	True	AATAAA	-18	NA	157138382	157121190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157125980_157134111_157134228_157135470_157135709_157136306_157136366_157138315
WTC11_00007545	chr1	-	235	1	FSM	ENSG00000227295.2	ENST00000413990.1	1906	1	1650	21	1650	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCAGGCAGAGTCATG	-158176072	False	NA	NA	False	NA	NA	NA	158176105	158175870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_158175900_158176100
WTC11_00007546	chr1	-	1601	5	FSM	ENSG00000158710.15	ENST00000368096.5	1603	5	0	2	0	2	multi-exon	FALSE	canonical	0	0	junction_4	257.916653204092	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTGTGTCTGGGG	-159918988	False	NA	-3	True	AATAAA	-21	NA	159923717	159918108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159923435
WTC11_00007547	chr1	-	5132	2	FSM	ENSG00000177807.10	ENST00000644903.1	5205	2	0	73	0	-73	multi-exon	FALSE	canonical	2	6	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGATTTGTTTTGTT	-160070127	False	NA	NA	False	AAAAAG	-2	NA	160070160	160037539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160042533_160070021
WTC11_00007548	chr1	-	3857	13	NIC	ENSG00000132716.19	novel	3972	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_12	183.348181216928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250413	True	NA	-34	True	AGTAAA	-17	NA	160262440	160215719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262275
WTC11_00007549	chr1	-	5973	12	NIC	ENSG00000132716.19	novel	2277	14	NA	NA	-49	-3	intron_retention	FALSE	canonical	3	29	junction_5	232.182565671182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCTGCTCTGTGTGGT	-160250571	True	NA	-37	True	AGTAAA	-14	NA	160262598	160215722	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160220458_160222782_160224441_160224550_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
WTC11_00007550	chr1	-	1019	1	FSM	ENSG00000224261.2	ENST00000453374.2	886	1	-18	-115	-18	115	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTGGATGGTAGTTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	160267243	160266224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160266200_160267200
WTC11_00007553	chr1	-	3786	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	-65	50746	intron_retention	FALSE	non_canonical	0	0	junction_1	529.552273151575	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATTCTGGGTTTGGAA	-161021224	False	NA	NA	False	AATAAA	-5	NA	161021240	160944464	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160944507_160996193_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
WTC11_00007556	chr1	-	3416	9	FSM	ENSG00000143217.9	ENST00000368012.4	3458	9	37	5	37	-5	multi-exon	FALSE	canonical	0	0	junction_5	0.661437827766148	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCTGTCTGGCTCCT	NA	False	NA	NA	False	AATAAA	-9	NA	161089521	161071002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161072886_161073224_161073300_161073719_161073796_161074216_161074374_161074610_161074760_161076354_161076476_161077452_161077744_161079589_161079950_161089217
WTC11_00007557	chr1	-	2332	5	FSM	ENSG00000158796.17	ENST00000545495.5	2329	5	0	-3	0	0	multi-exon	FALSE	canonical	3	15	junction_4	133.529959185196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	-161132657	False	NA	-9	True	AATAAA	-20	NA	161132688	161120973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
WTC11_00007559	chr1	-	2106	9	NIC	ENSG00000158850.15	novel	1933	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	150.600827935971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	-161174390	True	NA	-19	True	AATAAA	-15	NA	161177486	161171310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161176911_161177107_161177422
WTC11_00007560	chr1	-	460	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	14	0	10	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGAATCCAGCTCTG	-161223589	False	NA	NA	False	AATAAA	-2	NA	161223628	161222305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
WTC11_00007563	chr1	-	591	6	FSM	ENSG00000143248.13	ENST00000534288.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	129.458873778509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGTGAGGATTACAAGA	-163321159	True	NA	NA	False	NA	NA	NA	163321787	163152649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163152717_163161914_163161977_163168257_163168369_163306232_163306330_163308543_163308632_163321621
WTC11_00007564	chr1	-	2842	6	FSM	ENSG00000232995.7	ENST00000528689.5	566	6	17	-2293	6	2026	multi-exon	FALSE	canonical	0	0	junction_1	5.86515131944607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTACTGTCAGTTTATT	-163321107	True	NA	NA	False	ATTAAA	-21	NA	163321735	163298369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163300692_163305202_163305314_163306232_163306330_163308543_163308632_163319181_163319292_163321621
WTC11_00007566	chr1	-	1160	1	FSM	ENSG00000224837.1	ENST00000443090.1	522	1	-69	-569	-69	569	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCCTGATTTTTTTCA	-168056480	True	NA	NA	False	AATAAA	-43	NA	168056491	168055331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168055300_168056500
WTC11_00007567	chr1	-	1263	3	FSM	ENSG00000143147.15	ENST00000493800.1	1381	3	0	118	0	-118	multi-exon	FALSE	canonical	3	42	junction_2	9	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTGCGTGCTTTATAA	NA	False	NA	NA	False	NA	NA	NA	168104909	168090563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168090669_168096507_168097233_168104476
WTC11_00007568	chr1	-	1653	13	FSM	ENSG00000143156.14	ENST00000525440.5	1678	13	31	-6	31	0	multi-exon	FALSE	canonical	2	2	junction_3	106.171114506515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169367904	False	NA	NA	False	AATAAA	-18	NA	169367915	169132530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169132818_169169446_169169555_169190642_169190706_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
WTC11_00007569	chr1	-	1813	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	66	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.810635289644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGTGTTGTGCCATC	-169427095	True	NA	-6	True	AATAAA	-17	NA	169427396	169394875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
WTC11_00007572	chr1	-	272	1	FSM	ENSG00000230547.1	ENST00000413899.1	637	1	54	311	54	-311	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCACCCAAAAATTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	171271536	171271264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171271300_171271500
WTC11_00007574	chr1	-	1313	1	FSM	ENSG00000230364.1	ENST00000428881.1	1311	1	42	-44	42	44	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAGGCAGTGAGAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	171684396	171683083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171683100_171684400
WTC11_00007575	chr1	-	4952	9	NNC	ENSG00000117533.15	novel	1738	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.2209851728155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCACTTTGGCTTATTC	-171740486	True	NA	NA	False	AATAAA	-22	NA	171742060	171700159	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_171703416_171703435_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
WTC11_00007576	chr1	-	228	1	FSM	ENSG00000230849.2	ENST00000450663.1	1251	1	639	384	639	-384	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGTCACAGTTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	173141711	173141483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173141500_173141700
WTC11_00007577	chr1	-	3268	3	FSM	ENSG00000117586.11	ENST00000281834.4	3492	3	184	40	184	-37	multi-exon	FALSE	canonical	2	5	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTACATGGAAACAAATA	NA	False	NA	NA	False	AATATA	-18	NA	173207147	173183770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173186866_173188520_173188570_173207023
WTC11_00007578	chr1	-	1461	4	FSM	ENSG00000203739.5	ENST00000437190.2	1469	4	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAATTTCTAATTAACT	-173442578	False	NA	NA	False	AATAAA	-9	NA	173442596	173417806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173418623_173440462_173440751_173441918_173442098_173442418
WTC11_00007579	chr1	-	1824	2	FSM	ENSG00000183831.7	ENST00000367712.2	1824	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAATA	-173669604	True	NA	NA	False	NA	NA	NA	173669832	173657625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173659434_173669816
WTC11_00007580	chr1	-	2357	7	FSM	ENSG00000120334.16	ENST00000356198.6	2357	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	37.9209704517171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173823954	False	NA	NA	False	ATTAAA	-19	NA	173824322	173799549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173800520_173802962_173803506_173806438_173806577_173807266_173807519_173811131_173811307_173823925_173824020_173824137
WTC11_00007581	chr1	-	2296	7	NIC	ENSG00000120334.16	novel	2357	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	37.4418066990482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173822575	True	NA	NA	False	ATTAAA	-19	NA	173824335	173799549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_173800520_173802962_173803506_173806438_173806577_173807266_173807519_173811131_173811307_173823925_173824020_173824211
WTC11_00007582	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	90	junction_4	1146.79008105233	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-173805433	True	NA	-36	True	AATAAA	-15	NA	173867989	173863899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00007583	chr1	-	593	12	FSM	ENSG00000234741.9	ENST00000689238.1	607	12	8	6	0	0	multi-exon	FALSE	canonical	3	1906	junction_11	662.536772720286	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00007584	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1906	junction_10	548.456279023223	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805433	True	NA	-37	True	AATAAA	-14	NA	173867989	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00007585	chr1	-	621	3	FSM	ENSG00000234741.9	ENST00000454813.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_1	135.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173864860	False	NA	-38	True	AATAAA	-13	NA	173864871	173863901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864507_173864674
WTC11_00007586	chr1	-	745	10	ISM	ENSG00000234741.9	ENST00000422183.6	778	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_4	528.073951985356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173867032	False	62556	-38	True	AATAAA	-13	NA	173867043	173863901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00007587	chr1	-	575	3	FSM	ENSG00000234741.9	ENST00000434796.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3581	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACTGCCTGATGGAG	-173864890	False	NA	-116	True	NA	NA	NA	173864901	173863979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864305_173864483_173864507_173864674
WTC11_00007589	chr1	-	11297	20	NIC	ENSG00000135870.12	novel	11451	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	4.41729163333838	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTATTTTGTAAATGA	-174018749	True	NA	-14	True	ATTAAA	-19	NA	174022357	173931213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_173938875_173941264_173941381_173943441_173943589_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754_173993136_174022095
WTC11_00007590	chr1	-	223	1	FSM	ENSG00000235869.1	ENST00000441426.1	334	1	96	15	96	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTACCAAGCCTGTGTA	NA	False	NA	NA	False	ACTAAA	-35	NA	174922344	174922121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_174922100_174922300
WTC11_00007591	chr1	-	2804	20	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	74	junction_16	73.0005502199125	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTGGAAAGTTTTTG	-176206005	True	NA	-3	True	AATAAA	-39	NA	176207275	175944829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163826_176163892_176175909_176176008_176184632_176184693_176206571
WTC11_00007592	chr1	-	7395	23	FSM	ENSG00000152092.16	ENST00000361833.7	7138	23	-257	0	4	0	multi-exon	FALSE	canonical	2	9	junction_6	4.01572322973723	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGTGGATGTTGTG	NA	False	NA	-5	True	AATAAA	-20	NA	177164969	176861066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_176864522_176868843_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
WTC11_00007593	chr1	-	3680	22	FSM	ENSG00000152092.16	ENST00000424564.2	3685	22	0	5	0	-5	multi-exon	FALSE	canonical	2	9	junction_5	4.10740164816149	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGACTTCTTGAAATTT	-177164400	True	NA	-6	True	AATAAA	-15	NA	177164683	176868817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
WTC11_00007595	chr1	-	2447	2	FSM	ENSG00000224687.2	ENST00000654141.1	2831	2	0	384	0	-384	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTTTCTCCCATTCT	-178093640	False	NA	NA	False	NA	NA	NA	178093655	178091060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178093413_178093560
WTC11_00007596	chr1	-	10562	7	ISM	ENSG00000143322.21	ENST00000344730.7	6910	13	24349	-4721	744	3	3prime_fragment	FALSE	canonical	2	3	junction_6	4.42216638714053	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGATTGGAGTGTTT	-179118729	True	NA	-8	True	AATAAA	-27	NA	179118740	179099326	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_179108899_179109207_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586
WTC11_00007597	chr1	-	301	1	FSM	ENSG00000236539.3	ENST00000411857.2	9714	1	4595	4818	4595	-4818	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGCCCGGCGGGATTTT	NA	False	NA	NA	False	NA	NA	NA	179452720	179452419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179452400_179452700
WTC11_00007601	chr1	-	2062	4	NNC	ENSG00000162704.16	novel	7266	4	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	376.263501049759	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTCTGACTTTAACA	-183631982	True	NA	-23	True	AATAAA	-21	NA	183635929	183626193	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_183627595_183630460_183630638_183633081_183633153_183635516
WTC11_00007603	chr1	-	1238	1	FSM	ENSG00000271387.1	ENST00000605589.1	952	1	-288	2	-288	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTTGTTTTAATTT	-184386619	False	NA	NA	False	ATTAAA	-13	NA	184386992	184385754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184385800_184387000
WTC11_00007604	chr1	-	610	6	FSM	ENSG00000121486.12	ENST00000487028.1	619	6	9	0	9	0	multi-exon	FALSE	canonical	2	3	junction_5	78.3081094140319	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACTAAATCGGTAAGA	-185157047	False	NA	NA	False	AAAACA	-22	NA	185157063	185143919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156983
WTC11_00007605	chr1	-	376	1	FSM	ENSG00000231084.2	ENST00000413694.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCACTTATGTGGAATA	NA	False	NA	NA	False	NA	NA	NA	185171710	185171334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185171300_185171700
WTC11_00007607	chr1	-	5179	2	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGGTCAGAGTTCAGTC	-185953454	False	NA	NA	False	NA	NA	NA	185953465	185924215	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185924248_185948318
WTC11_00007608	chr1	-	3983	3	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGGTCAGAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	185954116	185924215	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185924248_185948318_185951769_185953615
WTC11_00007609	chr1	-	3797	3	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGGTCAGAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	185954116	185924215	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185924248_185948318_185951583_185953615
WTC11_00007610	chr1	-	369	2	FSM	ENSG00000162670.11	ENST00000445957.2	528	2	159	0	159	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGCGGTTGCTGCTGT	-190474630	False	NA	NA	False	NA	NA	NA	190474642	190454806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_190454941_190474407
WTC11_00007612	chr1	-	5612	5	FSM	ENSG00000023572.10	ENST00000608166.2	5612	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.4710674620516	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTCTGTATTTCA	-193103513	True	NA	0	True	ATTAAA	-14	NA	193105433	193090865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193095250_193095942_193096760_193097583_193097761_193101140_193101205_193105263
WTC11_00007613	chr1	-	5883	27	FSM	ENSG00000162687.19	ENST00000367433.9	5883	27	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	7.13241205870412	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATTTTTTTTTGCCA	-196606578	True	NA	4	True	AATAAA	-28	NA	196608411	196225778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_196228336_196235985_196236071_196258193_196258495_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
WTC11_00007614	chr1	-	6094	30	FSM	ENSG00000162687.19	ENST00000647658.1	6094	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	9.69327457251515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAAATTATTTCTAAT	-196608484	False	NA	-24	True	TTTAAA	-5	NA	196608495	196225806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_196228336_196235985_196236071_196258193_196258495_196259586_196259625_196273467_196273489_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196317173_196317270_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
WTC11_00007615	chr1	-	6533	25	ISM	ENSG00000162687.19	ENST00000367433.9	5883	27	0	29123	0	3187	5prime_fragment	FALSE	canonical	2	9	junction_6	6.17960354715414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTAGGCTTGTCCTT	-196606578	True	NA	-7	True	AATAAA	-34	NA	196608411	196254901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_196258495_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
WTC11_00007616	chr1	-	2933	3	FSM	ENSG00000162702.8	ENST00000367352.3	2933	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	70.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGACAAAAAAAA	-200404908	True	NA	63	True	TTTAAA	-4	NA	200409992	200406729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200409453_200409560_200409724_200409945
WTC11_00007617	chr1	-	2413	2	FSM	ENSG00000116857.17	ENST00000472411.1	2892	2	479	0	479	0	multi-exon	FALSE	canonical	3	1325	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-201137818	False	NA	-6	True	ATTAAA	-17	NA	201145189	201134772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819
WTC11_00007621	chr1	-	1847	3	NNC	ENSG00000174307.7	novel	896	3	NA	NA	-239	26133	intron_retention	FALSE	non_canonical	0	0	junction_1	188.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAAGAGTTCCTTTTG	NA	False	NA	NA	False	AAAAAG	-2	NA	201469476	201438144	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_201438171_201465493_201466179_201468340
WTC11_00007622	chr1	-	3920	3	FSM	ENSG00000163431.13	ENST00000367288.5	3927	3	13	-6	13	6	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTGGTTTTGTT	-201946380	True	NA	NA	False	AATAAA	-19	NA	201946535	201896449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201898399_201899236_201900752_201946079
WTC11_00007623	chr1	-	340	2	Genic_Genomic	ENSG00000236439.4	novel	254	1	NA	NA	0	18158	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTATAATAGACATATT	NA	False	NA	NA	False	TATAAA	-14	NA	202472117	202453705	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_202453724_202471795
WTC11_00007625	chr1	-	287	1	FSM	ENSG00000260021.1	ENST00000564127.1	592	1	65	240	65	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTAAATAATAATCATAAC	NA	False	NA	NA	False	NA	NA	NA	202810764	202810477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202810500_202810800
WTC11_00007626	chr1	-	1465	4	NNC	ENSG00000214796.9	novel	1112	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.3602572604944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCACCACAGTTGTGTGTG	-202858680	True	NA	-80	True	NA	NA	NA	202861608	202852961	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_202853281_202857400_202858165_202858881_202859103_202861447
WTC11_00007627	chr1	-	1954	7	ISM	ENSG00000143845.15	ENST00000367201.7	2431	8	2109	0	96	0	3prime_fragment	FALSE	canonical	3	16	junction_2	61.3097780854644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-204149746	False	NA	-1	True	ATTAAA	-16	NA	204149785	204131061	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702
WTC11_00007628	chr1	-	1603	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-129	0	intron_retention	TRUE	canonical	3	39	junction_2	8.65383665716478	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213682	True	NA	-3	True	ATTAAA	-20	NA	204214117	204198162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
WTC11_00007631	chr1	-	468	1	FSM	ENSG00000280924.1	ENST00000628516.1	1289	1	392	429	392	-429	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGAAAGGTGGCAGTC	-204369219	False	NA	NA	False	NA	NA	NA	204369327	204368859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204368900_204369300
WTC11_00007632	chr1	-	7371	14	Fusion	ENSG00000117222.14_ENSG00000174529.7	novel	4367	14	NA	NA	0	10	multi-exon	FALSE	canonical	2	10	junction_12	24.5593111327173	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTCTGCTCTTCAG	-205118202	True	NA	-8	True	AATAAA	-25	NA	205122015	205083118	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114906_205115857_205115884_205121854
WTC11_00007634	chr1	-	939	4	NIC	ENSG00000186007.10	novel	637	3	NA	NA	-1137	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	3.29983164553722	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTGTCTGGCGTTTTT	-205456245	True	NA	NA	False	ATTAAA	-33	NA	205457091	205381382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_205381857_205420454_205420575_205455916_205456036_205456865
WTC11_00007637	chr1	-	6056	8	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	0	13528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7733373926169	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTCATTCCTTTTTATT	-205742774	True	NA	NA	False	AAAAAG	-3	NA	205750182	205699293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699325_205713192_205718480_205719526_205719674_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
WTC11_00007638	chr1	-	6115	8	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	-56	13528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.8935135260237	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTCATTCCTTTTTATT	-205750228	False	NA	NA	False	AAAAAG	-3	NA	205750238	205699293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699325_205713192_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
WTC11_00007639	chr1	-	5048	12	NNC	ENSG00000133065.11	novel	5017	11	NA	NA	0	89800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9313376083344	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTCATTCCTTTTTATT	-205810316	True	NA	NA	False	AAAAAG	-3	NA	205813198	205699293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699325_205789094_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
WTC11_00007640	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	29.8024747294583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	-205774575	True	NA	NA	False	NA	NA	NA	205775451	205769702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
WTC11_00007641	chr1	-	292	3	FSM	ENSG00000076356.7	ENST00000463510.1	498	3	206	0	206	0	multi-exon	FALSE	canonical	1	1	junction_2	1	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTCAAGGAGAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	208040058	208038906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208038985_208039620_208039768_208039991
WTC11_00007642	chr1	-	463	2	FSM	ENSG00000076356.7	ENST00000460870.1	756	2	0	293	0	-293	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTCTATGAGTTCAG	NA	False	NA	NA	False	AAAAAG	-1	NA	208217014	208210279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208210463_208216734
WTC11_00007645	chr1	-	7915	9	NIC	ENSG00000123684.13	novel	7773	8	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	6.26498204307083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTAACCTTGTTCTT	-211829715	True	NA	-1	True	AATAAA	-16	NA	211830758	211743457	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_211750051_211750960_211751068_211778917_211779045_211783228_211783503_211787631_211787728_211793071_211793191_211829058_211829324_211830182_211830331_211830572
WTC11_00007646	chr1	-	2483	17	ISM	ENSG00000143493.13	ENST00000366992.7	3380	20	3	11126	3	-55	5prime_fragment	FALSE	canonical	3	131	junction_4	12.6910401464971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCTTTCTGTGCCTGTT	-212032903	True	NA	NA	False	NA	NA	NA	212035517	211952481	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
WTC11_00007648	chr1	-	304	1	FSM	ENSG00000225338.1	ENST00000416139.1	468	1	42	122	42	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGACACCAATGTGGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	212309476	212309172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212309200_212309500
WTC11_00007650	chr1	-	15155	7	NNC	ENSG00000117697.15	novel	790	7	NA	NA	0	2901	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	159.597062072653	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAATTTCTACTAAAAA	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212723251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212729794_212730653_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
WTC11_00007651	chr1	-	4440	5	FSM	ENSG00000117697.15	ENST00000366978.5	1344	5	-195	-2901	0	2901	multi-exon	FALSE	canonical	1	2	junction_1	190.255748927595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAATTTCTACTAAAAA	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212723251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212727180_212782371_212782427_212784362_212784494_212787558_212787638_212791529
WTC11_00007652	chr1	-	919	3	NNC	ENSG00000198468.10	novel	942	2	NA	NA	0	27475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACAGAAAAAGAAAACCAA	-212856458	True	NA	NA	False	NA	NA	NA	212858083	212824629	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212824667_212856608_212857173_212857765
WTC11_00007653	chr1	-	1827	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	-42	-1152	0	17	multi-exon	FALSE	canonical	3	15	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCGTGAATATTTTAAATA	-212856500	True	NA	NA	False	AATAAA	-33	NA	212858125	212855451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212856919_212857765
WTC11_00007654	chr1	-	1830	2	FSM	ENSG00000198468.10	ENST00000651970.1	1814	2	1	-17	0	17	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCGTGAATATTTTAAATA	-212856500	True	NA	NA	False	AATAAA	-33	NA	212858125	212855451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212856922_212857765
WTC11_00007655	chr1	-	831	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGCAAAGATTATTTATT	-212914607	False	NA	NA	False	NA	NA	NA	212914647	212913816	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212913800_212914600
WTC11_00007657	chr1	-	4488	9	NNC	ENSG00000174606.14	novel	4690	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	91.3769664631082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGTGCCTGAAGGTT	-213013207	True	NA	NA	False	AATAAA	-13	NA	213015493	212992183	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015438
WTC11_00007658	chr1	-	1856	8	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	89	-30	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	102.813085802562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATGCATCTTCCTTTG	-213015294	False	NA	-21	True	AGTAAA	-19	NA	213015737	212994758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
WTC11_00007659	chr1	-	1393	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	100	14362	59	-5	5prime_fragment	FALSE	canonical	3	76	junction_3	52.8667087011182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATCTGTGGTCCCATAT	-213014419	True	NA	NA	False	AATAAA	-15	NA	213015767	213006543	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
WTC11_00007660	chr1	-	13047	20	NNC	ENSG00000152104.12	novel	13360	19	NA	NA	-253	4	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	13.0394670455132	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCTCTTTTCTGTACT	-214551825	False	NA	0	True	AATAAA	-23	NA	214551855	214348695	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_214350687_214351256_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
WTC11_00007662	chr1	-	5550	2	FSM	ENSG00000152104.12	ENST00000491277.1	5552	2	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATATAGTGTCTTTTT	-214550721	True	NA	NA	False	AATAAA	-17	NA	214551602	214528277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214533408_214551182
WTC11_00007664	chr1	-	5173	7	FSM	ENSG00000196482.18	ENST00000408911.8	5195	7	18	4	5	0	multi-exon	FALSE	canonical	1	1	junction_3	1.59861050777091	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGCTCTTTTGTATTG	-216723245	True	NA	-10	True	ATTAAA	-14	NA	216723411	216503254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_216507184_216519151_216519422_216564218_216564381_216567987_216568099_216650972_216651090_216677075_216677492_216723243
WTC11_00007666	chr1	-	216	1	ISM	ENSG00000276997.4	ENST00000613697.1	319	2	21	18326	2	-3048	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACATCACCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	222504601	222504385	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_222504400_222504600
WTC11_00007667	chr1	-	223	1	FSM	ENSG00000229399.1	ENST00000413568.1	445	1	207	15	207	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGACCTGAAGAAT	-222641584	False	NA	NA	False	NA	NA	NA	222641651	222641428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222641400_222641700
WTC11_00007668	chr1	-	4050	10	FSM	ENSG00000186063.13	ENST00000474863.5	4050	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	131.662025234647	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-222712717	False	NA	-7	True	ATTAAA	-16	NA	222712737	222668012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222711378
WTC11_00007670	chr1	-	2927	9	FSM	ENSG00000143502.16	ENST00000366878.9	2989	9	0	62	0	-41	multi-exon	FALSE	canonical	1	2	junction_4	5.26782687642637	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAGCTTGATCAAGTC	-223363974	True	NA	-72	True	NA	NA	NA	223364176	223220892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
WTC11_00007671	chr1	-	2871	14	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	12	junction_13	14.794049659422	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	-223991508	True	NA	-5	True	NA	NA	NA	223992598	223951393	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223952384_223952443_223954476_223954668_223961167_223961233_223962076_223962274_223964585_223964710_223971573_223971764_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
WTC11_00007672	chr1	-	3446	15	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_7	17.1106840951518	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	-223991508	True	NA	-5	True	NA	NA	NA	223992598	223951393	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223952384_223952443_223952667_223952871_223954476_223954668_223961167_223961233_223962076_223962274_223962474_223963077_223964455_223964540_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
WTC11_00007673	chr1	-	2839	12	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	39	-15	intron_retention	FALSE	canonical	1	1	junction_5	20.0651830354954	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGGTCGGTAATTT	-223991465	True	NA	-20	True	TATAAA	-38	NA	223992555	223951408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223954476_223954668_223955414_223955538_223961167_223961233_223962076_223962274_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992239
WTC11_00007676	chr1	-	669	4	FSM	ENSG00000162923.17	ENST00000479727.1	795	4	0	126	0	-126	multi-exon	FALSE	canonical	3	80	junction_3	8.73053390247253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGATTAGCAGTGCT	-224400986	False	33	NA	False	NA	NA	NA	224401019	224397852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224398227_224398514_224398594_224398888_224399035_224400949
WTC11_00007677	chr1	-	497	2	ISM	ENSG00000233384.3	ENST00000437416.3	3958	4	366	7044	5	-4286	internal_fragment	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGGTGTGCTAG	-224615843	False	NA	NA	False	GATAAA	-15	NA	224615854	224615173	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_224615428_224615611
WTC11_00007678	chr1	-	1568	3	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTAGTGGTCT	-224845487	True	NA	-5	True	AATAAA	-18	NA	224845792	224839970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_224840338_224843637_224844582_224845535
WTC11_00007679	chr1	-	3714	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-42	2	intron_retention	FALSE	canonical	3	93	junction_4	182.543659161309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGCCTTTTTTTTTTCC	-225417010	True	NA	-4	True	AATAAA	-23	NA	225428128	225401499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
WTC11_00007680	chr1	-	8375	15	NNC	ENSG00000154380.18	novel	13168	15	NA	NA	0	4089	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	105.747581629124	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCAGATCACCTGAGGTC	-225640912	True	NA	NA	False	NA	NA	NA	225653142	225491390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
WTC11_00007682	chr1	-	443	3	FSM	ENSG00000272562.2	ENST00000658138.1	1264	3	8	813	8	-813	multi-exon	TRUE	canonical	0	0	junction_2	2.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGTCAATTGTCCT	-226061875	False	NA	NA	False	NA	NA	NA	226061890	226046373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226046591_226060989_226061082_226061756
WTC11_00007683	chr1	-	287	2	FSM	ENSG00000272562.2	ENST00000609423.1	490	2	0	203	0	-203	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCATTTTAGGTAGAG	-226061861	False	NA	NA	False	TTTAAA	-20	NA	226061876	226060914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226061082_226061756
WTC11_00007684	chr1	-	1216	10	ISM	ENSG00000183814.16	ENST00000681046.1	2998	15	11	34212	11	22324	5prime_fragment	FALSE	canonical	3	98	junction_6	19.0483465469536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTAAAGATCTTTCTT	-226307492	True	NA	NA	False	AATAAA	-18	NA	226309153	226265368	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
WTC11_00007686	chr1	-	5430	22	FSM	ENSG00000143799.14	ENST00000678781.1	5430	22	0	0	0	0	multi-exon	FALSE	canonical	3	2138	junction_16	238.098333313215	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATACTCGATTAAAAAT	-226350415	True	NA	-43	True	ATTAAA	-35	NA	226408154	226360726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
WTC11_00007687	chr1	-	6273	8	FSM	ENSG00000143772.11	ENST00000429204.6	6269	8	0	-4	0	4	multi-exon	FALSE	canonical	2	11	junction_4	4.19912527334259	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTGTGATCCTTC	-226739075	True	NA	2	True	AATAAA	-18	NA	226739282	226631685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226634887_226637678_226637751_226639556_226639659_226641920_226642126_226647166_226647381_226648671_226648772_226735526_226737664_226739040
WTC11_00007688	chr1	-	3166	3	FSM	ENSG00000143772.11	ENST00000366784.1	3146	3	0	-20	0	20	multi-exon	FALSE	canonical	1	1	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATAATGTTTTTAT	-226739116	True	NA	NA	False	AATAAA	-36	NA	226739323	226707169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226707916_226735526_226737664_226739040
WTC11_00007690	chr1	-	3995	4	FSM	ENSG00000143816.8	ENST00000272164.6	4005	4	12	-2	12	2	multi-exon	FALSE	canonical	0	0	junction_3	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCTCAGTCTGCTGCCT	-227947548	True	NA	NA	False	AATAAA	-19	NA	227947920	227918653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227922001_227924137_227924401_227925262_227925520_227947792
WTC11_00007691	chr1	-	274	1	FSM	ENSG00000276255.2	ENST00000611237.1	2638	1	1404	960	1404	-960	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGATTTTGGCTCATTA	-228075099	False	NA	NA	False	NA	NA	NA	228075146	228074872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228074900_228075100
WTC11_00007692	chr1	-	812	6	NIC	ENSG00000162910.19	novel	1423	6	NA	NA	0	39	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	270.480609286507	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCTCATCCCCTGAAAG	-228105223	True	NA	40	True	NA	NA	NA	228109290	228106639	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
WTC11_00007693	chr1	-	848	2	FSM	ENSG00000162910.19	ENST00000465268.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108265	False	NA	1	True	NA	NA	NA	228108275	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667
WTC11_00007695	chr1	-	5752	5	FSM	ENSG00000154370.16	ENST00000493030.6	5774	5	22	0	22	0	multi-exon	FALSE	canonical	0	0	junction_4	45.8114341622264	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTGGTGCCTGCTTA	-228405872	False	NA	-1	True	AATAAA	-23	NA	228405882	228393672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065
WTC11_00007697	chr1	-	5726	2	FSM	ENSG00000177788.7	ENST00000660017.1	5952	2	216	10	10	-10	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAATTCTCCTTTAAAA	-229270737	True	NA	-25	True	ATTAAA	-27	NA	229271026	229263952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229269628_229270975
WTC11_00007703	chr1	-	5100	1	FSM	ENSG00000116903.7	ENST00000366645.1	5100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTGATATTAAGATAT	-231336425	True	NA	-40	True	AATAAA	-25	NA	231337852	231332752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231332800_231337900
WTC11_00007707	chr1	-	291	1	FSM	ENSG00000224436.1	ENST00000412876.1	237	1	27	-81	27	81	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATTTTGCCCACTAAT	NA	False	NA	NA	False	NA	NA	NA	232222147	232221856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_232221900_232222100
WTC11_00007710	chr1	-	4589	22	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	3	111921	3	50	5prime_fragment	FALSE	canonical	0	0	junction_1	27.9027303014713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTATGGTTATCATA	-233290026	True	NA	45	True	AATACA	-22	NA	233295722	233095355	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
WTC11_00007711	chr1	-	821	4	FSM	ENSG00000135749.19	ENST00000484347.5	803	4	0	-18	0	18	multi-exon	FALSE	canonical	0	0	junction_1	56.7156650905785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAATACATTTTTATCA	-233160288	True	NA	13	True	AATAAA	-36	NA	233160307	233095387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282
WTC11_00007712	chr1	-	4402	21	NIC	ENSG00000135749.19	novel	7530	34	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_1	31.3880550528382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGATAGGTTTAATGCA	-233290010	True	NA	-5	True	AATAAA	-18	NA	233295706	233095405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262957_233263164_233295325
WTC11_00007716	chr1	-	5895	24	NIC	ENSG00000054267.22	novel	6022	24	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	32.6476289316425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTTGTTTCTAAAAG	-235324081	True	NA	-3	True	AATAAA	-21	NA	235328157	235166898	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235213876_235214027_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
WTC11_00007717	chr1	-	5412	17	FSM	ENSG00000116962.15	ENST00000366595.7	5412	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	34.7167106736799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTATCTTTTCTGA	-236061595	True	NA	-9	True	AATAAA	-20	NA	236065109	235975829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235977989_235978994_235979108_235979821_235979946_235980495_235980654_235981610_235981783_235985378_235985506_235990885_235991059_235993644_235993873_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
WTC11_00007727	chr1	-	7077	20	NIC	ENSG00000143702.16	novel	7059	20	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_16	45.5861183127658	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	NA	False	NA	-9	True	AATAAA	-18	NA	243255269	243124427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142285_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00007730	chr1	-	6727	19	FSM	ENSG00000143702.16	ENST00000366543.5	6727	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	55.8909045362172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	NA	False	NA	-9	True	AATAAA	-18	NA	243255321	243124427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142285_243142464_243156220_243156348_243164283_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00007747	chr1	-	617	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	0	22112	0	17662	5prime_fragment	FALSE	canonical	3	86	junction_1	47.5105251496971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	-247003185	True	NA	NA	False	ATTAAA	-21	NA	247007999	246967660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
WTC11_00007748	chr1	-	638	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	0	22114	0	17662	5prime_fragment	FALSE	canonical	3	86	junction_1	50.0324894443601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	-247003242	True	NA	NA	False	ATTAAA	-21	NA	247008056	246967660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
WTC11_00007749	chr1	-	2974	4	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	0	40106	0	-330	5prime_fragment	FALSE	canonical	3	96	junction_2	51.4220013439989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTTAGACTGTTTGA	-247003242	True	NA	-4	True	AATAAA	-20	NA	247008056	246985652	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246988256_246999347_246999441_246999947_247000075_247007905
WTC11_00007758	chr1	+	900	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8807239	8808139	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_8807200_8808100
WTC11_00007759	chr1	+	275	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9623278	9623553	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_9623300_9623600
WTC11_00007760	chr1	+	681	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATAGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	15489721	15490402	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_15489700_15490400
WTC11_00007761	chr1	+	372	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCAAGATCACAGCAGA	NA	False	NA	NA	False	AATACA	-45	NA	19130490	19130862	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_19130500_19130900
WTC11_00007762	chr1	+	1382	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCTTCTTAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21430688	21432070	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21430700_21432100
WTC11_00007763	chr1	+	275	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAATGCCCTACTCTTG	32436840	False	NA	NA	False	NA	NA	NA	32436850	32437125	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_32436800_32437100
WTC11_00007765	chr1	+	254	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAAGTGTATATTGAGA	NA	False	NA	NA	False	NA	NA	NA	54901302	54901556	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_54901300_54901600
WTC11_00007766	chr1	+	557	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTACCCCCCACCTTA	55024849	False	NA	NA	False	NA	NA	NA	55024907	55025464	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55024900_55025500
WTC11_00007767	chr1	+	292	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTCATACCTGACACATA	55025995	False	NA	NA	False	NA	NA	NA	55026053	55026345	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55026100_55026300
WTC11_00007769	chr1	+	1035	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCATCGCATCCCCTGTG	55026816	False	NA	NA	False	AATATA	-36	NA	55026874	55027909	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55026900_55027900
WTC11_00007770	chr1	+	287	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGATGAGGATGAAATT	NA	False	NA	NA	False	NA	NA	NA	65643896	65644183	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65643900_65644200
WTC11_00007773	chr1	+	7861	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTGAAAAGATACAAAT	NA	False	NA	NA	False	CATAAA	-29	NA	79476325	79484186	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_79476300_79484200
WTC11_00007774	chr1	+	482	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGACACGGAGAAGGGGT	NA	False	NA	NA	False	NA	NA	NA	82071525	82072007	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_82071500_82072000
WTC11_00007776	chr1	+	237	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTCTGATCCAACTGA	NA	False	NA	NA	False	NA	NA	NA	99513284	99513521	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_99513300_99513500
WTC11_00007777	chr1	+	1392	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCATCTTGTCCTCAG	NA	False	NA	NA	False	AAGAAA	-45	NA	113456117	113457509	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_113456100_113457500
WTC11_00007778	chr1	+	308	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACACTTTAAGTGAATG	NA	False	NA	NA	False	NA	NA	NA	115928498	115928806	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_115928500_115928800
WTC11_00007781	chr1	+	2275	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAATCAGACAATTAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	121110482	121112757	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_121110500_121112800
WTC11_00007782	chr1	+	1988	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTTAAACAAATCTCC	NA	False	NA	NA	False	NA	NA	NA	150609574	150611562	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150609600_150611600
WTC11_00007783	chr1	+	273	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCCCGACACTTCAACA	183618544	False	NA	NA	False	NA	NA	NA	183618606	183618879	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183618600_183618900
WTC11_00007787	chr1	+	1528	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	216012164	False	NA	12	True	AATAAA	-22	NA	216012305	216013833	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_216012300_216013800
WTC11_00007789	chr1	+	211	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGGAATAAGAGAAGGA	221973455	False	NA	NA	False	NA	NA	NA	221973596	221973807	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221973600_221973800
WTC11_00007790	chr1	+	216	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGACACTTTAACTAAAG	NA	False	NA	NA	False	NA	NA	NA	228948780	228948996	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_228948800_228949000
WTC11_00007793	chr1	+	747	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTGAAGGAGCCGGGA	232230807	False	NA	NA	False	NA	NA	NA	232230818	232231565	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232230800_232231600
WTC11_00007794	chr1	+	665	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAGAGGAGGAGTCAG	232231806	False	NA	NA	False	NA	NA	NA	232231817	232232482	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232231800_232232500
WTC11_00007800	chr1	+	473	2	FSM	ENSG00000237491.10	ENST00000457084.1	566	2	93	0	26	0	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAAAAACAGAAGAAGT	778536	False	NA	NA	False	CATAAA	-1	NA	778874	782191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_779093_781936
WTC11_00007804	chr1	+	368	3	FSM	ENSG00000187634.13	ENST00000478729.1	318	3	24	-74	24	74	multi-exon	FALSE	canonical	1	1	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGAGGAGGCGGGTGC	940358	True	NA	NA	False	NA	NA	NA	940369	942247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_940463_941143_941307_942135
WTC11_00007805	chr1	+	3204	10	NNC	ENSG00000187961.15	novel	2567	12	NA	NA	0	0	intron_retention	TRUE	canonical	3	30	junction_2	58.3992220479217	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGCATCTCTCTCTGG	959218	True	NA	9	True	AATAAA	-21	NA	960583	965719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_961751_961825_962048_962285_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
WTC11_00007806	chr1	+	2175	11	NNC	ENSG00000187961.15	novel	2567	12	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.8220156863791	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGGCTGAGCATCT	961249	False	NA	1	True	AATAAA	-13	NA	961455	965711	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_961553_961628_961751_961825_962048_962354_962472_962703_962914_963108_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
WTC11_00007807	chr1	+	1555	3	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	107	junction_1	51	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGCATCTCTCTCTGG	963345	False	NA	9	True	AATAAA	-21	NA	963551	965719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_964168_964348_964531_964962
WTC11_00007808	chr1	+	216	3	ISM	ENSG00000215915.10	ENST00000378785.7	3864	12	6185	12987	5960	1274	internal_fragment	FALSE	canonical	3	132	junction_1	42.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGAGTGTCACTAAGC	NA	False	NA	NA	False	NA	NA	NA	1455873	1457176	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1455917_1456224_1456350_1457128
WTC11_00007809	chr1	+	1951	16	Fusion	ENSG00000197785.14_ENSG00000160072.20	novel	4098	16	NA	NA	0	0	multi-exon	FALSE	canonical	3	211	junction_8	130.690201962079	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTAGGATATGCTCC	1464808	True	NA	NA	False	NA	NA	NA	1471764	1534142	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_1472090_1477273_1477351_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
WTC11_00007810	chr1	+	2404	15	NIC	ENSG00000197530.13	novel	3311	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_11	133.100775078625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTCTCGGACGTT	1623712	False	NA	-5	True	TATAAA	-1	NA	1625086	1630589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629033_1629312_1629384_1629567_1629638_1629705_1630291
WTC11_00007813	chr1	+	1564	7	NIC	ENSG00000189409.14	novel	1248	8	NA	NA	0	0	intron_retention	TRUE	canonical	3	54	junction_3	11.1567119807864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGCCAGCAGCGCGTGCT	1631001	True	NA	NA	False	NA	NA	NA	1632162	1634568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1633913_1633988_1634100_1634201_1634329_1634450
WTC11_00007814	chr1	+	1756	1	FSM	ENSG00000269737.2	ENST00000596308.1	1422	1	-311	-23	-311	23	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCGGGCAGATCACGAG	NA	False	NA	NA	False	NA	NA	NA	1671678	1673434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1671700_1673400
WTC11_00007815	chr1	+	1409	6	NIC	ENSG00000215914.4	novel	1017	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_2	10.2449987798926	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGCTGATAAAGCACTT	1699917	False	NA	NA	False	GGGGCT	-3	NA	1699941	1701782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1700073_1700139_1700280_1700346_1701072_1701147_1701259_1701360_1701488_1701607
WTC11_00007817	chr1	+	2091	13	FSM	ENSG00000130762.15	ENST00000378373.5	2211	13	120	0	120	0	multi-exon	FALSE	canonical	3	89	junction_9	16.3681601491025	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	3466114	False	NA	9	True	ATTAAA	-16	NA	3466124	3481113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
WTC11_00007818	chr1	+	1834	11	FSM	ENSG00000078900.15	ENST00000378280.5	2062	11	228	0	193	0	multi-exon	TRUE	canonical	1	1	junction_1	8.74070935336486	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGCTGCCCTAGTGC	3690881	False	NA	NA	False	NA	NA	NA	3690899	3733292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3690945_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3730926_3731066_3731462_3731557_3732746
WTC11_00007819	chr1	+	4892	12	FSM	ENSG00000078900.15	ENST00000378288.8	5120	12	228	0	193	0	multi-exon	FALSE	canonical	1	1	junction_1	7.42789026029654	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTCTCATGACTCAACC	3690881	False	NA	6	True	AATAAA	-17	NA	3690899	3736201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3690945_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
WTC11_00007820	chr1	+	531	1	FSM	ENSG00000272153.1	ENST00000607459.1	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGCTGTGATGCCTGT	3784997	False	NA	NA	False	AATAAA	-22	NA	3785007	3785538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3785000_3785500
WTC11_00007822	chr1	+	471	6	FSM	ENSG00000069424.16	ENST00000666299.1	1552	6	0	1081	0	-1080	multi-exon	FALSE	canonical	2	20	junction_1	6.70522184569608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGCGGGCGAACTATC	6026007	True	NA	NA	False	AAGAAA	-43	NA	6026344	6085282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203
WTC11_00007823	chr1	+	1413	6	FSM	ENSG00000158286.13	ENST00000485539.5	1413	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.44948974278318	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGGCCGCACCACCTAAGG	6208588	False	NA	NA	False	NA	NA	NA	6208617	6210900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6209026_6209114_6209197_6209267_6209540_6209923_6209971_6210222_6210296_6210369
WTC11_00007824	chr1	+	1912	5	NNC	ENSG00000225077.3	novel	1138	5	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3116752039815	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCCTGGGATGCCT	6235884	True	NA	7	True	AATATA	-17	NA	6236150	6239444	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6236267_6237058_6237151_6237244_6237346_6237469_6237849_6238220
WTC11_00007826	chr1	+	1889	5	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-2310	995	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	82.2629169188645	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGAGGTCTAATGTCTC	6241717	True	NA	28	True	AATAAA	-36	NA	6241868	6246573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6241977_6244102_6244242_6244350_6244447_6244547_6244630_6245109
WTC11_00007827	chr1	+	1718	4	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-2278	995	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	87.4541149530554	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGAGGTCTAATGTCTC	6241749	True	NA	28	True	AATAAA	-36	NA	6241900	6246573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6241977_6244350_6244447_6244547_6244630_6245109
WTC11_00007828	chr1	+	428	3	FSM	ENSG00000187017.18	ENST00000632803.1	455	3	27	0	7	0	multi-exon	FALSE	canonical	1	4	junction_1	30.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGGCAGCGCCGCTCCT	6447292	False	NA	NA	False	NA	NA	NA	6447357	6449056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6447460_6448640_6448803_6448892
WTC11_00007831	chr1	+	840	6	FSM	ENSG00000041988.16	ENST00000487819.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	53.5126153350778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGCTTTGGAGCTCTG	6623813	True	NA	NA	False	NA	NA	NA	6625224	6633121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6625293_6628498_6628692_6629642_6629725_6630287_6630354_6632390_6632496_6632795
WTC11_00007832	chr1	+	743	3	FSM	ENSG00000171735.19	ENST00000482934.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGAACGAATGTGTGG	6825081	True	NA	2	True	AATAAA	-2	NA	6825109	6888188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6825211_6886239_6886347_6887653
WTC11_00007833	chr1	+	4965	12	NNC	ENSG00000171735.19	novel	3247	11	NA	NA	-31535	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.29774628521217	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCATACTACGTGTGT	7704690	False	NA	8	True	ATTAAA	-12	NA	7704872	7769696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_7704895_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7738297_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7766458
WTC11_00007835	chr1	+	393	1	FSM	ENSG00000269925.1	ENST00000602406.1	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGCCTGTAGATTGTC	7776370	False	NA	NA	False	AATAAA	-18	NA	7776382	7776775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7776400_7776800
WTC11_00007837	chr1	+	2574	12	ISM	ENSG00000049246.15	ENST00000377532.8	6365	22	59	34204	30	626	intron_retention	FALSE	canonical	3	35	junction_11	5.10064005058383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAATCTTTGTGACCTA	7783777	True	NA	NA	False	AATAAA	-38	NA	7784349	7810973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_7784377_7784653_7785006_7785440_7785587_7786720_7786837_7788044_7788247_7793956_7794009_7798524_7798674_7801112_7801192_7803046_7803154_7803691_7803849_7808892_7808999_7809892
WTC11_00007840	chr1	+	1444	1	FSM	ENSG00000270282.1	ENST00000605785.1	369	1	-585	-490	-585	490	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAACAAGTTCCCGGC	NA	False	NA	NA	False	AATATA	-22	NA	8512067	8513511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_8512100_8513500
WTC11_00007841	chr1	+	4039	12	NIC	ENSG00000188807.13	novel	3815	11	NA	NA	-165	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	39.9327947829044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	NA	False	NA	20	True	AAAAAG	-33	NA	9588745	9614877	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9609839_9609912_9610505_9610806_9611014_9611074_9611752_9611891_9612985
WTC11_00007842	chr1	+	5435	24	FSM	ENSG00000171608.17	ENST00000628140.2	5483	24	48	0	48	0	multi-exon	FALSE	canonical	0	0	junction_11	18.4195999825205	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGGACATCCCCTGGG	9651630	True	NA	NA	False	NA	NA	NA	9651779	9729114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9651803_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9717063_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720433_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
WTC11_00007843	chr1	+	5283	24	NNC	ENSG00000171608.17	novel	539	3	NA	NA	1407	-193	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	15.9316830724142	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTTTTATGTTCTT	9689145	True	NA	NA	False	AGTAAA	-19	NA	9689582	9728921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_9689722_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720744_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
WTC11_00007844	chr1	+	200	2	FSM	ENSG00000173614.14	ENST00000492735.1	514	2	0	314	0	-314	multi-exon	FALSE	canonical	3	5	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGCAGTAACCAAAAGT	9942999	True	NA	NA	False	NA	NA	NA	9943487	9972189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9943516_9972017
WTC11_00007845	chr1	+	1227	4	NIC	ENSG00000175279.22	novel	914	5	NA	NA	32	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	119.035942284486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGCTTTTCTGGTTACT	10430784	False	NA	18	True	AATAAA	-10	NA	10430814	10442803	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10431402_10434656_10434691_10440346_10440414_10442264
WTC11_00007846	chr1	+	585	4	FSM	ENSG00000120948.19	ENST00000613864.4	584	4	-1	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	573.841441514989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAATACAGGTGTGAG	10992076	True	NA	NA	False	NA	NA	NA	11012652	11018453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018373
WTC11_00007847	chr1	+	563	5	FSM	ENSG00000120948.19	ENST00000610369.4	563	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	532.351563818498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	11018770	True	NA	3	True	AATAAA	-15	NA	11018852	11024043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11018874_11020428_11020600_11022123_11022251_11023262_11023330_11023866
WTC11_00007849	chr1	+	3530	1	NIC	ENSG00000177674.16	novel	717	4	NA	NA	3752	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGTACGACTGTGTAA	11751221	False	NA	7	True	AATAAA	-13	NA	11751263	11754793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11751300_11754800
WTC11_00007850	chr1	+	1309	1	FSM	ENSG00000285646.2	ENST00000666735.1	1180	1	24	-153	23	153	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11907463	False	NA	NA	False	NA	NA	NA	11908174	11909483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11908200_11909500
WTC11_00007851	chr1	+	4727	20	FSM	ENSG00000116688.18	ENST00000675817.1	4766	20	39	0	10	0	multi-exon	FALSE	canonical	0	0	junction_12	108.065718181037	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980181	False	NA	2	True	AATAAA	-9	NA	11980247	12013500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003757_12003890_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
WTC11_00007855	chr1	+	3583	9	FSM	ENSG00000028137.19	ENST00000492361.1	3583	9	-6	6	-6	2	multi-exon	FALSE	canonical	0	0	junction_1	2.93417364857638	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCGACCCCTGGCTCTGCC	12166887	True	NA	6	True	AATAAA	-16	NA	12166996	12209222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12167170_12190956_12191086_12191773_12191924_12192430_12192525_12192862_12193099_12193954_12194033_12194583_12194619_12201966_12202172_12206739
WTC11_00007857	chr1	+	1809	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	34	0	23	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	15152530	True	NA	NA	False	NA	NA	NA	15152599	15220339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
WTC11_00007858	chr1	+	1380	2	NIC	ENSG00000171729.14	novel	1971	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGGTGCTGAGTTACT	15153201	True	NA	31	True	AATAAA	-18	NA	15153727	15220478	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15153955_15219325
WTC11_00007859	chr1	+	626	3	FSM	ENSG00000142621.21	ENST00000472131.5	868	3	242	0	-61	0	multi-exon	FALSE	canonical	3	7	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACGATAACTGAAGAAAAAT	NA	False	NA	NA	False	ATTAAA	-28	NA	15327058	15329734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15327143_15328276_15328430_15329345
WTC11_00007861	chr1	+	3852	20	NIC	ENSG00000116786.13	novel	4134	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_16	56.4942573013686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	15684495	False	NA	21	True	AATAAA	-22	NA	15684540	15734769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15721328_15721389_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731949_15732049_15732349_15732530_15732611_15732729_15733796
WTC11_00007864	chr1	+	287	2	ISM	ENSG00000186301.8	ENST00000457982.3	2291	18	4232	25	4232	-25	3prime_fragment	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACAAAACTTGTAAGTAC	16649841	False	NA	-79	True	NA	NA	NA	16649853	16650264	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_16649950_16650073
WTC11_00007865	chr1	+	425	3	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCGCGTTGGGGGCACTT	16973186	False	NA	NA	False	NA	NA	NA	16973207	16974439	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_16973337_16973960_16974051_16974233
WTC11_00007866	chr1	+	4513	27	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	36.364687989097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGTTTTGTTGTGGTT	17538202	True	NA	17	True	AATAAA	-26	NA	17539685	17697874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607798_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
WTC11_00007869	chr1	+	643	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	-127	-61	-127	61	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGAAACCTGTAAGAGAA	NA	False	NA	2	True	AATAAA	-29	NA	19607986	19608629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19608000_19608600
WTC11_00007870	chr1	+	3791	3	FSM	ENSG00000158748.4	ENST00000289753.2	3800	3	-5	14	-5	-14	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCTGAAGGCAGTGGCT	19664784	True	NA	NA	False	AATAAA	-2	NA	19664869	19680952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19666468_19678566_19678726_19678918
WTC11_00007871	chr1	+	484	2	Antisense	novelGene_ENSG00000162542.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCCATTGCACTCAAGAG	NA	False	NA	NA	False	NA	NA	NA	19758571	19764808	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_19759038_19764790
WTC11_00007872	chr1	+	6493	8	NNC	ENSG00000169914.6	novel	6515	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	7.45325569185462	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	19879241	True	NA	NA	False	AATAAA	-19	NA	19882402	19912945	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_19882721_19890384_19890534_19894367_19894481_19897539_19897663_19904266_19904399_19904890_19904988_19906431_19906617_19907569
WTC11_00007873	chr1	+	230	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGGGTAGTAGGCCCG	NA	False	NA	NA	False	NA	NA	NA	21430015	21430245	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21430000_21430200
WTC11_00007874	chr1	+	4004	16	NIC	ENSG00000142794.19	novel	4401	18	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_2	22.4673590397764	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21440017	False	NA	NA	False	ATTAAA	-16	NA	21440044	21484900	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_21440349_21444947_21445220_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00007875	chr1	+	2133	14	FSM	ENSG00000142794.19	ENST00000454000.6	2133	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	26.0427504705437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGAAGCCCAGTCATA	21438271	True	NA	NA	False	AATGAA	-11	NA	21440127	21483467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21440349_21444947_21445220_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00007876	chr1	+	4201	19	NNC	ENSG00000142794.19	novel	4401	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.8188654745077	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438272	True	NA	NA	False	ATTAAA	-16	NA	21440128	21484900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_21440349_21444947_21445220_21465734_21465818_21466086_21466157_21467181_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
WTC11_00007879	chr1	+	614	8	FSM	ENSG00000011009.11	ENST00000420982.5	614	8	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	715.879051465072	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGCTGAGAAGCTCCGG	23769804	True	NA	NA	False	NA	NA	NA	23791186	23794511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23791251_23792656_23792761_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426
WTC11_00007881	chr1	+	329	3	FSM	ENSG00000189266.13	ENST00000471915.5	380	3	51	0	51	0	multi-exon	FALSE	canonical	2	4	junction_1	529.5	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGGTATAACATTC	23959144	False	NA	NA	False	NA	NA	NA	23959159	23961465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23959257_23960928_23961135_23961439
WTC11_00007882	chr1	+	5028	11	NIC	ENSG00000001461.17	novel	5372	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	21.6185105869947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	24414784	True	NA	4	True	ATTAAA	-15	NA	24415795	24472976	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24415905_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
WTC11_00007884	chr1	+	2425	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_1	34.1357583773966	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	24502082	True	NA	NA	False	NA	NA	NA	24502346	24536800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
WTC11_00007885	chr1	+	3667	18	NNC	ENSG00000133226.18	novel	3110	18	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	590.348850008097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTAGTAGTGCTTATG	24615564	True	NA	19	True	AATAAA	-27	NA	24643320	24673277	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661309_24661406_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
WTC11_00007886	chr1	+	760	1	FSM	ENSG00000284657.1	ENST00000641059.1	760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCACGTTTATCTGTA	25239327	False	NA	NA	False	AAGAAA	-15	NA	25239493	25240253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25239500_25240300
WTC11_00007887	chr1	+	1074	9	Fusion	ENSG00000157978.12_ENSG00000225643.1	novel	2914	9	NA	NA	22	33	multi-exon	FALSE	canonical	2	3	junction_8	45.5766867488193	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCCACAAGGACAGGGG	25540967	True	NA	NA	False	CATAAA	-7	NA	25543627	25590389	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_25543787_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25590168
WTC11_00007889	chr1	+	2084	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	11	4	11	0	multi-exon	FALSE	canonical	1	4	junction_1	107.287257190943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCATTTGCTGTGTCC	25820123	True	NA	7	True	ATTAAA	-17	NA	25820203	25832934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
WTC11_00007890	chr1	+	4036	11	FSM	ENSG00000158008.10	ENST00000374280.4	4020	11	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_3	0.9	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTACAGCAGCTGCTC	26021674	True	NA	24	True	AATAAA	-38	NA	26021758	26036464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26023426_26029192_26029287_26029599_26029708_26030475_26030596_26031131_26031265_26031459_26031567_26032395_26032486_26033228_26033316_26033695_26033857_26034835_26035005_26035164
WTC11_00007891	chr1	+	1525	2	FSM	ENSG00000197245.6	ENST00000374268.5	2799	2	-45	1319	-45	-1319	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTGATCTCCACTG	26159003	True	NA	24	True	AATAAA	-37	NA	26159033	26162643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26159127_26161211
WTC11_00007894	chr1	+	1784	6	NIC	ENSG00000142675.18	novel	2535	21	NA	NA	-192	0	intron_retention	FALSE	canonical	3	91	junction_5	13.3056379027839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26185327	False	NA	13	True	AATAAA	-18	NA	26186722	26189884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
WTC11_00007901	chr1	+	1567	8	NNC	ENSG00000117682.17	novel	3338	9	NA	NA	-2	17	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	66.0015460548664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGGGGAGCCCCCC	26432877	False	NA	29	True	AATGAA	-14	NA	26432888	26469243	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_26433009_26438167_26438285_26442334_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
WTC11_00007905	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2946871503895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	26787749	False	NA	-23	True	NA	NA	NA	26788176	26798268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
WTC11_00007906	chr1	+	4960	4	FSM	ENSG00000060642.12	ENST00000431541.6	4960	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	49.7482551341139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACTCAGCTATGCCT	26787749	False	NA	NA	False	NA	NA	NA	26788176	26800642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26788820_26790758_26790894_26794112_26795215_26797562
WTC11_00007907	chr1	+	2311	4	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	10.3708994574027	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	27045059	False	NA	NA	False	AATAAA	-38	NA	27045166	27065581	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_27045316_27058397_27058523_27060013_27060081_27063611
WTC11_00007908	chr1	+	747	1	FSM	ENSG00000225159.1	ENST00000449818.1	867	1	7	113	7	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTCTCTTCCCAAAGTG	NA	False	NA	NA	False	ATTAAA	-29	NA	27206936	27207683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27206900_27207700
WTC11_00007910	chr1	+	411	1	FSM	ENSG00000241547.1	ENST00000486001.1	468	1	28	29	28	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCGTCCACCGCAAA	27322517	False	NA	NA	False	NA	NA	NA	27325356	27325767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27325400_27325800
WTC11_00007911	chr1	+	1920	15	FSM	ENSG00000142765.18	ENST00000318074.9	1900	15	-20	0	-18	0	multi-exon	FALSE	canonical	2	3	junction_5	19.6375317456452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	27341314	True	NA	NA	False	AATAAA	-18	NA	27342001	27353932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349115_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
WTC11_00007914	chr1	+	2691	7	FSM	ENSG00000117751.18	ENST00000373931.8	2651	7	-30	-10	10	6	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAATGTAGTCCCCAG	27828425	True	NA	23	True	AATAAA	-30	NA	27830791	27851682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27831247_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
WTC11_00007915	chr1	+	1611	7	FSM	ENSG00000130768.15	ENST00000549094.1	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	85.8229767214662	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTTGTGTTCCTTT	27930159	False	NA	20	True	AAAACA	-19	NA	27935109	27959151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27954353_27954527_27955683_27955865_27955948_27956083_27958475
WTC11_00007917	chr1	+	843	3	FSM	ENSG00000130772.14	ENST00000479574.5	862	3	19	0	19	0	multi-exon	FALSE	canonical	1	10	junction_1	26	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATGTTTGCTTTTTTT	28326176	True	NA	NA	False	NA	NA	NA	28329020	28335016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28329125_28330596_28330736_28334416
WTC11_00007919	chr1	+	2081	11	ISM	ENSG00000204138.13	ENST00000632421.1	3375	15	42	8283	8	-7894	5prime_fragment	FALSE	canonical	2	3	junction_2	35.3021245819568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTTTCTGACTTT	28363517	True	NA	38	True	AATAAA	-15	NA	28369751	28489262	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_28369826_28407409_28407464_28432930_28433047_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169
WTC11_00007920	chr1	+	447	4	NNC	ENSG00000242125.3	novel	2201	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	56	junction_3	396.535832765044	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTGTGGTTCATTTTT	28462254	True	NA	13	True	AATAAA	-9	NA	28506042	28509632	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_28506085_28508127_28508161_28508829_28508906_28509336
WTC11_00007921	chr1	+	477	6	FSM	ENSG00000180098.9	ENST00000495215.5	483	6	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	87.4263118288768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGAGCCCTGACGGAGT	28553242	False	NA	NA	False	NA	NA	NA	28553252	28567332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28553308_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293
WTC11_00007922	chr1	+	4720	11	NNC	ENSG00000162419.13	novel	1912	10	NA	NA	-37	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	22.4908870434227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACTTCATATGAAGGT	28666431	True	NA	9	True	AATAAA	-20	NA	28668740	28719351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072_28715760_28717468
WTC11_00007923	chr1	+	2646	18	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	0	-171	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	59.9361829011595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTAACCTGCCATAGT	28908169	True	NA	NA	False	NA	NA	NA	28914561	29116877	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29060421_29060485_29064981_29065159_29109335_29109438_29112367_29112449_29115698_29115804_29116818
WTC11_00007925	chr1	+	4706	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	43.2187387020954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	29259403	True	NA	18	True	AATAAA	-19	NA	29260152	29326800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
WTC11_00007927	chr1	+	5281	9	NIC	ENSG00000084652.16	novel	5012	10	NA	NA	29	0	intron_retention	FALSE	canonical	1	10	junction_2	58.2611309107539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168255	True	NA	9	True	AATAAA	-16	NA	32179703	32198285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32180515_32181241_32181578_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
WTC11_00007929	chr1	+	947	2	FSM	ENSG00000183615.6	ENST00000373582.4	947	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTCTCTTGCAGTCGT	32246816	False	NA	5	True	AATAAA	-19	NA	32247221	32248856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32247683_32248370
WTC11_00007930	chr1	+	578	2	FSM	ENSG00000182866.17	ENST00000477031.6	580	2	-120	122	-110	-122	multi-exon	FALSE	canonical	3	194	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCCCACCTACTTTCT	NA	False	NA	NA	False	NA	NA	NA	32274000	32274880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32274435_32274736
WTC11_00007931	chr1	+	618	2	FSM	ENSG00000162526.7	ENST00000574792.1	715	2	0	97	0	-97	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGCCAGCATTCTTG	32352517	False	NA	NA	False	AAAAAG	-39	NA	32352728	32353999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32352803_32353455
WTC11_00007932	chr1	+	755	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	-114	121	-46	-121	multi-exon	FALSE	canonical	3	1668	junction_1	98.3564944474944	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGAGTTTAATTGCATG	32651024	False	NA	NA	False	AATACA	-34	NA	32651095	32668458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
WTC11_00007933	chr1	+	1600	7	NIC	ENSG00000116497.18	novel	706	3	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	3	59	junction_1	84.6692912979015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCCATTGCCGACTTGA	32812732	False	NA	17	True	TTTAAA	-20	NA	32817738	32856184	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32817847_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
WTC11_00007936	chr1	+	449	1	FSM	ENSG00000217644.5	ENST00000401937.3	526	1	-2	79	-2	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCCTGCTGCCCCACT	NA	False	NA	NA	False	NA	NA	NA	32979944	32980393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32979900_32980400
WTC11_00007937	chr1	+	2066	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	-18	0	1	0	multi-exon	TRUE	canonical	0	0	junction_1	1.48660687473185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	33081016	True	NA	9	True	AATAAA	-26	NA	33081148	33120529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
WTC11_00007938	chr1	+	321	2	FSM	ENSG00000142920.17	ENST00000497280.1	341	2	20	0	20	0	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGGAGCTGGGAGT	NA	False	NA	NA	False	NA	NA	NA	33093261	33094713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33093417_33094547
WTC11_00007939	chr1	+	271	1	FSM	ENSG00000279179.1	ENST00000624339.1	3448	1	1225	1952	1225	-1952	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGACAGAGCGGGGTCA	NA	False	NA	NA	False	NA	NA	NA	33164075	33164346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33164100_33164300
WTC11_00007940	chr1	+	4817	11	NNC	ENSG00000197056.11	novel	3055	11	NA	NA	-11	556	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	44.6955255031194	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAACCTGCAAAGAAAAGA	35074293	True	NA	NA	False	AATAAA	-37	NA	35079370	35116415	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111807_35111913_35112086_35112131_35112976
WTC11_00007941	chr1	+	7331	30	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	-48	-92	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_1	60.4833287434302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTAAAAGAATTTGAAAT	NA	False	NA	31	True	AATAAA	-42	NA	35268660	35421966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269095_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00007942	chr1	+	6441	27	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	56	-118	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	74.5570350757723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGGGTGAGTTCTTCTT	35263767	True	NA	5	True	AATAAA	-16	NA	35268764	35421940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269090_35325359_35325406_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00007943	chr1	+	6181	26	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	56	-118	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	77.2110251194737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGGGTGAGTTCTTCTT	35263767	True	NA	5	True	AATAAA	-16	NA	35268764	35421940	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35325359_35325406_35370028_35370114_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
WTC11_00007944	chr1	+	537	1	FSM	ENSG00000229994.1	ENST00000434805.1	886	1	212	137	212	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTATGAAAAGAAGCCCAA	NA	False	NA	NA	False	AAGAAA	-28	NA	35350933	35351470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35350900_35351500
WTC11_00007945	chr1	+	3680	7	FSM	ENSG00000020129.16	ENST00000373253.7	3677	7	-3	0	-3	0	multi-exon	FALSE	canonical	1	3	junction_1	101.673770243635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	35557402	False	NA	13	True	AATAAA	-13	NA	35557469	35566772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35557884_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
WTC11_00007948	chr1	+	991	6	ISM	ENSG00000126070.20	ENST00000324350.9	1726	7	27	9817	27	0	5prime_fragment	FALSE	canonical	1	5	junction_1	42.9762725233355	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	35930733	False	NA	9	True	CATAAA	-18	NA	35930744	35973592	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_35930799_35931228_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374
WTC11_00007949	chr1	+	1499	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	3.4569664858009	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	NA	False	NA	2	True	AATAAA	-15	NA	36084084	36088275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
WTC11_00007950	chr1	+	3274	18	NIC	ENSG00000116871.16	novel	3238	18	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	83.1618674259521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	36151747	True	NA	6	True	AATAAA	-7	NA	36156125	36180840	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178445_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
WTC11_00007951	chr1	+	4339	11	NIC	ENSG00000054118.15	novel	4405	12	NA	NA	-26	0	intron_retention	FALSE	canonical	1	43	junction_1	161.001894398793	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178104	True	NA	13	True	AATAAA	-24	NA	36224405	36305357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
WTC11_00007952	chr1	+	4494	13	ISM	ENSG00000054118.15	ENST00000648638.1	3825	14	-27	0	-26	0	intron_retention	FALSE	canonical	1	17	junction_1	184.332805906418	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178104	True	NA	13	True	AATAAA	-24	NA	36224405	36305357	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_36224506_36225411_36225464_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
WTC11_00007954	chr1	+	3306	3	FSM	ENSG00000163879.11	ENST00000467277.1	621	3	-826	-1859	37	148	multi-exon	FALSE	canonical	3	117	junction_1	10	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCTGTAAAAAATGGCAAGA	37559080	False	NA	NA	False	NA	NA	NA	37560574	37567005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37561736_37562080_37562246_37565025
WTC11_00007955	chr1	+	3632	2	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAAGCCTGTTTGGTGGT	38423775	True	NA	8	True	AATAAA	-16	NA	38425433	38430737	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427344
WTC11_00007956	chr1	+	792	3	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTATTGCTCAGACA	38423860	False	NA	-8	True	NA	NA	NA	38425518	38430721	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427344_38427623_38430361
WTC11_00007957	chr1	+	1257	1	FSM	ENSG00000215895.4	ENST00000442006.2	1960	1	767	-64	767	64	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGAGAACTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	38709697	38710954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38709700_38711000
WTC11_00007958	chr1	+	421	2	FSM	ENSG00000228436.4	ENST00000456813.2	501	2	58	22	58	-22	multi-exon	FALSE	canonical	2	2	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAATATGTCACTTC	38859934	False	NA	NA	False	NA	NA	NA	38860082	38876204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38860240_38875940
WTC11_00007959	chr1	+	17630	94	FSM	ENSG00000127603.32	ENST00000361689.7	17665	94	35	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	135.62080637479	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	39081098	False	NA	NA	False	ATTAAA	-21	NA	39081451	39486987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39081544_39084166_39084439_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645_39324735_39327217_39327354_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
WTC11_00007964	chr1	+	2689	3	FSM	ENSG00000127603.32	ENST00000497807.1	2689	3	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	39468597	True	NA	NA	False	ATTAAA	-21	NA	39468642	39486987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39468733_39479797_39480010_39484600
WTC11_00007966	chr1	+	288	1	FSM	ENSG00000261798.1	ENST00000566366.1	1196	1	86	822	86	-822	mono-exon	FALSE	NA	NA	NA	NA	NA	742	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCAGCTTCGCGGGGGA	NA	False	NA	NA	False	NA	NA	NA	39789061	39789349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39789100_39789300
WTC11_00007967	chr1	+	3334	11	FSM	ENSG00000084073.10	ENST00000675937.1	3357	11	23	0	23	0	multi-exon	FALSE	canonical	2	6	junction_7	259.037912283125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTACTTTGTCTTT	NA	False	NA	14	True	ATTAAA	-14	NA	40258063	40294174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40280119_40280313_40281342_40281528_40285924_40286030_40290853_40290998_40292444
WTC11_00007969	chr1	+	2715	6	NNC	ENSG00000187815.10	novel	2796	6	NA	NA	22	-24	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7.98498591107085	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATTCAGCATTATGAAA	40477096	True	NA	3	True	ATTAAA	-20	NA	40477311	40496264	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_40477895_40479015_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
WTC11_00007972	chr1	+	1762	10	NNC	ENSG00000066136.21	novel	1955	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	101.01680583808	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGGCATTTTCTTGA	40689393	True	NA	5	True	ATTAAA	-14	NA	40691708	40771107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_40691868_40738835_40738949_40747537_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
WTC11_00007973	chr1	+	4807	17	FSM	ENSG00000171793.16	ENST00000649864.1	4790	17	-17	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.1644590643232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAGAACAAGAGACATGC	40972561	True	NA	NA	False	AATAAA	-7	NA	40979687	41012550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444
WTC11_00007974	chr1	+	1677	8	FSM	ENSG00000171960.12	ENST00000677312.1	1677	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	158.15763255276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGGACTGGCCCCCGT	42659210	False	NA	NA	False	NA	NA	NA	42659227	42676619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675366
WTC11_00007975	chr1	+	1418	1	NIC	ENSG00000274386.6	novel	1294	11	NA	NA	10603	4858	mono-exon	FALSE	NA	NA	NA	NA	NA	2409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGGATGGCTTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	42804267	42805685	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_42804300_42805700
WTC11_00007976	chr1	+	3574	9	FSM	ENSG00000164010.15	ENST00000328249.3	3949	9	369	6	369	-4	multi-exon	FALSE	canonical	2	5	junction_3	2.54950975679639	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTATGCTGT	NA	False	NA	9	True	AATAAA	-10	NA	42830283	42844979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
WTC11_00007978	chr1	+	721	2	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTGGATTGTTTGTT	43119339	True	NA	NA	False	AATAAA	-16	NA	43120003	43120869	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_43120273_43120417
WTC11_00007979	chr1	+	2491	2	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	43119447	True	NA	17	True	NA	NA	NA	43120111	43139651	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_43120273_43137321
WTC11_00007980	chr1	+	506	4	FSM	ENSG00000186973.11	ENST00000410025.5	530	4	0	24	0	-24	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATACTACTTTAAAA	43147903	False	NA	-15	True	NA	NA	NA	43147916	43156372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43148092_43150760_43150821_43152827_43152932_43156205
WTC11_00007981	chr1	+	1173	3	FSM	ENSG00000198198.17	ENST00000638631.1	2574	3	0	1401	0	-1401	multi-exon	FALSE	canonical	3	8	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGCATCATCTCTCCAA	43388822	True	NA	NA	False	NA	NA	NA	43389898	43404550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43389996_43403176_43403303_43403600
WTC11_00007982	chr1	+	8276	57	NIC	ENSG00000198198.17	novel	14136	72	NA	NA	3586	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_6	7.09088233190327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACATTCCCATCGAGAT	NA	False	NA	NA	False	NA	NA	NA	43424342	43450908	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43424433_43424783_43424863_43425112_43425208_43425473_43425643_43425834_43425950_43426037_43426152_43426437_43426539_43426714_43426810_43427055_43427180_43427280_43427446_43427529_43427735_43428002_43428119_43428239_43428487_43429702_43429845_43430010_43430104_43430310_43430390_43430495_43430790_43430948_43431091_43431264_43431373_43431459_43431524_43431715_43431902_43432271_43432440_43432516_43432605_43432727_43432800_43432988_43433191_43434385_43434486_43435199_43435330_43437170_43437324_43437405_43437509_43437594_43437701_43437790_43437903_43438698_43438818_43438928_43439094_43439357_43439443_43439604_43439770_43439880_43440049_43440452_43440587_43441213_43441381_43441503_43441602_43441685_43441819_43441999_43442131_43442267_43442369_43442441_43442619_43442818_43443087_43443187_43443268_43443351_43443478_43443596_43443797_43445893_43445985_43446178_43446260_43446341_43446417_43446954_43447169_43447544_43447699_43447848_43447972_43448078_43448485_43448611_43448729_43450102_43450172_43450336
WTC11_00007983	chr1	+	226	3	FSM	ENSG00000198198.17	ENST00000638642.1	360	3	134	0	134	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGTCCTGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	43431264	43431769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43431373_43431459_43431524_43431715
WTC11_00007985	chr1	+	477	3	FSM	ENSG00000117407.17	ENST00000477048.5	477	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGAGAGGGCGAGGGG	43933646	False	NA	NA	False	NA	NA	NA	43933674	43936231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43933886_43935589_43935717_43936092
WTC11_00007986	chr1	+	1314	4	FSM	ENSG00000117407.17	ENST00000498139.6	1303	4	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.4165045389453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGGCTTGTCAGATC	43932460	True	NA	30	True	NA	NA	NA	43933800	43937240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43933886_43935589_43935717_43936068_43936232_43936301
WTC11_00007987	chr1	+	2801	11	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	28	8983	28	1490	5prime_fragment	FALSE	canonical	3	70	junction_1	16.8166584076623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAATGACCTATAATT	43945318	True	NA	NA	False	NA	NA	NA	43946977	43959039	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745
WTC11_00007988	chr1	+	2901	20	NIC	ENSG00000117408.11	novel	3883	20	NA	NA	28	-15	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	26.9721308923738	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTGGACCCTCACTGC	43945318	True	NA	-4	True	NA	NA	NA	43946977	43967737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43947685_43950085_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
WTC11_00007989	chr1	+	3061	8	NNC	ENSG00000117411.18	novel	2629	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	287.417423811091	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGTACATTGCACAG	43979066	False	NA	-44	True	NA	NA	NA	43979161	43991110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43980244_43980468_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
WTC11_00007991	chr1	+	2159	7	NNC	ENSG00000117411.18	novel	2193	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	225.44357510374	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	43975648	True	NA	14	True	AGTAAA	-14	NA	43979238	43991168	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43979512_43981113_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
WTC11_00007993	chr1	+	1447	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	25	0	11	0	multi-exon	TRUE	canonical	2	8	junction_1	39.323776204734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991491	True	NA	14	True	ATTAAA	-18	NA	43991623	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
WTC11_00007994	chr1	+	1612	7	NNC	ENSG00000159214.13	novel	1659	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	35.9057407975692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991058	True	NA	14	True	ATTAAA	-18	NA	43991801	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43992427_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
WTC11_00007995	chr1	+	1219	7	NNC	ENSG00000159214.13	novel	1659	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	40.9783140480696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991092	True	NA	14	True	ATTAAA	-18	NA	43991835	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43992005_43992319_43992388_43992522_43992640_43993839_43993965_43995600_43995671_43995777_43995857_43995937
WTC11_00007996	chr1	+	1326	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	13	junction_7	35.0335116534941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991094	False	NA	14	True	ATTAAA	-18	NA	43991837	43996528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995941
WTC11_00007997	chr1	+	1334	3	FSM	ENSG00000159214.13	ENST00000472562.1	400	3	-96	-838	-96	290	multi-exon	FALSE	canonical	3	105	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGTGGAGCAGCCCC	43995280	False	NA	NA	False	NA	NA	NA	43995296	43996818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43995671_43995777_43995857_43995937
WTC11_00007998	chr1	+	1686	3	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	-46	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTAAATCTACTTTTT	44402133	True	NA	NA	False	AATAAA	-21	NA	44405147	44419868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44405527_44411980_44412723_44419303
WTC11_00008001	chr1	+	1919	11	NNC	ENSG00000187147.18	novel	1200	10	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_7	184.013043015978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625406	False	NA	NA	False	ATTAAA	-16	NA	44632113	44651723	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645406_44645489_44649660_44649770_44649882_44649958_44650703
WTC11_00008003	chr1	+	2488	14	FSM	ENSG00000173846.13	ENST00000465443.5	2477	14	-11	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	8.70896973505786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	44799797	True	NA	7	True	AATAAA	-14	NA	44800376	44805990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804780_44805265_44805380_44805486
WTC11_00008004	chr1	+	893	7	FSM	ENSG00000126088.14	ENST00000491300.5	884	7	-9	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	456.360846504411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCATGGTGAGGATTGG	45005208	True	NA	NA	False	NA	NA	NA	45012206	45014567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013574_45013792_45013908_45014071_45014438
WTC11_00008005	chr1	+	1852	7	FSM	ENSG00000126088.14	ENST00000494399.5	1848	7	-4	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	373.599904829871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005249	True	NA	15	True	AATAAA	-16	NA	45012247	45015575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012856_45013020_45013135_45013355_45013593_45013792_45013908_45014837_45014939_45015007_45015336
WTC11_00008009	chr1	+	259	1	FSM	ENSG00000281912.1	ENST00000626198.1	1710	1	1395	56	1395	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACGGGCACGCATCT	45305127	False	NA	-53	True	NA	NA	NA	45305304	45305563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45305300_45305600
WTC11_00008010	chr1	+	1450	11	NIC	ENSG00000117448.14	novel	1818	10	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	558.45676645556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATATTGCTTGCTTGT	45538047	True	NA	21	True	AATAAA	-11	NA	45550815	45570043	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
WTC11_00008014	chr1	+	1046	8	FSM	ENSG00000117480.16	ENST00000484697.5	1046	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	87.5097662188254	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGTCTGTGTGGTTTCTG	NA	False	NA	NA	False	AAGAAA	-6	NA	46405722	46413848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46405795_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46412142_46412252_46413122_46413221_46413446
WTC11_00008016	chr1	+	1593	1	FSM	ENSG00000235105.1	ENST00000412769.1	1257	1	-314	-22	-314	22	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATACTTGACACTTTCT	NA	False	NA	NA	False	AAAAAG	-43	NA	48435652	48437245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_48435700_48437200
WTC11_00008017	chr1	+	284	1	FSM	ENSG00000232027.2	ENST00000422197.2	955	1	28	643	28	-643	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATGAACTCAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	51372297	51372581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51372300_51372600
WTC11_00008019	chr1	+	227	1	FSM	ENSG00000224680.4	ENST00000497678.2	568	1	97	244	97	-244	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGACAGGTGCTATGAG	52368757	False	NA	NA	False	NA	NA	NA	52368773	52369000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52368800_52369000
WTC11_00008020	chr1	+	273	1	FSM	ENSG00000230953.2	ENST00000420575.2	175	1	21	-119	21	119	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGTACATTTAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	52920442	52920715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52920400_52920700
WTC11_00008022	chr1	+	677	5	FSM	ENSG00000116221.15	ENST00000490670.1	669	5	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	682.159255599453	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATCAATGTCTTGGA	54180153	True	NA	NA	False	NA	NA	NA	54200195	54210131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54200242_54205017_54205202_54205294_54205411_54207359_54207505_54209945
WTC11_00008023	chr1	+	272	2	FSM	ENSG00000162390.18	ENST00000479837.1	515	2	0	243	0	-243	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCTGGGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	54597263	54599415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54597416_54599295
WTC11_00008024	chr1	+	1694	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	15.0219227552702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGAGTCTTCATTTCAA	59295985	True	NA	12	True	AATAAA	-23	NA	59296812	59762728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
WTC11_00008025	chr1	+	1816	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	16.8897988775014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	59295985	True	NA	14	True	AATAAA	-25	NA	59296812	59762730	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59757930_59757993_59762502
WTC11_00008029	chr1	+	42922	1	FSM	ENSG00000162599.17	ENST00000603233.2	44880	1	1576	382	1313	-382	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAGAAGAAAAGAACCA	61089713	False	NA	NA	False	AAAAAG	-20	NA	61089724	61132646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61089700_61132600
WTC11_00008030	chr1	+	4863	36	FSM	ENSG00000132849.22	ENST00000635214.1	4863	36	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_34	23.2126636795961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTGCTGTGGGAGTTGG	61739043	True	NA	NA	False	AAGAAA	-43	NA	61742476	62114250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62100318_62100409_62108436_62108521_62114052
WTC11_00008031	chr1	+	3223	5	NNC	ENSG00000240563.2	novel	3831	4	NA	NA	-139	30068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	790.503795057304	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGAAGGGTGCAGG	62150750	True	NA	NA	False	AAAAAG	-5	NA	62194709	62242396	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782_62211545_62242359
WTC11_00008033	chr1	+	1896	14	FSM	ENSG00000088035.18	ENST00000648964.1	1887	14	-9	0	-9	0	multi-exon	TRUE	non_canonical	0	0	junction_6	92.1490945224193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTATATGGAGA	63365058	True	NA	-20	True	NA	NA	NA	63367593	63437176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
WTC11_00008035	chr1	+	2106	2	Antisense	novelGene_ENSG00000142856.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGTTTGTCATTTTTA	63572863	True	NA	10	True	AATAAA	-24	NA	63572914	63585377	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_63572954_63583310
WTC11_00008037	chr1	+	305	1	FSM	ENSG00000244256.3	ENST00000489463.3	305	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGGAAAGAA	63655717	False	NA	NA	False	NA	NA	NA	63655742	63656047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63655700_63656000
WTC11_00008040	chr1	+	3998	3	FSM	ENSG00000118473.23	ENST00000683911.1	9236	3	1768	3470	1768	432	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGAATAAGAATTCATGT	NA	False	NA	NA	False	NA	NA	NA	66739334	66745517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66740723_66741271_66741437_66743072
WTC11_00008041	chr1	+	2769	13	NIC	ENSG00000116754.14	novel	3784	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	306.066294107811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70199721	True	NA	10	True	AATAAA	-14	NA	70205684	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
WTC11_00008042	chr1	+	2701	13	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	310.191193280675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209063	True	NA	10	True	AATAAA	-14	NA	70221369	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
WTC11_00008043	chr1	+	2910	12	NIC	ENSG00000116754.14	novel	1717	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_9	322.992848473909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209089	True	NA	10	True	AATAAA	-14	NA	70221395	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364_70250504_70250610
WTC11_00008044	chr1	+	2919	13	NIC	ENSG00000116754.14	novel	2285	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	354.525377167214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	70209176	True	NA	10	True	AATAAA	-14	NA	70221482	70252001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70228556_70231858_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
WTC11_00008045	chr1	+	13116	11	NIC	ENSG00000116754.14	novel	1559	13	NA	NA	15	0	intron_retention	TRUE	canonical	3	34	junction_7	406.515239566735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCATGTTCCTGTA	70209188	True	NA	6	True	AATAAA	-10	NA	70221494	70251997	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70247116_70247150_70249951_70250048_70250364_70250504_70250607
WTC11_00008049	chr1	+	3549	11	ISM	ENSG00000116754.14	ENST00000687381.1	2285	16	26072	-1788	241	0	3prime_fragment	FALSE	canonical	3	258	junction_1	287.408698546164	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70231778	False	NA	20	True	AATAAA	-21	NA	70231788	70253052	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
WTC11_00008050	chr1	+	1060	4	FSM	ENSG00000197568.15	ENST00000486110.2	1095	4	32	3	-14	1	multi-exon	FALSE	canonical	2	2	junction_1	43.8710230866191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTGTTTGGTGGTCTC	70353967	True	NA	14	True	ATTAAA	-19	NA	70354829	70368020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355209_70366145_70366329_70366443_70366538_70367616
WTC11_00008051	chr1	+	7848	12	Fusion	ENSG00000116761.12_ENSG00000271992.1	novel	2090	12	NA	NA	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.3780765254856	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCGTGGTTTAGATTT	70407755	True	NA	5	True	AATAAA	-15	NA	70411267	70445536	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_70411657_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
WTC11_00008052	chr1	+	219	1	FSM	ENSG00000233994.2	ENST00000445131.2	608	1	234	155	234	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGCCTGAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	72274785	72275004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_72274800_72275000
WTC11_00008055	chr1	+	647	1	FSM	ENSG00000162624.15	ENST00000607240.1	2244	1	1563	34	1563	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAAACATTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	75160850	75161497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75160800_75161500
WTC11_00008056	chr1	+	2302	11	FSM	ENSG00000117054.15	ENST00000681730.1	2445	11	143	0	143	0	multi-exon	FALSE	canonical	1	1	junction_1	156.217188554909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAAACTGTGTTATAC	75726901	False	NA	-37	True	NA	NA	NA	75731645	75763720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75731843_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
WTC11_00008057	chr1	+	1470	12	NNC	ENSG00000137955.16	novel	2137	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_2	196.538222051775	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75777565	True	NA	12	True	AATAAA	-26	NA	75786227	75794803	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75786275_75786699_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792196_75792307_75794083_75794234_75794509
WTC11_00008059	chr1	+	2672	1	FSM	ENSG00000272855.1	ENST00000608243.1	463	1	-2159	-50	-2159	50	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAAAGGGGGTGGG	NA	False	NA	NA	False	AGTAAA	-8	NA	76634717	76637389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76634700_76637400
WTC11_00008060	chr1	+	1637	8	ISM	ENSG00000154027.19	ENST00000354567.7	3280	14	-188	142156	-188	-39	5prime_fragment	FALSE	canonical	3	18	junction_6	5.92125193601792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAATATATACAGATAAC	77281820	False	NA	NA	False	TATAAA	-11	NA	77281830	77417810	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638
WTC11_00008061	chr1	+	1904	2	FSM	ENSG00000162614.19	ENST00000470735.1	791	2	89	-1202	89	60	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCATTTTTTCTCACA	NA	False	NA	71	True	ATTAAA	-7	NA	77941799	77943955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77942209_77942460
WTC11_00008062	chr1	+	205	1	FSM	ENSG00000213560.4	ENST00000448345.2	556	1	1	350	1	-350	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATATTTGGTAGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	78091499	78091704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_78091500_78091700
WTC11_00008063	chr1	+	1263	1	Genic_Genomic	ENSG00000227960.1	novel	NA	NA	NA	NA	-811	-746	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGGATGCCAGCAGG	81504263	False	NA	NA	False	NA	NA	NA	81504287	81505550	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_81504300_81505600
WTC11_00008064	chr1	+	5531	21	FSM	ENSG00000117114.21	ENST00000674442.1	5533	21	2	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	117.752484050231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTATTCTTTTTTAAAA	81799918	True	NA	-34	True	NA	NA	NA	81800377	81992180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800480_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81987259_81987342_81990390
WTC11_00008065	chr1	+	5754	21	NNC	ENSG00000117114.21	novel	7432	24	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	99.229771238273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGAACTTTTATGTA	81798698	True	NA	13	True	AATAAA	-22	NA	81800922	81992426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942030_81942046_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
WTC11_00008067	chr1	+	383	2	FSM	ENSG00000122432.18	ENST00000468437.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTTAGTATTTCC	84506308	True	NA	9	True	AATAAA	-24	NA	84506381	84507001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84506419_84506655
WTC11_00008068	chr1	+	384	1	FSM	ENSG00000273264.1	ENST00000610230.1	366	1	-81	63	-81	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTCAAAAAGTGTTAGA	85467193	False	NA	NA	False	NA	NA	NA	85467213	85467597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85467200_85467600
WTC11_00008069	chr1	+	1470	4	NIC	ENSG00000142871.18	novel	2278	5	NA	NA	0	-154	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	354.519706394753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGAGGCAGCTAT	85564433	True	NA	NA	False	AGTAAA	-45	NA	85580760	85583499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_85581048_85581364_85581579_85582415_85582625_85582739
WTC11_00008070	chr1	+	2807	4	FSM	ENSG00000142871.18	ENST00000674818.1	3080	4	-15	288	0	-288	multi-exon	FALSE	canonical	3	696	junction_2	32.6292302493741	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGCTTGAAGCATGAC	85580879	False	NA	NA	False	NA	NA	NA	85580899	85584301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85581579_85581927_85582285_85582415_85582625_85582739
WTC11_00008072	chr1	+	318	1	FSM	ENSG00000241975.1	ENST00000411919.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATATAATTTTAAAAA	88829087	False	NA	NA	False	NA	NA	NA	88829101	88829419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88829100_88829400
WTC11_00008073	chr1	+	475	1	FSM	ENSG00000235308.1	ENST00000450381.1	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGATGGCTGCTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	88923369	88923844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88923400_88923800
WTC11_00008074	chr1	+	757	6	FSM	ENSG00000197147.15	ENST00000449440.5	763	6	6	0	6	0	multi-exon	FALSE	canonical	1	1	junction_2	46.3491100238181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGCCGTCTGTTACG	89522811	True	NA	NA	False	NA	NA	NA	89524841	89582961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89525023_89526961_89526987_89568246_89568308_89568438_89568494_89579590_89579689_89582624
WTC11_00008075	chr1	+	7682	7	NIC	ENSG00000197147.15	novel	8034	9	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	30.5218500968295	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGACTGTACTAATTT	89522837	True	NA	6	True	AATAAA	-18	NA	89524867	89597861	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_89525023_89549914_89549972_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
WTC11_00008076	chr1	+	1640	12	NNC	ENSG00000162664.17	novel	9729	12	NA	NA	10	-797	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_6	67.6125324585209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATGAACCTATTGAAGAA	89989091	True	NA	34	True	AATAGA	-27	NA	89995121	90027429	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013098_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
WTC11_00008077	chr1	+	5975	18	FSM	ENSG00000189195.15	ENST00000636805.2	5999	18	24	0	24	0	multi-exon	FALSE	canonical	2	5	junction_15	3.25608294190542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTAGAGTTTTCTGTG	92080252	False	NA	3	True	AATAAA	-22	NA	92080368	92184723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349_92139431_92141114_92141212_92147179_92147269_92147683_92147787_92166957_92167141_92167847_92167986_92168865_92168996_92171398_92171461_92176828_92177547_92177810_92177899_92178311_92178452_92180264_92182596_92183863
WTC11_00008078	chr1	+	646	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	-17	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	2699.49236709423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	92746576	True	NA	34	True	AATAAA	-17	NA	92832039	92841923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
WTC11_00008080	chr1	+	5059	29	FSM	ENSG00000122483.18	ENST00000690025.1	4752	29	0	-307	0	307	multi-exon	FALSE	canonical	2	21	junction_28	20.5920965123882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATCTGAATCCACTG	93178389	True	NA	8	True	AATAAA	-19	NA	93180723	93279037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93270346_93270815_93278462
WTC11_00008081	chr1	+	541	5	FSM	ENSG00000122483.18	ENST00000479653.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	26.7990205044886	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACAGAGTTTGCAGG	93178424	True	NA	NA	False	NA	NA	NA	93180758	93193660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180853_93183359_93183496_93186344_93186504_93191999_93192107_93193615
WTC11_00008082	chr1	+	4123	28	NIC	ENSG00000122483.18	novel	4552	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_11	19.41072914745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	93178424	True	NA	NA	False	AATAAA	-21	NA	93180758	93278607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214745_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
WTC11_00008083	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.12825877028341	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	94926505	True	NA	5	True	AATAAA	-20	NA	94927411	94963270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
WTC11_00008085	chr1	+	4787	13	FSM	ENSG00000117569.19	ENST00000675080.1	4780	13	-7	0	0	0	multi-exon	TRUE	canonical	3	117	junction_1	33.2924749588986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGATGCTGTGAAAATA	96717259	True	NA	NA	False	CATAAA	-4	NA	96721776	96815029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
WTC11_00008086	chr1	+	3001	13	NIC	ENSG00000117569.19	novel	3321	14	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	49.2245422076788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACAAAGTTGGGAGGTT	96717287	True	NA	4	True	ATTAAA	-10	NA	96721804	96814784	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806865_96806959_96812711_96812929_96813028_96813107_96813275
WTC11_00008087	chr1	+	4617	6	FSM	ENSG00000117600.14	ENST00000457765.6	4846	6	206	23	6	-23	multi-exon	FALSE	canonical	1	1	junction_5	7.4565407529229	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATTAGATTTCTTC	99264197	True	NA	-19	True	GATAAA	-37	NA	99264497	99309557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99264672_99287964_99288151_99296737_99296868_99299034_99299231_99300908_99300967_99305684
WTC11_00008088	chr1	+	320	2	Antisense	novelGene_ENSG00000224445.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATCACCTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	99509880	99512100	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_99510112_99512011
WTC11_00008090	chr1	+	682	4	FSM	ENSG00000162688.17	ENST00000477753.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	3.85861230093008	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAATTTTTAACTTCT	NA	False	NA	NA	False	NA	NA	NA	99874469	99876597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99874811_99875153_99875257_99875357_99875456_99876457
WTC11_00008093	chr1	+	3902	15	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	40	junction_14	14.9748087787185	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103524386	True	NA	NA	False	AATAAA	-21	NA	103525700	103555239	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
WTC11_00008095	chr1	+	2181	12	FSM	ENSG00000240038.7	ENST00000361355.8	2181	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.37758124193128	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGCCAAGTGTGTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	103554699	103579529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_103555110_103565434_103565595_103571556_103571771_103572109_103572257_103573062_103573261_103573707_103573939_103574259_103574394_103575222_103575346_103575440_103575541_103577489_103577609_103577719_103577846_103579310
WTC11_00008097	chr1	+	1496	1	FSM	ENSG00000260879.1	ENST00000564063.1	1566	1	-97	167	-97	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCACATCTTCTGAATC	108199813	False	NA	NA	False	NA	NA	NA	108199828	108201324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108199800_108201300
WTC11_00008098	chr1	+	917	6	FSM	ENSG00000121957.15	ENST00000435987.5	904	6	-13	0	8	0	multi-exon	FALSE	canonical	3	26	junction_1	38.1124651524931	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGGCAACTTCAGGGAT	NA	False	NA	NA	False	NA	NA	NA	108876967	108898724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108877229_108885506_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641
WTC11_00008099	chr1	+	1689	8	FSM	ENSG00000121957.15	ENST00000675829.1	3284	8	8	1587	8	-1587	multi-exon	FALSE	canonical	3	107	junction_1	11.1794271694365	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACCTCTTCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	108876967	108902172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789
WTC11_00008100	chr1	+	2820	16	FSM	ENSG00000121957.15	ENST00000645164.2	2806	16	-14	0	8	0	multi-exon	FALSE	canonical	1	6	junction_2	42.4419080103093	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGTCTTACTAAAAAT	NA	False	NA	-4	True	AAAAAG	-6	NA	108876967	108930382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108877229_108882579_108882626_108885506_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
WTC11_00008102	chr1	+	2623	12	NIC	ENSG00000162650.17	novel	2810	13	NA	NA	2	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.1660442476999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATGAAAATATAAAAACAG	109482604	True	NA	45	True	AAAAAG	-43	NA	109483940	109492758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_109484081_109485331_109485519_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
WTC11_00008103	chr1	+	7485	10	NNC	ENSG00000065135.12	novel	9044	9	NA	NA	0	-560	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	252.048545196759	144	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCCTCTAAGAATATG	109534958	True	NA	NA	False	NA	NA	NA	109548614	109599635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344_109596399_109597397
WTC11_00008104	chr1	+	695	3	FSM	ENSG00000168765.18	ENST00000461767.5	804	3	-24	133	-5	-133	multi-exon	FALSE	canonical	3	145	junction_2	12	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCCCCTCTGCCCTTG	NA	False	NA	NA	False	NA	NA	NA	109656093	109657501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109656426_109656711_109656788_109657214
WTC11_00008105	chr1	+	656	3	FSM	ENSG00000168765.18	ENST00000493171.5	921	3	265	0	265	0	multi-exon	FALSE	canonical	3	147	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACCTGCCTCCTCGTTC	109657729	False	NA	NA	False	NA	NA	NA	109658538	109661338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109658910_109658999_109659111_109661164
WTC11_00008109	chr1	+	5569	1	FSM	ENSG00000258634.3	ENST00000554749.1	4216	1	17	-1370	17	1370	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAAAACTGGCCACGGC	110058346	False	NA	NA	False	NA	NA	NA	110058356	110063925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110058400_110063900
WTC11_00008110	chr1	+	5918	4	NNC	ENSG00000116396.15	novel	18750	4	NA	NA	-238	-440	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.94392028877595	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATGAGACTTGTGTTTC	NA	False	NA	20	True	AATAAA	-27	NA	110210075	110248684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_110212178_110225974_110226179_110243327_110245504_110247248
WTC11_00008112	chr1	+	3938	2	ISM	ENSG00000162775.17	ENST00000617047.1	3284	3	0	4	0	0	intron_retention	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTCTGCCTGGA	110334021	True	NA	18	True	AATAAA	-16	NA	110339465	110346673	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_110342269_110345538
WTC11_00008113	chr1	+	1427	1	FSM	ENSG00000224699.10	ENST00000662452.1	1353	1	0	-74	0	74	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCACTATCATGGC	NA	False	NA	NA	False	NA	NA	NA	110407524	110408951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110407500_110409000
WTC11_00008114	chr1	+	663	4	FSM	ENSG00000134255.15	ENST00000476865.5	783	4	120	0	120	0	multi-exon	FALSE	canonical	1	21	junction_1	66.788222514652	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCTGATTGGATGTTT	111139651	True	NA	NA	False	NA	NA	NA	111139853	111161196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111139915_111147641_111148054_111159379_111159528_111161154
WTC11_00008117	chr1	+	1008	1	FSM	ENSG00000233337.1	ENST00000436366.1	524	1	-425	-59	-425	59	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGCTAACCTTTC	NA	False	NA	NA	False	NA	NA	NA	111437088	111438096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111437100_111438100
WTC11_00008118	chr1	+	880	6	FSM	ENSG00000116459.11	ENST00000468818.1	859	6	-21	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1072.83985757428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAATTGAATGAAACA	111427426	True	NA	-5	True	TTTAAA	-31	NA	111449463	111461312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111449582_111449836_111449874_111456226_111456250_111456629_111456756_111459456_111459637_111460916
WTC11_00008119	chr1	+	2759	10	FSM	ENSG00000064703.13	ENST00000680383.1	2755	10	-4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	68.4300129085672	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATAGATTTGATTAGTA	111751654	True	NA	-2	True	AATAAA	-1	NA	111755900	111767242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762676_111762783_111762905_111763008_111765736
WTC11_00008122	chr1	+	5242	8	FSM	ENSG00000198799.12	ENST00000492207.5	5076	8	-65	-101	-65	101	multi-exon	FALSE	canonical	3	85	junction_1	17.846282411706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTCCCAGGTTCAAG	113100314	False	NA	NA	False	NA	NA	NA	113100331	113127301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
WTC11_00008123	chr1	+	3673	23	FSM	ENSG00000163399.16	ENST00000537345.5	3763	23	90	0	90	0	multi-exon	FALSE	canonical	2	27	junction_1	511.689837371646	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGCCCTCGTC	116373945	False	NA	21	True	AATAAA	-18	NA	116373956	116404772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116374242_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
WTC11_00008125	chr1	+	727	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	18	482	1	-482	multi-exon	FALSE	canonical	1	2	junction_3	4.64279609239471	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	119139890	True	NA	NA	False	NA	NA	NA	119140413	119150934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
WTC11_00008126	chr1	+	2645	7	ISM	ENSG00000270231.4	ENST00000583271.5	5330	25	24898	-148	24898	148	3prime_fragment	FALSE	canonical	0	0	junction_1	97.343749442661	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTAGCAGAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	120461250	120467887	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_120461427_120462145_120462198_120462793_120462967_120463675_120463728_120464375_120464549_120465262_120465372_120465977
WTC11_00008127	chr1	+	3099	11	NIC	ENSG00000273136.8	novel	3671	22	NA	NA	16515	104	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	109.239187107924	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATTTTCTAATCTCT	NA	False	NA	107	True	AATAAA	-15	NA	120830420	120842214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120830589_120831297_120831350_120831987_120832161_120832874_120832984_120833602_120833776_120834494_120834547_120837168_120837342_120838050_120838103_120838744_120838918_120839631_120839741_120840349
WTC11_00008129	chr1	+	346	1	FSM	ENSG00000227212.3	ENST00000476786.1	399	1	18	35	18	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGGCCTCCCACCTT	NA	False	NA	NA	False	NA	NA	NA	144442623	144442969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_144442600_144443000
WTC11_00008130	chr1	+	1425	1	FSM	ENSG00000223612.3	ENST00000433527.1	519	1	-135	-771	-135	771	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTACCCATTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	145232865	145234290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145232900_145234300
WTC11_00008131	chr1	+	306	1	FSM	ENSG00000234367.1	ENST00000443612.1	402	1	98	-2	98	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTTCCTTCCACTCC	NA	False	NA	NA	False	NA	NA	NA	145407869	145408175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145407900_145408200
WTC11_00008132	chr1	+	2034	13	ISM	ENSG00000117262.19	ENST00000313835.14	2124	14	43	190	-2	0	intron_retention	FALSE	canonical	3	199	junction_1	16.6706245300595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTTGCCTTACGTTC	145604770	True	NA	NA	False	ATTAAA	-13	NA	145608030	145670460	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624
WTC11_00008133	chr1	+	2699	7	FSM	ENSG00000117262.19	ENST00000493684.5	2699	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	87.8040748231855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTTGCCTTACGTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	145644085	145670460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145645744_145646203_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
WTC11_00008135	chr1	+	1894	2	Genic_Genomic	ENSG00000271121.2	novel	546	1	NA	NA	-302	1094	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACTTTATACTCAC	NA	False	NA	NA	False	NA	NA	NA	146297867	146299809	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_146298380_146298427
WTC11_00008136	chr1	+	1884	3	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-323	-46997	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	5.5	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCACATTTTGTCACTT	146937915	True	NA	NA	False	NA	NA	NA	146938420	146947604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146938983_146943290_146943563_146946554
WTC11_00008137	chr1	+	6212	25	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-323	0	intron_retention	TRUE	canonical	1	1	junction_4	29.2900959749575	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTAATCTCTTCCAC	146937915	True	NA	NA	False	AATAAA	-20	NA	146938420	146996202	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146939013_146943290_146943563_146949323_146949423_146951347_146952038_146959858_146960007_146960108_146960319_146962160_146962264_146963094_146963310_146964356_146964430_146964892_146965105_146966463_146966674_146968447_146968551_146969381_146969597_146976928_146977002_146977465_146977672_146978958_146979011_146982927_146983012_146984133_146984186_146984812_146984986_146985704_146985757_146986351_146986525_146987233_146987286_146992711_146992885_146993598_146993708_146994331
WTC11_00008139	chr1	+	610	1	FSM	ENSG00000225603.3	ENST00000435000.2	1665	1	143	912	143	-912	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTGAAGCATGCCTC	NA	False	NA	NA	False	NA	NA	NA	147050959	147051569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147051000_147051600
WTC11_00008141	chr1	+	2958	24	NNC	ENSG00000131778.20	novel	2967	23	NA	NA	10	43113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	189.635906245674	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAGAAAAAGAAAAAA	147232600	True	NA	NA	False	AAAAAG	-9	NA	147242718	147338878	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430_147295762_147338851
WTC11_00008142	chr1	+	8778	7	ISM	ENSG00000116128.12	ENST00000684121.1	5639	8	1572	0	1572	0	3prime_fragment	FALSE	canonical	3	36	junction_2	40.4955415927345	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTTTCTTACAAAATT	147608324	False	NA	3	True	AATAAA	-3	NA	147608356	147626198	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_147611890_147612882_147612978_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
WTC11_00008143	chr1	+	1927	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	27	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	63.4356590588975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926115	True	NA	NA	False	ATTAAA	-15	NA	147928419	147993339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
WTC11_00008144	chr1	+	1667	15	NNC	ENSG00000188092.15	novel	1954	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_14	62.6811253040958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926129	True	NA	NA	False	ATTAAA	-15	NA	147928433	147993339	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710_147992843_147993068
WTC11_00008145	chr1	+	993	3	NIC	ENSG00000274372.5	novel	1148	6	NA	NA	-328	-28	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAATAAAAGTCTGCT	NA	False	NA	-27	True	NA	NA	NA	148012874	148025900	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_148013554_148024529_148024720_148025776
WTC11_00008146	chr1	+	668	1	Genic_Genomic	ENSG00000198658.4	novel	NA	NA	NA	NA	2918	414	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTAACTGATAAAACACT	NA	False	NA	NA	False	NA	NA	NA	148149312	148149980	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_148149300_148150000
WTC11_00008147	chr1	+	314	1	FSM	ENSG00000227700.1	ENST00000415381.1	517	1	62	141	62	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGGGCGAAGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	148246230	148246544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148246200_148246500
WTC11_00008149	chr1	+	1438	2	Genic_Genomic	ENSG00000177144.8	novel	3642	1	NA	NA	-4979	-3	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCTAAAATATAAAACTT	NA	False	NA	NA	False	AATAAA	-31	NA	148743794	148752412	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_148743825_148751004
WTC11_00008150	chr1	+	2159	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	-123	1606	-123	-1606	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCGCCTCCCAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	148748650	148750809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148748600_148750800
WTC11_00008151	chr1	+	2111	2	Genic_Genomic	ENSG00000177144.8	novel	3642	1	NA	NA	-123	-1606	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCGCCTCCCAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	148748650	148750809	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_148749163_148749210
WTC11_00008152	chr1	+	721	3	ISM	ENSG00000286219.2	ENST00000578189.1	5034	6	48942	3829	48942	-757	3prime_fragment	FALSE	canonical	3	91	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTAACAGTAGGTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	149455317	149464201	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_149455578_149463490_149463827_149464076
WTC11_00008153	chr1	+	413	5	NNC	ENSG00000271383.8	novel	3715	22	NA	NA	30829	-12728	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.63680924774785	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAGGTGATAAGCCT	NA	False	NA	NA	False	NA	NA	NA	149530794	149542036	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149530879_149535633_149535727_149536445_149536498_149537099_149537180_149541932
WTC11_00008155	chr1	+	2576	8	NNC	ENSG00000271383.8	novel	13941	94	NA	NA	35584	-27	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	7.64786217961381	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATTAATAAAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	149535549	149556334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149535727_149536445_149536498_149541852_149541933_149546669_149546763_149552208_149552261_149552886_149553060_149553773_149553883_149554494
WTC11_00008157	chr1	+	365	2	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGGCGCTACTATTTT	NA	False	NA	12	True	AATAAA	-29	NA	149558514	149559647	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_149558624_149559391
WTC11_00008158	chr1	+	1695	4	NIC	ENSG00000277147.7	novel	737	3	NA	NA	277	0	intron_retention	FALSE	canonical	1	7	junction_2	13.4246870437348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606594	False	NA	3	True	AATAAA	-17	NA	149606610	149647610	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607555_149608461_149608517_149646598_149647065_149647380
WTC11_00008159	chr1	+	752	1	NIC	ENSG00000277147.7	novel	323	3	NA	NA	35	1482	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTTCCGGCCTCCCCG	149606663	False	NA	NA	False	NA	NA	NA	149607443	149608195	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607400_149608200
WTC11_00008160	chr1	+	1313	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	-255	-247	-197	0	multi-exon	FALSE	canonical	2	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	NA	False	NA	16	True	ATTAAA	-17	NA	149899370	149900795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149899731_149899842
WTC11_00008162	chr1	+	1714	10	NNC	ENSG00000118298.12	novel	1788	11	NA	NA	-166	-20	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_5	145.473938101182	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATATTTTTGATCAATA	150257585	False	NA	-34	True	GATAAA	-16	NA	150257607	150265029	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_150258184_150260150_150260172_150261577_150261639_150262157_150262301_150262524_150262621_150263046_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
WTC11_00008163	chr1	+	1626	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	96.0971730420134	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255414	True	NA	15	True	ATTAAA	-15	NA	150257850	150265078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
WTC11_00008165	chr1	+	345	4	NIC	ENSG00000118292.9	novel	509	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	94.6654929504704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150271192	True	NA	10	True	AATAAA	-16	NA	150272795	150280916	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150272864_150274086_150274171_150276521_150276633_150280834
WTC11_00008166	chr1	+	5010	9	NIC	ENSG00000163125.16	novel	7605	10	NA	NA	40	153	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	24.6218272067692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACATGTGCAATGTTG	150362595	True	NA	14	True	AATAAA	-18	NA	150364186	150473709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150470560
WTC11_00008167	chr1	+	2707	18	NNC	ENSG00000143374.18	novel	2727	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_14	87.9276991443345	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485478	True	NA	15	True	AATAAA	-29	NA	150487434	150507602	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504635_150504734_150504905_150504979_150505590_150505706_150506915
WTC11_00008169	chr1	+	4048	17	FSM	ENSG00000143382.16	ENST00000369038.6	4167	17	117	2	117	2	multi-exon	FALSE	canonical	2	9	junction_3	5.63159335801157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCTCTTCCTTGTCGG	150551650	False	NA	6	True	ATTAAA	-21	NA	150552204	150560935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150552309_150552542_150552601_150552897_150553254_150553425_150554123_150554364_150554468_150555428_150555566_150556161_150556367_150556620_150556794_150556938_150557051_150557149_150557336_150557493_150557624_150557944_150558150_150558472_150558650_150558961_150559166_150559286_150559467_150559760_150559906_150560059
WTC11_00008170	chr1	+	5863	1	Genic_Genomic	ENSG00000288880.1	novel	NA	NA	NA	NA	-4	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGGAACTCAGAGACT	150629353	True	NA	-6	True	AATAAA	-2	NA	150629847	150635710	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_150629800_150635700
WTC11_00008172	chr1	+	1777	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	45.791799362865	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTGTGTGTCTT	150641573	False	NA	5	True	NA	NA	NA	150641692	150659642	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_150641721_150642029_150642087_150642992_150643087_150658044
WTC11_00008173	chr1	+	363	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_3	28.0832096931007	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTCAATTCAACTTCT	150641582	False	NA	NA	False	AATAAA	-18	NA	150641701	150646376	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150646257
WTC11_00008174	chr1	+	536	5	FSM	ENSG00000143379.13	ENST00000525956.5	587	5	51	0	9	0	multi-exon	FALSE	canonical	2	9	junction_1	29.2446576317795	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTTCATGGATGCT	150923539	True	NA	NA	False	AAGAAA	-15	NA	150926313	150941371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926349_150927703_150927975_150929966_150930119_150939939_150939975_150941328
WTC11_00008175	chr1	+	4376	22	NIC	ENSG00000143379.13	novel	2321	5	NA	NA	51	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	20.066329917847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGATTGTGGTTTTGTT	150926613	True	NA	10	True	GATAAA	-1	NA	150926690	150964732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150926809_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
WTC11_00008177	chr1	+	1070	5	ISM	ENSG00000143412.10	ENST00000368947.9	1551	14	5583	-335	5583	335	3prime_fragment	FALSE	canonical	2	5	junction_1	4.30116263352131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCTCAAATTCATGTG	150987816	False	NA	NA	False	NA	NA	NA	150987874	150995969	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
WTC11_00008179	chr1	+	3849	16	NIC	ENSG00000143398.20	novel	3800	16	NA	NA	-78	0	combination_of_known_junctions	TRUE	canonical	3	36	junction_3	171.519820688132	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	151198453	False	NA	4	True	TATAAA	-20	NA	151198472	151249504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151199082_151224247_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
WTC11_00008180	chr1	+	570	2	FSM	ENSG00000143398.20	ENST00000424999.1	567	2	-3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATCTGATGTGTATCTG	151187458	True	NA	NA	False	NA	NA	NA	151198550	151216000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151199082_151215961
WTC11_00008182	chr1	+	449	5	FSM	ENSG00000143398.20	ENST00000461816.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	255.002328420742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGCCTTCCGCTACT	NA	False	NA	NA	False	NA	NA	NA	151224138	151232307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247
WTC11_00008184	chr1	+	755	5	FSM	ENSG00000159377.11	ENST00000474100.1	755	5	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_4	84.1471924665345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGAGTGGTTTTTGTC	151400158	False	NA	13	True	AATAAA	-13	NA	151400173	151401936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151400188_151400441_151400589_151400763_151400846_151401238_151401631_151401816
WTC11_00008185	chr1	+	1287	11	FSM	ENSG00000143376.14	ENST00000642376.1	1437	11	150	0	-33	0	multi-exon	TRUE	canonical	2	6	junction_1	21.191743675309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGCCAGGACATTCT	151606718	True	NA	NA	False	NA	NA	NA	151612155	151693618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151612382_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
WTC11_00008186	chr1	+	2406	12	FSM	ENSG00000143376.14	ENST00000368841.7	2498	12	92	0	-33	0	multi-exon	FALSE	canonical	1	2	junction_1	20.9990161123313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAAAGTTAAAGTC	151606718	True	NA	NA	False	NA	NA	NA	151612155	151694505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151612382_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
WTC11_00008187	chr1	+	853	5	NIC	ENSG00000143450.19	novel	851	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_2	1.4790199457749	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	151762906	True	NA	4	True	AATAAA	-15	NA	151762967	151771330	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151763168_151767162_151767300_151768057_151768234_151770171_151770258_151771076
WTC11_00008188	chr1	+	677	4	NIC	ENSG00000143450.19	novel	745	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_2	1.63299316185545	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	151762906	True	NA	4	True	AATAAA	-15	NA	151762967	151771330	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151763168_151767162_151767300_151770171_151770258_151771076
WTC11_00008189	chr1	+	1114	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-3616	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.56846672960488	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTCCAAGTCTGGAGG	151838177	True	NA	NA	False	NA	NA	NA	151838260	151850380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151838738_151841740_151842032_151844044_151844243_151850232
WTC11_00008191	chr1	+	481	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	0	78	0	-73	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCCACCAAGGGCGCAA	153628375	True	NA	-71	True	NA	NA	NA	153628433	153631961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153628497_153630508_153630663_153631697
WTC11_00008192	chr1	+	3597	31	FSM	ENSG00000143624.14	ENST00000435409.6	3597	31	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	78.0716480050359	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGACCATAGTGGAA	153728036	False	NA	NA	False	NA	NA	NA	153728090	153773535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153728212_153728552_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
WTC11_00008193	chr1	+	5741	29	FSM	ENSG00000143624.14	ENST00000481797.5	5741	29	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	87.6502500083748	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGAGTGTCTGC	153728428	False	NA	3	True	AATAAA	-16	NA	153728482	153774079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153748756_153751094_153751240_153752278_153752409_153753700_153753819_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
WTC11_00008195	chr1	+	2255	9	NIC	ENSG00000143554.14	novel	3351	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	59.7327380922723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGTATCTGTCATTAT	153775296	False	NA	20	True	AATAAA	-31	NA	153775318	153780151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_153776165_153776517_153776728_153777061_153777221_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779825
WTC11_00008196	chr1	+	380	1	FSM	ENSG00000236327.2	ENST00000441288.2	271	1	12	-121	12	121	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGACCAACATGGCAA	NA	False	NA	NA	False	NA	NA	NA	153890606	153890986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153890600_153891000
WTC11_00008197	chr1	+	415	1	FSM	ENSG00000273026.1	ENST00000608147.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTGGTATTACTA	153966502	False	NA	4	True	AATAAA	-15	NA	153966515	153966930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153966500_153966900
WTC11_00008198	chr1	+	1453	10	NIC	ENSG00000143578.16	novel	906	6	NA	NA	-29	-185	combination_of_known_junctions	TRUE	canonical	3	15	junction_1	51.923257711338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCCACCTGGAGCCAAG	153967312	True	NA	NA	False	NA	NA	NA	153967504	153973946	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_153967885_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
WTC11_00008199	chr1	+	4081	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_27	306.140772912571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201118	True	NA	7	True	TATAAA	-14	NA	154220866	154270847	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
WTC11_00008200	chr1	+	3996	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_27	311.429642931707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGTGGCTTCTTGGATG	154201118	True	NA	24	True	AATAAA	-45	NA	154220866	154271508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270880
WTC11_00008201	chr1	+	3410	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	261.526524971921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	154201194	True	NA	25	True	AATAAA	-22	NA	154220942	154263504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
WTC11_00008203	chr1	+	5596	27	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	-172	-1	intron_retention	FALSE	canonical	3	240	junction_1	287.127492145148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGTGGCTTCTTGGATG	154201407	False	NA	24	True	AATAAA	-45	NA	154221155	154271508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361
WTC11_00008205	chr1	+	1537	12	FSM	ENSG00000143515.19	ENST00000368487.7	1523	12	-14	0	-14	0	multi-exon	TRUE	canonical	2	14	junction_11	4.83957514698406	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTCCTTCCTTCTAGG	154322064	True	NA	NA	False	AATAAA	-15	NA	154325538	154337846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154325703_154328104_154328173_154330395_154330455_154330814_154330929_154331047_154331147_154331443_154331506_154331605_154331679_154331953_154332025_154332617_154332698_154334106_154334266_154334502_154334592_154337347
WTC11_00008206	chr1	+	1025	7	FSM	ENSG00000160712.13	ENST00000622330.4	1496	7	443	28	21	-28	multi-exon	FALSE	canonical	0	0	junction_6	4.30761599444003	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCCGCCTCAGCCTC	154405450	False	NA	NA	False	NA	NA	NA	154405635	154437516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154437434
WTC11_00008207	chr1	+	565	6	FSM	ENSG00000160712.13	ENST00000515190.1	570	6	0	5	0	-5	multi-exon	FALSE	canonical	2	6	junction_3	1.85472369909914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGATGGGTCCCAGG	NA	False	NA	NA	False	NA	NA	NA	154434652	154454578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154454487
WTC11_00008208	chr1	+	799	1	FSM	ENSG00000271380.1	ENST00000605085.1	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGTATAAAAGGTG	154961743	False	NA	NA	False	AATAAA	-15	NA	154961824	154962623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154961800_154962600
WTC11_00008209	chr1	+	2395	2	NIC	ENSG00000160688.19	novel	1803	3	NA	NA	-119	0	intron_retention	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154983177	True	NA	18	True	AATAAA	-18	NA	154983218	154989012	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154984067_154987465
WTC11_00008214	chr1	+	1061	5	FSM	ENSG00000251246.1	ENST00000505139.1	1042	5	-19	0	-19	0	multi-exon	FALSE	canonical	1	2	junction_1	67.4166151627327	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGCTCAGGACTCCC	155061018	True	NA	NA	False	NA	NA	NA	155063728	155086807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155063937_155085090_155085405_155085876_155085943_155086127_155086206_155086412
WTC11_00008224	chr1	+	2376	14	NIC	ENSG00000125459.17	novel	2422	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	61.8801093162745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGATTTGCAAAATCTT	155610159	True	NA	13	True	NA	NA	NA	155610214	155614935	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613734_155614058
WTC11_00008226	chr1	+	2407	14	NIC	ENSG00000125459.17	novel	2422	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	70.4397010164718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGATTTGCAAAATCT	155610185	True	NA	12	True	NA	NA	NA	155610240	155614934	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611853_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
WTC11_00008230	chr1	+	530	2	ISM	ENSG00000203761.5	ENST00000314835.5	1709	14	-7	3694	-7	-3694	5prime_fragment	FALSE	canonical	3	243	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCTCCTAAGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	155745821	155746443	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_155745913_155746004
WTC11_00008232	chr1	+	911	6	FSM	ENSG00000196189.14	ENST00000462892.1	993	6	82	0	82	0	multi-exon	FALSE	canonical	3	28	junction_2	7.7614431647729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAATCAGTGAGTGTAGG	156161270	False	NA	NA	False	NA	NA	NA	156161308	156175647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555
WTC11_00008233	chr1	+	905	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	-4	0	2	0	multi-exon	FALSE	canonical	1	20	junction_4	764.197252023324	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	156575924	True	NA	15	True	AATAAA	-17	NA	156591757	156594131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
WTC11_00008234	chr1	+	1922	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	10	-2	intron_retention	FALSE	canonical	3	24	junction_1	16.8663043439345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTCCCATTTCTGT	156728815	False	NA	23	True	ATTAAA	-12	NA	156728969	156736947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156729216_156731990_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
WTC11_00008235	chr1	+	1096	4	FSM	ENSG00000143303.12	ENST00000476229.5	1096	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.471197037382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156731870	False	NA	25	True	ATTAAA	-14	NA	156732024	156736949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156732474_156733376_156733521_156735724_156735910_156736631
WTC11_00008236	chr1	+	470	3	FSM	ENSG00000143294.15	ENST00000473387.1	452	3	-18	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	518	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTGAAGAGCTGCCT	156757665	True	NA	NA	False	NA	NA	NA	156767534	156786980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156767584_156782281_156782330_156786607
WTC11_00008237	chr1	+	523	1	FSM	ENSG00000224520.2	ENST00000414328.2	1447	1	248	676	248	-676	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCTGAGGTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	157073504	157074027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_157073500_157074000
WTC11_00008238	chr1	+	1264	1	FSM	ENSG00000231434.1	ENST00000436135.1	2167	1	1551	-648	1551	648	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCCAAGATCTAACAA	NA	False	NA	NA	False	AATACA	-19	NA	158525222	158526486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158525200_158526500
WTC11_00008239	chr1	+	926	6	FSM	ENSG00000162736.17	ENST00000467837.5	726	6	-65	-135	12	135	multi-exon	FALSE	canonical	2	5	junction_1	170.219152858895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGAGGCTGAGACAGG	160338834	True	NA	NA	False	NA	NA	NA	160343327	160350340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160343482_160343703_160343889_160344721_160344827_160348998_160349123_160349548_160349671_160350104
WTC11_00008240	chr1	+	5737	5	ISM	ENSG00000162738.6	ENST00000368061.3	5354	8	17367	0	-1562	0	3prime_fragment	FALSE	canonical	3	155	junction_3	12.6762573340872	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	160417905	False	NA	11	True	AATAAA	-16	NA	160417930	160428670	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
WTC11_00008241	chr1	+	818	4	FSM	ENSG00000228863.8	ENST00000443928.6	1370	4	552	0	42	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTAAAATGGCAGGAAT	160673441	True	NA	NA	False	NA	NA	NA	160673563	160684067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160673655_160676359_160676505_160678942_160679056_160683598
WTC11_00008243	chr1	+	586	4	FSM	ENSG00000158793.14	ENST00000479266.5	567	4	-19	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	92.9169282507529	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGTTGTGAAAGGATG	161115391	True	NA	NA	False	NA	NA	NA	161118085	161119952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161118179_161119133_161119389_161119508_161119613_161119818
WTC11_00008244	chr1	+	1006	7	NNC	ENSG00000143222.12	novel	888	6	NA	NA	-20061	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	365.705558551624	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	161132699	False	NA	19	True	AATAAA	-18	NA	161132714	161158856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_161132781_161153925_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
WTC11_00008245	chr1	+	490	2	FSM	ENSG00000143222.12	ENST00000482672.1	492	2	-7	9	0	-9	multi-exon	FALSE	canonical	3	19	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTAGAAGGGGAGGGAT	161143167	True	NA	NA	False	NA	NA	NA	161153977	161157346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161154071_161156949
WTC11_00008247	chr1	+	1482	11	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	104.699617955368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164206	True	NA	19	True	AATAAA	-16	NA	161166425	161171218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00008248	chr1	+	633	5	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	36	junction_2	167.744411233281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164232	True	NA	19	True	AATAAA	-16	NA	161166451	161171218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166612_161166839_161166935_161170619_161170770_161170906_161170950_161171033
WTC11_00008251	chr1	+	1349	11	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_3	112.307435194648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166817	False	NA	19	True	AATAAA	-16	NA	161166860	161171218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166935_161167099_161167235_161167370_161167487_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
WTC11_00008254	chr1	+	736	1	FSM	ENSG00000288093.1	ENST00000667751.1	1871	1	39	1096	39	-1096	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTCCAGACCAGCC	161400023	False	NA	NA	False	NA	NA	NA	161400036	161400772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161400000_161400800
WTC11_00008256	chr1	+	1856	15	FSM	ENSG00000118217.7	ENST00000680462.1	2974	15	-12	1130	0	-1130	multi-exon	FALSE	canonical	0	0	junction_14	30.886890422961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGTATTTCCCTTAC	161764373	True	NA	NA	False	NA	NA	NA	161766308	161864825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161864740
WTC11_00008262	chr1	+	6858	9	NIC	ENSG00000185630.19	novel	7087	9	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	47.5815090134813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	164558401	False	NA	8	True	AATAAA	-17	NA	164559097	164851821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_164559530_164559721_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
WTC11_00008264	chr1	+	731	1	FSM	ENSG00000269887.1	ENST00000602747.1	715	1	-47	31	-47	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATCTATTGCTCTC	164680026	False	NA	-22	True	NA	NA	NA	164680037	164680768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164680000_164680800
WTC11_00008265	chr1	+	403	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	56	1883	56	-1883	multi-exon	FALSE	canonical	0	0	junction_1	1	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCCTGAATGTAAGGAAA	166165877	True	NA	NA	False	NA	NA	NA	166165907	166339017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_166166055_166335327_166335466_166338899
WTC11_00008266	chr1	+	1167	1	FSM	ENSG00000232341.2	ENST00000447259.2	1282	1	187	-72	187	72	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGGCAGTGAGAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	166747565	166748732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_166747600_166748700
WTC11_00008267	chr1	+	1125	3	FSM	ENSG00000143184.5	ENST00000367818.4	1227	3	0	102	0	-102	multi-exon	FALSE	canonical	2	3	junction_1	3	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATAAGCTTTTAATGCTC	NA	False	NA	NA	False	NA	NA	NA	168576604	168581967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168576699_168580062_168580178_168581051
WTC11_00008268	chr1	+	925	6	FSM	ENSG00000000460.17	ENST00000472795.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64.0674644417898	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	169794698	False	NA	NA	False	AATAAA	-16	NA	169794729	169804386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169794906_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074
WTC11_00008269	chr1	+	2808	24	NIC	ENSG00000000460.17	novel	925	6	NA	NA	112	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.5980276564843	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAATCTAGTGAAAATA	169794810	False	NA	4	True	TATAAA	-14	NA	169794841	169853081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_169794906_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
WTC11_00008272	chr1	+	1052	7	ISM	ENSG00000076258.10	ENST00000367749.4	2303	10	13	9319	-12	-382	5prime_fragment	FALSE	canonical	2	7	junction_4	5.99073358520381	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTATAATATGATGGT	171314070	True	NA	NA	False	NA	NA	NA	171314195	171332765	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708
WTC11_00008273	chr1	+	10277	35	NNC	ENSG00000117523.18	novel	10624	35	NA	NA	0	46462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	57.2497412393481	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGGCTCATGTCTGT	171511942	True	NA	NA	False	AAGAAA	-25	NA	171512031	171639973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584542_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586_171593510_171639943
WTC11_00008275	chr1	+	2256	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-8	-120	intron_retention	FALSE	canonical	3	35	junction_4	118.196752164441	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGACCTTGGACTCCC	171776335	True	NA	NA	False	NA	NA	NA	171781673	171796783	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
WTC11_00008278	chr1	+	454	4	FSM	ENSG00000076321.11	ENST00000479505.5	450	4	-4	0	-4	0	multi-exon	FALSE	canonical	2	9	junction_1	19.8158185969358	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAGCACCCTCGACAA	173713360	True	NA	NA	False	NA	NA	NA	173714936	173733828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712
WTC11_00008279	chr1	+	1852	14	NNC	ENSG00000152061.24	novel	2899	21	NA	NA	49	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	5.01477108092511	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGAAGTTCTTTTCAT	174158150	True	NA	NA	False	NA	NA	NA	174159458	174394146	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_174159658_174219124_174219164_174219254_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994
WTC11_00008280	chr1	+	2549	4	NNC	ENSG00000152061.24	novel	2605	14	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATTCAAGACTATTTG	174239058	False	NA	NA	False	AATAAA	-22	NA	174239187	174246346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_174239315_174241482_174241658_174242981_174243180_174244297
WTC11_00008281	chr1	+	3912	13	ISM	ENSG00000152061.24	ENST00000681986.1	8634	26	477853	2843	-5	-1415	3prime_fragment	FALSE	canonical	1	3	junction_4	92.3846127158991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAAGTTTGATAAGTCC	NA	False	NA	NA	False	NA	NA	NA	174637372	174992465	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
WTC11_00008282	chr1	+	481	3	NIC	ENSG00000152061.24	novel	648	4	NA	NA	-62	-15	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	47	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGGTATATTGAGCACA	174870620	True	NA	-1	True	AATAAA	-5	NA	174874395	174958167	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174957456_174957550_174957890
WTC11_00008283	chr1	+	6302	7	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-218	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	80.2567061926222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTATGTCTTTTT	174877189	False	NA	12	True	AATAAA	-12	NA	174877221	174995301	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174989848
WTC11_00008284	chr1	+	1375	6	NNC	ENSG00000116161.18	novel	2869	6	NA	NA	230	209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1263.64099332049	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGGTCATTTTGTTCA	174999029	False	NA	37	True	AATAAA	-41	NA	174999700	175010288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007197_175008608_175008707_175009922
WTC11_00008285	chr1	+	324	1	FSM	ENSG00000276563.1	ENST00000613288.1	217	1	-73	-34	-73	34	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTCTTTTTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	178017053	178017377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178017100_178017400
WTC11_00008286	chr1	+	9617	19	NIC	ENSG00000075391.17	novel	9843	18	NA	NA	278	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	13.1214648384307	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	178094351	False	NA	NA	False	AATAAA	-16	NA	178094381	178478850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178470692_178470724_178473074
WTC11_00008287	chr1	+	6093	15	FSM	ENSG00000057252.13	ENST00000540564.5	6861	15	35	733	35	-733	multi-exon	FALSE	canonical	1	1	junction_2	12.9198865857156	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATATAAGCCCGGTT	179293334	True	NA	NA	False	NA	NA	NA	179293748	179357944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179293937_179302676_179302803_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
WTC11_00008289	chr1	+	2838	13	NIC	ENSG00000116260.17	novel	2519	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	61	junction_12	148.241614902459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	180146184	True	NA	35	True	AATAAA	-19	NA	180154868	180198034	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196891_180197332
WTC11_00008290	chr1	+	415	1	FSM	ENSG00000231684.3	ENST00000423841.1	334	1	-43	-38	-43	38	mono-exon	FALSE	NA	NA	NA	NA	NA	1067	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTGCACTGAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	182335957	182336372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182336000_182336400
WTC11_00008291	chr1	+	440	1	FSM	ENSG00000261504.1	ENST00000566297.1	1376	1	-255	1191	-255	-1191	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGTGGGCGGCATAAAG	182614955	True	NA	NA	False	NA	NA	NA	182614998	182615438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182615000_182615400
WTC11_00008292	chr1	+	6680	25	NNC	ENSG00000135862.6	novel	7929	28	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	37	junction_24	132.830301094626	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	183110546	True	NA	30	True	AATAAA	-24	NA	183110580	183145592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142538
WTC11_00008296	chr1	+	215	1	NIC	ENSG00000286966.1	novel	855	3	NA	NA	162	-5422	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTAGAGACAAAGGAGACA	NA	False	NA	NA	False	NA	NA	NA	183613698	183613913	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183613700_183613900
WTC11_00008297	chr1	+	2924	19	FSM	ENSG00000116668.13	ENST00000367501.7	3001	19	77	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	12.2757665522135	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTCTGGAGTTCACAA	185156510	True	NA	1	True	AATAAA	-13	NA	185157156	185291007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_185157165_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
WTC11_00008298	chr1	+	888	1	FSM	ENSG00000273004.1	ENST00000609881.1	752	1	-98	-38	-98	38	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTATTCCCCCGCCCCT	185317664	False	NA	NA	False	NA	NA	NA	185317680	185318568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_185317700_185318600
WTC11_00008299	chr1	+	3967	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAAGATTATAGGGT	NA	False	NA	NA	False	AATGAA	-34	NA	185948312	185952279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_185948300_185952300
WTC11_00008300	chr1	+	7603	41	NIC	ENSG00000143341.12	novel	18368	107	NA	NA	-60327	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	6.13468621854452	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTTGAAGAACCTAAAAT	NA	False	NA	41	True	AATAAA	-23	NA	186093498	186190949	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_186093670_186094275_186094374_186095242_186095522_186103471_186103669_186106883_186106966_186108460_186108598_186112811_186112954_186113978_186114124_186114818_186114947_186115257_186115415_186116993_186117116_186117458_186117624_186119190_186119299_186119744_186119883_186120010_186120146_186122950_186123221_186125603_186125795_186128077_186128292_186129965_186130101_186130506_186130698_186132327_186132410_186136667_186136938_186137497_186137669_186137801_186137973_186144172_186144344_186144532_186144704_186145402_186145574_186145752_186145924_186151199_186151350_186151605_186151744_186152749_186152872_186153749_186153988_186165110_186165174_186166183_186166304_186166807_186166943_186171336_186171451_186172005_186172132_186174513_186174643_186182167_186182288_186187882_186188010_186189511
WTC11_00008302	chr1	+	700	2	ISM	ENSG00000116711.10	ENST00000367466.4	2879	18	150399	30	125062	-30	3prime_fragment	FALSE	canonical	3	13	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAATAAATACATCAAT	NA	False	NA	NA	False	NA	NA	NA	186979347	186988951	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_186979473_186988376
WTC11_00008303	chr1	+	1537	2	FSM	ENSG00000230426.5	ENST00000662036.1	1157	2	38	-418	-1	411	multi-exon	FALSE	canonical	2	8	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGTTTAAGCGGTTGT	187641093	True	NA	NA	False	ATTAAA	-16	NA	187641283	187687039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_187641482_187685700
WTC11_00008305	chr1	+	2212	18	FSM	ENSG00000134371.14	ENST00000650197.1	2212	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	124.844124264307	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAATACTATGTTATGA	193115956	False	NA	-44	True	NA	NA	NA	193122102	193251083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193237707_193237855_193249729_193249872_193250675
WTC11_00008307	chr1	+	463	3	NNC	ENSG00000116833.14	novel	1793	4	NA	NA	-3856	-569	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	19.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTTAGGCTCCTTTTT	200038156	True	NA	NA	False	AATAAA	-23	NA	200038968	200043966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_200039101_200039657_200039796_200043773
WTC11_00008308	chr1	+	7161	18	FSM	ENSG00000118200.15	ENST00000236925.8	7161	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.7780018931032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTCCTTTTCTGTTT	200739762	False	NA	19	True	AATAAA	-12	NA	200739778	200860701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200828572_200828606_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847209_200847293_200847639_200847710_200848031_200850235_200852540_200852678_200853274_200853496_200854816_200854890_200856009_200856126_200857305_200857425_200857753
WTC11_00008309	chr1	+	430	2	FSM	ENSG00000118200.15	ENST00000475326.1	451	2	0	21	0	-21	multi-exon	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGTTTTTATTCGTGTT	200856081	False	NA	NA	False	TATAAA	-17	NA	200856093	200857703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200856126_200857305
WTC11_00008311	chr1	+	647	1	FSM	ENSG00000223396.4	ENST00000482594.2	494	1	-177	24	-91	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGGTCAGCCACCTC	NA	False	NA	NA	False	NA	NA	NA	201519878	201520525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201519900_201520500
WTC11_00008312	chr1	+	5920	25	NNC	ENSG00000198700.10	novel	11416	24	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	187.887816521514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACTTCGTAGTGCTGC	201814751	True	NA	3	True	AATAAA	-14	NA	201829174	201884288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943_201876961_201882435
WTC11_00008315	chr1	+	771	3	FSM	ENSG00000163435.16	ENST00000495848.1	899	3	-7	135	0	-135	multi-exon	FALSE	canonical	3	38	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAACCCGTTTTCTCCT	202010310	True	NA	NA	False	NA	NA	NA	202010586	202012436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202010707_202011128_202011300_202011956
WTC11_00008319	chr1	+	870	3	ISM	ENSG00000143847.16	ENST00000688357.1	6503	30	0	35237	0	-3013	5prime_fragment	FALSE	canonical	2	11	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGTAAGTGGGGATGACC	203025630	True	NA	NA	False	NA	NA	NA	203026490	203043494	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_203026630_203038609_203039243_203043396
WTC11_00008320	chr1	+	6016	24	NIC	ENSG00000143847.16	novel	6508	30	NA	NA	-1474	0	intron_retention	FALSE	canonical	2	6	junction_9	6.71735612766926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGCCTCCAGTCTTT	NA	False	NA	11	True	AATAAA	-23	NA	203043934	203078735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203044096_203044378_203044454_203044695_203044786_203045367_203045560_203045840_203045988_203046247_203046383_203048226_203048311_203048582_203048715_203048917_203048981_203051768_203051878_203053752_203053962_203055431_203055673_203056119_203056156_203056451_203056509_203056783_203056951_203059177_203059272_203059769_203059852_203060216_203060418_203060969_203061033_203063827_203064004_203067694_203067793_203068452_203068629_203071691_203071761_203075576
WTC11_00008322	chr1	+	2666	3	ISM	ENSG00000163485.17	ENST00000337894.9	2901	4	554	30	-26	-29	3prime_fragment	FALSE	canonical	3	9	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTGACTAATAAAAAACT	203128109	True	NA	-27	True	NA	NA	NA	203128279	203167375	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_203128433_203128784_203129183_203165260
WTC11_00008323	chr1	+	388	2	FSM	ENSG00000058668.15	ENST00000466407.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGGAGTCAAATGAC	NA	False	NA	NA	False	NA	NA	NA	203723960	203727754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203723989_203727394
WTC11_00008324	chr1	+	6046	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_16	126.13538679716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787317	True	NA	8	True	AATAAA	-18	NA	203795678	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796497_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00008325	chr1	+	4523	19	NNC	ENSG00000058673.17	novel	3004	20	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	140.6756733118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787319	True	NA	8	True	AATAAA	-18	NA	203795680	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795776_203801574_203801640_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00008327	chr1	+	4685	20	NNC	ENSG00000058673.17	novel	7078	20	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	151.357129364356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787327	True	NA	8	True	AATAAA	-18	NA	203795688	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795795_203796450_203796602_203801574_203801640_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00008328	chr1	+	6135	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_16	131.607218177968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787352	True	NA	8	True	AATAAA	-18	NA	203795713	203854124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795795_203796292_203796602_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
WTC11_00008330	chr1	+	874	5	FSM	ENSG00000198625.14	ENST00000470797.5	909	5	35	0	12	0	multi-exon	FALSE	canonical	3	23	junction_3	5.62916512459885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACTTGAATTAGGATCC	204513031	True	NA	NA	False	NA	NA	NA	204516417	204532650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190
WTC11_00008331	chr1	+	9771	26	NIC	ENSG00000163531.17	novel	10336	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	14.0971486478649	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCCATGTGATTTGCT	204827626	True	NA	14	True	AATAAA	-17	NA	204828694	205022822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670_204976796_204977680_204977726_204978967_204979070_204979361_204979560_204980369_204980441_204981797_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
WTC11_00008332	chr1	+	427	3	FSM	ENSG00000163531.17	ENST00000468328.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGCATGGCAGCAGCC	NA	False	NA	NA	False	AATGAA	-2	NA	204981883	204988806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204982021_204987424_204987541_204988632
WTC11_00008338	chr1	+	709	1	FSM	ENSG00000206762.1	ENST00000384035.1	107	1	-175	-427	-175	427	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAGGCAATAGCACACC	205594838	False	NA	NA	False	NA	NA	NA	205594865	205595574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205594900_205595600
WTC11_00008339	chr1	+	3534	22	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	14	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_21	65.8308834470532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTTTCCCAGATCTCTT	206199407	True	NA	9	True	AATAAA	-26	NA	206203554	206456161	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206455772
WTC11_00008342	chr1	+	3453	5	FSM	ENSG00000266094.8	ENST00000577571.5	3496	5	43	0	43	0	multi-exon	FALSE	canonical	1	2	junction_1	3.26917420765551	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACTCATGTTAGAA	206557141	True	NA	10	True	AATAAA	-11	NA	206557207	206589267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206557694_206583268_206583380_206584386_206584685_206585179_206585296_206586825
WTC11_00008343	chr1	+	3206	12	NNC	ENSG00000117335.20	novel	3320	13	NA	NA	5	0	intron_retention	FALSE	canonical	2	4	junction_4	258.318977651422	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738366	True	NA	14	True	AATAAA	-15	NA	207752072	207795504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761250_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
WTC11_00008345	chr1	+	995	3	NIC	ENSG00000230937.13	novel	1072	4	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	42	junction_1	32.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAAAGCCTCTCTGCCT	209418116	True	NA	12	True	ACTAAA	-13	NA	209428834	209432541	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_209429409_209431742_209431826_209432203
WTC11_00008346	chr1	+	357	1	ISM	ENSG00000143469.20	ENST00000637265.1	13567	10	232813	34	149953	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTTTTTTAGTTAACA	NA	False	NA	NA	False	CATAAA	-7	NA	210170998	210171355	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_210171000_210171400
WTC11_00008347	chr1	+	714	1	FSM	ENSG00000226986.4	ENST00000431591.2	659	1	325	-380	325	380	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCACCCCCCCCAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	211207563	211208277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211207600_211208300
WTC11_00008348	chr1	+	1978	12	NIC	ENSG00000117625.14	novel	1827	11	NA	NA	-40	-44	combination_of_known_junctions	FALSE	canonical	3	48	junction_10	13.2876628295225	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTTTTGTTTAAAATA	211259308	False	NA	26	True	AATAAA	-39	NA	211259325	211313254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312354_211312488_211312719
WTC11_00008351	chr1	+	7959	2	ISM	ENSG00000117625.14	ENST00000486666.5	4086	3	6490	-1784	3940	-14	3prime_fragment	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATATAAAATTTTGT	NA	False	NA	NA	False	AATAAA	-4	NA	211307950	211316371	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_211312962_211313423
WTC11_00008353	chr1	+	3662	13	FSM	ENSG00000143476.18	ENST00000475419.5	3662	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	139.379652388718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTGATAAA	212029265	False	NA	NA	False	NA	NA	NA	212035845	212104594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
WTC11_00008355	chr1	+	331	1	FSM	ENSG00000236905.2	ENST00000449334.2	479	1	113	35	113	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTGTTGTCCACAG	NA	False	NA	NA	False	NA	NA	NA	212824139	212824470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212824100_212824500
WTC11_00008356	chr1	+	5971	11	NNC	ENSG00000162769.13	novel	5919	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	156.437080003431	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	212852424	True	NA	9	True	AATAAA	-19	NA	212858337	212899363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212859191_212863724_212863870_212870053_212870169_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
WTC11_00008357	chr1	+	507	1	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACGTCCAGGCATTC	212910284	False	NA	NA	False	NA	NA	NA	212910491	212910998	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212910500_212911000
WTC11_00008358	chr1	+	1736	6	FSM	ENSG00000143494.16	ENST00000271776.4	1730	6	-6	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	393.571340420006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCCTATCTGACACG	212922179	True	NA	NA	False	CATAAA	-16	NA	212950634	212974927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212950741_212961165_212961361_212966270_212966346_212972579_212972962_212973423_212974071_212974596
WTC11_00008359	chr1	+	4232	8	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	308	junction_4	452.020994636131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922179	True	NA	17	True	AATAAA	-19	NA	212950634	212991585	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212972579_212972962_212973954_212974071_212988511
WTC11_00008360	chr1	+	4263	9	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_2	409.747483213747	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922211	False	NA	17	True	AATAAA	-19	NA	212950666	212991585	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
WTC11_00008363	chr1	+	3839	18	NNC	ENSG00000136636.13	novel	4019	18	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_16	97.0676644814805	124	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTGCCAGTGGTTTCA	215561204	True	NA	9	True	AATAAA	-15	NA	215567401	215621731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619158_215619292_215620056
WTC11_00008364	chr1	+	906	2	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAGGGAACAAGTCTAC	216145783	False	NA	53	True	NA	NA	NA	216145794	216152697	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_216146200_216152196
WTC11_00008365	chr1	+	6286	1	ISM	ENSG00000067533.6	ENST00000366932.4	7765	5	46404	1	46355	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTTCTTGATTTT	218331686	False	NA	10	True	AATAAA	-20	NA	218331696	218337982	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_218331700_218338000
WTC11_00008366	chr1	+	215	1	FSM	ENSG00000223375.1	ENST00000444678.1	216	1	-105	106	-105	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTATTGTGTGAGTT	218338425	False	NA	NA	False	NA	NA	NA	218338435	218338650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_218338400_218338600
WTC11_00008367	chr1	+	1746	1	FSM	ENSG00000218283.2	ENST00000404582.2	967	1	-105	-674	-105	674	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACCAGAAAACA	220253386	False	NA	NA	False	AATAAA	-27	NA	220253464	220255210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220253500_220255200
WTC11_00008368	chr1	+	305	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTACCATCTCATTAAAA	221968436	False	NA	NA	False	NA	NA	NA	221968577	221968882	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221968600_221968900
WTC11_00008369	chr1	+	3855	14	NNC	ENSG00000162819.12	novel	4104	13	NA	NA	228	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	40	junction_1	17.3198248074554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222712442	False	NA	17	True	AATAAA	-18	NA	222712791	222735187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627_222733077_222733097
WTC11_00008372	chr1	+	775	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	11	-3	intron_retention	FALSE	canonical	3	4	junction_1	38.8482625094096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTAAGCCCTTGTTTTTT	222813460	True	NA	-3	True	AATAAA	-10	NA	222815139	222837377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815172_222823855_222823946_222827427_222827602_222835118_222835216_222836995
WTC11_00008373	chr1	+	744	2	FSM	ENSG00000154309.9	ENST00000482856.1	874	2	-14	144	3	-144	multi-exon	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGAGAGGAGAAAAAT	222928358	True	NA	NA	False	NA	NA	NA	222928426	222943406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222928571_222942806
WTC11_00008374	chr1	+	12098	2	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1789	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAAACTTGTAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	223012985	223030388	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_223024544_223029848
WTC11_00008375	chr1	+	679	2	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGCGTATATATATGG	NA	False	NA	NA	False	NA	NA	NA	223024103	223030087	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_223024732_223030036
WTC11_00008376	chr1	+	1418	2	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGGCTCACAGAGGGGC	NA	False	NA	-64	True	NA	NA	NA	223040437	223050611	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_223040562_223049317
WTC11_00008377	chr1	+	483	2	FSM	ENSG00000162909.18	ENST00000483579.1	496	2	0	13	0	-13	multi-exon	FALSE	canonical	3	139	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTTTTGATCTCG	NA	False	NA	NA	False	AATAAA	-37	NA	223747107	223749463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223747166_223749038
WTC11_00008378	chr1	+	364	2	NNC	ENSG00000143786.8	novel	968	3	NA	NA	-6	-81493	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCGAGTAGCTGGGA	224434628	True	NA	NA	False	NA	NA	NA	224434918	224439728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_224435188_224439633
WTC11_00008381	chr1	+	726	3	FSM	ENSG00000225518.3	ENST00000656201.1	1110	3	4	380	4	-380	multi-exon	FALSE	canonical	1	1	junction_1	2	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGGGGGCTGTGGGAA	226083517	True	NA	NA	False	NA	NA	NA	226083593	226089909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226083642_226086795_226087054_226089489
WTC11_00008382	chr1	+	2871	13	FSM	ENSG00000143801.18	ENST00000524196.6	3116	13	245	0	-21	0	multi-exon	FALSE	canonical	1	4	junction_1	36.470212350477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTGAGACTTTGTACAAA	NA	False	NA	NA	False	NA	NA	NA	226870428	226896677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226870506_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
WTC11_00008384	chr1	+	3292	2	ISM	ENSG00000181450.18	ENST00000465266.1	533	5	-28	68750	-20	-68750	5prime_fragment	FALSE	canonical	3	64	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATTCAAAAA	227558670	True	NA	NA	False	NA	NA	NA	227563522	227585603	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_227563725_227582513
WTC11_00008389	chr1	+	1275	8	FSM	ENSG00000143774.17	ENST00000366718.5	1275	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	479.161129219704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	228129315	False	NA	NA	False	AATAAA	-25	NA	228144327	228148951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228144753_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
WTC11_00008390	chr1	+	306	2	FSM	ENSG00000154358.23	ENST00000602832.1	372	2	66	0	66	0	multi-exon	FALSE	canonical	1	2	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAAGGGGCCACGGCC	NA	False	NA	NA	False	NA	NA	NA	228303674	228304344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228303939_228304302
WTC11_00008391	chr1	+	7136	37	NNC	ENSG00000154358.23	novel	20499	81	NA	NA	-2585	-1241	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_3	13.0593079713803	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATCTCTTCACACTG	NA	False	NA	NA	False	NA	NA	NA	228306898	228359955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228307168_228307258_228307532_228308110_228308384_228309098_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317894_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
WTC11_00008392	chr1	+	4226	22	FSM	ENSG00000154358.23	ENST00000664957.1	4226	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	11.2880246781174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGGCAGCAGCCCCT	NA	False	NA	-38	True	NA	NA	NA	228333736	228361196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339941_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
WTC11_00008393	chr1	+	3097	12	FSM	ENSG00000154358.23	ENST00000664561.1	3097	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	13.4760270771887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTCTCTCAGCAAGAATA	228338863	False	NA	-21	True	NA	NA	NA	228338889	228361213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228351320_228351451_228352950_228353063_228356150_228356194_228359596
WTC11_00008395	chr1	+	617	2	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	230601180	True	NA	10	True	AATAAA	-14	NA	230601575	230609048	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_230601795_230608650
WTC11_00008397	chr1	+	6843	13	FSM	ENSG00000162946.23	ENST00000366637.8	6848	13	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_9	5.01386965216377	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATCTTGATGATTTT	231626493	True	NA	7	True	AATAAA	-18	NA	231626819	232041127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231626935_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328_231818518_231958827_231958889_232008784_232008984_232026434_232026553_232036691
WTC11_00008398	chr1	+	6779	12	FSM	ENSG00000162946.23	ENST00000622252.4	6927	12	5	143	5	0	multi-exon	FALSE	canonical	0	0	junction_8	5.34897843031115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATCTTGATGATTTT	231626493	True	NA	7	True	AATAAA	-18	NA	231626819	232041127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231626935_231693825_231694806_231701954_231702025_231749925_231750077_231770834_231771071_231795241_231795297_231800107_231800211_231818328_231818518_231958827_231958889_232008784_232009050_232026434_232026553_232036691
WTC11_00008399	chr1	+	7350	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41629	6267	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_3	13.7727085208393	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACCCATCCTCCAA	232118175	True	NA	2	True	AATAAA	-3	NA	232118461	232191910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
WTC11_00008400	chr1	+	584	4	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41622	-25386	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	16.3367343397905	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	232118182	False	NA	28	True	AATAAA	-21	NA	232118468	232160257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_232118714_232120570_232120730_232152075_232152169_232160170
WTC11_00008401	chr1	+	394	1	FSM	ENSG00000242794.2	ENST00000464573.2	280	1	-26	-88	-26	88	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTGATGTCAGAGGG	NA	False	NA	NA	False	NA	NA	NA	232222839	232223233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232222800_232223200
WTC11_00008408	chr1	+	4157	32	FSM	ENSG00000116984.15	ENST00000535889.6	4157	32	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_19	15.9175163170136	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTCTGTTCTCTTCGGA	236795671	True	NA	NA	False	NA	NA	NA	236795681	236898134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
WTC11_00008411	chr1	+	2501	17	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	-3	46	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	54.0451200387232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAAAAAGGCACATATT	NA	False	NA	58	True	NA	NA	NA	243256037	243500137	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
WTC11_00008413	chr1	+	518	3	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	104.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243485389	True	NA	12	True	AATAAA	-16	NA	243487766	243500091	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_243487822_243489013_243489141_243499755
WTC11_00008419	chr1	-	2420	10	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	183	4	intron_retention	FALSE	canonical	3	143	junction_2	73.8978273624393	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGCTTTTAATAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	29387	14399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_14830_14969_15039_15795_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18380_24737_24892_29320
WTC11_00008420	chr1	-	755	1	FSM	ENSG00000268903.1	ENST00000494149.2	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGCCTCACTGCGGCCT	-135882	False	NA	NA	False	NA	NA	NA	135895	135140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_135100_135900
WTC11_00008421	chr1	-	2830	4	Fusion	ENSG00000241860.7_ENSG00000269981.1_ENSG00000239906.1	novel	323	2	NA	NA	2284	0	multi-exon	FALSE	canonical	3	21	junction_3	44.1134900002256	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGGGCCTCCCGGCG	NA	False	NA	NA	False	NA	NA	NA	144547	137681	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_139697_139789_139848_142946_143012_143855
WTC11_00008423	chr1	-	571	2	NNC	ENSG00000241860.7	novel	1301	8	NA	NA	4081	6963	at_least_one_novel_splicesite	FALSE	canonical	3	234	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATTGCGAGTAGCT	NA	False	NA	NA	False	NA	NA	NA	164686	158527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_158675_164262
WTC11_00008424	chr1	-	1987	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4632	395	at_least_one_novel_splicesite	TRUE	canonical	3	121	junction_9	65.991287303704	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGAAGCTCCCAGCTG	-199961	False	NA	NA	False	NA	NA	NA	200043	184821	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187379_187578_187754_187891_188129_188267_188438_188585_188790_188890_195262_195417_199836
WTC11_00008428	chr1	-	7362	18	NNC	ENSG00000228327.4	novel	6432	16	NA	NA	-6	774	intron_retention	FALSE	canonical	2	6	junction_6	52.9525477983742	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGCGACAGAGCAAG	-777190	True	NA	NA	False	NA	NA	NA	778644	725110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_729805_733306_733365_735422_735614_736712_736771_743285_743351_743916_743974_744591_744826_746694_746819_753662_753853_756076_756142_758966_759124_764722_765248_766328_766388_768547_768614_769496_769713_772975_773108_774170_774281_778283
WTC11_00008430	chr1	-	1043	2	FSM	ENSG00000188290.11	ENST00000481869.1	1038	2	0	-5	0	1	multi-exon	FALSE	canonical	3	32	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCACGAGTTTTCTT	-999553	True	NA	2	True	NA	NA	NA	1000096	998960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525
WTC11_00008436	chr1	-	300	2	FSM	ENSG00000131584.19	ENST00000470659.1	421	2	121	0	121	0	multi-exon	FALSE	canonical	3	103	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCGCTGGCGGCGGCGC	NA	False	NA	NA	False	GGGGCT	-34	NA	1294887	1294498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1294629_1294717
WTC11_00008438	chr1	-	1167	4	FSM	ENSG00000162576.17	ENST00000474033.5	1171	4	0	4	0	-1	multi-exon	FALSE	canonical	3	47	junction_3	4.98887651569859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGTCCCAGGTATGC	-1354112	False	NA	-9	True	AATAAA	-17	NA	1354264	1352692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192
WTC11_00008439	chr1	-	2794	8	FSM	ENSG00000221978.13	ENST00000480479.5	2792	8	0	-2	0	2	multi-exon	FALSE	canonical	2	29	junction_4	560.001967926571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTCTCCTAATTTG	-1381208	False	NA	1	True	CATAAA	-19	NA	1391096	1385708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1388491_1388511_1388625_1388744_1390229_1390372_1390458_1390564_1390765
WTC11_00008440	chr1	-	4469	13	FSM	ENSG00000221978.13	ENST00000496007.5	4452	13	0	-17	0	0	multi-exon	FALSE	canonical	2	10	junction_4	493.977282428611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACGTGGTAGGTGGTCG	-1399299	False	14990	-4	True	AATAAA	-35	NA	1399309	1386481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1388625_1388744_1388949_1389048_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00008442	chr1	-	2035	7	ISM	ENSG00000221978.13	ENST00000400809.8	3112	11	5537	792	-1082	-1	3prime_fragment	FALSE	canonical	3	404	junction_6	288.494608075938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGACATCCGGAGCGT	-1383910	False	NA	-25	True	AATAAA	-14	NA	1393798	1386502	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395
WTC11_00008443	chr1	-	2414	12	NIC	ENSG00000221978.13	novel	1598	12	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	118	junction_6	315.469085334289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGACATCCGGAGCGT	-1399294	False	14990	-25	True	AATAAA	-14	NA	1399304	1386502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
WTC11_00008445	chr1	-	1370	2	ISM	ENSG00000235098.9	ENST00000537107.6	2024	4	983	2	798	-2	3prime_fragment	FALSE	canonical	3	15	junction_1	0	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTGTCTGAGAGGTT	-1420237	False	NA	0	True	AATAAA	-15	NA	1420293	1418421	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1419550_1420051
WTC11_00008447	chr1	-	5085	20	FSM	ENSG00000268575.1	ENST00000598846.1	5079	20	0	-6	0	6	multi-exon	FALSE	canonical	1	3	junction_18	75.5903084848984	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	-1737637	False	NA	NA	False	ATTAAA	-25	NA	1737688	1702729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703996_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707524_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722587_1722832_1734689_1734836_1735203
WTC11_00008449	chr1	-	4807	18	Fusion	ENSG00000078369.18_ENSG00000215790.8	novel	3163	12	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	1124.41919801824	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCAGAGGAACTTCCCA	-1890869	False	NA	NA	False	NA	NA	NA	1890966	1734689	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723_1746197_1785290_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
WTC11_00008450	chr1	-	3107	12	NIC	ENSG00000008130.15	novel	3098	12	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	202.787761053417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1778709	False	2602	NA	False	AATAAA	-20	NA	1778853	1751231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1753061_1753566_1753650_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1756778_1756883_1757180_1757311_1761951_1762036_1765227_1765447_1778745
WTC11_00008452	chr1	-	1856	11	NIC	ENSG00000078369.18	novel	3163	12	NA	NA	1	-1267	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	781.639744383562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAACAGTTAATCAAAACC	-1863092	True	NA	NA	False	TTTAAA	-16	NA	1891086	1786552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1825396_1825500_1839189_1839239_1890819
WTC11_00008453	chr1	-	722	5	NNC	ENSG00000162585.17	novel	727	4	NA	NA	0	64168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	531.249705882272	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTCAAGGGCTGATAT	-2181836	True	NA	NA	False	NA	NA	NA	2194739	2120292	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_2120321_2189547_2189782_2193638_2193911_2193997_2194134_2194687
WTC11_00008454	chr1	-	451	3	FSM	ENSG00000162585.17	ENST00000514625.1	703	3	252	0	252	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATCACCAGCACCGCT	-2203591	False	NA	NA	False	NA	NA	NA	2203630	2198062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2198143_2201049_2201226_2203435
WTC11_00008455	chr1	-	1641	14	FSM	ENSG00000116151.14	ENST00000378531.8	1645	14	0	4	0	-4	multi-exon	FALSE	canonical	2	9	junction_6	9.60399325231607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGAGGGCACTGCTCC	-2391461	False	NA	-5	True	AATAAA	-14	NA	2391554	2321256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2321580_2324096_2324144_2336468_2336549_2336716_2336851_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
WTC11_00008456	chr1	-	252	1	FSM	ENSG00000272161.1	ENST00000607720.1	493	1	126	115	126	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACCCCGCTTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	2326567	2326315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2326300_2326600
WTC11_00008457	chr1	-	526	4	FSM	ENSG00000116151.14	ENST00000419785.1	582	4	56	0	56	0	multi-exon	FALSE	canonical	1	2	junction_1	12.2565175405668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAAGTGCTGGGATT	-2384972	False	NA	NA	False	NA	NA	NA	2385065	2371675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2371906_2372480_2372592_2374460_2374558_2384977
WTC11_00008460	chr1	-	611	3	FSM	ENSG00000157911.11	ENST00000508384.5	611	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	110.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGCTACATGTTGCCTG	-2413003	True	NA	NA	False	NA	NA	NA	2413797	2408529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2408859_2410370_2410452_2413596
WTC11_00008461	chr1	-	8511	34	NIC	ENSG00000162591.16	novel	7443	37	NA	NA	0	5	intron_retention	FALSE	canonical	2	9	junction_12	19.3308633360914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATACTAAATAGTATTTT	-3609600	True	NA	14	True	ATTAAA	-34	NA	3611508	3487945	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3490590_3490911_3490960_3492638_3492768_3493770_3493900_3493995_3494125_3494370_3494500_3494612_3494742_3495889_3496019_3496654_3496784_3497232_3497362_3498370_3498500_3498697_3498827_3499137_3499267_3499587_3499717_3499795_3500765_3500965_3501095_3501176_3501922_3505207_3505343_3505421_3505557_3506107_3506237_3507794_3507924_3508557_3508690_3509074_3509246_3509869_3509993_3510782_3510903_3511549_3511688_3512005_3512129_3514549_3514673_3515401_3515528_3524123_3524247_3579824_3579930_3595337_3595448_3602465_3602601_3611137
WTC11_00008464	chr1	-	3842	6	NIC	ENSG00000227372.12	novel	2816	6	NA	NA	-19	-76	intron_retention	FALSE	canonical	2	7	junction_1	74.1458023086945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAAGGCCTGGGCCCCA	-3741594	True	NA	NA	False	NA	NA	NA	3747392	3736483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3736559_3736925_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
WTC11_00008465	chr1	-	1888	6	NIC	ENSG00000227372.12	novel	2529	6	NA	NA	120	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	86.8631106972344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGCTGAAAGCACTCAC	-3740796	False	NA	-14	True	TTTAAA	-21	NA	3746594	3737146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3737855_3740232_3740388_3742803_3742961_3743060_3743191_3745606_3746187_3746436
WTC11_00008470	chr1	-	1705	5	NNC	ENSG00000198912.12	novel	1779	5	NA	NA	-4	52656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.398365220604	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGTGGCAGAGGGGAGGC	-3896662	True	NA	NA	False	NA	NA	NA	3900297	3836468	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3836494_3889122_3890074_3890568_3891058_3892882_3892997_3900171
WTC11_00008471	chr1	-	1133	7	NNC	ENSG00000116198.14	novel	1661	4	NA	NA	0	1284	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	32.86335345031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGTTATTTTGATTTA	-3853956	True	NA	-15	True	AATAAA	-5	NA	3857198	3841824	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3842068_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
WTC11_00008474	chr1	-	2946	20	FSM	ENSG00000131697.18	ENST00000622020.4	3004	20	15	43	-11	-43	multi-exon	TRUE	canonical	1	2	junction_1	9.06394641719266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGGAGAAATGGAGAGA	-5991338	True	NA	NA	False	NA	NA	NA	5992458	5879547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_5879633_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905781_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154_5986328_5992243
WTC11_00008475	chr1	-	3374	5	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.663404672501	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-6226720	True	NA	-4	True	AATAAA	-22	NA	6235972	6221192	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6222154_6223412_6225263_6231901_6232120_6234885_6234975_6235716
WTC11_00008476	chr1	-	4277	21	NNC	ENSG00000171680.23	novel	3695	21	NA	NA	-101	57116	intron_retention	FALSE	non_canonical	0	0	junction_1	29.0370022557426	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAGACAGGGTCTCA	-6485559	False	NA	NA	False	NA	NA	NA	6485570	6410005	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6410036_6467125_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
WTC11_00008477	chr1	-	326	3	FSM	ENSG00000069812.11	ENST00000489730.1	730	3	12	392	2	-392	multi-exon	TRUE	canonical	2	3	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGAGCCCTCCCTGCC	-6419716	False	NA	NA	False	NA	NA	NA	6419905	6419240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6419341_6419606_6419703_6419775
WTC11_00008483	chr1	-	1428	7	NIC	ENSG00000162408.11	novel	6627	12	NA	NA	0	-52	intron_retention	FALSE	canonical	3	40	junction_5	13.7042167071145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGAGTTACCTTAGCC	-6550399	False	NA	NA	False	NA	NA	NA	6550488	6532046	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395
WTC11_00008484	chr1	-	4923	4	NIC	ENSG00000162413.17	novel	4487	4	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	22.5141930543577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGAGTCATTGCCTTT	-6602030	True	NA	-11	True	AATAAA	-14	NA	6602855	6590725	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6594111_6595484_6595558_6599046_6599453_6601796
WTC11_00008485	chr1	-	1845	1	FSM	ENSG00000270171.1	ENST00000602640.1	1721	1	-139	15	-139	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTTTGTAAATTGCT	-7694915	False	NA	NA	False	ATTAAA	-3	NA	7694983	7693138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_7693100_7695000
WTC11_00008486	chr1	-	1138	1	FSM	ENSG00000270035.1	ENST00000602973.1	570	1	-636	68	-636	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGCCAGGACAGCTTT	-7699440	False	NA	NA	False	NA	NA	NA	7699508	7698370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_7698400_7699500
WTC11_00008487	chr1	-	2744	4	Genic_Genomic	ENSG00000269978.1	novel	267	1	NA	NA	-3538	308	multi-exon	FALSE	canonical	2	12	junction_1	1.63299316185545	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTAAAAATAAGAGCAAG	-7704440	False	NA	NA	False	AGTAAA	-37	NA	7704508	7700395	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_7701024_7701618_7701725_7702381_7703231_7703347
WTC11_00008491	chr1	-	1800	13	NNC	ENSG00000074800.16	novel	1781	12	NA	NA	0	43173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6500.58046553451	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAGAGATCCCGCCTC	-8636993	True	NA	NA	False	ATTAAA	-35	NA	8878686	8817826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_8817856_8861008_8861429_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
WTC11_00008493	chr1	-	3971	1	FSM	ENSG00000284357.1	ENST00000385130.1	110	1	-172	-3689	-172	3689	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGCAGCCAATGCCCTTA	NA	False	NA	32	True	ATTAAA	-40	NA	9151949	9147978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9148000_9151900
WTC11_00008494	chr1	-	4608	18	NNC	ENSG00000171603.18	novel	4760	19	NA	NA	0	26425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.641275446763	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTCTTTCCTTGGAA	-9815477	True	NA	NA	False	NA	NA	NA	9823965	9702500	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9702539_9729028_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
WTC11_00008495	chr1	-	4760	19	FSM	ENSG00000171603.18	ENST00000377298.9	4760	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_17	222.91702492183	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCTTTTCATCTG	-9815477	True	NA	83	True	CATAAA	-16	NA	9823965	9728925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9756480_9756511_9773271_9773395_9823642
WTC11_00008496	chr1	-	579	1	FSM	ENSG00000271989.1	ENST00000607572.1	797	1	9	209	9	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGTGTATCTTGCAAAA	-10430572	True	NA	NA	False	NA	NA	NA	10430668	10430089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10430100_10430700
WTC11_00008497	chr1	-	1334	9	NNC	ENSG00000116649.10	novel	1260	8	NA	NA	-40	25889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	902.343260281252	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGATAGTAATATATTA	-11040471	True	NA	NA	False	AAAAAG	-12	NA	11060060	11028694	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11028727_11054588_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
WTC11_00008498	chr1	-	2015	13	FSM	ENSG00000171824.14	ENST00000474216.5	2007	13	0	-8	0	5	multi-exon	FALSE	canonical	1	1	junction_11	238.921346309245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTTTTATTTTGTT	-11081204	False	NA	NA	False	ATTAAA	-22	NA	11081217	11066612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070989_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11077652_11079710_11079823_11080498_11080515_11080763_11080913_11081081
WTC11_00008499	chr1	-	8745	58	NNC	ENSG00000198793.13	novel	8721	58	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_57	52.7365794719797	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATATGAGTGGCGTTT	-11254220	True	NA	-10	True	AATAAA	-21	NA	11262550	11106536	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259451_11262444
WTC11_00008500	chr1	-	1327	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	0	3390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.310205417024	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAATAAAATTGA	-11653066	True	NA	NA	False	AAAAAG	-4	NA	11654429	11644996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11645027_11648376_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
WTC11_00008501	chr1	-	976	3	FSM	ENSG00000116661.11	ENST00000471501.1	725	3	0	-251	0	251	multi-exon	FALSE	canonical	3	359	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCCCACCCCACCTCCC	-11650650	False	NA	NA	False	NA	NA	NA	11650713	11649276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11649875_11649944_11650075_11650465
WTC11_00008502	chr1	-	1047	10	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	0	9268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1183.37903928424	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTAGGCCTGGTGGCCC	-11669679	True	NA	NA	False	AAAAAG	-4	NA	11681111	11665211	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11665244_11674480_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
WTC11_00008503	chr1	-	1841	3	FSM	ENSG00000177000.13	ENST00000641437.1	1911	3	48	22	6	-22	multi-exon	FALSE	canonical	3	18	junction_2	0.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGATCACCTGAGGTCA	-11805111	True	NA	NA	False	NA	NA	NA	11805958	11799878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11801400_11802880_11803130_11805887
WTC11_00008504	chr1	-	1045	5	FSM	ENSG00000116809.12	ENST00000479282.5	1054	5	9	0	6	0	multi-exon	FALSE	canonical	3	40	junction_2	7.22841614740048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGCAGAGCAGACAG	-15974734	True	NA	NA	False	NA	NA	NA	15976095	15945845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
WTC11_00008505	chr1	-	4483	15	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	2007	250	2007	-250	3prime_fragment	FALSE	canonical	3	143	junction_13	31.3470533719206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16210628	False	NA	-7	True	AATAAA	-17	NA	16210645	16198103	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642
WTC11_00008506	chr1	-	1957	3	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	47775	103	37337	-103	3prime_fragment	FALSE	canonical	3	45	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGGATTGTTTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	16565712	16562421	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16564187_16564806_16564919_16565632
WTC11_00008507	chr1	-	3179	21	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	21148	4017	10710	-1483	internal_fragment	TRUE	canonical	3	7	junction_9	13.8296782319763	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTCAATTTCATGTTT	NA	False	NA	NA	False	AAAACA	-4	NA	16592339	16566335	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16566460_16567178_16567352_16567978_16568031_16569072_16569237_16573141_16573194_16574486_16574693_16575156_16575230_16576266_16576482_16577316_16577420_16579192_16579403_16580744_16580957_16581419_16581493_16582543_16582759_16583593_16583697_16585488_16585699_16587049_16587262_16587724_16587798_16588848_16589064_16589898_16590002_16591846_16592057_16592158
WTC11_00008508	chr1	-	2410	2	ISM	ENSG00000219481.11	ENST00000449853.2	2755	3	4892	11	8	-11	3prime_fragment	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTATAAGTCATTTTC	-16605882	False	NA	-14	True	AATAAA	-14	NA	16608642	16605416	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16607692_16608507
WTC11_00008509	chr1	-	3271	13	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-32	548	combination_of_known_splicesites	TRUE	canonical	3	39	junction_11	27.4195793792198	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCATTAAAATGCAAAGAAA	-16642335	True	NA	NA	False	AATAAA	-9	NA	16644718	16617704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644645
WTC11_00008510	chr1	-	2761	14	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_13	27.294362944035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	-16642289	True	NA	-4	True	AATAAA	-26	NA	16644672	16618252	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
WTC11_00008514	chr1	-	571	3	FSM	ENSG00000268869.6	ENST00000414828.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTAGTAGGTAACTAT	NA	False	NA	NA	False	AATACA	-5	NA	16692309	16687338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16687523_16691112_16691295_16692104
WTC11_00008515	chr1	-	3623	8	FSM	ENSG00000186715.11	ENST00000455405.6	3184	8	-533	94	-114	-94	multi-exon	FALSE	canonical	2	5	junction_5	8.9259996296076	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTATATTGTCATAAC	-16759375	False	NA	NA	False	AAGAAA	-9	NA	16759405	16755003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758089_16758215_16758294_16758465_16758587_16758674_16758712_16758802
WTC11_00008516	chr1	-	429	3	FSM	ENSG00000186715.11	ENST00000544155.1	592	3	0	163	0	-163	multi-exon	FALSE	canonical	3	11	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCTCCCTTGTGTTTG	-16758793	False	NA	NA	False	AGTAAA	-43	NA	16758823	16758215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16758587_16758674_16758712_16758802
WTC11_00008517	chr1	-	3714	28	NIC	ENSG00000159363.19	novel	3981	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_24	90.0601231886328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	-16999146	False	NA	-2	True	AATAAA	-20	NA	17005714	16985957	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004409_17004706_17004822_17005013_17005073_17005373_17005557_17005683
WTC11_00008518	chr1	-	805	6	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_3	3.57770876399966	238	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCGTCTTCTGGCCTC	-18298033	True	NA	NA	False	CATAAA	-28	NA	18298322	18289265	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_18289531_18290503_18290631_18291054_18291248_18291738_18291800_18295686_18295763_18298239
WTC11_00008519	chr1	-	3152	16	NNC	ENSG00000159423.17	novel	3139	15	NA	NA	0	48959	intron_retention	FALSE	non_canonical	0	0	junction_1	46.5071559607288	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGCGGTGGCTCA	-18899417	True	NA	NA	False	AAAAAG	-18	NA	18902528	18822470	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_18822514_18871432_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
WTC11_00008520	chr1	-	1596	1	ISM	ENSG00000169991.11	ENST00000455833.7	6179	9	50801	0	6117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTTTTTTTTGTTTTT	NA	False	NA	1	True	AATAAA	-21	NA	18905875	18904279	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_18904300_18905900
WTC11_00008524	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	759.630823265039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-19456769	True	NA	-65	True	AAGAAA	-36	NA	19485485	19338822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
WTC11_00008525	chr1	-	774	4	NNC	ENSG00000162542.14	novel	2403	16	NA	NA	-42	-6811	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.0146142626022	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTACTTTCTTTG	-19799926	False	NA	NA	False	AATAAA	-22	NA	19799987	19778156	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19778519_19780579_19780767_19787025_19787118_19799854
WTC11_00008526	chr1	-	474	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	36	0	-36	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCTAAGAATTATACAAT	-20186446	True	NA	NA	False	ATTAAA	-28	NA	20186486	20184277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20184625_20186359
WTC11_00008527	chr1	-	2875	3	Fusion	ENSG00000162545.6_ENSG00000289402.1	novel	2326	2	NA	NA	-520	25035	multi-exon	TRUE	non_canonical	0	0	junction_1	26	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTTATCTTTTGAACA	-20486591	True	NA	NA	False	NA	NA	NA	20486730	20457355	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_20457384_20482389_20483720_20485213
WTC11_00008531	chr1	-	524	5	FSM	ENSG00000189410.12	ENST00000519434.1	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.7658998979362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCTCAAGATCTACAGCG	-20730724	False	NA	NA	False	NA	NA	NA	20731175	20727031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20727076_20727522_20727604_20727957_20728087_20730745_20730852_20731011
WTC11_00008532	chr1	-	4062	13	NNC	ENSG00000127483.19	novel	6406	13	NA	NA	18	0	intron_retention	FALSE	canonical	2	27	junction_11	154.794756586477	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-20787279	False	NA	-24	True	AATAAA	-16	NA	20787289	20742681	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749976_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779909_20780344_20780541_20787194
WTC11_00008534	chr1	-	5417	33	FSM	ENSG00000075151.24	ENST00000374935.7	5567	33	0	150	0	37	multi-exon	FALSE	canonical	1	2	junction_23	63.7475183340497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCCATTCCTGGGGG	-21168810	True	NA	4	True	AGTAAA	-29	NA	21176888	20806441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00008536	chr1	-	5296	33	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	81.1626453487071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTCCTTTGGA	-21168756	True	NA	-27	True	AATAAA	-29	NA	21176834	20806472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00008537	chr1	-	6035	33	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	56.2582979990508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTCCTTTGGA	-21168769	True	NA	-27	True	AATAAA	-29	NA	21176847	20806472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00008538	chr1	-	6335	35	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	13	6	combination_of_known_junctions	FALSE	canonical	3	14	junction_30	67.1558895020361	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTCCTTTGGA	-21168793	True	NA	-27	True	AATAAA	-29	NA	21176871	20806472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001325_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
WTC11_00008539	chr1	-	1081	1	FSM	ENSG00000233072.1	ENST00000420703.1	385	1	-288	-408	-288	408	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGTAGTCCCAGCTACTC	NA	False	NA	NA	False	AAAAAG	-30	NA	21004222	21003141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21003100_21004200
WTC11_00008540	chr1	-	810	1	Genic_Genomic	ENSG00000227001.3	novel	NA	NA	NA	NA	3103	570	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATCAATACTTAGGAAG	NA	False	NA	NA	False	NA	NA	NA	21424864	21424054	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_21424100_21424900
WTC11_00008542	chr1	-	3654	27	NNC	ENSG00000090686.16	novel	3228	27	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_16	74.4452461514919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	-21782930	False	NA	-24	True	AATAAA	-21	NA	21782991	21678902	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721164_21721649_21721765_21723897_21724096_21728565_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
WTC11_00008545	chr1	-	3029	3	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	2	1683	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAAACCTGCTTATG	-23217005	True	NA	NA	False	AATAAA	-22	NA	23217500	23190211	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23190514_23192484_23195002_23217290
WTC11_00008546	chr1	-	2698	12	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	514.815252106669	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCCATGTTGCAGTATG	-23319132	True	NA	NA	False	NA	NA	NA	23344295	23256010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256047_23309787_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
WTC11_00008547	chr1	-	2533	11	NNC	ENSG00000125944.21	novel	2694	11	NA	NA	0	47760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	470.567370309502	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCCATGTTGCAGTATG	-23319132	True	NA	NA	False	NA	NA	NA	23344295	23256010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256048_23309787_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
WTC11_00008550	chr1	-	4247	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	71.2222533692946	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-23481781	True	NA	-3	True	AATAAA	-18	NA	23484184	23428562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433361_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435722_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
WTC11_00008551	chr1	-	4127	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	54.7768199149969	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-23481789	True	NA	-3	True	AATAAA	-18	NA	23484192	23428562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433361_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
WTC11_00008554	chr1	-	1932	6	FSM	ENSG00000117305.15	ENST00000513148.1	2011	6	0	79	0	-79	multi-exon	FALSE	canonical	3	240	junction_1	33.8738837454461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGGAGGCTGAGAAAGGAG	-23824009	True	NA	NA	False	NA	NA	NA	23825416	23809365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
WTC11_00008555	chr1	-	1368	4	NNC	ENSG00000188529.15	novel	7656	6	NA	NA	-67340	33961	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTATGGTGGCTCAAGC	NA	False	NA	NA	False	AAAAAG	-1	NA	24048267	23930385	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23930414_23969079_23970373_23989625_23989646_24048240
WTC11_00008556	chr1	-	2266	7	NNC	ENSG00000188529.15	novel	2839	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	643.21086917295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAATGTTTTGGATTCC	-23943684	True	NA	-9	True	AATAAA	-16	NA	23980331	23966451	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23967724_23971572_23971624_23971845_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
WTC11_00008557	chr1	-	2436	7	NIC	ENSG00000001460.18	novel	2726	9	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	24.7184141886165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-24412782	True	NA	-1	True	ATTAAA	-22	NA	24413713	24356998	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24401318_24401457_24413673
WTC11_00008560	chr1	-	480	1	FSM	ENSG00000224183.1	ENST00000414693.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGACTTCCTACTTT	NA	False	NA	NA	False	NA	NA	NA	25294643	25294163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25294200_25294600
WTC11_00008561	chr1	-	2874	2	FSM	ENSG00000117616.18	ENST00000568399.1	629	2	-1014	-1231	-34	1231	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATGATGGGCCAGCTC	NA	False	NA	NA	False	GGGGCT	-17	NA	25338247	25303155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25304822_25337039
WTC11_00008562	chr1	-	1134	1	Genic_Genomic	ENSG00000182749.6	novel	NA	NA	NA	NA	8730	94	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGCAGGGAGCAGTTCT	NA	False	NA	92	True	NA	NA	NA	25862523	25861389	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_25861400_25862500
WTC11_00008564	chr1	-	3216	9	NIC	ENSG00000158006.14	novel	3487	11	NA	NA	3	-9	combination_of_known_junctions	TRUE	canonical	2	4	junction_7	25.3808490795718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAAGAAGTTGTTGG	-25997136	True	NA	-16	True	AAAAAG	-7	NA	25998052	25959775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25990726_25990864_25998024
WTC11_00008567	chr1	-	1399	13	NNC	ENSG00000158062.21	novel	1555	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	24	junction_1	31.2608869924632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305448	True	NA	NA	False	AATAAA	-18	NA	26306632	26282280	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_26282329_26282352_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26306591
WTC11_00008574	chr1	-	1600	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-31	11204	2	2	5prime_fragment	FALSE	canonical	3	58	junction_13	12.050277327658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCTATTATTTTCTAGC	-28086127	True	NA	-15	True	AATAAA	-16	NA	28088595	27988476	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
WTC11_00008575	chr1	-	538	3	Genic_Genomic	ENSG00000228589.3	novel	681	1	NA	NA	-17	11147	multi-exon	FALSE	non_canonical	0	0	junction_1	39	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-28096411	True	NA	NA	False	NA	NA	NA	28096439	28084594	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_28084629_28095728_28096018_28096224
WTC11_00008576	chr1	-	4102	3	FSM	ENSG00000169403.12	ENST00000539896.1	4191	3	74	15	11	-15	multi-exon	FALSE	canonical	1	1	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTAAATTAAGTCAC	-28193770	True	NA	-16	True	AATAAA	-5	NA	28193862	28147180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28151060_28176591_28176674_28193721
WTC11_00008577	chr1	-	1528	10	Fusion	ENSG00000169403.12_ENSG00000126698.11	novel	1600	10	NA	NA	0	373	multi-exon	FALSE	non_canonical	0	0	junction_1	821.089805767799	60	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAGACTGGGTTAGGA	-28209831	True	NA	NA	False	AAAAAG	-26	NA	28233020	28149299	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_28149353_28200556_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
WTC11_00008578	chr1	-	1003	1	FSM	ENSG00000270605.1	ENST00000604716.1	1945	1	936	6	936	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATGATTGTTTCTTGA	NA	False	NA	-5	True	AATAAA	-12	NA	28240517	28239514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28239500_28240500
WTC11_00008579	chr1	-	5280	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	100.173953010141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTTATTTTAACC	-31052333	True	NA	-1	True	AATACA	-17	NA	31065695	30931504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
WTC11_00008580	chr1	-	5381	22	NNC	ENSG00000134644.16	novel	5360	22	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_19	95.8291658366247	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTTATTTTAACC	-31052359	True	NA	-1	True	AATACA	-17	NA	31065721	30931504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007100_31028795_31028865_31059203_31059578_31065615
WTC11_00008581	chr1	-	5384	22	NNC	ENSG00000134644.16	novel	5375	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_14	117.149186820862	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052342	True	NA	-2	True	AATACA	-16	NA	31065704	30931505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980179_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007100_31028795_31028865_31059203_31059578_31065615
WTC11_00008582	chr1	-	865	5	FSM	ENSG00000162517.13	ENST00000489164.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	118.309974220266	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTACTGCCCACGCTCT	-31644569	False	NA	NA	False	NA	NA	NA	31644589	31630788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644379
WTC11_00008583	chr1	-	742	3	FSM	ENSG00000162517.13	ENST00000496805.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	153.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCATGAAGGAGCTAAAG	-31644535	False	NA	NA	False	NA	NA	NA	31644555	31633239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31633315_31635221_31635523_31644189
WTC11_00008584	chr1	-	2315	15	FSM	ENSG00000084636.18	ENST00000488897.5	2423	15	108	0	108	0	multi-exon	FALSE	canonical	2	5	junction_5	9.81382822805636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACAGGTTGTGAATG	-31663334	False	NA	-20	True	AATAAA	-20	NA	31663348	31652587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656097_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586
WTC11_00008585	chr1	-	522	10	FSM	ENSG00000084636.18	ENST00000470799.5	826	10	304	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	5.4794791137502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGAACCACTTTTGT	-31666067	False	NA	NA	False	NA	NA	NA	31666081	31660584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036
WTC11_00008586	chr1	-	5423	30	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	-11	14	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	23.1034482758621	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTCCCTCAGGTAA	-31763346	True	NA	3	True	AATAAA	-29	NA	31764351	31727102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31742837_31743003_31744192_31744358_31744647_31744732_31755998_31756816_31763883
WTC11_00008588	chr1	-	1381	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	0	2799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	624.541075955422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCACCCCGATCGATGGT	-31938023	False	161	NA	False	NA	NA	NA	31938042	31903621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_31903650_31908651_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
WTC11_00008590	chr1	-	1538	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.7812395251364	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	-32221839	True	NA	-5	True	AATATA	-13	NA	32222333	32214476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
WTC11_00008592	chr1	-	3063	6	FSM	ENSG00000220785.8	ENST00000690989.1	2666	6	-400	3	-364	0	multi-exon	FALSE	canonical	3	12	junction_3	11.6721891691319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	NA	False	NA	-3	True	AATAAA	-18	NA	32242074	32231659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32231970_32232041_32232185_32234703_32234815_32234951_32235114_32239294_32239426_32239868
WTC11_00008593	chr1	-	1603	4	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	0	63147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6339.44799559779	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGCACGATGGCTCATT	-32269764	True	NA	NA	False	AAAAAG	-1	NA	32336233	32270691	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32270719_32297777_32297808_32333838_32335098_32335946
WTC11_00008596	chr1	-	748	6	FSM	ENSG00000121900.19	ENST00000474144.5	748	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	88.8828442389193	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGATTCCTGGAGCT	-32900339	True	NA	NA	False	NA	NA	NA	32901352	32894740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32894880_32895304_32895440_32895554_32895645_32895909_32895970_32898125_32898320_32901222
WTC11_00008598	chr1	-	1371	1	FSM	ENSG00000278997.1	ENST00000622988.1	1360	1	-124	113	-124	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCTCCAAAAAAAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	33143354	33141983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33142000_33143400
WTC11_00008599	chr1	-	1463	8	FSM	ENSG00000134686.20	ENST00000467894.5	1466	8	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_5	15.3343684950785	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGGAGGGGCAGAGAG	-33349291	True	NA	NA	False	NA	NA	NA	33349881	33324688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33331624_33331700_33332274_33332405_33334184_33334293_33349596
WTC11_00008600	chr1	-	3346	1	Genic_Genomic	ENSG00000121904.19	novel	NA	NA	NA	NA	56019	772	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTACTTCTGAATATAT	NA	False	NA	NA	False	AATAGA	-19	NA	33516571	33513225	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_33513200_33516600
WTC11_00008601	chr1	-	749	5	FSM	ENSG00000121904.19	ENST00000465819.1	749	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.54950975679639	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAATGCCTGGCCAGCG	NA	False	NA	NA	False	GGGGCT	-6	NA	33572590	33559352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33559474_33567592_33567767_33569373_33569548_33571531_33571727_33572505
WTC11_00008602	chr1	-	7192	48	NNC	ENSG00000121904.19	novel	13655	71	NA	NA	238	10999	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_21	11.4904254826681	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTCATCTGATCACGC	-34164981	False	NA	NA	False	NA	NA	NA	34164992	33580807	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_33580900_33583641_33583831_33586503_33586618_33587087_33587169_33600864_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485_33626582_33633421_33633536_33635213_33635331_33636359_33636555_33646647_33646836_33652322_33652462_33657980_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088_33709259_33714586_33714776_33716285_33716502_33724196_33724314_33724515_33724705_33725348_33725537_33726546_33726686_33739139_33739335_33743279_33743607_33772568_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
WTC11_00008603	chr1	-	918	2	FSM	ENSG00000163866.9	ENST00000456842.1	918	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTCACTTTGGGGCA	-34851534	True	NA	93	True	NA	NA	NA	34859755	34855168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34855983_34859651
WTC11_00008605	chr1	-	5355	13	NIC	ENSG00000116560.11	novel	3740	10	NA	NA	407	0	combination_of_known_junctions	FALSE	canonical	3	205	junction_3	829.248099016345	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35192725	False	NA	-8	True	AATAAA	-17	NA	35192738	35176379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35176472_35177318_35177400_35177988_35178037_35181134_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
WTC11_00008606	chr1	-	4951	21	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	-11	2	combination_of_known_junctions	TRUE	canonical	3	20	junction_20	59.8074201082107	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGCTGGGTGTGCT	-35552027	True	NA	-5	True	ATTAAA	-20	NA	35557416	35433489	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557047
WTC11_00008611	chr1	-	1312	6	NNC	ENSG00000054116.12	novel	1282	5	NA	NA	0	35682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.650282927811	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAATGCTATGCTAAG	-36146451	True	NA	NA	False	NA	NA	NA	36149486	36100887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_36100918_36136571_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
WTC11_00008612	chr1	-	929	9	NNC	ENSG00000116898.12	novel	953	8	NA	NA	0	46754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	576.142546923068	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAATTCAAGGCTCCTG	-36443054	True	NA	NA	False	NA	NA	NA	36464384	36408963	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_36408996_36455773_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
WTC11_00008614	chr1	-	470	3	FSM	ENSG00000134697.13	ENST00000463351.1	493	3	23	0	23	0	multi-exon	FALSE	canonical	3	658	junction_2	21.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCATACAAAGTTGTCA	-37587758	False	NA	NA	False	NA	NA	NA	37594069	37590778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37590846_37592711_37592807_37593761
WTC11_00008615	chr1	-	2674	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	112.034313939971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686724	True	NA	0	True	AATAAA	-13	NA	37690504	37681569	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
WTC11_00008616	chr1	-	2389	20	ISM	ENSG00000204084.13	ENST00000373024.8	4450	24	2	7804	0	0	5prime_fragment	FALSE	non_canonical	0	0	junction_13	88.3189573486169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTGTGTTTAAGCATT	-37946111	True	NA	NA	False	NA	NA	NA	37947051	37868500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
WTC11_00008618	chr1	-	704	7	FSM	ENSG00000183431.12	ENST00000470585.5	704	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	564.485606548121	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATGGTTGTGTTGTGA	-37968485	True	NA	NA	False	TTTAAA	-20	NA	37989995	37979390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37989547_37989596_37989869
WTC11_00008620	chr1	-	4533	4	FSM	ENSG00000116983.13	ENST00000372844.8	4600	4	66	1	66	-1	multi-exon	FALSE	canonical	2	3	junction_3	0.942809041582063	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGGGCTCCTGCTCTTC	-39691305	False	NA	-4	True	AATAAA	-13	NA	39691367	39678648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39682734_39683936_39684153_39684441_39684612_39691305
WTC11_00008621	chr1	-	563	4	FSM	ENSG00000131238.18	ENST00000372775.2	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	52	junction_3	729.023090626536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTCAGTTTTAGAAAAG	-40078801	False	NA	NA	False	NA	NA	NA	40078835	40073815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40078811
WTC11_00008623	chr1	-	1408	8	FSM	ENSG00000117016.10	ENST00000372683.1	1408	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	23.5597373603739	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGTGGACATGACTC	-40664240	False	NA	41	True	AAGAAA	-10	NA	40665445	40626213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647763_40665393
WTC11_00008624	chr1	-	3247	15	FSM	ENSG00000010803.16	ENST00000372597.5	3252	15	0	5	0	-3	multi-exon	FALSE	canonical	1	10	junction_10	20.7552550513092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTGTCTTTTTAA	-41241558	True	NA	-33	True	AATAAA	-10	NA	41242116	41027206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
WTC11_00008626	chr1	-	5215	12	NNC	ENSG00000198815.9	novel	5106	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	39.2331450360723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-42329992	True	NA	-12	True	AATAAA	-19	NA	42335215	42176547	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278785_42311049_42311111_42335058
WTC11_00008627	chr1	-	1519	8	FSM	ENSG00000066185.13	ENST00000372565.8	1530	8	11	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1.48461497791618	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTATTCTTAATTCC	-42455982	True	NA	NA	False	AATAAA	-17	NA	42456011	42430328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42448466_42448639_42449917_42450060_42455887
WTC11_00008629	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	-42913895	True	NA	NA	False	AATAAA	-13	NA	42958859	42951615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42951931_42958633
WTC11_00008630	chr1	-	277	1	FSM	ENSG00000284138.1	ENST00000639582.1	440	1	60	103	60	-103	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGCCTAGAAGCCCGG	-42952548	False	NA	NA	False	NA	NA	NA	42952581	42952304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42952300_42952600
WTC11_00008631	chr1	-	232	3	NNC	ENSG00000117395.13	novel	741	9	NA	NA	197	-20608	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCAGCAGGAACTGATCA	-43270547	False	NA	NA	False	NA	NA	NA	43270739	43215291	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_43215394_43261841_43261919_43270686
WTC11_00008632	chr1	-	368	2	Genic_Genomic	ENSG00000233514.1	novel	360	1	NA	NA	-27	104	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAGGAAAAGACAT	NA	False	NA	NA	False	AATAAA	-21	NA	44122539	44122048	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_44122299_44122421
WTC11_00008633	chr1	-	1373	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	0	54341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	493.131352290893	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACATAGACATGAAAG	-44347557	True	NA	NA	False	NA	NA	NA	44355249	44166728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44166755_44221093_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
WTC11_00008634	chr1	-	1713	10	NNC	ENSG00000117419.16	novel	1417	10	NA	NA	0	21009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.200944773226	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTGTAGGTACCTGTTG	-44347546	True	NA	NA	False	NA	NA	NA	44355238	44200060	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44200084_44221093_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
WTC11_00008635	chr1	-	1684	5	NIC	ENSG00000142959.5	novel	2512	9	NA	NA	1946	1	intron_retention	FALSE	canonical	1	2	junction_2	13.235841491949	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTAGTTTTTGTTTA	-44786210	False	NA	-8	True	AATATA	-19	NA	44786224	44783583	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44784484_44784628_44784986_44785107_44785306_44785598_44785677_44786073
WTC11_00008636	chr1	-	3629	22	NNC	ENSG00000126107.15	novel	3597	21	NA	NA	0	23918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1641500918011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTGGGGGAATGCA	-45008782	True	NA	NA	False	NA	NA	NA	45011324	44978621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44978654_45002547_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
WTC11_00008638	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	72.7554808931946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45337812	True	NA	-2	True	AGTAAA	-20	NA	45339970	45329241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
WTC11_00008645	chr1	-	3020	10	FSM	ENSG00000070759.17	ENST00000486676.5	3019	10	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.4461537450178	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-45490349	True	NA	-1	True	AATAAA	-17	NA	45491161	45343882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45421724_45421847_45457563_45457872_45490851
WTC11_00008648	chr1	-	561	4	FSM	ENSG00000280670.3	ENST00000629670.1	919	4	0	358	0	-358	multi-exon	FALSE	canonical	3	11	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTTGGAAGGTAGGAC	-45499733	False	NA	NA	False	NA	NA	NA	45499853	45496568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45496624_45497298_45497384_45499344_45499444_45499531
WTC11_00008650	chr1	-	997	6	NNC	ENSG00000117450.15	novel	1234	6	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	1	165	junction_5	2848.65874404078	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	-45523142	False	NA	-14	True	ATTAAA	-28	NA	45523177	45511035	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45523084
WTC11_00008651	chr1	-	1145	6	NNC	ENSG00000117450.15	novel	945	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	471	junction_5	2726.41402578552	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTTATTTTAGGAAG	-45293119	True	NA	-23	True	ATTAAA	-19	NA	45521884	45511044	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521634
WTC11_00008652	chr1	-	552	1	FSM	ENSG00000234329.1	ENST00000437848.1	788	1	-37	273	-37	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGTAAAATGGGGGTC	-45651846	False	NA	NA	False	NA	NA	NA	45651863	45651311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45651300_45651900
WTC11_00008655	chr1	-	2727	22	NNC	ENSG00000085998.15	novel	2719	22	NA	NA	-7	6	intron_retention	FALSE	canonical	2	6	junction_17	96.5343687695812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGATTGTGATTTTGTGT	-46195313	True	NA	-5	True	ATTAAA	-26	NA	46198418	46188676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195943_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
WTC11_00008656	chr1	-	2815	21	NIC	ENSG00000085998.15	novel	2719	22	NA	NA	10	6	intron_retention	FALSE	canonical	3	360	junction_13	33.9203478755746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGATTGTGATTTTGTGT	-46195319	True	NA	-5	True	ATTAAA	-26	NA	46198424	46188676	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
WTC11_00008657	chr1	-	827	7	FSM	ENSG00000132128.18	ENST00000496156.5	892	7	0	65	0	-65	multi-exon	FALSE	canonical	1	1	junction_1	206.263316068455	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAACAGAAAAGGTGTAA	NA	False	NA	NA	False	NA	NA	NA	46281161	46261260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46261405_46267494_46267678_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124
WTC11_00008658	chr1	-	631	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	228.01754318473	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46298194	True	NA	3	True	AATAAA	-22	NA	46303263	46296741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_46297075_46297562_46297634_46298283_46298371_46303123
WTC11_00008659	chr1	-	2396	10	NIC	ENSG00000079277.22	novel	2719	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	54.3216301869968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-46602446	True	NA	-11	True	AATAAA	-13	NA	46604230	46557417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46576574_46576655_46583227_46583330_46594112_46594281_46604184
WTC11_00008660	chr1	-	2583	13	NIC	ENSG00000079277.22	novel	2719	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	42.2238577899588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-46602459	True	NA	-11	True	AATAAA	-13	NA	46604243	46557417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
WTC11_00008661	chr1	-	429	4	FSM	ENSG00000123472.12	ENST00000492233.5	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308.541011140425	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATAAATGTGTGGGGCA	-46645246	False	NA	NA	False	NA	NA	NA	46645256	46633677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46633829_46635896_46635971_46643193_46643302_46645160
WTC11_00008669	chr1	-	4170	13	ISM	ENSG00000085832.17	ENST00000371733.8	5163	25	97175	151	13	-151	3prime_fragment	FALSE	canonical	3	99	junction_11	15.5152254969827	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAATTTGCAATTGAGTT	-51422001	True	NA	-16	True	AATAAA	-16	NA	51422091	51354413	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785
WTC11_00008670	chr1	-	3641	32	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	0	21257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.41677615139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTTAATTCTCTTTTAA	-51860301	True	NA	NA	False	AAAAAG	-3	NA	51878727	51767933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51767964_51789192_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
WTC11_00008671	chr1	-	3889	34	NNC	ENSG00000078618.23	novel	3895	33	NA	NA	0	21257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	327.351163440262	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTTAATTCTCTTTTAA	-51860345	True	NA	NA	False	AAAAAG	-3	NA	51878771	51767933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51767964_51789192_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
WTC11_00008672	chr1	-	3668	32	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	0	21257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.41677615139	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTTAATTCTCTTTTAA	-51860345	True	NA	NA	False	AAAAAG	-3	NA	51878771	51767933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51767964_51789209_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
WTC11_00008674	chr1	-	207	1	FSM	ENSG00000228407.2	ENST00000414059.2	340	1	135	-2	135	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAGAAAAATAAAGTC	NA	False	NA	NA	False	NA	NA	NA	52160465	52160258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52160300_52160500
WTC11_00008675	chr1	-	3163	18	NNC	ENSG00000085840.13	novel	3121	17	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	77.2451272805043	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTGAAGTTATTACAT	-52399448	True	NA	-1	True	ATTAAA	-20	NA	52404402	52372827	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52394553_52394616_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
WTC11_00008676	chr1	-	3013	16	NIC	ENSG00000085840.13	novel	3121	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	60.5058674840713	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGAAGTTATTACA	-52399469	True	NA	-2	True	ATTAAA	-19	NA	52404423	52372828	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
WTC11_00008678	chr1	-	4913	14	ISM	ENSG00000134744.14	ENST00000371544.7	5858	30	88810	134	-1378	-6	3prime_fragment	FALSE	canonical	3	26	junction_5	57.6516780010032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATGAAGATTCAGATTT	NA	False	NA	-14	True	AATAAA	-10	NA	52464290	52423408	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436976_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711
WTC11_00008679	chr1	-	5535	31	NNC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	56.5864530313278	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATGAAGATTCAGATTT	-52548793	True	NA	-14	True	AATAAA	-10	NA	52553082	52423408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52424003_52425348_52425508_52431012_52431224_52431316_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481843_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
WTC11_00008681	chr1	-	535	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	0	51282	multi-exon	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACCATAACATACTGG	-52772632	False	NA	NA	False	AAAAAG	-18	NA	52772648	52720911	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_52720948_52772149
WTC11_00008682	chr1	-	524	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	0	25508	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGATCTTTATTTTTT	-52772632	False	NA	NA	False	AAAACA	-41	NA	52772648	52746685	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_52746716_52772154
WTC11_00008683	chr1	-	543	4	NIC	ENSG00000121310.17	novel	663	5	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	30.092450142113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52911588	False	NA	-18	True	ATTAAA	-6	NA	52911604	52896231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52896598_52899173_52899225_52907867_52907955_52911565
WTC11_00008684	chr1	-	1030	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	25.9213882218322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920697	True	NA	-18	True	ATTAAA	-6	NA	52921677	52896231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
WTC11_00008687	chr1	-	1036	1	FSM	ENSG00000236360.2	ENST00000414168.1	502	1	-166	-368	-166	368	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCTACTGTTACTCTA	NA	False	NA	NA	False	NA	NA	NA	52993868	52992832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52992800_52993900
WTC11_00008688	chr1	-	359	3	FSM	ENSG00000162385.11	ENST00000462941.1	738	3	0	379	0	-379	multi-exon	FALSE	canonical	3	1158	junction_1	64	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACCCCCCACACTCCC	-53223537	True	NA	NA	False	NA	NA	NA	53238508	53233500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53233653_53235576_53235636_53238360
WTC11_00008689	chr1	-	4752	19	NNC	ENSG00000058804.12	novel	4552	18	NA	NA	0	21563	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	140.218579368071	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCACTGCCAAATCCAAGA	-53838436	False	NA	NA	False	NA	NA	NA	53838463	53743914	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_53743935_53765464_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
WTC11_00008690	chr1	-	1907	12	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	121.855693003468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887587	True	NA	-18	True	AATAAA	-27	NA	53889780	53851718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53882942_53883032_53883112_53883277_53888906_53888987_53889243_53889464_53889712
WTC11_00008691	chr1	-	804	1	FSM	ENSG00000219102.3	ENST00000437410.2	1063	1	339	-80	339	80	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTCCCACATGCATTAG	NA	False	NA	NA	False	NA	NA	NA	53975692	53974888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53974900_53975700
WTC11_00008692	chr1	-	386	1	FSM	ENSG00000280378.1	ENST00000624679.1	1755	1	1131	238	1131	-238	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAAAATGCTGGGATTA	-54033718	False	NA	NA	False	NA	NA	NA	54033749	54033363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54033400_54033700
WTC11_00008693	chr1	-	4074	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-111	27742	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAGGCATCTAAATTA	-54836451	False	NA	NA	False	AAAAAG	-2	NA	54887007	54821884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821918_54849630_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00008694	chr1	-	4068	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-111	27742	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAGGCATCTAAATTA	-54836451	False	NA	NA	False	AAAAAG	-2	NA	54887007	54821884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821918_54849636_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00008695	chr1	-	4067	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-111	27742	intron_retention	FALSE	non_canonical	0	0	junction_1	703.958139187548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAGGCATCTAAATTA	-54836451	False	NA	NA	False	AAAAAG	-2	NA	54887007	54821884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821917_54849636_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
WTC11_00008696	chr1	-	5440	16	NNC	ENSG00000173406.16	novel	5301	15	NA	NA	-355	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_15	27.9944438931887	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTAGCCTGGCTTTAT	-57424266	True	NA	-2	True	AATAAA	-15	NA	57424415	56994780	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57033522_57033574_57062883_57062944_57069359_57069426_57071022_57071062_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57424193
WTC11_00008697	chr1	-	373	4	FSM	ENSG00000162600.12	ENST00000467509.5	389	4	0	16	0	-16	multi-exon	FALSE	canonical	0	0	junction_1	79.6715479676124	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAAAACCTTCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	58530662	58415399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58415486_58506059_58506210_58527260_58527336_58530600
WTC11_00008698	chr1	-	1949	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	43.7914089748206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545572	True	NA	1	True	AATAAA	-19	NA	58546801	58480718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
WTC11_00008699	chr1	-	4901	14	NNC	ENSG00000162601.11	novel	3176	17	NA	NA	1753	-712	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	73.5568853651063	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTTAACATTGGCACAG	-58687891	False	NA	NA	False	TATAAA	-12	NA	58687909	58659924	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_58660156_58661169_58661225_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668429_58668567_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152
WTC11_00008700	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	-59078063	False	NA	NA	False	NA	NA	NA	59078116	59055998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_59056186_59059637_59059683_59078031
WTC11_00008701	chr1	-	292	1	FSM	ENSG00000270457.1	ENST00000604999.1	338	1	-48	94	-48	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTGTCAGTTTTAT	-59289590	False	NA	NA	False	NA	NA	NA	59289688	59289396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_59289400_59289700
WTC11_00008702	chr1	-	982	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	105.651549917642	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	-61721176	True	NA	-6	True	AATAAA	-16	NA	61725115	61681047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
WTC11_00008703	chr1	-	938	7	NIC	ENSG00000162604.12	novel	1250	7	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	111.157545852722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTTAGTGCTTTGTT	-61721187	True	NA	-8	True	AATAAA	-14	NA	61725126	61681049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724954
WTC11_00008705	chr1	-	1044	5	NNC	ENSG00000230798.6	novel	1019	4	NA	NA	17	36550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	727.992273310644	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAATAAAATGAACAGCC	-63319573	True	NA	NA	False	NA	NA	NA	63322436	63284327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63284353_63320886_63321191_63321366_63321464_63321583_63322081_63322315
WTC11_00008706	chr1	-	1244	4	NNC	ENSG00000230798.6	novel	1019	4	NA	NA	17	36550	intron_retention	FALSE	non_canonical	0	0	junction_1	751.890210661696	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAATAAAATGAACAGCC	-63319573	True	NA	NA	False	NA	NA	NA	63322436	63284327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63284354_63320881_63321191_63321366_63321464_63321624
WTC11_00008707	chr1	-	1050	5	NNC	ENSG00000230798.6	novel	1019	4	NA	NA	17	36550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	727.992273310644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAATAAAATGAACAGCC	-63319573	True	NA	NA	False	NA	NA	NA	63322436	63284327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63284354_63320881_63321191_63321366_63321464_63321583_63322081_63322315
WTC11_00008708	chr1	-	788	4	FSM	ENSG00000230798.6	ENST00000685680.1	837	4	49	0	34	0	multi-exon	FALSE	canonical	0	0	junction_1	374.102778509982	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63322404	False	NA	-43	True	AATAAA	-24	NA	63322419	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664_63321945_63322315
WTC11_00008709	chr1	-	1257	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-771	6	17	0	multi-exon	FALSE	canonical	0	0	junction_1	848	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321583
WTC11_00008710	chr1	-	981	4	FSM	ENSG00000230798.6	ENST00000690254.1	1019	4	38	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	741.285819820308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321624_63322081_63322315
WTC11_00008711	chr1	-	1110	12	NNC	ENSG00000142856.17	novel	1044	10	NA	NA	0	65359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.511562271341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGGGGTGGTGGCACAT	-63518847	True	NA	NA	False	NA	NA	NA	63523182	63375410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63375438_63440771_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
WTC11_00008712	chr1	-	1067	11	NNC	ENSG00000142856.17	novel	1044	10	NA	NA	0	55585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.355204867908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGTAAAAGATCTTAA	-63518847	True	NA	NA	False	NA	NA	NA	63523182	63385184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63385217_63440769_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
WTC11_00008713	chr1	-	2044	8	NIC	ENSG00000142856.17	novel	961	9	NA	NA	6	1140	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	187.012386362672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGATATACTAAGCTT	-63518884	True	NA	NA	False	ATTAAA	-20	NA	63523219	63439629	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63441104_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
WTC11_00008716	chr1	-	2056	2	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATACCTGCTGTGTGTC	-65051323	False	NA	-7	True	AATATA	-5	NA	65051333	65048342	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_65048925_65049859
WTC11_00008718	chr1	-	300	1	FSM	ENSG00000234144.1	ENST00000428703.1	226	1	-164	90	-164	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAAGGCATATGCAG	NA	False	NA	NA	False	NA	NA	NA	65299144	65298844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_65298800_65299100
WTC11_00008719	chr1	-	3450	9	NNC	ENSG00000142864.15	novel	6681	8	NA	NA	0	33034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1504.02330745737	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCTGGGTGGCTCAC	-67331846	True	NA	NA	False	AAAAAG	-2	NA	67430402	67374775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_67374806_67411052_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424960_67425082_67425224_67426134_67426286_67429987
WTC11_00008724	chr1	-	1199	3	NNC	ENSG00000225087.2	novel	1122	5	NA	NA	8	-107321	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	5.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAAGGCCTTTATTAA	-72898587	True	NA	NA	False	AATAAA	-16	NA	72899132	72891331	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_72892310_72898766_72898884_72899028
WTC11_00008725	chr1	-	308	3	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	3.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTTAAAAACTCACCA	-72984945	False	NA	-18	True	AATAAA	-5	NA	72984979	72965161	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_72965311_72969291_72969364_72984892
WTC11_00008726	chr1	-	872	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCTTTTCTGGAGG	-72984145	True	NA	NA	False	NA	NA	NA	72985250	72984378	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_72984400_72985200
WTC11_00008727	chr1	-	487	1	FSM	ENSG00000272864.1	ENST00000608748.1	565	1	-20	98	-20	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATCACTATAGCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	74699353	74698866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74698900_74699400
WTC11_00008730	chr1	-	5867	21	NIC	ENSG00000162613.17	novel	2201	21	NA	NA	0	5	intron_retention	FALSE	canonical	3	109	junction_1	174.701023179602	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGTGTTTTTTAT	-77964813	True	NA	96	True	AATAAA	-25	NA	77979110	77944049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77945643_77946529_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
WTC11_00008732	chr1	-	2985	15	FSM	ENSG00000162618.15	ENST00000370742.4	3539	15	53	501	28	266	multi-exon	FALSE	canonical	0	0	junction_4	2.86872651828903	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGTATATTTGAATCCT	-79006618	False	NA	NA	False	NA	NA	NA	79006677	78890264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_78891217_78891523_78891693_78893097_78893190_78917633_78917701_78917829_78918051_78920182_78920387_78921612_78921787_78926885_78927092_78936294_78936412_78937806_78937991_78938099_78938280_78939187_78939259_78946273_78946427_79005069_79005220_79006632
WTC11_00008733	chr1	-	7424	20	FSM	ENSG00000137941.17	ENST00000480174.5	7828	20	0	404	0	-404	multi-exon	FALSE	canonical	1	1	junction_5	5.69929771637118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAATTAGTAATAAGG	NA	False	NA	NA	False	NA	NA	NA	83952381	83865431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_83870083_83882962_83883137_83890320_83890482_83904078_83904160_83906328_83906524_83907455_83907662_83911164_83911364_83917603_83917691_83919698_83919835_83921086_83921161_83921246_83921395_83929135_83929231_83933607_83933767_83937851_83938017_83942462_83942680_83947123_83947283_83948627_83948696_83949864_83949987_83951844_83951977_83952186
WTC11_00008734	chr1	-	6106	14	NNC	ENSG00000117155.17	novel	2457	15	NA	NA	-56	77	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_13	50.4365557294127	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCATGAATCTATGCATG	-84690514	False	NA	NA	False	NA	NA	NA	84690524	84643628	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656003_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
WTC11_00008736	chr1	-	583	2	FSM	ENSG00000153898.13	ENST00000530971.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATTTATGACATGATC	NA	False	NA	NA	False	AATAAA	-15	NA	84929844	84926425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84926722_84929557
WTC11_00008737	chr1	-	3309	4	FSM	ENSG00000055732.13	ENST00000474447.1	2727	4	-586	4	-586	-4	multi-exon	FALSE	canonical	3	24	junction_2	5.35412613473634	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTTTTGATGAAGTAA	NA	False	NA	-4	True	ATTAAA	-12	NA	85024106	85018086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298
WTC11_00008740	chr1	-	4261	11	NNC	ENSG00000117174.11	novel	6080	11	NA	NA	286	-1706	intron_retention	FALSE	canonical	1	2	junction_2	47.6362257111119	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATAACTATAATGCCAAC	-85703687	False	NA	-131	True	ATTAAA	-9	NA	85708147	85651128	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_85654099_85657846_85657972_85662221_85662278_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
WTC11_00008742	chr1	-	1322	8	NNC	ENSG00000137947.12	novel	1599	7	NA	NA	0	68500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.7985215918571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGCATCTCCCAAAAG	-88890585	True	NA	NA	False	NA	NA	NA	88891567	88784132	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_88784155_88852931_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
WTC11_00008743	chr1	-	1933	14	FSM	ENSG00000137944.18	ENST00000446900.6	1937	14	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_10	93.5092312628061	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88988235	False	NA	0	True	AATAAA	-23	NA	88988351	88935772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964555_88964713_88964828_88964979_88968669_88968815_88969408_88969468_88988251
WTC11_00008744	chr1	-	2989	2	FSM	ENSG00000233593.11	ENST00000606660.1	2786	2	-20	-183	-3	183	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAGTAATTTTAAATTG	-90851277	True	NA	NA	False	NA	NA	NA	90851638	90829363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90851482
WTC11_00008746	chr1	-	3984	2	FSM	ENSG00000122482.22	ENST00000482709.1	540	2	-1915	-1529	-1915	36	multi-exon	FALSE	canonical	3	274	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACTTCAGGTTGTGTT	NA	False	NA	NA	False	ATTAAA	-38	NA	90920306	90915261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051
WTC11_00008747	chr1	-	6271	8	NNC	ENSG00000122482.22	novel	5541	6	NA	NA	0	36	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	92.4118995783198	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACTTCAGGTTGTGTT	-91022014	False	NA	NA	False	ATTAAA	-38	NA	91022035	90915261	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_90916991_90918051_90918155_90935407_90935531_90937484_90938091_90938271_90941310_90982309_90982371_91020636_91021202_91021989
WTC11_00008749	chr1	-	1962	13	NNC	ENSG00000174842.17	novel	2006	19	NA	NA	-59	673	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	136.988746496443	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAGGTCTAATTATTT	NA	False	NA	58	True	TATAAA	-31	NA	92271711	92245728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_92246647_92247061_92247145_92247877_92247990_92251180_92251233_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464
WTC11_00008751	chr1	-	773	8	FSM	ENSG00000223745.8	ENST00000668257.1	773	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	10.3490115864428	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGACAACAGTCTAATGCT	-93344920	True	NA	-9	True	AATAAA	-20	NA	93345799	93264644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93264773_93305387_93305471_93324634_93324730_93325768_93325896_93339356_93339537_93339648_93339680_93340457_93340511_93345723
WTC11_00008752	chr1	-	255	1	FSM	ENSG00000229567.1	ENST00000423010.1	169	1	93	-179	93	179	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGCCTTTCATTAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	93279036	93278781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93278800_93279000
WTC11_00008755	chr1	-	3447	6	NNC	ENSG00000223745.8	novel	752	6	NA	NA	-3	4733	intron_retention	FALSE	canonical	2	3	junction_1	10.403845442912	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGGCTAGCATTTCA	-93344907	True	NA	-4	True	ATTAAA	-23	NA	93345786	93332241	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_93333464_93337376_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
WTC11_00008758	chr1	-	3217	14	FSM	ENSG00000137936.18	ENST00000370244.5	3217	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	19.9282737504922	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	-93847137	False	NA	3	True	AATACA	-14	NA	93847150	93561790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93706091_93706143_93845566_93845713_93847069
WTC11_00008760	chr1	-	451	2	FSM	ENSG00000224081.10	ENST00000424711.1	532	2	81	0	81	0	multi-exon	FALSE	canonical	2	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAACATCACAAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	94742414	94732132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94732438_94742268
WTC11_00008761	chr1	-	2013	8	NNC	ENSG00000117519.16	novel	1991	7	NA	NA	0	56665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1135.62339258925	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAGAAAAAGAAAAGA	-94908475	True	NA	NA	False	NA	NA	NA	94927110	94840283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_94840309_94896959_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
WTC11_00008762	chr1	-	1346	1	ISM	ENSG00000156869.14	ENST00000646001.2	6971	17	57878	3442	3751	1291	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAGGAAGTCATACTTT	NA	False	NA	-13	True	AATAAA	-26	NA	99708757	99707411	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_99707400_99708800
WTC11_00008763	chr1	-	3604	3	FSM	ENSG00000224616.4	ENST00000665523.1	3637	3	33	0	1	0	multi-exon	FALSE	canonical	1	4	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGATGCAGGAAAAGGA	-100265836	True	NA	NA	False	TTTAAA	-43	NA	100266119	100261862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100265248_100265814_100265918_100266003
WTC11_00008764	chr1	-	2159	9	FSM	ENSG00000117543.22	ENST00000370105.7	2159	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	155.893994432114	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTTCTTCT	-101021456	True	NA	3	True	AATAAA	-23	NA	101025762	100989622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101022934_101023330_101025308_101025467_101025664
WTC11_00008765	chr1	-	1619	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	113.273636238388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTTTATAATTTTCT	-101021436	True	NA	0	True	AATAAA	-20	NA	101025742	100989625	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_100990632_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
WTC11_00008766	chr1	-	1057	2	Genic_Genomic	ENSG00000183298.5	novel	880	1	NA	NA	-80	25954	multi-exon	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGATCTTAAAAAATGCC	NA	False	NA	NA	False	ACTAAA	-36	NA	101787299	101760385	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_101760400_101786256
WTC11_00008768	chr1	-	2624	13	NIC	ENSG00000121940.17	novel	7129	13	NA	NA	4	0	intron_retention	TRUE	canonical	1	1	junction_12	62.4083772866717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGTACAAATAATACAAAA	-108961129	True	NA	-33	True	AATACA	-40	NA	108963438	108931828	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962465_108963360
WTC11_00008769	chr1	-	2474	13	FSM	ENSG00000121940.17	ENST00000675654.1	2494	13	20	0	0	0	multi-exon	FALSE	canonical	1	8	junction_11	56.7259493823888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGCCATTGTGCCC	-108961175	True	NA	NA	False	NA	NA	NA	108963484	108932014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108962308_108962470_108963360
WTC11_00008770	chr1	-	1605	5	NNC	ENSG00000197780.11	novel	814	4	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061673	True	NA	-4	True	AATAAA	-32	NA	109076003	109062485	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109063494_109064356_109064694_109066134_109066233_109074986_109075066_109075920
WTC11_00008771	chr1	-	1604	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	33	-4	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	164.833868126768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATATCTGGAAGTCGAT	-109276805	True	NA	-16	True	AATAAA	-22	NA	109283082	109279560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
WTC11_00008772	chr1	-	1103	6	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	200.297378914453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATATCTGGAAGTCGA	-109276863	True	NA	-17	True	AATAAA	-21	NA	109283140	109279561	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109282679_109282732_109283062
WTC11_00008773	chr1	-	1758	8	NNC	ENSG00000134222.16	novel	1584	8	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	193.249547878131	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATATCTGGAAGTCGA	-109276868	True	NA	-17	True	AATAAA	-21	NA	109283145	109279561	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109280157_109280395_109280490_109280776_109281009_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
WTC11_00008774	chr1	-	1742	8	NIC	ENSG00000134222.16	novel	1730	8	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	167.03195343822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276811	True	NA	-20	True	AATAAA	-18	NA	109283088	109279564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283027
WTC11_00008775	chr1	-	1683	8	NIC	ENSG00000134222.16	novel	1717	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	152.981524828247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276856	True	NA	-20	True	AATAAA	-18	NA	109283133	109279564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
WTC11_00008776	chr1	-	1683	8	NNC	ENSG00000134222.16	novel	1826	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	191.143924831526	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276865	True	NA	-20	True	AATAAA	-18	NA	109283142	109279564	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109280157_109280395_109280490_109280776_109281009_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
WTC11_00008777	chr1	-	1743	8	NIC	ENSG00000134222.16	novel	1710	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	155.863886196926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276867	True	NA	-40	True	NA	NA	NA	109283144	109279584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
WTC11_00008778	chr1	-	7043	20	NNC	ENSG00000134243.12	novel	6990	20	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_8	115.025060499598	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGACTAAGCTACAGT	-109392297	True	NA	-9	True	AATAAA	-29	NA	109397970	109309569	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327157_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
WTC11_00008780	chr1	-	765	7	FSM	ENSG00000134202.12	ENST00000488824.1	1118	7	353	0	353	0	multi-exon	FALSE	canonical	3	25	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTCCAGCTGAGTTT	-109739662	False	NA	-7	True	AATGAA	-14	NA	109739948	109736975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832
WTC11_00008781	chr1	-	839	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	8105	-22786	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	8	258	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGCTAACACAAGTGAGC	-110330727	False	NA	-23	True	GGGGCT	-32	NA	110331048	110315045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110315752_110318764_110318883_110331033
WTC11_00008783	chr1	-	1770	3	NNC	ENSG00000121931.16	novel	3313	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	24.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-110960430	True	NA	-11	True	NA	NA	NA	110963910	110947189	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110948397_110949850_110950124_110963620
WTC11_00008785	chr1	-	1783	9	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	82.4298944558344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTCAAGAGCTTCTT	-111136388	True	NA	-9	True	AATAAA	-8	NA	111140093	111117337	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
WTC11_00008787	chr1	-	2148	10	ISM	ENSG00000085465.13	ENST00000369732.4	2196	11	644	9	644	-9	3prime_fragment	FALSE	canonical	0	0	junction_9	4.73755680118397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGAACCCACCGAGTT	NA	False	NA	-12	True	AATAAA	-7	NA	111427091	111414327	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_111415345_111416322_111416459_111419609_111419727_111421275_111421462_111421564_111421674_111422926_111423052_111423542_111423709_111425382_111425440_111426436_111426642_111427061
WTC11_00008788	chr1	-	2060	1	FSM	ENSG00000260948.1	ENST00000564771.1	2023	1	-41	4	-41	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCTTTGCGTACTTG	-111433056	False	NA	NA	False	AATAAA	-13	NA	111433109	111431049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111431000_111433100
WTC11_00008789	chr1	-	1359	1	FSM	ENSG00000284830.1	ENST00000625113.1	1763	1	-269	673	-269	-673	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCCTACCCCCTTGAC	-111755782	True	NA	NA	False	NA	NA	NA	111755806	111754447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111754400_111755800
WTC11_00008790	chr1	-	3986	14	NIC	ENSG00000007341.19	novel	4255	15	NA	NA	0	-135	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	36.5882252214025	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGATCTGAGGGACA	-112615870	True	NA	NA	False	AAGAAA	-45	NA	112619126	112523652	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
WTC11_00008791	chr1	-	993	4	FSM	ENSG00000007341.19	ENST00000467335.5	990	4	0	-3	0	-1	multi-exon	FALSE	canonical	1	1	junction_3	63.9079198708753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTTTGTGATATTTTG	NA	False	NA	0	True	AATAAA	-20	NA	112619774	112610455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112611004_112616812_112616896_112618908_112619140_112619643
WTC11_00008793	chr1	-	2634	10	NIC	ENSG00000155367.16	novel	2474	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	36	junction_9	77.5730639262984	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTATTTGCTTTGACT	-112714054	True	NA	NA	False	AATAAA	-20	NA	112715328	112709991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714057
WTC11_00008794	chr1	-	1857	9	NIC	ENSG00000155367.16	novel	1714	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	224	junction_4	26.3616672462119	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTCTGTATTTGCT	-112714052	True	NA	NA	False	AATAAA	-14	NA	112715326	112709997	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714975
WTC11_00008797	chr1	-	3144	6	NNC	ENSG00000155380.13	novel	3849	6	NA	NA	0	39816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	498.244919693116	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACTAGGAAGAGATAAAG	-112956019	False	NA	NA	False	AAAAAG	-2	NA	112956063	112872030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112872063_112912354_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
WTC11_00008799	chr1	-	2356	14	NNC	ENSG00000116793.16	novel	3657	19	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	72.3288021558616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	-113758252	True	NA	-8	True	AATAAA	-16	NA	113759468	113705764	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113749505_113749590_113757698_113757756_113758658_113758734_113759022
WTC11_00008800	chr1	-	2971	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	111	2749	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	42.4996732013579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATTTTTCCTCCAAAAC	-113757828	False	NA	-4	True	AATAAA	-13	NA	113759044	113746772	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113749590_113757698_113757756_113758658_113758734_113759022
WTC11_00008801	chr1	-	6460	8	NNC	ENSG00000081019.14	novel	2418	7	NA	NA	0	9445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.5491194611753	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAGTAACAAATGAATG	-113810044	True	NA	NA	False	NA	NA	NA	113812289	113752386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113752418_113761836_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
WTC11_00008802	chr1	-	1961	4	FSM	ENSG00000134262.13	ENST00000479285.5	1940	4	0	-21	0	21	multi-exon	FALSE	canonical	3	80	junction_1	9.80929264637478	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACTATTACACTTTCT	-113900206	False	NA	17	True	AATAAA	-38	NA	113900245	113895034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113896466_113897839_113897944_113898717_113898802_113899903
WTC11_00008803	chr1	-	1857	7	FSM	ENSG00000134262.13	ENST00000369567.5	2144	7	0	287	0	21	multi-exon	FALSE	canonical	1	2	junction_6	34.1829229619443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACTATTACACTTTCT	-113904789	False	NA	17	True	AATAAA	-38	NA	113904828	113895034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604
WTC11_00008804	chr1	-	1774	2	FSM	ENSG00000134262.13	ENST00000462591.1	2661	2	887	0	887	0	multi-exon	FALSE	canonical	3	91	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGCTTGTCTAGAGT	-113897013	False	NA	-8	True	AATAAA	-13	NA	113897052	113895059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113896039_113896257
WTC11_00008808	chr1	-	3483	7	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	0	713	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	173.530977061734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTCCTTCTGGAAGTGA	-114151434	False	NA	NA	False	NA	NA	NA	114152957	114090060	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114092083_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
WTC11_00008809	chr1	-	3612	5	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	3	-4984	intron_retention	FALSE	canonical	3	411	junction_4	44.7241545476267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCATGGCCCCTCGGC	-114151391	False	NA	NA	False	AATAAA	-13	NA	114152914	114096748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
WTC11_00008810	chr1	-	8446	21	NNC	ENSG00000197323.12	novel	8369	20	NA	NA	0	4921	intron_retention	FALSE	non_canonical	0	0	junction_1	40.5081473286548	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTGTCAAGGTGGG	-114508829	True	NA	NA	False	NA	NA	NA	114511160	114387868	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114387986_114392786_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
WTC11_00008811	chr1	-	7378	1	FSM	ENSG00000177551.5	ENST00000369506.1	7226	1	171	-323	171	8	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTAAGCACACTGT	NA	False	NA	-13	True	AATAAA	-22	NA	115843746	115836368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_115836400_115843700
WTC11_00008812	chr1	-	677	4	FSM	ENSG00000134253.10	ENST00000497970.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	33.008416435139	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117115581	False	NA	-14	True	AATAAA	-22	NA	117115612	117111059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574
WTC11_00008813	chr1	-	206	1	FSM	ENSG00000271427.1	ENST00000604156.1	575	1	141	228	141	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCACTCTTCTAAAGGC	-117365234	False	NA	NA	False	AATGAA	-25	NA	117365332	117365126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117365100_117365300
WTC11_00008814	chr1	-	228	1	FSM	ENSG00000226443.3	ENST00000433816.1	998	1	887	-117	887	117	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGCAGACCCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	119533859	119533631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119533600_119533900
WTC11_00008815	chr1	-	3404	1	FSM	ENSG00000260941.1	ENST00000562811.1	1570	1	-1843	9	-1843	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTCTCTGGTTTATC	NA	False	NA	NA	False	ATTAAA	-20	NA	119601114	119597710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119597700_119601100
WTC11_00008816	chr1	-	2231	2	FSM	ENSG00000265808.4	ENST00000618538.1	2230	2	0	-1	0	1	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTGCAGTGCTGCTC	-120160488	False	27	0	True	AATAAA	-20	NA	120160501	120157289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120159403_120160383
WTC11_00008817	chr1	-	2180	13	NNC	ENSG00000275131.3	novel	6897	42	NA	NA	-9193	-7884	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	21.0627369752577	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCTTTCAAAATAG	-120557443	False	NA	NA	False	NA	NA	NA	120557550	120536270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_120536403_120538322_120538405_120538570_120538736_120541891_120542087_120543016_120543197_120543946_120544085_120544266_120544381_120545280_120545440_120548288_120548502_120548715_120548734_120548972_120549093_120550144_120550277_120557018
WTC11_00008818	chr1	-	697	1	FSM	ENSG00000272583.1	ENST00000609485.1	464	1	-264	31	-264	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAAAGATATTTTAAAT	-121518948	False	NA	-38	True	NA	NA	NA	121519093	121518396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121518400_121519100
WTC11_00008819	chr1	-	221	1	FSM	ENSG00000273213.4	ENST00000392948.5	468	1	183	64	-1	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGGGAGCGGGCCTAAGG	-143905770	True	NA	NA	False	NA	NA	NA	143905794	143905573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_143905600_143905800
WTC11_00008820	chr1	-	5013	23	NNC	ENSG00000266338.7	novel	4862	22	NA	NA	3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.1693005721254	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCATTTCCATGTTTA	-144460952	True	NA	NA	False	AATAAA	-2	NA	144461644	144421403	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426451_144427046_144427099_144427817_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450871_144456536_144456806_144458846_144459037_144459365_144459484_144460842_144460962_144461380
WTC11_00008824	chr1	-	1793	5	NNC	ENSG00000131779.11	novel	1620	4	NA	NA	-143	3591	intron_retention	FALSE	non_canonical	0	0	junction_1	51.3097213011336	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGACCTTTTCAGACA	-145886925	False	NA	NA	False	AAAAAG	-1	NA	145918860	145907758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907789_145911349_145912567_145916816_145917019_145917700_145917817_145918632
WTC11_00008825	chr1	-	508	1	FSM	ENSG00000201558.1	ENST00000364688.1	164	1	17	-361	17	361	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCCTGCGTTCAAGC	-146051732	True	NA	NA	False	NA	NA	NA	146052227	146051719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146051700_146052200
WTC11_00008827	chr1	-	539	1	FSM	ENSG00000244371.2	ENST00000497012.2	543	1	-112	116	-112	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCCACAGCTTTGCCCG	NA	False	NA	NA	False	NA	NA	NA	146957771	146957232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146957200_146957800
WTC11_00008828	chr1	-	1354	1	FSM	ENSG00000230832.3	ENST00000438469.2	1241	1	-13	-100	-13	100	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCTGTGAGAAAGGAAAA	-147083357	False	NA	NA	False	TTTAAA	-31	NA	147083591	147082237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147082200_147083600
WTC11_00008829	chr1	-	5514	9	NNC	ENSG00000131791.8	novel	5343	8	NA	NA	-68	13226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.3893447939513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAACATGAAAAGGCAG	-147172557	False	NA	NA	False	NA	NA	NA	147172618	147141879	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_147141906_147155108_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
WTC11_00008830	chr1	-	6181	5	NIC	ENSG00000131791.8	novel	5343	8	NA	NA	-4456	8	intron_retention	FALSE	canonical	3	17	junction_1	54.71288696459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGATTGATGACTGATT	-147166905	False	NA	NA	False	AATAAA	-27	NA	147166966	147155097	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_147160834_147161711_147161781_147162439_147162574_147166497_147166619_147166845
WTC11_00008832	chr1	-	1555	6	FSM	ENSG00000162836.12	ENST00000392988.6	1555	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	68.1351597928705	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGACCCAGATCCACTG	-147669031	False	NA	NA	False	NA	NA	NA	147670278	147651973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147669829
WTC11_00008833	chr1	-	3168	2	FSM	ENSG00000265107.3	ENST00000579774.3	3177	2	9	0	9	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTTGTTGTCCACT	-147760576	False	NA	-2	True	AATAAA	-18	NA	147760593	147756198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147759272_147760498
WTC11_00008834	chr1	-	1350	7	FSM	ENSG00000215859.9	ENST00000425209.1	1350	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.14087209644419	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAAGTAATAGCTTT	-148009575	False	NA	NA	False	NA	NA	NA	148009592	147994300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147994355_147995595_147995887_147996522_147996748_148001318_148001516_148003786_148003983_148005372_148005510_148009342
WTC11_00008835	chr1	-	5086	22	NNC	ENSG00000263956.8	novel	5494	24	NA	NA	9	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.1060451316297	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAATTAATAAAAACATTTC	-148151613	True	NA	72	True	NA	NA	NA	148152313	148102072	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148124898_148125002_148126828_148127039_148135671_148136038_148137710_148137742_148151916
WTC11_00008836	chr1	-	3621	4	NNC	ENSG00000263956.8	novel	2973	22	NA	NA	9	-28190	intron_retention	FALSE	canonical	0	0	junction_3	10.2089285540757	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	-148151613	True	NA	NA	False	NA	NA	NA	148152313	148132772	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148135814_148135885_148136038_148137710_148137742_148151916
WTC11_00008837	chr1	-	259	1	FSM	ENSG00000235988.1	ENST00000452108.1	331	1	117	-45	117	45	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGGGCGAAGGCCATT	-148317876	False	NA	NA	False	GGGGCT	-19	NA	148317896	148317637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148317600_148317900
WTC11_00008838	chr1	-	376	1	FSM	ENSG00000272824.1	ENST00000609678.1	442	1	115	-49	115	49	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGGTTGCCCAGAAAAG	-148358529	False	NA	NA	False	NA	NA	NA	148358571	148358195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148358200_148358600
WTC11_00008839	chr1	-	1070	10	NNC	ENSG00000270629.7	novel	10779	71	NA	NA	8457	-881	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	12.2746350930146	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGCAATTGTGGA	NA	False	NA	NA	False	AAGAAA	-38	NA	148585228	148533859	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148533970_148572442_148572536_148575731_148575812_148576409_148576462_148577182_148577356_148577982_148578035_148579073_148579238_148583140_148583193_148584470_148584677_148585140
WTC11_00008841	chr1	-	914	6	ISM	ENSG00000270629.7	ENST00000621070.4	2701	19	3234	53280	1029	7386	internal_fragment	TRUE	canonical	0	0	junction_2	19.5795812008327	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTAAGGTGGCCATAGG	NA	False	NA	NA	False	NA	NA	NA	148592656	148586258	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_148586470_148587300_148587404_148589183_148589394_148590756_148590969_148591431_148591505_148592551
WTC11_00008842	chr1	-	880	7	NIC	ENSG00000269713.8	novel	5632	28	NA	NA	3	-119	combination_of_known_junctions	FALSE	canonical	1	11	junction_6	17.2401340546477	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCGCCCTTTACGTGGA	NA	False	NA	NA	False	NA	NA	NA	149063802	149055748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_149055900_149056511_149056621_149057334_149057508_149058163_149058216_149058924_149059098_149062861_149062914_149063632
WTC11_00008843	chr1	-	618	2	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCTCTTTTCTTGCAA	NA	False	NA	NA	False	ATTAAA	-24	NA	149358393	149357752	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_149358029_149358051
WTC11_00008844	chr1	-	367	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATGATTTTTTTTTTC	-149810764	False	NA	NA	False	ATTAAA	-16	NA	149810774	149810407	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_149810400_149810800
WTC11_00008845	chr1	-	254	1	FSM	ENSG00000183598.4	ENST00000331491.2	469	1	93	122	93	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATGCCAAGCGCGTGA	-149812934	True	NA	NA	False	GGGGCT	-25	NA	149813600	149813346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149813300_149813600
WTC11_00008846	chr1	-	5475	3	ISM	ENSG00000264522.6	ENST00000581312.6	8922	12	61693	1929	22228	-1929	3prime_fragment	FALSE	canonical	3	22	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGATCTTGAACTCC	NA	False	NA	NA	False	NA	NA	NA	149949033	149939740	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_149945066_149947250_149947336_149948968
WTC11_00008847	chr1	-	3461	7	NIC	ENSG00000143401.15	novel	3407	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_2	423.302886044182	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-150190470	True	NA	-2	True	AATAAA	-24	NA	150236112	150218416	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_150220762_150223185_150223295_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
WTC11_00008849	chr1	-	2592	7	Fusion	ENSG00000289041.1_ENSG00000117362.13	novel	1730	7	NA	NA	-50	0	intron_retention	FALSE	canonical	3	7	junction_6	158.57849440857	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150282199	False	NA	-21	True	AATAAA	-14	NA	150282221	150265403	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697_150269330_150282010
WTC11_00008851	chr1	-	1625	8	FSM	ENSG00000143387.14	ENST00000676680.1	1625	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.1601797533521	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-150807720	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150796899_150799167_150799274_150799543_150799706_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
WTC11_00008852	chr1	-	7684	28	Fusion	ENSG00000143387.14_ENSG00000143437.21	novel	4710	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	40	junction_5	113.1601072664	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAATAAATAGCATCTA	-150871640	True	NA	-30	True	AATAAA	-20	NA	150876568	150796238	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
WTC11_00008854	chr1	-	597	2	FSM	ENSG00000143437.21	ENST00000478972.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACCAGCCACAGGTG	-150830371	False	NA	NA	False	NA	NA	NA	150830382	150829109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150829228_150829903
WTC11_00008855	chr1	-	2114	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	13	273	13	13	multi-exon	FALSE	canonical	0	0	junction_9	8.3813431847316	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATCTCAACAATTTGA	-151006280	True	NA	-3	True	AATAAA	-29	NA	151006844	150996821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
WTC11_00008859	chr1	-	1928	12	FSM	ENSG00000143416.21	ENST00000426705.6	1928	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	83.1887230119782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	-151371823	True	NA	-5	True	AATAAA	-19	NA	151372703	151364304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369555_151369712_151369979_151372637
WTC11_00008861	chr1	-	929	9	FSM	ENSG00000143416.21	ENST00000458566.5	929	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	91.6951470907812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTCTCCCTGGACG	-151371803	True	NA	NA	False	NA	NA	NA	151372683	151365671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369507_151369712_151369770_151372637
WTC11_00008865	chr1	-	2512	7	FSM	ENSG00000143442.22	ENST00000485040.5	2741	7	0	229	0	-229	multi-exon	FALSE	canonical	3	55	junction_6	20.1390996157557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGTCCAAGACCAGCC	-151458965	False	214	NA	False	NA	NA	NA	151459179	151426417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
WTC11_00008867	chr1	-	1519	2	NNC	ENSG00000225556.1	novel	1757	2	NA	NA	761	-16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCCTTGTCCTTAGCC	-151839725	True	NA	-45	True	AATAAA	-1	NA	151839796	151837834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151839221_151839663
WTC11_00008868	chr1	-	409	3	FSM	ENSG00000197747.9	ENST00000478348.1	409	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	719	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGGTCCTGCCTCTTGT	-151975818	True	NA	NA	False	NA	NA	NA	151993829	151985157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151985336_151986098_151986252_151993751
WTC11_00008869	chr1	-	614	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	-26	45480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2208.19851160775	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACACTGATGTTGCTTTT	-152014780	True	NA	NA	False	AAAAAG	-2	NA	152037030	151987025	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987051_152032505_152032824_152033647_152033801_152036912
WTC11_00008870	chr1	-	613	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	-26	45480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2208.19851160775	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACACTGATGTTGCTTTT	-152014780	True	NA	NA	False	AAAAAG	-2	NA	152037030	151987025	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987054_152032509_152032824_152033647_152033801_152036912
WTC11_00008871	chr1	-	757	4	NNC	ENSG00000189171.15	novel	710	4	NA	NA	-245	38105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.127363275903	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGTGTGTCCATTAGAT	-153627289	False	NA	NA	False	NA	NA	NA	153627750	153580681	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153580721_153618802_153619039_153626319_153626534_153627482
WTC11_00008873	chr1	-	5505	27	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_23	48.7923537757941	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCGGCCTCCTGTTCCC	-153943398	True	NA	-6	True	AGTAAA	-18	NA	153946663	153929502	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942555_153942626_153942877_153943131_153944057_153944398_153946296
WTC11_00008876	chr1	-	589	8	FSM	ENSG00000143545.10	ENST00000495720.5	868	8	279	0	167	0	multi-exon	FALSE	canonical	1	2	junction_7	243.012555315186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGACAACGGCAGAGG	-153973559	False	NA	-111	True	NA	NA	NA	153986079	153982060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986016
WTC11_00008877	chr1	-	2145	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTTCCTTCCTTC	-154080885	True	NA	NA	False	AAAACA	-6	NA	154183205	154125745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125786_154156366_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00008878	chr1	-	2146	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.13696592768	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTTCCTTCCTTC	-154080885	True	NA	NA	False	AAAACA	-6	NA	154183205	154125745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125788_154156367_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
WTC11_00008879	chr1	-	1522	7	NNC	ENSG00000143612.21	novel	1678	7	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_6	318.869182511505	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154220495	False	NA	-18	True	AATAAA	-22	NA	154220511	154206719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220418
WTC11_00008881	chr1	-	1860	14	NNC	ENSG00000160714.10	novel	3239	13	NA	NA	0	2649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.3596084462235	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGTGC	-154556157	True	NA	NA	False	ACTAAA	-25	NA	154558662	154545927	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154545955_154549982_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
WTC11_00008882	chr1	-	6832	15	FSM	ENSG00000160710.18	ENST00000648714.2	6832	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	265.714026497569	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	-154602671	True	NA	NA	False	NA	NA	NA	154608204	154581694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590341_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
WTC11_00008883	chr1	-	2534	13	NNC	ENSG00000160691.19	novel	3059	13	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	325.084305304879	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCTGCCTCTTAACC	-154960438	True	NA	-18	True	ATTAAA	-13	NA	154970731	154962301	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
WTC11_00008884	chr1	-	822	2	FSM	ENSG00000232093.1	ENST00000452962.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTTCAATGCTATTG	-155046038	False	NA	0	True	ATTAAA	-22	NA	155046118	155045190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155045854_155045959
WTC11_00008885	chr1	-	927	7	FSM	ENSG00000185499.17	ENST00000438413.5	927	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.94694069321861	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	-155192821	False	NA	NA	False	NA	NA	NA	155192893	155185947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188055_155192182_155192284_155192785
WTC11_00008886	chr1	-	859	8	FSM	ENSG00000185499.17	ENST00000337604.6	859	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4.3985155195259	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	-155192796	False	NA	NA	False	NA	NA	NA	155192868	155186122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188286_155192182_155192284_155192785
WTC11_00008887	chr1	-	310	2	FSM	ENSG00000185499.17	ENST00000620770.1	572	2	0	262	0	77	multi-exon	TRUE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGGACAGGATGTCACT	-155192837	False	90	NA	False	NA	NA	NA	155192909	155192124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155192311_155192785
WTC11_00008888	chr1	-	1884	12	FSM	ENSG00000160766.15	ENST00000486869.5	1884	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	18.1130517756699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155218861	False	NA	NA	False	NA	NA	NA	155218943	155213824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155214474_155214567_155214685_155215053_155215163_155215562_155215652_155215761_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217518_155217594_155217963_155218050_155218387_155218480_155218847
WTC11_00008889	chr1	-	948	7	FSM	ENSG00000160767.22	ENST00000472550.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	40.5298244095218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCCATCCAGCGCAGCCG	-155254954	False	NA	NA	False	NA	NA	NA	155254964	155250693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155254399_155254457_155254652
WTC11_00008890	chr1	-	820	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGAGTGGATTCCTCA	NA	False	NA	-3	True	AATAAA	-15	NA	155468586	155467766	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_155467800_155468600
WTC11_00008891	chr1	-	5855	4	NNC	ENSG00000116539.14	novel	11942	28	NA	NA	-31	-7970	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1.88561808316413	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGAGTGGATTCCTCA	-155560713	True	NA	-3	True	AATAAA	-15	NA	155562872	155467766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155468445_155477885_155482450_155521099_155521619_155562778
WTC11_00008892	chr1	-	2678	11	NIC	ENSG00000163374.20	novel	2626	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	106.5393823898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155688175	True	NA	-11	True	AATAAA	-21	NA	155689000	155659453	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
WTC11_00008893	chr1	-	3045	10	NIC	ENSG00000163374.20	novel	2743	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	248	junction_2	50.8614676242132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTCATTGATTTGTG	-155686397	True	NA	-13	True	AATAAA	-19	NA	155688705	155659455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
WTC11_00008894	chr1	-	2375	9	NIC	ENSG00000163374.20	novel	2690	10	NA	NA	-9	554	intron_retention	FALSE	canonical	3	16	junction_7	116.252956951641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCCCCAGACTATTCCC	-155688770	False	NA	NA	False	NA	NA	NA	155688783	155660162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155688070_155688202_155688658
WTC11_00008898	chr1	-	704	3	NIC	ENSG00000116580.20	novel	471	4	NA	NA	4	-5962	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTTTTTGTTGTTTT	-155853238	True	NA	1	True	AATAAA	-25	NA	155857200	155832831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155832951_155853275_155853807_155857146
WTC11_00008899	chr1	-	2777	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	50.8744829728173	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924745	True	NA	-7	True	AATAAA	-14	NA	155934358	155913044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
WTC11_00008900	chr1	-	1870	8	FSM	ENSG00000160781.17	ENST00000292291.10	1969	8	0	99	0	-3	multi-exon	FALSE	canonical	1	1	junction_7	6.36636570147348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTTCTAGAACTGAAG	-156248016	False	NA	-12	True	AATAAA	-18	NA	156248056	156243418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781_156245988_156246122_156246251_156246680_156246757_156247956
WTC11_00008901	chr1	-	834	4	NIC	ENSG00000160781.17	novel	2277	7	NA	NA	1994	-216	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	6.79869268479038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATCCCTGACCCTGTC	-156245980	False	NA	NA	False	NA	NA	NA	156246020	156244127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156244404_156244689_156244912_156245141_156245239_156245781
WTC11_00008902	chr1	-	742	6	FSM	ENSG00000160781.17	ENST00000480773.5	742	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.49941174435031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTACATCGGTGAGGG	-156247974	False	NA	NA	False	NA	NA	NA	156248014	156244773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156244912_156245141_156245278_156245781_156245988_156246122_156246251_156246680_156246757_156247956
WTC11_00008903	chr1	-	501	2	FSM	ENSG00000125462.19	ENST00000498346.1	588	2	91	-4	91	-1	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTAATAGTGGTAGTGG	NA	False	NA	-6	True	AATAAA	-19	NA	156408000	156404259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156407841
WTC11_00008906	chr1	-	2336	7	NNC	ENSG00000143321.19	novel	2309	6	NA	NA	0	27943	intron_retention	FALSE	non_canonical	0	0	junction_1	511.163840879049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGGGGGAGGGGATTT	-156723092	True	NA	NA	False	NA	NA	NA	156751675	156714165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156714195_156742110_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
WTC11_00008907	chr1	-	2336	7	NNC	ENSG00000143321.19	novel	2309	6	NA	NA	0	25580	intron_retention	FALSE	non_canonical	0	0	junction_1	511.163840879049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGACTTGATATTTCTGA	-156723092	True	NA	NA	False	NA	NA	NA	156751675	156716528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156716558_156742110_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
WTC11_00008908	chr1	-	2681	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-5	-23	combination_of_known_junctions	FALSE	canonical	2	20	junction_3	110.200826776491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATTTTTATAATGGA	-156723533	True	NA	12	True	NA	NA	NA	156728446	156721917	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
WTC11_00008909	chr1	-	7243	39	NIC	ENSG00000132694.19	novel	7261	41	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_19	28.2802555360731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGTGTGTGTGTTTCT	-157041131	True	NA	-5	True	AAGAAA	-17	NA	157045850	156934839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156936059_156936815_156937006_156937248_156937497_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156971696_156971817_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
WTC11_00008910	chr1	-	381	4	FSM	ENSG00000132694.19	ENST00000483682.1	466	4	9	76	9	-76	multi-exon	FALSE	canonical	3	57	junction_3	29.7993288515027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATCTGGAGCCACC	-156971783	False	NA	NA	False	NA	NA	NA	156971816	156967986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156968125_156969281_156969359_156969997_156970044_156971696
WTC11_00008911	chr1	-	8482	1	FSM	ENSG00000143315.8	ENST00000368090.5	7038	1	-1966	522	-1966	-522	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCTTTTTAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	160033956	160025474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160025500_160034000
WTC11_00008912	chr1	-	4133	15	NNC	ENSG00000132716.19	novel	4106	14	NA	NA	0	74871	intron_retention	TRUE	non_canonical	0	0	junction_1	207.274637884629	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAAAGGGAGGAGAAGGA	-160250424	True	NA	NA	False	AAAAAG	-3	NA	160262451	160140843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215719_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
WTC11_00008913	chr1	-	3999	15	NNC	ENSG00000132716.19	novel	3972	14	NA	NA	0	74871	intron_retention	FALSE	non_canonical	0	0	junction_1	211.474898399458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAAAGGGAGGAGAAGGA	-160250449	True	NA	NA	False	AAAAAG	-3	NA	160262476	160140843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215719_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
WTC11_00008915	chr1	-	3878	15	NNC	ENSG00000132716.19	novel	3867	14	NA	NA	0	74871	intron_retention	FALSE	non_canonical	0	0	junction_1	209.217407185415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAAAGGGAGGAGAAGGA	-160250501	True	NA	NA	False	AAAAAG	-3	NA	160262528	160140843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215719_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
WTC11_00008916	chr1	-	3793	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	95	junction_12	170.206655438486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250522	True	NA	-34	True	AGTAAA	-17	NA	160262549	160215719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
WTC11_00008918	chr1	-	535	1	FSM	ENSG00000224261.2	ENST00000453374.2	886	1	-18	369	-18	-369	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGGATGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	160267243	160266708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160266700_160267200
WTC11_00008919	chr1	-	5462	31	FSM	ENSG00000122218.16	ENST00000647693.1	5462	31	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	167.894755394232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGAGCTTCTTGACT	-160328941	True	NA	-31	True	AATAAA	-3	NA	160343209	160289290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
WTC11_00008921	chr1	-	4012	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	0	21369	intron_retention	FALSE	non_canonical	0	0	junction_1	529.552273151575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGCACAATCTTCCAGA	-160994078	True	NA	NA	False	NA	NA	NA	161021175	160973841	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160973867_160995885_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
WTC11_00008922	chr1	-	3716	12	NNC	ENSG00000270149.5	novel	2096	13	NA	NA	16120	24115	intron_retention	TRUE	canonical	0	0	junction_1	670.62495831183	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGCACAATCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	161022824	160973841	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160973867_160996193_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009_161021113_161022749
WTC11_00008923	chr1	-	3715	12	NNC	ENSG00000270149.5	novel	2096	13	NA	NA	16120	24115	intron_retention	FALSE	non_canonical	0	0	junction_1	670.62495831183	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGCACAATCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	161022824	160973841	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160973867_160996194_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009_161021113_161022749
WTC11_00008925	chr1	-	2081	8	NNC	ENSG00000158850.15	novel	1933	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	141.026701770427	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	-161174307	True	NA	-19	True	AATAAA	-15	NA	161177403	161171310	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177169
WTC11_00008926	chr1	-	2118	9	NIC	ENSG00000158850.15	novel	2414	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	154.475271079225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174382	True	NA	-20	True	AATAAA	-14	NA	161177478	161171311	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161176911_161177107_161177422
WTC11_00008928	chr1	-	1224	1	NIC	ENSG00000188931.4	novel	774	5	NA	NA	1202	-718	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACCACTATCCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	161366674	161365450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_161365400_161366700
WTC11_00008929	chr1	-	418	1	FSM	ENSG00000213075.7	ENST00000454082.1	372	1	-5	-41	-5	41	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTCAAAAAAAAAAAGACAT	NA	False	NA	NA	False	AATAAA	-14	NA	161685214	161684796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161684800_161685200
WTC11_00008930	chr1	-	913	1	FSM	ENSG00000273365.1	ENST00000608512.1	729	1	-194	10	-194	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTCTCTATTGTGTTT	NA	False	NA	NA	False	ATTAAA	-4	NA	165707478	165706565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165706600_165707500
WTC11_00008931	chr1	-	2128	9	NNC	ENSG00000152382.6	novel	2096	8	NA	NA	0	73960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.041405632413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAAGACCCATCAGTGT	-166871558	True	NA	NA	False	NA	NA	NA	166876264	166782549	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_166782582_166856509_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
WTC11_00008934	chr1	-	280	1	FSM	ENSG00000268062.1	ENST00000599419.1	203	1	110	-187	110	187	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGTGGTAAGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	171345197	171344917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171344900_171345200
WTC11_00008935	chr1	-	209	1	FSM	ENSG00000233328.3	ENST00000442087.2	423	1	231	-17	231	17	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCACCGCTCCCCACA	NA	False	NA	NA	False	NA	NA	NA	171670708	171670499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171670500_171670700
WTC11_00008936	chr1	-	1350	2	FSM	ENSG00000203739.5	ENST00000661267.1	1370	2	0	20	0	-14	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGTAGAATTTCTAA	-173477154	False	NA	NA	False	AATAAA	-3	NA	173477171	173417812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173418623_173476631
WTC11_00008937	chr1	-	837	2	FSM	ENSG00000203739.5	ENST00000654140.1	960	2	0	123	0	-123	multi-exon	FALSE	canonical	2	6	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAAAATGGGCTTGGG	-173442002	False	NA	NA	False	NA	NA	NA	173442020	173440015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173440751_173441918
WTC11_00008938	chr1	-	458	8	ISM	ENSG00000234741.9	ENST00000687435.1	500	9	952	6	2	0	3prime_fragment	FALSE	canonical	3	84	junction_2	1267.35999105967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
WTC11_00008939	chr1	-	869	11	FSM	ENSG00000234741.9	ENST00000686995.1	580	11	-295	6	-291	0	multi-exon	FALSE	canonical	3	178	junction_2	1158.37850463482	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173868275	False	NA	-37	True	AATAAA	-14	NA	173868286	173863900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
WTC11_00008940	chr1	-	695	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	-7	0	0	multi-exon	FALSE	canonical	1	5	junction_11	1102.45874719021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	-173867804	False	NA	-40	True	AATAAA	-11	NA	173867815	173863903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
WTC11_00008941	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-173805435	True	NA	-67	True	ATTAAA	-7	NA	173867991	173863930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173867044_173867959
WTC11_00008944	chr1	-	11466	20	NIC	ENSG00000135870.12	novel	11451	20	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_3	3.93154724147013	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGAGTAGCCAATTTT	-174018761	True	NA	1	True	AATAAA	-30	NA	174022369	173931083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_173938875_173941264_173941381_173943441_173943616_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754_173993136_174022095
WTC11_00008945	chr1	-	10961	19	NIC	ENSG00000135870.12	novel	10988	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	4.47386098339739	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTATTTTGTAAATGA	NA	False	NA	-14	True	ATTAAA	-19	NA	173993064	173931213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_173938872_173941264_173941381_173943441_173943589_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754
WTC11_00008946	chr1	-	539	3	FSM	ENSG00000120333.4	ENST00000498253.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTTTATTGAGCATAG	-175006150	False	8674	NA	False	AATAAA	-28	NA	175014824	175010788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175011097_175011672_175011752_175014672
WTC11_00008947	chr1	-	2579	17	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	19	7	combination_of_known_splicesites	TRUE	canonical	3	19	junction_15	108.026038527755	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGTTTTTGTCAAAT	-176205997	True	NA	3	True	AATAAA	-45	NA	176207267	175944823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176149005_176149075_176162868_176162989_176163814_176163892_176184632_176184693_176206571
WTC11_00008948	chr1	-	770	6	FSM	ENSG00000242193.11	ENST00000512906.2	770	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.5299310869258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATCTTGGAGTCAC	-178037541	True	NA	NA	False	NA	NA	NA	178037947	178007965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178008150_178022439_178022669_178026154_178026256_178034704_178034802_178037693_178037802_178037896
WTC11_00008949	chr1	-	440	2	FSM	ENSG00000143322.21	ENST00000662960.1	1558	2	742	376	742	-376	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACCTGCCATTCTTCTT	-179118731	True	NA	NA	False	NA	NA	NA	179118742	179117232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179117517_179118586
WTC11_00008950	chr1	-	8171	6	NIC	ENSG00000169905.13	novel	8319	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	9.41488183675186	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-179871478	True	NA	-13	True	AATAAA	-14	NA	179877790	179839975	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877692
WTC11_00008951	chr1	-	1316	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	-343	16	-343	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGTAATTTTAAGTTG	-179882746	False	NA	NA	False	ATTAAA	-4	NA	179882938	179881622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179881600_179882900
WTC11_00008952	chr1	-	371	1	FSM	ENSG00000260360.1	ENST00000567904.1	1257	1	139	747	139	-747	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGTAACTAGGACATTG	-179954291	False	NA	NA	False	NA	NA	NA	179954301	179953930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179953900_179954300
WTC11_00008954	chr1	-	858	2	NNC	ENSG00000287808.1	novel	1000	2	NA	NA	478	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGCAAGTGTTTTATA	-182839061	False	NA	NA	False	AATAAA	-24	NA	182839083	182837184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_182837935_182838975
WTC11_00008955	chr1	-	699	1	FSM	ENSG00000232860.9	ENST00000690711.1	2092	1	1271	122	104	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGTGAAAGGAGTCTA	-183471609	False	NA	NA	False	GATAAA	-34	NA	183471625	183470926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183470900_183471600
WTC11_00008957	chr1	-	478	1	FSM	ENSG00000271387.1	ENST00000605589.1	952	1	195	279	195	-279	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAACACCCAAGAAAACA	-184386136	False	NA	NA	False	NA	NA	NA	184386509	184386031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184386000_184386500
WTC11_00008958	chr1	-	491	5	ISM	ENSG00000116406.20	ENST00000685249.1	4267	22	44376	3647	1288	-3096	internal_fragment	FALSE	canonical	1	1	junction_4	31.3717627812018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGGAAAATGAAGAACA	NA	False	NA	NA	False	NA	NA	NA	184710469	184694467	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_184694473_184702810_184702997_184706642_184706809_184708152_184708211_184710393
WTC11_00008961	chr1	-	1524	12	NIC	ENSG00000116750.14	novel	1534	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	164.452861944245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050726	True	NA	NA	False	AATAAA	-20	NA	193059348	193018404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
WTC11_00008962	chr1	-	7122	26	NNC	ENSG00000162687.19	novel	6094	30	NA	NA	-305	3200	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	6.75798786622172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTTATTATACCCAAG	-196608854	False	NA	6	True	AATAAA	-27	NA	196608865	196254888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_196258495_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196317147_196317270_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
WTC11_00008963	chr1	-	3218	16	ISM	ENSG00000066279.19	ENST00000367408.6	3924	18	4600	1	4600	-1	3prime_fragment	FALSE	canonical	3	24	junction_10	62.5767439939862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTGTCTATTATCTT	-197125364	False	NA	NA	False	AATAAA	-25	NA	197125374	197084121	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869
WTC11_00008965	chr1	-	713	1	FSM	ENSG00000235748.1	ENST00000442280.1	560	1	27	-180	27	180	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACTTTGGGAGGCTGA	-197139270	False	NA	NA	False	ACTAAA	-43	NA	197139280	197138567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197138600_197139300
WTC11_00008967	chr1	-	2255	9	NNC	ENSG00000118197.14	novel	2229	8	NA	NA	0	-1635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.9615099714943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGTAAACGGGTAAAG	-200668343	True	NA	NA	False	NA	NA	NA	200669907	200625530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_200625561_200644040_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
WTC11_00008968	chr1	-	961	4	FSM	ENSG00000118197.14	ENST00000413408.5	945	4	0	-16	0	5	multi-exon	FALSE	canonical	2	2	junction_1	34.9888871246603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGCTTTACTTTCCTC	NA	False	NA	-5	True	AATAAA	-22	NA	200650652	200640805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200641257_200648438_200648568_200649073_200649227_200650424
WTC11_00008969	chr1	-	208	1	ISM	ENSG00000232237.5	ENST00000449188.3	2036	2	12978	56	12978	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCGTCGGCACCAAAGA	NA	False	NA	NA	False	NA	NA	NA	201114206	201113998	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_201114000_201114200
WTC11_00008971	chr1	-	366	3	Genic_Genomic	ENSG00000236439.4	novel	254	1	NA	NA	0	94035	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGACCTTTCTTTCT	NA	False	NA	NA	False	AAAACA	-3	NA	202472117	202377828	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_202377852_202420967_202420989_202471795
WTC11_00008977	chr1	-	1116	7	FSM	ENSG00000159346.13	ENST00000367254.7	1116	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	418.722428611392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTGTTTCTAGAAGA	-202947357	True	NA	9	True	TTTAAA	-36	NA	202958264	202941489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202941702_202942024_202942219_202943757_202943864_202946438_202946611_202948303_202948421_202950929_202951165_202958184
WTC11_00008980	chr1	-	6321	1	FSM	ENSG00000174529.7	ENST00000367167.4	1332	1	-4981	-8	-4981	8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTTTTTCTGCTCTTC	-205089428	False	NA	-10	True	AATAAA	-23	NA	205089441	205083120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205083100_205089400
WTC11_00008982	chr1	-	6626	4	NNC	ENSG00000281406.2	novel	6454	3	NA	NA	-80	21296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.2192186706253	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGCATGGTGACACGC	-205457157	False	NA	NA	False	NA	NA	NA	205457171	205413588	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205413613_205434885_205441063_205455916_205456036_205456865
WTC11_00008985	chr1	-	3188	6	NNC	ENSG00000117280.13	novel	1723	6	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	26.2022899762597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGCCTTTAATGTGA	-205774573	True	NA	-3	True	AATAAA	-28	NA	205775449	205767976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775092_205775373
WTC11_00008987	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234012	False	NA	2	True	AATAAA	-35	NA	210234044	210231455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_210231772_210233634
WTC11_00008989	chr1	-	2363	1	FSM	ENSG00000261314.1	ENST00000567907.1	711	1	686	-2338	686	2338	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCTCCATTCTTTATA	NA	False	NA	NA	False	NA	NA	NA	211583039	211580676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211580700_211583000
WTC11_00008991	chr1	-	486	2	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTAGACTTTGTTTCC	-212907356	False	NA	-6	True	AATAAA	-28	NA	212907396	212899500	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212899707_212907116
WTC11_00008992	chr1	-	1626	7	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	103	-32	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	101.450726956489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATGCATCTTCCTT	-213012872	False	NA	-23	True	AGTAAA	-17	NA	213013315	212994760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213005032_213005455_213007128_213007199_213008209_213008467_213013092
WTC11_00008993	chr1	-	390	1	FSM	ENSG00000225920.2	ENST00000424737.2	654	1	4	260	4	-260	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACCAATTCCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	219200563	219200173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_219200200_219200600
WTC11_00008994	chr1	-	259	1	ISM	ENSG00000215817.8	ENST00000651890.1	4769	2	3557	1320	3557	-1320	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTAGTGACTCCTTG	NA	False	NA	NA	False	AAAAAG	-34	NA	219609588	219609329	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_219609300_219609600
WTC11_00008995	chr1	-	2312	8	FSM	ENSG00000162813.18	ENST00000544404.5	2379	8	0	67	0	-65	multi-exon	FALSE	canonical	1	2	junction_7	22.3277990909292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAGATTTTTATTTTTA	-220088310	True	NA	NA	False	ATTAAA	-16	NA	220089853	220057548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220089643
WTC11_00008998	chr1	-	561	1	FSM	ENSG00000229399.1	ENST00000413568.1	445	1	85	-201	85	201	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGAGAAGAATGGCTGGA	-222641706	False	NA	NA	False	NA	NA	NA	222641773	222641212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222641200_222641800
WTC11_00008999	chr1	-	4314	19	NNC	ENSG00000143514.17	novel	4741	19	NA	NA	0	57617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.6024069021337	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAGAAAGGAA	-223845768	False	NA	NA	False	AAAAAG	-6	NA	223845794	223722275	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223722306_223780087_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223821219_223821368_223845653
WTC11_00009001	chr1	-	2341	2	ISM	ENSG00000272645.4	ENST00000634905.2	2975	13	38904	-213	-260	128	3prime_fragment	FALSE	canonical	3	45	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGTGTTCTGTTCTGGG	NA	False	NA	NA	False	AATGAA	-16	NA	223953699	223951265	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_223952292_223952384
WTC11_00009003	chr1	-	3089	14	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	18.1440651616917	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	-223991504	True	NA	-5	True	NA	NA	NA	223992594	223951393	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223952384_223952868_223954476_223954597_223961167_223961233_223962076_223962274_223962610_223962709_223964455_223964540_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
WTC11_00009004	chr1	-	2991	20	ISM	ENSG00000143748.18	ENST00000482491.5	3003	24	17989	9	-76	-1	3prime_fragment	FALSE	canonical	3	28	junction_15	64.0113822980875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGACTATACAGAAAAG	NA	False	NA	-11	True	AATAAA	-42	NA	224312200	224227345	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799
WTC11_00009005	chr1	-	2885	23	NNC	ENSG00000143748.18	novel	2897	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	61.3414269572939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTTGACTATACAGAAA	-224325961	True	NA	-13	True	AATAAA	-40	NA	224330147	224227347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268150_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
WTC11_00009009	chr1	-	651	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	0	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.675435561221	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGAAGTAAGGCATTCT	-224615988	True	NA	-6	True	AATAAA	-20	NA	224616220	224611399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_224611593_224615217_224615428_224615611_224615737_224616097
WTC11_00009012	chr1	-	1671	5	NNC	ENSG00000243709.1	novel	1626	4	NA	NA	0	13616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.468831613293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAACACCTCAGATTT	-225887414	True	NA	NA	False	AAAAAG	-24	NA	225889146	225872665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225872712_225886282_225887091_225887398_225887639_225887785_225888033_225888816
WTC11_00009013	chr1	-	1915	3	NIC	ENSG00000243709.1	novel	1626	4	NA	NA	19	0	intron_retention	FALSE	canonical	3	371	junction_2	45	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-225889105	False	NA	-9	True	AATAAA	-38	NA	225889127	225886281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_225887639_225887785_225888033_225888816
WTC11_00009014	chr1	-	1705	7	NNC	ENSG00000143811.20	novel	1680	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	529.520432928597	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908542	True	NA	-3	True	AATAAA	-18	NA	225924278	225919877	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922077_225922203_225922384_225923700_225923772_225924043
WTC11_00009015	chr1	-	1392	5	NIC	ENSG00000143768.13	novel	2019	4	NA	NA	15	188	intron_retention	FALSE	canonical	3	15	junction_1	113.113880668997	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTCTTTAGTTTATG	-225939446	True	NA	1	True	ATTAAA	-15	NA	225941205	225936409	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_225936578_225937382_225937805_225939360_225939601_225939755_225940003_225940890
WTC11_00009016	chr1	-	724	5	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	25	-27	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	55.3398590529466	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATCTTTTGTATTTAT	-225994909	True	NA	-33	True	AAGAAA	-14	NA	225999318	225982728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225982927_225992397_225992568_225992890_225993003_225995265_225995384_225999192
WTC11_00009017	chr1	-	1522	6	NNC	ENSG00000081692.13	novel	2484	6	NA	NA	11	896	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.918653007093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTGCCTGTTTTCAGG	-227733424	True	NA	32	True	NA	NA	NA	227735291	227732251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_227732677_227732880_227733028_227733303_227733682_227733906_227734033_227734650_227734817_227735011
WTC11_00009018	chr1	-	990	4	FSM	ENSG00000162910.19	ENST00000366734.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	326.7438684284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108887	False	NA	1	True	NA	NA	NA	228108897	228106678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436
WTC11_00009021	chr1	-	2711	7	NNC	ENSG00000154370.16	novel	2710	6	NA	NA	0	9203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.159457361284	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTAGTTTGGTTTTC	-228404978	True	NA	NA	False	NA	NA	NA	228406800	228384469	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_228384502_228393671_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
WTC11_00009022	chr1	-	263	1	FSM	ENSG00000181201.4	ENST00000436555.2	382	1	180	-61	180	61	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGTGCCACCTGGTCTGG	-228462533	False	NA	NA	False	NA	NA	NA	228464414	228464151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228464200_228464400
WTC11_00009023	chr1	-	4195	27	NNC	ENSG00000069248.12	novel	5208	26	NA	NA	0	18523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.1735131915133	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCTGTCTCAAGAAAAAA	-229502774	True	NA	NA	False	NA	NA	NA	229508341	229421735	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_229421764_229441299_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
WTC11_00009024	chr1	-	282	2	FSM	ENSG00000069248.12	ENST00000485119.1	965	2	465	218	146	-218	multi-exon	FALSE	canonical	3	398	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCTGTTGGTGGGCA	-229450582	False	NA	NA	False	NA	NA	NA	229450605	229448989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229449191_229450524
WTC11_00009025	chr1	-	3462	25	NNC	ENSG00000143643.13	novel	3276	23	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	12.0896535195274	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-230978146	True	NA	-1	True	AATAAA	-41	NA	230978827	230906242	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928055_230928172_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230936157_230936265_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
WTC11_00009026	chr1	-	1246	7	ISM	ENSG00000135749.19	ENST00000462233.5	3392	20	21017	111252	0	18	internal_fragment	FALSE	canonical	0	0	junction_1	44.838289688861	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAATACATTTTTATCA	-233179130	False	NA	13	True	AATAAA	-36	NA	233179174	233095387	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065
WTC11_00009028	chr1	-	1131	2	Fusion	ENSG00000231940.1_ENSG00000251508.1	novel	324	2	NA	NA	2	63	intron_retention	FALSE	canonical	1	1	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCATCTTTCCTGGGTCCT	-233290029	True	NA	NA	False	AATAAA	-40	NA	233295725	233288804	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_233289536_233295325
WTC11_00009029	chr1	-	1370	2	FSM	ENSG00000233332.1	ENST00000412483.1	1723	2	78	275	78	-275	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTGATGACACTACAA	-234214971	True	NA	NA	False	NA	NA	NA	234215010	234212880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234214108_234214867
WTC11_00009030	chr1	-	8592	30	NNC	ENSG00000059588.10	novel	5206	30	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	42.2988349575184	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTTAATAAACACTTTT	-234478624	True	NA	-31	True	NA	NA	NA	234479193	234391409	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902_234409574_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234446802_234446976_234448479_234448580_234450427_234450567_234457666_234457754_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
WTC11_00009034	chr1	-	1913	9	NNC	ENSG00000162885.14	novel	1874	8	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.827596333214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAATCCTAGTGGGTGTA	-235501521	True	NA	NA	False	AATAAA	-20	NA	235504422	235464901	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235503856_235503902_235504140
WTC11_00009035	chr1	-	5635	19	NIC	ENSG00000116962.15	novel	5792	20	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	32.3920810319474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATCTTCCTCTATCT	-236061576	True	NA	-16	True	AATAAA	-13	NA	236065090	235975836	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235977989_235978994_235979108_235979821_235979946_235980495_235980654_235981610_235981783_235985378_235985506_235990885_235991059_235993644_235993873_236011920_236012044_236017147_236017274_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
WTC11_00009039	chr1	-	6511	19	NIC	ENSG00000143702.16	novel	6805	19	NA	NA	138	0	intron_retention	FALSE	canonical	0	0	junction_15	54.9108424383013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	-243254347	True	NA	-9	True	AATAAA	-18	NA	243255078	243124427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142366_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00009040	chr1	-	6850	20	NIC	ENSG00000143702.16	novel	7059	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	55.2851084225798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	NA	False	NA	-9	True	AATAAA	-18	NA	243255231	243124427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142366_243142464_243156220_243156348_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00009041	chr1	-	7059	20	FSM	ENSG00000143702.16	ENST00000366542.6	7059	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	49.9060613397687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	NA	False	NA	-9	True	AATAAA	-18	NA	243255281	243124427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142315_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
WTC11_00009048	chr1	-	8894	35	NIC	ENSG00000153207.16	novel	8751	36	NA	NA	-118	69	combination_of_known_splicesites	TRUE	canonical	2	17	junction_34	57.2160659316248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAAGCATTGGTTAA	-246931530	False	NA	55	True	NA	NA	NA	246931542	246839028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923_246864117_246867243_246867352_246867660_246867812_246876036_246876188_246876949_246877082_246877157_246877303_246885492_246885681_246887210_246887358_246888176_246888234_246888393_246888518_246889965_246890060_246891778_246891920_246894658_246894749_246895834_246895926_246898207_246898337_246899450_246899513_246900064_246900247_246900336_246900470_246902524_246902676_246903948_246904034_246905540_246905658_246907550_246907759_246913231_246913413_246916141_246916396_246918249_246918378_246931128
WTC11_00009056	chr1	-	706	4	NNC	ENSG00000196418.13	novel	2243	4	NA	NA	0	-671	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	56.3461523876199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGGTTGTCATTTTTT	-247171881	True	NA	NA	False	AATAAA	-25	NA	247172020	247157587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_247157933_247159005_247159067_247159686_247159814_247171847
WTC11_00009065	chr1	+	636	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTGACTATTCCTGG	5046990	False	NA	NA	False	ACTAAA	-7	NA	5047001	5047637	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5047000_5047600
WTC11_00009066	chr1	+	272	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAACTGAAGAATCACAA	5052437	False	NA	NA	False	NA	NA	NA	5052448	5052720	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5052400_5052700
WTC11_00009067	chr1	+	203	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCCCAATCCCGCTTG	5118040	False	NA	NA	False	NA	NA	NA	5118097	5118300	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5118100_5118300
WTC11_00009068	chr1	+	2536	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACAGCTATTTTTCACT	NA	False	NA	NA	False	AAAAAG	-19	NA	20754060	20756596	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_20754100_20756600
WTC11_00009069	chr1	+	3253	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGGCTTCACTTTGGG	NA	False	NA	NA	False	ATTAAA	-15	NA	23328169	23331422	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_23328200_23331400
WTC11_00009070	chr1	+	1221	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACCCCAGGTTCCC	NA	False	NA	NA	False	NA	NA	NA	26708269	26709490	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_26708300_26709500
WTC11_00009071	chr1	+	341	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCTTGTACCCCCCA	55025060	False	NA	NA	False	NA	NA	NA	55025118	55025459	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55025100_55025500
WTC11_00009072	chr1	+	460	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGGTATCCCAAAACTGC	55026930	False	NA	NA	False	NA	NA	NA	55026988	55027448	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55027000_55027400
WTC11_00009073	chr1	+	347	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTCATCCTGGCTCA	55027682	False	NA	NA	False	NA	NA	NA	55027740	55028087	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55027700_55028100
WTC11_00009074	chr1	+	462	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTGGGGTACGGAAATA	NA	False	NA	NA	False	NA	NA	NA	65646056	65646518	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65646100_65646500
WTC11_00009075	chr1	+	304	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGAGTCATGGCACCAAA	72992795	False	NA	NA	False	NA	NA	NA	72992829	72993133	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72992800_72993100
WTC11_00009076	chr1	+	257	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGACCCTGTAGGAA	NA	False	NA	NA	False	AAGAAA	-14	NA	79639880	79640137	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_79639900_79640100
WTC11_00009077	chr1	+	231	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGGCGGGAGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	79700235	79700466	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_79700200_79700500
WTC11_00009079	chr1	+	683	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAGTAGAGAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	92073721	92074404	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_92073700_92074400
WTC11_00009080	chr1	+	212	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAAATTTGCAATTCC	108473521	False	NA	NA	False	NA	NA	NA	108474877	108475089	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_108474900_108475100
WTC11_00009081	chr1	+	344	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCTTGTAGTCCCAG	NA	False	NA	NA	False	AATAAA	-43	NA	120630719	120631063	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_120630700_120631100
WTC11_00009083	chr1	+	609	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGTTAACTCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	146300562	146301171	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146300600_146301200
WTC11_00009084	chr1	+	1839	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTAGTTCTATAAGCC	NA	False	NA	NA	False	AAAACA	-19	NA	150614348	150616187	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150614300_150616200
WTC11_00009085	chr1	+	379	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGCGGTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	150617984	150618363	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150618000_150618400
WTC11_00009086	chr1	+	583	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAATTCAGGCCTGTT	183617595	False	NA	NA	False	AAAAAG	-30	NA	183617657	183618240	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183617700_183618200
WTC11_00009087	chr1	+	837	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGATCATGCACCCCTTA	212911570	False	NA	NA	False	NA	NA	NA	212911590	212912427	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212911600_212912400
WTC11_00009088	chr1	+	1162	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGAAGCTTGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	218595826	218596988	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_218595800_218597000
WTC11_00009089	chr1	+	478	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCAAAGGAAACAGGCC	221975584	False	NA	NA	False	NA	NA	NA	221975725	221976203	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221975700_221976200
WTC11_00009090	chr1	+	3044	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACCTCATGATCTTAG	NA	False	NA	NA	False	NA	NA	NA	222554636	222557680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_222554600_222557700
WTC11_00009091	chr1	+	558	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCCCCATTTTACTTG	229176898	False	NA	NA	False	TATAAA	-10	NA	229176944	229177502	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_229176900_229177500
WTC11_00009101	chr10	+	4100	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	26.3113229292203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	134408	True	NA	23	True	AATAAA	-19	NA	135454	254637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
WTC11_00009105	chr10	+	1859	13	FSM	ENSG00000015171.20	ENST00000558098.4	1859	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	22.6020832373183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGATCCCATATTACTG	NA	False	NA	3	True	ATTAAA	-19	NA	180012	249261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902
WTC11_00009115	chr10	+	8899	6	FSM	ENSG00000067057.18	ENST00000381072.5	1698	6	-7201	0	-7201	0	multi-exon	FALSE	canonical	3	730	junction_4	59.1154802061186	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAACAGTCCTCTGT	3121768	False	NA	22	True	ATTAAA	-11	NA	3121805	3136793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
WTC11_00009116	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_7	6.96419413859206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5093970	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
WTC11_00009119	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	88.0670339521878	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	5443018	True	NA	16	True	ATTAAA	-23	NA	5446610	5458463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
WTC11_00009134	chr10	+	3387	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_1	59.5684852261073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5888302	True	NA	8	True	ATTAAA	-21	NA	5890247	5937593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5890347_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
WTC11_00009135	chr10	+	3512	20	NNC	ENSG00000134452.20	novel	3548	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	82.6123343329162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5888302	True	NA	8	True	ATTAAA	-21	NA	5890247	5937593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915648_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5936455_5936588_5937109
WTC11_00009137	chr10	+	3702	22	FSM	ENSG00000134452.20	ENST00000379999.6	3702	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	81.5488668656704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5892440	False	NA	8	True	ATTAAA	-21	NA	5894385	5937593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5894512_5895055_5895188_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
WTC11_00009147	chr10	+	927	5	FSM	ENSG00000134453.16	ENST00000476706.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	401.991604389942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	6112639	False	NA	31	True	TATAAA	-33	NA	6112701	6115766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
WTC11_00009149	chr10	+	3704	2	FSM	ENSG00000134453.16	ENST00000467080.1	837	2	-1821	-1046	-616	-567	multi-exon	FALSE	canonical	3	950	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGTTCTGTAAAGT	6112075	False	NA	62	True	AATAAA	-20	NA	6112085	6116880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6114148_6115238
WTC11_00009153	chr10	+	2050	2	FSM	ENSG00000237943.8	ENST00000663449.1	2050	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGTGTCAATTACTAT	6579403	True	NA	NA	False	AATGAA	-44	NA	6580505	6585303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6580928_6583675
WTC11_00009154	chr10	+	1269	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	-6	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6579453	True	NA	NA	False	AAAAAG	-28	NA	6580555	6584508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6580928_6582137_6582202_6583675
WTC11_00009163	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	951.998495693386	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765657	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
WTC11_00009164	chr10	+	1163	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	-99	14	-69	0	multi-exon	TRUE	canonical	0	0	junction_5	1313.22212872575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7788066	False	NA	NA	False	AATAAA	-16	NA	7788077	7807801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
WTC11_00009169	chr10	+	5758	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	14.6076902823347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTCTCTGCGTG	11017824	False	NA	15	True	ATTAAA	-15	NA	11017838	11334358	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
WTC11_00009170	chr10	+	3102	4	ISM	ENSG00000134463.15	ENST00000379215.9	1633	5	-24	6170	-8	2170	5prime_fragment	FALSE	canonical	3	236	junction_1	8.99382504215469	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTTGTCTTTGCTG	11739490	True	NA	2	True	AATAAA	-15	NA	11742357	11757900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407
WTC11_00009174	chr10	+	1715	3	NIC	ENSG00000148426.13	novel	3375	4	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	37.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAATGTCTTAATATA	11822348	True	NA	-11	True	AATAAA	-18	NA	11823392	11870873	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_11823471_11866530_11866784_11869489
WTC11_00009195	chr10	+	4560	20	FSM	ENSG00000065328.17	ENST00000378714.8	4549	20	-11	0	-11	0	multi-exon	TRUE	canonical	3	199	junction_1	29.1190126464983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGTTTTGCTCAATC	13154085	True	NA	11	True	AATAAA	-19	NA	13161546	13211110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
WTC11_00009197	chr10	+	4587	18	FSM	ENSG00000065328.17	ENST00000378694.1	4587	18	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	23.7612111583005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTTCTTAGTTTTGC	13156666	False	NA	5	True	AATAAA	-13	NA	13164127	13211104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090
WTC11_00009211	chr10	+	1695	5	NIC	ENSG00000152455.16	novel	3087	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	90.6128440123143	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872895	True	NA	9	True	ATTAAA	-9	NA	14878894	14903085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_14878961_14896845_14897518_14899538_14899686_14901132_14901263_14902405
WTC11_00009212	chr10	+	1861	5	NNC	ENSG00000152455.16	novel	2959	5	NA	NA	347	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	89.7590524682608	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14879246	False	NA	9	True	ATTAAA	-9	NA	14879268	14903085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_14879501_14896845_14897518_14899538_14899686_14901132_14901263_14902405
WTC11_00009214	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	15097132	False	NA	3	True	AATAAA	-15	NA	15097179	15104251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_15097410_15102217_15102337_15103304
WTC11_00009215	chr10	+	1537	2	FSM	ENSG00000152464.15	ENST00000616640.1	1537	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATAGGGTCCTGTTT	15097132	False	NA	6	True	AATAAA	-18	NA	15097179	15104254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_15097767_15103304
WTC11_00009216	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	15096673	False	NA	7	True	AATAAA	-19	NA	15097330	15104255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_15097410_15103304
WTC11_00009217	chr10	+	1728	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	-251	7	-76	-1	multi-exon	FALSE	canonical	3	51	junction_1	41	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGATTCATAGGGTCCT	15096532	True	NA	2	True	AATAAA	-14	NA	15097103	15104250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_15097767_15102217_15102337_15103304
WTC11_00009220	chr10	+	3706	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	-42	-39	-16	39	multi-exon	FALSE	canonical	3	26	junction_1	12.1346610995116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTAAATACCGTACAT	16436246	True	NA	49	True	NA	NA	NA	16436967	16513784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
WTC11_00009222	chr10	+	564	2	FSM	ENSG00000165983.15	ENST00000485788.1	567	2	0	3	0	-3	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATTTTTGTGTCCCTCC	NA	False	NA	NA	False	AATAAA	-10	NA	16484690	16486789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_16484817_16486351
WTC11_00009223	chr10	+	1868	9	FSM	ENSG00000026025.16	ENST00000224237.9	1868	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	29.7108460835433	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17223273	True	NA	16	True	AATAAA	-16	NA	17229277	17237593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_17229986_17230649_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
WTC11_00009237	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	25	junction_1	24.3629956194955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTACTGTGTTGT	21533680	True	NA	7	True	AATAAA	-19	NA	21534230	21557181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
WTC11_00009238	chr10	+	5144	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	-1	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_1	30.2987875817766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21533680	True	NA	11	True	AATAAA	-19	NA	21534230	21743630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
WTC11_00009240	chr10	+	1873	11	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	19	554	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.7393008994746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATTTCTCAGTTTTTA	21534167	False	NA	NA	False	AATAAA	-16	NA	21534363	21674040	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349
WTC11_00009278	chr10	+	4899	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	-24	0	0	0	multi-exon	FALSE	canonical	3	498	junction_5	44.2169525056724	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	27500048	True	NA	12	True	AATAAA	-22	NA	27504279	27542239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
WTC11_00009284	chr10	+	5928	14	FSM	ENSG00000095787.24	ENST00000354911.9	5912	14	-16	0	-16	0	multi-exon	FALSE	canonical	3	287	junction_7	58.3459383394428	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	28533032	False	NA	NA	False	AATACA	-21	NA	28533101	28623112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
WTC11_00009285	chr10	+	3767	14	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_11	83.8585029720306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATTACCTTGACTTT	28527577	True	NA	56	True	AATAAA	-19	NA	28533136	28620989	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
WTC11_00009286	chr10	+	2839	13	FSM	ENSG00000095787.24	ENST00000347934.8	2839	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	98.0326972097689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTTTCTTTTCCTT	28533260	False	NA	NA	False	AATAAA	-21	NA	28533312	28620543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
WTC11_00009287	chr10	+	3515	14	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	126.447079465385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATTACCTTGACTTT	28533366	False	NA	56	True	AATAAA	-19	NA	28533379	28620989	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610707_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
WTC11_00009297	chr10	+	2782	8	FSM	ENSG00000107968.10	ENST00000542547.5	2782	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	4.99795876701026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTGAAGCCTGTGAT	30433512	True	NA	5	True	AATAAA	-18	NA	30434020	30461833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_30434379_30438915_30439275_30447781_30447950_30450257_30450520_30451637_30451745_30458083_30458237_30459254_30459502_30460705
WTC11_00009306	chr10	+	1055	3	FSM	ENSG00000095794.20	ENST00000489388.5	1022	3	-33	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGCAATTGGATAGATA	35126821	False	NA	-70	True	TTTAAA	-1	NA	35126872	35179769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127194_35178888_35178987_35179133
WTC11_00009310	chr10	+	1794	5	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	44.1871021905714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACTGTGTAATATAAAAG	35125352	True	NA	-19	True	TTTAAA	-29	NA	35126978	35212434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211253
WTC11_00009312	chr10	+	2397	6	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	37.8713612113428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGGGAACAAGCCC	35125362	True	NA	-28	True	AATAAA	-1	NA	35126988	35212923	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211253
WTC11_00009320	chr10	+	1034	3	FSM	ENSG00000095794.20	ENST00000488328.5	1049	3	15	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	35195137	True	NA	12	True	TATAAA	-14	NA	35195147	35212465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35195215_35206894_35207052_35211655
WTC11_00009330	chr10	+	8755	3	ISM	ENSG00000189180.16	ENST00000432900.7	6116	5	3361	34	3337	0	3prime_fragment	FALSE	canonical	3	93	junction_2	33.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGAGGAACATCTTGT	38013916	False	NA	11	True	AATAAA	-14	NA	38014035	38060053	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_38017016_38017290_38017387_38054374
WTC11_00009336	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	78.1601978562338	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	42769728	True	NA	10	True	AATAAA	-22	NA	42782794	42834937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
WTC11_00009345	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.517587627015	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	44958539	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
WTC11_00009352	chr10	+	4639	30	FSM	ENSG00000172661.20	ENST00000374362.6	4623	30	-16	0	3	0	multi-exon	FALSE	canonical	3	45	junction_26	61.6836314786185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	45724330	True	NA	1	True	AATAAA	-20	NA	45727202	45792961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45787034_45787248_45788870_45789492_45790355_45790534_45792260
WTC11_00009353	chr10	+	4642	31	FSM	ENSG00000172661.20	ENST00000623400.4	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	53.99474254242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	45724393	True	NA	4	True	AATAAA	-23	NA	45727265	45792964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
WTC11_00009360	chr10	+	5827	12	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	21.3041725630225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTTTTTTCATTGAA	48302233	True	NA	22	True	AATAAA	-31	NA	48306663	48439360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
WTC11_00009368	chr10	+	3346	8	FSM	ENSG00000204149.15	ENST00000412531.7	2684	8	-664	2	-576	0	multi-exon	FALSE	canonical	3	44	junction_1	19.6229769527917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGTACACATGGCAC	NA	False	NA	12	True	AATAAA	-18	NA	49987741	50010497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_49988939_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
WTC11_00009372	chr10	+	4537	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	55.0886433004994	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTCATTTGTTTACT	50065582	True	NA	4	True	AATAAA	-17	NA	50067965	50133503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
WTC11_00009373	chr10	+	4449	29	NIC	ENSG00000099290.17	novel	4623	30	NA	NA	37	1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	64.3147057643197	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTCATTTGTTTACT	50065607	True	NA	4	True	AATAAA	-17	NA	50067990	50133503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127582_50127796_50129418_50130040_50130900_50131079_50132805
WTC11_00009390	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	58.4534477644865	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	58372925	True	NA	21	True	AATAAA	-23	NA	58385409	58399220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
WTC11_00009394	chr10	+	1883	8	NIC	ENSG00000170312.17	novel	1889	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	479.76775844237	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	60763052	True	NA	NA	False	ATTAAA	-16	NA	60778487	60794852	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791889_60792054_60792147_60792290_60793876
WTC11_00009411	chr10	+	1453	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	586	junction_1	379.283762952629	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68304824	True	NA	28	True	AATAAA	-15	NA	68332063	68342271	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
WTC11_00009412	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_1	341.210083361636	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68304824	True	NA	30	True	AATAAA	-21	NA	68332063	68343193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
WTC11_00009414	chr10	+	1351	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	-19	0	0	0	multi-exon	FALSE	canonical	3	580	junction_4	394.725815137296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	68304863	True	NA	29	True	AATAAA	-16	NA	68332102	68342272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
WTC11_00009415	chr10	+	2704	7	FSM	ENSG00000096746.18	ENST00000481819.5	2704	7	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_1	302.91550893864	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68336710	False	NA	28	True	AATAAA	-15	NA	68336805	68342271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
WTC11_00009417	chr10	+	1521	5	FSM	ENSG00000096746.18	ENST00000490442.5	1521	5	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_1	367.251531650993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGATGTTGATACTT	68337968	False	NA	26	True	AATAAA	-13	NA	68338339	68342269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68338688_68339139_68339227_68339439_68339556_68341173_68341852_68341977
WTC11_00009425	chr10	+	3247	22	FSM	ENSG00000060339.14	ENST00000539539.5	3224	22	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	140.865851818731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACAGGTAAGGGT	68713569	True	NA	13	True	AAAAAG	-37	NA	68721215	68788316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142
WTC11_00009446	chr10	+	4154	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	-22	95	0	-95	multi-exon	FALSE	canonical	3	611	junction_8	60.8911682840788	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTGGGTGACAGAGA	69114334	True	NA	NA	False	NA	NA	NA	69124155	69174317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
WTC11_00009458	chr10	+	1286	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	-18	-522	-14	38	multi-exon	FALSE	canonical	3	138	junction_1	45.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGCAGATCCGGAAAAC	69628079	True	NA	NA	False	AGTAAA	-41	NA	69630232	69633634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69630314_69631479_69631840_69632789
WTC11_00009464	chr10	+	1671	7	FSM	ENSG00000099284.15	ENST00000676896.1	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	111.676243370438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	70075563	True	NA	14	True	AATAAA	-9	NA	70075599	70112266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70109032_70109208_70111517
WTC11_00009474	chr10	+	2326	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	-104	34	-104	0	multi-exon	FALSE	canonical	3	86	junction_1	23.9382539045771	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	NA	False	NA	-20	True	NA	NA	NA	71319154	71363351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
WTC11_00009476	chr10	+	2676	6	FSM	ENSG00000198246.9	ENST00000479577.2	2621	6	-56	1	-33	0	multi-exon	FALSE	canonical	3	13	junction_1	51.9499759383967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	71318269	True	NA	-20	True	NA	NA	NA	71319225	71363351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71319732_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
WTC11_00009481	chr10	+	3571	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	227	junction_2	371.520776673391	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	72208246	True	NA	4	True	ATTAAA	-16	NA	72215995	72235858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
WTC11_00009482	chr10	+	1119	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208277	True	NA	20	True	AATAAA	-21	NA	72216026	72233829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
WTC11_00009483	chr10	+	684	3	ISM	ENSG00000166295.9	ENST00000621663.4	3567	5	48	11704	19	-9461	5prime_fragment	FALSE	canonical	3	227	junction_2	39.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCCACATTTCATT	72208298	True	NA	16	True	ATTAAA	-17	NA	72216047	72224154	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_72216139_72220053_72220380_72223887
WTC11_00009484	chr10	+	1043	3	NIC	ENSG00000166295.9	novel	3567	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208250	True	NA	20	True	AATAAA	-21	NA	72215999	72233829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_72216139_72230365_72230441_72233000
WTC11_00009485	chr10	+	1742	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	-4	6	0	4	multi-exon	FALSE	canonical	3	1075	junction_1	5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTGGTTGAGTCTC	72269619	True	NA	2	True	AATAAA	-11	NA	72273919	72276030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72274061_72274156_72274422_72274694
WTC11_00009495	chr10	+	1084	3	ISM	ENSG00000138286.15	ENST00000475829.5	1044	6	86	4158	86	-12	5prime_fragment	FALSE	canonical	3	38	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATAGGTCTTTTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	73210352	73231294	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_73210439_73228059_73228185_73230421
WTC11_00009504	chr10	+	2390	10	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_2	162.86993978003	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736193	True	NA	13	True	AATAAA	-17	NA	73744417	73772161	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_73744438_73746804_73747005_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
WTC11_00009512	chr10	+	6080	26	FSM	ENSG00000214655.11	ENST00000398706.6	6062	26	-18	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	23.0382638234742	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCCTTTCCCTTCTT	73784883	True	NA	21	True	TATAAA	-29	NA	73785605	73801797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
WTC11_00009514	chr10	+	3713	17	FSM	ENSG00000214655.11	ENST00000603187.5	3713	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_15	24.5979388110061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	73791799	False	NA	16	True	TATAAA	-24	NA	73792521	73801792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801084_73801196_73801315
WTC11_00009520	chr10	+	772	6	FSM	ENSG00000122861.16	ENST00000494287.1	750	6	-22	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_2	38.4551687033096	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTACGGCCCTGGGTT	73910533	True	NA	NA	False	NA	NA	NA	73911124	73913753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73911219_73911524_73911613_73912214_73912323_73912923_73913099_73913289_73913382_73913538
WTC11_00009525	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	50.3444137914029	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74174330	True	NA	7	True	AATAAA	-19	NA	74176762	74709290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
WTC11_00009534	chr10	+	8334	18	FSM	ENSG00000156650.14	ENST00000287239.10	8314	18	-20	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	11.5396113347801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGACTTTGATCTTCAT	74825648	True	NA	4	True	AATAAA	-18	NA	74826579	75032624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74826786_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
WTC11_00009541	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2672	junction_4	152.087775176129	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	75210457	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
WTC11_00009548	chr10	+	693	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	-115	5	-39	0	multi-exon	FALSE	canonical	3	102	junction_5	5899.16990629473	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	77943531	True	NA	13	True	AATAAA	-12	NA	78033720	78040696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
WTC11_00009550	chr10	+	535	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	-1	0	1	multi-exon	FALSE	canonical	3	4485	junction_4	4239.05690454846	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTTGTTTGAAATG	77943673	True	NA	15	True	AATAAA	-14	NA	78033862	78040698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
WTC11_00009551	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5910.82855338403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	77943727	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
WTC11_00009552	chr10	+	2158	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	-12	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	78038492	False	NA	30	True	AATAAA	-29	NA	78038555	78040713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78038600_78040700
WTC11_00009568	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	94.4504573249325	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	80078812	True	NA	22	True	AATAAA	-26	NA	80079269	80092557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
WTC11_00009573	chr10	+	1719	4	FSM	ENSG00000133665.13	ENST00000616870.4	1723	4	-2	6	-2	-6	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGTCTTTTTTGTGA	80356521	True	NA	1	True	TATAAA	-12	NA	80356765	80368067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
WTC11_00009583	chr10	+	14215	11	FSM	ENSG00000108219.15	ENST00000372158.6	16221	11	0	2006	0	-2005	multi-exon	TRUE	canonical	1	2	junction_1	94.4045020112918	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTTCCTGATGCAGA	80451350	True	NA	NA	False	NA	NA	NA	80454309	80531118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80454372_80463087_80463128_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
WTC11_00009602	chr10	+	3710	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	-111	2	-101	0	multi-exon	FALSE	canonical	3	144	junction_7	28.3783955383904	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	87095076	False	NA	4	True	AATAAA	-15	NA	87095094	87191463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
WTC11_00009603	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	50.8226081581809	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	87092216	True	NA	4	True	AATAAA	-15	NA	87095195	87191463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
WTC11_00009613	chr10	+	1858	10	NIC	ENSG00000138134.12	novel	2021	11	NA	NA	21	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	13.0052221230218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATGTCTTGTATTTAT	88879734	True	NA	3	True	AATAAA	-12	NA	88880265	88923483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88921282_88921396_88922336_88922437_88923167
WTC11_00009619	chr10	+	2069	4	FSM	ENSG00000232936.6	ENST00000660192.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAACATGCCTAAGTC	89645182	True	NA	NA	False	NA	NA	NA	89645271	89652144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_89645500_89648922_89648999_89650058_89650232_89650552
WTC11_00009622	chr10	+	6441	33	FSM	ENSG00000138182.15	ENST00000371728.8	6441	33	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_15	48.2739173234367	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTCTTTCTGTGCCT	89693328	True	NA	29	True	AATAAA	-13	NA	89701589	89774934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726292_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386_89738618_89738957_89739097_89743807_89743928_89745898_89745960_89751345_89751472_89752566_89752692_89754517_89754674_89758705_89758883_89760525_89760637_89762637_89762836_89768289_89768392_89768737_89768889_89772688_89772832_89773970
WTC11_00009632	chr10	+	1133	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	-167	7	-47	-7	multi-exon	FALSE	canonical	3	51	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATTTTATTGTGTAT	91219853	True	NA	NA	False	AATAAA	-28	NA	91220615	91227953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91220837_91222688_91222984_91227336
WTC11_00009634	chr10	+	5020	21	FSM	ENSG00000165338.17	ENST00000298068.10	4862	21	-214	56	-155	-56	multi-exon	TRUE	canonical	3	22	junction_7	8.86622805932715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTATTTTTTGAAC	91410119	False	NA	8	True	ATTAAA	-19	NA	91410129	91514764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91410577_91425280_91425411_91460426_91460566_91461253_91461357_91462094_91462185_91478200_91478266_91481093_91481140_91482966_91483077_91484506_91484656_91485179_91485304_91487681_91487779_91491199_91491308_91492351_91492485_91493419_91493509_91496213_91496373_91498107_91498183_91498871_91498960_91499043_91499151_91500501_91500618_91501190_91501335_91512263
WTC11_00009667	chr10	+	4987	10	FSM	ENSG00000119969.15	ENST00000371327.2	4987	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	173.895101060494	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTGCTCGGTTAA	94590664	False	NA	27	True	AATAAA	-19	NA	94590698	94613905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527_94601612_94607909_94608027_94609852
WTC11_00009671	chr10	+	4128	6	FSM	ENSG00000107443.16	ENST00000265992.9	4115	6	-13	0	-13	0	multi-exon	FALSE	canonical	2	8	junction_4	72.289971641992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	96043380	96060870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057120_96057248_96057829
WTC11_00009672	chr10	+	3959	6	FSM	ENSG00000107443.16	ENST00000465148.3	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_4	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	96040025	True	NA	NA	False	AATAAA	-18	NA	96043582	96060870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057087_96057248_96057829
WTC11_00009673	chr10	+	3740	5	NIC	ENSG00000107443.16	novel	3959	6	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	72.7302378656911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	96040033	True	NA	NA	False	AATAAA	-18	NA	96043590	96060870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_96043720_96044352_96044463_96056700_96057001_96057087_96057248_96057829
WTC11_00009686	chr10	+	1710	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	-523	0	-523	0	multi-exon	FALSE	canonical	3	120	junction_1	4365.83404275619	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	97368296	False	NA	NA	False	NA	NA	NA	97427010	97432690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
WTC11_00009687	chr10	+	1807	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	185	junction_6	135.091265446734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441093	True	NA	5	True	AATAAA	-18	NA	97446160	97457366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
WTC11_00009688	chr10	+	2000	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	-23	0	-18	0	multi-exon	FALSE	canonical	3	43	junction_2	197.708609359522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	97441084	True	NA	9	True	AATAAA	-22	NA	97446151	97457370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
WTC11_00009693	chr10	+	1729	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	-11	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	106.321315935339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441123	True	NA	5	True	AATAAA	-18	NA	97446190	97457366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
WTC11_00009694	chr10	+	2457	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	-43	-767	-9	763	multi-exon	FALSE	canonical	3	32	junction_4	189.873317091185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTAGTCTCAAACTCCTA	97441093	True	NA	NA	False	NA	NA	NA	97446160	97458133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
WTC11_00009708	chr10	+	2950	12	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	12.506527221435	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734259	True	NA	14	True	AATAAA	-16	NA	97737182	97760895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
WTC11_00009719	chr10	+	1232	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3513336598961	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727737	True	NA	NA	False	AATAAA	-17	NA	99732280	99756134	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
WTC11_00009720	chr10	+	1257	8	FSM	ENSG00000119929.13	ENST00000471520.5	831	8	0	-426	0	0	multi-exon	FALSE	canonical	3	86	junction_6	77.4188185739601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727737	True	NA	NA	False	AATAAA	-17	NA	99732280	99756134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99754528_99754635_99755624
WTC11_00009725	chr10	+	6760	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	-20	-4988	2	0	multi-exon	FALSE	canonical	3	11	junction_3	27.0102861065105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
WTC11_00009728	chr10	+	1027	3	FSM	ENSG00000235823.4	ENST00000657502.1	1015	3	-12	0	2	0	multi-exon	FALSE	canonical	3	44	junction_2	87.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100381215_100381449_100388033
WTC11_00009729	chr10	+	1154	4	FSM	ENSG00000235823.4	ENST00000661158.1	1133	4	-21	0	2	0	multi-exon	FALSE	canonical	3	44	junction_3	11.9536140513607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388033
WTC11_00009730	chr10	+	1151	4	FSM	ENSG00000235823.4	ENST00000641708.1	1184	4	33	0	2	0	multi-exon	FALSE	canonical	3	62	junction_1	79.5585039801249	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388036
WTC11_00009732	chr10	+	1553	3	NIC	ENSG00000235823.4	novel	1752	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373316	False	NA	13	True	TTTAAA	-14	NA	100373637	100383372	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100374013_100381215_100381449_100382427
WTC11_00009752	chr10	+	5741	4	FSM	ENSG00000107816.17	ENST00000370220.1	5741	4	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	62.5104435718989	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100998573	False	NA	NA	False	ATTAAA	-25	NA	100999475	101007836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101002947_101003506_101004167_101005457_101005716_101006484
WTC11_00009754	chr10	+	2820	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_1	93.9521154631443	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100998531	True	NA	NA	False	ATTAAA	-25	NA	100999852	101007836	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100999953_101002496_101002947_101003506_101004167_101005457_101005716_101006484
WTC11_00009763	chr10	+	693	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	-60	8	-44	0	multi-exon	FALSE	canonical	2	10	junction_5	242.784998621323	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAACGATGGGGACTGC	101583206	True	NA	NA	False	ACTAAA	-18	NA	101588264	101609439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
WTC11_00009768	chr10	+	4565	12	FSM	ENSG00000148840.11	ENST00000413464.6	4580	12	14	1	14	-1	multi-exon	FALSE	canonical	3	67	junction_7	107.094227452832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGCTGTTGTGCGTCTT	102125076	True	NA	13	True	AATAAA	-21	NA	102133007	102150330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
WTC11_00009769	chr10	+	5328	14	FSM	ENSG00000148840.11	ENST00000278070.7	5328	14	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_7	69.6324246038655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTGCGTCTTTAT	102125108	True	NA	16	True	AATAAA	-24	NA	102133039	102150333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
WTC11_00009776	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_2	207.306067338984	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127032	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
WTC11_00009782	chr10	+	6391	40	FSM	ENSG00000107862.7	ENST00000677240.1	6391	40	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	29.8792001385654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCAGCATCATTGTCT	102243747	True	NA	11	True	AATAAA	-6	NA	102245520	102382885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359266_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
WTC11_00009783	chr10	+	6352	40	FSM	ENSG00000107862.7	ENST00000677439.1	6352	40	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_15	30.1090937748406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCAGCATCATTGTCT	102243747	True	NA	11	True	AATAAA	-6	NA	102245520	102382885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362629_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
WTC11_00009784	chr10	+	6513	41	FSM	ENSG00000107862.7	ENST00000673650.1	6502	41	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	38.5602693844325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTCCCTCCGGTTTC	102243747	True	NA	25	True	AATAAA	-20	NA	102245520	102382899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102354369_102354469_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377141_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
WTC11_00009788	chr10	+	6373	40	FSM	ENSG00000107862.7	ENST00000676993.1	5736	40	-124	-513	0	0	multi-exon	FALSE	canonical	3	87	junction_17	22.795636109594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCTCTCCCTCCGGT	102243773	True	NA	22	True	AATAAA	-17	NA	102245546	102382896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
WTC11_00009796	chr10	+	3033	23	FSM	ENSG00000077150.20	ENST00000189444.11	3012	23	-21	0	-9	0	multi-exon	FALSE	canonical	3	23	junction_1	11.2544756937183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	102395166	True	NA	29	True	AATAAA	-42	NA	102395683	102402524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
WTC11_00009797	chr10	+	3036	23	FSM	ENSG00000077150.20	ENST00000661543.1	3015	23	-21	0	-9	0	multi-exon	FALSE	canonical	3	23	junction_1	11.7849182229094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	102395166	True	NA	29	True	AATAAA	-42	NA	102395683	102402524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
WTC11_00009798	chr10	+	3123	22	FSM	ENSG00000077150.20	ENST00000652277.1	3114	22	-9	0	-9	0	multi-exon	TRUE	canonical	3	27	junction_5	10.6970231305198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCCCCTGATGTGAC	102395166	True	NA	28	True	AATAAA	-41	NA	102395683	102402523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
WTC11_00009801	chr10	+	1464	4	NIC	ENSG00000269609.6	novel	1483	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	67.9264307909668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTGTGGTGATTTG	NA	False	NA	6	True	AATAAA	-19	NA	102449815	102456292	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102450023_102450186_102450331_102451398_102451556_102455336
WTC11_00009806	chr10	+	1177	2	FSM	ENSG00000269609.6	ENST00000657934.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGGACTGTAAGAAAA	102449202	False	NA	-36	True	NA	NA	NA	102450067	102456250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102450331_102455336
WTC11_00009809	chr10	+	2453	1	FSM	ENSG00000269609.6	ENST00000598368.1	2453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTGTGGTGATTTG	102453628	False	NA	6	True	AATAAA	-19	NA	102453839	102456292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102453800_102456300
WTC11_00009811	chr10	+	2746	9	NIC	ENSG00000138111.14	novel	2852	10	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	46	junction_1	32.47691487811	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102459018	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102461451_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
WTC11_00009813	chr10	+	2942	11	NIC	ENSG00000138111.14	novel	2852	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	44.6828826285861	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102459018	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102461451_102465981_102466088_102468752_102468843_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
WTC11_00009815	chr10	+	1328	7	NIC	ENSG00000138111.14	novel	823	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	57.127537629024	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCACTAATGTGTTT	102463605	False	NA	8	True	AATAAA	-20	NA	102465981	102472250	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102466088_102468752_102468843_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472021
WTC11_00009818	chr10	+	1839	11	FSM	ENSG00000107882.12	ENST00000369899.6	1839	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	15.511286213593	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGCCTGTGTTATGG	102503150	True	NA	10	True	AATAAA	-24	NA	102504006	102619462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102619065
WTC11_00009826	chr10	+	4107	4	FSM	ENSG00000166272.18	ENST00000369889.5	4107	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	30.0037034751082	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTTCTTGCTGCACT	102776234	True	NA	19	True	AATAAA	-21	NA	102776248	102816267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102776418_102797992_102798096_102809892_102810055_102812594
WTC11_00009829	chr10	+	2393	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	64	junction_3	2.34520787991171	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	102853640	True	NA	NA	False	AAGAAA	-22	NA	102854251	102864961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
WTC11_00009832	chr10	+	2054	2	FSM	ENSG00000148842.18	ENST00000369875.3	2059	2	0	5	0	-5	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGCTGTGCGTGGTGGT	102917377	True	NA	4	True	AATAAA	-11	NA	102918316	102927613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102920102_102927344
WTC11_00009833	chr10	+	15780	7	FSM	ENSG00000148842.18	ENST00000433628.2	3857	7	0	-11923	0	52	multi-exon	TRUE	canonical	2	39	junction_5	8.5374989832438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCAATCACAGCCCACT	102917417	False	NA	63	True	NA	NA	NA	102918356	103090274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103076085_103076271_103076970
WTC11_00009846	chr10	+	874	5	FSM	ENSG00000148834.13	ENST00000493946.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	462.504256737168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATATTTGAATATTTT	104254140	False	NA	NA	False	AATGAA	-10	NA	104254163	104266190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083
WTC11_00009847	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	423.71811384457	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104253255	True	NA	32	True	AATAAA	-32	NA	104254193	104267459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
WTC11_00009848	chr10	+	877	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	23	0	23	0	multi-exon	FALSE	canonical	3	62	junction_3	459.908143002491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104254700	False	NA	32	True	AATAAA	-32	NA	104254732	104267459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
WTC11_00009849	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	105.281717311222	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	104244589	True	NA	28	True	AATAAA	-28	NA	104254891	104267455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
WTC11_00009852	chr10	+	917	6	ISM	ENSG00000065621.15	ENST00000338595.7	6715	7	5722	5491	8	41	3prime_fragment	FALSE	canonical	3	58	junction_1	29.9559676859219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTACTGCTGCTTTTT	104274392	True	NA	59	True	NA	NA	NA	104274905	104299459	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
WTC11_00009861	chr10	+	2256	6	FSM	ENSG00000119950.21	ENST00000652649.1	2256	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTACTTAAAAAAAAAA	110226107	True	NA	-78	True	TTTAAA	-15	NA	110226203	110286482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110226351_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
WTC11_00009870	chr10	+	2423	3	FSM	ENSG00000151532.14	ENST00000483122.1	2423	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	112446843	True	NA	8	True	AATAAA	-18	NA	112446997	112450726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112447468_112448381_112448490_112448881
WTC11_00009871	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	12.437599348388	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	112445063	True	NA	15	True	ATTAAA	-18	NA	112447214	112818744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
WTC11_00009877	chr10	+	4076	15	FSM	ENSG00000148737.17	ENST00000355995.8	4073	15	-3	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	57.7033670718492	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938853	True	NA	13	True	AATAAA	-25	NA	112950246	113167678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
WTC11_00009878	chr10	+	3887	12	NIC	ENSG00000148737.17	novel	1755	13	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	41.3948932850738	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCACTTGTTTCTGTG	112938865	True	NA	14	True	AATAAA	-26	NA	112950258	113167679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
WTC11_00009879	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	52.3273718636226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112950438	False	NA	13	True	AATAAA	-25	NA	112950451	113167678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
WTC11_00009883	chr10	+	3430	13	NIC	ENSG00000148737.17	novel	2160	15	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	57.9156474730467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGGTCACTTGTTTC	112950760	False	NA	10	True	AATAAA	-22	NA	112950772	113167675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144014_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
WTC11_00009889	chr10	+	883	3	FSM	ENSG00000151553.15	ENST00000369246.1	666	3	-63	-154	-37	154	multi-exon	FALSE	canonical	3	65	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAGAATTCCAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	114821706	114833619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_114822124_114830851_114830931_114833232
WTC11_00009891	chr10	+	977	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	-191	-202	0	202	multi-exon	FALSE	canonical	3	213	junction_2	16.739839372653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTAGTACTTTAAAACT	114934188	True	NA	NA	False	AATAAA	-7	NA	114938194	114960202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
WTC11_00009892	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	21.2861936667016	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	114934188	True	NA	11	True	AATAAA	-20	NA	114938194	114977676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
WTC11_00009896	chr10	+	1583	7	FSM	ENSG00000107518.18	ENST00000527407.5	1583	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	38.1608438061844	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGTTTTTCTCTTTA	115092076	True	NA	-25	True	NA	NA	NA	115093462	115171327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115171036
WTC11_00009899	chr10	+	1405	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	473	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	14.6363322667334	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324966	True	NA	24	True	ATTAAA	-21	NA	116325480	116380029	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
WTC11_00009908	chr10	+	2450	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	-9	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	59.9998697915254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098482	True	NA	26	True	AATAAA	-23	NA	119104103	119137984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
WTC11_00009909	chr10	+	2573	4	FSM	ENSG00000151929.10	ENST00000369085.8	2561	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	109	junction_3	11.5758369027902	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTGTGGTTTCTAAA	119648876	True	NA	NA	False	AATAAA	-20	NA	119651367	119677819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119651856_119669850_119670178_119672254_119672657_119676463
WTC11_00009910	chr10	+	2570	4	NIC	ENSG00000151929.10	novel	2561	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	44.3796750276019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTGTGGTTTCTAAA	119648876	True	NA	NA	False	AATAAA	-20	NA	119651367	119677819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119651856_119669850_119670178_119672254_119672657_119676466
WTC11_00009911	chr10	+	5003	20	FSM	ENSG00000198825.15	ENST00000650623.2	4979	20	-24	0	-16	0	multi-exon	TRUE	canonical	3	43	junction_12	58.5939121188893	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	119724567	True	NA	11	True	AATAAA	-23	NA	119726025	119829147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868_119792037_119792156_119792214_119796714_119796914_119797460_119797641_119798542_119798611_119804172_119804298_119805383_119805462_119806359_119806481_119807931_119808061_119810099_119810218_119811756_119811956_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
WTC11_00009912	chr10	+	874	5	FSM	ENSG00000198825.15	ENST00000369081.3	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.5971226873441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGAGATTGGTGTGA	119724703	True	NA	5	True	AATAAA	-15	NA	119726161	119792197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868
WTC11_00009913	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	42.0123791280618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	119804737	True	NA	11	True	AATAAA	-23	NA	119818726	119829147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
WTC11_00009916	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	TRUE	canonical	1	51	junction_28	30.8055123612112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	120847039	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
WTC11_00009917	chr10	+	4564	29	NNC	ENSG00000120008.16	novel	4545	29	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.1672116688732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	120847065	True	NA	15	True	AATAAA	-17	NA	120851387	120909524	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_120851552_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
WTC11_00009919	chr10	+	4954	26	FSM	ENSG00000120008.16	ENST00000497136.6	4954	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	45.1973450547706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTTTGTGTTCTCT	120852597	False	NA	11	True	AATAAA	-13	NA	120852615	120909520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906856_120908555
WTC11_00009922	chr10	+	2229	1	FSM	ENSG00000120008.16	ENST00000604714.1	2229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGTGTTCTCTGCA	120907282	False	NA	14	True	AATAAA	-16	NA	120907294	120909523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_120907300_120909500
WTC11_00009929	chr10	+	3233	4	FSM	ENSG00000138162.19	ENST00000465600.1	3109	4	-88	-36	-88	31	multi-exon	FALSE	canonical	3	125	junction_2	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTTTCTCACCTTTG	122246373	False	NA	NA	False	NA	NA	NA	122246384	122254576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122248804_122249049_122249157_122249543_122249665_122253990
WTC11_00009935	chr10	+	1351	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	354	0	-7	0	multi-exon	FALSE	canonical	3	29	junction_6	15.1299922890485	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122980079	True	NA	16	True	ATTAAA	-17	NA	122980393	122990390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
WTC11_00009940	chr10	+	8212	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	-509	0	509	multi-exon	TRUE	canonical	3	1332	junction_7	487.877619315102	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTTGACTTCCCCAC	123126533	True	NA	NA	False	NA	NA	NA	123154401	123170976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
WTC11_00009943	chr10	+	863	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	-23	0	-12	0	multi-exon	FALSE	canonical	3	47	junction_5	127.678659140829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	124458706	True	NA	4	True	AATAAA	-22	NA	124461810	124498514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
WTC11_00009958	chr10	+	1380	4	FSM	ENSG00000107938.18	ENST00000368812.1	1380	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	19.2584757675391	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTTCCAATTTCC	125749286	False	NA	19	True	AATAAA	-23	NA	125749296	125764143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125749566_125752798_125752915_125753693_125753846_125763300
WTC11_00009960	chr10	+	2359	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	644	junction_6	411.948891112586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	125800814	True	NA	16	True	AATAAA	-20	NA	125823523	125842805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
WTC11_00009961	chr10	+	1455	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	551	junction_7	509.475320345173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	125800814	True	NA	5	True	ATTAAA	-18	NA	125823523	125853695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
WTC11_00009964	chr10	+	6859	52	FSM	ENSG00000150760.13	ENST00000623213.2	6840	52	-19	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	26.4020608984363	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGTGTCTGACCAATT	126900731	True	NA	12	True	AATAAA	-17	NA	126905408	127452516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012231_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
WTC11_00009969	chr10	+	4678	5	FSM	ENSG00000170430.10	ENST00000651593.1	4678	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	7.88986691902975	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTCACATCAGTTT	129464046	True	NA	NA	False	ATTAAA	-17	NA	129467240	129770983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_129467297_129536240_129536378_129707894_129708044_129759201_129759342_129766787
WTC11_00009971	chr10	+	3850	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	-23	0	-15	0	multi-exon	FALSE	canonical	3	334	junction_11	528.628820394865	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	130106996	True	NA	30	True	NA	NA	NA	130136375	130182881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
WTC11_00009973	chr10	+	5374	9	FSM	ENSG00000175470.20	ENST00000455566.6	5374	9	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	37.4130241359877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTGCGTATTTGGAC	131898300	True	NA	9	True	AATAAA	-20	NA	131901007	131959834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_131901156_131901237_131901331_131934457_131934556_131940030_131940197_131940581_131940695_131943967_131944146_131945294_131945460_131947529_131947792_131955683
WTC11_00009974	chr10	+	2455	7	FSM	ENSG00000175470.20	ENST00000649083.1	2455	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	100.604837524511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGGTGTGTGCTGATC	131940145	False	NA	NA	False	NA	NA	NA	131940162	131957483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_131940197_131940581_131940695_131943967_131943998_131944094_131944146_131945294_131945460_131947529_131947792_131955683
WTC11_00009979	chr10	+	2421	13	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	20.8919176291269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	132186590	True	NA	24	True	ATTAAA	-17	NA	132187010	132205759	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132203761_132203928_132204838
WTC11_00009980	chr10	+	1296	2	FSM	ENSG00000151640.13	ENST00000471544.1	444	2	0	-852	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	132203540	False	NA	24	True	ATTAAA	-17	NA	132203552	132205759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132203928_132204838
WTC11_00009985	chr10	+	2615	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132397056	True	NA	72	True	AATAAA	-18	NA	132397199	132417859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132397352_132404625_132406290_132417060
WTC11_00009990	chr10	+	7160	30	FSM	ENSG00000171798.19	ENST00000304613.8	7021	30	-139	0	-139	0	multi-exon	FALSE	canonical	3	22	junction_12	7.0910504463597	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTGTGGTCACTCT	133160054	False	NA	6	True	AATAAA	-16	NA	133160079	133226412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133183343_133183491_133183871_133183990_133185973_133186675_133188538_133188654_133189597_133189670_133189751_133189814_133195662_133195822_133197057_133197136_133197674_133197769_133198336_133198500_133198577_133199267_133199457_133199603_133200374_133200461_133201500_133201899_133206684_133206779_133206855_133206954_133207136_133207352_133210610_133210725_133211421_133211570_133211678_133211859_133212715_133212923_133213644_133213728_133213971_133214123_133218830_133218954_133219030_133219091_133219954_133220113_133224658
WTC11_00010000	chr10	+	1059	6	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_5	190.659277246086	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304055	True	NA	14	True	TTTAAA	-27	NA	133308913	133313161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311817_133312787
WTC11_00010001	chr10	+	1851	7	FSM	ENSG00000148832.16	ENST00000278060.10	1830	7	-21	0	-20	0	multi-exon	TRUE	canonical	3	13	junction_5	4.24264068711928	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCAGAGCCATCTTTCC	133378931	True	NA	5	True	CATAAA	-17	NA	133379240	133391694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133383959_133384213_133388955_133389069_133389589_133389748_133391311
WTC11_00010006	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	39.8859485143439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	133380333	True	NA	-11	True	NA	NA	NA	133394195	133421307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
WTC11_00010007	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	35.9421757827764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	133380361	True	NA	-68	True	NA	NA	NA	133394223	133399804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
WTC11_00010010	chr10	-	7886	37	FSM	ENSG00000151240.17	ENST00000280886.12	7885	37	0	-1	0	1	multi-exon	TRUE	canonical	3	21	junction_5	20.9476677448975	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGCAAGTGTACAGAT	-689657	False	NA	-8	True	AATATA	-22	NA	689668	274199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_277578_281199_281324_283271_283447_286272_286348_288363_288422_310030_310093_327005_327177_329432_329602_341198_341330_344808_344919_344998_345111_348640_348763_349330_349455_356425_356507_357827_357938_362489_362692_363196_363312_364373_364583_366274_366412_369493_369634_382646_382762_384026_384147_384545_384640_387744_387810_389990_390094_390263_390374_390739_390864_399108_399220_408925_409018_413912_414111_415768_415889_419064_419200_422823_423034_440870_440997_472438_472550_486458_486531_689493
WTC11_00010012	chr10	-	1826	4	ISM	ENSG00000107929.16	ENST00000688365.1	3396	16	49254	-38	705	19	3prime_fragment	FALSE	canonical	2	4	junction_1	105.085150658354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGCTCTGTTTCTTTT	-814993	False	NA	-6	True	NA	NA	NA	815010	806913	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_808273_812920_813214_814741_814851_814945
WTC11_00010014	chr10	-	5963	18	FSM	ENSG00000107929.16	ENST00000316157.8	5963	18	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	23.2480233188823	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAAACATAGTTTT	-924634	True	NA	-8	True	ATTAAA	-18	NA	931705	809496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
WTC11_00010020	chr10	-	2498	4	FSM	ENSG00000067064.12	ENST00000491735.1	1066	4	-556	-876	-540	-608	multi-exon	FALSE	canonical	3	289	junction_3	326.02283491941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTTTGTTAAATTCAA	-1048910	False	NA	-4	True	AATAAA	-20	NA	1049659	1040026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1048863
WTC11_00010023	chr10	-	689	1	FSM	ENSG00000273001.1	ENST00000607898.1	578	1	-114	3	-114	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACGCTGCGATAATATT	-3066082	False	NA	NA	False	AATAAA	-13	NA	3066115	3065426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3065400_3066100
WTC11_00010024	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_23	20.5429626298026	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3167226	True	NA	-1	True	AATAAA	-18	NA	3172782	3137727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
WTC11_00010025	chr10	-	3404	27	FSM	ENSG00000107959.17	ENST00000677922.1	3386	27	0	-18	0	0	multi-exon	FALSE	canonical	2	6	junction_4	33.181676700237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3167250	True	NA	-1	True	AATAAA	-18	NA	3172806	3137727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140766_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
WTC11_00010028	chr10	-	3489	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_10	34.4304676208691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3172827	False	NA	-1	True	AATAAA	-18	NA	3172841	3137727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
WTC11_00010029	chr10	-	673	4	FSM	ENSG00000107959.17	ENST00000455371.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	12.4988888395018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGCCAACCCATGGC	-3144354	False	NA	NA	False	NA	NA	NA	3144366	3138690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3139050_3140686_3140813_3143388_3143502_3144291
WTC11_00010030	chr10	-	1844	15	FSM	ENSG00000107959.17	ENST00000430362.2	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	20.3034379314621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGAGTCATGTCTTGG	-3172793	False	NA	NA	False	ATTAAA	-18	NA	3172807	3151175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
WTC11_00010037	chr10	-	2781	7	FSM	ENSG00000196372.13	ENST00000459912.5	2780	7	0	-1	0	0	multi-exon	FALSE	canonical	2	4	junction_3	47.9223909624254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	-5665310	True	NA	-16	True	AATAAA	-20	NA	5666578	5638866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5640831_5641769_5641962_5642472_5642554_5648969_5649105_5651212_5651364_5652862_5653051_5666508
WTC11_00010045	chr10	-	1646	7	FSM	ENSG00000134461.16	ENST00000380092.8	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	15.0222057856583	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTCTTAAGTCAGTC	-5888976	True	NA	1	True	AATAAA	-18	NA	5889871	5878086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
WTC11_00010055	chr10	-	1823	3	FSM	ENSG00000148429.15	ENST00000606752.1	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	98.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATGGAGCGCTTTTA	-11610310	True	NA	-6	True	AATAAA	-15	NA	11611666	11564126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_11565639_11597630_11597718_11611442
WTC11_00010059	chr10	-	5372	22	FSM	ENSG00000151461.20	ENST00000397053.6	5369	22	0	-3	0	2	multi-exon	FALSE	canonical	3	15	junction_21	45.2060036548234	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTGGTGTTGTTTTG	-12042908	True	NA	-5	True	AATAAA	-16	NA	12043170	11920019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042913
WTC11_00010061	chr10	-	920	9	NIC	ENSG00000165609.13	novel	3195	10	NA	NA	0	2	combination_of_known_splicesites	TRUE	canonical	3	37	junction_2	449.34723488634	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTGGTATGGAATT	-12186802	True	NA	-1	True	AATAAA	-14	NA	12195869	12167573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_12167812_12170716_12170771_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
WTC11_00010065	chr10	-	1258	8	FSM	ENSG00000165609.13	ENST00000378927.7	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_3	106.797538762437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCTGTGTGGCCCTT	-12195804	False	NA	-27	True	AATAAA	-3	NA	12195822	12170231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
WTC11_00010072	chr10	-	1565	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	-24	0	21	multi-exon	FALSE	canonical	3	331	junction_4	59.1164105811576	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCCAACCATTCCCTTA	-13295661	True	NA	17	True	AATAAA	-44	NA	13300064	13277774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
WTC11_00010077	chr10	-	2993	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	-5	0	5	multi-exon	FALSE	canonical	3	141	junction_7	1549.1114240369	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAACCTACTGTTGAGCT	-13348201	False	NA	-23	True	AATAAA	-23	NA	13348298	13317433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
WTC11_00010078	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1538.69507395463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	-13348183	False	NA	-18	True	AATAAA	-17	NA	13348280	13318079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
WTC11_00010088	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	5.10829468181046	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-14953723	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
WTC11_00010089	chr10	-	5377	2	NNC	ENSG00000152457.18	novel	294	2	NA	NA	-2094	13	intron_retention	TRUE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	14913416	14907865	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_14912841_14913014
WTC11_00010090	chr10	-	2637	13	FSM	ENSG00000152457.18	ENST00000378246.6	2637	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	7.8541390362025	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-14953722	True	NA	NA	False	NA	NA	NA	14954095	14907878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14949035_14949088_14953901
WTC11_00010100	chr10	-	4183	8	FSM	ENSG00000148468.17	ENST00000378116.9	4182	8	0	-1	0	1	multi-exon	FALSE	canonical	3	155	junction_1	9.8519655140381	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGGTCATTTGAA	-15371276	False	NA	-2	True	AATAAA	-20	NA	15371289	15211641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15214602_15215995_15216111_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
WTC11_00010104	chr10	-	3754	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	-24	0	24	multi-exon	FALSE	canonical	3	607	junction_7	42.4645072383985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGGAAATATATATTT	-16807272	True	NA	24	True	NA	NA	NA	16817424	16590586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
WTC11_00010105	chr10	-	3719	8	FSM	ENSG00000148484.18	ENST00000602389.1	3639	8	0	-80	0	71	multi-exon	FALSE	canonical	3	121	junction_7	210.230097458834	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGGTTTTTTCTCTTTTT	-16807302	True	NA	71	True	TATAAA	-7	NA	16817454	16590539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
WTC11_00010108	chr10	-	8230	12	FSM	ENSG00000107614.22	ENST00000354631.7	8230	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	58.1281002016912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGACAAAAGGTTCAGG	-17199757	True	NA	NA	False	AATAAA	-10	NA	17201672	17142253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17169309_17169540_17174550_17174661_17201570
WTC11_00010115	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_1	19.7033556081755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	-17614179	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
WTC11_00010118	chr10	-	721	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	-4	0	4	multi-exon	FALSE	canonical	3	207	junction_1	14.7711712467224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGACAAATTGTGGTAT	-17617224	False	NA	0	True	AATAAA	-19	NA	17617235	17599069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
WTC11_00010119	chr10	-	773	2	FSM	ENSG00000165996.14	ENST00000326961.6	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTATTATGTGCT	-17614172	True	NA	NA	False	AATAAA	-17	NA	17617367	17615476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17615965_17617082
WTC11_00010129	chr10	-	3839	10	FSM	ENSG00000150867.14	ENST00000376573.9	3820	10	0	-19	0	19	multi-exon	FALSE	canonical	3	41	junction_7	6.36735501417529	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTCAGTTTGGGAAT	-22709583	True	NA	3	True	AAGAAA	-36	NA	22714578	22534834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_22537282_22539970_22540075_22541803_22542048_22550658_22550773_22567850_22567890_22573310_22573458_22591628_22591782_22607926_22608024_22609619_22609718_22714182
WTC11_00010136	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.9131825880731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-24951591	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
WTC11_00010141	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	84.2576962360116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857452	True	NA	-13	True	AATAAA	-25	NA	26860986	26746592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
WTC11_00010142	chr10	-	3142	9	NIC	ENSG00000136754.18	novel	3516	10	NA	NA	1	16	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	76.6794260215868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATAACTCATGTGGA	-26857436	True	NA	14	True	AATAAA	-32	NA	26860970	26746878	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
WTC11_00010160	chr10	-	4126	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	45	2	-10	0	multi-exon	FALSE	canonical	3	140	junction_5	12.9142115324216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	-27240611	False	NA	-4	True	AATAAA	-15	NA	27240834	27195216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
WTC11_00010170	chr10	-	1434	12	NNC	ENSG00000150054.19	novel	843	9	NA	NA	50	5207	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.6050193127461	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAACATCTGTTTTTAGT	-28301289	True	NA	NA	False	AATAAA	-17	NA	28303014	28118864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_28119062_28119650_28119716_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
WTC11_00010177	chr10	-	6855	36	NIC	ENSG00000197321.16	novel	6729	36	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_35	21.8160397835339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-29732878	True	NA	-6	True	AATAAA	-42	NA	29735934	29457337	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
WTC11_00010184	chr10	-	2566	10	NNC	ENSG00000107951.15	novel	5560	9	NA	NA	0	18123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	308.97249068485	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTGAGCATTCTATGAC	-30348960	True	NA	NA	False	NA	NA	NA	30349278	30291677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_30291705_30312825_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337032_30340225_30340451_30341467_30341641_30349118
WTC11_00010186	chr10	-	5571	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	-11	0	11	multi-exon	FALSE	canonical	3	640	junction_5	76.2789903905394	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTTCCTATTGGCGTC	-30348960	True	NA	NA	False	AATAAA	-29	NA	30349278	30309789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
WTC11_00010192	chr10	-	4914	18	FSM	ENSG00000165322.18	ENST00000375250.9	4914	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	40.5789418175381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	-31921000	True	NA	-6	True	AATAAA	-18	NA	31928814	31805436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
WTC11_00010193	chr10	-	5021	20	FSM	ENSG00000165322.18	ENST00000344936.7	5060	20	0	39	0	0	multi-exon	TRUE	canonical	3	81	junction_16	32.1572486798743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	-31921017	True	NA	-6	True	AATAAA	-18	NA	31928831	31805436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
WTC11_00010194	chr10	-	4920	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	38	0	-5	multi-exon	FALSE	canonical	3	55	junction_15	33.2636772203889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTTAGTAAGTCT	-31921062	True	NA	-11	True	AATAAA	-13	NA	31928876	31805441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
WTC11_00010202	chr10	-	872	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGTCTTTTGGTTTTA	-32344373	True	NA	0	True	ATTAAA	-17	NA	32347121	32345110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32345624_32346762
WTC11_00010205	chr10	-	5266	16	FSM	ENSG00000150093.20	ENST00000678701.1	4090	16	-428	-748	0	692	multi-exon	FALSE	canonical	3	13	junction_15	496.65277832931	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTTATAATGATATTTT	-32957867	False	28895	NA	False	NA	NA	NA	32957894	32899584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957010
WTC11_00010206	chr10	-	4592	16	FSM	ENSG00000150093.20	ENST00000396033.6	3784	16	-74	-734	-74	692	multi-exon	FALSE	canonical	3	122	junction_15	471.02679329312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTTATAATGATATTTT	-32957941	False	NA	NA	False	NA	NA	NA	32957968	32899584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957758
WTC11_00010207	chr10	-	4865	17	FSM	ENSG00000150093.20	ENST00000676964.1	3955	17	-587	-323	-494	267	multi-exon	FALSE	canonical	3	74	junction_14	618.876754693533	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTATTTGGCTTTGGTT	-32958792	True	NA	NA	False	AAGAAA	-17	NA	32958819	32900009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933350_32933584_32935491_32935559_32958144
WTC11_00010208	chr10	-	4289	16	FSM	ENSG00000150093.20	ENST00000437302.6	4274	16	0	-15	0	0	multi-exon	FALSE	canonical	3	3	junction_15	499.012072888912	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32957838	False	NA	-1	True	ATTAAA	-18	NA	32957865	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957225
WTC11_00010209	chr10	-	3735	16	FSM	ENSG00000150093.20	ENST00000302278.8	3735	16	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_10	165.24481501363	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929335	True	NA	-1	True	ATTAAA	-18	NA	32958230	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
WTC11_00010210	chr10	-	3854	17	FSM	ENSG00000150093.20	ENST00000679187.1	3839	17	0	-15	0	0	multi-exon	FALSE	canonical	3	75	junction_14	618.716132280184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929352	True	NA	-1	True	ATTAAA	-18	NA	32958247	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933481_32933584_32935491_32935559_32958144
WTC11_00010211	chr10	-	3756	16	FSM	ENSG00000150093.20	ENST00000678479.1	3741	16	0	-15	0	0	multi-exon	FALSE	canonical	1	2	junction_13	499.225729393917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929352	True	NA	-1	True	ATTAAA	-18	NA	32958247	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932510_32932601_32935491_32935559_32958144
WTC11_00010212	chr10	-	3933	17	FSM	ENSG00000150093.20	ENST00000677999.1	3918	17	0	-15	0	0	multi-exon	FALSE	canonical	2	6	junction_16	641.520264683821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929356	True	NA	-1	True	ATTAAA	-18	NA	32958251	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32938553_32938731_32958144
WTC11_00010213	chr10	-	5629	15	FSM	ENSG00000150093.20	ENST00000676623.1	5614	15	0	-15	0	0	multi-exon	FALSE	canonical	3	1456	junction_9	170.712133877652	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929358	True	NA	-1	True	ATTAAA	-18	NA	32958253	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
WTC11_00010214	chr10	-	3997	17	FSM	ENSG00000150093.20	ENST00000417122.7	3982	17	0	-15	0	0	multi-exon	FALSE	canonical	3	21	junction_15	636.710577401538	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929380	True	NA	-1	True	ATTAAA	-18	NA	32958275	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32953592_32953810_32958144
WTC11_00010215	chr10	-	3780	17	FSM	ENSG00000150093.20	ENST00000678766.1	3780	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	636.671962238012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAATACTTAAATCGGA	-32929358	True	NA	-20	True	ATTAAA	-5	NA	32958253	32900411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32906464_32906581_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
WTC11_00010217	chr10	-	4489	15	FSM	ENSG00000150093.20	ENST00000676460.1	4489	15	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_9	163.335153745235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCCACCAGTATTATC	-32929358	True	NA	NA	False	NA	NA	NA	32958253	32906318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
WTC11_00010230	chr10	-	3397	21	FSM	ENSG00000148498.16	ENST00000374773.6	3395	21	0	-2	0	-2	multi-exon	FALSE	canonical	3	35	junction_4	64.4641567074293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	-34811815	True	NA	NA	False	AATAAA	-16	NA	34815296	34312261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00010232	chr10	-	3516	21	FSM	ENSG00000148498.16	ENST00000340077.9	3518	21	0	2	0	-2	multi-exon	FALSE	canonical	3	115	junction_9	52.7907188812579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	-34811844	True	NA	NA	False	AATAAA	-16	NA	34815325	34312261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00010233	chr10	-	3444	20	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	80	junction_6	56.7739845224867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTAGTGGCTGTTGACG	-34811803	True	NA	NA	False	AATAAA	-15	NA	34815284	34312262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00010234	chr10	-	5043	15	NIC	ENSG00000148498.16	novel	799	5	NA	NA	11	2322	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	67.9053963771868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGTATTTCATTGTT	-34811804	True	NA	NA	False	AATAAA	-15	NA	34815285	34343875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00010252	chr10	-	6019	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	19.2499350648255	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTGTTTCTGTACTAA	-42636544	True	NA	-2	True	AATAAA	-29	NA	42638521	42589099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
WTC11_00010260	chr10	-	3068	4	FSM	ENSG00000169813.17	ENST00000544000.5	2676	4	68	-460	0	460	multi-exon	FALSE	canonical	3	218	junction_3	975.162322670208	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCCTTCGTTCCAGT	-43397266	False	NA	NA	False	NA	NA	NA	43397278	43385156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43397184
WTC11_00010261	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	946.893986791669	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43407800	False	17390	-1	True	TATAAA	-19	NA	43407819	43385616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
WTC11_00010262	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1049.60638124754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43408863	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
WTC11_00010264	chr10	-	2206	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	-20	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1017.09531947054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	-43391796	True	NA	-32	True	AATAAA	-14	NA	43409186	43386021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
WTC11_00010265	chr10	-	3185	2	NNC	ENSG00000196793.14	novel	701	2	NA	NA	0	1230	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTAGGAGGTATAAGCC	-43572547	True	NA	NA	False	NA	NA	NA	43574597	43555113	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_43558172_43574470
WTC11_00010267	chr10	-	3520	2	FSM	ENSG00000196793.14	ENST00000535642.5	1904	2	34	-1650	13	1647	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAAACAGTCTTAAA	-43572534	True	NA	NA	False	NA	NA	NA	43574584	43554696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43558172_43574539
WTC11_00010268	chr10	-	3643	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	34	-1650	13	1647	multi-exon	FALSE	canonical	3	16	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAAACAGTCTTAAA	-43572534	True	NA	NA	False	NA	NA	NA	43574584	43554696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43558172_43567898_43568022_43574539
WTC11_00010271	chr10	-	1181	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	-22	0	20	multi-exon	FALSE	canonical	3	77	junction_2	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTTATTCTGACCTGA	-43646240	True	NA	7	True	AATAAA	-43	NA	43648881	43643839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43644802_43646063_43646203_43648801
WTC11_00010272	chr10	-	2275	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	-1078	4	-901	-2	multi-exon	FALSE	canonical	3	27	junction_2	53.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGTATGTTTTATAAT	NA	False	NA	-17	True	AATAAA	-19	NA	43649782	43643863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43644802_43646063_43646203_43648584
WTC11_00010273	chr10	-	1149	3	NNC	ENSG00000169740.14	novel	1159	3	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATGTTTTATAA	-43646225	True	NA	-18	True	AATAAA	-18	NA	43648866	43643864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_43644802_43646055_43646203_43648801
WTC11_00010274	chr10	-	1148	3	NNC	ENSG00000169740.14	novel	1159	3	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	28.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATGTTTTATAA	-43646228	True	NA	-18	True	AATAAA	-18	NA	43648869	43643864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_43644802_43646059_43646203_43648801
WTC11_00010279	chr10	-	6178	4	FSM	ENSG00000107562.17	ENST00000374426.6	470	4	-6	-5702	0	0	multi-exon	FALSE	canonical	2	2	junction_1	97.6877110433492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCAACAGTTTGAAATT	-44378206	True	NA	-29	True	AATAAA	-19	NA	44385049	44370164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44376033_44378636_44378724_44380762_44380881_44384944
WTC11_00010280	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	195	junction_2	13	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	-44378249	True	NA	-12	True	AATAAA	-21	NA	44385092	44377132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44378724_44380762_44380881_44384944
WTC11_00010281	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	85.0463925683441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	-44378206	True	NA	-43	True	ACTAAA	-28	NA	44385049	44377163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
WTC11_00010293	chr10	-	4945	24	Fusion	ENSG00000188234.15_ENSG00000239883.9	novel	1758	12	NA	NA	0	-9	multi-exon	FALSE	canonical	2	7	junction_23	44.6072972066586	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCATAAATATGCATTGA	-45969328	True	NA	-36	True	GATAAA	-26	NA	45972422	45825621	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_45827391_45828028_45828081_45831393_45831430_45834015_45834117_45841652_45841688_45844325_45844395_45846686_45846756_45847124_45847313_45847859_45847955_45848842_45848913_45854802_45854896_45862985_45863115_45888164_45888313_45892431_45892508_45896183_45896245_45900346_45900427_45910548_45910707_45916078_45916172_45939360_45939448_45946836_45946912_45953122_45953207_45962810_45962995_45963884_45964872_45972216
WTC11_00010296	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_9	127.27378867603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46014827	False	8628	0	True	ATTAAA	-16	NA	46023455	46005087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
WTC11_00010297	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	44.8778864404065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021995	True	NA	0	True	ATTAAA	-16	NA	46030623	46005087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
WTC11_00010306	chr10	-	2387	8	FSM	ENSG00000204172.12	ENST00000452145.6	2387	8	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_7	29.4056776414185	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCCCAAGTCACACA	NA	False	NA	NA	False	NA	NA	NA	47523638	47501853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_47503544_47504188_47504241_47507547_47507584_47510170_47510272_47517822_47517858_47520498_47520568_47522865_47522935_47523303
WTC11_00010315	chr10	-	3482	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	13	0	13	0	multi-exon	FALSE	canonical	3	18	junction_1	3.40587727318528	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-49538281	True	NA	NA	False	AATAAA	-19	NA	49539108	49515197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
WTC11_00010330	chr10	-	820	3	FSM	ENSG00000289527.1	ENST00000689260.1	829	3	13	-4	-8	0	multi-exon	FALSE	canonical	3	65	junction_2	22	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022903	True	NA	-1	True	AATAAA	-22	NA	52039204	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034218_52036950_52037106_52038964
WTC11_00010331	chr10	-	1014	3	FSM	ENSG00000289527.1	ENST00000686732.1	1022	3	12	-4	-9	0	multi-exon	FALSE	canonical	3	66	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022904	True	NA	-1	True	AATAAA	-22	NA	52039205	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034218_52036950_52037299_52038964
WTC11_00010332	chr10	-	675	2	FSM	ENSG00000289527.1	ENST00000689388.1	676	2	1	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022916	True	NA	-1	True	AATAAA	-22	NA	52039217	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034215_52038964
WTC11_00010333	chr10	-	680	2	FSM	ENSG00000289527.1	ENST00000688489.1	678	2	0	-2	0	2	multi-exon	FALSE	canonical	3	255	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTGTTCAC	-52022916	True	NA	1	True	AATAAA	-24	NA	52039217	52033790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034218_52038964
WTC11_00010334	chr10	-	943	3	FSM	ENSG00000289527.1	ENST00000691193.1	938	3	-9	4	-9	0	multi-exon	FALSE	canonical	3	79	junction_1	21.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-52022904	True	NA	-5	True	AATAAA	-18	NA	52039205	52033796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034215_52036950_52037235_52038964
WTC11_00010335	chr10	-	1396	3	NNC	ENSG00000289527.1	novel	1022	3	NA	NA	2	-290	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGACATTCCACCACAA	-52022893	True	NA	NA	False	NA	NA	NA	52039194	52034086	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034355_52036950_52037849_52038964
WTC11_00010336	chr10	-	3683	2	NIC	ENSG00000289527.1	novel	962	3	NA	NA	-9	0	intron_retention	FALSE	canonical	3	122	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022904	True	NA	-1	True	AATAAA	-22	NA	52039205	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52037235_52038964
WTC11_00010343	chr10	-	2172	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	-211	0	0	multi-exon	TRUE	canonical	3	666	junction_3	115.060370627288	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-56347010	True	NA	15	True	AATAAA	-42	NA	56361259	56357226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
WTC11_00010348	chr10	-	830	6	FSM	ENSG00000122952.17	ENST00000460654.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	310.961991246519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCCTTTCTTTGTGCT	-56345482	False	55	NA	False	NA	NA	NA	56359731	56357815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358804_56358948_56359475_56359533_56359686
WTC11_00010349	chr10	-	1464	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	7	-664	0	0	multi-exon	FALSE	canonical	3	206	junction_3	241.670973381165	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-56347010	True	NA	-47	True	NA	NA	NA	56361259	56357478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
WTC11_00010353	chr10	-	3946	6	FSM	ENSG00000165449.12	ENST00000395348.8	3946	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.43117407632541	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTGGTTGCTTTTTCT	-59709147	True	NA	-5	True	AATAAA	-21	NA	59709850	59650763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
WTC11_00010355	chr10	-	4796	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	304	-1289	-197	0	multi-exon	FALSE	canonical	3	72	junction_20	21.2800375939518	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	-60138748	True	NA	-2	True	AATAAA	-22	NA	60140712	60028400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
WTC11_00010369	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	32.4114177412837	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	-62264807	True	NA	NA	False	AATAAA	-12	NA	62268707	62238156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
WTC11_00010373	chr10	-	8758	26	FSM	ENSG00000171988.20	ENST00000399262.7	8758	26	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_25	98.649164213388	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTTCCAGAGTACT	-63465245	True	NA	-9	True	ATTAAA	-17	NA	63465977	63167224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63465494
WTC11_00010403	chr10	-	2625	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	-5	0	3	multi-exon	FALSE	canonical	3	38	junction_3	53.597263611743	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTCTCTGAGCTCTGT	-70144415	True	NA	-1	True	AATAAA	-17	NA	70146676	70137977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
WTC11_00010407	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	183.89815282445	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154894	True	NA	-17	True	ATTAAA	-14	NA	70170523	70147288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
WTC11_00010415	chr10	-	3092	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	0	3	0	0	multi-exon	FALSE	canonical	2	6	junction_4	41.583500333666	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379206	True	NA	-9	True	AATAAA	-16	NA	70382589	70298975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
WTC11_00010416	chr10	-	3079	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	-5	0	0	multi-exon	FALSE	canonical	3	89	junction_2	12.5299640861417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379242	True	NA	-3	True	AATAAA	-22	NA	70382625	70298969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
WTC11_00010417	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	37.0944739819828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379267	True	NA	-3	True	AATAAA	-22	NA	70382650	70298969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
WTC11_00010418	chr10	-	3643	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-871	1270	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGCTCAGTGTTTGCT	-70442250	True	NA	22	True	AATAAA	-45	NA	70442552	70430665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70433089_70435285_70435984_70442030
WTC11_00010419	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	106.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-70436508	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70433089_70435285_70435984_70441474
WTC11_00010422	chr10	-	1139	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	15	-422	15	0	multi-exon	FALSE	canonical	0	0	junction_3	165.984604373083	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	-70888217	False	3951	-13	True	AATAAA	-18	NA	70888239	70883509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
WTC11_00010427	chr10	-	576	3	FSM	ENSG00000197746.15	ENST00000493143.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_1	161.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGCTCTGGCACGCG	-71822110	False	NA	NA	False	NA	NA	NA	71822205	71819750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_71819901_71820239_71820336_71821875
WTC11_00010430	chr10	-	1800	9	FSM	ENSG00000138303.18	ENST00000486689.6	1798	9	0	-2	0	0	multi-exon	FALSE	canonical	2	8	junction_1	62.7514940061191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	-72208830	False	NA	-11	True	ATTAAA	-17	NA	72210737	72096519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731
WTC11_00010432	chr10	-	1276	6	FSM	ENSG00000138303.18	ENST00000672121.1	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	54.7452281025479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATACAGTGACTTGTCTT	NA	False	NA	-11	True	NA	NA	NA	72203523	72096832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72097451_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426
WTC11_00010435	chr10	-	4295	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	60	5	60	-5	multi-exon	FALSE	canonical	3	156	junction_2	12.3337929680854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGGTGGGTCTGCA	-72355075	False	NA	-5	True	AATATA	-15	NA	72355089	72332834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
WTC11_00010436	chr10	-	3133	9	FSM	ENSG00000148719.16	ENST00000394903.6	3198	9	60	5	60	-5	multi-exon	FALSE	canonical	3	60	junction_1	40.3322141718007	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGGTGGGTCTGCA	-72355075	False	NA	-5	True	AATATA	-15	NA	72355089	72332834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
WTC11_00010437	chr10	-	2955	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-46	-5	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGGTGGGTCTGCA	-72352289	True	NA	-5	True	AATATA	-15	NA	72354965	72332834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
WTC11_00010440	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	18	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	-72619671	True	NA	NA	False	NA	NA	NA	72626074	72562710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72563064_72566632_72566795_72626009
WTC11_00010442	chr10	-	2744	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_5	135.323139339938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTCTGTGTGGTGT	-73092893	True	NA	-12	True	TTTAAA	-6	NA	73096866	73007215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
WTC11_00010443	chr10	-	2852	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	-8	0	1	multi-exon	FALSE	canonical	0	0	junction_5	99.9639986215445	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTCTGTGTGGTGT	-73096864	False	NA	-12	True	TTTAAA	-6	NA	73096974	73007215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
WTC11_00010445	chr10	-	632	1	FSM	ENSG00000272599.2	ENST00000621900.1	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATTATTATTTAAAAC	NA	False	NA	-5	True	AATAAA	-17	NA	73125532	73124900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73124900_73125500
WTC11_00010453	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_12	126.357957142925	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-73405624	True	NA	-5	True	TATAAA	-13	NA	73414058	73375100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
WTC11_00010456	chr10	-	843	8	FSM	ENSG00000138279.16	ENST00000492380.1	843	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	307.841066865647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGAATTTGGACGAGAC	-73405642	True	NA	NA	False	NA	NA	NA	73414076	73383260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
WTC11_00010464	chr10	-	2418	12	FSM	ENSG00000107758.16	ENST00000342558.3	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	15.0684389118339	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	-73495937	True	NA	2	True	AATAAA	-29	NA	73495996	73443779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
WTC11_00010465	chr10	-	1141	5	FSM	ENSG00000107758.16	ENST00000495897.2	1144	5	0	3	0	-3	multi-exon	FALSE	canonical	3	67	junction_2	7.51664818918645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTCTGTGTTTCATT	-73471550	False	35	NA	False	AATAAA	-15	NA	73471577	73466960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467
WTC11_00010470	chr10	-	1295	6	FSM	ENSG00000177791.12	ENST00000359322.5	1300	6	0	5	0	-5	multi-exon	FALSE	canonical	3	23	junction_3	6.32455532033676	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGGCTAACAATGCACAGA	-73641162	False	NA	NA	False	AATGAA	-38	NA	73641474	73631616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410
WTC11_00010479	chr10	-	1148	2	Genic_Genomic	ENSG00000288823.1	novel	1388	1	NA	NA	66	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTATTTATTTAT	-73781670	True	NA	0	True	AATAAA	-20	NA	73781945	73780623	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_73781603_73781776
WTC11_00010482	chr10	-	545	2	FSM	ENSG00000166507.19	ENST00000398701.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGCAAGTTGTAATTT	-73810665	True	NA	2	True	ATTAAA	-24	NA	73811798	73810683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73810904_73811473
WTC11_00010484	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	18.3541968827262	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871447	True	NA	0	True	AATAAA	-18	NA	73874519	73812500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
WTC11_00010489	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	106.121639966294	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74150630	False	NA	-15	True	ATTAAA	-10	NA	74150842	74122963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
WTC11_00010494	chr10	-	1094	4	FSM	ENSG00000165644.11	ENST00000460899.5	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	13.8884444373331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	-75235718	False	NA	-7	True	AATAAA	-20	NA	75235730	75233970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75234226_75234609_75234744_75234937_75235179_75235266
WTC11_00010496	chr10	-	1669	4	FSM	ENSG00000165644.11	ENST00000490521.1	562	4	-652	-455	-31	0	multi-exon	FALSE	canonical	3	220	junction_2	19.1543438647449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	-75235976	False	NA	-7	True	AATAAA	-20	NA	75235988	75233970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75234744_75234937_75234993_75235059_75235179_75235266
WTC11_00010498	chr10	-	387	5	FSM	ENSG00000156113.24	ENST00000638531.1	599	5	212	0	212	0	multi-exon	FALSE	canonical	3	9	junction_4	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGCTGGAATTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	77090510	77073235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399
WTC11_00010503	chr10	-	8268	32	FSM	ENSG00000151208.17	ENST00000372391.7	7644	32	-620	-4	-620	4	multi-exon	FALSE	canonical	3	65	junction_29	43.8368225756336	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAAGATGTGAGTTT	NA	False	NA	-7	True	AATAAA	-20	NA	77927375	77790786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77792544_77794007_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805862_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77821081_77822102_77824383_77824477_77828881_77828986_77829354_77829531_77830216_77830345_77830740_77830874_77833913_77834040_77835737_77835923_77841880_77842194_77843446_77843707_77853353_77853538_77854226_77854371_77856729_77856893_77869128_77869198_77926216
WTC11_00010508	chr10	-	1022	8	FSM	ENSG00000148606.14	ENST00000473588.2	1022	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	72.8478985731957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATGCCCCTCTCTCA	-78019220	False	NA	NA	False	NA	NA	NA	78019252	78002196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_78002309_78004715_78004889_78007701_78007867_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161
WTC11_00010509	chr10	-	1850	3	FSM	ENSG00000148606.14	ENST00000484760.1	1859	3	21	-12	21	12	multi-exon	FALSE	canonical	3	198	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACGTGCCTGCTCTTAA	-78015644	False	NA	NA	False	NA	NA	NA	78020152	78013073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_78013791_78017574_78017717_78019161
WTC11_00010518	chr10	-	1742	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	-71	-955	0	636	multi-exon	FALSE	canonical	3	49	junction_1	49.9799959983992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGTCACTATATAATT	-79826348	False	NA	NA	False	NA	NA	NA	79826359	79796752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
WTC11_00010529	chr10	-	4377	3	FSM	ENSG00000062650.20	ENST00000484070.1	3207	3	0	-1170	0	1170	multi-exon	FALSE	canonical	3	550	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACTTCAGTAATCATTA	-86444009	False	NA	NA	False	AATAAA	-13	NA	86444032	86434085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_86437609_86437919_86438016_86443274
WTC11_00010531	chr10	-	6288	19	NNC	ENSG00000062650.20	novel	6310	19	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_16	104.563643564843	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGTTGTCTTTAACA	-86513351	True	NA	NA	False	AATAAA	-15	NA	86521792	86435259	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_86437609_86437919_86438016_86443274_86443364_86446241_86446450_86451966_86452132_86453219_86453336_86453655_86453832_86458988_86459066_86460398_86460497_86461175_86461288_86467278_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497302_86499717_86500744_86517570_86518092_86521364
WTC11_00010540	chr10	-	1922	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	-373	-673	-373	404	multi-exon	FALSE	canonical	3	11	junction_1	97.7723887403801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTCACGCCTGTAAT	-87342937	False	NA	NA	False	TATAAA	-21	NA	87342985	87237993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
WTC11_00010541	chr10	-	536	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	104.658969993021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	-87342345	False	NA	1	True	AATAAA	-18	NA	87342393	87238666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
WTC11_00010542	chr10	-	6418	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	-176	-68	0	68	multi-exon	FALSE	canonical	3	44	junction_1	87.5588944653826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGAAGCTAGTGGGGCT	-87342564	False	NA	NA	False	NA	NA	NA	87342612	87240107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
WTC11_00010544	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	201	junction_2	28.9405520948643	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-87342340	False	NA	NA	False	NA	NA	NA	87342388	87284766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
WTC11_00010545	chr10	-	924	5	FSM	ENSG00000223482.9	ENST00000660454.1	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	105.000892853347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTCCAAAATCAGACAAC	-87342282	False	NA	NA	False	AATAAA	-31	NA	87342330	87307577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87308061_87326629_87326673_87330891_87331097_87336785_87336890_87342241
WTC11_00010546	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	27	junction_3	99.5866456910765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-87342343	False	466	NA	False	AATAAA	-17	NA	87342391	87319255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
WTC11_00010547	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	125.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	-87342506	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87334815_87336785_87336890_87342241
WTC11_00010558	chr10	-	4655	8	FSM	ENSG00000152779.14	ENST00000371790.5	4655	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.0479018190667	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAAGACATTTTTCCC	-89534763	True	NA	-5	True	AATAAA	-20	NA	89535594	89430298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89433327_89436059_89436320_89438603_89439184_89441107_89441252_89443755_89443860_89462378_89462625_89534500_89534641_89535441
WTC11_00010560	chr10	-	7954	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	-72	-5179	-3	5179	multi-exon	FALSE	canonical	3	18	junction_6	69.4686180148194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTATGTGTTGCGTTTTG	-89643949	False	NA	-5	True	NA	NA	NA	89643959	89577808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
WTC11_00010561	chr10	-	3331	7	FSM	ENSG00000152782.18	ENST00000307534.10	3155	7	-176	0	-176	0	multi-exon	FALSE	canonical	3	145	junction_6	27.021082304173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	NA	False	NA	-13	True	AATAAA	-18	NA	89645418	89582987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89644599
WTC11_00010576	chr10	-	6820	25	FSM	ENSG00000119912.18	ENST00000679069.1	6804	25	0	-16	0	0	multi-exon	TRUE	canonical	3	7	junction_11	59.2536772182865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	-92570842	True	NA	-16	True	AATAAA	-6	NA	92574096	92452255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92480917_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
WTC11_00010578	chr10	-	6823	23	FSM	ENSG00000119912.18	ENST00000678977.1	6807	23	0	-16	0	0	multi-exon	FALSE	canonical	3	247	junction_11	20.883828612605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	-92570842	True	NA	-16	True	AATAAA	-6	NA	92574096	92452255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
WTC11_00010586	chr10	-	3504	13	ISM	ENSG00000148690.12	ENST00000359204.5	3109	14	68	1805	68	-9	intron_retention	FALSE	canonical	3	337	junction_7	28.210887378221	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAATGTCAGAGGCT	-93698359	True	NA	-13	True	AATAAA	-11	NA	93702524	93669687	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029
WTC11_00010587	chr10	-	1454	14	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	56	-9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	172.50589562003	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAATGTCAGAGGCT	-93698371	True	NA	-13	True	AATAAA	-11	NA	93702536	93669687	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_93669869_93670769_93670849_93672041_93672090_93676652_93676692_93681479_93681599_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702173
WTC11_00010590	chr10	-	2190	10	FSM	ENSG00000173145.11	ENST00000463649.5	2190	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	18.9678089872757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-94358081	True	NA	47	True	AATAAA	-10	NA	94362939	94346475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94358216_94361664_94361873_94362829
WTC11_00010591	chr10	-	576	3	FSM	ENSG00000173145.11	ENST00000461562.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	116.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTAAGAACATTGCTT	-94358101	True	NA	NA	False	NA	NA	NA	94362959	94361323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_94361562_94361664_94361873_94362829
WTC11_00010596	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	105.588430553099	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	-95270658	True	NA	-4	True	AATAAA	-16	NA	95291003	95237571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
WTC11_00010599	chr10	-	5950	24	NIC	ENSG00000095637.23	novel	5927	25	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_19	19.4856352500094	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	-95557592	True	NA	-6	True	AATAAA	-23	NA	95561428	95311772	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
WTC11_00010600	chr10	-	5858	26	FSM	ENSG00000095637.23	ENST00000306402.10	5858	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	47.3679385238581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	-95557578	True	NA	-6	True	AATAAA	-23	NA	95561414	95311772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95351208_95351377_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95421960_95422074_95422189_95422217_95432447_95432577_95434621_95434718_95437489_95437556_95441125_95441181_95491034_95491121_95561319
WTC11_00010606	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	124.444850569774	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-95689651	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
WTC11_00010623	chr10	-	845	4	FSM	ENSG00000077147.16	ENST00000490192.1	884	4	0	39	0	-39	multi-exon	FALSE	canonical	3	1837	junction_2	85.3476550481747	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCAGGCGCGGTGGCTC	-96552867	False	76	NA	False	NA	NA	NA	96552943	96543639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96544207_96547894_96547990_96551244_96551412_96552927
WTC11_00010628	chr10	-	931	2	Genic_Genomic	ENSG00000181274.7	novel	2233	1	NA	NA	1330	32294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAATGTAGACAAGGGTA	-97333382	False	NA	NA	False	NA	NA	NA	97333399	97300202	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_97300232_97332497
WTC11_00010630	chr10	-	2237	1	FSM	ENSG00000181274.7	ENST00000371019.4	2233	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCATTTTGGTGGAA	-97330697	True	NA	2	True	AATAAA	-23	NA	97334729	97332492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97332500_97334700
WTC11_00010631	chr10	-	4580	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	-184	0	-159	multi-exon	FALSE	canonical	3	211	junction_27	36.1813867290655	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGCGAATGCCCCAGG	-97397701	True	NA	NA	False	NA	NA	NA	97401340	97356516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
WTC11_00010634	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	246.428319530582	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	-97434931	True	NA	33	True	AATAAA	-12	NA	97445993	97436247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
WTC11_00010643	chr10	-	3532	32	FSM	ENSG00000155229.21	ENST00000370782.6	3532	32	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_31	86.7899014443266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97498734	False	NA	-4	True	AATAAA	-16	NA	97498758	97458323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272_97498393_97498695
WTC11_00010644	chr10	-	1515	4	FSM	ENSG00000155229.21	ENST00000485400.1	1513	4	0	-2	0	0	multi-exon	FALSE	canonical	3	435	junction_1	25.1970015852857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97460308	False	NA	-4	True	AATAAA	-16	NA	97460319	97458323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361
WTC11_00010646	chr10	-	3557	30	FSM	ENSG00000155229.21	ENST00000355839.10	3555	30	0	-2	0	0	multi-exon	FALSE	canonical	3	23	junction_24	85.4139531968486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97498585	False	NA	-4	True	AATAAA	-16	NA	97498609	97458323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
WTC11_00010651	chr10	-	877	10	FSM	ENSG00000155229.21	ENST00000422685.5	877	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	137.190864613258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTCATCCTGAGTCTT	-97489779	True	NA	NA	False	NA	NA	NA	97498429	97470830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
WTC11_00010663	chr10	-	1588	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	-8	0	8	multi-exon	FALSE	canonical	3	95	junction_1	90.5989670995546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGTGTGGTGGCTCA	-98443002	True	NA	NA	False	AATAAA	-24	NA	98446913	98429142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
WTC11_00010664	chr10	-	1314	8	NIC	ENSG00000107521.20	novel	2791	19	NA	NA	5	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	114.212119161082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGAGGTGTGGTGGCTC	-98442946	True	NA	NA	False	AATAAA	-23	NA	98446857	98429143	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_98429643_98430570_98430671_98433939_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
WTC11_00010666	chr10	-	750	6	NNC	ENSG00000107521.20	novel	1580	10	NA	NA	10	1215	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	114.913184622131	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGTGTATTCAGAGAGA	-98442992	True	NA	NA	False	AATGAA	-23	NA	98446903	98433870	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446886
WTC11_00010668	chr10	-	1479	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	1	-558	0	558	multi-exon	FALSE	canonical	3	159	junction_1	96.8067949864861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTCTTTTTAATTTTAGC	-98443015	True	NA	73	True	NA	NA	NA	98446926	98441829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
WTC11_00010674	chr10	-	3764	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	-976	0	0	multi-exon	FALSE	canonical	3	43	junction_1	68.1431168570972	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-99729142	True	NA	NA	False	ATTAAA	-18	NA	99732100	99710867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
WTC11_00010679	chr10	-	5402	14	FSM	ENSG00000107554.17	ENST00000636706.1	5437	14	35	0	35	0	multi-exon	FALSE	canonical	3	10	junction_13	30.8629342425371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-99930847	True	NA	-5	True	AATAAA	-16	NA	99930961	99875576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99929607
WTC11_00010680	chr10	-	6420	17	FSM	ENSG00000107554.17	ENST00000324109.9	6428	17	8	0	8	0	multi-exon	FALSE	canonical	3	9	junction_16	41.2696449433479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-100009456	True	NA	-5	True	AATAAA	-16	NA	100009939	99875576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99955213_99957206_99969114_99969238_99971979_99972135_100009837
WTC11_00010693	chr10	-	3107	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	7	-495	0	482	multi-exon	FALSE	canonical	3	595	junction_4	36.6264931436249	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTCTTTGATATATTG	-100277574	True	NA	NA	False	AATAAA	-13	NA	100286673	100272797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
WTC11_00010694	chr10	-	2024	4	FSM	ENSG00000196072.12	ENST00000441611.5	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	36.1201698039567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAACAAAAGAATT	-100277258	False	9099	NA	False	TTTAAA	-11	NA	100286357	100273955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096
WTC11_00010701	chr10	-	686	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	-8	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	411.526047170771	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100502643	True	NA	-21	True	AATAAA	-17	NA	100529879	100523739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
WTC11_00010702	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	1579.51535288518	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	-100529989	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
WTC11_00010709	chr10	-	757	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	-10	0	10	multi-exon	FALSE	canonical	3	50	junction_2	238.890142115576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTTTGAGTCATC	-100976737	True	NA	-2	True	AGTAAA	-28	NA	100987494	100981365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
WTC11_00010710	chr10	-	905	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	-11	0	10	multi-exon	FALSE	canonical	3	18	junction_3	244.263300559048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTTTGAGTCATC	-100976758	True	NA	-2	True	AGTAAA	-28	NA	100987515	100981365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
WTC11_00010711	chr10	-	886	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	-20	0	15	multi-exon	FALSE	canonical	3	28	junction_1	238.302795246347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCATATGTTAAGCAC	-100976726	True	NA	-20	True	AATAAA	-37	NA	100987483	100986253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
WTC11_00010712	chr10	-	1030	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-16	-15	0	15	multi-exon	FALSE	canonical	3	514	junction_1	18.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCATATGTTAAGCAC	-100976756	True	NA	-20	True	AATAAA	-37	NA	100987513	100986253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987089_100987197_100987312
WTC11_00010713	chr10	-	838	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	-14	-26	0	15	multi-exon	FALSE	canonical	3	23	junction_1	240.655124376958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCATATGTTAAGCAC	-100976740	True	NA	-20	True	AATAAA	-37	NA	100987497	100986253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
WTC11_00010719	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_8	21.5928228816892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586397	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
WTC11_00010720	chr10	-	2767	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	14	0	-1	0	multi-exon	FALSE	canonical	3	13	junction_8	25.3475837112732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586431	True	NA	-5	True	AGTAAA	-18	NA	101588243	101578881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
WTC11_00010725	chr10	-	878	7	NNC	ENSG00000107833.10	novel	877	6	NA	NA	0	44143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5304828696121	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAGACAGAAAAG	-101765883	True	NA	NA	False	AAAAAG	-4	NA	101783384	101737181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_101737213_101781325_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
WTC11_00010731	chr10	-	881	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	4	-8	4	8	multi-exon	FALSE	canonical	3	57	junction_5	7.19444229944198	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTCCTGTGCTGG	-101765908	True	NA	2	True	AATAAA	-28	NA	101783409	101781316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
WTC11_00010733	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	174.480562432228	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-101800977	True	NA	-7	True	AATAAA	-13	NA	101818444	101784449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
WTC11_00010746	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	6.04152298679729	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-102053418	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
WTC11_00010781	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5118	junction_3	577.987504670781	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
WTC11_00010782	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	3057.57007278656	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
WTC11_00010783	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	2940.53677072741	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360127	True	NA	-1	True	AATAAA	-17	NA	103396475	103389049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
WTC11_00010794	chr10	-	4384	17	FSM	ENSG00000108039.18	ENST00000488118.6	4384	17	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_15	73.7503972446929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109911960	False	NA	-6	True	AATAAA	-16	NA	109915075	109864765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109907690_109907816_109915010
WTC11_00010795	chr10	-	2245	19	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_16	69.5974536571242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920313	True	NA	-6	True	AATAAA	-16	NA	109923428	109864765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109907690_109907816_109915010_109915100_109923401
WTC11_00010796	chr10	-	2345	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_19	69.1560121509367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920333	True	NA	-6	True	AATAAA	-16	NA	109923448	109864765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
WTC11_00010812	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	44.5224662389675	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	-110918013	True	NA	-32	True	NA	NA	NA	110919201	110900120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
WTC11_00010814	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-110917992	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
WTC11_00010820	chr10	-	3328	5	FSM	ENSG00000023041.12	ENST00000682143.1	2386	5	-934	-8	-172	3	multi-exon	FALSE	canonical	3	241	junction_4	16.2480768092719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112439600	False	NA	-10	True	AATAAA	-26	NA	112439634	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335
WTC11_00010822	chr10	-	3991	10	FSM	ENSG00000023041.12	ENST00000683491.1	3983	10	0	-8	0	3	multi-exon	FALSE	canonical	0	0	junction_5	107.225388554284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443510	True	NA	-10	True	AATAAA	-26	NA	112446940	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112434465_112438335_112438390_112439505_112439627_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
WTC11_00010824	chr10	-	3336	11	FSM	ENSG00000023041.12	ENST00000682616.1	3328	11	0	-8	0	3	multi-exon	FALSE	canonical	0	0	junction_6	96.7334481965778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443511	True	NA	-10	True	AATAAA	-26	NA	112446941	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112439505_112439627_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00010825	chr10	-	3933	9	FSM	ENSG00000023041.12	ENST00000684234.1	3925	9	0	-8	0	3	multi-exon	FALSE	canonical	3	174	junction_7	35.2801289680182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443511	True	NA	-10	True	AATAAA	-26	NA	112446941	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00010827	chr10	-	2046	10	FSM	ENSG00000023041.12	ENST00000682195.1	2038	10	0	-8	0	3	multi-exon	FALSE	canonical	2	7	junction_6	79.4215196138791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443519	True	NA	-10	True	AATAAA	-26	NA	112446949	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00010828	chr10	-	3224	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	-8	0	3	multi-exon	FALSE	canonical	3	174	junction_8	36.5557244170365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443520	True	NA	-10	True	AATAAA	-26	NA	112446950	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00010829	chr10	-	2153	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	-8	0	3	multi-exon	FALSE	canonical	3	22	junction_10	71.3164777593509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443526	True	NA	-10	True	AATAAA	-26	NA	112446956	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
WTC11_00010830	chr10	-	2305	12	FSM	ENSG00000023041.12	ENST00000682055.1	2297	12	0	-8	0	3	multi-exon	FALSE	canonical	0	0	junction_7	94.0339309254338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443532	True	NA	-10	True	AATAAA	-26	NA	112446962	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112441728_112441813_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00010831	chr10	-	2129	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	-8	0	3	multi-exon	FALSE	canonical	2	6	junction_8	75.9276629430934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443532	True	NA	-10	True	AATAAA	-26	NA	112446962	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
WTC11_00010832	chr10	-	2024	11	NIC	ENSG00000023041.12	novel	2170	11	NA	NA	-247	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	76.7635981439119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112447175	False	NA	-13	True	AATAAA	-23	NA	112447209	112430299	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112447145
WTC11_00010837	chr10	-	4709	9	FSM	ENSG00000198924.8	ENST00000361384.7	4450	9	-258	-1	0	1	multi-exon	TRUE	canonical	3	75	junction_7	9.30641579771719	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTTTTGTTTTTT	-113854317	False	NA	NA	False	AATAAA	-18	NA	113854340	113834723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722
WTC11_00010839	chr10	-	7230	17	NNC	ENSG00000165813.20	novel	7228	16	NA	NA	23	18166	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.0993012270719	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	-114171218	True	NA	NA	False	NA	NA	NA	114174179	114102695	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_114102722_114120861_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
WTC11_00010841	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	14.7604570982744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-114171271	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
WTC11_00010842	chr10	-	2033	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	2	0	-2	multi-exon	FALSE	canonical	3	17	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCAGTGCTGCTGCTA	-114171241	True	NA	-7	True	AATAAA	-20	NA	114174202	114161609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114163330_114173140_114173266_114174014
WTC11_00010843	chr10	-	1923	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	5	0	-5	multi-exon	FALSE	canonical	3	52	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACCATCAGTGCTGCTG	-114171259	True	NA	-10	True	AATAAA	-17	NA	114174220	114161612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114163330_114174014
WTC11_00010846	chr10	-	3964	19	FSM	ENSG00000169129.15	ENST00000369271.7	3964	19	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	7.25569167815137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTCAGTTCATGAAA	-114404720	False	NA	0	True	AATAAA	-19	NA	114404756	114294823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114296069_114296977_114297101_114297231_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353_114301466_114302338_114302485_114304718_114304931_114307804_114307910_114308432_114308518_114310353_114310444_114313870_114314051_114315559_114315766_114323170_114323262_114331802_114331898_114333220_114333296_114340602_114340732_114404439
WTC11_00010852	chr10	-	762	4	FSM	ENSG00000151892.16	ENST00000682194.1	956	4	194	0	51	0	multi-exon	FALSE	canonical	1	3	junction_3	7.40870359029762	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGATTTATACTTCC	-116272826	True	NA	NA	False	NA	NA	NA	116272958	116269502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116269587_116270821_116271116_116271989_116272276_116272860
WTC11_00010855	chr10	-	1110	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116668112	True	NA	-4	True	AATAAA	-18	NA	116670264	116663695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
WTC11_00010856	chr10	-	1793	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	-2	0	2	multi-exon	FALSE	canonical	3	77	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTTTAGAATATATG	-116668112	True	NA	62	True	AATAAA	-25	NA	116670264	116664283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116665827_116668257_116668324_116670080
WTC11_00010859	chr10	-	525	3	FSM	ENSG00000165868.16	ENST00000674326.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTTTGTTTTATGAAA	-116849410	True	NA	NA	False	AAAAAG	-14	NA	116849720	116833091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116833374_116834934_116835023_116849565
WTC11_00010862	chr10	-	9496	6	NNC	ENSG00000165650.12	novel	9672	5	NA	NA	0	-150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.5350414516117	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATCGACCATAACCATG	-117371194	True	NA	29	True	NA	NA	NA	117375440	117277423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_117281352_117281377_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
WTC11_00010863	chr10	-	6509	6	NNC	ENSG00000165650.12	novel	9672	5	NA	NA	0	-3136	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.5350414516117	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAGCATAACAAAGTC	-117371194	True	NA	NA	False	NA	NA	NA	117375440	117280409	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_117281352_117281378_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
WTC11_00010865	chr10	-	6399	5	FSM	ENSG00000107560.12	ENST00000355624.8	6399	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.8397416943394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTGTCAACATTTATT	-118046376	True	NA	0	True	ATTAAA	-15	NA	118046941	118004915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118009226_118015064_118015111_118038971_118039441_118040122_118040566_118045810
WTC11_00010866	chr10	-	6078	6	FSM	ENSG00000107560.12	ENST00000369199.5	6078	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	29.4414673547362	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTATAGTTGATTAAAGT	-118046027	False	NA	-32	True	AATATA	-9	NA	118046592	118004947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118009226_118015064_118015111_118033981_118034042_118038971_118039441_118040122_118040566_118045810
WTC11_00010867	chr10	-	273	3	FSM	ENSG00000107560.12	ENST00000476207.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAACTGTTGTCTAATA	NA	False	NA	NA	False	NA	NA	NA	118015110	118005755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118005839_118009081_118009226_118015064
WTC11_00010869	chr10	-	13739	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	159	0	-159	multi-exon	FALSE	canonical	3	195	junction_8	50.0010937380374	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAATACGCAGATAACTA	-118337965	True	NA	NA	False	GATAAA	-30	NA	118342324	118298083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
WTC11_00010870	chr10	-	775	2	FSM	ENSG00000165669.14	ENST00000467890.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGTTCAAGTGATTCT	NA	False	NA	NA	False	NA	NA	NA	118311486	118310413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206
WTC11_00010880	chr10	-	602	1	FSM	ENSG00000236058.3	ENST00000420302.1	549	1	-16	-37	-16	37	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGCCAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	118872618	118872016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118872000_118872600
WTC11_00010884	chr10	-	1483	13	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_10	65.7526932274768	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	-119165799	False	NA	-10	True	AATAAA	-32	NA	119165814	119140912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119162339_119162415_119164130_119164197_119165536
WTC11_00010891	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	71.6710806507959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	-119596472	False	65	-4	True	AATAAA	-19	NA	119596495	119571801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
WTC11_00010892	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	60.8408029679517	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-119589802	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
WTC11_00010893	chr10	-	1939	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	90.3469777518257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589786	True	NA	-20	True	AATAAA	-28	NA	119596948	119575398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
WTC11_00010894	chr10	-	2304	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	87.4256827253868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589786	True	NA	-20	True	AATAAA	-28	NA	119596948	119575398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
WTC11_00010895	chr10	-	1988	13	NIC	ENSG00000151923.18	novel	5072	12	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	95.4553415070221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGATATAATAGGAAA	-119589786	True	NA	-22	True	AATAAA	-26	NA	119596948	119575400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119593451_119593514_119596433
WTC11_00010900	chr10	-	4235	16	FSM	ENSG00000197771.13	ENST00000369077.4	4216	16	0	-19	0	-17	multi-exon	FALSE	canonical	1	150	junction_11	126.795828883375	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTATCACCTAATGT	-119866700	True	NA	19	True	TTTAAA	-3	NA	119872843	119829420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843253_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
WTC11_00010903	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120355183	120354700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_120354700_120355200
WTC11_00010906	chr10	-	4592	18	NIC	ENSG00000066468.24	novel	3061	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	160.014013227173	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGACAAAATAAATGTCAC	-121593399	True	NA	-38	True	AATAAA	-27	NA	121598452	121478368	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
WTC11_00010907	chr10	-	4589	18	NIC	ENSG00000066468.24	novel	4624	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	160	junction_9	104.488604699798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGACAAAATAAATGTCAC	-121593399	True	NA	-38	True	AATAAA	-27	NA	121598452	121478368	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
WTC11_00010909	chr10	-	6190	14	FSM	ENSG00000066468.24	ENST00000683418.1	6317	14	127	0	127	0	multi-exon	FALSE	canonical	3	160	junction_9	113.005419569466	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTTTTAATACTC	NA	False	NA	-16	True	AATAAA	-9	NA	121554133	121478346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289
WTC11_00010910	chr10	-	6767	17	FSM	ENSG00000066468.24	ENST00000683211.1	6964	17	197	0	-26	0	multi-exon	FALSE	canonical	3	160	junction_9	107.688769580444	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTTTTAATACTC	-121596593	False	5053	-16	True	AATAAA	-9	NA	121596614	121478346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708
WTC11_00010917	chr10	-	2527	8	NIC	ENSG00000066468.24	novel	1478	9	NA	NA	-1	833	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	196.933532763038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTCAATAATACCATT	-121593380	True	NA	NA	False	ATTAAA	-7	NA	121598433	121516378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121517464_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
WTC11_00010923	chr10	-	4845	12	FSM	ENSG00000107669.19	ENST00000224652.12	4895	12	52	-2	-15	2	multi-exon	FALSE	canonical	3	96	junction_5	45.9917347946507	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTGGTGGTCATTACT	-121924475	True	NA	-3	True	AATAAA	-19	NA	121927979	121740421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
WTC11_00010924	chr10	-	4897	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	-2	0	2	multi-exon	FALSE	canonical	3	84	junction_5	46.3136985964839	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTGGTGGTCATTACT	-121924527	True	NA	-3	True	AATAAA	-19	NA	121928031	121740421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
WTC11_00010925	chr10	-	4834	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	314	-10	6	2	multi-exon	FALSE	canonical	3	18	junction_11	61.6728237563568	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTGGTGGTCATTACT	-121928179	True	NA	-3	True	AATAAA	-19	NA	121928471	121740421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
WTC11_00010928	chr10	-	1395	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	-4	0	4	multi-exon	FALSE	canonical	3	700	junction_5	37.6143589603758	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGCTCTTTATTTTC	-121965905	True	NA	NA	False	ATTAAA	-30	NA	121975217	121957086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
WTC11_00010934	chr10	-	730	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_1	10.3387082795139	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGATTGTTGATTATA	-122879165	True	NA	NA	False	AATAAA	-38	NA	122879581	122849075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
WTC11_00010935	chr10	-	2914	6	FSM	ENSG00000119965.13	ENST00000481909.2	2913	6	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_1	13.1362094989384	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTCACGTATTGGCT	-122952787	True	NA	0	True	AATAAA	-24	NA	122954227	122930899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
WTC11_00010936	chr10	-	675	4	FSM	ENSG00000119965.13	ENST00000470158.1	675	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	36.3532055746884	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGGAAAAGAAACTTATG	-122950567	False	NA	NA	False	NA	NA	NA	122952007	122932602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122932662_122937704_122938160_122948648_122948756_122951953
WTC11_00010938	chr10	-	4533	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_3	7.54983443527075	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTTCTTTTTTGGA	-123007685	True	NA	0	True	AATAAA	-22	NA	123008795	122990805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
WTC11_00010939	chr10	-	4497	5	NIC	ENSG00000095574.12	novel	4532	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	28.7260770033083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	-123007663	True	NA	-1	True	AATAAA	-21	NA	123008773	122990806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_122994724_122995993_122996177_122998492_122998659_123007025_123007177_123008693
WTC11_00010943	chr10	-	3586	14	FSM	ENSG00000121898.13	ENST00000241305.4	3544	14	-39	-3	-39	3	multi-exon	TRUE	canonical	2	10	junction_2	3.89355407225962	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTGTGACTTTTCT	-123891314	True	NA	0	True	AATAAA	-19	NA	123891846	123745635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_123747018_123754662_123754763_123757212_123757353_123761871_123762170_123766972_123767153_123768525_123768723_123770915_123771040_123780166_123780256_123797975_123798127_123799114_123799200_123842348_123842489_123862613_123862724_123880210_123880310_123891355
WTC11_00010944	chr10	-	4776	8	FSM	ENSG00000182022.18	ENST00000346248.7	4810	8	25	9	-15	-9	multi-exon	FALSE	canonical	3	13	junction_7	9.79379228628721	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCAAGCTCTTCCTGG	-124092390	False	393	-7	True	NA	NA	NA	124092429	124007676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
WTC11_00010945	chr10	-	4885	8	FSM	ENSG00000182022.18	ENST00000435907.6	4809	8	-10	-66	-10	66	multi-exon	FALSE	canonical	3	22	junction_1	6.60859057498307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAAAGAGGAGTTACAG	-124093569	False	NA	68	True	NA	NA	NA	124093608	124007601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124093468
WTC11_00010952	chr10	-	5753	5	FSM	ENSG00000189319.14	ENST00000337318.8	5759	5	11	-5	11	5	multi-exon	FALSE	canonical	3	19	junction_4	9.98436277385793	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCAGCTGTGTGGTTT	-124744047	True	NA	1	True	AATAAA	-27	NA	124744367	124619286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124623605_124681606_124682380_124696157_124696213_124706635_124706888_124744012
WTC11_00010954	chr10	-	5196	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	19	-1616	0	36	multi-exon	FALSE	canonical	3	168	junction_1	119.611523971007	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGAAGAGATGAGAAAAGA	-124788583	True	NA	NA	False	AAGAAA	-15	NA	124791868	124756217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
WTC11_00010956	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	147.614904396541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-124788583	True	NA	-22	True	ATTAAA	-15	NA	124791868	124760145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
WTC11_00010958	chr10	-	856	2	FSM	ENSG00000203791.15	ENST00000468738.1	430	2	-368	-58	-368	0	multi-exon	FALSE	canonical	3	274	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGACTTTTTCTTGG	-124766148	False	NA	NA	False	NA	NA	NA	124766159	124760415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124760504_124765391
WTC11_00010960	chr10	-	3199	11	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6827	944	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	253.106380796692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACCTGTGATAACAAAAA	-125151852	False	5260	NA	False	NA	NA	NA	125151889	124988190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125151560
WTC11_00010961	chr10	-	3095	10	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6827	944	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	253.013296874021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACCTGTGATAACAAAAA	-125151852	False	5260	NA	False	NA	NA	NA	125151889	124988190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125151560
WTC11_00010962	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_10	202.5755414654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	-125160405	False	NA	-2	True	AATAAA	-22	NA	125160513	124984316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
WTC11_00010963	chr10	-	3129	11	FSM	ENSG00000175029.17	ENST00000494626.6	2014	11	-81	-1034	-67	944	multi-exon	FALSE	canonical	3	16	junction_10	306.463064658696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACCTGTGATAACAAAAA	-125160472	False	NA	NA	False	NA	NA	NA	125160580	124988190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125133511_125133613_125160318
WTC11_00010965	chr10	-	3024	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	-67	940	combination_of_known_junctions	FALSE	canonical	3	173	junction_9	207.959932038201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTACCTGTGATAACA	-125160472	False	NA	NA	False	NA	NA	NA	125160580	124988194	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
WTC11_00010966	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	240.290261974971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125158445	True	NA	-27	True	AATAAA	-18	NA	125161026	124989224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
WTC11_00010972	chr10	-	1189	10	FSM	ENSG00000188690.15	ENST00000650587.1	1172	10	0	-17	0	8	multi-exon	TRUE	canonical	0	0	junction_4	140.294927444533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTGTCATTTTAAGT	-125810073	False	NA	4	True	AATAAA	-36	NA	125816510	125788568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436
WTC11_00010975	chr10	-	1425	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	135.55401137554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACTGACTACCTGTGC	-125816848	True	NA	-32	True	NA	NA	NA	125823285	125788604	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
WTC11_00010979	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	118.365253910653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	-125816759	True	NA	-1	True	AATAAA	-20	NA	125823196	125802056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
WTC11_00010984	chr10	-	10395	15	NNC	ENSG00000148773.14	novel	12716	15	NA	NA	32	14463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2359536958297	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAAATCAGAG	-128121364	True	NA	NA	False	NA	NA	NA	128126391	128082195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_128082224_128097895_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
WTC11_00010985	chr10	-	12716	15	FSM	ENSG00000148773.14	ENST00000368654.8	12716	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	42.9316019847803	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTATTTTTATTATA	-128121396	True	NA	0	True	AATAAA	-25	NA	128126423	128096658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
WTC11_00010989	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.18241233033047	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-130110608	True	NA	-4	True	ATTAAA	-23	NA	130110830	130063895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
WTC11_00010990	chr10	-	687	6	FSM	ENSG00000237489.5	ENST00000456581.1	2843	6	44	2112	29	-2112	multi-exon	FALSE	canonical	1	2	junction_3	6.67532770731145	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCCACCATGCCTGG	-130110757	False	NA	NA	False	NA	NA	NA	130110773	130068485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_130068609_130079565_130079629_130079736_130079902_130101093_130101212_130104082_130104231_130110703
WTC11_00010992	chr10	-	2868	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-83	-1243	-39	1243	multi-exon	FALSE	canonical	3	2425	junction_1	204.269821559622	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTTTATCTTTGAG	-131981983	False	NA	NA	False	ATTAAA	-31	NA	131982006	131966440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
WTC11_00010994	chr10	-	752	2	FSM	ENSG00000176171.12	ENST00000631806.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	2480	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGACCGTGAAGGCGG	-131976901	True	NA	NA	False	NA	NA	NA	131981965	131973396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_131973944_131981760
WTC11_00010996	chr10	-	1271	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	-278	-260	-262	260	multi-exon	FALSE	canonical	3	19	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAACCCAGCCTCAGGT	-132332092	False	NA	NA	False	AGTAAA	-17	NA	132332109	132323776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132324374_132331435
WTC11_00010997	chr10	-	1533	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	-195	-731	-185	731	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTTTCTTTTTTGTG	-132332015	False	NA	NA	False	AATAAA	-18	NA	132332032	132329549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132330486_132331435
WTC11_00011006	chr10	-	4200	17	FSM	ENSG00000130640.15	ENST00000682332.1	4200	17	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_16	34.7130536506082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	-133308945	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
WTC11_00011009	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	57.3955573193605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
WTC11_00011012	chr10	-	1312	9	NNC	ENSG00000127884.5	novel	1277	8	NA	NA	0	46979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.208113129824	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAACAT	-133356964	True	NA	NA	False	AAAAAG	-3	NA	133373354	133315505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_133315541_133362484_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
WTC11_00011013	chr10	-	1314	9	NNC	ENSG00000127884.5	novel	1277	8	NA	NA	0	46979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.208113129824	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAACAT	-133356964	True	NA	NA	False	AAAAAG	-3	NA	133373354	133315505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_133315541_133362482_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
WTC11_00011015	chr10	-	1307	9	NNC	ENSG00000127884.5	novel	1277	8	NA	NA	0	18554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.208113129824	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGGCAGCTGGAGGCC	-133356964	True	NA	NA	False	AAAAAG	-1	NA	133373354	133343930	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_133343956_133362479_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
WTC11_00011019	chr10	-	783	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	-21	0	19	multi-exon	FALSE	canonical	3	62	junction_1	79.0797066256571	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTTTGGTGCTGAG	-133355065	True	NA	-3	True	NA	NA	NA	133358025	133355138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
WTC11_00011023	chr10	+	704	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCACTGAATACTAAG	NA	False	NA	NA	False	NA	NA	NA	6630154	6630858	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_6630200_6630900
WTC11_00011044	chr10	+	356	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCTTCTCAGAATTC	NA	False	NA	NA	False	AAAAAG	-21	NA	76822199	76822555	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_76822200_76822600
WTC11_00011054	chr10	+	2859	2	NNC	ENSG00000015171.20	novel	3622	13	NA	NA	6	-84310	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTTCTTCAATTTTT	134478	True	NA	17	True	AATAAA	-14	NA	135524	153341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_135560_150517
WTC11_00011055	chr10	+	4706	14	NNC	ENSG00000047056.17	novel	4933	16	NA	NA	-20	85	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	13.8444443389128	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTTCTCATTGCAGTAA	1055809	True	NA	-4	True	AATAAA	-8	NA	1056826	1132469	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_1056880_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103598_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
WTC11_00011056	chr10	+	1674	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	0	-61	0	61	multi-exon	FALSE	canonical	1	3	junction_9	2.72618758808562	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGTATAGTCAAGTGAT	4825820	True	NA	NA	False	NA	NA	NA	4826206	4848123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
WTC11_00011058	chr10	+	1321	10	NIC	ENSG00000196139.14	novel	1405	9	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.9066812686365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5035321	True	NA	14	True	AATAAA	-21	NA	5035474	5107686	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5035617_5077869_5077978_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
WTC11_00011061	chr10	+	4357	15	NIC	ENSG00000108021.20	novel	8626	21	NA	NA	0	-2335	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	22.3857644269655	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCGTTGTGCCTCTGC	5678637	True	NA	NA	False	NA	NA	NA	5684837	5737478	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5685176_5709529_5709664_5712393_5712540_5712822_5712919_5714134_5714208_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303
WTC11_00011062	chr10	+	8519	21	NIC	ENSG00000108021.20	novel	8626	21	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4671968399386	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTGCAATGATTTT	5678647	True	NA	5	True	AATAAA	-16	NA	5684847	5763740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5685176_5712393_5712540_5712822_5712919_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
WTC11_00011063	chr10	+	8606	23	NNC	ENSG00000108021.20	novel	8626	21	NA	NA	104	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	53.9954084365644	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTGCAATGATTTT	5685058	False	NA	5	True	AATAAA	-16	NA	5685068	5763740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_5685176_5712822_5712919_5714134_5714208_5717658_5717751_5720259_5720398_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
WTC11_00011064	chr10	+	2426	12	NIC	ENSG00000134453.16	novel	3275	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	257.442603729212	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAAGTGCTTCAATGA	6079085	True	NA	99	True	NA	NA	NA	6088976	6115834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
WTC11_00011069	chr10	+	2656	4	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62964	2195	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_3	13.2748718344933	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTTCTTTCCTCT	6799993	True	NA	15	True	AATAAA	-24	NA	6800381	6842907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390
WTC11_00011070	chr10	+	1781	1	FSM	ENSG00000278982.1	ENST00000623134.1	1869	1	80	8	80	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCTGATCCCAAACAGT	7411649	False	NA	NA	False	AATAAA	-15	NA	7411678	7413459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_7411700_7413500
WTC11_00011073	chr10	+	522	1	FSM	ENSG00000271360.1	ENST00000604634.1	923	1	34	367	34	-367	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTGCCCGGAGCCCCT	NA	False	NA	NA	False	NA	NA	NA	11611338	11611860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_11611300_11611900
WTC11_00011074	chr10	+	1434	14	NIC	ENSG00000151465.14	novel	1321	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	744.556744353397	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTTGCTTTTCTACCG	12195326	True	NA	29	True	AATAAA	-14	NA	12195964	12250585	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_12196024_12196129_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
WTC11_00011077	chr10	+	7964	12	NNC	ENSG00000183049.14	novel	8088	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.6948663053474	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCATTTCCTCTGTCAT	12349597	False	NA	7	True	AATAAA	-20	NA	12349651	12835546	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_12349911_12553224_12553357_12666735_12666811_12760947_12761087_12769672_12769800_12791157_12791234_12814194_12814308_12816249_12816329_12824464_12824553_12825572_12825695_12828768_12830826_12830849
WTC11_00011079	chr10	+	3663	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	-104	-80	-100	80	multi-exon	TRUE	canonical	3	22	junction_2	55.6627967207498	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATGCCAAGAGAACACAT	13096095	True	NA	103	True	NA	NA	NA	13100058	13138388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
WTC11_00011080	chr10	+	3589	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	-101	0	-87	0	multi-exon	FALSE	canonical	2	6	junction_3	71.3700839910455	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096108	True	NA	6	True	ATTAAA	-2	NA	13100071	13138291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
WTC11_00011081	chr10	+	2160	15	NIC	ENSG00000123240.17	novel	3488	16	NA	NA	-81	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	63.7389846425663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGCTTTTGTGTTAT	13096114	True	NA	8	True	NA	NA	NA	13100077	13136922	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
WTC11_00011083	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	233.128004895737	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	14831844	True	NA	17	True	ATTAAA	-14	NA	14838301	14844737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
WTC11_00011086	chr10	+	740	7	FSM	ENSG00000136738.15	ENST00000445846.1	740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.023196066839	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	17641590	True	NA	NA	False	NA	NA	NA	17644207	17693281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_17644380_17660463_17660549_17672974_17673079_17684674_17684751_17684831_17684928_17688026_17688174_17693221
WTC11_00011088	chr10	+	5028	24	NIC	ENSG00000078403.17	novel	4955	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.8358465192411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCCGTGCCATTCTCA	21523984	True	NA	7	True	AATAAA	-15	NA	21524645	21743626	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21524776_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21688490_21688539_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
WTC11_00011090	chr10	+	5079	23	NIC	ENSG00000078403.17	novel	5143	23	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	31.3174891069981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21533719	False	NA	11	True	AATAAA	-19	NA	21534269	21743630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
WTC11_00011091	chr10	+	5202	25	NNC	ENSG00000078403.17	novel	5067	24	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	38.0473936908518	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21533724	False	NA	11	True	AATAAA	-19	NA	21534274	21743630	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21688490_21688539_21690907_21690962_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
WTC11_00011101	chr10	+	5420	6	FSM	ENSG00000099246.18	ENST00000465772.5	985	6	-143	-4292	0	0	multi-exon	FALSE	canonical	3	4	junction_5	239.087097100617	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGCAGTGGTGTGATCA	27500002	True	NA	NA	False	NA	NA	NA	27504233	27542781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27537875
WTC11_00011102	chr10	+	5387	14	FSM	ENSG00000095787.24	ENST00000679398.1	5486	14	0	99	0	-99	multi-exon	FALSE	canonical	3	23	junction_1	111.709523996297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCAGTTATTTCAGAAC	28533469	False	NA	4	True	AATAAA	-16	NA	28533505	28623013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533583_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
WTC11_00011104	chr10	+	1354	2	ISM	ENSG00000107968.10	ENST00000415139.5	1026	4	-96	10583	24	454	5prime_fragment	FALSE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTTGAAGGCTGAATT	30433536	True	NA	NA	False	AATAAA	-15	NA	30434044	30439935	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_30434379_30438915
WTC11_00011106	chr10	+	2366	6	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	50.30467175124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATGCTGTGTCCCCTC	35125490	False	NA	4	True	AATAAA	-33	NA	35127116	35212955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211253
WTC11_00011119	chr10	+	1172	9	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	12	4548	12	0	5prime_fragment	FALSE	canonical	3	92	junction_5	4.26468052730799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGTATTTTGTTGTC	44958551	True	NA	3	True	AGTAAA	-14	NA	44959813	44991343	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947
WTC11_00011120	chr10	+	2497	11	NIC	ENSG00000107551.21	novel	3631	11	NA	NA	-8	-10	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	29.6615913261578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTATTGAACTGAAGAA	44958560	True	NA	1	True	AATAAA	-5	NA	44959822	44994697	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44983940_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
WTC11_00011126	chr10	+	4122	29	NIC	ENSG00000172661.20	novel	4623	30	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	67.1730460247628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTTTGTTTTTA	45724400	True	NA	4	True	AATAAA	-13	NA	45727272	45792601	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45787034_45787248_45788870_45789492_45790355_45790534_45792260
WTC11_00011136	chr10	+	3057	13	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	10	-13	combination_of_known_junctions	FALSE	canonical	2	4	junction_12	21.9334536470864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTCTGAAATACGTTG	48302259	True	NA	32	True	AGTAAA	-17	NA	48306689	48436427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48308094_48308289_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
WTC11_00011139	chr10	+	5337	2	FSM	ENSG00000107643.17	ENST00000459755.1	2372	2	515	-3480	515	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	48430395	False	NA	19	True	AATAAA	-28	NA	48430407	48439357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_48431271_48434883
WTC11_00011141	chr10	+	3043	15	NIC	ENSG00000178440.8	novel	3519	18	NA	NA	13	21	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	35.0417389606702	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGTACACATGGCAC	49938141	True	NA	12	True	AATAAA	-18	NA	49942069	50010497	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973143_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
WTC11_00011142	chr10	+	2408	6	NIC	ENSG00000204152.14	novel	2495	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	39.422836021778	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938152	True	NA	NA	False	ATTAAA	-19	NA	49942080	49974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_49942301_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
WTC11_00011143	chr10	+	2763	7	FSM	ENSG00000204149.15	ENST00000618171.5	2763	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	13.3759734848222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCCCAAGTCACACA	NA	False	NA	-78	True	NA	NA	NA	49988603	50010407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
WTC11_00011149	chr10	+	6615	18	FSM	ENSG00000185532.20	ENST00000373980.11	6615	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.70386143235054	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTTGATGTTTAATTCC	51073464	True	NA	15	True	AATAAA	-19	NA	51074486	52298350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_51074902_51153163_51153331_51467722_51467837_51804584_51804691_51907506_51907571_52054483_52054562_52062536_52062632_52133839_52133906_52161888_52161964_52251569_52251667_52271349_52271490_52272391_52272482_52280788_52280931_52282152_52282317_52288725_52288849_52288930_52288994_52290223_52290291_52293801
WTC11_00011156	chr10	+	2006	8	NIC	ENSG00000170312.17	novel	1948	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	593.59382801126	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763018	True	NA	NA	False	ATTAAA	-7	NA	60778453	60794843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791889_60792054_60792147_60792290_60793876
WTC11_00011157	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	479.76775844237	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	60763042	True	NA	NA	False	ATTAAA	-16	NA	60778477	60794852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
WTC11_00011164	chr10	+	3796	9	NIC	ENSG00000096717.12	novel	3587	8	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	108.08301207868	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACATTGTTTAAGGTATA	67885132	True	NA	44	True	ATTAAA	-27	NA	67885210	67918386	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_67885400_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
WTC11_00011166	chr10	+	7524	12	NNC	ENSG00000138336.9	novel	9612	12	NA	NA	40158	-8	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	40.5831459541666	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAAACTGGTCATCTAA	68600166	False	NA	4	True	AATAAA	-24	NA	68600494	68694479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68600770_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68673400_68673488_68681398_68681489_68682835_68682974_68686355_68686708_68690807
WTC11_00011171	chr10	+	4304	25	NNC	ENSG00000060339.14	novel	869	7	NA	NA	285	-439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	141.277203624254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGTGCCTGTAATCCCA	68719513	False	NA	NA	False	TATAAA	-18	NA	68721539	68791936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68721671_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
WTC11_00011172	chr10	+	3205	14	Fusion	ENSG00000283551.1_ENSG00000060339.14	novel	869	7	NA	NA	0	-13	multi-exon	FALSE	canonical	0	0	junction_3	186.980649569974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTAAATTAACCTGT	68755144	False	NA	4	True	ATTAAA	-4	NA	68755171	68792362	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_+_68755286_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
WTC11_00011173	chr10	+	3623	4	FSM	ENSG00000165730.16	ENST00000642869.1	3630	4	0	7	0	-7	multi-exon	FALSE	canonical	1	3	junction_1	6.97614984548545	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTACTTCCTGTAGTGA	68827433	False	NA	-4	True	AATATA	-9	NA	68827623	68893053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68828270_68881957_68882111_68884259_68886619_68892588
WTC11_00011176	chr10	+	666	2	FSM	ENSG00000156502.14	ENST00000497254.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATATGCATTTACTC	69207764	False	NA	11	True	AATAAA	-20	NA	69207775	69209099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69207942_69208599
WTC11_00011180	chr10	+	2065	3	FSM	ENSG00000099284.15	ENST00000678214.1	2554	3	489	0	489	0	multi-exon	FALSE	canonical	3	329	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAATAAAAGATCCA	NA	False	NA	-7	True	AAAAAG	-10	NA	70099135	70112245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70100298_70109032_70109208_70111517
WTC11_00011182	chr10	+	226	1	FSM	ENSG00000224725.3	ENST00000430943.1	1201	1	-63	1038	-63	-1038	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAGCCTTAAAAACT	NA	False	NA	NA	False	NA	NA	NA	70389362	70389588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70389400_70389600
WTC11_00011186	chr10	+	702	4	FSM	ENSG00000107736.22	ENST00000470494.5	704	4	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_3	5.09901951359278	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATTGCTTTCTCCTCC	NA	False	NA	NA	False	AATAAA	-14	NA	71617284	71647902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71617394_71645830_71645981_71646458_71646618_71647618
WTC11_00011188	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	72208279	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72216073_72230365_72230441_72233000
WTC11_00011189	chr10	+	1828	3	FSM	ENSG00000166295.9	ENST00000470481.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72223103	False	NA	20	True	AATAAA	-21	NA	72223132	72233829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72224057_72230365_72230441_72233000
WTC11_00011191	chr10	+	365	3	FSM	ENSG00000166321.14	ENST00000469925.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATATTTTTACT	73110238	True	NA	NA	False	AATAAA	-13	NA	73110519	73115168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73110568_73114356_73114449_73114943
WTC11_00011193	chr10	+	1901	12	NNC	ENSG00000138286.15	novel	5455	14	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	15.0898137609065	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATAAATACATTTTGT	73167654	True	NA	16	True	AATAAA	-24	NA	73168148	73235452	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73168387_73174686_73174792_73177845_73177974_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228161_73230421_73230526_73232938_73233164_73234816_73234941_73235192
WTC11_00011194	chr10	+	781	1	FSM	ENSG00000268584.1	ENST00000595595.1	795	1	93	-79	93	79	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACATTGTGAAACCC	73625773	True	NA	NA	False	NA	NA	NA	73626088	73626869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73626100_73626900
WTC11_00011196	chr10	+	880	3	FSM	ENSG00000250959.3	ENST00000686626.1	897	3	1	16	1	-16	multi-exon	FALSE	canonical	2	6	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTGCTGCTCACTCT	73730277	True	NA	-8	True	NA	NA	NA	73730585	73737771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73730874_73731187_73731256_73737247
WTC11_00011203	chr10	+	2479	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	-3	-1227	-3	0	multi-exon	FALSE	canonical	2	29	junction_6	136.114965931808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	74149651	True	NA	NA	False	NA	NA	NA	74151198	74709926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
WTC11_00011208	chr10	+	572	6	NNC	ENSG00000138326.21	novel	583	7	NA	NA	0	5880	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5354.11421618927	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTGAGATCCTGTTGC	77943646	True	NA	NA	False	AGTAAA	-26	NA	78033835	78062693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614_78040701_78062663
WTC11_00011209	chr10	+	1127	3	FSM	ENSG00000138326.21	ENST00000466129.6	1104	3	-23	0	0	0	multi-exon	FALSE	canonical	3	10554	junction_1	1514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTAATCCGCC	77943673	True	NA	NA	False	NA	NA	NA	78033862	78036529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510
WTC11_00011213	chr10	+	3318	6	FSM	ENSG00000138326.21	ENST00000645698.1	3307	6	-11	0	0	0	multi-exon	FALSE	canonical	2	69	junction_4	5477.8888415155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943673	True	NA	33	True	AATAAA	-32	NA	78033862	78040716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78040226_78040614
WTC11_00011214	chr10	+	2706	5	FSM	ENSG00000138326.21	ENST00000440692.6	2712	5	0	6	0	-6	multi-exon	FALSE	canonical	1	2	junction_4	5736.06085981486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAGTTTGAGTTGGTTT	77943673	True	NA	3	True	AATAAA	-16	NA	78033862	78056807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78054530
WTC11_00011257	chr10	+	8270	2	FSM	ENSG00000177853.15	ENST00000534948.2	8270	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGGGCTGAATTTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	96155342	96163761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96156048_96156196
WTC11_00011264	chr10	+	3008	12	NIC	ENSG00000155256.18	novel	2997	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	23.2215346052212	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734216	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
WTC11_00011266	chr10	+	2745	10	NIC	ENSG00000155256.18	novel	2997	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	36.9577670214243	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734259	True	NA	14	True	AATAAA	-16	NA	97737182	97760895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
WTC11_00011267	chr10	+	3224	8	NIC	ENSG00000166024.14	novel	3372	9	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	38.3570763500354	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATCACTGTGGTGTTTG	98133098	True	NA	10	True	ATTAAA	-15	NA	98134672	98244892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_98134707_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
WTC11_00011268	chr10	+	3349	3	FSM	ENSG00000224934.6	ENST00000657109.1	3338	3	-11	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGACTTTTGTTAAT	99430404	True	NA	-41	True	TATAAA	-28	NA	99430918	99438065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99433632_99433739_99433941_99437630
WTC11_00011269	chr10	+	1261	8	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.416096409289	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727680	True	NA	NA	False	AATAAA	-17	NA	99732223	99756134	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99754528_99754635_99755624
WTC11_00011270	chr10	+	1020	3	FSM	ENSG00000235823.4	ENST00000663103.1	1022	3	2	0	2	0	multi-exon	FALSE	canonical	2	9	junction_2	105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100381215_100381449_100388040
WTC11_00011271	chr10	+	1222	4	FSM	ENSG00000235823.4	ENST00000662712.1	1200	4	-22	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	98.3067760748069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373503	False	NA	19	True	AATAAA	-22	NA	100373545	100388360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374084_100380982_100381110_100381215_100381449_100388036
WTC11_00011276	chr10	+	3580	4	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	6	-3	intron_retention	FALSE	canonical	3	268	junction_1	81.7367046613019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAATGTGCTGGATA	100998537	True	NA	NA	False	ATTAAA	-22	NA	100999858	101007833	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100999953_101002496_101002947_101003506_101004167_101005457
WTC11_00011290	chr10	+	2333	8	NIC	ENSG00000138111.14	novel	2852	10	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	51.0929525073504	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAAGTCTGTGCTGTG	102463607	False	NA	15	True	ATTAAA	-15	NA	102465983	102477037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102466088_102468954_102469198_102469992_102470076_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
WTC11_00011298	chr10	+	496	2	FSM	ENSG00000156384.15	ENST00000463224.5	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAAGGTCTTTAGTGGC	104122013	False	NA	NA	False	NA	NA	NA	104122057	104123363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104122155_104122964
WTC11_00011300	chr10	+	770	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	38.1903129078566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTGATAATCATTTG	104274388	True	NA	17	True	AATAAA	-18	NA	104274901	104299417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
WTC11_00011301	chr10	+	6416	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	7	0	-7	multi-exon	FALSE	canonical	3	87	junction_3	21.9829479369806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAAGAATACTCAGAAT	104274968	True	NA	16	True	AATAAA	-16	NA	104275161	104304938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
WTC11_00011330	chr10	+	3862	14	NIC	ENSG00000107679.15	novel	3771	13	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	3	43	junction_13	70.3413486183183	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTCTCATTTTGTTTG	122370604	True	NA	9	True	AATAAA	-21	NA	122374703	122432351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428317_122429623
WTC11_00011335	chr10	+	1557	6	FSM	ENSG00000107902.14	ENST00000368839.1	1522	6	-35	0	-15	0	multi-exon	FALSE	canonical	2	49	junction_5	126.900591015172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458703	True	NA	4	True	AGTAAA	-18	NA	124461807	124614141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124613263
WTC11_00011339	chr10	+	6743	52	NNC	ENSG00000150760.13	novel	6797	52	NA	NA	22	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	29.5026048153061	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGACTCACAGTGTCT	126900772	True	NA	4	True	AATAAA	-9	NA	126905449	127452508	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_126905560_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
WTC11_00011353	chr10	-	2159	5	NNC	ENSG00000261456.6	novel	2438	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	5.76085931090146	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGCCTCCATCTT	-74086	True	NA	NA	False	AATAAA	-15	NA	74182	46891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_48115_48614_48726_48803_48913_49407_49910_73968
WTC11_00011354	chr10	-	5944	19	NNC	ENSG00000107929.16	novel	5963	18	NA	NA	0	19343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.3241810093704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGTAGAAGCTGCCACC	-924634	True	NA	NA	False	AAAAAG	-1	NA	931705	787589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_787617_809542_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
WTC11_00011355	chr10	-	220	1	FSM	ENSG00000205740.2	ENST00000615314.1	3104	1	2954	-70	2954	70	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGTGATTGTCTCTG	-985224	False	NA	NA	False	NA	NA	NA	985375	985155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_985200_985400
WTC11_00011356	chr10	-	1875	4	NNC	ENSG00000067064.12	novel	1066	4	NA	NA	-7233	-479	at_least_one_novel_splicesite	TRUE	canonical	1	24	junction_3	450.801508426935	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGTTAAAATTTTGATA	-1055603	False	NA	10	True	AGTAAA	-27	NA	1056352	1039897	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_1041505_1042631_1042763_1043300_1043394_1056308
WTC11_00011357	chr10	-	1088	3	Antisense	novelGene_ENSG00000047056.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	2.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAAGATAGGCCAGGC	-1055946	True	NA	NA	False	AATACA	-2	NA	1056695	1053313	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr10_-_1053937_1054167_1054246_1056308
WTC11_00011358	chr10	-	466	3	FSM	ENSG00000185736.16	ENST00000469464.1	1741	3	0	1275	0	-1275	multi-exon	FALSE	canonical	2	7	junction_2	3.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCACGGCTTCCTC	-1240336	True	NA	NA	False	NA	NA	NA	1240530	1216950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_1217120_1233693_1233846_1240385
WTC11_00011359	chr10	-	1762	13	FSM	ENSG00000107959.17	ENST00000678811.1	1762	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	59.131855956742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3149699	False	NA	-1	True	AATAAA	-18	NA	3149710	3137727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3143605_3143732_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620
WTC11_00011362	chr10	-	683	2	NNC	ENSG00000196372.13	novel	2717	6	NA	NA	33	-15690	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCATTCCCTATGGAC	-5665277	False	NA	NA	False	AATAAA	-29	NA	5666545	5664661	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_5665308_5666508
WTC11_00011363	chr10	-	1599	6	FSM	ENSG00000134470.21	ENST00000532948.5	1581	6	0	-18	0	-3	multi-exon	FALSE	canonical	2	3	junction_4	3.86781592116274	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATTAAGAGAATCACCAA	-5977948	False	NA	NA	False	AATAAA	-26	NA	5978038	5952374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5966144_5966340_5977776
WTC11_00011364	chr10	-	1847	7	FSM	ENSG00000134470.21	ENST00000525219.6	1850	7	0	3	0	-3	multi-exon	FALSE	canonical	2	7	junction_4	2.54405625374562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATTAAGAGAATCACCAA	NA	False	NA	NA	False	AATAAA	-26	NA	5978187	5952374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977776
WTC11_00011366	chr10	-	4025	5	Antisense	novelGene_ENSG00000285845.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_4	73.8562793538911	51	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAATGACTGCTGCAAT	-6801835	True	NA	-33	True	AATAAA	-14	NA	6802595	6786869	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr10_-_6790058_6791645_6792075_6792455_6792555_6800278_6800562_6802569
WTC11_00011367	chr10	-	7534	19	NIC	ENSG00000198879.13	novel	7922	21	NA	NA	38376	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	5.03567519716652	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGGGTCTTTG	NA	False	NA	0	True	AATAAA	-17	NA	7370369	7158623	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_7163911_7170927_7171057_7171894_7172159_7172494_7172662_7175989_7176166_7188623_7188734_7197547_7197688_7200413_7200485_7202479_7202523_7205814_7205929_7220410_7220538_7227854_7227938_7243557_7243706_7248547_7248650_7276891_7276990_7283903_7283960_7285865_7285955_7367648_7367890_7370280
WTC11_00011370	chr10	-	286	1	FSM	ENSG00000234175.1	ENST00000442321.1	338	1	113	-61	113	61	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAAACTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	13139420	13139134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13139100_13139400
WTC11_00011372	chr10	-	3184	9	NNC	ENSG00000086475.15	novel	3265	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	342	junction_2	1696.18836936674	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	-13319297	True	NA	-17	True	AATAAA	-29	NA	13348223	13317427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323042_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336346_13338704_13338809_13344757_13345029_13347999
WTC11_00011373	chr10	-	2785	10	NNC	ENSG00000086475.15	novel	3265	9	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_7	2017.78965977901	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	-13319327	True	NA	-18	True	AATAAA	-17	NA	13348253	13318079	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323042_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13340690_13340909_13344757_13345029_13347999
WTC11_00011375	chr10	-	1701	3	FSM	ENSG00000165626.19	ENST00000440282.5	6524	3	0	4823	0	-595	multi-exon	FALSE	canonical	3	17	junction_1	3.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCCTTCAGGGGAGCAC	NA	False	NA	NA	False	AATAGA	-13	NA	13481073	13445910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13447317_13452538_13452659_13480898
WTC11_00011378	chr10	-	3257	5	NNC	ENSG00000065809.14	novel	2633	4	NA	NA	0	63439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.9362824535309	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAGCCTGTAAACAG	-14601408	True	NA	NA	False	NA	NA	NA	14604389	14455117	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_14455145_14518561_14521307_14521868_14522020_14530331_14530516_14604239
WTC11_00011382	chr10	-	2025	2	FSM	ENSG00000165985.10	ENST00000298943.4	2376	2	351	0	351	0	multi-exon	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAGAAATTTATTCTTT	-16521507	False	NA	NA	False	AATACA	-19	NA	16521528	16513733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16514708_16520477
WTC11_00011383	chr10	-	1423	10	NNC	ENSG00000148484.18	novel	3730	9	NA	NA	0	6361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.177059753013	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATGAGAAAGTAGTTAT	-16807231	True	NA	NA	False	NA	NA	NA	16817383	16584249	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_16584281_16592907_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
WTC11_00011384	chr10	-	2722	9	NIC	ENSG00000107614.22	novel	1697	10	NA	NA	0	1061	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	66.1683459064831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACCATTCAACAATTAA	-17199757	True	NA	NA	False	AAAACA	-37	NA	17201672	17150352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_17152100_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17168840_17168918_17174550_17174661_17201570
WTC11_00011386	chr10	-	1868	3	FSM	ENSG00000229124.8	ENST00000605833.2	1901	3	33	0	33	0	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTAGTGCTCTGACTGT	-17229959	True	NA	NA	False	AATAAA	-18	NA	17229985	17214245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17215365_17216166_17216275_17229344
WTC11_00011387	chr10	-	3644	13	NIC	ENSG00000241058.4	novel	2166	11	NA	NA	-200	32973	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	43.3444697228557	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCAATTACATTTGCACCA	-18651766	False	NA	18	True	AATAAA	-45	NA	18651787	18512587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_18513661_18542068_18542178_18545464_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
WTC11_00011388	chr10	-	656	2	FSM	ENSG00000240291.1	ENST00000436485.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTGATTTATTTTGTT	-18544375	False	NA	NA	False	NA	NA	NA	18544387	18541585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_18542178_18544323
WTC11_00011390	chr10	-	2262	2	FSM	ENSG00000285852.1	ENST00000647925.1	2349	2	0	87	0	-87	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCAGCTTTTTGTTCTT	-19816245	False	NA	-86	True	AATAAA	-28	NA	19816278	19812458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_19812844_19814401
WTC11_00011393	chr10	-	6514	4	FSM	ENSG00000180592.17	ENST00000449193.7	6601	4	87	0	87	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	-21525548	False	NA	-5	True	ATTAAA	-18	NA	21525595	21513474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_21519659_21521388_21521481_21523682_21523872_21525546
WTC11_00011405	chr10	-	4144	14	NIC	ENSG00000107897.20	novel	3971	15	NA	NA	-122	4	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	51.0693924012876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATTACTTGTTACTA	-27240778	False	NA	3	True	AATAAA	-22	NA	27241001	27195209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
WTC11_00011406	chr10	-	3882	13	NIC	ENSG00000107897.20	novel	3903	13	NA	NA	2	4	combination_of_known_junctions	TRUE	canonical	3	26	junction_12	38.0930877369285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATTACTTGTTACTA	-27239958	True	NA	3	True	AATAAA	-22	NA	27240782	27195209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240475_27240673
WTC11_00011407	chr10	-	3843	14	NIC	ENSG00000107897.20	novel	3838	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	57.4092543516035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	-27241866	True	NA	-1	True	AATAAA	-18	NA	27242089	27195213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
WTC11_00011410	chr10	-	2231	3	NNC	ENSG00000254635.6	novel	2323	3	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	23	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCCAACTTTTCA	-28531799	True	NA	NA	False	AATAAA	-23	NA	28532688	28522651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_28524575_28525947_28526009_28532441
WTC11_00011412	chr10	-	8149	37	FSM	ENSG00000197321.16	ENST00000375398.6	8201	37	62	-10	49	0	multi-exon	FALSE	canonical	0	0	junction_36	34.3730442765768	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-29634759	False	151	-6	True	AATAAA	-42	NA	29634910	29457337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29532001_29532173_29532528_29533459_29535988_29536070_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29634419
WTC11_00011421	chr10	-	3770	16	FSM	ENSG00000150093.20	ENST00000678120.1	3755	16	0	-15	0	0	multi-exon	FALSE	canonical	1	2	junction_7	497.513077438395	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	-32929358	True	NA	-1	True	ATTAAA	-18	NA	32958253	32900317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920398_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
WTC11_00011424	chr10	-	3295	19	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_15	57.7133454836365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTAGTGGCTGTTGA	-34811797	True	NA	NA	False	AATAAA	-13	NA	34815278	34312264	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011425	chr10	-	3439	20	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	67.0568039683428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTAGTGGCTGTTGA	-34811815	True	NA	NA	False	AATAAA	-13	NA	34815296	34312264	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011426	chr10	-	3357	19	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	26	-18	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	63.5666511293655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTACTTTTAATGAA	-34811789	True	NA	NA	False	TTTAAA	-7	NA	34815270	34312281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011427	chr10	-	3410	20	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	18	-18	combination_of_known_junctions	FALSE	canonical	3	132	junction_9	46.9338545572501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTACTTTTAATGAA	-34811797	True	NA	NA	False	TTTAAA	-7	NA	34815278	34312281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011428	chr10	-	5895	15	NIC	ENSG00000148498.16	novel	799	5	NA	NA	0	3256	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	81.3999009676979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATTTTCATAGTTTGT	-34811815	True	NA	NA	False	NA	NA	NA	34815296	34342941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011429	chr10	-	5059	15	NIC	ENSG00000148498.16	novel	799	5	NA	NA	7	2325	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	72.6209406466769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTCATTGTTTCA	-34811808	True	NA	NA	False	AATAAA	-18	NA	34815289	34343872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347955_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011432	chr10	-	6065	6	NNC	ENSG00000215146.5	novel	6590	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4064921380566	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTACTTTTTTATTGGG	-42361148	True	NA	-14	True	ATTAAA	-27	NA	42367974	42331865	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_42332394_42333159_42338241_42340500_42340557_42344253_42344409_42360948_42361035_42367815
WTC11_00011434	chr10	-	8819	6	ISM	ENSG00000234420.8	ENST00000689225.1	2192	7	181	-6290	124	0	3prime_fragment	FALSE	canonical	3	9	junction_4	5.95315042645489	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCAAAATGTGTATGG	-42551156	False	NA	84	True	AATAAA	-33	NA	42552642	42513509	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_42521128_42523181_42523306_42523611_42523739_42550556_42550616_42551576_42551815_42551989
WTC11_00011437	chr10	-	956	5	NIC	ENSG00000196693.15	novel	707	4	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	28.8877136513086	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTCTACATAATTTTAA	-42636673	True	NA	NA	False	NA	NA	NA	42638650	42582690	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294_42632440_42638473
WTC11_00011438	chr10	-	3131	12	NIC	ENSG00000198915.12	novel	3264	13	NA	NA	25	-9	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	21.0108197235269	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCCCTCCCTTGCCTG	-43202816	True	NA	-12	True	AATAAA	-9	NA	43203794	43194543	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
WTC11_00011439	chr10	-	3101	12	NNC	ENSG00000198915.12	novel	3264	13	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	19.662440597442	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	-43202887	True	NA	-3	True	AATAAA	-18	NA	43203865	43194534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
WTC11_00011465	chr10	-	4297	2	NNC	ENSG00000289527.1	novel	676	2	NA	NA	-9	0	intron_retention	FALSE	canonical	3	304	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022904	True	NA	-1	True	AATAAA	-22	NA	52039205	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52037849_52038964
WTC11_00011466	chr10	-	957	3	FSM	ENSG00000289527.1	ENST00000690827.1	962	3	0	5	0	-1	multi-exon	FALSE	canonical	3	109	junction_1	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	-52022916	True	NA	-6	True	AATAAA	-17	NA	52039217	52033797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034218_52036950_52037235_52038964
WTC11_00011467	chr10	-	1568	3	NNC	ENSG00000289527.1	novel	1022	3	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	97.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTGTTCACA	-52022905	True	NA	2	True	AATAAA	-25	NA	52039206	52033789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034218_52036950_52037849_52038964
WTC11_00011468	chr10	-	744	3	NIC	ENSG00000289527.1	novel	938	3	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	-52022891	True	NA	-9	True	AATAAA	-14	NA	52039192	52033800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52034215_52036950_52037053_52038964
WTC11_00011469	chr10	-	8133	2	FSM	ENSG00000285958.1	ENST00000648218.1	6744	2	-1390	1	-1390	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGAGTGTGGCGTTTCT	-52956949	False	NA	-6	True	AATAAA	-16	NA	52956975	52946431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52952971_52955381
WTC11_00011474	chr10	-	1705	6	ISM	ENSG00000122952.17	ENST00000489649.6	1621	8	933	-41	49	0	intron_retention	FALSE	canonical	3	206	junction_3	285.814905139673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56346083	False	14249	-6	True	AATAAA	-20	NA	56360332	56357437	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686
WTC11_00011489	chr10	-	8646	26	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_20	104.293938462405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTTCCAGAGTACT	-63522079	False	NA	-9	True	ATTAAA	-17	NA	63522104	63167224	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215548_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63521737
WTC11_00011493	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	43.058100283222	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	-68072393	True	NA	-15	True	AATAAA	-18	NA	68075283	68067688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
WTC11_00011496	chr10	-	425	1	FSM	ENSG00000232734.1	ENST00000444398.1	400	1	-26	1	-26	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTCTGTGGGGATCA	NA	False	NA	NA	False	GGGGCT	-40	NA	69433397	69432972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_69433000_69433400
WTC11_00011498	chr10	-	2407	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-8	-1224	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	58.2027108952457	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGTATTTATATATCAAA	-70144403	True	NA	-17	True	AATAAA	-19	NA	70146664	70139206	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70140142_70142667_70142765_70143841_70143973_70145420
WTC11_00011499	chr10	-	1052	2	NIC	ENSG00000156521.14	novel	2620	4	NA	NA	2	-1229	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTGTATTTATATA	-70144393	True	NA	-22	True	AATAAA	-14	NA	70146654	70139211	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_70140142_70146532
WTC11_00011500	chr10	-	6088	7	FSM	ENSG00000079332.15	ENST00000373238.5	3227	7	35	-2896	35	-19	multi-exon	FALSE	canonical	3	40	junction_6	151.03274111559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAATTTTTGATTTCAG	-70147367	False	NA	-36	True	AATATA	-11	NA	70162996	70147307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689
WTC11_00011502	chr10	-	2911	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	1	-6	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.2928563989645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379242	True	NA	-3	True	AATAAA	-22	NA	70382625	70298969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
WTC11_00011503	chr10	-	2966	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	-36	-6	-12	0	multi-exon	FALSE	canonical	3	11	junction_2	48.451579494951	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379279	True	NA	-3	True	AATAAA	-22	NA	70382662	70298969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
WTC11_00011508	chr10	-	2061	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGGTCTATCATTT	-72214015	False	1907	-12	True	ATTAAA	-16	NA	72215922	72096520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
WTC11_00011519	chr10	-	6106	8	NNC	ENSG00000242338.6	novel	1716	10	NA	NA	-8	11	intron_retention	FALSE	canonical	3	7	junction_1	20.3600248586513	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGTCTTTCAGA	-73729341	True	NA	NA	False	AATAAA	-29	NA	73730477	73715831	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_73716177_73718014_73719300_73720537_73720660_73721361_73721505_73722388_73726041_73727292_73727483_73728378_73728588_73730317
WTC11_00011525	chr10	-	1024	5	NNC	ENSG00000079393.21	novel	1778	8	NA	NA	2613	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	4.63680924774785	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGATCTTTTGGTGGTC	-75106367	True	NA	NA	False	AATAAA	-20	NA	75106486	75094433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75106397
WTC11_00011526	chr10	-	809	5	FSM	ENSG00000165644.11	ENST00000470947.5	796	5	0	-13	0	0	multi-exon	FALSE	canonical	3	220	junction_3	17.1810215063017	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	-75235500	False	NA	-7	True	AATAAA	-20	NA	75235512	75233970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266
WTC11_00011528	chr10	-	669	5	NIC	ENSG00000165644.11	novel	1250	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	99.0388181472295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	-75234432	True	NA	-7	True	AATAAA	-20	NA	75235940	75233970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235834
WTC11_00011530	chr10	-	4303	20	FSM	ENSG00000151208.17	ENST00000424842.5	4292	20	0	-11	0	11	multi-exon	FALSE	canonical	1	1	junction_17	47.779734690467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGAGTTTTTAATCT	-77829396	False	NA	0	True	AATAAA	-27	NA	77829442	77790779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77792544_77794007_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805862_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77824383_77824477_77828881_77828986_77829354
WTC11_00011537	chr10	-	3261	8	NIC	ENSG00000151224.13	novel	3384	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_6	5.48839220351387	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-80289521	True	NA	0	True	AATAAA	-18	NA	80289658	80271819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80285511_80285590_80289332
WTC11_00011548	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	48	junction_1	91.3831980666517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	-87342329	False	466	NA	False	AATGAA	-4	NA	87342377	87319187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
WTC11_00011552	chr10	-	1199	3	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	2	-8455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	-89643875	False	NA	-8	True	AATAAA	-13	NA	89643885	89634149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_89635066_89639148_89639243_89643696
WTC11_00011555	chr10	-	6716	24	FSM	ENSG00000119912.18	ENST00000679232.1	6700	24	0	-16	0	0	multi-exon	FALSE	canonical	2	3	junction_14	82.1403428092688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	-92570842	True	NA	-16	True	AATAAA	-6	NA	92574096	92452255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92480917_92483254_92483338_92487195_92487319_92490492_92490596_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
WTC11_00011568	chr10	-	1370	9	ISM	ENSG00000213390.11	ENST00000358308.7	5390	11	56	7516	6	-4383	5prime_fragment	FALSE	canonical	3	21	junction_4	107.045478068903	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTTTACTGTGTTTC	-97287798	True	NA	NA	False	NA	NA	NA	97292617	97229691	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
WTC11_00011571	chr10	-	3271	17	FSM	ENSG00000052749.14	ENST00000479481.5	3271	17	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_8	34.3636344847282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-97373579	False	NA	-12	True	AATAAA	-17	NA	97373593	97356700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97372167_97372735_97372804_97373045_97373201_97373574
WTC11_00011572	chr10	-	4476	35	FSM	ENSG00000052749.14	ENST00000536831.5	4476	35	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_34	57.5711985855288	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-97425994	True	NA	-12	True	AATAAA	-17	NA	97426074	97356700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092_97401369_97426022
WTC11_00011583	chr10	-	1905	3	ISM	ENSG00000107521.20	ENST00000465957.1	922	4	894	-484	-620	484	3prime_fragment	FALSE	canonical	3	159	junction_1	118	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTAATTTTTGAT	-98442122	False	NA	-1	True	AATAAA	-19	NA	98446033	98441903	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_98442958_98443123_98443241_98445299
WTC11_00011586	chr10	-	3186	13	NNC	ENSG00000107566.14	novel	1453	12	NA	NA	0	34331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.119774280774	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCCGGGCTTGGTGGCC	-100181347	True	NA	NA	False	ACTAAA	-31	NA	100186029	100115762	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100115789_100150096_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
WTC11_00011592	chr10	-	891	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	6	0	6	0	multi-exon	FALSE	canonical	3	514	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976523	False	NA	-42	True	AATAAA	-15	NA	100987280	100986275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987089
WTC11_00011593	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987312
WTC11_00011599	chr10	-	770	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	-15	0	8	multi-exon	FALSE	canonical	1	2	junction_4	30.3016088681773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTCCTGTGCTGG	-101765883	True	NA	2	True	AATAAA	-28	NA	101783384	101781316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
WTC11_00011617	chr10	-	1450	4	NNC	ENSG00000076685.19	novel	4688	20	NA	NA	2	27236	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	28.6123516451666	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTGCTTGGTTAT	-103185687	True	NA	-1	True	AATAAA	-22	NA	103193295	103142047	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103143169_103174857_103174983_103181184_103181329_103193235
WTC11_00011627	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	-110918013	True	NA	-66	True	ATTAAA	-24	NA	110919201	110899955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110901537_110901613_110919120
WTC11_00011631	chr10	-	2916	11	NIC	ENSG00000023041.12	novel	2170	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	61.9499798224342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-112443471	True	NA	-10	True	AATAAA	-26	NA	112446901	112430296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00011632	chr10	-	2231	12	NNC	ENSG00000023041.12	novel	2170	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	79.674855786679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112443469	True	NA	-13	True	AATAAA	-23	NA	112446899	112430299	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433617_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
WTC11_00011650	chr10	-	896	4	FSM	ENSG00000151923.18	ENST00000463089.6	907	4	11	0	11	0	multi-exon	FALSE	canonical	3	36	junction_3	141.356130236915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGGACCACATTTGAA	-119577173	False	NA	NA	False	NA	NA	NA	119577203	119575218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119576846_119576906_119577079
WTC11_00011651	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	63.806269284452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589802	True	NA	-20	True	AATAAA	-28	NA	119596964	119575398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
WTC11_00011652	chr10	-	2334	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	-13	0	0	multi-exon	FALSE	canonical	3	30	junction_8	81.1799698201471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589867	True	NA	-20	True	AATAAA	-28	NA	119597029	119575398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
WTC11_00011653	chr10	-	1895	15	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	103.919047182636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAGACAATTCTGAC	-119596472	False	65	-46	True	AATAAA	-2	NA	119596495	119575424	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_119575792_119576610_119576751_119576846_119576906_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
WTC11_00011655	chr10	-	4669	18	NNC	ENSG00000066468.24	novel	4624	18	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	133.526872222547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTGTCTTACCAAATGGT	-121593434	True	NA	1	True	AATAAA	-26	NA	121598487	121478329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503941_121515115_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
WTC11_00011656	chr10	-	4265	17	NIC	ENSG00000066468.24	novel	4369	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	114	junction_15	132.600433634283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGACAAAATAAATGTCA	-121593343	True	NA	-39	True	AATAAA	-26	NA	121598396	121478369	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
WTC11_00011658	chr10	-	4307	17	NIC	ENSG00000066468.24	novel	3061	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	179.890200886541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAAAATAAATGTCACG	-121593380	True	NA	-37	True	AATAAA	-28	NA	121598433	121478367	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
WTC11_00011676	chr10	-	546	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTATTCCCTCTTGCT	-132329967	True	NA	-7	True	AATAAA	-17	NA	132331830	132330288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_132330486_132331481
WTC11_00011686	chr10	+	3475	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6384277	6387752	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_6384300_6387800
WTC11_00011707	chr10	+	2616	5	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62973	2195	at_least_one_novel_splicesite	TRUE	non_canonical	3	62	junction_4	13.729530217746	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTTCTTTCCTCT	6800002	True	NA	15	True	AATAAA	-24	NA	6800390	6842907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390_6840429_6840459
WTC11_00011708	chr10	+	2880	2	NNC	ENSG00000285988.1	novel	614	4	NA	NA	102579	2195	at_least_one_novel_splicesite	FALSE	non_canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTTCTTTCCTCT	6839985	False	NA	15	True	AATAAA	-24	NA	6839996	6842907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_6840429_6840459
WTC11_00011709	chr10	+	8073	14	FSM	ENSG00000048740.19	ENST00000542579.5	7982	14	-91	0	-33	0	multi-exon	FALSE	canonical	1	1	junction_10	22.5913006244732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTTCTCCGGAGT	11017824	False	NA	NA	False	AATAAA	-11	NA	11017838	11336667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
WTC11_00011716	chr10	+	1257	12	NIC	ENSG00000151465.14	novel	1321	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	789.464542878786	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	12173639	True	NA	33	True	AATAAA	-18	NA	12196222	12250589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12246148_12246278_12249580_12249719_12250310
WTC11_00011718	chr10	+	1185	12	NIC	ENSG00000151465.14	novel	1321	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	227	junction_4	750.067644332416	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	12173644	True	NA	33	True	AATAAA	-18	NA	12196227	12250589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
WTC11_00011719	chr10	+	2133	16	NIC	ENSG00000123240.17	novel	3521	16	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	65.8036135448165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGCTTTTGTGTTAT	13096213	True	NA	8	True	NA	NA	NA	13100176	13136922	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
WTC11_00011734	chr10	+	1062	5	FSM	ENSG00000078403.17	ENST00000377091.7	1062	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.8629879327096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21534267	False	NA	8	True	AATAAA	-20	NA	21534344	21557182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21551815_21551922_21556642
WTC11_00011742	chr10	+	1297	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	9	19385	9	-19179	5prime_fragment	FALSE	canonical	3	173	junction_3	16.3137637867198	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAGGTGGACCTCACTT	27150266	True	NA	2	True	AATAAA	-16	NA	27155378	27167539	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
WTC11_00011743	chr10	+	2932	11	NIC	ENSG00000120539.15	novel	2968	11	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	61.274790901316	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAATTTACTTGCATAT	27150296	True	NA	17	True	AATAAA	-22	NA	27155408	27186924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27181479_27181582_27186378
WTC11_00011745	chr10	+	1715	4	FSM	ENSG00000099246.18	ENST00000682963.1	1715	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	239.020687156758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATAATACCCCTCAGTAA	27500086	True	NA	NA	False	NA	NA	NA	27504317	27539284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27533734_27533854_27533927_27533995_27537875
WTC11_00011746	chr10	+	5021	2	FSM	ENSG00000099246.18	ENST00000682777.1	6518	2	1352	145	-193	-145	multi-exon	FALSE	canonical	3	525	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATAAATATTTATATAT	27533670	False	NA	NA	False	AATACA	-6	NA	27533734	27542636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27533995_27537875
WTC11_00011747	chr10	+	3660	15	FSM	ENSG00000095787.24	ENST00000681112.1	3655	15	-5	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	165.2973202494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGCTACTATAAAATTA	28532118	True	NA	46	True	AATAAA	-9	NA	28532770	28620979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28535909_28536060_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
WTC11_00011752	chr10	+	977	6	NIC	ENSG00000095794.20	novel	2232	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	45.0066661729127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGGCTTCTTTTCTTTG	35125332	True	NA	6	True	AATATA	-13	NA	35126958	35211875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211655
WTC11_00011754	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	35125490	False	NA	-18	True	TTTAAA	-30	NA	35127116	35212435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127194_35206894_35207052_35211253
WTC11_00011755	chr10	+	1920	6	FSM	ENSG00000095794.20	ENST00000374728.7	1933	6	0	13	0	-8	multi-exon	FALSE	canonical	3	5	junction_1	56.6053001052022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCCCTCACCACAGGAT	35127433	False	NA	-9	True	AATAAA	-20	NA	35127456	35212942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127568_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211655
WTC11_00011769	chr10	+	6054	14	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	2	12	junction_13	21.9137632037831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAATTAAGAGTTTTT	48302261	True	NA	14	True	AATAAA	-23	NA	48306691	48439352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48308094_48308289_48325896_48325966_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
WTC11_00011770	chr10	+	2856	14	NNC	ENSG00000178440.8	novel	3593	18	NA	NA	14	23	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	29.2143678682396	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTACACATGGCACCT	49938142	True	NA	14	True	AATAAA	-20	NA	49942070	50010499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973079_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
WTC11_00011771	chr10	+	1886	3	FSM	ENSG00000204149.15	ENST00000681530.1	2188	3	221	81	221	9	multi-exon	FALSE	canonical	3	78	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACCTCTTTTTCAT	NA	False	NA	23	True	AATAAA	-29	NA	50004684	50010508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50004721_50008024_50008077_50008710
WTC11_00011776	chr10	+	1905	8	NNC	ENSG00000170312.17	novel	1889	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	613.239607597659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763042	True	NA	NA	False	ATTAAA	-7	NA	60778477	60794843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792122_60792290_60793876
WTC11_00011778	chr10	+	1507	4	FSM	ENSG00000096746.18	ENST00000478698.1	1507	4	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_2	137.465955381283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGATGTTGATACTT	68338581	False	NA	26	True	AATAAA	-13	NA	68338805	68342269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68339227_68339439_68339556_68341173_68341852_68341977
WTC11_00011782	chr10	+	5648	6	FSM	ENSG00000165732.14	ENST00000692943.1	4228	6	-41	-1379	-40	-1	multi-exon	FALSE	canonical	3	725	junction_4	27.2572926021643	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	68970916	False	NA	13	True	AATAAA	-15	NA	68970955	68985067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
WTC11_00011785	chr10	+	789	4	NNC	ENSG00000236154.2	novel	533	3	NA	NA	-2464	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.4966665185054	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	69572442	False	NA	13	True	AATAAA	-28	NA	69572453	69577154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_69572685_69574881_69575149_69576018_69576138_69576982
WTC11_00011786	chr10	+	770	4	NNC	ENSG00000236154.2	novel	533	3	NA	NA	-2062	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	36.0832371053374	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	69572844	False	NA	13	True	AATAAA	-28	NA	69572855	69577154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_69573068_69574881_69575149_69576018_69576138_69576982
WTC11_00011787	chr10	+	917	4	FSM	ENSG00000197467.17	ENST00000673830.1	2265	4	-4	1352	0	-1352	multi-exon	FALSE	canonical	0	0	junction_2	10.8423039781937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCACTTTTGTTTCTT	69801336	True	NA	NA	False	NA	NA	NA	69801905	69872210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69802718_69822368_69822439_69867797_69867806_69872183
WTC11_00011788	chr10	+	1389	18	FSM	ENSG00000197467.17	ENST00000684376.1	1389	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	8.73286755759795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAAGAGTATTTTAAAC	NA	False	NA	-56	True	CATAAA	-34	NA	69921882	69959083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69953947_69954026_69957003_69957043_69958698
WTC11_00011791	chr10	+	1693	1	FSM	ENSG00000280401.1	ENST00000624563.1	1728	1	-9	44	-9	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCATTGCACTCCAGCCT	70434805	False	NA	NA	False	NA	NA	NA	70434819	70436512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70434800_70436500
WTC11_00011792	chr10	+	4645	14	NIC	ENSG00000166224.17	novel	5778	15	NA	NA	-19	-1082	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	20.9524680445947	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTAATTACTGTGGATG	70809408	True	NA	12	True	ATTAAA	-16	NA	70815928	70880102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_70816127_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
WTC11_00011793	chr10	+	1211	1	FSM	ENSG00000279406.1	ENST00000623796.1	2132	1	-678	1599	-678	-1599	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTCTGAACTCGATACC	71363552	False	NA	NA	False	ATTAAA	-16	NA	71363564	71364775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71363600_71364800
WTC11_00011794	chr10	+	218	1	FSM	ENSG00000226701.1	ENST00000416278.1	636	1	382	36	382	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGCAATACTCTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	72190322	72190540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72190300_72190500
WTC11_00011795	chr10	+	1781	4	NNC	ENSG00000168209.6	novel	1744	3	NA	NA	0	74394	intron_retention	FALSE	non_canonical	0	0	junction_3	509.133250403729	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGATGGGTTCAAACCT	72269618	True	NA	NA	False	AAAAAG	-3	NA	72273918	72350430	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_72274061_72274156_72274422_72274694_72276037_72350398
WTC11_00011796	chr10	+	1091	9	FSM	ENSG00000156026.15	ENST00000604679.5	1074	9	-17	0	-17	0	multi-exon	FALSE	canonical	1	1	junction_2	185.104700102401	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAATGTATGCATATTTT	72687838	True	NA	NA	False	NA	NA	NA	72692125	72871545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72692302_72708282_72708357_72715110_72715227_72715853_72715903_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376
WTC11_00011797	chr10	+	2910	8	NNC	ENSG00000156026.15	novel	2937	8	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_7	119.748375644047	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACGATAGCATCTCAT	72687872	True	NA	5	True	AATAAA	-14	NA	72692159	72887688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_72692302_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885748
WTC11_00011798	chr10	+	1989	9	FSM	ENSG00000166321.14	ENST00000537969.5	2151	9	154	8	-1	-3	multi-exon	FALSE	canonical	1	2	junction_5	4.20565096031518	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTGTTCTGATGTCT	73110247	True	NA	NA	False	AATAAA	-11	NA	73110528	73131820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73110568_73114356_73114449_73119450_73119523_73120017_73120158_73122174_73122310_73125117_73125244_73125397_73125510_73126672_73126828_73130702
WTC11_00011799	chr10	+	834	1	FSM	ENSG00000138286.15	ENST00000607940.1	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGGTTTTACGGTC	NA	False	NA	20	True	AATAAA	-28	NA	73230472	73231306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73230500_73231300
WTC11_00011802	chr10	+	907	1	FSM	ENSG00000272791.1	ENST00000609434.1	935	1	21	7	21	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTATGAATGTGGTT	73630261	False	NA	-2	True	AATAAA	-10	NA	73630576	73631483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73630600_73631500
WTC11_00011803	chr10	+	1596	1	FSM	ENSG00000250959.3	ENST00000693003.1	653	1	-41	-902	-19	367	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGCTGAGCAAGCTGG	73730532	False	NA	NA	False	NA	NA	NA	73730542	73732138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73730500_73732100
WTC11_00011804	chr10	+	2190	3	FSM	ENSG00000196968.11	ENST00000394790.2	2175	3	-15	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	13	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTATTTTACTTATT	73771104	True	NA	39	True	NA	NA	NA	73772275	73776216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73773042_73773189_73773816_73775418
WTC11_00011809	chr10	+	5499	22	FSM	ENSG00000035403.18	ENST00000211998.10	5497	22	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	315.965324312337	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATATGTTACTTTAG	73953368	True	NA	15	True	AATAAA	-28	NA	73998113	74120169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74111908_74112113_74114183_74114388_74114794_74114900_74118022
WTC11_00011810	chr10	+	7034	17	FSM	ENSG00000156650.14	ENST00000372725.6	7027	17	-7	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.9372549000761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTGTCCTGTCATA	74824729	True	NA	8	True	AATAAA	-20	NA	74825491	75032293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74825675_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
WTC11_00011812	chr10	+	1425	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	-1	0	-1	0	multi-exon	FALSE	canonical	2	40	junction_1	908.496451544603	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	75210128	False	NA	10	True	AATAAA	-11	NA	75210152	75231444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
WTC11_00011813	chr10	+	286	1	FSM	ENSG00000228748.2	ENST00000600739.1	716	1	-207	637	93	-637	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCCCAATACCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	77782958	77783244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_77783000_77783200
WTC11_00011814	chr10	+	1802	1	FSM	ENSG00000233871.2	ENST00000632919.1	2194	1	392	0	392	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	77928022	77929824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_77928000_77929800
WTC11_00011815	chr10	+	718	6	FSM	ENSG00000138326.21	ENST00000465692.2	718	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5353.452209556	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACCTCTGACAGCAAGT	77943701	True	NA	NA	False	NA	NA	NA	78033890	78049164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614_78040748_78048980
WTC11_00011822	chr10	+	2160	9	FSM	ENSG00000165678.22	ENST00000687085.1	3847	9	14	1673	-2	-400	multi-exon	FALSE	canonical	3	12	junction_1	550.784837754272	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGATTGCTAAGTGTTT	84120870	True	NA	6	True	AATACA	-10	NA	84139571	84153168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_84139835_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
WTC11_00011840	chr10	+	3087	3	NIC	ENSG00000176273.15	novel	3036	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	4	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTCTATGTTTTTGGT	93892866	True	NA	NA	False	AATAAA	-20	NA	93893990	93909830	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_93894212_93906251_93906386_93907098
WTC11_00011842	chr10	+	7178	4	NIC	ENSG00000119969.15	novel	4987	10	NA	NA	0	-3528	intron_retention	FALSE	canonical	3	426	junction_3	83.4918492362511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATCGCGTCACTGCACT	94596861	True	NA	-38	True	NA	NA	NA	94596879	94610377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_94596957_94597034_94597112_94601527_94608027_94609852
WTC11_00011848	chr10	+	1050	8	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	-25	-120	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	179.553300596514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCACTTGCCCCATGG	97441077	True	NA	NA	False	NA	NA	NA	97446144	97456804	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97454713_97454800_97455659_97455784_97455973_97456045_97456776
WTC11_00011849	chr10	+	1637	10	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	163.459663918641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGATATGTAGCTTCT	97441155	True	NA	-1	True	AATAAA	-12	NA	97446222	97457360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455713_97455784_97455973_97456045_97456776
WTC11_00011850	chr10	+	3650	8	NIC	ENSG00000155252.13	novel	4189	9	NA	NA	36	-403	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	81.5893150267277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAATACAGTTCTGA	97638217	True	NA	7	True	TTTAAA	-17	NA	97640721	97676031	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97641178_97650940_97651142_97656284_97656417_97656820_97656975_97662906_97662969_97666437_97666572_97667060_97667121_97673580
WTC11_00011856	chr10	+	3603	9	NNC	ENSG00000166024.14	novel	3337	9	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	41.344399560279	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	98133132	False	NA	12	True	ATTAAA	-17	NA	98134706	98244894	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_98135025_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
WTC11_00011861	chr10	+	3742	5	FSM	ENSG00000107815.10	ENST00000643860.1	3722	5	-20	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_3	59.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	100980389	True	NA	12	True	ACTAAA	-15	NA	100987534	100994401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100989454_100989643_100989885_100990435_100990664_100990868_100991011_100993189
WTC11_00011863	chr10	+	5190	14	NNC	ENSG00000148840.11	novel	5328	14	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	113.648945618676	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAACTGCTGTTGTGCGT	102125139	True	NA	10	True	AATAAA	-18	NA	102133070	102150327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_102133222_102137849_102138039_102138719_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
WTC11_00011870	chr10	+	1340	4	FSM	ENSG00000107872.14	ENST00000369956.8	1340	4	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	53.7959106252511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102420620	True	NA	29	True	AATAAA	-16	NA	102420835	102423136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102421183_102421353_102421508_102421786_102422293_102422803
WTC11_00011871	chr10	+	1065	2	ISM	ENSG00000107872.14	ENST00000369956.8	1340	4	725	0	720	0	3prime_fragment	FALSE	canonical	3	259	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102421458	False	NA	29	True	AATAAA	-16	NA	102421560	102423136	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_102422293_102422803
WTC11_00011874	chr10	+	2963	10	NNC	ENSG00000138111.14	novel	2852	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	50.8252877664575	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102459018	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_102461451_102468954_102469198_102469992_102470076_102470277_102470495_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
WTC11_00011875	chr10	+	1113	8	NNC	ENSG00000138111.14	novel	823	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	61.0870907235009	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTTCACTAATGTG	102463605	False	NA	5	True	AATAAA	-17	NA	102465981	102472247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_102466088_102468286_102468333_102468752_102468843_102468954_102469198_102469992_102470076_102470922_102471118_102471272_102471397_102472021
WTC11_00011886	chr10	+	2982	6	FSM	ENSG00000119950.21	ENST00000651004.1	2995	6	13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAAACTGTGAACGA	110227004	True	NA	-17	True	TTTAAA	-39	NA	110227086	110287341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110227101_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
WTC11_00011888	chr10	+	1035	5	FSM	ENSG00000150593.18	ENST00000481353.5	1120	5	85	0	85	0	multi-exon	FALSE	canonical	3	128	junction_4	20.7062792408487	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAGCTTGTATATGAAG	NA	False	NA	NA	False	NA	NA	NA	110884855	110894179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090
WTC11_00011892	chr10	+	3446	12	NIC	ENSG00000148737.17	novel	4136	15	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	42.5578847420664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGGTCACTTGTTTCT	112950656	False	NA	11	True	AATAAA	-23	NA	112950669	113167676	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144014_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
WTC11_00011899	chr10	+	1332	8	NNC	ENSG00000119979.18	novel	2441	9	NA	NA	0	-218	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_7	135.623428233157	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTGTTAGTGTATTCA	119098464	True	NA	8	True	NA	NA	NA	119104085	119137608	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129544_119137056
WTC11_00011900	chr10	+	1845	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	124.575278446408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTCAACTACTTTTAG	119098491	True	NA	16	True	AATAAA	-13	NA	119104112	119137974	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119137056
WTC11_00011901	chr10	+	2682	10	NIC	ENSG00000119979.18	novel	2829	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	7	junction_2	142.18489093387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTTAGGTGGGTGA	119098491	True	NA	24	True	AATAAA	-21	NA	119104112	119137982	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119104198_119104763_119105007_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
WTC11_00011904	chr10	+	4545	29	NIC	ENSG00000120008.16	novel	4545	29	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	23	junction_1	40.5192540526056	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGTGTTCTCTGCA	120847059	True	NA	14	True	AATAAA	-16	NA	120851381	120909523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_120851528_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
WTC11_00011909	chr10	+	305	2	FSM	ENSG00000107902.14	ENST00000487190.1	305	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTCTGTCTCTAAAA	124488388	False	NA	NA	False	ATTAAA	-20	NA	124488428	124493877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_124488576_124493719
WTC11_00011918	chr10	+	627	4	FSM	ENSG00000151640.13	ENST00000493927.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.1825107171668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGATCTGTGAGTGTCT	132186557	True	NA	NA	False	NA	NA	NA	132186977	132192832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132187103_132190746_132190836_132192282_132192521_132192657
WTC11_00011921	chr10	+	2634	11	NNC	ENSG00000148814.18	novel	2113	11	NA	NA	21	-27	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	7.29725975966321	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCGTATTAAAAGAAAGG	132332025	False	NA	-26	True	NA	NA	NA	132332299	132375428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_132333107_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
WTC11_00011922	chr10	+	2746	15	NIC	ENSG00000068383.19	novel	3000	16	NA	NA	104	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	48.0724899054988	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCGTGTTGCTTTTTCTT	132535821	False	NA	19	True	AATAAA	-20	NA	132537952	132783480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_132538172_132607914_132607957_132645867_132645969_132690391_132690456_132697815_132697920_132708312_132708366_132710336_132710457_132726820_132726906_132749516_132749613_132749770_132749846_132765772_132765847_132777670_132777783_132780848_132780918_132781860_132781949_132782036
WTC11_00011940	chr10	-	1435	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	-309	0	-34	0	multi-exon	FALSE	canonical	1	4	junction_1	434.693250720807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	NA	False	NA	3	True	NA	NA	NA	12196178	12169721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
WTC11_00011943	chr10	-	1769	8	NIC	ENSG00000165626.19	novel	2378	9	NA	NA	-12	-1950	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	11.4944529656523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAAACGCATTTACA	-13528857	True	NA	NA	False	NA	NA	NA	13529026	13447265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_13447320_13452538_13452659_13480898_13481125_13492610_13492877_13496765_13496889_13499738_13500081_13526137_13526222_13528472
WTC11_00011947	chr10	-	3612	13	NIC	ENSG00000152457.18	novel	2463	15	NA	NA	-1	1008	combination_of_known_junctions	FALSE	canonical	1	4	junction_10	12.369316876853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTGTTATTCTGTGA	-14953659	True	NA	-10	True	AATAAA	-16	NA	14954032	14906870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_14909331_14919737_14919833_14922980_14923070_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
WTC11_00011954	chr10	-	1460	10	NNC	ENSG00000148484.18	novel	3730	9	NA	NA	0	6361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.177059753013	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATGAGAAAGTAGTTAT	-16807272	True	NA	NA	False	NA	NA	NA	16817424	16584249	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_16584281_16592911_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
WTC11_00011955	chr10	-	3283	8	NIC	ENSG00000107614.22	novel	12918	11	NA	NA	0	2160	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	57.6608663670958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCTGTTTCCTGATAT	-17199757	True	NA	-18	True	TATAAA	-11	NA	17201672	17146755	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17174550_17174661_17201570
WTC11_00011956	chr10	-	1333	11	NNC	ENSG00000107614.22	novel	12918	11	NA	NA	9	40	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	46.431562541013	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATATTACTGTATTTT	-17199733	True	NA	-5	True	ATTAAA	-21	NA	17201648	17148875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_17149141_17153506_17153637_17154676_17154735_17157461_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
WTC11_00011957	chr10	-	2466	11	NIC	ENSG00000107614.22	novel	1697	10	NA	NA	3	685	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	46.7406675176981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAAGCAACTTTATTG	-17199739	True	NA	NA	False	AATAAA	-11	NA	17201654	17150728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_17152100_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
WTC11_00011967	chr10	-	1216	1	Genic_Genomic	ENSG00000150867.14	novel	NA	NA	NA	NA	3583	17	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTTCAGTTTGGGA	-22536024	False	NA	1	True	AAGAAA	-34	NA	22536052	22534836	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_22534800_22536100
WTC11_00011977	chr10	-	4842	18	NIC	ENSG00000165322.18	novel	4958	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	42.1999688417209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	-31920994	True	NA	-6	True	AATAAA	-18	NA	31928808	31805436	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
WTC11_00011980	chr10	-	4971	24	NIC	ENSG00000148498.16	novel	5980	25	NA	NA	35	-935	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	67.0592379830384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACGCTTGTTCGGTCCTG	-34811780	True	NA	-1	True	AATAAA	-26	NA	34815261	34110495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011981	chr10	-	4847	23	NIC	ENSG00000148498.16	novel	5971	25	NA	NA	12	-935	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	79.1129149114424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACGCTTGTTCGGTCCTG	-34811803	True	NA	-1	True	AATAAA	-26	NA	34815284	34110495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011982	chr10	-	3930	22	NIC	ENSG00000148498.16	novel	5971	25	NA	NA	0	-1555	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	77.868311416792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGTATTTTGGGAGTT	-34811815	True	NA	-2	True	AATAAA	-17	NA	34815296	34111115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011983	chr10	-	3496	21	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	80	junction_6	60.6997528825283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	-34811815	True	NA	NA	False	AATAAA	-16	NA	34815296	34312261	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011984	chr10	-	3445	20	NIC	ENSG00000148498.16	novel	3364	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	62.047743211765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	-34811815	True	NA	NA	False	AATAAA	-16	NA	34815296	34312261	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337277_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011985	chr10	-	3349	20	NIC	ENSG00000148498.16	novel	3395	21	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	78.7839009385256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAATGAATTCTTAGT	-34811815	True	NA	NA	False	AATAAA	-4	NA	34815296	34312273	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337277_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011986	chr10	-	4923	14	NIC	ENSG00000148498.16	novel	799	5	NA	NA	0	2323	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	79.2924330616005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTATTTCATTGTTT	-34811815	True	NA	NA	False	AATAAA	-16	NA	34815296	34343874	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
WTC11_00011995	chr10	-	2105	6	ISM	ENSG00000172671.20	ENST00000344646.10	3760	10	10	23558	0	648	5prime_fragment	FALSE	canonical	3	29	junction_5	17.1464281994822	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTGACGAATTTTTACA	-45671881	True	NA	NA	False	AATAAA	-21	NA	45672762	45639057	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_45639964_45648293_45648535_45651965_45652034_45652983_45653060_45663541_45663843_45672249
WTC11_00012006	chr10	-	3128	15	NIC	ENSG00000254929.6	novel	1594	12	NA	NA	0	15962	combination_of_known_splicesites	FALSE	canonical	2	18	junction_7	28.5593724563766	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCCCAAGTCACACA	-47551141	True	NA	NA	False	NA	NA	NA	47553483	47501853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_47503544_47504188_47504241_47507547_47507584_47510170_47510272_47517822_47517858_47520498_47520568_47522865_47522935_47542166_47542307_47543541_47543664_47544388_47544530_47545431_47545621_47549304_47549385_47550657_47550848_47551743_47551953_47553478
WTC11_00012013	chr10	-	940	3	NNC	ENSG00000289527.1	novel	831	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	-52022886	True	NA	-1	True	AATAAA	-22	NA	52039187	52033792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034355_52036950_52037106_52038964
WTC11_00012014	chr10	-	1556	3	NNC	ENSG00000289527.1	novel	1022	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	112.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-52022903	True	NA	-5	True	AATAAA	-18	NA	52039204	52033796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034215_52036950_52037849_52038964
WTC11_00012025	chr10	-	8506	24	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_21	98.5414808111472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTTCCAGAGTACT	-63261906	True	NA	-9	True	ATTAAA	-17	NA	63269243	63167224	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215618_63217206_63217332_63264650_63264765_63268662
WTC11_00012031	chr10	-	239	2	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTGGCTAACACAGTAA	NA	False	NA	NA	False	NA	NA	NA	68544237	68540623	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_-_68540654_68544028
WTC11_00012032	chr10	-	1388	12	NNC	ENSG00000180817.12	novel	1292	11	NA	NA	-65	31916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	472.835057642237	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAGAAAAAAAGCAAAA	-70216544	True	NA	NA	False	AAAAAG	-2	NA	70233499	70170918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70170945_70202834_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
WTC11_00012033	chr10	-	3972	4	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-877	1239	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	222.519412386625	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAAACTCTGTGTTTT	-70442256	True	NA	-9	True	AATAAA	-14	NA	70442558	70430696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70433089_70435285_70435984_70441474_70442275_70442476
WTC11_00012034	chr10	-	4805	9	ISM	ENSG00000107742.14	ENST00000373109.7	5224	11	16001	0	-2399	0	3prime_fragment	FALSE	canonical	3	10	junction_3	3.83242742918897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAATACTCTGAT	NA	False	NA	-2	True	AATAAA	-17	NA	72072550	72059033	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502
WTC11_00012035	chr10	-	300	2	FSM	ENSG00000107742.14	ENST00000483699.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCCCAGGTCGAACCC	-72089022	False	NA	NA	False	ATTAAA	-17	NA	72089032	72088356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72088615_72088990
WTC11_00012037	chr10	-	2150	1	FSM	ENSG00000272599.2	ENST00000608444.1	833	1	-802	-515	-675	515	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGGCAGGAGGATGGC	NA	False	NA	NA	False	NA	NA	NA	73126207	73124057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73124100_73126200
WTC11_00012038	chr10	-	2585	4	NNC	ENSG00000182180.14	novel	2580	3	NA	NA	0	44074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	678.376001934031	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCACATTTATAATTACA	-73230349	True	NA	NA	False	AAAAAG	-3	NA	73252625	73204768	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_73204796_73248850_73250992_73251762_73252024_73252469
WTC11_00012039	chr10	-	5511	7	Fusion	ENSG00000213551.7_ENSG00000182180.14	novel	2295	5	NA	NA	0	-937	intron_retention	FALSE	canonical	3	486	junction_4	436.186026828004	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTCAAGCATTTTTG	-73230349	True	NA	-67	True	NA	NA	NA	73252625	73242890	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009_73250992_73251762_73252024_73252469
WTC11_00012040	chr10	-	3149	15	NNC	ENSG00000107758.16	novel	3519	14	NA	NA	0	20325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.7004674949613	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGTGGTGGCGGATGCC	-73495937	True	NA	NA	False	AAAAAG	-2	NA	73495996	73416107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_73416140_73436806_73438421_73439871_73439902_73444724_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
WTC11_00012041	chr10	-	603	1	FSM	ENSG00000229659.1	ENST00000440913.1	438	1	-42	-123	-42	123	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCACTCAAGACGGAAGG	NA	False	NA	NA	False	NA	NA	NA	73422738	73422135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73422100_73422700
WTC11_00012042	chr10	-	6725	22	NIC	ENSG00000166348.20	novel	6792	24	NA	NA	14	0	intron_retention	FALSE	canonical	1	2	junction_21	16.7430900899337	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCATTCTTCCCTT	-73591175	True	NA	-13	True	AATAAA	-23	NA	73591324	73497537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73499189_73500654_73500839_73504849_73504991_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511_73576362_73591277
WTC11_00012046	chr10	-	2155	7	ISM	ENSG00000172650.15	ENST00000374094.9	2719	8	955	-22	727	14	3prime_fragment	FALSE	canonical	3	11	junction_4	12.0749971244533	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACCTCTTTTTCATTTT	NA	False	NA	-3	True	CATAAA	-23	NA	73697154	73674272	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_73676075_73676718_73676771_73680070_73680107_73682693_73682795_73692042_73692078_73694735_73694805_73697094
WTC11_00012047	chr10	-	871	4	FSM	ENSG00000272916.5	ENST00000603706.1	871	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.68178700572909	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGGGGAACTCTCTAG	-73803065	False	NA	NA	False	NA	NA	NA	73803077	73797128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73797590_73797821_73798060_73802673_73802777_73803008
WTC11_00012048	chr10	-	3535	13	FSM	ENSG00000166507.19	ENST00000299641.8	3535	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	10.8806658292996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCCTGGAGTGG	-73808721	False	NA	0	True	AATAAA	-20	NA	73808731	73801910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383
WTC11_00012050	chr10	-	3684	20	NIC	ENSG00000148660.21	novel	3818	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	47	junction_6	14.9078424767979	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871499	True	NA	0	True	AATAAA	-18	NA	73874571	73812500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
WTC11_00012051	chr10	-	1925	21	NIC	ENSG00000148660.21	novel	3878	23	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	29.5983107626094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAATCCATACCATG	-73871443	True	NA	NA	False	AAAAAG	-21	NA	73874515	73814266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73839538_73839602_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
WTC11_00012052	chr10	-	202	1	FSM	ENSG00000236900.1	ENST00000436122.1	256	1	94	-40	94	40	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATGAGTATGCATCTG	NA	False	NA	NA	False	NA	NA	NA	74344711	74344509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74344500_74344700
WTC11_00012053	chr10	-	311	1	FSM	ENSG00000213731.2	ENST00000395972.2	580	1	-159	428	-159	-428	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCTGCTTAGACGAC	NA	False	NA	NA	False	NA	NA	NA	74424173	74423862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74423900_74424200
WTC11_00012055	chr10	-	593	1	FSM	ENSG00000273248.1	ENST00000609182.1	354	1	-241	2	-241	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCGAAACATGTTGGGTT	-75409535	True	NA	NA	False	AATAAA	-19	NA	75409567	75408974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75409000_75409600
WTC11_00012056	chr10	-	5524	26	ISM	ENSG00000156113.24	ENST00000286627.10	6194	27	233903	8	-15	1	3prime_fragment	FALSE	canonical	2	4	junction_4	3.95049364004044	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTGGTTTGTTTA	NA	False	NA	0	True	ATTAAA	-23	NA	77403999	76884876	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_76887516_76889450_76889570_76891524_76891720_76909965_76910097_76914935_76915050_76944772_76944966_76949141_76949367_76953800_76953925_76969973_76970068_77011966_77012044_77019012_77019100_77027822_77027892_77039527_77039638_77073096_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399_77090511_77108480_77108573_77110172_77110344_77112366_77112443_77120972_77121049_77183420_77183533_77184822_77184917_77251194_77251257_77403861
WTC11_00012057	chr10	-	1670	1	FSM	ENSG00000213513.3	ENST00000439688.1	1540	1	-4	-126	-4	126	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAGAGAAGAGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	77781880	77780210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77780200_77781900
WTC11_00012059	chr10	-	688	6	NIC	ENSG00000225484.7	novel	1152	6	NA	NA	-33	-173	combination_of_known_junctions	FALSE	canonical	2	19	junction_3	70.4823382132006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAATTGATGAAAAAT	-79823116	True	NA	NA	False	ATTAAA	-19	NA	79826437	79797880	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_79798028_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
WTC11_00012062	chr10	-	3170	12	FSM	ENSG00000148672.10	ENST00000684699.1	5521	12	2351	0	56	0	multi-exon	TRUE	canonical	3	8	junction_11	186.843152500603	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTTTCTTTTCTGTGT	-87089777	False	NA	-5	True	ATTAAA	-19	NA	87089788	87050485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87089561
WTC11_00012078	chr10	-	1460	14	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	56	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	136.63396443303	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTTGGAAGTTCATTA	-93698371	True	NA	1	True	AATAAA	-25	NA	93702536	93669673	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681596_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702173
WTC11_00012079	chr10	-	1464	10	FSM	ENSG00000119977.22	ENST00000371209.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	45.2084336063063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAATGCTGCCTCCTT	-95689631	True	NA	NA	False	AATAAA	-29	NA	95693899	95683260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
WTC11_00012090	chr10	-	1836	5	NNC	ENSG00000119943.13	novel	2865	15	NA	NA	7	11521	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7.25861557047899	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCTTGTAAGTATAGAT	-98414647	True	NA	-36	True	AATAAA	-23	NA	98415151	98402426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_98403932_98407581_98407656_98407903_98407998_98410938_98410959_98415008
WTC11_00012092	chr10	-	1560	10	ISM	ENSG00000107521.20	ENST00000361490.9	3703	20	40	12946	-8	7	5prime_fragment	FALSE	canonical	3	27	junction_9	95.1919438442115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGAGGTGTGGTGGCTC	-98442984	True	NA	NA	False	AATAAA	-23	NA	98446895	98429143	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
WTC11_00012094	chr10	-	1335	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	0	485	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	147.885841858584	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGTAATTTTTGATT	-98443024	True	NA	0	True	AATAAA	-20	NA	98446935	98441902	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446886
WTC11_00012098	chr10	-	3516	21	NNC	ENSG00000213341.11	novel	3600	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	39.834030677299	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTGATCTCTATTCAT	-100226894	True	NA	-1	True	ATTAAA	-15	NA	100229596	100188366	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100189628_100190868_100190969_100193314_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
WTC11_00012101	chr10	-	4996	23	NIC	ENSG00000075826.17	novel	4634	26	NA	NA	-2	0	intron_retention	FALSE	canonical	1	6	junction_3	3.96914754467568	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTGTCATCTCCCAGT	-100516893	False	NA	-17	True	AATAAA	-17	NA	100516997	100486645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_100487796_100488026_100488099_100488857_100488975_100489251_100489399_100489702_100489762_100490007_100490323_100490705_100490884_100495384_100495547_100496257_100496432_100497134_100497281_100497666_100497794_100498028_100498208_100499159_100499259_100499523_100499599_100502253_100502485_100505360_100506202_100506320_100506421_100507424_100507568_100507907_100508049_100509006_100509103_100509315_100509512_100516095_100516220_100516873
WTC11_00012106	chr10	-	1886	6	NIC	ENSG00000166169.17	novel	2360	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_5	31.1730652968232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101585593	False	1812	-5	True	AGTAAA	-18	NA	101587405	101578881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101587245
WTC11_00012108	chr10	-	869	3	NNC	ENSG00000166169.17	novel	2670	9	NA	NA	2	-445	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	39	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCCAGGCATGGTGGGG	-101586395	True	NA	NA	False	ATTAAA	-23	NA	101588207	101585768	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_101586157_101587245_101587404_101587884
WTC11_00012122	chr10	-	2162	9	NIC	ENSG00000156374.16	novel	2236	10	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	43.3371592862292	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348186	True	NA	-2	True	AATAAA	-17	NA	103351094	103302795	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_103303962_103314185_103314273_103326533_103326633_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
WTC11_00012127	chr10	-	569	4	FSM	ENSG00000214413.9	ENST00000605742.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	42.026446699932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAATTTGTATTGTGAA	-110918896	False	1188	-4	True	AATAAA	-40	NA	110918936	110900217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110918844
WTC11_00012130	chr10	-	3263	6	FSM	ENSG00000169129.15	ENST00000491814.1	3704	6	435	6	435	-6	multi-exon	FALSE	canonical	3	17	junction_4	6.24819974072532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGTTTTCCTCAGT	-114301471	False	NA	-8	True	AATAAA	-11	NA	114301582	114294831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114297101_114297219_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353
WTC11_00012131	chr10	-	687	4	FSM	ENSG00000169129.15	ENST00000486300.1	848	4	161	0	161	0	multi-exon	FALSE	canonical	3	17	junction_3	6.0184900284226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGACTCAGGCCCAGGT	-114304861	True	NA	NA	False	NA	NA	NA	114304972	114300515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114300691_114301353_114301466_114302338_114302485_114304718
WTC11_00012137	chr10	-	2639	8	NNC	ENSG00000165669.14	novel	1000	9	NA	NA	2725	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	107.113900849059	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTCAGTCTTTCTTT	-118334662	False	NA	1	True	CATAAA	-21	NA	118339021	118310719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118337229
WTC11_00012145	chr10	-	4833	11	FSM	ENSG00000107669.19	ENST00000687583.1	4828	11	4	-9	0	1	multi-exon	FALSE	canonical	1	4	junction_9	64.4841841074228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGGTGGTCATTAC	-121924527	True	NA	-4	True	AATAAA	-18	NA	121928031	121740422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121924265_121924330_121927843
WTC11_00012146	chr10	-	2130	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	-5	0	5	multi-exon	FALSE	canonical	1	2	junction_7	7.97188938760212	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCGGTGTGTTTCATT	NA	False	NA	-5	True	AATAAA	-41	NA	122846175	122832152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
WTC11_00012148	chr10	-	1557	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	39	6360	39	-4658	5prime_fragment	FALSE	canonical	3	89	junction_1	7.29725975966321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTAGTTTACAAGC	-122952748	True	NA	-16	True	ATTAAA	-20	NA	122954188	122937260	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
WTC11_00012161	chr10	-	4052	18	FSM	ENSG00000130640.15	ENST00000682990.1	4052	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.7049261007167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133282107_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
WTC11_00012173	chr10	+	2906	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCTGTGTTCTTTG	68775714	False	NA	3	True	AATAAA	-23	NA	68775740	68778646	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_68775700_68778600
WTC11_00012175	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	35.9536738966502	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	206859	True	NA	17	True	AATAAA	-20	NA	207707	215113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
WTC11_00012186	chr11	+	1609	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	-20	0	-10	0	multi-exon	FALSE	canonical	3	1063	junction_10	81.4876865272021	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	225284	True	NA	19	True	AATAAA	-19	NA	236955	252984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
WTC11_00012187	chr11	+	1612	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	-21	0	-10	0	multi-exon	FALSE	canonical	3	10	junction_1	355.170508347751	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225284	True	NA	16	True	AATAAA	-16	NA	236955	252981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
WTC11_00012189	chr11	+	1656	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	-24	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_9	80.6429740039289	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	225304	True	NA	1	True	AATAAA	-1	NA	236975	252966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
WTC11_00012191	chr11	+	1501	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	-12	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	322.619623531495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225354	True	NA	16	True	AATAAA	-16	NA	237025	252981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
WTC11_00012195	chr11	+	4439	11	FSM	ENSG00000142102.16	ENST00000474221.5	4418	11	-21	0	-12	0	multi-exon	FALSE	canonical	3	29	junction_1	64.5948140333262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	285553	True	NA	15	True	ATTAAA	-24	NA	289113	295678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389_290601_290677_292096_292545_292678_292885_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00012196	chr11	+	3718	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	-19	0	-19	0	multi-exon	FALSE	canonical	3	29	junction_1	58.7596649484327	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	285546	True	NA	NA	False	NA	NA	NA	289106	296107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00012197	chr11	+	745	3	FSM	ENSG00000142102.16	ENST00000529087.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCCTGACAGCAGTGG	285617	True	NA	NA	False	NA	NA	NA	289177	290800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389
WTC11_00012198	chr11	+	2879	8	FSM	ENSG00000142102.16	ENST00000476372.1	2879	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	38.97880114595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGAGCCGCTGTGCTT	291543	False	NA	20	True	ATTAAA	-29	NA	291559	295683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_292096_292545_292678_292885_292998_293162_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00012201	chr11	+	801	2	FSM	ENSG00000185201.18	ENST00000616316.3	1006	2	205	0	-85	0	multi-exon	FALSE	canonical	3	1446	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	NA	False	NA	29	True	AATAAA	-18	NA	308020	309395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_308439_309012
WTC11_00012202	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9849	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	299285	False	NA	-7	True	NA	NA	NA	313526	315240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_313692_313996_314357_314921
WTC11_00012203	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236442	True	NA	24	True	AATAAA	-16	NA	314039	315271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314926
WTC11_00012204	chr11	+	3593	2	FSM	ENSG00000185885.17	ENST00000408968.4	668	2	0	-2925	0	2925	multi-exon	FALSE	canonical	3	19705	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTGCCCCGATGCGA	236442	True	NA	NA	False	NA	NA	NA	314039	318197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314921
WTC11_00012205	chr11	+	3750	20	FSM	ENSG00000182272.12	ENST00000329962.11	3750	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	42.3124507716666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	367229	True	NA	26	True	AATGAA	-25	NA	369498	382117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_369955_372108_372213_372661_372755_372851_372948_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
WTC11_00012206	chr11	+	392	3	FSM	ENSG00000182272.12	ENST00000530717.1	409	3	0	17	0	-17	multi-exon	FALSE	canonical	3	66	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGGGGCTGGGGCGGGGG	369709	False	NA	NA	False	NA	NA	NA	369795	372790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_369955_372108_372213_372661
WTC11_00012211	chr11	+	2887	13	FSM	ENSG00000184363.10	ENST00000331563.7	2817	13	-70	0	-6	0	multi-exon	TRUE	canonical	3	117	junction_6	14.1882189000436	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	392643	True	NA	22	True	AATAAA	-19	NA	394138	404908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
WTC11_00012212	chr11	+	2742	14	NIC	ENSG00000184363.10	novel	2817	13	NA	NA	-6	0	intron_retention	TRUE	canonical	3	35	junction_1	31.0833961270788	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	392643	True	NA	22	True	AATAAA	-19	NA	394138	404908	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_394184_394328_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
WTC11_00012214	chr11	+	294	2	FSM	ENSG00000184363.10	ENST00000524646.1	312	2	0	18	0	-18	multi-exon	FALSE	canonical	3	138	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCAAGCTGACTGGGTA	395876	False	NA	NA	False	NA	NA	NA	397371	397758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_397446_397538
WTC11_00012217	chr11	+	2464	12	FSM	ENSG00000174915.12	ENST00000308020.6	2458	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	231	junction_10	17.2483080976484	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	445916	True	NA	37	True	AATAAA	-39	NA	450272	491399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
WTC11_00012218	chr11	+	2885	12	FSM	ENSG00000174915.12	ENST00000526878.5	3134	12	249	0	249	0	multi-exon	FALSE	canonical	3	30	junction_11	63.9422518390456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	458908	False	NA	37	True	AATAAA	-39	NA	458922	491399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419_490643_491120
WTC11_00012222	chr11	+	527	3	FSM	ENSG00000254815.6	ENST00000527113.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	NA	False	NA	10	True	ATTAAA	-14	NA	558891	560106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_558935_559320_559477_559778
WTC11_00012224	chr11	+	1733	4	FSM	ENSG00000099849.15	ENST00000397582.7	1731	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	330	junction_1	76.5419275081747	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCTTGAGTGTGTG	557316	True	NA	-1	True	AATAAA	-6	NA	560953	564012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561034_561761_561893_562078_562777_563188
WTC11_00012225	chr11	+	1970	6	FSM	ENSG00000099849.15	ENST00000397583.8	2017	6	2	45	1	0	multi-exon	FALSE	canonical	1	17	junction_1	212.52613956876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557334	True	NA	-33	True	NA	NA	NA	560971	563980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563395_563479_563557
WTC11_00012227	chr11	+	1409	5	FSM	ENSG00000099849.15	ENST00000454668.2	1450	5	0	41	0	0	multi-exon	FALSE	canonical	1	17	junction_1	220.436498792736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557812	False	NA	-33	True	NA	NA	NA	561449	563980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563557
WTC11_00012230	chr11	+	5783	18	NIC	ENSG00000070047.13	novel	5539	18	NA	NA	-247	0	combination_of_known_junctions	TRUE	canonical	3	44	junction_2	53.8102523000511	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	NA	False	NA	5	True	NA	NA	NA	576222	612222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_576593_581491_581607_581964_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
WTC11_00012231	chr11	+	5278	18	FSM	ENSG00000070047.13	ENST00000416188.3	5278	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	60.1838015199931	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTCACAGTTGAAA	NA	False	NA	-27	True	NA	NA	NA	576469	611964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605607_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
WTC11_00012232	chr11	+	5539	18	FSM	ENSG00000070047.13	ENST00000264555.10	5539	18	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	41.4630364421548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	NA	False	NA	5	True	NA	NA	NA	576469	612222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
WTC11_00012233	chr11	+	5224	18	FSM	ENSG00000070047.13	ENST00000413872.6	5224	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	68.6252044450223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTCACAGTTGAAA	573610	True	NA	-27	True	NA	NA	NA	576520	611964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581964_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605607_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
WTC11_00012234	chr11	+	6749	15	NNC	ENSG00000070047.13	novel	5539	18	NA	NA	9164	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	64.3241551734301	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	585667	False	NA	5	True	NA	NA	NA	585684	612222	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601696_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
WTC11_00012236	chr11	+	1032	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_1	54.872215191297	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695493	False	NA	26	True	AATAAA	-23	NA	695553	704129	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
WTC11_00012237	chr11	+	1683	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	-260	0	-35	0	multi-exon	FALSE	canonical	3	158	junction_1	52.4928566568824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695495	False	NA	26	True	AATAAA	-23	NA	695555	704129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
WTC11_00012238	chr11	+	1572	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	118.014829576626	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695582	False	NA	26	True	AATAAA	-23	NA	695642	704129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
WTC11_00012239	chr11	+	1142	4	FSM	ENSG00000177042.16	ENST00000488769.2	669	4	-251	-222	-37	222	multi-exon	FALSE	canonical	3	158	junction_1	57.4475606289964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAATTTTGTTTTGTTTT	695493	False	NA	NA	False	NA	NA	NA	695553	701349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695847_698868_698889_700141_700236_700614
WTC11_00012240	chr11	+	1082	1	NIC	ENSG00000177042.16	novel	800	4	NA	NA	35	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTCTCCTAATTATG	703026	False	NA	20	True	AATAAA	-17	NA	703041	704123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_703000_704100
WTC11_00012241	chr11	+	3135	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	-174	69	-60	0	multi-exon	TRUE	canonical	3	61	junction_12	67.0004477596978	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCCTACAGATGAGAGG	706044	True	NA	-52	True	NA	NA	NA	706056	727658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
WTC11_00012245	chr11	+	2233	13	FSM	ENSG00000177106.17	ENST00000528770.5	2233	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.5269306182891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCGTGTGTCTCAGTT	720989	False	NA	13	True	ATTAAA	-16	NA	721074	727723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_721207_721284_721353_721564_721692_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
WTC11_00012247	chr11	+	2304	9	FSM	ENSG00000177106.17	ENST00000531393.5	2304	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	78.700381193486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCCGTGTGTCTCAG	721840	False	NA	11	True	ATTAAA	-14	NA	721925	727721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
WTC11_00012250	chr11	+	750	3	FSM	ENSG00000177106.17	ENST00000534679.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGAGGCACAACGCC	725958	False	NA	84	True	NA	NA	NA	726080	727113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_726485_726618_726752_726900
WTC11_00012252	chr11	+	1320	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	-77	-12	-64	12	multi-exon	FALSE	canonical	0	0	junction_6	728.903481754811	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTCTCCGTCCCCTT	747338	False	NA	30	True	ATTAAA	-27	NA	747350	765024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
WTC11_00012255	chr11	+	1209	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	-10	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	95.2401904531434	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713359	True	NA	18	True	ATTAAA	-15	NA	747453	765012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
WTC11_00012257	chr11	+	771	2	FSM	ENSG00000255284.3	ENST00000655766.1	717	2	-38	-16	-30	16	multi-exon	FALSE	canonical	3	21	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTGAAACCCCGTCTC	776163	True	NA	NA	False	NA	NA	NA	777543	778731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_778112
WTC11_00012258	chr11	+	1139	1	FSM	ENSG00000279672.2	ENST00000623846.1	1139	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCTCGAAGTCCATGG	778236	False	NA	NA	False	NA	NA	NA	779616	780755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_779600_780800
WTC11_00012259	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	7240	junction_1	999.696078815957	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	675407	True	NA	28	True	AATAAA	-18	NA	809966	812876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
WTC11_00012260	chr11	+	654	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	-17	0	0	0	multi-exon	FALSE	canonical	3	7720	junction_3	816.163518474631	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	675407	True	NA	26	True	AATAAA	-16	NA	809966	812874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_810358_811596_811646_812534_812634_812759
WTC11_00012263	chr11	+	488	3	FSM	ENSG00000177600.9	ENST00000525722.1	489	3	0	1	0	0	multi-exon	FALSE	canonical	3	7720	junction_2	890.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	811358	False	NA	26	True	AATAAA	-16	NA	811371	812874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_811646_812534_812634_812759
WTC11_00012264	chr11	+	2009	9	ISM	ENSG00000177666.17	ENST00000336615.9	2416	10	667	355	667	0	3prime_fragment	FALSE	canonical	3	114	junction_2	11.2465272417756	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCACTTTGTGTGT	813151	True	NA	14	True	AATAAA	-14	NA	819580	825218	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_819906_821627_821861_821957_822024_822396_822607_823526_823588_823693_823856_823997_824131_824313_824437_824522
WTC11_00012265	chr11	+	2726	6	FSM	ENSG00000177666.17	ENST00000525250.5	2726	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	12.8592379245428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCACTTTGTGTGTA	820816	False	NA	15	True	AATAAA	-15	NA	820834	825219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_821861_821957_822024_822396_822607_823526_824131_824313_824437_824522
WTC11_00012266	chr11	+	1996	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	148.488017557056	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	826570	True	NA	5	True	AATAAA	-15	NA	827288	831986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828259_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
WTC11_00012267	chr11	+	1908	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	49	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	150.477757677191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCGTCCTCCTGGGCCT	827500	False	NA	3	True	AATAAA	-13	NA	827626	831984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827712_828259_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
WTC11_00012269	chr11	+	2450	2	FSM	ENSG00000177685.17	ENST00000528694.1	2440	2	-10	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	829170	False	NA	4	True	AATAAA	-14	NA	829296	831985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_831296_831534
WTC11_00012270	chr11	+	1736	5	FSM	ENSG00000177685.17	ENST00000527763.5	1728	5	-8	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	180.944742946569	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	829170	False	NA	4	True	AATAAA	-14	NA	829296	831985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_829541_829985_830133_830249_830714_830865_831296_831534
WTC11_00012271	chr11	+	714	4	FSM	ENSG00000177685.17	ENST00000526531.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	123.060960503321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACTCAGGATGCAGGCT	827670	True	NA	NA	False	NA	NA	NA	830484	831780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_830714_830865_831033_831223_831296_831534
WTC11_00012272	chr11	+	749	3	ISM	ENSG00000177685.17	ENST00000450448.5	1663	8	2228	6	3	0	3prime_fragment	FALSE	canonical	3	140	junction_1	184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	827673	True	NA	4	True	AATAAA	-14	NA	830487	831985	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_830714_831223_831296_831534
WTC11_00012273	chr11	+	1648	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	-166	4	-101	0	multi-exon	FALSE	canonical	3	109	junction_1	111.882226707647	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACGAGCTCGCTGTGCT	832635	False	NA	6	True	AATAAA	-15	NA	832785	838830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
WTC11_00012274	chr11	+	1707	9	FSM	ENSG00000177697.19	ENST00000322008.9	1545	9	-166	4	-101	0	multi-exon	FALSE	canonical	3	26	junction_1	135.269176089751	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	832635	False	NA	7	True	AATAAA	-16	NA	832785	838831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833023_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
WTC11_00012276	chr11	+	1830	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	-286	1	-221	0	multi-exon	TRUE	canonical	3	190	junction_1	88.9634756515279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACGAGCTCGCTGTGCT	829851	False	NA	6	True	AATAAA	-15	NA	832665	838830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
WTC11_00012279	chr11	+	1344	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	-12	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	276.127669377624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	842793	True	NA	19	True	AATAAA	-19	NA	842811	867116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012280	chr11	+	1399	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	-20	0	8	0	multi-exon	FALSE	canonical	3	238	junction_1	168.67850337254	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838818	True	NA	14	True	AATAAA	-14	NA	842831	867111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012281	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	217.460341211909	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	838927	True	NA	19	True	AATAAA	-19	NA	842940	867116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012282	chr11	+	1547	9	NNC	ENSG00000214063.12	novel	1430	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	218.402116232879	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	842793	True	NA	12	True	AATAAA	-12	NA	842811	867109	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_843046_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012284	chr11	+	1428	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	-9	7	-9	0	multi-exon	FALSE	canonical	3	24	junction_1	235.108485597607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	844006	False	NA	12	True	AATAAA	-12	NA	844071	867109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012286	chr11	+	1626	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	-171	7	122	0	multi-exon	FALSE	canonical	0	0	junction_1	242.711763208955	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	844209	False	NA	12	True	AATAAA	-12	NA	844274	867109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012290	chr11	+	2205	5	FSM	ENSG00000214063.12	ENST00000464987.5	2205	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	302.111734297097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	846939	False	NA	12	True	AATAAA	-12	NA	847196	867109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_847301_850287_850368_864436_865826_865917_866002_866561
WTC11_00012292	chr11	+	1676	7	FSM	ENSG00000214063.12	ENST00000527644.2	1687	7	11	0	11	0	multi-exon	FALSE	canonical	3	691	junction_2	33.1934565171444	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	847042	True	NA	14	True	AATAAA	-14	NA	849826	867111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00012294	chr11	+	2187	4	FSM	ENSG00000214063.12	ENST00000494815.1	2187	4	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_3	30.6195289897731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	863258	False	NA	14	True	AATAAA	-14	NA	863271	867111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_864512_865512_865826_865917_866002_866561
WTC11_00012295	chr11	+	4589	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	-2	0	-2	0	multi-exon	FALSE	canonical	2	112	junction_17	26.4050946777949	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	918459	True	NA	9	True	AATAAA	-14	NA	925867	1012240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
WTC11_00012296	chr11	+	4665	22	FSM	ENSG00000183020.15	ENST00000332231.9	4656	22	-14	5	-14	0	multi-exon	FALSE	canonical	2	44	junction_7	36.3168844998197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	NA	False	NA	9	True	AATAAA	-14	NA	925794	1012240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
WTC11_00012297	chr11	+	3072	21	FSM	ENSG00000183020.15	ENST00000528815.5	3072	21	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_14	45.2906171298206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCGTGAACGTGGCG	918491	True	NA	29	True	ATTAAA	-11	NA	925899	1010919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
WTC11_00012300	chr11	+	3175	21	FSM	ENSG00000174672.16	ENST00000529433.5	3211	21	36	0	3	0	multi-exon	FALSE	canonical	3	58	junction_12	18.969449122207	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCTGCAAGATATTTT	1387992	True	NA	-9	True	TTTAAA	-1	NA	1389936	1461714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
WTC11_00012301	chr11	+	4058	22	NNC	ENSG00000174672.16	novel	3211	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_14	36.0787121359363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTCTTGGTGGTTT	1387993	True	NA	6	True	TATAAA	-1	NA	1389937	1461740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_1390376_1436039_1436135_1438305_1438396_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450220_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460547
WTC11_00012302	chr11	+	4051	20	FSM	ENSG00000174672.16	ENST00000308219.13	4089	20	38	0	3	0	multi-exon	FALSE	canonical	3	39	junction_18	22.5280373173954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	1387992	True	NA	6	True	AATAAA	-14	NA	1389936	1462685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1459191_1459240_1460969
WTC11_00012304	chr11	+	1934	17	FSM	ENSG00000174672.16	ENST00000529951.5	1934	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	30.4220314903525	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCGTGGGAGGAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	1440798	1461136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
WTC11_00012305	chr11	+	1842	8	FSM	ENSG00000174672.16	ENST00000544817.5	1842	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	20.457023144103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAATGAAAAAATTGAA	1450642	False	NA	NA	False	NA	NA	NA	1450657	1462087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
WTC11_00012307	chr11	+	642	6	FSM	ENSG00000214026.11	ENST00000381519.5	643	6	-8	9	-8	0	multi-exon	TRUE	canonical	0	0	junction_5	598.159042395917	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGAAGCTCTGCTTCC	1928308	True	NA	15	True	AATAAA	-20	NA	1947269	1956600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255_1956449_1956541
WTC11_00012308	chr11	+	673	5	FSM	ENSG00000214026.11	ENST00000397298.8	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_4	247.185658969124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGAAGCTCTGCTTCC	1928370	True	NA	15	True	AATAAA	-20	NA	1947331	1956600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255
WTC11_00012309	chr11	+	658	5	FSM	ENSG00000214026.11	ENST00000462288.5	659	5	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	667.868811968339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCTTCCTTCTTCTC	1928592	False	NA	23	True	AATAAA	-28	NA	1947553	1956608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947579_1950898_1951022_1952126_1952210_1952781_1952856_1956255
WTC11_00012312	chr11	+	1483	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	1233	junction_1	133.55225225219	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	2371669	True	NA	30	True	AATAAA	-22	NA	2377308	2397397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
WTC11_00012315	chr11	+	1438	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	105	1	-35	1	multi-exon	FALSE	canonical	3	58	junction_3	103.704708989836	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTCTATCTGGGCC	2400538	False	NA	14	True	AATAAA	-20	NA	2400592	2403877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
WTC11_00012316	chr11	+	3053	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1583	-427	29	0	intron_retention	FALSE	canonical	3	37	junction_1	137.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2400492	False	NA	12	True	AATAAA	-18	NA	2400516	2403875	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_2402148_2402293_2402451_2402610
WTC11_00012318	chr11	+	1761	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	-290	1	-28	0	multi-exon	FALSE	canonical	3	188	junction_1	62	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2400435	False	NA	12	True	AATAAA	-18	NA	2400459	2403875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2400799_2402293_2402451_2402610
WTC11_00012319	chr11	+	979	3	FSM	ENSG00000184281.15	ENST00000485682.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	154.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCACACCAGCATGAGT	2397927	False	NA	NA	False	NA	NA	NA	2401017	2402964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2401486_2402293_2402451_2402610
WTC11_00012320	chr11	+	2562	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	-1284	-427	53	0	multi-exon	FALSE	canonical	3	37	junction_1	124.980887427727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2397725	True	NA	12	True	AATAAA	-18	NA	2400815	2403875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
WTC11_00012321	chr11	+	1568	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	-145	0	12	0	multi-exon	FALSE	canonical	3	312	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2399057	False	NA	12	True	AATAAA	-18	NA	2402147	2403875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2402451_2402610
WTC11_00012322	chr11	+	1567	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	-43	19	-43	0	multi-exon	TRUE	canonical	3	51	junction_3	12.5857061780418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	2901557	True	NA	-11	True	AATAAA	-2	NA	2902234	2925227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
WTC11_00012326	chr11	+	2787	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	8	1125	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	37.1561083657706	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTTTTCATGTCTGATT	3374673	True	NA	20	True	AAGAAA	-17	NA	3380968	3410106	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
WTC11_00012327	chr11	+	2612	7	NIC	ENSG00000223756.8	novel	674	6	NA	NA	0	1063	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	34.404457075598	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTGGTAT	3374697	True	NA	18	True	AATAAA	-18	NA	3380992	3399153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3393085_3393160_3395712_3395889_3397116
WTC11_00012328	chr11	+	1617	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_11	42.5528266458946	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3374697	True	NA	14	True	AATGAA	-18	NA	3380992	3408978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406498_3406698_3407621_3407698_3408685
WTC11_00012329	chr11	+	1666	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	-5	4	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	37.0347997009419	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTCTGATTTCTTT	3374677	True	NA	21	True	AATGAA	-25	NA	3380972	3408985	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
WTC11_00012330	chr11	+	203	1	FSM	ENSG00000255522.1	ENST00000531775.1	189	1	114	-128	114	128	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCACGATCTCAGTTCA	NA	False	NA	NA	False	NA	NA	NA	3531533	3531736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3531500_3531700
WTC11_00012331	chr11	+	1947	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	-301	-752	3	0	multi-exon	FALSE	canonical	2	12	junction_1	85.7997668994503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3808256	False	NA	-4	True	NA	NA	NA	3808292	3826330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
WTC11_00012332	chr11	+	2091	7	NIC	ENSG00000148985.20	novel	1798	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	75.3231925328005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3808256	False	NA	-4	True	NA	NA	NA	3808292	3826330	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3811249_3811425_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00012333	chr11	+	2189	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	-267	41	3	0	multi-exon	FALSE	canonical	1	4	junction_2	79.4138247130533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3808256	False	NA	-4	True	NA	NA	NA	3808292	3826330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00012334	chr11	+	654	3	FSM	ENSG00000148985.20	ENST00000525937.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCTTCTCGGCGCTG	3805406	True	NA	NA	False	NA	NA	NA	3808540	3825068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3823882_3824377_3825019
WTC11_00012335	chr11	+	1583	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	-53	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53.1718910703766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3805406	True	NA	-4	True	NA	NA	NA	3808540	3826330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00012339	chr11	+	1783	7	NIC	ENSG00000148985.20	novel	894	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	83.3614952414416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805441	True	NA	18	True	AATAAA	-18	NA	3808575	3826352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3822908_3822994_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00012343	chr11	+	2716	10	ISM	ENSG00000167323.12_ENSG00000229368.1	ENST00000527651.5	2184	13	-1008	8155	-490	-11	5prime_fragment	FALSE	canonical	3	39	junction_4	5.38401841759365	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGGTTATTTCTTTA	3854683	True	NA	NA	False	AATAAA	-8	NA	3855173	4083643	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262
WTC11_00012344	chr11	+	4371	13	Fusion	ENSG00000167323.12_ENSG00000229368.1	novel	4168	13	NA	NA	-490	0	multi-exon	TRUE	non_canonical	0	0	junction_1	13.4752860204648	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	3854683	True	NA	19	True	AATAAA	-22	NA	3855173	4093208	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_3855450_3855643_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
WTC11_00012345	chr11	+	4168	13	FSM	ENSG00000167323.12	ENST00000526596.2	4168	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	12.6059399579017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	3855274	True	NA	19	True	AATAAA	-22	NA	3855663	4093208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4084672_4084766_4086476_4086544_4091281
WTC11_00012346	chr11	+	4038	12	FSM	ENSG00000167323.12	ENST00000300737.8	4038	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	5.22391196311223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTTGACTCTCATT	3855312	False	NA	20	True	AATAAA	-23	NA	3855701	4093209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
WTC11_00012348	chr11	+	555	3	FSM	ENSG00000167325.15	ENST00000532710.5	549	3	-6	0	-6	0	multi-exon	FALSE	canonical	1	1	junction_1	422.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTCCCATGGTGGCCA	4094672	True	NA	NA	False	CATAAA	-16	NA	4094700	4107480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4106045_4106224_4107434
WTC11_00012349	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_7	62.2585459451944	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	4083452	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
WTC11_00012350	chr11	+	592	4	FSM	ENSG00000167325.15	ENST00000526350.5	583	4	-9	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	52.550504807809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTTTAATAATGCA	4083496	True	NA	NA	False	AATAAA	-39	NA	4094842	4107570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434
WTC11_00012352	chr11	+	639	4	FSM	ENSG00000167325.15	ENST00000531591.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_3	50.5327176743499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGTCTGTCTCATTTGGT	4121653	False	NA	8	True	AATAAA	-18	NA	4121674	4126949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4121766_4122140_4122221_4123182_4123385_4126683
WTC11_00012353	chr11	+	943	1	FSM	ENSG00000225101.7	ENST00000531655.1	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAATAAGTGGAAAAAG	NA	False	NA	NA	False	AATAGA	-4	NA	4474812	4475755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4474800_4475800
WTC11_00012354	chr11	+	470	5	FSM	ENSG00000121236.21	ENST00000424369.5	468	5	-2	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	93.9743981092723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAAGTATGTTCCGAGC	5592579	True	NA	NA	False	NA	NA	NA	5596107	5610190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5596182_5604533_5604630_5605336_5605568_5608371_5608395_5610144
WTC11_00012355	chr11	+	3222	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5893221772681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592575	True	NA	15	True	AATAAA	-18	NA	5596103	5612952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
WTC11_00012356	chr11	+	3171	8	NNC	ENSG00000121236.21	novel	3217	8	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_3	82.0709001599302	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592623	True	NA	15	True	AATAAA	-18	NA	5596151	5612952	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_5596182_5603245_5603736_5604536_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
WTC11_00012357	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.808991510215	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5596231	True	NA	15	True	AATAAA	-18	NA	5596636	5612952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
WTC11_00012360	chr11	+	2313	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	-20	0	-20	0	multi-exon	FALSE	canonical	2	5	junction_1	3.18157963590287	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	NA	False	NA	15	True	AATAAA	-26	NA	5624980	5644398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
WTC11_00012361	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	62.8915490250917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	5688088	True	NA	11	True	AATAAA	-17	NA	5689789	5710863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
WTC11_00012362	chr11	+	2008	6	FSM	ENSG00000132274.16	ENST00000480395.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	19.4051539545555	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTTTATGGCTGTGCC	5694790	False	NA	NA	False	AATATA	-42	NA	5696491	5709447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5696656_5697247_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
WTC11_00012363	chr11	+	497	2	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATGGCTTGGCTTGGG	NA	False	NA	NA	False	NA	NA	NA	6069741	6075849	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6070158_6075768
WTC11_00012364	chr11	+	299	1	FSM	ENSG00000180919.3	ENST00000316529.3	1152	1	245	608	245	-608	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGGTTCATCATGCTCA	NA	False	NA	NA	False	ACTAAA	-18	NA	6107928	6108227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6107900_6108200
WTC11_00012365	chr11	+	2038	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	-19	0	13	0	multi-exon	FALSE	canonical	3	80	junction_4	10.1365674663566	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	6259019	True	NA	10	True	AATAAA	-21	NA	6259818	6272127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
WTC11_00012366	chr11	+	792	2	FSM	ENSG00000110148.10	ENST00000525014.1	792	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACTGTCGTGCAACCA	6259075	True	NA	NA	False	NA	NA	NA	6259874	6270255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6260080_6269668
WTC11_00012367	chr11	+	893	4	FSM	ENSG00000110148.10	ENST00000525462.1	2138	4	0	1245	0	-332	multi-exon	FALSE	canonical	3	88	junction_2	7.48331477354788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGAAGGTGAGGGTGA	6259126	True	NA	NA	False	NA	NA	NA	6259925	6270882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645
WTC11_00012368	chr11	+	2421	6	FSM	ENSG00000166311.10	ENST00000342245.9	2410	6	-11	0	-10	0	multi-exon	TRUE	canonical	2	8	junction_1	3.91918358845308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTGTGACTGTCCC	6390138	True	NA	8	True	AATAAA	-21	NA	6390462	6394996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6390917_6391383_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
WTC11_00012369	chr11	+	650	3	FSM	ENSG00000166311.10	ENST00000531336.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAACCTGGTATATCG	6392968	False	NA	NA	False	NA	NA	NA	6393292	6394373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6393388_6393616_6393694_6393895
WTC11_00012370	chr11	+	614	2	FSM	ENSG00000132286.12	ENST00000528908.1	593	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	663	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGTTGGTGAATCCTAAA	6475803	True	NA	-96	True	NA	NA	NA	6481479	6482285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6481853_6482044
WTC11_00012371	chr11	+	2812	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	574	junction_1	44.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	6475800	True	NA	24	True	AATAAA	-17	NA	6481476	6484681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6481556_6481756_6481853_6482044
WTC11_00012373	chr11	+	4909	12	NIC	ENSG00000283977.1	novel	595	5	NA	NA	15029	25420	intron_retention	FALSE	canonical	3	16	junction_6	8.99954085146515	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAGGCAAACAAGTG	NA	False	NA	NA	False	GGGGCT	-10	NA	6496529	6534398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6498962_6502752_6502927_6508879_6509084_6509161_6509273_6511272_6511430_6519599_6519855_6519964_6520103_6520237_6520290_6528521_6528788_6528877_6529122_6533026_6533185_6533680
WTC11_00012374	chr11	+	1596	5	FSM	ENSG00000179532.13	ENST00000472080.1	2288	5	667	25	667	-25	multi-exon	FALSE	canonical	3	16	junction_4	5.95818764390649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCACAAATAAAATCATTA	NA	False	NA	NA	False	NA	NA	NA	6508879	6520833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6509084_6509161_6509273_6511272_6511430_6519599_6519855_6519964
WTC11_00012376	chr11	+	1706	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	-14	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	179.22539735081	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	6592001	True	NA	-24	True	NA	NA	NA	6603743	6610833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
WTC11_00012377	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	185.932450188389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	6592001	True	NA	-22	True	NA	NA	NA	6603743	6610835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
WTC11_00012379	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	265.313598512318	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592031	True	NA	13	True	AATAAA	-15	NA	6603773	6610870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
WTC11_00012380	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_5	80.3255771663512	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592073	True	NA	13	True	AATAAA	-15	NA	6603815	6610870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
WTC11_00012385	chr11	+	3665	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	-10	0	-7	0	multi-exon	FALSE	canonical	3	72	junction_6	9.14087280053473	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	6924681	True	NA	9	True	ATTAAA	-16	NA	6926415	6958047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
WTC11_00012386	chr11	+	1510	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	7	junction_7	29.357055960942	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	6924681	True	NA	NA	False	NA	NA	NA	6926415	6984238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
WTC11_00012389	chr11	+	3367	7	NIC	ENSG00000149054.16	novel	3655	7	NA	NA	33	-3	intron_retention	FALSE	canonical	3	21	junction_1	26.6234024038168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCTTCTGTAAAC	6924820	True	NA	9	True	ATTAAA	-23	NA	6926554	6957845	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6926729_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
WTC11_00012391	chr11	+	3457	7	NIC	ENSG00000149054.16	novel	3655	7	NA	NA	71	-8	intron_retention	FALSE	canonical	2	6	junction_1	31.9513519101914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAACTGTGTCTTCTG	6924858	True	NA	4	True	ATTAAA	-18	NA	6926592	6957840	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6926862_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
WTC11_00012393	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	7.35129838203438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7513575	True	NA	14	True	AATAAA	-20	NA	7513998	7653756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
WTC11_00012394	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_2	87.7282445849635	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	7944180	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
WTC11_00012395	chr11	+	1795	7	FSM	ENSG00000175390.15	ENST00000531572.2	1784	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	1943	junction_2	83.3001600638718	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAACGGAGCCTACCT	7944169	True	NA	-33	True	NA	NA	NA	7987325	7996139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
WTC11_00012396	chr11	+	1925	7	FSM	ENSG00000175390.15	ENST00000640290.2	1914	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	20	junction_2	784.275249301332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTACCTTTTGTAAATT	7944169	True	NA	-23	True	AATAAA	-3	NA	7987325	7996149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
WTC11_00012397	chr11	+	4326	8	FSM	ENSG00000175390.15	ENST00000678132.1	4308	8	-18	0	-11	0	multi-exon	FALSE	canonical	3	20	junction_2	742.242630444371	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACGCACCTG	7944169	True	NA	NA	False	AATACA	-12	NA	7987325	7999127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
WTC11_00012398	chr11	+	8015	6	FSM	ENSG00000175390.15	ENST00000677179.1	8434	6	419	0	178	0	multi-exon	FALSE	canonical	3	2061	junction_2	66.6591329076519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTACTAAAAAAAAACAAAA	7987672	False	NA	NA	False	NA	NA	NA	7987775	7999090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
WTC11_00012399	chr11	+	6476	12	FSM	ENSG00000166402.9	ENST00000299506.3	6445	12	-31	0	-31	0	multi-exon	FALSE	canonical	2	10	junction_5	3.31288493787065	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTACTTTTTTCAT	8077948	True	NA	21	True	ATTAAA	-18	NA	8081179	8106243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8081549_8089609_8089662_8090068_8090232_8094045_8094190_8095497_8095666_8096684_8096807_8097227_8097426_8097713_8097827_8098757_8098876_8100502_8100602_8100825_8100998_8101485
WTC11_00012400	chr11	+	639	6	NNC	ENSG00000166441.13	novel	651	5	NA	NA	-94	8295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2865.79185566573	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTAGAGCCAGTGTGGCA	8682682	False	NA	NA	False	AAAAAG	-1	NA	8682693	8698167	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8685846_8698134
WTC11_00012401	chr11	+	640	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-94	8295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2865.79185566573	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTAGAGCCAGTGTGGCA	8682682	False	NA	NA	False	AAAAAG	-1	NA	8682693	8698167	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8685847_8698134
WTC11_00012404	chr11	+	655	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	-4	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2907.68662341732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	8497295	True	NA	26	True	ATTAAA	-14	NA	8682787	8685845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
WTC11_00012405	chr11	+	900	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	-22	0	0	0	multi-exon	FALSE	canonical	3	6695	junction_3	379.545634790981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497295	True	NA	29	True	ATTAAA	-17	NA	8682787	8685848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
WTC11_00012406	chr11	+	410	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	-4	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2909.52354346893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497295	True	NA	29	True	ATTAAA	-17	NA	8682787	8685848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
WTC11_00012407	chr11	+	4526	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	-4	13	0	-13	multi-exon	FALSE	canonical	3	4085	junction_1	1400.79093729221	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAACTGAGCTGTGA	8497295	True	NA	NA	False	TATAAA	-40	NA	8682787	8689859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
WTC11_00012408	chr11	+	298	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	-1	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8682711	True	NA	29	True	ATTAAA	-17	NA	8683214	8685848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8683266_8684005_8684082_8685677
WTC11_00012409	chr11	+	805	2	FSM	ENSG00000166441.13	ENST00000530913.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	6695	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8683622	False	NA	29	True	ATTAAA	-17	NA	8684258	8685848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8684893_8685677
WTC11_00012410	chr11	+	1261	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	49	junction_1	72.7233628210357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	8911124	8920084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
WTC11_00012413	chr11	+	1131	4	FSM	ENSG00000166452.12	ENST00000525005.5	1128	4	-3	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	53.3249993488566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAACATACACATTTGGTG	8907739	True	NA	NA	False	NA	NA	NA	8911188	8917748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286
WTC11_00012415	chr11	+	1412	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	-149	-179	0	0	multi-exon	FALSE	canonical	3	120	junction_1	47.6188571424762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907739	True	NA	NA	False	AATAAA	-17	NA	8911188	8920079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
WTC11_00012416	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	68.6964336774479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907739	True	NA	NA	False	AATAAA	-17	NA	8911188	8920079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
WTC11_00012417	chr11	+	1456	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	-217	-217	27	0	multi-exon	FALSE	canonical	3	104	junction_1	57.0438427878066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907776	True	NA	NA	False	AATAAA	-17	NA	8911225	8920079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
WTC11_00012418	chr11	+	3330	3	FSM	ENSG00000254860.7	ENST00000534349.1	383	3	-916	-2031	616	2031	multi-exon	FALSE	canonical	2	2	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAAGAGTGACTC	8965644	False	NA	NA	False	AATAAA	-36	NA	8965663	8979558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8966657_8967838_8968042_8977424
WTC11_00012419	chr11	+	6184	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	-22	0	-22	0	multi-exon	TRUE	canonical	0	0	junction_2	69.627269063365	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9374660	True	NA	13	True	AATAAA	-22	NA	9384629	9448127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
WTC11_00012420	chr11	+	562	6	FSM	ENSG00000166478.10	ENST00000532577.5	548	6	-14	0	-5	0	multi-exon	FALSE	canonical	2	16	junction_1	70.0656834691563	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGACACCATCTTGGC	9456731	True	NA	NA	False	NA	NA	NA	9460970	9478472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9461077_9471305_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389
WTC11_00012421	chr11	+	638	6	FSM	ENSG00000166478.10	ENST00000533542.5	627	6	-11	0	-5	0	multi-exon	FALSE	canonical	3	5	junction_2	69.9468369549331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAGCAAGAGAAAAAAAT	9456731	True	NA	NA	False	NA	NA	NA	9460970	9479522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9461077_9471301_9471421_9473940_9474025_9474552_9474634_9478389_9478587_9479471
WTC11_00012423	chr11	+	2938	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	-5	-911	-5	0	multi-exon	FALSE	canonical	3	62	junction_4	32.6187403530888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456731	True	NA	20	True	AATACA	-19	NA	9460970	9528524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
WTC11_00012426	chr11	+	2935	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	-35	0	1	0	multi-exon	FALSE	canonical	3	112	junction_4	22.1305219097969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456737	True	NA	20	True	AATACA	-19	NA	9460976	9528524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
WTC11_00012427	chr11	+	2972	16	NNC	ENSG00000166478.10	novel	502	3	NA	NA	328	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	46.6668571424684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9462307	False	NA	20	True	AATACA	-19	NA	9462329	9528524	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_9462467_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
WTC11_00012429	chr11	+	4991	11	FSM	ENSG00000166483.12	ENST00000450114.7	3588	11	0	-1403	0	1403	multi-exon	FALSE	canonical	3	560	junction_6	49.7975903031462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGGGATTGTGCAAG	9568326	True	NA	NA	False	AATAAA	-17	NA	9573669	9591388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9574510_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
WTC11_00012430	chr11	+	5895	11	FSM	ENSG00000166483.12	ENST00000299613.10	3436	11	-1055	-1404	-38	1403	multi-exon	TRUE	canonical	2	4	junction_1	193.397026864427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGGGATTGTGCAAG	9568288	True	NA	NA	False	AATAAA	-17	NA	9573631	9591388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9575376_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
WTC11_00012435	chr11	+	540	1	FSM	ENSG00000243964.1	ENST00000475608.1	468	1	-14	-58	-14	58	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGATGGAAGTTT	NA	False	NA	NA	False	CATAAA	-4	NA	9606127	9606667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9606100_9606700
WTC11_00012436	chr11	+	613	1	FSM	ENSG00000239470.3	ENST00000472300.1	483	1	-75	-55	-75	55	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-33	NA	9660362	9660975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9660400_9661000
WTC11_00012437	chr11	+	3546	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	-8	0	-8	0	multi-exon	FALSE	canonical	3	26	junction_2	95.0391498278473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	9657784	True	NA	10	True	AATAAA	-19	NA	9664068	9751821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
WTC11_00012438	chr11	+	4892	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	-8	0	-8	0	multi-exon	FALSE	canonical	3	244	junction_11	44.1337186736733	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	9657784	True	NA	50	True	AATAAA	-16	NA	9664068	9752993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
WTC11_00012439	chr11	+	2988	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	18	0	-18	multi-exon	FALSE	canonical	3	256	junction_6	41.182520563948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	9657850	True	NA	NA	False	NA	NA	NA	9664134	9741935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
WTC11_00012440	chr11	+	3683	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	31	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	9758034	True	NA	-29	True	NA	NA	NA	9758298	9811325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9758504_9807847
WTC11_00012441	chr11	+	1603	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	-153	42	-153	0	multi-exon	FALSE	canonical	3	210	junction_3	17.2819751957543	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	10304897	False	NA	-8	True	CATAAA	-5	NA	10304919	10307355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
WTC11_00012443	chr11	+	1900	3	FSM	ENSG00000148926.10	ENST00000528655.5	1889	3	-11	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	4	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	10301041	True	NA	-8	True	CATAAA	-5	NA	10305072	10307355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10305799_10305948_10306099_10306331
WTC11_00012445	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	10301041	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10305230_10305679_10306099_10306331
WTC11_00012447	chr11	+	3810	15	FSM	ENSG00000133805.16	ENST00000396554.7	3806	15	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	4.62303460722412	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTTAAAGATTAATCT	10450665	False	NA	NA	False	NA	NA	NA	10450676	10507018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10451044_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
WTC11_00012448	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_6	28.4696475800691	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	10746932	True	NA	17	True	AATAAA	-18	NA	10751245	10779746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
WTC11_00012451	chr11	+	1153	3	FSM	ENSG00000247271.8	ENST00000664276.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	10858161	False	NA	21	True	AATAAA	-26	NA	10858178	10879278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10858367_10865260_10865328_10878380
WTC11_00012452	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857636	True	NA	15	True	AATAAA	-20	NA	10858216	10879272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10858352_10865260_10865328_10878380
WTC11_00012453	chr11	+	7617	27	FSM	ENSG00000170242.19	ENST00000339865.9	7775	27	158	0	158	0	multi-exon	TRUE	canonical	3	20	junction_1	34.6457132093854	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTGTGTAATTTTT	11841569	False	NA	5	True	AATAAA	-14	NA	11841580	11959323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_11842225_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
WTC11_00012455	chr11	+	12885	29	FSM	ENSG00000170242.19	ENST00000399455.2	7396	29	-94	-5395	0	2831	multi-exon	FALSE	canonical	3	11	junction_1	45.8452782826795	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGGAGCCTGCCCAGGC	11837745	True	NA	NA	False	NA	NA	NA	11841971	11964718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_11842225_11873799_11873860_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
WTC11_00012456	chr11	+	8598	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	-22	51	-14	-51	multi-exon	FALSE	canonical	3	53	junction_4	6.94422221866655	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAATGGCTTTCTGACC	12375637	True	NA	NA	False	NA	NA	NA	12377548	12535305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
WTC11_00012457	chr11	+	9435	13	FSM	ENSG00000187079.20	ENST00000527636.7	9417	13	-18	0	-18	0	multi-exon	FALSE	canonical	3	29	junction_2	16.4384373412506	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	12669730	True	NA	16	True	AATAAA	-21	NA	12674402	12944737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12674835_12675408_12675562_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
WTC11_00012458	chr11	+	3063	11	FSM	ENSG00000187079.20	ENST00000527575.6	3063	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	21.2238073869888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGCAAAACACTAAGCC	12675445	False	NA	NA	False	NA	NA	NA	12675502	12939065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12675562_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12924911_12925053_12930173_12930327_12937108
WTC11_00012460	chr11	+	2655	1	FSM	ENSG00000189431.8	ENST00000529419.3	2804	1	18	131	18	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAAGTTACGCAAAACA	13008975	True	NA	NA	False	AATAAA	-13	NA	13009333	13011988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13009300_13012000
WTC11_00012461	chr11	+	2832	20	FSM	ENSG00000133794.20	ENST00000403290.6	2787	20	-50	5	-12	0	multi-exon	TRUE	canonical	2	14	junction_3	12.640128685484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	13276927	True	NA	NA	False	AATAAA	-16	NA	13277739	13387261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
WTC11_00012462	chr11	+	2820	20	FSM	ENSG00000133794.20	ENST00000401424.6	2807	20	-13	0	13	0	multi-exon	FALSE	canonical	2	8	junction_5	13.6227364126456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	13276952	True	NA	NA	False	AATAAA	-16	NA	13277764	13387261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
WTC11_00012464	chr11	+	2682	19	NIC	ENSG00000133794.20	novel	2854	21	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_15	14.0870310727436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	13277039	True	NA	NA	False	AATAAA	-21	NA	13277851	13387266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378321_13378446_13381160_13381255_13385688_13385792_13386595
WTC11_00012466	chr11	+	5284	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	-18	0	-18	0	multi-exon	TRUE	canonical	3	277	junction_3	22.7396330025555	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	13660785	True	NA	19	True	ATTAAA	-22	NA	13668649	13732346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
WTC11_00012467	chr11	+	7831	3	FSM	ENSG00000197601.13	ENST00000532502.1	5820	3	-1909	-102	-1909	102	multi-exon	FALSE	canonical	3	331	junction_1	6	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAGAAATAAGGATATAA	13717975	False	NA	121	True	NA	NA	NA	13717993	13732448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13721860_13727555_13727684_13728611
WTC11_00012468	chr11	+	5762	16	FSM	ENSG00000262655.4	ENST00000576479.4	5052	16	0	-710	0	710	multi-exon	FALSE	canonical	3	16	junction_3	4.69325757514614	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACGATCTCAGTTCACT	13962385	True	NA	NA	False	NA	NA	NA	13962722	14268843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13963143_13982846_13982954_14041520_14041655_14075344_14075419_14079898_14080022_14135419_14135569_14243331_14243397_14254527_14254730_14255646_14255788_14256616_14256693_14257715_14257899_14259279_14259451_14259533_14259702_14260587_14260753_14262711_14262976_14265523
WTC11_00012470	chr11	+	6186	16	FSM	ENSG00000152270.9	ENST00000282096.9	5995	16	-77	-114	-77	114	multi-exon	FALSE	canonical	3	38	junction_7	7.77574576630578	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAATTCTCTGTATCT	14642522	True	NA	NA	False	AAGAAA	-27	NA	14643726	14872158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_14645054_14771936_14771988_14786436_14786686_14789105_14789243_14803943_14804051_14818182_14818394_14819135_14819210_14830697_14830847_14831639_14831778_14832721_14832834_14834981_14835096_14843826_14844027_14859042_14859247_14861204_14861367_14867505_14867759_14869460
WTC11_00012471	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	6.04152298679729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	15073209	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
WTC11_00012472	chr11	+	662	3	FSM	ENSG00000254946.2	ENST00000659618.1	743	3	59	22	59	-22	multi-exon	FALSE	canonical	3	4	junction_2	4	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAGAAATTAAGAGCA	15561524	False	NA	NA	False	NA	NA	NA	15561877	15604147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_15562229_15585707_15585803_15603931
WTC11_00012473	chr11	+	476	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	-62	161	-48	0	multi-exon	FALSE	canonical	3	30	junction_2	1219.44768918829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGATGACGATGA	NA	False	NA	NA	False	NA	NA	NA	16738595	16754906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
WTC11_00012474	chr11	+	3917	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	12	-9	0	9	multi-exon	FALSE	canonical	3	2316	junction_2	137.175981862715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTACCCTTATTTTC	16699507	True	NA	16	True	AGTAAA	-26	NA	16738658	16758349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
WTC11_00012475	chr11	+	1841	3	FSM	ENSG00000110696.10	ENST00000524461.1	2040	3	199	0	199	0	multi-exon	FALSE	canonical	3	2413	junction_1	132.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAGCATCATCAACCCT	16746791	False	NA	25	True	AATAAA	-22	NA	16746902	16755346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16748158_16752784_16752895_16754870
WTC11_00012476	chr11	+	6968	2	FSM	ENSG00000110696.10	ENST00000531658.1	4258	2	329	-3039	329	46	multi-exon	FALSE	canonical	3	2678	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTACTATGTAAAACTTAT	16749331	False	NA	53	True	NA	NA	NA	16749442	16758386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16752895_16754870
WTC11_00012477	chr11	+	957	1	FSM	ENSG00000184669.10	ENST00000526721.2	1000	1	7	36	7	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATATCTTATTATCTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	17052031	17052988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17052000_17053000
WTC11_00012478	chr11	+	534	4	FSM	ENSG00000070081.18	ENST00000531172.5	514	4	-20	0	-17	0	multi-exon	FALSE	canonical	1	4	junction_2	7.31816613336672	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAGTGCGAAGATAGAA	17275051	True	NA	NA	False	NA	NA	NA	17276713	17295441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17276849_17282788_17282944_17291239_17291366_17295323
WTC11_00012480	chr11	+	557	5	FSM	ENSG00000070081.18	ENST00000533738.6	534	5	-23	0	-13	0	multi-exon	FALSE	canonical	3	23	junction_3	81.2692284939386	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTCAGAGAAAAGCTCCA	17275055	True	NA	-18	True	GATAAA	-1	NA	17276717	17296166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103
WTC11_00012481	chr11	+	1912	13	FSM	ENSG00000070081.18	ENST00000323688.10	1905	13	-7	0	0	0	multi-exon	TRUE	canonical	3	151	junction_7	20.8424979842202	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTTTTTTCCAACA	17275071	True	NA	NA	False	AATAAA	-24	NA	17276733	17331390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901
WTC11_00012482	chr11	+	2300	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	20.0263140502158	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGGGAAGGCAAGAAA	17275076	True	NA	NA	False	NA	NA	NA	17276738	17332211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00012483	chr11	+	1704	13	NNC	ENSG00000070081.18	novel	701	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	69.8754844944444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAATAAAGGGAGATAC	17276944	False	NA	NA	False	AATAAA	-16	NA	17277027	17331525	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_17277298_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17330126_17330298_17330901_17330984_17331411
WTC11_00012486	chr11	+	6250	5	FSM	ENSG00000188211.9	ENST00000338965.9	6364	5	14	100	14	-100	multi-exon	TRUE	canonical	2	2	junction_4	1.08972473588517	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCAGGTAGATGATG	17351754	False	NA	NA	False	NA	NA	NA	17351813	17377241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17352040_17356650_17357002_17367008_17367348_17368866_17368965_17372005
WTC11_00012487	chr11	+	2358	1	FSM	ENSG00000260196.1	ENST00000568280.1	2883	1	-1363	1888	-1363	-1888	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAGAGGAAAGACTACC	NA	False	NA	NA	False	AGTAAA	-4	NA	17379285	17381643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17379300_17381600
WTC11_00012488	chr11	+	3032	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	-20	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	18.61437342376	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	18319840	True	NA	33	True	AGTAAA	-30	NA	18322546	18367045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
WTC11_00012493	chr11	+	2244	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	-3	0	0	0	multi-exon	FALSE	canonical	3	7252	junction_1	852.383453042355	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	18286632	True	NA	NA	False	AATACA	-14	NA	18394559	18408425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
WTC11_00012494	chr11	+	2305	8	FSM	ENSG00000134333.14	ENST00000540430.5	2305	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	3154.34847246056	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCTCATGCCTATA	18396196	False	NA	6	True	ATTAAA	-19	NA	18396265	18408218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
WTC11_00012498	chr11	+	375	1	FSM	ENSG00000279837.1	ENST00000623697.1	768	1	407	-14	407	14	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGCTAATTCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	18602288	18602663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18602300_18602700
WTC11_00012499	chr11	+	309	1	FSM	ENSG00000257043.1	ENST00000537438.1	499	1	333	-143	333	143	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATCAGTGACACAGAGG	NA	False	NA	NA	False	NA	NA	NA	18665382	18665691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18665400_18665700
WTC11_00012500	chr11	+	2297	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	-14	0	-14	0	multi-exon	TRUE	canonical	3	71	junction_1	69.9709145923425	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111236	True	NA	13	True	AATAAA	-16	NA	19117130	19176415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
WTC11_00012501	chr11	+	2429	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	-23	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	52.4782320943646	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111250	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
WTC11_00012502	chr11	+	2319	16	NIC	ENSG00000177054.14	novel	2406	17	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_13	81.6536316127798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111276	True	NA	13	True	AATAAA	-16	NA	19117170	19176415	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19170410_19170569_19172722_19172821_19175821
WTC11_00012503	chr11	+	10715	36	NNC	ENSG00000166833.23	novel	2289	4	NA	NA	-744	0	intron_retention	FALSE	canonical	2	9	junction_7	14.3585571442714	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGGTTTGGCTTGTCTG	19776984	False	NA	15	True	AATAAA	-22	NA	19777057	20121601	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_19777518_19832483_19832602_19842870_19842924_19868924_19868998_19879868_19880128_19892433_19892595_19933175_19934278_19939660_19939774_19946400_19946510_19948690_19949081_19984124_19984248_20035958_20036098_20043980_20044273_20044967_20045671_20048727_20049196_20054079_20054241_20055768_20055958_20062306_20062360_20068185_20068210_20068323_20068399_20077551_20077636_20077992_20078105_20080063_20080210_20083006_20083180_20090864_20091019_20092205_20092369_20093098_20093200_20095671_20095768_20097576_20097746_20100936_20101173_20103254_20103410_20103652_20103725_20105530_20105728_20107663_20107783_20114591_20114796_20118132
WTC11_00012504	chr11	+	684	5	FSM	ENSG00000166833.23	ENST00000534229.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7363568678162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCCTTGCCAACT	19777716	True	NA	NA	False	NA	NA	NA	19777801	19880127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_19777983_19832483_19832602_19842870_19842924_19868924_19868998_19879868
WTC11_00012505	chr11	+	2716	13	FSM	ENSG00000166833.23	ENST00000525322.5	2716	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.18445244239779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAGAAGCGGAAGA	20022621	True	NA	NA	False	NA	NA	NA	20022837	20080184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20023133_20035958_20036098_20043980_20044273_20044967_20045671_20048727_20049196_20054079_20054241_20055768_20055958_20062306_20062360_20068185_20068210_20068323_20068399_20077551_20077636_20077992_20078105_20080063
WTC11_00012506	chr11	+	544	4	FSM	ENSG00000166833.23	ENST00000526675.1	607	4	63	0	63	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2968437932844	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAAGGCTTTCTCCTA	20027599	False	NA	NA	False	AAAACA	-21	NA	20027616	20044995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20027702_20035958_20036098_20043980_20044273_20044967
WTC11_00012507	chr11	+	969	4	FSM	ENSG00000166833.23	ENST00000533746.1	2289	4	1320	0	1320	0	multi-exon	FALSE	canonical	3	54	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAGAAAAAAAAAAAGAG	20105520	False	NA	NA	False	AATGAA	-10	NA	20105530	20118581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20105728_20107663_20107783_20114591_20114796_20118132
WTC11_00012508	chr11	+	627	2	FSM	ENSG00000166833.23	ENST00000525025.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCCTGCTGCAGTTAC	20107228	False	NA	NA	False	NA	NA	NA	20107244	20114680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20107783_20114591
WTC11_00012509	chr11	+	700	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	13	0	13	0	multi-exon	FALSE	canonical	3	161	junction_1	175	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	20359580	True	NA	-25	True	AGTAAA	-36	NA	20363697	20367625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363750_20364236_20364433_20367173
WTC11_00012510	chr11	+	1353	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	-23	-444	-14	0	multi-exon	FALSE	canonical	3	161	junction_1	142.343247117663	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTGCCTCTTAGAT	20359582	True	NA	11	True	AATAAA	-22	NA	20363699	20383778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
WTC11_00012511	chr11	+	1846	5	FSM	ENSG00000109854.14	ENST00000451739.7	1830	5	-16	0	13	0	multi-exon	FALSE	canonical	3	488	junction_4	17.2970373185699	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	20359580	True	NA	15	True	AATAAA	-26	NA	20363697	20383782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
WTC11_00012512	chr11	+	1377	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	-410	0	0	multi-exon	FALSE	canonical	3	63	junction_1	181.361076309113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTGCCTCTTAGAT	20359607	True	NA	11	True	AATAAA	-22	NA	20363724	20383778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
WTC11_00012513	chr11	+	1518	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	-45	4	13	0	multi-exon	FALSE	canonical	3	240	junction_1	110.983602392426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTGCCTCTTAGAT	20359580	True	NA	11	True	AATAAA	-22	NA	20363697	20383778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
WTC11_00012515	chr11	+	2541	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	-11	0	-11	0	multi-exon	FALSE	canonical	3	15	junction_1	98.57787246018	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	NA	False	NA	30	True	AATAAA	-43	NA	20387546	20509294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
WTC11_00012516	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	24.3826896702467	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	20386621	True	NA	74	True	AATAAA	-19	NA	20387715	20509338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
WTC11_00012517	chr11	+	532	3	FSM	ENSG00000185238.13	ENST00000526583.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAGGTAAGTTGACA	20386652	False	NA	NA	False	AATAAA	-8	NA	20387746	20392251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20388155_20389743_20389827_20392210
WTC11_00012518	chr11	+	3051	20	FSM	ENSG00000165973.19	ENST00000357134.10	3235	20	19	165	19	-160	multi-exon	TRUE	canonical	0	0	junction_2	4.32092121089975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTCCAGTCGCATTA	20669499	True	NA	NA	False	NA	NA	NA	20669604	21575521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20669779_20677931_20678061_20783679_20783831_20847582_20847754_20885443_20885541_20918181_20918255_20919251_20919335_20927307_20927443_20928376_20928480_20937785_20937860_20947335_20947436_20960431_20960561_21113588_21113715_21229331_21229455_21370852_21370949_21534373_21534515_21560188_21560383_21570763_21570941_21573184_21573410_21574971
WTC11_00012519	chr11	+	6841	21	FSM	ENSG00000171714.13	ENST00000682341.1	6739	21	-102	0	-102	0	multi-exon	FALSE	canonical	3	21	junction_7	10.158124826955	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAACTACATTTTGAC	22192826	False	NA	NA	False	AATAAA	-7	NA	22192930	22283344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
WTC11_00012520	chr11	+	6946	21	FSM	ENSG00000171714.13	ENST00000684663.1	6947	21	-9	10	3	-10	multi-exon	FALSE	canonical	3	5	junction_2	11.9440361687329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCCAGAAAAATTTGAGA	22191622	True	NA	NA	False	NA	NA	NA	22193035	22283557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
WTC11_00012523	chr11	+	1024	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	-129	0	129	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATGTTTGATTAA	22625463	False	NA	NA	False	NA	NA	NA	22625508	22626532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22625500_22626500
WTC11_00012525	chr11	+	376	1	FSM	ENSG00000240036.4	ENST00000476147.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCCAACCAACTGTACA	NA	False	NA	NA	False	NA	NA	NA	27581679	27582055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_27581700_27582100
WTC11_00012526	chr11	+	4231	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	-23	0	-23	0	multi-exon	FALSE	canonical	3	14	junction_1	42.7450451969452	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28107867	True	NA	19	True	AATAAA	-16	NA	28108364	28333507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
WTC11_00012527	chr11	+	3953	6	ISM	ENSG00000169519.21	ENST00000406787.7	4304	7	2064	0	0	0	3prime_fragment	FALSE	canonical	3	39	junction_4	37.3876985116763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28108401	True	NA	19	True	AATAAA	-16	NA	28110311	28333507	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
WTC11_00012529	chr11	+	2379	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	251	junction_2	38.8186667582606	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	30318990	True	NA	8	True	AATAAA	-16	NA	30323097	30338223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
WTC11_00012530	chr11	+	6998	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	9	-4262	1	4262	multi-exon	FALSE	canonical	3	77	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTGTTGCTGTTATTT	31367401	True	NA	NA	False	AATAAA	-22	NA	31369848	31421600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31369913_31370715_31370860_31414810
WTC11_00012531	chr11	+	2986	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	-16	0	2	0	multi-exon	FALSE	canonical	3	35	junction_4	20.994046775217	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	31367396	True	NA	7	True	AATAAA	-15	NA	31369843	31432835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
WTC11_00012532	chr11	+	8097	10	FSM	ENSG00000109911.19	ENST00000640961.2	8093	10	-5	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_4	51.9881277995156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGTGTCACTTTTTAT	31507255	True	NA	NA	False	AATAAA	-15	NA	31509761	31790323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
WTC11_00012533	chr11	+	1907	10	FSM	ENSG00000109911.19	ENST00000350638.10	1907	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.9881277995156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTTAGTTTAGTAATCC	31507255	True	NA	NA	False	TATAAA	-40	NA	31509761	31784130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
WTC11_00012534	chr11	+	337	1	FSM	ENSG00000281880.2	ENST00000630360.1	2965	1	1160	1468	1039	-1205	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCCTTTTAAACACCAG	NA	False	NA	NA	False	NA	NA	NA	31827506	31827843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31827500_31827800
WTC11_00012535	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	127.426841756358	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	32075687	True	NA	13	True	AATAAA	-18	NA	32091073	32105722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
WTC11_00012536	chr11	+	2653	2	FSM	ENSG00000049449.10	ENST00000531345.1	2653	2	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTACTGTGTCCTGTG	32101918	False	NA	1	True	AATAAA	-15	NA	32101994	32105531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32103481_32104364
WTC11_00012538	chr11	+	1718	6	FSM	ENSG00000149100.13	ENST00000531921.5	1697	6	-21	0	-21	0	multi-exon	FALSE	canonical	2	42	junction_3	1027.62066931334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAATAATAAAGACTTCA	32548681	True	NA	NA	False	NA	NA	NA	32583776	32596015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589546_32589642_32593865_32595014_32595965
WTC11_00012543	chr11	+	1210	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	-3	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	911.795313586087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	32548735	True	NA	NA	False	NA	NA	NA	32583830	32602823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
WTC11_00012544	chr11	+	5042	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	5	0	-5	multi-exon	FALSE	canonical	3	2368	junction_3	231.308646617458	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTCTTCATAAAATTC	32548735	True	NA	2	True	AATAAA	-15	NA	32583830	32606259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
WTC11_00012546	chr11	+	9706	13	FSM	ENSG00000060749.16	ENST00000650167.2	9706	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	46.0024153955227	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTTTGGGGTTTTT	32891418	True	NA	NA	False	ATTAAA	-29	NA	32892810	32980270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32893335_32927156_32927270_32927961_32928124_32931742_32935436_32953856_32954180_32955295_32955413_32955987_32956122_32957868_32958087_32966299_32966438_32969045_32969144_32973396_32973550_32975247_32975344_32976333
WTC11_00012547	chr11	+	462	3	FSM	ENSG00000060749.16	ENST00000527250.5	448	3	-14	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	26.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTGTATTAAGTAACAG	32893120	True	NA	NA	False	NA	NA	NA	32893245	32932002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32893335_32927156_32927270_32931742
WTC11_00012548	chr11	+	2416	9	FSM	ENSG00000060749.16	ENST00000524678.1	2416	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	29.5508037115744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTCTCACAGTGTA	32934570	False	NA	2	True	AATAAA	-16	NA	32934583	32975630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32935436_32953856_32954180_32955295_32955413_32955987_32956122_32957868_32958087_32966299_32966438_32969045_32969144_32973396_32973550_32975247
WTC11_00012549	chr11	+	1748	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	-7	0	-5	0	multi-exon	TRUE	canonical	3	42	junction_3	7.37288105152931	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	33015332	True	NA	14	True	AATAAA	-16	NA	33015870	33033582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
WTC11_00012550	chr11	+	1211	3	FSM	ENSG00000121690.11	ENST00000532078.1	1118	3	0	-93	0	93	multi-exon	FALSE	canonical	3	43	junction_2	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAGAATTCCTGTTGT	33015372	True	NA	NA	False	NA	NA	NA	33015910	33028387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33016029_33025658_33026050_33027685
WTC11_00012551	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.82035593498169	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	33037733	True	NA	8	True	ATTAAA	-1	NA	33039571	33073550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
WTC11_00012552	chr11	+	402	1	FSM	ENSG00000241255.1	ENST00000473603.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTGCAATCATGTTAT	NA	False	NA	NA	False	AAAAAG	-13	NA	33237007	33237409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33237000_33237400
WTC11_00012553	chr11	+	7732	17	FSM	ENSG00000110422.12	ENST00000303296.9	7614	17	-123	5	-123	-2	multi-exon	FALSE	canonical	3	23	junction_12	16.7257286836777	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACAGCTTGTTGACTTT	33255524	True	NA	11	True	ATTAAA	-15	NA	33257257	33357018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33257890_33286412_33287512_33328509_33328634_33337074_33337195_33338756_33338844_33339349_33339535_33340967_33341128_33341562_33341687_33347292_33347415_33347628_33347754_33347851_33348014_33348165_33348229_33348521_33348819_33349146_33349288_33351607_33351844_33352137_33352266_33353091
WTC11_00012556	chr11	+	5514	19	FSM	ENSG00000135387.21	ENST00000341394.9	5514	19	0	0	0	0	multi-exon	FALSE	canonical	2	458	junction_1	238.869850662564	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTCTCACTGTCCTTG	34045070	True	NA	13	True	ATTAAA	-14	NA	34051730	34102610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
WTC11_00012559	chr11	+	3499	18	FSM	ENSG00000135387.21	ENST00000389645.7	3498	18	-1	0	0	0	multi-exon	FALSE	canonical	2	458	junction_1	242.271474028677	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	34045070	True	NA	7	True	AATAAA	-14	NA	34051730	34099054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
WTC11_00012561	chr11	+	5820	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	4	-2386	4	240	multi-exon	FALSE	canonical	2	971	junction_12	136.083045070682	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCAGTTTGTTCCTGAT	34045553	False	NA	NA	False	NA	NA	NA	34052213	34102850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
WTC11_00012562	chr11	+	3454	17	FSM	ENSG00000135387.21	ENST00000530820.5	3454	17	0	0	0	0	multi-exon	FALSE	canonical	2	971	junction_12	128.930804479573	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	34036339	True	NA	11	True	AATAAA	-18	NA	34052328	34099058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
WTC11_00012566	chr11	+	4071	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	-103	5	-91	-5	multi-exon	FALSE	canonical	3	238	junction_13	28.0641348212502	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCAGCTGCCTGTGAG	34105515	False	NA	26	True	AATAAA	-12	NA	34105525	34146903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
WTC11_00012567	chr11	+	3436	27	FSM	ENSG00000135372.10	ENST00000531159.6	3436	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	63.2719896522641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCCAGGAGGCTGCT	34097854	True	NA	NA	False	NA	NA	NA	34105616	34146574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34105793_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
WTC11_00012568	chr11	+	416	2	FSM	ENSG00000135372.10	ENST00000534509.1	420	2	0	4	0	-4	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAAGCTTTTGTTTAG	34146704	False	NA	NA	False	NA	NA	NA	34146719	34147666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34147012_34147542
WTC11_00012569	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	13.5820551545862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	34437578	True	NA	9	True	AATAAA	-20	NA	34438933	34472060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
WTC11_00012573	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	46.4207927549713	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	34910616	True	NA	23	True	AATAAA	-19	NA	34916617	34996128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
WTC11_00012575	chr11	+	2309	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	-17	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.47558007920865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	35138633	True	NA	9	True	AATAAA	-24	NA	35139170	35230027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
WTC11_00012576	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.28490254498827	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	35138633	True	NA	14	True	ATTAAA	-32	NA	35139170	35232402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
WTC11_00012577	chr11	+	521	2	FSM	ENSG00000255542.1	ENST00000534165.1	518	2	-19	16	-19	-16	multi-exon	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAAAAAATAAATCT	NA	False	NA	NA	False	AAAAAG	-19	NA	35419037	35420986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35419108_35420535
WTC11_00012578	chr11	+	2809	1	FSM	ENSG00000179431.7	ENST00000317811.6	2406	1	-104	-299	-104	299	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTGTAGTATATTCCT	35617423	True	NA	NA	False	AATAAA	-18	NA	35618355	35621164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35618400_35621200
WTC11_00012579	chr11	+	1932	2	NNC	ENSG00000179431.7	novel	851	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTAATTCCTGTGGTTT	35617541	False	NA	9	True	AATAAA	-18	NA	35618473	35620865	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_35619916_35620375
WTC11_00012580	chr11	+	6221	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	-135	6908	-135	4478	multi-exon	FALSE	canonical	3	244	junction_2	25.7342184649155	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACGAGCTGCATACT	NA	False	NA	64	True	NA	NA	NA	35662639	35811099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
WTC11_00012581	chr11	+	1818	5	FSM	ENSG00000179241.13	ENST00000528989.5	1879	5	61	0	-20	0	multi-exon	FALSE	canonical	2	11	junction_1	43.5229824345713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTTGAGTTGGCCCA	35941454	True	NA	NA	False	NA	NA	NA	35944041	36230267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35944145_36081652_36081779_36098326_36098462_36227084_36227431_36229159
WTC11_00012582	chr11	+	3834	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	96	junction_4	10.8369737473153	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	35941454	True	NA	8	True	AATAAA	-18	NA	35944041	36232136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
WTC11_00012583	chr11	+	752	4	FSM	ENSG00000135362.14	ENST00000526682.5	805	4	53	0	32	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGGGGTGGCTTGCAA	36376329	False	NA	NA	False	NA	NA	NA	36376433	36403323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36376705_36393845_36394012_36400996_36401286_36403297
WTC11_00012585	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9.81019877474458	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593869	True	NA	11	True	AATAAA	-18	NA	36594501	36659272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
WTC11_00012586	chr11	+	809	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	-8	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.7715410570772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	36593875	True	NA	13	True	AATAAA	-20	NA	36594507	36659274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
WTC11_00012587	chr11	+	924	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	6	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.49941174435031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	36593875	True	NA	26	True	AATAAA	-33	NA	36594507	36659287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
WTC11_00012591	chr11	+	2280	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	-23	0	-8	0	multi-exon	FALSE	canonical	3	21	junction_1	464.027428156604	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	43293733	True	NA	NA	False	AATAAA	-14	NA	43311954	43342980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
WTC11_00012592	chr11	+	6952	14	NIC	ENSG00000166181.13	novel	3726	14	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	42	junction_13	386.790663992138	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTTGATGTGT	43293734	True	NA	22	True	AATAAA	-17	NA	43311955	43344528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43339240
WTC11_00012593	chr11	+	467	2	FSM	ENSG00000166181.13	ENST00000530300.1	553	2	0	86	0	-86	multi-exon	FALSE	canonical	3	1776	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATGGTATGGTCT	43293767	True	NA	NA	False	NA	NA	NA	43311988	43318898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639
WTC11_00012594	chr11	+	3733	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	-7	0	0	0	multi-exon	FALSE	canonical	3	649	junction_13	239.973445276493	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293767	True	NA	23	True	AATAAA	-18	NA	43311988	43344529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
WTC11_00012595	chr11	+	3762	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	-48	0	-8	0	multi-exon	FALSE	canonical	3	661	junction_13	237.266758718746	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293733	True	NA	23	True	AATAAA	-18	NA	43311954	43344529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
WTC11_00012596	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_9	132.236530505001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	43293874	True	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
WTC11_00012599	chr11	+	908	6	FSM	ENSG00000052841.15	ENST00000534347.5	889	6	-19	0	3	0	multi-exon	FALSE	canonical	3	5	junction_1	420.125505057715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTTCACATATTTAT	43352616	True	NA	NA	False	NA	NA	NA	43358934	43391870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43359114_43370078_43370386_43379232_43379323_43389651_43389822_43391464_43391577_43391820
WTC11_00012600	chr11	+	3660	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	-12	0	0	0	multi-exon	FALSE	canonical	3	194	junction_19	151.783524228247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	43352601	True	NA	NA	False	TATAAA	-16	NA	43358919	43446719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
WTC11_00012601	chr11	+	6759	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_19	155.78394939431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGTCTGTCATGTGA	43358874	False	NA	3	True	AATAAA	-14	NA	43358886	43494927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
WTC11_00012602	chr11	+	4488	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	189.520327752408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	43352601	True	NA	7	True	AATAAA	-18	NA	43358919	43494931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
WTC11_00012603	chr11	+	4621	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_19	127.838215628192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGTCTGTCATGTGA	43352635	True	NA	3	True	AATAAA	-14	NA	43358953	43494927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
WTC11_00012611	chr11	+	2606	2	FSM	ENSG00000052841.15	ENST00000533072.1	2607	2	0	1	0	1	multi-exon	FALSE	canonical	3	519	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGTCATGTGATTTTT	NA	False	NA	8	True	AATAAA	-19	NA	43490717	43494932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43492164_43493772
WTC11_00012612	chr11	+	419	1	FSM	ENSG00000283341.3	ENST00000686251.1	1386	1	100	867	70	-867	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCAGGAGTTATGAACG	43644240	False	NA	NA	False	NA	NA	NA	43644335	43644754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43644300_43644800
WTC11_00012613	chr11	+	624	6	FSM	ENSG00000149084.13	ENST00000531185.5	611	6	-13	0	-13	0	multi-exon	FALSE	canonical	2	10	junction_1	411.07634327458	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAAAAAATATTTTCTT	43668752	True	NA	NA	False	NA	NA	NA	43680695	43838395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43680988_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316
WTC11_00012614	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_3	39.7830365859621	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43668794	True	NA	27	True	AATAAA	-43	NA	43680737	43856615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
WTC11_00012615	chr11	+	554	3	FSM	ENSG00000149084.13	ENST00000636722.1	540	3	-14	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	524.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTAATTAATGTTTT	43668837	True	NA	NA	False	NA	NA	NA	43680780	43754149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43681184_43750910_43750958_43754045
WTC11_00012616	chr11	+	880	10	FSM	ENSG00000149084.13	ENST00000637401.1	866	10	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	327.46535016022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATAACTGCATTGTAAC	43668837	True	NA	NA	False	AAGAAA	-18	NA	43680780	43855250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
WTC11_00012618	chr11	+	560	2	FSM	ENSG00000166199.13	ENST00000527029.1	569	2	9	0	9	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTATAATGGACTTCCA	43880010	True	NA	NA	False	NA	NA	NA	43880839	43882802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43881180_43882582
WTC11_00012619	chr11	+	1535	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	9	0	9	0	multi-exon	FALSE	canonical	2	26	junction_2	12.3867711194416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	43880010	True	NA	11	True	ATTAAA	-24	NA	43880839	43920274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
WTC11_00012620	chr11	+	646	6	FSM	ENSG00000166199.13	ENST00000532410.1	648	6	2	0	2	0	multi-exon	FALSE	canonical	2	6	junction_4	22.0036360631601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTAATAGGTCTACTG	43882255	False	NA	-90	True	ATTAAA	-18	NA	43883084	43920173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
WTC11_00012621	chr11	+	1360	1	FSM	ENSG00000187479.8	ENST00000617612.3	1242	1	-119	1	-119	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGTTTTCCAGGCTCT	NA	False	NA	5	True	AATAAA	-17	NA	43942517	43943877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43942500_43943900
WTC11_00012623	chr11	+	3350	7	FSM	ENSG00000110455.14	ENST00000527346.5	3373	7	0	23	0	-23	multi-exon	FALSE	canonical	2	2	junction_1	6.71854812358212	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTTTGTAGAAAAATAAAAA	44075498	False	NA	-34	True	NA	NA	NA	44075530	44084199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44075593_44077322_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
WTC11_00012624	chr11	+	10056	14	FSM	ENSG00000151348.16	ENST00000533608.7	10037	14	-19	0	-4	0	multi-exon	FALSE	canonical	3	168	junction_2	27.9136453662566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTATTATATGTGGAT	44090540	True	NA	NA	False	AATAAA	-19	NA	44095658	44251962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
WTC11_00012625	chr11	+	4937	12	FSM	ENSG00000151348.16	ENST00000684533.1	4928	12	-9	0	6	0	multi-exon	FALSE	canonical	3	15	junction_4	60.7827726789874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	NA	False	NA	NA	False	TATAAA	-23	NA	44095653	44247174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
WTC11_00012626	chr11	+	2250	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	-37	-1	-15	1	multi-exon	FALSE	canonical	3	24	junction_6	9.7080849594679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCTGGAATGGTAGGG	44564627	True	NA	6	True	ATTAAA	-16	NA	44565625	44620359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
WTC11_00012627	chr11	+	4555	10	FSM	ENSG00000157570.12	ENST00000520358.7	4557	10	0	2	0	0	multi-exon	FALSE	canonical	3	39	junction_3	9.7524925588852	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGGTGGTCTTGATTT	44724212	True	NA	89	True	AATAAA	-12	NA	44726961	44932421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44727288_44764425_44764513_44860327_44860470_44906406_44906480_44909704_44909900_44917971_44918047_44919213_44919313_44919816_44920000_44926673_44926758_44929130
WTC11_00012629	chr11	+	3480	7	FSM	ENSG00000019485.14	ENST00000534751.3	3466	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	7	junction_6	7.20532210707243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATCAATCTCACT	45146578	False	NA	-16	True	NA	NA	NA	45146624	45214713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45146878_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45208873_45209296_45212468
WTC11_00012630	chr11	+	10743	8	FSM	ENSG00000019485.14	ENST00000683152.1	10729	8	-14	0	-14	0	multi-exon	FALSE	canonical	2	3	junction_7	7.57277616039918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCACTGTTGAATTGCT	45146578	False	NA	4	True	AATAAA	-15	NA	45146624	45235109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45146878_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45219569_45219758_45224216_45224844_45225994
WTC11_00012631	chr11	+	652	4	FSM	ENSG00000019485.14	ENST00000528980.1	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	6.53197264742181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCCAACCCTCAATGAG	45182771	False	NA	NA	False	NA	NA	NA	45182916	45226183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45183124_45204710_45204779_45219569_45219758_45225994
WTC11_00012632	chr11	+	1569	2	FSM	ENSG00000254427.3	ENST00000524565.1	872	2	-12	-685	-11	122	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCACCCTAACCCAGGC	45355399	True	NA	NA	False	AATATA	-27	NA	45355488	45357333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45355603_45355878
WTC11_00012633	chr11	+	1742	3	FSM	ENSG00000181830.9	ENST00000442528.2	1756	3	14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.5	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTCTCTATCCTCTC	45804031	True	NA	12	True	NA	NA	NA	45804085	45811558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45804518_45805809_45806337_45810775
WTC11_00012634	chr11	+	695	2	FSM	ENSG00000181830.9	ENST00000530471.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCAGCTGGGGCCA	45804541	True	NA	NA	False	NA	NA	NA	45805148	45806336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45805317_45805809
WTC11_00012635	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	45804541	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45806337_45810775
WTC11_00012636	chr11	+	4179	12	FSM	ENSG00000121671.12	ENST00000616623.4	4204	12	25	0	25	0	multi-exon	FALSE	canonical	3	50	junction_7	7.24198046060161	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCTGTCGTCAATCT	45846154	True	NA	18	True	TATAAA	-22	NA	45847430	45883248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45847706_45855981_45856091_45858730_45858874_45860847_45861033_45862059_45862149_45867611_45867753_45869505_45869818_45870052_45870205_45870329_45870533_45870841_45870935_45872091_45872234_45880913
WTC11_00012637	chr11	+	3063	12	FSM	ENSG00000121653.11	ENST00000241014.6	3050	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	102	junction_2	18.2158771904672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	45883827	True	NA	13	True	ATTAAA	-20	NA	45885637	45906465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45885922_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
WTC11_00012638	chr11	+	2552	14	FSM	ENSG00000165905.18	ENST00000401752.6	2552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	205.023508538056	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45915952	True	NA	36	True	ATTAAA	-14	NA	45922655	45929096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
WTC11_00012639	chr11	+	2296	14	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	15	-10	combination_of_known_splicesites	FALSE	canonical	3	147	junction_4	199.828180633133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAATTAAAGTTTTAAAA	45915967	True	NA	12	True	GGGGCT	-33	NA	45922670	45929072	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
WTC11_00012640	chr11	+	2389	11	NIC	ENSG00000165905.18	novel	2522	13	NA	NA	48	0	intron_retention	FALSE	canonical	3	131	junction_1	182.260829582223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45916000	True	NA	36	True	ATTAAA	-14	NA	45922703	45929096	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45923168_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
WTC11_00012641	chr11	+	2630	13	FSM	ENSG00000165905.18	ENST00000325468.9	2522	13	-122	14	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.321755073071	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	45915952	True	NA	22	True	GGGGCT	-43	NA	45922655	45929082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
WTC11_00012642	chr11	+	2294	10	FSM	ENSG00000165905.18	ENST00000528236.5	2294	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	283.80000783024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45924130	False	NA	36	True	ATTAAA	-14	NA	45924149	45929096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45924278_45924505_45924678_45924784_45924890_45926038_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927748_45928070_45928176_45928373_45928629
WTC11_00012647	chr11	+	2695	12	FSM	ENSG00000157613.11	ENST00000621158.5	2673	12	-22	0	-22	0	multi-exon	FALSE	canonical	3	81	junction_1	12.1526108476007	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	46276714	True	NA	NA	False	AAGAAA	-26	NA	46277639	46321409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46278214_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
WTC11_00012648	chr11	+	3824	31	FSM	ENSG00000149091.15	ENST00000343674.10	3816	31	-8	0	-8	0	multi-exon	TRUE	canonical	3	51	junction_1	129.102822931526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	46332777	True	NA	19	True	AGTAAA	-19	NA	46332896	46380554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46333488_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00012649	chr11	+	3129	31	FSM	ENSG00000149091.15	ENST00000532868.6	3118	31	-11	0	-11	0	multi-exon	FALSE	canonical	3	14	junction_2	147.541090321759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCCTCACCTGTTCC	46345245	False	NA	NA	False	NA	NA	NA	46345255	46380120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46345586_46367290_46367400_46367654_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00012651	chr11	+	3337	31	FSM	ENSG00000149091.15	ENST00000527911.5	3337	31	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_29	123.17898449907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCGGGAAGAGGCTTCC	46343945	True	NA	NA	False	GGGGCT	-13	NA	46347462	46380282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379453_46379569_46379830
WTC11_00012652	chr11	+	3591	31	FSM	ENSG00000149091.15	ENST00000421244.6	2862	31	-125	-604	0	0	multi-exon	FALSE	canonical	3	387	junction_3	67.4583739962817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46343945	True	NA	16	True	AGTAAA	-16	NA	46347462	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00012654	chr11	+	3482	31	FSM	ENSG00000149091.15	ENST00000456247.6	3482	31	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	92.6971712381535	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	46344054	False	NA	19	True	AGTAAA	-19	NA	46347571	46380554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00012655	chr11	+	5737	26	FSM	ENSG00000149091.15	ENST00000528173.5	5737	26	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	61.7646371316144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTTTCTTCTTTTGC	NA	False	NA	18	True	AGTAAA	-18	NA	46367314	46380553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46367400_46367651_46367748_46368001_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46379112_46379202_46379569_46379830
WTC11_00012658	chr11	+	3126	3	FSM	ENSG00000149091.15	ENST00000527211.5	3679	3	553	0	-75	0	multi-exon	FALSE	canonical	3	579	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46377061	False	NA	16	True	AGTAAA	-16	NA	46377072	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46379112_46379202_46379569_46379830
WTC11_00012661	chr11	+	1999	4	FSM	ENSG00000149091.15	ENST00000534802.1	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	4.98887651569859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46377949	False	NA	16	True	AGTAAA	-16	NA	46377967	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00012662	chr11	+	1180	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	-30	16	-30	0	multi-exon	FALSE	canonical	3	230	junction_1	3740.20871743811	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	46380713	False	NA	-28	True	AATAAA	-1	NA	46380725	46383783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
WTC11_00012663	chr11	+	540	3	FSM	ENSG00000110492.17	ENST00000441869.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTGCGGCGTGGGTTT	46380889	False	NA	NA	False	NA	NA	NA	46380936	46382364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381329_46382056_46382134_46382293
WTC11_00012664	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3992.71856703619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	46380303	True	NA	NA	False	GGGGCT	-33	NA	46381060	46382821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
WTC11_00012665	chr11	+	992	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3839.67088433371	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	46380303	True	NA	14	True	AATAAA	-43	NA	46381060	46383825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
WTC11_00012666	chr11	+	522	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	-24	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4224.06639257587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	46297178	True	NA	NA	False	NA	NA	NA	46381668	46383570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
WTC11_00012667	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	5885	junction_1	1301.04465238515	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	46297178	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
WTC11_00012668	chr11	+	775	3	FSM	ENSG00000110492.17	ENST00000481047.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	8656	junction_1	43.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGTCGCGGGGGGCTG	46297220	True	NA	NA	False	NA	NA	NA	46381710	46382770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46382134_46382293_46382462_46382586
WTC11_00012669	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	3745.83030682117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	46297220	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
WTC11_00012670	chr11	+	1042	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	-16	0	0	0	multi-exon	FALSE	canonical	3	8656	junction_1	224.156195542305	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	46297246	True	NA	-28	True	AATAAA	-1	NA	46381736	46383783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
WTC11_00012671	chr11	+	1339	5	FSM	ENSG00000110492.17	ENST00000489525.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	4250.12932156187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTTTTTTAATATAT	46297246	True	NA	-5	True	AATAAA	-24	NA	46381736	46383806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46383194_46383468
WTC11_00012672	chr11	+	4284	16	NIC	ENSG00000175224.17	novel	4014	17	NA	NA	-276	0	intron_retention	TRUE	canonical	3	79	junction_1	82.1141211296138	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	NA	False	NA	14	True	AATAAA	-20	NA	46617250	46674520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012674	chr11	+	1029	9	FSM	ENSG00000175224.17	ENST00000533325.5	1021	9	-8	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	181.602889225364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCATTGCTGCTGAA	46613959	True	NA	NA	False	GATAAA	-31	NA	46617540	46650216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46618259_46618376_46630044_46630101_46632322_46632460_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176
WTC11_00012676	chr11	+	4221	18	FSM	ENSG00000175224.17	ENST00000526508.5	4199	18	-22	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	153.025474505884	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46613959	True	NA	14	True	AATAAA	-20	NA	46617540	46674520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012677	chr11	+	3926	18	NNC	ENSG00000175224.17	novel	4246	19	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_17	102.742261598327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACTTTACAGCCTCC	46613966	True	NA	0	True	AATAAA	-6	NA	46617547	46674506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254_46674113_46674215
WTC11_00012678	chr11	+	2691	18	NNC	ENSG00000175224.17	novel	4246	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	133.135958294532	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGATTTTGTCACTTGG	46613968	True	NA	15	True	AATAAA	-17	NA	46617549	46673038	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_46617891_46630044_46630101_46632327_46632460_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012681	chr11	+	2601	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	109.179593302732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGATTTTGTCACTTGG	46613986	True	NA	15	True	AATAAA	-17	NA	46617567	46673038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012682	chr11	+	4023	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	-9	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	63.7075532707857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46613986	True	NA	14	True	AATAAA	-20	NA	46617567	46674520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012683	chr11	+	4111	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_2	102.186612656592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46614014	False	NA	14	True	AATAAA	-20	NA	46617595	46674520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00012687	chr11	+	2510	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	-281	0	-280	0	multi-exon	TRUE	canonical	3	90	junction_2	3.64005494464026	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	NA	False	NA	13	True	CATAAA	-17	NA	46700749	46705912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
WTC11_00012688	chr11	+	1544	3	FSM	ENSG00000247675.8	ENST00000502049.3	1540	3	-4	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCATTTGATTGGGG	46846349	True	NA	8	True	AATAAA	-44	NA	46846411	46874421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46846500_46846609_46846718_46873073
WTC11_00012691	chr11	+	1693	9	FSM	ENSG00000149179.14	ENST00000278460.12	1650	9	-45	2	-14	0	multi-exon	FALSE	canonical	3	176	junction_8	29.9081928574764	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933724	True	NA	22	True	AATAAA	-19	NA	46936715	47162245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
WTC11_00012692	chr11	+	1711	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	-62	2	-14	0	multi-exon	FALSE	canonical	3	30	junction_8	77.1050419881865	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933724	True	NA	22	True	AATAAA	-19	NA	46936715	47162245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
WTC11_00012693	chr11	+	1966	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	-52	2	-14	0	multi-exon	FALSE	canonical	3	245	junction_7	10.7760126660835	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933724	True	NA	22	True	AATAAA	-19	NA	46936715	47162245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
WTC11_00012695	chr11	+	734	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	-15	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	46933753	True	NA	NA	False	NA	NA	NA	46936744	47138037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
WTC11_00012699	chr11	+	1405	1	FSM	ENSG00000149179.14	ENST00000624693.1	2141	1	-514	1250	-514	-195	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGATCTTTAGATCGG	47159571	False	NA	NA	False	NA	NA	NA	47159590	47160995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47159600_47161000
WTC11_00012700	chr11	+	1923	11	NIC	ENSG00000134574.12	novel	1815	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	145.015033703406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCGTGGATCTTCC	47214302	True	NA	24	True	AATAAA	-14	NA	47214468	47239216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47214675_47215070_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
WTC11_00012703	chr11	+	1609	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	-18	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	145.439796393559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	47210429	True	NA	-3	True	NA	NA	NA	47214973	47239189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
WTC11_00012704	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	47210513	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47215264_47216335_47216473_47216857
WTC11_00012707	chr11	+	3108	8	FSM	ENSG00000134574.12	ENST00000612309.4	3101	8	-7	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	78.4541982591741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210543	True	NA	25	True	AATAAA	-15	NA	47215087	47239217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47235413_47237836_47238002_47238137_47238184_47238799
WTC11_00012713	chr11	+	1525	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	-24	0	-24	0	multi-exon	TRUE	canonical	3	27	junction_1	27.3104261226368	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	47247890	True	NA	-24	True	NA	NA	NA	47248891	47268812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
WTC11_00012716	chr11	+	2740	9	FSM	ENSG00000025434.19	ENST00000467728.5	2731	9	-9	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	24.9195580819564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47257576	True	NA	9	True	ATTAAA	-16	NA	47257969	47268845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
WTC11_00012717	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	29.0516780926679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	47257602	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
WTC11_00012721	chr11	+	6005	33	FSM	ENSG00000110514.19	ENST00000342922.8	6005	33	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.7150681038312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47269181	True	NA	15	True	AATAAA	-15	NA	47269375	47330031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269645_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00012723	chr11	+	5883	34	FSM	ENSG00000110514.19	ENST00000349238.7	5873	34	-10	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_15	34.3688735253468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47268914	True	NA	15	True	AATAAA	-15	NA	47269663	47330031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47288967_47289028_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00012725	chr11	+	5694	33	FSM	ENSG00000110514.19	ENST00000402799.5	5684	33	-10	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_1	28.0735640772596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47268914	True	NA	15	True	AATAAA	-15	NA	47269663	47330031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00012727	chr11	+	5806	33	NNC	ENSG00000110514.19	novel	5823	33	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	29.542458190501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47268656	True	NA	15	True	AATAAA	-15	NA	47270125	47330031	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289788_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00012728	chr11	+	5823	33	FSM	ENSG00000110514.19	ENST00000402192.6	5823	33	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_21	26.7847321248505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	47268686	True	NA	14	True	AATAAA	-14	NA	47270155	47330030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00012732	chr11	+	806	5	FSM	ENSG00000165915.14	ENST00000531419.5	785	5	-21	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	85.3445223784163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGCGCCCTCATCTA	47407529	True	NA	NA	False	NA	NA	NA	47408583	47413778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596
WTC11_00012733	chr11	+	2309	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	162	junction_1	25.3542798393652	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	47407533	True	NA	28	True	AATAAA	-12	NA	47408587	47416494	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
WTC11_00012734	chr11	+	846	7	FSM	ENSG00000165915.14	ENST00000531865.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	73.8250559694261	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTAGGTACGGGCGTGG	47407573	True	NA	NA	False	NA	NA	NA	47408627	47414901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596_47413687_47414424_47414476_47414776
WTC11_00012735	chr11	+	3553	5	FSM	ENSG00000165915.14	ENST00000524928.1	3553	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	24.7525251237121	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	47409030	False	NA	28	True	AATAAA	-12	NA	47410084	47416494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596
WTC11_00012739	chr11	+	3424	3	FSM	ENSG00000110536.14	ENST00000527079.2	2272	3	-708	-444	-240	444	multi-exon	FALSE	canonical	3	836	junction_2	14	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAATTACTGTATGGCA	NA	False	NA	NA	False	NA	NA	NA	47565189	47573905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565987_47569699_47569892_47571470
WTC11_00012740	chr11	+	2548	2	FSM	ENSG00000110536.14	ENST00000426530.2	1014	2	0	-1534	0	0	multi-exon	FALSE	canonical	3	298	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	47565401	False	NA	11	True	AATAAA	-21	NA	47565429	47573461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565987_47571470
WTC11_00012741	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	285	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	47557560	True	NA	NA	False	NA	NA	NA	47565598	47572119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565797_47565905_47565987_47571470
WTC11_00012742	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	14.2361043360417	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	47557560	True	NA	11	True	AATAAA	-21	NA	47565598	47573461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
WTC11_00012743	chr11	+	315	4	FSM	ENSG00000213619.11	ENST00000534716.2	1263	4	-59	1007	-14	0	multi-exon	FALSE	canonical	3	1152	junction_2	43.6450328088878	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAATGAGTTAGAGGTC	47566078	True	NA	NA	False	NA	NA	NA	47579014	47580841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834
WTC11_00012744	chr11	+	580	2	FSM	ENSG00000213619.11	ENST00000533105.1	567	2	-13	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAATGAGTTAGAGGTC	47566135	True	NA	NA	False	NA	NA	NA	47579071	47580841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579335_47580524
WTC11_00012745	chr11	+	896	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	-2	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	38.7499103941616	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	47566135	True	NA	29	True	AATAAA	-17	NA	47579071	47584562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
WTC11_00012747	chr11	+	280	1	FSM	ENSG00000271557.1	ENST00000605553.1	359	1	194	-115	194	115	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTCAACCTCCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	47841517	47841797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47841500_47841800
WTC11_00012748	chr11	+	3662	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	-70	-434	-49	434	multi-exon	FALSE	canonical	3	30	junction_8	12.1243556529821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGAAATGGGGGCTCTG	47979203	True	NA	NA	False	NA	NA	NA	47980509	48133154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
WTC11_00012749	chr11	+	7992	25	FSM	ENSG00000149177.14	ENST00000418331.7	7845	25	-147	0	-147	0	multi-exon	FALSE	canonical	0	0	junction_16	19.7821029524725	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTTTGCTTCTTTCT	NA	False	NA	7	True	TATAAA	-15	NA	47980411	48170839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48136038_48136297_48137002_48137282_48139485_48139777_48142918_48143051_48144674_48144886_48144999_48145125_48146875_48146964_48149446_48149489_48149989_48149999_48150095_48150184_48153795_48153887_48155800_48155875_48155984_48156120_48159929_48160050_48163457_48163619_48164379_48164516_48167203
WTC11_00012750	chr11	+	2283	3	FSM	ENSG00000186907.8	ENST00000335099.8	2224	3	-59	0	-59	0	multi-exon	FALSE	canonical	3	128	junction_2	6	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTAAGATTTGTTGA	57458846	True	NA	11	True	ATTAAA	-17	NA	57460468	57477534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57460897_57467608_57468091_57476161
WTC11_00012751	chr11	+	1007	3	FSM	ENSG00000186907.8	ENST00000533205.5	637	3	-388	18	-59	-18	multi-exon	FALSE	canonical	2	8	junction_2	66	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATCTAATTATTGTTTA	57458846	True	NA	-7	True	NA	NA	NA	57460468	57468866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57460897_57467608_57468091_57468769
WTC11_00012752	chr11	+	1744	7	FSM	ENSG00000149131.17	ENST00000619430.2	1748	7	1	3	1	0	multi-exon	FALSE	canonical	1	1	junction_4	235.82815070866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	57597527	False	NA	13	True	AATAAA	-14	NA	57597563	57614845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606407_57606548_57611716_57611937_57614327
WTC11_00012753	chr11	+	1910	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	-97	17	25	0	multi-exon	FALSE	canonical	3	108	junction_1	162.783692709819	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGACAGACCATGACTT	57597551	False	NA	-1	True	TATAAA	-4	NA	57597587	57614831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
WTC11_00012754	chr11	+	2255	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	43	58	38	0	3prime_fragment	FALSE	canonical	3	428	junction_2	69.184937345896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	57595414	False	NA	-42	True	NA	NA	NA	57597727	57614790	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
WTC11_00012756	chr11	+	2546	6	FSM	ENSG00000149131.17	ENST00000676741.1	2849	6	303	0	303	0	multi-exon	FALSE	canonical	3	428	junction_1	75.7839033040658	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	57599021	False	NA	13	True	AATAAA	-14	NA	57599048	57614845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
WTC11_00012757	chr11	+	1861	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	-33	0	-22	0	multi-exon	FALSE	canonical	3	190	junction_2	1	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	57653614	True	NA	32	True	AATAAA	-19	NA	57657728	57661865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57657861_57659454_57660083_57660764
WTC11_00012758	chr11	+	1635	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	-1	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	95	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	57653647	True	NA	31	True	AATAAA	-18	NA	57657761	57661864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57657861_57659454_57659891_57660764
WTC11_00012760	chr11	+	4756	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	-313	0	54	0	multi-exon	FALSE	canonical	3	319	junction_2	44.3343793244322	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	57663686	False	NA	11	True	AATAAA	-18	NA	57667800	57701182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
WTC11_00012761	chr11	+	440	4	FSM	ENSG00000156599.11	ENST00000532842.1	440	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	163.382985650281	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACGTGGTTCTGGTGGC	57673127	False	NA	NA	False	NA	NA	NA	57673143	57690392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57673195_57688507_57688666_57690030_57690204_57690334
WTC11_00012763	chr11	+	1754	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	-53	-4	-32	0	multi-exon	FALSE	canonical	3	40	junction_2	305.977323422798	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705880	True	NA	20	True	AATAAA	-22	NA	57712560	57740973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
WTC11_00012769	chr11	+	1921	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	-276	0	276	multi-exon	FALSE	canonical	3	565	junction_2	144.546016964869	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTGCGCGAAGCGAG	57705912	True	NA	NA	False	NA	NA	NA	57712592	57741249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
WTC11_00012770	chr11	+	1807	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	-10	-276	0	276	multi-exon	FALSE	canonical	3	201	junction_2	267.958744751667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTGCGCGAAGCGAG	57705912	True	NA	NA	False	NA	NA	NA	57712592	57741249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
WTC11_00012772	chr11	+	1476	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	-22	0	0	0	multi-exon	FALSE	canonical	3	2985	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	57706537	True	NA	13	True	AATAAA	-35	NA	57741490	57743057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57741718_57741808
WTC11_00012773	chr11	+	1294	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	-241	139	-241	-103	multi-exon	FALSE	canonical	3	2543	junction_3	180.962856839617	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCAAAGTGCTGGGGT	57741238	False	NA	NA	False	NA	NA	NA	57741249	57743411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
WTC11_00012776	chr11	+	6143	19	FSM	ENSG00000198561.16	ENST00000358694.10	6135	19	-8	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	213.271750370678	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	NA	False	NA	5	True	ATTAAA	-18	NA	57761788	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012778	chr11	+	5659	16	FSM	ENSG00000198561.16	ENST00000532245.5	5655	16	-4	0	-4	0	multi-exon	FALSE	canonical	3	114	junction_1	187.802331070611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012780	chr11	+	5818	18	FSM	ENSG00000198561.16	ENST00000530094.5	5814	18	-4	0	-4	0	multi-exon	FALSE	canonical	1	3	junction_17	297.978041967541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57815914_57816002_57816296
WTC11_00012781	chr11	+	5755	17	FSM	ENSG00000198561.16	ENST00000532787.5	5751	17	-4	0	-4	0	multi-exon	FALSE	canonical	1	3	junction_16	331.686122100021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57815393_57815501_57815914_57816002_57816296
WTC11_00012785	chr11	+	5057	15	FSM	ENSG00000198561.16	ENST00000531014.5	5053	15	-4	0	-4	0	multi-exon	FALSE	canonical	1	3	junction_14	343.866972676876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57815914_57816002_57816296
WTC11_00012786	chr11	+	5735	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	-8	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	175.398998268947	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	NA	False	NA	5	True	ATTAAA	-18	NA	57761788	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012788	chr11	+	6036	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	-12	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	232.792600960014	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	NA	False	NA	5	True	ATTAAA	-18	NA	57761788	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012789	chr11	+	5804	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	-4	0	-4	0	multi-exon	FALSE	canonical	3	48	junction_1	202.186476040684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012790	chr11	+	6230	20	FSM	ENSG00000198561.16	ENST00000361796.9	6226	20	-4	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_1	310.195925932908	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012791	chr11	+	6024	18	FSM	ENSG00000198561.16	ENST00000428599.6	6016	18	-8	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	225.627889758066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	NA	False	NA	5	True	ATTAAA	-18	NA	57761788	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012792	chr11	+	6299	20	FSM	ENSG00000198561.16	ENST00000361332.8	6295	20	-4	0	-4	0	multi-exon	FALSE	canonical	1	3	junction_19	321.397355912913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57815914_57816002_57816296
WTC11_00012793	chr11	+	6236	19	FSM	ENSG00000198561.16	ENST00000361391.10	6232	19	-4	0	-4	0	multi-exon	FALSE	canonical	1	3	junction_18	342.749706215937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57815393_57815501_57815914_57816002_57816296
WTC11_00012794	chr11	+	5753	17	FSM	ENSG00000198561.16	ENST00000532463.5	5749	17	-4	0	-4	0	multi-exon	FALSE	canonical	3	20	junction_1	208.43905546646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748898	True	NA	5	True	ATTAAA	-18	NA	57761792	57819178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762069_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012795	chr11	+	6683	21	FSM	ENSG00000198561.16	ENST00000399050.10	6670	21	-13	0	0	0	multi-exon	FALSE	canonical	1	3	junction_20	352.35713062176	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTATATGCTAAGCGTT	NA	False	NA	NA	False	AATAAA	-14	NA	57761788	57819540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57815914_57816002_57816296
WTC11_00012796	chr11	+	5389	19	NIC	ENSG00000198561.16	novel	6135	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_18	256.903690461697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGGGGGTCTGTGT	57748910	True	NA	20	True	AATAAA	-13	NA	57761804	57818443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816299
WTC11_00012801	chr11	+	5245	19	NIC	ENSG00000198561.16	novel	5926	16	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	250.745881149781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGGGGGTCTGTGTCAT	57781180	True	NA	23	True	AATAAA	-16	NA	57781554	57818446	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_57781647_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012804	chr11	+	8135	16	FSM	ENSG00000198561.16	ENST00000681984.1	5926	16	-2985	776	-2825	0	multi-exon	FALSE	canonical	3	594	junction_1	81.8281668430186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAATGCTTTTAAAAAC	57790520	False	NA	-36	True	GGGGCT	-39	NA	57790560	57818387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012805	chr11	+	6410	13	FSM	ENSG00000198561.16	ENST00000683906.1	6410	13	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	55.8388057019688	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTGCTCCTGATGA	57800012	False	NA	-10	True	ATTAAA	-3	NA	57800023	57819163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00012809	chr11	+	4375	8	FSM	ENSG00000198561.16	ENST00000684035.1	4374	8	-1	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	285.098192894723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGGGGGTCTGTGTCAT	57805498	False	NA	23	True	AATAAA	-16	NA	57805540	57818446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57815393_57815501_57816296
WTC11_00012820	chr11	+	4439	3	FSM	ENSG00000166801.17	ENST00000420244.6	4439	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	22	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	59143601	True	NA	31	True	ATTAAA	-15	NA	59144861	59155036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59145857_59148796_59148954_59151749
WTC11_00012821	chr11	+	4202	3	FSM	ENSG00000166801.17	ENST00000533703.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTATTTGTCAGCCTCTTT	59143802	False	NA	34	True	ATTAAA	-18	NA	59145062	59155039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59145857_59148835_59148954_59151749
WTC11_00012822	chr11	+	6019	9	FSM	ENSG00000110042.8	ENST00000227451.4	6003	9	-16	0	-16	0	multi-exon	TRUE	canonical	3	35	junction_8	9.15150260886156	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCACCCAAATCTGT	59171424	True	NA	8	True	AATAAA	-18	NA	59172115	59208588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59172807_59181738_59182463_59188734_59188797_59189161_59189324_59191113_59191176_59192097_59192251_59195207_59195370_59199683_59199774_59204675
WTC11_00012823	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_10	63.7574309394599	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	59748580	True	NA	5	True	AATAAA	-16	NA	59755375	59805878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
WTC11_00012824	chr11	+	697	4	FSM	ENSG00000166900.17	ENST00000530498.1	690	4	-7	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	57.1392062325763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTTTTGTGACTTG	59748656	True	NA	6	True	ATTAAA	-16	NA	59755451	59789201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872
WTC11_00012825	chr11	+	2863	10	FSM	ENSG00000166900.17	ENST00000529177.5	1571	10	-76	-1216	0	-7	multi-exon	FALSE	canonical	3	76	junction_9	146.98257224314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACGGTTCTGGCTCTGT	59748580	True	NA	18	True	AATAAA	-20	NA	59755375	59802701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59800854
WTC11_00012827	chr11	+	1904	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	-58	5	-58	0	multi-exon	FALSE	canonical	3	569	junction_2	20.704266871026	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCACGTGTCCAATGG	60835586	True	NA	13	True	AATAAA	-9	NA	60842054	60851076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
WTC11_00012838	chr11	+	2013	2	FSM	ENSG00000006118.15	ENST00000540112.1	2013	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGAAGGAAACCAGAGCT	60934628	False	NA	1	True	AATAAA	-1	NA	60934642	60937142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60934765_60935251
WTC11_00012840	chr11	+	680	4	FSM	ENSG00000256713.8	ENST00000451616.6	971	4	291	0	291	0	multi-exon	FALSE	canonical	2	2	junction_2	1.88561808316413	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61248412	61251444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61248536_61249668_61249814_61249915_61250015_61251131
WTC11_00012845	chr11	+	4684	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	-6	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.474347332758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	61331890	True	NA	NA	False	NA	NA	NA	61333221	61349242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
WTC11_00012859	chr11	+	1207	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	-30	298	0	0	multi-exon	FALSE	canonical	3	163	junction_4	23.7907545067406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61361963	False	NA	NA	False	AATAAA	-21	NA	61362343	61369211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
WTC11_00012861	chr11	+	1635	2	FSM	ENSG00000149483.13	ENST00000539776.1	1635	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61366960	False	NA	NA	False	AATAAA	-21	NA	61366978	61369211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61367999_61368596
WTC11_00012863	chr11	+	1321	5	FSM	ENSG00000187049.11	ENST00000334888.10	1062	5	-242	-17	-48	-3	multi-exon	FALSE	non_canonical	0	0	junction_4	161.185452197151	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	NA	False	NA	34	True	AATAAA	-34	NA	61392344	61398863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398260
WTC11_00012873	chr11	+	1205	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	-19	0	0	0	multi-exon	FALSE	canonical	3	460	junction_3	47.377913278939	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	61419031	True	NA	18	True	ATTAAA	-20	NA	61430104	61446733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
WTC11_00012877	chr11	+	1107	3	FSM	ENSG00000162148.11	ENST00000538185.1	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGTGACATCACTATC	NA	False	NA	3	True	AATAAA	-15	NA	61489037	61490927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61489947_61490500_61490585_61490813
WTC11_00012878	chr11	+	2264	1	FSM	ENSG00000204950.4	ENST00000378075.4	2270	1	477	-471	477	471	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAGTTGTAAAACCCA	61509153	False	NA	NA	False	AATAAA	-19	NA	61509225	61511489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61509200_61511500
WTC11_00012882	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	61786098	True	NA	24	True	AATAAA	-14	NA	61792910	61797238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61793029_61795340
WTC11_00012883	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	750.437745530804	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61811328	True	NA	21	True	AATAAA	-20	NA	61816255	61867354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
WTC11_00012884	chr11	+	1690	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	-1	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	801.568833626484	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	61811475	False	NA	NA	False	NA	NA	NA	61816402	61865957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
WTC11_00012885	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2625	junction_7	146.460461103557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	61814076	True	NA	57	True	AATAAA	-8	NA	61828279	61864221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
WTC11_00012886	chr11	+	3439	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	-355	7	-234	0	multi-exon	FALSE	canonical	3	2595	junction_10	148.402624110813	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTTCCTGTGTTTC	61827927	False	NA	14	True	AATAAA	-13	NA	61827944	61867347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
WTC11_00012887	chr11	+	762	5	FSM	ENSG00000134824.14	ENST00000521571.6	799	5	37	0	37	0	multi-exon	FALSE	canonical	3	2625	junction_4	171.380424786497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGATTCATCCCTG	61840145	False	NA	NA	False	NA	NA	NA	61840333	61863077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971
WTC11_00012888	chr11	+	5061	7	FSM	ENSG00000134824.14	ENST00000523235.5	5073	7	12	0	12	0	multi-exon	FALSE	canonical	3	2595	junction_5	137.219613110598	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTTCCTGTGTTTC	61854052	False	NA	14	True	AATAAA	-13	NA	61854198	61867347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
WTC11_00012890	chr11	+	1529	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	-98	266	-98	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTAATCCCAGCATT	61967676	False	NA	NA	False	AAGAAA	-32	NA	61967695	61969224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61967700_61969200
WTC11_00012892	chr11	+	1744	1	FSM	ENSG00000289194.1	ENST00000692570.1	1054	1	0	-690	0	690	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGTTGTTGTT	62153719	False	NA	NA	False	AATAAA	-15	NA	62153729	62155473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62153700_62155500
WTC11_00012895	chr11	+	2198	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	-16	0	-11	0	multi-exon	FALSE	canonical	3	195	junction_4	95.7717193237243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	62333112	True	NA	NA	False	AATAAA	-11	NA	62337436	62393406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
WTC11_00012896	chr11	+	2331	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	-67	6	-67	0	multi-exon	FALSE	canonical	3	80	junction_1	120.577314984573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	62337380	62393406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
WTC11_00012899	chr11	+	2129	7	NIC	ENSG00000162174.12	novel	2270	7	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	136.035126182746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAGAATAAGGGTG	62333148	True	NA	NA	False	AATAAA	-5	NA	62337472	62393400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
WTC11_00012901	chr11	+	641	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	-2	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	26.4196896272458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333168	True	NA	12	True	ATTAAA	-16	NA	62337492	62357201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
WTC11_00012903	chr11	+	828	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	34	0	-34	multi-exon	FALSE	canonical	1	3	junction_1	0.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGAGGCTGATTCTG	62611749	True	NA	-41	True	NA	NA	NA	62611785	62615066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62611921_62614257_62614505_62614620
WTC11_00012906	chr11	+	1874	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	53	0	-53	multi-exon	FALSE	canonical	3	914	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGCTGTTATTAAAGTCA	62660296	True	NA	65	True	NA	NA	NA	62671672	62673633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62671866_62671952
WTC11_00012912	chr11	+	1519	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	-131	-520	-59	520	multi-exon	FALSE	canonical	3	977	junction_1	81.6938730192717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGGCACTATACCTC	62750001	True	NA	-8	True	ATTAAA	-14	NA	62761505	62767230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
WTC11_00012913	chr11	+	1642	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	-81	-642	-66	605	multi-exon	FALSE	canonical	3	123	junction_2	439.576326635973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATCTCATTTCAATT	62749994	True	NA	77	True	NA	NA	NA	62761498	62767315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
WTC11_00012914	chr11	+	806	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	-15	0	0	0	multi-exon	FALSE	canonical	3	977	junction_2	75.6339196122901	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750060	True	NA	15	True	TATAAA	-17	NA	62761564	62766710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
WTC11_00012915	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	342.071832937015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750112	True	NA	15	True	TATAAA	-17	NA	62761616	62766710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
WTC11_00012920	chr11	+	2023	11	FSM	ENSG00000162227.8	ENST00000294168.8	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	21.7402851867219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62769594	True	NA	16	True	AATAAA	-16	NA	62771395	62787342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
WTC11_00012922	chr11	+	810	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	-13	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	170.411919249277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783358	True	NA	26	True	NA	NA	NA	62787401	62790246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
WTC11_00012924	chr11	+	1266	3	FSM	ENSG00000185475.11	ENST00000526546.1	400	3	-443	-423	-334	0	multi-exon	FALSE	canonical	3	356	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62784682	False	NA	26	True	NA	NA	NA	62788725	62790246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62789211_62789291_62789427_62789600
WTC11_00012927	chr11	+	2274	11	FSM	ENSG00000168003.18	ENST00000680729.1	2265	11	-9	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_3	771.981191480725	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841776	True	NA	46	True	AATAAA	-41	NA	62855994	62888880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012928	chr11	+	2202	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	-149	-60	-9	33	multi-exon	FALSE	canonical	3	139	junction_1	611.37903217861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTCCTCCAACTCCTT	62841776	True	NA	79	True	NA	NA	NA	62855994	62888913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012929	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	621.516487151912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	62841883	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012930	chr11	+	2231	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	-9	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	762.208166616049	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62841883	True	NA	26	True	AATAAA	-21	NA	62856101	62888860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012931	chr11	+	2299	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	-112	10	-5	0	multi-exon	FALSE	canonical	3	49	junction_2	716.324179808634	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTCATAGCAGGAA	62841780	True	NA	36	True	AATAAA	-31	NA	62855998	62888870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012932	chr11	+	2359	13	NIC	ENSG00000168003.18	novel	2334	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	195	junction_3	765.916589598516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	62841793	True	NA	28	True	TTTAAA	-35	NA	62856011	62888805	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62856382_62870744_62870838_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012934	chr11	+	2108	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	-24	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	573.772263184619	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	62841925	True	NA	41	True	AATAAA	-36	NA	62856143	62888875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012935	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	160.721333178815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	62873386	True	NA	28	True	TTTAAA	-35	NA	62880862	62888805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
WTC11_00012936	chr11	+	2843	7	FSM	ENSG00000168003.18	ENST00000681563.1	2843	7	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_4	162.197838730634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTCATAGCAGGAA	62873419	True	NA	36	True	AATAAA	-31	NA	62880895	62888870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62883000_62884456_62884526_62884631_62884691_62885176_62885609_62888134_62888219_62888330
WTC11_00012937	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	156.857369527224	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012939	chr11	+	2029	10	FSM	ENSG00000168003.18	ENST00000541425.6	2029	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	843.773900438813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62883988_62884113_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012941	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_1	161.620240195392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	62881136	True	NA	11	True	AATAAA	-6	NA	62881698	62888845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012943	chr11	+	2174	6	FSM	ENSG00000168003.18	ENST00000542922.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_2	164.730082255792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTCCCTCTGCTTCTC	62883310	False	NA	24	True	AATAAA	-19	NA	62883347	62888858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
WTC11_00012949	chr11	+	2580	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	-51	3	-1	0	multi-exon	FALSE	canonical	3	1800	junction_6	90.9183088760943	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	63659689	True	NA	31	True	AATAAA	-12	NA	63681448	63759882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
WTC11_00012951	chr11	+	4931	8	FSM	ENSG00000133318.14	ENST00000339997.8	4886	8	-51	6	-14	0	multi-exon	FALSE	canonical	3	10	junction_1	879.873181956656	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	NA	False	NA	34	True	AATAAA	-15	NA	63681431	63759885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63681779_63718701_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
WTC11_00012959	chr11	+	4564	19	FSM	ENSG00000072518.22	ENST00000402010.8	4547	19	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.6033032213869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCCTCCTGTTTCTT	63834546	True	NA	15	True	AATAAA	-20	NA	63839092	63911020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63906087_63906115_63908259_63908305_63908876
WTC11_00012968	chr11	+	3983	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	-270	-2755	-233	111	multi-exon	TRUE	canonical	3	24	junction_2	56.1129812669641	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGCCCCATGCTGGA	NA	False	NA	NA	False	NA	NA	NA	63938725	63957430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
WTC11_00012969	chr11	+	3692	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	-43	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	22.8749930299978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936449	True	NA	11	True	AATAAA	-15	NA	63938958	63957319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
WTC11_00012970	chr11	+	4707	7	FSM	ENSG00000110583.13	ENST00000338447.10	4707	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	18.9861060310487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936449	True	NA	11	True	AATAAA	-15	NA	63938958	63957319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63939103_63945839_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
WTC11_00012972	chr11	+	2831	6	FSM	ENSG00000167770.13	ENST00000301453.7	2493	6	-329	-9	-329	8	multi-exon	FALSE	canonical	3	2091	junction_4	170.720356138335	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGCCTGTGCCTCTGCC	63985447	False	NA	34	True	AATAAA	-26	NA	63985523	63998420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996942_63997049_63997245_63997348
WTC11_00012973	chr11	+	1655	7	FSM	ENSG00000167770.13	ENST00000543004.5	1647	7	-8	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	843.567507013451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCGGGGTCTCAGCCCCC	63963492	True	NA	-47	True	NA	NA	NA	63986437	63998339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988626_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
WTC11_00012974	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1801	junction_4	244.811775769785	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	63963492	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
WTC11_00012975	chr11	+	547	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	6	0	-6	multi-exon	FALSE	canonical	3	47	junction_3	1142.0710232828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAATGGGTGTGTGGAAA	63963523	True	NA	NA	False	AATAAA	-31	NA	63986468	63990626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
WTC11_00012976	chr11	+	1821	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	-562	0	0	multi-exon	FALSE	canonical	3	252	junction_1	739.587497640858	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	63986657	True	NA	26	True	AATAAA	-18	NA	63986841	63998412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
WTC11_00012988	chr11	+	938	5	NIC	ENSG00000110011.14	novel	1288	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	76.0637068515596	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTCGTGTCCGGCTCCC	64225311	False	NA	10	True	AATAAA	-10	NA	64230277	64234278	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64230320_64230431_64230941_64231870_64231965_64233893_64233981_64234072
WTC11_00012989	chr11	+	1288	7	FSM	ENSG00000110011.14	ENST00000321685.7	1288	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5111575304707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64225311	False	NA	13	True	AATAAA	-13	NA	64230277	64234281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64230320_64230431_64230941_64231870_64231965_64232429_64232615_64232703_64232866_64233893_64233981_64234072
WTC11_00012991	chr11	+	1192	5	ISM	ENSG00000110011.14	ENST00000628077.3	1130	6	34	-4	15	-1	intron_retention	FALSE	canonical	3	136	junction_3	24.4783067224839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCGGCTCCCTCCTTAA	64228776	True	NA	17	True	AATAAA	-17	NA	64230581	64234285	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232703_64232866_64233893
WTC11_00012993	chr11	+	814	6	NIC	ENSG00000110011.14	novel	1130	6	NA	NA	109	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	65.2423175554026	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64230853	False	NA	13	True	AATAAA	-13	NA	64230866	64234281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893_64233981_64234072
WTC11_00012998	chr11	+	1313	7	FSM	ENSG00000173511.10	ENST00000426086.3	1704	7	-86	477	-86	0	multi-exon	FALSE	canonical	3	62	junction_5	41.1366287172663	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCCTGCCTGTGTCAC	64232305	True	NA	21	True	GATAAA	-14	NA	64234497	64238787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237520_64237656_64238355
WTC11_00013000	chr11	+	1768	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	-142	29	-142	-29	multi-exon	FALSE	canonical	3	163	junction_1	445.521985989468	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	64240929	False	NA	-11	True	AAAACA	-10	NA	64240952	64244103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
WTC11_00013004	chr11	+	595	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	-21	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	224.085162382519	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226069	True	NA	18	True	AAAACA	-39	NA	64241073	64244132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
WTC11_00013005	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	493.549187011791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	64226151	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
WTC11_00013012	chr11	+	3946	29	FSM	ENSG00000149782.13	ENST00000325234.5	3946	29	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	89.9321385313189	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	64244611	True	NA	15	True	AATAAA	-16	NA	64251574	64267923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64251749_64254951_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
WTC11_00013014	chr11	+	1963	7	NIC	ENSG00000173264.15	novel	1843	7	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	72.0503296314458	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTTGTGCACCTGTC	NA	False	NA	11	True	AATAAA	-13	NA	64284796	64289488	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
WTC11_00013017	chr11	+	1536	7	NIC	ENSG00000173264.15	novel	1478	7	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	75.2462623656484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGTGCACCTGTCTG	64284476	False	NA	13	True	AATAAA	-15	NA	64285088	64289490	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289142
WTC11_00013021	chr11	+	2061	6	ISM	ENSG00000173264.15	ENST00000539851.5	1843	7	1019	10	-18	-1	3prime_fragment	FALSE	canonical	3	8	junction_5	67.7938050267132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGTGCACCTGTCTG	64285602	False	NA	13	True	AATAAA	-15	NA	64285829	64289490	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
WTC11_00013022	chr11	+	3176	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	-1013	3	24	0	multi-exon	FALSE	canonical	3	130	junction_6	26.8850433430105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64284222	True	NA	14	True	AATAAA	-16	NA	64284834	64289491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
WTC11_00013023	chr11	+	2075	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	-590	0	-18	0	multi-exon	FALSE	canonical	3	50	junction_6	52.2230791891861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64285602	False	NA	14	True	AATAAA	-16	NA	64285829	64289491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
WTC11_00013026	chr11	+	1397	6	FSM	ENSG00000182450.13	ENST00000538767.1	1389	6	-8	0	-8	0	multi-exon	TRUE	canonical	0	0	junction_1	1.85472369909914	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGCGAGTGGGTGTGGAA	64290351	False	NA	NA	False	AATAAA	-38	NA	64291316	64300028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64291567_64296877_64297002_64297118_64297280_64297614_64297654_64298109_64298250_64299345
WTC11_00013028	chr11	+	2282	7	FSM	ENSG00000173153.17	ENST00000406310.6	2293	7	11	0	11	0	multi-exon	FALSE	canonical	3	63	junction_4	128.464867657357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTGTTTGGTGT	64301996	True	NA	18	True	AATATA	-14	NA	64305507	64316738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64305737_64307167_64307505_64313950_64314068_64314238_64314368_64314743_64314912_64315000_64315271_64315706
WTC11_00013030	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	129.851196888336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	64305916	True	NA	23	True	AATATA	-19	NA	64306226	64316743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
WTC11_00013031	chr11	+	3776	5	ISM	ENSG00000173153.17	ENST00000405666.5	2283	7	5770	-98	-1774	98	3prime_fragment	FALSE	canonical	3	374	junction_2	24.5865817062885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCGCCTGGCACAAT	64311879	False	NA	121	True	AATACA	-16	NA	64311996	64316841	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
WTC11_00013033	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	1468.75551062796	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	64291324	True	NA	-53	True	NA	NA	NA	64318181	64321740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
WTC11_00013037	chr11	+	3102	5	FSM	ENSG00000168071.22	ENST00000479965.5	3102	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	9.67923034130297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTCTTGCTCTGTCT	64352844	False	NA	7	True	AATAAA	-15	NA	64352885	64357528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193
WTC11_00013038	chr11	+	3148	17	FSM	ENSG00000162302.13	ENST00000334205.9	3128	17	-20	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_7	10.298475311909	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	64358236	True	NA	25	True	AATAAA	-26	NA	64359141	64372215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368467_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
WTC11_00013039	chr11	+	3127	17	FSM	ENSG00000162302.13	ENST00000528057.5	3121	17	-6	0	-6	0	multi-exon	FALSE	canonical	2	11	junction_10	13.7111667537814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	64358236	True	NA	25	True	AATAAA	-26	NA	64359141	64372215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368488_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
WTC11_00013042	chr11	+	1480	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	-729	44	-697	0	multi-exon	FALSE	canonical	3	174	junction_3	1673.59553058677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCTACCGAGGCTGT	NA	False	NA	-49	True	NA	NA	NA	65013462	65022116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
WTC11_00013044	chr11	+	850	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	-20	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1342.06944678731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987819	True	NA	19	True	AATAAA	-17	NA	65014159	65022184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
WTC11_00013048	chr11	+	1366	3	FSM	ENSG00000168061.17	ENST00000531072.1	1362	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_1	73.5	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAAAAGGAACTTGTT	NA	False	NA	-13	True	NA	NA	NA	65040896	65044799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65041107_65041285_65041867_65044224
WTC11_00013052	chr11	+	2570	7	FSM	ENSG00000162300.13	ENST00000650243.1	2551	7	-19	0	-19	0	multi-exon	TRUE	canonical	3	10	junction_1	89.7063109386526	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTATTAAAACACCCGA	65081964	True	NA	NA	False	AATAAA	-5	NA	65084190	65088385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65084361_65084690_65084801_65085114_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
WTC11_00013053	chr11	+	488	2	FSM	ENSG00000162300.13	ENST00000525509.1	478	2	-19	9	-6	0	multi-exon	FALSE	canonical	3	284	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	65081977	True	NA	NA	False	AATAAA	-16	NA	65084203	65085003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65084379_65084690
WTC11_00013054	chr11	+	1394	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	-12	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	22.1082679150602	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65081983	True	NA	NA	False	AATAAA	-18	NA	65084209	65088398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
WTC11_00013056	chr11	+	2680	10	FSM	ENSG00000149823.9	ENST00000279281.8	2661	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	399	junction_3	32.7847450222331	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTCCTTGTCTGCGTTCC	65088747	True	NA	27	True	NA	NA	NA	65096194	65111862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326
WTC11_00013057	chr11	+	1027	4	FSM	ENSG00000149823.9	ENST00000529180.1	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_2	14.6590889515307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGGGCGGCCTCTGC	65088779	True	NA	NA	False	NA	NA	NA	65096226	65108399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65096479_65096997_65097128_65107580_65108023_65108196
WTC11_00013063	chr11	+	1583	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	-5	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	42.2859168687649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65103996	True	NA	20	True	AATGAA	-15	NA	65111866	65116230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00013065	chr11	+	1682	9	FSM	ENSG00000149809.17	ENST00000529601.5	1671	9	-11	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	157.867032657233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAGCAACAGGGCTG	65103996	True	NA	NA	False	NA	NA	NA	65111866	65116384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112068_65112514_65112712_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00013066	chr11	+	1372	9	NIC	ENSG00000149809.17	novel	1578	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	158.326354012843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104012	True	NA	20	True	AATGAA	-15	NA	65111882	65116230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65112068_65112514_65112712_65112810_65112866_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00013067	chr11	+	1535	10	NIC	ENSG00000149809.17	novel	1578	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_3	184.001274821134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104013	True	NA	20	True	AATGAA	-15	NA	65111883	65116230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65112068_65112514_65112712_65112810_65112866_65113368_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115774
WTC11_00013068	chr11	+	1366	9	NIC	ENSG00000149809.17	novel	1671	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_2	153.722914280858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTTCCTCCTTTGGA	65104014	True	NA	25	True	AATGAA	-20	NA	65111884	65116235	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65112068_65112514_65112712_65113368_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00013070	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	38.3804797324082	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104031	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00013082	chr11	+	2021	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	-10	15	0	0	multi-exon	FALSE	canonical	3	731	junction_2	38.8415584994561	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	65116852	True	NA	19	True	ATTAAA	-29	NA	65122310	65127356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
WTC11_00013083	chr11	+	607	5	FSM	ENSG00000014216.16	ENST00000529133.5	593	5	-14	0	-14	0	multi-exon	FALSE	canonical	1	3	junction_1	324.53919254845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGCCTATGCCAAGTG	65180995	True	NA	NA	False	NA	NA	NA	65181022	65186033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65181056_65182700_65182969_65183127_65183198_65183473_65183593_65185916
WTC11_00013085	chr11	+	582	5	FSM	ENSG00000014216.16	ENST00000527739.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	321.512830226105	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTGGATGACCTGCTGC	65181635	True	NA	NA	False	NA	NA	NA	65181686	65185945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65181783_65182700_65182969_65183127_65183198_65183473_65183593_65185916
WTC11_00013086	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	172.337510969246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65181683	False	NA	16	True	AATAAA	-17	NA	65181744	65212001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
WTC11_00013089	chr11	+	3130	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	-183	5	0	0	multi-exon	FALSE	canonical	3	410	junction_1	99.291047019057	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65181683	False	NA	16	True	AATAAA	-17	NA	65181744	65212001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
WTC11_00013092	chr11	+	3096	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	-10	0	-1	0	multi-exon	FALSE	canonical	3	726	junction_1	53.0319714889047	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	65180060	True	NA	2	True	AATAAA	-3	NA	65182451	65211987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
WTC11_00013100	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	11.4894264615439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	65260247	True	NA	11	True	AGTAAA	-21	NA	65261961	65298685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
WTC11_00013104	chr11	+	1980	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	87	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	65312717	True	NA	6	True	AATAAA	-15	NA	65314848	65322417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65314955_65320543
WTC11_00013118	chr11	+	8705	1	FSM	ENSG00000251562.9	ENST00000534336.1	8708	1	63	-60	57	13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTGTTCTGTTAAATC	65497770	True	NA	69	True	AATAAA	-36	NA	65497824	65506529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65497800_65506500
WTC11_00013120	chr11	+	2585	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	-2	0	0	0	multi-exon	FALSE	canonical	3	143	junction_13	77.4220447313336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522193	True	NA	14	True	AATAAA	-13	NA	65525082	65538704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
WTC11_00013121	chr11	+	2578	17	FSM	ENSG00000142186.18	ENST00000525364.5	2584	17	6	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	136.81579769895	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522193	True	NA	14	True	AATAAA	-13	NA	65525082	65538704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537811_65537881_65537966_65538183_65538441
WTC11_00013122	chr11	+	2724	17	FSM	ENSG00000142186.18	ENST00000524944.5	2715	17	-9	0	0	0	multi-exon	FALSE	canonical	3	246	junction_13	56.7417394869068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522222	True	NA	14	True	AATAAA	-13	NA	65525111	65538704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269
WTC11_00013123	chr11	+	2600	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	-14	0	-14	0	multi-exon	FALSE	canonical	3	246	junction_12	58.9634089393583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	65522509	False	NA	-15	True	NA	NA	NA	65525398	65538675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
WTC11_00013129	chr11	+	712	4	FSM	ENSG00000173465.8	ENST00000309328.8	769	4	-63	120	-46	0	multi-exon	FALSE	canonical	3	756	junction_1	129.68251831128	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCCTCTGTGTGGTTT	NA	False	NA	16	True	AAAACA	-1	NA	65570413	65571768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65570511_65570603_65570756_65570885_65570971_65571390
WTC11_00013130	chr11	+	879	3	FSM	ENSG00000173465.8	ENST00000531405.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_2	61	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	65559249	True	NA	NA	False	NA	NA	NA	65570459	65571888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65570756_65570885_65570971_65571390
WTC11_00013131	chr11	+	1406	2	FSM	ENSG00000176973.8	ENST00000316409.2	1409	2	0	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTGGCTGGCTCTG	65572309	False	NA	17	True	AATAAA	-19	NA	65572348	65574195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573401
WTC11_00013132	chr11	+	1337	2	FSM	ENSG00000176973.8	ENST00000449319.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	65572422	False	NA	12	True	AATAAA	-14	NA	65572461	65574190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573352
WTC11_00013133	chr11	+	1251	2	FSM	ENSG00000176973.8	ENST00000530349.2	1251	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	65572003	True	NA	12	True	AATAAA	-14	NA	65572537	65574190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573362
WTC11_00013135	chr11	+	769	3	FSM	ENSG00000173442.13	ENST00000533364.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGACCCGGCCGTCCCG	65591372	False	NA	NA	False	NA	NA	NA	65591388	65592371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65591874_65591975_65592091_65592202
WTC11_00013142	chr11	+	3509	16	FSM	ENSG00000213445.10	ENST00000534313.6	3499	16	-10	0	-10	0	multi-exon	TRUE	canonical	3	70	junction_1	59.894574044733	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGTCTGAACA	65636667	True	NA	10	True	AGTAAA	-8	NA	65638090	65650912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65638183_65640830_65641601_65642249_65642378_65642462_65642640_65644954_65645130_65645853_65645958_65646220_65646379_65646455_65647066_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
WTC11_00013146	chr11	+	2311	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	-232	1	2	0	multi-exon	FALSE	canonical	3	88	junction_4	97.2358244452915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	65711881	True	NA	22	True	AATAAA	-16	NA	65712019	65719603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
WTC11_00013147	chr11	+	2399	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	12	-174	-10	174	multi-exon	TRUE	canonical	3	88	junction_5	98.7564693409317	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCAGTCCTCGGGCACC	65711869	True	NA	NA	False	NA	NA	NA	65712007	65719778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
WTC11_00013148	chr11	+	2146	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	-209	-240	12	0	multi-exon	FALSE	canonical	3	233	junction_3	42.1486938907271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711891	True	NA	23	True	AATAAA	-17	NA	65712029	65719604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
WTC11_00013153	chr11	+	3037	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	-49	0	-49	0	multi-exon	FALSE	canonical	3	25	junction_1	1.69967317119759	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	65786465	True	NA	22	True	ATTAAA	-14	NA	65787013	65797214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
WTC11_00013162	chr11	+	963	1	FSM	ENSG00000175602.4	ENST00000312579.4	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGGCCTGGGCAGCGT	65884592	True	NA	8	True	AATAAA	-17	NA	65890672	65891635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65890700_65891600
WTC11_00013163	chr11	+	913	7	FSM	ENSG00000175550.8	ENST00000525501.5	695	7	-42	-176	-42	14	multi-exon	TRUE	canonical	3	162	junction_3	634.460838472758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGTTGCCATCCCAT	65919162	True	NA	44	True	AATAAA	-38	NA	65919231	65921577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65919544_65919779_65919853_65919947_65919998_65920415_65920463_65920568_65920663_65920883_65920973_65921329
WTC11_00013165	chr11	+	683	5	FSM	ENSG00000175550.8	ENST00000531121.5	672	5	-11	0	0	0	multi-exon	FALSE	canonical	3	1770	junction_3	89.9065487047523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGCCCAGAGGCATG	65906492	True	NA	NA	False	NA	NA	NA	65919425	65920972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65919544_65919779_65920042_65920342_65920463_65920568_65920663_65920883
WTC11_00013166	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_5	223.170248913246	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	65919534	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
WTC11_00013167	chr11	+	837	3	FSM	ENSG00000175550.8	ENST00000530791.5	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_2	183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGTGTCTGTTCCAG	65920118	False	NA	11	True	AATAAA	-5	NA	65920129	65921544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65920663_65920883_65920973_65921329
WTC11_00013172	chr11	+	900	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	-187	18	0	0	multi-exon	FALSE	canonical	3	2816	junction_1	579	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	66002209	False	NA	11	True	NA	NA	NA	66002315	66004131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66002571_66003234_66003374_66003625
WTC11_00013173	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1970	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	66002519	False	NA	11	True	NA	NA	NA	66002580	66004131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66003071_66003234_66003374_66003625
WTC11_00013175	chr11	+	777	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	-191	6	-191	-6	multi-exon	FALSE	canonical	3	22	junction_1	1	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATTGGTTTCTTCCAA	66011804	False	NA	6	True	AATAAA	-16	NA	66011816	66013499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66012285_66012825_66012952_66013316
WTC11_00013193	chr11	+	3755	13	FSM	ENSG00000174996.12	ENST00000394065.2	3755	13	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_5	27.2380197926028	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	66260898	False	NA	5	True	AATAAA	-16	NA	66260912	66267859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432
WTC11_00013205	chr11	+	2800	8	FSM	ENSG00000174516.15	ENST00000320740.12	2704	8	-60	-36	-60	36	multi-exon	FALSE	canonical	2	28	junction_3	9.60654538768824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCATAGTAACCCAAGAA	66466441	True	NA	50	True	NA	NA	NA	66466844	66477373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66467028_66468127_66468281_66468832_66468905_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
WTC11_00013206	chr11	+	1690	7	FSM	ENSG00000174516.15	ENST00000524466.5	1671	7	-19	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	10.3762549441823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAGCCTACTCTTCTTG	66466501	True	NA	NA	False	AAAACA	-16	NA	66466904	66474651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66467028_66468127_66468281_66468832_66468905_66471241_66471372_66472368_66472471_66473240_66473436_66473736
WTC11_00013217	chr11	+	602	9	FSM	ENSG00000174483.20	ENST00000525809.5	601	9	-1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	25.4803846124818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATCGAGCTGAGCGCC	66508279	True	NA	NA	False	NA	NA	NA	66510634	66523475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455
WTC11_00013226	chr11	+	1206	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	141	junction_3	15.0517625398342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	66589760	True	NA	-87	True	NA	NA	NA	66593142	66605912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
WTC11_00013227	chr11	+	1230	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	-16	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	52.6358301183224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	66589802	True	NA	-1	True	NA	NA	NA	66593184	66605998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
WTC11_00013228	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	27.0735958423837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	66589802	True	NA	20	True	AATGAA	-21	NA	66593184	66606019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
WTC11_00013230	chr11	+	5207	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	-4	164	0	-164	multi-exon	FALSE	canonical	3	419	junction_2	24.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGTAGTGCTTCAAA	66615290	True	NA	NA	False	TTTAAA	-8	NA	66616625	66629770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66624213_66625679_66626460
WTC11_00013232	chr11	+	1442	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	-16	0	-16	0	multi-exon	FALSE	canonical	2	8	junction_2	230	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	66615274	True	NA	23	True	AATAAA	-27	NA	66616609	66627343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66624213_66624325_66626460
WTC11_00013234	chr11	+	1923	2	FSM	ENSG00000173933.21_ENSG00000248643.5	ENST00000483858.5	1548	2	-149	-226	-118	226	multi-exon	FALSE	canonical	3	602	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTCAGGTCTAGTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	66638548	66641418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699
WTC11_00013235	chr11	+	1768	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	-5	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	184.083918061543	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	66624585	True	NA	4	True	NA	NA	NA	66638666	66646452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
WTC11_00013236	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	66624585	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66665855
WTC11_00013237	chr11	+	1033	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	-22	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	66624616	True	NA	-9	True	NA	NA	NA	66638697	66646439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638894_66639699_66640124_66646026
WTC11_00013238	chr11	+	1612	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	-5	0	0	0	multi-exon	FALSE	canonical	3	474	junction_3	60.1054628687498	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624616	True	NA	20	True	AATAAA	-16	NA	66638697	66646468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
WTC11_00013239	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	197	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624616	True	NA	20	True	AATAAA	-16	NA	66638697	66646468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66646026
WTC11_00013240	chr11	+	674	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	-20	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	290	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	66624616	True	NA	3	True	AATAAA	-18	NA	66638697	66649930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66649735
WTC11_00013241	chr11	+	2321	3	FSM	ENSG00000173933.21	ENST00000409406.1	2321	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66624853	False	NA	19	True	AATAAA	-15	NA	66638934	66646467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66640124_66643449_66644141_66646026
WTC11_00013242	chr11	+	1998	15	FSM	ENSG00000173715.18	ENST00000540737.7	1998	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	50.6383737689036	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTCGGCGGCGCTGGGC	66742841	True	NA	NA	False	NA	NA	NA	66744768	66843516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
WTC11_00013243	chr11	+	2135	17	FSM	ENSG00000173715.18	ENST00000525908.6	2135	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	53.5465626814644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGCGTCTGCTTCCGC	66742808	True	NA	32	True	AATAAA	-24	NA	66744735	66843328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
WTC11_00013245	chr11	+	1734	16	FSM	ENSG00000173715.18	ENST00000642265.1	1734	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.2990075620377	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCCCTTCCGCAAG	66742962	False	NA	-62	True	NA	NA	NA	66744889	66843234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
WTC11_00013246	chr11	+	3233	22	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	3010	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	166.263866998779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	66742962	False	NA	10	True	ATTAAA	-19	NA	66744889	66846526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
WTC11_00013251	chr11	+	2711	5	FSM	ENSG00000173653.8	ENST00000533277.5	2719	5	0	8	0	-8	multi-exon	FALSE	canonical	3	339	junction_1	62.0906595229911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTAACATGGCCTTGGG	NA	False	NA	2	True	ATTAAA	-11	NA	66842834	66846518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165
WTC11_00013252	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	156.285707031136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66838576	True	NA	12	True	ATTAAA	-21	NA	66843436	66846528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
WTC11_00013253	chr11	+	1466	8	FSM	ENSG00000173653.8	ENST00000309657.8	1462	8	-4	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	56.6038867923396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGGGATCTTGTGTG	66838576	True	NA	36	True	ATTAAA	-45	NA	66843436	66846552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
WTC11_00013254	chr11	+	1442	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	-14	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	128.153288315683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	66838576	True	NA	16	True	ATTAAA	-25	NA	66843436	66846532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
WTC11_00013262	chr11	+	6517	21	FSM	ENSG00000173120.15	ENST00000398645.6	6511	21	-6	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	27.2976189437834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAAGGGTTTGGTTGT	67116990	True	NA	6	True	AATAAA	-18	NA	67119262	67257665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67120050_67121233_67121359_67180078_67180218_67181319_67181399_67181845_67181893_67207509_67207689_67215339_67215447_67215855_67215950_67217730_67217885_67219287_67219404_67228036_67228164_67231565_67231961_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250347_67252693_67252858_67253452_67253612_67254202_67254419_67254873
WTC11_00013269	chr11	+	4493	17	FSM	ENSG00000173020.11	ENST00000416281.6	4493	17	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_13	42.8193881320133	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTGTCTCAGACTCT	67276522	False	NA	14	True	TATAAA	-13	NA	67276536	67286555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67277349_67279199_67279274_67279417_67279520_67279625_67279701_67279838_67279901_67280731_67281185_67281458_67281559_67281649_67281729_67281821_67282543_67282751_67282819_67283127_67283229_67283706_67283774_67283853_67283950_67284210_67284374_67284846_67284984_67285074_67285189_67285285
WTC11_00013270	chr11	+	3399	6	FSM	ENSG00000173020.11	ENST00000533077.5	3453	6	54	0	54	0	multi-exon	FALSE	canonical	3	544	junction_5	31.5315714800262	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACCAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	67280247	67284622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67281185_67281458_67281559_67281649_67281729_67281821_67282543_67282751_67282819_67283127
WTC11_00013285	chr11	+	2768	8	FSM	ENSG00000172932.16	ENST00000512231.5	2768	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	7.61309291112813	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	67297064	False	NA	6	True	AATAAA	-15	NA	67297932	67302483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
WTC11_00013287	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	13.3292400028379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300974	True	NA	9	True	AATAAA	-14	NA	67303529	67312592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
WTC11_00013293	chr11	+	2528	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	-442	0	-161	0	multi-exon	FALSE	canonical	3	96	junction_10	11.2338773359869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	67391543	67398410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
WTC11_00013302	chr11	+	1827	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	-21	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	164.869591563218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	67422101	True	NA	-34	True	NA	NA	NA	67428482	67435344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
WTC11_00013303	chr11	+	1752	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	-19	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_9	110.976739611028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422093	True	NA	23	True	ATTAAA	-14	NA	67428474	67435401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
WTC11_00013304	chr11	+	1680	14	NIC	ENSG00000175634.15	novel	1733	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	151.03916181695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422124	True	NA	23	True	ATTAAA	-14	NA	67428505	67435401	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_67428624_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
WTC11_00013309	chr11	+	1045	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	-15	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	95.1981486164516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	67480698	True	NA	13	True	TATAAA	-17	NA	67483025	67491101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
WTC11_00013310	chr11	+	1186	6	FSM	ENSG00000110711.11	ENST00000683237.1	1186	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	92.9442843858621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTCTGCTGAGCTGCT	67480740	True	NA	15	True	TATAAA	-19	NA	67483067	67491103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490450_67490787
WTC11_00013311	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	5.78791845139511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	67480854	False	NA	-91	True	NA	NA	NA	67483181	67490997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
WTC11_00013312	chr11	+	1919	4	FSM	ENSG00000110711.11	ENST00000529797.2	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	5.35412613473634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAGGCCTTTATTTA	67480901	False	NA	-11	True	NA	NA	NA	67483228	67491077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67489266_67490215_67490315
WTC11_00013313	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5142.2341992562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	67389968	True	NA	46	True	AATAAA	-20	NA	67583741	67586656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
WTC11_00013315	chr11	+	1694	3	FSM	ENSG00000084207.18	ENST00000494593.1	1681	3	-10	-3	0	0	multi-exon	FALSE	canonical	3	6807	junction_1	2799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	67390038	True	NA	46	True	AATAAA	-20	NA	67583811	67586656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67583845_67584133_67585242_67586103
WTC11_00013317	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5532.13229121466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	67584453	False	NA	-6	True	NA	NA	NA	67584463	67586604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
WTC11_00013318	chr11	+	736	3	FSM	ENSG00000084207.18	ENST00000467591.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	12405	junction_1	205.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGAGGGTTGGGGGGA	67584747	False	NA	-41	True	NA	NA	NA	67584794	67586569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67585242_67586103_67586212_67586388
WTC11_00013323	chr11	+	1556	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	-9	13	0	6	multi-exon	TRUE	canonical	3	888	junction_1	84.5683301782399	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTGACTGTGCTCTT	67595032	True	NA	32	True	AATAAA	-28	NA	67606926	67612541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
WTC11_00013331	chr11	+	1748	7	FSM	ENSG00000167792.13	ENST00000526770.5	1748	7	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_1	58.9559628498726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	67596643	False	NA	19	True	AATAAA	-15	NA	67608537	67612528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67608723_67609451_67609636_67610380_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
WTC11_00013339	chr11	+	786	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	-49	0	49	multi-exon	FALSE	canonical	0	0	junction_6	1066.02857216243	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGAGGCCTGTGGTGCC	68008084	True	NA	64	True	NA	NA	NA	68030680	68036693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
WTC11_00013341	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1316.16455615888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	68008146	True	NA	NA	False	NA	NA	NA	68030742	68036514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
WTC11_00013346	chr11	+	2685	20	FSM	ENSG00000110719.10	ENST00000265686.8	2668	20	-17	0	-17	0	multi-exon	TRUE	canonical	3	51	junction_5	19.3155743570411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037431	True	NA	7	True	AATAAA	-18	NA	68039007	68050895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
WTC11_00013350	chr11	+	2457	15	FSM	ENSG00000110719.10	ENST00000532635.5	2457	15	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	11.5749553708312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68042949	False	NA	7	True	AATAAA	-18	NA	68042979	68050895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
WTC11_00013366	chr11	+	4309	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	-17	0	0	0	multi-exon	FALSE	canonical	3	27	junction_15	164.46114105987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	68446614	True	NA	-5	True	NA	NA	NA	68460737	68614575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
WTC11_00013368	chr11	+	5086	24	FSM	ENSG00000110075.15	ENST00000393800.7	5072	24	-14	0	0	0	multi-exon	FALSE	canonical	3	331	junction_15	115.55064193098	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTACCTTGCTTGGA	68446614	True	NA	17	True	AATAAA	-24	NA	68460737	68615334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
WTC11_00013371	chr11	+	4794	23	FSM	ENSG00000110075.15	ENST00000265636.9	4794	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	245.127918199849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGAGACTAACAGATGT	68446689	True	NA	45	True	NA	NA	NA	68460812	68615252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68505144_68505250_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
WTC11_00013373	chr11	+	4862	22	FSM	ENSG00000110075.15	ENST00000527403.6	4862	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	164.564235953934	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTCTTTGTTTCTA	68519473	True	NA	-7	True	AATACA	-29	NA	68519505	68615310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
WTC11_00013378	chr11	+	749	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_3	97.7404726814844	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68664268	True	NA	14	True	AATAAA	-13	NA	68684543	68691175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
WTC11_00013380	chr11	+	479	4	FSM	ENSG00000132740.10	ENST00000544541.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	31.4783876475414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGCGGTTTTATTTG	68901737	True	NA	NA	False	NA	NA	NA	68903890	68911479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68904039_68908144_68908338_68908533_68908632_68911439
WTC11_00013381	chr11	+	3933	15	FSM	ENSG00000132740.10	ENST00000255078.8	3914	15	-19	0	9	0	multi-exon	FALSE	canonical	3	63	junction_3	12.195892583914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	68901718	True	NA	19	True	ATTAAA	-19	NA	68903871	68940601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
WTC11_00013382	chr11	+	3740	14	NIC	ENSG00000132740.10	novel	3914	15	NA	NA	4	0	intron_retention	FALSE	canonical	1	5	junction_1	22.4860245880669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	68901741	True	NA	19	True	ATTAAA	-19	NA	68903894	68940601	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68904039_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
WTC11_00013388	chr11	+	2177	14	FSM	ENSG00000162341.18	ENST00000535009.5	2175	14	-2	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	19.4881241336492	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGCTGTGTACCGAT	69046947	True	NA	3	True	ATTAAA	-16	NA	69048931	69079847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69049107_69054032_69054098_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891
WTC11_00013390	chr11	+	435	2	FSM	ENSG00000162341.18	ENST00000534832.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGGAGGGTCAGCCTT	69047045	False	NA	NA	False	NA	NA	NA	69049029	69054390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69049107_69054032
WTC11_00013397	chr11	+	442	4	FSM	ENSG00000131620.18	ENST00000529636.5	550	4	108	0	108	0	multi-exon	FALSE	canonical	3	13	junction_1	0.471404520791032	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCATCAATGTAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	70165469	70180045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70165571_70167241_70167388_70170886_70171040_70180003
WTC11_00013398	chr11	+	1708	2	FSM	ENSG00000168040.5	ENST00000301838.5	1708	2	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTCCTGTTGGTGG	70198004	True	NA	28	True	ATTAAA	-33	NA	70203295	70207390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70203746_70206132
WTC11_00013399	chr11	+	6546	28	FSM	ENSG00000131626.19	ENST00000253925.12	5240	28	-8	-1298	-8	382	multi-exon	FALSE	canonical	0	0	junction_14	57.3553168687425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	70265830	True	NA	NA	False	NA	NA	NA	70270681	70385694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
WTC11_00013400	chr11	+	4133	26	FSM	ENSG00000131626.19	ENST00000389547.7	4133	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	56.3830329088459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCAGAGAAAATAACTGA	70265865	True	NA	NA	False	NA	NA	NA	70270716	70378580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029
WTC11_00013407	chr11	+	3036	7	FSM	ENSG00000131626.19	ENST00000531657.1	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	15.1620872207255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAGAATACTGAGAATA	70371316	False	NA	76	True	AATAAA	-24	NA	70371326	70384394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
WTC11_00013412	chr11	+	3163	18	NNC	ENSG00000085733.16	novel	3249	18	NA	NA	0	46978	intron_retention	FALSE	non_canonical	0	0	junction_17	81.1204410217122	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGGTGTGGTGGCATG	70372051	True	NA	NA	False	NA	NA	NA	70398528	70483562	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70436573_70483534
WTC11_00013420	chr11	+	774	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	18	0	18	0	multi-exon	FALSE	canonical	3	150	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	71446954	True	NA	6	True	AATAAA	-19	NA	71448579	71452157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71448886_71451689
WTC11_00013422	chr11	+	2853	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	1	-1891	1	0	multi-exon	FALSE	canonical	3	155	junction_2	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTCTTATTTATTTGC	71451484	False	NA	22	True	AATAAA	-31	NA	71453109	71460947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71453382_71455109_71455171_71458427
WTC11_00013423	chr11	+	2676	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	-5	8	-5	-8	multi-exon	FALSE	canonical	3	118	junction_10	14.6876648926914	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCTGGGAGTCTGGG	71450876	True	NA	NA	False	NA	NA	NA	71453197	71501808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
WTC11_00013427	chr11	+	3749	5	FSM	ENSG00000158483.18	ENST00000691262.1	2322	5	1	-1428	1	1428	multi-exon	FALSE	canonical	3	37	junction_2	21.3190056053278	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTCACAGCACACGCA	71785847	True	NA	NA	False	NA	NA	NA	71787481	71802861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71787633_71789782_71789846_71791735_71791820_71796016_71796167_71799560
WTC11_00013428	chr11	+	2024	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	15	5	4	1	multi-exon	FALSE	canonical	3	61	junction_2	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	71785861	True	NA	NA	False	AATAAA	-18	NA	71787495	71801234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
WTC11_00013435	chr11	+	2298	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	-16	0	-2	0	multi-exon	FALSE	canonical	3	199	junction_2	19.3067345763078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922983	True	NA	24	True	AATAAA	-29	NA	71929029	71997597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
WTC11_00013436	chr11	+	2396	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	-21	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_3	102.650423160355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	71922983	True	NA	22	True	AATAAA	-27	NA	71929029	71997595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
WTC11_00013437	chr11	+	2136	7	FSM	ENSG00000137522.18	ENST00000393713.7	2132	7	-4	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_5	89.6121271554991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922983	True	NA	24	True	AATAAA	-29	NA	71929029	71997597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
WTC11_00013439	chr11	+	1066	8	NIC	ENSG00000137522.18	novel	2282	9	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	76.2364742101837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTTGATGAATAT	71923029	True	NA	-3	True	TTTAAA	-3	NA	71929075	71996519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71990596_71990718_71994718_71994853_71995449_71995552_71996194
WTC11_00013440	chr11	+	2208	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	-6	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	58.5752611986476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	71923029	True	NA	18	True	AATAAA	-23	NA	71929075	71997591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
WTC11_00013444	chr11	+	4080	4	FSM	ENSG00000137496.18	ENST00000497194.6	4080	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2.82842712474619	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGACACCTCTTACCCC	71998601	False	NA	NA	False	NA	NA	NA	71998612	72003753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72000013_72000350_72000558_72001200_72001325_72001404
WTC11_00013445	chr11	+	2172	5	FSM	ENSG00000137496.18	ENST00000404792.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.89711431702997	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATCCTGACATCTGTTC	71999051	False	NA	3	True	CATAAA	-15	NA	71999062	72002526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72000013_72000350_72000558_72001200_72001325_72001404_72001553_72001783
WTC11_00013446	chr11	+	2649	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-527	7	-14	-7	multi-exon	FALSE	canonical	3	22	junction_3	5.25357021462548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAACATTTGCTTGCTG	NA	False	NA	0	True	GATAAA	-14	NA	72080322	72096888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
WTC11_00013447	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.121728296285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	72080576	False	NA	-36	True	NA	NA	NA	72080665	72096852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
WTC11_00013448	chr11	+	288	2	FSM	ENSG00000184154.16	ENST00000537483.1	308	2	0	20	0	-20	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCCCATATGCTTGCA	72088079	False	NA	NA	False	AAGAAA	-28	NA	72088323	72089259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72088381_72089028
WTC11_00013452	chr11	+	4871	28	FSM	ENSG00000165458.15	ENST00000298229.7	4789	28	-124	42	-124	0	multi-exon	FALSE	canonical	3	238	junction_4	35.6789525395714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	72224610	False	NA	NA	False	AATAAA	-17	NA	72224642	72239105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
WTC11_00013463	chr11	+	653	1	FSM	ENSG00000244134.1	ENST00000464109.1	380	1	192	-465	192	465	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGTCTCAAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	72708377	72709030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72708400_72709000
WTC11_00013466	chr11	+	1408	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	-8	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	19.3506144861535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	72822220	True	NA	-22	True	NA	NA	NA	72822430	72829598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
WTC11_00013468	chr11	+	8038	21	FSM	ENSG00000110237.5	ENST00000263674.4	8163	21	-2	127	-2	-127	multi-exon	TRUE	canonical	3	12	junction_19	3.17175030543074	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTCCTCATCAGGAA	73307951	True	NA	-39	True	NA	NA	NA	73308273	73369261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73311831_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
WTC11_00013471	chr11	+	3355	11	FSM	ENSG00000054967.13	ENST00000064780.7	3402	11	0	47	0	-47	multi-exon	FALSE	canonical	3	23	junction_3	5.40740233383831	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGGGGCCTAACACA	73375967	True	NA	NA	False	NA	NA	NA	73376398	73397427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73376500_73389111_73389182_73390550_73390626_73390754_73390922_73391143_73391224_73392210_73392469_73393836_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
WTC11_00013473	chr11	+	1968	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	48	0	-12	0	multi-exon	FALSE	canonical	3	65	junction_6	6.42910050732864	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73647050	True	NA	19	True	AATAAA	-24	NA	73647596	73662819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
WTC11_00013478	chr11	+	1009	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	-5	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	173.563208947058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	73784518	True	NA	-72	True	NA	NA	NA	73787871	73864515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
WTC11_00013481	chr11	+	664	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	-3	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	153.462699050942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	73784552	True	NA	15	True	AATAAA	-17	NA	73787905	73864602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
WTC11_00013482	chr11	+	1058	8	FSM	ENSG00000175581.14	ENST00000398483.7	1058	8	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	184.623721031039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	73784552	True	NA	18	True	AATAAA	-20	NA	73787905	73864605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73787993_73789334_73789491_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
WTC11_00013484	chr11	+	889	9	FSM	ENSG00000175575.13	ENST00000543814.5	882	9	-7	0	5	0	multi-exon	FALSE	canonical	3	67	junction_2	242.374677668687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGGACTACAGAGCAG	73871616	True	NA	NA	False	AAGAAA	-7	NA	73876984	73914477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878778_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412
WTC11_00013486	chr11	+	4969	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	-24	9	1	-9	multi-exon	FALSE	canonical	1	87	junction_8	164.383144457752	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAGGATAAGGA	73871606	True	NA	NA	False	ATTAAA	-9	NA	73876974	73931105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
WTC11_00013487	chr11	+	805	8	FSM	ENSG00000175575.13	ENST00000546039.5	805	8	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_4	257.579312136702	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAGATGGAAACATTTA	73873408	False	NA	NA	False	NA	NA	NA	73878776	73916616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900310_73900421_73909398_73909594_73914412_73914505_73916544
WTC11_00013499	chr11	+	3623	4	FSM	ENSG00000077514.9	ENST00000530163.1	1055	4	-808	-1760	-808	-351	multi-exon	FALSE	canonical	3	236	junction_2	16.0277537068951	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTTCAAACTGAGTATC	NA	False	NA	75	True	AATAAA	-22	NA	74628054	74642725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74629324_74634582_74634696_74636196_74636276_74640563
WTC11_00013501	chr11	+	7857	6	FSM	ENSG00000166439.6	ENST00000299563.5	7842	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	14	junction_4	2.63818119165458	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTATAGTCAGAG	74747544	True	NA	18	True	AGTAAA	-20	NA	74748833	74842413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74749383_74789625_74789700_74810183_74810331_74817595_74817715_74834675_74834776_74835545
WTC11_00013508	chr11	+	5957	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	-28	0	-20	0	multi-exon	FALSE	canonical	3	24	junction_2	2	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	74987319	True	NA	18	True	AATAAA	-18	NA	74988904	75010907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74989155_74994508_74994721_75005412
WTC11_00013509	chr11	+	826	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	-39	-41	-20	41	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGCCTTTCATTTA	74987319	True	NA	NA	False	NA	NA	NA	74988904	74995084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74989155_74994508
WTC11_00013510	chr11	+	582	4	FSM	ENSG00000162139.10	ENST00000531619.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.1928941054479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCCTGTATGGGAGCA	74987357	True	NA	NA	False	NA	NA	NA	74988942	75005469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74989155_74994508_74994721_75004304_75004406_75005412
WTC11_00013513	chr11	+	752	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	-15	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	7902.9198047304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275781	True	NA	44	True	AATAAA	-20	NA	75399514	75405692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
WTC11_00013514	chr11	+	800	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	-4	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	7753.57908037027	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275781	True	NA	44	True	AATAAA	-20	NA	75399514	75405692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
WTC11_00013515	chr11	+	908	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	-5	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	8348.73916229271	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	75275781	True	NA	-90	True	NA	NA	NA	75399514	75405884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
WTC11_00013517	chr11	+	1322	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	-16	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	7818.27426965539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	75275781	True	NA	NA	False	NA	NA	NA	75399514	75422280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
WTC11_00013518	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	1326.1771525705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	75275809	True	NA	NA	False	AATAAA	-24	NA	75399542	75404994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
WTC11_00013522	chr11	+	531	5	FSM	ENSG00000149273.15	ENST00000530170.1	531	5	0	0	0	0	multi-exon	FALSE	canonical	2	597	junction_3	8871.69548338986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTGGAGTCTGGATG	75398769	True	NA	-20	True	NA	NA	NA	75400694	75405628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75400825_75401639_75401734_75402351_75402447_75404671_75404869_75405613
WTC11_00013529	chr11	+	4268	9	NNC	ENSG00000198382.9	novel	3152	9	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	30.1970093717904	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAGAGTTAAAAGTGTA	75979125	True	NA	3	True	AATAAA	-16	NA	75979650	76144232	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_75979699_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
WTC11_00013531	chr11	+	5427	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	13	4	11	-4	multi-exon	FALSE	canonical	3	10	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATGTGTTTTACTG	76380737	True	NA	NA	False	ATTAAA	-17	NA	76381335	76408128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76382294_76403659
WTC11_00013538	chr11	+	2645	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	-75	15	-75	-15	multi-exon	FALSE	canonical	3	213	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTATAAAAAGTTCTTTG	76780227	True	NA	13	True	NA	NA	NA	76783280	76798129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76783405_76795608
WTC11_00013540	chr11	+	4482	12	FSM	ENSG00000078124.13	ENST00000679866.1	4509	12	27	0	1	0	multi-exon	FALSE	canonical	1	2	junction_8	30.7270037642882	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	76859464	True	NA	NA	False	NA	NA	NA	76860896	77023879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77011329_77011376_77015015_77015118_77016674_77016780_77019730_77019777_77020273
WTC11_00013544	chr11	+	1218	12	NIC	ENSG00000078124.13	novel	3500	11	NA	NA	-2	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	38.6800822172159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATGCCTCAAAT	76859515	True	NA	8	True	TATAAA	-14	NA	76860947	77020573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_76861080_76926556_76926668_76959076_76959201_76976288_76976342_76985642_76985725_76990538_76990575_76997205_76997274_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
WTC11_00013565	chr11	+	578	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	-24	18	4	0	multi-exon	FALSE	canonical	3	30	junction_1	51	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	83069867	True	NA	1	True	NA	NA	NA	83072072	83073589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83072182_83072622_83072805_83073302
WTC11_00013566	chr11	+	1056	2	FSM	ENSG00000246067.9	ENST00000669459.2	1066	2	7	3	4	0	multi-exon	FALSE	canonical	3	112	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	83069867	True	NA	16	True	NA	NA	NA	83072072	83073604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83072147_83072622
WTC11_00013569	chr11	+	7476	16	FSM	ENSG00000165494.12	ENST00000298281.8	7677	16	149	52	6	-52	multi-exon	FALSE	canonical	3	52	junction_1	34.0446765295251	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTCAGAAATACTCTAA	83153915	True	NA	NA	False	AAGAAA	-7	NA	83157136	83187399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
WTC11_00013570	chr11	+	1743	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	-23	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	83153915	True	NA	12	True	AATAAA	-15	NA	83157136	83158879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83157100_83158900
WTC11_00013571	chr11	+	6233	16	FSM	ENSG00000165494.12	ENST00000690938.1	6270	16	37	0	8	0	multi-exon	FALSE	canonical	3	36	junction_7	38.1870251379823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGTACTTCTTTAT	83153946	True	NA	NA	False	AATAAA	-17	NA	83157167	83185794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167899_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
WTC11_00013579	chr11	+	1035	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	-20	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	149.935611180266	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623465	True	NA	46	True	AATAAA	-43	NA	85628572	85636536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
WTC11_00013581	chr11	+	1286	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	-39	26	-10	0	multi-exon	TRUE	canonical	3	316	junction_1	160.800773906374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	85623455	True	NA	20	True	AATAAA	-34	NA	85628562	85636510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
WTC11_00013588	chr11	+	2123	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	-533	106	-63	0	multi-exon	FALSE	canonical	3	15	junction_9	143.911696497849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	86244511	False	NA	-23	True	NA	NA	NA	86244689	86278707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
WTC11_00013589	chr11	+	1745	10	FSM	ENSG00000074266.22	ENST00000528180.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	128.211438021364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	86242221	True	NA	-23	True	NA	NA	NA	86244752	86278707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86276979_86277139_86277917_86277992_86278398
WTC11_00013595	chr11	+	737	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	-22	0	10	0	multi-exon	FALSE	canonical	3	78	junction_1	382.826621621619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	86293050	True	NA	NA	False	ATTAAA	-19	NA	86302220	86345791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
WTC11_00013596	chr11	+	1127	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	-19	0	10	0	multi-exon	FALSE	canonical	3	699	junction_4	133.507256357098	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	86293050	True	NA	29	True	AATAAA	-30	NA	86302220	86345943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
WTC11_00013597	chr11	+	1420	5	FSM	ENSG00000149196.17	ENST00000528004.5	1409	5	-11	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	505.559281884924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCAAATTTCTCTCA	86293069	True	NA	NA	False	NA	NA	NA	86302239	86345229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86302479_86306244_86306483_86326512_86326677_86337378_86337531_86344602
WTC11_00013599	chr11	+	1558	2	FSM	ENSG00000149196.17	ENST00000529405.1	1558	2	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTGCCAAGTACCAT	86343490	False	NA	13	True	AATAAA	-14	NA	86343507	86345927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86344722_86345583
WTC11_00013604	chr11	+	616	5	FSM	ENSG00000166575.17	ENST00000529023.5	1095	5	0	479	0	-2	multi-exon	FALSE	canonical	3	97	junction_4	13.1529464379659	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATGAGAATTTTGATA	87033875	True	NA	NA	False	AAGAAA	-8	NA	87037891	87157406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340
WTC11_00013613	chr11	+	2294	9	FSM	ENSG00000166004.15	ENST00000531404.1	2294	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	12.9903810567666	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAGAAAAAACAAAA	93722485	False	NA	NA	False	TATAAA	-43	NA	93722501	93730080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93723290_93724253_93724376_93725650_93725832_93726975_93727638_93728680_93728822_93729433_93729531_93729610_93729782_93729869_93729970_93730048
WTC11_00013614	chr11	+	2420	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	-3	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	62.6542178979848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739318	True	NA	24	True	AATAAA	-34	NA	93741590	93763102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
WTC11_00013615	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	69.2999985275495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739318	True	NA	NA	False	NA	NA	NA	93741590	93764749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
WTC11_00013618	chr11	+	4165	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	-2	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	23.2647802482637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739397	True	NA	NA	False	NA	NA	NA	93741669	93764749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
WTC11_00013621	chr11	+	2598	11	FSM	ENSG00000042429.12	ENST00000640804.1	2627	11	29	0	-7	0	multi-exon	FALSE	canonical	3	127	junction_4	16.3450298256075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGATGTTGACATCAA	93781812	True	NA	-37	True	TTTAAA	-45	NA	93784255	93812362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
WTC11_00013623	chr11	+	5025	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	62	0	-62	multi-exon	FALSE	canonical	3	127	junction_5	15.5881921830978	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCACCATGCCTGGC	93781838	True	NA	NA	False	NA	NA	NA	93784281	93814901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
WTC11_00013629	chr11	+	3026	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	-24	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	94492953	True	NA	8	True	AATAAA	-19	NA	94493983	94499577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_94494036_94496603
WTC11_00013643	chr11	+	4818	1	FSM	ENSG00000263465.5	ENST00000587424.3	4307	1	13	-524	13	524	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTTTTTTAATTC	95066129	True	NA	8	True	TATAAA	-16	NA	95066931	95071749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95066900_95071700
WTC11_00013650	chr11	+	3164	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	-23	0	14	0	multi-exon	FALSE	canonical	3	338	junction_7	49.0758596460622	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	95779946	True	NA	27	True	ATTAAA	-21	NA	95790474	95832693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
WTC11_00013651	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	40.773425441361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	95780130	False	NA	14	True	AGTAAA	-18	NA	95790658	95823215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
WTC11_00013653	chr11	+	5721	3	FSM	ENSG00000166037.11	ENST00000538158.1	2632	3	-1565	-1524	-1565	0	multi-exon	FALSE	canonical	3	388	junction_1	16.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	95824105	False	NA	25	True	ATTAAA	-19	NA	95824117	95832691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95828028_95829186_95829332_95831025
WTC11_00013663	chr11	+	5412	9	FSM	ENSG00000137693.14	ENST00000615667.4	5398	9	-14	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	42.3805306125348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102107945	True	NA	0	True	AATATA	-19	NA	102110446	102233423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102209516_102209565_102223621_102223753_102227468_102227582_102229701
WTC11_00013664	chr11	+	7813	9	FSM	ENSG00000260008.1_ENSG00000137693.14	ENST00000282441.10	5401	9	-2413	1	148	0	multi-exon	FALSE	canonical	3	50	junction_5	32.6257183828954	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	NA	False	NA	0	True	AATATA	-19	NA	102108033	102233423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206075_102209516_102209565_102223621_102223753_102227468_102227582_102229701
WTC11_00013666	chr11	+	5169	9	NNC	ENSG00000137693.14	novel	5401	9	NA	NA	-165	0	intron_retention	FALSE	canonical	3	28	junction_4	39.9951168894404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102110571	True	NA	0	True	AATATA	-19	NA	102110683	102233423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186138_102205892_102206075_102209516_102209565_102223621_102223753_102227468_102227582_102229701
WTC11_00013669	chr11	+	1426	6	NIC	ENSG00000137693.14	novel	5401	9	NA	NA	26	-16	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	42.5657139021537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCCATATAAATATATT	102162437	True	NA	-31	True	NA	NA	NA	102162481	102230563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_102162572_102205892_102206075_102209516_102209565_102223621_102223753_102227468_102227582_102229701
WTC11_00013673	chr11	+	2633	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	-22	6	1	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1617992842344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTGTGTTACCAGA	102344591	True	NA	18	True	AATAAA	-8	NA	102347224	102378663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
WTC11_00013675	chr11	+	432	4	FSM	ENSG00000187240.17	ENST00000533027.1	465	4	0	33	0	-33	multi-exon	FALSE	canonical	3	20	junction_1	3.77123616632825	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTTAGAGTGACCAC	103204899	False	NA	NA	False	NA	NA	NA	103204910	103215858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103204965_103209875_103209961_103211788_103211944_103215720
WTC11_00013676	chr11	+	473	4	FSM	ENSG00000187240.17	ENST00000525306.1	495	4	22	0	22	0	multi-exon	FALSE	canonical	3	32	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTGTTTTAGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	103282178	103287744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103282230_103283007_103283086_103286254_103286387_103287532
WTC11_00013677	chr11	+	767	6	FSM	ENSG00000187240.17	ENST00000533197.1	767	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.3784938665005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTTCAAAATATTAACATA	NA	False	NA	-98	True	TTTAAA	-33	NA	103358242	103479345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103358360_103435942_103436033_103455185_103455296_103456274_103456357_103468588_103468706_103479094
WTC11_00013678	chr11	+	652	4	FSM	ENSG00000187240.17	ENST00000530547.1	839	4	187	0	187	0	multi-exon	FALSE	canonical	3	50	junction_1	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAGTTATTGTTAAAA	NA	False	NA	-6	True	AATAAA	-2	NA	103455185	103479437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103455296_103456274_103456357_103468588_103468706_103479094
WTC11_00013679	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	19.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	105608937	False	NA	26	True	AATAAA	-35	NA	105610120	105614436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105610429_105610907_105611086_105612275
WTC11_00013680	chr11	+	674	3	FSM	ENSG00000152578.13	ENST00000531986.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	105608878	True	NA	NA	False	NA	NA	NA	105610061	105612434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105610429_105610937_105611086_105612275
WTC11_00013681	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	24.1513974750945	4518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610015	False	NA	8	True	AATAAA	-18	NA	105610028	105913110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
WTC11_00013682	chr11	+	998	4	FSM	ENSG00000152578.13	ENST00000525032.1	1439	4	0	441	0	-441	multi-exon	FALSE	canonical	3	55	junction_3	22.647050335284	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCCTAGATTTTATAT	105610540	False	NA	NA	False	AATAGA	-38	NA	105610671	105862208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023
WTC11_00013683	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	24.6506454476887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610665	False	NA	8	True	AATAAA	-18	NA	105610723	105913110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
WTC11_00013688	chr11	+	3520	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	7	-1642	7	1642	multi-exon	FALSE	canonical	3	40	junction_1	0	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGTCAGGAGAGACTA	107926037	True	NA	NA	False	CATAAA	-36	NA	107928454	107965124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_107928796_107961945
WTC11_00013689	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	14.0352290441228	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	108006634	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
WTC11_00013690	chr11	+	3596	20	FSM	ENSG00000166266.14	ENST00000531427.5	3596	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	26.0078828876779	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTTTTAAAAATTAGT	108006996	False	NA	NA	False	AAGAAA	-34	NA	108009259	108106852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189_108104903_108106206
WTC11_00013697	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	108220816	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
WTC11_00013706	chr11	+	6435	17	FSM	ENSG00000178105.12	ENST00000526794.1	6707	17	0	272	0	-272	multi-exon	FALSE	canonical	3	196	junction_10	21.9569892061731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCACGCCTGTAA	108661781	True	NA	NA	False	NA	NA	NA	108665121	108921971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872
WTC11_00013707	chr11	+	2348	2	FSM	ENSG00000185742.7	ENST00000327419.7	5867	2	-21	3540	-21	-3540	multi-exon	FALSE	canonical	3	9	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACAACCACAGAAAC	109422105	True	NA	NA	False	TATAAA	-44	NA	109422168	109425627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_109422264_109423374
WTC11_00013710	chr11	+	2564	7	FSM	ENSG00000204381.12	ENST00000375614.7	2536	7	2	-30	2	30	multi-exon	FALSE	canonical	3	18	junction_5	4.17997873466148	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGGATTGGAATCCCTG	111540332	True	NA	NA	False	NA	NA	NA	111540721	111561775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111540929_111543922_111544221_111549617_111549776_111554560_111554594_111555206_111555291_111557540_111557644_111560094
WTC11_00013720	chr11	+	4945	13	FSM	ENSG00000150768.17	ENST00000527231.2	4927	13	-18	0	0	0	multi-exon	FALSE	canonical	3	579	junction_10	46.9269526912721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCCTTCTAATAAACAT	112016233	True	NA	-9	True	AATAAA	-4	NA	112025407	112064240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037
WTC11_00013722	chr11	+	3960	14	FSM	ENSG00000150768.17	ENST00000679815.1	3960	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	247.12620449225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016233	True	NA	-11	True	AAAAAG	-44	NA	112025407	112064375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028977_112033403_112033611_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
WTC11_00013724	chr11	+	3894	14	FSM	ENSG00000150768.17	ENST00000681638.1	3871	14	-23	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	184.320983211546	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	112016233	True	NA	3	True	ATTAAA	-14	NA	112025407	112064389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028977_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
WTC11_00013728	chr11	+	347	5	FSM	ENSG00000150776.18	ENST00000526879.5	355	5	8	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_1	29.8705540624877	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAATAAAAAGTTCTAT	112072996	True	NA	-23	True	AATGAA	-41	NA	112074323	112080512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112074359_112074886_112074917_112075566_112075644_112078214_112078316_112080408
WTC11_00013730	chr11	+	4012	6	FSM	ENSG00000150776.18	ENST00000280352.13	3693	6	-7	-312	-5	312	multi-exon	FALSE	canonical	3	13	junction_5	24.2701462706758	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAGGAAAGAAAAATAG	112072954	True	NA	NA	False	NA	NA	NA	112074281	112085462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
WTC11_00013738	chr11	+	367	3	FSM	ENSG00000149294.17	ENST00000534046.2	632	3	265	0	265	0	multi-exon	FALSE	canonical	3	13	junction_1	1	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAACTGTACTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	113231644	113232748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113231796_113232169_113232355_113232717
WTC11_00013740	chr11	+	566	8	FSM	ENSG00000149292.17	ENST00000531164.5	566	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8.49969987465344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAAGATCTTAGAAAT	113314248	True	NA	NA	False	NA	NA	NA	113314582	113338785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113314619_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773
WTC11_00013741	chr11	+	599	8	FSM	ENSG00000149292.17	ENST00000529850.5	594	8	-5	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_6	9.84782167977948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAACCCCAAGCTGCA	113314243	True	NA	NA	False	NA	NA	NA	113314577	113338800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113334965_113335038_113338773
WTC11_00013742	chr11	+	2261	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	-5	0	-1	0	multi-exon	FALSE	canonical	3	9	junction_1	5.01562185427032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	113314243	True	NA	7	True	AATAAA	-18	NA	113314577	113366387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
WTC11_00013747	chr11	+	1567	4	FSM	ENSG00000076053.12	ENST00000541475.5	6725	4	0	5158	0	-959	multi-exon	FALSE	canonical	3	387	junction_3	100.943328435095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	114394742	True	NA	NA	False	NA	NA	NA	114400606	114406860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405705
WTC11_00013749	chr11	+	3610	5	FSM	ENSG00000076053.12	ENST00000375490.10	3610	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	102.743612940173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	114394801	True	NA	NA	False	AATAAA	-18	NA	114400665	114410607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405705_114405800_114407444
WTC11_00013751	chr11	+	1081	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	-1	0	0	0	multi-exon	TRUE	canonical	3	756	junction_4	81.5381642068438	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426081	True	NA	32	True	AATAAA	-39	NA	114439465	114450279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
WTC11_00013755	chr11	+	1081	4	FSM	ENSG00000076043.11	ENST00000538791.3	1081	4	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	98.1121806912883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAATGCAAACCTTTT	114444135	False	NA	18	True	AATAAA	-25	NA	114444154	114450265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114444653_114445978_114446088_114447825_114447880_114449845
WTC11_00013763	chr11	+	833	7	FSM	ENSG00000149577.16	ENST00000529484.5	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	2.3629078131263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAAATTAGCC	NA	False	NA	NA	False	AATAAA	-5	NA	117190682	117194151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852
WTC11_00013767	chr11	+	16119	4	FSM	ENSG00000149591.17_ENSG00000280143.1	ENST00000532870.5	2166	4	-694	-13259	13	7745	multi-exon	FALSE	canonical	3	438	junction_3	14.0079342596338	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGCCAGAGAATCAAAG	117193779	False	NA	NA	False	NA	NA	NA	117201178	117218037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117203194_117203306_117203485_117203781_117203885_117204214
WTC11_00013772	chr11	+	2842	13	FSM	ENSG00000167257.11	ENST00000530849.1	2846	13	4	0	4	0	multi-exon	FALSE	canonical	3	8	junction_11	30.618168172218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAGAGTTAACTTT	117234243	True	NA	NA	False	ATTAAA	-6	NA	117234266	117286445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117234380_117238600_117238647_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117283114_117283211_117285085
WTC11_00013783	chr11	+	588	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	-13	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3261.66790154976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354371	True	NA	16	True	AATAAA	-17	NA	118401605	118409199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
WTC11_00013784	chr11	+	1121	3	FSM	ENSG00000167283.9	ENST00000300688.8	1121	3	0	0	0	0	multi-exon	FALSE	canonical	3	7155	junction_1	213	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTCTGGAGCGATT	118354371	True	NA	5	True	AATAAA	-17	NA	118401605	118409847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118401718_118406936_118407098_118408999
WTC11_00013785	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354398	True	NA	16	True	AATAAA	-17	NA	118401632	118409199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118401729_118406936_118407098_118408999
WTC11_00013786	chr11	+	1557	2	FSM	ENSG00000167283.9	ENST00000527186.1	1582	2	25	0	25	0	multi-exon	FALSE	canonical	3	7581	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCCCCAAGAGAGAACAG	118406125	False	NA	NA	False	AATATA	-1	NA	118406151	118409610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118407098_118408999
WTC11_00013791	chr11	+	2442	8	FSM	ENSG00000149582.16	ENST00000411589.6	2442	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	17.6056577177187	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCTTCATTTCTTC	118530997	False	NA	21	True	AATAAA	-21	NA	118531040	118535835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531777_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
WTC11_00013792	chr11	+	2437	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	-17	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.2619823677497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	118530407	True	NA	15	True	AATAAA	-15	NA	118531174	118535829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
WTC11_00013799	chr11	+	2921	13	FSM	ENSG00000019144.20	ENST00000527898.5	2921	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	57.0041421496914	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118631894	False	NA	15	True	AATAAA	-15	NA	118631915	118658025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118632054_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
WTC11_00013800	chr11	+	3128	15	FSM	ENSG00000019144.20	ENST00000534140.2	3128	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	65.5359381078311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118631954	False	NA	15	True	AATAAA	-15	NA	118631975	118658025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
WTC11_00013805	chr11	+	892	6	FSM	ENSG00000186166.9	ENST00000524670.5	885	6	-7	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	52.0207650847236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGCAAGCCAGAAGAGG	118994484	True	NA	NA	False	NA	NA	NA	118998137	119012262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118998594_118999010_118999110_119010763_119010831_119011220_119011312_119011938_119012004_119012148
WTC11_00013810	chr11	+	1192	8	ISM	ENSG00000186166.9	ENST00000334418.6	1254	11	12036	209	640	-57	3prime_fragment	FALSE	canonical	3	107	junction_2	44.2460652003575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAAAGCTAATCATGC	NA	False	NA	NA	False	AATGAA	-15	NA	119010173	119015584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
WTC11_00013822	chr11	+	1576	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	-17	0	2	0	multi-exon	FALSE	canonical	2	5	junction_1	175.09665969597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	119081903	True	NA	-12	True	GGGGCT	-43	NA	119084867	119093516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
WTC11_00013827	chr11	+	1796	12	FSM	ENSG00000256269.11	ENST00000543543.5	1796	12	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_8	57.8673318822767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTACTAATAAACCAGT	119087959	False	NA	-10	True	GGGGCT	-45	NA	119087986	119093518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092524_119092757_119092812_119092934_119093022_119093109
WTC11_00013842	chr11	+	3760	10	FSM	ENSG00000160703.16	ENST00000292199.6	3744	10	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.8746727726266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGCCTCTTCTTTAC	119167497	True	NA	18	True	ATTAAA	-20	NA	119168712	119184014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119168922_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
WTC11_00013843	chr11	+	4143	10	FSM	ENSG00000160703.16	ENST00000409109.6	4131	10	-12	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	20.8439232344218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167497	True	NA	20	True	ATTAAA	-22	NA	119168712	119184016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
WTC11_00013844	chr11	+	4418	9	ISM	ENSG00000160703.16	ENST00000409991.5	3716	10	67	3	53	-3	intron_retention	FALSE	canonical	3	30	junction_1	22.6812146941031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAATTGTGGCCTCTTC	119167579	True	NA	13	True	ATTAAA	-15	NA	119168794	119184009	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093
WTC11_00013847	chr11	+	2794	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	119324394	True	NA	14	True	AATAAA	-17	NA	119334515	119337309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119334500_119337300
WTC11_00013853	chr11	+	4404	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	-109	-2861	-109	0	multi-exon	FALSE	canonical	3	12	junction_1	16	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	120325166	False	NA	NA	False	AGTAAA	-13	NA	120325186	120333679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120325369_120327121_120327641_120329976
WTC11_00013855	chr11	+	9454	40	FSM	ENSG00000196914.9	ENST00000356641.7	6891	40	-501	-2062	0	88	multi-exon	FALSE	canonical	1	5	junction_37	13.8340878100376	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCAGTGACTGTCA	120334705	True	NA	110	True	NA	NA	NA	120336412	120489122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120337276_120406117_120406142_120407737_120407824_120420752_120420852_120421802_120421853_120424357_120424416_120428068_120428248_120429439_120429518_120429711_120429832_120431770_120431912_120437307_120437383_120440128_120440222_120441706_120441818_120442103_120442203_120445421_120445465_120446402_120446509_120446947_120447086_120447873_120447907_120448233_120448349_120449108_120449215_120451511_120451725_120457117_120457251_120457720_120457757_120458079_120458235_120459173_120459321_120460671_120460758_120465236_120465363_120467193_120467309_120469287_120469389_120473049_120473128_120474559_120474636_120475339_120475508_120476660_120476749_120477218_120477306_120477446_120477527_120478155_120478390_120479959_120480431_120481259_120481577_120484437_120484508_120485066
WTC11_00013856	chr11	+	10326	41	FSM	ENSG00000196914.9	ENST00000397843.7	10326	41	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_38	14.2337626789265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTACTTCTATTTTTTA	120334705	True	NA	19	True	AATAAA	-20	NA	120336412	120489937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120337276_120406117_120406142_120407737_120407824_120409393_120409451_120420752_120420852_120421802_120421853_120424357_120424416_120428068_120428248_120429439_120429518_120429711_120429832_120431770_120431912_120437307_120437383_120440128_120440222_120441706_120441818_120442103_120442203_120445421_120445465_120446402_120446509_120446947_120447086_120447873_120447907_120448233_120448349_120449108_120449215_120451511_120451725_120457117_120457251_120457720_120457757_120458079_120458235_120459173_120459321_120460671_120460758_120465236_120465363_120467193_120467309_120469287_120469389_120473049_120473128_120474559_120474636_120475339_120475508_120476660_120476749_120477218_120477306_120477446_120477527_120478155_120478390_120479959_120480431_120481259_120481577_120484437_120484508_120485066
WTC11_00013858	chr11	+	5284	9	FSM	ENSG00000154114.13	ENST00000683345.1	5270	9	-14	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	20.6998641299889	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTCTGATTTTTT	121023248	True	NA	NA	False	ATTAAA	-17	NA	121024087	121090776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121024292_121036504_121036613_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
WTC11_00013873	chr11	+	1977	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	1	0	1	0	multi-exon	FALSE	canonical	3	33	junction_1	58.1498925192472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113103	True	NA	18	True	AATAAA	-20	NA	124115404	124124841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
WTC11_00013875	chr11	+	3416	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	3	0	3	0	multi-exon	FALSE	canonical	3	82	junction_12	44.2911880915443	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	124113105	True	NA	NA	False	ATTAAA	-27	NA	124115406	124146909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
WTC11_00013876	chr11	+	2707	10	FSM	ENSG00000110002.16	ENST00000392744.4	2691	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	4	junction_1	58.3459245670188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGTTGACCTTCCTTCA	124113132	True	NA	NA	False	NA	NA	NA	124115433	124124387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124116681_124117366_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
WTC11_00013877	chr11	+	3504	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	-16	812	-16	0	multi-exon	FALSE	canonical	3	33	junction_1	52.4836541279024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	124113132	True	NA	NA	False	ATTAAA	-27	NA	124115433	124146909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
WTC11_00013879	chr11	+	4485	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	-17	0	-3	0	multi-exon	FALSE	canonical	3	65	junction_3	41.6065144035922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	124620254	True	NA	21	True	AATAAA	-22	NA	124622857	124635398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
WTC11_00013888	chr11	+	3255	7	FSM	ENSG00000154134.15	ENST00000527245.5	3255	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	32.4178448800451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876435	False	NA	14	True	AATAAA	-16	NA	124876465	124881466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124878132_124878297_124878437_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00013904	chr11	+	2210	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	-19	0	0	0	multi-exon	TRUE	canonical	3	1197	junction_9	95.5403579645796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554699	True	NA	17	True	ATTAAA	-22	NA	125569457	125584684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
WTC11_00013906	chr11	+	2264	12	NIC	ENSG00000149547.15	novel	2191	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	500.771058361565	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554732	True	NA	17	True	ATTAAA	-22	NA	125569490	125584684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125569574_125570103_125570191_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
WTC11_00013907	chr11	+	1561	10	FSM	ENSG00000134910.14	ENST00000534472.5	1561	10	-3	3	-3	-3	multi-exon	FALSE	canonical	3	967	junction_9	97.8923571084429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTTTACCCTTGTTT	125592804	False	NA	NA	False	NA	NA	NA	125592815	125609895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433
WTC11_00013909	chr11	+	4440	18	FSM	ENSG00000134910.14	ENST00000392708.9	4501	18	0	61	0	-61	multi-exon	FALSE	canonical	3	967	junction_9	104.121269461745	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACTCCAACCTGGGAG	125564631	True	NA	NA	False	NA	NA	NA	125592851	125623030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
WTC11_00013911	chr11	+	4179	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	-6	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	371.674887801452	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	125564631	True	NA	-32	True	AATGAA	-11	NA	125592851	125622721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
WTC11_00013920	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	82.1032687873152	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	125620755	True	NA	21	True	AATAAA	-16	NA	125625973	125676255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
WTC11_00013927	chr11	+	1970	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	5454	0	126	multi-exon	TRUE	canonical	3	87	junction_9	9.23521825396385	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGAAACCATT	125903423	True	NA	-10	True	ATTAAA	-3	NA	125904507	125923389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
WTC11_00013930	chr11	+	1692	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	92.5053207929144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208686	True	NA	-11	True	NA	NA	NA	126211765	126262631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
WTC11_00013931	chr11	+	2091	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	-122	47	-64	0	multi-exon	TRUE	canonical	3	288	junction_7	58.7663541067506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	126211647	False	NA	-2	True	TATAAA	-9	NA	126211659	126262921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
WTC11_00013932	chr11	+	1828	8	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	28	-44	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	139.143150483704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGAATTTTAGTT	126208730	True	NA	-46	True	NA	NA	NA	126211809	126262877	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
WTC11_00013934	chr11	+	3514	2	FSM	ENSG00000197798.9	ENST00000531935.1	1888	2	-568	-1058	-568	995	multi-exon	FALSE	canonical	3	470	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGGTGCCCACAAAGAC	126259819	False	NA	NA	False	NA	NA	NA	126259830	126263979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126261485_126262119
WTC11_00013939	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.871449156017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126266131	True	NA	10	True	AATACA	-17	NA	126269153	126278126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
WTC11_00013941	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	129.599382714579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	126266167	True	NA	-47	True	NA	NA	NA	126269189	126278069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
WTC11_00013942	chr11	+	2210	9	FSM	ENSG00000110074.12	ENST00000534315.5	2210	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	99.7142793184607	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126267922	False	NA	10	True	AATACA	-17	NA	126270944	126278126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126271658_126272968_126273080_126273335_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
WTC11_00013947	chr11	+	1788	11	FSM	ENSG00000110080.20	ENST00000227495.10	1790	11	2	0	2	0	multi-exon	FALSE	canonical	3	9	junction_3	18.3292116578973	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTACCATTAAACTATTT	126354277	True	NA	-21	True	NA	NA	NA	126355661	126414604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126355843_126406095_126406172_126406472_126406546_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
WTC11_00013950	chr11	+	2053	15	FSM	ENSG00000084234.18	ENST00000533616.5	2041	15	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	796.494029981342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCAGCCGCTGCCAGG	130029660	True	NA	NA	False	NA	NA	NA	130069824	130143522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
WTC11_00013952	chr11	+	579	4	FSM	ENSG00000084234.18	ENST00000527702.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	891.286087005115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAGATGAAGA	130029729	True	NA	NA	False	NA	NA	NA	130069893	130121766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130110537_130110662_130120705_130120819_130121613
WTC11_00013954	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_6	257.563368686017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130029729	True	NA	17	True	AATAAA	-28	NA	130069893	130143806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
WTC11_00013955	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	497.655880101903	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029729	True	NA	26	True	AATAAA	-15	NA	130069893	130144805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
WTC11_00013956	chr11	+	3607	3	FSM	ENSG00000084234.18	ENST00000530493.1	1322	3	-1913	-372	-196	0	multi-exon	FALSE	canonical	3	2143	junction_1	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130138460	False	NA	17	True	AATAAA	-28	NA	130138581	130143806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130141573_130141918_130142075_130143346
WTC11_00013962	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	135	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	131250228	True	NA	10	True	NA	NA	NA	131253421	131300771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_131253592_131300357
WTC11_00013967	chr11	+	2576	7	FSM	ENSG00000182667.15	ENST00000427481.6	2583	7	7	0	7	0	multi-exon	FALSE	canonical	2	6	junction_5	6.12825877028341	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146281	132336821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132330152_132330186_132335045
WTC11_00013974	chr11	+	3661	6	FSM	ENSG00000151502.11	ENST00000281187.10	3661	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	14.6642422238587	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCTGTGGTCTCTTC	134222710	True	NA	45	True	ATTAAA	-42	NA	134224670	134247788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
WTC11_00013975	chr11	+	488	2	FSM	ENSG00000151498.12	ENST00000525961.1	509	2	-6	27	0	-27	multi-exon	FALSE	canonical	3	428	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAAAAAGAAACTTCTT	134250039	True	NA	NA	False	AATAAA	-33	NA	134253557	134256883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134253710_134256547
WTC11_00013979	chr11	+	1810	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	-13	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	160.313086534711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134250029	True	NA	34	True	AATAAA	-23	NA	134253547	134265850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
WTC11_00013980	chr11	+	3208	8	FSM	ENSG00000151498.12	ENST00000533387.5	3197	8	-11	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	165.903340434564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134250039	True	NA	34	True	AATAAA	-23	NA	134253557	134265850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134253710_134258514_134258625_134259007_134259085_134259607_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
WTC11_00013992	chr11	-	343	2	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	58	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATGTGGGTCTGAAGAG	-128897	False	NA	NA	False	NA	NA	NA	128917	128233	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_128436_128776
WTC11_00013993	chr11	-	683	5	FSM	ENSG00000230724.9	ENST00000527683.1	683	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	13.2169398878863	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCCAGAGGGGTGACAG	NA	False	NA	NA	False	NA	NA	NA	139117	133613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_133779_134563_134797_134889_134948_138046_138112_138955
WTC11_00013994	chr11	-	1105	8	NNC	ENSG00000230724.9	novel	1569	7	NA	NA	-24709	-1244	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	64.752275194445	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTGTAATAATGGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	164321	134857	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_134948_138046_138112_150835_150901_153732_153890_159454_159981_161079_161139_163295_163362_164244
WTC11_00013995	chr11	-	3429	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	-79	-434	-62	434	multi-exon	FALSE	canonical	3	193	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAACAGGGAGAACGGT	-207349	False	NA	NA	False	NA	NA	NA	207461	202489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_205668_205951_206044_207302
WTC11_00013996	chr11	-	2821	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	0	-29	0	multi-exon	FALSE	canonical	3	180	junction_1	6.64997911442	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-207316	False	NA	-2	True	AATAAA	-35	NA	207428	202923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_205470_205610_205668_205951_206044_207302
WTC11_00013999	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	32.0767309223784	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	-234797	True	NA	NA	False	TATAAA	-17	NA	236342	215029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
WTC11_00014000	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	68.8565336204359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234798	True	NA	-42	True	GGGGCT	-22	NA	236343	216178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
WTC11_00014003	chr11	-	365	2	FSM	ENSG00000142082.15	ENST00000525776.1	365	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTCCAGCAGTACGATC	-233594	False	NA	NA	False	NA	NA	NA	233683	233191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_233216_233342
WTC11_00014004	chr11	-	621	3	NNC	ENSG00000142089.17	novel	725	3	NA	NA	0	79576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4073	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCATTTATCATTTTC	-272974	True	NA	NA	False	AAAAAG	-2	NA	320841	240099	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_240130_319676_319991_320564
WTC11_00014005	chr11	-	385	1	FSM	ENSG00000277290.1	ENST00000620253.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATCCGGGCGCAGTGG	NA	False	NA	NA	False	AGTAAA	-21	NA	243483	243098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_243100_243500
WTC11_00014006	chr11	-	1046	2	FSM	ENSG00000142089.17	ENST00000680932.1	1044	2	0	-2	0	2	multi-exon	FALSE	canonical	3	470	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGACTTCACCTGGGG	-272974	True	NA	-19	True	AATAAA	-20	NA	320841	319673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319991_320112
WTC11_00014007	chr11	-	589	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	-2	0	2	multi-exon	FALSE	canonical	3	249	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGACTTCACCTGGGG	-272974	True	NA	-19	True	AATAAA	-20	NA	320841	319673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319986_320564
WTC11_00014008	chr11	-	613	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	-2	0	2	multi-exon	FALSE	canonical	3	8146	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGACTTCACCTGGGG	-272993	True	NA	-19	True	AATAAA	-20	NA	320860	319673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319991_320564
WTC11_00014009	chr11	-	726	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_2	227.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGCGACTTCACCT	-272974	True	NA	-23	True	AATAAA	-16	NA	320841	319677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319991_320112_320249_320564
WTC11_00014011	chr11	-	614	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	-6	0	6	multi-exon	FALSE	canonical	3	24	junction_2	94.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-406213	True	NA	0	True	AATAAA	-23	NA	407135	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_407061
WTC11_00014013	chr11	-	1676	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	-72	-6	0	6	multi-exon	FALSE	canonical	3	31	junction_9	69.8889772124508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-413840	True	NA	0	True	AATAAA	-23	NA	417397	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
WTC11_00014015	chr11	-	1859	7	FSM	ENSG00000185187.13	ENST00000527295.5	1867	7	7	1	7	-1	multi-exon	FALSE	canonical	3	14	junction_3	95.248213748197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCTCGGTCTCCTC	-413891	True	NA	-7	True	AATAAA	-16	NA	417448	405716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_407165_407424_407535_407816_407958_408072_408207_409867_410028_417293
WTC11_00014016	chr11	-	1286	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	70.8044158659787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-413840	True	NA	0	True	AATAAA	-23	NA	417397	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
WTC11_00014017	chr11	-	821	4	FSM	ENSG00000185187.13	ENST00000527987.1	803	4	0	-18	0	6	multi-exon	FALSE	canonical	3	197	junction_3	23.0988215187606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-407168	False	NA	0	True	AATAAA	-23	NA	407191	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_406842_406994_407061
WTC11_00014018	chr11	-	1390	8	NIC	ENSG00000185187.13	novel	1743	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	71.5150904583453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATTCTGCTGGGGCC	-406457	False	NA	-18	True	AATAAA	-5	NA	410014	405727	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867
WTC11_00014019	chr11	-	1756	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	73.5100970955691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATTCTGCTGGGGCC	-413891	True	NA	-18	True	AATAAA	-5	NA	417448	405727	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
WTC11_00014020	chr11	-	1649	8	FSM	ENSG00000185187.13	ENST00000531205.5	1649	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	56.1728382325661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGACAGCGGGGGCCAGG	-406420	False	NA	NA	False	NA	NA	NA	409977	405871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867
WTC11_00014032	chr11	-	2800	11	FSM	ENSG00000185101.13	ENST00000526142.5	2868	11	68	0	68	0	multi-exon	FALSE	canonical	3	12	junction_2	7.16937933157397	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTGGCCTCGCTGG	-429664	False	NA	-12	True	AGTAAA	-18	NA	429690	417932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418990_419581_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569
WTC11_00014033	chr11	-	671	3	FSM	ENSG00000185101.13	ENST00000524802.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCAGTCGGTGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	419415	418540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418814_418887
WTC11_00014035	chr11	-	466	2	FSM	ENSG00000185101.13	ENST00000525857.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGACCCGAGCAGGGGCT	-430087	False	NA	NA	False	NA	NA	NA	430113	429542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_429653_429757
WTC11_00014036	chr11	-	2975	9	FSM	ENSG00000023191.17	ENST00000534797.5	2973	9	0	-2	0	2	multi-exon	FALSE	canonical	3	366	junction_6	42.0081837265074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTGTCCTTCCTGGGG	-501389	False	NA	1	True	ATTAAA	-20	NA	503570	494509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061
WTC11_00014037	chr11	-	3288	9	FSM	ENSG00000023191.17	ENST00000525522.5	3281	9	0	-7	0	3	multi-exon	FALSE	canonical	3	125	junction_8	112.208998636473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTCCTGGGGT	-503700	False	NA	2	True	ATTAAA	-21	NA	505881	494508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_500000_500483_500655_502061_502182_504823
WTC11_00014038	chr11	-	2020	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	-6	0	3	multi-exon	FALSE	canonical	3	77	junction_9	142.986852542463	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTCCTGGGGT	-504619	False	NA	2	True	ATTAAA	-21	NA	506800	494508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
WTC11_00014039	chr11	-	1867	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	-3	0	2	multi-exon	FALSE	canonical	3	24	junction_9	136.678861244565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTGTCCTTCCTGGGG	-504640	False	NA	1	True	ATTAAA	-20	NA	506821	494509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
WTC11_00014040	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	17	-17	17	0	multi-exon	FALSE	canonical	3	102	junction_9	113.440145745087	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATCATTAAAGCACT	NA	False	NA	-33	True	NA	NA	NA	507283	494543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
WTC11_00014042	chr11	-	1957	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	-5	0	2	multi-exon	FALSE	canonical	3	58	junction_10	153.820057209715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTGTCCTTCCTGGGG	-505061	True	NA	1	True	ATTAAA	-20	NA	507242	494509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
WTC11_00014044	chr11	-	1967	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	115	junction_10	133.515392371067	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTCCTGGGGT	-504634	False	NA	2	True	ATTAAA	-21	NA	506815	494508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
WTC11_00014045	chr11	-	1729	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	-4	0	0	multi-exon	FALSE	canonical	3	49	junction_9	129.179270591753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATCATTAAAGCACT	-504604	False	NA	-33	True	NA	NA	NA	506785	494543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
WTC11_00014053	chr11	-	1152	5	FSM	ENSG00000174775.18	ENST00000451590.5	1151	5	0	-1	0	0	multi-exon	FALSE	canonical	3	181	junction_1	40.5732362524855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-534643	True	NA	-5	True	AGTAAA	-18	NA	535550	532241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532756_533452_533613_533765_533945_534211_534376_535415
WTC11_00014054	chr11	-	1071	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	-1	0	1	multi-exon	FALSE	canonical	3	181	junction_2	39.700881602302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTCGGCTGAGGGT	NA	False	NA	-4	True	AGTAAA	-19	NA	535576	532240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
WTC11_00014055	chr11	-	1265	6	FSM	ENSG00000174775.18	ENST00000417302.6	1244	6	0	-21	0	1	multi-exon	FALSE	canonical	3	40	junction_1	103.035139636922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTCGGCTGAGGGT	NA	False	NA	-4	True	AGTAAA	-19	NA	535580	532240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
WTC11_00014056	chr11	-	1234	4	FSM	ENSG00000185522.9	ENST00000469990.1	1232	4	0	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_2	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCTGGAAATGTTGGT	-556343	False	NA	-4	True	AGTAAA	-18	NA	556420	554852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_555112_555304_555931_555995_556116_556191
WTC11_00014057	chr11	-	1030	9	FSM	ENSG00000185522.9	ENST00000441853.5	1051	9	21	0	21	0	multi-exon	FALSE	canonical	2	6	junction_5	3.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGGTGATAGGGCACCC	-560110	False	599	NA	False	NA	NA	NA	560709	556925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_559346_559499_560682
WTC11_00014058	chr11	-	2043	13	NNC	ENSG00000177030.19	novel	2331	13	NA	NA	-8	59503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	235.684272680399	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCCTGGAGAAATAAAAAG	-691693	True	NA	NA	False	NA	NA	NA	695049	584729	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_584755_644231_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
WTC11_00014059	chr11	-	1925	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	-2	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.5262707351287	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-615107	True	NA	-1	True	AATAAA	-18	NA	615950	612552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
WTC11_00014060	chr11	-	1936	11	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	19.9509398274868	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTACTGGCATCTTGGCTG	-615124	True	NA	-4	True	AATAAA	-15	NA	615967	612555	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614532_614796_615008_615096_615260_615344_615648_615912
WTC11_00014062	chr11	-	1781	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	-155	-30	-39	0	multi-exon	TRUE	canonical	3	14	junction_5	21.2599241532043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-614924	False	NA	-1	True	AATAAA	-18	NA	615767	612552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
WTC11_00014063	chr11	-	617	2	FSM	ENSG00000185507.21	ENST00000527160.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGGCAGTAGAGACGAC	-614044	False	NA	NA	False	NA	NA	NA	614887	614008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_614535_614796
WTC11_00014064	chr11	-	609	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	-83	0	-83	0	multi-exon	TRUE	canonical	3	12	junction_1	1.88561808316413	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	NA	False	NA	0	True	AATAAA	-19	NA	627264	626308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_626531_626696_626790_626887_626990_627072
WTC11_00014066	chr11	-	1623	10	FSM	ENSG00000177030.19	ENST00000527170.5	1623	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	254.157042926486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-687894	False	NA	-15	True	AATAAA	-15	NA	687936	644232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_644655_651161_651408_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910
WTC11_00014067	chr11	-	1901	12	FSM	ENSG00000177030.19	ENST00000528864.6	1890	12	0	-11	0	0	multi-exon	FALSE	canonical	2	17	junction_11	180.037599378804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-693621	False	NA	-15	True	AATAAA	-15	NA	693663	644232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_693488
WTC11_00014068	chr11	-	2190	12	FSM	ENSG00000177030.19	ENST00000382409.4	2190	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.747180387569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-694982	True	NA	-15	True	AATAAA	-15	NA	695222	644232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
WTC11_00014072	chr11	-	1662	3	NNC	ENSG00000184524.6	novel	1605	2	NA	NA	-9	43849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATCGTGGCAT	-786191	False	3931	NA	False	NA	NA	NA	790122	743265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_743295_787118_788659_790029
WTC11_00014075	chr11	-	4699	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	3	-339	0	337	multi-exon	FALSE	canonical	3	20	junction_1	10.1900311429297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGGGACACACCCCCGT	-774603	True	NA	NA	False	NA	NA	NA	777484	766882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
WTC11_00014078	chr11	-	740	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	14.243907079481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTCCTGGTGTTCGC	NA	False	NA	-25	True	AATAAA	-19	NA	777508	767223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
WTC11_00014082	chr11	-	1601	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	4	0	-4	multi-exon	FALSE	canonical	2	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCTGCTCTTGCATCC	-786159	False	3931	-28	True	AATAAA	-11	NA	790090	787118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_788659_790029
WTC11_00014083	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	99.3031273984415	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794668	False	NA	-3	True	AATAAA	-18	NA	796263	790474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
WTC11_00014084	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	32.3377240241444	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794350	True	NA	-3	True	AATAAA	-18	NA	798281	790474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
WTC11_00014085	chr11	-	950	7	FSM	ENSG00000177542.11	ENST00000627843.2	1021	7	71	0	-22	0	multi-exon	FALSE	canonical	3	310	junction_3	19.8074060223274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGTGCATGGGATGGCG	-793620	False	NA	NA	False	NA	NA	NA	795215	792304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986
WTC11_00014086	chr11	-	552	4	FSM	ENSG00000177542.11	ENST00000630809.2	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	18.5532267334343	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGCCGGCTGTGTGGC	-789758	False	NA	NA	False	NA	NA	NA	793689	792361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792459_792552_792728_792869_792989_793528
WTC11_00014087	chr11	-	641	7	FSM	ENSG00000177542.11	ENST00000531514.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	123.027661749525	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGATCCTGGCTGCCC	-794339	True	NA	NA	False	NA	NA	NA	798270	792720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792728_792869_792989_793528_793620_794452_794514_794775_794902_794986_795170_798216
WTC11_00014089	chr11	-	560	5	FSM	ENSG00000177542.11	ENST00000524891.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	44.1757852222233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTCCACCCTGCCAGC	-794338	True	NA	NA	False	GATAAA	-2	NA	798269	793477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_793620_794457_794514_794775_794902_794986_795170_798216
WTC11_00014090	chr11	-	608	5	FSM	ENSG00000177542.11	ENST00000625316.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	169.998529405404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGCAGCCAACGACT	-794642	False	209	NA	False	NA	NA	NA	796237	793576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_793620_794452_794514_794775_794902_794986_795170_796042
WTC11_00014096	chr11	-	3917	14	FSM	ENSG00000177595.19	ENST00000524486.5	3917	14	0	0	0	0	multi-exon	TRUE	canonical	2	45	junction_13	34.9252794967913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGATTTATTTGTTG	-805062	False	NA	-2	True	NA	NA	NA	805103	799179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_803648_804093
WTC11_00014097	chr11	-	2958	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	53	junction_3	38.3643352897222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	-803661	True	NA	-6	True	NA	NA	NA	805256	799183	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
WTC11_00014100	chr11	-	3999	12	FSM	ENSG00000177595.19	ENST00000534525.5	3994	12	0	-5	0	0	multi-exon	FALSE	canonical	2	20	junction_11	41.5920764863487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGATTTATTTGTTG	-808737	True	NA	-2	True	NA	NA	NA	809499	799179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800245_800332_800452_800542_800667_800761_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_804464_809411
WTC11_00014103	chr11	-	1122	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	-261	15	-261	-15	multi-exon	FALSE	canonical	3	3246	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCCACTGCAGTGAA	-842775	False	NA	-18	True	GGGGCT	-27	NA	842790	839735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_840481_842413
WTC11_00014104	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_12	128.784919752103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	-903334	True	NA	NA	False	NA	NA	NA	910810	867858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
WTC11_00014108	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	194.016783801542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903359	True	NA	-12	True	AATACA	-24	NA	910835	869761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
WTC11_00014111	chr11	-	2542	11	NNC	ENSG00000177830.18	novel	1019	9	NA	NA	17	1493	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	368.623710577602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACTTTTCTGGAGAAC	-903298	True	NA	28	True	NA	NA	NA	910774	880834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_881475_881656_882516_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910640
WTC11_00014117	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	15.1182009511714	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-1306373	True	NA	-1	True	AATAAA	-21	NA	1309632	1274370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
WTC11_00014118	chr11	-	684	5	FSM	ENSG00000078902.16	ENST00000530541.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	120.412572018041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGACATGTTCCCCAAC	-1306364	True	NA	NA	False	NA	NA	NA	1309623	1277154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1309465
WTC11_00014119	chr11	-	499	3	FSM	ENSG00000078902.16	ENST00000527746.5	590	3	0	91	0	-91	multi-exon	FALSE	canonical	3	262	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGGCTGCCGTGGGG	-1306331	True	NA	NA	False	NA	NA	NA	1309590	1290185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1290410_1295644_1295795_1309465
WTC11_00014121	chr11	-	1697	2	FSM	ENSG00000182208.15	ENST00000531976.1	3174	2	1477	0	1477	0	multi-exon	FALSE	canonical	3	98	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTGTACGTCTCAGC	-1471860	False	NA	-7	True	AATAAA	-19	NA	1471959	1469456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1470489_1471294
WTC11_00014122	chr11	-	699	4	ISM	ENSG00000182208.15	ENST00000329957.7	1745	5	5892	715	-2	73	3prime_fragment	FALSE	canonical	3	75	junction_3	9.7410927974683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCGGGCCGGACAGGG	NA	False	NA	NA	False	NA	NA	NA	1480887	1470171	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724
WTC11_00014123	chr11	-	4821	7	FSM	ENSG00000184545.11	ENST00000397374.8	4824	7	0	3	0	-3	multi-exon	FALSE	canonical	2	9	junction_5	3.40342964277702	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCACGACTCCGCGCCT	NA	False	NA	-11	True	AATAAA	-17	NA	1572271	1554053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1557575_1557793_1557918_1558111_1558272_1558888_1559056_1563850_1563990_1565595_1565935_1571900
WTC11_00014124	chr11	-	2055	9	FSM	ENSG00000117984.15	ENST00000236671.7	2055	9	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_6	36.3309441110467	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTGTGCTCTTGTG	-1755161	True	NA	-5	True	AATACA	-25	NA	1763927	1752754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
WTC11_00014125	chr11	-	4415	8	FSM	ENSG00000117984.15	ENST00000637381.2	4408	8	0	-7	0	0	multi-exon	FALSE	canonical	3	1031	junction_6	17.9432211064087	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTGTGCTCTTGTG	-1755198	True	NA	-5	True	AATACA	-25	NA	1763964	1752754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308
WTC11_00014127	chr11	-	2202	5	FSM	ENSG00000130600.20	ENST00000414790.7	2353	5	145	6	106	-1	multi-exon	FALSE	canonical	2	9	junction_4	16.2845785944863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTCGAGGACTCTGG	-1997605	False	NA	NA	False	AATAAA	-14	NA	1997730	1995176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_1996517
WTC11_00014128	chr11	-	949	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	-320	-194	-320	14	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTATTTCTAACAC	NA	False	NA	NA	False	AATAAA	-31	NA	2336069	2335120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2335100_2336100
WTC11_00014129	chr11	-	2722	17	NNC	ENSG00000205531.13	novel	2463	16	NA	NA	0	70898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	609.985344982771	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGAAAGAAATAGGG	-2977108	False	NA	NA	False	NA	NA	NA	2992102	2873532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2873558_2944435_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
WTC11_00014130	chr11	-	2600	17	NNC	ENSG00000205531.13	novel	2463	16	NA	NA	-63	70898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	567.14513960273	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGAAAGAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	2992440	2873532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2873558_2944435_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
WTC11_00014131	chr11	-	1936	3	FSM	ENSG00000129757.15	ENST00000430149.3	1930	3	0	-6	0	1	multi-exon	FALSE	canonical	3	96	junction_2	36.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTGTGCCTG	-2885751	False	NA	0	True	AATAAA	-27	NA	2885765	2883211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2884669
WTC11_00014132	chr11	-	1937	3	FSM	ENSG00000129757.15	ENST00000414822.8	1936	3	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_1	41	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTGTGCCTG	-2885757	False	NA	0	True	AATAAA	-27	NA	2885771	2883211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883911_2883998_2884135_2884669
WTC11_00014133	chr11	-	1779	4	FSM	ENSG00000129757.15	ENST00000440480.8	1773	4	0	-6	0	1	multi-exon	FALSE	canonical	3	96	junction_2	35.9103822808329	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTGTGCCTG	-2885761	False	NA	0	True	AATAAA	-27	NA	2885775	2883211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2884669_2885467_2885633
WTC11_00014134	chr11	-	1193	4	FSM	ENSG00000129757.15	ENST00000380725.2	1193	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	66.5131565932636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGCCGAAAAATGCTGC	-2885735	False	NA	-28	True	NA	NA	NA	2885749	2883239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2885201_2885467_2885633
WTC11_00014135	chr11	-	791	4	FSM	ENSG00000129757.15	ENST00000647251.1	775	4	0	-16	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.2234187935065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAATAAAAAAACCAT	-2885714	False	NA	-49	True	AAAAAG	-18	NA	2885728	2883615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883911_2883998_2884135_2885201_2885467_2885633
WTC11_00014136	chr11	-	929	2	FSM	ENSG00000181649.8	ENST00000314222.5	920	2	-24	15	-24	-15	multi-exon	FALSE	canonical	3	84	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGTCATCTGCTGGGC	NA	False	NA	-17	True	AATAAA	-3	NA	2929444	2928287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2928668_2928895
WTC11_00014137	chr11	-	2483	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_5	407.952678328139	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTGGGTCTTTGCAG	-2977383	True	NA	0	True	ATTAAA	-26	NA	2992377	2944426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
WTC11_00014147	chr11	-	312	1	FSM	ENSG00000207008.1	ENST00000384281.1	123	1	2	-191	2	191	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGATGTACCTGTATC	-2963832	False	NA	NA	False	NA	NA	NA	2963891	2963579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2963600_2963900
WTC11_00014151	chr11	-	2501	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	-10	0	3	multi-exon	FALSE	canonical	3	194	junction_1	94.7829600920414	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTCTGCATGTTCAG	-3049792	True	NA	1	True	AATAAA	-27	NA	3057418	3000918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
WTC11_00014152	chr11	-	2747	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	-10	0	3	multi-exon	FALSE	canonical	3	85	junction_21	152.40881978123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTCTGCATGTTCAG	-3049797	True	NA	1	True	AATAAA	-27	NA	3057423	3000918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
WTC11_00014153	chr11	-	2808	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	-3	0	3	multi-exon	FALSE	canonical	3	57	junction_20	182.198607691245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTCTGCATGTTCAG	-3049811	True	NA	1	True	AATAAA	-27	NA	3057437	3000918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
WTC11_00014154	chr11	-	2529	22	FSM	ENSG00000110619.18	ENST00000397111.9	2685	22	159	-3	-13	3	multi-exon	FALSE	canonical	3	434	junction_1	53.3082423972409	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTCTGCATGTTCAG	-3049828	True	NA	1	True	AATAAA	-27	NA	3057454	3000918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
WTC11_00014155	chr11	-	2671	5	FSM	ENSG00000110619.18	ENST00000466442.6	2671	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	251.683829436855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTCTCTGTCTTGTTC	-3008885	False	NA	-10	True	AATAAA	-16	NA	3008897	3000929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002175_3002540_3002601_3005365_3005434_3006878
WTC11_00014159	chr11	-	3854	22	FSM	ENSG00000021762.20	ENST00000263650.12	3854	22	-41	41	1	-27	multi-exon	TRUE	canonical	3	23	junction_14	7.10402140913201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAATAAACAGACACAT	-3164606	True	NA	-40	True	NA	NA	NA	3165351	3087147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3120420_3120625_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
WTC11_00014160	chr11	-	2680	20	FSM	ENSG00000021762.20	ENST00000525498.5	2733	20	53	0	39	0	multi-exon	FALSE	canonical	1	1	junction_16	10.4322109320483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTTGCCATGGGG	NA	False	NA	NA	False	NA	NA	NA	3126555	3087905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3120543_3120625_3121996_3122099_3122347_3122429_3126472
WTC11_00014164	chr11	-	2511	5	NNC	ENSG00000005801.18	novel	2021	5	NA	NA	0	6573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.735907178309	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACACAATAAAGATGGA	-3372631	True	NA	NA	False	AAAAAG	-7	NA	3379116	3351353	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3351383_3358385_3360566_3370974_3371071_3371576_3371704_3379037
WTC11_00014165	chr11	-	3183	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	4	0	-3	multi-exon	FALSE	canonical	2	8	junction_2	175.455521429221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTTGGGTCTCTTCAT	-3372661	True	NA	-18	True	AATAAA	-11	NA	3379146	3357930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
WTC11_00014166	chr11	-	3039	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	-73	4	0	-3	multi-exon	FALSE	canonical	3	340	junction_3	40.2326567189723	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTTGGGTCTCTTCAT	-3372733	True	NA	-18	True	AATAAA	-11	NA	3379218	3357930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
WTC11_00014167	chr11	-	3337	7	FSM	ENSG00000005801.18	ENST00000620374.4	3342	7	2	3	-2	-3	multi-exon	FALSE	canonical	2	8	junction_2	142.783927666947	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTTGGGTCTCTTCAT	-3372735	True	NA	-18	True	AATAAA	-11	NA	3379220	3357930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
WTC11_00014168	chr11	-	3140	5	FSM	ENSG00000005801.18	ENST00000343338.11	3145	5	2	3	-2	-3	multi-exon	FALSE	canonical	3	5	junction_4	178.18161381018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTTGGGTCTCTTCAT	-3372735	True	NA	-18	True	AATAAA	-11	NA	3379220	3357930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373676_3379037
WTC11_00014169	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	168.639259960426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-3372733	True	NA	63	True	AATATA	-43	NA	3379218	3358944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
WTC11_00014171	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	138.743792653942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	-3372661	True	NA	-55	True	NA	NA	NA	3379146	3359116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
WTC11_00014183	chr11	-	3052	1	Genic_Genomic	ENSG00000166492.9	novel	NA	NA	NA	NA	10685	1592	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGACTCCCGCAGGTT	NA	False	NA	NA	False	NA	NA	NA	3411811	3408759	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_3408800_3411800
WTC11_00014184	chr11	-	3936	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	5745	-2464	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGGTGGGAGGATAGC	NA	False	NA	NA	False	NA	NA	NA	3416751	3412815	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3412800_3416800
WTC11_00014185	chr11	-	4358	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	1262	-6525	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGTCCTCGAACT	NA	False	NA	NA	False	NA	NA	NA	3421234	3416876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3416900_3421200
WTC11_00014186	chr11	-	209	1	FSM	ENSG00000284639.1	ENST00000641667.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCTGG	-3580618	False	NA	NA	False	NA	NA	NA	3581135	3580926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3580900_3581100
WTC11_00014187	chr11	-	6673	34	NNC	ENSG00000110713.17	novel	6837	34	NA	NA	0	64776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.3392122714646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAATAATAGTAATAATA	-3797425	False	NA	NA	False	NA	NA	NA	3797458	3606306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3606344_3675012_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014188	chr11	-	6825	35	NNC	ENSG00000110713.17	novel	6837	34	NA	NA	0	64776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.930989214147	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAATAATAGTAATAATA	-3782114	True	NA	NA	False	NA	NA	NA	3797541	3606306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3606344_3675012_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3704745_3704839_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760562_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014189	chr11	-	1246	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	-5	-9	-5	9	multi-exon	FALSE	canonical	3	24	junction_1	4.32049379893857	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	-3641532	True	NA	-4	True	ATTAAA	-27	NA	3641997	3638502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
WTC11_00014191	chr11	-	6735	33	FSM	ENSG00000110713.17	ENST00000324932.12	6726	33	0	-9	0	1	multi-exon	FALSE	canonical	3	225	junction_23	40.3451902337813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTTCCCTTTGTATTT	-3782127	True	NA	-5	True	AATAAA	-26	NA	3797554	3675009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014192	chr11	-	6964	33	FSM	ENSG00000110713.17	ENST00000359171.8	7023	33	57	2	57	-2	multi-exon	FALSE	canonical	3	44	junction_23	61.1858002189846	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTTTCCCTTTGTA	NA	False	NA	-8	True	AATAAA	-23	NA	3797735	3675012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014193	chr11	-	5628	32	FSM	ENSG00000110713.17	ENST00000355260.7	5628	32	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	64.7484205248117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTACCCTGGCCCTTT	-3797425	False	NA	69	True	NA	NA	NA	3797458	3675798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014198	chr11	-	3914	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	9	0	-9	multi-exon	FALSE	canonical	3	225	junction_10	33.1723443870487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGGAAAGAGTCAGATGG	-3782114	True	NA	NA	False	TATAAA	-13	NA	3797541	3711561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
WTC11_00014203	chr11	-	1300	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	-5	0	5	multi-exon	FALSE	canonical	3	79	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTCCCTGTGTGCTGG	-3836449	True	NA	-3	True	AATAAA	-23	NA	3840959	3826972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3828207_3840893
WTC11_00014204	chr11	-	1949	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	-14	0	14	multi-exon	FALSE	canonical	3	105	junction_3	11.8988794990677	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTCCTTGTTCCTTAA	-4392184	True	NA	0	True	AATAAA	-37	NA	4393702	4384882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
WTC11_00014205	chr11	-	1941	7	NNC	ENSG00000132109.10	novel	1935	7	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_1	46.2637366987723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTATCCCATT	-4392188	True	NA	-17	True	AATAAA	-20	NA	4393706	4384899	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_4385854_4386151_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
WTC11_00014206	chr11	-	3324	7	FSM	ENSG00000167333.13	ENST00000300747.10	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	4.10960933531265	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGACTGCTTCTTGAG	-4607415	True	NA	0	True	AATAAA	-19	NA	4608231	4598671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4605078_4605562_4608026
WTC11_00014207	chr11	-	874	6	FSM	ENSG00000167333.13	ENST00000526337.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	18.3237550736742	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTCTGAGTGGGGCCT	-4607415	True	NA	NA	False	NA	NA	NA	4608231	4600638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4608026
WTC11_00014208	chr11	-	553	4	FSM	ENSG00000167333.13	ENST00000531644.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	21.7715410570772	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGCCCTGTAGGGGA	-4607360	True	NA	NA	False	NA	NA	NA	4608176	4601640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4601687_4602151_4602413_4603244_4603341_4608026
WTC11_00014209	chr11	-	2330	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11093	-4009	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	25	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTACTTCTTTATTAA	-5165496	True	NA	NA	False	NA	NA	NA	5165850	5150832	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_5152691_5163485_5163665_5165557
WTC11_00014210	chr11	-	706	3	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	21.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCCACTCCTATCTCCC	-5165496	True	NA	-89	True	TATAAA	-2	NA	5165850	5160422	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5163485_5163665_5165557
WTC11_00014211	chr11	-	3331	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	33	0	-33	multi-exon	FALSE	canonical	3	119	junction_7	19.5625631641414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTTTTTGAATAGCTTC	-5683519	True	NA	NA	False	AATAAA	-31	NA	5685074	5663227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
WTC11_00014212	chr11	-	3245	7	NIC	ENSG00000132256.20	novel	3364	8	NA	NA	25	-39	intron_retention	FALSE	canonical	2	9	junction_3	59.4577347552211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAACGAGTTTTTTGAAT	-5683462	True	NA	NA	False	AATAAA	-25	NA	5685017	5663233	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_5665396_5665655_5665683_5665980_5666082_5678203_5678435_5679073_5679170_5679760_5680239_5684867
WTC11_00014213	chr11	-	2870	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	-8	0	0	multi-exon	FALSE	canonical	3	80	junction_7	32.2262410504995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTATCTAAGTGTCTTG	-5683542	True	NA	34	True	AATAAA	-16	NA	5685097	5663563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
WTC11_00014214	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	21.0211533672367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	-5683487	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
WTC11_00014218	chr11	-	1438	1	FSM	ENSG00000267940.1	ENST00000600308.1	1353	1	-91	6	-91	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATATGCTTGTTCACA	NA	False	NA	-9	True	AATAAA	-9	NA	6203344	6201906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6201900_6203300
WTC11_00014219	chr11	-	4246	3	FSM	ENSG00000051009.11	ENST00000529360.1	1309	3	-2926	-11	460	11	multi-exon	FALSE	canonical	3	98	junction_2	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	NA	False	NA	1	True	TATAAA	-25	NA	6218281	6211333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6211868_6214410_6214574_6214732
WTC11_00014220	chr11	-	3375	12	FSM	ENSG00000051009.11	ENST00000449352.7	3364	12	0	-11	0	11	multi-exon	FALSE	canonical	3	61	junction_4	31.3323955079158	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	-6232362	True	NA	1	True	TATAAA	-25	NA	6234636	6211333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
WTC11_00014222	chr11	-	3327	9	FSM	ENSG00000051009.11	ENST00000524416.1	3327	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	33.9132625236794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAACCAACC	-6232389	True	NA	NA	False	NA	NA	NA	6234663	6216569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
WTC11_00014223	chr11	-	1092	3	NNC	ENSG00000170955.10	novel	957	3	NA	NA	0	36705	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAAACAAACAAGCAAA	-6317655	True	NA	NA	False	NA	NA	NA	6320532	6282240	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_6282274_6318945_6319565_6320092
WTC11_00014224	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6320043	False	NA	-4	True	AATAAA	-17	NA	6320062	6318945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319565_6319656
WTC11_00014225	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6317624	True	NA	-4	True	AATAAA	-17	NA	6320501	6318945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319565_6320092
WTC11_00014227	chr11	-	971	3	FSM	ENSG00000170955.10	ENST00000530979.1	957	3	0	-14	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTCCCAAAATAAATCC	-6317655	True	NA	-34	True	NA	NA	NA	6320532	6319129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319565_6319656_6319753_6320092
WTC11_00014228	chr11	-	2819	13	NNC	ENSG00000110171.21	novel	2838	12	NA	NA	0	56126	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8175127673655	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGCCAGGAGCAGTAG	-6469443	False	4450	NA	False	NA	NA	NA	6473893	6392486	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_6392516_6448612_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
WTC11_00014229	chr11	-	1007	2	NIC	ENSG00000166313.20	novel	1229	3	NA	NA	326	20	intron_retention	FALSE	canonical	3	386	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACCATCAACCCATT	NA	False	NA	-12	True	AATAAA	-36	NA	6396248	6395104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_6395963_6396099
WTC11_00014231	chr11	-	2656	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	-20	0	20	multi-exon	TRUE	canonical	1	118	junction_5	63.2973633970464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACCATCAACCCATT	-6415650	True	NA	-12	True	AATAAA	-36	NA	6419070	6395104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
WTC11_00014232	chr11	-	2639	14	FSM	ENSG00000166313.20	ENST00000311051.7	2619	14	0	-20	0	20	multi-exon	FALSE	canonical	1	5	junction_13	105.014735511528	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACCATCAACCCATT	-6419375	False	NA	-12	True	AATAAA	-36	NA	6419414	6395104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6419345
WTC11_00014235	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	11.1799702833769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-6469491	False	4450	0	True	AATAAA	-15	NA	6473941	6448612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
WTC11_00014236	chr11	-	3007	13	FSM	ENSG00000110171.21	ENST00000359518.7	3042	13	39	-4	-4	0	multi-exon	FALSE	canonical	3	8	junction_11	26.2043253427114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-6469495	False	4450	0	True	AATAAA	-15	NA	6473945	6448612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473083_6473249_6473790
WTC11_00014238	chr11	-	651	3	FSM	ENSG00000110171.21	ENST00000530724.1	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	6.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGGAGGACGAGAGTGT	NA	False	NA	NA	False	ATTAAA	-7	NA	6451299	6450168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6450622_6450891_6451061_6451270
WTC11_00014239	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	46.1917034692136	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	-6476862	True	NA	NA	False	NA	NA	NA	6481312	6475679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
WTC11_00014240	chr11	-	2602	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	-839	0	0	multi-exon	FALSE	canonical	3	146	junction_7	47.0440523035894	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	-6476881	True	NA	NA	False	NA	NA	NA	6481331	6475679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
WTC11_00014241	chr11	-	2316	7	NIC	ENSG00000132254.13	novel	1763	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	146	junction_6	50.7961612722851	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-6476985	True	NA	NA	False	AATAAA	-16	NA	6481435	6476518	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
WTC11_00014242	chr11	-	852	7	FSM	ENSG00000132254.13	ENST00000525235.1	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	108.715863096831	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGACACGCTCATGACT	-6476864	True	NA	NA	False	NA	NA	NA	6481314	6478083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6478199_6478578_6478653_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
WTC11_00014244	chr11	-	7673	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	37	-1151	0	1151	multi-exon	FALSE	canonical	3	83	junction_4	9.3407708461347	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTCTTATTATATGTG	-6603538	False	14814	NA	False	NA	NA	NA	6603579	6593920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
WTC11_00014245	chr11	-	726	4	FSM	ENSG00000132275.11	ENST00000534343.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	47.2534537244516	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	-6603538	False	14814	-5	True	AATAAA	-19	NA	6603579	6599919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6603403
WTC11_00014247	chr11	-	956	3	FSM	ENSG00000132275.11	ENST00000530762.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	48	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACCCTGAGGCTTTTC	-6603556	False	14814	NA	False	AATGAA	-45	NA	6603597	6601253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6601603_6601851_6602265_6603403
WTC11_00014248	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_4	82.9559370991613	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-6597402	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
WTC11_00014249	chr11	-	3540	12	FSM	ENSG00000166340.18	ENST00000533371.6	3578	12	47	-9	4	5	multi-exon	FALSE	canonical	0	0	junction_5	59.9436374390267	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCTCATTCGTTGTGAT	-6618253	False	NA	-8	True	ATTAAA	-24	NA	6619349	6612762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195
WTC11_00014250	chr11	-	3497	13	FSM	ENSG00000166340.18	ENST00000299427.12	3492	13	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_5	57.6793699880835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCTCATTCGTTGTGAT	-6618326	True	NA	-8	True	ATTAAA	-24	NA	6619422	6612762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
WTC11_00014251	chr11	-	3808	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	-21	0	5	multi-exon	FALSE	canonical	0	0	junction_5	62.6932213241591	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCTCATTCGTTGTGAT	-6618333	True	NA	-8	True	ATTAAA	-24	NA	6619429	6612762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
WTC11_00014252	chr11	-	3661	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	-21	0	5	multi-exon	FALSE	canonical	0	0	junction_5	60.1925285718067	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCTCATTCGTTGTGAT	-6618333	True	NA	-8	True	ATTAAA	-24	NA	6619429	6612762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
WTC11_00014253	chr11	-	3620	12	FSM	ENSG00000166340.18	ENST00000644831.1	3620	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	59.8039496747014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAATGTCTGCTACAC	-6618333	True	NA	-39	True	NA	NA	NA	6619429	6612793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
WTC11_00014259	chr11	-	10750	21	FSM	ENSG00000166341.9	ENST00000299441.5	10713	21	-36	-1	-36	1	multi-exon	FALSE	canonical	3	10	junction_12	13.6897772078292	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCCAGCTTTGTTCT	-6655423	True	NA	-8	True	AATAAA	-14	NA	6655845	6621328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6624391_6624729_6624869_6625197_6625482_6625596_6625728_6625919_6626075_6626168_6626381_6626551_6626666_6626788_6627668_6628620_6628831_6629451_6629578_6629671_6629912_6629998_6630864_6631052_6631211_6631310_6631408_6631615_6631810_6632030_6633057_6633411_6633649_6633788_6634021_6634117_6634307_6639816_6641734_6655562
WTC11_00014260	chr11	-	2435	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	-130	0	130	multi-exon	FALSE	canonical	3	841	junction_2	26.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGGCAGATCATAAGGT	-6673090	True	NA	NA	False	NA	NA	NA	6683340	6680254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6682403_6682746_6682816_6683122
WTC11_00014261	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	-6673046	True	NA	-49	True	AATAGA	-4	NA	6683296	6681950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6682403_6682746
WTC11_00014262	chr11	-	4901	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGTCTTAATTTTCCT	-7019835	True	NA	NA	False	AATAAA	-31	NA	7020346	6997075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7001556_7002708_7002856_7020072
WTC11_00014263	chr11	-	1341	10	FSM	ENSG00000166394.15	ENST00000524790.5	1338	10	0	-3	0	3	multi-exon	FALSE	canonical	3	10	junction_1	121.930561092759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGCTCTGTGG	-7670206	False	3266	0	True	AATAAA	-23	NA	7673472	7665096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
WTC11_00014264	chr11	-	1256	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	-7	0	3	multi-exon	FALSE	canonical	3	19	junction_8	84.0680527905815	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGCTCTGTGG	-7670234	False	3266	0	True	AATAAA	-23	NA	7673500	7665096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
WTC11_00014265	chr11	-	1665	9	FSM	ENSG00000166394.15	ENST00000533558.5	1658	9	0	-7	0	3	multi-exon	FALSE	canonical	3	22	junction_8	83.0924748397832	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGCTCTGTGG	-7670942	True	NA	0	True	AATAAA	-23	NA	7674208	7665096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673717
WTC11_00014266	chr11	-	1508	9	NNC	ENSG00000166394.15	novel	1249	9	NA	NA	-330	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	91.700599779936	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGCCCATGAAGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	7674573	7665106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_7665547_7666450_7666547_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
WTC11_00014268	chr11	-	1202	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	100	junction_8	57.9254639601618	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGAAGTGTGGCTC	-7670992	True	NA	-5	True	AATAAA	-18	NA	7674258	7665101	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
WTC11_00014272	chr11	-	1797	4	NNC	ENSG00000254951.7	novel	2503	8	NA	NA	-9576	-18196	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.39934634239519	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGTATGTTCAAGTG	NA	False	NA	-22	True	AATAAA	-19	NA	7915531	7899176	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_7900512_7905602_7905826_7908650_7908724_7915365
WTC11_00014273	chr11	-	4026	2	FSM	ENSG00000182261.5	ENST00000328600.3	4237	2	117	94	117	-94	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGAGAGGGTATATAGG	NA	False	NA	NA	False	NA	NA	NA	7963540	7957630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7961323_7963206
WTC11_00014274	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	14.2407864951343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
WTC11_00014275	chr11	-	1171	5	FSM	ENSG00000166405.15	ENST00000524799.5	1171	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	4.71036092035419	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCTGGTGAGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	8138559	8110243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8110408_8110658_8111138_8126658_8126805_8137377_8137472_8138271
WTC11_00014278	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8167110	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8140194_8168865
WTC11_00014280	chr11	-	1527	14	NNC	ENSG00000130413.16	novel	635	7	NA	NA	33	17484	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	28.3715834165478	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTTGTGGTATTTTAT	-8592834	True	NA	NA	False	AATAAA	-19	NA	8594195	8374383	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_8374509_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8474817_8477249_8477284_8594082
WTC11_00014282	chr11	-	1248	6	FSM	ENSG00000130413.16	ENST00000444064.6	1243	6	0	-5	0	-3	multi-exon	FALSE	canonical	3	6	junction_1	30.897249068485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATTAATTTTTATGTT	NA	False	NA	-10	True	AATAAA	-16	NA	8454794	8391873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743
WTC11_00014284	chr11	-	3217	12	FSM	ENSG00000130413.16	ENST00000447869.5	3103	12	-107	-7	-107	4	multi-exon	FALSE	canonical	3	61	junction_9	8.01238710419298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTTAACAAGAGGT	NA	False	NA	0	True	AATAAA	-26	NA	8475931	8391863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680
WTC11_00014285	chr11	-	2648	15	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_12	22.6265150580789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATTAATTTTTATGTT	-8592928	False	NA	-10	True	AATAAA	-16	NA	8594289	8391873	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8476686_8476752_8477249_8477284_8594082
WTC11_00014287	chr11	-	4440	20	FSM	ENSG00000166444.19	ENST00000313726.11	4341	20	1	-100	0	99	multi-exon	FALSE	canonical	3	27	junction_19	52.6986414853783	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATTAAGGGGTTAGCT	-8809924	True	NA	94	True	NA	NA	NA	8810673	8693251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8810516
WTC11_00014290	chr11	-	1689	2	FSM	ENSG00000166444.19	ENST00000524513.1	602	2	-238	-849	-238	138	multi-exon	FALSE	canonical	3	185	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGAAATGGAGTTCTC	-8696211	False	NA	NA	False	NA	NA	NA	8696233	8693212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8694131_8695462
WTC11_00014297	chr11	-	538	5	FSM	ENSG00000166444.19	ENST00000534665.5	659	5	121	0	107	0	multi-exon	TRUE	canonical	2	9	junction_3	14.9749791318719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTCCACCTCCAGTTCT	-8871219	False	NA	NA	False	NA	NA	NA	8871246	8731199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8731210_8750620_8750726_8811246_8811336_8839309_8839351_8870953
WTC11_00014298	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	17.9495821678389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-8962780	True	NA	83	True	TATAAA	-17	NA	8964442	8947201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
WTC11_00014299	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.3136337176714	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-8962779	True	NA	-9	True	AATAAA	-19	NA	8964441	8947293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
WTC11_00014302	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.62476052848859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	-9003610	True	NA	-3	True	AATAAA	-19	NA	9004001	8980575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
WTC11_00014303	chr11	-	457	3	FSM	ENSG00000175352.11	ENST00000531142.1	551	3	0	94	0	-33	multi-exon	FALSE	canonical	3	22	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTGAATTTGGCAT	NA	False	NA	NA	False	NA	NA	NA	8985756	8983611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8983970_8984071_8984125_8985710
WTC11_00014304	chr11	-	953	3	FSM	ENSG00000175356.14	ENST00000524317.1	2322	3	1369	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9025821	9020444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9021198_9021875_9021956_9025701
WTC11_00014305	chr11	-	359	3	FSM	ENSG00000175356.14	ENST00000519535.1	738	3	379	0	379	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACACCGAGTGTACGT	NA	False	NA	NA	False	NA	NA	NA	9030881	9027488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9027562_9029883_9030046_9030757
WTC11_00014309	chr11	-	6111	15	FSM	ENSG00000184014.9	ENST00000679458.1	6097	15	0	-14	0	0	multi-exon	FALSE	canonical	3	150	junction_2	35.5114238589471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGATCACTGATTTT	-9174074	False	NA	NA	False	AATAAA	-17	NA	9174084	9138824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626
WTC11_00014310	chr11	-	4294	19	FSM	ENSG00000184014.9	ENST00000681158.1	4272	19	0	-22	0	0	multi-exon	FALSE	canonical	3	10	junction_6	66.4706609372293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGATCACTGATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	9206752	9138824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9144096_9144279_9144994_9145114_9145669_9145816_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672
WTC11_00014311	chr11	-	4377	20	FSM	ENSG00000184014.9	ENST00000680252.1	4358	20	0	-19	0	0	multi-exon	FALSE	canonical	3	10	junction_7	52.886173698057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGATCACTGATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	9206752	9138824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672
WTC11_00014313	chr11	-	4820	24	FSM	ENSG00000184014.9	ENST00000679568.1	4796	24	0	-24	0	0	multi-exon	FALSE	canonical	2	2	junction_2	61.7904257209404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGATCACTGATTTT	-9265077	False	NA	NA	False	AATAAA	-17	NA	9265119	9138824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9140188_9140249_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
WTC11_00014315	chr11	-	4995	23	FSM	ENSG00000184014.9	ENST00000328194.8	4991	23	0	-4	0	4	multi-exon	TRUE	canonical	3	150	junction_2	31.7339469406147	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATCACTGATTTTTATG	-9262918	True	NA	NA	False	AATAAA	-21	NA	9265350	9138820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
WTC11_00014316	chr11	-	4539	21	FSM	ENSG00000184014.9	ENST00000680294.1	4527	21	0	-12	0	0	multi-exon	FALSE	canonical	3	11	junction_2	51.1229889580021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGAAACAAAAACTGCAT	-9265077	False	NA	NA	False	AATAAA	-3	NA	9265119	9138838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
WTC11_00014320	chr11	-	2220	4	FSM	ENSG00000184014.9	ENST00000532696.2	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	17.326921891156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAAAGTTTCTCTGGT	-9264950	False	NA	42	True	NA	NA	NA	9264992	9202311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9204318_9206672_9206783_9207560_9207633_9264960
WTC11_00014321	chr11	-	3797	8	NNC	ENSG00000166471.11	novel	1443	8	NA	NA	0	50423	intron_retention	FALSE	non_canonical	0	0	junction_1	113.138167290969	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTAGTTTTACATGAAAT	-9307613	True	NA	NA	False	AAAAAG	-43	NA	9314567	9230230	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_9230260_9280657_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
WTC11_00014322	chr11	-	3947	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	-149	0	149	multi-exon	FALSE	canonical	3	273	junction_4	22.4158921799294	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCCGTCTCTACT	-9307639	True	NA	NA	False	NA	NA	NA	9314593	9280504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
WTC11_00014323	chr11	-	1921	4	ISM	ENSG00000166471.11	ENST00000299596.8	1443	8	25695	0	-799	0	intron_retention	FALSE	canonical	3	63	junction_1	129.206123005925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-9288859	False	NA	-4	True	AATAAA	-21	NA	9288872	9280653	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701
WTC11_00014324	chr11	-	1592	8	FSM	ENSG00000166471.11	ENST00000299596.8	1443	8	0	-149	0	149	multi-exon	FALSE	canonical	3	63	junction_1	91.5561609737155	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCCGTCTCTACT	-9307613	True	NA	NA	False	NA	NA	NA	9314567	9280504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
WTC11_00014325	chr11	-	3997	7	FSM	ENSG00000166471.11	ENST00000524543.5	3848	7	0	-149	0	149	multi-exon	FALSE	canonical	3	10	junction_4	118.489099357986	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCCGTCTCTACT	-9307682	True	NA	NA	False	NA	NA	NA	9314636	9280504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288543_9295258_9295388_9299583_9299702_9314320
WTC11_00014328	chr11	-	744	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	-21	0	21	multi-exon	FALSE	canonical	3	308	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGTCTGAATATTTA	-9307679	True	NA	NA	False	ATTAAA	-45	NA	9314633	9295074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9295388_9299583_9299702_9314320
WTC11_00014329	chr11	-	1129	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	27	-9	27	9	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTTTTGTTTGTTTGT	-9460044	True	NA	7	True	AATAAA	-23	NA	9460675	9459546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9459500_9460700
WTC11_00014330	chr11	-	7572	40	FSM	ENSG00000133812.18	ENST00000256190.13	7450	40	0	-122	0	122	multi-exon	TRUE	canonical	3	44	junction_12	29.4587823128913	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGGCCAAGATTCTCA	-10290460	True	NA	NA	False	NA	NA	NA	10294219	9778545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9780517_9781506_9781639_9784350_9784439_9785124_9785319_9787633_9787739_9789108_9789343_9790555_9790684_9795830_9795958_9807999_9808186_9808900_9809003_9812531_9812709_9816839_9817025_9829355_9829497_9832223_9832421_9839497_9839697_9842624_9842771_9845564_9845741_9846955_9847084_9850022_9850219_9852675_9852750_9853539_9853713_9856457_9856721_9858225_9858397_9895942_9896012_9961956_9962107_9963772_9963883_9968340_9968546_9989496_9989596_9992414_9992544_9992989_9993104_9993920_9993999_9998265_9998380_10000913_10001023_10002556_10002690_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
WTC11_00014331	chr11	-	7668	41	FSM	ENSG00000133812.18	ENST00000689128.1	7279	41	-91	-298	0	122	multi-exon	FALSE	canonical	3	16	junction_12	31.4122189601435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGGCCAAGATTCTCA	-10290460	True	NA	NA	False	NA	NA	NA	10294219	9778545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9780517_9781506_9781639_9784350_9784439_9785124_9785319_9787633_9787739_9789108_9789343_9790555_9790684_9795830_9795958_9807999_9808186_9808900_9809003_9812531_9812709_9816839_9817025_9828125_9828222_9829355_9829497_9832223_9832421_9839497_9839697_9842624_9842771_9845564_9845741_9846955_9847084_9850022_9850219_9852675_9852750_9853539_9853713_9856457_9856721_9858225_9858397_9895942_9896012_9961956_9962107_9963772_9963883_9968340_9968546_9989496_9989596_9992414_9992544_9992989_9993104_9993920_9993999_9998265_9998380_10000913_10001023_10002556_10002690_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
WTC11_00014335	chr11	-	208	1	FSM	ENSG00000254719.1	ENST00000532615.1	208	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGAGAGAAGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	10272259	10272051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10272100_10272300
WTC11_00014336	chr11	-	1125	1	FSM	ENSG00000255823.5	ENST00000536684.3	1293	1	175	-7	175	7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTAGCTGGACAGACTA	NA	False	NA	NA	False	NA	NA	NA	10509011	10507886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10507900_10509000
WTC11_00014337	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	8.44748483277715	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	-10538458	True	NA	-12	True	ATTAAA	-16	NA	10541187	10511672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
WTC11_00014339	chr11	-	3655	21	FSM	ENSG00000110321.19	ENST00000525681.6	3654	21	0	-1	0	1	multi-exon	FALSE	canonical	3	5524	junction_20	421.730894647286	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGATGTGTGGCTGTAAA	-10807394	False	NA	-34	True	AATAAA	-18	NA	10807462	10797051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254
WTC11_00014340	chr11	-	6769	15	FSM	ENSG00000110321.19	ENST00000532383.5	6769	15	0	0	0	0	multi-exon	FALSE	canonical	3	5941	junction_8	407.691841658749	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10807960	False	NA	-36	True	AATAAA	-16	NA	10808028	10797053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10804051_10804136_10804204_10804286_10805016_10805906
WTC11_00014341	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_21	454.056356197306	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10736210	True	NA	-36	True	AATAAA	-16	NA	10808926	10797053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
WTC11_00014342	chr11	-	983	3	FSM	ENSG00000110321.19	ENST00000525606.5	690	3	265	-558	0	0	multi-exon	FALSE	canonical	3	6882	junction_2	32.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	-10799344	False	NA	-74	True	NA	NA	NA	10799361	10797169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212
WTC11_00014343	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_8	1237.18492857778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	-10808640	False	NA	-74	True	NA	NA	NA	10808708	10797169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
WTC11_00014344	chr11	-	591	4	FSM	ENSG00000110321.19	ENST00000534272.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	3293.45060519949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTTTGTTAAAAAT	-10800227	False	167	NA	False	NA	NA	NA	10800295	10798991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10799114_10799212_10799425_10799551_10799757_10800243
WTC11_00014358	chr11	-	2820	3	FSM	ENSG00000236287.8	ENST00000413761.7	2687	3	0	-133	0	131	multi-exon	FALSE	canonical	3	116	junction_1	14.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTCTACTCTGCAG	-10854822	True	NA	NA	False	NA	NA	NA	10858053	10852572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10855087_10856143_10856258_10857861
WTC11_00014360	chr11	-	2791	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	20	-70	0	70	multi-exon	FALSE	canonical	3	29	junction_1	58	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCCAAGATAAAGTCCCA	-10854822	True	NA	69	True	TTTAAA	-31	NA	10858053	10852633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10855119_10856143_10856258_10857861
WTC11_00014361	chr11	-	3517	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	-93	-1912	-93	-1	multi-exon	FALSE	canonical	3	20	junction_1	62.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTATTATTGGTA	NA	False	NA	-4	True	TTTAAA	-2	NA	10858889	10852706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10855082_10856143_10856258_10857861
WTC11_00014364	chr11	-	1309	1	FSM	ENSG00000254598.3	ENST00000528848.3	1309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTATCTGTCTCCTGATG	NA	False	NA	NA	False	NA	NA	NA	11353250	11351941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11351900_11353200
WTC11_00014365	chr11	-	9549	8	FSM	ENSG00000050165.19	ENST00000396505.7	9549	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	40.3712364771489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCCAGGGAAAATGCTA	-12008062	False	NA	NA	False	ATTAAA	-8	NA	12009082	11956206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12008869
WTC11_00014366	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	10.2048463432278	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-12007606	False	1020	69	True	AATAAA	-26	NA	12008626	11963035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
WTC11_00014367	chr11	-	2636	8	FSM	ENSG00000050165.19	ENST00000326932.8	2636	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	31.2638540718922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	-12008350	True	NA	-1	True	TATAAA	-45	NA	12009370	11963105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009171
WTC11_00014368	chr11	-	903	7	FSM	ENSG00000050165.19	ENST00000533813.5	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	54.7986212316413	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGAGGGCGAGCTTTGCC	-12008191	False	NA	NA	False	NA	NA	NA	12009211	11965934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009038
WTC11_00014369	chr11	-	2572	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	-54	-79	0	79	multi-exon	FALSE	canonical	3	68	junction_8	44.2632395447961	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACTTTTACTATATGT	-13460725	True	NA	68	True	NA	NA	NA	13463276	13387928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
WTC11_00014370	chr11	-	2234	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	117	-689	0	-5	multi-exon	FALSE	canonical	3	89	junction_7	29.7822026021706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATTTATAACCACATTG	-13460629	True	NA	-16	True	AATAAA	-25	NA	13463180	13388012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
WTC11_00014372	chr11	-	2348	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	-5	0	5	multi-exon	FALSE	canonical	3	702	junction_5	129.593827013481	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGATTACTCATTGTGT	-14348519	True	NA	-9	True	ATTAAA	-24	NA	14359183	14277916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
WTC11_00014373	chr11	-	2249	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	-84	-1433	-84	0	multi-exon	FALSE	canonical	3	187	junction_5	321.489906528961	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	-14342165	False	NA	-56	True	NA	NA	NA	14342178	14277963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
WTC11_00014374	chr11	-	888	6	FSM	ENSG00000133818.14	ENST00000532950.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	491.97739785482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCAAAACACATTCTAG	-14348483	True	NA	NA	False	NA	NA	NA	14359147	14281601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14356685_14356770_14358762
WTC11_00014375	chr11	-	3559	22	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	0	78	combination_of_known_junctions	FALSE	canonical	3	46	junction_21	127.302004907679	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGAGAATTTACAAAT	-14492143	True	NA	70	True	TATAAA	-34	NA	14499846	14457427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499602
WTC11_00014376	chr11	-	3461	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	-41	-84	0	78	multi-exon	FALSE	canonical	3	390	junction_21	76.4133347814784	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGAGAATTTACAAAT	-14492149	True	NA	70	True	TATAAA	-34	NA	14499852	14457427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
WTC11_00014377	chr11	-	3585	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	-26	-78	-16	78	multi-exon	FALSE	canonical	3	41	junction_21	128.201478336324	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGAGAATTTACAAAT	-14492175	True	NA	70	True	TATAAA	-34	NA	14499878	14457427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
WTC11_00014378	chr11	-	3301	22	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	124	junction_21	113.640819372549	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCAATGGATTTCTTTT	-14492104	True	NA	-10	True	AATAAA	-21	NA	14499807	14457507	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
WTC11_00014385	chr11	-	646	3	FSM	ENSG00000129084.18	ENST00000524606.1	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_2	102.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTTGTTTTTTTAA	-14511019	False	NA	1	True	AATAAA	-22	NA	14511031	14504873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871
WTC11_00014386	chr11	-	1200	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	-5	0	3	multi-exon	FALSE	canonical	3	1224	junction_9	123.648645986606	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTTTTTTAAGTA	-14505099	True	NA	4	True	AATAAA	-25	NA	14520386	14504870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
WTC11_00014387	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	448.646634300466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	-14505076	True	NA	-38	True	NA	NA	NA	14520363	14504912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
WTC11_00014390	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	28.9568644711405	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-14892008	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
WTC11_00014391	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.2001773044071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891069	True	NA	NA	False	AATAAA	-24	NA	14891640	14878008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
WTC11_00014392	chr11	-	2608	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	22	junction_4	25.2438111227287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891074	True	NA	NA	False	AATAAA	-24	NA	14891645	14878008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
WTC11_00014393	chr11	-	761	5	FSM	ENSG00000110680.13	ENST00000361010.7	916	5	0	155	0	-153	multi-exon	FALSE	canonical	2	2	junction_2	1.78535710713571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAACCTCAGGGGGACA	-14972258	False	NA	NA	False	NA	NA	NA	14972286	14966823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972220
WTC11_00014394	chr11	-	5537	27	FSM	ENSG00000166689.16	ENST00000531066.6	5530	27	0	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_8	10.5055634739563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTGCTGGCTATA	-17013090	True	NA	-6	True	ATTAAA	-20	NA	17014414	16777289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
WTC11_00014395	chr11	-	4980	23	FSM	ENSG00000166689.16	ENST00000355661.7	4980	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	9.94862837840324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTTGCCTAATCCT	-17013088	True	NA	0	True	ATTAAA	-20	NA	17014412	16787483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
WTC11_00014398	chr11	-	423	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	-36	-66	-36	66	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAAATCTCTGTGAGG	NA	False	NA	-1	True	AATAAA	-38	NA	16975049	16974626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_16974600_16975000
WTC11_00014399	chr11	-	595	2	FSM	ENSG00000110700.7	ENST00000531008.5	594	2	0	-1	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	-17075602	False	429	32	True	AATAAA	-20	NA	17075612	17074387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096
WTC11_00014400	chr11	-	747	3	FSM	ENSG00000110700.7	ENST00000531908.5	746	3	0	-1	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	2588	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	-17076010	False	NA	32	True	AATAAA	-20	NA	17076020	17074387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453
WTC11_00014401	chr11	-	492	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	-1	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6218.06489512614	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	-16938685	True	NA	32	True	AATAAA	-20	NA	17077666	17074387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
WTC11_00014402	chr11	-	527	6	FSM	ENSG00000110700.7	ENST00000525634.6	527	6	0	0	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	1989.97591945229	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	-16938686	True	NA	32	True	AATAAA	-20	NA	17077667	17074387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618
WTC11_00014403	chr11	-	562	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	-1	0	0	multi-exon	FALSE	canonical	3	175	junction_5	6576.52207173366	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	-16938725	True	NA	32	True	AATAAA	-20	NA	17077706	17074387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
WTC11_00014404	chr11	-	769	5	FSM	ENSG00000110700.7_ENSG00000011405.14	ENST00000525828.1	664	5	-105	0	-58	0	multi-exon	FALSE	canonical	3	12545	junction_1	2033.15596733256	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	-17077761	False	NA	27	True	AATAAA	-15	NA	17077773	17074392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
WTC11_00014407	chr11	-	8437	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	-10	4368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.388261655078	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTCCATACAATGGA	-17193619	True	NA	NA	False	NA	NA	NA	17207960	17082203	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082226_17086561_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
WTC11_00014408	chr11	-	8241	32	FSM	ENSG00000011405.14	ENST00000265970.11	8227	32	0	-14	0	14	multi-exon	FALSE	canonical	3	218	junction_27	44.8292401232858	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTTGTTGACATACTA	-17169720	False	NA	-22	True	AATAAA	-19	NA	17169741	17086557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676
WTC11_00014410	chr11	-	4015	1	FSM	ENSG00000187486.7	ENST00000339994.5	3412	1	-602	-1	70	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACGGTGCTTTTATTTT	-17388722	True	NA	-2	True	NA	NA	NA	17389261	17385246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17385200_17389300
WTC11_00014411	chr11	-	1557	5	FSM	ENSG00000006071.16	ENST00000684221.1	6261	5	28	4676	-1	2177	multi-exon	FALSE	canonical	0	0	junction_4	2.27760839478607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGGGAGGCTAGGCCC	-17476572	False	NA	NA	False	NA	NA	NA	17476678	17460749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
WTC11_00014412	chr11	-	1194	1	FSM	ENSG00000006611.17	ENST00000624811.1	1194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	NA	False	NA	-4	True	AATAAA	-17	NA	17495093	17493899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17493900_17495100
WTC11_00014414	chr11	-	1433	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	41.0945251828026	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011014	True	NA	-10	True	AATAAA	-20	NA	18012929	17788047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
WTC11_00014415	chr11	-	1268	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	-4	0	3	multi-exon	FALSE	canonical	3	72	junction_2	40.6988336654553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGAATTGTTTTGT	-18011113	True	NA	-7	True	AATAAA	-23	NA	18013028	17788044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
WTC11_00014416	chr11	-	1454	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	-3	0	3	multi-exon	FALSE	canonical	3	86	junction_10	34.0360103419893	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGAATTGTTTTGT	-18011132	True	NA	-7	True	AATAAA	-23	NA	18013047	17788044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
WTC11_00014423	chr11	-	1568	12	FSM	ENSG00000166788.10	ENST00000524803.6	1573	12	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTGTCTGGTGTTAAC	-18100388	True	NA	42	True	ACTAAA	-14	NA	18106082	18080296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18083534_18083732_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
WTC11_00014424	chr11	-	1519	12	FSM	ENSG00000166788.10	ENST00000300013.8	1518	12	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAATTGACTTATTGGA	-18100388	True	NA	-4	True	AATAAA	-21	NA	18106082	18080342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
WTC11_00014425	chr11	-	949	8	FSM	ENSG00000166788.10	ENST00000531751.5	949	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	194.324365903181	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-18092306	False	18	-6	True	AATAAA	-19	NA	18092324	18080344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244
WTC11_00014427	chr11	-	770	3	FSM	ENSG00000166788.10	ENST00000531216.1	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	302.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAAGACTTTTTTACT	-18087188	False	NA	NA	False	TATAAA	-17	NA	18087206	18083214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18083732_18086865_18087055_18087142
WTC11_00014429	chr11	-	543	4	FSM	ENSG00000166788.10	ENST00000530736.1	543	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	279.648986330284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCATCTTGATAACTGA	-18100391	True	NA	NA	False	NA	NA	NA	18106085	18093799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18093966_18096770_18096855_18103232_18103347_18105906
WTC11_00014430	chr11	-	4968	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	-58	-70	0	62	multi-exon	TRUE	canonical	3	18	junction_22	21.0403488799909	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTCCTAGATATGATGC	-18320546	True	NA	72	True	NA	NA	NA	18322198	18278605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
WTC11_00014431	chr11	-	5112	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	-325	-62	-301	62	multi-exon	FALSE	canonical	3	20	junction_21	18.1299166449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTCCTAGATATGATGC	-18322374	True	NA	72	True	NA	NA	NA	18322499	18278605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
WTC11_00014437	chr11	-	1535	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	-1	0	1	multi-exon	FALSE	canonical	3	633	junction_6	31.5211079582171	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCCTTTATTGGAC	-18515566	True	NA	-14	True	AATAAA	-15	NA	18526942	18480309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
WTC11_00014438	chr11	-	531	4	FSM	ENSG00000074319.13	ENST00000544804.5	391	4	0	-140	0	140	multi-exon	FALSE	canonical	1	1	junction_3	324.619777586024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTAAATGACTTAACAT	-18515505	True	NA	NA	False	NA	NA	NA	18526881	18502344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18502578_18506856_18506924_18509541_18509666_18526774
WTC11_00014442	chr11	-	4202	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	5	0	-5	multi-exon	FALSE	canonical	3	24	junction_2	12.6810850227956	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCAGGAGATGCTTCA	-18587701	True	NA	-6	True	AATAAA	-11	NA	18588734	18529613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
WTC11_00014444	chr11	-	1296	1	FSM	ENSG00000256282.2	ENST00000540985.1	943	1	-99	-254	-99	84	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCCCCATACCTCCCAG	NA	False	NA	NA	False	GGGGCT	-16	NA	18596670	18595374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18595400_18596700
WTC11_00014445	chr11	-	5603	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	-2	0	2	multi-exon	FALSE	canonical	3	70	junction_5	9.17387595294377	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTGGTTTGCATTTA	-18632507	True	NA	-5	True	ATTAAA	-16	NA	18634342	18606400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
WTC11_00014447	chr11	-	2162	3	FSM	ENSG00000110786.18	ENST00000396166.7	2299	3	131	6	131	-4	multi-exon	FALSE	canonical	3	49	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAACCTCCTGGGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	18730613	18727935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657
WTC11_00014448	chr11	-	2800	14	FSM	ENSG00000110786.18	ENST00000396168.1	2796	14	0	-4	0	0	multi-exon	FALSE	canonical	3	9	junction_13	10.6914775549356	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-18791624	False	NA	-1	True	AATAAA	-24	NA	18791640	18727927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18791524
WTC11_00014449	chr11	-	3091	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	6.14327241121272	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-18791348	True	NA	-1	True	AATAAA	-24	NA	18791798	18727927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
WTC11_00014450	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.1664215665072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240128	False	817	NA	False	ATTAAA	-17	NA	19240945	19224062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
WTC11_00014451	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	13.6775871003949	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240803	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
WTC11_00014452	chr11	-	3552	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	-32	-1	-32	1	multi-exon	FALSE	canonical	2	8	junction_12	18.0662361572323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAGCATTTTCATTTCG	-19240835	True	NA	NA	False	ATTAAA	-15	NA	19241652	19224064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
WTC11_00014453	chr11	-	1931	1	FSM	ENSG00000270607.1	ENST00000603468.1	1686	1	-609	364	-609	-364	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCATCCTGTTTATGG	-19713217	False	NA	NA	False	AATAAA	-11	NA	19713228	19711297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19711300_19713200
WTC11_00014454	chr11	-	3291	1	FSM	ENSG00000183161.6	ENST00000327470.6	3291	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACTATAAAAATAGAATAT	-22623876	True	NA	NA	False	AAAAAG	-9	NA	22625823	22622532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_22622500_22625800
WTC11_00014455	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	21.4527905462721	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	-22827976	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
WTC11_00014456	chr11	-	917	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	-56	-116	-45	85	multi-exon	FALSE	canonical	3	20	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGAGTGTCTGGCATAT	-27219972	True	NA	NA	False	ATTAAA	-20	NA	27220158	27217035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27217481_27219686
WTC11_00014457	chr11	-	5270	19	NNC	ENSG00000205213.14	novel	5250	18	NA	NA	0	79632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.3292940928238	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACAATAAAAAGAATAAGAA	-27466669	True	NA	NA	False	AAAAAG	-10	NA	27472775	27286328	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27286365_27365961_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
WTC11_00014458	chr11	-	716	6	FSM	ENSG00000109881.17	ENST00000529615.1	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	108.939249125373	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCAAAGGGACTTTC	-27350405	False	NA	NA	False	NA	NA	NA	27350424	27330826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27330856_27338097_27338236_27338880_27339036_27340695_27340838_27341391_27341551_27350331
WTC11_00014459	chr11	-	1460	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	-8	0	8	multi-exon	FALSE	canonical	3	203	junction_3	28.7012194862866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACTAGTTTACATT	-27359059	True	NA	-7	True	AATAAA	-28	NA	27363215	27338503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
WTC11_00014461	chr11	-	5263	19	NNC	ENSG00000205213.14	novel	5250	18	NA	NA	0	9952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.3292940928238	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGGGAACAAAAGCTTCA	-27466669	True	NA	NA	False	NA	NA	NA	27472775	27356008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27356038_27365961_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
WTC11_00014463	chr11	-	7130	17	FSM	ENSG00000205213.14	ENST00000389858.4	5163	17	0	-1967	0	1967	multi-exon	FALSE	canonical	2	11	junction_16	66.6628644749084	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCTTTCCTTTACTGC	-27466669	True	NA	NA	False	AATAAA	-3	NA	27472775	27363993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27472117
WTC11_00014464	chr11	-	7217	18	FSM	ENSG00000205213.14	ENST00000379214.9	5250	18	0	-1967	0	1967	multi-exon	FALSE	canonical	3	230	junction_17	26.3328442277151	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCTTTCCTTTACTGC	-27466684	True	NA	NA	False	AATAAA	-3	NA	27472790	27363993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
WTC11_00014466	chr11	-	5113	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	-271	0	271	multi-exon	FALSE	canonical	3	624	junction_1	26.688012290165	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTTATGAGCTAAAGGAA	-27490310	True	NA	NA	False	AGTAAA	-42	NA	27506769	27494146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
WTC11_00014467	chr11	-	780	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	344	junction_1	840	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587645	True	NA	-30	True	AATAAA	-16	NA	27634521	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618019_27623949_27624146_27634330
WTC11_00014468	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_1	691	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587646	True	NA	-30	True	AATAAA	-16	NA	27634522	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27618024_27623949_27624146_27634330
WTC11_00014469	chr11	-	5588	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	0	4612	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_1	844.833842966901	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAATCTCACTATGTT	-27634453	False	NA	NA	False	NA	NA	NA	27634627	27613013	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618038_27618111_27618183_27623949_27624146_27634330
WTC11_00014470	chr11	-	616	2	NNC	ENSG00000254934.5	novel	786	3	NA	NA	2	-11114	at_least_one_novel_splicesite	FALSE	canonical	3	672	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-27587644	True	NA	2	True	ATTAAA	-22	NA	27634520	27629106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27629533_27634330
WTC11_00014471	chr11	-	3980	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	5	0	5	0	multi-exon	FALSE	canonical	3	27	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-27699215	True	NA	NA	False	CATAAA	-2	NA	27700450	27654892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27658586_27700163
WTC11_00014472	chr11	-	2897	1	FSM	ENSG00000224411.3	ENST00000530115.1	2196	1	-31	-670	-31	670	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAATACAAATT	-27890991	True	NA	NA	False	AATACA	-18	NA	27891064	27888167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27888200_27891100
WTC11_00014473	chr11	-	3420	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	-3	0	3	multi-exon	FALSE	canonical	3	136	junction_8	24.5531948023063	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTGTCTCATTACT	-28105164	True	NA	-1	True	ATTAAA	-22	NA	28108156	28020615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
WTC11_00014475	chr11	-	731	2	FSM	ENSG00000121621.7	ENST00000526288.1	744	2	0	13	0	-13	multi-exon	FALSE	canonical	3	175	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGCAATTAACATCAGT	-28105153	True	NA	NA	False	ATTAAA	-9	NA	28108145	28097344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_28097994_28108063
WTC11_00014476	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.81881307912987	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	-30586209	True	NA	1	True	AATAAA	-18	NA	30586353	30410223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
WTC11_00014477	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	88.6191852817436	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506845	True	NA	-5	True	AATAAA	-15	NA	31509622	31432400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
WTC11_00014478	chr11	-	473	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	-4	0	4	multi-exon	FALSE	canonical	3	29	junction_2	124.212184050787	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTTTTAATTGTTAA	-31506797	True	NA	-1	True	AATAAA	-19	NA	31509574	31432396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
WTC11_00014479	chr11	-	478	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	131.945274851188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506813	True	NA	-5	True	AATAAA	-15	NA	31509590	31432400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
WTC11_00014482	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	-31506786	True	NA	NA	False	NA	NA	NA	31509563	31452197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31453093_31456259_31456387_31509518
WTC11_00014487	chr11	-	680	1	FSM	ENSG00000213713.3	ENST00000527583.1	895	1	259	-44	259	44	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGACAGGCCGGGT	NA	False	NA	NA	False	NA	NA	NA	33076201	33075521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33075500_33076200
WTC11_00014488	chr11	-	2819	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	-7	0	7	multi-exon	FALSE	canonical	3	173	junction_15	100.97999801941	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCTTCTTTCAGATT	-33151142	True	NA	2	True	AATAAA	-22	NA	33161480	33084576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
WTC11_00014489	chr11	-	2922	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	-11	0	0	multi-exon	FALSE	canonical	3	24	junction_21	93.3739464601932	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151156	True	NA	-5	True	AATAAA	-15	NA	33161494	33084583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
WTC11_00014490	chr11	-	2812	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	51	-1731	0	1731	multi-exon	FALSE	canonical	3	532	junction_2	4	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAGTAACGGAAGATA	-33151142	True	NA	NA	False	AATACA	-4	NA	33161480	33139234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33141763_33141884_33141987_33161298
WTC11_00014491	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-33151153	True	NA	17	True	NA	NA	NA	33161491	33141464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33141987_33161298
WTC11_00014492	chr11	-	7585	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	-22	0	22	multi-exon	FALSE	canonical	3	271	junction_3	58.0746645850552	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCTAATGTTGAACACAA	-33731391	True	NA	NA	False	NA	NA	NA	33736423	33702987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
WTC11_00014493	chr11	-	655	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	23	0	23	0	multi-exon	FALSE	canonical	3	38	junction_4	175.074269954211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	-33731424	True	NA	-26	True	AATAAA	-15	NA	33736456	33709995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
WTC11_00014494	chr11	-	5732	10	FSM	ENSG00000110429.14	ENST00000526785.5	5798	10	60	6	27	-1	multi-exon	FALSE	canonical	3	121	junction_1	31.8642955882181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTGTATAATT	-33772337	False	NA	-7	True	TTTAAA	-18	NA	33774287	33740944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740
WTC11_00014495	chr11	-	2474	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	1	-72	-1	67	multi-exon	TRUE	canonical	3	121	junction_1	30.4197304393053	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGATTCTTGCTGACC	-33772569	True	NA	66	True	CATAAA	-38	NA	33774519	33740871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
WTC11_00014496	chr11	-	350	3	FSM	ENSG00000110429.14	ENST00000527772.1	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTGTTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	33748812	33745936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33746060_33747129_33747321_33748776
WTC11_00014497	chr11	-	1655	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	17	0	-1	0	multi-exon	FALSE	canonical	3	190	junction_4	13.1749856513615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	-33772576	True	NA	NA	False	AATAAA	-33	NA	33774526	33746742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
WTC11_00014498	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	5.10170008428563	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-34357484	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
WTC11_00014499	chr11	-	886	1	FSM	ENSG00000254708.1	ENST00000531489.1	886	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCGGAAATGTCCATTCA	NA	False	NA	NA	False	AAGAAA	-12	NA	34336003	34335117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34335100_34336000
WTC11_00014500	chr11	-	1248	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	-2	0	2	multi-exon	FALSE	canonical	3	279	junction_5	13.6381816969859	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTCAATGTTAATGTC	-34911686	True	NA	-2	True	AATAAA	-23	NA	34916379	34882292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
WTC11_00014501	chr11	-	2725	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	-2	0	-2	multi-exon	FALSE	canonical	2	8	junction_3	2.76405499221705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCTATGCTCTTATTT	-35525492	True	NA	NA	False	AATAAA	-30	NA	35525616	35431824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
WTC11_00014502	chr11	-	2783	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_5	4.18774283864764	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCTATGCTCTTATTT	-35525499	True	NA	NA	False	AATAAA	-30	NA	35525623	35431824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
WTC11_00014503	chr11	-	2945	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	4	0	-4	multi-exon	FALSE	canonical	3	269	junction_3	20.6842935581566	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCTCGTGATCATTTAA	-36286478	True	NA	NA	False	AATAAA	-13	NA	36289424	36272295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
WTC11_00014504	chr11	-	909	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	8	0	8	0	multi-exon	FALSE	canonical	2	5	junction_4	124.407345040395	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAGGGAATCGGACA	-36286495	True	NA	NA	False	NA	NA	NA	36289441	36274222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
WTC11_00014505	chr11	-	881	5	FSM	ENSG00000110442.12	ENST00000532705.1	881	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	127.762230334321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAGCTGTTTGAGAAAT	-36286478	True	NA	NA	False	NA	NA	NA	36289424	36274324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136_36276241_36278476_36278617_36280711_36280838_36289361
WTC11_00014506	chr11	-	988	4	FSM	ENSG00000110442.12	ENST00000528608.5	988	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	9.42809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACGCTGCCACTGTGAA	-36286480	True	NA	NA	False	NA	NA	NA	36289426	36276466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36277124_36278476_36278617_36280711_36280838_36289361
WTC11_00014507	chr11	-	7891	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	-6	0	6	multi-exon	FALSE	canonical	1	16	junction_3	14.1037819986934	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAAGTGGTTTTTGTTA	-36509301	True	NA	-8	True	ATTAAA	-27	NA	36510272	36483762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
WTC11_00014508	chr11	-	3317	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	250	0	-14	0	multi-exon	FALSE	canonical	3	45	junction_6	56.7707377675037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	-44951001	True	NA	-1	True	AAGAAA	-30	NA	44951056	44932347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
WTC11_00014509	chr11	-	3433	8	FSM	ENSG00000175274.19	ENST00000308212.9	3683	8	250	0	-14	0	multi-exon	FALSE	canonical	3	16	junction_7	75.0406692455253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	-44951001	True	NA	-1	True	AAGAAA	-30	NA	44951056	44932347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950876
WTC11_00014511	chr11	-	658	8	FSM	ENSG00000175274.19	ENST00000528473.5	658	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	83.6103694379532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGATCCTGCTGCTCCT	-44950697	False	NA	NA	False	NA	NA	NA	44950752	44934979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939113_44939191_44950676
WTC11_00014515	chr11	-	5151	6	FSM	ENSG00000019505.8	ENST00000020926.8	5165	6	14	0	14	0	multi-exon	FALSE	canonical	3	24	junction_5	3.84707681233427	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGCCTGGTGTTTTCT	-45284761	True	NA	-6	True	AATAAA	-16	NA	45286327	45240301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45244357_45246382_45246513_45252420_45252723_45254269_45254405_45255665_45255892_45286024
WTC11_00014516	chr11	-	3823	4	FSM	ENSG00000175264.8	ENST00000308064.7	3906	4	7	76	7	-76	multi-exon	FALSE	canonical	3	13	junction_3	2.16024689946929	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATGTAAAATTTACCA	-45665489	True	NA	NA	False	NA	NA	NA	45665615	45647764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45650966_45651992_45652091_45652520_45652607_45665177
WTC11_00014517	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	14.7	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	-45916546	True	NA	-2	True	AGTAAA	-23	NA	45917877	45909662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
WTC11_00014518	chr11	-	1036	11	NIC	ENSG00000121680.16	novel	1668	11	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	1	5	junction_10	58.5649212413028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGTGCGGCCTCTCCGT	-45916499	True	NA	-4	True	AATAAA	-19	NA	45917830	45910173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917773
WTC11_00014519	chr11	-	1280	12	NIC	ENSG00000121680.16	novel	1668	11	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	69.1806833021239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGCGGCCTCTCCGTGC	-45916499	True	NA	-2	True	AATAAA	-21	NA	45917830	45910171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45916973_45917142_45917457_45917494_45917699
WTC11_00014522	chr11	-	7451	19	FSM	ENSG00000135365.17	ENST00000676320.1	7451	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	13.3800108878141	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGGTGTTGGGTTTG	-46119992	True	NA	NA	False	AATAAA	-19	NA	46121454	45929318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46090454_46090567_46092182_46092224_46120934
WTC11_00014523	chr11	-	4092	18	NIC	ENSG00000135365.17	novel	7451	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	10.4318516770401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCCGTGTAGTTAT	-46119992	True	NA	-2	True	ATTAAA	-17	NA	46121454	45932565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
WTC11_00014526	chr11	-	451	4	FSM	ENSG00000135365.17	ENST00000532028.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	28.8559641437722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAGACTAAATAACAG	NA	False	NA	NA	False	NA	NA	NA	45945869	45933984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45945839
WTC11_00014527	chr11	-	3963	10	FSM	ENSG00000135365.17	ENST00000527401.5	8954	10	2	4989	2	-179	multi-exon	FALSE	canonical	3	36	junction_3	12.9109007441267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGAAGGCGCTCTGCTC	-45971353	False	NA	NA	False	GGGGCT	-35	NA	45971367	45934311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814
WTC11_00014530	chr11	-	2133	1	FSM	ENSG00000180720.8	ENST00000433765.3	1511	1	29	-651	29	651	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGAGTGGTCCACGTATT	-46386529	False	NA	NA	False	NA	NA	NA	46386579	46384446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46384400_46386600
WTC11_00014531	chr11	-	4977	19	NIC	ENSG00000110497.15	novel	5023	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	18.0968757961215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46589997	True	NA	-3	True	ATTAAA	-18	NA	46594021	46396413	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
WTC11_00014532	chr11	-	5111	17	FSM	ENSG00000110497.15	ENST00000534300.5	5067	17	-44	0	-20	0	multi-exon	FALSE	canonical	2	5	junction_9	21.1094617411245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46590041	True	NA	-3	True	ATTAAA	-18	NA	46594065	46396413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
WTC11_00014533	chr11	-	5251	18	FSM	ENSG00000110497.15	ENST00000683756.1	5249	18	0	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_10	18.1853205182901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCTCTCTCTTATTT	-46589999	True	NA	-1	True	ATTAAA	-20	NA	46594023	46396411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
WTC11_00014534	chr11	-	4957	18	FSM	ENSG00000110497.15	ENST00000533727.5	4817	18	-140	0	37	0	multi-exon	TRUE	canonical	3	29	junction_10	15.4505573745218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46590064	False	NA	-3	True	ATTAAA	-18	NA	46594088	46396413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
WTC11_00014537	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	-46429127	True	NA	-60	True	NA	NA	NA	46429150	46428652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46428700_46429200
WTC11_00014538	chr11	-	3796	3	NIC	ENSG00000180423.4	novel	1967	3	NA	NA	0	1586	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTATTATCTGCTGTTT	-46616813	False	NA	-9	True	AATAAA	-37	NA	46616849	46601274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46603910_46615567_46616382_46616502
WTC11_00014539	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-46616812	True	NA	NA	False	NA	NA	NA	46617227	46602860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46603910_46615567_46616382_46617123
WTC11_00014540	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	20.1225412576709	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-46693144	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
WTC11_00014546	chr11	-	7451	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	-15	-264	1	264	multi-exon	TRUE	canonical	3	824	junction_28	82.2100226934657	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTATAGTGGGAACA	-46836472	True	NA	NA	False	ATTAAA	-7	NA	46846295	46742783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
WTC11_00014547	chr11	-	7271	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	13	-752	1	264	multi-exon	FALSE	canonical	3	9	junction_8	167.848012247448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTATAGTGGGAACA	-46836472	True	NA	NA	False	ATTAAA	-7	NA	46846295	46742783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
WTC11_00014548	chr11	-	8155	38	FSM	ENSG00000134569.10	ENST00000378623.6	8155	38	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_22	17.8406631669119	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAGCTCATCTGGAGA	-46916978	True	NA	NA	False	AATAAA	-22	NA	46918550	46856716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886534_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46902782_46902930_46918327
WTC11_00014549	chr11	-	3450	2	FSM	ENSG00000134569.10	ENST00000529604.1	2774	2	-676	0	-676	0	multi-exon	FALSE	canonical	3	138	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGCCTGGCTTGGAG	-46863596	False	NA	-7	True	TATAAA	-16	NA	46863609	46856869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46859316_46862605
WTC11_00014553	chr11	-	2788	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	-15	0	13	multi-exon	FALSE	canonical	3	331	junction_10	38.8286263241725	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCCCTGCCCAGTG	-47169047	True	NA	11	True	NA	NA	NA	47176879	47164285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
WTC11_00014554	chr11	-	2950	15	FSM	ENSG00000149182.15	ENST00000426335.6	2937	15	0	-13	0	13	multi-exon	FALSE	canonical	2	16	junction_11	106.388607069957	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCCCTGCCCAGTG	-47177066	False	NA	11	True	NA	NA	NA	47177125	47164285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175181_47175314_47175850_47175924_47176515_47176635_47176781
WTC11_00014555	chr11	-	1558	10	FSM	ENSG00000149182.15	ENST00000533243.5	1558	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	133.34064794751	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATTCCCTCTCACA	-47177066	False	NA	NA	False	NA	NA	NA	47177125	47165280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47176515_47176635_47176781
WTC11_00014558	chr11	-	1000	10	FSM	ENSG00000149182.15	ENST00000525398.5	1000	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	124.635567521306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTCAGCTCCGGGTG	-47169038	True	NA	64	True	NA	NA	NA	47176870	47171425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173883_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
WTC11_00014564	chr11	-	1961	12	NNC	ENSG00000165912.16	novel	1873	11	NA	NA	0	3233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.906635242817	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTGCTGAAGTTAGACT	-47182279	True	NA	NA	False	NA	NA	NA	47186409	47174288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47174406_47177521_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183066_47186348
WTC11_00014569	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_3	56.5707521604583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47182304	True	NA	-10	True	ATTAAA	-38	NA	47186434	47177521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
WTC11_00014570	chr11	-	443	3	FSM	ENSG00000165912.16	ENST00000533686.5	443	3	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_1	144.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCCTGGGACCCAGGG	-47179166	False	NA	NA	False	NA	NA	NA	47179225	47177807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47178047_47178893_47179031_47179158
WTC11_00014573	chr11	-	702	5	FSM	ENSG00000165912.16	ENST00000525725.5	683	5	0	-19	0	0	multi-exon	FALSE	canonical	3	11	junction_4	176.483002014358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCTGGGTGGGGGA	-47185360	False	4130	NA	False	NA	NA	NA	47185419	47180456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47185265
WTC11_00014576	chr11	-	362	1	FSM	ENSG00000243802.2	ENST00000473109.2	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATTTTAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	47191542	47191180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47191200_47191500
WTC11_00014577	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_5	11.5585466214399	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	-47247131	False	NA	-4	True	AATGAA	-24	NA	47248906	47239304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
WTC11_00014578	chr11	-	1372	13	NNC	ENSG00000165916.9	novel	1540	12	NA	NA	0	99979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	579.023579446948	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAAACTGCTGTCCAGT	-47404918	True	NA	NA	False	NA	NA	NA	47426235	47318789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47318826_47418774_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
WTC11_00014579	chr11	-	1574	13	NNC	ENSG00000165916.9	novel	1540	12	NA	NA	0	99979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	579.023579446948	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAAACTGCTGTCCAGT	-47421964	True	NA	NA	False	NA	NA	NA	47426439	47318789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47318824_47418774_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
WTC11_00014580	chr11	-	1389	13	NNC	ENSG00000165916.9	novel	1373	12	NA	NA	0	51020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	579.023579446948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACCATCATCTATTTCC	-47404941	True	NA	NA	False	NA	NA	NA	47426258	47367748	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47367778_47418773_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
WTC11_00014582	chr11	-	1580	12	FSM	ENSG00000165916.9	ENST00000619920.4	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	1881	junction_11	122.136896503896	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTCTGCCTTCCCT	-47421998	False	NA	-2	True	AATAAA	-22	NA	47426473	47418768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
WTC11_00014590	chr11	-	3146	3	NNC	ENSG00000149187.19	novel	2108	13	NA	NA	0	37106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCCAAGGGCTTATACT	-47472333	False	NA	NA	False	NA	NA	NA	47472356	47428826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47428853_47465937_47468892_47472190
WTC11_00014591	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	107.541762907397	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47534988	True	NA	1	True	ATTAAA	-19	NA	47553117	47465932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00014592	chr11	-	7666	13	FSM	ENSG00000149187.19	ENST00000395290.6	7666	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	141.941595970549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAACTGATGTCTTCAG	NA	False	NA	-10	True	ATTAAA	-8	NA	47489024	47465943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484521_47486749_47486799_47487158_47487242_47488836
WTC11_00014599	chr11	-	7817	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	108.120577003629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47535011	True	NA	1	True	ATTAAA	-19	NA	47553140	47465932	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00014602	chr11	-	1805	2	FSM	ENSG00000149187.19	ENST00000532146.1	473	2	0	-1332	0	1332	multi-exon	FALSE	canonical	3	472	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAGAAGAAAAAA	-47483419	False	NA	NA	False	AATAGA	-36	NA	47483510	47481109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47482857_47483452
WTC11_00014603	chr11	-	3080	3	FSM	ENSG00000123444.14	ENST00000533290.5	3079	3	0	-1	0	0	multi-exon	FALSE	canonical	3	122	junction_1	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576384	False	NA	-1	True	AATAAA	-15	NA	47578789	47572196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410
WTC11_00014604	chr11	-	2444	4	FSM	ENSG00000123444.14	ENST00000526005.5	2444	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	58.0746645850552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576551	True	NA	-1	True	AATAAA	-15	NA	47578956	47572196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410_47578025_47578827
WTC11_00014605	chr11	-	2461	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	-1	0	0	multi-exon	FALSE	canonical	3	23	junction_3	48.6643835080875	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576564	True	NA	-1	True	AATAAA	-15	NA	47578969	47572196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
WTC11_00014606	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	18.6726180988812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576565	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
WTC11_00014609	chr11	-	2533	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	-11	0	9	multi-exon	FALSE	canonical	3	1078	junction_10	92.9043713838171	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCTTCTGTGAACT	-47627796	True	NA	0	True	AGTAAA	-29	NA	47642559	47617305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
WTC11_00014610	chr11	-	2452	12	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	40	-3	combination_of_known_junctions	TRUE	canonical	3	172	junction_9	330.905444535354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCATGTTTATCCTGT	-47627756	True	NA	-14	True	AGTAAA	-15	NA	47642519	47617319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47638698_47638806_47638966_47639052_47642378
WTC11_00014612	chr11	-	4026	17	FSM	ENSG00000109920.13	ENST00000263773.10	4035	17	0	9	0	-9	multi-exon	FALSE	canonical	0	0	junction_16	49.6122464720154	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTCAACTCCTGTTATT	-47761666	True	NA	-7	True	AATAAA	-34	NA	47767341	47716502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
WTC11_00014613	chr11	-	8051	6	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	-270	-19	intron_retention	FALSE	canonical	3	38	junction_5	64.7808613712414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTTTTGCTCGTCAAC	-47731816	False	NA	-17	True	AATAAA	-24	NA	47731832	47716512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47725736
WTC11_00014614	chr11	-	4008	17	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	10	-23	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	42.4507067078983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-47761656	True	NA	-21	True	AATAAA	-20	NA	47767331	47716516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
WTC11_00014624	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_21	68.4730484741766	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	-47848422	False	NA	-3	True	NA	NA	NA	47848467	47778086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
WTC11_00014625	chr11	-	5255	36	NNC	ENSG00000030066.13	novel	5376	36	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	128.04360226748	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATACTGAGGTGTGTGT	-47839399	True	NA	-6	True	NA	NA	NA	47848334	47778089	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812866_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
WTC11_00014630	chr11	-	1538	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	-1	0	1	multi-exon	FALSE	canonical	3	632	junction_1	77	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTCTTGCCTGGAT	-47848510	False	NA	-2	True	ATTAAA	-41	NA	47848555	47839499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47840589_47847847_47847960_47848218
WTC11_00014631	chr11	-	1102	1	FSM	ENSG00000226268.3	ENST00000526165.1	959	1	-68	-75	-68	75	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCTTAGGGCTTAGG	NA	False	NA	NA	False	AATAAA	-37	NA	49434506	49433404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_49433400_49434500
WTC11_00014632	chr11	-	3790	1	FSM	ENSG00000134817.12	ENST00000606794.2	3660	1	-184	54	-184	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGATCCTGTTAGT	NA	False	NA	-65	True	NA	NA	NA	57237434	57233644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57233600_57237400
WTC11_00014633	chr11	-	715	2	FSM	ENSG00000149115.14	ENST00000532273.5	592	2	-73	-50	-73	46	multi-exon	FALSE	canonical	3	510	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGCTGTGGTTGGAAAA	-57300721	False	NA	-16	True	NA	NA	NA	57300752	57299591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527
WTC11_00014634	chr11	-	3423	6	FSM	ENSG00000149115.14	ENST00000427750.2	1946	6	-1393	-84	-1393	46	multi-exon	FALSE	canonical	3	396	junction_3	44.3152344008243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGCTGTGGTTGGAAAA	-57304862	False	NA	-16	True	NA	NA	NA	57304872	57299591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458
WTC11_00014635	chr11	-	5820	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_11	102.06334121434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-57317119	True	NA	-22	True	AATAAA	-17	NA	57324952	57299641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
WTC11_00014636	chr11	-	6308	11	FSM	ENSG00000149136.9	ENST00000293880.9	6296	11	0	-12	0	12	multi-exon	FALSE	canonical	3	893	junction_7	109.241979110597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTAGCCTTGGTGT	-57312380	True	NA	-9	True	AATAAA	-33	NA	57335851	57325973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57326479_57326702_57327515_57327711_57327883_57328296_57330139_57330290_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57333541_57334462_57334649_57335067
WTC11_00014637	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_10	110.060335015618	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-57312421	True	NA	-23	True	AATAAA	-19	NA	57335892	57325987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
WTC11_00014638	chr11	-	1796	1	FSM	ENSG00000134802.18	ENST00000625097.1	1796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57408739	False	NA	0	True	AATAAA	-20	NA	57408749	57406953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407000_57408700
WTC11_00014639	chr11	-	2559	13	FSM	ENSG00000134802.18	ENST00000529554.5	2207	13	100	-452	0	0	multi-exon	FALSE	canonical	3	131	junction_12	21.1692911758729	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424122	False	NA	0	True	AATAAA	-20	NA	57426652	57406953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587
WTC11_00014641	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_12	23.2361175707844	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424591	True	NA	0	True	AATAAA	-20	NA	57427121	57406953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
WTC11_00014642	chr11	-	862	5	FSM	ENSG00000134802.18	ENST00000525205.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	77.4741892503561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCAGACCCTTGACTC	NA	False	NA	NA	False	AAAACA	-22	NA	57416653	57407530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407897_57409174_57409299_57414614_57414732_57414932_57415107_57416572
WTC11_00014653	chr11	-	2360	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	-2	0	0	multi-exon	FALSE	canonical	2	8	junction_14	30.6707332411702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57514436	False	NA	-5	True	AATAAA	-16	NA	57514885	57484533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
WTC11_00014654	chr11	-	3044	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	-78	-452	0	452	multi-exon	FALSE	canonical	3	61	junction_10	19.9377858881684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACGTGAAGCTTTAAAA	NA	False	NA	NA	False	AATAAA	-3	NA	57515780	57484081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
WTC11_00014658	chr11	-	1238	5	NNC	ENSG00000156587.16	novel	1219	4	NA	NA	0	48358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.426264496448	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAGAGAAATGACAGTG	-57564461	True	NA	NA	False	NA	NA	NA	57567672	57503297	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_57503318_57551662_57552510_57554436_57554624_57560336_57560433_57567584
WTC11_00014659	chr11	-	669	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	-1	0	1	multi-exon	FALSE	canonical	3	880	junction_2	84.5	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCAAAGCAGTGTGCT	-57522259	True	NA	-7	True	TATAAA	-20	NA	57530754	57528462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57528919_57530118_57530235_57530657
WTC11_00014661	chr11	-	1727	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	-154	0	154	multi-exon	FALSE	canonical	3	62	junction_3	201.490005266321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGCTTTCAGAAGGTC	-57568023	True	NA	NA	False	NA	NA	NA	57568284	57551501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
WTC11_00014662	chr11	-	1111	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-16	4	-10	0	multi-exon	FALSE	canonical	3	455	junction_2	23.6259920426635	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	-57708989	True	NA	-5	True	TTTAAA	-25	NA	57712231	57703713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
WTC11_00014663	chr11	-	1088	3	FSM	ENSG00000156603.20	ENST00000528205.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_2	24	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCTCAAGTTGGAC	-57708965	True	NA	NA	False	NA	NA	NA	57712207	57704229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57704816_57704972_57705230_57711962
WTC11_00014666	chr11	-	2662	3	FSM	ENSG00000245571.7	ENST00000532845.2	2659	3	0	-3	0	3	multi-exon	FALSE	canonical	1	1	junction_2	17	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATTTTGCCAATAAAAG	-59142502	False	NA	NA	False	ATTAAA	-25	NA	59142801	59134017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59136282_59139956_59140168_59142614
WTC11_00014667	chr11	-	4715	14	FSM	ENSG00000110048.12	ENST00000263847.6	4713	14	0	-2	0	2	multi-exon	TRUE	canonical	3	353	junction_3	45.8364729066353	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTCTGATTCACTTC	-59611052	True	NA	1	True	ATTAAA	-20	NA	59615774	59574395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59576720_59576804_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59593603_59593725_59594009_59594256_59600495_59600628_59600818_59600874_59601282_59601386_59601639_59601839_59608483_59608735_59610380_59610590_59615302
WTC11_00014668	chr11	-	832	2	FSM	ENSG00000110048.12	ENST00000528903.1	873	2	0	41	0	-41	multi-exon	FALSE	canonical	3	383	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGACAGGAGGTCTGA	-59600552	False	NA	NA	False	AATGAA	-41	NA	59600592	59593520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59594256_59600495
WTC11_00014670	chr11	-	696	3	Genic_Genomic	ENSG00000234964.4	novel	405	1	NA	NA	-29	104371	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTATTTTAAAATACT	NA	False	NA	NA	False	NA	NA	NA	59781751	59676946	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_59676970_59712523_59712548_59781102
WTC11_00014671	chr11	-	666	1	FSM	ENSG00000234964.4	ENST00000524732.2	405	1	-29	-232	-29	232	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAAATGTTGATGAAA	NA	False	NA	NA	False	AATAAA	-38	NA	59781751	59781085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59781100_59781800
WTC11_00014673	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	597.618235628361	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	-59809925	False	NA	-20	True	NA	NA	NA	59810300	59806534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
WTC11_00014674	chr11	-	922	3	FSM	ENSG00000166902.5	ENST00000525470.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTCAGAACCTCCTG	-59809647	False	NA	NA	False	NA	NA	NA	59810022	59807235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59807850_59808732_59808873_59809854
WTC11_00014676	chr11	-	2340	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	-3	0	3	multi-exon	FALSE	canonical	3	44	junction_12	13.2222035480727	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTCCCTGCGGTTCTT	-60892475	True	NA	42	True	AATAAA	-23	NA	60906585	60890543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
WTC11_00014678	chr11	-	2373	8	FSM	ENSG00000110446.12	ENST00000227880.8	2506	8	133	0	37	0	multi-exon	FALSE	canonical	3	39	junction_3	10.0954627108884	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-60951997	False	NA	-1	True	CATAAA	-27	NA	60952043	60937083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993
WTC11_00014680	chr11	-	2931	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	-260	2	-71	-2	multi-exon	FALSE	canonical	3	143	junction_4	20.3100960115899	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGTGTGGTGTTGCTG	-61161620	False	NA	-7	True	AATAAA	-14	NA	61161686	61130258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
WTC11_00014681	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	74.6705263139346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	-61161070	False	1100	NA	False	NA	NA	NA	61161136	61132443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
WTC11_00014682	chr11	-	915	4	FSM	ENSG00000167987.11	ENST00000536000.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	22.9830855679176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACAGTCCTCGCCTTCA	-61161387	False	NA	NA	False	NA	NA	NA	61161453	61132756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61133338_61134035_61134208_61138736_61138836_61161390
WTC11_00014683	chr11	-	830	2	FSM	ENSG00000167987.11	ENST00000535818.1	865	2	0	35	0	-35	multi-exon	FALSE	canonical	3	143	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGGACATTCCCTG	-61161549	False	NA	NA	False	AAGAAA	-30	NA	61161615	61138230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61138836_61161390
WTC11_00014684	chr11	-	2188	1	FSM	ENSG00000279549.1	ENST00000624057.1	2085	1	-122	19	-122	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61145586	61143398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61143400_61145600
WTC11_00014685	chr11	-	3563	21	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	0	76310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.4376652534967	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGGGGACCTATAGCGA	-61294860	True	NA	NA	False	NA	NA	NA	61295316	61181975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61182007_61258289_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
WTC11_00014686	chr11	-	3536	20	FSM	ENSG00000167992.14	ENST00000335613.10	3536	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	13.4646351191544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294860	True	NA	-5	True	ATTAAA	-20	NA	61295316	61258285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
WTC11_00014693	chr11	-	4351	26	FSM	ENSG00000167986.15	ENST00000680881.1	4335	26	0	-16	0	4	multi-exon	TRUE	canonical	3	1480	junction_17	155.540471903617	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTTGCTTTTATT	-61313044	True	NA	NA	False	AATAAA	-23	NA	61333110	61299446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
WTC11_00014709	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	65.4270118341883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-61361493	True	NA	49	True	AATATA	-17	NA	61362283	61348753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
WTC11_00014710	chr11	-	1891	8	NNC	ENSG00000162144.10	novel	2584	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	67.5730896805791	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-61361022	True	NA	-2	True	ATTAAA	-17	NA	61361869	61348804	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361243_61361343_61361732
WTC11_00014713	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	29.9666481275434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	-61361900	False	NA	-35	True	NA	NA	NA	61361913	61348837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
WTC11_00014717	chr11	-	3520	9	ISM	ENSG00000149532.16	ENST00000340437.8	3695	10	634	7	7	1	3prime_fragment	TRUE	canonical	3	166	junction_5	90.8952006433783	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	-61422260	False	7017	64	True	AATAAA	-24	NA	61429277	61402647	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181
WTC11_00014719	chr11	-	3568	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	-81	0	1	multi-exon	FALSE	canonical	3	233	junction_5	68.3017994087208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	-61422958	True	NA	64	True	AATAAA	-24	NA	61429975	61402647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
WTC11_00014720	chr11	-	3383	11	NIC	ENSG00000149532.16	novel	3487	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	123.753020165166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	-61422974	True	NA	64	True	AATAAA	-24	NA	61429991	61402647	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
WTC11_00014721	chr11	-	3651	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	-1	0	1	multi-exon	FALSE	canonical	3	166	junction_5	85.7230683331181	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	64	True	AATAAA	-24	NA	61430031	61402647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
WTC11_00014723	chr11	-	1362	5	FSM	ENSG00000149532.16	ENST00000537641.5	1728	5	0	366	0	69	multi-exon	FALSE	canonical	2	2	junction_3	171.173157942476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGAGAAGCCCCGTTCC	-61422958	True	NA	NA	False	NA	NA	NA	61429975	61410937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61411106_61411768_61411938_61415665_61416520_61429181_61429291_61429913
WTC11_00014733	chr11	-	591	1	FSM	ENSG00000279632.1	ENST00000623917.1	878	1	305	-18	305	18	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGTGCTTCCCCCCCA	-61420003	False	NA	NA	False	AAGAAA	-40	NA	61427020	61426429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61426400_61427000
WTC11_00014734	chr11	-	6842	11	FSM	ENSG00000011347.10	ENST00000535826.5	1621	11	-361	-4860	-85	-53	multi-exon	FALSE	canonical	3	25	junction_8	20.6400096899202	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTGGCACGCCCAG	-61581102	False	NA	NA	False	NA	NA	NA	61581233	61513766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61546030_61546256_61547176_61547309_61551383_61551464_61556103_61556208_61580789
WTC11_00014735	chr11	-	4854	9	FSM	ENSG00000011347.10	ENST00000263846.8	4854	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	10.5356537528527	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCC	-61580403	True	NA	-2	True	AATAAA	-17	NA	61581148	61515312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61551383_61551464_61556103_61556208_61580789
WTC11_00014736	chr11	-	520	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	58	0	-58	multi-exon	FALSE	canonical	3	5881	junction_3	1484.71164428204	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGATTTGTGTAGCAC	-61769027	True	NA	NA	False	NA	NA	NA	61792599	61789006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
WTC11_00014738	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3434.3198259141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769022	True	NA	-4	True	AATAAA	-16	NA	61792594	61789129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
WTC11_00014740	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	2860	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769044	True	NA	-4	True	AATAAA	-16	NA	61792616	61789129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61790374_61790603_61792555
WTC11_00014741	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4190.79867752623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	-61792788	False	NA	-5	True	AATAAA	-15	NA	61792802	61789130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
WTC11_00014747	chr11	-	582	5	FSM	ENSG00000149485.19	ENST00000545405.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	421.470639546814	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCTTGGGGAAGAT	-61815083	False	349	NA	False	NA	NA	NA	61815148	61810783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61815073
WTC11_00014749	chr11	-	2008	13	NNC	ENSG00000221968.9	novel	1790	12	NA	NA	-188	28488	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	123.112640383602	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTTCTGGCTTTAATG	-61891667	False	NA	NA	False	NA	NA	NA	61891733	61845030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61845064_61873528_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
WTC11_00014751	chr11	-	4927	8	FSM	ENSG00000221968.9	ENST00000533676.5	5314	8	384	3	384	0	multi-exon	FALSE	canonical	3	365	junction_4	38.7545915647029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGAGTGGAGTGGTGA	-61882076	False	NA	-12	True	ATTAAA	-15	NA	61882142	61873526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040
WTC11_00014758	chr11	-	2325	10	FSM	ENSG00000167994.13	ENST00000394836.7	2325	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	7.30465773950827	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-61917285	True	NA	-5	True	AATAAA	-18	NA	61917566	61897300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61906465_61906685_61907392_61907471_61907564_61907661_61908053_61908307_61917356
WTC11_00014761	chr11	-	1206	4	FSM	ENSG00000167996.16	ENST00000273550.12	1203	4	0	-3	0	3	multi-exon	FALSE	canonical	3	14373	junction_2	587.209408038469	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGATTTTTATCTATT	-61826342	True	NA	NA	False	AATAAA	-21	NA	61967634	61964281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311
WTC11_00014762	chr11	-	983	4	FSM	ENSG00000167996.16	ENST00000534180.1	983	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	6954.01423639613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826341	True	NA	-39	True	AATAAA	-15	NA	61967633	61964565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965113_61965368_61965578_61967311
WTC11_00014763	chr11	-	835	3	FSM	ENSG00000167996.16	ENST00000534719.1	788	3	-47	0	0	0	multi-exon	FALSE	canonical	3	14373	junction_1	719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGATAATGAAAGCTAA	-61826341	True	NA	NA	False	NA	NA	NA	61967633	61964746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61965113_61965368_61965516_61967311
WTC11_00014767	chr11	-	1964	13	FSM	ENSG00000255508.7	ENST00000526409.5	1954	13	0	-10	0	10	multi-exon	FALSE	canonical	1	6	junction_10	5144.86688292861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCTCCTTTGTGAG	NA	False	NA	-8	True	ATTAAA	-26	NA	62577321	62559592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62574676_62574909_62576656_62576750_62576906_62577018_62577181
WTC11_00014768	chr11	-	3978	18	NIC	ENSG00000255508.7	novel	5064	17	NA	NA	8	10	intron_retention	FALSE	canonical	2	6	junction_10	5241.37122698825	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCTCCTTTGTGAG	-62589381	True	NA	-8	True	ATTAAA	-26	NA	62591523	62559592	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830_62574909_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
WTC11_00014769	chr11	-	5074	17	FSM	ENSG00000255508.7	ENST00000496634.2	5064	17	0	-10	0	10	multi-exon	FALSE	canonical	2	6	junction_9	5398.17552367233	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCTCCTTTGTGAG	-62589389	True	NA	-8	True	ATTAAA	-26	NA	62591531	62559592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62574909_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
WTC11_00014770	chr11	-	657	6	NNC	ENSG00000278615.5	novel	646	4	NA	NA	0	92753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1338.64140082398	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTAAGCTCTTTTGGA	-62628963	True	NA	NA	False	NA	NA	NA	62665181	62570063	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62570079_62619699_62619725_62662816_62663160_62663235_62663334_62664848_62664974_62665130
WTC11_00014772	chr11	-	2778	9	FSM	ENSG00000149016.16	ENST00000308436.11	2826	9	48	0	23	0	multi-exon	FALSE	canonical	3	182	junction_1	35.2907565801585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTTCCTTTCATTTCC	-62591288	False	NA	NA	False	AATAAA	-24	NA	62591589	62575044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
WTC11_00014774	chr11	-	1866	3	FSM	ENSG00000149016.16	ENST00000463241.2	752	3	0	-1114	0	-72	multi-exon	FALSE	canonical	3	270	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTCCCTCAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	62577316	62575129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62576750_62576906_62577018_62577181
WTC11_00014779	chr11	-	3660	19	NIC	ENSG00000149499.12	novel	3266	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_17	26.8907253734649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-62612497	False	2059	-1	True	AATAAA	-17	NA	62612530	62602217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62602679_62602758_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62609478_62609628_62609697_62610878_62610993_62611086_62611348_62611424_62611597_62612435
WTC11_00014781	chr11	-	3251	21	NIC	ENSG00000149499.12	novel	3266	22	NA	NA	-116	0	intron_retention	FALSE	canonical	1	2	junction_1	30.6473489881262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-62612858	False	NA	-1	True	AATAAA	-17	NA	62612891	62602217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62602679_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
WTC11_00014785	chr11	-	1428	5	NNC	ENSG00000149541.10	novel	1452	5	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	88.0209492109691	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTCTTGTTTTCCTTTG	-62619912	True	NA	-26	True	AATAAA	-17	NA	62621971	62615294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621875
WTC11_00014786	chr11	-	1454	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	-2	0	2	multi-exon	FALSE	canonical	3	123	junction_4	47.4341649025257	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTTGTTTTCCTTTGC	-62619927	True	NA	-25	True	AATAAA	-18	NA	62621986	62615293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
WTC11_00014787	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	76.4852927038918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	-62619925	True	NA	NA	False	NA	NA	NA	62621984	62616066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
WTC11_00014788	chr11	-	576	2	FSM	ENSG00000149541.10	ENST00000533303.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCCCAGCAGGCCCTT	-62617435	False	NA	NA	False	NA	NA	NA	62617454	62616688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62616797_62616986
WTC11_00014789	chr11	-	3909	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_18	367.263784628978	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-62629165	True	NA	75	True	AATAAA	-22	NA	62646615	62624822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
WTC11_00014790	chr11	-	3851	24	NIC	ENSG00000089597.18	novel	3835	24	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	275.30825479938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-62629173	True	NA	75	True	AATAAA	-22	NA	62646623	62624822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633268_62633440_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
WTC11_00014791	chr11	-	3841	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	-6	0	3	multi-exon	FALSE	canonical	0	0	junction_18	282.204748097496	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-62629163	True	NA	75	True	AATAAA	-22	NA	62646613	62624822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
WTC11_00014793	chr11	-	3846	25	FSM	ENSG00000089597.18	ENST00000648273.1	3846	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	388.995385219699	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGGGGGAGGACTAATG	-62629156	True	NA	-53	True	NA	NA	NA	62646606	62624950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62639929_62640070_62646561
WTC11_00014806	chr11	-	784	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	-10	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_2	47.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628973	True	NA	-1	True	AATAAA	-16	NA	62665191	62662816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848
WTC11_00014808	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	2	3	junction_6	1332.83432328753	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62655747	False	NA	-1	True	AATAAA	-16	NA	62671769	62662816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
WTC11_00014809	chr11	-	1290	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	1	0	0	multi-exon	FALSE	canonical	3	887	junction_4	68.6416307308309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	-62663033	True	NA	-1	True	AATAAA	-20	NA	62679055	62676498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
WTC11_00014810	chr11	-	2072	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	1	0	0	multi-exon	FALSE	canonical	3	887	junction_2	81.6945530620004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	-62663036	True	NA	-1	True	AATAAA	-20	NA	62679058	62676498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
WTC11_00014811	chr11	-	1134	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_5	68.6639233877587	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	-62663051	True	NA	-2	True	AATAAA	-19	NA	62679073	62676499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
WTC11_00014812	chr11	-	1913	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	-1	0	0	multi-exon	FALSE	canonical	3	887	junction_3	77.5577204409722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	-62663051	True	NA	-2	True	AATAAA	-19	NA	62679073	62676499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
WTC11_00014813	chr11	-	1273	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	-16	0	0	multi-exon	FALSE	canonical	3	887	junction_4	73.404387345939	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGACTCCTTCCTG	-62663045	True	NA	-3	True	AATAAA	-18	NA	62679067	62676500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
WTC11_00014814	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	292.109948858683	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-62663059	True	NA	-115	True	NA	NA	NA	62679081	62676612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
WTC11_00014821	chr11	-	2129	8	FSM	ENSG00000168000.16	ENST00000683846.1	2807	8	0	678	0	308	multi-exon	FALSE	canonical	3	384	junction_7	55.0012986859661	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCCTCCCTTTCTCT	-62695512	False	NA	NA	False	NA	NA	NA	62695537	62689966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567
WTC11_00014822	chr11	-	1379	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	-15	0	14	multi-exon	FALSE	canonical	3	71	junction_4	152.841077795625	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62706303	False	NA	-23	True	AATAAA	-33	NA	62706315	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
WTC11_00014823	chr11	-	1724	11	FSM	ENSG00000168000.16	ENST00000360796.10	1710	11	0	-14	0	14	multi-exon	FALSE	canonical	3	202	junction_10	92.2520460477707	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62704339	True	NA	-23	True	AATAAA	-33	NA	62707424	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00014824	chr11	-	1703	10	FSM	ENSG00000168000.16	ENST00000449636.6	2381	10	0	678	0	308	multi-exon	FALSE	canonical	2	5	junction_9	153.200747830428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCCTCCCTTTCTCT	-62704341	True	NA	NA	False	NA	NA	NA	62707426	62689966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62707108
WTC11_00014825	chr11	-	2076	10	FSM	ENSG00000168000.16	ENST00000684115.1	3048	10	0	972	0	14	multi-exon	FALSE	canonical	3	202	junction_9	97.2055223752587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62707575	False	NA	-23	True	AATAAA	-33	NA	62707587	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00014826	chr11	-	1792	8	FSM	ENSG00000168000.16	ENST00000682262.1	2764	8	0	972	0	14	multi-exon	FALSE	canonical	2	7	junction_4	184.850518759657	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62707575	False	NA	-23	True	AATAAA	-33	NA	62707587	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691422_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00014827	chr11	-	1752	10	FSM	ENSG00000168000.16	ENST00000684475.1	2724	10	0	972	0	14	multi-exon	FALSE	canonical	1	7	junction_6	167.00099800101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62707575	False	NA	-23	True	AATAAA	-33	NA	62707587	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00014828	chr11	-	1896	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	-14	0	14	multi-exon	FALSE	canonical	2	6	junction_2	151.848773455698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62707575	False	NA	-23	True	AATAAA	-33	NA	62707587	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00014829	chr11	-	2015	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	-14	0	14	multi-exon	FALSE	canonical	2	12	junction_11	150.64050578603	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62709405	True	NA	-23	True	AATAAA	-33	NA	62709537	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
WTC11_00014830	chr11	-	4015	24	FSM	ENSG00000234857.2	ENST00000403734.2	4001	24	0	-14	0	14	multi-exon	FALSE	canonical	2	4	junction_11	206.289049691651	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTCAGGGCCATTTG	-62727374	False	NA	-23	True	AATAAA	-33	NA	62727384	62690260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
WTC11_00014831	chr11	-	1712	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	-19	0	0	multi-exon	FALSE	canonical	3	29	junction_10	139.100287562607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62706222	False	NA	-38	True	AATAAA	-18	NA	62706234	62690275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
WTC11_00014832	chr11	-	1535	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	-19	0	0	multi-exon	FALSE	canonical	3	173	junction_10	99.7569546447765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62706332	False	NA	-38	True	AATAAA	-18	NA	62706344	62690275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
WTC11_00014837	chr11	-	935	3	NNC	ENSG00000168569.8	novel	1273	2	NA	NA	0	77433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGGTAGGGATTC	-62787759	True	NA	NA	False	NA	NA	NA	62791997	62694195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62694224_62790327_62790916_62791678
WTC11_00014840	chr11	-	5235	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	-21	0	21	multi-exon	FALSE	canonical	3	24	junction_1	10.1287568820824	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGGCGGAGGGTGTC	-62721169	True	NA	17	True	AATAAA	-43	NA	62727457	62712608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
WTC11_00014843	chr11	-	3282	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3948	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	3.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	-62758107	False	NA	-5	True	CATAAA	-27	NA	62758132	62750962	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62753716_62754237_62754520_62757885
WTC11_00014844	chr11	-	487	1	FSM	ENSG00000267811.1	ENST00000596071.1	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTTGATTTTCTTTGTC	NA	False	NA	1	True	AATAAA	-15	NA	62771606	62771119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62771100_62771600
WTC11_00014845	chr11	-	566	4	FSM	ENSG00000168569.8	ENST00000527073.1	563	4	0	-3	0	3	multi-exon	FALSE	canonical	3	7	junction_1	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGGGGTCACTGAACT	-62791677	False	NA	NA	False	NA	NA	NA	62791743	62771625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62772000_62772076_62772133_62774594_62774666_62791678
WTC11_00014846	chr11	-	857	3	FSM	ENSG00000168569.8	ENST00000528367.1	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGATCGGGGAGGGG	-62787754	True	NA	NA	False	NA	NA	NA	62791992	62771660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62772133_62774594_62774666_62791678
WTC11_00014847	chr11	-	870	1	FSM	ENSG00000269176.2	ENST00000601484.2	763	1	-114	7	-114	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCACTGCCCTGTGTGC	-62782661	False	NA	-9	True	AATAAA	-37	NA	62786899	62786029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62786000_62786900
WTC11_00014848	chr11	-	727	2	FSM	ENSG00000168569.8	ENST00000307366.8	1273	2	14	532	0	-532	multi-exon	FALSE	canonical	3	592	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCGAGCCCAGGCTGG	-62787754	True	NA	NA	False	NA	NA	NA	62791992	62790502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62790916_62791678
WTC11_00014849	chr11	-	4103	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	25	0	-5	0	multi-exon	TRUE	canonical	3	156	junction_10	16.4860387505371	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	-62804051	True	NA	-5	True	TATAAA	-21	NA	62805445	62792122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
WTC11_00014850	chr11	-	2293	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	-3	0	3	multi-exon	FALSE	canonical	3	150	junction_11	17.2669481959031	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTGCGTGCTGGATT	-62804046	True	NA	-9	True	TATAAA	-17	NA	62805440	62792126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
WTC11_00014851	chr11	-	619	6	FSM	ENSG00000162231.14	ENST00000527902.5	619	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	69.5402041987223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGTACTTAACCC	-62796067	False	NA	-65	True	ACTAAA	-18	NA	62796082	62792230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065
WTC11_00014854	chr11	-	1794	11	FSM	ENSG00000162236.13	ENST00000294179.8	1794	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	12.6317061397105	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGCAGCGAGTGGAG	-62832035	False	10760	35	True	NA	NA	NA	62832051	62806859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
WTC11_00014855	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	55.3584681868998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	-62832026	False	10760	-30	True	NA	NA	NA	62832042	62806924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
WTC11_00014857	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	175.56476769079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828821	True	NA	-5	True	AATAAA	-15	NA	62839581	62832910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
WTC11_00014858	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_6	27.343006418461	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828830	True	NA	-5	True	AATAAA	-15	NA	62839590	62832910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
WTC11_00014859	chr11	-	1503	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	-137	0	87	0	multi-exon	FALSE	canonical	1	2	junction_11	170.866242210896	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	-62840277	False	NA	-6	True	AATAAA	-14	NA	62840293	62832911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
WTC11_00014861	chr11	-	1637	12	FSM	ENSG00000133316.16	ENST00000525752.5	1724	12	87	0	87	0	multi-exon	FALSE	canonical	1	4	junction_10	226.4674460761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCTGTGCCCACTTTGT	-62840277	False	NA	-46	True	NA	NA	NA	62840293	62832951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839540_62839868_62840077
WTC11_00014867	chr11	-	1212	9	FSM	ENSG00000255717.8	ENST00000663967.1	1202	9	0	-10	0	0	multi-exon	FALSE	canonical	3	183	junction_8	25.0271727328518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846265	False	NA	-38	True	AATAAA	-26	NA	62855367	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132
WTC11_00014868	chr11	-	1737	8	FSM	ENSG00000255717.8	ENST00000537024.6	1727	8	0	-10	0	0	multi-exon	FALSE	canonical	3	178	junction_7	30.9047252182628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846377	False	NA	-38	True	AATAAA	-26	NA	62855479	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00014869	chr11	-	1710	9	FSM	ENSG00000255717.8	ENST00000544550.6	1689	9	0	-21	0	0	multi-exon	FALSE	canonical	3	178	junction_8	28.5263036511918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846735	True	NA	-38	True	AATAAA	-26	NA	62855837	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00014871	chr11	-	2779	5	FSM	ENSG00000255717.8	ENST00000538654.6	2769	5	0	-10	0	0	multi-exon	FALSE	canonical	3	199	junction_3	24.9136007032304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846783	True	NA	-38	True	AATAAA	-26	NA	62855885	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853591_62853800_62854065_62854518_62854552_62854887
WTC11_00014872	chr11	-	1461	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	-23	0	0	multi-exon	FALSE	canonical	3	88	junction_9	50.6866432353646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846783	True	NA	-38	True	AATAAA	-26	NA	62855885	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
WTC11_00014873	chr11	-	2368	7	FSM	ENSG00000255717.8	ENST00000661936.1	2345	7	0	-23	0	0	multi-exon	FALSE	canonical	3	183	junction_6	25.9834348939644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846783	True	NA	-38	True	AATAAA	-26	NA	62855885	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132
WTC11_00014874	chr11	-	1126	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	48.1257727210691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846784	True	NA	-38	True	AATAAA	-26	NA	62855886	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
WTC11_00014875	chr11	-	1764	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	41	-23	0	0	multi-exon	FALSE	canonical	3	88	junction_8	53.4460884911141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846784	True	NA	-38	True	AATAAA	-26	NA	62855886	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
WTC11_00014876	chr11	-	1383	9	NIC	ENSG00000255717.8	novel	1513	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	72.9870493649387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-62846681	True	NA	-47	True	AATAAA	-17	NA	62855783	62851986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62852682_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00014879	chr11	-	2173	8	FSM	ENSG00000255717.8	ENST00000656589.1	2152	8	0	-21	0	0	multi-exon	FALSE	canonical	3	88	junction_7	55.4973799712515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTGATTACATAGTC	-62846784	True	NA	-65	True	NA	NA	NA	62855886	62852004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
WTC11_00014880	chr11	-	1828	9	FSM	ENSG00000255717.8	ENST00000656241.1	1828	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	28.9482296522603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGACTGGCTGTCAA	-62846735	True	NA	-121	True	AAAAAG	-5	NA	62855837	62852060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00014881	chr11	-	1255	10	FSM	ENSG00000255717.8	ENST00000663092.1	1320	10	65	0	-2	0	multi-exon	FALSE	canonical	3	88	junction_9	47.6027802902102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGACTGGCTGTCAA	-62846786	False	NA	-121	True	AAAAAG	-5	NA	62855888	62852060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
WTC11_00014882	chr11	-	3302	3	FSM	ENSG00000255717.8	ENST00000668309.1	3302	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	40	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTGCATATTGCAAATA	-62846754	True	NA	NA	False	NA	NA	NA	62855856	62852137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62853591_62853800_62855217_62855423
WTC11_00014886	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63491150	False	NA	-4	True	ATTAAA	-16	NA	63491167	63461403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
WTC11_00014888	chr11	-	3113	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	0	-519	0	519	multi-exon	FALSE	canonical	3	1191	junction_3	76.1883630659346	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTAATTAATGAGAGATG	-63603039	True	NA	NA	False	NA	NA	NA	63614369	63572675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
WTC11_00014889	chr11	-	1105	5	NNC	ENSG00000176485.13	novel	1075	5	NA	NA	0	336	intron_retention	FALSE	non_canonical	0	0	junction_1	555.590001709894	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATATAGGCTTTAA	-63603103	True	NA	NA	False	AAAAAG	-3	NA	63614433	63572858	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63572886_63574774_63575047_63590099_63590369_63598060_63598164_63613999
WTC11_00014891	chr11	-	2971	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	-110	-1786	-110	519	multi-exon	FALSE	canonical	3	560	junction_4	316.133278855612	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTAATTAATGAGAGATG	-63603213	True	NA	NA	False	NA	NA	NA	63614543	63572675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
WTC11_00014893	chr11	-	7206	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	-308	1	62	-1	multi-exon	FALSE	canonical	3	120	junction_7	18.891503087073	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATCTGTGTTTTCTTT	-63671636	False	NA	-12	True	AATAAA	-13	NA	63671684	63624087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
WTC11_00014894	chr11	-	1695	13	FSM	ENSG00000184743.13	ENST00000538786.1	1920	13	225	0	62	0	multi-exon	FALSE	canonical	1	3	junction_12	46.3417258586207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGTTCATATCCAGAG	-63671636	False	NA	-96	True	NA	NA	NA	63671684	63629252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671635
WTC11_00014895	chr11	-	383	1	FSM	ENSG00000271100.1	ENST00000604083.1	169	1	12	-226	12	226	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGCTTGACCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	63698752	63698369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63698400_63698800
WTC11_00014897	chr11	-	5710	5	FSM	ENSG00000188070.9	ENST00000433688.2	5716	5	0	6	0	-6	multi-exon	FALSE	canonical	3	10	junction_3	6.75925291729789	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCATTGTTTGTGTTTTT	-63765470	True	NA	-6	True	AATAAA	-19	NA	63768775	63759897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63763870_63764037_63764599_63764867_63765255_63765806_63766305_63768483
WTC11_00014898	chr11	-	2924	12	FSM	ENSG00000167771.6	ENST00000301459.5	2915	12	0	-9	0	9	multi-exon	FALSE	canonical	3	324	junction_5	18.0527235188013	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTCCCTTTTGGTG	-63913489	True	NA	-1	True	AATAAA	-16	NA	63917164	63911220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
WTC11_00014899	chr11	-	783	3	FSM	ENSG00000167771.6	ENST00000489217.1	792	3	9	0	9	0	multi-exon	FALSE	canonical	3	325	junction_1	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAGCACCCTCACTC	-63912820	False	NA	NA	False	NA	NA	NA	63912947	63911887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63912535_63912675_63912734_63912869
WTC11_00014901	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_8	34.035863438438	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64162898	True	NA	-6	True	AATAAA	-16	NA	64166113	63998557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
WTC11_00014902	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	27	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	-63999096	False	NA	-8	True	AATAAA	-14	NA	63999222	63998559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63998688_63998837_63998873_63998954
WTC11_00014903	chr11	-	1220	10	FSM	ENSG00000133315.12	ENST00000675777.1	1214	10	0	-6	0	0	multi-exon	FALSE	canonical	2	6	junction_1	101.181660369168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	-64162898	True	NA	-8	True	AATAAA	-14	NA	64166113	63998559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63998688_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
WTC11_00014907	chr11	-	1860	8	NNC	ENSG00000257086.1	novel	853	4	NA	NA	0	44539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2591.84539095453	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCCTGGTGGCTGCA	-64248676	False	818	NA	False	ACTAAA	-26	NA	64249494	64202399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64202428_64244483_64244823_64244929_64244963_64245203_64245288_64246415_64247360_64248049_64248173_64248400_64248599_64249383
WTC11_00014908	chr11	-	988	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	-20	0	3	multi-exon	TRUE	canonical	0	0	junction_7	130.552515041547	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGGTCTTCCTTGTGT	-64222968	True	NA	1	True	AAGAAA	-38	NA	64226186	64223795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
WTC11_00014912	chr11	-	403	4	FSM	ENSG00000149743.14	ENST00000546133.5	382	4	0	-21	0	7	multi-exon	FALSE	canonical	3	46	junction_2	161.147965133497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTGTAGCTACATCTG	-64221448	False	NA	-12	True	AAAAAG	-35	NA	64224666	64223808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224163_64224284_64224342_64224542
WTC11_00014915	chr11	-	1732	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	15	-21	15	7	multi-exon	FALSE	canonical	0	0	junction_5	143.344898758205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTGTAGCTACATCTG	-64222996	True	NA	-12	True	AAAAAG	-35	NA	64226214	64223808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
WTC11_00014916	chr11	-	908	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	-79	36	0	-2	multi-exon	FALSE	canonical	0	0	junction_6	141.008273988916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTCGTTTGAAACCAT	-64223011	True	NA	-38	True	AATAAA	-41	NA	64226229	64223834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
WTC11_00014919	chr11	-	907	8	NNC	ENSG00000149743.14	novel	968	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	114.596719688067	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGTAACAAGAAA	-64222956	True	NA	-56	True	AATAAA	-23	NA	64226174	64223852	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226061
WTC11_00014921	chr11	-	814	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	116.964498364038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATTTTAAAAAGTAACAA	-64222996	True	NA	-60	True	AATAAA	-19	NA	64226214	64223856	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
WTC11_00014923	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	5226	junction_1	72.3709579565972	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-64215871	True	NA	-5	True	AATAAA	-28	NA	64246943	64244478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
WTC11_00014925	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	14.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281342	True	NA	-3	True	AATAAA	-19	NA	64284639	64269829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64270338_64271612_64271804_64284181
WTC11_00014926	chr11	-	970	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	-38	-3	1	3	multi-exon	FALSE	canonical	3	240	junction_3	53.8784640546563	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGTGCGTCGACTG	-64281406	True	NA	0	True	AATAAA	-22	NA	64284703	64269826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
WTC11_00014932	chr11	-	823	3	FSM	ENSG00000173113.7	ENST00000535750.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	4994	junction_1	80.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTATTGCTTCAAGG	-64254700	True	NA	64	True	GGGGCT	-10	NA	64317487	64316459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64316969_64317057_64317148_64317263
WTC11_00014935	chr11	-	660	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	-1	0	0	multi-exon	TRUE	canonical	3	4956	junction_2	99.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-64254766	True	NA	-11	True	ATTAAA	-12	NA	64317553	64316694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64317148_64317263_64317366_64317448
WTC11_00014936	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	2307.57727690513	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-64254771	True	NA	-11	True	ATTAAA	-12	NA	64317558	64316694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
WTC11_00014938	chr11	-	2217	15	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	1771	6	586	-6	3prime_fragment	FALSE	canonical	3	26	junction_12	47.1454544739047	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACCATCAGCGCCTAG	-64742328	False	1588	-7	True	AATAAA	-18	NA	64742351	64726916	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009
WTC11_00014939	chr11	-	524	4	NNC	ENSG00000068831.19	novel	667	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	78.1977550118217	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64741080_64741438_64741504_64742011_64742113_64742793
WTC11_00014940	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	85	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741534_64742793
WTC11_00014941	chr11	-	2176	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	-2	0	0	multi-exon	FALSE	canonical	3	159	junction_3	5.90668171555645	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744566	False	NA	-1	True	AATAAA	-17	NA	64744589	64740865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
WTC11_00014942	chr11	-	642	5	FSM	ENSG00000068831.19	ENST00000377487.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	52.7873090808766	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744648	True	NA	-1	True	AATAAA	-17	NA	64744859	64740865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
WTC11_00014943	chr11	-	2875	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	-9	0	0	multi-exon	FALSE	canonical	3	13	junction_17	5.26631484267326	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTTGTTGGGAAATA	-64759355	True	NA	-1	True	AATAAA	-26	NA	64759974	64746388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
WTC11_00014944	chr11	-	3096	14	NIC	ENSG00000168066.21	novel	3094	14	NA	NA	60	0	intron_retention	FALSE	canonical	3	59	junction_4	297.589666264566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778393	False	118	-22	True	AATAAA	-22	NA	64778409	64764605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64765519_64765950_64766156_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
WTC11_00014945	chr11	-	2856	13	FSM	ENSG00000168066.21	ENST00000227503.13	2850	13	0	-6	0	6	multi-exon	FALSE	canonical	3	231	junction_1	157.396968063415	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTCTTTTTAATG	-64778731	False	NA	-16	True	AATAAA	-28	NA	64778747	64764599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
WTC11_00014946	chr11	-	2953	13	FSM	ENSG00000168066.21	ENST00000377387.5	2947	13	0	-6	0	6	multi-exon	FALSE	canonical	3	94	junction_12	231.794569009333	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTCTTTTTAATG	-64778453	False	NA	-16	True	AATAAA	-28	NA	64778469	64764599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
WTC11_00014947	chr11	-	3642	13	FSM	ENSG00000168066.21	ENST00000681407.1	3631	13	0	-11	0	6	multi-exon	FALSE	canonical	3	94	junction_12	205.584667608155	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTCTTTTTAATG	-64762478	True	NA	-16	True	AATAAA	-28	NA	64778521	64764599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
WTC11_00014949	chr11	-	2860	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	-6	0	6	multi-exon	FALSE	canonical	3	59	junction_3	241.094840720871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTCTTTTTAATG	-64778731	False	NA	-16	True	AATAAA	-28	NA	64778747	64764599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
WTC11_00014951	chr11	-	3100	14	FSM	ENSG00000168066.21	ENST00000334944.9	3094	14	0	-6	0	6	multi-exon	FALSE	canonical	3	71	junction_1	204.638662643501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTCTTTTTAATG	-64778770	False	NA	-16	True	AATAAA	-28	NA	64778786	64764599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64765950_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
WTC11_00014953	chr11	-	843	4	FSM	ENSG00000168066.21	ENST00000413725.5	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	289.625428595089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCCCGTAGCATCGAGT	-64767523	False	NA	NA	False	NA	NA	NA	64767617	64765603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767566
WTC11_00014955	chr11	-	2187	13	NIC	ENSG00000168066.21	novel	3094	14	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	204.614678522013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCCGCCTCTGCCGCCT	-64778851	False	NA	NA	False	NA	NA	NA	64778867	64766020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64766156_64766899_64767080_64767191_64767247_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
WTC11_00014958	chr11	-	642	5	FSM	ENSG00000168066.21	ENST00000413951.5	623	5	0	-19	0	0	multi-exon	FALSE	canonical	3	39	junction_4	360.088183643951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCCACCTGCAGATTAC	-64762464	True	NA	NA	False	NA	NA	NA	64778507	64770277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64770409_64773429_64773506_64776497_64776627_64777986_64778147_64778361
WTC11_00014965	chr11	-	563	7	FSM	ENSG00000168067.12	ENST00000467689.1	574	7	0	11	0	-11	multi-exon	FALSE	canonical	3	78	junction_4	6.64371047599825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTGCCCCAAGCC	-64798854	False	NA	NA	False	NA	NA	NA	64799634	64796981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64797024_64797103_64797193_64797274_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604
WTC11_00014967	chr11	-	2691	9	FSM	ENSG00000133895.18	ENST00000377313.6	2691	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	131.460783125615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64810119	False	NA	-14	True	AATACA	-18	NA	64810132	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809649
WTC11_00014968	chr11	-	2960	10	FSM	ENSG00000133895.18	ENST00000315422.9	2960	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_9	82.9954632108301	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64805855	True	NA	-14	True	AATACA	-18	NA	64810551	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810267
WTC11_00014969	chr11	-	2714	10	FSM	ENSG00000133895.18	ENST00000450708.7	2712	10	0	-2	0	0	multi-exon	FALSE	canonical	3	91	junction_9	102.673159967821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64805855	True	NA	-14	True	AATACA	-18	NA	64810551	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
WTC11_00014971	chr11	-	2616	10	FSM	ENSG00000133895.18	ENST00000377321.5	2614	10	0	-2	0	0	multi-exon	FALSE	canonical	3	49	junction_7	142.054588707438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64805862	True	NA	-14	True	AATACA	-18	NA	64810558	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807995_64808100_64809664_64810133_64810513
WTC11_00014972	chr11	-	3152	9	FSM	ENSG00000133895.18	ENST00000377326.7	3150	9	0	-2	0	0	multi-exon	FALSE	canonical	3	376	junction_3	20.2607995893548	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64810595	False	NA	-14	True	AATACA	-18	NA	64810608	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664
WTC11_00014973	chr11	-	2708	10	FSM	ENSG00000133895.18	ENST00000312049.11	2731	10	23	0	23	0	multi-exon	FALSE	canonical	1	2	junction_9	130.258811696911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	-64810650	False	NA	-16	True	AATACA	-16	NA	64810663	64803515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810629
WTC11_00014974	chr11	-	3124	9	FSM	ENSG00000133895.18	ENST00000478548.3	3124	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	108.901259749371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATTTTGTTAAAAAAAA	-64805826	True	NA	27	True	AAGAAA	-6	NA	64810522	64803535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
WTC11_00014976	chr11	-	2544	8	FSM	ENSG00000133895.18	ENST00000671939.2	2535	8	0	-9	0	0	multi-exon	FALSE	canonical	3	376	junction_3	19.1599071191988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGTTTTGTACATA	-64809848	False	NA	-22	True	NA	NA	NA	64809861	64803584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64808100_64809664
WTC11_00014979	chr11	-	6162	37	FSM	ENSG00000171219.9	ENST00000342711.6	6161	37	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_32	8.50145230875435	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTCCTTGCCTGGAT	-64844107	True	NA	NA	False	AATAAA	-17	NA	64844653	64823050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64824530_64826469_64826556_64826670_64826795_64827049_64827168_64827277_64827399_64827526_64827612_64827685_64827784_64829470_64830071_64830193_64830257_64831504_64831722_64832427_64832510_64832603_64832744_64832825_64832960_64833230_64833337_64833599_64833660_64833737_64833837_64833924_64833978_64834265_64834355_64834428_64834578_64834848_64834964_64835046_64835154_64835346_64835420_64835499_64835622_64835761_64835852_64836116_64836297_64836426_64836531_64836738_64836820_64836921_64837020_64838082_64838163_64838653_64838903_64839032_64839234_64839477_64839572_64840119_64840269_64840552_64840649_64841649_64841734_64841812_64841905_64844409
WTC11_00014980	chr11	-	4285	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	168	0	-168	multi-exon	FALSE	canonical	3	115	junction_4	6.89202437604511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGCAAACCAGGCC	-64874996	True	NA	NA	False	NA	NA	NA	64878621	64851809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
WTC11_00014981	chr11	-	6331	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-32	3	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_14	9.82585874109739	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTCAGATCCTCTGTC	-64916002	True	NA	-10	True	AATAAA	-17	NA	64917243	64894542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
WTC11_00014982	chr11	-	748	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	4	0	-4	multi-exon	FALSE	canonical	3	11	junction_3	1.69967317119759	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTCTCTCTTTATTAA	-64935785	False	NA	-3	True	AATAAA	-13	NA	64935893	64934474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
WTC11_00014983	chr11	-	2064	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	1	1	1	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGCCTAGTTACT	-64996860	True	NA	-3	True	AATAAA	-16	NA	64996970	64987945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64989813_64994447_64994550_64996875
WTC11_00014984	chr11	-	553	4	FSM	ENSG00000168060.16	ENST00000532802.5	566	4	13	0	-12	0	multi-exon	FALSE	canonical	1	1	junction_3	5.65685424949238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCGGCAGCCACCCT	-65047799	True	NA	NA	False	NA	NA	NA	65047873	65045312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65047646
WTC11_00014985	chr11	-	595	6	NNC	ENSG00000149806.11	novel	506	5	NA	NA	0	69322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2644.21728305372	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAGAGAGAGACTTGA	-65040373	True	NA	NA	False	AAAAAG	-8	NA	65122177	65051307	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65051355_65120630_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
WTC11_00014986	chr11	-	2474	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	1	0	-1	multi-exon	FALSE	canonical	3	400	junction_1	61.0868234564542	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGTGTTTCTTTTAT	-65074688	True	NA	-6	True	ATTAAA	-17	NA	65084040	65077453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
WTC11_00014987	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_4	52.0978646395416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	-65074695	True	NA	NA	False	NA	NA	NA	65084047	65079087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
WTC11_00014990	chr11	-	1304	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTTTCTGAGGGAT	-65117682	False	81804	-3	True	AATAAA	-20	NA	65117701	65116397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65116400_65117700
WTC11_00014991	chr11	-	505	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	1	0	0	multi-exon	FALSE	canonical	3	5602	junction_4	543.190114048479	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-65040330	True	NA	-5	True	AATAAA	-20	NA	65122134	65120630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
WTC11_00014992	chr11	-	3147	16	FSM	ENSG00000162298.19	ENST00000526060.5	3144	16	0	-3	0	0	multi-exon	FALSE	canonical	2	5	junction_15	38.9623179780441	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65134286	False	NA	-29	True	AATAAA	-16	NA	65134429	65127278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134253
WTC11_00014993	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	27.9248197049785	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131019	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
WTC11_00014998	chr11	-	3597	11	NNC	ENSG00000173327.8	novel	3543	10	NA	NA	0	78325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.5968196986368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCTTGCCTGTAA	-65612846	True	NA	NA	False	AATACA	-28	NA	65614248	65519430	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65519458_65597756_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690_65606805_65607269_65607514_65607640_65607817_65607921_65608071_65608267_65608449_65613017
WTC11_00014999	chr11	-	1802	12	FSM	ENSG00000168056.18	ENST00000529189.5	1997	12	195	0	195	0	multi-exon	FALSE	canonical	3	15	junction_11	54.5068044884048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGGCTTTCGAAGCAA	-65546433	False	NA	-18	True	GATAAA	-18	NA	65546564	65538818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441
WTC11_00015000	chr11	-	763	6	FSM	ENSG00000168056.18	ENST00000532661.6	863	6	31	69	31	-69	multi-exon	FALSE	canonical	3	45	junction_5	50.2537560785261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTCTGCAAAGCCGGCTT	-65540429	True	NA	NA	False	NA	NA	NA	65540652	65539148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485
WTC11_00015001	chr11	-	528	4	FSM	ENSG00000168056.18	ENST00000529764.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.49691252107735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTGGCCACGGAGAG	-65551796	False	NA	NA	False	NA	NA	NA	65551876	65548018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65548046_65551125_65551225_65551401_65551475_65551547
WTC11_00015005	chr11	-	3553	10	FSM	ENSG00000173327.8	ENST00000309100.8	3543	10	0	-10	0	9	multi-exon	FALSE	canonical	3	163	junction_7	16.7029235261671	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTTCTTGGAGGTAA	-65612819	True	NA	7	True	AATAAA	-30	NA	65614221	65597746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690_65606805_65607269_65607514_65607640_65607817_65607921_65608071_65608267_65608449_65613017
WTC11_00015009	chr11	-	4156	1	FSM	ENSG00000173327.8	ENST00000527304.1	5605	1	1270	179	1255	-179	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTGTCTCTACTAAAAA	-65612888	False	NA	NA	False	NA	NA	NA	65612966	65608810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65608800_65613000
WTC11_00015010	chr11	-	2523	11	FSM	ENSG00000173039.20	ENST00000406246.8	2517	11	0	-6	0	4	multi-exon	FALSE	canonical	3	85	junction_4	7.3729234364667	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGCTTTTTTTCAGCAAA	-65660605	True	NA	-17	True	AATAAA	-23	NA	65662916	65653594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
WTC11_00015011	chr11	-	215	3	FSM	ENSG00000173039.20	ENST00000526257.1	215	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	44	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTCCCCAAGCCAGG	-65659727	False	NA	NA	False	NA	NA	NA	65659743	65655706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65655763_65655854_65655936_65659665
WTC11_00015012	chr11	-	513	5	FSM	ENSG00000173039.20	ENST00000527074.5	585	5	0	72	0	32	multi-exon	FALSE	canonical	3	86	junction_4	8.20060973342836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCAAACCTGCCTGC	-65660607	True	NA	NA	False	NA	NA	NA	65662918	65660123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
WTC11_00015016	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	60.9061208381847	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	-65714317	True	NA	-12	True	AATAAA	-21	NA	65720798	65717672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
WTC11_00015017	chr11	-	2643	2	FSM	ENSG00000172922.11	ENST00000643214.1	2643	2	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714105	False	NA	-48	True	NA	NA	NA	65720586	65717708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719810_65720044
WTC11_00015018	chr11	-	2798	3	FSM	ENSG00000172922.11	ENST00000528220.2	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	34	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714337	True	NA	-48	True	NA	NA	NA	65720818	65717708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719810_65720044_65720165_65720241
WTC11_00015019	chr11	-	6980	2	FSM	ENSG00000254470.3	ENST00000532090.3	6980	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTTTTGTTTTTGGT	-65780367	True	NA	-3	True	AATAAA	-17	NA	65780976	65773897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65780343_65780441
WTC11_00015020	chr11	-	1263	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	-18	0	18	multi-exon	FALSE	canonical	3	10523	junction_1	20.1714870272097	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATGGTCACCATTATT	-65649200	True	NA	-17	True	NA	NA	NA	65858180	65854654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
WTC11_00015021	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10553	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	-65649214	True	NA	-46	True	ATTAAA	-3	NA	65858194	65854831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65856243_65858096
WTC11_00015023	chr11	-	1422	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	-326	-34	0	0	multi-exon	FALSE	canonical	3	157	junction_3	4898.16952204256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	-65649214	True	NA	-65	True	NA	NA	NA	65858194	65854974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
WTC11_00015026	chr11	-	2595	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	-785	3	-4	-2	multi-exon	FALSE	canonical	1	3	junction_1	18.4094837219595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTTCAATCTTTT	-65873246	True	NA	-3	True	TATAAA	-18	NA	65873596	65866443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
WTC11_00015030	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	244.310367269904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	NA	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
WTC11_00015032	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	298.690789111415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-65880687	True	NA	-111	True	NA	NA	NA	65888490	65884008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
WTC11_00015037	chr11	-	3122	4	FSM	ENSG00000175592.9	ENST00000312562.7	1702	4	0	-1420	0	1420	multi-exon	FALSE	canonical	3	99	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGGGCGCGCGCCGGGGC	-65899269	True	NA	NA	False	NA	NA	NA	65900388	65890628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65893297_65894013_65894122_65896808_65897007_65900240
WTC11_00015038	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65918216_65918909
WTC11_00015039	chr11	-	1562	2	FSM	ENSG00000175573.7	ENST00000438576.3	1562	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65918219_65918909
WTC11_00015040	chr11	-	2761	7	NNC	ENSG00000175376.9	novel	2761	6	NA	NA	0	46694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.5060056810672	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGTAATGCATATGTTA	-66000046	True	NA	NA	False	NA	NA	NA	66002136	65949850	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65949872_65996545_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
WTC11_00015041	chr11	-	908	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	42.9213233719558	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66000046	True	NA	-9	True	ATTAAA	-16	NA	66002136	65998432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
WTC11_00015042	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66000076	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
WTC11_00015043	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	38.0263066836631	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	-66000086	True	NA	NA	False	NA	NA	NA	66002176	65998566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
WTC11_00015044	chr11	-	587	5	FSM	ENSG00000175376.9	ENST00000532707.5	584	5	0	-3	0	0	multi-exon	FALSE	canonical	2	13	junction_4	47.4677522113698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAACAGGTGAGGAACA	-66000046	True	NA	NA	False	NA	NA	NA	66002136	65999359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
WTC11_00015045	chr11	-	580	5	FSM	ENSG00000175376.9	ENST00000530462.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.8535713079069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAACAGGTGAGGAACA	-66000070	True	NA	NA	False	NA	NA	NA	66002160	65999359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66002039
WTC11_00015047	chr11	-	406	3	FSM	ENSG00000175376.9	ENST00000526449.1	561	3	0	155	0	-155	multi-exon	FALSE	canonical	0	0	junction_2	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGATTACTCCTGTA	-66000067	True	NA	NA	False	NA	NA	NA	66002157	66000052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66000162_66000302_66000482_66002039
WTC11_00015048	chr11	-	3301	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGTGATCTATCCAAA	-66045721	True	NA	-3	True	AGTAAA	-14	NA	66049161	66040764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66043678_66045290_66045528_66049010
WTC11_00015049	chr11	-	2380	3	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	-25	413	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	113.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTATGTCAGTCATAG	-66045746	True	NA	-1	True	AATAAA	-18	NA	66049186	66041950	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66043918_66045290_66045528_66049010
WTC11_00015054	chr11	-	1098	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	-1	0	1	multi-exon	FALSE	canonical	3	1181	junction_3	125.100775703561	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGACCCTTGTTCCT	-66275628	True	NA	-3	True	NA	NA	NA	66289143	66284578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
WTC11_00015055	chr11	-	2427	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	-1483	-1	-1483	1	multi-exon	FALSE	canonical	3	257	junction_2	452.561843533259	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGACCCTTGTTCCT	NA	False	NA	-3	True	NA	NA	NA	66290628	66284578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
WTC11_00015060	chr11	-	3947	10	FSM	ENSG00000174791.11	ENST00000311320.9	4419	10	32	440	0	-439	multi-exon	FALSE	canonical	3	15	junction_4	8.92077613851958	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	-66332516	False	NA	NA	False	NA	NA	NA	66336402	66330680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66332753_66333257_66333410_66333526_66333659_66333918_66334225_66334513_66335252_66335406_66335499_66335609_66335683_66335761_66335877_66335977_66336159_66336316
WTC11_00015062	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	111.641732981936	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-66341233	True	NA	-5	True	ATTAAA	-20	NA	66345119	66337332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
WTC11_00015067	chr11	-	750	5	FSM	ENSG00000174744.14	ENST00000525127.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_4	12.3592070943083	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGCGAGAGCCTGGGC	-66341197	True	NA	NA	False	NA	NA	NA	66345083	66340773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
WTC11_00015069	chr11	-	2011	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	-4	0	4	multi-exon	FALSE	canonical	3	316	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCGTTACTCTCCTGA	-66345605	True	NA	2	True	AATAAA	-21	NA	66347629	66345369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66346241_66346489
WTC11_00015070	chr11	-	2191	11	NIC	ENSG00000174669.12	novel	2455	12	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_9	73.8360345630777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66367632	True	NA	-34	True	NA	NA	NA	66371646	66362520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371562
WTC11_00015071	chr11	-	2538	11	NIC	ENSG00000174669.12	novel	2455	12	NA	NA	116	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	54.8872480636441	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66371911	False	NA	-34	True	NA	NA	NA	66371983	66362520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369368_66369533_66371243_66371326_66371562
WTC11_00015072	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	39.0123947246098	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66367746	True	NA	-34	True	NA	NA	NA	66371760	66362520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
WTC11_00015073	chr11	-	1609	5	FSM	ENSG00000174547.13	ENST00000310999.11	1605	5	0	-4	0	4	multi-exon	FALSE	canonical	3	1502	junction_3	117.947816851352	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGCCAATATTTGG	-66420341	True	NA	-11	True	AATAAA	-29	NA	66438848	66435070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438631
WTC11_00015074	chr11	-	1704	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	-178	1	-178	-1	multi-exon	FALSE	canonical	3	293	junction_4	606.881938683299	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGACTTCTGCCAATA	-66438681	True	NA	-16	True	AATAAA	-24	NA	66439026	66435075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
WTC11_00015075	chr11	-	1689	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	529	-9	529	4	multi-exon	FALSE	canonical	1	9	junction_4	728.260384409313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGCCAATATTTGG	-66466123	True	NA	-11	True	AATAAA	-29	NA	66466209	66435070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
WTC11_00015076	chr11	-	1876	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	-192	-762	-178	-1	multi-exon	FALSE	canonical	0	0	junction_1	790.278077641029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGACTTCTGCCAATA	-66438681	True	NA	-16	True	AATAAA	-24	NA	66439026	66435075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
WTC11_00015077	chr11	-	4800	3	FSM	ENSG00000174165.8	ENST00000310442.5	4803	3	0	3	0	-3	multi-exon	FALSE	canonical	3	107	junction_1	4.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATCATGCCTTTTTAAA	-66544542	True	NA	NA	False	AATAAA	-20	NA	66546048	66535628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66539825_66543703_66543982_66545722
WTC11_00015078	chr11	-	2021	13	FSM	ENSG00000174080.12	ENST00000310325.10	2044	13	21	2	-10	1	multi-exon	FALSE	canonical	3	34	junction_8	5.13903903684553	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGGTATAAATGCTCA	-66568112	True	NA	-1	True	AATAAA	-17	NA	66568585	66563465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
WTC11_00015079	chr11	-	2432	12	FSM	ENSG00000174080.12	ENST00000678294.1	2451	12	17	2	-10	1	multi-exon	FALSE	canonical	3	34	junction_7	5.13937964549184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGGTATAAATGCTCA	-66568112	True	NA	-1	True	AATAAA	-17	NA	66568585	66563465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
WTC11_00015081	chr11	-	2895	1	FSM	ENSG00000182791.5	ENST00000333861.5	2888	1	-31	24	-31	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAAATCTCCTATATC	NA	False	NA	NA	False	NA	NA	NA	66593094	66590199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66590200_66593100
WTC11_00015087	chr11	-	809	2	FSM	ENSG00000173914.12	ENST00000529195.2	809	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTTTGTTACAGCAAC	-66666505	False	NA	NA	False	ATTAAA	-24	NA	66668835	66665905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66666494_66668614
WTC11_00015088	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-66675547	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66677092_66677763
WTC11_00015089	chr11	-	11786	37	ISM	ENSG00000173898.15	ENST00000533211.6	11136	38	6649	1	-1327	-1	3prime_fragment	FALSE	canonical	3	21	junction_29	21.9658123815225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATGACTTTTTAAAT	-66722543	False	NA	-4	True	ATTAAA	-14	NA	66722567	66682497	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083_66721263_66721349
WTC11_00015090	chr11	-	10791	38	FSM	ENSG00000173898.15	ENST00000533211.6	11136	38	344	1	344	-1	multi-exon	FALSE	canonical	2	3	junction_37	23.3729567217485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATGACTTTTTAAAT	-66728848	False	24	-4	True	ATTAAA	-14	NA	66728872	66682497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083_66721263_66721349_66721441_66728740
WTC11_00015093	chr11	-	8085	35	FSM	ENSG00000173898.15	ENST00000529997.5	8085	35	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_28	20.7137560230228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCGCCTCTGGGTGTCTT	-66721216	False	NA	-9	True	ATTAAA	-15	NA	66721240	66685251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083
WTC11_00015095	chr11	-	4318	23	FSM	ENSG00000173599.15	ENST00000393960.7	4305	23	0	-13	0	10	multi-exon	TRUE	canonical	1	3	junction_22	25.5466272781605	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCATCGTGGCCCTGTT	-66956392	True	NA	NA	False	NA	NA	NA	66958383	66848406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66954248_66954437_66958321
WTC11_00015101	chr11	-	1818	2	FSM	ENSG00000175482.9	ENST00000533429.1	860	2	-215	-743	197	-28	multi-exon	FALSE	canonical	3	236	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCGTCTCAAAAAATAAAAA	-67348903	False	NA	NA	False	NA	NA	NA	67353293	67350804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690
WTC11_00015102	chr11	-	1139	3	ISM	ENSG00000175482.9	ENST00000530584.5	899	4	-24	0	4	0	intron_retention	FALSE	canonical	3	236	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	-67349152	True	NA	-5	True	AATAAA	-18	NA	67353542	67351547	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_67352020_67352690_67352803_67352987
WTC11_00015106	chr11	-	1483	7	FSM	ENSG00000172531.16	ENST00000532446.5	1465	7	0	-18	0	0	multi-exon	FALSE	canonical	2	104	junction_6	1139.56386637852	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67401556	False	36701	-12	True	AATAAA	-19	NA	67401577	67398182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401384
WTC11_00015107	chr11	-	1695	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	-18	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	233.504946414418	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67401583	False	36701	-12	True	AATAAA	-19	NA	67401604	67398182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
WTC11_00015109	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	217.51430348881	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365157	True	NA	-12	True	AATAAA	-19	NA	67401858	67398182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
WTC11_00015110	chr11	-	2449	6	FSM	ENSG00000172531.16	ENST00000532279.2	2430	6	0	-19	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	196.251878971897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365162	True	NA	-12	True	AATAAA	-19	NA	67401863	67398182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67400920_67401067_67401200_67401727
WTC11_00015111	chr11	-	2846	5	FSM	ENSG00000172531.16	ENST00000677322.1	2832	5	0	-14	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	199.087135445764	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365162	True	NA	-12	True	AATAAA	-19	NA	67401863	67398182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67400920_67401067_67401200_67401727
WTC11_00015112	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	3014	junction_4	124.927178788284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-67365162	True	NA	-38	True	NA	NA	NA	67401863	67398208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
WTC11_00015117	chr11	-	4412	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	-1	0	1	multi-exon	FALSE	canonical	3	472	junction_5	26.2800304413827	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTCCTACAGAGAC	-67435435	True	NA	-1	True	AATAAA	-18	NA	67443476	67435508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
WTC11_00015118	chr11	-	2296	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	-365	0	365	multi-exon	FALSE	canonical	3	9	junction_11	144.944731558658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTCGCTCGACACAGCC	NA	False	NA	NA	False	NA	NA	NA	67443821	67437682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
WTC11_00015124	chr11	-	3477	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	74	0	-74	multi-exon	FALSE	canonical	3	531	junction_5	68.9091592041451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAATTCAAATTTCC	-67464519	True	NA	NA	False	CATAAA	-3	NA	67469251	67461783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
WTC11_00015125	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	230.140114326517	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464507	True	NA	-8	True	AATAAA	-22	NA	67469239	67464352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
WTC11_00015128	chr11	-	899	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	238.02217450388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAATTGCTCTCCTCCT	-67464501	True	NA	-10	True	AATAAA	-20	NA	67469233	67464354	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468016_67468093_67469018
WTC11_00015129	chr11	-	841	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_5	197.189981715322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-67464518	True	NA	-47	True	NA	NA	NA	67469250	67464391	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
WTC11_00015130	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	242.461213392988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-67464518	True	NA	-47	True	NA	NA	NA	67469250	67464391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
WTC11_00015138	chr11	-	4201	23	FSM	ENSG00000110697.13	ENST00000534749.5	4189	23	0	-12	0	12	multi-exon	FALSE	canonical	3	134	junction_10	23.913065691036	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCATCACAGGGCA	-67503119	False	NA	0	True	AATAAA	-29	NA	67504369	67491755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102
WTC11_00015139	chr11	-	4225	24	FSM	ENSG00000110697.13	ENST00000356404.8	4217	24	0	-8	0	8	multi-exon	FALSE	canonical	3	134	junction_10	23.5939180269809	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGCCTGGCATCACAG	-67504113	False	5894	-4	True	AATAAA	-25	NA	67505363	67491759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
WTC11_00015140	chr11	-	4222	24	FSM	ENSG00000110697.13	ENST00000436757.6	4216	24	2	-8	0	8	multi-exon	FALSE	canonical	3	57	junction_10	35.344536987999	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGCCTGGCATCACAG	-67504113	False	5894	-4	True	AATAAA	-25	NA	67505363	67491759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496346_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
WTC11_00015144	chr11	-	571	2	FSM	ENSG00000110697.13	ENST00000529203.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCGGCACAGACGGGGCC	-67501378	False	NA	NA	False	NA	NA	NA	67502628	67501967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67502414_67502503
WTC11_00015148	chr11	-	1692	3	FSM	ENSG00000167797.8	ENST00000525402.5	1692	3	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_2	31.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGTGCTCTCAGCTCT	-67507399	True	NA	-28	True	AATAAA	-10	NA	67508649	67506511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507013_67507364_67507498_67507591
WTC11_00015149	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	356.133245975279	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	-67502264	True	NA	-57	True	NA	NA	NA	67508158	67506619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
WTC11_00015150	chr11	-	1052	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	15	-433	0	0	multi-exon	FALSE	canonical	3	750	junction_2	12.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	-67502182	True	NA	-57	True	NA	NA	NA	67508076	67506619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507498_67507591_67507690_67508000
WTC11_00015152	chr11	-	2553	1	FSM	ENSG00000231793.6	ENST00000639052.1	2548	1	-7	2	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGACCCTGTCCTTTC	-67614737	False	NA	-2	True	AATAAA	-16	NA	67615205	67612652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67612700_67615200
WTC11_00015153	chr11	-	579	2	FSM	ENSG00000231793.6	ENST00000638470.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGCAGGCCTGGTGGCA	-67615333	False	NA	NA	False	NA	NA	NA	67615801	67614857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67615398_67615762
WTC11_00015154	chr11	-	1468	2	FSM	ENSG00000167799.10	ENST00000534054.1	1465	2	0	-3	0	2	multi-exon	FALSE	canonical	3	56	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGCTTCTGCTGTACT	-67629391	True	NA	1	True	AATAAA	-20	NA	67629921	67627935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67628401_67628918
WTC11_00015155	chr11	-	949	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	-171	-33	-171	33	multi-exon	FALSE	canonical	3	39	junction_3	8.80656320908194	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCAGACCACTCCAGG	NA	False	NA	32	True	NA	NA	NA	67630108	67627904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
WTC11_00015156	chr11	-	985	3	FSM	ENSG00000167799.10	ENST00000301490.8	809	3	-172	-4	-165	4	multi-exon	FALSE	canonical	3	39	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTCTGCTGTACTGG	NA	False	NA	3	True	AATAAA	-22	NA	67630102	67627933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67628401_67628918_67629052_67629717
WTC11_00015157	chr11	-	393	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	-30	-76	-30	76	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCAAAGGTGAGGTT	NA	False	NA	NA	False	AATAAA	-42	NA	67683088	67682695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67682700_67683100
WTC11_00015158	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	-67805217	True	NA	NA	False	NA	NA	NA	67805322	67791647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67793294_67803001_67803065_67805217
WTC11_00015159	chr11	-	2086	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	-31	-198	-29	79	multi-exon	FALSE	canonical	3	17	junction_2	17.3781471969828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCCAGAAGTTCCCTT	-67805260	True	NA	NA	False	AAGAAA	-38	NA	67805365	67791568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
WTC11_00015161	chr11	-	2294	11	FSM	ENSG00000110057.8	ENST00000227471.7	2294	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	36.1586780731818	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGTCCCAGGCCGCG	-68002219	True	NA	0	True	AATAAA	-21	NA	68004097	67991099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67991858_67993675_67993795_67995610_67995885_67996601_67996785_67997674_67997800_67998358_67998453_67999172_67999306_67999518_67999681_68003021_68003176_68003656_68003799_68003947
WTC11_00015162	chr11	-	1275	5	FSM	ENSG00000110057.8	ENST00000533424.5	1275	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	12.3085336250912	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCCTTGTTGGGGGTT	-68002178	True	NA	NA	False	NA	NA	NA	68004056	67998358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67998453_67999172_67999306_67999518_67999681_68003021_68003799_68003947
WTC11_00015167	chr11	-	1755	11	FSM	ENSG00000110721.12	ENST00000356135.9	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	161.754752634969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTCTTGTTTACGAT	-68116521	True	NA	-7	True	ATTAAA	-16	NA	68121444	68053819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68097018_68097131_68120827
WTC11_00015172	chr11	-	5718	11	FSM	ENSG00000110066.15	ENST00000304363.9	5718	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	98.6101414662812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCGGTGTTCACTGTA	-68211384	True	NA	NA	False	AATAAA	-18	NA	68213296	68154862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
WTC11_00015173	chr11	-	5877	11	NIC	ENSG00000110066.15	novel	5718	11	NA	NA	0	-34	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	84.7466813509532	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCATTTTAATAAATTC	-68213816	False	NA	NA	False	AAAACA	-42	NA	68213828	68154896	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
WTC11_00015174	chr11	-	2816	10	FSM	ENSG00000110066.15	ENST00000441488.6	2816	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	124.170134179771	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGCATACTATTGTA	-68190051	True	NA	NA	False	NA	NA	NA	68190081	68157579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171297_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916
WTC11_00015175	chr11	-	2666	10	FSM	ENSG00000110066.15	ENST00000401547.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_9	66.5701152688921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68211374	True	NA	0	True	AATAAA	-19	NA	68213286	68165714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
WTC11_00015176	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_9	28.4518219599291	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68213816	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
WTC11_00015177	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	88.7380414478481	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	-68213583	False	NA	-4	True	AATAAA	-15	NA	68213595	68165718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
WTC11_00015181	chr11	-	2115	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	-25	-19	3	19	multi-exon	FALSE	canonical	3	293	junction_1	6.94422221866655	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTGGGGAGCCTTGC	-68267159	True	NA	-5	True	ATTAAA	-37	NA	68271998	68261318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
WTC11_00015183	chr11	-	1004	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	-24	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	114.281450813332	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-68267132	True	NA	-151	True	NA	NA	NA	68271971	68261608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
WTC11_00015184	chr11	-	940	4	FSM	ENSG00000171067.11	ENST00000530166.5	941	4	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_1	140.952316602302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCACTACCGCCACTGGG	-68267161	True	NA	NA	False	NA	NA	NA	68272000	68262462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68262919_68263572_68263715_68268053_68268252_68271856
WTC11_00015185	chr11	-	610	3	FSM	ENSG00000171067.11	ENST00000529590.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	133.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGGGCTGCCT	-68267132	True	NA	1	True	AATAAA	-34	NA	68271971	68267100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68267398_68268053_68268252_68271856
WTC11_00015188	chr11	-	2548	10	FSM	ENSG00000132749.11	ENST00000255087.10	2535	10	0	-13	0	13	multi-exon	FALSE	canonical	3	11	junction_6	49.3801079558196	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTAACTGAAAATGTGT	-68750056	True	NA	-5	True	AATAAA	-32	NA	68751520	68707426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
WTC11_00015189	chr11	-	2891	4	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	394	12	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	49.4435705291059	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTCCTAAAGATGA	-68751055	False	NA	11	True	AATAAA	-28	NA	68751066	68736119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189
WTC11_00015190	chr11	-	2553	5	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	54.0046294311886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-68749996	True	NA	-1	True	AATAAA	-16	NA	68751460	68736131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189_68750700_68751419
WTC11_00015191	chr11	-	1235	6	FSM	ENSG00000132749.11	ENST00000544963.1	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	65.0273788492201	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCGCTGTCCTATGTTG	-68749996	True	NA	NA	False	NA	NA	NA	68751460	68738461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
WTC11_00015192	chr11	-	6520	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	-204	-5673	-204	-3011	multi-exon	FALSE	canonical	3	190	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGATTGGGGGGATGGG	-68750804	False	NA	NA	False	NA	NA	NA	68750815	68741472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68747367_68750189
WTC11_00015193	chr11	-	5297	19	FSM	ENSG00000110090.13	ENST00000265641.10	5238	19	-56	-3	-41	3	multi-exon	FALSE	canonical	2	7	junction_10	3.74989711793027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTGTCTCTTTTGTT	-68841933	False	NA	2	True	AATAAA	-27	NA	68841972	68754879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639_68780746_68781770_68781960_68784814_68785011_68793314_68793403_68794803_68794912_68796855_68796934_68799217_68799356_68803999_68804102_68807466_68807639_68812436_68812577_68815333_68815488_68841774
WTC11_00015194	chr11	-	662	7	FSM	ENSG00000197345.13	ENST00000450904.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	479.976185751844	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTCTGTGTTCTGGT	-68890165	True	NA	-5	True	AATAAA	-20	NA	68903786	68891275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
WTC11_00015195	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	FALSE	canonical	3	1442	junction_2	86.9725371725019	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-68890211	True	NA	-7	True	AATAAA	-18	NA	68903832	68891277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
WTC11_00015196	chr11	-	768	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	-4	0	0	multi-exon	FALSE	canonical	3	73	junction_2	553.075165677224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	-68890206	True	NA	-8	True	AATAAA	-17	NA	68903827	68891278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
WTC11_00015198	chr11	-	654	5	FSM	ENSG00000197345.13	ENST00000544567.5	654	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	716.425327581319	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGTAAGTTAGAGAAAG	-68890193	True	NA	17	True	NA	NA	NA	68903814	68892894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68892994_68893402_68893456_68896514_68896839_68897926_68898013_68903722
WTC11_00015201	chr11	-	3774	3	FSM	ENSG00000149716.13	ENST00000544096.5	3776	3	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTTGGGACCATTTA	-69671302	False	NA	-5	True	AGTAAA	-16	NA	69673384	69665567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69667588_69667894_69668013_69671748
WTC11_00015202	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6543508897528	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673271	True	NA	0	True	AGTAAA	-21	NA	69675353	69665562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
WTC11_00015204	chr11	-	829	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	-12	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.2565175405668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGAGGAACAGATGTGTG	-69673240	True	NA	NA	False	NA	NA	NA	69675322	69667493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
WTC11_00015209	chr11	-	1828	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	-7	0	7	multi-exon	FALSE	canonical	3	224	junction_1	5.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTCTATTATCCGCCT	-69703926	False	NA	0	True	ATTAAA	-24	NA	69704022	69698230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69699577_69703260_69703365_69703644
WTC11_00015210	chr11	-	3171	3	FSM	ENSG00000075388.4	ENST00000168712.3	3165	3	0	-6	0	6	multi-exon	FALSE	canonical	3	22	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGTTCCCTCCCCCTG	-69775204	True	NA	-14	True	ATTAAA	-31	NA	69775341	69771015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69773486_69774023_69774128_69774744
WTC11_00015211	chr11	-	2530	4	NNC	ENSG00000075388.4	novel	3165	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.5236418500672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCAAGACCTGGTTCCC	-69775099	False	NA	-22	True	ATTAAA	-23	NA	69775164	69771023	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_69772752_69773207_69773486_69774023_69774128_69774744
WTC11_00015213	chr11	-	11118	23	NIC	ENSG00000162105.21	novel	10830	26	NA	NA	-336	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_22	7.49545316720865	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGTTATCAATTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	71252913	70467850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_70473440_70485313_70487721_70490275_70490388_70492334_70492466_70502205_70502287_70502795_70502932_70659827_70659953_70661595_70661679_70698687_70698764_70798442_70798557_70807001_70807172_70820363_70820683_70896500_70896568_71056480_71056559_71075158_71075276_71092421_71092590_71094536_71094689_71109940_71110050_71113292_71113365_71118828_71119033_71147119_71147339_71224696_71224797_71252424
WTC11_00015214	chr11	-	892	6	FSM	ENSG00000162105.21	ENST00000449116.6	939	6	0	47	0	-47	multi-exon	FALSE	canonical	3	29	junction_3	3.63318042491699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGGAATTCTGAGCCCT	-70661617	False	223	NA	False	NA	NA	NA	70661840	70490213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70490388_70492334_70492466_70502205_70502287_70502795_70502932_70659827_70659953_70661595
WTC11_00015215	chr11	-	863	1	FSM	ENSG00000280089.1	ENST00000624943.1	464	1	17	-416	17	416	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCACCTGACTAGCCTT	-70705956	False	NA	NA	False	NA	NA	NA	70706051	70705188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70705200_70706100
WTC11_00015218	chr11	-	2627	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	0	0	0	multi-exon	TRUE	canonical	3	830	junction_3	56.4905965626139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	-71433309	True	NA	NA	False	ATTAAA	-19	NA	71448393	71434410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
WTC11_00015221	chr11	-	2666	9	FSM	ENSG00000172893.18	ENST00000683714.1	2645	9	1	-22	1	0	multi-exon	FALSE	canonical	2	11	junction_1	306.308157743146	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448434	71434420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435840_71437803_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
WTC11_00015222	chr11	-	996	3	FSM	ENSG00000172893.18	ENST00000525137.1	996	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCCAGCTCCAACTCGA	-71423992	False	NA	NA	False	GGGGCT	-36	NA	71439076	71435307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435974_71437811_71437944_71438878
WTC11_00015230	chr11	-	2277	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	-1	0	1	multi-exon	FALSE	canonical	3	326	junction_6	29.0688837074973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGTTGACTTGATCGG	-72007894	False	NA	-2	True	AATAAA	-21	NA	72007916	72002862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
WTC11_00015231	chr11	-	7002	24	FSM	ENSG00000137497.19	ENST00000620566.4	7012	24	12	-2	12	1	multi-exon	TRUE	canonical	3	195	junction_20	76.8436903136542	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGTTGACTTGATCGG	-72035913	False	NA	-2	True	AATAAA	-21	NA	72035975	72002862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901
WTC11_00015234	chr11	-	7150	26	NIC	ENSG00000137497.19	novel	7198	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_25	82.9284028545106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	-72075774	True	NA	-3	True	AATAAA	-20	NA	72080536	72002863	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080457
WTC11_00015235	chr11	-	2796	7	FSM	ENSG00000137497.19	ENST00000545721.1	2796	7	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	11.0704812702771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCGAGTGTGCCCCCCA	-72013296	False	23	NA	False	NA	NA	NA	72013312	72005285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72005370_72006034_72006264_72007188_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894
WTC11_00015247	chr11	-	1091	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	-2	0	2	multi-exon	FALSE	canonical	3	942	junction_1	86.1945473913518	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTCTGGCCCCTCTG	-72092070	True	NA	-3	True	GATAAA	-20	NA	72103297	72097289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
WTC11_00015248	chr11	-	1660	4	FSM	ENSG00000149357.10	ENST00000538404.1	1346	4	-165	-149	-104	93	multi-exon	FALSE	canonical	3	1115	junction_3	17.3781471969828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAAGATGAACCCAAG	-72092174	True	NA	88	True	NA	NA	NA	72103401	72097198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72098416_72098780_72098859_72099110_72099257_72103182
WTC11_00015249	chr11	-	1423	4	FSM	ENSG00000110200.9	ENST00000502597.2	1481	4	0	58	0	-58	multi-exon	FALSE	canonical	0	0	junction_1	473.315492621524	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCCTGGCACCTAGCAC	-72105491	True	NA	NA	False	NA	NA	NA	72112704	72106435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72107606_72110087_72110226_72110543_72110604_72112649
WTC11_00015251	chr11	-	711	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	-7	0	0	multi-exon	FALSE	canonical	3	93	junction_4	382.162514514441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105473	True	NA	0	True	AATAAA	-25	NA	72112686	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
WTC11_00015252	chr11	-	876	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	-4	0	0	multi-exon	FALSE	canonical	3	18	junction_1	360.887794196479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105541	True	NA	0	True	AATAAA	-25	NA	72112754	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
WTC11_00015253	chr11	-	883	6	FSM	ENSG00000110200.9	ENST00000543587.5	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	385.543564334823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105553	True	NA	0	True	AATAAA	-25	NA	72112766	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
WTC11_00015254	chr11	-	874	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	-7	0	0	multi-exon	FALSE	canonical	3	289	junction_4	270.146330717261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105556	True	NA	0	True	AATAAA	-25	NA	72112769	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
WTC11_00015255	chr11	-	854	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	-6	0	0	multi-exon	FALSE	canonical	3	86	junction_4	345.532863849446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105561	True	NA	0	True	AATAAA	-25	NA	72112774	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
WTC11_00015256	chr11	-	890	6	FSM	ENSG00000110200.9	ENST00000227618.9	801	6	-85	-4	0	0	multi-exon	FALSE	canonical	3	497	junction_4	197.737199332852	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-72105567	True	NA	0	True	AATAAA	-25	NA	72112780	72109582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
WTC11_00015261	chr11	-	1699	3	FSM	ENSG00000165462.5	ENST00000298231.5	1699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGCCGCAACCCTTACGA	-72244110	True	NA	1	True	AATAAA	-20	NA	72244176	72239076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72240199_72241101_72241290_72243787
WTC11_00015262	chr11	-	9960	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	3	0	-3	multi-exon	FALSE	canonical	3	81	junction_7	16.4376262141331	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTAATTGACAGCACTT	-72432274	True	NA	NA	False	AATAAA	-12	NA	72434531	72285497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
WTC11_00015268	chr11	-	961	5	FSM	ENSG00000186635.15	ENST00000544721.5	773	5	351	-539	0	0	multi-exon	FALSE	canonical	3	372	junction_1	21.4053147605916	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	-72688521	False	NA	-5	True	TATAAA	-23	NA	72688537	72685068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454
WTC11_00015270	chr11	-	5250	35	FSM	ENSG00000186635.15	ENST00000393609.8	5156	35	0	-94	0	94	multi-exon	FALSE	canonical	3	60	junction_5	81.6016836535038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTGAGAACCTAGGCC	-72745000	True	NA	89	True	NA	NA	NA	72752408	72684974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
WTC11_00015271	chr11	-	5040	33	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_32	61.1998519197555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	-72745000	True	NA	-5	True	TATAAA	-23	NA	72752408	72685068	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72752327
WTC11_00015275	chr11	-	1183	6	NIC	ENSG00000214530.10	novel	2330	7	NA	NA	28	0	intron_retention	FALSE	canonical	3	28	junction_2	49.0632245169434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTCATCACTGTGCCT	-72781787	False	NA	-17	True	AATAAA	-17	NA	72781807	72754728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72755143_72755700_72755754_72758529_72758634_72759233_72759382_72780974_72781295_72781663
WTC11_00015277	chr11	-	1098	7	FSM	ENSG00000214530.10	ENST00000537947.5	1100	7	2	0	2	0	multi-exon	FALSE	canonical	3	126	junction_5	15.1620872207255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCAGCATGCGGACTCA	-72780969	True	NA	NA	False	NA	NA	NA	72781891	72755015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72781663
WTC11_00015280	chr11	-	932	5	FSM	ENSG00000137478.15	ENST00000409263.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.8731286586367	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATCTTTCTTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	72843513	72838398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72843150_72843329_72843448
WTC11_00015281	chr11	-	7188	8	FSM	ENSG00000054965.11	ENST00000356467.5	7192	8	0	4	0	-4	multi-exon	FALSE	canonical	1	3	junction_3	3.31354671564091	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGGTGCCTGCTGCT	-73596082	True	NA	-5	True	AATAAA	-15	NA	73598112	73400490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73430689_73430771_73468404_73468493_73597922
WTC11_00015282	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	113.069962087774	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753691	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
WTC11_00015283	chr11	-	3327	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	-1	0	1	multi-exon	FALSE	canonical	3	241	junction_5	155.462181240064	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGACCTGGTTTCCCATT	-73753628	True	NA	NA	False	AATAAA	-18	NA	73761074	73675636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
WTC11_00015284	chr11	-	926	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	-4	0	2	multi-exon	FALSE	canonical	3	37	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCTTTTGTTTTTTT	-73876598	False	NA	1	True	AATAAA	-24	NA	73876674	73872664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73873395_73876478
WTC11_00015285	chr11	-	820	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	-2	0	2	multi-exon	FALSE	canonical	3	632	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCTTTTGTTTTTTT	-73862032	True	NA	1	True	AATAAA	-24	NA	73876846	73872664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73873395_73876756
WTC11_00015286	chr11	-	3901	2	FSM	ENSG00000181924.7	ENST00000537581.1	566	2	58	-3393	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTAATTAGTGCCTTTC	-73862029	True	NA	-26	True	ATTAAA	-24	NA	73876843	73872761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73876576_73876756
WTC11_00015288	chr11	-	1413	7	FSM	ENSG00000175567.11	ENST00000536983.5	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	121.494512907648	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCACTTGTCATCCATA	-73980543	True	NA	-69	True	NA	NA	NA	73982830	73974708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73975122_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
WTC11_00015292	chr11	-	3175	8	FSM	ENSG00000168014.18	ENST00000680718.1	3216	8	45	-4	0	4	multi-exon	FALSE	canonical	1	1	junction_1	17.2603119133734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTACTGAAAACACAAAAAAA	-74168509	True	NA	NA	False	NA	NA	NA	74170957	74128049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74129843_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
WTC11_00015295	chr11	-	936	4	FSM	ENSG00000168014.18	ENST00000541922.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.8325958557674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTTCTTATATA	-74168429	True	NA	NA	False	ATTAAA	-23	NA	74170877	74158326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74158695_74161398_74161557_74168343_74168614_74170737
WTC11_00015297	chr11	-	8482	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	-5	0	5	multi-exon	TRUE	canonical	3	46	junction_7	12.934976206683	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTGTAATTTTTATT	-74396499	True	NA	0	True	AATAAA	-22	NA	74398433	74330310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
WTC11_00015298	chr11	-	3026	3	FSM	ENSG00000175538.11	ENST00000310128.9	3064	3	-172	210	8	-210	multi-exon	FALSE	canonical	2	5	junction_2	2	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGCTGCCATATGCAG	NA	False	NA	11	True	AATAAA	-41	NA	74467721	74455050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74457604_74461954_74462104_74467397
WTC11_00015301	chr11	-	528	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	-80	-49	-80	49	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCAGTTCTCAACCTGG	-74746161	True	NA	NA	False	AATAAA	-41	NA	74746194	74745666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74745700_74746200
WTC11_00015302	chr11	-	2985	4	FSM	ENSG00000166435.16	ENST00000431210.2	2995	4	12	-2	12	0	multi-exon	FALSE	canonical	1	1	junction_3	6.18241233033047	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGGGTGCCACATGCA	NA	False	NA	NA	False	AATAAA	-20	NA	74864102	74842967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74844284_74845072_74845272_74848114_74848463_74862980
WTC11_00015303	chr11	-	2528	15	NIC	ENSG00000166435.16	novel	5681	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	7.45872998983235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTGGGTGCCACATGC	-74948143	True	NA	NA	False	AATAAA	-19	NA	74949090	74842968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_74843454_74843853_74843960_74844167_74844284_74845072_74845272_74848114_74848463_74851087_74851204_74851988_74852083_74859157_74859284_74862980_74863022_74906238_74906457_74907144_74907274_74921213_74921348_74936883_74937069_74945017_74945086_74948927
WTC11_00015305	chr11	-	8107	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	-636	-119	-592	119	multi-exon	FALSE	canonical	3	50	junction_3	51.4321127528534	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGGCCCCAGCTC	-75352278	False	NA	NA	False	GGGGCT	-27	NA	75352297	75260002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
WTC11_00015306	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	25.2881354773018	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	-75347885	True	NA	2	True	NA	NA	NA	75351705	75265598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
WTC11_00015309	chr11	-	3539	17	FSM	ENSG00000158555.15	ENST00000336898.8	3561	17	22	0	22	0	multi-exon	FALSE	canonical	2	8	junction_15	5.10973335899242	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	-75525774	True	NA	-4	True	ATTAAA	-14	NA	75525919	75434639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75490236_75490321_75525209
WTC11_00015310	chr11	-	358	2	FSM	ENSG00000158555.15	ENST00000531561.1	449	2	91	0	91	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGAACCTGCGCTACAC	NA	False	NA	NA	False	NA	NA	NA	75442606	75441689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75441804_75442362
WTC11_00015312	chr11	-	825	5	FSM	ENSG00000158555.15	ENST00000532435.5	825	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGGGCAGTGGGTG	-75525279	False	NA	NA	False	NA	NA	NA	75525424	75462785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75525209
WTC11_00015314	chr11	-	4318	3	FSM	ENSG00000171533.12	ENST00000434603.2	4329	3	0	11	0	-11	multi-exon	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAACACCACTTTCTTGA	-75668421	False	NA	-10	True	AATAAA	-8	NA	75668434	75602870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75606005_75608108_75608323_75667464
WTC11_00015315	chr11	-	1790	5	FSM	ENSG00000085741.14	ENST00000322563.8	1900	5	7	103	7	-103	multi-exon	FALSE	canonical	1	1	junction_1	0.82915619758885	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTGAGTGAGCCCCAG	-76206480	True	NA	NA	False	TTTAAA	-29	NA	76206495	76186427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76187240_76191563_76191857_76194566_76194845_76196482_76196719_76206324
WTC11_00015318	chr11	-	783	2	FSM	ENSG00000255135.5	ENST00000663082.2	786	2	0	3	0	1	multi-exon	FALSE	canonical	3	26	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCCTTTGCTGGATTT	-76442164	True	NA	NA	False	AATAAA	-26	NA	76444680	76441332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76441640_76444204
WTC11_00015323	chr11	-	3893	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	34	-468	0	468	multi-exon	FALSE	canonical	3	436	junction_14	136.808838030536	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTGTGCCTGTTAT	-77474046	False	NA	NA	False	AATAAA	-17	NA	77474060	77321548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
WTC11_00015325	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	280.211221918197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77474046	False	NA	10	True	NA	NA	NA	77474060	77322947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
WTC11_00015334	chr11	-	11255	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	-13	0	13	multi-exon	FALSE	canonical	3	115	junction_10	14.0658767550725	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGCAAACTTAGCTT	-77817905	True	NA	1	True	AATAAA	-28	NA	77820722	77659995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
WTC11_00015335	chr11	-	11517	16	NIC	ENSG00000048649.14	novel	11242	16	NA	NA	-127	10	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	32.1443964358055	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTTTGCAAACTTAG	-77820277	True	NA	-2	True	AATAAA	-25	NA	77820996	77659998	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700729_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
WTC11_00015336	chr11	-	604	4	FSM	ENSG00000048649.14	ENST00000440064.2	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	61.5304802516606	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	-77819987	False	NA	-38	True	NA	NA	NA	77820706	77725572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77725700_77740730_77740937_77764597_77764690_77820527
WTC11_00015337	chr11	-	462	1	FSM	ENSG00000227376.1	ENST00000435241.1	552	1	-15	105	-15	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	4533	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCATGTGACCAACTT	-77735027	False	NA	NA	False	NA	NA	NA	77735041	77734579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77734600_77735000
WTC11_00015338	chr11	-	2994	2	FSM	ENSG00000048649.14	ENST00000467567.1	2982	2	0	-12	0	12	multi-exon	FALSE	canonical	3	139	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	-77820150	False	719	NA	False	NA	NA	NA	77820869	77762037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77764690_77820527
WTC11_00015339	chr11	-	1023	2	NNC	ENSG00000048649.14	novel	520	2	NA	NA	-127	199	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTGTAAGATATTCTG	-77820277	True	NA	0	True	AATAAA	-19	NA	77820996	77813154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_77813709_77820527
WTC11_00015341	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	16.7179445333895	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	-77991812	True	NA	-2	True	AATAAA	-17	NA	77994668	77878719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
WTC11_00015342	chr11	-	880	3	FSM	ENSG00000149262.17	ENST00000527522.1	956	3	0	76	0	-76	multi-exon	FALSE	canonical	2	2	junction_1	86	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCTCCACCAGATTC	-77991814	True	NA	-82	True	NA	NA	NA	77994670	77987091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77987699_77991107_77991300_77994589
WTC11_00015343	chr11	-	1674	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	-1	0	1	multi-exon	FALSE	canonical	3	198	junction_1	0	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGTTTTGGTTCTGCTT	-78020998	True	NA	-4	True	AATAAA	-16	NA	78023276	78015713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78017271_78023159
WTC11_00015344	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3593	junction_1	228.5	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-78041749	True	NA	0	True	AATAAA	-19	NA	78079862	78068296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78070037_78072997_78073142_78079578
WTC11_00015346	chr11	-	736	3	FSM	ENSG00000159063.14	ENST00000531213.5	517	3	86	-305	86	291	multi-exon	FALSE	canonical	3	809	junction_1	14.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTGAGGATATAAAGCAT	-78104452	False	NA	NA	False	NA	NA	NA	78104463	78100640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355
WTC11_00015348	chr11	-	1609	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_7	298.22782119268	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCATGGGAAATTAAC	-78133917	True	NA	2	True	AATAAA	-28	NA	78139619	78100931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
WTC11_00015351	chr11	-	2191	12	FSM	ENSG00000159063.14	ENST00000679581.1	2301	12	110	0	110	0	multi-exon	FALSE	canonical	0	0	junction_7	307.788405368589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-12	True	AATAAA	-14	NA	78128157	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357
WTC11_00015352	chr11	-	2053	13	FSM	ENSG00000159063.14	ENST00000530910.6	2053	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	294.236535611893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133556	False	NA	-12	True	AATAAA	-14	NA	78139258	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
WTC11_00015355	chr11	-	2387	13	FSM	ENSG00000159063.14	ENST00000681351.1	2387	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	341.239977467796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133924	True	NA	-12	True	AATAAA	-14	NA	78139626	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
WTC11_00015356	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000299626.10	1637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	228.905184155653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133924	True	NA	-12	True	AATAAA	-14	NA	78139626	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
WTC11_00015357	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.512509013489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133942	True	NA	-12	True	AATAAA	-14	NA	78139644	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
WTC11_00015359	chr11	-	1678	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_8	334.172137904223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133890	True	NA	-12	True	AATAAA	-14	NA	78139592	78100945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
WTC11_00015361	chr11	-	1337	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.348437259812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	-78133886	True	NA	-13	True	AATAAA	-13	NA	78139588	78100946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
WTC11_00015368	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	291.220934434771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-78133924	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
WTC11_00015369	chr11	-	6110	10	FSM	ENSG00000033327.13	ENST00000361507.5	6110	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.69517536629242	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCGTGTCCATCTT	-78417277	True	NA	-2	True	AATAAA	-25	NA	78417820	78215292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78219416_78220318_78220445_78221676_78221780_78222104_78222196_78223411_78223677_78225107_78225203_78226464_78227052_78250156_78250401_78280600_78280902_78417645
WTC11_00015370	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_13	64.1241399587066	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-78569008	True	NA	-17	True	AATAAA	-21	NA	78574864	78435967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
WTC11_00015371	chr11	-	861	10	FSM	ENSG00000137513.10	ENST00000525345.5	861	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_7	185.180392530575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTTGACAATATCAAAGA	-78560411	False	NA	NA	False	NA	NA	NA	78566267	78436732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78528841_78528937_78559538_78559620_78566131
WTC11_00015376	chr11	-	7549	1	FSM	ENSG00000137509.12	ENST00000623464.1	7072	1	846	-1323	846	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	-82830567	False	NA	-115	True	AATATA	-37	NA	82830592	82823043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82823000_82830600
WTC11_00015378	chr11	-	315	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	234	0	9	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	-83193128	True	NA	1	True	NA	NA	NA	83193560	83191028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83191169_83192735_83192817_83193466
WTC11_00015379	chr11	-	424	1	FSM	ENSG00000247137.9	ENST00000624533.1	2295	1	349	1522	-35	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCACTGGCTCAGTCGG	-83192419	False	NA	NA	False	NA	NA	NA	83192851	83192427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83192400_83192900
WTC11_00015382	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_8	199.014721503209	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83285680	True	NA	-25	True	TATAAA	-22	NA	83286351	83261455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
WTC11_00015383	chr11	-	1992	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	-6	0	0	multi-exon	FALSE	canonical	3	127	junction_8	245.374076666628	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83280072	True	NA	-25	True	TATAAA	-22	NA	83285998	83261455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
WTC11_00015387	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	253.751123451821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	-83285539	False	NA	-21	True	ACTAAA	-27	NA	83286210	83261756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
WTC11_00015391	chr11	-	787	9	FSM	ENSG00000137500.10	ENST00000527025.5	777	9	0	-10	0	0	multi-exon	FALSE	canonical	3	34	junction_8	333.53401250847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGACAATTCGTTATCT	-83280064	True	NA	NA	False	AAAACA	-19	NA	83285990	83265889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126_83285212_83285872
WTC11_00015396	chr11	-	496	5	FSM	ENSG00000150672.18	ENST00000457267.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.280442597476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGCCAAGAAAACCTAT	NA	False	NA	NA	False	AATACA	-44	NA	83484213	83462067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83462094_83466707_83466818_83469200_83469374_83471625_83471728_83484128
WTC11_00015397	chr11	-	823	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	-257	0	257	multi-exon	FALSE	canonical	3	7	junction_1	8.72854512504805	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAAAGTTTCTACTACC	-83724897	False	NA	NA	False	CATAAA	-38	NA	83724956	83485897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
WTC11_00015399	chr11	-	301	4	FSM	ENSG00000150672.18	ENST00000527466.1	580	4	279	0	279	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATGACCCTGGCATAT	-84437511	False	NA	NA	False	NA	NA	NA	84437530	84098994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_84099048_84163460_84163512_84251237_84251292_84437387
WTC11_00015400	chr11	-	3469	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	464	-2502	0	91	multi-exon	FALSE	canonical	3	107	junction_1	64.3963422011599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATGTTTTTCTTTAA	-85656453	False	7736	NA	False	NA	NA	NA	85664189	85657650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
WTC11_00015401	chr11	-	7452	1	FSM	ENSG00000137504.15	ENST00000527447.2	7140	1	27	-339	0	91	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATGTTTTTCTTTAA	-85657366	True	NA	NA	False	NA	NA	NA	85665102	85657650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85657600_85665100
WTC11_00015403	chr11	-	7114	2	NIC	ENSG00000137504.15	novel	2850	4	NA	NA	0	-34	intron_retention	FALSE	canonical	3	222	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATAAGTTTGGTAGA	-85657366	True	NA	45	True	NA	NA	NA	85665102	85657775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85663602_85663814
WTC11_00015405	chr11	-	5580	2	FSM	ENSG00000137504.15	ENST00000490820.2	4329	2	913	-2164	0	198	multi-exon	FALSE	canonical	3	258	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTGGAAGTAATAATT	-85656453	False	7736	NA	False	NA	NA	NA	85664189	85657543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85662458_85663523
WTC11_00015406	chr11	-	4256	3	FSM	ENSG00000137504.15	ENST00000528561.5	1099	3	-998	-2159	0	0	multi-exon	FALSE	canonical	3	107	junction_1	75.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATATATATTTTTCTGT	-85657366	True	NA	-6	True	AATAAA	-26	NA	85665102	85657989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85660598_85662388_85662458_85663523
WTC11_00015410	chr11	-	2048	8	ISM	ENSG00000137501.18	ENST00000525702.5	2727	9	3908	-49	3908	-10	3prime_fragment	FALSE	canonical	3	11	junction_5	3.83325938999964	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCTAAACATCTAAATT	-85711156	False	NA	40	True	AATAAA	-10	NA	85711229	85694238	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514_85700594_85704857_85705029_85707428_85707532_85709330_85709501_85711112
WTC11_00015411	chr11	-	942	4	FSM	ENSG00000137501.18	ENST00000531496.5	942	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGGACCTTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	85700623	85694813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514
WTC11_00015412	chr11	-	556	4	FSM	ENSG00000137501.18	ENST00000529662.1	783	4	227	0	227	0	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTTGCTACATTTTT	NA	False	NA	NA	False	NA	NA	NA	85705028	85696182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85696389_85697978_85698079_85700514_85700594_85704857
WTC11_00015413	chr11	-	2909	11	NIC	ENSG00000073921.18	novel	2261	19	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	55.2072459012402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTACTTTTATAAGT	-86001128	True	NA	-8	True	ATTAAA	-20	NA	86001141	85957170	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034
WTC11_00015414	chr11	-	4138	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	-4	0	4	multi-exon	TRUE	canonical	3	27	junction_3	41.579680206733	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTACTTTTATAAGT	-86064894	True	NA	-8	True	ATTAAA	-20	NA	86069084	85957170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
WTC11_00015415	chr11	-	3457	20	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	21.6541692773335	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064867	True	NA	-14	True	AATAAA	-18	NA	86069057	85957683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
WTC11_00015418	chr11	-	3461	19	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	31.7108853063673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064880	True	NA	-14	True	AATAAA	-18	NA	86069070	85957683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
WTC11_00015424	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	607.606163563208	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311924	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
WTC11_00015427	chr11	-	6144	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	899.21904388691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATTGTTTTATT	-88311964	True	NA	NA	False	AATAAA	-33	NA	88337780	88320810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
WTC11_00015428	chr11	-	726	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	-2	0	0	multi-exon	FALSE	canonical	3	161	junction_1	909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311906	True	NA	-21	True	AATAAA	-18	NA	88337722	88326085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88334936_88335083_88337500
WTC11_00015429	chr11	-	902	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	-2	0	0	multi-exon	FALSE	canonical	3	26	junction_1	832.809514534987	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311909	True	NA	-21	True	AATAAA	-18	NA	88337725	88326085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
WTC11_00015430	chr11	-	3204	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	-11	-2057	0	79	multi-exon	FALSE	canonical	3	47	junction_6	169.932655596317	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAAAGATGGGAAACCT	-90213955	True	NA	81	True	NA	NA	NA	90223041	90200349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
WTC11_00015431	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_6	52.0523774673165	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-90213963	True	NA	2	True	AATAAA	-30	NA	90223049	90200428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
WTC11_00015432	chr11	-	4805	4	FSM	ENSG00000110172.12	ENST00000529726.1	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_3	24.0554914035583	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTTTCTATGTGGGAT	-90209451	False	NA	NA	False	NA	NA	NA	90209478	90201948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459
WTC11_00015434	chr11	-	536	5	FSM	ENSG00000110172.12	ENST00000533062.5	575	5	0	39	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.504157968215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTTTATACAGTTACA	-90213985	True	NA	NA	False	AATAAA	-10	NA	90223071	90214017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90214176_90215173_90215231_90216463_90216554_90218134_90218185_90222890
WTC11_00015436	chr11	-	6120	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	62	-145	0	145	multi-exon	FALSE	canonical	3	149	junction_5	20.0489401216124	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAAGTTTTAAGAGCA	-93195219	True	NA	NA	False	NA	NA	NA	93197929	93144028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
WTC11_00015437	chr11	-	2060	2	FSM	ENSG00000180773.15	ENST00000527503.1	2078	2	18	0	18	0	multi-exon	FALSE	canonical	3	163	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGTATAACAAAAAGCTC	NA	False	NA	NA	False	AATAAA	-7	NA	93155470	93148147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93148845_93154107
WTC11_00015441	chr11	-	998	3	FSM	ENSG00000166002.7	ENST00000298966.7	987	3	0	-11	0	11	multi-exon	FALSE	canonical	3	410	junction_1	22	1230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTTGCAAGGAGGTG	-93538457	True	NA	1	True	AATAAA	-30	NA	93543391	93478460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93479270_93499275_93499349_93543275
WTC11_00015444	chr11	-	2022	7	FSM	ENSG00000166012.17	ENST00000525928.5	1710	7	-301	-11	276	0	multi-exon	FALSE	canonical	0	0	junction_2	195.278433695753	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93727470	False	NA	-11	True	ATTAAA	-24	NA	93734962	93730271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349
WTC11_00015445	chr11	-	4368	4	FSM	ENSG00000166012.17	ENST00000530769.5	4358	4	0	-10	0	0	multi-exon	FALSE	canonical	3	431	junction_1	57.7119282875444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93728356	False	NA	-11	True	ATTAAA	-24	NA	93735848	93730271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93731217_93731752_93731800_93732243
WTC11_00015446	chr11	-	1728	9	FSM	ENSG00000166012.17	ENST00000546088.5	1728	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	235.834124704208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93728683	False	NA	-11	True	ATTAAA	-24	NA	93736175	93730271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93734962
WTC11_00015447	chr11	-	1535	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93733987	True	NA	-11	True	ATTAAA	-24	NA	93741479	93730271	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
WTC11_00015448	chr11	-	1080	8	FSM	ENSG00000166012.17	ENST00000529435.5	1011	8	2	-71	2	0	multi-exon	FALSE	canonical	0	0	junction_2	217.006912332303	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAGAAAGTCAGCAT	-93727744	False	NA	-22	True	ATTAAA	-13	NA	93735236	93730282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624
WTC11_00015450	chr11	-	662	5	FSM	ENSG00000166012.17	ENST00000534079.5	656	5	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.843971707427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATGCTTGAAAAATTAA	-93725009	False	NA	-27	True	AATAAA	-22	NA	93732501	93730193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243
WTC11_00015452	chr11	-	1127	10	FSM	ENSG00000166012.17	ENST00000527169.5	1127	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	194.209572433213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGTTTTTATCTTAAC	-93733987	True	NA	NA	False	ATTAAA	-34	NA	93741479	93731145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93731217_93731752_93731800_93732243_93732314_93733086_93733122_93733349_93733398_93734624_93734661_93737063_93737240_93738108_93738500_93739236_93739332_93741321
WTC11_00015456	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	28.6034962897895	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-93734003	True	NA	NA	False	NA	NA	NA	93741495	93735566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
WTC11_00015458	chr11	-	386	1	FSM	ENSG00000256745.1	ENST00000397300.2	549	1	341	-178	341	178	mono-exon	FALSE	NA	NA	NA	NA	NA	980	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAAATTTTCTGCAGC	NA	False	NA	NA	False	AAGAAA	-17	NA	94188656	94188270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94188300_94188700
WTC11_00015459	chr11	-	6264	21	NNC	ENSG00000020922.13	novel	6841	20	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.4302811142157	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-94490173	True	NA	-24	True	AATAAA	-35	NA	94493837	94415569	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_94416593_94417269_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
WTC11_00015460	chr11	-	6270	21	NNC	ENSG00000020922.13	novel	6841	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.4302811142157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-94490179	True	NA	-24	True	AATAAA	-35	NA	94493843	94415569	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_94416600_94417276_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
WTC11_00015461	chr11	-	6864	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	1	-24	0	24	multi-exon	TRUE	canonical	0	0	junction_19	60.246722649682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTGGCTTTTGCACA	-94490179	True	NA	0	True	ATTAAA	-26	NA	94493843	94415545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
WTC11_00015463	chr11	-	2598	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	-10	0	0	multi-exon	FALSE	canonical	2	10	junction_4	63.281557783888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-94490210	True	NA	NA	False	AATAAA	-31	NA	94493874	94419865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
WTC11_00015469	chr11	-	3986	11	NNC	ENSG00000077458.13	novel	3932	10	NA	NA	4	10158	intron_retention	FALSE	non_canonical	0	0	junction_1	59.8244097338202	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTAGCAAGAATATAAT	-95789772	False	800	NA	False	NA	NA	NA	95789812	95758794	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_95758819_95768952_95771651_95775921_95776024_95778821_95778958_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
WTC11_00015470	chr11	-	3974	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	-153	2	0	0	multi-exon	FALSE	canonical	3	42	junction_3	51.6898442636462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTATTAGTTTTCAAT	-95789728	False	NA	-6	True	AATAAA	-14	NA	95789768	95768954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
WTC11_00015478	chr11	-	4505	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	46	-47	0	45	multi-exon	FALSE	canonical	3	28	junction_15	122.425850574496	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGCAGTATTTTTTC	-95923806	False	NA	41	True	NA	NA	NA	95923818	95832834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
WTC11_00015479	chr11	-	4480	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	-46	-47	0	45	multi-exon	FALSE	canonical	3	26	junction_14	119.090858814022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGCAGTATTTTTTC	-95923852	False	NA	41	True	NA	NA	NA	95923864	95832834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
WTC11_00015480	chr11	-	4606	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	23	-47	0	45	multi-exon	FALSE	canonical	3	77	junction_13	144.309697833822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGCAGTATTTTTTC	-95918663	True	NA	41	True	NA	NA	NA	95924100	95832834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
WTC11_00015481	chr11	-	4737	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	-58	-47	-50	45	multi-exon	FALSE	canonical	3	26	junction_14	159.034363861679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGCAGTATTTTTTC	-95924169	False	NA	41	True	NA	NA	NA	95924181	95832834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
WTC11_00015483	chr11	-	5404	15	FSM	ENSG00000087053.20	ENST00000675957.1	5402	15	0	-2	0	0	multi-exon	FALSE	canonical	3	28	junction_14	126.694574888282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95923855	False	NA	-4	True	AATAAA	-18	NA	95923867	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
WTC11_00015486	chr11	-	4628	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	-1208	0	0	multi-exon	FALSE	canonical	3	77	junction_13	140.234722318511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95918659	True	NA	-4	True	AATAAA	-18	NA	95924096	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
WTC11_00015488	chr11	-	5394	14	FSM	ENSG00000087053.20	ENST00000675767.1	5392	14	0	-2	0	0	multi-exon	FALSE	canonical	3	7	junction_11	141.14422520136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95918664	True	NA	-4	True	AATAAA	-18	NA	95924101	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865590_95865677_95888155_95888262_95923874
WTC11_00015490	chr11	-	4495	15	FSM	ENSG00000087053.20	ENST00000346299.10	4495	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	78.4301326932813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95918670	True	NA	-4	True	AATAAA	-18	NA	95924107	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
WTC11_00015492	chr11	-	4886	17	FSM	ENSG00000087053.20	ENST00000674974.1	4705	17	-8	-173	0	171	multi-exon	FALSE	canonical	3	9	junction_14	172.680657211513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCCACTACAATTCAA	-95924119	False	NA	NA	False	NA	NA	NA	95924131	95832708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95923874
WTC11_00015497	chr11	-	7941	16	FSM	ENSG00000087053.20	ENST00000675030.1	7939	16	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_13	175.739529481054	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95924111	False	NA	-4	True	AATAAA	-18	NA	95924123	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95923874
WTC11_00015498	chr11	-	4743	16	FSM	ENSG00000087053.20	ENST00000675848.1	4741	16	0	-2	0	0	multi-exon	FALSE	canonical	1	4	junction_12	133.088374982774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95924111	False	NA	-4	True	AATAAA	-18	NA	95924123	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865439_95865677_95888155_95888262_95914241_95914313_95923874
WTC11_00015499	chr11	-	5414	14	FSM	ENSG00000087053.20	ENST00000675495.1	5412	14	0	-2	0	0	multi-exon	FALSE	canonical	3	198	junction_13	81.2909887507281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95924119	False	NA	-4	True	AATAAA	-18	NA	95924131	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
WTC11_00015502	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_15	80.6985061131177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-95918663	True	NA	-11	True	ATTAAA	-27	NA	95924100	95834088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
WTC11_00015503	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	167.224131137232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	-95918656	True	NA	-14	True	ATTAAA	-24	NA	95924093	95834091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
WTC11_00015504	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	154.218544199457	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-95918661	True	NA	-25	True	ATTAAA	-13	NA	95924098	95834102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
WTC11_00015505	chr11	-	3326	18	NIC	ENSG00000087053.20	novel	2329	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	171.023825208441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTTTTAAACTTTGTT	-95923904	False	NA	-27	True	ATTAAA	-11	NA	95923916	95834104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866383_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923874
WTC11_00015506	chr11	-	2152	18	FSM	ENSG00000087053.20	ENST00000497683.6	2152	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	186.448504908725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	-95923751	False	NA	NA	False	NA	NA	NA	95923763	95835289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923691
WTC11_00015509	chr11	-	5147	9	FSM	ENSG00000149231.16	ENST00000680171.1	4939	9	32	-240	0	230	multi-exon	FALSE	canonical	3	111	junction_2	13.4297943022222	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAACAAATGGGGTGGA	-96387752	True	NA	NA	False	NA	NA	NA	96389880	96352538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529
WTC11_00015511	chr11	-	2030	7	FSM	ENSG00000149231.16	ENST00000679696.1	5328	7	0	3298	0	230	multi-exon	FALSE	canonical	1	1	junction_6	49.468564653615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAACAAATGGGGTGGA	-96387789	True	NA	NA	False	NA	NA	NA	96389917	96352538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96389843
WTC11_00015513	chr11	-	3170	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	-14	0	4	multi-exon	FALSE	canonical	3	28	junction_9	35.6744539785358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGTTCTATATTTT	-96387752	True	NA	NA	False	AATAAA	-30	NA	96389880	96352764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
WTC11_00015514	chr11	-	7656	7	FSM	ENSG00000149231.16	ENST00000645439.1	7644	7	0	-12	0	4	multi-exon	FALSE	canonical	3	111	junction_2	15.4856564457422	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGTTCTATATTTT	-96387759	True	NA	NA	False	AATAAA	-30	NA	96389887	96352764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961
WTC11_00015519	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	40.1149582642586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	-96389910	False	NA	NA	False	NA	NA	NA	96389921	96352804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
WTC11_00015522	chr11	-	8753	2	FSM	ENSG00000149231.16	ENST00000679577.1	8744	2	0	-9	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	-96387651	True	NA	-7	True	AATAAA	-12	NA	96389779	96380538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96383474_96383961
WTC11_00015524	chr11	-	3941	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	31	0	-2	0	multi-exon	FALSE	canonical	3	78	junction_4	28.7608675112556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	-96389914	False	NA	-7	True	AATAAA	-12	NA	96389925	96380538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
WTC11_00015527	chr11	-	3386	5	NNC	ENSG00000152558.15	novel	3304	5	NA	NA	-62	-5	at_least_one_novel_splicesite	FALSE	canonical	2	68	junction_3	282.987632238584	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTTTAAGTGTGTGA	-102452584	False	NA	-12	True	AATAAA	-14	NA	102452901	102396336	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_102398892_102401538_102401693_102401915_102402158_102448811_102448869_102452523
WTC11_00015528	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_5	68.1007656764172	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	-103064922	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
WTC11_00015530	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	402.000304599336	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-103064939	True	NA	-29	True	NA	NA	NA	103092177	103062170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
WTC11_00015534	chr11	-	2988	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	163	-2203	0	118	multi-exon	FALSE	canonical	3	50	junction_2	38.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATGCTGCATATGTTA	-106017962	True	NA	NA	False	NA	NA	NA	106022240	106007780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106010111_106010455_106011068_106022194
WTC11_00015536	chr11	-	4125	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	-22	0	22	multi-exon	FALSE	canonical	3	21	junction_2	53	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTCTAAGGGTAGAGGT	-106017962	True	NA	24	True	AATAAA	-44	NA	106022240	106007876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106010111_106010455_106011068_106020961
WTC11_00015537	chr11	-	3202	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	7	-20	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	52.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCTATACTATCTGAGAA	-106017955	True	NA	-18	True	AATAAA	-23	NA	106022233	106007918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_106010111_106010455_106011068_106021835
WTC11_00015538	chr11	-	780	2	FSM	ENSG00000170903.12	ENST00000530108.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTGACTGGCGAGCAC	-106017972	True	NA	NA	False	NA	NA	NA	106022250	106010702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106011068_106021835
WTC11_00015547	chr11	-	4350	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-15	-1091	-15	1091	multi-exon	FALSE	canonical	3	108	junction_15	13.5825045211015	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAGTTTTTGAATAT	-107454520	True	NA	NA	False	CATAAA	-16	NA	107457840	107325268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
WTC11_00015550	chr11	-	2776	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	-7	0	7	multi-exon	FALSE	canonical	3	219	junction_5	19.5040550467154	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTTTGATTAACC	-107857336	True	NA	NA	False	ATTAAA	-32	NA	107858787	107790983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
WTC11_00015553	chr11	-	8058	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	-1945	0	1945	multi-exon	TRUE	canonical	3	40	junction_2	8.39426398322504	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTTTTTGTTTTTTC	-108219713	True	NA	-3	True	ATTAAA	-24	NA	108222638	108155269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
WTC11_00015555	chr11	-	2688	2	NNC	ENSG00000110723.12	novel	10304	6	NA	NA	30093	77609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCCATTCTAACTGGCG	NA	False	NA	NA	False	NA	NA	NA	108508094	108427825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_108427849_108505429
WTC11_00015557	chr11	-	4464	8	FSM	ENSG00000178202.13	ENST00000323468.10	4253	8	-198	-13	-198	9	multi-exon	FALSE	canonical	3	76	junction_5	2.61080955464244	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGTTTTTTAAGAAAG	NA	False	NA	3	True	AATAAA	-34	NA	108498582	108472102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_108474953_108477606_108477712_108479300_108479496_108481179_108481377_108482005_108482223_108486156_108486441_108490969_108491168_108498164
WTC11_00015562	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	183.174403840226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-111760830	True	NA	-9	True	AATAAA	-23	NA	111766382	111726907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
WTC11_00015563	chr11	-	3150	14	FSM	ENSG00000137713.16	ENST00000426998.6	1888	14	0	-1262	0	1256	multi-exon	FALSE	canonical	2	12	junction_13	234.619293788366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTTTGTGCTTTAAGG	-111760834	True	NA	NA	False	NA	NA	NA	111766386	111725651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111766247
WTC11_00015565	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	157.013247094994	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	-111760816	True	NA	32	True	NA	NA	NA	111766368	111741320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
WTC11_00015567	chr11	-	4489	6	FSM	ENSG00000086848.15	ENST00000532425.6	4485	6	0	-4	0	4	multi-exon	FALSE	canonical	3	5	junction_1	32.4431811017354	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTAATGTGACATT	-111838291	True	NA	-15	True	AATAAA	-19	NA	111838305	111782190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786095_111786401_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248
WTC11_00015568	chr11	-	6152	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	11	-5	-10	5	multi-exon	TRUE	canonical	3	24	junction_5	16.4651766105416	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTAATGTGACATTT	-111870644	True	NA	-14	True	AATAAA	-20	NA	111871570	111782189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
WTC11_00015569	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_14	10.903332199893	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	-111870607	True	NA	22	True	AATAAA	-45	NA	111871533	111786255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
WTC11_00015571	chr11	-	1371	11	FSM	ENSG00000086848.15	ENST00000613181.4	1373	11	2	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_8	22.5308677152035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGACCTGTGAATGTCTG	-111870618	True	NA	NA	False	NA	NA	NA	111871544	111837538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111868601_111868737_111870231_111870371_111871351
WTC11_00015572	chr11	-	3586	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	-701	-111	-409	111	multi-exon	TRUE	canonical	3	14	junction_4	3.96074487943871	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGGGCCTTCTGTTGT	NA	False	NA	0	True	ATTAAA	-15	NA	111879866	111873944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
WTC11_00015573	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.62635271879577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	-111879445	True	NA	NA	False	NA	NA	NA	111879457	111874758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
WTC11_00015574	chr11	-	2268	3	FSM	ENSG00000109846.9	ENST00000533971.2	2271	3	0	3	0	-3	multi-exon	FALSE	canonical	3	5	junction_2	6.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATTATCAAGCTAATAAA	-111913092	True	NA	-37	True	NA	NA	NA	111913184	111908660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111910450_111911523_111911923_111913104
WTC11_00015578	chr11	-	1139	6	FSM	ENSG00000150773.12	ENST00000532211.5	1103	6	-37	1	0	-1	multi-exon	TRUE	canonical	2	4	junction_1	2.22710574513201	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAGTAGTTTATCTTA	-112073965	True	NA	NA	False	ATTAAA	-20	NA	112074017	112067798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
WTC11_00015580	chr11	-	819	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	3	-17	3	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-112070156	True	NA	NA	False	AAGAAA	-31	NA	112086795	112084799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112086639
WTC11_00015581	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	209.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	-112070083	True	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112085966_112086311_112086639
WTC11_00015582	chr11	-	1152	3	FSM	ENSG00000150779.12	ENST00000509359.6	1155	3	3	0	3	0	multi-exon	FALSE	canonical	3	321	junction_1	76	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-112070156	True	NA	NA	False	AAGAAA	-31	NA	112086795	112084799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112085977_112086311_112086639
WTC11_00015584	chr11	-	2878	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	-5	0	5	multi-exon	FALSE	canonical	3	222	junction_4	18.3985506675571	1046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGTGTCTTTAATAACA	-113770473	True	NA	0	True	AATAAA	-21	NA	113773692	113733181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
WTC11_00015586	chr11	-	3838	18	NIC	ENSG00000048028.11	novel	3431	22	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	91	junction_16	145.272110741083	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGGTGTGCAGTATG	-113833453	False	59	-9	True	AATAAA	-12	NA	113833512	113797876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830947_113831919_113831994_113833419
WTC11_00015587	chr11	-	4673	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	-4	0	4	multi-exon	FALSE	canonical	3	59	junction_7	168.364415447234	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865256	True	NA	-2	True	AATAAA	-19	NA	113875570	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
WTC11_00015590	chr11	-	4070	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	74	-713	0	0	multi-exon	FALSE	canonical	3	83	junction_21	135.886323706698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-113865182	True	NA	NA	False	NA	NA	NA	113875496	113798091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
WTC11_00015593	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	61.8321047973742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-113865214	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
WTC11_00015599	chr11	-	2111	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	-161	30	-161	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	2846	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGAATAAAGTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	114400672	114398561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_114398600_114400700
WTC11_00015600	chr11	-	5572	11	FSM	ENSG00000182985.18	ENST00000537058.5	3550	11	21	-2043	0	1361	multi-exon	FALSE	canonical	3	40	junction_2	50.2614166135416	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTACTCATTCATTGCAT	-115501101	True	NA	NA	False	NA	NA	NA	115504394	115172263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_115176593_115178643_115178776_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
WTC11_00015603	chr11	-	2195	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	-3	0	0	multi-exon	FALSE	canonical	3	98	junction_7	13.4329611197399	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTAACTGGGTATTCT	-116769194	True	NA	-7	True	AATAAA	-25	NA	116772987	116748169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
WTC11_00015604	chr11	-	1793	10	FSM	ENSG00000137656.12	ENST00000375445.7	1793	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.3615717843347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTAACTGGGTATTCT	-116769194	True	NA	-7	True	AATAAA	-25	NA	116772987	116748169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762954_116763267_116765361_116765447_116770128_116770223_116772821
WTC11_00015606	chr11	-	691	8	FSM	ENSG00000109917.11	ENST00000449430.1	691	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	219.248531049462	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTCACTGGCCAGT	-116779602	False	NA	NA	False	NA	NA	NA	116785843	116782157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116782245_116782918_116783030_116783529_116783620_116784377_116784499_116784858_116784922_116785098_116785147_116785513_116785637_116785795
WTC11_00015612	chr11	-	3054	13	FSM	ENSG00000160584.17	ENST00000413553.1	3054	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	17.272931617611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTGTGAGACTCTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	116957044	116868791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947
WTC11_00015617	chr11	-	5835	9	FSM	ENSG00000186318.18	ENST00000313005.11	5835	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	3.51559027760631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGGGTTACTTTTTTT	-117315720	True	NA	-2	True	AGTAAA	-21	NA	117316256	117285697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117294009_117295130_117295348_117296872_117296962_117315534
WTC11_00015618	chr11	-	593	3	FSM	ENSG00000186318.18	ENST00000509916.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGCTTGCCATGGTGAG	NA	False	NA	NA	False	NA	NA	NA	117291997	117290502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117290660_117290899_117291050_117291711
WTC11_00015623	chr11	-	1202	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	109	59	-41	-59	multi-exon	FALSE	canonical	3	8	junction_2	2.48746859276655	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTACTACTACTACTAAT	-118264360	True	NA	NA	False	ATTAAA	-43	NA	118264427	118256969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
WTC11_00015624	chr11	-	1661	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	-104	5	0	-5	multi-exon	TRUE	canonical	3	52	junction_9	13.0371370380448	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGCTCTATTATATTG	-118564998	True	NA	NA	False	AGTAAA	-12	NA	118566035	118544547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
WTC11_00015626	chr11	-	1182	6	FSM	ENSG00000118096.10	ENST00000531939.5	1182	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	15.1710250148103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCACTACACCAGGTAA	-118559385	False	NA	NA	False	NA	NA	NA	118560422	118552229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784
WTC11_00015628	chr11	-	6083	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	72	-3	72	0	multi-exon	FALSE	canonical	3	15	junction_13	141.016932132028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-118790785	False	NA	-1	True	AATAAA	-20	NA	118790876	118747762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
WTC11_00015630	chr11	-	2513	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	123.137100672909	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCCCAAGTAAAAATTTC	-118790850	False	25289	-26	True	AATACA	-15	NA	118790941	118751365	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
WTC11_00015631	chr11	-	1936	13	FSM	ENSG00000110367.14	ENST00000526070.2	1936	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	143.814768017753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118790857	False	25289	-38	True	AATAAA	-13	NA	118790948	118754588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
WTC11_00015632	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-118765860	True	NA	NA	False	NA	NA	NA	118791149	118785832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118786519_118791097
WTC11_00015633	chr11	-	7981	8	FSM	ENSG00000186174.13	ENST00000334801.7	10005	8	442	1582	442	679	multi-exon	FALSE	canonical	1	2	junction_7	2.6954231805876	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGCTCTTTTCTTCCCT	-118910420	False	NA	NA	False	NA	NA	NA	118910462	118895456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118899509_118899916_118900199_118900618_118902909_118902989_118903075_118903235_118903453_118907482_118907603_118908269_118908656_118909913
WTC11_00015634	chr11	-	696	4	FSM	ENSG00000186174.13	ENST00000527266.1	696	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCCTCCTGAGGACAG	-118908589	False	NA	NA	False	NA	NA	NA	118908625	118902773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118902909_118902989_118903075_118907482_118907603_118908269
WTC11_00015635	chr11	-	1339	2	FSM	ENSG00000255121.2	ENST00000526453.1	1359	2	0	20	0	-20	multi-exon	FALSE	canonical	2	3	junction_1	0	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATCCTCCCAGTGA	-118997423	True	NA	NA	False	NA	NA	NA	118998004	118996214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118997277_118997727
WTC11_00015636	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	7760.36555195694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-118985601	True	NA	-10	True	AATAAA	-17	NA	119018330	119015711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
WTC11_00015637	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_3	7562.95641184716	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-119018657	False	NA	-10	True	AATAAA	-17	NA	119018678	119015711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
WTC11_00015638	chr11	-	485	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	-2	0	2	multi-exon	FALSE	canonical	3	8677	junction_1	4495.84980843444	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGAGTATGTCTGT	-118985614	True	NA	-13	True	AATAAA	-14	NA	119018343	119015714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
WTC11_00015639	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	6346.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-119016788	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361
WTC11_00015640	chr11	-	2499	2	FSM	ENSG00000118181.11	ENST00000524864.1	1078	2	0	-1421	0	-214	multi-exon	FALSE	canonical	3	14396	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTATCAAACTGGTTTCA	-119018645	False	NA	NA	False	NA	NA	NA	119018666	119015939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119018054_119018281
WTC11_00015641	chr11	-	2631	6	FSM	ENSG00000137700.18	ENST00000526275.5	2626	6	0	-5	0	0	multi-exon	FALSE	canonical	3	325	junction_3	14.3471251475688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-119025263	False	NA	3	True	ATTAAA	-22	NA	119029034	119024350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627
WTC11_00015642	chr11	-	2321	10	FSM	ENSG00000137700.18	ENST00000650539.1	2304	10	0	-17	0	0	multi-exon	FALSE	canonical	2	3	junction_3	141.422752984548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-119026608	False	NA	3	True	ATTAAA	-22	NA	119030379	119024350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119025330_119025691_119025758_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030169
WTC11_00015643	chr11	-	5867	3	FSM	ENSG00000137700.18	ENST00000532085.1	5862	3	0	-5	0	0	multi-exon	FALSE	canonical	3	326	junction_2	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-119027092	True	NA	3	True	ATTAAA	-22	NA	119030863	119024350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119027096_119027627
WTC11_00015645	chr11	-	2029	10	FSM	ENSG00000137700.18	ENST00000530407.5	1472	10	-30	-527	4	0	multi-exon	FALSE	canonical	1	3	junction_8	136.762929061322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030902	119024350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119028734_119028835_119029391_119029565_119030848
WTC11_00015655	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	227.426070625159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-119030885	True	NA	66	True	NA	NA	NA	119057227	119044310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
WTC11_00015670	chr11	-	1384	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	-11	0	6	multi-exon	FALSE	canonical	3	131	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCATTTTGCAAG	-119082312	True	NA	-17	True	ATTAAA	-26	NA	119095449	119093867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119094262_119094459
WTC11_00015672	chr11	-	2214	7	FSM	ENSG00000172269.20	ENST00000682232.1	2214	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	221.554357513756	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCACTCCAGCCTGGGT	-119096510	True	NA	NA	False	NA	NA	NA	119101878	119096024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
WTC11_00015674	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	160.141773922678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119096510	True	NA	-11	True	AATAAA	-18	NA	119101878	119096509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
WTC11_00015675	chr11	-	2266	7	FSM	ENSG00000172269.20	ENST00000481084.5	2343	7	78	-1	32	0	multi-exon	FALSE	canonical	1	2	junction_6	169.820902390986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119102053	False	NA	-11	True	AATAAA	-18	NA	119102064	119096509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119101017
WTC11_00015677	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000683567.1	1811	8	0	-6	0	0	multi-exon	FALSE	canonical	3	18	junction_4	155.948709516943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTGTTTATGTAGG	-119101515	False	NA	-18	True	AATAAA	-11	NA	119101526	119096516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017
WTC11_00015682	chr11	-	2154	7	FSM	ENSG00000172269.20	ENST00000682192.1	2148	7	0	-6	0	0	multi-exon	FALSE	canonical	3	351	junction_6	43.1460697321707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTGTTTATGTAGG	-119096489	True	NA	-18	True	AATAAA	-11	NA	119101857	119096516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
WTC11_00015683	chr11	-	2213	8	FSM	ENSG00000172269.20	ENST00000683373.1	2207	8	0	-6	0	0	multi-exon	FALSE	canonical	3	351	junction_7	49.3550237295753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTGTTTATGTAGG	-119096489	True	NA	-18	True	AATAAA	-11	NA	119101857	119096516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
WTC11_00015687	chr11	-	2997	4	FSM	ENSG00000172269.20	ENST00000530052.2	2997	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	22.8813364023074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTGTTTATGTAGG	-119096499	True	NA	-18	True	AATAAA	-11	NA	119101867	119096516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119098044_119098402_119098488_119100261_119100409_119100629
WTC11_00015690	chr11	-	2574	6	FSM	ENSG00000172269.20	ENST00000682691.1	2558	6	0	-16	0	0	multi-exon	FALSE	canonical	3	351	junction_5	55.632364681002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTGTTTATGTAGG	-119096510	True	NA	-18	True	AATAAA	-11	NA	119101878	119096516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119098044_119098402_119098488_119100261_119100409_119100629_119101139_119101494
WTC11_00015702	chr11	-	3330	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	-3	0	3	multi-exon	FALSE	canonical	3	24	junction_15	5.11033810579648	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCTTTTTATTCATC	-119316224	True	NA	-1	True	AATAAA	-22	NA	119317130	119308525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
WTC11_00015704	chr11	-	1346	2	FSM	ENSG00000223953.6	ENST00000530681.2	1046	2	-55	-245	-55	0	multi-exon	FALSE	canonical	3	10	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGGCTCCAGCCTTTCT	-119340503	True	NA	NA	False	AATAAA	-14	NA	119340622	119338941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119339849_119340183
WTC11_00015706	chr11	-	3712	13	FSM	ENSG00000036672.16	ENST00000260187.7	3697	13	-14	-1	7	1	multi-exon	FALSE	canonical	3	15	junction_11	6.35249294896631	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGATGTTGGAATCTT	-119381123	True	NA	1	True	AATAAA	-21	NA	119381704	119355213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119372706_119373522_119381472
WTC11_00015708	chr11	-	4502	4	FSM	ENSG00000154096.14	ENST00000284240.10	4502	4	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_3	39.4658783705058	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGACTAGAGGACTCTAG	-119366155	True	NA	NA	False	AATAAA	-25	NA	119423172	119415475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119419521_119420050_119420387_119420868_119420930_119423112
WTC11_00015709	chr11	-	2427	1	FSM	ENSG00000154096.14	ENST00000584021.1	2427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAAGGGCA	-119421218	False	NA	-32	True	NA	NA	NA	119421246	119418819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119418800_119421200
WTC11_00015711	chr11	-	581	4	FSM	ENSG00000154096.14	ENST00000524970.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	1133.10615370121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAAGTGGGGACCCCA	-119366155	True	NA	NA	False	NA	NA	NA	119423172	119419307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119419432_119420050_119420387_119420868_119420930_119423112
WTC11_00015716	chr11	-	5959	6	FSM	ENSG00000110400.11	ENST00000264025.8	5956	6	0	-3	0	3	multi-exon	FALSE	canonical	3	35	junction_1	28.8069436074013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCATCCCATCACTGCC	-119726333	True	NA	NA	False	AATAAA	-18	NA	119729200	119660988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119665298_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
WTC11_00015718	chr11	-	449	2	FSM	ENSG00000110400.11	ENST00000532197.1	452	2	0	3	0	-3	multi-exon	FALSE	canonical	3	114	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTGATTCAGTCT	-119677584	False	NA	-5	True	AATAAA	-14	NA	119677601	119676817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119677220_119677554
WTC11_00015721	chr11	-	2284	10	NNC	ENSG00000109971.14	novel	2264	9	NA	NA	0	87008	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3410.99031273621	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGAGCCAGGCGTGG	-123007290	True	NA	NA	False	AAAAAG	-1	NA	123062136	122970480	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_122970511_123057498_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015722	chr11	-	2281	10	NNC	ENSG00000109971.14	novel	2264	9	NA	NA	0	49291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3410.99031273621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAAAACATTTGGGC	-123007278	True	NA	NA	False	AAAAAG	-9	NA	123062124	123008197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123008232_123057493_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015723	chr11	-	2283	10	NNC	ENSG00000109971.14	novel	2264	9	NA	NA	0	49282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3410.99031273621	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTGCATTTTAAAAA	-123007290	True	NA	NA	False	NA	NA	NA	123062136	123008206	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123008232_123057494_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015724	chr11	-	2269	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	-5	0	5	multi-exon	FALSE	canonical	3	7852	junction_5	1844.61188329686	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCTTTAAATAATCTC	-123007290	True	NA	NA	False	AATAAA	-31	NA	123062136	123057483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015725	chr11	-	1885	8	FSM	ENSG00000109971.14	ENST00000453788.6	2004	8	119	0	-9	0	multi-exon	FALSE	canonical	3	510	junction_1	2734.02110975234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123062205	False	NA	NA	False	AATAAA	-26	NA	123062216	123057488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057829_123058766_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015726	chr11	-	1885	6	FSM	ENSG00000109971.14	ENST00000534319.5	1884	6	0	-1	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	2149.18025302672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	-123060375	False	NA	NA	False	AATAAA	-18	NA	123060386	123057496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115
WTC11_00015727	chr11	-	2260	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	-74	0	-74	0	multi-exon	FALSE	canonical	3	7852	junction_5	1931.47485151653	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	-123061395	False	NA	NA	False	AATAAA	-18	NA	123061406	123057496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
WTC11_00015728	chr11	-	963	4	FSM	ENSG00000109971.14	ENST00000524552.5	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	8638	junction_3	1824.39706935378	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGTGCTTCCTCAGG	-123059437	False	NA	NA	False	NA	NA	NA	123059448	123057778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058
WTC11_00015729	chr11	-	504	3	FSM	ENSG00000109971.14	ENST00000526862.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTCCTCATCAAGC	-123060212	False	NA	NA	False	NA	NA	NA	123060223	123059155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123059262_123059472_123059763_123060115
WTC11_00015730	chr11	-	1509	5	FSM	ENSG00000109971.14	ENST00000527983.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_1	273.558494658821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGAGAATGTTCAAGA	-123062196	False	NA	89	True	NA	NA	NA	123062207	123059232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00015731	chr11	-	1112	5	FSM	ENSG00000109971.14	ENST00000528292.5	1112	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	3524.10236797968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAACAATGGTATCTCA	-123007278	True	NA	NA	False	NA	NA	NA	123062124	123059475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123060029_123060115_123060269_123060592_123060799_123061119_123061259_123062063
WTC11_00015734	chr11	-	1045	4	FSM	ENSG00000109971.14	ENST00000525624.5	1048	4	3	0	3	0	multi-exon	FALSE	canonical	2	15	junction_3	3977.85824561688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTACCATTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	123063227	123060117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123060269_123060592_123060799_123061119_123061330_123062749
WTC11_00015739	chr11	-	206	1	FSM	ENSG00000254449.1	ENST00000528675.1	1507	1	1322	-21	1322	21	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGGGCTAGCCCAGG	NA	False	NA	NA	False	AAAACA	-32	NA	123598130	123597924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123597900_123598100
WTC11_00015740	chr11	-	3998	9	NNC	ENSG00000166261.11	novel	4435	9	NA	NA	0	-164	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	38.5095361566457	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGTTTCTGGGACT	-123737744	True	NA	-2	True	AATAAA	-23	NA	123741614	123724340	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730490_123730986_123740116_123740233_123740416_123740537_123741548
WTC11_00015744	chr11	-	855	4	FSM	ENSG00000166261.11	ENST00000533463.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	41.2148840428633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGGAGACCAAGGCGG	-123737797	True	NA	NA	False	NA	NA	NA	123741667	123730509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123730986_123740116_123740233_123740392_123740537_123741548
WTC11_00015748	chr11	-	1905	3	FSM	ENSG00000110013.13	ENST00000436137.2	2272	3	131	236	49	-236	multi-exon	FALSE	canonical	2	5	junction_1	1	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCCTGAGCATCTTCTG	-124673243	True	NA	NA	False	AGTAAA	-22	NA	124673690	124659109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124660804_124669359_124669522_124673641
WTC11_00015749	chr11	-	4577	3	FSM	ENSG00000120458.13	ENST00000526629.1	3086	3	-1294	-197	-1294	167	multi-exon	FALSE	canonical	3	92	junction_1	9	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAAGGTCACTGAACAT	-124777525	False	NA	NA	False	NA	NA	NA	124777536	124766330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124768029_124772993_124773055_124774718
WTC11_00015750	chr11	-	2390	4	FSM	ENSG00000120458.13	ENST00000374979.8	2384	4	0	-6	0	6	multi-exon	FALSE	canonical	3	16	junction_3	40.7376429798725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTAGTTGAGCTTTTTG	-124798372	True	NA	NA	False	ATTAAA	-20	NA	124800406	124766491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124768029_124772993_124773055_124774718_124774975_124799870
WTC11_00015751	chr11	-	2534	4	FSM	ENSG00000120458.13	ENST00000674284.1	2528	4	0	-6	0	6	multi-exon	FALSE	canonical	3	46	junction_3	26.9485105752103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTAGTTGAGCTTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	124800706	124766491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124768029_124772993_124773055_124774718_124774819_124799870
WTC11_00015754	chr11	-	2065	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	-13	0	13	multi-exon	FALSE	canonical	1	5	junction_1	3.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATCACTTAAAATTC	-124953735	True	NA	NA	False	AATAAA	-17	NA	124953966	124949191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124950560_124951338_124951551_124953481
WTC11_00015755	chr11	-	952	3	FSM	ENSG00000285825.2	ENST00000649496.1	952	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGAAGTCAGGAGTTC	-124953324	False	NA	NA	False	NA	NA	NA	124953555	124950330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124950560_124950901_124951551_124953481
WTC11_00015756	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	28.9179874818425	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-125110359	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
WTC11_00015757	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	30.8625987240219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	-125110441	True	NA	NA	False	NA	NA	NA	125111708	125096544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
WTC11_00015758	chr11	-	2565	2	FSM	ENSG00000150433.10	ENST00000527257.1	4547	2	1982	0	-250	0	multi-exon	FALSE	canonical	3	118	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125101792	False	NA	-21	True	AATAAA	-17	NA	125103059	125097034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200
WTC11_00015759	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	42.4996732013579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-125110350	True	NA	-128	True	NA	NA	NA	125111617	125097141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
WTC11_00015767	chr11	-	1690	11	NNC	ENSG00000149557.14	novel	4583	10	NA	NA	0	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.7904954011498	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACACCATGGCACCAG	-125493173	True	NA	NA	False	NA	NA	NA	125496218	125442727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_125442753_125445751_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
WTC11_00015768	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	53.641010660607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-125493220	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
WTC11_00015770	chr11	-	324	3	FSM	ENSG00000149557.14	ENST00000528863.5	365	3	41	0	41	0	multi-exon	FALSE	canonical	3	273	junction_2	10.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAGAGCAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	125454316	125448506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125448568_125452333_125452410_125454129
WTC11_00015772	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-125493232	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125489823_125496120
WTC11_00015776	chr11	-	1830	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_3	25.8499946271217	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTTGTGTTTTTCT	-125901555	True	NA	-3	True	ATTAAA	-19	NA	125903206	125893483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
WTC11_00015777	chr11	-	636	3	FSM	ENSG00000255027.2_ENSG00000110060.9	ENST00000534158.5	605	3	-31	0	-31	0	multi-exon	FALSE	canonical	3	48	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATCCGTATATTGGC	-125901601	True	NA	NA	False	NA	NA	NA	125903252	125895660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125895790_125895906_125896331_125903169
WTC11_00015778	chr11	-	8345	20	FSM	ENSG00000064309.16	ENST00000531738.6	8265	20	-79	-1	-79	1	multi-exon	FALSE	canonical	3	20	junction_19	5.85229078901795	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCTTAAGCTTCTCAA	-126062914	False	NA	-18	True	AATAAA	-24	NA	126062945	125956819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125961106_125961723_125961999_125978303_125978384_125981048_125981330_125983871_125984094_125989636_125989760_125994283_125994390_125994870_125995053_125997206_125997411_126001718_126001851_126003901_126004077_126005758_126006058_126010340_126010695_126015240_126015511_126017087_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126062578
WTC11_00015780	chr11	-	2355	7	FSM	ENSG00000064309.16	ENST00000682556.1	2339	7	0	-16	0	3	multi-exon	FALSE	canonical	3	20	junction_6	7.86694914747063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTATTGACTGTTC	-126062692	False	NA	NA	False	AGTAAA	-42	NA	126062723	126014289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126015511_126017087_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126062578
WTC11_00015781	chr11	-	1924	6	FSM	ENSG00000064309.16	ENST00000682834.1	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	7.75628777186613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGTGTAGCTGCAGAA	-126062675	False	NA	NA	False	NA	NA	NA	126062706	126016280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126062578
WTC11_00015782	chr11	-	2474	8	NNC	ENSG00000165526.9	novel	2468	7	NA	NA	0	18489	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.9032108308393	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTGAAAAGAATGAACTA	-126208292	True	NA	NA	False	AAAAAG	-7	NA	126211630	126183606	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_126183635_126202097_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
WTC11_00015788	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	2	178	junction_10	60.3331971186362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	-126260905	True	NA	-27	True	AATAAA	-14	NA	126268895	126262937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
WTC11_00015792	chr11	-	1107	3	FSM	ENSG00000182934.12	ENST00000528744.5	856	3	0	-251	0	251	multi-exon	FALSE	canonical	3	377	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGGTCCTTTGGCT	-126260930	True	NA	NA	False	NA	NA	NA	126268920	126266922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126267713_126268002_126268087_126268687
WTC11_00015796	chr11	-	4878	9	NIC	ENSG00000134954.14	novel	5139	10	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	36.6331049052629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCTGTGGCTTTGGCT	-128583493	True	NA	-11	True	ATTAAA	-18	NA	128587562	128458768	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_128462577_128463508_128463628_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
WTC11_00015798	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.6645569197687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	-128583473	True	NA	NA	False	AATAAA	-15	NA	128587542	128536411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
WTC11_00015799	chr11	-	6868	11	FSM	ENSG00000134909.19	ENST00000526162.5	6868	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	4.48998886412873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATGGTTTGACTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	128998402	128967924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128971160_128972452_128975003_128976562_128976635_128978769_128978916_128980552_128980749_128981415_128981562_128981828_128981937_128986002_128986086_128986523_128986669_128988022_128988126_128998318
WTC11_00015800	chr11	-	7634	23	NIC	ENSG00000134909.19	novel	10280	23	NA	NA	-283	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	5.20826583978307	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATGGTTTGACTGG	-129278502	True	NA	NA	False	ATTAAA	-20	NA	129279607	128967924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_128971160_128972452_128973433_128974123_128975003_128976562_128976635_128978769_128978916_128980552_128980749_128981415_128981562_128981828_128981937_128986002_128986086_128986523_128986669_128988022_128988126_128998318_128998469_129040927_129041010_129062279_129062358_129063901_129064025_129064840_129064934_129066730_129066869_129093620_129093708_129123445_129123531_129123887_129123930_129124802_129124895_129164318_129164428_129279145
WTC11_00015807	chr11	-	5043	28	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	9	75604	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.9668354645071	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAACCCTCAGAAGAGA	-129892362	True	NA	NA	False	ACTAAA	-28	NA	129895569	129788031	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129788058_129863782_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
WTC11_00015808	chr11	-	5009	27	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	9	71689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3322306461553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATACAGAGCCAGGCAGG	-129892362	True	NA	NA	False	NA	NA	NA	129895569	129791946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129791980_129863779_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
WTC11_00015809	chr11	-	5766	27	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	9	51	intron_retention	FALSE	canonical	3	35	junction_25	34.4672900420128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAATCCCAGCACTTTG	-129892362	True	NA	47	True	NA	NA	NA	129895569	129863584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129893386_129894358_129894439_129895495
WTC11_00015810	chr11	-	5539	28	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	9	51	intron_retention	FALSE	canonical	3	22	junction_25	39.0299030658972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAATCCCAGCACTTTG	-129892362	True	NA	47	True	NA	NA	NA	129895569	129863584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893061_129893386_129894358_129894439_129895495
WTC11_00015811	chr11	-	5168	27	FSM	ENSG00000170322.15	ENST00000682444.1	5173	27	5	0	5	0	multi-exon	FALSE	canonical	3	68	junction_25	28.4252367244362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129892366	True	NA	-4	True	AGTAAA	-18	NA	129895573	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
WTC11_00015818	chr11	-	6308	21	FSM	ENSG00000170325.16	ENST00000360871.8	6305	21	0	-3	0	-2	multi-exon	FALSE	canonical	3	17	junction_8	10.5890273396568	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTATTTTTTTTTCTTTG	-130001672	True	NA	2	True	AATAAA	-42	NA	130002835	129899707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_129902517_129905637_129905742_129910475_129910657_129912084_129912226_129914703_129915019_129915659_129915861_129917126_129917238_129918538_129918719_129923247_129923404_129924881_129925230_129931015_129931259_129932101_129932232_129935100_129935219_129937597_129937671_129942425_129942630_129944770_129945013_129947144_129947371_129955511_129955572_129957745_129957911_129960895_129961083_130002721
WTC11_00015824	chr11	-	1760	2	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGACTATCTCTCTGAT	-130758749	False	NA	NA	False	NA	NA	NA	130758765	130755356	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_130756891_130758539
WTC11_00015825	chr11	-	5053	1	FSM	ENSG00000255455.2	ENST00000525716.2	3994	1	-1146	87	-1146	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTTTTTAAGAATGAAG	-130871378	False	NA	-96	True	AATACA	-23	NA	130871393	130866340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_130866300_130871400
WTC11_00015826	chr11	-	15690	11	FSM	ENSG00000120451.11	ENST00000265909.9	15691	11	1	0	1	0	multi-exon	FALSE	canonical	3	66	junction_5	13.7568164921976	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTCCTAAATTGATT	-130913839	True	NA	-5	True	AGTAAA	-17	NA	130916478	130866249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130914265
WTC11_00015831	chr11	-	897	1	Genic_Genomic	ENSG00000237654.6	novel	NA	NA	NA	NA	-222	-3717	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131541089	131540192	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_131540200_131541100
WTC11_00015838	chr11	-	7369	35	FSM	ENSG00000151503.14	ENST00000534548.7	7369	35	0	0	0	0	multi-exon	TRUE	canonical	2	191	junction_31	26.0551052984003	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGGGTAAAATACTCT	-134219847	True	NA	NA	False	AGTAAA	-15	NA	134223967	134150112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134153053_134153139_134153201_134153288_134153364_134157017_134157096_134157927_134158068_134158328_134158496_134159891_134160075_134161780_134161892_134167995_134168196_134168468_134168603_134168916_134169055_134176306_134176387_134177218_134177458_134178633_134178742_134178821_134178937_134181076_134181185_134184636_134184753_134184902_134185001_134185334_134185527_134192688_134192910_134194015_134194151_134194664_134194739_134202815_134202906_134203141_134203199_134203653_134203907_134204045_134204172_134204898_134204972_134206598_134206733_134208863_134208952_134209144_134209207_134209312_134209478_134210269_134210455_134216935_134217099_134220571_134220727_134223862
WTC11_00015840	chr11	-	343	2	ISM	ENSG00000151503.14	ENST00000691025.1	1568	6	18	4949	18	333	5prime_fragment	FALSE	canonical	3	263	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTGACCACGGTCGC	-134158035	False	NA	NA	False	NA	NA	NA	134158049	134156874	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_134157096_134157927
WTC11_00015841	chr11	-	1958	6	ISM	ENSG00000151503.14	ENST00000530396.2	2427	16	1106	8472	1084	-3890	internal_fragment	FALSE	canonical	3	206	junction_4	11.3736537664903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTACATTGAATATAAA	-134177819	False	NA	NA	False	AATAAA	-11	NA	134177830	134161097	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_134161892_134167995_134168196_134168468_134168603_134168916_134169055_134176306_134176387_134177218
WTC11_00015844	chr11	-	1064	2	FSM	ENSG00000151503.14	ENST00000526422.2	1060	2	13	-17	13	17	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTTTCCAAGAGCATA	-134224377	False	NA	2	True	NA	NA	NA	134224519	134223075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134223483_134223862
WTC11_00015846	chr11	-	1307	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	-3	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	248.124296808407	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238857	True	NA	-18	True	AATAAA	-18	NA	134253352	134248278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
WTC11_00015847	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_7	510.554160712072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238875	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
WTC11_00015848	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	502.289314594244	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238855	True	NA	23	True	AATAAA	-9	NA	134253350	134248287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
WTC11_00015849	chr11	-	1147	6	ISM	ENSG00000151500.15	ENST00000352327.5	835	7	-2	0	0	0	intron_retention	FALSE	canonical	3	401	junction_1	543.328777077011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238857	True	NA	23	True	AATAAA	-9	NA	134253352	134248287	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
WTC11_00015852	chr11	-	658	7	ISM	ENSG00000151500.15	ENST00000392594.7	943	8	6	603	6	0	5prime_fragment	FALSE	canonical	3	277	junction_6	544.795807823649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTGGCCCCTTAAA	-134238869	True	NA	NA	False	NA	NA	NA	134253364	134248881	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
WTC11_00015856	chr11	-	3530	7	FSM	ENSG00000109956.13	ENST00000392580.5	3522	7	0	-8	0	6	multi-exon	FALSE	canonical	0	0	junction_6	0.942809041582063	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCTGCCTTATTTTGT	-134411907	False	NA	-4	True	ATTAAA	-35	NA	134411918	134378497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387695_134387826_134387941_134411806
WTC11_00015857	chr11	+	296	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTACAGTGTTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	5009549	5009845	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_5009500_5009800
WTC11_00015858	chr11	+	283	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCAGTCTTCAGCCGC	NA	False	NA	NA	False	GGGGCT	-16	NA	6072804	6073087	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6072800_6073100
WTC11_00015859	chr11	+	274	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGTCTCAAAAAAAAAAAAAG	6235611	False	NA	NA	False	NA	NA	NA	6235658	6235932	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6235700_6235900
WTC11_00015860	chr11	+	906	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTCGGGCATGTTGAG	NA	False	NA	NA	False	NA	NA	NA	7912739	7913645	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_7912700_7913600
WTC11_00015861	chr11	+	328	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGTCCTGGCTCTTGT	NA	False	NA	NA	False	AAAACA	-31	NA	7913982	7914310	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_7914000_7914300
WTC11_00015862	chr11	+	782	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	8536188	8536970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_8536200_8537000
WTC11_00015863	chr11	+	278	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10270713	10270991	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_10270700_10271000
WTC11_00015864	chr11	+	279	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18755722	18756001	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_18755700_18756000
WTC11_00015865	chr11	+	261	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCGTCCTCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	20570381	20570642	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_20570400_20570600
WTC11_00015866	chr11	+	236	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTTGACCTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	20571157	20571393	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_20571200_20571400
WTC11_00015867	chr11	+	378	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTAGTGAATAAGTCT	NA	False	NA	NA	False	NA	NA	NA	24771396	24771774	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_24771400_24771800
WTC11_00015868	chr11	+	327	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATACATTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	31158089	31158416	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_31158100_31158400
WTC11_00015869	chr11	+	4208	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCAGTTCCTCAGACA	NA	False	NA	NA	False	CATAAA	-5	NA	31442740	31446948	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_31442700_31446900
WTC11_00015870	chr11	+	305	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	667	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATTGATCTTGAATT	NA	False	NA	NA	False	NA	NA	NA	38078052	38078357	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_38078100_38078400
WTC11_00015871	chr11	+	219	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCCTTCCCAGATCTT	42122745	False	NA	NA	False	NA	NA	NA	42122790	42123009	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_42122800_42123000
WTC11_00015872	chr11	+	335	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGGTTCATTTAATTTA	NA	False	NA	NA	False	NA	NA	NA	57086494	57086829	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57086500_57086800
WTC11_00015873	chr11	+	284	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGCTTTTGTATTTGAA	NA	False	NA	NA	False	TATAAA	-12	NA	57087207	57087491	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57087200_57087500
WTC11_00015874	chr11	+	264	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTCATCATCTTAATG	NA	False	NA	NA	False	NA	NA	NA	59564542	59564806	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_59564500_59564800
WTC11_00015875	chr11	+	248	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTGGTCTTCATGGA	NA	False	NA	NA	False	NA	NA	NA	61500772	61501020	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_61500800_61501000
WTC11_00015876	chr11	+	310	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCTTTTAATTACC	NA	False	NA	NA	False	NA	NA	NA	62170968	62171278	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_62171000_62171300
WTC11_00015877	chr11	+	234	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCATTAGGCTCAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	63455997	63456231	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63456000_63456200
WTC11_00015878	chr11	+	272	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGACTTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	63672486	63672758	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63672500_63672800
WTC11_00015879	chr11	+	1740	1	Antisense	novelGene_ENSG00000288852.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGTTAGATTGCACA	NA	False	NA	NA	False	NA	NA	NA	64182995	64184735	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_64183000_64184700
WTC11_00015880	chr11	+	302	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATAACCTTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	65252200	65252502	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_65252200_65252500
WTC11_00015881	chr11	+	428	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATGAAGTCCATA	NA	False	NA	NA	False	NA	NA	NA	70653161	70653589	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_70653200_70653600
WTC11_00015883	chr11	+	1170	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCAAGAAGAACGTAGACA	NA	False	NA	NA	False	AAAAAG	-1	NA	77771702	77772872	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_77771700_77772900
WTC11_00015884	chr11	+	218	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCACGACTGGCAAATTA	94349534	False	NA	NA	False	NA	NA	NA	94349701	94349919	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_94349700_94349900
WTC11_00015885	chr11	+	286	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAGTAAATAAATAATC	94350302	False	NA	NA	False	NA	NA	NA	94350317	94350603	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_94350300_94350600
WTC11_00015887	chr11	+	2715	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTATCCATCTTTTTT	NA	False	NA	28	True	AATAAA	-34	NA	107965447	107968162	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_107965400_107968200
WTC11_00015890	chr11	+	273	1	Antisense	novelGene_ENSG00000255062.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACGAAACCCTGGGAG	NA	False	NA	NA	False	NA	NA	NA	126303071	126303344	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_126303100_126303300
WTC11_00015891	chr11	+	1966	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCCCCACAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	129222826	129224792	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_129222800_129224800
WTC11_00015893	chr11	+	1002	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGGAATGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	130753545	130754547	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_130753500_130754500
WTC11_00015894	chr11	+	3353	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAACTGTTTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	131925383	131928736	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_131925400_131928700
WTC11_00015896	chr11	+	812	2	FSM	ENSG00000255026.1	ENST00000534742.1	812	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCGGGGACCGAGGGGA	287985	False	NA	NA	False	NA	NA	NA	288037	288987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_288812_288949
WTC11_00015897	chr11	+	3909	12	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	109	junction_7	45.4918029125183	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	285565	True	NA	13	True	ATTAAA	-22	NA	289125	295676	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_290076_290389_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00015898	chr11	+	3401	13	ISM	ENSG00000142102.16	ENST00000409548.7	3699	14	433	429	0	0	3prime_fragment	FALSE	canonical	3	70	junction_2	50.3835290546425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	285998	False	NA	15	True	ATTAAA	-24	NA	289558	295678	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00015899	chr11	+	497	1	FSM	ENSG00000270972.1	ENST00000605240.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACCCTAGTCAAAAAATG	333148	False	NA	NA	False	AATAAA	-39	NA	333191	333688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_333200_333700
WTC11_00015900	chr11	+	3634	19	NIC	ENSG00000182272.12	novel	3750	20	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	49.6777268321516	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	367249	True	NA	26	True	AATGAA	-25	NA	369518	382117	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_369955_372108_372213_372661_372755_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
WTC11_00015901	chr11	+	2248	10	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_2	80.2191442930621	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	445981	True	NA	37	True	AATAAA	-39	NA	450337	491399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_450638_460186_460289_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
WTC11_00015903	chr11	+	1623	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	72	junction_4	170.190334625677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557316	True	NA	-33	True	NA	NA	NA	560953	563980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395
WTC11_00015904	chr11	+	1622	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	78	junction_4	167.800476757368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557316	True	NA	-33	True	NA	NA	NA	560953	563980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563479_563557
WTC11_00015905	chr11	+	1543	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	185.60775845853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCTTGAGTGTGTG	557349	True	NA	-1	True	AATAAA	-6	NA	560986	564012	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
WTC11_00015907	chr11	+	5194	18	FSM	ENSG00000070047.13	ENST00000534320.5	5178	18	-16	0	0	0	multi-exon	FALSE	canonical	1	4	junction_15	60.2697511739877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATCTTTAGAAACCT	NA	False	NA	52	True	NA	NA	NA	576469	612043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610666_610762_610953_611083_611633
WTC11_00015908	chr11	+	1389	4	FSM	ENSG00000069696.7	ENST00000176183.6	1399	4	10	0	10	0	multi-exon	FALSE	canonical	2	8	junction_2	3.39934634239519	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTGTGAAGGCTCCTG	NA	False	NA	11	True	ATTAAA	-17	NA	637278	640706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_637590_639432_639546_639647_640307_640400
WTC11_00015909	chr11	+	2592	22	NIC	ENSG00000177106.17	novel	3266	22	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	72.3744044657274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGTATTTTGT	706082	False	NA	18	True	NA	NA	NA	706116	727047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_706289_706673_706802_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
WTC11_00015911	chr11	+	3191	21	FSM	ENSG00000177106.17	ENST00000614442.4	3188	21	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	71.961725938168	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGTGTCTCAGTTCTC	706082	False	NA	16	True	ATTAAA	-19	NA	706116	727726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720548_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
WTC11_00015912	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5.43650214343336	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	776227	True	NA	NA	False	AATACA	-15	NA	777607	784297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_778112_778219_783529_783672_784023
WTC11_00015913	chr11	+	5921	3	NIC	ENSG00000255284.3	novel	610	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	776227	True	NA	NA	False	AATACA	-15	NA	777607	784297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_777696_778112_783672_784023
WTC11_00015916	chr11	+	824	3	FSM	ENSG00000177685.17	ENST00000527089.5	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	35.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGCCTGGGTGAGCC	826529	True	NA	NA	False	NA	NA	NA	827247	828950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_827460_828259_828773_828851
WTC11_00015917	chr11	+	2370	8	NIC	ENSG00000177685.17	novel	1663	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_3	160.780621230499	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	826561	True	NA	4	True	AATAAA	-14	NA	827279	831985	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828229_828773_828851_829184_829359_829541_829985_830133_830249_830714_831223_831296_831534
WTC11_00015918	chr11	+	2166	9	FSM	ENSG00000177685.17	ENST00000525077.2	2166	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	149.459024484974	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	827792	False	NA	5	True	AATAAA	-15	NA	827918	831986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
WTC11_00015920	chr11	+	1841	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	-6	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	94.1949779847685	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	829030	True	NA	11	True	AATAAA	-20	NA	832985	838835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
WTC11_00015921	chr11	+	765	7	ISM	ENSG00000214063.12	ENST00000397397.7	1379	9	-20	1286	8	0	5prime_fragment	FALSE	canonical	3	238	junction_1	183.198207778715	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGACCCCCACCCT	838818	True	NA	NA	False	NA	NA	NA	842831	865825	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693
WTC11_00015923	chr11	+	1274	8	NNC	ENSG00000214063.12	novel	1430	9	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	256.30434714875	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	842966	False	NA	12	True	AATAAA	-12	NA	842984	867109	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_843046_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
WTC11_00015925	chr11	+	4212	22	NIC	ENSG00000174672.16	novel	3211	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	22.3854098904559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	1387992	True	NA	6	True	AATAAA	-14	NA	1389936	1462685	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
WTC11_00015927	chr11	+	805	5	FSM	ENSG00000214026.11	ENST00000429295.1	805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	814.441948514441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTCCTTCTTCTCT	1950823	True	NA	24	True	AATAAA	-29	NA	1950898	1956609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1951022_1952126_1952210_1952781_1952856_1955610_1955782_1956255
WTC11_00015928	chr11	+	313	1	FSM	ENSG00000199550.1	ENST00000362680.1	113	1	-208	8	-208	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCTTTAAAAAAATCAATT	NA	False	NA	NA	False	NA	NA	NA	2372429	2372742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2372400_2372700
WTC11_00015929	chr11	+	3223	16	FSM	ENSG00000053918.18	ENST00000155840.12	3224	16	0	1	0	-1	multi-exon	FALSE	canonical	2	7	junction_11	4.77214137817954	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTATGTCCGTGTACTGA	2444816	True	NA	NA	False	NA	NA	NA	2445007	2849104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2445485_2527927_2528019_2570627_2570755_2571324_2571404_2572012_2572110_2572845_2572987_2583434_2583546_2585211_2585308_2587569_2587693_2588712_2588855_2661960_2662082_2768843_2768920_2775959_2776055_2776985_2777033_2777975_2778038_2847766
WTC11_00015930	chr11	+	1243	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	-18	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_3	27.8702350187436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	2901587	True	NA	-11	True	AATAAA	-2	NA	2902264	2925227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
WTC11_00015931	chr11	+	293	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGGCTGTGAGCTC	3189475	False	NA	NA	False	AATACA	-14	NA	3189545	3189929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3189619_3189709
WTC11_00015935	chr11	+	1798	7	FSM	ENSG00000148985.20	ENST00000396991.6	1798	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	84.5841132968965	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGGGCTCATCTTGT	3808253	False	NA	36	True	AATAAA	-36	NA	3808289	3826370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808316_3811249_3811425_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00015936	chr11	+	1956	8	NIC	ENSG00000148985.20	novel	1963	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	74.8691375341138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	3805408	True	NA	-17	True	NA	NA	NA	3808542	3826317	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3811249_3811425_3822908_3822994_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00015937	chr11	+	1591	5	NIC	ENSG00000148985.20	novel	894	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	74.6537842309417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805408	True	NA	18	True	AATAAA	-18	NA	3808542	3826352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3823882_3824136_3824269_3824365_3825019_3825129_3825327
WTC11_00015939	chr11	+	1986	3	FSM	ENSG00000225101.7	ENST00000641797.3	2200	3	17	197	-1	-197	multi-exon	FALSE	canonical	1	1	junction_2	0.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAACCCTAGACTCTAC	4393674	True	NA	NA	False	NA	NA	NA	4393799	4476204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4394166_4469366_4469544_4474761
WTC11_00015940	chr11	+	1038	2	FSM	ENSG00000197984.4	ENST00000641606.1	1038	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGCAAAGGTGGAAATTC	NA	False	NA	NA	False	AGTAAA	-35	NA	4830174	4833072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4830239_4832098
WTC11_00015942	chr11	+	2862	7	NIC	ENSG00000132274.16	novel	2888	8	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	91.1563065411397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	5688091	True	NA	11	True	AATAAA	-17	NA	5689792	5710863	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5708172_5708274_5708576_5708604_5709052
WTC11_00015943	chr11	+	926	2	FSM	ENSG00000132274.16	ENST00000460454.1	926	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGAAAAGAATCAGGCT	5688119	True	NA	NA	False	AATGAA	-36	NA	5689820	5697013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689900_5696166
WTC11_00015944	chr11	+	423	2	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTGGCTTGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	6069819	6075853	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6070089_6075699
WTC11_00015946	chr11	+	7556	13	NNC	ENSG00000179532.13	novel	14876	43	NA	NA	-754	-11924	intron_retention	FALSE	canonical	3	16	junction_6	9.34523051258412	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTGTCTTTTAAGTAAA	NA	False	NA	11	True	AGTAAA	-24	NA	6496505	6537111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_6498962_6502752_6502927_6508879_6509084_6509161_6509273_6511272_6511430_6519599_6519855_6519964_6520103_6520237_6520290_6528521_6528788_6528877_6529122_6533026_6533185_6533680_6533807_6533896
WTC11_00015949	chr11	+	1896	4	ISM	ENSG00000179532.13	ENST00000254579.11	14876	43	49255	22983	492	0	internal_fragment	FALSE	canonical	2	7	junction_2	3.55902608401044	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	15	True	AATATA	-16	NA	6546534	6549037	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_6547667_6547862_6548041_6548209_6548403_6548644
WTC11_00015950	chr11	+	840	1	FSM	ENSG00000178358.5	ENST00000317834.5	993	1	-39	192	-39	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGTCAGGAATATTCAC	NA	False	NA	NA	False	NA	NA	NA	6920962	6921802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6921000_6921800
WTC11_00015951	chr11	+	4001	7	FSM	ENSG00000170743.17	ENST00000318881.11	4002	7	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	3.0368111930481	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAACCTTGTCTTATTTA	7251607	True	NA	7	True	AGTAAA	-17	NA	7251903	7469042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7252332_7303038_7303391_7313394_7313942_7416041_7416163_7417956_7418129_7420505_7420636_7466791
WTC11_00015952	chr11	+	2942	22	NIC	ENSG00000166387.14	novel	2042	16	NA	NA	66	0	intron_retention	FALSE	canonical	1	2	junction_1	12.4447076421795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7573924	True	NA	14	True	AATAAA	-20	NA	7573970	7653756	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_7574023_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
WTC11_00015953	chr11	+	3991	22	NIC	ENSG00000166387.14	novel	3563	23	NA	NA	130	0	intron_retention	FALSE	canonical	1	1	junction_1	12.6148240910475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7576491	False	NA	14	True	AATAAA	-20	NA	7576537	7653756	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_7577639_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
WTC11_00015954	chr11	+	934	2	FSM	ENSG00000166387.14	ENST00000529664.1	1841	2	907	0	-59	0	multi-exon	FALSE	canonical	3	63	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATCTTTAACTTTGTTG	NA	False	NA	26	True	AATAAA	-32	NA	7651655	7653768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7651845_7653023
WTC11_00015955	chr11	+	1353	5	FSM	ENSG00000175390.15	ENST00000530219.2	1569	5	216	0	216	0	multi-exon	FALSE	canonical	3	2061	junction_2	62.1409687726221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAACGGAGCCTACCTT	7992011	False	NA	-32	True	NA	NA	NA	7992064	7996140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
WTC11_00015957	chr11	+	1278	5	FSM	ENSG00000166452.12	ENST00000309357.8	1232	5	0	-46	0	46	multi-exon	FALSE	canonical	3	9	junction_4	41.5391381711272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTATGGGAAGGTGGC	8911134	False	NA	NA	False	NA	NA	NA	8911153	8920130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8919336
WTC11_00015958	chr11	+	2134	5	NNC	ENSG00000254860.7	novel	1053	5	NA	NA	66	2031	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	4.65698400254929	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAAGAGTGACTC	8965094	False	NA	NA	False	AATAAA	-36	NA	8965113	8979558	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_8965149_8965903_8966045_8966540_8966657_8967838_8968042_8977919
WTC11_00015959	chr11	+	312	3	FSM	ENSG00000205339.10	ENST00000530037.1	347	3	0	35	0	-35	multi-exon	FALSE	canonical	3	216	junction_2	22.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGCAAGTAGTTTTA	9423731	True	NA	46	True	NA	NA	NA	9423785	9425289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9423877_9424913_9424991_9425145
WTC11_00015960	chr11	+	2885	16	NIC	ENSG00000166478.10	novel	2900	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	45.3547008466475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456783	True	NA	20	True	AATACA	-19	NA	9461022	9528524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_9461077_9471305_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
WTC11_00015961	chr11	+	2881	16	NIC	ENSG00000166478.10	novel	2900	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	50.5980236768196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456784	True	NA	20	True	AATACA	-19	NA	9461023	9528524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_9461077_9471305_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
WTC11_00015962	chr11	+	2836	8	ISM	ENSG00000133805.16	ENST00000529507.5	3156	15	33788	-1133	1561	0	3prime_fragment	FALSE	canonical	3	9	junction_3	3.89138242053607	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAATAGTTTAAAACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	10494927	10507579	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
WTC11_00015966	chr11	+	9248	12	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	17.2746410423052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	12669764	True	NA	16	True	AATAAA	-21	NA	12674436	12944737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
WTC11_00015967	chr11	+	2752	19	FSM	ENSG00000133794.20	ENST00000403510.8	2728	19	-25	1	13	0	multi-exon	FALSE	canonical	2	20	junction_4	10.4628974104797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	13276952	True	NA	NA	False	AATAAA	-16	NA	13277764	13387261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
WTC11_00015968	chr11	+	2789	20	FSM	ENSG00000133794.20	ENST00000389707.8	2776	20	-13	0	-5	0	multi-exon	FALSE	canonical	2	14	junction_3	13.2806901666268	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	13276972	True	NA	NA	False	AATAAA	-21	NA	13277784	13387266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
WTC11_00015970	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	25	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	17013762	True	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17014368_17052031
WTC11_00015971	chr11	+	1133	1	FSM	ENSG00000197149.5	ENST00000494359.1	873	1	-218	-42	-218	42	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACACCCAGATCCA	NA	False	NA	NA	False	AATAAA	-20	NA	17228060	17229193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17228100_17229200
WTC11_00015973	chr11	+	1719	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	71.9111200279447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275073	True	NA	NA	False	AATAAA	-14	NA	17276735	17331523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17276849_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00015974	chr11	+	1683	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	61.3966694569678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275089	True	NA	NA	False	AATAAA	-14	NA	17276751	17331523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00015975	chr11	+	1729	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	68.0986679122916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAATAAAGGGAGATAC	17275087	True	NA	NA	False	AATAAA	-16	NA	17276749	17331525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17276829_17282788_17282944_17291239_17291366_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00015976	chr11	+	1643	15	NIC	ENSG00000070081.18	novel	937	8	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	74.448619455135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAATAAAGGGAGATAC	17276977	False	NA	NA	False	AATAAA	-16	NA	17277060	17331525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17277096_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00015978	chr11	+	1887	7	FSM	ENSG00000134333.14	ENST00000227157.8	1887	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	3156.15831880046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCTCATGCCTATA	18286658	True	NA	6	True	ATTAAA	-19	NA	18394585	18408218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18407116
WTC11_00015981	chr11	+	756	1	FSM	ENSG00000279837.1	ENST00000623697.1	768	1	31	-19	31	19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAATTCTCTTAATGAAT	NA	False	NA	NA	False	NA	NA	NA	18601912	18602668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18601900_18602700
WTC11_00015983	chr11	+	2426	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	1181	0	-1181	multi-exon	FALSE	canonical	2	6	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTCTGCTCCAGGAGCA	18698703	True	NA	NA	False	NA	NA	NA	18698778	18703604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18698908_18700932_18701198_18701572
WTC11_00015984	chr11	+	8260	26	NIC	ENSG00000166833.23	novel	5084	28	NA	NA	74	3	intron_retention	FALSE	canonical	3	19	junction_1	10.0164664428131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGCTTGTCTGTGC	NA	False	NA	18	True	AATAAA	-25	NA	20022629	20121604	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_20023133_20035958_20036098_20043980_20044273_20044967_20045671_20048727_20049196_20054079_20054241_20055768_20055958_20062306_20062360_20068185_20068210_20068323_20068399_20077551_20077636_20077992_20078105_20080063_20080210_20083006_20083180_20090864_20091019_20092205_20092369_20093098_20093200_20095671_20095768_20097576_20097746_20100936_20101173_20103254_20103410_20103652_20103725_20105530_20105728_20107663_20107783_20114591_20114796_20118132
WTC11_00015986	chr11	+	2400	19	FSM	ENSG00000165973.19	ENST00000532434.5	2400	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.30188015169021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACGTGATTAAGGATAG	20669555	True	NA	NA	False	NA	NA	NA	20669660	21575067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20669779_20677931_20678061_20783679_20783831_20847582_20847754_20885443_20885541_20918181_20918255_20919251_20919335_20927307_20927443_20928376_20928480_20937785_20937860_20947335_20947436_20960431_20960561_21113588_21113715_21229331_21229455_21370852_21370949_21560188_21560383_21570763_21570941_21573184_21573410_21574971
WTC11_00015989	chr11	+	4925	11	FSM	ENSG00000187398.12	ENST00000620308.1	4981	11	27	29	27	-2	multi-exon	TRUE	canonical	0	0	junction_4	2.53968501984006	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTATTTTTGTTCAATA	NA	False	NA	2	True	AATAAA	-14	NA	24729166	25082602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_24729287_24732117_24732189_24738220_24738303_24763245_24763309_24905990_24906054_24914475_24914539_24976590_24976666_24983125_24983294_25050037_25050131_25077328_25077407_25078553
WTC11_00015990	chr11	+	2207	1	FSM	ENSG00000176971.4	ENST00000318627.4	2976	1	-34	803	-34	-803	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGACATCCTCACAAGAAA	26994066	True	NA	NA	False	NA	NA	NA	26994077	26996284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_26994100_26996300
WTC11_00015991	chr11	+	398	2	Antisense	novelGene_ENSG00000254934.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCCTGGCAATTATT	NA	False	NA	NA	False	NA	NA	NA	27629107	27634912	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_27629335_27634741
WTC11_00015993	chr11	+	4167	7	FSM	ENSG00000169519.21	ENST00000406787.7	4304	7	137	0	-3	0	multi-exon	FALSE	canonical	3	14	junction_1	48.5366413707784	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28107887	True	NA	19	True	AATAAA	-16	NA	28108384	28333507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
WTC11_00015994	chr11	+	5260	7	NNC	ENSG00000169519.21	novel	4304	7	NA	NA	-3	1091	intron_retention	FALSE	canonical	2	4	junction_1	51.2534551680827	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTGTAAAAATCAACCCT	28107887	True	NA	NA	False	NA	NA	NA	28108384	28334598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_28108455_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
WTC11_00015996	chr11	+	781	2	FSM	ENSG00000152219.5	ENST00000532047.1	587	2	0	-194	0	194	multi-exon	FALSE	canonical	3	346	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGACTCCAAGCTACAA	30319025	True	NA	NA	False	AATAAA	-6	NA	30323132	30331596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_30323203_30330885
WTC11_00015997	chr11	+	885	2	FSM	ENSG00000109911.19	ENST00000638764.1	2456	2	-48	1619	-36	-1619	multi-exon	FALSE	canonical	1	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAACTCATTGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	31509718	31510965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31510008_31510369
WTC11_00015998	chr11	+	2416	5	FSM	ENSG00000049449.10	ENST00000533898.5	2416	5	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_4	123.517964280505	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTGTCCTGTGGTGTT	32096518	False	NA	6	True	AATAAA	-20	NA	32096533	32105536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
WTC11_00015999	chr11	+	982	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	-8	4569	-8	-4569	multi-exon	FALSE	canonical	2	4	junction_3	1.74355957741627	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTTATTTGATAGG	32829801	True	NA	NA	False	NA	NA	NA	32829918	32853551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
WTC11_00016000	chr11	+	3306	1	FSM	ENSG00000280798.1	ENST00000631190.1	3306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAAGTGTGTATTTATA	33076135	False	NA	8	True	AATAAA	-15	NA	33076148	33079454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33076100_33079500
WTC11_00016001	chr11	+	602	2	Fusion	ENSG00000241255.1_ENSG00000247151.7	novel	568	3	NA	NA	15	81	multi-exon	FALSE	canonical	2	11	junction_1	0	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCTTATTTGTTTTAA	33161376	True	NA	NA	False	AATAAA	-23	NA	33161671	33237490	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_33161782_33236998
WTC11_00016002	chr11	+	7397	16	FSM	ENSG00000110422.12	ENST00000456517.2	7399	16	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	20.7636434396492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACAGCTTGTTGACTTT	33258317	True	NA	11	True	ATTAAA	-15	NA	33258330	33357018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33258691_33286412_33287512_33328509_33328634_33337074_33337195_33338756_33338844_33339349_33339535_33340967_33341128_33341562_33341687_33347292_33347415_33347628_33347754_33347851_33348014_33348521_33348819_33349146_33349288_33351607_33351844_33352137_33352266_33353091
WTC11_00016003	chr11	+	376	3	FSM	ENSG00000254508.5	ENST00000530352.1	376	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGCATCAGTCACTAAG	33774672	True	NA	NA	False	AATAAA	-20	NA	33774704	33775670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33774752_33775253_33775364_33775451
WTC11_00016005	chr11	+	2161	5	ISM	ENSG00000121691.7	ENST00000241052.5	2291	13	21309	2	-490	-2	3prime_fragment	FALSE	canonical	3	116	junction_1	5.1478150704935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGATGGTATTTTCTTTC	NA	False	NA	7	True	AATAAA	-18	NA	34460242	34472058	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
WTC11_00016006	chr11	+	1330	3	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTATGTTTATTATCT	34691754	True	NA	11	True	AATAAA	-23	NA	34692379	34877679	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_34692890_34754457_34754608_34877009
WTC11_00016007	chr11	+	1475	4	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	9.89949493661167	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTATGTTTATTATCT	34691754	True	NA	11	True	AATAAA	-23	NA	34692379	34877679	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_34692890_34732284_34732430_34754457_34754608_34877009
WTC11_00016008	chr11	+	584	5	FSM	ENSG00000026508.21	ENST00000531873.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.61684396980704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATACCTCTCATTA	NA	False	NA	NA	False	NA	NA	NA	35180278	35211310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35180408_35186831_35186901_35189834_35190066_35209964_35210055_35211245
WTC11_00016011	chr11	+	644	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	-11	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.6733320005331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593869	True	NA	11	True	AATAAA	-18	NA	36594501	36659272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
WTC11_00016012	chr11	+	3276	19	NIC	ENSG00000052841.15	novel	3648	20	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	223.557163954894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTTTGTGAAAATTAT	43352636	True	NA	4	True	AATAAA	-40	NA	43358954	43446541	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43445930
WTC11_00016013	chr11	+	994	4	FSM	ENSG00000149084.13	ENST00000395700.4	994	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	489.795422146385	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGAGTCCTTGTTTT	43668837	True	NA	NA	False	AATAAA	-21	NA	43680780	43755536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43754872
WTC11_00016015	chr11	+	4061	2	FSM	ENSG00000149084.13	ENST00000525736.1	4292	2	231	0	231	0	multi-exon	FALSE	canonical	3	1037	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTGCCCTTTTTTCC	NA	False	NA	29	True	AATAAA	-45	NA	43852277	43856617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43854865_43855143
WTC11_00016016	chr11	+	857	3	FSM	ENSG00000166199.13	ENST00000524742.5	842	3	-15	0	9	0	multi-exon	FALSE	canonical	2	7	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAATTCATGGTTTTT	43880010	True	NA	NA	False	NA	NA	NA	43880839	43883185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43881447_43882582_43882732_43883084
WTC11_00016017	chr11	+	1206	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	20.1919361556609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880032	True	NA	3	True	ATTAAA	-16	NA	43880861	43920266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
WTC11_00016019	chr11	+	915	2	FSM	ENSG00000110455.14	ENST00000531505.1	913	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGGGGCTGGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	44080507	44083270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44081321_44083168
WTC11_00016020	chr11	+	5480	13	FSM	ENSG00000151348.16	ENST00000683299.1	5461	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	168	junction_1	28.6293361587182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	NA	False	NA	NA	False	TATAAA	-23	NA	44107276	44247174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
WTC11_00016021	chr11	+	2312	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.8392398878334	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTAGTCTGGAATGGTAG	44564677	True	NA	4	True	ATTAAA	-14	NA	44565675	44620357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615167_44615268_44615374_44618161_44618366_44618639_44618724_44619048
WTC11_00016022	chr11	+	3999	11	NIC	ENSG00000157570.12	novel	4557	10	NA	NA	13	465	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	20.1633330578057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGCTGGGGTTGTGGG	44724225	True	NA	NA	False	NA	NA	NA	44726974	44931801	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_44727288_44764425_44764513_44860327_44860470_44897751_44897829_44906406_44906480_44909704_44909900_44917971_44918047_44919213_44919313_44919816_44920000_44926673_44926758_44929130
WTC11_00016023	chr11	+	10008	7	NNC	ENSG00000019485.14	novel	652	4	NA	NA	-1894	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	6.59966329107444	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCACTGTTGAATTGCT	45180877	True	NA	4	True	AATAAA	-15	NA	45181022	45235109	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_45181168_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45219569_45219758_45225994
WTC11_00016024	chr11	+	428	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	15	563	-2	0	multi-exon	FALSE	canonical	2	15	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGTGTGTGGTCT	45355385	True	NA	-1	True	AATAAA	-7	NA	45355474	45356648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45355603_45355878_45355926_45356395
WTC11_00016026	chr11	+	2894	14	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	-315	0	intron_retention	FALSE	canonical	0	0	junction_4	275.838173980419	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	45922308	False	NA	22	True	GGGGCT	-43	NA	45922340	45929082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927444_45927594_45927748_45928070_45928176_45928373_45928629
WTC11_00016027	chr11	+	2445	15	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	218.984903030099	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	45915952	True	NA	22	True	GGGGCT	-43	NA	45922655	45929082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
WTC11_00016030	chr11	+	520	5	FSM	ENSG00000157613.11	ENST00000530518.1	528	5	0	8	0	-8	multi-exon	FALSE	canonical	3	7	junction_4	39.378769660821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCAAGCCTGTGCTGAA	NA	False	NA	NA	False	ATTAAA	-7	NA	46311156	46315379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46315170
WTC11_00016031	chr11	+	3468	31	NIC	ENSG00000149091.15	novel	3816	31	NA	NA	348	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	113.113124299919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46333241	False	NA	16	True	AGTAAA	-16	NA	46333252	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46333488_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00016032	chr11	+	3539	31	NIC	ENSG00000149091.15	novel	3512	31	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	126.247028567892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46345171	True	NA	16	True	AGTAAA	-16	NA	46345276	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46345586_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00016033	chr11	+	3375	31	NIC	ENSG00000149091.15	novel	3118	31	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	109.796098898519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	46344498	False	NA	16	True	AGTAAA	-16	NA	46345443	46380551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46345586_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
WTC11_00016034	chr11	+	4258	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	149.372101449227	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	46613959	True	NA	12	True	AATAAA	-18	NA	46617540	46674518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
WTC11_00016037	chr11	+	1190	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	86.9511357027612	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	46933738	True	NA	NA	False	AATACA	-18	NA	46936729	47164385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
WTC11_00016038	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.1870396862601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	47247954	True	NA	-55	True	NA	NA	NA	47248955	47268781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
WTC11_00016039	chr11	+	610	4	FSM	ENSG00000025434.19	ENST00000525441.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	10.5303793326209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTCTGACCGGCTTC	47257576	True	NA	NA	False	NA	NA	NA	47257969	47261421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47261240
WTC11_00016040	chr11	+	5820	33	NIC	ENSG00000110514.19	novel	658	8	NA	NA	118	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	28.0490467473941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47269061	False	NA	15	True	AATAAA	-15	NA	47269810	47330031	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47269907_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00016041	chr11	+	5688	33	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_21	27.8215399634438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	47268692	True	NA	14	True	AATAAA	-14	NA	47270161	47330030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
WTC11_00016044	chr11	+	2285	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-81	-1	intron_retention	FALSE	canonical	3	21	junction_4	65.5447127921086	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGGCTGCCTTGGTTCT	47407448	True	NA	27	True	AATAAA	-11	NA	47408502	47416493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
WTC11_00016050	chr11	+	2643	2	FSM	ENSG00000254602.2	ENST00000530595.1	2790	2	58	89	58	-89	multi-exon	FALSE	canonical	2	3	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCCAGGAGG	57635111	True	NA	NA	False	NA	NA	NA	57638433	57652701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57638673_57650297
WTC11_00016052	chr11	+	833	3	FSM	ENSG00000211450.11	ENST00000388857.8	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	2735	junction_2	125	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACCTTGTCTTTGTCC	57706618	True	NA	6	True	ATTAAA	-15	NA	57741571	57742657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57741718_57741808_57741955_57742116
WTC11_00016053	chr11	+	5705	14	ISM	ENSG00000198561.16	ENST00000529919.5	4780	20	46734	-503	0	0	3prime_fragment	FALSE	canonical	3	77	junction_4	328.481552263616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGGGGGTCTGTGT	57800012	False	NA	20	True	AATAAA	-13	NA	57800023	57818443	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816299
WTC11_00016055	chr11	+	2312	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	0	20	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	4.06885187191123	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCATTTTCATTCTTT	58927357	True	NA	NA	False	AATAAA	-18	NA	58927628	58957063	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
WTC11_00016063	chr11	+	2520	3	FSM	ENSG00000110104.13	ENST00000649393.1	2567	3	47	0	47	0	multi-exon	FALSE	canonical	3	569	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCACGTGTCCAATGG	60846455	False	NA	13	True	AATAAA	-9	NA	60846479	60851076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60848054_60849939_60850015_60850205
WTC11_00016068	chr11	+	1060	6	FSM	ENSG00000149483.13	ENST00000688279.1	1073	6	13	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	66.6861304920296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61359804	True	NA	NA	False	AATAAA	-21	NA	61362373	61369211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044_61366217_61367922_61367999_61368596
WTC11_00016073	chr11	+	896	7	FSM	ENSG00000256591.5	ENST00000544801.5	875	7	-21	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_3	243.792033412816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCACCAGCAGCAGGG	61419031	True	NA	NA	False	GGGGCT	-20	NA	61430104	61484762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61481781_61481919_61482310_61482429_61482654_61482809_61484687
WTC11_00016079	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	62659979	False	NA	21	True	AATAAA	-17	NA	62665335	62665711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62665300_62665700
WTC11_00016080	chr11	+	920	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	68.9975844987828	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62728090	False	NA	21	True	AATATA	-14	NA	62728103	62738636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
WTC11_00016087	chr11	+	1002	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	-16	0	0	0	multi-exon	TRUE	canonical	3	74	junction_2	115.285244068788	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	64221307	True	NA	28	True	AATAAA	-8	NA	64226273	64230007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
WTC11_00016091	chr11	+	1929	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	63.4681343796448	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64284234	True	NA	14	True	AATAAA	-16	NA	64284846	64289491	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
WTC11_00016099	chr11	+	523	4	FSM	ENSG00000149823.9	ENST00000526578.5	534	4	11	0	11	0	multi-exon	FALSE	canonical	1	3	junction_1	194.920496613363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGCGGTGCGCTACCA	65096466	False	NA	NA	False	NA	NA	NA	65096489	65107885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65096653_65096997_65097128_65107580_65107728_65107802
WTC11_00016100	chr11	+	1489	10	NIC	ENSG00000149809.17	novel	1578	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	127.799418457302	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104004	True	NA	20	True	AATGAA	-15	NA	65111874	65116230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65111982_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
WTC11_00016102	chr11	+	1026	7	FSM	ENSG00000204710.2	ENST00000377185.2	991	7	89	-124	89	124	multi-exon	TRUE	canonical	1	1	junction_3	0.74535599249993	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTTAGGTCCTGGCC	65170190	False	NA	NA	False	AATAAA	-21	NA	65170242	65173368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65170262_65171326_65171500_65171942_65172002_65172245_65172332_65172433_65172606_65172683_65173015_65173182
WTC11_00016106	chr11	+	1415	5	FSM	ENSG00000014216.16	ENST00000530567.1	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	59.5671889549943	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65209098	False	NA	21	True	AATAAA	-22	NA	65209143	65212006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65209388_65209848_65210097_65210335_65210453_65210813_65210873_65211259
WTC11_00016108	chr11	+	1780	9	NNC	ENSG00000197847.12	novel	1939	10	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	5.33853912601566	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTCCCATCCCCAATC	65213488	True	NA	-79	True	NA	NA	NA	65213849	65242343	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464_65223581_65233149_65233365_65236408_65236518_65236688_65236889_65241989
WTC11_00016112	chr11	+	833	3	FSM	ENSG00000173727.13	ENST00000619960.4	844	3	11	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	3	1831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATAGCGCCGCGTGTTT	65455156	True	NA	NA	False	AATGAA	-7	NA	65455268	65456318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65455332_65455436_65455582_65455693
WTC11_00016113	chr11	+	2570	18	FSM	ENSG00000142186.18	ENST00000533862.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	113.092912777129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522222	True	NA	14	True	AATAAA	-13	NA	65525111	65538704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65538003_65538183_65538269_65538325_65538441
WTC11_00016114	chr11	+	1169	4	FSM	ENSG00000173465.8	ENST00000533115.5	1077	4	-92	0	24	0	multi-exon	FALSE	canonical	1	1	junction_3	478.247727531338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGCAGCCGGCCCGCGT	65559300	False	NA	NA	False	NA	NA	NA	65570510	65572892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65570756_65570885_65570971_65571390_65571780_65572442
WTC11_00016121	chr11	+	557	2	FSM	ENSG00000213445.10	ENST00000528699.1	548	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	263	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGAACATGTGTC	65649712	False	NA	16	True	AGTAAA	-14	NA	65650272	65650918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65650480_65650568
WTC11_00016122	chr11	+	2633	4	FSM	ENSG00000285533.3	ENST00000654031.1	2628	4	-5	0	1	0	multi-exon	FALSE	canonical	2	10	junction_1	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATATCTGTATCTGTT	65662747	True	NA	-2	True	AATAAA	-5	NA	65663001	65671704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65663149_65663426_65665544_65666130_65666218_65671422
WTC11_00016126	chr11	+	1696	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	-15	0	5	0	multi-exon	FALSE	canonical	2	6	junction_2	3.94669341207154	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	65833813	True	NA	8	True	AATAAA	-20	NA	65833947	65853701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
WTC11_00016129	chr11	+	1657	8	FSM	ENSG00000175513.9	ENST00000532620.5	1925	8	268	0	22	0	multi-exon	FALSE	canonical	2	3	junction_1	8.48046975980333	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	65945481	True	NA	14	True	ATTAAA	-12	NA	65945712	65959963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65945823_65946879_65947017_65947109_65947829_65948000_65948149_65953566_65953738_65958882_65958983_65959189_65959315_65959816
WTC11_00016131	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	65969603	True	NA	26	True	AATAAA	-15	NA	66002479	66004146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66002571_66003625
WTC11_00016133	chr11	+	2868	22	NIC	ENSG00000087365.16	novel	3272	22	NA	NA	0	29	combination_of_known_junctions	TRUE	canonical	3	329	junction_4	412.128675720914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGAGCCTCCCTCAT	66020452	True	NA	53	True	AATAAA	-33	NA	66052363	66068907	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
WTC11_00016139	chr11	+	3349	20	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	0	2	intron_retention	FALSE	canonical	3	38	junction_11	20.2387412701345	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCATCTCCTTTTAGTTC	66544779	True	NA	6	True	AATAAA	-19	NA	66546902	66563328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
WTC11_00016140	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66615334	True	NA	19	True	AATAAA	-15	NA	66616669	66646467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66646026
WTC11_00016142	chr11	+	1691	14	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	44.0639664135524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTCCTCTTCCGCGTCT	66742845	True	NA	24	True	AATAAA	-16	NA	66744772	66843320	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
WTC11_00016143	chr11	+	2032	17	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	52.9616606612746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGCGCTCACCAAGTCCT	66742892	True	NA	13	True	AATAAA	-5	NA	66744819	66843309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
WTC11_00016144	chr11	+	1659	14	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	54.0315489693167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCAAGTCCTCTTCCG	66742892	True	NA	19	True	AATAAA	-11	NA	66744819	66843315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
WTC11_00016145	chr11	+	3242	22	Fusion	ENSG00000173653.8_ENSG00000173715.18	novel	1734	16	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.195278959119	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66742962	False	NA	12	True	ATTAAA	-21	NA	66744889	66846528	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
WTC11_00016146	chr11	+	2479	3	NIC	ENSG00000173621.9	novel	1550	3	NA	NA	-171	-540	intron_retention	FALSE	canonical	3	42	junction_1	99.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAAGCTCAGCCACGTC	66855349	True	NA	NA	False	NA	NA	NA	66856475	66859935	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66857297_66857734_66859094_66859636
WTC11_00016151	chr11	+	5529	8	FSM	ENSG00000175634.15	ENST00000525088.5	5528	8	-1	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	146.697662154626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422122	True	NA	23	True	ATTAAA	-14	NA	67428503	67435401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67429241_67429526_67432658_67432736_67432838_67432951_67433195_67433339_67433448_67433994_67434276_67434376_67434485_67434581
WTC11_00016159	chr11	+	2799	21	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	35.1196170252467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037488	True	NA	7	True	AATAAA	-18	NA	68039064	68050895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68039120_68039791_68039963_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
WTC11_00016160	chr11	+	3102	19	NNC	ENSG00000110719.10	novel	2668	20	NA	NA	-9	0	intron_retention	FALSE	canonical	3	12	junction_14	26.8703448451777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037496	True	NA	7	True	AATAAA	-18	NA	68039072	68050895	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049438_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
WTC11_00016168	chr11	+	2512	14	FSM	ENSG00000132740.10	ENST00000674955.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	30.678134379295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCAGCAGGGACCGGT	68901779	True	NA	NA	False	NA	NA	NA	68903932	68936860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68930322_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
WTC11_00016171	chr11	+	5159	29	FSM	ENSG00000131626.19	ENST00000532504.5	5159	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	90.5658726889901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGCCAATGAAGAATACT	70265921	True	NA	69	True	AATAAA	-17	NA	70270772	70384387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338435_70339170_70339307_70343668_70343893_70348188_70348421_70350993_70351024_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
WTC11_00016176	chr11	+	1310	5	FSM	ENSG00000158483.18	ENST00000526393.5	1295	5	-15	0	4	0	multi-exon	FALSE	canonical	2	4	junction_4	33.9448081449874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTTAACTACAGAGCCAA	71785861	True	NA	NA	False	NA	NA	NA	71787495	71796940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71787633_71789782_71789846_71791735_71791820_71793379_71793482_71796016
WTC11_00016183	chr11	+	4866	29	NIC	ENSG00000165458.15	novel	4789	28	NA	NA	-73	0	combination_of_known_junctions	TRUE	canonical	3	97	junction_1	50.785601265697	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAACCAAAAAAATTAGG	72223829	False	NA	NA	False	AATAAA	-23	NA	72223870	72239147	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_72223961_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
WTC11_00016189	chr11	+	8212	13	NIC	ENSG00000168010.11	novel	3841	16	NA	NA	11	0	intron_retention	FALSE	canonical	3	41	junction_3	16.3171688720807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAAAAAAATGATATCT	72813533	True	NA	-8	True	NA	NA	NA	72814442	72829612	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_72814564_72816727_72816828_72817755_72822296_72822477_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
WTC11_00016192	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	273.309488289172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	73871659	True	NA	34	True	AATAAA	-35	NA	73877027	73927745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
WTC11_00016200	chr11	+	785	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7983.56724779093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275809	True	NA	44	True	AATAAA	-20	NA	75399542	75405692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
WTC11_00016208	chr11	+	1089	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	-5	147642	1	-111616	5prime_fragment	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTCTGTAAGCTGCA	76859486	True	NA	13	True	AATAAA	-17	NA	76860918	76869047	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_76861080_76868119
WTC11_00016221	chr11	+	864	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	-11	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	303.494096592778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	85623485	True	NA	17	True	AATAAA	-31	NA	85628592	85636507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
WTC11_00016240	chr11	+	6627	5	NIC	ENSG00000255666.7	novel	2753	12	NA	NA	0	4554	intron_retention	FALSE	canonical	3	121	junction_1	151.65318163494	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCCCGCTTTTGCT	94632443	True	NA	7	True	NA	NA	NA	94641929	94657438	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_94642158_94647334_94647579_94648259_94648389_94650473_94650538_94651476
WTC11_00016243	chr11	+	7458	5	NNC	ENSG00000255666.7	novel	532	5	NA	NA	-1261	4584	intron_retention	FALSE	canonical	3	131	junction_1	148.673089360516	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGTGTTTTGTCCAA	94646189	False	NA	37	True	AATAAA	-25	NA	94646217	94657468	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_94647247_94647334_94647579_94648259_94648389_94650473_94650538_94651476
WTC11_00016253	chr11	+	2407	7	FSM	ENSG00000137693.14	ENST00000526343.5	2393	7	-14	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	42.405450383438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATACTCTAATATAGATT	102107945	True	NA	-2	True	TATAAA	-16	NA	102110446	102230592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206075_102223621_102223753_102227468_102227582_102229701
WTC11_00016254	chr11	+	5364	8	FSM	ENSG00000137693.14	ENST00000537274.5	5350	8	-14	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	40.2836878922981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102107945	True	NA	0	True	AATATA	-19	NA	102110446	102233423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102223621_102223753_102227468_102227582_102229701
WTC11_00016256	chr11	+	2517	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.1617992842344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344591	True	NA	25	True	AATAAA	-15	NA	102347224	102378670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_102347377_102348597_102348765_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
WTC11_00016260	chr11	+	6557	14	ISM	ENSG00000152578.13	ENST00000282499.10	5506	17	11	44293	11	24687	5prime_fragment	FALSE	canonical	3	14	junction_11	25.5498121208021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTTCCAATAGAACTT	105608900	True	NA	NA	False	AATAAA	-23	NA	105610083	105937797	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105918711_105918919_105924398_105924770_105926740_105926940_105933721
WTC11_00016274	chr11	+	1336	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	9.39081998549647	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	111299623	False	NA	6	True	AATAAA	-18	NA	111299728	111308735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
WTC11_00016281	chr11	+	3744	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5201744180519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072954	True	NA	8	True	AATAAA	-19	NA	112074281	112085150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
WTC11_00016290	chr11	+	1406	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	-60	-894	-29	894	multi-exon	FALSE	canonical	2	8	junction_2	421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATACTTGGATGTTCT	114426021	True	NA	NA	False	NA	NA	NA	114439405	114442796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114439676_114440655_114440740_114441744
WTC11_00016292	chr11	+	935	4	ISM	ENSG00000254851.1	ENST00000528464.1	822	5	974	-255	974	255	3prime_fragment	FALSE	canonical	2	20	junction_3	37.26481808176	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGGCCTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	117136501	117138837	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_117136614_117137422_117137517_117137784_117137903_117138226
WTC11_00016294	chr11	+	1963	4	FSM	ENSG00000149577.16	ENST00000532062.1	2143	4	376	-196	376	30	multi-exon	FALSE	canonical	3	27	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTGTTGAGGATGAGG	NA	False	NA	47	True	NA	NA	NA	117192992	117197475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117193259_117193852_117193964_117195801_117195916_117196003
WTC11_00016304	chr11	+	3227	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	-836	4	-789	0	multi-exon	FALSE	canonical	3	20	junction_1	18.3614503006396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACATATCTCTGCTTCA	118530241	False	NA	14	True	AATAAA	-14	NA	118530251	118535828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
WTC11_00016306	chr11	+	656	2	FSM	ENSG00000149582.16	ENST00000526941.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCGGGCCCAGCATGA	118530407	True	NA	NA	False	NA	NA	NA	118531174	118532370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774
WTC11_00016307	chr11	+	1480	9	FSM	ENSG00000149582.16_ENSG00000172425.12	ENST00000354284.8	1456	9	-24	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.2337593829184	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	118530407	True	NA	NA	False	NA	NA	NA	118531174	118546484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
WTC11_00016312	chr11	+	5003	19	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	106	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_6	69.3123410171951	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118618904	True	NA	15	True	AATAAA	-15	NA	118621468	118658025	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118621539_118624933_118625060_118627307_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
WTC11_00016313	chr11	+	4869	18	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	111	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	60.8393425797512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118618909	True	NA	15	True	AATAAA	-15	NA	118621473	118658025	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118621539_118624933_118625060_118627307_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
WTC11_00016316	chr11	+	5326	8	NIC	ENSG00000186166.9	novel	1119	11	NA	NA	-3466	-57	combination_of_known_junctions	FALSE	canonical	3	134	junction_2	35.9302044502496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAAAGCTAATCATGC	119006053	False	NA	NA	False	AATGAA	-15	NA	119006067	119015584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
WTC11_00016317	chr11	+	1626	7	ISM	ENSG00000186166.9	ENST00000526463.5	1295	11	11582	57	203	-57	3prime_fragment	FALSE	canonical	3	25	junction_4	75.0675621616214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAAAGCTAATCATGC	NA	False	NA	NA	False	AATGAA	-15	NA	119009736	119015584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119014993_119015084_119015306_119015440_119015537
WTC11_00016321	chr11	+	1531	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	0	76200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	170.114967127576	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGGGACTCTAACAGA	119081923	True	NA	NA	False	NA	NA	NA	119084887	119170034	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093548_119169999
WTC11_00016322	chr11	+	1363	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	-16	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	245.702467385533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	119081949	True	NA	5	True	AATAAA	-1	NA	119084913	119093533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
WTC11_00016323	chr11	+	4541	14	FSM	ENSG00000172375.14	ENST00000336702.7	4771	14	0	230	0	-230	multi-exon	FALSE	canonical	2	4	junction_11	4.1595402567987	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTCCCACTTATAAATG	119107244	True	NA	-21	True	NA	NA	NA	119107382	119118314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119108096_119110103_119110200_119110560_119110681_119110846_119110958_119111051_119111169_119111262_119111375_119111520_119111630_119112327_119112393_119112481_119112610_119112699_119112875_119113610_119113713_119113851_119113989_119114079_119114366_119116044
WTC11_00016326	chr11	+	3731	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	-15	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	21.3853532431273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	119167497	True	NA	16	True	ATTAAA	-18	NA	119168712	119184012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
WTC11_00016327	chr11	+	3632	9	NIC	ENSG00000160703.16	novel	3716	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	30.2974833938398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	119167526	True	NA	16	True	ATTAAA	-18	NA	119168741	119184012	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119168895_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
WTC11_00016328	chr11	+	2947	10	NIC	ENSG00000160703.16	novel	3716	10	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	28.7715565991102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	119167578	True	NA	16	True	ATTAAA	-18	NA	119168793	119184012	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
WTC11_00016329	chr11	+	2850	9	FSM	ENSG00000160703.16	ENST00000525863.1	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	25.3152004732335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119171344	False	NA	20	True	ATTAAA	-22	NA	119171355	119184016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
WTC11_00016330	chr11	+	3023	17	FSM	ENSG00000110395.7	ENST00000637974.1	3030	17	0	7	0	-7	multi-exon	TRUE	canonical	0	0	junction_16	36.1850711620138	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTATATCATTCTAGAA	119202958	False	NA	NA	False	AATAAA	-7	NA	119206423	119313919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119206613_119232447_119232696_119271734_119271882_119273867_119274025_119274831_119274954_119275996_119276135_119277756_119277845_119278165_119278298_119278509_119278714_119284968_119285101_119285188_119285567_119287851_119287947_119296917_119297035_119297383_119297482_119298357_119298541_119299494_119299588_119313417
WTC11_00016335	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	120324210	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120325369_120329976
WTC11_00016336	chr11	+	3941	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	-11	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4742552876052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	120324210	True	NA	NA	False	AGTAAA	-16	NA	120325295	120333682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
WTC11_00016338	chr11	+	1911	6	FSM	ENSG00000154114.13	ENST00000524726.1	1913	6	0	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_1	20.8556946659659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTCAGGCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	121035240	121055308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121036315_121036504_121036613_121045673_121045824_121047527_121047668_121053550_121053733_121055051
WTC11_00016341	chr11	+	10667	47	NIC	ENSG00000137642.13	novel	10863	48	NA	NA	11	-71	intron_retention	TRUE	canonical	1	4	junction_22	42.2576040964198	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCTCTGTGTGTCTCG	121445905	True	NA	31	True	AATAAA	-38	NA	121452324	121633692	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121549959_121550089_121550584_121550671_121553936_121554110_121555186_121555319_121557313_121557406_121558590_121558838_121559518_121559658_121566939_121567114_121574240_121574364_121577280_121577401_121583457_121583584_121586221_121586330_121588019_121588152_121589258_121589391_121590039_121590175_121591000_121591157_121595622_121595773_121604192_121604325_121605112_121605240_121605401_121605572_121606844_121606958_121607185_121607291_121608103_121608177_121611075_121611159_121612735_121612833_121614870_121615056_121618773_121618894_121619752_121619918_121621063_121621239_121622161_121622269_121625084_121625278_121627554_121627768_121629495
WTC11_00016346	chr11	+	1564	9	NIC	ENSG00000154144.13	novel	5144	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	73.6213921017526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAATTCTGTTTACTTT	124620266	True	NA	4	True	AATAAA	-7	NA	124622869	124632430	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124623234_124624930_124625002_124625670_124625904_124626692_124626752_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
WTC11_00016347	chr11	+	4839	5	NIC	ENSG00000154144.13	novel	2142	7	NA	NA	3	-4	intron_retention	FALSE	canonical	3	180	junction_4	5.97390157267426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAATTCTGTTTACTTT	124620298	True	NA	4	True	AATAAA	-7	NA	124622901	124632430	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
WTC11_00016348	chr11	+	4782	4	FSM	ENSG00000064199.7	ENST00000532692.1	4949	4	167	0	101	0	multi-exon	FALSE	canonical	3	35	junction_2	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	124673468	False	NA	NA	False	NA	NA	NA	124674010	124697518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124675419_124681388_124681460_124691695_124691783_124694302
WTC11_00016350	chr11	+	3164	5	FSM	ENSG00000245498.7	ENST00000655101.1	3164	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.23606797749979	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAATACCTGGCAAAATA	124800530	False	NA	NA	False	NA	NA	NA	124800690	124809517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124800895_124801983_124802158_124804730_124804849_124805319_124805505_124807034
WTC11_00016353	chr11	+	1752	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	38.2414696370315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTCTGTCTGGTTCT	124875991	True	NA	20	True	AATAAA	-22	NA	124876854	124881472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124877753_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016354	chr11	+	1654	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	36.3594554414667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGCCCTGTCTGTCTGGT	124875992	True	NA	17	True	AATAAA	-19	NA	124876855	124881469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016355	chr11	+	1904	11	ISM	ENSG00000154134.15	ENST00000527196.5	1942	12	737	1	12	-1	3prime_fragment	FALSE	canonical	3	14	junction_3	38.0210468030537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGCCCTGTCTGTCTGGT	124875994	True	NA	17	True	AATAAA	-19	NA	124876857	124881469	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016356	chr11	+	2485	8	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	13	0	intron_retention	FALSE	canonical	3	51	junction_1	22.6778683805536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124875995	True	NA	14	True	AATAAA	-16	NA	124876858	124881466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124878437_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016357	chr11	+	2630	7	NIC	ENSG00000154134.15	novel	2272	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	71	junction_2	16.5730705262081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876000	True	NA	14	True	AATAAA	-16	NA	124876863	124881466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016358	chr11	+	1525	10	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	34.8137903710584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876017	True	NA	14	True	AATAAA	-16	NA	124876880	124881466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124877753_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00016367	chr11	+	1947	11	NIC	ENSG00000110074.12	novel	1951	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	90.7885455330131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126266131	True	NA	10	True	AATACA	-17	NA	126269153	126278126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274930_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
WTC11_00016373	chr11	+	373	2	Fusion	ENSG00000231698.3_ENSG00000182667.15	novel	998	2	NA	NA	-24	19973	multi-exon	FALSE	canonical	2	13	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTTGCTATTGATTTG	131250228	True	NA	NA	False	GGGGCT	-26	NA	131253421	131370890	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_131253592_131370687
WTC11_00016376	chr11	+	2013	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	131.734113058121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250042	True	NA	39	True	AATAAA	-28	NA	134253560	134265855	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
WTC11_00016377	chr11	+	3315	10	FSM	ENSG00000151498.12	ENST00000531338.5	3315	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	185.494800432935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134253064	False	NA	34	True	AATAAA	-23	NA	134256582	134265850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262131_134263556_134264907
WTC11_00016383	chr11	-	2556	2	NNC	ENSG00000230724.9	novel	2553	7	NA	NA	9936	794	intron_retention	TRUE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCAGGAGAATGGCGT	-129042	False	NA	NA	False	NA	NA	NA	129062	126409	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_128777_128873
WTC11_00016384	chr11	-	1145	7	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	66.0925277336419	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGGAGGGGCACAG	NA	False	NA	NA	False	AATGAA	-19	NA	164326	148422	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_148613_150835_150901_153732_153890_159454_159981_161079_161139_163295_163362_164244
WTC11_00016386	chr11	-	977	2	Antisense	novelGene_ENSG00000255026.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTTGTCTTCTTTAAT	-288732	True	NA	-26	True	NA	NA	NA	288995	283080	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_-_283244_288181
WTC11_00016387	chr11	-	723	2	FSM	ENSG00000206013.2	ENST00000382614.2	736	2	14	-1	14	1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTGGCCTCTTTCCT	-299487	False	NA	NA	False	ATTAAA	-20	NA	299512	298198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_298714_299304
WTC11_00016390	chr11	-	1648	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	76.6709690821761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413802	True	NA	-6	True	AATAAA	-17	NA	417359	405715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417324
WTC11_00016391	chr11	-	1518	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	71.9024282182005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413840	True	NA	-6	True	AATAAA	-17	NA	417397	405715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
WTC11_00016393	chr11	-	1498	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	69.0991135977879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATTCTGCTGGGGCC	-413840	True	NA	-18	True	AATAAA	-5	NA	417397	405727	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
WTC11_00016394	chr11	-	2872	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	-5	0	0	multi-exon	FALSE	canonical	2	6	junction_4	8.61240696431655	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTGGCCTCGCTGG	-441686	True	NA	-12	True	AGTAAA	-18	NA	442011	417932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
WTC11_00016396	chr11	-	1169	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	-54	-1	-12	1	multi-exon	FALSE	canonical	3	40	junction_2	101.959142143638	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTCGGCTGAGGGT	NA	False	NA	-4	True	AGTAAA	-19	NA	535592	532240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
WTC11_00016397	chr11	-	2177	15	NIC	ENSG00000185522.9	novel	2057	14	NA	NA	6	-13	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	5.82745087267747	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTCTGTACACCTGAGA	-560125	False	599	-19	True	AGTAAA	-3	NA	560724	554867	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_555112_555304_555504_555733_555931_555995_556116_556191_556376_556491_556589_556834_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_559346_559499_560682
WTC11_00016398	chr11	-	1968	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	-3	7	0	multi-exon	FALSE	canonical	2	36	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTTTTGTTGTTATTT	-567821	True	NA	1	True	TATAAA	-19	NA	568420	565656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_567556_568351
WTC11_00016399	chr11	-	1962	2	FSM	ENSG00000247095.4	ENST00000665964.2	2295	2	32	301	10	-298	multi-exon	FALSE	canonical	2	149	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCGAGTTGCCTCTGCA	-567818	True	NA	NA	False	AAGAAA	-5	NA	568417	565957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_567854_568351
WTC11_00016400	chr11	-	367	2	FSM	ENSG00000247095.4	ENST00000534540.2	966	2	72	527	58	-382	multi-exon	FALSE	canonical	2	34	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGAGGGAGAGGCAGA	-567770	False	NA	NA	False	NA	NA	NA	568369	567525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_567854_568330
WTC11_00016402	chr11	-	1809	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	-2	0	0	multi-exon	FALSE	canonical	2	6	junction_4	22.2299986393651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-615078	False	NA	-1	True	AATAAA	-18	NA	615921	612552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
WTC11_00016403	chr11	-	1882	10	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	21.0296674624267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-614804	False	NA	-3	True	AATAAA	-16	NA	615647	612554	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614532_614796_615008_615096_615260_615344
WTC11_00016405	chr11	-	465	5	FSM	ENSG00000177225.17	ENST00000526650.5	457	5	0	-8	0	0	multi-exon	FALSE	canonical	2	10	junction_1	16.2326830807479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGGTGTTCGCAGCA	-771145	False	NA	-21	True	AATAAA	-23	NA	774026	767219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_767369_771332_771427_772426_772522_773521_773630_774007
WTC11_00016406	chr11	-	578	4	FSM	ENSG00000177542.11	ENST00000532459.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	154.307773261391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGCAGGGAGCGGTGGG	-794605	False	NA	NA	False	NA	NA	NA	796200	794402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_794514_794775_794902_794986_795170_796042
WTC11_00016407	chr11	-	3319	15	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	1	-4	intron_retention	FALSE	canonical	2	45	junction_13	36.0697312189054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCAGAGCTTGATT	-803634	True	NA	-11	True	NA	NA	NA	805229	799188	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_803648_804093_804464_805178
WTC11_00016408	chr11	-	2929	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	0	-5	combination_of_known_junctions	TRUE	canonical	1	7	junction_6	51.1727357964071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCACCTCAGAGCTTGAT	-808737	True	NA	-12	True	NA	NA	NA	809499	799189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_801017_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_809411
WTC11_00016409	chr11	-	3350	13	NIC	ENSG00000177830.18	novel	1477	14	NA	NA	0	54	intron_retention	FALSE	canonical	0	0	junction_11	292.388250257921	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAAAAGCACAGCCCCG	-903359	True	NA	NA	False	NA	NA	NA	910835	867804	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
WTC11_00016412	chr11	-	1414	4	NNC	ENSG00000182208.15	novel	1745	5	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	36.7241972909779	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACGTCTCAGCGTCT	NA	False	NA	-3	True	AATAAA	-23	NA	1480887	1469452	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_1470485_1471294_1471420_1480392_1480487_1480724
WTC11_00016413	chr11	-	2228	10	FSM	ENSG00000250644.3	ENST00000636615.1	2228	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	446.897204188067	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATACCCATGCAGCTCC	-1755188	True	NA	-21	True	NA	NA	NA	1763954	1734820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1735430_1747666_1748120_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
WTC11_00016414	chr11	-	4540	4	FSM	ENSG00000167244.21	ENST00000381395.5	4527	4	-18	5	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTGTTCCACTCT	-2137239	True	NA	0	True	AATAAA	-17	NA	2137308	2129116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2133224_2133516_2133666_2135366_2135530_2137187
WTC11_00016415	chr11	-	1444	2	FSM	ENSG00000183734.5	ENST00000331289.5	1485	2	41	0	41	0	multi-exon	FALSE	canonical	3	7	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCTCCTATCACCTA	-2270508	False	NA	-2	True	AATAAA	-14	NA	2270547	2268497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2269127_2269732
WTC11_00016417	chr11	-	2721	17	NNC	ENSG00000205531.13	novel	2463	16	NA	NA	0	70590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	609.985344982771	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGGCACAGTGGCTCA	-2977108	False	NA	NA	False	NA	NA	NA	2992102	2873840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2873869_2944439_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
WTC11_00016418	chr11	-	1758	4	NIC	ENSG00000129757.15	novel	1773	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	65.7317782101372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGTGCTTGTGCCT	-2885746	False	NA	-1	True	AATAAA	-26	NA	2885760	2883212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_2883911_2883998_2884135_2884669_2885467_2885633
WTC11_00016420	chr11	-	707	4	FSM	ENSG00000205531.13	ENST00000469089.5	707	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	146.870313163991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTTTTTAGGG	-2951224	False	32	NA	False	NA	NA	NA	2951295	2945062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2945647_2949226_2949265_2950968_2951017_2951258
WTC11_00016421	chr11	-	5732	19	FSM	ENSG00000110619.18	ENST00000526890.5	5732	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	181.285907469151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTCTCTGTCTTGTTC	-3049754	True	NA	-10	True	AATAAA	-16	NA	3057380	3000929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3018541_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
WTC11_00016423	chr11	-	586	3	Fusion	ENSG00000255367.3_ENSG00000284639.1	novel	578	3	NA	NA	0	-148	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGCCATTATTGCTCAT	-3580618	False	NA	-8	True	TTTAAA	-5	NA	3581135	3508127	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_3508397_3515090_3515199_3580926
WTC11_00016424	chr11	-	1163	4	FSM	ENSG00000167311.14	ENST00000397067.7	1154	4	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_2	10.6249183003395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	-3641527	True	NA	-4	True	ATTAAA	-27	NA	3641992	3638502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3638920_3639002_3639036_3639845_3640372_3641805
WTC11_00016425	chr11	-	1252	5	FSM	ENSG00000167311.14	ENST00000359918.8	1241	5	0	-11	0	9	multi-exon	FALSE	canonical	1	1	junction_4	12.2754836971909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	NA	False	NA	-4	True	ATTAAA	-27	NA	3642316	3638502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805_3641865_3642177
WTC11_00016426	chr11	-	1367	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	0	9	intron_retention	FALSE	canonical	2	14	junction_1	8.2192186706253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	-3641527	True	NA	-4	True	ATTAAA	-27	NA	3641992	3638502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3638920_3639002_3639036_3639641_3640372_3641805
WTC11_00016427	chr11	-	662	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	3	9	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	11.1455023315337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	-3641524	True	NA	-4	True	ATTAAA	-27	NA	3641989	3638502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3638794_3639002_3639036_3639641_3639796_3641805
WTC11_00016429	chr11	-	1327	3	NNC	ENSG00000177105.10	novel	1295	2	NA	NA	0	3955	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAGAAAGTGGGT	-3836449	True	NA	NA	False	AAAAAG	-2	NA	3840959	3823022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3823056_3826978_3828207_3840893
WTC11_00016430	chr11	-	561	2	FSM	ENSG00000228661.1	ENST00000415809.1	494	2	-75	8	-75	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTACCACTCTCCCGGCT	-3855573	True	NA	NA	False	TATAAA	-20	NA	3855584	3854325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3854659_3855356
WTC11_00016432	chr11	-	686	3	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	34	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGCTGACTCTCT	-5165443	True	NA	-75	True	TATAAA	-16	NA	5165797	5160408	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5163466_5163665_5165557
WTC11_00016433	chr11	-	482	2	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTATCTCCCTTTGCTG	-5165444	True	NA	-82	True	TATAAA	-9	NA	5165798	5160415	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5165557
WTC11_00016436	chr11	-	1337	6	NIC	ENSG00000132256.20	novel	3170	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	63.2582010493501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCTGTTAATTTTTCT	-5683480	True	NA	1	True	AATAAA	-19	NA	5685035	5665419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_5665683_5665980_5666082_5678203_5678435_5679073_5679170_5679760_5680239_5684867
WTC11_00016438	chr11	-	1916	1	FSM	ENSG00000267940.1	ENST00000600308.1	1353	1	-595	32	-595	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTATAATCAATAAATA	NA	False	NA	-35	True	NA	NA	NA	6203848	6201932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6201900_6203800
WTC11_00016439	chr11	-	3386	12	NNC	ENSG00000051009.11	novel	3481	12	NA	NA	8	11	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_11	46.9566355250747	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	-6232354	True	NA	1	True	TATAAA	-25	NA	6234628	6211333	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234566
WTC11_00016440	chr11	-	3280	11	NIC	ENSG00000051009.11	novel	3364	12	NA	NA	8	11	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	38.2073291398391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	-6232354	True	NA	1	True	TATAAA	-25	NA	6234628	6211333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6223079_6223239_6223609_6224249_6224378_6224708_6234543
WTC11_00016442	chr11	-	1654	2	FSM	ENSG00000110171.21	ENST00000533064.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	NA	False	NA	0	True	AATAAA	-15	NA	6450391	6448612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305
WTC11_00016443	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	93.669632218772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	-6476874	True	NA	NA	False	NA	NA	NA	6481324	6476553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
WTC11_00016444	chr11	-	5394	3	FSM	ENSG00000166337.11	ENST00000616342.1	5392	3	0	-2	0	0	multi-exon	FALSE	canonical	3	1303	junction_1	81.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-6610852	False	NA	-15	True	AATAAA	-17	NA	6611948	6606293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6611012_6611188_6611304_6611387
WTC11_00016445	chr11	-	2915	9	FSM	ENSG00000166340.18	ENST00000643516.1	2915	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	86.1042246350317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTCCCAGGTCCTAGC	-6617795	False	NA	-77	True	NA	NA	NA	6618891	6612831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6617300_6617429_6617625_6617777_6618775
WTC11_00016446	chr11	-	2562	4	FSM	ENSG00000149050.10	ENST00000536068.5	2562	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTTATGGACAAAAGCC	-7019724	False	NA	-50	True	NA	NA	NA	7020235	6999362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7001556_7002708_7002852_7019682_7019746_7020072
WTC11_00016448	chr11	-	733	4	FSM	ENSG00000166394.15	ENST00000528585.5	726	4	0	-7	0	3	multi-exon	FALSE	canonical	2	7	junction_1	114.874811086775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGCTCTGTGG	-7666051	False	NA	0	True	AATAAA	-23	NA	7669317	7665096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7667727_7667814_7668477_7668562_7669204
WTC11_00016449	chr11	-	1296	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	60.4823062969659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGAAGTGTGGCTC	-7670972	True	NA	-5	True	AATAAA	-18	NA	7674238	7665101	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
WTC11_00016451	chr11	-	4495	5	NIC	ENSG00000166405.15	novel	2929	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	27	junction_2	14.9080515158756	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	-8167087	True	NA	NA	False	GATAAA	-1	NA	8169002	8108941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8140194_8168865
WTC11_00016452	chr11	-	2503	13	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	17.4547032821147	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTATGTTAACAAG	-8592876	True	NA	-4	True	AATAAA	-22	NA	8594237	8391867	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
WTC11_00016454	chr11	-	2706	1	ISM	ENSG00000166436.17	ENST00000402157.7	10086	22	57123	1	4541	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGTCCTGGAGTGTTTT	-8614718	False	NA	1	True	AATAAA	-25	NA	8614743	8612037	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_8612000_8614700
WTC11_00016455	chr11	-	4275	19	NIC	ENSG00000166444.19	novel	4341	20	NA	NA	0	173	intron_retention	FALSE	canonical	3	7	junction_2	41.9026281623669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGGTCTTAAGAGTTAGA	-8809925	True	NA	NA	False	NA	NA	NA	8810674	8693177	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8694131_8695462_8695550_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8810516
WTC11_00016456	chr11	-	4860	21	NIC	ENSG00000166444.19	novel	4545	23	NA	NA	0	173	intron_retention	FALSE	canonical	3	15	junction_20	52.7837806527725	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGGTCTTAAGAGTTAGA	-8871310	True	NA	NA	False	NA	NA	NA	8871367	8693177	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8811246_8811336_8870953
WTC11_00016457	chr11	-	449	3	FSM	ENSG00000176029.14	ENST00000527607.1	924	3	0	475	0	-475	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCTGACCCCAGTAT	-8932977	True	NA	NA	False	AATAAA	-15	NA	8933006	8929375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8929534_8932141_8932327_8932900
WTC11_00016458	chr11	-	3867	23	FSM	ENSG00000175356.14	ENST00000649792.2	4727	23	0	860	0	55	multi-exon	FALSE	canonical	0	0	junction_6	1.28564869306645	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGCACTATGCTGACTC	-9091584	True	NA	NA	False	NA	NA	NA	9091599	9020335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9021198_9021875_9021956_9025701_9025855_9027363_9027562_9029883_9030046_9030757_9030926_9033625_9033797_9047355_9047563_9047942_9048099_9050605_9050711_9052745_9052833_9053098_9053216_9053636_9053760_9055792_9055910_9059302_9059426_9060407_9060525_9065890_9065981_9066696_9066814_9069369_9069496_9074480_9074616_9079383_9079510_9089706_9089830_9091395
WTC11_00016459	chr11	-	6702	22	FSM	ENSG00000184014.9	ENST00000679446.1	6692	22	0	-10	0	0	multi-exon	FALSE	canonical	3	150	junction_1	32.4526517125273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGAAACAAAAACTGCAT	-9264948	False	NA	NA	False	AATAAA	-3	NA	9264990	9138838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
WTC11_00016461	chr11	-	374	1	FSM	ENSG00000254884.1	ENST00000533804.1	406	1	44	-12	44	12	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTCCTTCCCTCAAG	-9304691	False	NA	NA	False	AATACA	-3	NA	9311645	9311271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9311300_9311600
WTC11_00016463	chr11	-	1102	7	FSM	ENSG00000133812.18	ENST00000687256.1	1124	7	22	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	49.3277023813417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	-10294172	False	NA	-2	True	AATAAA	-21	NA	10294193	10016420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
WTC11_00016464	chr11	-	872	6	FSM	ENSG00000133812.18	ENST00000533661.2	894	6	15	7	6	-7	multi-exon	FALSE	canonical	3	11	junction_1	63.4331143804244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCATGTGACATTTAA	-10044347	True	NA	-49	True	AAAACA	-31	NA	10044600	10016467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
WTC11_00016465	chr11	-	5875	21	NNC	ENSG00000072952.20	novel	2686	21	NA	NA	3145	19313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.4888523390596	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGATTCTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	10690369	10553777	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_10553795_10573092_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965_10626584_10627715_10627761_10627972_10628026_10628750_10628829_10629537_10629712_10631990_10632062_10633967_10634072_10690264
WTC11_00016466	chr11	-	2783	20	FSM	ENSG00000072952.20	ENST00000531107.5	2887	20	104	0	3	0	multi-exon	FALSE	canonical	1	4	junction_14	4.77760240754114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGAGGAAGGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	10652182	10576223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965_10626584_10627715_10627764_10627972_10628026_10628750_10628829_10629537_10629712_10631990_10632062_10633967_10634072_10652024
WTC11_00016468	chr11	-	3877	2	ISM	ENSG00000236287.8	ENST00000533925.5	533	3	20	2676	0	131	5prime_fragment	FALSE	canonical	3	145	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTCTACTCTGCAG	-10854822	True	NA	NA	False	NA	NA	NA	10858053	10852572	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_10856258_10857861
WTC11_00016471	chr11	-	1440	4	NNC	ENSG00000050165.19	novel	1087	3	NA	NA	11	817	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	65.3010124134551	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTCTCAACTGGGCT	-12008299	False	NA	-1	True	AATAAA	-21	NA	12009319	12000857	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_12001773_12002299_12002438_12008369_12008609_12009171
WTC11_00016472	chr11	-	670	2	FSM	ENSG00000254670.1	ENST00000533002.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACATAGCTCCCTTAC	-13009065	True	NA	NA	False	NA	NA	NA	13009159	13001089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13001227_13008626
WTC11_00016473	chr11	-	2109	6	FSM	ENSG00000133818.14	ENST00000526063.5	970	6	0	-1139	0	0	multi-exon	FALSE	canonical	3	18	junction_5	387.629513840213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	-14358465	False	10664	-56	True	NA	NA	NA	14358485	14277963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358256
WTC11_00016475	chr11	-	367	2	FSM	ENSG00000129084.18	ENST00000528018.1	479	2	0	112	0	-112	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATATCTTTGCTTTT	-14643413	True	NA	NA	False	NA	NA	NA	14643635	14610965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14611152_14643454
WTC11_00016476	chr11	-	5460	27	NIC	ENSG00000166689.16	novel	5530	27	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	7.79584170753833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	-17013017	False	NA	-13	True	ATTAAA	-13	NA	17014341	16777296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791203_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
WTC11_00016477	chr11	-	8442	33	FSM	ENSG00000011405.14	ENST00000691414.1	8428	33	0	-14	0	11	multi-exon	FALSE	canonical	3	218	junction_27	44.2123780744714	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCCTTGTTGACATA	-17193645	True	NA	-25	True	AATAAA	-16	NA	17207986	17086560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
WTC11_00016479	chr11	-	512	2	FSM	ENSG00000006071.16	ENST00000683808.1	2852	2	0	2340	0	-2340	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGGATGATTATTTTT	NA	False	NA	NA	False	AATACA	-2	NA	17460834	17453118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17453284_17460487
WTC11_00016480	chr11	-	2130	20	FSM	ENSG00000006611.17	ENST00000526313.5	2149	20	1	18	-1	-13	multi-exon	FALSE	canonical	1	4	junction_6	2.77902711209349	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTCCAGCTTATA	-17544230	True	NA	-17	True	AATAAA	-4	NA	17544401	17493912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
WTC11_00016481	chr11	-	2204	21	FSM	ENSG00000006611.17	ENST00000318024.9	2232	21	15	13	-1	-13	multi-exon	FALSE	canonical	1	4	junction_6	2.87880183409696	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTCCAGCTTATA	-17544230	True	NA	-17	True	AATAAA	-4	NA	17544401	17493912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
WTC11_00016484	chr11	-	1333	11	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	57.7131700740827	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGAATTGTTTTGT	-18011009	True	NA	-7	True	AATAAA	-23	NA	18012924	17788044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
WTC11_00016485	chr11	-	1534	13	NNC	ENSG00000166788.10	novel	1518	12	NA	NA	0	37397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.422299885534	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAACAAGTGTTAGTA	-18100377	True	NA	NA	False	NA	NA	NA	18106071	18032537	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_18032564_18080342_18080492_18081410_18081504_18083534_18083729_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
WTC11_00016488	chr11	-	440	3	FSM	ENSG00000074319.13	ENST00000580814.1	441	3	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCATCAGCTTGTTAT	-18481701	False	30	NA	False	TATAAA	-22	NA	18481731	18469031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18469219_18480484_18480636_18481629
WTC11_00016489	chr11	-	749	6	FSM	ENSG00000074319.13	ENST00000545247.6	783	6	0	34	0	-34	multi-exon	FALSE	canonical	1	1	junction_2	277.061292857736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGACTCATTAAAGAC	-18515537	True	NA	NA	False	NA	NA	NA	18526913	18483869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18484073_18502485_18502578_18514677_18514842_18516098_18516165_18519518_18519604_18526774
WTC11_00016490	chr11	-	245	1	FSM	ENSG00000256464.1	ENST00000540201.1	713	1	-136	604	-136	-604	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACGAAGAGAGAAATCTGC	NA	False	NA	NA	False	NA	NA	NA	18491091	18490846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18490800_18491100
WTC11_00016492	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	16.3033738839542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-18587684	True	NA	NA	False	NA	NA	NA	18588717	18532280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
WTC11_00016494	chr11	-	3106	15	FSM	ENSG00000110786.18	ENST00000396170.5	3871	15	767	-2	-156	0	multi-exon	FALSE	canonical	2	3	junction_11	13.4899811651735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-18791938	False	NA	-1	True	AATAAA	-24	NA	18791954	18727927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772027_18791524
WTC11_00016495	chr11	-	879	5	FSM	ENSG00000254560.6	ENST00000530430.1	879	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.41130192063036	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTATGCTGGTCCATC	-27219900	True	NA	NA	False	NA	NA	NA	27220086	27063019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27219686
WTC11_00016497	chr11	-	352	2	FSM	ENSG00000205213.14	ENST00000527773.1	420	2	0	68	0	-68	multi-exon	FALSE	canonical	3	257	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATATTCATATTTTG	-27385520	False	NA	NA	False	NA	NA	NA	27385532	27384335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27384408_27385252
WTC11_00016498	chr11	-	4909	4	NIC	ENSG00000148943.12	novel	4842	5	NA	NA	19	12	intron_retention	FALSE	canonical	3	635	junction_3	22.553639765383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTTGTGTCCTCTGC	-27490291	True	NA	-1	True	AATAAA	-27	NA	27506750	27494885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_27499569_27501494_27501567_27501801_27501921_27506715
WTC11_00016499	chr11	-	5650	5	NNC	ENSG00000254934.5	novel	798	4	NA	NA	0	4612	at_least_one_novel_splicesite	FALSE	canonical	3	208	junction_2	754.688180641515	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAATCTCACTATGTT	-27634453	False	NA	NA	False	NA	NA	NA	27634627	27613013	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618183_27621289_27621366_27623949_27624146_27634330
WTC11_00016500	chr11	-	5579	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	0	4612	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	882.641615958721	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAATCTCACTATGTT	-27634453	False	NA	NA	False	NA	NA	NA	27634627	27613013	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27621289_27621366_27623949_27624146_27634330
WTC11_00016501	chr11	-	1965	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	1	949	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	894.563953368716	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTCAGATATCTCTT	-27587645	True	NA	-13	True	ATTAAA	-21	NA	27634521	27616676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618179_27621289_27621366_27623949_27624146_27634330
WTC11_00016502	chr11	-	1856	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	46	949	at_least_one_novel_splicesite	FALSE	canonical	3	308	junction_2	800.351728235086	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTCAGATATCTCTT	-27587705	True	NA	-13	True	ATTAAA	-21	NA	27634581	27616676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618019_27618111_27618179_27623949_27624146_27634330
WTC11_00016503	chr11	-	905	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	764.076930390884	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587694	True	NA	-30	True	AATAAA	-16	NA	27634570	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618183_27623949_27624146_27634330
WTC11_00016504	chr11	-	852	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	308	junction_2	783.232759501003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587645	True	NA	-30	True	AATAAA	-16	NA	27634521	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
WTC11_00016505	chr11	-	866	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_1	859.136129428212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587645	True	NA	-30	True	AATAAA	-16	NA	27634521	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618038_27618111_27618179_27623949_27624146_27634330
WTC11_00016506	chr11	-	993	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_1	820	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587694	True	NA	-30	True	AATAAA	-16	NA	27634570	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618183_27623949_27624146_27634330
WTC11_00016507	chr11	-	940	3	NIC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	308	junction_1	858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587645	True	NA	-30	True	AATAAA	-16	NA	27634521	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_27618179_27623949_27624146_27634330
WTC11_00016508	chr11	-	927	5	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	208	junction_2	763.186412352841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587645	True	NA	-30	True	AATAAA	-16	NA	27634521	27617625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618019_27618111_27618183_27621289_27621366_27623949_27624146_27634330
WTC11_00016509	chr11	-	798	4	FSM	ENSG00000254934.5	ENST00000534757.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	948.516502521467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGGATTCAGGAGAAGA	-27634453	False	NA	NA	False	NA	NA	NA	27634627	27617992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27618179_27620756_27620876_27623949_27624146_27634330
WTC11_00016510	chr11	-	4689	1	FSM	ENSG00000176697.20	ENST00000525528.1	4766	1	77	0	77	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	NA	False	NA	NA	False	CATAAA	-2	NA	27659581	27654892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27654900_27659600
WTC11_00016513	chr11	-	805	8	NIC	ENSG00000148950.11	novel	1905	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	102.644224068838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506796	True	NA	-5	True	AATAAA	-15	NA	31509573	31432400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31469739_31469798_31473723_31473787_31509518
WTC11_00016514	chr11	-	895	1	FSM	ENSG00000213713.3	ENST00000527583.1	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTAGGGACATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	33076460	33075565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33075600_33076500
WTC11_00016515	chr11	-	3286	2	FSM	ENSG00000085063.17	ENST00000528987.1	3716	2	430	0	430	0	multi-exon	FALSE	canonical	3	398	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCGAGTGCAATGAATGA	-33719150	False	NA	NA	False	NA	NA	NA	33719181	33708869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369
WTC11_00016517	chr11	-	1680	3	FSM	ENSG00000135363.12	ENST00000395833.7	1687	3	7	0	7	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTTTATTTGAT	-33869798	False	NA	NA	False	AATAAA	-16	NA	33869809	33858575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33859576_33864601_33864818_33869345
WTC11_00016518	chr11	-	431	1	FSM	ENSG00000254708.1	ENST00000531489.1	886	1	351	104	351	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGATTCGTCATAG	NA	False	NA	NA	False	NA	NA	NA	34335652	34335221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34335200_34335700
WTC11_00016519	chr11	-	554	2	FSM	ENSG00000110442.12	ENST00000533643.1	580	2	26	0	26	0	multi-exon	FALSE	canonical	3	323	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCCAGATCCCCCGC	-36276377	False	NA	NA	False	GGGGCT	-34	NA	36276390	36274472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136
WTC11_00016520	chr11	-	575	4	FSM	ENSG00000175104.15	ENST00000529150.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	16.4991582276861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAGCACAGCAGTGCAAT	NA	False	NA	NA	False	NA	NA	NA	36496510	36490376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36496359
WTC11_00016523	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	57.6919405116521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	-45918342	True	NA	-35	True	NA	NA	NA	45918812	45910204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
WTC11_00016524	chr11	-	2150	12	NNC	ENSG00000121680.16	novel	1639	11	NA	NA	-1140	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	56.9757089026427	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	-45919942	False	NA	-35	True	NA	NA	NA	45919952	45910204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699_45918864_45919914
WTC11_00016525	chr11	-	7269	19	NIC	ENSG00000135365.17	novel	3775	21	NA	NA	40	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	19.7519338012481	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGGTGTTGGGTTTGGG	-46119952	True	NA	NA	False	AATAAA	-21	NA	46121414	45929316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45946075_45946099_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971365_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46090454_46090567_46092182_46092224_46120934
WTC11_00016526	chr11	-	2510	5	ISM	ENSG00000135365.17	ENST00000530587.6	3603	19	181200	1080	-39	170	3prime_fragment	FALSE	canonical	3	12	junction_2	28.252212302756	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTCCACAGCCACGAT	NA	False	NA	-15	True	AATATA	-37	NA	45939795	45933660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_45934226_45935120_45935247_45935635_45935740_45936493_45936570_45938156
WTC11_00016527	chr11	-	550	4	ISM	ENSG00000135365.17	ENST00000525676.6	2388	20	182279	0	330	0	3prime_fragment	FALSE	canonical	2	5	junction_2	28.4722086720835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCCAGGTGGCACCAGA	NA	False	NA	NA	False	NA	NA	NA	45936507	45933830	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_45934226_45935120_45935158_45935635_45935740_45936493
WTC11_00016528	chr11	-	3274	12	NIC	ENSG00000175220.12	novel	3395	13	NA	NA	27	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_3	99.1411882449044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-46693101	True	NA	-12	True	AATAAA	-16	NA	46700576	46677079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46679226_46679364_46679469_46679647_46679777_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
WTC11_00016530	chr11	-	7971	38	NIC	ENSG00000134569.10	novel	8155	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_22	19.9058778681934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGCCTGGCTTGGAG	-46916978	True	NA	-7	True	TATAAA	-16	NA	46918550	46856869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886503_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46902782_46902930_46918327
WTC11_00016531	chr11	-	574	2	FSM	ENSG00000270060.1	ENST00000524412.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCCTGGCTCTGCTTT	-47161731	False	NA	NA	False	NA	NA	NA	47169563	47168280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47168587_47169295
WTC11_00016532	chr11	-	1840	11	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	59	junction_10	125.216652247215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47182275	True	NA	-10	True	ATTAAA	-38	NA	47186405	47177521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183066_47186348
WTC11_00016533	chr11	-	4842	16	NIC	ENSG00000149187.19	novel	8132	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	164.616321588515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47535011	True	NA	1	True	ATTAAA	-19	NA	47553140	47465932	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
WTC11_00016536	chr11	-	7792	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	105.256856865288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47534978	True	NA	-3	True	ATTAAA	-15	NA	47553107	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016537	chr11	-	4796	16	NIC	ENSG00000149187.19	novel	8132	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	165.693237305838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47534981	True	NA	-3	True	ATTAAA	-15	NA	47553110	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
WTC11_00016538	chr11	-	7798	14	NIC	ENSG00000149187.19	novel	7666	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	137.519530619382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47534987	True	NA	-3	True	ATTAAA	-15	NA	47553116	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484521_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016539	chr11	-	7848	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_5	117.448263820953	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAACTGATGTCTTCAG	-47535038	True	NA	-10	True	ATTAAA	-8	NA	47553167	47465943	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016540	chr11	-	7913	15	NNC	ENSG00000149187.19	novel	3650	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	157.373288841583	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47534988	True	NA	-3	True	ATTAAA	-15	NA	47553117	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47536619_47536731_47552991
WTC11_00016541	chr11	-	7757	14	NIC	ENSG00000149187.19	novel	7666	13	NA	NA	151	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	144.520754636523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47565165	False	NA	-3	True	ATTAAA	-15	NA	47565354	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47565273
WTC11_00016542	chr11	-	5403	13	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	15	-7	intron_retention	FALSE	canonical	3	162	junction_4	110.047590715209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGGCTCCTGAGCAC	-47534973	True	NA	NA	False	AATAAA	-15	NA	47553102	47468399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016543	chr11	-	2131	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	162	junction_5	116.934463008359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGGCTCCTGAGCAC	-47534988	True	NA	NA	False	AATAAA	-15	NA	47553117	47468399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016544	chr11	-	2119	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	162	junction_5	119.397749079315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGGCTCCTGAGCAC	-47534988	True	NA	NA	False	AATAAA	-15	NA	47553117	47468399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016545	chr11	-	3507	13	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	207	junction_6	90.3156117303217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAGAAAAAAGAAAA	-47534988	True	NA	NA	False	AATAAA	-15	NA	47553117	47470319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
WTC11_00016547	chr11	-	305	2	FSM	ENSG00000165923.17	ENST00000425363.2	305	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCCAATATTATGGCT	-47714877	False	NA	NA	False	NA	NA	NA	47714887	47714312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47714348_47714617
WTC11_00016550	chr11	-	4111	18	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	10	-23	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_7	49.1120461759106	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-47761656	True	NA	-21	True	AATAAA	-20	NA	47767331	47716516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
WTC11_00016553	chr11	-	2771	14	ISM	ENSG00000149150.9	ENST00000528450.5	2358	15	245	-2	-25	0	3prime_fragment	FALSE	canonical	3	61	junction_10	19.3292861165421	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57514191	False	449	-5	True	AATAAA	-16	NA	57514640	57484533	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957
WTC11_00016558	chr11	-	1259	5	FSM	ENSG00000156603.20	ENST00000645681.2	1259	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	213.151354675498	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCAATTTGTCTG	-57708972	True	NA	-79	True	NA	NA	NA	57712214	57703787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57704107_57704301_57704636_57704718_57704816_57704972_57705230_57711962
WTC11_00016563	chr11	-	405	1	FSM	ENSG00000234964.4	ENST00000524732.2	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTCCATCATCAC	NA	False	NA	NA	False	AAAAAG	-4	NA	59781722	59781317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59781300_59781700
WTC11_00016564	chr11	-	2163	9	FSM	ENSG00000110446.12	ENST00000681275.1	2461	9	298	0	-35	0	multi-exon	FALSE	canonical	1	1	junction_1	23.7644692766323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-60951736	False	NA	-1	True	CATAAA	-27	NA	60951782	60937083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60937374_60937515_60937567_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993
WTC11_00016565	chr11	-	3356	18	NIC	ENSG00000167992.14	novel	3536	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	15.4999720950748	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294860	True	NA	-5	True	ATTAAA	-20	NA	61295316	61258285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
WTC11_00016569	chr11	-	2013	10	FSM	ENSG00000011347.10	ENST00000540677.5	2013	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	24.6551524677881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGGGGACAGAGGCCT	-61580695	False	NA	23	True	NA	NA	NA	61580826	61518056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61546030_61546256_61551383_61551464_61556103_61556208_61580789
WTC11_00016571	chr11	-	2093	9	NIC	ENSG00000167994.13	novel	2325	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	14.203322674642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-61917272	True	NA	-5	True	AATAAA	-18	NA	61917553	61897300	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61907392_61907471_61907564_61907661_61908053_61908307_61917356
WTC11_00016572	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_2	7232.84181125695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
WTC11_00016575	chr11	-	2496	9	FSM	ENSG00000254772.10	ENST00000525340.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	10234	junction_8	691.016099667728	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	-62416060	True	NA	-18	True	ATTAAA	-16	NA	62573860	62559602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583
WTC11_00016577	chr11	-	1578	9	NNC	ENSG00000149016.16	novel	2705	9	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	77.336521126826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-62589369	True	NA	NA	False	AATAAA	-17	NA	62591511	62575051	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62575130_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
WTC11_00016578	chr11	-	2015	3	ISM	ENSG00000149541.10	ENST00000265471.10	1452	5	3782	-2	-750	2	3prime_fragment	FALSE	canonical	3	213	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTTGTTTTCCTTTGC	-62618185	False	NA	-25	True	AATAAA	-18	NA	62618204	62615293	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62615800_62616505_62616797_62616986
WTC11_00016579	chr11	-	1096	10	NNC	ENSG00000162191.14	novel	1134	9	NA	NA	0	56798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.984715439533	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTAGGCGTGATGGTG	-62662988	True	NA	NA	False	NA	NA	NA	62679010	62619699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62619725_62676499_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
WTC11_00016580	chr11	-	3899	25	NIC	ENSG00000089597.18	novel	3906	25	NA	NA	1	3	combination_of_known_junctions	TRUE	canonical	3	44	junction_18	362.532632630805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-62629155	True	NA	75	True	AATAAA	-22	NA	62646605	62624822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633268_62633440_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
WTC11_00016584	chr11	-	2973	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	-1	0	-1	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTGGCTGGTTTCT	-62754159	False	NA	-6	True	CATAAA	-26	NA	62754184	62750963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62753716_62753963
WTC11_00016586	chr11	-	485	1	FSM	ENSG00000283268.1	ENST00000636508.1	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACGACCACTCTGGGG	-62832787	False	NA	NA	False	AATAAA	-15	NA	62832803	62832318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62832300_62832800
WTC11_00016589	chr11	-	1049	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	-7	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	68.5865101532364	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTGTGTATGT	-62846358	False	NA	-40	True	AATAAA	-24	NA	62855460	62851979	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00016590	chr11	-	907	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	-10	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3404294270255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTGTGTATGTGT	-62846386	False	NA	-38	True	AATAAA	-26	NA	62855488	62851977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00016591	chr11	-	2328	7	FSM	ENSG00000255717.8	ENST00000662229.1	2309	7	0	-19	0	0	multi-exon	FALSE	canonical	3	178	junction_6	31.2569992161756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTGTGTATGT	-62846735	True	NA	-40	True	AATAAA	-24	NA	62855837	62851979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853591_62853800_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00016592	chr11	-	3138	5	FSM	ENSG00000255717.8	ENST00000663237.1	3119	5	0	-19	0	0	multi-exon	FALSE	canonical	3	178	junction_4	31.6257410980359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTGTGTATGT	-62846745	True	NA	-40	True	AATAAA	-24	NA	62855847	62851979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62855217_62855423
WTC11_00016594	chr11	-	2192	8	FSM	ENSG00000255717.8	ENST00000535689.6	2173	8	0	-19	0	0	multi-exon	FALSE	canonical	3	178	junction_7	29.1092242901715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTGTGTATGT	-62846783	True	NA	-40	True	AATAAA	-24	NA	62855885	62851979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
WTC11_00016597	chr11	-	972	6	NNC	ENSG00000176485.13	novel	1075	5	NA	NA	0	519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	521.50881104733	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTAATTAATGAGAGATG	-63603103	True	NA	NA	False	NA	NA	NA	63614433	63572675	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63572886_63574774_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
WTC11_00016600	chr11	-	5120	3	NIC	ENSG00000188070.9	novel	827	4	NA	NA	117	-3	intron_retention	TRUE	canonical	3	10	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTTTGTGTTTTTTTT	-63765489	False	NA	-3	True	AATAAA	-22	NA	63765835	63759894	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_63764599_63764867_63765255_63765806
WTC11_00016605	chr11	-	1282	12	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	0	21574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.983554025684	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGATTCTGCAAAGTCC	-64162898	True	NA	NA	False	NA	NA	NA	64166113	63976983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63977009_63998557_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
WTC11_00016606	chr11	-	1253	11	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	0	21574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.566059004558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGATTCTGCAAAGTCC	-64162898	True	NA	NA	False	NA	NA	NA	64166113	63976983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63977010_63998557_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64151238_64151356_64152291_64152394_64165696
WTC11_00016610	chr11	-	2221	17	FSM	ENSG00000068831.19	ENST00000377497.7	2221	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	50.6843402221041	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64744623	True	NA	-1	True	AATAAA	-24	NA	64744834	64726910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
WTC11_00016620	chr11	-	4549	12	FSM	ENSG00000162298.19	ENST00000449943.5	4547	12	0	-2	0	0	multi-exon	FALSE	canonical	3	65	junction_2	23.4513739927698	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65130974	True	NA	-29	True	AATAAA	-16	NA	65134487	65127278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65129916_65130001_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
WTC11_00016621	chr11	-	733	8	FSM	ENSG00000162298.19	ENST00000532771.5	709	8	0	-24	0	0	multi-exon	FALSE	canonical	2	3	junction_4	46.9858858529639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTGACTGGTGCCAAGA	-65133405	False	NA	NA	False	NA	NA	NA	65133548	65130970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132731_65132781_65132921_65133075_65133159_65133253_65133469
WTC11_00016622	chr11	-	2304	1	FSM	ENSG00000255200.1	ENST00000534819.1	2354	1	59	-9	59	9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATTAACCCTTTTGA	-65176392	False	NA	NA	False	AATAAA	-35	NA	65176411	65174107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65174100_65176400
WTC11_00016623	chr11	-	4823	28	FSM	ENSG00000168056.18	ENST00000301873.11	4833	28	10	0	10	0	multi-exon	FALSE	canonical	2	5	junction_26	42.0387827994491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGGGCTCCCAGCTTC	-65558269	False	80	-2	True	NA	NA	NA	65558349	65538558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540012_65540154_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
WTC11_00016625	chr11	-	4046	27	FSM	ENSG00000168056.18	ENST00000322147.8	4046	27	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_25	42.6389826360419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAATTGATGTTCACGT	-65557879	False	NA	-4	True	GATAAA	-32	NA	65557959	65538804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
WTC11_00016629	chr11	-	896	3	ISM	ENSG00000173338.13	ENST00000394217.6	1372	4	2059	-4	-418	4	3prime_fragment	FALSE	canonical	1	1	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATTTTCAACTATTTCG	-65593866	False	NA	NA	False	CATAAA	-16	NA	65593937	65592850	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_65593211_65593309_65593384_65593475
WTC11_00016630	chr11	-	3189	10	FSM	ENSG00000173039.20	ENST00000525693.5	3183	10	0	-6	0	4	multi-exon	TRUE	canonical	3	85	junction_3	7.55392139190379	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGCTTTTTTTCAGCAAA	-65660584	True	NA	-17	True	AATAAA	-23	NA	65662895	65653594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
WTC11_00016634	chr11	-	1756	5	FSM	ENSG00000172922.11	ENST00000644142.1	1750	5	0	-6	0	0	multi-exon	FALSE	canonical	1	3	junction_1	164.840074011146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714322	True	NA	-48	True	NA	NA	NA	65720803	65717708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65718823_65719680_65719810_65720044_65720165_65720241_65720418_65720586
WTC11_00016635	chr11	-	1909	4	FSM	ENSG00000172922.11	ENST00000642430.1	1909	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.527195632022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGAGGATGTGACCCC	-65714001	False	NA	-77	True	NA	NA	NA	65720482	65717737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241
WTC11_00016641	chr11	-	2278	5	FSM	ENSG00000172638.13	ENST00000526628.5	2277	5	0	-1	0	0	multi-exon	FALSE	canonical	2	19	junction_1	20.3654118544163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65869572	False	NA	0	True	TATAAA	-21	NA	65869922	65866440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65866809_65867080_65867860_65868057_65868294_65868422_65868509
WTC11_00016642	chr11	-	1225	5	NIC	ENSG00000172638.13	novel	1934	11	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_4	28.2964220353033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAGTGGTTTTCAATCT	-65869158	False	NA	-6	True	TATAAA	-15	NA	65869508	65866446	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869359
WTC11_00016648	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000066	True	NA	0	True	AATAAA	-19	NA	66002156	65996544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
WTC11_00016649	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	43.3008083065432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000067	True	NA	0	True	AATAAA	-19	NA	66002157	65996544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
WTC11_00016650	chr11	-	3759	6	FSM	ENSG00000175376.9	ENST00000312234.6	2887	6	-41	-831	-22	831	multi-exon	FALSE	canonical	3	9	junction_5	44.4414221194597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTACTGCGTAGCTGGGA	-66002187	False	NA	NA	False	NA	NA	NA	66002198	65995713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000477_66001909
WTC11_00016651	chr11	-	2557	1	FSM	ENSG00000174807.4	ENST00000311330.4	2551	1	1	-7	1	7	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACCCCCACTGGTGC	-66316895	True	NA	0	True	AATAAA	-24	NA	66317043	66314486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66314500_66317000
WTC11_00016652	chr11	-	2273	12	FSM	ENSG00000174669.12	ENST00000541567.5	2272	12	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_9	59.3639844066089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66367633	True	NA	-35	True	NA	NA	NA	66371647	66362521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371243_66371326_66371562
WTC11_00016653	chr11	-	2510	13	FSM	ENSG00000174669.12	ENST00000546034.1	2509	13	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_12	59.1227536571158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66372142	False	NA	-35	True	NA	NA	NA	66372214	66362521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371612_66372009
WTC11_00016658	chr11	-	8432	38	NNC	ENSG00000173898.15	novel	11136	38	NA	NA	815	286	intron_retention	FALSE	canonical	3	6	junction_37	23.1948899941509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCTGGTGCACAATTT	-66727358	True	NA	NA	False	AAAAAG	-13	NA	66728401	66684965	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083_66721263_66721349_66721441_66728160
WTC11_00016662	chr11	-	1642	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	-743	0	-28	multi-exon	FALSE	canonical	2	10	junction_3	107.251521615728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCGTCTCAAAAAATAAAAA	-67349128	True	NA	NA	False	NA	NA	NA	67353518	67350804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
WTC11_00016669	chr11	-	1299	3	FSM	ENSG00000110057.8	ENST00000525368.1	529	3	-54	-716	-54	-2	multi-exon	FALSE	canonical	3	219	junction_1	23	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGAGTCCCAGGCCG	-67996005	False	NA	-2	True	AATAAA	-19	NA	67996034	67991101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67991858_67993675_67993795_67995610
WTC11_00016671	chr11	-	1898	13	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	4	27	at_least_one_novel_splicesite	TRUE	canonical	3	77	junction_11	210.35781355163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCAGAAACGAGATCGG	-68116461	True	NA	20	True	ATTAAA	-43	NA	68121384	68053792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68081726_68081849_68097018_68097131_68120827
WTC11_00016672	chr11	-	2684	10	NIC	ENSG00000110066.15	novel	2869	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	11	junction_3	100.700631993799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTCTGAGTCTGGT	-68211754	True	NA	-3	True	AATAAA	-16	NA	68213601	68165717	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68167179_68171014_68171152_68171231_68171297_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
WTC11_00016675	chr11	-	2350	8	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	0	13	intron_retention	FALSE	canonical	3	52	junction_7	43.4295112680259	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTAACTGAAAATGTGT	-68750056	True	NA	-5	True	AATAAA	-32	NA	68751520	68707426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189_68750700_68751419
WTC11_00016677	chr11	-	2811	7	NIC	ENSG00000132749.11	novel	1235	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	59.393228196113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-68750056	True	NA	-1	True	AATAAA	-16	NA	68751520	68736131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
WTC11_00016679	chr11	-	709	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	960	6411	111	0	internal_fragment	FALSE	canonical	3	47	junction_1	71.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	-68750489	False	NA	3	True	ATTAAA	-17	NA	68750500	68744872	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68745112_68747207_68747367_68750189
WTC11_00016680	chr11	-	832	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	-60	8684	0	0	5prime_fragment	FALSE	canonical	3	52	junction_2	69	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-68750056	True	NA	-36	True	ACTAAA	-19	NA	68751520	68747145	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68747367_68750189_68750700_68751419
WTC11_00016681	chr11	-	823	4	ISM	ENSG00000110090.13	ENST00000265641.10	5238	19	72	52297	72	336	5prime_fragment	FALSE	canonical	3	13	junction_2	4.71404520791032	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTAGTGTTCTTGAC	-68840709	True	NA	-2	True	AATAAA	-17	NA	68841844	68807179	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68807639_68812436_68812577_68815333_68815488_68841774
WTC11_00016682	chr11	-	499	4	FSM	ENSG00000110090.13	ENST00000569129.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.41629792788369	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTCACCATGCGCTACT	-68839645	False	NA	NA	False	NA	NA	NA	68839684	68807566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68807639_68812436_68812577_68815333_68815488_68839551
WTC11_00016685	chr11	-	2696	10	FSM	ENSG00000172893.18	ENST00000682708.1	2710	10	14	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_4	387.072041656458	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	-71433337	True	NA	NA	False	ATTAAA	-9	NA	71448421	71434420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71440785_71440837_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
WTC11_00016717	chr11	-	1852	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	-7	0	7	multi-exon	FALSE	canonical	3	145	junction_4	9.52855647145737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATAGTGTTTTGTTTTGT	-77991810	True	NA	NA	False	AATAAA	-24	NA	77994666	77924434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
WTC11_00016731	chr11	-	4113	3	NIC	ENSG00000137504.15	novel	2850	4	NA	NA	0	-3	intron_retention	FALSE	canonical	3	222	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGATTGTTTTATT	-85657366	True	NA	-22	True	AAAACA	-5	NA	85665102	85659710	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85662458_85663523_85663602_85663814
WTC11_00016742	chr11	-	7565	3	FSM	ENSG00000109861.17	ENST00000533865.6	7564	3	0	-1	0	0	multi-exon	FALSE	canonical	3	46	junction_1	966.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311920	True	NA	-21	True	AATAAA	-18	NA	88337736	88326085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88328111_88335083_88337500
WTC11_00016745	chr11	-	598	6	NNC	ENSG00000166012.17	novel	1710	7	NA	NA	-784	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	249.541659848611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGCATGTATTTTTGG	-93725793	False	NA	-12	True	ATTAAA	-23	NA	93733285	93730272	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_93730448_93730676_93730713_93731145_93731217_93731752_93731800_93732243_93732314_93733086
WTC11_00016750	chr11	-	1066	2	FSM	ENSG00000166012.17	ENST00000529900.1	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAAAGACATTTGTAT	-93724776	False	NA	NA	False	ATTAAA	-14	NA	93732268	93730666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93731217_93731752
WTC11_00016758	chr11	-	4471	15	FSM	ENSG00000087053.20	ENST00000675652.1	4474	15	5	-2	5	0	multi-exon	FALSE	canonical	1	1	junction_13	133.458087894626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-95924106	False	NA	-4	True	AATAAA	-18	NA	95924118	95832879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95914241_95914313_95923874
WTC11_00016760	chr11	-	1201	7	NIC	ENSG00000137692.12	novel	12675	8	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	421.289554687615	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCCT	-103064939	True	NA	-18	True	AATAAA	-23	NA	103092177	103062084	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091786
WTC11_00016769	chr11	-	2166	15	NIC	ENSG00000137713.16	novel	5553	15	NA	NA	65	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	157.926568443717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCCTGCATCCTCACT	-111765807	False	163	31	True	NA	NA	NA	111765997	111741321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111765797
WTC11_00016770	chr11	-	553	4	FSM	ENSG00000137713.16	ENST00000531373.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	270.609599895413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGAAGCTTATTTTGT	-111765872	False	NA	NA	False	NA	NA	NA	111766062	111760955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111761052_111764804_111764906_111765293_111765385_111765797
WTC11_00016779	chr11	-	4681	25	NNC	ENSG00000048028.11	novel	4669	25	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	179.587412946701	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865174	True	NA	-2	True	AATAAA	-19	NA	113875488	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113807950_113808137_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
WTC11_00016780	chr11	-	4435	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	144.39706505568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865185	True	NA	-2	True	AATAAA	-19	NA	113875499	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830947_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
WTC11_00016781	chr11	-	4396	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	147.913260543564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865208	True	NA	-2	True	AATAAA	-19	NA	113875522	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113854257_113854336_113875444
WTC11_00016782	chr11	-	4360	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	53	junction_11	138.261916079651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865219	True	NA	-2	True	AATAAA	-19	NA	113875533	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
WTC11_00016783	chr11	-	4679	25	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_23	193.76112423262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-113865214	True	NA	NA	False	NA	NA	NA	113875528	113798091	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830947_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874516_113874880_113875444
WTC11_00016784	chr11	-	1793	15	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	9	-116	combination_of_known_splicesites	FALSE	canonical	3	72	junction_14	142.507518598644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTGTTACTGAATCTT	-113865205	True	NA	NA	False	NA	NA	NA	113875519	113812394	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113875444
WTC11_00016789	chr11	-	6178	25	NIC	ENSG00000160584.17	novel	6364	25	NA	NA	2	-4	combination_of_known_junctions	TRUE	canonical	3	42	junction_5	22.1917151708069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGACCTTTTGTCCTGCC	-117094839	True	NA	-5	True	ATTAAA	-25	NA	117098426	116843405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858520_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
WTC11_00016798	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	-118729395	False	NA	NA	False	NA	NA	NA	118729412	118721103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118722076_118729098
WTC11_00016800	chr11	-	4516	26	NIC	ENSG00000149428.20	novel	4598	26	NA	NA	-8	0	intron_retention	FALSE	canonical	3	224	junction_2	214.523904495513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030778	True	NA	-5	True	AATAAA	-16	NA	119057120	119044187	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
WTC11_00016801	chr11	-	4490	26	NIC	ENSG00000149428.20	novel	4367	26	NA	NA	0	3	intron_retention	FALSE	canonical	3	404	junction_25	161.796781179355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTGAGTTTTTAA	-119030885	True	NA	-2	True	AATAAA	-19	NA	119057227	119044184	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
WTC11_00016810	chr11	-	2301	4	FSM	ENSG00000109971.14	ENST00000532091.1	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_3	2242.67712046711	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAATTGCTTTGAGTCT	-123060415	False	NA	NA	False	AATAAA	-19	NA	123060426	123057495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123059262_123059472_123060029_123060115
WTC11_00016815	chr11	-	640	4	FSM	ENSG00000166261.11	ENST00000525391.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.099368389288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATTGGCATTGACTA	-123737795	True	NA	-16	True	ATTAAA	-17	NA	123741665	123738623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123738911_123740116_123740233_123740416_123740537_123741548
WTC11_00016824	chr11	-	1421	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	-2	0	1	multi-exon	FALSE	canonical	3	21	junction_2	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTTGTGTTTTTCT	-125901570	True	NA	-3	True	ATTAAA	-19	NA	125903221	125893483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125894287_125895223_125895790_125903169
WTC11_00016830	chr11	-	5220	27	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	43.0955316949566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129891230	False	NA	-4	True	AGTAAA	-18	NA	129894437	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893290_129893386_129894358
WTC11_00016831	chr11	-	5185	27	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	41.4417856472563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129891231	False	NA	-4	True	AGTAAA	-18	NA	129894438	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893290_129893386_129894358
WTC11_00016832	chr11	-	5236	27	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_21	41.9356367918277	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129891231	False	NA	-4	True	AGTAAA	-18	NA	129894438	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129884985_129885096_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358
WTC11_00016833	chr11	-	4948	28	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_26	44.5886549264289	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129891231	False	NA	-4	True	AGTAAA	-18	NA	129894438	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129869913_129870179_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358
WTC11_00016834	chr11	-	5254	28	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_25	40.7052370553365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129892327	True	NA	-4	True	AGTAAA	-18	NA	129895534	129863635	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
WTC11_00016839	chr11	-	8722	7	NIC	ENSG00000196323.14	novel	3848	11	NA	NA	30	-6	intron_retention	FALSE	canonical	1	7	junction_2	15.3993145590604	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGAATAAAACTTCCTG	-130314608	False	NA	27	True	ATTAAA	-13	NA	130314878	130226689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_130233383_130234155_130234274_130237009_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
WTC11_00016851	chr11	+	276	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCATGTTGAGTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	7913376	7913652	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_7913400_7913700
WTC11_00016852	chr11	+	419	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCAAATCCTCGAGCTT	NA	False	NA	NA	False	AGTAAA	-22	NA	23888296	23888715	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23888300_23888700
WTC11_00016853	chr11	+	212	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATCTTATTCTCAAAATA	42122325	False	NA	NA	False	AAAAAG	-8	NA	42122370	42122582	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_42122400_42122600
WTC11_00016855	chr11	+	999	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTTGTATTTGAATT	NA	False	NA	NA	False	TATAAA	-14	NA	57086494	57087493	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57086500_57087500
WTC11_00016857	chr11	+	1841	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTCCTGTGTGACAT	63828103	False	NA	9	True	AATAAA	-23	NA	63828114	63829955	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63828100_63830000
WTC11_00016864	chr11	+	3238	14	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_4	67.3116042819209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	285625	True	NA	13	True	ATTAAA	-22	NA	289185	295676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_289240_289794_290076_290389_290601_290677_291114_291954_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
WTC11_00016866	chr11	+	713	2	FSM	ENSG00000185201.18	ENST00000399817.9	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGACTTCACCTGGGG	293864	True	NA	31	True	AATAAA	-20	NA	308105	309397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_308439_309017
WTC11_00016867	chr11	+	843	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	-40	1	-40	0	multi-exon	FALSE	canonical	3	48	junction_1	664.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236402	True	NA	24	True	AATAAA	-16	NA	313999	315271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314673_314810_314921
WTC11_00016868	chr11	+	708	2	FSM	ENSG00000185885.17	ENST00000680696.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314881
WTC11_00016869	chr11	+	704	2	FSM	ENSG00000185885.17	ENST00000681180.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314393_314921
WTC11_00016871	chr11	+	1689	13	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	96	-23	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	63.1771649147591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCCAGCCCTCCCC	450532	False	NA	14	True	AATAAA	-16	NA	450546	491376	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419_490643_491120
WTC11_00016872	chr11	+	3460	3	NNC	ENSG00000254815.6	novel	527	3	NA	NA	-1354	0	intron_retention	FALSE	canonical	1	1	junction_1	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	NA	False	NA	10	True	ATTAAA	-14	NA	556240	560106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_556396_556499_559477_559778
WTC11_00016874	chr11	+	1448	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_4	166.607885467645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557329	True	NA	-33	True	NA	NA	NA	560966	563980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
WTC11_00016876	chr11	+	474	6	FSM	ENSG00000177106.17	ENST00000534755.5	474	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.3316666360283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTCCAAGGAGAAGA	705181	True	NA	NA	False	NA	NA	NA	706200	720135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_708574_708644_709329_709452_709552_709609_710421_710487_720061
WTC11_00016877	chr11	+	2569	21	FSM	ENSG00000177106.17	ENST00000650127.1	2554	21	-15	0	0	0	multi-exon	FALSE	canonical	1	5	junction_20	64.0192158652385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTAAGCAATTAAACCAG	705181	True	NA	-18	True	NA	NA	NA	706200	727692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_727356
WTC11_00016880	chr11	+	769	2	FSM	ENSG00000255284.3	ENST00000530083.2	891	2	4	118	0	-117	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCAGTTTGGGAGG	776197	True	NA	NA	False	AAGAAA	-36	NA	777577	784180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_783529
WTC11_00016881	chr11	+	503	3	NIC	ENSG00000255284.3	novel	610	4	NA	NA	13	-14	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTAAC	776214	True	NA	NA	False	AATACA	-1	NA	777594	784283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_777696_783529_783672_784023
WTC11_00016882	chr11	+	5251	4	NNC	ENSG00000255284.3	novel	610	4	NA	NA	0	637	intron_retention	FALSE	canonical	1	1	junction_2	10.1980390271856	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGGCCAATTGAAAG	776227	True	NA	NA	False	AATAAA	-45	NA	777607	784935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_777696_778116_778219_779522_783672_784023
WTC11_00016885	chr11	+	2150	8	NIC	ENSG00000177685.17	novel	1663	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_1	156.372657978514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	826561	True	NA	4	True	AATAAA	-14	NA	827279	831985	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828229_828773_828851_828964_829359_829541_829985_830133_830249_830714_831223_831296_831534
WTC11_00016886	chr11	+	1685	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	149.720068011713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCGTCCTCCTGGGCCT	826564	True	NA	3	True	AATAAA	-13	NA	827282	831984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828574_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
WTC11_00016889	chr11	+	604	6	FSM	ENSG00000214026.11	ENST00000397297.7	613	6	9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	742.135297637836	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCAGGTGGAGCTGC	1928379	True	NA	NA	False	NA	NA	NA	1947340	1984522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1972558_1972759_1984437
WTC11_00016890	chr11	+	1755	11	FSM	ENSG00000110628.16	ENST00000380574.5	1755	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.406249260355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	2901742	False	NA	8	True	AATAAA	-21	NA	2902419	2925246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2902719_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
WTC11_00016891	chr11	+	2360	5	NIC	ENSG00000223756.8	novel	1244	4	NA	NA	0	1061	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	15.7955689989313	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	3374697	True	NA	16	True	AATAAA	-16	NA	3380992	3399151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116
WTC11_00016892	chr11	+	5418	9	ISM	ENSG00000223756.8	ENST00000690471.1	1600	12	12471	-420	-8327	420	3prime_fragment	FALSE	canonical	3	71	junction_4	31.2827328569612	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTGTGTCCACCGATGT	3393412	False	NA	NA	False	NA	NA	NA	3393431	3409401	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
WTC11_00016893	chr11	+	1674	7	FSM	ENSG00000148985.20	ENST00000532523.5	1696	7	22	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	86.4310900853005	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	3797468	True	NA	0	True	NA	NA	NA	3797934	3826334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00016894	chr11	+	1843	7	NIC	ENSG00000148985.20	novel	1798	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	80.8159775182001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3808132	False	NA	-4	True	NA	NA	NA	3811266	3826330	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3811425_3822908_3822994_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
WTC11_00016895	chr11	+	945	2	FSM	ENSG00000167323.12	ENST00000526156.1	1024	2	79	0	79	0	multi-exon	FALSE	canonical	3	43	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATTAACTGACCAC	NA	False	NA	NA	False	NA	NA	NA	4086283	4091966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4086544_4091281
WTC11_00016896	chr11	+	449	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	9	4	9	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGATCAACTTGATC	4187119	False	NA	NA	False	ATTAAA	-16	NA	4187148	4202651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4187205_4202258
WTC11_00016898	chr11	+	1002	7	FSM	ENSG00000132274.16	ENST00000454828.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	79.2520592091391	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGCTTTTGGTGTC	5688178	True	NA	NA	False	NA	NA	NA	5689879	5709163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689900_5696166_5696656_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
WTC11_00016900	chr11	+	545	1	FSM	ENSG00000180919.3	ENST00000316529.3	1152	1	-59	666	-59	-666	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTCGCCCTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	6107624	6108169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6107600_6108200
WTC11_00016901	chr11	+	8674	21	NNC	ENSG00000179532.13	novel	14876	43	NA	NA	-730	0	intron_retention	FALSE	canonical	2	3	junction_16	11.4581848475227	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	15	True	AATATA	-16	NA	6496529	6549037	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_6497845_6498123_6498962_6502752_6502927_6508879_6509084_6509161_6509273_6511272_6511430_6519599_6519855_6519964_6520103_6520237_6520290_6528521_6528788_6528877_6529122_6533026_6533185_6533680_6533807_6533896_6534174_6538382_6538511_6538611_6538811_6544120_6544247_6544573_6544672_6544791_6547667_6547862_6548403_6548644
WTC11_00016903	chr11	+	1821	4	NNC	ENSG00000179532.13	novel	14876	43	NA	NA	471	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	4.64279609239471	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	15	True	AATATA	-16	NA	6546513	6549037	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_6547667_6547862_6548041_6548209_6548307_6548644
WTC11_00016904	chr11	+	255	1	FSM	ENSG00000178358.5	ENST00000317834.5	993	1	189	549	189	-549	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCATCATGACACAACG	NA	False	NA	NA	False	NA	NA	NA	6921190	6921445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6921200_6921400
WTC11_00016905	chr11	+	3231	25	NIC	ENSG00000166387.14	novel	3328	24	NA	NA	27	0	combination_of_known_junctions	TRUE	canonical	2	11	junction_24	10.4555109073318	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7513652	False	NA	14	True	AATAAA	-20	NA	7513794	7653756	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023_7653201_7653501
WTC11_00016908	chr11	+	562	3	FSM	ENSG00000166387.14	ENST00000534552.1	562	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	NA	False	NA	14	True	AATAAA	-20	NA	7651714	7653756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7651845_7653023_7653201_7653501
WTC11_00016910	chr11	+	502	5	NNC	ENSG00000166441.13	novel	651	5	NA	NA	0	8294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3147.74620760632	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTAGAGCCAGTGTGGC	8682711	True	NA	NA	False	NA	NA	NA	8683214	8698166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677_8685846_8698134
WTC11_00016912	chr11	+	4181	4	FSM	ENSG00000254860.7	ENST00000657967.1	4181	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.94392028877595	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACTCCGTCTCAA	8964053	True	NA	NA	False	NA	NA	NA	8964509	8971123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8965149_8965903_8966045_8966540_8966657_8967838
WTC11_00016918	chr11	+	1476	4	NNC	ENSG00000148926.10	novel	1492	4	NA	NA	2	0	intron_retention	FALSE	canonical	1	11	junction_3	105.931843916528	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	10301054	False	NA	34	True	AATAAA	-16	NA	10305085	10307397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_10305230_10305679_10305799_10305948_10306099_10306334
WTC11_00016919	chr11	+	513	3	FSM	ENSG00000133805.16	ENST00000527261.5	583	3	0	70	0	-54	multi-exon	FALSE	canonical	0	0	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGATGGGCTCTTCTTGG	10308210	False	NA	NA	False	NA	NA	NA	10308312	10410768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10308674_10330569_10330710_10410756
WTC11_00016920	chr11	+	3544	15	FSM	ENSG00000133805.16	ENST00000396553.7	4189	15	172	473	29	88	multi-exon	FALSE	canonical	2	4	junction_1	4.22335585688414	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCATATTGAATAACTAA	10455382	True	NA	-12	True	NA	NA	NA	10455435	10507106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10455449_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
WTC11_00016922	chr11	+	530	4	FSM	ENSG00000133816.18	ENST00000534563.5	536	4	6	0	6	0	multi-exon	TRUE	canonical	1	1	junction_1	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCGAGGGACCTGTGT	12242277	False	NA	NA	False	NA	NA	NA	12242326	12259942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12242433_12256784_12256972_12258467_12258557_12259794
WTC11_00016924	chr11	+	1852	5	FSM	ENSG00000175868.14	ENST00000533448.1	2097	5	-17	262	-17	-262	multi-exon	FALSE	canonical	3	10	junction_4	38.1534729742916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGTTAATTTTGGGAGA	15073161	True	NA	NA	False	NA	NA	NA	15073544	15082080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15080765
WTC11_00016925	chr11	+	1680	12	FSM	ENSG00000188487.12	ENST00000530161.5	1702	12	22	0	22	0	multi-exon	FALSE	canonical	1	2	junction_1	2.13588002263104	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCCTCTGACTATGCAC	NA	False	NA	NA	False	AATACA	-15	NA	15149129	15246076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_15149231_15175740_15176087_15177110_15177164_15178323_15178448_15190700_15190815_15200823_15200950_15221476_15221649_15225649_15225829_15235601_15235669_15238918_15239075_15240446_15240524_15245911
WTC11_00016926	chr11	+	657	1	FSM	ENSG00000197149.5	ENST00000494359.1	873	1	268	-52	268	52	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGATCCATGGCTGGGCA	NA	False	NA	NA	False	AATAAA	-30	NA	17228546	17229203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17228500_17229200
WTC11_00016927	chr11	+	1668	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	62.9378134935345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTTGAAATAAAGGGAG	17275098	True	NA	NA	False	AATAAA	-12	NA	17276760	17331521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17276829_17282788_17282944_17286633_17286714_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
WTC11_00016930	chr11	+	3205	3	FSM	ENSG00000070081.18	ENST00000532240.2	3262	3	0	57	0	-57	multi-exon	FALSE	canonical	1	1	junction_2	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAATGCTGTGCACCA	NA	False	NA	NA	False	CATAAA	-35	NA	17332041	17349923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17334481_17337347_17337535_17349344
WTC11_00016931	chr11	+	6394	1	FSM	ENSG00000260196.1	ENST00000568280.1	2883	1	-5382	1871	-5382	-1871	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAAGTCTGTTTTGCTT	NA	False	NA	NA	False	AGTAAA	-21	NA	17375266	17381660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17375300_17381700
WTC11_00016932	chr11	+	1489	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	102	12512	77	-573	5prime_fragment	FALSE	canonical	3	112	junction_5	19.1143761342085	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTTTCATGTATATGA	18319952	False	NA	NA	False	AATAAA	-35	NA	18322658	18348258	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
WTC11_00016934	chr11	+	1156	3	FSM	ENSG00000134333.14	ENST00000494573.6	1154	3	-2	0	0	0	multi-exon	FALSE	canonical	3	7252	junction_1	899.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAAAATATGTTTGTT	18286633	True	NA	NA	False	NA	NA	NA	18394560	18400360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18399430
WTC11_00016935	chr11	+	1342	7	FSM	ENSG00000134333.14	ENST00000545215.5	1340	7	-2	0	0	0	multi-exon	FALSE	canonical	1	127	junction_2	3285.18699366312	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCCCAGTGAGTCACA	18286633	True	NA	-43	True	NA	NA	NA	18394560	18407642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
WTC11_00016936	chr11	+	1195	8	FSM	ENSG00000166796.12	ENST00000541669.6	2035	8	27	813	14	7	multi-exon	FALSE	canonical	0	0	junction_1	1.48461497791618	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAGTCTCTCAAGATTA	18412326	False	NA	NA	False	AATAAA	-25	NA	18412344	18451250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
WTC11_00016937	chr11	+	215	1	FSM	ENSG00000257043.1	ENST00000537438.1	499	1	425	-141	425	141	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAATCAGTGACACAGA	NA	False	NA	NA	False	NA	NA	NA	18665474	18665689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18665500_18665700
WTC11_00016938	chr11	+	6315	15	FSM	ENSG00000177054.14	ENST00000525490.5	6304	15	-11	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	72.4218086445439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTGACACTTAAC	19111250	True	NA	20	True	AATAAA	-23	NA	19117144	19176422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19170569_19172722_19172821_19175821
WTC11_00016940	chr11	+	749	4	FSM	ENSG00000171714.13	ENST00000683897.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.89897948556636	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTTCTTCCAAGTA	22193190	False	NA	NA	False	NA	NA	NA	22193206	22221421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096
WTC11_00016941	chr11	+	2139	8	FSM	ENSG00000148935.12	ENST00000454584.7	2236	8	91	6	91	-1	multi-exon	FALSE	canonical	0	0	junction_7	2.71052370871575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATCTGTCTCTAAATC	NA	False	NA	NA	False	ATTAAA	-17	NA	22666701	22812995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22666900_22674849_22675015_22685667_22685790_22726291_22726434_22737704_22737769_22749119_22749262_22755845_22755954_22811797
WTC11_00016942	chr11	+	398	2	Antisense	novelGene_ENSG00000254934.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCCTGGCAATTATT	NA	False	NA	NA	False	NA	NA	NA	27629107	27634912	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_27629404_27634810
WTC11_00016943	chr11	+	750	1	Genic_Genomic	ENSG00000245573.9	novel	NA	NA	NA	NA	20315	368	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGATGCAAGTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	27696040	27696790	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_27696000_27696800
WTC11_00016944	chr11	+	6413	6	NIC	ENSG00000169519.21	novel	4208	7	NA	NA	-23	2374	intron_retention	FALSE	canonical	0	0	junction_4	60.950471696288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTTGGGTGTTCTTT	28107867	True	NA	NA	False	AATAAA	-16	NA	28108364	28335881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28296752_28296932_28330395
WTC11_00016945	chr11	+	2057	3	NIC	ENSG00000152219.5	novel	2373	4	NA	NA	0	202	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	125	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATAAATAAATTTTTTG	30319025	True	NA	-18	True	AATACA	-1	NA	30323132	30338425	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_30323203_30332865_30332994_30336566
WTC11_00016946	chr11	+	233	2	FSM	ENSG00000152219.5	ENST00000533457.1	233	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGAGAAAAAAGAAGG	30327536	False	NA	NA	False	NA	NA	NA	30331643	30332941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_30331801_30332865
WTC11_00016947	chr11	+	1229	12	NNC	ENSG00000149100.13	novel	5047	11	NA	NA	0	53992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	793.903370684034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGGATCCAGTTAACCA	32548788	True	NA	NA	False	NA	NA	NA	32583883	32660256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278_32602473_32660229
WTC11_00016948	chr11	+	356	1	FSM	ENSG00000244535.1	ENST00000466686.1	347	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGAAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	32758258	32758614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32758300_32758600
WTC11_00016950	chr11	+	2633	10	FSM	ENSG00000176148.16	ENST00000432887.5	2633	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.3279555898864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCAGATAAA	33040001	False	NA	21	True	ATTAAA	-14	NA	33040014	33073563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
WTC11_00016951	chr11	+	582	3	FSM	ENSG00000247151.7	ENST00000531870.5	568	3	-14	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATACAGACACATGGC	33161347	True	NA	NA	False	NA	NA	NA	33161642	33190294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33161782_33188769_33188851_33189932
WTC11_00016952	chr11	+	2401	14	NIC	ENSG00000121691.7	novel	2291	13	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	37.5373581174524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGTATTTTCTTTCT	34437539	True	NA	8	True	AATAAA	-19	NA	34438894	34472059	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34457775_34457848_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
WTC11_00016953	chr11	+	1360	6	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_3	9.46572765295939	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAAATGTCCCTATGTT	34692747	False	NA	3	True	AATAAA	-15	NA	34692778	34877671	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_34692890_34714693_34714808_34715056_34715235_34732284_34732430_34754457_34754608_34877009
WTC11_00016954	chr11	+	315	1	FSM	ENSG00000271369.1	ENST00000605070.1	562	1	7	240	7	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGGACAAGTATAT	NA	False	NA	NA	False	NA	NA	NA	34709606	34709921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34709600_34709900
WTC11_00016956	chr11	+	581	5	NNC	ENSG00000179241.13	novel	3814	6	NA	NA	14	41978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.9368351019566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCTCAGGGAACACTCT	35941488	True	NA	NA	False	NA	NA	NA	35944075	36274114	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36274010
WTC11_00016957	chr11	+	3879	10	FSM	ENSG00000135362.14	ENST00000378867.7	3930	10	51	0	18	0	multi-exon	FALSE	canonical	0	0	junction_1	2.330686329267	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATTCTCATGCTGGGTG	36376045	False	NA	NA	False	AATAAA	-20	NA	36376055	36465204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36376159_36376628_36376705_36400996_36401286_36403297_36403379_36419254_36419304_36431852_36431911_36437384_36437477_36446299_36446441_36451208_36451336_36462341
WTC11_00016960	chr11	+	1395	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	24	45097	2	0	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	43352637	True	NA	20	True	TATAAA	-32	NA	43358955	43401622	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
WTC11_00016963	chr11	+	2352	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	-2	33	-2	-18	multi-exon	FALSE	canonical	1	1	junction_8	5.57005477568054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAGAAAAATAAAAAAAAGT	44066244	True	NA	-29	True	NA	NA	NA	44066267	44084204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
WTC11_00016964	chr11	+	1234	5	FSM	ENSG00000110455.14	ENST00000531940.1	1234	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	2.6809513236909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGGAAAGGTGAGGC	44074597	False	NA	NA	False	NA	NA	NA	44074629	44079607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44074682_44075525_44075593_44077278_44077377_44077844_44078785_44079530
WTC11_00016965	chr11	+	638	5	FSM	ENSG00000157570.12	ENST00000520245.5	981	5	343	0	343	0	multi-exon	FALSE	canonical	3	53	junction_1	6.86931583201704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGCCATCAGAGATGG	44917894	False	NA	NA	False	NA	NA	NA	44917924	44929280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44918047_44919213_44919313_44919816_44920000_44926673_44926758_44929130
WTC11_00016967	chr11	+	3116	12	FSM	ENSG00000121653.11	ENST00000395629.2	3180	12	64	0	64	0	multi-exon	FALSE	canonical	1	2	junction_1	44.4981195628321	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	45896596	True	NA	13	True	ATTAAA	-20	NA	45896613	45906465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45896951_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
WTC11_00016968	chr11	+	2794	14	NNC	ENSG00000165905.18	novel	2459	15	NA	NA	-342	0	intron_retention	TRUE	canonical	0	0	junction_4	287.262266000001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	45922281	False	NA	22	True	GGGGCT	-43	NA	45922313	45929082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927444_45927594_45927919_45928070_45928176_45928373_45928584
WTC11_00016969	chr11	+	561	3	FSM	ENSG00000157613.11	ENST00000534787.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCACCACCCCGCTGC	46295078	False	NA	NA	False	NA	NA	NA	46295125	46307939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46295334_46299934_46300164_46307815
WTC11_00016986	chr11	+	5207	18	NIC	ENSG00000198561.16	novel	6016	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	271.521587205031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGGGGGTCTGTGT	57748973	True	NA	20	True	AATAAA	-13	NA	57761867	57818443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_57762047_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816299
WTC11_00016987	chr11	+	6509	16	ISM	ENSG00000288534.1	ENST00000673781.1	5179	19	77971	-904	77788	730	3prime_fragment	FALSE	canonical	3	65	junction_1	199.498103583301	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATAGCTGCTCCTGAT	57790512	False	NA	-12	True	ATTAAA	-1	NA	57790552	57819161	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_57791674_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
WTC11_00016988	chr11	+	369	1	FSM	ENSG00000280010.1	ENST00000625104.1	1094	1	459	266	459	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAAGAATGAGCTCTCT	58627878	False	NA	NA	False	NA	NA	NA	58627893	58628262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_58627900_58628300
WTC11_00016989	chr11	+	485	3	FSM	ENSG00000166840.14	ENST00000534674.5	468	3	-17	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_1	1	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTATTATCCGGCCTC	NA	False	NA	NA	False	NA	NA	NA	58905380	58947937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_58905662_58943542_58943667_58947857
WTC11_00016990	chr11	+	6172	5	FSM	ENSG00000166801.17	ENST00000528737.5	6189	5	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	34.5723878261251	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTATTTGTCAGCCTCTTT	59142478	True	NA	34	True	ATTAAA	-18	NA	59142764	59155039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59142947_59143082_59143305_59143496_59145857_59148835_59148954_59151749
WTC11_00016992	chr11	+	3996	6	FSM	ENSG00000166801.17	ENST00000675163.1	3989	6	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.4125724840216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTATTTGTCAGCCTCTTT	59142562	False	NA	34	True	ATTAAA	-18	NA	59142848	59155039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59142947_59143082_59143305_59143496_59143696_59145826_59145857_59148796_59148954_59151749
WTC11_00016995	chr11	+	801	4	FSM	ENSG00000255139.2	ENST00000531108.1	440	4	-35	-326	-35	7	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAATAAACATGGTAT	59616375	False	NA	NA	False	AATAAA	-4	NA	59616393	59639868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59616475_59620414_59620473_59635419_59635533_59639319
WTC11_00016996	chr11	+	5936	10	NIC	ENSG00000006118.15	novel	3498	11	NA	NA	0	0	intron_retention	TRUE	canonical	3	88	junction_4	42.4249518940196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	60923153	True	NA	18	True	AATAAA	-18	NA	60924491	60937159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
WTC11_00016997	chr11	+	597	5	FSM	ENSG00000149476.16	ENST00000533393.1	597	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	68.75681784376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTGGGCAGCATCCTGG	61331948	True	NA	NA	False	NA	NA	NA	61333279	61339123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61333330_61334619_61334732_61336203_61336391_61337940_61338131_61339065
WTC11_00016999	chr11	+	2234	1	FSM	ENSG00000279246.1	ENST00000623765.1	2234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAATATTATCC	NA	False	NA	NA	False	NA	NA	NA	61352243	61354477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61352200_61354500
WTC11_00017000	chr11	+	944	3	FSM	ENSG00000149483.13	ENST00000381787.2	1205	3	261	0	261	0	multi-exon	FALSE	canonical	3	163	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61365945	False	NA	NA	False	AATAAA	-21	NA	61365963	61369211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61366217_61367922_61367999_61368596
WTC11_00017003	chr11	+	5400	1	FSM	ENSG00000256591.5	ENST00000623232.1	6012	1	115	497	89	-497	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCTTTTTCAGGAGCC	61419165	False	NA	NA	False	NA	NA	NA	61430238	61435638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61430200_61435600
WTC11_00017004	chr11	+	2915	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCGTGTATGTGTG	NA	False	NA	12	True	AATAAA	-12	NA	61470611	61473526	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_61470600_61473500
WTC11_00017006	chr11	+	257	1	FSM	ENSG00000243742.5	ENST00000490750.1	961	1	780	-76	780	76	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-24	NA	61637459	61637716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61637500_61637700
WTC11_00017007	chr11	+	4249	7	ISM	ENSG00000134780.10	ENST00000540717.1	5699	20	56738	-3	56738	2	3prime_fragment	TRUE	canonical	3	10	junction_1	3.80423740350444	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCTCGAATGTCTT	NA	False	NA	8	True	TATAAA	-18	NA	61737204	61747003	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_61737325_61737686_61737756_61738134_61738208_61739464_61739662_61740462_61740593_61741161_61741350_61743531
WTC11_00017009	chr11	+	5678	26	NNC	ENSG00000124920.14	novel	5940	27	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_4	4.4728514395182	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTCCTTGTCTCTTC	61752348	True	NA	15	True	AATAAA	-26	NA	61752648	61788518	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_61752791_61765624_61765713_61765957_61766222_61769259_61769315_61770391_61770526_61771499_61771751_61771828_61771953_61773966_61774163_61776055_61776133_61776321_61776433_61776786_61776878_61777263_61777465_61777733_61777846_61778379_61778490_61779262_61779424_61779497_61779571_61779841_61779931_61780221_61780291_61780959_61781046_61781137_61781330_61781572_61781825_61783512_61783601_61783850_61783926_61784279_61784386_61785799_61785875_61786062
WTC11_00017015	chr11	+	1653	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	-631	675	-631	-675	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTTAGTTTAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	61967162	61968815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61967200_61968800
WTC11_00017016	chr11	+	560	4	FSM	ENSG00000149503.13	ENST00000533896.5	570	4	10	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	2.86744175568088	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGAGATCGGCATCAG	62116793	True	NA	NA	False	NA	NA	NA	62124007	62130028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62124056_62128150_62128302_62128769_62128884_62129781
WTC11_00017017	chr11	+	4261	5	ISM	ENSG00000149503.13_ENSG00000289194.1	ENST00000394818.8	4114	19	22681	-2304	-5790	690	3prime_fragment	FALSE	canonical	1	1	junction_3	0.433012701892219	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGTTGTTGTT	62146625	False	NA	NA	False	AATAAA	-15	NA	62146691	62155473	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
WTC11_00017018	chr11	+	746	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	22	36206	0	5	5prime_fragment	FALSE	canonical	3	80	junction_1	156.313786979908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTATCTACAGTTCTT	62333145	True	NA	17	True	ATTAAA	-21	NA	62337469	62357206	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
WTC11_00017019	chr11	+	827	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	298	233	26	170	multi-exon	FALSE	canonical	1	2	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACCTCACAACTCCTT	62613544	False	NA	NA	False	NA	NA	NA	62613554	62614883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62613872_62614257_62614505_62614620
WTC11_00017020	chr11	+	913	5	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	75.4730912312461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62727636	False	NA	21	True	AATATA	-14	NA	62728192	62738636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62728228_62728822_62729087_62733117_62733200_62735381_62735565_62738287
WTC11_00017021	chr11	+	1039	1	FSM	ENSG00000162222.14	ENST00000601045.1	346	1	-703	10	-703	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGCATTTAAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	62739244	62740283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62739200_62740300
WTC11_00017022	chr11	+	2244	11	NNC	ENSG00000162227.8	novel	2023	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	58.0137914637545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62769559	True	NA	16	True	AATAAA	-16	NA	62771360	62787342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112_62782520_62782692_62782826_62786259_62786389_62786516
WTC11_00017024	chr11	+	767	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	151.286152704073	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAATGACAGGCCCCC	62783322	True	NA	-53	True	NA	NA	NA	62787365	62790167	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62787528_62789101_62789211_62789291_62789427_62789600_62789680_62789885
WTC11_00017026	chr11	+	772	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	149.56102433455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783372	True	NA	26	True	NA	NA	NA	62787415	62790246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
WTC11_00017029	chr11	+	4580	17	NIC	ENSG00000072518.22	novel	4547	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	70.2041665430194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCCTCCTGTTTCTT	63838990	False	NA	15	True	AATAAA	-20	NA	63839004	63911020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908876
WTC11_00017035	chr11	+	1202	6	NIC	ENSG00000173511.10	novel	1805	7	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	59.7983277358155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCCTGCCTGTGTCAC	64232320	True	NA	21	True	GATAAA	-14	NA	64234512	64238787	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64234894_64235457_64235501_64236253_64236328_64237186_64237223_64237419_64237656_64238355
WTC11_00017036	chr11	+	602	3	NIC	ENSG00000219435.6	novel	917	4	NA	NA	236	1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	2.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGAGTCAGTGCAGGACA	64300636	True	NA	9	True	AATAAA	-17	NA	64300681	64304771	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64300988_64303772_64303840_64304542
WTC11_00017037	chr11	+	1699	8	NNC	ENSG00000173153.17	novel	2274	7	NA	NA	-2	40	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	164.529136430888	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGGGCCAGGGCAATGC	64302066	True	NA	NA	False	NA	NA	NA	64305577	64316069	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_64305737_64306295_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
WTC11_00017039	chr11	+	6171	24	NIC	ENSG00000168071.22	novel	4934	27	NA	NA	663	0	intron_retention	FALSE	canonical	2	14	junction_1	12.9071132628031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTCTTGCTCTGTCT	64340597	True	NA	7	True	AATAAA	-15	NA	64340885	64357528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64341019_64341108_64341179_64341269_64341329_64341420_64341505_64341598_64341743_64341993_64342140_64342293_64342376_64342521_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550_64351256_64351475_64351617_64352129_64352387_64352743_64352888_64353053_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193_64355401_64355559_64355629_64357038
WTC11_00017040	chr11	+	4563	20	FSM	ENSG00000168071.22	ENST00000494080.5	4563	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.9484803144638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTGAGTCTTGCTCT	64341591	False	NA	3	True	AATAAA	-11	NA	64341605	64357524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64341743_64341993_64342140_64342293_64342376_64342501_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550_64349669_64351159_64351617_64352129_64352387_64352743_64352888_64353053_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193_64355401_64355559_64355629_64357038
WTC11_00017042	chr11	+	2114	17	FSM	ENSG00000162302.13	ENST00000530504.1	2114	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	15.3663593606293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGCGGCGGAAGCAGA	64358378	False	NA	NA	False	NA	NA	NA	64359283	64371341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368485_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
WTC11_00017045	chr11	+	378	1	FSM	ENSG00000269038.1	ENST00000594089.1	452	1	-7	81	-7	-81	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGCAACAACATATTAGA	64778932	False	NA	NA	False	AATAGA	-37	NA	64778946	64779324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64778900_64779300
WTC11_00017047	chr11	+	936	3	FSM	ENSG00000149823.9	ENST00000533656.1	923	3	-13	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	218	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCGCTGCCGGGCAGGG	65088766	True	NA	NA	False	NA	NA	NA	65096213	65107727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65096479_65096997_65097128_65107186
WTC11_00017048	chr11	+	594	2	FSM	ENSG00000149823.9	ENST00000531146.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCGGAATGTGCGGGC	NA	False	NA	NA	False	NA	NA	NA	65109054	65109857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65109496_65109704
WTC11_00017055	chr11	+	2535	9	NIC	ENSG00000197847.12	novel	1939	10	NA	NA	2	337	combination_of_known_junctions	FALSE	canonical	2	12	junction_8	4.2555111326373	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAAACAGACTCCCG	65213488	True	NA	NA	False	AATAAA	-15	NA	65213849	65243094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464_65223581_65233149_65233365_65236408_65236518_65236684_65236889_65241989
WTC11_00017056	chr11	+	3684	20	NNC	ENSG00000285816.1	novel	4256	20	NA	NA	-3	-4457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.3848367413948	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCGGAGCTCCCTGT	65260210	True	NA	3	True	AATAAA	-12	NA	65261924	65322086	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65279731_65279788_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65318913_65318984_65320543
WTC11_00017057	chr11	+	2217	2	NNC	ENSG00000149798.5	novel	1963	2	NA	NA	9	241	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGATGATTTCCAGCA	65312743	True	NA	NA	False	ATTAAA	-12	NA	65314874	65322658	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65314955_65320521
WTC11_00017058	chr11	+	524	6	FSM	ENSG00000133884.10	ENST00000532102.5	524	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	307.16575329942	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGCCCACTCCCACTT	65324181	True	NA	NA	False	NA	NA	NA	65333876	65345706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65343744_65343838_65343990_65344070_65345665
WTC11_00017059	chr11	+	3530	10	FSM	ENSG00000126391.14	ENST00000355991.9	3514	10	-16	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	25.963412052966	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGGCAGCTCATG	65384553	True	NA	NA	False	ATTAAA	-14	NA	65386620	65413522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65386762_65387036_65387122_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
WTC11_00017060	chr11	+	15197	1	FSM	ENSG00000245532.10	ENST00000501122.2	22743	1	0	7546	0	-2870	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCTTCTGCCACTGTG	65418307	True	NA	NA	False	NA	NA	NA	65422797	65437994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65422800_65438000
WTC11_00017061	chr11	+	1519	2	FSM	ENSG00000251562.9	ENST00000508832.2	1519	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTAGAGAATGT	65501829	False	NA	7	True	AATAAA	-1	NA	65501847	65503609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65502394_65502636
WTC11_00017064	chr11	+	3385	19	NIC	ENSG00000173442.13	novel	5170	19	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	5.58575127301159	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGCCGGCCTTTTCTCCG	65575408	True	NA	9	True	AATAAA	-18	NA	65576035	65592648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65576407_65579077_65579136_65579340_65579437_65579935_65579990_65580080_65580260_65580336_65580480_65581057_65581127_65581210_65581374_65581538_65581966_65584240_65584399_65584485_65584535_65584958_65585592_65589750_65589821_65589935_65589992_65590086_65590211_65590492_65590593_65591799_65591874_65591975_65592091_65592202
WTC11_00017065	chr11	+	266	3	FSM	ENSG00000197136.5	ENST00000531045.1	266	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTCCCTGGCCGCTGG	65619845	False	NA	NA	False	NA	NA	NA	65619857	65622299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65619933_65620830_65620967_65622244
WTC11_00017066	chr11	+	4538	28	NNC	ENSG00000197136.5	novel	7102	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	26.8456953350941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTTGGCCTGGACCT	65619845	False	NA	-42	True	NA	NA	NA	65619857	65637305	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65619933_65620338_65620430_65620830_65620967_65622205_65622367_65623490_65623645_65623928_65623962_65624194_65624367_65624470_65624582_65624924_65625017_65625170_65625281_65625404_65625511_65625651_65625745_65625903_65626055_65626903_65627049_65627404_65627583_65628594_65628704_65628818_65628949_65629356_65629416_65629519_65629736_65630350_65630605_65634125_65634357_65634537_65634642_65634972_65635121_65635217_65635449_65635528_65635804_65636173_65636308_65636390_65636690_65636765
WTC11_00017067	chr11	+	217	1	FSM	ENSG00000265874.1	ENST00000578869.1	62	1	-197	42	-197	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGCTGGGGACTGGAGA	65648434	False	NA	NA	False	GGGGCT	-9	NA	65648994	65649211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65649000_65649200
WTC11_00017068	chr11	+	729	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	4	964	3	-21	multi-exon	FALSE	canonical	2	10	junction_1	9.89949493661167	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAATAAATCAGTAAACCT	65662755	True	NA	NA	False	NA	NA	NA	65663009	65666340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
WTC11_00017069	chr11	+	606	4	NNC	ENSG00000285533.3	novel	2628	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	10.2306728354819	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATATCTGTATCTGTT	65662755	True	NA	-2	True	AATAAA	-5	NA	65663009	65671704	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65663149_65665445_65665544_65666130_65666218_65671422
WTC11_00017070	chr11	+	2002	14	NNC	ENSG00000172977.13	novel	2237	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	124.381309123082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65708653	True	NA	23	True	AATAAA	-17	NA	65712262	65719604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65712280_65712346_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
WTC11_00017076	chr11	+	541	3	FSM	ENSG00000175513.9	ENST00000528291.2	563	3	22	0	22	0	multi-exon	FALSE	canonical	2	3	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTCTCCATCCCTAC	65945481	True	NA	NA	False	NA	NA	NA	65945712	65947359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65945867_65946879_65947017_65947109
WTC11_00017081	chr11	+	3549	15	FSM	ENSG00000174483.20	ENST00000526760.5	3585	15	36	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	20.1763905268975	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGAGTTGCCCTGAG	66508286	True	NA	22	True	ATTAAA	-30	NA	66510641	66533613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66510707_66511012_66511090_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655
WTC11_00017082	chr11	+	2955	14	NIC	ENSG00000174483.20	novel	3368	17	NA	NA	1	-7	intron_retention	FALSE	canonical	3	4	junction_8	20.8085098659235	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTACTTTCTTTTTAAT	66508298	True	NA	0	True	ATTAAA	-8	NA	66510653	66533591	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
WTC11_00017083	chr11	+	3329	17	NIC	ENSG00000174483.20	novel	3368	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_7	17.6775590438839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	66508314	True	NA	7	True	ATTAAA	-15	NA	66510669	66533598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519620_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
WTC11_00017087	chr11	+	2039	3	FSM	ENSG00000248643.5	ENST00000421355.1	2034	3	-5	0	0	0	multi-exon	TRUE	canonical	3	42	junction_1	216.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCCCAGTTACTAAGAAGA	66615290	True	NA	NA	False	GATAAA	-36	NA	66616625	66644632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66639699_66640124_66643449
WTC11_00017090	chr11	+	1005	2	NIC	ENSG00000173621.9	novel	2869	2	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCTAGTCTCTGGTGT	66856712	False	NA	16	True	AATAAA	-16	NA	66857127	66860472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66857297_66859636
WTC11_00017091	chr11	+	1487	8	FSM	ENSG00000173227.14	ENST00000525457.5	1678	8	191	0	191	0	multi-exon	TRUE	canonical	1	2	junction_1	6.85416602051152	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCCCAGGGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	67022909	67048939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67022926_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
WTC11_00017093	chr11	+	6843	22	NNC	ENSG00000173120.15	novel	7386	21	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	28.0093117007561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACCTTTTCTGCTTCGG	67118889	True	NA	100	True	AATAAA	-20	NA	67119092	67258082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_67119157_67119869_67120050_67121233_67121359_67180078_67180218_67181319_67181399_67181845_67181893_67207509_67207689_67215339_67215447_67215855_67215950_67217730_67217885_67219287_67219404_67228036_67228164_67231565_67231961_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250799_67252693_67252858_67253452_67253612_67254202_67254419_67254873
WTC11_00017094	chr11	+	3180	21	NNC	ENSG00000173020.11	novel	3403	21	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	128.613170009918	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTGTCTCAGACTCT	67266554	False	NA	14	True	TATAAA	-13	NA	67266692	67286555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_67266813_67277271_67277349_67279199_67279274_67279417_67279520_67279625_67279701_67279838_67279901_67280731_67280784_67281092_67281185_67281458_67281559_67281649_67281729_67281821_67281953_67282270_67282364_67282434_67282543_67282751_67282819_67283127_67283229_67283706_67283774_67283853_67283950_67284210_67284374_67284846_67284984_67285074_67285189_67285285
WTC11_00017095	chr11	+	2937	14	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	-35	0	intron_retention	TRUE	canonical	3	16	junction_1	26.9972604351982	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300887	True	NA	9	True	AATAAA	-14	NA	67303442	67312592	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_67303692_67304048_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
WTC11_00017096	chr11	+	291	1	FSM	ENSG00000275484.1	ENST00000616071.1	517	1	176	50	176	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTGCCCTATAGCCACA	NA	False	NA	NA	False	NA	NA	NA	67374591	67374882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67374600_67374900
WTC11_00017097	chr11	+	989	7	NNC	ENSG00000172613.8	novel	2086	11	NA	NA	345	260	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	36.7940967487389	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCGCAGGCCCCAGCTG	67391875	False	NA	NA	False	NA	NA	NA	67393649	67397684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_67393791_67395715_67395826_67395915_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
WTC11_00017098	chr11	+	1091	3	NNC	ENSG00000172508.11	novel	5065	8	NA	NA	4363	-2	intron_retention	FALSE	canonical	1	2	junction_2	1	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTGTCTAGATAGGTT	67420513	False	NA	NA	False	AATAAA	-14	NA	67420558	67425602	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_67420841_67420938_67421220_67425074
WTC11_00017099	chr11	+	711	6	ISM	ENSG00000084207.18	ENST00000398606.10	741	7	322	-3	0	0	3prime_fragment	FALSE	canonical	3	12405	junction_4	348.471519639697	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	67583964	True	NA	46	True	AATAAA	-20	NA	67584133	67586656	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
WTC11_00017100	chr11	+	817	7	FSM	ENSG00000110717.13	ENST00000526446.5	814	7	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1222.40591548889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGGAGGCCGAGATC	68008084	True	NA	-92	True	NA	NA	NA	68030680	68036537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030734_68032151_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68036252_68036382_68036461
WTC11_00017104	chr11	+	664	2	FSM	ENSG00000255031.5	ENST00000534517.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTCCCGATCTCGT	NA	False	NA	22	True	ATTAAA	-33	NA	68052822	68053762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68053086_68053361
WTC11_00017105	chr11	+	2846	23	NIC	ENSG00000110075.15	novel	5072	24	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	187.820909951145	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGCTGACTGAGGAC	68446591	True	NA	NA	False	NA	NA	NA	68460714	68613128	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613035
WTC11_00017106	chr11	+	2958	24	NIC	ENSG00000110075.15	novel	5072	24	NA	NA	-16	19	combination_of_known_junctions	FALSE	canonical	3	222	junction_2	181.313157955061	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGCAGACCGCCACCA	68446591	True	NA	NA	False	NA	NA	NA	68460714	68613143	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68460828_68505144_68505272_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
WTC11_00017111	chr11	+	4619	16	FSM	ENSG00000132740.10	ENST00000676173.1	4597	16	-22	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	33.4573692264582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	68901737	True	NA	19	True	ATTAAA	-19	NA	68903890	68940601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68904039_68906068_68906243_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68929733_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
WTC11_00017115	chr11	+	227	5	FSM	ENSG00000131620.18	ENST00000529913.1	307	5	0	80	0	-80	multi-exon	FALSE	canonical	2	7	junction_3	5.1234753829798	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATGGAGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	70104128	70116499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70104151_70105733_70105789_70108352_70108405_70111706_70111763_70116457
WTC11_00017116	chr11	+	3384	20	FSM	ENSG00000131620.18	ENST00000689710.1	3552	20	168	0	168	0	multi-exon	TRUE	canonical	0	0	junction_7	5.94154349122951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGATGTTACATTCC	NA	False	NA	NA	False	AATAAA	-19	NA	70108352	70189252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70108405_70111706_70111763_70116457_70116500_70124349_70124415_70126060_70126196_70131918_70132080_70149709_70149793_70152449_70152462_70153056_70153129_70156946_70157022_70161160_70161363_70161621_70161734_70163282_70163341_70165469_70165571_70167241_70167388_70170886_70171040_70180003_70180057_70182501_70182687_70185589_70185696_70187737
WTC11_00017119	chr11	+	2282	20	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	33.8286377393761	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGAATCCAATGCA	71450882	True	NA	7	True	AATAAA	-15	NA	71453203	71501537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_71453382_71455109_71455171_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
WTC11_00017120	chr11	+	820	8	FSM	ENSG00000172890.13	ENST00000529840.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	67.7700192578111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGCCCAGTGGCA	71478375	False	NA	NA	False	NA	NA	NA	71478394	71485648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71478470_71480218_71480275_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541
WTC11_00017133	chr11	+	463	3	FSM	ENSG00000110237.5	ENST00000536170.1	793	3	106	224	106	-224	multi-exon	FALSE	canonical	1	1	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGCACAGGCCCTCCT	73343081	False	NA	NA	False	NA	NA	NA	73343101	73353038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73343278_73346882_73346961_73352829
WTC11_00017134	chr11	+	4694	21	FSM	ENSG00000110237.5	ENST00000643371.1	4962	21	178	90	106	-90	multi-exon	FALSE	canonical	1	1	junction_1	5.06828373317832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGTGCTTTGTAACCA	73343081	False	NA	-2	True	AATAAA	-12	NA	73343101	73369298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73343278_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
WTC11_00017139	chr11	+	980	9	FSM	ENSG00000175575.13	ENST00000504441.6	975	9	-5	0	1	0	multi-exon	FALSE	canonical	1	1	junction_2	257.796885890811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGGCCCGGGAAGATAA	73871606	True	NA	NA	False	NA	NA	NA	73876974	73914447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878778_73878820_73886928_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412
WTC11_00017147	chr11	+	511	4	FSM	ENSG00000087884.15	ENST00000525034.1	511	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	151.956134021193	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	NA	False	NA	15	True	AATAAA	-15	NA	77841137	77872352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77841225_77842478_77842629_77869721_77869818_77872174
WTC11_00017151	chr11	+	1684	8	FSM	ENSG00000165490.13	ENST00000525361.5	1830	8	0	146	0	-146	multi-exon	FALSE	canonical	2	3	junction_7	91.3095207052834	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCAACATCCTGGGTC	82898411	True	NA	NA	False	NA	NA	NA	82901697	82958131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82901823_82913286_82913387_82913956_82914171_82914722_82914852_82928776_82928939_82930156_82930275_82931731_82931850_82957413
WTC11_00017155	chr11	+	3956	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	-18	0	-18	0	multi-exon	FALSE	canonical	2	10	junction_4	32.7645355971881	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	NA	False	NA	35	True	AGTAAA	-20	NA	87037825	87323758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
WTC11_00017156	chr11	+	9056	14	NIC	ENSG00000166575.17	novel	8980	15	NA	NA	-18	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	34.3144181058171	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTAGATCTCCTTTTA	NA	False	NA	11	True	AATAAA	-21	NA	87037825	87328826	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_87038187_87067693_87067822_87071522_87071616_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
WTC11_00017162	chr11	+	8062	8	FSM	ENSG00000165323.16	ENST00000533797.1	7894	8	0	-168	0	0	multi-exon	FALSE	canonical	2	7	junction_5	7.49149177264394	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTGTTGACTCTTTT	92844318	False	NA	NA	False	AGTAAA	-19	NA	92844339	92896473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_92844733_92857213_92857349_92859164_92859323_92866740_92867210_92880730_92880885_92882737_92883394_92886999_92887114_92890490
WTC11_00017169	chr11	+	2100	3	FSM	ENSG00000168876.9	ENST00000540349.1	573	3	-62	-1465	-62	0	multi-exon	FALSE	canonical	1	1	junction_2	42	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	94493760	False	NA	8	True	AATAAA	-19	NA	94493916	94499577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_94494036_94496603_94497078_94498070
WTC11_00017171	chr11	+	7155	5	NIC	ENSG00000255666.7	novel	2753	12	NA	NA	-224	4592	intron_retention	FALSE	canonical	3	102	junction_2	176.327110791279	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCAATTCTTTGT	94641672	False	NA	45	True	AATAAA	-33	NA	94641682	94657476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_94642158_94647334_94647579_94648016_94648389_94650473_94650538_94651476
WTC11_00017172	chr11	+	971	7	NNC	ENSG00000255666.7	novel	644	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	192.722094103285	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTTTGACACAATTA	94632443	True	NA	25	True	AAGAAA	-22	NA	94641929	94651629	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_94641945_94643879_94644154_94647334_94647579_94648016_94648109_94648259_94648389_94650473_94650538_94651476
WTC11_00017173	chr11	+	1111	7	NNC	ENSG00000255666.7	novel	644	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	186.869532621619	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTTTGACACAATTA	94632443	True	NA	25	True	AAGAAA	-22	NA	94641929	94651629	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_94641945_94643720_94644135_94647334_94647579_94648016_94648109_94648259_94648389_94650473_94650538_94651476
WTC11_00017174	chr11	+	6113	5	NNC	ENSG00000255666.7	novel	2753	12	NA	NA	0	4006	intron_retention	FALSE	canonical	1	3	junction_2	202.661509665748	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCACTAAACAGAGCAGGG	94632443	True	NA	NA	False	NA	NA	NA	94641929	94656890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_94642158_94647334_94647579_94648225_94648389_94650473_94650538_94651476
WTC11_00017176	chr11	+	2737	2	FSM	ENSG00000186280.7	ENST00000536741.1	2737	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATTTTATTTCAAATAT	94973554	True	NA	13	True	ATTAAA	-20	NA	94973822	94999514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_94974069_94997023
WTC11_00017184	chr11	+	2172	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	94.1617992842344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344591	True	NA	25	True	AATAAA	-15	NA	102347224	102378670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
WTC11_00017185	chr11	+	4073	9	FSM	ENSG00000110330.10	ENST00000527910.5	4073	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	94.6974623472034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344740	False	NA	25	True	AATAAA	-15	NA	102347373	102378670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_102347846_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
WTC11_00017186	chr11	+	1257	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11906	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	139.401099947836	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTGTGTTACCAGA	102374520	True	NA	18	True	AATAAA	-8	NA	102374647	102378663	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
WTC11_00017202	chr11	+	1088	3	FSM	ENSG00000076043.11	ENST00000540492.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_2	42	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAGATGAAAAGAA	114445085	False	NA	NA	False	NA	NA	NA	114445117	114449909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114446088_114447825_114447880_114449845
WTC11_00017212	chr11	+	657	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	-3	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	119014238	True	NA	0	True	CATAAA	-7	NA	119018762	119023642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119018971_119021759_119021887_119023320
WTC11_00017213	chr11	+	822	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	-5	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	386.855126486504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	119014265	True	NA	17	True	AATAAA	-12	NA	119018789	119023659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
WTC11_00017215	chr11	+	1771	2	FSM	ENSG00000160695.16	ENST00000526829.1	1952	2	181	0	181	0	multi-exon	FALSE	canonical	3	76	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAAGTTTCTGGATGCC	119071314	False	NA	NA	False	NA	NA	NA	119072212	119076928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119073952_119076896
WTC11_00017220	chr11	+	349	2	FSM	ENSG00000172273.13	ENST00000527206.1	573	2	-13	237	-2	115	multi-exon	FALSE	canonical	3	111	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATTTTCCTAATTGT	119118557	True	NA	NA	False	NA	NA	NA	119121577	119127221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119121640_119126934
WTC11_00017221	chr11	+	526	4	FSM	ENSG00000172273.13	ENST00000527354.5	540	4	-1	15	0	-15	multi-exon	FALSE	canonical	3	6	junction_1	74.8880646179498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTCAGAGGAAGTG	119118588	True	NA	NA	False	NA	NA	NA	119121608	119131982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119121640_119130724_119130955_119131534_119131647_119131829
WTC11_00017223	chr11	+	1568	10	FSM	ENSG00000172350.10	ENST00000533694.5	2719	10	1151	0	1151	0	multi-exon	TRUE	canonical	2	9	junction_9	3.19722101554181	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCCCTACAGGTGGGA	119153931	False	NA	NA	False	GGGGCT	-18	NA	119154025	119160371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119154144_119154259_119154393_119154524_119154576_119154769_119154916_119156328_119156453_119156563_119156679_119156871_119157015_119158233_119158726_119158828_119158930_119160226
WTC11_00017225	chr11	+	3912	8	FSM	ENSG00000154114.13	ENST00000284259.11	3923	8	11	0	2	0	multi-exon	FALSE	canonical	2	3	junction_3	18.581316049259	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACTTGTAACCAAAATTA	121023264	True	NA	3	True	AATAAA	-15	NA	121024103	121089607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121024292_121045673_121045824_121047527_121047668_121053629_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
WTC11_00017238	chr11	+	1667	7	NIC	ENSG00000154134.15	novel	1645	11	NA	NA	12	2	intron_retention	FALSE	canonical	2	6	junction_2	48.8353241914998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGCCCTGTCTGTCTGG	124875994	True	NA	16	True	AATAAA	-18	NA	124876857	124881468	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877518_124877659_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
WTC11_00017253	chr11	-	289	2	NNC	ENSG00000230724.9	novel	2553	7	NA	NA	7745	2640	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCTCCTGCCACCCAG	-131233	False	NA	NA	False	NA	NA	NA	131253	130932	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_131088_131119
WTC11_00017254	chr11	-	866	4	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	91	junction_1	53.0722777603022	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACAGGTAAGCATCGTG	NA	False	NA	NA	False	NA	NA	NA	159982	141460	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_141577_150835_150901_153732_153890_159454
WTC11_00017255	chr11	-	3226	4	NNC	ENSG00000177951.18	novel	2792	4	NA	NA	0	434	intron_retention	FALSE	canonical	3	17	junction_3	80.0791275343748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAACAGGGAGAACGGT	-205318	True	NA	NA	False	NA	NA	NA	207382	202489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_205470_205610_205668_205951_206061_207302
WTC11_00017256	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	80.431475320438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	-236745	False	NA	NA	False	NA	NA	NA	236834	216610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
WTC11_00017257	chr11	-	640	3	NNC	ENSG00000142089.17	novel	611	2	NA	NA	0	79576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4073	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCATTTATCATTTTC	-272993	True	NA	NA	False	AAAAAG	-2	NA	320860	240099	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_240129_319675_319991_320564
WTC11_00017258	chr11	-	1766	9	NIC	ENSG00000185187.13	novel	1743	10	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	61.1247443757436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-406457	False	NA	0	True	AATAAA	-23	NA	410014	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867
WTC11_00017259	chr11	-	1635	7	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	29	6	intron_retention	FALSE	canonical	3	44	junction_6	68.5994816954829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-413869	True	NA	0	True	AATAAA	-23	NA	417426	405709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
WTC11_00017260	chr11	-	821	3	ISM	ENSG00000185187.13	ENST00000527987.1	803	4	62	-12	6	0	intron_retention	FALSE	canonical	3	213	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-406207	True	NA	-6	True	AATAAA	-17	NA	407129	405715	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_406060_406348_406539_406842
WTC11_00017261	chr11	-	2639	22	FSM	ENSG00000185101.13	ENST00000528927.5	2639	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	8.39122746758175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGGGCTCTCAGGCTT	-441632	True	NA	NA	False	NA	NA	NA	441957	418191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
WTC11_00017266	chr11	-	1970	9	FSM	ENSG00000185507.21	ENST00000397566.5	2051	9	81	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	14.7134080008678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-614804	False	NA	-3	True	AATAAA	-16	NA	615647	612554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096
WTC11_00017267	chr11	-	2158	12	FSM	ENSG00000177030.19	ENST00000683307.1	2267	12	115	-6	115	0	multi-exon	FALSE	canonical	1	41	junction_11	173.405510507539	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-706843	True	NA	-15	True	AATAAA	-15	NA	707003	644232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_706571
WTC11_00017269	chr11	-	802	8	FSM	ENSG00000177542.11	ENST00000531437.5	802	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.590421503756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTACTTCCCGCTC	-794340	True	NA	NA	False	NA	NA	NA	798271	792444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792459_792552_792728_792869_792989_793528_793620_794469_794514_794775_794902_794986_795165_798216
WTC11_00017271	chr11	-	2994	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_15	41.5066259770654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	-808712	True	NA	-6	True	NA	NA	NA	809474	799183	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_809411
WTC11_00017273	chr11	-	1463	5	FSM	ENSG00000182208.15	ENST00000329957.7	1745	5	284	-2	284	2	multi-exon	FALSE	canonical	0	0	junction_4	39.1687056206865	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTACGTCTCAGCGT	NA	False	NA	-5	True	AATAAA	-21	NA	1486495	1469454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1486446
WTC11_00017274	chr11	-	806	3	NNC	ENSG00000182208.15	novel	1745	5	NA	NA	0	-52	intron_retention	FALSE	canonical	3	7	junction_1	42.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCATCATGGACGACCTC	-1480786	True	NA	NA	False	NA	NA	NA	1480885	1470296	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_1470485_1471294_1471420_1480392
WTC11_00017275	chr11	-	989	5	FSM	ENSG00000130600.20	ENST00000428066.7	1243	5	0	254	0	9	multi-exon	FALSE	canonical	3	33	junction_2	8.8423695919137	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGCGTGAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	2001470	1995429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_2001217
WTC11_00017276	chr11	-	659	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	-32	-192	-32	12	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTGTTATTTCTAAC	-2335717	True	NA	NA	False	AATAAA	-29	NA	2335781	2335122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2335100_2335800
WTC11_00017278	chr11	-	2657	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	496.379529951732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCACTGTGCCATGTG	-2977108	False	NA	-11	True	ATTAAA	-15	NA	2992102	2944437	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
WTC11_00017285	chr11	-	4134	1	FSM	ENSG00000189398.5	ENST00000344740.4	973	1	-1151	-2010	-1151	2010	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGAATACTATCACAGG	NA	False	NA	NA	False	NA	NA	NA	3392903	3388769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3388800_3392900
WTC11_00017286	chr11	-	1689	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	7447	-3009	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCACCTGTGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	3415049	3413360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3413400_3415000
WTC11_00017290	chr11	-	249	2	FSM	ENSG00000205494.9	ENST00000481634.1	799	2	0	550	0	-550	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGGAGTTGGTTCTCC	NA	False	NA	0	True	ATTAAA	-15	NA	5124513	5121704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5121908_5124467
WTC11_00017291	chr11	-	480	3	FSM	ENSG00000196565.15	ENST00000336906.6	586	3	7	99	7	-97	multi-exon	FALSE	canonical	1	1	junction_1	0.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACTGAGCTCACTGCC	NA	False	NA	NA	False	NA	NA	NA	5254774	5253286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5253406_5254291_5254515_5254636
WTC11_00017293	chr11	-	638	2	FSM	ENSG00000166337.11	ENST00000532344.1	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCCACGCATGTGAGTA	-6597363	True	NA	NA	False	NA	NA	NA	6612177	6611400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6611819_6611957
WTC11_00017296	chr11	-	4290	12	FSM	ENSG00000166340.18	ENST00000647346.1	4282	12	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_5	59.7648283754233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCACTGCGCCCCCT	-6618325	True	NA	29	True	NA	NA	NA	6619421	6612967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6618916_6619195_6619268_6619383
WTC11_00017300	chr11	-	1126	8	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	117.080819809852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGCTCTGTGG	-7670204	False	3266	0	True	AATAAA	-23	NA	7673470	7665096	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7665547_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
WTC11_00017301	chr11	-	4650	7	NIC	ENSG00000166405.15	novel	1211	7	NA	NA	11	-6	intron_retention	TRUE	canonical	2	5	junction_3	14.9220195237329	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAATTGTTTTCTGTGTT	-8167063	True	NA	NA	False	NA	NA	NA	8168978	8108947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8111138_8126658_8126805_8128218_8128355_8137377_8137472_8138271_8140194_8153374_8153424_8168865
WTC11_00017304	chr11	-	939	4	FSM	ENSG00000166407.14	ENST00000335790.8	1294	4	139	216	119	-46	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGCCGCTCTCCTGCCA	NA	False	NA	NA	False	NA	NA	NA	8263739	8224524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8263337
WTC11_00017305	chr11	-	2565	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	0	-7	0	4	multi-exon	FALSE	canonical	0	0	junction_12	22.5511763674438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTTAACAAGAGGT	-8592595	False	1361	0	True	AATAAA	-26	NA	8593956	8391863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
WTC11_00017314	chr11	-	1621	7	FSM	ENSG00000133812.18	ENST00000693212.1	1700	7	76	3	-15	-3	multi-exon	FALSE	canonical	1	1	junction_1	52.7404546392573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTCTTCTAGTGCAA	-10294122	False	NA	-7	True	ATTAAA	-11	NA	10294143	10026956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10027885_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
WTC11_00017315	chr11	-	1492	6	NIC	ENSG00000133812.18	novel	1700	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	66.11323619367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTCTCTTCTAGTGC	-10044353	True	NA	-9	True	ATTAAA	-9	NA	10044606	10026958	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_10027885_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
WTC11_00017317	chr11	-	6109	21	NNC	ENSG00000072952.20	novel	6129	21	NA	NA	-35344	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	4.41474801092882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCTGGCAGCAGCCAAA	-10728744	True	NA	-17	True	AATAAA	-13	NA	10729332	10573096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965_10626584_10627715_10627761_10627972_10628026_10628750_10628829_10629537_10629712_10631990_10632062_10633967_10634072_10652024_10652183_10729130
WTC11_00017318	chr11	-	2005	3	NNC	ENSG00000254670.1	novel	670	2	NA	NA	56	5394	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATAGGTTGCTTGACT	-13009009	False	NA	NA	False	AATAAA	-12	NA	13009103	12995695	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_12997087_13001089_13001227_13008626
WTC11_00017319	chr11	-	2655	10	NIC	ENSG00000148925.11	novel	2439	9	NA	NA	0	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	72.1849476460755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGACCAAATTTATA	-13460725	True	NA	-25	True	AATAAA	-16	NA	13463276	13388021	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13462621_13462798_13463091
WTC11_00017320	chr11	-	3611	2	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATTTCAAGCGTGAGT	-14272659	False	NA	NA	False	NA	NA	NA	14272671	14268314	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_14268907_14269652
WTC11_00017321	chr11	-	1266	11	FSM	ENSG00000129084.18	ENST00000418988.2	1266	11	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_9	584.707482421766	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGTTTTTTCCAA	-14643395	True	NA	NA	False	NA	NA	NA	14643617	14505063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14610965_14611152_14643454
WTC11_00017322	chr11	-	449	3	FSM	ENSG00000186104.11	ENST00000525015.1	446	3	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14885618	False	NA	NA	False	AATAAA	-24	NA	14885841	14878008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879208_14885775
WTC11_00017323	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	32.3612422505688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891091	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
WTC11_00017324	chr11	-	1908	6	NIC	ENSG00000186104.11	novel	1746	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	32.7328581092455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGTCACAGCATCAA	-14891069	True	NA	NA	False	NA	NA	NA	14891640	14878037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14890431_14890470_14890899
WTC11_00017326	chr11	-	579	4	FSM	ENSG00000110680.13	ENST00000396372.2	581	4	2	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGCTTTCCTTGTG	-14972243	False	NA	NA	False	NA	NA	NA	14972271	14968705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14968998_14969934_14970076_14971106_14971202_14972220
WTC11_00017327	chr11	-	5748	27	NIC	ENSG00000166689.16	novel	5530	27	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_21	12.6133323846696	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	-17013017	False	NA	-13	True	ATTAAA	-13	NA	17014341	16777296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791203_16794487_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855618_16855712_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
WTC11_00017329	chr11	-	8469	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	1	4374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.388261655078	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATACAATGGACTTTTA	-17193644	True	NA	NA	False	NA	NA	NA	17207985	17082197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082226_17086560_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
WTC11_00017330	chr11	-	8455	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	1	4374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.388261655078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATACAATGGACTTTTA	-17193644	True	NA	NA	False	NA	NA	NA	17207985	17082197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082226_17086574_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
WTC11_00017332	chr11	-	2146	20	FSM	ENSG00000006611.17	ENST00000527020.5	2159	20	0	13	0	-13	multi-exon	FALSE	canonical	1	1	junction_10	3.47288667080497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTCCAGCTTATA	-17544229	True	NA	-17	True	AATAAA	-4	NA	17544400	17493912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
WTC11_00017333	chr11	-	317	2	FSM	ENSG00000006611.17	ENST00000527551.1	371	2	54	0	54	0	multi-exon	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGAAGGCCAACGTGG	NA	False	NA	NA	False	NA	NA	NA	17496859	17494161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17494377_17496757
WTC11_00017334	chr11	-	1504	12	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	63.4368300355454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTCCCAGAGAATTG	-18011009	True	NA	-13	True	AATAAA	-17	NA	18012924	17788050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
WTC11_00017335	chr11	-	1051	10	NIC	ENSG00000129158.11	novel	893	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	61.5192432004053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTATTGGTTTGGCTCT	-18011113	True	NA	-6	True	AATAAA	-17	NA	18013028	17877845	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17877998_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
WTC11_00017336	chr11	-	4676	23	NIC	ENSG00000110756.18	novel	4840	23	NA	NA	0	-71	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	23.5224967050624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACAGGAGGTTTATTA	-18320526	True	NA	-3	True	AATAAA	-36	NA	18322178	18278746	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18322076
WTC11_00017338	chr11	-	4867	6	NNC	ENSG00000148943.12	novel	4842	5	NA	NA	0	19586	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	263.284332993819	2735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAACATGGTGGTGGGCA	-27490310	True	NA	NA	False	AAAAAG	-3	NA	27506769	27474831	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27474859_27494419_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
WTC11_00017340	chr11	-	6932	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	3328	at_least_one_novel_splicesite	FALSE	canonical	3	208	junction_1	908	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCAATGAGGCTGAAAAC	-27587645	True	NA	-22	True	AATAAA	-28	NA	27634521	27614297	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618183_27621289_27624146_27634330
WTC11_00017342	chr11	-	298	2	FSM	ENSG00000066382.17	ENST00000524636.1	457	2	0	159	0	-159	multi-exon	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGATGATTCAAACAG	-30536055	True	NA	NA	False	NA	NA	NA	30536065	30495295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_30495522_30535993
WTC11_00017343	chr11	-	576	5	NNC	ENSG00000148950.11	novel	733	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	128.740776368639	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506797	True	NA	-5	True	AATAAA	-15	NA	31509574	31432400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_31432569_31433459_31433571_31456259_31456387_31488127_31488242_31509518
WTC11_00017344	chr11	-	572	5	NIC	ENSG00000148950.11	novel	733	6	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	114.770150736156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506811	True	NA	-5	True	AATAAA	-15	NA	31509588	31432400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_31432569_31433459_31433571_31460625_31460715_31463171_31463306_31509518
WTC11_00017346	chr11	-	632	5	FSM	ENSG00000284969.1	ENST00000527926.5	633	5	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	197.020303522251	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCATGGTCTCTCTCCT	-33722417	True	NA	NA	False	NA	NA	NA	33722448	33698262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33698515_33702667_33702738_33710205_33710344_33717369_33717472_33722378
WTC11_00017347	chr11	-	1124	5	FSM	ENSG00000085063.17	ENST00000533403.6	1124	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	167.888355760607	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAGAGAGGTACAAGTG	-33731376	True	NA	-121	True	NA	NA	NA	33736408	33709555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33711383_33711506_33717369_33717472_33722378_33722464_33736381
WTC11_00017349	chr11	-	578	1	FSM	ENSG00000254708.1	ENST00000531489.1	886	1	338	-30	338	30	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATGTAATATTTGG	NA	False	NA	NA	False	AAGAAA	-42	NA	34335665	34335087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34335100_34335700
WTC11_00017350	chr11	-	3642	8	NNC	ENSG00000175104.15	novel	7885	7	NA	NA	0	86323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.5291514178686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATCGGCTGCCTGGCT	-36509301	True	NA	NA	False	NA	NA	NA	36510272	36397445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_36397475_36488040_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
WTC11_00017354	chr11	-	466	6	FSM	ENSG00000135365.17	ENST00000533757.5	466	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	23.9215384120671	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGGAAAAGGGGAGGGG	-46119826	False	1462	NA	False	NA	NA	NA	46119853	46076753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46118741_46118801_46119723
WTC11_00017355	chr11	-	3020	2	FSM	ENSG00000180720.8	ENST00000682254.1	3044	2	24	0	24	0	multi-exon	TRUE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTTATTTGATGTGTT	-46391702	True	NA	NA	False	ATTAAA	-29	NA	46391752	46383788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46386587_46391530
WTC11_00017358	chr11	-	840	8	FSM	ENSG00000149182.15	ENST00000529455.5	840	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	145.281851332266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAAGGCTGTTTTCT	-47169019	True	NA	NA	False	NA	NA	NA	47176851	47168127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47175181_47175314_47175850_47175924_47176515_47176635_47176781
WTC11_00017362	chr11	-	1881	12	NNC	ENSG00000165912.16	novel	1873	11	NA	NA	0	3152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.739724611674	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCACTGTGCTTGGGGAC	-47182279	True	NA	NA	False	NA	NA	NA	47186409	47174369	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47174406_47177524_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
WTC11_00017363	chr11	-	404	5	NIC	ENSG00000165912.16	novel	654	5	NA	NA	0	-182	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	155.866128456442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTTTTCACGGCGGCT	-47182279	True	NA	NA	False	NA	NA	NA	47186409	47180657	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47180691_47182402_47182560_47182673_47182765_47183003_47183066_47186348
WTC11_00017365	chr11	-	7152	4	FSM	ENSG00000149187.19	ENST00000539254.1	572	4	-186	-6394	-186	0	multi-exon	FALSE	canonical	3	378	junction_1	12.3558353285671	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	-47477233	False	NA	-3	True	ATTAAA	-15	NA	47477246	47465936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845
WTC11_00017370	chr11	-	472	5	FSM	ENSG00000165923.17	ENST00000530577.5	552	5	80	0	80	0	multi-exon	FALSE	canonical	1	1	junction_1	5.59016994374947	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCTAAAGGAAATGAAAAG	-47714337	False	NA	NA	False	NA	NA	NA	47714347	47699520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47699554_47704542_47704729_47705863_47705918_47710376_47710512_47714283
WTC11_00017371	chr11	-	898	5	FSM	ENSG00000165923.17	ENST00000529154.5	927	5	29	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_4	5.67340285895511	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATGTCCTTCCAGA	-47715085	True	NA	NA	False	NA	NA	NA	47715353	47705863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47705918_47710376_47710512_47714283_47714348_47714617_47714751_47714841
WTC11_00017372	chr11	-	2897	12	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-23	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	66.9714383429161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-47744126	True	NA	-21	True	AATAAA	-20	NA	47744143	47716516	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47725736_47725837_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952
WTC11_00017373	chr11	-	4383	17	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-23	intron_retention	FALSE	canonical	3	44	junction_16	43.8220834739746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-47761611	True	NA	-21	True	AATAAA	-20	NA	47767286	47716516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
WTC11_00017374	chr11	-	378	1	FSM	ENSG00000254780.1	ENST00000524963.1	285	1	92	-185	92	185	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCACTTACAACAACAAA	NA	False	NA	NA	False	AATAAA	-7	NA	47905515	47905137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47905100_47905500
WTC11_00017375	chr11	-	2812	18	NNC	ENSG00000149136.9	novel	2831	17	NA	NA	0	32051	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.22595709238	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCTACCTGTTAGAAAG	-57312380	True	NA	NA	False	NA	NA	NA	57335851	57293934	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_57293957_57325987_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
WTC11_00017376	chr11	-	681	4	FSM	ENSG00000254979.5	ENST00000529411.1	681	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	90.5133507647721	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCTATGGCTGAG	-57410103	False	NA	NA	False	NA	NA	NA	57410113	57389009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57389318_57389886_57389957_57409174_57409299_57409934
WTC11_00017377	chr11	-	2424	15	NIC	ENSG00000149150.9	novel	2358	15	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_14	34.9428104193123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57514455	False	NA	-5	True	AATAAA	-16	NA	57514904	57484533	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501375_57513957_57514125_57514780
WTC11_00017378	chr11	-	2470	14	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	30.948133744194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57515302	True	NA	-5	True	AATAAA	-16	NA	57515751	57484533	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
WTC11_00017379	chr11	-	462	1	FSM	ENSG00000265566.2	ENST00000577229.2	281	1	-11	-170	-11	170	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCAAGCTTGCTGGAGG	-57519881	False	NA	NA	False	NA	NA	NA	57528376	57527914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57527900_57528400
WTC11_00017380	chr11	-	3050	4	FSM	ENSG00000255240.6	ENST00000663130.1	3360	4	3	307	3	-307	multi-exon	FALSE	canonical	1	3	junction_2	0.942809041582063	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCCAAAACACAACACCT	-59058205	True	NA	NA	False	TATAAA	-16	NA	59058465	59048674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59051309_59053456_59053627_59055294_59055447_59058371
WTC11_00017381	chr11	-	991	7	FSM	ENSG00000110048.12	ENST00000525357.1	991	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	163.576434733124	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGAAGCTATGAAAGCCAC	-59600816	False	NA	NA	False	AAAACA	-26	NA	59600856	59576832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59594009_59594256_59600495_59600628_59600818
WTC11_00017382	chr11	-	3762	20	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	54	343	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	16.2240203576394	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAGCTTAGTACCCATT	-61295207	False	NA	NA	False	NA	NA	NA	61295262	61257942	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286376_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
WTC11_00017383	chr11	-	3985	26	FSM	ENSG00000167986.15	ENST00000680075.1	3981	26	0	-4	0	0	multi-exon	FALSE	canonical	1	131	junction_23	340.734913972725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	-61313001	True	NA	NA	False	AATAAA	-19	NA	61333067	61299450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329957_61330075_61331542_61331692_61332907
WTC11_00017384	chr11	-	4352	28	FSM	ENSG00000167986.15	ENST00000681803.1	4348	28	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_27	357.056626940671	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	-61333602	True	NA	NA	False	AATAAA	-19	NA	61333807	61299450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333603
WTC11_00017386	chr11	-	1827	2	FSM	ENSG00000162144.10	ENST00000536452.1	1827	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGACCAGCTCCCCATCT	NA	False	NA	-87	True	NA	NA	NA	61351284	61348889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61350423_61350990
WTC11_00017387	chr11	-	1094	6	FSM	ENSG00000162144.10	ENST00000536915.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	63.2025315948657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTGGCTGCTTGCTG	-61357266	False	NA	NA	False	NA	NA	NA	61357279	61350125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202
WTC11_00017390	chr11	-	1870	12	NNC	ENSG00000221968.9	novel	1790	12	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_5	120.554778194207	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGGTGAATTTGCAT	-61889442	True	NA	-4	True	ATTAAA	-23	NA	61891636	61873518	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877528_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
WTC11_00017393	chr11	-	805	4	FSM	ENSG00000167996.16	ENST00000526640.5	786	4	0	-19	0	0	multi-exon	FALSE	canonical	3	410	junction_3	6765.1679621097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826315	True	NA	-39	True	AATAAA	-15	NA	61967607	61964565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967401
WTC11_00017394	chr11	-	998	6	FSM	ENSG00000124942.14	ENST00000257247.11	1024	6	15	11	15	-10	multi-exon	FALSE	canonical	1	2	junction_1	1.49666295470958	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAAGCATCTGTTCTT	-62546255	False	NA	-15	True	AATAAA	-3	NA	62546781	62433556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62433892_62491731_62491832_62535002_62535191_62535944_62536099_62536468_62536568_62546659
WTC11_00017395	chr11	-	18736	5	FSM	ENSG00000124942.14	ENST00000378024.9	18761	5	25	0	15	0	multi-exon	FALSE	canonical	0	0	junction_1	2.23606797749979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGCCTTTGCATTC	-62546255	False	NA	0	True	AATAAA	-19	NA	62546781	62515901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62534075_62535002_62535191_62535944_62536099_62536468_62536568_62546659
WTC11_00017396	chr11	-	662	4	FSM	ENSG00000149016.16	ENST00000494385.1	699	4	37	0	37	0	multi-exon	FALSE	canonical	2	2	junction_3	129.586521932903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTGAGTGTCCCAGG	-62589433	True	NA	NA	False	NA	NA	NA	62591575	62581107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62581207_62581385_62581702_62589030_62589222_62591519
WTC11_00017398	chr11	-	671	3	FSM	ENSG00000149499.12	ENST00000439994.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	70.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-62603720	False	NA	-1	True	AATAAA	-17	NA	62603738	62602217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602780_62603148_62603248_62603728
WTC11_00017400	chr11	-	2911	22	FSM	ENSG00000149499.12	ENST00000529309.5	2909	22	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_2	28.9106058264385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-62612497	False	2059	-1	True	AATAAA	-17	NA	62612530	62602217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602780_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
WTC11_00017402	chr11	-	3665	21	FSM	ENSG00000149499.12	ENST00000494448.5	3665	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	31.3015974033275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGCCTCCCGGTGCTT	-62612348	False	NA	-9	True	AATAAA	-9	NA	62612381	62602225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610955_62611086_62611345_62611424
WTC11_00017407	chr11	-	2055	5	FSM	ENSG00000149541.10	ENST00000531383.5	2056	5	3	-2	3	1	multi-exon	FALSE	canonical	1	3	junction_1	76.4852927038918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTCTTGTTTTCCTTTG	-62622138	False	NA	-26	True	AATAAA	-17	NA	62622151	62615294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62616237_62616505_62616797_62616986_62617348_62620496_62620672_62621865
WTC11_00017408	chr11	-	671	5	NNC	ENSG00000278615.5	novel	646	4	NA	NA	0	43117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1186.8659096545	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTAGGCGTGATGGTG	-62628992	True	NA	NA	False	NA	NA	NA	62665210	62619699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62619725_62662816_62663160_62663235_62663334_62664848_62664974_62665130
WTC11_00017414	chr11	-	1984	12	FSM	ENSG00000168000.16	ENST00000405837.5	1984	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	183.739844830979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62709382	True	NA	-37	True	AATAAA	-19	NA	62709514	62690274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690874_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
WTC11_00017416	chr11	-	1633	10	NIC	ENSG00000168000.16	novel	1710	11	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_4	148.492507189279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGGGTGCTCTCCGA	-62707616	False	NA	NA	False	NA	NA	NA	62707628	62690413	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
WTC11_00017418	chr11	-	2229	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	37.6628464139396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62805406	False	NA	-12	True	TATAAA	-14	NA	62805421	62792129	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
WTC11_00017420	chr11	-	460	1	FSM	ENSG00000269463.1	ENST00000596971.1	382	1	-117	39	-117	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	683	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCATCTTTCCATGTCAA	NA	False	NA	NA	False	AATATA	-22	NA	62808180	62807720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62807700_62808200
WTC11_00017423	chr11	-	2470	6	FSM	ENSG00000255717.8	ENST00000670469.1	2470	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	28.1325434328288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCCTGTTTACTTTTTT	-62846462	False	NA	-51	True	AATAAA	-13	NA	62855564	62851990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62854552_62854887_62854939_62855132
WTC11_00017424	chr11	-	3228	3	FSM	ENSG00000255717.8	ENST00000664307.1	3228	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTCCTGTTTACTTT	-62846684	True	NA	-54	True	AATAAA	-10	NA	62855786	62851993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853116_62853551
WTC11_00017426	chr11	-	7180	14	NNC	ENSG00000184743.13	novel	6899	13	NA	NA	117	51230	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.2775791269546	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATATAGGCTTTAAAG	-63670165	True	NA	NA	False	AAAAAG	-5	NA	63671629	63572856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63572886_63624087_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
WTC11_00017427	chr11	-	3627	4	NIC	ENSG00000188070.9	novel	5716	5	NA	NA	-195	959	intron_retention	FALSE	canonical	3	10	junction_2	7.78888096369861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTGCTCTTTGTATT	-63768624	False	NA	NA	False	NA	NA	NA	63768970	63762343	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_63764599_63764867_63765255_63765806_63766305_63768483
WTC11_00017429	chr11	-	2996	13	NNC	ENSG00000167771.6	novel	2915	12	NA	NA	-56	15571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.0195558719449	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGGAGGTGCCATGTG	-63913545	True	NA	NA	False	NA	NA	NA	63917220	63895658	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63895687_63911232_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
WTC11_00017430	chr11	-	2911	12	NNC	ENSG00000167771.6	novel	2915	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	101.0321935436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGAGTTTTCTTTCC	-63913482	True	NA	-10	True	AATAAA	-7	NA	63917157	63911229	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914334_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
WTC11_00017431	chr11	-	598	4	FSM	ENSG00000173457.11	ENST00000392210.6	600	4	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	2504.09744219349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGCTCGGCTGGTCTC	-64245375	False	NA	-8	True	AATAAA	-25	NA	64246193	64244481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246053
WTC11_00017432	chr11	-	2300	3	FSM	ENSG00000110076.20	ENST00000464307.5	3232	3	918	14	918	-11	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAATTCCAACGGTCC	NA	False	NA	-14	True	AAAAAG	-12	NA	64623078	64606187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64608083_64620293_64620373_64622752
WTC11_00017433	chr11	-	2908	11	NNC	ENSG00000133895.18	novel	2960	10	NA	NA	0	76003	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.399031560481	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTGTGAGGTCATGCA	-64805789	True	NA	NA	False	NA	NA	NA	64810485	64727506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64727532_64803524_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810267
WTC11_00017434	chr11	-	573	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	10	0	10	0	multi-exon	FALSE	canonical	0	0	junction_4	72.6378000768195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64745300	True	NA	-1	True	AATAAA	-17	NA	64745323	64740865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
WTC11_00017435	chr11	-	2551	13	NIC	ENSG00000168066.21	novel	2850	13	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	231.914136409721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTGCTTCTTTATT	-64778443	False	NA	-28	True	AATAAA	-16	NA	64778459	64764611	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64765519_64766899_64767080_64767191_64767247_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
WTC11_00017437	chr11	-	2802	10	ISM	ENSG00000133895.18	ENST00000672304.1	2800	11	419	-28	0	0	3prime_fragment	FALSE	canonical	3	21	junction_4	163.041916900737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64810119	False	NA	-14	True	AATACA	-18	NA	64810132	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_64804817_64805033_64805199_64805634_64805771_64805887_64806014_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664
WTC11_00017438	chr11	-	2890	9	NIC	ENSG00000133895.18	novel	2960	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	149.565568815152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64805826	True	NA	-14	True	AATACA	-18	NA	64810522	64803513	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807551_64807681_64807890_64808100_64809664_64810133_64810267
WTC11_00017439	chr11	-	2384	2	FSM	ENSG00000110047.18	ENST00000484846.1	3469	2	1085	0	-483	0	multi-exon	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGGGTGCTTCCTTGTC	NA	False	NA	-2	True	ATTAAA	-20	NA	64855578	64852730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64854858_64855321
WTC11_00017440	chr11	-	226	2	FSM	ENSG00000110046.13	ENST00000472525.1	515	2	0	289	0	-289	multi-exon	FALSE	canonical	3	38	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATCACCCTTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	64897730	64897328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64897495_64897670
WTC11_00017441	chr11	-	2562	18	FSM	ENSG00000168060.16	ENST00000358658.8	2708	18	146	0	114	0	multi-exon	FALSE	canonical	0	0	junction_10	3.73425182308327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCCTTTTATTACCTG	-65058251	False	NA	NA	False	AATAAA	-29	NA	65058407	65044817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65046444_65046527_65047474_65047566_65047646_65047739_65047980_65048049_65048151_65048216_65048299_65048386_65053217_65053338_65053490_65053577_65054249_65054355_65054454_65054739_65057370_65057494_65057874_65057997_65058077_65058251_65058336
WTC11_00017442	chr11	-	3443	1	FSM	ENSG00000187066.9	ENST00000528029.1	4129	1	704	-18	622	18	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTGGGAACGGGGGA	NA	False	NA	NA	False	AATAAA	-31	NA	65088403	65084960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65085000_65088400
WTC11_00017443	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	2877.03937330645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	-65040349	True	NA	-12	True	AATAAA	-13	NA	65122153	65120637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
WTC11_00017444	chr11	-	2039	3	FSM	ENSG00000162241.13	ENST00000534338.1	2053	3	0	14	0	-11	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTAAATGATGCGACTG	NA	False	NA	-21	True	AATAAA	-3	NA	65378025	65375205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65375897_65376535_65376676_65376817
WTC11_00017445	chr11	-	466	1	FSM	ENSG00000260233.3	ENST00000623234.1	1942	1	1016	460	866	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCCAATATCCACTCAAC	-65569205	False	NA	NA	False	NA	NA	NA	65569407	65568941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65568900_65569400
WTC11_00017446	chr11	-	642	1	FSM	ENSG00000260233.3	ENST00000567594.1	614	1	-64	36	-64	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTGCAAGTTAAAATT	-65570135	True	NA	NA	False	NA	NA	NA	65570337	65569695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65569700_65570300
WTC11_00017447	chr11	-	765	3	FSM	ENSG00000173039.20	ENST00000526738.1	1022	3	141	116	141	0	multi-exon	FALSE	canonical	3	100	junction_1	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACATCAGGAGGCAGGG	-65660635	False	NA	NA	False	NA	NA	NA	65660651	65658717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65658823_65659665_65659798_65660123
WTC11_00017448	chr11	-	667	5	NNC	ENSG00000172922.11	novel	2645	4	NA	NA	0	13145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.071332565256	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAGGAATAAATCTAACCA	-65714317	True	NA	NA	False	AAAAAG	-1	NA	65720798	65700859	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65700893_65719683_65719810_65720044_65720165_65720241_65720418_65720586
WTC11_00017451	chr11	-	677	4	FSM	ENSG00000172638.13	ENST00000531645.5	674	4	0	-3	0	-2	multi-exon	FALSE	canonical	1	3	junction_1	32.9983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTTCAATCTTTT	-65868066	False	NA	-3	True	TATAAA	-18	NA	65868416	65866443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65866844_65866935_65867860_65868057_65868294
WTC11_00017452	chr11	-	1507	11	FSM	ENSG00000172638.13	ENST00000528176.5	1504	11	0	-3	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	19.848425630261	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTTCAATCTTTT	-65872393	False	NA	-3	True	TATAAA	-18	NA	65872743	65866443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
WTC11_00017457	chr11	-	946	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	-2	0	2	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGTCTGGAGAGTGCTC	-66479953	True	NA	NA	False	ATTAAA	-26	NA	66480231	66477343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66478097_66480038
WTC11_00017460	chr11	-	4146	23	FSM	ENSG00000173599.15	ENST00000529047.6	4248	23	0	102	0	1	multi-exon	FALSE	canonical	1	1	junction_21	25.3472169075557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCCTGTGCAGCCCC	-66956392	True	NA	2	True	AATAAA	-24	NA	66958383	66848518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66957868_66957997_66958321
WTC11_00017461	chr11	-	906	5	FSM	ENSG00000173599.15	ENST00000530259.1	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	22.7637321193165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCCACTGCACATCCAC	-66852933	False	NA	NA	False	NA	NA	NA	66852962	66850853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746
WTC11_00017462	chr11	-	283	1	FSM	ENSG00000287851.1	ENST00000661765.1	893	1	-22	632	-22	-632	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTAGAGATTAGTAGTT	-67317433	False	NA	NA	False	NA	NA	NA	67317453	67317170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67317200_67317500
WTC11_00017464	chr11	-	836	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	233.473767263048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGAGGCAATTGCTCTC	-67464489	True	NA	-15	True	AATAAA	-15	NA	67469221	67464359	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_67464662_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
WTC11_00017470	chr11	-	370	2	Genic_Genomic	ENSG00000239559.2	novel	287	1	NA	NA	0	46698	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCTAATTTTTCCATC	-67682323	False	NA	NA	False	NA	NA	NA	67683058	67636073	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_67636097_67682711
WTC11_00017472	chr11	-	209	1	FSM	ENSG00000254610.3	ENST00000642106.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	-67955533	False	NA	NA	False	NA	NA	NA	67955690	67955481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67955500_67955700
WTC11_00017473	chr11	-	759	6	FSM	ENSG00000110057.8	ENST00000528423.1	833	6	74	0	74	0	multi-exon	FALSE	canonical	0	0	junction_5	70.4255635405213	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGCTGTACAATGTGCA	-68004879	False	NA	NA	False	NA	NA	NA	68004908	67998386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67998453_67999172_67999306_67999518_67999681_68003021_68003176_68003656_68003799_68004806
WTC11_00017475	chr11	-	1035	3	NNC	ENSG00000255306.1	novel	739	4	NA	NA	328	9912	intron_retention	FALSE	canonical	2	7	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCCTGGAGGCGGGG	-68030116	False	NA	NA	False	NA	NA	NA	68030133	68014896	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68015406_68029283_68029421_68029744
WTC11_00017476	chr11	-	6110	12	NNC	ENSG00000110066.15	novel	2475	12	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	136.64915563419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCGGTGTTCACTGTA	-68211415	True	NA	NA	False	AATAAA	-18	NA	68213327	68154862	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68179469_68179831_68180131_68180201_68185780_68185929_68189916_68190153_68213137
WTC11_00017477	chr11	-	2669	9	NIC	ENSG00000110066.15	novel	1599	11	NA	NA	74	0	intron_retention	FALSE	canonical	2	4	junction_3	108.689925936123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	-68213742	False	NA	-4	True	AATAAA	-15	NA	68213754	68165718	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68167179_68171014_68171152_68171231_68171297_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
WTC11_00017482	chr11	-	7836	4	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	327	0	intron_retention	FALSE	canonical	3	19	junction_2	71.7882689271413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-68751122	False	NA	-1	True	AATAAA	-16	NA	68751133	68736131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68738789_68742317_68747367_68750189
WTC11_00017483	chr11	-	3495	5	FSM	ENSG00000132749.11	ENST00000443940.6	3495	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	69.9405997972565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-68750003	True	NA	-1	True	AATAAA	-16	NA	68751467	68736131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68738789_68744990_68745112_68747207_68747367_68750189_68750700_68751419
WTC11_00017485	chr11	-	398	2	FSM	ENSG00000132749.11	ENST00000538944.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	-68747356	False	NA	3	True	ATTAAA	-17	NA	68747366	68744872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68745112_68747207
WTC11_00017486	chr11	-	669	8	NNC	ENSG00000197345.13	novel	693	7	NA	NA	0	3218	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	539.794896800854	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAATGCTTTTCAAGTTC	-68890157	True	NA	NA	False	AAAAAG	-1	NA	68903778	68888057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68888088_68891277_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
WTC11_00017487	chr11	-	723	8	NNC	ENSG00000197345.13	novel	693	7	NA	NA	-5	3218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	642.931551249304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAATGCTTTTCAAGTTC	-68890198	True	NA	NA	False	AAAAAG	-1	NA	68903819	68888057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68888088_68891277_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
WTC11_00017489	chr11	-	2591	3	NNC	ENSG00000172935.9	novel	2132	3	NA	NA	2110	6	intron_retention	TRUE	canonical	1	2	junction_2	12.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCATGCCCACAGTCCTA	-69010859	False	277	-13	True	AATAAA	-26	NA	69011136	69004388	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_69006262_69009853_69009958_69010522
WTC11_00017490	chr11	-	609	3	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	2.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	-70212303	False	NA	NA	False	NA	NA	NA	70212352	70208140	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_70208578_70209149_70209258_70212288
WTC11_00017491	chr11	-	2109	2	FSM	ENSG00000246889.3	ENST00000500185.2	2602	2	31	462	31	-462	multi-exon	FALSE	canonical	1	2	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTATAAATGTCGACT	-70397748	True	NA	NA	False	GATAAA	-18	NA	70398457	70373871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70375621_70398097
WTC11_00017492	chr11	-	454	5	FSM	ENSG00000162105.21	ENST00000426687.2	460	5	6	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	14.7394029729837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCGCGCTGCTGAGAACA	NA	False	NA	NA	False	GATAAA	-30	NA	70698763	70492431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70492466_70502795_70502932_70659827_70659953_70661595_70661679_70698687
WTC11_00017493	chr11	-	837	4	FSM	ENSG00000172893.18	ENST00000533800.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	406.426978544595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCGTGCGCGTTATCC	-71423875	False	50	-23	True	AATAAA	-8	NA	71438959	71434964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435191_71435441_71435840_71437811_71437944_71438878
WTC11_00017541	chr11	-	4045	21	NIC	ENSG00000073921.18	novel	4134	20	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	35.4105916358369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGTTGTACTTTTATAA	-86064794	True	NA	-10	True	ATTAAA	-18	NA	86068984	85957172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
WTC11_00017545	chr11	-	6119	6	FSM	ENSG00000109861.17	ENST00000533897.2	6119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_2	235.050973195177	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311904	True	NA	-6	True	AATAAA	-19	NA	88337720	88293591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
WTC11_00017546	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_5	761.464083867656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311922	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
WTC11_00017550	chr11	-	1735	14	FSM	ENSG00000166012.17	ENST00000526015.5	1735	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	177.057741392412	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATGCTTGAAAAATTAA	-93734001	True	NA	-27	True	AATAAA	-22	NA	93741493	93730193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733506_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
WTC11_00017551	chr11	-	1068	8	ISM	ENSG00000166012.17	ENST00000393259.6	547	10	1506	-9	3	0	3prime_fragment	FALSE	canonical	0	0	junction_2	186.599975938927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93727743	False	NA	-11	True	ATTAAA	-24	NA	93735235	93730271	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624
WTC11_00017557	chr11	-	2509	19	NNC	ENSG00000020922.13	novel	2588	19	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	77.9809449659196	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCTATTTCATAATGA	-94490144	True	NA	NA	False	AATAAA	-12	NA	94493808	94419884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485927_94486085_94490832_94490966_94492781_94492907_94493683
WTC11_00017559	chr11	-	3760	10	NIC	ENSG00000077458.13	novel	3932	10	NA	NA	35	0	intron_retention	FALSE	canonical	3	42	junction_9	52.1950283806257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	-95789574	True	NA	-4	True	AATAAA	-16	NA	95790374	95768952	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_95771651_95775921_95776024_95778821_95778958_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95790155
WTC11_00017566	chr11	-	1007	7	FSM	ENSG00000110660.15	ENST00000533664.1	1007	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	91.0744506190158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCCCCCACCAGGATAA	-107857357	True	NA	NA	False	NA	NA	NA	107858808	107792597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107858657
WTC11_00017570	chr11	-	422	3	NNC	ENSG00000150779.12	novel	741	3	NA	NA	0	5658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1039.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGGGCCTCCTATGTA	-112070083	True	NA	NA	False	NA	NA	NA	112086722	112079141	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_112079163_112085144_112085463_112086639
WTC11_00017571	chr11	-	3998	19	NIC	ENSG00000048028.11	novel	3431	22	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	2	29	junction_14	225.523294080322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865219	True	NA	-2	True	AATAAA	-19	NA	113875533	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113823604_113823701_113827232_113827361_113829196_113829346_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
WTC11_00017572	chr11	-	4920	25	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-14	4	combination_of_known_junctions	FALSE	canonical	3	53	junction_23	169.637353189745	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-113865236	True	NA	-2	True	AATAAA	-19	NA	113875550	113797869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874516_113874880_113875444
WTC11_00017581	chr11	-	1663	8	NIC	ENSG00000137726.17	novel	1929	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	61.2135772587775	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGAGGTGCTTTCCTTT	-117874624	True	NA	-6	True	AATAAA	-21	NA	117876643	117836977	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842026_117842718_117842782_117876591
WTC11_00017584	chr11	-	2006	13	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-97	6826	-97	0	5prime_fragment	FALSE	canonical	3	455	junction_12	34.2039430800342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118791170	False	NA	-38	True	AATAAA	-13	NA	118791261	118754588	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
WTC11_00017590	chr11	-	503	5	NIC	ENSG00000248712.8	novel	1701	7	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	7.76208734813001	2110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATAGAGCTGTGGGCT	-119195528	True	NA	-39	True	AATAAA	-16	NA	119195829	119190259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119190453_119190709_119190841_119194922_119194995_119195423_119195500_119195798
WTC11_00017593	chr11	-	2316	11	NNC	ENSG00000109971.14	novel	2264	9	NA	NA	0	78710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4082.98976731512	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTACCGACACCCCAA	-123007278	True	NA	NA	False	AAAAAG	-17	NA	123062124	122978778	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_122978823_123008206_123008230_123057491_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
WTC11_00017597	chr11	-	599	3	FSM	ENSG00000120458.13	ENST00000634413.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCACTATGGAGGACTA	-124800353	False	NA	NA	False	NA	NA	NA	124800364	124774803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124774819_124779049_124779140_124799870
WTC11_00017602	chr11	-	8108	20	FSM	ENSG00000064309.16	ENST00000684078.1	9135	20	5	1022	5	3	multi-exon	TRUE	canonical	1	2	junction_1	11.4838197627571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTAAGCTTCTCAATT	-126063299	True	NA	-16	True	AATAAA	-26	NA	126063330	125956817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125961106_125961654_125961999_125978303_125978384_125981048_125981330_125983871_125984094_125989636_125989760_125994283_125994390_125994870_125995053_125997206_125997411_126001718_126001851_126003901_126004077_126005758_126006058_126010340_126010695_126015240_126015511_126017087_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126063271
WTC11_00017606	chr11	-	5431	28	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	0	3568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.9668354645071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTACCTGGGATGTGCTT	-129892350	True	NA	NA	False	NA	NA	NA	129895557	129860067	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129860313_129863601_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
WTC11_00017613	chr11	+	2640	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCCCTAAATGTAAA	43864523	False	NA	7	True	ATTAAA	-16	NA	43864543	43867183	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_43864500_43867200
WTC11_00017614	chr11	+	1057	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGAAGATGTCATG	NA	False	NA	NA	False	NA	NA	NA	57413475	57414532	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57413500_57414500
WTC11_00017615	chr11	+	241	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTACAACTACATCTCA	NA	False	NA	NA	False	ACTAAA	-24	NA	66576178	66576419	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_66576200_66576400
WTC11_00017620	chr11_KI270721v1_random	+	714	5	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1167	junction_1	234.111618677929	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCTTCCTTCTTCTC	NA	False	NA	NA	False	AATAAA	-28	NA	2611	11803	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_KI270721v1_random_+_2693_6093_6217_7321_7405_7976_8051_11450
WTC11_00017623	chr12	+	2317	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	-64	0	-64	0	multi-exon	FALSE	canonical	3	91	junction_2	27.0860276261024	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398760	True	NA	15	True	AATAAA	-16	NA	401572	442642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
WTC11_00017624	chr12	+	2307	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	-7	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	34.5265598247687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398824	True	NA	15	True	AATAAA	-16	NA	401636	442642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
WTC11_00017626	chr12	+	5485	20	NIC	ENSG00000139044.12	novel	5493	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	10.8231822602332	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGTGCTTGT	459465	True	NA	NA	False	ATTAAA	-17	NA	459938	563498	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553190_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
WTC11_00017627	chr12	+	5503	20	FSM	ENSG00000139044.12	ENST00000266383.10	5493	20	-10	0	-10	0	multi-exon	FALSE	canonical	3	16	junction_13	13.202450876306	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGTCTTTTCCTGTT	459455	True	NA	NA	False	ATTAAA	-28	NA	459928	563509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553193_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
WTC11_00017628	chr12	+	729	7	FSM	ENSG00000139044.12	ENST00000535680.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	11.0264832713487	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCTCCCGGCAACCGGG	460453	False	NA	NA	False	NA	NA	NA	460469	546828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645
WTC11_00017630	chr12	+	2325	3	FSM	ENSG00000060237.19	ENST00000447667.2	1902	3	-520	97	-43	-97	multi-exon	FALSE	canonical	3	31	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATAGGATTCTCTATAT	750412	True	NA	NA	False	AAGAAA	-41	NA	752535	827404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_754325_813641_813815_827041
WTC11_00017631	chr12	+	9900	26	FSM	ENSG00000060237.19	ENST00000535572.5	9886	26	-14	0	0	0	multi-exon	TRUE	canonical	1	1	junction_20	19.1045125559382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGGTTTCTCAGCAG	750455	True	NA	4	True	AATAAA	-15	NA	752578	911300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878214_878362_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890511_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00017632	chr12	+	10796	28	FSM	ENSG00000060237.19	ENST00000315939.11	10796	28	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	18.0005334473614	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	750455	True	NA	23	True	AATAAA	-20	NA	752578	911452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878211_878362_879572_880032_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00017633	chr12	+	11175	27	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	0	463	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	17.5826450878138	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGCCTGAGGCAGGAGAA	750455	True	NA	NA	False	NA	NA	NA	752578	911915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878211_878362_879572_880032_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00017634	chr12	+	10229	26	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_20	16.8154214933792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	750479	True	NA	23	True	AATAAA	-20	NA	752602	911452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878211_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00017639	chr12	+	9390	18	NIC	ENSG00000082805.21	novel	7040	20	NA	NA	7	-7	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	21.3955982925829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGTGCTGTGTCCTT	991202	False	NA	11	True	TATAAA	-8	NA	991214	1495924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
WTC11_00017640	chr12	+	9309	19	FSM	ENSG00000082805.21	ENST00000360905.9	9308	19	-8	7	7	-7	multi-exon	FALSE	canonical	3	47	junction_1	16.6199344830905	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGTGCTGTGTCCTT	991202	False	NA	11	True	TATAAA	-8	NA	991214	1495924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
WTC11_00017641	chr12	+	9234	18	FSM	ENSG00000082805.21	ENST00000543086.7	9241	18	7	0	7	0	multi-exon	FALSE	canonical	3	38	junction_5	19.8182049054585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTTCTTTGAGTG	991202	False	NA	20	True	TATAAA	-17	NA	991214	1495933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
WTC11_00017647	chr12	+	4021	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	13.5058566283411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	1688824	True	NA	NA	False	AATAAA	-16	NA	1691041	1788674	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
WTC11_00017648	chr12	+	4034	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	-63	0	-63	0	multi-exon	FALSE	canonical	3	19	junction_1	22.4871845589383	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	1688789	True	NA	NA	False	AATAAA	-16	NA	1691006	1788674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
WTC11_00017649	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_3	72.1194140058224	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	2767575	True	NA	18	True	ATTAAA	-29	NA	2794969	2805423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
WTC11_00017650	chr12	+	572	3	FSM	ENSG00000004478.8	ENST00000538622.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTTGGTCACTGAG	2796625	False	NA	NA	False	NA	NA	NA	2796680	2797871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2796965_2797137_2797283_2797728
WTC11_00017654	chr12	+	2340	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	91	junction_11	18.9688740261034	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	2810880	True	NA	18	True	AATAAA	-24	NA	2812647	2825076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
WTC11_00017656	chr12	+	1479	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	-93	-799	0	597	multi-exon	FALSE	canonical	3	97	junction_3	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGACCATCCTGGCTAA	2810900	True	NA	NA	False	NA	NA	NA	2812667	2819257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
WTC11_00017664	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	2871377	True	NA	NA	False	NA	NA	NA	2877198	2888137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885262_2885535_2887910
WTC11_00017665	chr12	+	1655	3	FSM	ENSG00000171792.11	ENST00000461997.5	1655	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	159.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACATAGATGAGTTCT	2871377	True	NA	-24	True	NA	NA	NA	2877198	2889271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885282_2885493_2887910
WTC11_00017666	chr12	+	1614	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	-9	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	2871377	True	NA	-9	True	NA	NA	NA	2877198	2889440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2887910
WTC11_00017667	chr12	+	1815	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	27	84	27	0	multi-exon	FALSE	canonical	3	342	junction_1	32.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	2871428	True	NA	-9	True	NA	NA	NA	2877249	2889440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885282_2885535_2887910
WTC11_00017668	chr12	+	3089	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	-9	0	-5	0	multi-exon	FALSE	canonical	3	93	junction_8	13.7477270848675	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	2887362	True	NA	101	True	AATAAA	-19	NA	2890881	2941138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
WTC11_00017669	chr12	+	1971	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	-20	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	35.2968521060312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	2887367	True	NA	93	True	AATAAA	-11	NA	2890886	2941130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
WTC11_00017670	chr12	+	2812	10	NIC	ENSG00000078246.17	novel	3080	11	NA	NA	1	-83	intron_retention	FALSE	canonical	3	11	junction_2	37.4594430890691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATTTGTGTGTGCAGGT	2887388	True	NA	10	True	TATAAA	-10	NA	2890907	2941047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2890989_2909528_2909581_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
WTC11_00017671	chr12	+	7461	14	Fusion	ENSG00000250899.3_ENSG00000197905.10	novel	1710	13	NA	NA	-361	1077	multi-exon	TRUE	non_canonical	2	48	junction_13	79.7394425502515	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTGTGCGTGATCTT	2958957	True	NA	15	True	AGTAAA	-20	NA	2958968	3046027	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364_3043441_3043468
WTC11_00017672	chr12	+	1766	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	-67	11	0	0	multi-exon	FALSE	canonical	3	230	junction_2	41.047651847849	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953819	True	NA	14	True	AATAAA	-17	NA	2959329	3040665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
WTC11_00017673	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	92.1415547714628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953819	True	NA	14	True	AATAAA	-17	NA	2959329	3040665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
WTC11_00017675	chr12	+	580	3	FSM	ENSG00000197905.10	ENST00000536826.2	570	3	-10	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTATGGTAAGGAGCCC	2953886	True	NA	NA	False	NA	NA	NA	2959396	2994983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960197_2994737
WTC11_00017677	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	94.8261567290376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	2959230	True	NA	20	True	AATAAA	-23	NA	2959916	3040671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
WTC11_00017681	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5.1234753829798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	3073724	True	NA	13	True	AATAAA	-23	NA	3077378	3286559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
WTC11_00017682	chr12	+	4260	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	24	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.3101002359368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	3073724	True	NA	18	True	AATAAA	-28	NA	3077378	3286564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
WTC11_00017683	chr12	+	3614	2	NNC	ENSG00000256969.2	novel	1003	5	NA	NA	-2089	-2458	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACCAGGAATACAGAACT	4017666	True	NA	NA	False	NA	NA	NA	4018887	4024155	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4019140_4020793
WTC11_00017684	chr12	+	2084	2	FSM	ENSG00000256969.2	ENST00000543206.1	542	2	-1542	0	-1542	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	4019424	False	NA	38	True	AATAAA	-19	NA	4019434	4026658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4021082_4026221
WTC11_00017685	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	47.7827113085894	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	4259055	True	NA	16	True	AATAAA	-17	NA	4273761	4305353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
WTC11_00017686	chr12	+	6532	6	FSM	ENSG00000118971.9	ENST00000675880.1	6532	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	503.21049273639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	4259055	True	NA	13	True	AATAAA	-14	NA	4273761	4305350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4285274_4285317_4288841_4288991_4299859
WTC11_00017687	chr12	+	474	2	FSM	ENSG00000118971.9	ENST00000536795.1	572	2	92	6	-40	-6	multi-exon	FALSE	canonical	3	958	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAAAAGCTGTGCACGG	4278597	True	NA	NA	False	NA	NA	NA	4278759	4289155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4278920_4288841
WTC11_00017688	chr12	+	8229	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	240	junction_5	12.0266371026983	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	4318321	True	NA	NA	False	ATTAAA	-19	NA	4321192	4360028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
WTC11_00017690	chr12	+	2225	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	-62	0	30	0	multi-exon	FALSE	canonical	3	43	junction_3	151.242263346666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532811	True	NA	19	True	ATTAAA	-16	NA	4538827	4560047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
WTC11_00017691	chr12	+	1050	8	FSM	ENSG00000111247.15	ENST00000398012.7	1036	8	-14	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	183.851648269545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAATCACAGCTTTACA	4532852	True	NA	NA	False	NA	NA	NA	4538868	4559019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556551_4558856
WTC11_00017694	chr12	+	2133	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	-21	0	0	0	multi-exon	FALSE	canonical	3	325	junction_7	50.6802168010359	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532852	True	NA	19	True	ATTAAA	-16	NA	4538868	4560047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
WTC11_00017699	chr12	+	560	3	FSM	ENSG00000010219.14	ENST00000536137.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAGAGATTAAGTGACC	4604166	True	NA	NA	False	NA	NA	NA	4604956	4610523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4605087_4607326_4607388_4610154
WTC11_00017700	chr12	+	858	5	ISM	ENSG00000010219.14	ENST00000543431.6	2065	15	42746	3	-3	-1	3prime_fragment	FALSE	canonical	3	27	junction_4	17.3997126413053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAACATGGCCAATTGG	4604163	True	NA	18	True	CATAAA	-19	NA	4604953	4613872	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4605087_4607326_4607388_4610154_4610285_4612542_4612719_4613514
WTC11_00017701	chr12	+	2249	4	ISM	ENSG00000010219.14	ENST00000010132.6	1840	12	15437	65	800	0	3prime_fragment	FALSE	canonical	3	37	junction_1	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGACTGTTTTTTTT	4604966	False	NA	16	True	NA	NA	NA	4605756	4613823	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4607388_4610154_4610285_4612542_4612719_4613511
WTC11_00017705	chr12	+	938	3	FSM	ENSG00000139180.11	ENST00000544679.1	782	3	-32	-124	-8	124	multi-exon	FALSE	canonical	3	1014	junction_1	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATTAAAATAATATTTT	4634934	True	NA	NA	False	AATATA	-33	NA	4649086	4655502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4649176_4654291_4654463_4654824
WTC11_00017706	chr12	+	1596	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	-27	6787	-8	297	multi-exon	FALSE	canonical	3	1014	junction_1	39.8968670449197	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATTTATTTTAAT	4634934	True	NA	41	True	NA	NA	NA	4649086	4687530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
WTC11_00017712	chr12	+	6596	2	FSM	ENSG00000130035.9_ENSG00000151079.7	ENST00000541339.2	1632	2	-5019	55	142	-55	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACAATGTGTGGTGAAT	4809043	True	NA	NA	False	NA	NA	NA	4809317	4851872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4814779_4850737
WTC11_00017713	chr12	+	2376	1	FSM	ENSG00000130037.5	ENST00000252321.5	2910	1	17	517	17	-517	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAGAGGGATAACCCAA	NA	False	NA	NA	False	NA	NA	NA	5043895	5046271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_5043900_5046300
WTC11_00017714	chr12	+	1346	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	5431989	True	NA	20	True	AGTAAA	-14	NA	5432102	5495299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_5432343_5494193
WTC11_00017715	chr12	+	1430	9	FSM	ENSG00000010278.15	ENST00000538834.6	1432	9	0	2	0	-2	multi-exon	FALSE	canonical	3	11	junction_1	939.094477408956	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGACTGGTTTTTGT	6199532	True	NA	6	True	AATAAA	-13	NA	6199874	6238257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200073_6200383_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
WTC11_00017716	chr12	+	1252	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	-65	38	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	161.502637875721	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTGATACATAATAAAAAA	6188959	True	NA	-23	True	NA	NA	NA	6200334	6238228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
WTC11_00017718	chr12	+	1205	9	NNC	ENSG00000010278.15	novel	1566	9	NA	NA	0	9928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	942.685185719496	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGACAGTAGAGATCATA	6189060	True	NA	NA	False	NA	NA	NA	6200435	6248199	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762_6238258_6248174
WTC11_00017720	chr12	+	2979	16	FSM	ENSG00000008323.16	ENST00000684764.1	2969	16	-10	0	-10	0	multi-exon	TRUE	canonical	3	88	junction_6	17.6554681488641	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	6309526	True	NA	15	True	AATATA	-40	NA	6310671	6328506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
WTC11_00017722	chr12	+	2223	10	FSM	ENSG00000111321.11	ENST00000228918.9	2134	10	-83	-6	-83	1	multi-exon	FALSE	canonical	2	6	junction_3	3.43187671366233	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTTGGGATTTATA	6383853	True	NA	10	True	AATAAA	-21	NA	6384078	6391572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6384455_6384587_6384685_6385021_6385148_6385226_6385380_6386065_6386163_6386346_6386445_6388397_6388506_6388799_6388826_6390111_6390341_6390659
WTC11_00017723	chr12	+	1140	2	FSM	ENSG00000111321.11	ENST00000441074.3	2327	2	1186	1	1186	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTCTTGGGATTTA	6389886	False	NA	8	True	AATAAA	-19	NA	6390111	6391570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6390341_6390659
WTC11_00017724	chr12	+	533	6	FSM	ENSG00000010292.13	ENST00000539714.5	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	185.464174438084	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTGTTATGCTCTGAT	6491896	True	NA	NA	False	NA	NA	NA	6493386	6510720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6493504_6494115_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628
WTC11_00017725	chr12	+	5106	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	-282	1	-273	-1	multi-exon	TRUE	canonical	3	407	junction_6	97.4228796627866	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTTTCCTAAGCTT	6492329	False	NA	33	True	AATAAA	-18	NA	6493819	6531954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
WTC11_00017726	chr12	+	339	1	FSM	ENSG00000239002.3	ENST00000459255.1	330	1	4	-13	4	13	mono-exon	FALSE	NA	NA	NA	NA	NA	2656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGGGGTATAT	6510205	True	NA	NA	False	NA	NA	NA	6510225	6510564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6510200_6510600
WTC11_00017732	chr12	+	1370	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	-22	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	8558.92833537003	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	5989531	True	NA	19	True	AATAAA	-7	NA	6534511	6538359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
WTC11_00017733	chr12	+	1290	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	-5	0	0	0	multi-exon	FALSE	canonical	3	21253	junction_1	1792.38254496634	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	5989531	True	NA	31	True	AATAAA	-19	NA	6534511	6538371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
WTC11_00017734	chr12	+	1444	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	-213	25	0	0	multi-exon	FALSE	canonical	3	24885	junction_4	849.448392445693	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	5989560	False	NA	-26	True	NA	NA	NA	6534540	6538314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
WTC11_00017736	chr12	+	1363	7	FSM	ENSG00000111640.15	ENST00000466588.5	1363	7	0	0	0	0	multi-exon	FALSE	canonical	3	24885	junction_3	853.941531305797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGAGCCGCACCTTGTC	6534251	False	NA	-23	True	NA	NA	NA	6534753	6538317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
WTC11_00017737	chr12	+	1720	4	FSM	ENSG00000111640.15	ENST00000466525.1	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	25516	junction_1	511.04859521054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACCATCAATAAAGTAC	6534222	False	NA	-3	True	NA	NA	NA	6534791	6538337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6537997_6538100
WTC11_00017738	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	8918.08294353417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	6535167	False	NA	-25	True	NA	NA	NA	6535301	6538315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
WTC11_00017740	chr12	+	1855	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	-24	0	8	0	multi-exon	FALSE	canonical	3	252	junction_1	71.7831200668417	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6723901	True	NA	40	True	AATAAA	-24	NA	6724021	6731865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
WTC11_00017742	chr12	+	588	4	FSM	ENSG00000111652.10	ENST00000540408.5	569	4	-19	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	190.424671604169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAACCAGCGGCTCGAGGT	6721861	True	NA	NA	False	NA	NA	NA	6724070	6729360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724251_6724613_6724819_6728222_6728312_6729246
WTC11_00017743	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	125.749670344843	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	6721861	True	NA	11	True	ATTAAA	-18	NA	6724070	6731807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
WTC11_00017747	chr12	+	2036	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	425	junction_2	22.2617010431219	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	6723544	True	NA	50	True	AATAAA	-34	NA	6724284	6731875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
WTC11_00017748	chr12	+	2058	5	ISM	ENSG00000111652.10	ENST00000543939.5	1728	7	177	19	2	-2	intron_retention	FALSE	canonical	3	54	junction_1	169.200140366372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCATATATCTATATATAA	6723555	False	NA	9	True	ATTAAA	-16	NA	6724295	6731805	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668
WTC11_00017750	chr12	+	1591	5	FSM	ENSG00000159335.18	ENST00000389462.8	773	5	-364	-454	-352	0	multi-exon	FALSE	canonical	3	42	junction_2	640.887860705756	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6765985	False	NA	30	True	AATAAA	-26	NA	6766010	6770952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6766751_6769602_6769675_6769843_6770000_6770156_6770219_6770391
WTC11_00017751	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_2	173.207065387068	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6745327	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
WTC11_00017753	chr12	+	670	2	FSM	ENSG00000089692.9	ENST00000541049.1	684	2	0	14	0	-14	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGCAGCAAGCCTGA	6777431	False	NA	-10	True	AATAAA	-4	NA	6777449	6778441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6777922_6778243
WTC11_00017755	chr12	+	1548	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	62	0	-55	0	multi-exon	FALSE	canonical	3	6	junction_2	6.74536878161602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821492	False	NA	11	True	ATTAAA	-23	NA	6821765	6827421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
WTC11_00017756	chr12	+	2631	15	FSM	ENSG00000110811.20	ENST00000290510.10	2631	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	19.2555319377077	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	6826806	True	NA	24	True	AATAAA	-19	NA	6828406	6839847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6828939_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
WTC11_00017757	chr12	+	616	2	FSM	ENSG00000111664.11	ENST00000542868.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCGGACGCGGCGGA	NA	False	NA	NA	False	NA	NA	NA	6841040	6843001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6841625_6842969
WTC11_00017758	chr12	+	997	2	FSM	ENSG00000111664.11	ENST00000542751.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCTAAGACACCTGCA	NA	False	NA	-37	True	NA	NA	NA	6845366	6847352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6845803_6846791
WTC11_00017759	chr12	+	3331	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	-248	0	-248	0	multi-exon	FALSE	canonical	3	630	junction_1	53.4620791385555	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	NA	False	NA	4	True	AATAAA	-4	NA	6851899	6866620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
WTC11_00017760	chr12	+	3164	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	-2	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	161.86592037018	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	6837458	True	NA	16	True	AATAAA	-16	NA	6852147	6866632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
WTC11_00017761	chr12	+	2542	14	FSM	ENSG00000111667.14	ENST00000537267.5	2522	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	658	junction_4	49.97324728079	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	6857358	False	NA	16	True	AATAAA	-16	NA	6857380	6866632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
WTC11_00017763	chr12	+	768	5	FSM	ENSG00000111667.14	ENST00000542371.1	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	312.31824714544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGGAAGACCACCTGG	6863313	False	NA	NA	False	NA	NA	NA	6863335	6866104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6863378_6863829_6864196_6864721_6864876_6865163_6865249_6865983
WTC11_00017764	chr12	+	1763	7	FSM	ENSG00000111669.15	ENST00000229270.8	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	12468	junction_6	629.968098839581	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTATTTTTACTTG	NA	False	NA	26	True	AAGAAA	-35	NA	6867118	6870948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6867682_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
WTC11_00017765	chr12	+	2151	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	-675	111	19	-111	multi-exon	FALSE	canonical	2	192	junction_1	4963.81021886301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTGTCTGCCTT	NA	False	NA	17	True	AATAAA	-13	NA	6867438	6870828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
WTC11_00017768	chr12	+	445	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	142	0	-32	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	6873025	True	NA	NA	False	NA	NA	NA	6873620	6884438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6873782_6883703_6883920_6884370
WTC11_00017771	chr12	+	1105	1	FSM	ENSG00000248593.3	ENST00000602547.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	NA	False	NA	19	True	AATAAA	-31	NA	6884681	6885786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6884700_6885800
WTC11_00017772	chr12	+	2573	12	FSM	ENSG00000111674.9	ENST00000541477.5	2549	12	-24	0	-24	0	multi-exon	TRUE	canonical	3	52	junction_1	120.370639730338	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTGTCTAAGGAGTC	6914291	False	NA	21	True	ATTAAA	-15	NA	6914302	6923696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
WTC11_00017773	chr12	+	557	5	FSM	ENSG00000111674.9	ENST00000539713.5	543	5	-14	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	152.200525623271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGAGGGAAGGACCGA	6908869	True	NA	NA	False	NA	NA	NA	6914579	6917259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6916730_6917037
WTC11_00017774	chr12	+	842	5	FSM	ENSG00000111674.9	ENST00000542509.1	825	5	-17	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	162.396890364317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGGTGAGCAATAAGCCA	6908869	True	NA	NA	False	NA	NA	NA	6914579	6917709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6917108_6917580
WTC11_00017775	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_1	64.1246204054945	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	6908869	True	NA	22	True	ATTAAA	-16	NA	6914579	6923697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
WTC11_00017776	chr12	+	2827	11	FSM	ENSG00000111674.9	ENST00000535366.5	2827	11	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	42.8947549241163	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTGTCTAAGGAGTC	6915181	False	NA	21	True	ATTAAA	-15	NA	6915206	6923696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
WTC11_00017777	chr12	+	724	5	FSM	ENSG00000111674.9	ENST00000535275.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	206.022450232978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGACGTGGAACCT	6919563	False	NA	NA	False	NA	NA	NA	6919573	6922810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6919764_6921496_6921783_6922055_6922165_6922343_6922403_6922730
WTC11_00017780	chr12	+	2017	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9689	0	-50	0	3prime_fragment	FALSE	canonical	3	78	junction_1	17.5783958312469	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6937637	False	NA	28	True	AAAACA	-21	NA	6937647	6942321	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
WTC11_00017781	chr12	+	909	2	FSM	ENSG00000111678.11	ENST00000544681.1	980	2	-1	72	-1	-40	multi-exon	FALSE	canonical	3	1017	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGTCTGAATAATTTT	6942532	True	NA	NA	False	NA	NA	NA	6943815	6945026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475
WTC11_00017782	chr12	+	680	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	-18	0	-1	0	multi-exon	FALSE	canonical	3	132	junction_2	442.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6942532	True	NA	15	True	AATAAA	-16	NA	6943815	6946002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475_6944566_6945770
WTC11_00017783	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	60	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6927076	True	NA	15	True	AATAAA	-16	NA	6944021	6946002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475_6944653_6945770
WTC11_00017784	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	6943988	False	NA	9	True	AATAAA	-10	NA	6944121	6945996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944379_6944653_6945770
WTC11_00017785	chr12	+	583	3	FSM	ENSG00000111679.17	ENST00000543120.5	564	3	-19	0	-16	0	multi-exon	FALSE	canonical	3	5	junction_1	43	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGGCCCAGGCTCCC	6945094	True	NA	NA	False	NA	NA	NA	6946557	6954939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6946740_6951911_6952178_6954804
WTC11_00017787	chr12	+	2176	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	-19	2	-16	-2	multi-exon	TRUE	canonical	3	69	junction_1	25.4816709725943	3216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGCCTCTGAGCCCTT	6945094	True	NA	8	True	AATAAA	-16	NA	6946557	6961314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
WTC11_00017788	chr12	+	538	4	FSM	ENSG00000111679.17	ENST00000534900.5	538	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	48.0485865210067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGACCTTCGACAGCC	6945146	True	NA	NA	False	NA	NA	NA	6946609	6955173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6946740_6951982_6952178_6954804_6954995_6955150
WTC11_00017792	chr12	+	2412	15	FSM	ENSG00000111679.17	ENST00000416215.6	2412	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	35.1849341599034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6951338	False	NA	10	True	AATAAA	-18	NA	6951355	6961316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6951521_6951608_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
WTC11_00017796	chr12	+	229	1	FSM	ENSG00000207708.1	ENST00000384975.1	95	1	-151	17	-151	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCCGGGTGGGTTCTCT	6963457	False	NA	NA	False	NA	NA	NA	6963945	6964174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6963900_6964200
WTC11_00017797	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_4	41.2960046493604	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	6957764	True	NA	4	True	AATAAA	-16	NA	6970912	6979936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
WTC11_00017800	chr12	+	2788	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	184	0	14	0	multi-exon	FALSE	canonical	3	12	junction_4	6.81999975764038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	7060511	True	NA	6	True	AATAAA	-18	NA	7060698	7071032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
WTC11_00017801	chr12	+	4055	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	-42	0	-42	0	multi-exon	TRUE	canonical	3	61	junction_4	12.2389700360468	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	NA	False	NA	NA	False	AATAAA	-22	NA	7130328	7158945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
WTC11_00017802	chr12	+	910	4	FSM	ENSG00000139182.15	ENST00000540931.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	7.58653778449403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTGCTACTCTTGTTT	7135435	False	NA	NA	False	NA	NA	NA	7135448	7137315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7135536_7135803_7135954_7136205_7136392_7136828
WTC11_00017805	chr12	+	3676	16	FSM	ENSG00000139197.11	ENST00000420616.6	2477	16	-2	-1197	-2	0	multi-exon	FALSE	canonical	3	39	junction_1	26.1559426007424	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187096	True	NA	16	True	AATAAA	-25	NA	7189712	7211459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00017806	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	25.4235236652112	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187069	True	NA	16	True	AATAAA	-25	NA	7189685	7211459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00017807	chr12	+	3247	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	5	0	5	0	multi-exon	FALSE	canonical	3	44	junction_1	21.4966774841403	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	NA	False	NA	40	True	AATAAA	-21	NA	7189588	7211483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00017809	chr12	+	3689	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	22.4844617549134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	NA	False	NA	16	True	AATAAA	-25	NA	7189588	7211459	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00017812	chr12	+	3314	15	FSM	ENSG00000139197.11	ENST00000266564.7	3170	15	-144	0	64	0	multi-exon	FALSE	canonical	2	9	junction_8	32.1962255361636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	7190204	False	NA	37	True	AATAAA	-18	NA	7190216	7211480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00017813	chr12	+	1917	3	ISM	ENSG00000187569.3	ENST00000345088.3	1100	4	-90	0	-90	0	intron_retention	FALSE	canonical	3	31	junction_1	2	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	NA	False	NA	NA	False	AATAAA	-27	NA	7711342	7717559	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_7711653_7715182_7715428_7716197
WTC11_00017814	chr12	+	1121	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	29	junction_3	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	7710714	True	NA	NA	False	AATAAA	-27	NA	7711411	7717559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
WTC11_00017815	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_3	122.158367157828	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7786224	True	NA	31	True	AATAAA	-19	NA	7789401	7799146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
WTC11_00017816	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	404.626576817028	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	7789567	False	NA	NA	False	NA	NA	NA	7789614	7795095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
WTC11_00017817	chr12	+	510	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTAAGCACCTGGGAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	7905595	7906105	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_7905600_7906100
WTC11_00017818	chr12	+	931	2	FSM	ENSG00000255964.1	ENST00000429127.2	1069	2	-6	144	-6	-144	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCAGGTGAAAGATAT	NA	False	NA	NA	False	AATAGA	-9	NA	8015017	8016262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8015663_8015976
WTC11_00017819	chr12	+	6108	11	FSM	ENSG00000065970.9	ENST00000162391.8	5524	11	-584	0	-584	0	multi-exon	FALSE	canonical	3	38	junction_6	9.80866963456309	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGGTAGTGGTCTCA	8032103	False	NA	37	True	AATAAA	-28	NA	8032131	8055517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8033834_8039818_8040166_8042657_8042733_8043700_8043770_8043950_8044092_8044759_8044959_8047881_8048290_8048696_8048799_8049361_8049572_8050521_8050621_8052761
WTC11_00017820	chr12	+	2676	9	FSM	ENSG00000065970.9	ENST00000428177.2	2676	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	10.917302780449	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGGCTGCCCAAAGTGT	8032422	False	NA	NA	False	NA	NA	NA	8033359	8050222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8033834_8039818_8040166_8042657_8042733_8043700_8043770_8043950_8044092_8044759_8044959_8047881_8048290_8048696_8048799_8049361
WTC11_00017821	chr12	+	4938	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	228	0	-105	0	multi-exon	FALSE	canonical	3	191	junction_3	27.938503896952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	NA	False	NA	-11	True	TATAAA	-20	NA	8082122	8097740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
WTC11_00017822	chr12	+	2597	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	-19	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	20.204509947589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	8080036	True	NA	-13	True	TATAAA	-18	NA	8082254	8097738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
WTC11_00017823	chr12	+	2614	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	-12	32	-4	-10	multi-exon	FALSE	canonical	3	191	junction_5	27.2598980338578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATATTTATATCACTC	8080043	True	NA	98	True	AATATA	-19	NA	8082261	8097849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
WTC11_00017825	chr12	+	3436	6	FSM	ENSG00000089818.18	ENST00000537796.2	3418	6	-18	0	-4	0	multi-exon	FALSE	canonical	3	222	junction_2	22.1323292944959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAAGTGTCTCTTTT	8080043	True	NA	8	True	ATTAAA	-4	NA	8082261	8097759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8093056_8095600_8095704_8096041
WTC11_00017827	chr12	+	392	3	FSM	ENSG00000226711.8	ENST00000420514.6	608	3	216	0	-10	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCAACAGACAGCAATT	NA	False	NA	NA	False	NA	NA	NA	8194419	8196518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8194482_8194728_8194797_8196256
WTC11_00017829	chr12	+	546	2	FSM	ENSG00000166532.16	ENST00000538758.1	570	2	0	24	0	-24	multi-exon	FALSE	canonical	3	24	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTACTAAGTATCTTC	8681162	True	NA	NA	False	NA	NA	NA	8681599	8714137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8681819_8713810
WTC11_00017830	chr12	+	1589	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	401.279516048352	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8681253	False	NA	35	True	AATAAA	-26	NA	8681690	8783095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
WTC11_00017831	chr12	+	555	3	FSM	ENSG00000166532.16	ENST00000541044.5	555	3	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_1	143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGGACATTTCAAGAG	8697161	False	NA	NA	False	AATGAA	-33	NA	8697176	8750029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8697333_8713810_8714042_8749861
WTC11_00017832	chr12	+	5830	7	FSM	ENSG00000166532.16	ENST00000357529.7	5830	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	140.670319857776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687010	True	NA	10	True	AATATA	-21	NA	8697921	8777191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8698298_8699784_8700615_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
WTC11_00017833	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	36.6464186517591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687079	True	NA	10	True	AATATA	-21	NA	8697990	8777191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
WTC11_00017834	chr12	+	3672	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	-1789	10	-348	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8777211	False	NA	25	True	AATAAA	-16	NA	8777241	8783085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8780740_8782911
WTC11_00017835	chr12	+	2862	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	-2222	10	0	0	multi-exon	FALSE	canonical	3	197	junction_1	591	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8777575	False	NA	25	True	AATAAA	-16	NA	8777589	8783085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8780113_8780574_8780740_8782911
WTC11_00017836	chr12	+	640	4	FSM	ENSG00000166532.16	ENST00000542232.6	640	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	585.921496448116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8777575	False	NA	35	True	AATAAA	-26	NA	8777589	8783095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8777803_8780034_8780113_8780574_8780740_8782911
WTC11_00017837	chr12	+	1536	3	FSM	ENSG00000249790.3	ENST00000540299.1	809	3	-727	0	-706	0	multi-exon	FALSE	canonical	3	81	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAACCCAAAATGAGT	8787536	False	NA	NA	False	NA	NA	NA	8787546	8794336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8788787_8789999_8790264_8794304
WTC11_00017839	chr12	+	1099	2	Genic_Genomic	ENSG00000249790.3	novel	1972	2	NA	NA	-718	303	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGTGACCAAGAACCCA	8787524	False	NA	NA	False	NA	NA	NA	8787534	8796092	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_8787973_8795431
WTC11_00017840	chr12	+	1084	2	Genic_Genomic	ENSG00000249790.3	novel	1972	2	NA	NA	-706	300	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGTGTGACCAAGAAC	8787536	False	NA	NA	False	NA	NA	NA	8787546	8796089	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_8787813_8795271
WTC11_00017842	chr12	+	1993	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	8788242	False	NA	NA	False	AATAAA	-16	NA	8788252	8795789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8788761_8794304
WTC11_00017843	chr12	+	498	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	390	junction_1	0	145	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGCTCTGCGTGAATTAC	8805065	True	NA	13	True	AATAAA	-19	NA	8805178	8821092	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_8805430_8820845
WTC11_00017844	chr12	+	5068	36	NNC	ENSG00000166535.20	novel	3370	25	NA	NA	393	-8	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	13.743302636082	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTGCATTTAGTTC	8822858	False	NA	9	True	AATAAA	-11	NA	8823013	8876779	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8823056_8823181_8823366_8823719_8823883_8829726_8829780_8834661_8834683_8835506_8835667_8836254_8836340_8837439_8837567_8838335_8838451_8839112_8839223_8841368_8841537_8843133_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8876057
WTC11_00017845	chr12	+	3370	25	FSM	ENSG00000166535.20	ENST00000541459.5	3370	25	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_24	12.2694714863989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAATGGATTGATTTT	NA	False	NA	7	True	ATTAAA	-21	NA	8843235	8875814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8875460
WTC11_00017846	chr12	+	618	6	FSM	ENSG00000111752.11	ENST00000538657.5	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	1325.67875444996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAACTCATCCTGATGC	8910925	False	NA	NA	False	NA	NA	NA	8913895	8922691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632
WTC11_00017847	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2546	junction_5	486.967820459695	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	8913946	False	NA	18	True	ATTAAA	-21	NA	8914508	8941467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
WTC11_00017853	chr12	+	579	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	13	0	13	0	multi-exon	FALSE	canonical	2	7	junction_3	11.0989864402116	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	8949297	True	NA	NA	False	NA	NA	NA	8950056	9009448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
WTC11_00017855	chr12	+	1566	3	FSM	ENSG00000139187.10	ENST00000538029.1	851	3	-18	-697	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCATTCTAGTTATTTC	8949347	True	NA	NA	False	AATAAA	-33	NA	8950106	9010760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8950237_9008974_9009076_9009425
WTC11_00017856	chr12	+	4062	27	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	6777	856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.078066597284	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTGATATGTGCTG	9281905	True	NA	NA	False	ATTAAA	-25	NA	9284011	9314097	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9284351_9288201_9288350_9293661_9293911_9294431_9294519_9294816_9294975_9297780_9297827_9298420_9298529_9298779_9298868_9299259_9299469_9301093_9301247_9302227_9302275_9302622_9302703_9303974_9304020_9304139_9304208_9305718_9305758_9306014_9306124_9306236_9306369_9307201_9307315_9309872_9310021_9310338_9310442_9311140_9311291_9311549_9311619_9311730_9311832_9312277_9312324_9312616_9312696_9312874_9313030_9313104
WTC11_00017857	chr12	+	542	3	NNC	ENSG00000284634.1	novel	999	6	NA	NA	58	-115695	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATCTGCAGTCACGGGT	9448333	False	NA	NA	False	NA	NA	NA	9448555	9479180	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9448879_9461323_9461435_9479072
WTC11_00017858	chr12	+	2278	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	334	0	214	0	multi-exon	FALSE	canonical	3	9	junction_1	9.39266853573691	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	9648367	False	NA	NA	False	GATAAA	-16	NA	9648380	9658412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
WTC11_00017860	chr12	+	3340	5	FSM	ENSG00000069493.15_ENSG00000213443.2	ENST00000430909.5	850	5	-84	-2406	-84	1308	multi-exon	FALSE	canonical	3	17	junction_1	4.7169905660283	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	19	True	NA	NA	NA	9680840	9697535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9681034_9687901_9688087_9692827_9692932_9693033_9693116_9694759
WTC11_00017861	chr12	+	844	1	FSM	ENSG00000213443.2	ENST00000396690.2	844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAATAGTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	9695383	9696227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9695400_9696200
WTC11_00017862	chr12	+	1959	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	-81	5	-40	0	multi-exon	FALSE	canonical	3	313	junction_1	10.3708994574027	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	10212777	False	NA	15	True	AATAAA	-16	NA	10212795	10223123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
WTC11_00017863	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	144.529120479807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	10213414	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
WTC11_00017864	chr12	+	704	3	FSM	ENSG00000245648.2	ENST00000666750.1	769	3	-1	66	0	-66	multi-exon	FALSE	canonical	2	3	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATATTTCCTTCTATAC	10363664	True	NA	99	True	CATAAA	-36	NA	10363706	10379976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10364034_10374034_10374137_10379701
WTC11_00017865	chr12	+	1447	1	FSM	ENSG00000180574.4	ENST00000538173.2	2636	1	-7	1196	-7	-1196	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAAATAATACATTCGGA	NA	False	NA	NA	False	NA	NA	NA	10505882	10507329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10505900_10507300
WTC11_00017866	chr12	+	4832	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	-11	2	-11	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATTTTATGGTATTTT	NA	False	NA	6	True	AATAAA	-18	NA	11171182	11176014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_11171200_11176000
WTC11_00017867	chr12	+	397	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATGGAGAGAGAATGGG	NA	False	NA	NA	False	AATAAA	-43	NA	11462297	11462694	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11462300_11462700
WTC11_00017868	chr12	+	349	1	FSM	ENSG00000278654.1	ENST00000614709.1	524	1	10	165	10	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGCTCACACAACCCAGT	NA	False	NA	NA	False	NA	NA	NA	11500508	11500857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_11500500_11500900
WTC11_00017869	chr12	+	6144	8	FSM	ENSG00000139083.11	ENST00000396373.9	6144	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	8.03563492024299	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTTTATAAAAAAAA	11649541	True	NA	NA	False	AAGAAA	-24	NA	11649673	11895377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_11650161_11752449_11752580_11839139_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940
WTC11_00017870	chr12	+	5644	7	NNC	ENSG00000139083.11	novel	6144	8	NA	NA	-46870	10009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	23.7305475893181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGTTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	11839066	11905386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940_11895391_11905355
WTC11_00017871	chr12	+	575	2	Genic_Genomic	ENSG00000198134.3	novel	327	1	NA	NA	-165	257	multi-exon	FALSE	non_canonical	0	0	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTTGTATTTTTTATT	NA	False	NA	NA	False	TTTAAA	-3	NA	12110997	12111746	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_12111228_12111401
WTC11_00017872	chr12	+	327	1	FSM	ENSG00000198134.3	ENST00000539347.1	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGACAGCAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	12111162	12111489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12111200_12111500
WTC11_00017873	chr12	+	237	1	FSM	ENSG00000283475.1	ENST00000636813.1	85	1	-14	-138	-14	138	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAACAAAAAAAACC	NA	False	NA	24	True	AATAAA	-34	NA	12111937	12112174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12111900_12112200
WTC11_00017874	chr12	+	387	1	FSM	ENSG00000270857.1	ENST00000604544.1	437	1	-190	240	-190	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATGTGGACCTA	NA	False	NA	NA	False	AATATA	-7	NA	12248800	12249187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12248800_12249200
WTC11_00017875	chr12	+	5026	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	1396	0	-1396	multi-exon	FALSE	canonical	3	89	junction_2	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAATTTAATCACGAGA	12355245	True	NA	NA	False	AATGAA	-28	NA	12357077	12469837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
WTC11_00017876	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	6.97614984548545	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	12609362	True	NA	7	True	ATTAAA	-18	NA	12611875	12645108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
WTC11_00017877	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	12715731	True	NA	13	True	AATAAA	-18	NA	12717367	12722369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12718315_12718824_12718955_12721035
WTC11_00017879	chr12	+	2403	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	-44	-2	-6	0	multi-exon	FALSE	canonical	3	645	junction_6	42.1160302022876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	NA	False	NA	17	True	AATAAA	-23	NA	12813309	12829981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
WTC11_00017881	chr12	+	1821	12	FSM	ENSG00000213782.7	ENST00000358007.7	1817	12	-4	0	-4	0	multi-exon	FALSE	canonical	3	645	junction_6	40.4593459868786	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	12809391	True	NA	17	True	AATAAA	-23	NA	12813341	12829981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
WTC11_00017883	chr12	+	967	1	FSM	ENSG00000234498.3	ENST00000459725.1	609	1	-38	-320	-38	320	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	12875460	12876427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12875500_12876400
WTC11_00017884	chr12	+	4416	1	FSM	ENSG00000183935.5	ENST00000624664.1	4411	1	25	-30	25	30	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGGTGAGGATTTG	13000164	True	NA	NA	False	AAAACA	-32	NA	13000444	13004860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_13000400_13004900
WTC11_00017885	chr12	+	4719	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	-8	0	-8	0	multi-exon	FALSE	canonical	3	56	junction_1	8.15603048874471	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	13043033	True	NA	NA	False	AATAAA	-18	NA	13044372	13083449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
WTC11_00017886	chr12	+	5150	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	-126	-137	-109	137	multi-exon	TRUE	canonical	3	122	junction_2	78.4457969272768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATCTCCTCAGATCATA	NA	False	NA	NA	False	NA	NA	NA	14365566	14482790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
WTC11_00017889	chr12	+	8847	15	FSM	ENSG00000171681.13	ENST00000261168.9	8823	15	-24	0	-18	0	multi-exon	FALSE	canonical	3	261	junction_13	54.9840422118926	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTACTCTGATTA	14356326	True	NA	16	True	AATAAA	-17	NA	14365657	14502930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
WTC11_00017890	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	81.5636723858191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	14356397	True	NA	17	True	AATAAA	-18	NA	14365728	14502931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
WTC11_00017893	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	14757675	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14774400_14775000
WTC11_00017894	chr12	+	1589	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	-3	0	1	0	multi-exon	FALSE	canonical	3	37	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	14803332	True	NA	NA	False	AAGAAA	-26	NA	14803666	14824415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14803752_14822911
WTC11_00017896	chr12	+	1904	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	-31	1	-31	-1	multi-exon	FALSE	canonical	3	2165	junction_5	124.763282031253	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGTTTGGTTTTTTTGG	15882336	True	NA	87	True	AATAAA	-17	NA	15882355	15903477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
WTC11_00017897	chr12	+	1710	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	-12	0	-8	0	multi-exon	FALSE	canonical	3	70	junction_1	774.393220124634	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	15855050	True	NA	52	True	NA	NA	NA	15882378	15903442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
WTC11_00017898	chr12	+	745	7	FSM	ENSG00000023697.13	ENST00000526521.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	96.0480203972066	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAGGAGGAGCTTGGA	15908567	True	NA	NA	False	NA	NA	NA	15911301	16036292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231
WTC11_00017899	chr12	+	1634	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	10	0	-10	multi-exon	FALSE	canonical	3	254	junction_4	17.9230124421092	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAGTGAGTCTCTGAAT	15908597	True	NA	NA	False	ATTAAA	-15	NA	15911331	16037371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
WTC11_00017900	chr12	+	858	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	-4	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	95.1415701328654	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	15908624	True	NA	NA	False	NA	NA	NA	15911358	16036751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
WTC11_00017901	chr12	+	315	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	-110	346	-101	0	multi-exon	FALSE	canonical	3	3342	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAATTTGGAGGTAAT	NA	False	NA	NA	False	AAGAAA	-2	NA	16347543	16354378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16354230
WTC11_00017902	chr12	+	279	2	FSM	ENSG00000008394.13	ENST00000534835.5	279	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCGCAACATGGCCACC	16277342	True	NA	NA	False	NA	NA	NA	16347644	16349106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16348893
WTC11_00017903	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	1578.61929827583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	16277342	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
WTC11_00017904	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	189.536862436367	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	16277342	True	NA	21	True	AATAAA	-16	NA	16347644	16364410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
WTC11_00017910	chr12	+	340	1	FSM	ENSG00000227525.4	ENST00000480903.1	738	1	374	24	374	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGCTTATTAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	19089524	19089864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19089500_19089900
WTC11_00017911	chr12	+	1951	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	149.217961385351	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGCCTTGGGTTCATT	19124398	True	NA	NA	False	AATAAA	-24	NA	19129751	19202000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
WTC11_00017912	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	35.5696499842211	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	19129646	False	NA	12	True	AATAAA	-17	NA	19129793	19376400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
WTC11_00017913	chr12	+	401	5	FSM	ENSG00000052126.15	ENST00000538034.5	453	5	52	0	52	0	multi-exon	FALSE	canonical	1	5	junction_1	125.675176546524	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAAAAAGTTCATAATT	19130664	False	NA	NA	False	NA	NA	NA	19130761	19257443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19130889_19132392_19132451_19253939_19254024_19255044_19255166_19257432
WTC11_00017915	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	15.9808558939138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	19431121	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
WTC11_00017916	chr12	+	5099	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	28.2353391160793	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	19439083	False	NA	NA	False	ATTAAA	-29	NA	19439673	19522239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
WTC11_00017918	chr12	+	2533	9	FSM	ENSG00000139154.16	ENST00000360995.8	2533	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	52.1008637164491	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGCTTCAAATTGTAAC	19440565	False	NA	8	True	AATAAA	-15	NA	19440580	19520223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19440728_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
WTC11_00017919	chr12	+	736	1	FSM	ENSG00000256849.1	ENST00000414406.2	1498	1	-4	766	-4	-766	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGTATTTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	19941516	19942252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19941500_19942300
WTC11_00017920	chr12	+	12397	16	FSM	ENSG00000172572.7	ENST00000359062.4	12486	16	45	44	45	-44	multi-exon	FALSE	canonical	2	3	junction_11	2.94089933334837	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAGTGAAGATAATGTA	20368429	False	NA	NA	False	ATTAAA	-29	NA	20368581	20688539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_20370245_20556659_20556711_20613442_20613701_20616229_20616385_20621295_20621412_20629907_20630128_20633692_20633779_20634901_20635057_20637099_20637238_20639845_20639958_20646489_20646604_20646750_20646951_20648687_20648892_20650444_20650601_20653946_20654206_20680029
WTC11_00017921	chr12	+	2965	1	FSM	ENSG00000256663.1	ENST00000540175.1	1423	1	-166	-1376	-166	1376	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTAGATTTATTTAATT	NA	False	NA	NA	False	AATAAA	-44	NA	20551423	20554388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_20551400_20554400
WTC11_00017922	chr12	+	4091	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	-17	1	-7	-1	multi-exon	TRUE	canonical	3	23	junction_4	3.82466981235684	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCGTTACTTTTTTT	21437166	True	NA	NA	False	AATAAA	-35	NA	21437637	21471249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
WTC11_00017923	chr12	+	625	2	FSM	ENSG00000121350.16	ENST00000538615.1	650	2	25	0	25	0	multi-exon	FALSE	canonical	3	32	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTATTGAGTTAATGAT	NA	False	NA	NA	False	AATAAA	-7	NA	21467314	21468826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21467619_21468505
WTC11_00017924	chr12	+	3505	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	-126	-2169	-78	0	multi-exon	FALSE	canonical	3	26	junction_2	221.069581806272	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	NA	False	NA	23	True	AATAAA	-37	NA	21501702	21518408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
WTC11_00017925	chr12	+	3259	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	-6	0	2	0	multi-exon	FALSE	canonical	3	324	junction_2	69.3289261419792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	21499035	True	NA	23	True	AATAAA	-37	NA	21501782	21518408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
WTC11_00017927	chr12	+	1756	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	73	-3	-25	3	multi-exon	FALSE	canonical	2	3	junction_2	2	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCACCTGTCATTAATT	21527451	True	NA	NA	False	ATTAAA	-20	NA	21527507	21532526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21527790_21529000_21529085_21531136
WTC11_00017928	chr12	+	1626	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	-51	0	-44	0	multi-exon	TRUE	canonical	3	68	junction_5	510.032596997486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	22032909	True	NA	26	True	AATAAA	-27	NA	22046173	22065674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
WTC11_00017929	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_3	116.186865673802	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	22032953	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
WTC11_00017930	chr12	+	1083	3	FSM	ENSG00000139163.16	ENST00000335148.8	1083	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	57.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGTTTGCAACCAT	22621006	True	NA	NA	False	AAAACA	-15	NA	22625140	22644587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22625587_22643762_22644023_22644210
WTC11_00017931	chr12	+	7084	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	-21	0	8	0	multi-exon	TRUE	canonical	3	80	junction_3	21.6823072798905	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	22621015	True	NA	NA	False	AATAAA	-37	NA	22625149	22690665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
WTC11_00017932	chr12	+	582	1	FSM	ENSG00000278969.1	ENST00000625186.1	2373	1	452	1339	452	-1339	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCCGGGAAGCGCCC	NA	False	NA	NA	False	ATTAAA	-12	NA	24902760	24903342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_24902800_24903300
WTC11_00017933	chr12	+	1243	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	93	junction_2	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	25194075	True	NA	NA	False	AATAAA	-22	NA	25195235	25205143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25195338_25203919_25204008_25204090
WTC11_00017934	chr12	+	330	1	FSM	ENSG00000255725.2	ENST00000543961.1	1229	1	-76	975	-76	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAGTCTGCAAAATCAA	NA	False	NA	NA	False	AAAACA	-40	NA	25803221	25803551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25803200_25803600
WTC11_00017935	chr12	+	5901	5	NIC	ENSG00000123094.16	novel	5510	5	NA	NA	-66	3	intron_retention	FALSE	canonical	3	24	junction_1	29.6352830254749	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCATTACAGTTGTCA	25957558	True	NA	NA	False	AATAAA	-14	NA	25958615	26072861	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_25959149_26055278_26055447_26064497_26065388_26067568_26067714_26068696
WTC11_00017938	chr12	+	5510	5	FSM	ENSG00000123094.16	ENST00000405154.6	5510	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	31.767711595266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTGTCAGTTTGTTT	25959043	False	NA	NA	False	AATAAA	-22	NA	25959057	26072869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_26055235_26055447_26064497_26065388_26067568_26067714_26068696
WTC11_00017940	chr12	+	3004	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	-72	0	-72	0	multi-exon	FALSE	canonical	3	81	junction_5	56.2240063397201	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	26933114	True	NA	13	True	ATTAAA	-20	NA	26938397	26966648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
WTC11_00017941	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	45.8659732263472	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	26933213	True	NA	109	True	NA	NA	NA	26938496	26960846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
WTC11_00017942	chr12	+	2793	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	-3	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	50.6620173305406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	26933213	True	NA	15	True	ATTAAA	-22	NA	26938496	26966650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
WTC11_00017943	chr12	+	2945	2	FSM	ENSG00000111790.14	ENST00000538172.1	2945	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAAATATAAATTTT	26960984	False	NA	NA	False	AGTAAA	-27	NA	26960995	26965080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26963456_26964595
WTC11_00017944	chr12	+	2685	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	-16	0	-4	0	multi-exon	FALSE	canonical	3	548	junction_3	31.8573208052543	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	27017983	True	NA	20	True	ATTAAA	-22	NA	27022541	27030673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
WTC11_00017945	chr12	+	2624	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	-774	11	-774	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAAATCCCAGCAC	27036307	False	NA	12	True	AATAAA	-15	NA	27036325	27038949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27036300_27038900
WTC11_00017946	chr12	+	755	7	FSM	ENSG00000211455.8	ENST00000545470.5	752	7	-3	0	-3	0	multi-exon	FALSE	canonical	1	43	junction_3	174.071824256541	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACTTCTGTAAGTTTG	27237881	True	NA	NA	False	AAGAAA	-45	NA	27244229	27315106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27309113_27309198_27312548_27312673_27314503_27314659_27315014
WTC11_00017949	chr12	+	5010	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	-53	0	0	0	multi-exon	FALSE	canonical	1	124	junction_7	88.1182637276	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	27237884	True	NA	15	True	AATAAA	-17	NA	27244232	27325959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
WTC11_00017954	chr12	+	3282	16	FSM	ENSG00000029153.15	ENST00000311001.9	1888	16	-135	-1259	0	1067	multi-exon	FALSE	canonical	2	6	junction_3	15.4367526809667	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTCATAGAGTTTTAAA	27330851	True	NA	NA	False	ATTAAA	-40	NA	27332919	27421792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27333104_27368261_27368413_27370128_27370231_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
WTC11_00017955	chr12	+	2830	15	FSM	ENSG00000029153.15	ENST00000261178.9	1843	15	-228	-759	-9	624	multi-exon	FALSE	canonical	3	37	junction_7	8.46390897292975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAATATGGTGAA	27330758	True	NA	NA	False	NA	NA	NA	27332826	27421349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
WTC11_00017956	chr12	+	281	4	FSM	ENSG00000029153.15	ENST00000539558.1	303	4	0	22	0	-22	multi-exon	FALSE	canonical	1	1	junction_2	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTCAGGAGTCTCTAT	NA	False	NA	NA	False	NA	NA	NA	27368316	27377481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27368413_27370128_27370231_27376345_27376388_27377440
WTC11_00017957	chr12	+	1732	1	ISM	ENSG00000029153.15	ENST00000544915.5	6785	16	90704	0	55222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTTAACTACTTTCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	27423557	27425289	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_27423600_27425300
WTC11_00017958	chr12	+	2821	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	-16	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	27521827	True	NA	NA	False	GATAAA	-20	NA	27524141	27637319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
WTC11_00017959	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	30.0854749417245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	27521827	True	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
WTC11_00017960	chr12	+	5981	28	NIC	ENSG00000110841.14	novel	5983	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_11	18.5377677733648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGCCCTTATTTCA	27521827	True	NA	8	True	AATAAA	-21	NA	27524141	27695564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664447_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
WTC11_00017963	chr12	+	5983	30	FSM	ENSG00000110841.14	ENST00000228425.11	5983	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_18	32.8720359744906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGCCCTTATTTCA	27521891	True	NA	8	True	AATAAA	-21	NA	27524205	27695564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815_27658849_27660883_27660946_27664361_27664447_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27677063_27677097_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
WTC11_00017966	chr12	+	669	1	FSM	ENSG00000174236.4	ENST00000310791.4	1150	1	361	120	361	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTAAAAACAGTTCAGG	27696792	False	NA	NA	False	AAAAAG	-20	NA	27696807	27697476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27696800_27697500
WTC11_00017967	chr12	+	557	5	FSM	ENSG00000061794.13	ENST00000536569.1	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	255.82257034906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAGGAGAGCGATACTG	27702310	True	NA	NA	False	ATTAAA	-1	NA	27710821	27735500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27710956_27716290_27716459_27719807_27719869_27724046_27724187_27735446
WTC11_00017968	chr12	+	1853	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	-24	0	-14	0	multi-exon	FALSE	canonical	3	569	junction_4	34.5903136140505	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	27702296	True	NA	NA	False	AATAAA	-17	NA	27710807	27756295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
WTC11_00017969	chr12	+	4141	9	Fusion	ENSG00000061794.13_ENSG00000087448.11	novel	1829	8	NA	NA	0	-4	multi-exon	FALSE	non_canonical	0	0	junction_8	210.290126967483	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTTTTGTTATCTAAG	27702335	True	NA	14	True	AATAAA	-11	NA	27710846	27803036	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180_27756295_27800708
WTC11_00017970	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	18	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	27780217	False	NA	18	True	AATAAA	-15	NA	27780232	27803040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707_27791902_27797714
WTC11_00017971	chr12	+	2022	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	-128	0	-128	0	multi-exon	FALSE	canonical	3	19	junction_3	39.8859485143439	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	27779903	True	NA	-2	True	AATAAA	-3	NA	27779919	27798156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
WTC11_00017972	chr12	+	3278	3	FSM	ENSG00000087448.11	ENST00000649445.1	3278	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCCAAAAAAAAAAAAAGA	27780256	False	NA	NA	False	NA	NA	NA	27780286	27800703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27780382_27791707_27791902_27797714
WTC11_00017973	chr12	+	2166	2	FSM	ENSG00000087448.11	ENST00000543254.1	772	2	-1236	-158	-417	158	multi-exon	FALSE	canonical	3	106	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGCCCCCATCCACCA	27779612	False	NA	NA	False	NA	NA	NA	27779630	27792301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707
WTC11_00017976	chr12	+	2548	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	1	-1	0	multi-exon	FALSE	canonical	3	44	junction_1	34.3713381888004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	28187464	True	NA	16	True	AATAAA	-17	NA	28190425	28550165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00017977	chr12	+	2758	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	-20	0	-1	0	multi-exon	FALSE	canonical	3	13	junction_3	54.0441794584147	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187464	True	NA	17	True	AATAAA	-18	NA	28190425	28550166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00017979	chr12	+	2276	10	NIC	ENSG00000123106.11	novel	2440	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	61.2664691892195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187506	True	NA	17	True	AATAAA	-18	NA	28190467	28550166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00017980	chr12	+	2802	17	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	63.189416390326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187506	True	NA	17	True	AATAAA	-18	NA	28190467	28550166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28304625_28304712_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00017982	chr12	+	3323	1	FSM	ENSG00000123106.11	ENST00000624946.1	2173	1	-1151	1	-1151	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATTTGTTTTCTTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	28578187	28581510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28578200_28581500
WTC11_00017983	chr12	+	3759	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	-221	0	7	0	multi-exon	FALSE	canonical	3	112	junction_6	19.4000937204859	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	29149027	False	NA	NA	False	AATAAA	-18	NA	29149056	29335616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
WTC11_00017984	chr12	+	539	3	ISM	ENSG00000064763.12	ENST00000690162.1	3524	11	21	38555	0	-851	5prime_fragment	FALSE	canonical	0	0	junction_1	92.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAAAGCTGGAAGCCTT	29149073	False	NA	NA	False	NA	NA	NA	29149102	29297078	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_29149408_29293299_29293476_29297020
WTC11_00017987	chr12	+	2935	1	FSM	ENSG00000257599.4	ENST00000641955.1	5529	1	2258	336	1910	-336	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCAGTCCCATGAAATT	NA	False	NA	NA	False	NA	NA	NA	29391546	29394481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29391500_29394500
WTC11_00017988	chr12	+	2156	4	FSM	ENSG00000285517.1	ENST00000650193.1	2391	4	235	0	22	0	multi-exon	FALSE	canonical	2	11	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATTCCCACTTTACC	30795676	False	NA	NA	False	TTTAAA	-27	NA	30795692	30803155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30796217_30799912_30800022_30800533_30800602_30801700
WTC11_00017989	chr12	+	1143	8	FSM	ENSG00000013573.17	ENST00000438391.6	1135	8	-8	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	146.414981947803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGTGAAGGACATGGAG	31067649	True	NA	NA	False	NA	NA	NA	31073859	31089999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885
WTC11_00017990	chr12	+	1561	12	FSM	ENSG00000013573.17	ENST00000542129.5	1561	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	122.323037976641	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGAGAGTTGCCCTCAG	31067649	True	NA	NA	False	AATACA	-19	NA	31073859	31094633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589
WTC11_00017991	chr12	+	4307	26	NIC	ENSG00000013573.17	novel	3920	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	177	junction_1	80.8993053122213	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067649	True	NA	15	True	AATAAA	-16	NA	31073859	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00017992	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	95.1996656053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	31067649	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00017997	chr12	+	3731	26	FSM	ENSG00000013573.17	ENST00000350437.8	3724	26	-7	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	122.398993459914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067680	False	NA	15	True	AATAAA	-16	NA	31073890	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00018007	chr12	+	1835	6	ISM	ENSG00000013573.17	ENST00000435753.6	4182	27	27821	0	184	0	3prime_fragment	FALSE	canonical	3	483	junction_1	30.7935058088552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31101672	False	NA	15	True	AATAAA	-16	NA	31101696	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
WTC11_00018009	chr12	+	1291	1	FSM	ENSG00000177340.5	ENST00000313737.5	1514	1	-176	399	-176	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAAAGACCCTCGGCCG	NA	False	NA	NA	False	NA	NA	NA	31324139	31325430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31324100_31325400
WTC11_00018010	chr12	+	1856	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	293	-61	293	61	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAAAAATGTAAAAGCCA	31729282	False	NA	74	True	NA	NA	NA	31729409	31731265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31729400_31731300
WTC11_00018011	chr12	+	674	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	47	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGGAGGACCGTTCCT	31950857	True	NA	NA	False	TTTAAA	-39	NA	31959369	31992834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31992377
WTC11_00018013	chr12	+	6273	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	-43	4	2	0	multi-exon	FALSE	canonical	3	98	junction_1	64.4409807498303	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	31950859	True	NA	2	True	AATAAA	-19	NA	31959371	31993103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
WTC11_00018014	chr12	+	6558	6	NIC	ENSG00000174718.12	novel	391	3	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	87.8689933935743	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	31950983	False	NA	2	True	AATAAA	-19	NA	31959495	31993103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31959901_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
WTC11_00018015	chr12	+	391	3	FSM	ENSG00000174718.12	ENST00000535606.1	391	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	60	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACTTGGACTATTGGA	31959626	False	NA	NA	False	NA	NA	NA	31959662	31970246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959901_31960776_31960872_31970188
WTC11_00018016	chr12	+	8271	2	FSM	ENSG00000174718.12	ENST00000543763.1	883	2	-7057	-331	-7057	327	multi-exon	FALSE	canonical	3	264	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAGCCTGGGCGACA	31980087	False	NA	NA	False	NA	NA	NA	31980108	31993434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31987323_31992377
WTC11_00018017	chr12	+	1733	1	FSM	ENSG00000276136.1	ENST00000616998.1	848	1	-1403	518	-1403	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCGTTGTTGTTTTTA	31998958	False	NA	11	True	AATAAA	-18	NA	31998971	32000704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31999000_32000700
WTC11_00018018	chr12	+	3967	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	-804	-1201	-804	1191	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATTTCTAGGATTT	32106014	False	NA	NA	False	AATAAA	-3	NA	32106030	32109997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32106000_32110000
WTC11_00018019	chr12	+	9124	9	FSM	ENSG00000151746.15	ENST00000548411.5	8811	9	-316	3	0	-3	multi-exon	FALSE	canonical	3	19	junction_7	20.9400185052449	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAATGCTGCCTTTTTA	32102313	True	NA	17	True	AATAAA	-21	NA	32106834	32383630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32367669_32367746_32377539
WTC11_00018020	chr12	+	1801	3	NNC	ENSG00000151746.15	novel	8811	9	NA	NA	4	-108989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACAGTCTCTGATGTTT	32102317	True	NA	NA	False	AGTAAA	-13	NA	32106838	32224076	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_32107545_32216246_32216460_32223194
WTC11_00018022	chr12	+	3159	6	NIC	ENSG00000151746.15	novel	8811	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	19.8433868076999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	32102363	True	NA	21	True	AATAAA	-22	NA	32106884	32333065	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32332453
WTC11_00018023	chr12	+	6228	7	ISM	ENSG00000151746.15	ENST00000395758.3	3194	10	-367	36896	0	1907	intron_retention	FALSE	canonical	3	39	junction_6	14.4913767461894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGAATCTTTCTGCTA	32102363	True	NA	NA	False	CATAAA	-20	NA	32106884	32341027	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498
WTC11_00018028	chr12	+	1321	1	FSM	ENSG00000276115.1	ENST00000614539.1	1796	1	508	-33	508	33	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATCAGGACAGCAAATG	NA	False	NA	40	True	AATAGA	-45	NA	32352856	32354177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32352900_32354200
WTC11_00018030	chr12	+	8544	17	FSM	ENSG00000139132.16	ENST00000534526.7	8465	17	-79	0	-79	0	multi-exon	FALSE	canonical	3	50	junction_6	8.85627425896466	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	32399406	False	NA	21	True	AATAAA	-17	NA	32399478	32646050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
WTC11_00018031	chr12	+	4412	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	27	0	27	0	multi-exon	FALSE	canonical	3	169	junction_14	61.2944975678793	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	32671505	True	NA	NA	False	AATAAA	-26	NA	32679226	32745552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
WTC11_00018032	chr12	+	571	6	FSM	ENSG00000087470.19	ENST00000551076.5	556	6	-15	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	179.303764600747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGACCAAGGTAAGGAA	32671579	True	NA	NA	False	NA	NA	NA	32679300	32711003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32709543_32709608_32710928
WTC11_00018034	chr12	+	2412	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	-19	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	97.485120738665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	32671579	True	NA	-46	True	TATAAA	-40	NA	32679300	32743581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
WTC11_00018036	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_15	68.5729488025652	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	32671579	True	NA	NA	False	NA	NA	NA	32679300	32745650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
WTC11_00018040	chr12	+	1614	3	FSM	ENSG00000139133.7	ENST00000541875.1	1637	3	23	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTAGTTTTTTTTA	34021417	True	NA	NA	False	AAAACA	-34	NA	34022495	34027029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_34022745_34023961_34024160_34025862
WTC11_00018041	chr12	+	3097	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	-14	-170	9	170	multi-exon	FALSE	canonical	3	12	junction_1	1.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCACATCCCCGGCCT	34021403	True	NA	NA	False	NA	NA	NA	34022481	34028472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_34022771_34023961_34024160_34025862
WTC11_00018042	chr12	+	5685	24	FSM	ENSG00000018236.15	ENST00000551295.7	5667	24	-20	2	-20	-2	multi-exon	TRUE	canonical	3	67	junction_1	10.8626064681394	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTGTCCTTTCAATTT	NA	False	NA	NA	False	AATAAA	-23	NA	40692418	41072413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_40692593_40908356_40908494_40910072_40910106_40918638_40918772_40922255_40922429_40924556_40924653_40929795_40930003_40933460_40933561_40933696_40933879_40936780_40936906_40937569_40937688_40939334_40939486_40943596_40943725_40943994_40944171_40959113_40959235_40980908_40981068_40993119_40993270_41014227_41014299_41016681_41016917_41020336_41020441_41025149_41025337_41027856_41027970_41029062_41029220_41069958
WTC11_00018043	chr12	+	1429	1	FSM	ENSG00000257674.1	ENST00000550858.1	1650	1	220	1	220	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATCCCACAGGCACAAGC	NA	False	NA	NA	False	NA	NA	NA	42287130	42288559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42287100_42288600
WTC11_00018044	chr12	+	1460	8	NIC	ENSG00000134283.18	novel	1693	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_2	96.2479790405375	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320924	True	NA	15	True	AATAAA	-15	NA	42326112	42441950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018047	chr12	+	1606	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	-23	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	51.7107338953916	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320956	True	NA	28	True	AATAAA	-28	NA	42326144	42441963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018049	chr12	+	1881	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	-22	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	123.890632772978	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320956	True	NA	NA	False	AATAAA	-34	NA	42326144	42442181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018050	chr12	+	1872	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	-9	0	-5	0	multi-exon	FALSE	canonical	3	87	junction_2	126.929649028386	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320951	True	NA	NA	False	AATAAA	-34	NA	42326139	42442181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018053	chr12	+	3474	12	NIC	ENSG00000134283.18	novel	2170	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	137.920146976969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	42320982	True	NA	18	True	AATAAA	-15	NA	42326170	42448618	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445990_42446291_42446591
WTC11_00018054	chr12	+	1499	9	ISM	ENSG00000134283.18	ENST00000317560.13	1359	10	-57	17765	-28	0	5prime_fragment	FALSE	canonical	3	87	junction_2	146.356585092711	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320928	True	NA	15	True	AATAAA	-15	NA	42326116	42441950	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018055	chr12	+	3358	12	NIC	ENSG00000134283.18	novel	3377	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	155.134226072693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGATTGTCTTTTCTCTT	42320989	True	NA	17	True	AATAAA	-14	NA	42326177	42448617	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445990_42446291_42446591
WTC11_00018056	chr12	+	3305	11	NIC	ENSG00000134283.18	novel	3377	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	150.738979696693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCTTTTCTCTTATTT	42320989	True	NA	21	True	AATAAA	-18	NA	42326177	42448621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445990_42446291_42446591
WTC11_00018057	chr12	+	1709	11	NIC	ENSG00000134283.18	novel	1863	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	167.274295694228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTGAGAGTAATT	42320990	True	NA	26	True	AATAAA	-26	NA	42326178	42441961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374637_42374734_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
WTC11_00018058	chr12	+	437	1	FSM	ENSG00000274943.1	ENST00000621405.1	437	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTACACAATTCAT	42361242	False	NA	17	True	AATAAA	-18	NA	42361266	42361703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42361300_42361700
WTC11_00018059	chr12	+	5975	1	FSM	ENSG00000134283.18	ENST00000624028.1	5975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTCTTATTTTA	42442626	True	NA	23	True	AATAAA	-20	NA	42442648	42448623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42442600_42448600
WTC11_00018060	chr12	+	563	4	FSM	ENSG00000198001.15	ENST00000550361.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	5.79271573232759	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGATGAACGACCCATT	43758561	False	NA	NA	False	NA	NA	NA	43759035	43772956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_43759201_43768102_43768273_43772179_43772363_43772911
WTC11_00018061	chr12	+	5998	20	FSM	ENSG00000177119.17	ENST00000320560.13	5998	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	79.0621621558919	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGTCTATTCTATAT	45210853	True	NA	18	True	AATAAA	-18	NA	45216094	45432349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
WTC11_00018062	chr12	+	5933	19	FSM	ENSG00000177119.17	ENST00000681817.1	5661	19	-240	-32	-3	0	multi-exon	FALSE	canonical	3	19	junction_17	92.8888224348513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTCTATTCTATATTG	45210840	True	NA	20	True	AATAAA	-20	NA	45216081	45432351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45216392_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
WTC11_00018063	chr12	+	8598	21	FSM	ENSG00000189079.17	ENST00000334344.11	8598	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_13	15.2230089010025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTGGATAAGTGAC	45727571	True	NA	16	True	AATAAA	-17	NA	45729705	45908037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497_45837708_45839328_45839497_45846855_45846938_45848835_45848971_45849579_45849777_45850035_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904933
WTC11_00018064	chr12	+	302	4	FSM	ENSG00000189079.17	ENST00000427628.5	323	4	0	21	0	-21	multi-exon	FALSE	canonical	1	1	junction_3	32.3144274623924	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCCTCCCAGGTTC	45727738	False	NA	NA	False	NA	NA	NA	45729872	45755984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45755930
WTC11_00018065	chr12	+	5481	20	FSM	ENSG00000189079.17	ENST00000422737.6	5481	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_13	15.2869143613916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTCTCTTAAGTTGTTT	45729878	False	NA	NA	False	AATAAA	-22	NA	45729915	45893918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497_45837708_45839328_45839497_45846855_45846938_45848835_45848971_45849579_45849777_45850035_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629
WTC11_00018066	chr12	+	4356	8	FSM	ENSG00000189079.17	ENST00000457135.1	4356	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	43.4041284597092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGATAAGTGACTTC	45852282	False	NA	19	True	AATAAA	-20	NA	45852294	45908040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904341_45904399_45904933
WTC11_00018067	chr12	+	356	1	FSM	ENSG00000265093.2	ENST00000584467.2	296	1	-58	-2	-58	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTGAG	NA	False	NA	NA	False	AATAGA	-19	NA	45873976	45874332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45874000_45874300
WTC11_00018069	chr12	+	376	3	FSM	ENSG00000257261.7	ENST00000666942.1	718	3	1	341	1	-341	multi-exon	FALSE	canonical	3	47	junction_1	4	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAATAAATTTCTGTT	46382044	True	NA	NA	False	NA	NA	NA	46383673	46470262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46383714_46387746_46387973_46470152
WTC11_00018070	chr12	+	568	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	-3	157374	combination_of_known_splicesites	FALSE	canonical	2	25	junction_3	12.684198393627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46382040	True	NA	7	True	AATAAA	-18	NA	46383669	46652577	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
WTC11_00018071	chr12	+	832	1	FSM	ENSG00000257261.7	ENST00000653856.1	871	1	-351	390	89	-390	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTTATTTTTCACATT	46382138	False	NA	NA	False	NA	NA	NA	46383767	46384599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46383800_46384600
WTC11_00018072	chr12	+	4128	1	FSM	ENSG00000275481.1	ENST00000621248.1	3271	1	-883	26	-883	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGATTCTTAAGAAAACT	46387944	False	NA	NA	False	AATATA	-5	NA	46387972	46392100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46388000_46392100
WTC11_00018073	chr12	+	1849	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	-26	-1091	-26	-3	multi-exon	FALSE	canonical	3	15	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTAGTTGTGGGTTTTGC	47223456	False	NA	12	True	AATAAA	-23	NA	47223474	47236657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47223673_47235006
WTC11_00018077	chr12	+	3053	3	FSM	ENSG00000211584.14	ENST00000442218.3	2978	3	-75	0	-52	0	multi-exon	FALSE	canonical	3	92	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCCATTTTCTTC	47771891	True	NA	3	True	AATAAA	-15	NA	47773162	47782751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47773441_47779027_47779196_47780144
WTC11_00018078	chr12	+	1167	1	FSM	ENSG00000268069.2	ENST00000599515.2	1080	1	-104	17	-104	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCACATGTATCAATCA	NA	False	NA	-11	True	AATAAA	-4	NA	47784818	47785985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47784800_47786000
WTC11_00018079	chr12	+	1744	1	FSM	ENSG00000278385.1	ENST00000622535.1	1744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTTATCATAGCCT	47905073	True	NA	NA	False	TTTAAA	-20	NA	47905121	47906865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47905100_47906900
WTC11_00018080	chr12	+	1530	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	-116	0	-50	0	multi-exon	FALSE	canonical	3	160	junction_1	118.573321843749	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	47963507	False	NA	-12	True	NA	NA	NA	47963518	47968849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
WTC11_00018081	chr12	+	1638	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	-128	29	-101	0	multi-exon	FALSE	canonical	3	160	junction_1	104.251657844206	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	NA	False	NA	-12	True	NA	NA	NA	47963467	47968849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
WTC11_00018082	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000256686.10	1394	8	-116	-29	-101	0	multi-exon	FALSE	canonical	3	213	junction_5	102.784696708951	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	NA	False	NA	17	True	AATAAA	-17	NA	47963467	47968878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
WTC11_00018083	chr12	+	1371	6	FSM	ENSG00000134291.12	ENST00000551305.5	1356	6	-15	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	93.0298876705761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCCTTGGAGACACATC	47957675	True	NA	NA	False	NA	NA	NA	47963568	47968171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47965281_47966230_47966682_47966733_47967207_47967262_47968132
WTC11_00018084	chr12	+	347	2	FSM	ENSG00000134291.12	ENST00000552187.1	590	2	-5	248	0	-248	multi-exon	FALSE	canonical	3	227	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATAGAGACAGTGCCCT	47957702	True	NA	NA	False	NA	NA	NA	47963595	47964517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208
WTC11_00018086	chr12	+	831	8	FSM	ENSG00000134291.12	ENST00000552561.5	810	8	-21	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	84.3425958184105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCTATTGGTTCTTCC	47957690	True	NA	NA	False	NA	NA	NA	47963583	47968229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
WTC11_00018089	chr12	+	3488	25	FSM	ENSG00000152556.17	ENST00000340802.12	3476	25	-12	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	161.053540959383	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48105671	True	NA	21	True	AATAAA	-15	NA	48105910	48146404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48106138_48107364_48107456_48108071_48108195_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
WTC11_00018091	chr12	+	3112	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	-49	0	30	0	multi-exon	FALSE	canonical	0	0	junction_1	113.937166914643	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114537	True	NA	19	True	AATAAA	-19	NA	48119293	48146104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
WTC11_00018092	chr12	+	2644	22	NIC	ENSG00000152556.17	novel	3090	23	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	146.144711310368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTACAGTGACAAATTGT	48114607	True	NA	-34	True	NA	NA	NA	48119363	48146051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
WTC11_00018093	chr12	+	3108	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	-18	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	112.734017393535	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48114589	True	NA	21	True	AATAAA	-15	NA	48119345	48146404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
WTC11_00018097	chr12	+	319	1	FSM	ENSG00000274124.1	ENST00000618623.1	312	1	57	-64	57	64	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAAGCGAAGCAAACATA	48152862	False	NA	NA	False	AAGAAA	-30	NA	48152873	48153192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48152900_48153200
WTC11_00018098	chr12	+	2313	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	-32	2	-32	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTGACTGGTACTAA	NA	False	NA	3	True	AATAAA	-17	NA	48183611	48185924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48183600_48185900
WTC11_00018099	chr12	+	1712	1	FSM	ENSG00000269514.3	ENST00000595310.1	3645	1	18	1915	18	-1915	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGATTTCCCGTACAG	48198274	False	NA	NA	False	AAGAAA	-36	NA	48198404	48200116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48198400_48200100
WTC11_00018100	chr12	+	704	5	FSM	ENSG00000167535.8	ENST00000549226.5	929	5	32	193	32	-193	multi-exon	FALSE	canonical	2	2	junction_1	12.1732288239399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAAGGAAGGGACCT	48814483	False	NA	NA	False	AAAAAG	-21	NA	48814511	48824968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48814554_48823343_48823467_48823680_48823804_48824257_48824374_48824668
WTC11_00018101	chr12	+	1753	13	FSM	ENSG00000167535.8	ENST00000540990.5	1814	13	61	0	32	0	multi-exon	FALSE	canonical	2	2	junction_1	10.0692049779955	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGATCCCCTTAGCAG	48814483	False	NA	NA	False	NA	NA	NA	48814511	48828200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48814554_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
WTC11_00018102	chr12	+	2938	13	FSM	ENSG00000167535.8	ENST00000301050.7	2931	13	-7	0	5	0	multi-exon	FALSE	canonical	3	22	junction_1	6.12372435695795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	48818345	True	NA	5	True	AATAAA	-15	NA	48818488	48828941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
WTC11_00018103	chr12	+	2569	1	NIC	ENSG00000139537.11	novel	2084	9	NA	NA	-3514	-3765	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACCTTGGTAGGCCAA	NA	False	NA	NA	False	NA	NA	NA	48914629	48917198	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48914600_48917200
WTC11_00018104	chr12	+	582	3	FSM	ENSG00000139537.11	ENST00000552188.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTTGAAACCGAAGAA	NA	False	NA	NA	False	NA	NA	NA	48918143	48920963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48918473_48918684_48918904_48920929
WTC11_00018105	chr12	+	1043	4	NNC	ENSG00000258017.3	novel	675	2	NA	NA	-80375	-2659	intron_retention	TRUE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGAAACCTGGGGCG	NA	False	NA	NA	False	NA	NA	NA	49047406	49185825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_49047432_49068429_49068456_49127781_49128666_49185717
WTC11_00018106	chr12	+	848	3	FSM	ENSG00000167553.17	ENST00000549183.1	696	3	-136	-16	-136	16	multi-exon	FALSE	canonical	3	734	junction_2	121	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCATCTTAGTCATACTG	NA	False	NA	NA	False	NA	NA	NA	49264944	49270212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49265185_49269464_49269688_49269827
WTC11_00018107	chr12	+	2824	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	-1	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	115.276479243021	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	49223100	True	NA	7	True	AATAAA	-16	NA	49265080	49274600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
WTC11_00018109	chr12	+	642	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	-19	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	145.222434752884	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	49317674	True	NA	51	True	AATAAA	-45	NA	49323235	49324416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
WTC11_00018110	chr12	+	704	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	-56	27	-37	0	multi-exon	FALSE	canonical	3	35	junction_3	173.155678188412	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATCACTTCTTCT	49317637	True	NA	0	True	AATAAA	-13	NA	49323198	49324365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
WTC11_00018111	chr12	+	799	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	-21	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	49317674	True	NA	15	True	AATAAA	-28	NA	49323235	49324380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844
WTC11_00018113	chr12	+	2779	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	-8	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	87.0149956470471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	49317674	True	NA	-48	True	NA	NA	NA	49323235	49331670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
WTC11_00018114	chr12	+	2570	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	-19	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	85.4582186969582	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	49317674	True	NA	13	True	AATAAA	-13	NA	49323235	49331731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
WTC11_00018115	chr12	+	616	4	NIC	ENSG00000135451.13	novel	675	4	NA	NA	1	7	combination_of_known_splicesites	FALSE	canonical	3	64	junction_3	159.63917647829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTTCTTCTGAAGCCT	49317675	True	NA	7	True	AATAAA	-20	NA	49323236	49324372	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49324211
WTC11_00018119	chr12	+	474	4	NIC	ENSG00000135451.13	novel	623	4	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	185.293161113829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGAAGCCTTTTCC	49317712	True	NA	12	True	AATAAA	-25	NA	49323273	49324377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49323947_49324230
WTC11_00018122	chr12	+	527	4	FSM	ENSG00000123352.18	ENST00000550643.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	83.814610235262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGACTAGTCACTATGG	49366756	True	NA	12	True	NA	NA	NA	49366904	49484668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367022_49371227_49371291_49460769_49461038_49484589
WTC11_00018123	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	69.9336420166595	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	49366756	True	NA	10	True	AAAAAG	-18	NA	49366904	49526365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
WTC11_00018124	chr12	+	639	4	FSM	ENSG00000123352.18	ENST00000549298.5	643	4	0	4	0	1	multi-exon	FALSE	canonical	1	2	junction_1	94.9959063445485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACTAGTCACTATGGA	49363543	True	NA	13	True	NA	NA	NA	49367383	49484669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367588_49441729_49441817_49460769_49461038_49484589
WTC11_00018125	chr12	+	3762	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	-604	0	15	0	multi-exon	FALSE	canonical	3	132	junction_1	27.7503753728366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	49366722	True	NA	11	True	AATAAA	-21	NA	49366870	49527419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
WTC11_00018126	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	44.7993554476034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	49363621	True	NA	17	True	AATAAA	-27	NA	49367461	49527425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
WTC11_00018129	chr12	+	318	1	FSM	ENSG00000257954.1	ENST00000551907.1	647	1	95	234	95	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACCAGATAAATGAAATAT	NA	False	NA	NA	False	AATGAA	-39	NA	49389610	49389928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49389600_49389900
WTC11_00018131	chr12	+	736	1	FSM	ENSG00000257243.1	ENST00000547655.1	541	1	-84	-111	-84	111	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAACCCGTCTCCACT	NA	False	NA	NA	False	NA	NA	NA	49595063	49595799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49595100_49595800
WTC11_00018132	chr12	+	602	4	FSM	ENSG00000110844.14	ENST00000551418.5	583	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	54	junction_2	29.2384830127845	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCGGCAGCACTCCCC	49623064	True	NA	NA	False	NA	NA	NA	49623394	49632037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859
WTC11_00018133	chr12	+	3348	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	-166	0	-19	0	multi-exon	TRUE	canonical	3	54	junction_2	31.9087699543558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	49623064	True	NA	13	True	TTTAAA	-20	NA	49623394	49644665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
WTC11_00018135	chr12	+	4359	25	FSM	ENSG00000110844.14	ENST00000380281.5	3154	25	-1205	0	-1205	0	multi-exon	FALSE	canonical	3	42	junction_20	33.9005643594452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCTTTTCCATGT	49629318	False	NA	14	True	TTTAAA	-21	NA	49629338	49644666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
WTC11_00018140	chr12	+	2865	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	-97	3	-67	0	multi-exon	TRUE	canonical	3	18	junction_1	1216.56955822509	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAACAC	NA	False	NA	61	True	ATTAAA	-11	NA	49741476	49764723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
WTC11_00018143	chr12	+	2844	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	-10	3	0	-3	multi-exon	FALSE	canonical	3	2671	junction_1	220.325012450042	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGTGTTTGTGTTAA	49706639	True	NA	16	True	AATAAA	-16	NA	49741546	49764931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
WTC11_00018147	chr12	+	1449	4	FSM	ENSG00000161798.7	ENST00000293599.7	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	0.942809041582063	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCACCTCTGTCTCTCCT	49961859	True	NA	14	True	AATAAA	-15	NA	49961871	49965682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49962381_49963491_49963657_49964091_49964176_49964991
WTC11_00018148	chr12	+	3922	12	FSM	ENSG00000110881.12	ENST00000447966.7	3886	12	-36	0	12	0	multi-exon	TRUE	canonical	3	10	junction_3	3.25500250726694	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTTCAGTGTTGTTC	50057533	False	NA	15	True	AATAAA	-15	NA	50057559	50083611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50057917_50058750_50059129_50059758_50059955_50077212_50077364_50077999_50078128_50078420_50078578_50078923_50078981_50079901_50080056_50080497_50080590_50081101_50081182_50081259_50081365_50081544
WTC11_00018149	chr12	+	3253	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	61	junction_10	114.054286045239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50085148	False	NA	13	True	AATAAA	-14	NA	50085183	50100642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
WTC11_00018151	chr12	+	914	7	FSM	ENSG00000066117.15	ENST00000550477.5	911	7	-3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	158.681721974804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCATTAATCATGTCA	50064639	True	NA	NA	False	NA	NA	NA	50085324	50090566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50089883_50089986_50090240_50090403_50090492
WTC11_00018152	chr12	+	3300	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	-17	0	0	0	multi-exon	FALSE	canonical	3	365	junction_4	41.9367082637634	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	50064639	True	NA	21	True	NA	NA	NA	50085324	50100707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
WTC11_00018153	chr12	+	2966	11	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_4	130.10549565641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064668	True	NA	13	True	AATAAA	-14	NA	50085353	50100642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
WTC11_00018154	chr12	+	3079	12	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	45	junction_4	118.111517552322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064672	True	NA	13	True	AATAAA	-14	NA	50085357	50100642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
WTC11_00018156	chr12	+	392	3	FSM	ENSG00000167588.13	ENST00000550172.1	794	3	402	0	402	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAGGGGCACAGAGGC	50105533	False	NA	NA	False	NA	NA	NA	50105547	50106916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50105689_50106287_50106427_50106804
WTC11_00018157	chr12	+	924	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	-247	0	-92	0	multi-exon	FALSE	canonical	3	89	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	50111971	False	NA	13	True	ATTAAA	-13	NA	50111989	50120451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50112498_50120035
WTC11_00018158	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	50107251	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50112302_50120035
WTC11_00018164	chr12	+	1600	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	-23	0	0	0	multi-exon	TRUE	canonical	3	168	junction_1	54.0281408156897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390413	True	NA	NA	False	AATAAA	-17	NA	50400884	50461487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
WTC11_00018166	chr12	+	6441	16	FSM	ENSG00000161813.23	ENST00000398473.7	6441	16	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	47.0558061124118	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGTTTCCTTTTCTCT	50390413	True	NA	12	True	AATAAA	-15	NA	50400884	50480004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
WTC11_00018167	chr12	+	1866	11	NNC	ENSG00000161813.23	novel	4000	16	NA	NA	0	1149	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	115.592776590927	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGTTGCTTGACTCT	50390417	True	NA	2	True	AATAAA	-10	NA	50400888	50456111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401029_50427761_50427910_50428916_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
WTC11_00018171	chr12	+	6474	17	NIC	ENSG00000161813.23	novel	6441	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	88.9739252534134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGTTTCCTTTTCTCT	50390429	True	NA	12	True	AATAAA	-15	NA	50400900	50480004	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
WTC11_00018173	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	77.2069839285731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	50390513	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
WTC11_00018174	chr12	+	2550	15	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	246	-27	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	94.7986050013611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGTAAATGATTTG	50400081	True	NA	-12	True	NA	NA	NA	50401438	50476429	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
WTC11_00018177	chr12	+	2608	8	FSM	ENSG00000066084.13	ENST00000549620.5	2676	8	11	57	11	-57	multi-exon	FALSE	canonical	3	65	junction_6	6.43015853424394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCCTGGGCGACAGAG	50498350	True	NA	NA	False	NA	NA	NA	50504995	50680225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678
WTC11_00018181	chr12	+	3519	2	FSM	ENSG00000185432.12	ENST00000332160.5	3117	2	-402	0	-370	0	multi-exon	FALSE	canonical	3	136	junction_1	0	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	50924448	True	NA	30	True	AATAAA	-26	NA	50924612	50932508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50925537_50929913
WTC11_00018185	chr12	+	2259	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	-208	55	157	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8714282798358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	NA	False	NA	-34	True	NA	NA	NA	51048118	51060369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
WTC11_00018190	chr12	+	2061	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	3	0	-1	multi-exon	FALSE	canonical	2	251	junction_1	71.0226880807973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACTTGATCATTTCATG	51234825	True	NA	8	True	AATAAA	-17	NA	51238825	51243930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
WTC11_00018197	chr12	+	6888	26	FSM	ENSG00000196876.18	ENST00000668547.1	6876	26	-12	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	7.1330218000508	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCACCAACAACAAAAAAC	51589682	True	NA	NA	False	NA	NA	NA	51591220	51808304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51591360_51662763_51663094_51684173_51684293_51686367_51686458_51687090_51687220_51689004_51689097_51699569_51699792_51701143_51701208_51702772_51702915_51705416_51705624_51706421_51706716_51721545_51721909_51745902_51746036_51751354_51751594_51762502_51762677_51765670_51766028_51768864_51769336_51769867_51769986_51770528_51770684_51774188_51774363_51786541_51786827_51788694_51788749_51789280_51789419_51790397_51790503_51794370_51794642_51806281
WTC11_00018198	chr12	+	11449	26	FSM	ENSG00000196876.18	ENST00000545061.5	11433	26	-16	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	6.64240920148706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGACTGGCCTGTCAT	51589681	True	NA	20	True	AATAAA	-30	NA	51591219	51812864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51591360_51662763_51663094_51684173_51684293_51686367_51686458_51687090_51687220_51688757_51688850_51699569_51699792_51701143_51701208_51702772_51702915_51705416_51705624_51706421_51706716_51721545_51721909_51745902_51746036_51751354_51751594_51762502_51762677_51765670_51766028_51768864_51769336_51769867_51769986_51770528_51770684_51774188_51774363_51786541_51786827_51788694_51788749_51789280_51789419_51790397_51790503_51794370_51794642_51806281
WTC11_00018201	chr12	+	2336	7	FSM	ENSG00000206992.1_ENSG00000135503.13	ENST00000415850.6	1665	7	0	-671	0	254	multi-exon	FALSE	canonical	3	18	junction_4	5.21749194749951	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGACAAGTCTTCCA	51949539	False	NA	NA	False	ATTAAA	-24	NA	51951743	51988017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817
WTC11_00018202	chr12	+	4531	9	FSM	ENSG00000135503.13	ENST00000257963.9	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.78656849955135	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTGGTGCCATCTGT	51949494	True	NA	6	True	ATTAAA	-16	NA	51951698	51997078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
WTC11_00018203	chr12	+	1942	8	FSM	ENSG00000161835.11	ENST00000293662.9	1952	8	10	0	10	0	multi-exon	FALSE	canonical	0	0	junction_5	6.88684045325369	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCAGTGTGGTGACT	52006619	True	NA	15	True	TATAAA	-17	NA	52006955	52015889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52007266_52009189_52009240_52010880_52010936_52011038_52011142_52013686_52013781_52013876_52013944_52014134_52014202_52014693
WTC11_00018204	chr12	+	1258	3	FSM	ENSG00000123358.20	ENST00000546842.5	1258	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	10.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGGTACCGCGCAGCC	52036485	True	NA	NA	False	NA	NA	NA	52037176	52055197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52037444_52041809_52041930_52054326
WTC11_00018206	chr12	+	2861	8	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-116	0	intron_retention	FALSE	canonical	3	61	junction_2	17.3816699134344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	52037044	False	NA	15	True	AATAAA	-21	NA	52037060	52059503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_52037444_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
WTC11_00018209	chr12	+	852	2	FSM	ENSG00000123395.15	ENST00000552544.5	837	2	-16	1	-16	-1	multi-exon	FALSE	canonical	3	410	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTGTCGGGGAGTTC	52069936	False	NA	NA	False	NA	NA	NA	52069959	52073902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52070484_52073574
WTC11_00018210	chr12	+	1451	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	-18	0	-16	0	multi-exon	FALSE	canonical	3	330	junction_1	58.1262992686328	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	52069936	False	NA	16	True	AATAAA	-25	NA	52069959	52077495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
WTC11_00018211	chr12	+	1267	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	-30	-391	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	181.846699783698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	52064990	True	NA	16	True	AATAAA	-25	NA	52069972	52077495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
WTC11_00018212	chr12	+	1422	5	NNC	ENSG00000123395.15	novel	1433	4	NA	NA	0	42966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	182.035710782253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	52065020	True	NA	NA	False	AATACA	-22	NA	52070002	52120461	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785_52077484_52120435
WTC11_00018227	chr12	+	3856	15	FSM	ENSG00000063046.18	ENST00000262056.14	3856	15	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	241.585082405384	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGTTCTTTGACAAA	52977002	True	NA	5	True	AATAAA	-25	NA	53006455	53042215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034710_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
WTC11_00018229	chr12	+	5038	15	NIC	ENSG00000063046.18	novel	590	6	NA	NA	937	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	405.267718267058	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGTTCTTTGACAAA	53007407	False	NA	5	True	AATAAA	-25	NA	53007420	53042215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53008644_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034710_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
WTC11_00018234	chr12	+	4853	29	FSM	ENSG00000111077.18	ENST00000314250.11	4848	29	-6	1	-6	-1	multi-exon	TRUE	canonical	2	4	junction_1	5.02798292010802	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAGTCAACACTTATTC	53049883	True	NA	19	True	AATAAA	-25	NA	53050058	53064378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53050261_53051854_53051964_53052454_53052493_53053410_53053450_53053773_53053813_53053964_53054015_53054269_53054442_53055185_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
WTC11_00018235	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.9691092959247	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097138	True	NA	10	True	AATAAA	-16	NA	53097666	53102340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
WTC11_00018236	chr12	+	364	1	FSM	ENSG00000258016.1	ENST00000550979.1	275	1	-40	-49	-40	49	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGACGTCTCATTATTG	NA	False	NA	NA	False	NA	NA	NA	53142012	53142376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53142000_53142400
WTC11_00018237	chr12	+	1358	1	FSM	ENSG00000257790.1	ENST00000550578.1	1213	1	2	-147	2	147	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACAAAACAAAACACTC	NA	False	NA	NA	False	AATAAA	-22	NA	53153273	53154631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53153300_53154600
WTC11_00018239	chr12	+	4873	7	FSM	ENSG00000139651.11	ENST00000416904.5	8557	7	0	3684	0	2702	multi-exon	FALSE	canonical	2	5	junction_6	2.5603819159562	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTACCAAGGTCTTACA	53178762	True	NA	NA	False	AATGAA	-35	NA	53180721	53191458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53180838_53181676_53181993_53184890_53185041_53185386_53185477_53185953_53186078_53186390_53186510_53187500
WTC11_00018241	chr12	+	1772	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	187	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	53249821	True	NA	21	True	AATAAA	-17	NA	53252085	53254406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53252269_53252817
WTC11_00018242	chr12	+	6641	31	FSM	ENSG00000135476.12	ENST00000257934.9	6618	31	-23	0	-23	0	multi-exon	FALSE	canonical	3	63	junction_1	39.1046459302898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	53266105	True	NA	8	True	AATAAA	-16	NA	53268275	53293638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53268378_53268754_53268848_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
WTC11_00018245	chr12	+	6665	31	FSM	ENSG00000135476.12	ENST00000552671.5	6665	31	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	45.6781007583381	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	53266162	True	NA	8	True	AATAAA	-16	NA	53268332	53293638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53268378_53268754_53268929_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
WTC11_00018249	chr12	+	4078	10	FSM	ENSG00000135476.12	ENST00000549154.1	4078	10	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	14.8323969741913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTTTTGCGTAGTT	NA	False	NA	5	True	AATAAA	-13	NA	53287255	53293635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53288342_53288537_53289304_53289403_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
WTC11_00018253	chr12	+	494	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	-33	17	0	0	multi-exon	FALSE	canonical	3	489	junction_1	1306.6769557418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCTGGGCAGAATGT	53295471	False	NA	12	True	AATAAA	-2	NA	53295491	53299433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
WTC11_00018258	chr12	+	2059	12	FSM	ENSG00000288663.1	ENST00000676940.1	2040	12	-19	0	-1	0	multi-exon	FALSE	canonical	3	417	junction_7	1339.31758866439	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	53274151	True	NA	0	True	AATAAA	-1	NA	53295505	53307158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
WTC11_00018259	chr12	+	1997	5	FSM	ENSG00000123349.15	ENST00000552341.5	1980	5	-17	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1369.06270400592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGGTCTTTTCTTG	53274170	True	NA	25	True	AATAAA	-15	NA	53295524	53299446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296429_53297925_53298044_53298151_53299268
WTC11_00018260	chr12	+	581	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	-17	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1358.27666548461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
WTC11_00018262	chr12	+	1392	6	FSM	ENSG00000139637.14	ENST00000548845.5	1369	6	-23	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	24.1545026858348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53294049	True	NA	13	True	AATAAA	-14	NA	53299694	53307171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
WTC11_00018263	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	22.2311093340441	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53294049	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
WTC11_00018269	chr12	+	8400	5	ISM	ENSG00000185591.10	ENST00000426431.2	7603	6	177	0	177	0	3prime_fragment	FALSE	canonical	3	101	junction_1	15.5080624192708	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGGTGTATTGA	53380124	True	NA	NA	False	AATAAA	-4	NA	53380815	53416446	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_53381814_53382109_53383623_53406584_53406754_53409361_53409562_53410926
WTC11_00018272	chr12	+	1107	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	295.398412694148	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433768	True	NA	27	True	AATAAA	-20	NA	53441731	53446638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
WTC11_00018277	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	224.250045351694	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	53452087	True	NA	44	True	ATTAAA	-44	NA	53452101	53479826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00018278	chr12	+	3026	13	FSM	ENSG00000197111.16	ENST00000437231.5	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	227.216291351557	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	53452087	True	NA	9	True	TATAAA	-14	NA	53452101	53481161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
WTC11_00018279	chr12	+	3159	15	FSM	ENSG00000197111.16	ENST00000546463.6	3159	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	217.922800410548	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAATACGAGTGGCTTT	53452087	True	NA	10	True	TATAAA	-15	NA	53452101	53481162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00018282	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	233.654954484389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53446962	True	NA	32	True	ATTAAA	-16	NA	53452367	53479614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
WTC11_00018283	chr12	+	1786	8	FSM	ENSG00000197111.16	ENST00000553064.6	1786	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	254.259549215653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATTATGCCTCTTTCT	53460616	True	NA	NA	False	AATAAA	-32	NA	53461014	53476070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53474868
WTC11_00018284	chr12	+	827	8	NIC	ENSG00000197111.16	novel	1342	15	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	323.988850904169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53460630	True	NA	32	True	ATTAAA	-16	NA	53461028	53479614	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53461144_53462492_53462568_53464759_53464853_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
WTC11_00018285	chr12	+	786	8	NIC	ENSG00000197111.16	novel	1342	15	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	279.187450744229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGATGCTGAGATCCA	53460630	True	NA	42	True	ATTAAA	-26	NA	53461028	53479624	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
WTC11_00018286	chr12	+	940	7	NIC	ENSG00000197111.16	novel	1730	14	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	327.301466541169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGCCACAGTGATTCA	53460630	True	NA	35	True	ATTAAA	-35	NA	53461028	53479817	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53461144_53462492_53462568_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00018287	chr12	+	890	7	NIC	ENSG00000197111.16	novel	2543	11	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	326.63282137593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGCCACAGTGATTCA	53462322	True	NA	35	True	ATTAAA	-35	NA	53462520	53479817	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53462568_53464759_53464853_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00018289	chr12	+	1855	9	FSM	ENSG00000139546.11	ENST00000550147.5	1855	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	130.652150288466	3506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53500883	True	NA	27	True	AATAAA	-24	NA	53500920	53506431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018290	chr12	+	1519	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	-9	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	50.9386886364382	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53501254	False	NA	27	True	AATAAA	-24	NA	53501273	53506431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018292	chr12	+	1493	9	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	134.951843262699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493885	False	NA	27	True	AATAAA	-24	NA	53501385	53506431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018293	chr12	+	1233	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	137.262447857514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493889	False	NA	27	True	AATAAA	-24	NA	53501389	53506431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018295	chr12	+	1480	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	-14	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	165.152959404305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	53501005	True	NA	-8	True	AATGAA	-22	NA	53501590	53506396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018296	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	112.281384810662	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	53501033	False	NA	8	True	AATAAA	-5	NA	53501618	53506412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00018297	chr12	+	1132	7	FSM	ENSG00000139546.11	ENST00000550407.1	1132	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	146.42138580898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	53501465	False	NA	-8	True	AATGAA	-22	NA	53502050	53506396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
WTC11_00018302	chr12	+	1811	10	FSM	ENSG00000135486.19	ENST00000677375.1	1811	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	4638.04587948922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCTCTTGAATGA	54280641	False	NA	-2	True	AATAAA	-2	NA	54280662	54285229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284239_54284318_54284548
WTC11_00018303	chr12	+	2014	10	FSM	ENSG00000135486.19	ENST00000678418.1	2008	10	-6	0	1	0	multi-exon	FALSE	canonical	3	1825	junction_6	5429.29731032945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTGAATGAAATGACAA	54280670	False	NA	6	True	AATAAA	-10	NA	54280691	54285237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
WTC11_00018304	chr12	+	2608	9	FSM	ENSG00000135486.19	ENST00000550482.2	2596	9	-12	0	1	0	multi-exon	FALSE	canonical	3	11777	junction_7	1566.82042186557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	54280670	False	NA	139	True	NA	NA	NA	54280691	54285842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257
WTC11_00018305	chr12	+	3999	6	FSM	ENSG00000135486.19	ENST00000677385.1	3999	6	0	0	0	0	multi-exon	FALSE	canonical	3	13019	junction_1	1531.25287265037	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTTGGGGAGG	54280641	False	NA	140	True	NA	NA	NA	54280662	54285843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572
WTC11_00018306	chr12	+	4121	10	FSM	ENSG00000135486.19	ENST00000546500.5	4121	10	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_7	1578.32136175991	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54280171	False	NA	39	True	AATAAA	-15	NA	54280192	54287087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
WTC11_00018307	chr12	+	2538	9	FSM	ENSG00000135486.19	ENST00000679228.1	2515	9	-23	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_6	1180.93373411678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54066798	True	NA	42	True	NA	NA	NA	54280725	54285745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
WTC11_00018308	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_7	5175.37763742898	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54066798	True	NA	39	True	AATAAA	-15	NA	54280725	54287087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
WTC11_00018309	chr12	+	1256	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	-22	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	5569.26139088479	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	54066798	True	NA	40	True	AATAAA	-16	NA	54280725	54287088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
WTC11_00018311	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	54285779	False	NA	3	True	NA	NA	NA	54285906	54287051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54286733_54286952
WTC11_00018314	chr12	+	1818	8	FSM	ENSG00000111481.10	ENST00000551779.5	1462	8	-64	-292	-22	0	multi-exon	FALSE	canonical	3	746	junction_1	229.07444650335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	54315336	True	NA	50	True	NA	NA	NA	54325086	54350913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619
WTC11_00018316	chr12	+	751	7	FSM	ENSG00000111481.10	ENST00000549116.5	736	7	-15	0	0	0	multi-exon	TRUE	canonical	2	17	junction_2	523.376033289854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTGTTTTCCTCCCT	54315378	True	NA	16	True	ATTAAA	-16	NA	54325128	54350879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54340546_54340616_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
WTC11_00018317	chr12	+	890	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	-10	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	422.387577120969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	54315378	True	NA	50	True	NA	NA	NA	54325128	54350913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
WTC11_00018318	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	466.429104339556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	54315378	True	NA	NA	False	NA	NA	NA	54325128	54351102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
WTC11_00018321	chr12	+	1388	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	-75	3	-75	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTAGACTGATGGCA	NA	False	NA	4	True	AATAAA	-15	NA	55681660	55684608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55682253_55683812
WTC11_00018324	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	567.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	55708393	True	NA	-25	True	NA	NA	NA	55716080	55719670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716197_55719090_55719224_55719498
WTC11_00018325	chr12	+	817	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	20	0	20	0	multi-exon	FALSE	canonical	3	313	junction_1	404.320280086083	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716200	False	NA	8	True	AATAAA	-16	NA	55716311	55719703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
WTC11_00018327	chr12	+	543	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	-18	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	537.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55714109	True	NA	8	True	AATAAA	-16	NA	55716512	55719703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716718_55719090_55719224_55719498
WTC11_00018328	chr12	+	8788	3	FSM	ENSG00000135414.10	ENST00000257868.10	8801	3	13	0	13	0	multi-exon	FALSE	canonical	3	19	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCTTTTCTATTT	55743074	False	NA	8	True	AATAAA	-24	NA	55743134	55757264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55743762_55748585_55748984_55749501
WTC11_00018329	chr12	+	1258	4	FSM	ENSG00000135414.10	ENST00000546799.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	8.37987005998436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCCTTTTCCTTG	55742818	False	NA	2	True	AATAAA	-15	NA	55743398	55757127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55743762_55748585_55748984_55749501_55749884_55757012
WTC11_00018330	chr12	+	2033	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	314	junction_1	46.5403051128804	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	55813058	True	NA	NA	False	AATAAA	-15	NA	55818026	55821879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
WTC11_00018331	chr12	+	585	2	FSM	ENSG00000182796.15	ENST00000636790.1	572	2	-13	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACTGTGCCACAAGGTG	55829925	True	NA	NA	False	NA	NA	NA	55830827	55833021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831350_55832958
WTC11_00018333	chr12	+	1720	5	FSM	ENSG00000182796.15	ENST00000636428.1	884	5	174	-1010	79	0	multi-exon	FALSE	canonical	3	25	junction_3	14.0890028036054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	55830099	False	NA	10	True	AATAAA	-17	NA	55831001	55836244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55831256_55831350_55832958_55833015_55833446_55833542_55834850
WTC11_00018336	chr12	+	2735	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	-8	0	-8	0	multi-exon	FALSE	canonical	3	24	junction_1	10.796449742028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	55930880	True	NA	26	True	AATAAA	-33	NA	55931153	55954023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
WTC11_00018338	chr12	+	552	6	FSM	ENSG00000065357.20	ENST00000547535.5	565	6	13	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	16.3780340700586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGTTGGGGACCCTGT	55931793	True	NA	NA	False	NA	NA	NA	55932063	55938558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55932124_55936422_55936568_55937016_55937091_55937407_55937558_55937977_55938053_55938510
WTC11_00018345	chr12	+	2270	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	-30	0	0	0	multi-exon	FALSE	canonical	3	342	junction_3	29.2498812913071	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	55959745	True	NA	23	True	ATTAAA	-26	NA	55966799	55972789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
WTC11_00018349	chr12	+	1261	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	-1	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	138.260623461635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	55959775	True	NA	NA	False	TATAAA	-16	NA	55966829	55971912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
WTC11_00018356	chr12	+	2412	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	-18	0	-6	0	multi-exon	FALSE	canonical	3	33	junction_3	55.7544617048717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	55995569	True	NA	-20	True	NA	NA	NA	55997269	56005486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
WTC11_00018364	chr12	+	5313	8	FSM	ENSG00000123411.15	ENST00000547167.6	5313	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	10.4666623337224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	56020953	True	NA	8	True	AATAAA	-19	NA	56021042	56038435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56021581_56023670_56023765_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
WTC11_00018366	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	925	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	55782154	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56042170_56042424_56043494_56044118
WTC11_00018367	chr12	+	569	4	FSM	ENSG00000065361.17	ENST00000549282.5	561	4	-8	0	-8	0	multi-exon	FALSE	canonical	2	7	junction_1	49.815214097257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCACGCTCTGCGCCAG	NA	False	NA	NA	False	NA	NA	NA	56079848	56085139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56079935_56080196_56080383_56083750_56083903_56084994
WTC11_00018368	chr12	+	1315	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	-288	0	-8	0	multi-exon	FALSE	canonical	3	109	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	NA	False	NA	10	True	AATAAA	-23	NA	56079848	56085623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56080383_56083750_56083903_56084994
WTC11_00018369	chr12	+	5886	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	-290	19	1	0	multi-exon	FALSE	canonical	3	82	junction_7	23.9102115577268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAAAGTTTTTTTTCAG	56078859	True	NA	-4	True	AATAAA	-2	NA	56079874	56103486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
WTC11_00018374	chr12	+	5511	25	FSM	ENSG00000065361.17	ENST00000683653.1	5511	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	33.5016324229134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	56079273	False	NA	NA	False	NA	NA	NA	56080346	56102804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56094098_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
WTC11_00018376	chr12	+	3289	6	FSM	ENSG00000065361.17	ENST00000549832.1	3289	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	23.3460917500125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGCTTCCTGTCTGTC	NA	False	NA	9	True	AATAAA	-15	NA	56098250	56103499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
WTC11_00018378	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1583	junction_4	102.848965586545	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	56073534	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
WTC11_00018380	chr12	+	677	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	-1	0	0	0	multi-exon	FALSE	canonical	3	13136	junction_1	5109.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	56088206	True	NA	31	True	TATAAA	-34	NA	56116631	56117967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116800_56117188_56117212_56117481
WTC11_00018381	chr12	+	493	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	5168	junction_1	7443.74423406811	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56116484	False	NA	7	True	AATAAA	-38	NA	56116565	56117832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
WTC11_00018382	chr12	+	552	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	-1	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	9900.04488205315	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	56088206	True	NA	1	True	AATAAA	-32	NA	56116631	56117826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
WTC11_00018384	chr12	+	2957	2	FSM	ENSG00000135482.7	ENST00000551880.1	1019	2	-148	-1790	-87	1660	multi-exon	FALSE	canonical	3	84	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACAAATGGAGGCAGTG	56118124	False	NA	-1	True	AATAAA	-13	NA	56118172	56122488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56119152_56120510
WTC11_00018386	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_18	51.1742665365665	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	56120091	True	NA	19	True	ATTAAA	-17	NA	56128266	56144674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
WTC11_00018391	chr12	+	1413	7	FSM	ENSG00000196465.10	ENST00000553066.5	1305	7	0	-108	0	108	multi-exon	FALSE	canonical	3	344	junction_1	119.025790855969	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTGTTGGGAGGTGC	NA	False	NA	NA	False	NA	NA	NA	56152255	56158090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697
WTC11_00018392	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	220.967630836625	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
WTC11_00018393	chr12	+	830	8	NNC	ENSG00000196465.10	novel	1034	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	219.602051958741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56145640	True	NA	18	True	AATAAA	-14	NA	56152599	56157976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_56152632_56153851_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
WTC11_00018394	chr12	+	818	8	NIC	ENSG00000196465.10	novel	1034	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	344	junction_1	110.253881416243	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTCAGACTGCTA	56145630	True	NA	17	True	AATAAA	-13	NA	56152589	56157975	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
WTC11_00018395	chr12	+	887	2	FSM	ENSG00000196465.10	ENST00000548548.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTCAGACTGCTA	56156912	False	NA	17	True	AATAAA	-13	NA	56156936	56157975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56157546_56157697
WTC11_00018399	chr12	+	1433	6	FSM	ENSG00000092841.19	ENST00000548293.5	753	6	-160	-520	-110	0	multi-exon	FALSE	canonical	3	115	junction_5	4249.75610594302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTAAAGTTTCCC	56158212	False	NA	-83	True	NA	NA	NA	56158235	56161465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625
WTC11_00018402	chr12	+	697	4	FSM	ENSG00000092841.19	ENST00000549566.5	685	4	-12	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	5026.43014474488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTAAAGTTTCCC	56099285	True	NA	-83	True	NA	NA	NA	56158345	56161465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158712_56159974_56160149_56160242_56160321_56161386
WTC11_00018403	chr12	+	1567	6	FSM	ENSG00000092841.19	ENST00000550184.5	1564	6	-3	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	5189.70176407084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	56099285	True	NA	2	True	NA	NA	NA	56158345	56161550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
WTC11_00018404	chr12	+	674	6	FSM	ENSG00000092841.19	ENST00000293422.9	664	6	-10	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4412.39991841175	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099285	True	NA	26	True	AATAAA	-14	NA	56158345	56161574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158680_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
WTC11_00018405	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_2	4410.98024819881	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099285	True	NA	27	True	AATAAA	-15	NA	56158345	56161575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
WTC11_00018406	chr12	+	721	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	-13	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	4951.44192522632	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	56099285	True	NA	31	True	AATAAA	-19	NA	56158345	56161579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
WTC11_00018407	chr12	+	732	7	FSM	ENSG00000092841.19	ENST00000348108.8	722	7	-10	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5426.01762089124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTCCTGAACAGGG	56099285	True	NA	39	True	AATAAA	-27	NA	56158345	56161587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158680_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
WTC11_00018409	chr12	+	671	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	-16	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	742.875601968459	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099285	True	NA	26	True	AATAAA	-14	NA	56158345	56161574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
WTC11_00018410	chr12	+	593	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	-20	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	5218.45728853099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099301	True	NA	27	True	AATAAA	-15	NA	56158361	56161575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
WTC11_00018412	chr12	+	1046	4	FSM	ENSG00000139579.13	ENST00000479016.2	1031	4	-15	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCTGTTCCCTTCTAT	56220158	True	NA	NA	False	NA	NA	NA	56224341	56226419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178
WTC11_00018413	chr12	+	1792	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	-17	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	14.661514246489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220158	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
WTC11_00018415	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	88.3014093256098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	56220217	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
WTC11_00018416	chr12	+	1376	6	NIC	ENSG00000135469.14	novel	1570	5	NA	NA	-12	-124	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	40.9223655230242	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACCAGTGCTGAGGAGA	56265642	True	NA	NA	False	GGGGCT	-5	NA	56266877	56270840	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149_56270319_56270450
WTC11_00018417	chr12	+	1570	5	FSM	ENSG00000135469.14	ENST00000308197.10	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	23.3345237791561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56265706	True	NA	NA	False	AATAAA	-16	NA	56266941	56270966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149
WTC11_00018418	chr12	+	1821	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	-413	2	-20	0	multi-exon	FALSE	canonical	3	40	junction_1	30.8139578762612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	56265634	True	NA	NA	False	AATAAA	-14	NA	56266869	56270964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
WTC11_00018420	chr12	+	2052	3	FSM	ENSG00000135469.14	ENST00000549545.1	1546	3	0	-506	0	0	multi-exon	FALSE	canonical	3	93	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	56267823	False	NA	NA	False	AATAAA	-14	NA	56268116	56270964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56269252_56269459_56269562_56270149
WTC11_00018424	chr12	+	312	1	FSM	ENSG00000257576.1	ENST00000547203.1	1702	1	1613	-223	1613	223	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTATTTTTGAATAAA	56512545	False	NA	NA	False	AATATA	-43	NA	56512614	56512926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56512600_56512900
WTC11_00018426	chr12	+	3245	9	ISM	ENSG00000076067.13	ENST00000542360.1	1484	13	59183	-2099	9484	2042	3prime_fragment	FALSE	canonical	3	12	junction_8	6.13264828601804	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATAGAAACCATTGTTGA	NA	False	NA	-97	True	NA	NA	NA	56581181	56591694	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
WTC11_00018429	chr12	+	2318	6	FSM	ENSG00000166886.13	ENST00000342556.6	2318	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	11.8659175793531	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATGACCCCTGCCTTGA	57088837	True	NA	19	True	AATAAA	-20	NA	57089093	57095475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57094611
WTC11_00018434	chr12	+	5114	17	FSM	ENSG00000123384.14	ENST00000556356.1	5114	17	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	60.9738673531538	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	57203603	False	NA	84	True	AATAAA	-6	NA	57203617	57213340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57204530_57204626_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
WTC11_00018436	chr12	+	976	8	FSM	ENSG00000182199.11	ENST00000555634.5	964	8	-12	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	419.937993479212	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCGGGTGCTAGAGCTT	57205518	True	NA	NA	False	NA	NA	NA	57229710	57233811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748
WTC11_00018437	chr12	+	3416	6	FSM	ENSG00000182199.11	ENST00000554467.5	3416	6	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	71.1690944160455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205518	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231914_57232210_57232576_57232703_57233663_57233748_57233905_57234002
WTC11_00018438	chr12	+	2157	12	FSM	ENSG00000182199.11	ENST00000328923.8	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	58.8085561886341	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	57205518	True	NA	28	True	AATGAA	-16	NA	57229710	57234935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
WTC11_00018443	chr12	+	4001	12	FSM	ENSG00000111087.10	ENST00000228682.7	3972	12	-37	8	-37	0	multi-exon	FALSE	canonical	3	23	junction_11	5.50131464378446	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAATACCATGCCACT	57459725	False	NA	5	True	AATAAA	-12	NA	57459747	57472260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57460202_57463664_57463792_57463998_57464092_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
WTC11_00018453	chr12	+	2989	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	-10	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	328.336886613599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	57468922	True	NA	15	True	AATAAA	-25	NA	57488055	57516655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
WTC11_00018454	chr12	+	2775	21	NNC	ENSG00000166986.15	novel	2797	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	47	junction_6	310.835145213665	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAGCTGAGACCTTTC	57468949	True	NA	8	True	AATAAA	-18	NA	57488082	57516648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490540_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
WTC11_00018465	chr12	+	1552	8	NNC	ENSG00000166987.15	novel	1884	9	NA	NA	-417	1390	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	29.4978380390766	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGACTTGCTGTGTGCC	57527044	False	NA	NA	False	AATAAA	-14	NA	57527084	57531538	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57527228_57527506_57527661_57527847_57528018_57528146_57528561_57528665_57528719_57528945_57529010_57529159_57529330_57531154
WTC11_00018466	chr12	+	1664	5	NIC	ENSG00000166987.15	novel	1884	9	NA	NA	-40	0	intron_retention	FALSE	canonical	2	3	junction_1	35.8425375775767	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTCTGGCTCTGTAC	57527831	False	NA	6	True	NA	NA	NA	57527871	57530143	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57528018_57528143_57528561_57528665_57528719_57528945_57529010_57529159
WTC11_00018471	chr12	+	3194	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	-18	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	18.2452429112053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587748	True	NA	10	True	AATAAA	-15	NA	57591173	57603418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
WTC11_00018475	chr12	+	2068	6	FSM	ENSG00000178498.16	ENST00000548804.5	2067	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	35	junction_1	38.4634891813002	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604558	True	NA	17	True	AATAAA	-23	NA	57604620	57609800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
WTC11_00018476	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.0828891232752	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	57603058	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
WTC11_00018477	chr12	+	3199	5	FSM	ENSG00000178498.16	ENST00000548198.5	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	14.2192651005599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTTCTTTTC	57603058	True	NA	20	True	AATAAA	-26	NA	57604823	57609803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
WTC11_00018478	chr12	+	1850	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	-10	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	52.3121400823939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	57603058	True	NA	21	True	AATAAA	-27	NA	57604823	57609804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
WTC11_00018483	chr12	+	2086	14	FSM	ENSG00000135506.16	ENST00000552285.5	2135	14	49	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_11	164.320440300626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAAACAGCAGAGTGGA	57693992	False	NA	NA	False	NA	NA	NA	57694003	57720998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
WTC11_00018484	chr12	+	2472	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	-15	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	110.777563789123	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687143	True	NA	19	True	AATAAA	-16	NA	57694131	57721557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
WTC11_00018487	chr12	+	2711	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	-141	-479	-19	0	multi-exon	FALSE	canonical	3	243	junction_11	126.500060498493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACCATGTTCTTGAAC	57693992	False	NA	-35	True	AAAAAG	-9	NA	57694003	57721503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
WTC11_00018488	chr12	+	2259	13	FSM	ENSG00000135506.16	ENST00000551035.5	2246	13	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	229.55167658334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTACAATTTGTGCTTCTG	57687143	True	NA	NA	False	NA	NA	NA	57694131	57721395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
WTC11_00018489	chr12	+	2702	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	-20	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_11	170.349296015749	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687123	True	NA	19	True	AATAAA	-16	NA	57694111	57721557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
WTC11_00018490	chr12	+	2518	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	186.994098568399	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	57687143	True	NA	17	True	AATAAA	-14	NA	57694131	57721555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
WTC11_00018493	chr12	+	3586	10	FSM	ENSG00000135506.16	ENST00000549307.5	3870	10	284	0	284	0	multi-exon	FALSE	canonical	0	0	junction_7	191.16878974571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57688791	False	NA	19	True	AATAAA	-16	NA	57695779	57721557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57695844_57695961_57696374_57715759_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57720264_57720405_57720519_57720783
WTC11_00018506	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	27.2132320755915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	57777743	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
WTC11_00018511	chr12	+	876	6	NNC	ENSG00000166896.9	novel	3134	6	NA	NA	-92	196	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	26.4272586546543	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTCATTTGTTTTTAT	NA	False	NA	9	True	AATAAA	-18	NA	57941703	57957136	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57941780_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
WTC11_00018512	chr12	+	6691	1	FSM	ENSG00000286279.2	ENST00000690943.1	931	1	-844	-4916	-844	4916	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	59321918	59328609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_59321900_59328600
WTC11_00018514	chr12	+	11795	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	-19	160	-19	-160	multi-exon	FALSE	canonical	2	3	junction_5	1.93907194296653	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGTATTTTAGTTAT	59595807	True	NA	NA	False	NA	NA	NA	59596009	59789681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
WTC11_00018515	chr12	+	2264	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	-38	0	3	0	multi-exon	FALSE	canonical	3	17	junction_6	58.6138493304555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	62256210	True	NA	NA	False	AATAAA	-15	NA	62260358	62336690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
WTC11_00018516	chr12	+	3270	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	-45	11746	3	0	multi-exon	FALSE	canonical	3	69	junction_7	32.2262410504995	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATTAATTAT	62256210	True	NA	23	True	AATAAA	-16	NA	62260358	62404643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
WTC11_00018517	chr12	+	14730	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	21	199	3	-199	multi-exon	FALSE	canonical	3	47	junction_6	30.9845122601599	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCAAGACTTGCTCCAA	62256210	True	NA	NA	False	NA	NA	NA	62260358	62416190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
WTC11_00018518	chr12	+	925	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	-49	-297	3	297	multi-exon	FALSE	canonical	2	3	junction_3	84.1704619606348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCTTTAAAGAAATGCT	62256210	True	NA	NA	False	NA	NA	NA	62260358	62305193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
WTC11_00018520	chr12	+	5556	26	ISM	ENSG00000061987.16	ENST00000393629.6	5612	34	-38	30626	-7	8874	5prime_fragment	TRUE	canonical	3	51	junction_7	13.1353568661076	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACTCTGATTCAGATCT	62463106	True	NA	NA	False	AAGAAA	-34	NA	62466809	62562239	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490
WTC11_00018521	chr12	+	13279	35	FSM	ENSG00000061987.16	ENST00000393630.8	13263	35	-16	0	-7	0	multi-exon	TRUE	canonical	3	51	junction_7	29.5574626552402	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTTTAGACCCTGTTT	62463106	True	NA	NA	False	ATTAAA	-18	NA	62466809	62600476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
WTC11_00018524	chr12	+	5616	34	FSM	ENSG00000061987.16	ENST00000393629.6	5612	34	-4	0	0	0	multi-exon	FALSE	canonical	3	49	junction_27	30.5117358384461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTAAATTCTACTTAC	62463140	True	NA	NA	False	NA	NA	NA	62466843	62592865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
WTC11_00018528	chr12	+	1025	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	-223	-311	-223	311	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCTGCGTGGAAAACA	62603527	False	NA	NA	False	AAAAAG	-44	NA	62603685	62604710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62603700_62604700
WTC11_00018532	chr12	+	1644	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	-260	582	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4014084157811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTGAAAGAAGAAAA	63778330	True	NA	NA	False	AAAAAG	-22	NA	63779865	63808976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
WTC11_00018533	chr12	+	1853	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	1	0	-1	multi-exon	FALSE	canonical	3	95	junction_3	8.26075057122535	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGAGGTTTAATTGGC	63778373	True	NA	89	True	AATAAA	-25	NA	63779908	63809561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
WTC11_00018538	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	1	334	junction_6	176.34010206763	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	64391505	True	NA	15	True	AATAAA	-20	NA	64404391	64451125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
WTC11_00018546	chr12	+	3767	5	FSM	ENSG00000153179.13	ENST00000542104.6	3507	5	-260	0	-260	0	multi-exon	FALSE	canonical	3	105	junction_2	13.2169398878863	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTATGTGTGTTTATT	64609304	True	NA	13	True	ATTAAA	-15	NA	64610234	64697564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64610744_64684786_64684895_64688215_64688454_64691469_64691580_64694762
WTC11_00018548	chr12	+	4788	13	FSM	ENSG00000174106.3	ENST00000308330.3	4780	13	-19	11	-19	-11	multi-exon	TRUE	canonical	3	132	junction_1	12.7614327826724	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAACATTTTAAGTG	65168063	True	NA	38	True	ATTAAA	-33	NA	65169563	65248344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135_65240239_65240908_65241088_65243387_65243470_65245668_65245775_65245860_65245940_65246161
WTC11_00018549	chr12	+	580	1	FSM	ENSG00000276853.1	ENST00000621847.1	656	1	55	21	55	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTAATTGGCGTACACA	65171304	False	NA	NA	False	AATAAA	-2	NA	65171316	65171896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65171300_65171900
WTC11_00018550	chr12	+	291	2	Antisense	novelGene_ENSG00000241749.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCAGAAAAAGAGTGG	NA	False	NA	NA	False	NA	NA	NA	65805726	65813578	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_65805744_65813304
WTC11_00018552	chr12	+	4488	5	FSM	ENSG00000149948.14	ENST00000403681.7	4117	5	-371	0	-348	0	multi-exon	FALSE	canonical	0	0	junction_3	10.0249688278817	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGAGGGAGACACTCAC	65824094	False	NA	12	True	AATAAA	-17	NA	65824111	65966291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65963244
WTC11_00018558	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_6	102.473316586538	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	67256614	True	NA	4	True	AATAAA	-16	NA	67269357	67319953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
WTC11_00018559	chr12	+	1521	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	-454	-295	-86	295	multi-exon	FALSE	canonical	3	731	junction_2	9.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACGCCTATAATCCCA	67269247	False	NA	NA	False	NA	NA	NA	67269271	67293484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67269786_67281909_67282054_67292621
WTC11_00018563	chr12	+	8468	2	FSM	ENSG00000127334.11	ENST00000393555.3	2209	2	0	-6259	0	-238	multi-exon	FALSE	canonical	3	26	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCCTTGCTTTTTA	67644774	True	NA	NA	False	AATAAA	-24	NA	67648777	67665168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67649183_67657105
WTC11_00018569	chr12	+	13374	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	4	0	-4	multi-exon	FALSE	canonical	3	529	junction_1	64.7598389026245	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCATGGATGACTGTAT	68602542	True	NA	NA	False	AATAAA	-19	NA	68610898	68671897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
WTC11_00018573	chr12	+	6221	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	-8	0	-1	0	multi-exon	FALSE	canonical	3	715	junction_9	64.5184972572997	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	68676192	True	NA	NA	False	AATAAA	-14	NA	68686969	68745809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
WTC11_00018579	chr12	+	11853	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	5869	0	-5869	multi-exon	FALSE	canonical	3	126	junction_1	14.4913767461894	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCAGATGAGTTTTGG	68742975	True	NA	NA	False	TTTAAA	-33	NA	68746175	68775599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
WTC11_00018581	chr12	+	7399	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	-19	110	-19	-110	multi-exon	FALSE	canonical	3	66	junction_8	9.47048045243746	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGTGTTCAGTAAC	68798434	True	NA	17	True	AATAAA	-18	NA	68808157	68845434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
WTC11_00018582	chr12	+	1583	10	FSM	ENSG00000135679.27	ENST00000311420.13	1583	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3036848673136	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATATATTTCTAACTAT	68798549	False	NA	NA	False	NA	NA	NA	68808272	68839867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
WTC11_00018590	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	420.407944739392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222276	True	NA	17	True	AATAAA	-14	NA	69239615	69269939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
WTC11_00018591	chr12	+	2168	10	NNC	ENSG00000111605.18	novel	6584	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_8	281.609045168985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222229	True	NA	17	True	AATAAA	-14	NA	69239568	69269939	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262369_69262563_69269511
WTC11_00018600	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	-7	7	-2	-3	multi-exon	FALSE	canonical	3	83	junction_8	19.8049078513383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGTTTTATTGTATT	69468142	True	NA	23	True	AATAAA	-31	NA	69470380	69579786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
WTC11_00018607	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	2057	junction_8	191.891172861657	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	69555145	True	NA	30	True	AATAAA	-15	NA	69585458	69601570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
WTC11_00018608	chr12	+	2136	16	FSM	ENSG00000166226.13	ENST00000543146.2	2189	16	53	0	53	0	multi-exon	FALSE	canonical	3	12	junction_1	649.842326175272	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACTTGGTTCTTATGTC	69585705	False	NA	25	True	AATAAA	-10	NA	69585718	69601565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69586010_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
WTC11_00018609	chr12	+	852	4	FSM	ENSG00000166226.13	ENST00000548787.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	2057	junction_2	176.524471076644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGGTATGGAAAAAAG	69589040	False	NA	NA	False	NA	NA	NA	69589161	69593606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69589688_69592058_69592160_69592975_69593104_69593509
WTC11_00018614	chr12	+	3036	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	-196	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.1221373211712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAAATGTGATTATCT	69778566	True	NA	6	True	ATTAAA	-17	NA	69778949	69817377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
WTC11_00018620	chr12	+	995	9	FSM	ENSG00000111596.14	ENST00000550160.5	993	9	-2	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	175.681530047982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGAATCTATTTGTGT	70243382	False	NA	NA	False	NA	NA	NA	70243409	70342168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106
WTC11_00018625	chr12	+	2546	13	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_1	236.780298424979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	70278084	True	NA	11	True	AATAAA	-19	NA	70278131	70354993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_70278275_70301704_70301866_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
WTC11_00018637	chr12	+	1046	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	-180	-194	0	194	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACTTAGTCTTGGAAA	71663565	True	NA	NA	False	CATAAA	-32	NA	71664300	71665634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71664581_71664868
WTC11_00018642	chr12	+	506	4	FSM	ENSG00000139291.14	ENST00000546795.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.9755495773239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71697365	71704056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71697535_71698899_71699110_71700831_71700879_71703976
WTC11_00018645	chr12	+	3167	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	-10	0	-10	0	multi-exon	FALSE	canonical	3	77	junction_1	19.1978799285234	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	71837680	True	NA	4	True	AATAAA	-13	NA	71839748	71924313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
WTC11_00018647	chr12	+	463	5	FSM	ENSG00000072657.10	ENST00000549922.1	589	5	0	126	0	-126	multi-exon	FALSE	canonical	2	3	junction_4	2.77263412660235	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTTTATTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	72568629	72621205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_72568657_72575254_72575389_72575486_72575543_72618890_72619039_72621107
WTC11_00018658	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.8471786786049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	78855903	True	NA	13	True	AATAAA	-21	NA	78864773	79452008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
WTC11_00018662	chr12	+	1956	2	NNC	ENSG00000257474.5	novel	554	3	NA	NA	1417	1231	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAATTGTACAATTTAA	79546852	False	NA	13	True	ATTAAA	-4	NA	79546946	79551766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_79547245_79550108
WTC11_00018664	chr12	+	8413	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	-22	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	10.4656050417015	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	81076522	True	NA	NA	False	AATAAA	-21	NA	81078056	81261210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
WTC11_00018666	chr12	+	2020	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	11	33	0	-30	multi-exon	FALSE	canonical	3	31	junction_3	5.28837802627236	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAAGAACCTGTCA	82357862	True	NA	46	True	NA	NA	NA	82358539	82479206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
WTC11_00018668	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	9.41629792788369	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	85867913	True	NA	10	True	AATAAA	-24	NA	85874294	85882992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
WTC11_00018671	chr12	+	764	6	FSM	ENSG00000133641.18	ENST00000552847.5	770	6	-2	8	0	-8	multi-exon	FALSE	canonical	2	3	junction_1	140.049419848852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAAGACTTTTTCTT	88032070	True	NA	NA	False	NA	NA	NA	88035535	88045779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88035739_88036041_88036074_88040147_88040266_88042824_88042921_88043598_88043716_88045581
WTC11_00018672	chr12	+	583	4	FSM	ENSG00000133641.18	ENST00000552803.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	24.1246761636296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCAAATTTATGTAAAG	88032144	False	NA	NA	False	NA	NA	NA	88035609	88043838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598
WTC11_00018673	chr12	+	654	5	FSM	ENSG00000139324.12	ENST00000551088.1	646	5	-8	0	3	0	multi-exon	FALSE	canonical	3	10	junction_2	40.3446093053335	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTCTCCGTGGAAAGG	88138552	True	NA	NA	False	NA	NA	NA	88142298	88160710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88142488_88148287_88148505_88154287_88154388_88160113_88160230_88160678
WTC11_00018674	chr12	+	7200	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	-8	0	3	0	multi-exon	FALSE	canonical	3	83	junction_2	8.32547953378396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	88138552	True	NA	8	True	AATAAA	-19	NA	88142298	88199887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
WTC11_00018675	chr12	+	490	3	FSM	ENSG00000281333.2	ENST00000625763.1	493	3	0	3	0	-3	multi-exon	FALSE	canonical	2	6	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTTCTACCTACAGG	88580400	True	NA	NA	False	NA	NA	NA	88580530	88598215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88580611_88581996_88582139_88597947
WTC11_00018676	chr12	+	2499	1	FSM	ENSG00000274021.1	ENST00000611513.1	2257	1	-244	2	-244	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTAGGTCAGTCCAGT	89350625	False	NA	NA	False	ATTAAA	-22	NA	89350770	89353269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_89350800_89353300
WTC11_00018679	chr12	+	9774	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	267	junction_3	226.48220128743	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366872	True	NA	NA	False	AGTAAA	-27	NA	93377861	93408146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
WTC11_00018680	chr12	+	3828	5	NNC	ENSG00000173598.14	novel	9708	5	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	329.79188513364	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAACAAAAAC	93366935	True	NA	26	True	AATAAA	-22	NA	93377924	93402283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_93378422_93394625_93394720_93395488_93395534_93398770_93398856_93399176
WTC11_00018681	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	139.221047259385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366935	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
WTC11_00018682	chr12	+	15534	6	FSM	ENSG00000198015.14	ENST00000552217.6	15560	6	-19	45	-19	-45	multi-exon	FALSE	canonical	3	562	junction_1	702.320268823277	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCTTTGCTGCAATGA	93451110	True	NA	NA	False	NA	NA	NA	93467494	93516169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93467555_93469188_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501175
WTC11_00018692	chr12	+	3756	2	FSM	ENSG00000120833.14	ENST00000548537.1	3733	2	-23	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571438	True	NA	17	True	AATAAA	-20	NA	93571680	93576206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93571915_93572684
WTC11_00018693	chr12	+	2881	3	FSM	ENSG00000120833.14	ENST00000622746.4	2881	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTACCTTATTTTCAT	93571438	True	NA	NA	False	AATAAA	-14	NA	93571680	93576744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93572187_93572684_93573037_93574721
WTC11_00018694	chr12	+	2415	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	514	-538	-25	0	multi-exon	FALSE	canonical	3	106	junction_1	122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTACCTTATTTTCAT	93569890	True	NA	NA	False	AATAAA	-14	NA	93571874	93576744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93571915_93572684_93573037_93574721
WTC11_00018695	chr12	+	2313	3	NIC	ENSG00000120833.14	novel	2391	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_1	152.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93569915	True	NA	17	True	AATAAA	-20	NA	93571899	93576206	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_93572376_93572684_93573037_93574721
WTC11_00018700	chr12	+	2446	1	FSM	ENSG00000278916.1	ENST00000623122.1	2482	1	34	2	34	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTATGCCAATAAATTC	94459908	True	NA	NA	False	ATTAAA	-15	NA	94460036	94462482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_94460000_94462500
WTC11_00018703	chr12	+	4590	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	-80	0	-19	0	multi-exon	TRUE	canonical	0	0	junction_6	76.1009551313308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	NA	False	NA	103	True	AATAAA	-23	NA	95217726	95302799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00018715	chr12	+	2933	12	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	78.3628981192815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214191	True	NA	14	True	AATAAA	-18	NA	95217768	95301172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00018723	chr12	+	1928	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	-81	27	0	0	multi-exon	TRUE	canonical	3	209	junction_1	188.79872880928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	95474070	False	NA	0	True	NA	NA	NA	95474080	95514299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
WTC11_00018724	chr12	+	3402	11	FSM	ENSG00000111142.14	ENST00000323666.10	3400	11	-2	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	77.5992268002717	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTTTTTTGTTAGAT	95464204	True	NA	59	True	AGTAAA	-18	NA	95474149	95515839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
WTC11_00018729	chr12	+	508	2	Antisense	novelGene_ENSG00000074527.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGATCACCTCGGAAGC	95751047	False	NA	NA	False	NA	NA	NA	95751062	95751657	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_95751217_95751303
WTC11_00018732	chr12	+	4224	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	125	junction_3	6.94172168845741	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	96193131	True	NA	17	True	AATAAA	-20	NA	96194351	96269824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
WTC11_00018733	chr12	+	539	3	FSM	ENSG00000111145.8	ENST00000547249.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGCCAAGCTGTGGG	96193181	True	NA	NA	False	NA	NA	NA	96194401	96223682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96194706_96198025_96198143_96223564
WTC11_00018734	chr12	+	684	4	FSM	ENSG00000111145.8	ENST00000549985.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	55.874860178796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTATATATGAAAATCTG	NA	False	NA	NA	False	TTTAAA	-19	NA	96247130	96267357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96247284_96247602_96247735_96259730_96259854_96267081
WTC11_00018741	chr12	+	4039	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	-24	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	51.4230385030765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	96903431	True	NA	6	True	ATTAAA	-18	NA	96907232	96953780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
WTC11_00018742	chr12	+	4318	15	NIC	ENSG00000139350.12	novel	4015	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	95	junction_1	47.60578982109	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	96903455	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
WTC11_00018747	chr12	+	3627	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	-12	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	184.028983224563	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	98483709	True	NA	30	True	AATAAA	-21	NA	98515617	98535634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
WTC11_00018748	chr12	+	2465	8	FSM	ENSG00000120802.14	ENST00000343315.9	2465	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	235.250279229486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAAAAGGGCCAGGCGC	98483709	True	NA	NA	False	NA	NA	NA	98515617	98548828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544441_98544538_98544950_98545062_98546358_98546448_98547572
WTC11_00018749	chr12	+	2387	6	FSM	ENSG00000120802.14	ENST00000393053.6	2374	6	-13	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	256.129342325318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAAAAATTAGCT	98483709	True	NA	NA	False	NA	NA	NA	98515617	98548957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98546358_98546448_98547572
WTC11_00018757	chr12	+	5984	8	FSM	ENSG00000075415.15	ENST00000552981.6	5984	8	0	0	0	0	multi-exon	FALSE	canonical	3	2176	junction_1	293.841481630029	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTTGAATCATTTGT	98549613	True	NA	12	True	AATAAA	-9	NA	98593685	98606367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
WTC11_00018762	chr12	+	7201	27	FSM	ENSG00000120868.14	ENST00000551964.6	7201	27	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_17	13.9977280489565	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGATTGTTTCATTCT	98643321	True	NA	12	True	AATAAA	-26	NA	98645289	98735433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98645836_98648318_98648498_98648625_98648816_98649486_98649685_98659159_98659344_98662455_98662569_98662674_98662807_98665552_98665792_98666189_98666358_98667512_98667645_98670972_98671087_98671534_98671720_98677424_98677552_98680276_98680403_98683142_98683275_98686747_98686874_98699407_98699570_98703370_98703500_98706484_98706611_98708584_98708705_98712318_98712436_98715426_98715553_98723192_98723313_98723638_98723765_98725414_98725541_98727172_98727317_98732419
WTC11_00018767	chr12	+	2760	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	-1101	0	-136	0	multi-exon	FALSE	canonical	3	21	junction_9	93.2448389992712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	NA	False	NA	6	True	AATAAA	-14	NA	100199728	100224421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
WTC11_00018768	chr12	+	1753	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	-6	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	98.1396963516802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	100198236	True	NA	8	True	AATAAA	-16	NA	100200810	100224423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
WTC11_00018769	chr12	+	1741	11	FSM	ENSG00000075089.10	ENST00000188312.7	1737	11	-4	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	26.7477101823689	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	100198236	True	NA	9	True	AATAAA	-17	NA	100200810	100224424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
WTC11_00018771	chr12	+	5621	18	NIC	ENSG00000136021.19	novel	5977	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	15.0049588112509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCATATTAAGTTGTGA	100265026	True	NA	14	True	AATAAA	-18	NA	100267136	100341715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
WTC11_00018772	chr12	+	6037	18	FSM	ENSG00000136021.19	ENST00000360820.7	5977	18	-60	0	-23	0	multi-exon	FALSE	canonical	2	19	junction_1	23.6640266896729	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCATATTAAGTTGTGA	100267088	False	NA	14	True	AATAAA	-18	NA	100267116	100341715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100267793_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
WTC11_00018779	chr12	+	2636	8	FSM	ENSG00000111666.11	ENST00000549872.5	2001	8	-125	-510	-93	510	multi-exon	FALSE	canonical	3	176	junction_4	11.7924223334223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATATTGAAGAAAACAG	101697527	False	NA	NA	False	AAAAAG	-39	NA	101697546	101727549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293
WTC11_00018780	chr12	+	1583	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	155	junction_8	16.6508258053467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	101696152	True	NA	10	True	AATAAA	-22	NA	101697628	101729074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
WTC11_00018781	chr12	+	1633	9	NNC	ENSG00000111666.11	novel	1572	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.6817932265332	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	101696195	True	NA	10	True	AATAAA	-22	NA	101697671	101729074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726498_101728900
WTC11_00018784	chr12	+	1215	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	-106	-133	-44	133	multi-exon	FALSE	canonical	3	262	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTGGCAATAAATAACTGA	NA	False	NA	NA	False	AATAAA	-13	NA	102120138	102149140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_102120287_102123885_102124042_102148229
WTC11_00018789	chr12	+	2436	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_6	78.6949101841338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117173	True	NA	9	True	AATAAA	-23	NA	102120244	102197520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
WTC11_00018793	chr12	+	2212	7	FSM	ENSG00000185480.12	ENST00000417507.6	2212	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	76.0060304625012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACCTGGCATGTAAGAAA	102123977	True	NA	NA	False	AAAACA	-35	NA	102123987	102197361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
WTC11_00018798	chr12	+	3927	16	FSM	ENSG00000166598.16	ENST00000680653.1	3903	16	-24	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_6	707.591677609497	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103930306	True	NA	8	True	AATAAA	-11	NA	103930331	103947922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018799	chr12	+	3203	18	FSM	ENSG00000166598.16	ENST00000680391.1	3184	18	-19	0	0	0	multi-exon	FALSE	canonical	3	96	junction_13	1343.66753951541	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTGACTCAGGCTTA	103930306	True	NA	101	True	NA	NA	NA	103930331	103948015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943574_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018800	chr12	+	3112	18	FSM	ENSG00000166598.16	ENST00000550595.2	3112	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	1323.84769506284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTACTGTGGAAGGTTCT	103930306	True	NA	NA	False	ACTAAA	-3	NA	103930331	103953931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103953385
WTC11_00018805	chr12	+	3255	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	-7	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	688.245221105821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735934	True	NA	8	True	AATAAA	-11	NA	103930350	103947922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018807	chr12	+	6609	15	FSM	ENSG00000166598.16	ENST00000681704.1	6609	15	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_6	732.248358252352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCCCAAATACTCAGT	103735966	True	NA	-2	True	AATAAA	-1	NA	103930382	103947912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018808	chr12	+	3459	17	FSM	ENSG00000166598.16	ENST00000681910.1	3458	17	-1	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_6	686.307590934998	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735965	True	NA	8	True	AATAAA	-11	NA	103930381	103947922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018810	chr12	+	2903	18	FSM	ENSG00000166598.16	ENST00000681174.1	2903	18	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1347.94810872163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735993	True	NA	8	True	AATAAA	-11	NA	103930409	103947922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018811	chr12	+	2783	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	-1	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	668.623452923473	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTGACTGTCTTG	103735993	True	NA	13	True	AATAAA	-16	NA	103930409	103947927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
WTC11_00018813	chr12	+	3365	11	FSM	ENSG00000139372.15	ENST00000266775.13	1602	11	-81	-1682	-58	0	multi-exon	FALSE	canonical	3	63	junction_1	117.640809245772	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	NA	False	NA	11	True	AATAAA	-26	NA	103965763	103988874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
WTC11_00018816	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	41.2579958580421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	103957500	True	NA	11	True	AATAAA	-26	NA	103965871	103988874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
WTC11_00018823	chr12	+	647	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	-42	-77	-42	77	mono-exon	FALSE	NA	NA	NA	NA	NA	559	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGGCTGGACAAACTG	104265170	False	NA	NA	False	AATAAA	-40	NA	104265266	104265913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104265300_104265900
WTC11_00018827	chr12	+	3845	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	124.640785635309	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	32	True	ATTAAA	-42	NA	104286921	104350305	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
WTC11_00018830	chr12	+	3945	15	FSM	ENSG00000198431.17	ENST00000527688.5	3858	15	153	-240	-24	216	multi-exon	FALSE	canonical	1	1	junction_13	163.301977067902	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCACTTAATCTTCTTA	104287827	True	NA	NA	False	AATAAA	-43	NA	104288870	104350523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104346018_104346156_104348352
WTC11_00018838	chr12	+	5840	33	FSM	ENSG00000136051.15	ENST00000550053.5	5819	33	-21	0	-20	0	multi-exon	TRUE	canonical	3	11	junction_8	45.2532694778786	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCCTGGATGTTT	105101419	True	NA	15	True	AATAAA	-15	NA	105107693	105169130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121088_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
WTC11_00018843	chr12	+	1311	6	FSM	ENSG00000235162.9	ENST00000443585.6	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_5	28.8929057036498	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTTAATTATTT	105325907	True	NA	12	True	ATTAAA	-20	NA	105330690	105371518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367471_105367510_105370633
WTC11_00018845	chr12	+	332	1	FSM	ENSG00000257773.1	ENST00000546640.1	1110	1	402	376	402	-376	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGATCAAAGAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	106016298	106016630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106016300_106016600
WTC11_00018851	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.7987558838155	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	106771665	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
WTC11_00018861	chr12	+	293	2	FSM	ENSG00000198855.7	ENST00000549641.1	397	2	0	104	0	-104	multi-exon	TRUE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTCTGAAACTTGTTAA	108516567	False	NA	NA	False	NA	NA	NA	108517120	108525728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108517274_108525588
WTC11_00018865	chr12	+	3685	4	FSM	ENSG00000136003.16	ENST00000545932.5	3685	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	676.851698839725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAAATAATGG	108552054	True	NA	-13	True	CATAAA	-28	NA	108562581	108569341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108564393_108565320_108565432_108567189_108567269_108567657
WTC11_00018866	chr12	+	997	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	-14	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	75.5360013503495	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552054	True	NA	14	True	AATAAA	-15	NA	108562581	108569368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
WTC11_00018872	chr12	+	1896	12	NIC	ENSG00000135093.13	novel	3749	13	NA	NA	1	5	intron_retention	FALSE	canonical	2	6	junction_2	15.0140430132362	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCACTTTCGATTG	109051980	True	NA	NA	False	ATTAAA	-22	NA	109052604	109086382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_109052762_109056681_109056792_109067523_109067628_109071611_109071711_109072304_109072351_109073437_109073533_109081333_109081394_109081932_109082020_109082662_109082744_109082842_109083063_109084952_109085074_109085666
WTC11_00018875	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	96.6639367430619	8031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109089479	True	NA	23	True	AATAAA	-16	NA	109097596	109110992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
WTC11_00018876	chr12	+	498	3	FSM	ENSG00000076248.11	ENST00000540158.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	149	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACTGGAGTTAAGCCA	109089561	False	NA	NA	False	TTTAAA	-4	NA	109097678	109099346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109097812_109098431_109098639_109099188
WTC11_00018877	chr12	+	2221	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	-70	-21	-70	4	multi-exon	FALSE	canonical	3	869	junction_5	46.189176221275	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCAAGTGTCCTTTGTG	109089930	False	NA	27	True	AATAAA	-20	NA	109098047	109110996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
WTC11_00018880	chr12	+	487	3	FSM	ENSG00000076555.16	ENST00000537347.1	1254	3	767	0	767	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGAGGAGATCAAACAC	NA	False	NA	NA	False	NA	NA	NA	109242436	109246386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109242593_109245625_109245749_109246178
WTC11_00018884	chr12	+	1472	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	-24	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	53.2762552644234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475757	True	NA	11	True	ATTAAA	-17	NA	109477627	109490722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
WTC11_00018885	chr12	+	1127	9	FSM	ENSG00000151148.14	ENST00000536398.5	1120	9	-7	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	52.0576603392815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475757	True	NA	11	True	ATTAAA	-17	NA	109477627	109490722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
WTC11_00018887	chr12	+	5736	28	FSM	ENSG00000151148.14	ENST00000342494.8	5730	28	-6	0	0	0	multi-exon	FALSE	canonical	3	73	junction_16	55.2602770236927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTGCGTTCTGCATT	109475757	True	NA	14	True	ATTAAA	-17	NA	109477627	109536702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
WTC11_00018893	chr12	+	1775	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	-5	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	44.2537576000998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	109571755	True	NA	8	True	AATAAA	-16	NA	109573831	109597261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
WTC11_00018895	chr12	+	1725	9	FSM	ENSG00000110921.14	ENST00000636996.1	1725	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	49.1401058199919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTCCAGGCCACCA	109572753	False	NA	10	True	AATAAA	-18	NA	109574829	109597263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109574901_109575997_109576146_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
WTC11_00018898	chr12	+	581	4	FSM	ENSG00000139437.18	ENST00000551627.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	9.84321537348893	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCCTGCTCAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	109912972	109916741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109913073_109914441_109914628_109915402_109915547_109916590
WTC11_00018903	chr12	+	3000	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	22	26	0	-26	multi-exon	FALSE	canonical	3	10	junction_11	34.7624762073434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTAGTAAAAACCTTGAG	110122829	True	NA	NA	False	NA	NA	NA	110124356	110169156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
WTC11_00018904	chr12	+	3136	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	-12	0	10	0	multi-exon	FALSE	canonical	2	50	junction_1	19.1740726432439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	110122817	True	NA	20	True	AATAAA	-34	NA	110124344	110218793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
WTC11_00018909	chr12	+	4402	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	51	0	51	0	multi-exon	FALSE	canonical	3	35	junction_20	115.813762135594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	110281127	False	NA	NA	False	AATAAA	-14	NA	110281166	110351090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
WTC11_00018911	chr12	+	5575	2	FSM	ENSG00000174437.18	ENST00000313432.5	5575	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	110345379	False	NA	NA	False	AATAAA	-17	NA	110345436	110351093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110346119_110346200
WTC11_00018915	chr12	+	931	3	FSM	ENSG00000204852.17	ENST00000546643.1	926	3	-5	0	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	22.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTATCATCAGAGTGA	110613258	True	NA	NA	False	ATTAAA	-24	NA	110614118	110629282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110614403_110626361_110626493_110628766
WTC11_00018918	chr12	+	2217	15	FSM	ENSG00000204852.17	ENST00000551590.5	2309	15	92	0	-5	0	multi-exon	FALSE	non_canonical	1	11	junction_10	10.1055652479014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	110613258	True	NA	NA	False	NA	NA	NA	110614118	110649430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
WTC11_00018928	chr12	+	5431	8	FSM	ENSG00000111252.11	ENST00000341259.7	5431	8	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	9.65739644637461	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGTCATAATATTTAA	111405121	True	NA	11	True	ATTAAA	-19	NA	111405922	111451623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111406278_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
WTC11_00018929	chr12	+	2891	13	FSM	ENSG00000111271.15	ENST00000549590.5	2888	13	-3	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	18.3913853625972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGCGATTCTCCTGCCT	111683183	True	NA	NA	False	NA	NA	NA	111686067	111745634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642
WTC11_00018930	chr12	+	4094	22	FSM	ENSG00000111271.15	ENST00000455480.6	4071	22	-23	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	34.844715453155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGTGGACTTTCTG	111683168	True	NA	13	True	AGTAAA	-10	NA	111686052	111757094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111710272_111710366_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
WTC11_00018932	chr12	+	589	3	FSM	ENSG00000111271.15	ENST00000514847.5	595	3	0	6	0	-6	multi-exon	FALSE	canonical	3	124	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCATGTTGCTTGTCTT	NA	False	NA	NA	False	AATACA	-10	NA	111712523	111721983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111712658_111715820_111715963_111721670
WTC11_00018934	chr12	+	470	4	FSM	ENSG00000111271.15	ENST00000550198.5	470	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	44.3195467285285	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTGTGCCCAAAGAGAACA	NA	False	NA	NA	False	NA	NA	NA	111747159	111749203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111747187_111747294_111747386_111748316_111748476_111749010
WTC11_00018935	chr12	+	1019	4	FSM	ENSG00000111271.15	ENST00000547491.1	1010	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	91	junction_1	16.4991582276861	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCTGTCACTGATGTG	NA	False	NA	NA	False	GGGGCT	-36	NA	111748736	111756520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111749346_111753771_111753916_111755667_111755746_111756332
WTC11_00018936	chr12	+	2618	2	FSM	ENSG00000111271.15	ENST00000512792.2	2618	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	NA	False	NA	18	True	AGTAAA	-15	NA	111752729	111757099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111753916_111755667
WTC11_00018943	chr12	+	2185	13	NIC	ENSG00000089022.14	novel	1630	14	NA	NA	9	256	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	143.630385016542	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGATTCTGGTTTCAAT	111839009	True	NA	8	True	AGTAAA	-16	NA	111842236	111893417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
WTC11_00018950	chr12	+	3201	12	FSM	ENSG00000135148.12	ENST00000257604.9	3178	12	-23	0	-16	0	multi-exon	FALSE	canonical	3	22	junction_1	68.8943375907347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGTCTTGTGGTTCCT	112121723	True	NA	14	True	AATAAA	-18	NA	112125521	112153603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112126150_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
WTC11_00018952	chr12	+	2655	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	-22	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	21.5326006920201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	112121739	True	NA	15	True	AATAAA	-19	NA	112125537	112153604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
WTC11_00018954	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	53.4935094712953	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	112401272	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
WTC11_00018957	chr12	+	633	3	FSM	ENSG00000111331.14	ENST00000548514.2	1427	3	109	685	9	-241	multi-exon	FALSE	canonical	2	3	junction_2	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGCCACTTGGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	112938533	112944651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112938708_112941569_112941853_112944475
WTC11_00018960	chr12	+	3455	9	FSM	ENSG00000135144.8	ENST00000257600.3	3455	9	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	5.88297331287505	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTCTTTTCCTGCCAA	113057675	True	NA	18	True	AATAAA	-18	NA	113057689	113098028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113058452_113077423_113078106_113093161_113093224_113093538_113093701_113094037_113094100_113094788_113094948_113095041_113095204_113095324_113095415_113096714
WTC11_00018963	chr12	+	1914	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	-16	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	104.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	113185401	True	NA	6	True	AATAGA	-11	NA	113185525	113192361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113186022_113186682_113187049_113191309
WTC11_00018966	chr12	+	5266	28	FSM	ENSG00000186815.13	ENST00000335509.11	5248	28	-18	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	15.4872397584617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	113219036	True	NA	14	True	ACTAAA	-20	NA	113221445	113298585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113221627_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
WTC11_00018976	chr12	+	465	4	FSM	ENSG00000151176.8	ENST00000548997.1	465	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	88.5023540176569	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGGCTCCTGT	113354840	False	NA	NA	False	NA	NA	NA	113358753	113374860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113358891_113372648_113372808_113374473_113374575_113374792
WTC11_00018980	chr12	+	1283	4	FSM	ENSG00000135119.15	ENST00000677328.1	1389	4	16	90	16	-90	multi-exon	FALSE	canonical	1	3	junction_1	16.779617264871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCTCCATGGGGGCAGA	116759597	True	NA	NA	False	NA	NA	NA	116759950	116810430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116760622_116766813_116766915_116779194_116779349_116810073
WTC11_00018981	chr12	+	6220	11	FSM	ENSG00000174989.13	ENST00000652555.1	4861	11	-8	-1351	-8	1351	multi-exon	FALSE	canonical	3	29	junction_1	25.2128935269239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGTGTGAAATGGTG	116908888	True	NA	9	True	AATAAA	-19	NA	116910941	117032499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116911356_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
WTC11_00018983	chr12	+	2452	11	FSM	ENSG00000174989.13	ENST00000309909.10	2452	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	31.8472918785884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGATGCGTATGGAATT	116916639	False	NA	67	True	NA	NA	NA	116918692	117029111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116918727_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
WTC11_00018984	chr12	+	509	2	FSM	ENSG00000174989.13	ENST00000551773.1	511	2	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTTTTAGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	116978066	116985402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116978379_116985205
WTC11_00018985	chr12	+	2284	4	ISM	ENSG00000174989.13	ENST00000309909.10	2452	11	91305	-462	31931	462	3prime_fragment	FALSE	canonical	3	97	junction_3	6.79869268479038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAACCAATAGTTAGTTA	117009834	True	NA	NA	False	GATAAA	-19	NA	117009997	117029573	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_117010451_117024146_117024321_117027393_117027505_117028027
WTC11_00018988	chr12	+	2468	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	-19	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	140.052764555021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011043	True	NA	NA	False	AATAAA	-24	NA	118016702	118032234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
WTC11_00018989	chr12	+	2648	12	NIC	ENSG00000111445.14	novel	2449	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_11	104.946188493622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTGAATGAGGTGT	118011069	True	NA	9	True	ATTAAA	-15	NA	118016728	118033130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181_118032619_118032944
WTC11_00019000	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_5	17.763883459299	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119668061	False	NA	NA	False	AATAAA	-16	NA	119668132	119681619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
WTC11_00019002	chr12	+	3980	2	FSM	ENSG00000111725.11	ENST00000542698.1	4019	2	39	0	39	0	multi-exon	FALSE	canonical	3	248	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119677374	False	NA	NA	False	AATAAA	-16	NA	119677393	119681619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_119680002_119680247
WTC11_00019022	chr12	+	767	1	FSM	ENSG00000111775.3	ENST00000549525.1	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTGAGAGTTACTTT	120439948	False	NA	24	True	AATAAA	-21	NA	120439970	120440737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120440000_120440700
WTC11_00019023	chr12	+	4248	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	170	junction_2	36.6090456338624	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	120442214	True	NA	NA	False	AATAAA	-18	NA	120446433	120463749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
WTC11_00019026	chr12	+	706	3	FSM	ENSG00000088986.11	ENST00000392508.2	697	3	-9	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	1761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTGTGTGAATTACAA	120444837	True	NA	11	True	AATAAA	-14	NA	120496081	120498491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496217_120496401_120496554_120498072
WTC11_00019027	chr12	+	967	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	-63	-185	-32	42	multi-exon	FALSE	canonical	3	3839	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCACTTGATCAGATGC	120444805	True	NA	55	True	NA	NA	NA	120496049	120498535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496554_120498072
WTC11_00019028	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	38	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120444868	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496217_120496415_120496554_120498072
WTC11_00019036	chr12	+	1646	6	FSM	ENSG00000157782.10	ENST00000316803.8	1597	6	-62	13	-62	-13	multi-exon	FALSE	canonical	3	34	junction_1	4.09878030638384	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAGAGCAAGACAGCC	120640313	True	NA	3	True	AATAAA	-5	NA	120640563	120667311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120641340_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
WTC11_00019039	chr12	+	841	3	FSM	ENSG00000110917.8	ENST00000412616.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	771	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCGAGTAGAGAGCAGCC	120687230	False	NA	32	True	ATTAAA	-17	NA	120687244	120696690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120687532_120694090_120694270_120696315
WTC11_00019047	chr12	+	1830	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	6	0	6	0	multi-exon	FALSE	canonical	3	11	junction_2	33.8472877626685	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	121210060	False	NA	-32	True	NA	NA	NA	121210070	121234070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
WTC11_00019048	chr12	+	1784	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	-24	0	-12	0	multi-exon	FALSE	canonical	3	87	junction_7	9.85682630431258	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208297	True	NA	4	True	ATTAAA	-16	NA	121210104	121234106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
WTC11_00019051	chr12	+	2071	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	-20	0	16	0	multi-exon	FALSE	canonical	3	55	junction_2	183.558044104734	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	121392462	True	NA	24	True	AATAAA	-16	NA	121400098	121424348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
WTC11_00019055	chr12	+	2622	2	FSM	ENSG00000276045.3	ENST00000646827.1	2138	2	-52	-432	-52	432	multi-exon	FALSE	canonical	3	249	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTCCATATGTAT	121623454	True	NA	4	True	AATAAA	-15	NA	121626497	121643109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121627051_121641040
WTC11_00019057	chr12	+	2769	13	FSM	ENSG00000188735.13	ENST00000342607.10	2766	13	-3	0	-3	0	multi-exon	FALSE	canonical	3	14	junction_12	34.55631474693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGGGAGGGGTGGGTG	121708137	True	NA	NA	False	NA	NA	NA	121712748	121778956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608_121776445_121778076
WTC11_00019059	chr12	+	3160	6	FSM	ENSG00000188735.13	ENST00000540377.1	962	6	0	-2198	0	0	multi-exon	FALSE	canonical	3	22	junction_2	38.6243446546346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATCGCTTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	121752128	121778356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121752224_121761648_121761739_121773420_121773514_121774657_121774723_121775061_121775131_121775608
WTC11_00019064	chr12	+	2312	6	FSM	ENSG00000110801.14	ENST00000261817.6	2307	6	-9	4	0	-4	multi-exon	FALSE	canonical	3	27	junction_4	165.742450808476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATCCTTTCTTTTTTA	121883554	True	NA	16	True	AATAAA	-13	NA	121888761	121917859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915858_121915945_121916283
WTC11_00019065	chr12	+	1098	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	-55	1682	3	0	multi-exon	FALSE	canonical	3	434	junction_2	11.1642285895623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGAGTTTTACAGTG	121883527	True	NA	-5	True	NA	NA	NA	121888734	121916615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
WTC11_00019070	chr12	+	3722	6	FSM	ENSG00000110987.9	ENST00000261822.5	3722	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	20.7306536317599	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGGTTTTGTCTCA	122018788	True	NA	11	True	AATAAA	-17	NA	122021883	122062044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885_122044054_122054804_122054927_122059091
WTC11_00019073	chr12	+	8390	17	FSM	ENSG00000175727.14	ENST00000319080.12	8390	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	32.4265998063318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATGTGTGGCCTTA	122073684	True	NA	7	True	AATAAA	-23	NA	122078755	122147344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122079267_122127255_122127363_122127882_122127969_122129136_122129227_122129587_122129630_122129940_122130113_122130843_122130934_122132291_122132384_122133347_122133988_122135223_122135346_122135488_122135667_122137468_122137591_122138193_122138296_122138423_122138552_122138814_122138939_122140953_122141084_122141690
WTC11_00019076	chr12	+	1078	3	FSM	ENSG00000175727.14	ENST00000538061.1	1078	3	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	63.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTTCTATGCTCTAT	122129566	False	NA	27	True	AATACA	-14	NA	122129941	122134164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122130113_122130843_122130934_122133347
WTC11_00019077	chr12	+	9072	9	FSM	ENSG00000175727.14	ENST00000538698.5	5097	9	-1049	-2926	-1049	0	multi-exon	FALSE	canonical	3	51	junction_4	13.7289611770155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATGTGTGGCCTTA	122131450	False	NA	7	True	AATAAA	-23	NA	122131475	122147344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122133988_122135223_122135346_122135488_122135667_122137468_122137591_122138193_122138296_122138423_122138552_122138814_122138939_122140953_122141084_122141690
WTC11_00019083	chr12	+	6922	64	NIC	ENSG00000184445.12	novel	6974	64	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	87	junction_16	79.1180982417282	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCATAATTGCCCCATAAA	122523814	True	NA	0	True	AATAAA	-12	NA	122527246	122626373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158_122544270_122546175_122546270_122546621_122546675_122547414_122547531_122547914_122547970_122549765_122549865_122551318_122551363_122551457_122551524_122551620_122551697_122557383_122557510_122557599_122557690_122561920_122561975_122562637_122562700_122568260_122568373_122569680_122569825_122570875_122570933_122571024_122571127_122572936_122573057_122573141_122573286_122574281_122574381_122575542_122575647_122575799_122575900_122576894_122577030_122577671_122577792_122579904_122579978_122580602_122580671_122582704_122582986_122584277_122584451_122584892_122584991_122585635_122585775_122586700_122586758_122587710_122587875_122588711_122588817_122590606_122590736_122591336_122591454_122594275_122594386_122597730_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
WTC11_00019086	chr12	+	2911	21	ISM	ENSG00000184445.12	ENST00000333479.12	6974	64	69993	21	-1	0	3prime_fragment	FALSE	canonical	3	217	junction_1	35.2276879740922	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAATTGCCCCATAAAGA	122597195	False	NA	2	True	AATAAA	-14	NA	122597241	122626375	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
WTC11_00019093	chr12	+	2745	9	NNC	ENSG00000139726.11	novel	2719	8	NA	NA	-52	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	552.062482310653	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	122720300	True	NA	17	True	ATTAAA	-18	NA	122752771	122771064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033_122769221_122769246
WTC11_00019106	chr12	+	2274	6	FSM	ENSG00000111325.16	ENST00000406539.6	2274	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	49.829308644612	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCGAGGGAGTCAGGG	122974222	True	NA	103	True	NA	NA	NA	122974741	122979533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975122_122975810_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
WTC11_00019108	chr12	+	1797	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	96	junction_4	30.1298117411237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	122973448	True	NA	6	True	TATAAA	-13	NA	122975202	122980041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
WTC11_00019111	chr12	+	5618	7	FSM	ENSG00000256028.2	ENST00000540866.2	5618	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	726.276041797393	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCTGTTCTGTGGCT	122975261	False	NA	15	True	ATTAAA	-15	NA	122975319	122982907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122978570_122978752_122981880_122981956_122982075_122982468
WTC11_00019112	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	489.940241253972	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	122980042	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019115	chr12	+	1486	6	NIC	ENSG00000182196.14	novel	1591	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	328	junction_1	604.23617898964	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAAAGAGCAGCACTT	122980154	False	NA	-32	True	NA	NA	NA	122980178	122982860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980813_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019117	chr12	+	1501	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	-10	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	481.090677523479	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980154	False	NA	17	True	ATTAAA	-17	NA	122980178	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019119	chr12	+	1075	6	NIC	ENSG00000182196.14	novel	910	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	777.574330852041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTTTCTCTGTTCTGTG	122979100	True	NA	12	True	ATTAAA	-12	NA	122980230	122982904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980386_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019120	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	680.954212851349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	122979132	True	NA	-97	True	NA	NA	NA	122980262	122982795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019121	chr12	+	1043	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	741.239232636805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122979170	False	NA	17	True	ATTAAA	-17	NA	122980300	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980386_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019122	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	777.574330852041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980442	False	NA	17	True	ATTAAA	-17	NA	122980494	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019125	chr12	+	1685	4	FSM	ENSG00000182196.14	ENST00000539576.5	1684	4	-1	0	0	0	multi-exon	FALSE	canonical	3	799	junction_1	390.048714906228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122968646	True	NA	14	True	ATTAAA	-14	NA	122980680	122982906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981880_122981956_122982539_122982619
WTC11_00019126	chr12	+	1415	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	-418	26	0	0	multi-exon	FALSE	canonical	3	256	junction_2	586.542888457443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAAAGGCCCCCTGG	122979132	True	NA	-9	True	NA	NA	NA	122980262	122982883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019127	chr12	+	1278	5	FSM	ENSG00000182196.14	ENST00000536502.5	1273	5	-5	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	478.983493974479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTCTCAGCTATTAAA	122968681	True	NA	-19	True	NA	NA	NA	122980715	122982873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00019129	chr12	+	1782	3	FSM	ENSG00000182196.14	ENST00000540708.5	1782	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	637.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCCCTGGATAGACT	122968681	True	NA	-2	True	NA	NA	NA	122980715	122982890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980813_122981128_122981880_122981956
WTC11_00019131	chr12	+	1370	4	FSM	ENSG00000182196.14	ENST00000392433.3	1370	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	781.164230847493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980853	True	NA	17	True	ATTAAA	-17	NA	122980927	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980988_122981128_122981880_122981956_122982075_122982468
WTC11_00019136	chr12	+	1634	3	FSM	ENSG00000130921.9	ENST00000538888.6	1634	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	93	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGGGTTCTGGGGTG	123231217	True	NA	NA	False	NA	NA	NA	123233435	123257797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233532_123253646_123254200_123256812
WTC11_00019137	chr12	+	2074	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	9	-529	-1	410	multi-exon	FALSE	canonical	3	174	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCACGTTGATTTGCA	123231226	True	NA	NA	False	NA	NA	NA	123233444	123258489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233532_123253646_123253957_123256812
WTC11_00019138	chr12	+	1923	3	FSM	ENSG00000130921.9	ENST00000366329.7	2056	3	133	0	117	0	multi-exon	FALSE	canonical	2	8	junction_1	83	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCGGGCATGGTGGCTC	123231360	False	NA	NA	False	AAAACA	-1	NA	123233578	123258079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233925_123253646_123253957_123256812
WTC11_00019148	chr12	+	1688	2	FSM	ENSG00000184209.15	ENST00000527158.2	2161	2	0	473	0	-473	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTGGAAGGGAAAGCAAA	123455570	True	NA	NA	False	NA	NA	NA	123458118	123472681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123458217_123471091
WTC11_00019154	chr12	+	594	5	FSM	ENSG00000111364.16	ENST00000544429.5	574	5	-20	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	149.737061210644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCAAAAAGGTGTTTT	123596801	True	NA	NA	False	NA	NA	NA	123602076	123607770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123602257_123605930_123605995_123606072_123606160_123607431_123607524_123607599
WTC11_00019155	chr12	+	2767	11	FSM	ENSG00000111364.16	ENST00000542286.5	2767	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	90.8402994270715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGGTAAAGTTTACT	123596801	True	NA	NA	False	AAAAAG	-34	NA	123602076	123619716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619447
WTC11_00019178	chr12	+	724	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	43	35	-11	-35	multi-exon	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGTTAATTAAAAATTTA	123967992	True	NA	NA	False	NA	NA	NA	123973261	123974518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123973353_123973885
WTC11_00019180	chr12	+	4315	5	FSM	ENSG00000179195.16	ENST00000337815.9	4312	5	-3	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	4.43705983732471	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTGACATGTAGT	123967942	True	NA	17	True	AATAAA	-18	NA	123973211	124015427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123973353_123973885_123974021_123988042_123988139_124011380_124011442_124011545
WTC11_00019192	chr12	+	3467	1	FSM	ENSG00000279233.1	ENST00000623804.1	3467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAGAA	125138230	False	NA	NA	False	AAAAAG	-1	NA	125138244	125141711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_125138200_125141700
WTC11_00019200	chr12	+	2695	6	FSM	ENSG00000132341.12	ENST00000448750.7	2455	6	-240	0	-240	0	multi-exon	FALSE	canonical	3	165	junction_1	5759.86660956658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTGAATCATCTCTA	130871779	False	NA	34	True	AATATA	-19	NA	130871796	130877676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_130872127_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
WTC11_00019203	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	11113	junction_1	1334.10244484197	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	130716725	True	NA	36	True	AATATA	-21	NA	130872065	130877678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
WTC11_00019219	chr12	+	2298	9	FSM	ENSG00000198598.7	ENST00000535291.5	2301	9	0	3	0	-3	multi-exon	FALSE	canonical	3	139	junction_7	65.485566157742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGGGCTCCCTGGTGCT	131838045	False	NA	16	True	NA	NA	NA	131838055	131851780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849801_131850060_131850924
WTC11_00019228	chr12	+	1262	4	NIC	ENSG00000177192.14	novel	4041	6	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	80.1845094488677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGGTTTGCCTTTTT	131917787	True	NA	13	True	ATTAAA	-23	NA	131929220	131943857	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_131929797_131929906_131930136_131932174_131932313_131943538
WTC11_00019230	chr12	+	1606	6	NIC	ENSG00000177192.14	novel	4041	6	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	83.3800935475609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAATCCTTGGTTTGCCT	131917842	True	NA	9	True	ATTAAA	-19	NA	131929275	131943853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_131929405_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
WTC11_00019231	chr12	+	4033	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	8	0	-8	multi-exon	FALSE	canonical	3	133	junction_1	43.2989607265579	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAAGTTGCCTTTCAT	131917842	True	NA	-3	True	AATAAA	-11	NA	131929275	131945888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
WTC11_00019234	chr12	+	838	3	FSM	ENSG00000177192.14	ENST00000535067.5	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	98	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGGTTTGCCTTTTT	131929729	False	NA	13	True	ATTAAA	-23	NA	131929754	131943857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131930136_131932174_131932313_131943538
WTC11_00019235	chr12	+	2450	2	FSM	ENSG00000177192.14	ENST00000543754.1	1378	2	-1072	0	-1072	0	multi-exon	FALSE	canonical	3	249	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131939843	False	NA	15	True	ATTAAA	-25	NA	131939854	131943859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131941984_131943538
WTC11_00019240	chr12	+	3908	7	FSM	ENSG00000183495.14	ENST00000330386.7	3908	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	32.2666838842929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTTCATTTTGTCTT	132062548	False	NA	8	True	AATAAA	-14	NA	132062594	132080457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132062702_132064667_132064887_132066794_132066970_132067361_132067487_132069494_132069642_132076515_132076594_132077400
WTC11_00019244	chr12	+	2172	5	FSM	ENSG00000185684.16	ENST00000392352.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	16.8281757775464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTCTGTTAACTTT	132083013	False	NA	10	True	ATTAAA	-17	NA	132084479	132108899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132085317_132090848_132090944_132103996_132104171_132104566_132105305_132108571
WTC11_00019248	chr12	+	862	6	FSM	ENSG00000184967.7	ENST00000538784.2	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	33.4041913537807	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGGAGTGTGGACTGG	132150827	False	NA	12	True	AATAAA	-19	NA	132150840	132152473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
WTC11_00019251	chr12	+	3694	3	NIC	ENSG00000112787.14	novel	4839	19	NA	NA	0	-2	combination_of_known_junctions	TRUE	canonical	3	86	junction_2	5.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATCAGCGTTTGTAATT	132487364	True	NA	30	True	AATAAA	-27	NA	132490150	132511950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132490862_132508152_132508351_132509165
WTC11_00019252	chr12	+	4835	19	FSM	ENSG00000112787.14	ENST00000680143.1	4839	19	1	3	1	-3	multi-exon	FALSE	canonical	3	17	junction_2	107.303250902855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGGTCGCGTGTTCT	132487365	True	NA	11	True	GATAAA	-20	NA	132490151	132585185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132490862_132508152_132508351_132525733_132525824_132527952_132527989_132548002_132548033_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00019260	chr12	+	632	3	FSM	ENSG00000176894.10	ENST00000543589.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	76	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686473	True	NA	9	True	AATAAA	-21	NA	132687641	132704985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132687793_132690262_132690377_132704618
WTC11_00019264	chr12	+	2834	6	FSM	ENSG00000247077.7	ENST00000498926.7	2811	6	-23	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	53.3576611181562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698944	True	NA	16	True	AATAAA	-25	NA	132710818	132722734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677
WTC11_00019276	chr12	+	7184	5	FSM	ENSG00000198040.11	ENST00000327668.11	7162	5	-22	0	-22	0	multi-exon	TRUE	canonical	1	3	junction_1	76.1019053637949	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCAAGTTGTGTT	133037468	False	NA	14	True	AATAAA	-16	NA	133037557	133063297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037970_133041277_133041483_133047954_133048082_133048752_133048849_133056953
WTC11_00019285	chr12	+	526	4	FSM	ENSG00000256223.6	ENST00000538918.5	546	4	20	0	7	0	multi-exon	FALSE	canonical	3	22	junction_1	8.17856276425687	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAACTATAAGAACCT	133129658	True	NA	NA	False	NA	NA	NA	133130594	133151123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027
WTC11_00019288	chr12	+	2016	3	FSM	ENSG00000256223.6	ENST00000537119.2	711	3	-286	-1019	-286	0	multi-exon	FALSE	canonical	3	45	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	NA	False	NA	-16	True	NA	NA	NA	133150700	133156968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133151155_133151808_133151905_133155502
WTC11_00019293	chr12	+	6490	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	-2717	0	2717	multi-exon	FALSE	canonical	3	53	junction_5	23.0753596336487	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTATATGCTGATAAATCA	133179279	True	NA	NA	False	GATAAA	-18	NA	133181558	133207890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
WTC11_00019294	chr12	-	1871	11	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	242	6	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_10	52.4122123173598	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGCTTTTAATAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	31773	14515	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_26800_26955_31587
WTC11_00019295	chr12	-	425	4	FSM	ENSG00000111181.13	ENST00000540094.1	557	4	0	132	0	-132	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTATGTACCGTGCT	-202799	False	NA	NA	False	NA	NA	NA	202814	198802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_198932_200650_200784_201761_201850_202739
WTC11_00019296	chr12	-	3327	1	FSM	ENSG00000261799.1	ENST00000570140.1	3170	1	-42	-115	-42	115	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTACATCTTGAATTGA	-277154	False	NA	18	True	ATTAAA	-3	NA	277165	273838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_273800_277200
WTC11_00019297	chr12	-	11034	30	NNC	ENSG00000073614.13	novel	10701	28	NA	NA	-71	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6872326540507	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTACGTCCCGTAAAG	-389010	False	NA	NA	False	AAAAAG	-27	NA	389391	279818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_281970_282027_285663_286125_286208_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
WTC11_00019298	chr12	-	10701	28	FSM	ENSG00000073614.13	ENST00000399788.7	10701	28	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_24	8.79549703971202	5587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTTCCATGAAATTT	-388939	False	NA	63	True	AAGAAA	-19	NA	389320	280056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
WTC11_00019299	chr12	-	670	2	FSM	ENSG00000073614.13	ENST00000544777.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAATGAGTCATATCAT	-334314	True	NA	NA	False	NA	NA	NA	334328	333067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_333650_334240
WTC11_00019301	chr12	-	945	2	FSM	ENSG00000171840.13	ENST00000433832.2	945	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCTCAACAACGCAGCC	-643626	True	NA	NA	False	NA	NA	NA	643636	565359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_566179_643510
WTC11_00019302	chr12	-	3023	12	FSM	ENSG00000002016.18	ENST00000358495.8	3023	12	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	7.1072073766153	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTAATAATTTTTTTA	-948707	True	NA	NA	False	AGTAAA	-38	NA	949694	911735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_913453_913893_914122_914430_914533_916343_916484_916638_916821_925449_925526_927144_927264_929818_929887_930050_930145_931219_931322_932974_933077_949601
WTC11_00019303	chr12	-	808	4	FSM	ENSG00000002016.18	ENST00000535376.5	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	9.41629792788369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTAGAGCTGAGCAC	NA	False	NA	NA	False	NA	NA	NA	916582	913233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_913453_913893_914122_914410_914533_916343
WTC11_00019304	chr12	-	399	2	FSM	ENSG00000002016.18	ENST00000542297.1	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGGGACTTTGGAAAAC	NA	False	NA	NA	False	NA	NA	NA	914198	913358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_913453_913893
WTC11_00019308	chr12	-	2189	1	NIC	ENSG00000171823.7	novel	2527	2	NA	NA	-207	-3696	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTATGTAAGTCACAG	-1592942	False	NA	-18	True	AAGAAA	-31	NA	1593245	1591056	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_1591100_1593200
WTC11_00019309	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	23.5687160235767	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-2000712	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
WTC11_00019310	chr12	-	2073	10	FSM	ENSG00000151065.14	ENST00000543381.5	2073	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	90.7364927199146	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCATGTTGAGTGTT	-2000725	True	NA	-102	True	TTTAAA	-38	NA	2004470	1946151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1991120_1991247_1993263_1993392_1997934_1997976_2004281
WTC11_00019311	chr12	-	598	6	FSM	ENSG00000151065.14	ENST00000537725.1	598	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	90.5560599849618	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTACAGGAACCCTT	-2000682	True	NA	NA	False	NA	NA	NA	2004427	1961315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1961396_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
WTC11_00019312	chr12	-	2218	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	13	0	-13	multi-exon	FALSE	canonical	3	244	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTAATTTCACTTGCTT	-2000790	True	NA	NA	False	AATAAA	-5	NA	2004535	1991468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1993392_1997934_1997976_2004281
WTC11_00019313	chr12	-	3480	10	FSM	ENSG00000111206.13	ENST00000342628.6	3475	10	0	-5	0	2	multi-exon	FALSE	canonical	3	28	junction_1	137.983896000785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTGGTTTATTGGCG	-2876974	False	NA	-3	True	AATAAA	-20	NA	2876986	2857677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2861298_2861413_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
WTC11_00019314	chr12	-	3375	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	-5	0	2	multi-exon	FALSE	canonical	3	223	junction_6	47.8014601433548	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTGGTTTATTGGCG	-2871976	True	NA	-3	True	AATAAA	-20	NA	2877040	2857677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
WTC11_00019315	chr12	-	3490	8	FSM	ENSG00000111206.13	ENST00000627656.2	3487	8	0	-3	0	2	multi-exon	FALSE	canonical	3	33	junction_3	111.581762828512	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTGGTTTATTGGCG	-2872091	True	NA	-3	True	AATAAA	-20	NA	2877155	2857677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864756_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
WTC11_00019316	chr12	-	3554	9	FSM	ENSG00000111206.13	ENST00000359843.8	3552	9	0	-2	0	2	multi-exon	FALSE	canonical	3	29	junction_3	124.211450257213	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTGGTTTATTGGCG	-2877162	False	NA	-3	True	AATAAA	-20	NA	2877174	2857677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
WTC11_00019322	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	-3211907	False	NA	NA	False	NA	NA	NA	3211917	3211662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3211700_3211900
WTC11_00019323	chr12	-	1168	1	FSM	ENSG00000280202.1	ENST00000624384.1	1697	1	558	-29	558	29	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTCTTCATGTTGA	NA	False	NA	NA	False	NA	NA	NA	3611445	3610277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3610300_3611400
WTC11_00019324	chr12	-	648	5	FSM	ENSG00000130038.10	ENST00000535292.1	630	5	0	-18	0	18	multi-exon	FALSE	canonical	3	8	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGGTCCTGTGCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	3654223	3640368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3640780_3641731_3641839_3644594_3644641_3648541_3648614_3654211
WTC11_00019326	chr12	-	4406	8	FSM	ENSG00000111224.14	ENST00000427057.6	4406	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	19.5301964001536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871978	True	NA	-22	True	ATTAAA	-18	NA	3873355	3808860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
WTC11_00019327	chr12	-	4439	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	10	0	10	0	multi-exon	FALSE	canonical	3	34	junction_7	21.263171188221	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3872012	True	NA	-22	True	ATTAAA	-18	NA	3873389	3808860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
WTC11_00019328	chr12	-	4328	7	FSM	ENSG00000111224.14	ENST00000458162.6	4299	7	-29	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	23.7814119756493	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3872022	True	NA	-22	True	ATTAAA	-18	NA	3873399	3808860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
WTC11_00019330	chr12	-	621	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	-4276227	True	NA	-6	True	AATAAA	-15	NA	4276252	4248766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4249194_4276058
WTC11_00019331	chr12	-	3822	14	FSM	ENSG00000047621.12	ENST00000261250.8	3817	14	0	-5	0	5	multi-exon	FALSE	canonical	3	49	junction_4	11.9034578040294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTACATGGCATTT	-4537535	True	NA	NA	False	AATAAA	-22	NA	4538469	4487729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536220_4538408
WTC11_00019332	chr12	-	574	3	FSM	ENSG00000047621.12	ENST00000509318.2	574	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTCAGAAATCCATGT	-4509236	True	NA	NA	False	NA	NA	NA	4509350	4500314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4500341_4505305_4505381_4508877
WTC11_00019335	chr12	-	2171	10	FSM	ENSG00000067182.8	ENST00000162749.7	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	18.4096056515862	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	-6338998	True	NA	-13	True	ACTAAA	-15	NA	6342076	6328770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
WTC11_00019339	chr12	-	3445	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	76.1345665399247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGGAGAGCTGGATGG	-6365403	True	NA	1	True	AATAAA	-19	NA	6375379	6346843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375027
WTC11_00019340	chr12	-	4290	12	FSM	ENSG00000111319.13	ENST00000360168.7	3481	12	11	-820	0	820	multi-exon	TRUE	canonical	3	250	junction_10	27.2966561691451	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACCTGAAACGGTGTGA	-6375202	False	NA	NA	False	NA	NA	NA	6375213	6346022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
WTC11_00019341	chr12	-	3948	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	-178	0	intron_retention	FALSE	canonical	3	32	junction_12	73.8031823312669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGAGCTGGATGGG	-6375727	True	NA	2	True	AATAAA	-20	NA	6376206	6346842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375352
WTC11_00019342	chr12	-	3154	13	FSM	ENSG00000111319.13	ENST00000228916.7	3149	13	0	-5	0	1	multi-exon	FALSE	canonical	3	55	junction_12	67.8955488640865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGCTGGATGGGG	-6365587	True	NA	3	True	AATAAA	-21	NA	6375563	6346841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375504
WTC11_00019349	chr12	-	440	1	FSM	ENSG00000213942.3	ENST00000498412.1	377	1	-14	-49	-14	49	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGGAATTACCCAAACT	NA	False	NA	NA	False	AATAAA	-22	NA	6410027	6409587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6409600_6410000
WTC11_00019350	chr12	-	670	4	NNC	ENSG00000111639.8	novel	898	3	NA	NA	0	70090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1269.82527231987	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGGTGTAGTGGCAGG	-6480877	True	NA	NA	False	NA	NA	NA	6493262	6421795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492149_6492468_6492861_6492973_6493057
WTC11_00019351	chr12	-	702	4	NNC	ENSG00000111639.8	novel	898	3	NA	NA	0	70090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1269.82527231987	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGGTGTAGTGGCAGG	-6480910	True	NA	NA	False	NA	NA	NA	6493295	6421795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492150_6492468_6492861_6492973_6493057
WTC11_00019352	chr12	-	439	2	FSM	ENSG00000215039.8	ENST00000447687.2	467	2	28	0	28	0	multi-exon	FALSE	canonical	3	45	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGGGAACATCACACA	-6448367	False	NA	NA	False	NA	NA	NA	6448757	6447829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6448151_6448639
WTC11_00019353	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.48528137423857	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00019354	chr12	-	747	5	FSM	ENSG00000139190.17	ENST00000535180.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.2142525225417	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCCCAGCCCTATC	-6469859	True	NA	NA	False	NA	NA	NA	6470645	6462676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6462970_6464889_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00019355	chr12	-	912	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	-14	0	14	multi-exon	FALSE	canonical	3	2501	junction_2	175.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAAATATTTATTAGGC	-6480877	True	NA	14	True	AATATA	-34	NA	6493262	6491871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493057
WTC11_00019356	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1426	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-6490614	True	NA	17	True	NA	NA	NA	6493841	6492102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493716
WTC11_00019357	chr12	-	824	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	-10	0	10	multi-exon	FALSE	canonical	3	226	junction_2	1313	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGTTTTCCTCTAGA	-6490613	True	NA	-17	True	AATAAA	-31	NA	6493840	6492136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493458
WTC11_00019358	chr12	-	473	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	-1	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1370	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATAGCCACATACTTT	-6493695	False	NA	-31	True	AATAAA	-17	NA	6493718	6492150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493673
WTC11_00019359	chr12	-	422	2	FSM	ENSG00000269968.1	ENST00000602946.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCCACCACTGACACGT	NA	False	NA	NA	False	NA	NA	NA	6538370	6537793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6537986_6538140
WTC11_00019362	chr12	-	2686	10	FSM	ENSG00000010295.20	ENST00000336604.8	2686	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.6037207283628	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-6555528	True	NA	-1	True	AATGAA	-23	NA	6556071	6539527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6540589_6541511_6541643_6548064_6548158_6548424_6548546_6548667_6548826_6549475_6549485_6549755_6549897_6550694_6550791_6550940_6551002_6555256
WTC11_00019363	chr12	-	2677	9	FSM	ENSG00000010295.20	ENST00000396840.6	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.4266319178434	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-6555528	True	NA	-1	True	AATGAA	-23	NA	6556071	6539527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6540589_6541511_6541643_6548064_6548158_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
WTC11_00019364	chr12	-	2786	10	FSM	ENSG00000010295.20	ENST00000487279.6	2786	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	25.660172338557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-6555528	True	NA	-1	True	AATGAA	-23	NA	6556071	6539527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
WTC11_00019366	chr12	-	2668	9	NIC	ENSG00000010295.20	novel	2680	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	17.4266319178434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6555527	True	NA	-12	True	AATGAA	-12	NA	6556070	6539538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
WTC11_00019369	chr12	-	2651	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	91.9681104151506	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTATTTTTGAGGG	-6558503	True	NA	-1	True	AATACA	-18	NA	6568291	6556869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
WTC11_00019370	chr12	-	2727	16	NIC	ENSG00000111641.12	novel	2701	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	119.897437652168	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	-6558526	True	NA	-4	True	AATACA	-15	NA	6568314	6556872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
WTC11_00019378	chr12	-	670	4	FSM	ENSG00000111641.12	ENST00000540228.1	668	4	0	-2	0	0	multi-exon	FALSE	canonical	3	132	junction_3	135.072819866421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-6558509	True	NA	NA	False	NA	NA	NA	6568297	6566259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568138
WTC11_00019379	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	25.3026129524645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-6558537	True	NA	NA	False	NA	NA	NA	6568325	6566259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
WTC11_00019381	chr12	-	6439	40	FSM	ENSG00000111642.16	ENST00000357008.7	6438	40	0	-1	0	1	multi-exon	TRUE	canonical	0	0	junction_2	244.94957282702	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGGTTCAGTGTGGGT	-6596259	True	NA	-6	True	AATAAA	-19	NA	6607356	6570080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573070_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581037_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299
WTC11_00019382	chr12	-	6492	40	FSM	ENSG00000111642.16	ENST00000544040.7	6491	40	0	-1	0	1	multi-exon	FALSE	canonical	3	83	junction_37	222.882951329673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGGTTCAGTGTGGGT	-6596282	True	NA	-6	True	AATAAA	-19	NA	6607379	6570080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299
WTC11_00019383	chr12	-	6605	40	FSM	ENSG00000111642.16	ENST00000645022.1	6673	40	68	0	-62	0	multi-exon	FALSE	canonical	3	155	junction_37	219.506990479039	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	-6607501	False	NA	-7	True	AATAAA	-18	NA	6607514	6570081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
WTC11_00019389	chr12	-	6163	39	FSM	ENSG00000111642.16	ENST00000642594.1	6142	39	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_2	227.610058307315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	-6606307	False	308	-32	True	NA	NA	NA	6606320	6570180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573070_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273
WTC11_00019390	chr12	-	6319	38	FSM	ENSG00000111642.16	ENST00000642879.1	6309	38	0	-10	0	0	multi-exon	FALSE	canonical	3	105	junction_31	221.895137744966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	-6606421	False	11097	-32	True	NA	NA	NA	6606434	6570180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273
WTC11_00019392	chr12	-	6366	40	FSM	ENSG00000111642.16	ENST00000646806.1	6359	40	0	-7	0	0	multi-exon	FALSE	canonical	3	105	junction_32	223.802095702347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	-6596316	True	NA	-32	True	NA	NA	NA	6607413	6570180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
WTC11_00019401	chr12	-	2634	2	FSM	ENSG00000184574.10	ENST00000329858.9	2683	2	0	49	0	-49	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGGGAGAGGGCAGT	-6635930	True	NA	NA	False	NA	NA	NA	6635959	6618883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6621465_6635906
WTC11_00019402	chr12	-	1628	8	FSM	ENSG00000111653.20	ENST00000341550.9	1659	8	0	31	0	-31	multi-exon	FALSE	canonical	3	77	junction_4	28.8981321336921	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCCAATAAATGATGTA	-6659851	True	NA	-51	True	CATAAA	-14	NA	6663119	6650331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
WTC11_00019403	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	58.4306331378404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-6659874	True	NA	28	True	AGTAAA	-15	NA	6663142	6650538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
WTC11_00019404	chr12	-	1393	8	FSM	ENSG00000111653.20	ENST00000396807.8	1393	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	36.8837113542727	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-6659872	True	NA	-24	True	AATAAA	-15	NA	6663140	6650590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
WTC11_00019405	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.5879974377449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-6659874	True	NA	-59	True	NA	NA	NA	6663142	6650625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
WTC11_00019409	chr12	-	3407	12	FSM	ENSG00000126746.18	ENST00000683879.1	3407	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	101.779700520372	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6687700	True	NA	-2	True	AATAAA	-15	NA	6689375	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
WTC11_00019410	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	69.8872107200039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6689499	False	NA	-2	True	AATAAA	-15	NA	6689510	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
WTC11_00019411	chr12	-	3231	11	FSM	ENSG00000126746.18	ENST00000361959.7	2978	11	0	-253	0	0	multi-exon	FALSE	canonical	3	41	junction_10	87.335216264689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6689281	False	NA	-2	True	AATAAA	-15	NA	6689292	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
WTC11_00019412	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	84.5917253636548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-6689499	False	NA	77	True	NA	NA	NA	6689510	6666647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
WTC11_00019413	chr12	-	3182	10	NIC	ENSG00000126746.18	novel	2978	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	74.8184634240493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6689281	False	NA	-13	True	TATAAA	-18	NA	6689292	6666737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688702
WTC11_00019415	chr12	-	2884	9	NIC	ENSG00000126746.18	novel	3266	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	93.2962351866355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6687771	True	NA	-2	True	AATAAA	-15	NA	6689446	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678945_6679184_6679454_6679526_6688166_6688227_6689367
WTC11_00019416	chr12	-	2940	10	NIC	ENSG00000126746.18	novel	3266	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_9	65.3051715570732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6687779	True	NA	-2	True	AATAAA	-15	NA	6689454	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
WTC11_00019427	chr12	-	2433	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	-109	-1	-94	0	multi-exon	FALSE	canonical	3	22	junction_1	16.5698521417664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	NA	False	NA	-6	True	AATAAA	-15	NA	6700909	6693790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
WTC11_00019428	chr12	-	2745	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	-39	5	-39	-4	multi-exon	FALSE	canonical	3	50	junction_1	8.10478253872366	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTCGAGTCCCCTGGT	NA	False	NA	-11	True	AATAAA	-10	NA	6700854	6693795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
WTC11_00019430	chr12	-	1558	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6717875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717903_6747995_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00019431	chr12	-	1563	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6717875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717903_6747990_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00019432	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_5	303.317387401382	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-6732693	True	NA	-10	True	AATAAA	-18	NA	6753141	6747995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00019433	chr12	-	564	3	FSM	ENSG00000089693.11	ENST00000541305.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	2996	junction_1	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAAGGCAGGCTCAGTT	-6750284	False	NA	NA	False	NA	NA	NA	6750318	6748720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6748983_6749847_6750008_6750176
WTC11_00019435	chr12	-	1250	6	FSM	ENSG00000089693.11	ENST00000541346.1	1234	6	0	-16	0	16	multi-exon	FALSE	canonical	3	2813	junction_2	323.817850033009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCAAAGCTCTGGGTCA	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6749770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6750008_6750176_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00019436	chr12	-	2760	3	FSM	ENSG00000111665.12	ENST00000603043.1	1995	3	0	-765	0	699	multi-exon	FALSE	canonical	3	30	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTAAGAAAGGGCTAGG	-6848322	False	NA	NA	False	NA	NA	NA	6848367	6844093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846368_6846724_6846904_6848060
WTC11_00019437	chr12	-	2923	2	FSM	ENSG00000111665.12	ENST00000604599.1	2917	2	0	-6	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTGTGTGTGTAT	-6848827	False	NA	-6	True	AAGAAA	-19	NA	6848872	6844792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846904_6848060
WTC11_00019438	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	141.433235132341	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843957	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
WTC11_00019439	chr12	-	1156	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	-12	0	0	multi-exon	FALSE	canonical	3	345	junction_5	20.1395134002786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843991	True	NA	-2	True	AAAAAG	-16	NA	6851286	6848815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
WTC11_00019440	chr12	-	1340	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	-13	0	0	multi-exon	FALSE	canonical	3	358	junction_2	17.6546736021938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843963	True	NA	-2	True	AAAAAG	-16	NA	6851258	6848815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
WTC11_00019441	chr12	-	1503	4	FSM	ENSG00000111665.12	ENST00000536241.1	1490	4	0	-13	0	0	multi-exon	FALSE	canonical	3	345	junction_3	14.6969384566991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843967	True	NA	-2	True	AAAAAG	-16	NA	6851262	6848815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849859_6850466_6851010_6851221
WTC11_00019442	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	149.244765402342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	-6843954	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
WTC11_00019443	chr12	-	619	4	FSM	ENSG00000111665.12	ENST00000545368.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	168.530907155532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCACTTTCCCTTG	-6843997	True	NA	NA	False	NA	NA	NA	6851292	6849074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6851221
WTC11_00019446	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	51	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6872015	True	NA	-5	True	AGTAAA	-27	NA	6873303	6870934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6871320_6872237_6872998_6873245
WTC11_00019447	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	43	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6871997	True	NA	-5	True	AGTAAA	-27	NA	6873285	6870934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6871320_6872237_6872987_6873214
WTC11_00019448	chr12	-	1496	2	FSM	ENSG00000111671.10	ENST00000519357.1	1496	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCAAAGCCTGGGCCAGC	-6872048	True	NA	NA	False	NA	NA	NA	6873336	6871592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6872998_6873245
WTC11_00019449	chr12	-	1367	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	2932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTAAATAAAGCCTCTC	-6940478	True	NA	NA	False	AAAACA	-4	NA	6970645	6913550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913583_6965351_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00019450	chr12	-	1366	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTAAATAAAGCCTCTC	-6940478	True	NA	NA	False	AAAACA	-4	NA	6970645	6913550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913585_6965354_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00019451	chr12	-	1366	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTAAATAAAGCCTCTC	-6940483	True	NA	NA	False	AAAACA	-4	NA	6970650	6913550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913583_6965351_6965713_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00019452	chr12	-	1422	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTAAATAAAGCCTCTC	-6940535	True	NA	NA	False	AAAACA	-4	NA	6970702	6913550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913584_6965354_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00019453	chr12	-	1612	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	-422	-93	-422	93	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTTCTCAAACTGTAG	NA	False	NA	NA	False	NA	NA	NA	6945026	6943414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6943400_6945000
WTC11_00019455	chr12	-	1391	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	702.728850079954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970708	False	NA	-3	True	AATAAA	-21	NA	6970724	6965351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00019456	chr12	-	858	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	736.333861475592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970735	False	NA	-3	True	AATAAA	-21	NA	6970751	6965351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
WTC11_00019459	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_4	52.9897133623331	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	-7008809	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
WTC11_00019460	chr12	-	2903	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	-1	0	0	multi-exon	FALSE	canonical	3	556	junction_6	50.0795367390714	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	-7008810	True	NA	-8	True	GATAAA	-27	NA	7018477	6976184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
WTC11_00019461	chr12	-	974	8	FSM	ENSG00000111684.11	ENST00000540090.5	974	8	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_7	206.150727500486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTGCTTCCAGATGG	-7008807	True	NA	NA	False	NA	NA	NA	7018474	6977646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_7018273
WTC11_00019467	chr12	-	2437	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	-31	-525	-31	-2	multi-exon	FALSE	canonical	3	18	junction_9	12.5560471880148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAATGAGTCAAAAGTT	-7090357	False	466	-9	True	AATAAA	-22	NA	7090823	7080215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
WTC11_00019468	chr12	-	2586	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	-95	-3	0	-2	multi-exon	FALSE	canonical	3	19	junction_10	12.9011627382961	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAATGAGTCAAAAGTT	-7092074	True	NA	-9	True	AATAAA	-22	NA	7092540	7080215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
WTC11_00019469	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.96386945839634	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	-7108480	True	NA	-3	True	AATATA	-13	NA	7109214	7094553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
WTC11_00019470	chr12	-	530	2	FSM	ENSG00000139178.12	ENST00000543941.1	539	2	9	0	9	0	multi-exon	FALSE	canonical	3	15	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGAGTGTCCCTCCTGGG	-7107858	False	NA	NA	False	NA	NA	NA	7108592	7101899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7102088_7108250
WTC11_00019471	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	-7108394	False	NA	NA	False	NA	NA	NA	7109128	7108144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7108480_7109109
WTC11_00019472	chr12	-	928	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	34	-5	7	5	multi-exon	FALSE	canonical	1	3	junction_3	2.44948974278318	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCCATTTCTTTGTC	-7128778	False	77	-9	True	TTTAAA	-21	NA	7128855	7123680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
WTC11_00019473	chr12	-	1238	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	-2	0	2	multi-exon	FALSE	canonical	3	460	junction_1	0	1917	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTGTTTATAATTTGT	-7689619	True	NA	17	True	AATAAA	-44	NA	7695775	7689781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7690705_7695460
WTC11_00019474	chr12	-	3118	8	FSM	ENSG00000173262.12	ENST00000542546.5	3120	8	2	0	2	0	multi-exon	FALSE	canonical	1	3	junction_7	276.163438742277	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAGCACATTATTTAT	NA	False	NA	-4	True	AATAAA	-20	NA	7832814	7812512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7832721
WTC11_00019475	chr12	-	3366	10	FSM	ENSG00000173262.12	ENST00000616981.4	3366	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	245.947349580011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAGCACATTATTTAT	-7863281	False	NA	-4	True	AATAAA	-20	NA	7863455	7812512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7863368
WTC11_00019476	chr12	-	3433	11	FSM	ENSG00000173262.12	ENST00000431042.7	3462	11	0	29	0	-29	multi-exon	FALSE	canonical	2	2	junction_10	235.516984525533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAATAAAAATTCTGAA	-7872741	False	NA	-34	True	NA	NA	NA	7872915	7812542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7869862_7869938_7872806
WTC11_00019477	chr12	-	2249	10	NIC	ENSG00000173262.12	novel	2335	12	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	250.076926436252	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATCTTTAAGATAATA	-7872758	False	NA	-14	True	AATAAA	-20	NA	7872932	7813529	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7832721_7832815_7869862_7869938_7872859
WTC11_00019478	chr12	-	2228	12	FSM	ENSG00000173262.12	ENST00000396589.6	2335	12	107	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_11	227.852206702445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAATTTTGCCAAATAA	-7872758	False	NA	NA	False	CATAAA	-14	NA	7872932	7813800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7863368_7863458_7869862_7869938_7872859
WTC11_00019481	chr12	-	459	1	FSM	ENSG00000255356.2	ENST00000533382.2	349	1	51	-161	51	161	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGAGAGGTTTCTTTC	-7896849	False	NA	NA	False	NA	NA	NA	7896905	7896446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7896400_7896900
WTC11_00019482	chr12	-	3829	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	-2	0	2	multi-exon	FALSE	canonical	3	2864	junction_5	185.662444263444	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGCTTATTTACTTTT	-7899769	True	NA	-10	True	AATAAA	-21	NA	7936187	7919227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
WTC11_00019483	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_6	179.343943304479	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	-7899749	True	NA	-13	True	AATAAA	-18	NA	7936167	7919230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
WTC11_00019484	chr12	-	943	2	FSM	ENSG00000059804.16	ENST00000490763.1	943	2	0	0	0	0	multi-exon	FALSE	canonical	3	2970	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGCCAGTCACAAGCT	-7929878	False	NA	NA	False	NA	NA	NA	7930035	7925357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7925949_7929683
WTC11_00019486	chr12	-	217	1	FSM	ENSG00000255581.1	ENST00000388966.4	660	1	56	387	56	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTGGTGCATTCCAG	-8017781	False	NA	NA	False	NA	NA	NA	8017804	8017587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8017600_8017800
WTC11_00019487	chr12	-	939	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	582	262	582	-262	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCATTGAAAGAGATCC	-8081492	False	NA	NA	False	ACTAAA	-4	NA	8081581	8080642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8080600_8081600
WTC11_00019488	chr12	-	1263	1	FSM	ENSG00000235602.5	ENST00000428824.4	1078	1	36	-221	36	221	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAATAAAGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	8134813	8133550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8133600_8134800
WTC11_00019489	chr12	-	651	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	11	0	-11	multi-exon	FALSE	canonical	3	14	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATCAAACTCTTGGCT	-8389875	False	NA	-11	True	TATAAA	-12	NA	8390752	8356973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8357142_8390269
WTC11_00019491	chr12	-	219	1	FSM	ENSG00000284673.1	ENST00000642101.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	-8395764	False	NA	NA	False	NA	NA	NA	8396641	8396422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8396400_8396600
WTC11_00019492	chr12	-	4049	2	Antisense	novelGene_ENSG00000249790.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	57	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGGGCTGCAGGTCCGG	-8799011	False	NA	NA	False	NA	NA	NA	8799042	8787534	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_8788074_8795532
WTC11_00019493	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_1	40.0444197804832	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	-8936371	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
WTC11_00019494	chr12	-	1396	5	FSM	ENSG00000003056.8	ENST00000536844.5	2305	5	-229	1138	-229	147	multi-exon	FALSE	canonical	1	24	junction_1	357.563543303844	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCGTTTGTTTTTTAAA	NA	False	NA	-92	True	NA	NA	NA	8949990	8941501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8941941_8943800_8943911_8945417_8945585_8946228_8946406_8949487
WTC11_00019495	chr12	-	581	3	FSM	ENSG00000003056.8	ENST00000537621.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	47.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATCTGATTTAGCTTT	-8943781	False	76	NA	False	NA	NA	NA	8943886	8942178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8942543_8943404_8943536_8943800
WTC11_00019496	chr12	-	412	3	FSM	ENSG00000003056.8	ENST00000543834.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_2	50.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGGGATAACTTTTTA	-8945374	False	76	NA	False	NA	NA	NA	8945479	8943295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8943536_8943800_8943911_8945417
WTC11_00019498	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-8936336	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8945585_8946228_8946406_8949487
WTC11_00019500	chr12	-	265	1	FSM	ENSG00000283429.1	ENST00000635744.1	85	1	-7	-173	-7	173	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCTGATGAAAATCACT	-9239488	False	NA	NA	False	AAAAAG	-19	NA	9239558	9239293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_9239300_9239600
WTC11_00019502	chr12	-	4028	27	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	-75	969	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	69.5036076710406	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTGATATGTGCTG	-9448246	False	NA	NA	False	ATTAAA	-25	NA	9448304	9417703	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418700_9418774_9418930_9419111_9419191_9419488_9419574_9419980_9420082_9420172_9420256_9420514_9420665_9421387_9421492_9421817_9421891_9424527_9424641_9425470_9425603_9425715_9425825_9426081_9426121_9427632_9427701_9427820_9427866_9429131_9429212_9429559_9429607_9430587_9430741_9432365_9432575_9432968_9433057_9433307_9433416_9434094_9434141_9436946_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447981
WTC11_00019503	chr12	-	684	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21314	-11	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	8	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCTTGAAGGAGTTA	-9910703	True	NA	-26	True	AATAAA	-7	NA	9911033	9898683	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9898977_9900827_9900876_9910690
WTC11_00019504	chr12	-	649	3	FSM	ENSG00000256288.1	ENST00000539009.1	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	0.5	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	-10337942	True	NA	-6	True	AATAAA	-20	NA	10338292	10332860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10333064_10336111_10336310_10338044
WTC11_00019505	chr12	-	540	2	ISM	ENSG00000256288.1	ENST00000539009.1	649	3	0	3157	0	-3157	5prime_fragment	FALSE	canonical	3	43	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTGATGGCCAGGCTT	-10337942	True	NA	NA	False	NA	NA	NA	10338292	10336017	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_10336310_10338044
WTC11_00019506	chr12	-	6050	9	NNC	ENSG00000256667.6	novel	2353	7	NA	NA	-3651	28351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.2687443783725	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAATCTGGGTCCAAACA	-10603306	False	NA	NA	False	AAAAAG	-32	NA	10603320	10559711	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10559743_10588064_10589056_10589142_10589546_10592279_10592387_10593780_10594006_10595690_10595928_10596891_10596982_10598042_10598210_10599521
WTC11_00019508	chr12	-	3306	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	-2249	0	429	multi-exon	FALSE	canonical	3	58	junction_2	349.563155953255	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGGTGAGTTCAGAAT	-10607543	True	NA	-15	True	AATAAA	-21	NA	10613594	10603763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
WTC11_00019509	chr12	-	3133	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	18	-545	0	545	multi-exon	FALSE	canonical	3	763	junction_2	10.4522724801834	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTGGAGAGAATACTAAT	-10607540	True	NA	NA	False	NA	NA	NA	10613591	10603647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
WTC11_00019513	chr12	-	1943	11	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	30549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.22624527579	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGTGACAGGTG	-10723293	False	NA	NA	False	AGTAAA	-33	NA	10723307	10668539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668566_10699086_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00019514	chr12	-	1910	10	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_3	1208.14091443664	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723291	False	NA	-30	True	AATAAA	-20	NA	10723305	10699088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10699655_10701253_10701354_10701959_10702132_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00019515	chr12	-	1703	9	NNC	ENSG00000060138.13	novel	1708	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_3	1624.15681489658	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723291	False	NA	-30	True	AATAAA	-20	NA	10723305	10699088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10699655_10701253_10701354_10701959_10702132_10704050_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00019516	chr12	-	1708	9	FSM	ENSG00000060138.13	ENST00000279550.11	1708	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	1224.02264582809	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723293	False	NA	-30	True	AATAAA	-20	NA	10723307	10699088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00019517	chr12	-	1931	10	FSM	ENSG00000060138.13	ENST00000228251.9	1931	10	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_3	474.501713951815	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723309	False	NA	-30	True	AATAAA	-20	NA	10723323	10699088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00019523	chr12	-	864	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	24.2239550858236	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCATGCAATTTCTGAT	NA	False	NA	-10	True	AATAAA	-6	NA	11171600	10845860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
WTC11_00019525	chr12	-	498	2	Fusion	ENSG00000255837.2_ENSG00000231887.8	novel	534	3	NA	NA	0	38	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTATATTTAAT	NA	False	NA	NA	False	AATATA	-37	NA	11047114	10995922	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_10996326_11047019
WTC11_00019526	chr12	-	1104	1	FSM	ENSG00000212124.2	ENST00000390673.2	1002	1	56	-158	56	158	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCATAAATTATGAAGCT	NA	False	NA	NA	False	NA	NA	NA	11022564	11021460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11021500_11022600
WTC11_00019527	chr12	-	534	3	FSM	ENSG00000231887.8	ENST00000546265.1	534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTAGACGTGTTTT	NA	False	NA	NA	False	AATAGA	-27	NA	11171608	11047012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11047189_11121009_11121181_11171421
WTC11_00019528	chr12	-	382	1	FSM	ENSG00000256981.1	ENST00000535136.1	910	1	-222	750	-222	-750	mono-exon	FALSE	NA	NA	NA	NA	NA	782	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATCATTCGACTGTAT	NA	False	NA	NA	False	NA	NA	NA	11159916	11159534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11159500_11159900
WTC11_00019529	chr12	-	8590	16	NNC	ENSG00000070018.9	novel	10252	23	NA	NA	-29721	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	37.8784019374278	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	-12164931	False	NA	NA	False	NA	NA	NA	12164949	12110419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110447_12116029_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
WTC11_00019530	chr12	-	10243	24	NNC	ENSG00000070018.9	novel	10252	23	NA	NA	0	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	32.2880466800347	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	-12260836	True	NA	NA	False	NA	NA	NA	12267012	12110419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110448_12116029_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
WTC11_00019531	chr12	-	7812	24	FSM	ENSG00000070018.9	ENST00000538239.5	7812	24	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	35.9486085609293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTGTCCTTTCTT	-12244269	False	NA	NA	False	AATAAA	-14	NA	12244304	12116028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12119331_12120369_12120404_12121085_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261
WTC11_00019532	chr12	-	10248	23	FSM	ENSG00000070018.9	ENST00000261349.9	10252	23	0	4	0	0	multi-exon	FALSE	canonical	3	88	junction_13	21.2805444067565	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTGTCCTTTCTT	-12260868	True	NA	NA	False	AATAAA	-14	NA	12267044	12116028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
WTC11_00019535	chr12	-	5522	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	10	0	-10	multi-exon	FALSE	canonical	3	50	junction_3	5.35412613473634	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTCAGTCGAGTATT	-12350056	True	NA	NA	False	AATAAA	-15	NA	12350242	12326065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
WTC11_00019536	chr12	-	6807	7	FSM	ENSG00000111266.9	ENST00000298573.9	6661	7	14	-160	14	160	multi-exon	FALSE	canonical	3	44	junction_6	12.0196598214019	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCATCCCAGCTACTTG	-12561875	True	NA	NA	False	AATACA	-22	NA	12562849	12473121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12500518_12500683_12519861_12520001_12520870_12521464_12562116
WTC11_00019537	chr12	-	3402	6	FSM	ENSG00000111266.9	ENST00000228862.3	3402	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	25.5076459125494	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATGTGAATTTATT	-12562340	False	NA	-5	True	AATAAA	-16	NA	12562383	12475896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12519861_12520001_12520870_12521464_12562116
WTC11_00019538	chr12	-	566	2	FSM	ENSG00000111266.9	ENST00000539940.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGCTAATTGATAGCCG	-12561082	False	685	NA	False	NA	NA	NA	12561125	12521023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12521464_12560999
WTC11_00019539	chr12	-	585	3	FSM	ENSG00000111266.9	ENST00000541207.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAAATTGTTACTGA	-12561034	False	NA	NA	False	NA	NA	NA	12561077	12521080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12521464_12554535_12554660_12560999
WTC11_00019540	chr12	-	2009	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	-149	-109	-149	108	multi-exon	FALSE	canonical	3	125	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGAGATTTATATTTC	NA	False	NA	NA	False	AATGAA	-16	NA	12684670	12660781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12662471_12684350
WTC11_00019541	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	2.35702260395516	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-12995043	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
WTC11_00019543	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_9	42.4807015007992	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	-14567868	False	NA	-9	True	AATAAA	-23	NA	14567883	14503660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
WTC11_00019544	chr12	-	857	6	FSM	ENSG00000121316.11	ENST00000541618.1	857	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	171.421585571946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGACCCTGCAGAATA	-14567713	False	NA	NA	False	AATACA	-7	NA	14567728	14511510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14567581
WTC11_00019545	chr12	-	3011	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	122	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-14710217	False	NA	-1	True	AATAAA	-24	NA	14710260	14705454	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14708216_14710010
WTC11_00019546	chr12	-	5170	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	-14710580	False	NA	0	True	AATAAA	-25	NA	14710623	14705453	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_14705500_14710600
WTC11_00019547	chr12	-	1277	1	FSM	ENSG00000197837.4	ENST00000539745.2	412	1	-83	-782	-83	782	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATGCCCATCACAAATAA	-14771053	False	NA	NA	False	NA	NA	NA	14771214	14769937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14769900_14771200
WTC11_00019548	chr12	-	2715	13	NNC	ENSG00000084463.8	novel	4581	12	NA	NA	0	5261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.873056744459	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCCAAGTTACTGCC	-14789367	True	NA	NA	False	NA	NA	NA	14803476	14779320	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14779353_14786477_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
WTC11_00019549	chr12	-	4586	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	-5	0	5	multi-exon	FALSE	canonical	3	1127	junction_1	64.8949564442479	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGTTATTTATAAGTAT	-14789369	True	NA	4	True	ATTAAA	-23	NA	14803478	14784576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
WTC11_00019550	chr12	-	370	4	FSM	ENSG00000084463.8	ENST00000544764.5	564	4	0	194	0	31	multi-exon	FALSE	canonical	3	1274	junction_3	28.003967972811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATTTACAAACAGGC	-14789377	True	NA	NA	False	AAAACA	-36	NA	14803486	14799634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14799729_14800751_14800784_14801319_14801429_14803351
WTC11_00019551	chr12	-	316	1	FSM	ENSG00000256283.1	ENST00000428182.2	611	1	222	73	222	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTTTAGATGAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	15255601	15255285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15255300_15255600
WTC11_00019552	chr12	-	3877	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	-4	0	0	multi-exon	FALSE	canonical	3	17	junction_12	5.9268457040824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCTGTCTCATTAGCA	-15788709	True	NA	-19	True	AATAAA	-25	NA	15789388	15620157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
WTC11_00019553	chr12	-	575	3	FSM	ENSG00000151491.14	ENST00000541465.1	581	3	6	0	6	0	multi-exon	FALSE	canonical	3	33	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAATCGCCATATAGA	NA	False	NA	NA	False	NA	NA	NA	15654424	15647149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15647261_15650822_15651007_15654144
WTC11_00019554	chr12	-	3054	1	FSM	ENSG00000256238.1	ENST00000537175.1	3133	1	-64	143	-64	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAAGGAAGAAGAAGAAC	NA	False	NA	NA	False	AAGAAA	-5	NA	16402470	16399416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16399400_16402500
WTC11_00019556	chr12	-	4644	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	-1023	-228	0	228	multi-exon	FALSE	canonical	3	73	junction_2	33.5062183283442	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCAATTGCTGGGTGTA	-16606689	True	NA	NA	False	AATAAA	-16	NA	16607185	16548143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
WTC11_00019559	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.4498759303938	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	-16606689	True	NA	NA	False	AATGAA	-23	NA	16607185	16551227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
WTC11_00019561	chr12	-	436	1	FSM	ENSG00000245205.3	ENST00000359165.5	1405	1	423	546	423	-546	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTCAACATTAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	19457225	19456789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19456800_19457200
WTC11_00019562	chr12	-	7665	16	FSM	ENSG00000084453.17	ENST00000307378.10	7682	16	9	8	9	-8	multi-exon	FALSE	canonical	1	1	junction_14	7.84743411709982	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTACATTGGCTTAAT	-21394984	True	NA	-34	True	AATAAA	-10	NA	21395428	21264607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21269768_21274468_21274587_21275359_21275425_21292163_21292337_21293944_21294111_21295596_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21334587_21334710_21374398_21374526_21394905
WTC11_00019563	chr12	-	3464	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	-892	0	0	multi-exon	FALSE	canonical	3	112	junction_15	58.3092902832244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496066	True	NA	-1	True	AATAAA	-23	NA	21501551	21468909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
WTC11_00019564	chr12	-	3415	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	79.3344766395636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496110	True	NA	2	True	AATAAA	-26	NA	21501595	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
WTC11_00019565	chr12	-	3443	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	81.0419370175439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496110	True	NA	2	True	AATAAA	-26	NA	21501595	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501480
WTC11_00019566	chr12	-	3748	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	-3	0	3	multi-exon	FALSE	canonical	3	233	junction_14	33.0316020606612	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496150	True	NA	2	True	AATAAA	-26	NA	21501635	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
WTC11_00019572	chr12	-	1283	9	NNC	ENSG00000111716.14	novel	1538	8	NA	NA	0	12851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3916.76463862395	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTGGGAAAACTGGCTA	-21507589	True	NA	NA	False	NA	NA	NA	21657794	21622490	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21622521_21635343_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
WTC11_00019573	chr12	-	1333	9	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	0	12852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3916.76463862395	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGGAAAACTGGCTAG	-21507637	True	NA	NA	False	NA	NA	NA	21657842	21622489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21622520_21635341_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
WTC11_00019574	chr12	-	1332	9	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	0	12851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3916.76463862395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTGGGAAAACTGGCTA	-21507637	True	NA	NA	False	NA	NA	NA	21657842	21622490	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21622521_21635342_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
WTC11_00019575	chr12	-	1586	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	-48	0	0	0	multi-exon	TRUE	canonical	3	202	junction_7	3998.15496223456	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507637	True	NA	-25	True	AATAAA	-19	NA	21657842	21635341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
WTC11_00019576	chr12	-	1303	8	FSM	ENSG00000111716.14	ENST00000350669.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	10475	junction_2	988.915629590806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507637	True	NA	-25	True	AATAAA	-19	NA	21657842	21635341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
WTC11_00019579	chr12	-	2063	2	FSM	ENSG00000121361.5	ENST00000657855.1	2154	2	91	0	91	0	multi-exon	FALSE	canonical	3	8	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTGAATATTTTATTAA	-21773622	False	NA	NA	False	NA	NA	NA	21773671	21764989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21766624_21773242
WTC11_00019580	chr12	-	4445	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	-9	0	9	multi-exon	FALSE	canonical	3	170	junction_24	28.3592712157574	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAATCTCTTTTTTACC	-22542439	True	NA	-4	True	AATAAA	-27	NA	22544546	22448573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
WTC11_00019581	chr12	-	4594	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	-9	0	9	multi-exon	FALSE	canonical	3	67	junction_4	52.0481826158173	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAATCTCTTTTTTACC	-22542435	True	NA	-4	True	AATAAA	-27	NA	22544542	22448573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
WTC11_00019582	chr12	-	3438	26	FSM	ENSG00000111731.13	ENST00000542676.5	3438	26	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	52.6653738237943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTAGACAGGCCCTG	-22544225	False	NA	NA	False	NA	NA	NA	22544253	22449580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060
WTC11_00019583	chr12	-	850	9	FSM	ENSG00000111731.13	ENST00000539615.1	850	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	81.2302860699136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCTACTACCAACTGCC	-22472286	False	NA	-57	True	NA	NA	NA	22472305	22449814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285
WTC11_00019584	chr12	-	567	2	FSM	ENSG00000111731.13	ENST00000543888.1	572	2	5	0	5	0	multi-exon	FALSE	canonical	3	82	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTTATAGAAGTTATT	NA	False	NA	NA	False	NA	NA	NA	22458859	22456970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22457162_22458483
WTC11_00019586	chr12	-	9298	12	NNC	ENSG00000060982.15	novel	1811	11	NA	NA	0	40615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	306.626242993913	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAGAAGAA	-24901883	True	NA	NA	False	AAAAAG	-8	NA	24903075	24769408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_24769440_24810024_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
WTC11_00019587	chr12	-	9286	12	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	0	40615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.07007352168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAGAAGAA	-24933055	True	NA	NA	False	AAAAAG	-8	NA	24949043	24769408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_24769440_24810024_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
WTC11_00019588	chr12	-	9618	11	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	-385	40615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332.493548809597	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-8	NA	24949486	24769408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_24769440_24810024_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
WTC11_00019589	chr12	-	8002	12	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	0	7671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.07007352168	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATATTTTATCTAT	-24933098	True	NA	NA	False	NA	NA	NA	24949086	24802352	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_24802395_24811362_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
WTC11_00019590	chr12	-	9316	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	-2	0	2	multi-exon	FALSE	canonical	3	720	junction_7	66.7769421282526	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGTTTGTATCCCA	-24933113	True	NA	-5	True	AATAAA	-18	NA	24949101	24810021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
WTC11_00019592	chr12	-	9270	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	-7459	0	2	multi-exon	FALSE	canonical	3	151	junction_10	219.4749188404	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGTTTGTATCCCA	-24901883	True	NA	-5	True	AATAAA	-18	NA	24903075	24810021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
WTC11_00019597	chr12	-	5308	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	-2	0	2	multi-exon	FALSE	canonical	3	509	junction_1	61.8885086264001	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGTATTTATTCATG	-25239383	True	NA	-3	True	AATAAA	-18	NA	25250929	25205243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
WTC11_00019598	chr12	-	5432	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	-2	0	2	multi-exon	FALSE	canonical	3	120	junction_2	249.625799948643	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGTATTTATTCATG	-25239383	True	NA	-3	True	AATAAA	-18	NA	25250929	25205243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
WTC11_00019599	chr12	-	421	1	FSM	ENSG00000278743.1	ENST00000622671.1	572	1	46	105	46	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCGTGGAAAATAAATCG	-25385602	True	NA	-56	True	ATTAAA	-4	NA	25386195	25385774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25385800_25386200
WTC11_00019600	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	13.2748718344933	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	-25958097	True	NA	NA	False	NA	NA	NA	25958541	25952448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
WTC11_00019601	chr12	-	3676	5	FSM	ENSG00000123095.6	ENST00000242728.5	3743	5	0	67	0	-67	multi-exon	FALSE	canonical	3	22	junction_2	1.92028643696715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTTTGTCTACCTGCT	-26124659	True	NA	NA	False	NA	NA	NA	26125037	26120096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26123169_26123629_26123742_26124071_26124180_26124518_26124583_26124717
WTC11_00019602	chr12	-	12567	57	FSM	ENSG00000123104.12	ENST00000381340.8	12564	57	0	-3	0	3	multi-exon	TRUE	canonical	3	19	junction_49	17.9305277817083	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTGCAATACTTTAA	-26830448	True	NA	-18	True	AATAAA	-19	NA	26833194	26335348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26339484_26340166_26340329_26387433_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26487067_26487252_26494152_26494341_26495151_26495261_26550246_26550356_26556232_26556376_26561761_26561953_26578712_26578834_26580026_26580156_26595464_26595591_26596882_26597135_26599144_26599346_26599986_26600110_26602369_26602496_26602616_26602707_26621122_26621297_26622239_26622406_26624298_26624357_26628032_26628163_26631865_26632060_26653975_26654127_26655707_26655853_26656296_26656549_26657706_26657893_26658010_26658131_26659112_26659286_26663684_26663847_26665909_26666052_26681873_26682035_26682573_26682674_26686480_26686633_26695605_26695651_26711172_26711269_26715298_26715446_26715751_26715836_26716143_26716243_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
WTC11_00019603	chr12	-	523	4	FSM	ENSG00000123104.12	ENST00000538984.1	586	4	0	63	0	-63	multi-exon	FALSE	canonical	3	46	junction_1	7.58653778449403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTATTTAGTAAATAT	-26427923	False	NA	NA	False	NA	NA	NA	26427937	26411275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26411413_26415302_26415499_26419048_26419214_26427912
WTC11_00019604	chr12	-	1256	6	FSM	ENSG00000123104.12	ENST00000242737.5	581	6	-397	-278	16	278	multi-exon	FALSE	canonical	2	3	junction_1	11.0706820024784	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTACAGGAGGTCCATGA	-26830432	True	NA	NA	False	NA	NA	NA	26833178	26721008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26721343_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
WTC11_00019606	chr12	-	2637	17	NNC	ENSG00000064102.15	novel	2634	17	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	111.261235387713	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933618	True	NA	-17	True	AATAAA	-27	NA	26937966	26905180	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917460_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
WTC11_00019607	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	39.9483553322286	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933633	True	NA	-17	True	AATAAA	-27	NA	26937981	26905180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
WTC11_00019610	chr12	-	4324	12	FSM	ENSG00000064115.11	ENST00000343028.9	4315	12	0	-9	0	9	multi-exon	FALSE	canonical	3	480	junction_4	73.7395461143953	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTAAATATTTTCAT	-27008338	True	NA	0	True	AATAAA	-28	NA	27014384	26971569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
WTC11_00019611	chr12	-	4049	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-67	-5	combination_of_known_junctions	FALSE	canonical	3	66	junction_10	174.922297034998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCTAAAAAGCCTCA	-27014220	False	NA	-14	True	AATAAA	-14	NA	27014278	26971583	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014077
WTC11_00019612	chr12	-	4101	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	19	-5	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	161.284872198232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCTAAAAAGCCTCA	-27008282	True	NA	-14	True	AATAAA	-14	NA	27014328	26971583	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
WTC11_00019613	chr12	-	412	2	FSM	ENSG00000064115.11	ENST00000544179.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAACATTCTGGACCCT	-26975764	False	NA	NA	False	NA	NA	NA	26975775	26974095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26974228_26975495
WTC11_00019615	chr12	-	541	5	FSM	ENSG00000064115.11	ENST00000545303.5	541	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	271.901981419776	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACTCTTAAATCCAAA	-26995254	False	NA	NA	False	NA	NA	NA	26995268	26975495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26975659_26980565_26980647_26982772_26982860_26990449_26990628_26995236
WTC11_00019621	chr12	-	874	1	FSM	ENSG00000244712.1	ENST00000463466.1	464	1	19	-429	19	429	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCACAACTATCGTAAT	NA	False	NA	NA	False	NA	NA	NA	28565122	28564248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_28564200_28565100
WTC11_00019622	chr12	-	581	1	FSM	ENSG00000274315.1	ENST00000616916.1	503	1	-60	-18	-60	18	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCATGTATTTGGAGAG	-29331985	False	NA	NA	False	AATAAA	-39	NA	29331996	29331415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29331400_29332000
WTC11_00019623	chr12	-	731	1	FSM	ENSG00000273680.1	ENST00000610917.1	651	1	-38	-42	-38	42	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCTTTCAATAAGTAT	-29333399	False	NA	NA	False	NA	NA	NA	29333421	29332690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29332700_29333400
WTC11_00019624	chr12	-	645	6	FSM	ENSG00000087502.19	ENST00000548909.5	645	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	167.944514646951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAAAACCCAAACTG	NA	False	NA	20	True	AAAAAG	-9	NA	29350068	29341017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29341219_29341733_29341762_29343119_29343283_29345442_29345541_29349078_29349178_29350012
WTC11_00019625	chr12	-	1341	14	FSM	ENSG00000087502.19	ENST00000360150.9	5033	14	11	3681	0	0	multi-exon	FALSE	canonical	3	390	junction_4	29.5956977522711	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAGGATA	-29376267	True	NA	5	True	AAGAAA	-36	NA	29381161	29341032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29356381_29356478_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
WTC11_00019627	chr12	-	8862	18	FSM	ENSG00000133687.16	ENST00000539277.6	8846	18	0	-16	0	16	multi-exon	FALSE	canonical	2	11	junction_13	16.8426464810145	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAAGTACTTCATGGT	-29782542	True	NA	-10	True	ATTAAA	-21	NA	29783942	29500823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
WTC11_00019628	chr12	-	9003	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	-4775	0	16	multi-exon	FALSE	canonical	3	35	junction_15	13.1241672997954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAAGTACTTCATGGT	-29782497	True	NA	-10	True	ATTAAA	-21	NA	29783897	29500823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
WTC11_00019629	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	21.8237494868931	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	-30690046	True	NA	-5	True	AATAAA	-21	NA	30695869	30628987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
WTC11_00019630	chr12	-	758	3	FSM	ENSG00000133704.10	ENST00000535598.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAAGTCTTGCCGA	-30637118	True	NA	NA	False	NA	NA	NA	30637149	30631625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30632012_30634082_30634287_30636981
WTC11_00019631	chr12	-	239	3	FSM	ENSG00000133704.10	ENST00000545077.1	239	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACACAATACTGGCCAGA	-30695078	False	NA	NA	False	NA	NA	NA	30695111	30684434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30684458_30690495_30690578_30694977
WTC11_00019638	chr12	-	6167	16	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_5	50.063781541372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	-30750211	True	NA	-5	True	AATAAA	-14	NA	30754939	30709552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343
WTC11_00019639	chr12	-	3570	18	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_5	66.7346654365949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	-30750229	True	NA	-5	True	AATAAA	-14	NA	30754957	30709552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30715082_30716507_30716677_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
WTC11_00019641	chr12	-	451	1	FSM	ENSG00000110888.18	ENST00000614865.1	451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTCTGTGTGTTTA	-30715366	False	NA	NA	False	AATAAA	-17	NA	30715377	30714926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30714900_30715400
WTC11_00019647	chr12	-	624	1	FSM	ENSG00000243517.1	ENST00000495623.1	606	1	7	-25	7	25	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAATAAAAAATAAA	NA	False	NA	NA	False	AATAAA	-13	NA	31252590	31251966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31252000_31252600
WTC11_00019648	chr12	-	2945	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	0	19643	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1064.93536580082	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTTAAATTAAACCAATAG	-31307373	True	NA	NA	False	AAAAAG	-2	NA	31326128	31260940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_31260972_31280588_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
WTC11_00019649	chr12	-	3111	5	FSM	ENSG00000139146.14	ENST00000448582.6	3111	5	0	0	0	0	multi-exon	FALSE	canonical	3	2697	junction_3	157.488094788146	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	NA	False	NA	-26	True	AATAAA	-24	NA	31298521	31280583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076
WTC11_00019650	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2602	junction_5	179.216740289516	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-31307395	True	NA	-26	True	AATAAA	-24	NA	31326150	31280583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
WTC11_00019653	chr12	-	859	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	10	-1	10	1	multi-exon	FALSE	canonical	3	21	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATACCTTAAGCTAATT	-31369266	False	NA	-4	True	AATAAA	-18	NA	31369291	31363479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31363796_31368748
WTC11_00019654	chr12	-	5944	4	ISM	ENSG00000170456.16	ENST00000389082.10	9506	21	198440	2	34055	-2	3prime_fragment	FALSE	canonical	3	10	junction_3	4.32049379893857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTTTGCTTCATTG	NA	False	NA	-7	True	AATAAA	-14	NA	31392696	31382227	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31387787_31389323_31389499_31392266_31392394_31392613
WTC11_00019655	chr12	-	251	2	FSM	ENSG00000170456.16	ENST00000537061.1	578	2	327	0	327	0	multi-exon	FALSE	canonical	3	11	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATATGGAGCCATGGCT	NA	False	NA	NA	False	NA	NA	NA	31426424	31424568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31424688_31426292
WTC11_00019656	chr12	-	3119	9	FSM	ENSG00000170456.16	ENST00000354285.8	3132	9	0	13	0	-13	multi-exon	FALSE	canonical	3	9	junction_3	23.4783810131789	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCCCAAACATCTCTTG	-31590991	False	823	NA	False	AATAAA	-10	NA	31591012	31432387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
WTC11_00019657	chr12	-	612	1	FSM	ENSG00000275769.1	ENST00000621354.1	417	1	-234	39	-234	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTCTTGATCTAATAAA	-31444429	False	NA	-40	True	NA	NA	NA	31444442	31443830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31443800_31444400
WTC11_00019659	chr12	-	2506	6	ISM	ENSG00000170456.16	ENST00000354285.8	3132	9	9	18925	-4	402	5prime_fragment	FALSE	canonical	3	28	junction_4	18.8955021102907	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGCAGGTTTTCCAAA	-31590982	False	823	NA	False	AATAAA	-31	NA	31591003	31451299	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
WTC11_00019660	chr12	-	2620	5	ISM	ENSG00000170456.16	ENST00000389082.10	9506	21	-47	69074	-47	402	5prime_fragment	FALSE	canonical	3	24	junction_4	19.1882125274868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGCAGGTTTTCCAAA	-31590360	True	NA	NA	False	AATAAA	-31	NA	31591183	31451299	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
WTC11_00019661	chr12	-	669	1	ISM	ENSG00000233381.4	ENST00000418260.3	1923	2	35619	748	35619	-748	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCTGCCCAATGGAAGA	NA	False	NA	NA	False	NA	NA	NA	31616439	31615770	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31615800_31616400
WTC11_00019662	chr12	-	1979	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	-24	-3	12	3	multi-exon	FALSE	canonical	3	81	junction_6	12.5797456254091	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACATTTTCCCCTTTTT	-31728134	True	NA	0	True	AATAAA	-28	NA	31729045	31671138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
WTC11_00019663	chr12	-	868	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	12	0	2	0	multi-exon	FALSE	canonical	3	33	junction_5	29.9399398796992	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-31728187	True	NA	-76	True	NA	NA	NA	31729098	31672169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
WTC11_00019664	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	36.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	-31728146	True	NA	NA	False	NA	NA	NA	31729057	31708957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31709168_31709292_31709426_31728970
WTC11_00019665	chr12	-	279	1	FSM	ENSG00000256843.1	ENST00000540596.1	141	1	3	-141	3	141	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTCTGCCTACCAA	NA	False	NA	NA	False	NA	NA	NA	31748237	31747958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31748000_31748200
WTC11_00019666	chr12	-	1169	1	FSM	ENSG00000188375.5	ENST00000340398.5	1114	1	59	-114	59	114	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCATTCTACCACATGT	NA	False	NA	NA	False	AGTAAA	-29	NA	31792239	31791070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31791100_31792200
WTC11_00019667	chr12	-	347	1	FSM	ENSG00000257511.1	ENST00000550917.1	1005	1	698	-40	698	40	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGCCTAAACACAATTC	NA	False	NA	NA	False	NA	NA	NA	32726689	32726342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32726300_32726700
WTC11_00019668	chr12	-	1083	1	FSM	ENSG00000274105.1	ENST00000620472.1	856	1	-552	325	-552	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTACTTTTCTGAATA	NA	False	NA	NA	False	TATAAA	-15	NA	32729576	32728493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32728500_32729600
WTC11_00019669	chr12	-	2845	1	FSM	ENSG00000275854.1	ENST00000620106.1	731	1	-2118	4	-2118	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTTCTTAATCTTTTT	-32739764	False	NA	-1	True	AATAAA	-18	NA	32739778	32736933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32736900_32739800
WTC11_00019670	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	23.2486558751253	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-32754276	True	NA	NA	False	NA	NA	NA	32755897	32746543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
WTC11_00019671	chr12	-	4260	14	NNC	ENSG00000057294.16	novel	4361	14	NA	NA	0	23228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.2391177266043	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAATCATGATTATGG	-32895234	True	NA	NA	False	NA	NA	NA	32896777	32767526	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_32767562_32790758_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
WTC11_00019672	chr12	-	4239	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	-10	0	10	multi-exon	FALSE	canonical	3	145	junction_5	10.8282039138539	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTGCTTGCATTGGC	-32895234	True	NA	-14	True	AATAAA	-36	NA	32896777	32790744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
WTC11_00019673	chr12	-	676	1	FSM	ENSG00000274976.1	ENST00000617667.1	426	1	-272	22	-272	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGAAATGCTAAAACCAA	-32820828	False	NA	NA	False	AATAAA	-2	NA	32820839	32820163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32820200_32820800
WTC11_00019674	chr12	-	1641	3	FSM	ENSG00000274976.1_ENSG00000057294.16	ENST00000552612.5	901	3	0	-740	0	-7	multi-exon	FALSE	canonical	3	145	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATATTTCTCTTACCTT	NA	False	NA	NA	False	AATAAA	-17	NA	32824139	32820148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32821530_32822466_32822632_32824044
WTC11_00019675	chr12	-	1825	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	-326	64	-150	-64	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGTTGAAACAGACAAGC	-32896877	True	NA	60	True	NA	NA	NA	32896927	32893372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32894779_32896508
WTC11_00019676	chr12	-	1296	1	FSM	ENSG00000259937.2	ENST00000561632.2	1025	1	-384	113	-384	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTAGGAGTTCCT	NA	False	NA	NA	False	TTTAAA	-32	NA	33406280	33404984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33405000_33406300
WTC11_00019677	chr12	-	598	1	FSM	ENSG00000273853.1	ENST00000614876.1	543	1	-58	3	-58	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATATTTGGTACTACGTT	-33432900	False	NA	NA	False	AATAAA	-16	NA	33432911	33432313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33432300_33432900
WTC11_00019678	chr12	-	3434	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	-3	0	3	multi-exon	FALSE	canonical	3	13	junction_19	3.16227766016838	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTTGTCAAACATCAGT	-38904846	True	NA	-10	True	AATAAA	-18	NA	38905591	38652199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
WTC11_00019682	chr12	-	6070	33	NIC	ENSG00000139116.19	novel	5040	34	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_11	17.9826305083544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTGTATTGTTCTTT	-39443042	False	NA	-2	True	AATAAA	-19	NA	39443059	39293227	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
WTC11_00019683	chr12	-	6542	34	FSM	ENSG00000139116.19	ENST00000544797.6	5040	34	-343	-1159	-12	0	multi-exon	FALSE	canonical	3	26	junction_8	20.3500134807941	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTGTATTGTTCTTT	-39443385	False	NA	-2	True	AATAAA	-19	NA	39443402	39293227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39318072_39318202_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
WTC11_00019684	chr12	-	7225	10	FSM	ENSG00000151229.13	ENST00000280871.9	7221	10	0	-4	0	4	multi-exon	FALSE	canonical	3	26	junction_3	15.930404193798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTTGCACTTATTTAT	-40104990	True	NA	1	True	AATAAA	-27	NA	40106081	39755020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39760253_39764459_39764613_39764736_39764859_39830102_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
WTC11_00019685	chr12	-	1003	3	FSM	ENSG00000151229.13	ENST00000465517.1	1026	3	0	23	0	-23	multi-exon	FALSE	canonical	3	53	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCCTCAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	39871881	39829430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39830229_39864761_39864883_39871797
WTC11_00019686	chr12	-	3082	4	FSM	ENSG00000151229.13	ENST00000380858.1	3082	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	13.9124245031395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCACTTTTTTCCTGAAG	-40104998	True	NA	NA	False	AATAAA	-18	NA	40106089	39949489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39951366_40028300_40028510_40048050_40048211_40105252
WTC11_00019687	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_6	17.2780384374181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	-42144552	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
WTC11_00019688	chr12	-	7425	7	FSM	ENSG00000151233.11	ENST00000280876.6	1937	7	-188	-5300	-26	0	multi-exon	FALSE	canonical	3	48	junction_6	10.4469559628099	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	NA	False	NA	NA	False	AATAAA	-33	NA	42144900	42081844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42144425
WTC11_00019689	chr12	-	4062	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	34	0	-34	multi-exon	FALSE	canonical	3	14	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAAGCCAAAATAAATCT	-42238085	True	NA	NA	False	NA	NA	NA	42238248	42157137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
WTC11_00019690	chr12	-	1811	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	-3	0	3	multi-exon	FALSE	canonical	3	520	junction_3	21.8108753999991	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTGTGTTTCCACT	-42321225	True	NA	NA	False	ATTAAA	-22	NA	42326094	42312082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
WTC11_00019691	chr12	-	5888	8	FSM	ENSG00000139174.12	ENST00000552240.6	3311	8	-50	-2527	-50	4	multi-exon	FALSE	canonical	3	31	junction_7	10.6022716087311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATTCTCACATTACTAC	-42484017	False	NA	1	True	AATAAA	-20	NA	42484045	42456752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757
WTC11_00019692	chr12	-	5872	8	FSM	ENSG00000139174.12	ENST00000345127.9	5878	8	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_7	21.0693703595276	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	-42589630	True	NA	-9	True	AATAAA	-10	NA	42589746	42456762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42589464
WTC11_00019693	chr12	-	4278	8	FSM	ENSG00000139174.12	ENST00000640132.1	4278	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	19.695643359559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	-42483644	False	NA	-49	True	AATAAA	-3	NA	42483672	42458371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483375
WTC11_00019695	chr12	-	252	1	FSM	ENSG00000240759.1	ENST00000486977.1	252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGCACTCTGAATCAAG	NA	False	NA	NA	False	NA	NA	NA	42679124	42678872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42678900_42679100
WTC11_00019696	chr12	-	1792	4	ISM	ENSG00000173157.18	ENST00000389420.8	6358	39	176757	-1094	64266	1094	3prime_fragment	FALSE	canonical	3	11	junction_2	2.16024689946929	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTAGCACTTTGTTT	NA	False	NA	-9	True	AATAAA	-12	NA	43375446	43352771	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_43354299_43356483_43356589_43369289_43369382_43375378
WTC11_00019697	chr12	-	13554	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	13	0	-4	0	multi-exon	FALSE	canonical	3	30	junction_8	7.44878345771979	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-43756890	True	NA	42	True	AATAAA	-15	NA	43758777	43718991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
WTC11_00019698	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	15.3577138598165	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	-43756871	True	NA	47	True	AATAAA	-20	NA	43758758	43728606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
WTC11_00019699	chr12	-	3949	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	15	-651	0	0	multi-exon	FALSE	canonical	3	5	junction_8	15.039531242695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	-43756871	True	NA	47	True	AATAAA	-20	NA	43758758	43728606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
WTC11_00019700	chr12	-	1873	8	FSM	ENSG00000129317.15	ENST00000431332.7	1873	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	16.4142794976987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTTGACCATTTGTAA	-43756906	True	NA	NA	False	AATACA	-37	NA	43758793	43729762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43758729
WTC11_00019702	chr12	-	3313	10	NNC	ENSG00000151239.14	novel	2987	9	NA	NA	-290	17848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.1196175467782	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGATATTAAATGAAGG	-43806561	True	NA	NA	False	NA	NA	NA	43806618	43775874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_43775900_43793722_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
WTC11_00019703	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	27.4806750280993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	-43804350	True	NA	-1	True	AATAAA	-17	NA	43806317	43793722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
WTC11_00019705	chr12	-	3570	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	29	-46	0	43	multi-exon	FALSE	canonical	3	182	junction_11	26.1662064524226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGATTCTATAAAAATTG	-44873322	True	NA	38	True	NA	NA	NA	44876286	44508231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
WTC11_00019706	chr12	-	3204	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	-8	0	1	multi-exon	FALSE	canonical	3	88	junction_20	38.3685743806048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCTGAGTATCTTGT	-44873391	True	NA	-4	True	AATAAA	-24	NA	44876355	44508273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
WTC11_00019708	chr12	-	755	2	FSM	ENSG00000184613.11	ENST00000550139.1	749	2	0	-6	0	6	multi-exon	FALSE	canonical	3	203	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAATATTTATTTGG	-44532603	True	NA	NA	False	AATAAA	-28	NA	44532621	44522770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44523485_44532580
WTC11_00019711	chr12	-	558	3	FSM	ENSG00000184613.11	ENST00000548826.5	559	3	0	1	0	-1	multi-exon	FALSE	canonical	3	225	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCTTCTCTTGTATAT	-44876001	False	NA	NA	False	ATTAAA	-15	NA	44876016	44815909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44816137_44875224_44875354_44875814
WTC11_00019712	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	11	junction_2	4.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	-45215073	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45174643_45176240_45176434_45215939
WTC11_00019715	chr12	-	9543	1	FSM	ENSG00000273015.2	ENST00000609803.2	9730	1	4	183	4	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATCCCATCTTGGTGT	-45727755	False	NA	NA	False	AAGAAA	-33	NA	45727771	45718228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45718200_45727800
WTC11_00019716	chr12	-	7556	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	-4	0	4	multi-exon	FALSE	canonical	1	56	junction_2	65.9545297913646	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTTATTATTAAG	-45985347	True	NA	NA	False	AATAAA	-22	NA	45990574	45919126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
WTC11_00019718	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	112.241802472262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-45985353	True	NA	-8	True	AATAAA	-20	NA	45990580	45960454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
WTC11_00019720	chr12	-	7718	17	FSM	ENSG00000111371.16	ENST00000546893.5	2332	17	124	-5510	0	8	multi-exon	FALSE	canonical	3	324	junction_16	78.7313469972412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTGTTCTTTTGC	-46261597	True	NA	-3	True	ATTAAA	-27	NA	46268995	46183054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268864
WTC11_00019721	chr12	-	8105	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	-8	0	8	multi-exon	FALSE	canonical	3	205	junction_16	103.632444696388	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTGTTCTTTTGC	-46269026	False	NA	-3	True	ATTAAA	-27	NA	46269043	46183054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
WTC11_00019723	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	185.474888478347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-46261599	True	NA	6	True	NA	NA	NA	46268997	46187800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
WTC11_00019729	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	587	junction_14	74.2872502893703	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	-46346607	True	NA	-16	True	AATAAA	-18	NA	46372773	46358187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
WTC11_00019730	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	197.885866919623	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	-46346605	True	NA	-11	True	AATAAA	-22	NA	46372771	46358480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
WTC11_00019731	chr12	-	528	2	FSM	ENSG00000134294.14	ENST00000552703.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	-46362538	False	NA	NA	False	NA	NA	NA	46362561	46360959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46361210_46362283
WTC11_00019736	chr12	-	1109	2	Antisense	novelGene_ENSG00000257261.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACATAAATTACCCAGTC	-46669535	True	NA	NA	False	AATAAA	-8	NA	46669907	46668604	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_46669125_46669318
WTC11_00019737	chr12	-	3757	16	FSM	ENSG00000139209.16	ENST00000447411.5	3791	16	34	0	22	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0246879560243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46825445	False	NA	-26	True	AATAAA	-18	NA	46825963	46764760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46825902
WTC11_00019738	chr12	-	3802	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	6.15142259969188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46831914	True	NA	-26	True	AATAAA	-18	NA	46832432	46764760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
WTC11_00019739	chr12	-	3206	3	FSM	ENSG00000139211.7	ENST00000550413.2	3224	3	0	18	0	-18	multi-exon	FALSE	canonical	3	11	junction_1	5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCTCTCTCCAAAATT	-47079744	True	NA	-14	True	TATAAA	-13	NA	47079959	47076464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079141_47079249_47079461
WTC11_00019740	chr12	-	3771	2	FSM	ENSG00000139211.7	ENST00000266581.4	3763	2	-766	758	-672	-18	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCTCTCTCCAAAATT	-47080599	False	NA	-14	True	TATAAA	-13	NA	47080631	47076464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079461
WTC11_00019741	chr12	-	3058	3	FSM	ENSG00000139211.7	ENST00000429635.1	3058	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTTGAATTAAT	-47079736	True	NA	0	True	ATTAAA	-20	NA	47079951	47076599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079146_47079249_47079461
WTC11_00019742	chr12	-	4957	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	-618	0	618	multi-exon	FALSE	canonical	3	280	junction_6	34.5316317852198	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTTGTTTGATTCATT	-47700747	True	NA	NA	False	ATTAAA	-14	NA	47706030	47660630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
WTC11_00019743	chr12	-	555	2	FSM	ENSG00000005175.10	ENST00000548211.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTAAGGATCAGCAT	-47664829	False	NA	-18	True	AATAAA	-18	NA	47664843	47663289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47663591_47664589
WTC11_00019744	chr12	-	2150	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	-1	0	0	multi-exon	FALSE	canonical	3	42	junction_5	84.4401168481743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTGTAAGGATCAGC	-47700703	True	NA	-20	True	AATAAA	-16	NA	47705986	47663291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
WTC11_00019745	chr12	-	648	1	FSM	ENSG00000276390.1	ENST00000611728.1	517	1	-32	-99	-32	99	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCATCTCAGATGATTT	-47694666	False	NA	NA	False	NA	NA	NA	47699949	47699301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47699300_47699900
WTC11_00019747	chr12	-	205	3	FSM	ENSG00000079337.16	ENST00000490387.1	699	3	494	0	494	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAGAGGGCGGGTCCC	NA	False	NA	NA	False	NA	NA	NA	47739230	47738195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47738248_47738689_47738755_47739142
WTC11_00019748	chr12	-	4113	16	FSM	ENSG00000079337.16	ENST00000395358.7	4092	16	0	-21	0	21	multi-exon	FALSE	canonical	2	6	junction_11	5.87499408983154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGAATAATGCCTGGC	-47758513	False	NA	19	True	AATAAA	-40	NA	47758645	47744431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
WTC11_00019749	chr12	-	834	8	FSM	ENSG00000079337.16	ENST00000466322.5	855	8	21	0	21	0	multi-exon	FALSE	canonical	2	3	junction_7	7.34291272908366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGCAAGGCAGGGACCG	-47758285	False	NA	NA	False	NA	NA	NA	47758417	47749952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758371
WTC11_00019750	chr12	-	648	5	FSM	ENSG00000079337.16	ENST00000495953.2	648	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.25999201277446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCGGGCCCGAGCCCGA	-47758051	False	130	NA	False	NA	NA	NA	47758183	47751169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865
WTC11_00019751	chr12	-	6418	11	FSM	ENSG00000061273.18	ENST00000459625.5	6414	11	0	-4	0	0	multi-exon	FALSE	canonical	3	120	junction_8	24.5782424107177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47793484	False	22	-9	True	AATAAA	-20	NA	47793498	47782721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47791309_47791585_47791707_47791870
WTC11_00019752	chr12	-	4270	21	FSM	ENSG00000061273.18	ENST00000470668.5	4266	21	0	-4	0	0	multi-exon	TRUE	canonical	2	4	junction_13	47.3572592112339	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47798175	False	23	-9	True	AATAAA	-20	NA	47798189	47782721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792670_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107
WTC11_00019753	chr12	-	4065	25	FSM	ENSG00000061273.18	ENST00000354334.7	4065	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_17	40.5215777566581	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47817034	True	NA	-9	True	AATAAA	-20	NA	47819866	47782721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
WTC11_00019754	chr12	-	4213	26	FSM	ENSG00000061273.18	ENST00000080059.12	4213	26	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_25	37.6275218423962	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47817071	True	NA	-9	True	AATAAA	-20	NA	47819903	47782721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
WTC11_00019755	chr12	-	3216	25	FSM	ENSG00000061273.18	ENST00000552960.5	3216	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_24	36.4084658958447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGACCCTGAGAGGAGAC	-47817054	True	NA	NA	False	NA	NA	NA	47819886	47783650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
WTC11_00019757	chr12	-	652	3	FSM	ENSG00000061273.18	ENST00000471235.1	1012	3	360	0	360	0	multi-exon	FALSE	canonical	3	163	junction_1	11	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTGGAAACAGAAACCCAA	-47787791	False	NA	NA	False	NA	NA	NA	47787809	47785450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47785886_47786584_47786704_47787711
WTC11_00019759	chr12	-	548	2	FSM	ENSG00000061273.18	ENST00000491464.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCCTGAGGCCAGAGGC	-47795590	False	NA	NA	False	NA	NA	NA	47795604	47794806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47794934_47795183
WTC11_00019762	chr12	-	5057	54	FSM	ENSG00000139219.19	ENST00000380518.8	5059	54	0	2	0	-2	multi-exon	TRUE	canonical	3	31	junction_52	12.758372815359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTGACTTGTGGTTT	-48003268	True	NA	-3	True	ATTAAA	-22	NA	48004476	47972968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_47999918_48000126_48004236
WTC11_00019764	chr12	-	253	1	FSM	ENSG00000276814.1	ENST00000616571.1	978	1	652	73	652	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCGAAGTGAAGTGCTT	-48040098	False	NA	NA	False	NA	NA	NA	48040109	48039856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48039900_48040100
WTC11_00019765	chr12	-	4968	19	FSM	ENSG00000079387.14	ENST00000552189.5	4967	19	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_15	41.4728827066554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCTCCTGTGTCCAC	-48105702	False	NA	NA	False	ACTAAA	-23	NA	48105834	48042896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48089162_48089294_48096342_48096428_48097993_48098125_48101468_48101517_48105401
WTC11_00019766	chr12	-	4706	18	FSM	ENSG00000079387.14	ENST00000549518.6	4456	18	-250	0	-250	0	multi-exon	FALSE	canonical	3	23	junction_17	28.2243851475106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCTCCTGTGTCCAC	NA	False	NA	NA	False	ACTAAA	-23	NA	48106329	48042896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48106027
WTC11_00019769	chr12	-	809	1	FSM	ENSG00000240399.1	ENST00000468202.1	779	1	-52	22	-52	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAAAAAGCTGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	48055643	48054834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48054800_48055600
WTC11_00019771	chr12	-	965	5	FSM	ENSG00000079387.14	ENST00000547886.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.8586111963537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGGCAAAAACACAGG	-48096295	False	NA	NA	False	AATAAA	-5	NA	48096427	48080083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48080501_48083590_48083763_48088800_48088961_48089162_48089294_48096342
WTC11_00019773	chr12	-	2534	4	FSM	ENSG00000177981.11	ENST00000317697.8	2534	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	3.85861230093008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-48156748	True	NA	1	True	AATAAA	-16	NA	48157515	48147788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48149999_48151200_48151306_48153367_48153530_48157458
WTC11_00019774	chr12	-	7149	6	FSM	ENSG00000167528.13	ENST00000547026.6	7227	6	69	9	41	-9	multi-exon	FALSE	canonical	3	17	junction_3	2.03960780543711	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCACTTATTTGTTC	-48350391	True	NA	-12	True	AATAAA	-11	NA	48350850	48337188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350785
WTC11_00019775	chr12	-	2332	10	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	-14	at_least_one_novel_splicesite	TRUE	canonical	2	153	junction_5	40.7279441182435	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAGTTCCAAATATCTT	-48678533	True	NA	51	True	ATTAAA	-3	NA	48682211	48653224	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
WTC11_00019776	chr12	-	1178	3	FSM	ENSG00000139620.13	ENST00000549463.5	650	3	-126	-402	-126	-76	multi-exon	FALSE	canonical	2	9	junction_2	81.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATTTTGGTTTTGCTT	-48658781	False	NA	-11	True	AATAAA	-9	NA	48658800	48653286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48658631
WTC11_00019777	chr12	-	831	5	FSM	ENSG00000139620.13	ENST00000547087.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	92.5364792933036	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAAAGCTTCTGGGATT	-48669215	False	17	NA	False	NA	NA	NA	48669225	48653833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105
WTC11_00019778	chr12	-	461	5	FSM	ENSG00000139620.13	ENST00000550931.5	461	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	93.3926522805729	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGCTAATTCGTTTG	-48678560	True	NA	NA	False	NA	NA	NA	48682238	48671918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48671963_48679035_48679151_48679654_48679834_48681570_48681642_48682186
WTC11_00019780	chr12	-	6488	2	FSM	ENSG00000129315.11	ENST00000551989.1	726	2	-290	-5472	-290	0	multi-exon	TRUE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	NA	False	NA	0	True	AATAAA	-21	NA	48696267	48688457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48694437_48695758
WTC11_00019781	chr12	-	6319	3	ISM	ENSG00000129315.11	ENST00000261900.8	6788	9	20440	0	-290	0	3prime_fragment	TRUE	canonical	3	14	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	NA	False	NA	0	True	AATAAA	-21	NA	48696267	48688457	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_48694437_48695758_48695830_48695998
WTC11_00019782	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	6.05056815514047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	-48713336	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
WTC11_00019783	chr12	-	6093	22	FSM	ENSG00000174233.12	ENST00000357869.8	6092	22	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_18	8.87657877752745	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTCTGTAGCTGT	-48788831	True	NA	-2	True	AATAAA	-20	NA	48789089	48766192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48768717_48768936_48769062_48770765_48770971_48771709_48771974_48772294_48772425_48772507_48772544_48773468_48773648_48773939_48774099_48774401_48774519_48774690_48774779_48774956_48775055_48775302_48775451_48775672_48775699_48775962_48776092_48776208_48776351_48776427_48776587_48777103_48777232_48777409_48777522_48777614_48777737_48778107_48778258_48782570_48783439_48788905
WTC11_00019784	chr12	-	3257	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	-1	0	1	multi-exon	FALSE	canonical	3	168	junction_11	24.0083806982062	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGTTCTAGTTAAACTT	-48847414	True	NA	-4	True	AATAAA	-24	NA	48852163	48829754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
WTC11_00019785	chr12	-	1399	3	FSM	ENSG00000174243.10	ENST00000549795.5	579	3	-514	-306	-298	306	multi-exon	FALSE	canonical	3	208	junction_2	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACACCACACCTTTTTC	-48833827	False	NA	NA	False	NA	NA	NA	48833859	48831522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48832187_48832421_48832574_48833276
WTC11_00019792	chr12	-	1665	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	-12	0	12	multi-exon	FALSE	canonical	3	29	junction_2	5.7662812973354	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTGTTTTCTTTAG	-48864607	True	NA	1	True	TATAAA	-16	NA	48865870	48857132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
WTC11_00019793	chr12	-	3557	6	NNC	ENSG00000134287.10	novel	807	6	NA	NA	0	40312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	383.206993673132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAATTGAAGCCAGCC	-48923677	True	NA	NA	False	NA	NA	NA	48957462	48895410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48895438_48936208_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
WTC11_00019794	chr12	-	948	5	FSM	ENSG00000272822.2	ENST00000398092.4	939	5	0	-9	0	9	multi-exon	FALSE	canonical	3	5	junction_1	422.082041788086	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGTGGAAAAGAGCTGCCC	-48923580	True	NA	NA	False	NA	NA	NA	48957365	48903493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48903909_48939654_48939780_48939996_48940108_48940947_48941189_48957309
WTC11_00019795	chr12	-	514	4	FSM	ENSG00000134285.11	ENST00000551094.5	517	4	0	3	0	-1	multi-exon	FALSE	canonical	3	467	junction_1	53.7835166818484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCATTCTTCATCTG	-48924719	False	NA	-15	True	AATAAA	-19	NA	48924729	48921961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560
WTC11_00019796	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	206.246212086428	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924957	False	4526	-12	True	AATAAA	-22	NA	48924967	48921958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
WTC11_00019797	chr12	-	695	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	-4	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.1417180936089	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48920966	True	NA	-12	True	AATAAA	-22	NA	48925492	48921958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
WTC11_00019798	chr12	-	959	6	FSM	ENSG00000134285.11	ENST00000453172.2	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	162.593234791611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCTGGAGTGCAATAG	-48920994	True	NA	53	True	NA	NA	NA	48925520	48923125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48923605_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
WTC11_00019799	chr12	-	4120	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	-43	-36	-43	36	multi-exon	FALSE	canonical	3	867	junction_1	55.312747174589	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCCTGCATCAGCTCTA	-48957512	False	NA	0	True	GATAAA	-41	NA	48957530	48935686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
WTC11_00019800	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	417.172492967704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-48923692	True	NA	-57	True	NA	NA	NA	48957477	48938553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
WTC11_00019803	chr12	-	1659	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	-2	0	2	multi-exon	FALSE	canonical	3	252	junction_11	36.4974809500941	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTTTGATTTTTAC	-49015378	True	NA	0	True	ATTAAA	-23	NA	49018776	49002271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
WTC11_00019805	chr12	-	1015	8	FSM	ENSG00000181929.13	ENST00000551770.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	164.706541758241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTGAACTATAGGC	NA	False	NA	NA	False	NA	NA	NA	49005835	49002639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003756_49003923_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742
WTC11_00019806	chr12	-	816	6	FSM	ENSG00000181929.13	ENST00000552793.5	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	11.7541482039321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGTGAGAGATTGGGCA	NA	False	NA	NA	False	NA	NA	NA	49005829	49003761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461
WTC11_00019808	chr12	-	553	2	FSM	ENSG00000181929.13	ENST00000552657.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAGCTCAGGAGTTTG	-49015388	True	NA	NA	False	NA	NA	NA	49018786	49012612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49013111_49018731
WTC11_00019810	chr12	-	860	3	ISM	ENSG00000167548.18	ENST00000552391.2	928	4	0	871	0	321	5prime_fragment	FALSE	canonical	3	7	junction_2	2.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCAAGAGCAGATGCC	-49031377	False	NA	NA	False	NA	NA	NA	49031404	49030279	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49030769_49030892_49031034_49031174
WTC11_00019811	chr12	-	2444	2	FSM	ENSG00000167548.18	ENST00000683043.1	2444	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGAGGCAGGAGAGTTG	-49039272	False	NA	NA	False	NA	NA	NA	49039286	49036610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49038990_49039221
WTC11_00019812	chr12	-	8541	32	NIC	ENSG00000167548.18	novel	20635	55	NA	NA	67	-1168	combination_of_known_junctions	TRUE	canonical	1	1	junction_19	5.66475861043206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATTTGCCCCATTGCA	-49060101	False	NA	NA	False	NA	NA	NA	49060727	49040389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49041536_49041654_49041706_49041916_49041991_49042088_49042331_49042560_49042646_49042740_49042879_49043075_49043187_49043362_49043429_49043634_49043783_49043867_49043999_49044190_49044305_49044402_49044523_49044743_49044966_49045919_49045968_49046064_49046175_49046259_49046425_49046608_49046791_49047964_49048070_49048658_49048770_49049104_49049219_49049681_49050791_49050885_49052425_49052563_49052710_49052914_49053073_49053206_49053322_49053475_49053642_49053977_49054141_49054306_49054417_49054527_49054752_49054899_49055027_49055275_49055362_49059612
WTC11_00019814	chr12	-	1073	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	-10	0	0	multi-exon	FALSE	canonical	3	16	junction_5	23.7024377555465	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-49069321	True	NA	-3	True	AATAAA	-23	NA	49069947	49064675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
WTC11_00019815	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	8.0609919883805	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-49069353	True	NA	-3	True	AATAAA	-23	NA	49069979	49064675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
WTC11_00019818	chr12	-	910	5	FSM	ENSG00000139636.16	ENST00000547698.5	905	5	0	-5	0	-1	multi-exon	FALSE	canonical	2	14	junction_1	37.110476957323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTGTCTCTGTGTATA	-49099368	False	NA	-6	True	AATAAA	-32	NA	49101549	49097139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49100387_49100455_49100555_49100647_49101249_49101324_49101471
WTC11_00019819	chr12	-	2822	15	FSM	ENSG00000139636.16	ENST00000550867.5	2800	15	0	-22	0	0	multi-exon	FALSE	canonical	3	81	junction_3	12.7639479530018	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTGTGTATATTTG	-49108486	False	NA	-2	True	AATAAA	-36	NA	49110667	49097135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
WTC11_00019820	chr12	-	2241	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	-6	0	0	multi-exon	FALSE	canonical	3	28	junction_5	21.1917399887315	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTGTGTATATTTG	-49108669	True	NA	-2	True	AATAAA	-36	NA	49110850	49097135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
WTC11_00019821	chr12	-	2298	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	-3	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.159744035135	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTGTGTATATTTG	-49108666	True	NA	-2	True	AATAAA	-36	NA	49110847	49097135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
WTC11_00019829	chr12	-	3019	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	187	-8	187	4	multi-exon	FALSE	canonical	3	8627	junction_1	432	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTGCGTTTTTTTCT	-49131198	False	NA	-4	True	AGTAAA	-21	NA	49131208	49127777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49128939_49129241_49129391_49129499
WTC11_00019830	chr12	-	1639	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	-12	0	12	multi-exon	FALSE	canonical	3	8627	junction_1	801.186342591757	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTTTTTCTAAAAGTGC	-48914974	True	NA	4	True	AGTAAA	-29	NA	49131395	49127769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
WTC11_00019832	chr12	-	1693	5	NNC	ENSG00000167552.15	novel	1777	5	NA	NA	0	50152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1219.36897102559	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAACATCATGCAAATA	-49164122	True	NA	NA	False	NA	NA	NA	49189066	49134533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49134569_49184794_49185991_49186309_49186459_49186610_49186834_49188976
WTC11_00019833	chr12	-	1694	5	NNC	ENSG00000167552.15	novel	1777	5	NA	NA	0	50152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1219.36897102559	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAACATCATGCAAATA	-49164122	True	NA	NA	False	NA	NA	NA	49189066	49134533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49134571_49184795_49185991_49186309_49186459_49186610_49186834_49188976
WTC11_00019834	chr12	-	1691	5	NNC	ENSG00000167552.15	novel	1777	5	NA	NA	0	50152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1219.36897102559	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAACATCATGCAAATA	-49164122	True	NA	NA	False	NA	NA	NA	49189066	49134533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49134571_49184798_49185991_49186309_49186459_49186610_49186834_49188976
WTC11_00019835	chr12	-	2566	3	FSM	ENSG00000167552.15	ENST00000550811.2	2628	3	62	0	62	0	multi-exon	FALSE	canonical	3	2167	junction_1	306.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-49187773	False	NA	NA	False	AATGAA	-25	NA	49187807	49184770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610
WTC11_00019836	chr12	-	1696	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	-24	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	403.893000131911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-49164136	True	NA	NA	False	AATGAA	-25	NA	49189080	49184770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
WTC11_00019837	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_3	913.41350013136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	-49188865	False	NA	NA	False	NA	NA	NA	49188899	49184958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
WTC11_00019839	chr12	-	1952	16	NNC	ENSG00000187778.14	novel	1936	16	NA	NA	0	26711	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.850110431499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGCACTTTTGTTTA	-49562011	True	NA	NA	False	AAAAAG	-1	NA	49568128	49529832	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49529864_49558301_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
WTC11_00019840	chr12	-	1965	16	NNC	ENSG00000187778.14	novel	1938	15	NA	NA	0	26711	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.850110431499	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGCACTTTTGTTTA	-49562025	True	NA	NA	False	AAAAAG	-1	NA	49568142	49529832	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49529863_49558301_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
WTC11_00019841	chr12	-	1938	15	NIC	ENSG00000187778.14	novel	1936	16	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	183.941705494997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561664	False	NA	-9	True	AATAAA	-18	NA	49567781	49558301	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567683
WTC11_00019842	chr12	-	2532	14	FSM	ENSG00000187778.14	ENST00000551625.5	2450	14	-82	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	175.119063469779	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561715	False	NA	-9	True	AATAAA	-18	NA	49567832	49558301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566842_49567646
WTC11_00019843	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_5	59.1494561535887	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-49562025	True	NA	-6	True	AATAAA	-21	NA	49568142	49558298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
WTC11_00019845	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	223.112487822224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	-49561984	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
WTC11_00019851	chr12	-	876	7	FSM	ENSG00000187778.14	ENST00000548334.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	253.562232115817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTTTAGCAAGGCTG	-49561715	False	NA	NA	False	NA	NA	NA	49567832	49563486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567683
WTC11_00019854	chr12	-	12625	26	FSM	ENSG00000161791.14	ENST00000335154.10	12625	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.87674341530931	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGTGAATTCAGTTAT	-49707296	False	NA	-9	True	AATAAA	-15	NA	49707405	49636498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49645904_49646885_49647010_49647275_49647369_49647702_49647805_49648192_49648354_49649028_49649159_49649258_49649340_49649469_49649539_49649690_49649926_49650675_49650879_49651167_49651293_49651381_49651451_49651932_49652213_49653225_49653328_49653724_49653875_49654191_49654303_49654909_49654985_49656403_49656498_49656822_49656900_49657081_49657191_49658441_49658595_49661965_49662050_49665831_49665909_49666126_49666208_49668470_49668555_49707054
WTC11_00019855	chr12	-	599	1	ISM	ENSG00000161791.14	ENST00000335154.10	12625	26	62305	8003	-5957	429	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGACTCTTCCCTGG	-49645089	False	NA	NA	False	NA	NA	NA	49645100	49644501	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49644500_49645100
WTC11_00019858	chr12	-	4242	5	FSM	ENSG00000167566.17	ENST00000433948.5	4235	5	0	-7	0	7	multi-exon	FALSE	canonical	3	102	junction_1	10.7558123821495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTTGTTGTGTGGGAG	-49796981	False	NA	0	True	AATAAA	-28	NA	49797002	49791138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764
WTC11_00019859	chr12	-	4897	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	-15	0	9	multi-exon	TRUE	canonical	3	85	junction_1	10.9873664825663	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTGTTGTGTGGGAGGA	-49825730	True	NA	2	True	AATAAA	-30	NA	49828413	49791136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
WTC11_00019861	chr12	-	1906	3	FSM	ENSG00000167566.17	ENST00000477361.1	2596	3	0	690	0	-234	multi-exon	FALSE	canonical	3	98	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAACCCAGACACCCT	NA	False	NA	NA	False	NA	NA	NA	49805719	49802957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49802997_49803096_49803166_49803921
WTC11_00019862	chr12	-	3227	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	-1	0	1	multi-exon	FALSE	canonical	3	21	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTGGTGATTTCT	-49842697	True	NA	-3	True	AATAAA	-18	NA	49843106	49836041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49839016_49842853
WTC11_00019863	chr12	-	3121	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	-15	0	15	multi-exon	FALSE	canonical	3	131	junction_16	39.8245664602893	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTTGCAAGGTAATTT	-50017647	True	NA	NA	False	AGTAAA	-34	NA	50025494	49989146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
WTC11_00019864	chr12	-	3082	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	-2	0	0	multi-exon	FALSE	canonical	3	58	junction_16	55.4199873691794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-50017553	True	NA	NA	False	AGTAAA	-19	NA	50025400	49989161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
WTC11_00019865	chr12	-	838	7	FSM	ENSG00000161800.13	ENST00000549342.1	841	7	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_5	107.347436961589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGCAAGAGAACATTGAC	-49999707	False	NA	NA	False	NA	NA	NA	49999733	49992078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49999140_49999272_49999615
WTC11_00019866	chr12	-	582	7	FSM	ENSG00000161800.13	ENST00000548598.5	582	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	101.717610187333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCAAATTATCTCTGAA	-50017614	True	NA	NA	False	ATTAAA	-37	NA	50025461	49997159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50016630_50016720_50025397
WTC11_00019867	chr12	-	570	7	FSM	ENSG00000161800.13	ENST00000550149.5	570	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	103.530054680862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTGTCCACTATTG	-50017630	True	NA	NA	False	NA	NA	NA	50025477	49999674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50016630_50016720_50025397
WTC11_00019873	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_9	58.2103465411815	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-50162058	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
WTC11_00019874	chr12	-	2814	11	FSM	ENSG00000139624.14	ENST00000422340.6	2855	11	58	-17	30	0	multi-exon	FALSE	canonical	3	32	junction_10	173.862589420496	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-50167458	False	NA	NA	False	AATAAA	-13	NA	50167475	50129288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
WTC11_00019875	chr12	-	2701	8	FSM	ENSG00000139624.14	ENST00000551005.5	2700	8	0	-1	0	0	multi-exon	FALSE	canonical	3	12	junction_1	166.574246484373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	NA	False	NA	-5	True	ATTAAA	-15	NA	50144136	50129797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50134399_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073
WTC11_00019876	chr12	-	2998	10	FSM	ENSG00000139624.14	ENST00000380189.8	2998	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	218.8553273763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	-50162009	True	NA	-5	True	ATTAAA	-15	NA	50167320	50129797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50132961_50134069_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50143073_50143205_50143951_50144058_50167100
WTC11_00019886	chr12	-	3612	8	FSM	ENSG00000050405.14	ENST00000552783.5	3612	8	9	-9	9	7	multi-exon	FALSE	canonical	3	21	junction_3	54.5755421037516	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTCTTCCATTATTT	-50219178	True	NA	1	True	AATAAA	-28	NA	50222696	50175780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
WTC11_00019887	chr12	-	3677	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	-8	0	8	multi-exon	FALSE	canonical	3	21	junction_3	68.5026276868267	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTCTTCCATTATTTT	-50282728	True	NA	2	True	AATAAA	-29	NA	50283506	50175779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
WTC11_00019888	chr12	-	3699	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-12	-7	-12	7	multi-exon	FALSE	canonical	3	36	junction_10	60.5636854889132	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTCTTCCATTATTT	-50282754	True	NA	1	True	AATAAA	-28	NA	50283532	50175780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
WTC11_00019889	chr12	-	3577	8	FSM	ENSG00000050405.14	ENST00000552823.5	3254	8	-318	-5	39	5	multi-exon	FALSE	canonical	3	136	junction_3	18.3258488123709	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTCTCTTCCATTAT	-50219148	True	NA	-1	True	AATAAA	-26	NA	50222666	50175782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
WTC11_00019890	chr12	-	4130	17	NNC	ENSG00000110911.17	novel	3993	17	NA	NA	0	64250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9588500422847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAAGCAGCTTCAG	-51022631	True	NA	NA	False	NA	NA	NA	51026365	50915150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_50915175_50985993_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
WTC11_00019891	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	67.5233466569156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-51022650	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
WTC11_00019893	chr12	-	3992	17	NIC	ENSG00000110911.17	novel	3993	17	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	110.299875339911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTTCCTGGGTATT	-51022625	True	NA	-2	True	ATTAAA	-18	NA	51026359	50985993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996909_50999173_50999242_50999344_50999416_51000312_51000420_51000597_51000634_51004787_51004908_51005310_51005437_51008475_51008545_51010694_51010767_51026314
WTC11_00019894	chr12	-	4130	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	2	0	-1	multi-exon	FALSE	canonical	1	86	junction_8	57.0908048638307	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTTCCTGGGTATT	-51022650	True	NA	-2	True	ATTAAA	-18	NA	51026384	50985993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
WTC11_00019902	chr12	-	7683	4	ISM	ENSG00000110925.7	ENST00000228515.6	4517	5	3525	0	3039	0	3prime_fragment	FALSE	canonical	3	48	junction_2	12.5521135891752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	-51078888	False	NA	0	True	ATTAAA	-17	NA	51080071	51061204	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410
WTC11_00019903	chr12	-	4518	5	FSM	ENSG00000110925.7	ENST00000228515.6	4517	5	0	-1	0	1	multi-exon	FALSE	canonical	3	19	junction_4	22.9455878111675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTACTCTTTGTCTC	-51082413	True	NA	1	True	ATTAAA	-18	NA	51083596	51061203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083338
WTC11_00019906	chr12	-	3716	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	9	82	8	70	multi-exon	TRUE	canonical	3	202	junction_14	31.52517620401	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAAAACTTTGAAACC	-51170657	True	NA	14	True	ATTAAA	-41	NA	51173126	51093737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
WTC11_00019912	chr12	-	5149	11	FSM	ENSG00000184271.18	ENST00000636728.1	5157	11	0	8	0	-8	multi-exon	FALSE	canonical	3	7	junction_6	4.97995983919549	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTACTGGTCTGCTTG	-51217669	False	NA	-8	True	AATAAA	-12	NA	51217693	51186943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198687_51199746_51199869_51204172_51204369_51206788_51206884_51217641
WTC11_00019913	chr12	-	2474	6	FSM	ENSG00000184271.18	ENST00000636119.1	2474	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	2.99332590941915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTCTAATTTTCTTTG	NA	False	NA	-3	True	AATAAA	-36	NA	51198167	51189160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769
WTC11_00019914	chr12	-	2960	11	FSM	ENSG00000184271.18	ENST00000333640.12	5615	11	391	2264	-4	-39	multi-exon	FALSE	canonical	2	3	junction_7	6.07947366142827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGATGGAGCCCAGGAA	-51217647	False	NA	-42	True	AATAAA	-42	NA	51217671	51189199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198776_51199746_51199869_51204172_51204369_51206788_51206884_51217641
WTC11_00019917	chr12	-	3225	3	ISM	ENSG00000184271.18	ENST00000546685.5	364	4	-419	3044	-24	2637	5prime_fragment	FALSE	canonical	3	14	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTAAGCTTTCATCATT	-51218062	False	NA	-6	True	AATAAA	-21	NA	51218086	51201683	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_51204369_51206788_51206884_51217641
WTC11_00019919	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	-51269938	False	556	NA	False	NA	NA	NA	51269958	51246084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
WTC11_00019920	chr12	-	816	3	FSM	ENSG00000170545.17	ENST00000603838.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	34	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAAGAGGGGGAGGATC	-51269892	False	NA	NA	False	NA	NA	NA	51269912	51246463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246832_51269244_51269317_51269536
WTC11_00019922	chr12	-	5200	11	FSM	ENSG00000139629.16	ENST00000543196.6	5207	11	0	7	0	-2	multi-exon	FALSE	canonical	3	11	junction_3	9.29731143933557	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGATTGGATTTACTTT	-51383125	False	NA	NA	False	TATAAA	-15	NA	51383563	51351253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51360720_51360839_51364120_51364356_51365429_51365580_51377194_51377368_51379290_51379885_51383460
WTC11_00019923	chr12	-	549	3	FSM	ENSG00000139629.16	ENST00000605822.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGCTGGGGTGCCCCTT	NA	False	NA	NA	False	NA	NA	NA	51391955	51379812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51379885_51383460_51383583_51391600
WTC11_00019925	chr12	-	362	1	FSM	ENSG00000257851.2	ENST00000547726.2	1138	1	480	296	480	-296	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAGTAGTAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	51713126	51712764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51712800_51713100
WTC11_00019926	chr12	-	1459	8	NNC	ENSG00000170421.13	novel	1784	8	NA	NA	-83	-2	at_least_one_novel_splicesite	FALSE	canonical	2	78	junction_7	1021.29167913851	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTGTGTGCATC	-52902180	False	NA	-6	True	AATAAA	-23	NA	52902287	52897188	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52902195
WTC11_00019927	chr12	-	1754	8	FSM	ENSG00000170421.13	ENST00000692008.1	1784	8	32	-2	0	-2	multi-exon	FALSE	canonical	3	2856	junction_6	101.816962621908	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTGTGTGCATC	-52887808	True	NA	-6	True	AATAAA	-23	NA	52905044	52897188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657
WTC11_00019928	chr12	-	2124	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	2	0	-2	multi-exon	FALSE	canonical	3	59	junction_8	966.717092793957	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTGTGTGCATC	-52948566	True	NA	-6	True	AATAAA	-23	NA	52949842	52897188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
WTC11_00019929	chr12	-	770	4	FSM	ENSG00000170421.13	ENST00000549176.1	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	2856	junction_3	39.0469802502917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCCTCAAAGGCCAGG	-52902097	False	NA	NA	False	NA	NA	NA	52902204	52899793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52900066_52900587_52900684_52901158_52901220_52901863
WTC11_00019932	chr12	-	2239	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	198	0	-198	multi-exon	FALSE	canonical	3	89	junction_2	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAAGGCTGGGAGGC	-52948598	True	NA	NA	False	NA	NA	NA	52949874	52946811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949518_52949714
WTC11_00019933	chr12	-	592	3	FSM	ENSG00000170421.13	ENST00000549198.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGTCTGGTGGTGTG	-52948555	True	NA	NA	False	AAAAAG	-11	NA	52949831	52948483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949586_52949714
WTC11_00019934	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	24.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	-52948644	True	NA	-12	True	AATACA	-14	NA	52949920	52948650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949579_52949714
WTC11_00019937	chr12	-	1664	5	FSM	ENSG00000257337.8	ENST00000657514.2	1750	5	92	-6	31	0	multi-exon	FALSE	canonical	2	3	junction_1	8.13557004763649	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTTGGTTAATTTCCT	-53053947	False	NA	-9	True	AATAAA	-18	NA	53054353	53038966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53053395_53053575_53054320
WTC11_00019938	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-53054032	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
WTC11_00019941	chr12	-	2631	9	NNC	ENSG00000172819.17	novel	1836	8	NA	NA	0	72452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.903956196341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATTTATA	-53220125	False	331	NA	False	NA	NA	NA	53220259	53138114	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53138148_53210568_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
WTC11_00019944	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	58.8325191209968	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-53220125	False	331	NA	False	NA	NA	NA	53220259	53211330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
WTC11_00019945	chr12	-	1749	7	FSM	ENSG00000172819.17	ENST00000543726.1	1779	7	30	0	-6	0	multi-exon	FALSE	canonical	2	5	junction_6	119.587369269873	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTAGACTTCCCAGGG	-53220249	False	NA	NA	False	NA	NA	NA	53220383	53211392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53219949
WTC11_00019946	chr12	-	517	3	FSM	ENSG00000172819.17	ENST00000548317.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTCTTTTCGTCTTAG	-53215218	False	NA	NA	False	NA	NA	NA	53215352	53213939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53214236_53214445_53214607_53215292
WTC11_00019947	chr12	-	556	2	FSM	ENSG00000172819.17	ENST00000548284.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCATCAACAAGGTGACC	-53219950	False	NA	NA	False	NA	NA	NA	53220084	53215373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53215795_53219949
WTC11_00019948	chr12	-	586	4	FSM	ENSG00000172819.17	ENST00000551158.5	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	28.3901391331568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGGTCTCCGCCTTTCG	-53232549	False	NA	NA	False	NA	NA	NA	53232570	53227447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53227688_53231168_53231236_53231973_53232193_53232510
WTC11_00019951	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	2	7	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	-53300302	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53299130_53300142
WTC11_00019952	chr12	-	1665	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	117.361814725044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316746	True	NA	-7	True	AATAAA	-23	NA	53321588	53307459	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
WTC11_00019953	chr12	-	1818	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	-3	0	0	multi-exon	FALSE	canonical	3	335	junction_15	54.8826627148015	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACCAGTCTGTCTTTTC	-53316768	True	NA	-4	True	AATAAA	-26	NA	53321610	53307456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
WTC11_00019955	chr12	-	2262	14	FSM	ENSG00000094914.14	ENST00000547238.6	2248	14	0	-14	0	0	multi-exon	FALSE	canonical	3	354	junction_10	52.3638838452702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCCACCTCTAAGAATA	-53321246	False	321	-51	True	NA	NA	NA	53321257	53307503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315427_53315726_53315783_53320564
WTC11_00019958	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	23.7341784035133	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	-53499593	False	NA	NA	False	NA	NA	NA	53499615	53479668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
WTC11_00019959	chr12	-	5627	5	FSM	ENSG00000139625.13	ENST00000547020.1	5627	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	8.25757228245687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAGGGTTTTCTTGATG	-53486657	False	NA	-1	True	AATATA	-21	NA	53486728	53480489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53482212_53482298_53483724_53483910_53484021_53484256_53485215_53485316
WTC11_00019960	chr12	-	2832	14	FSM	ENSG00000139625.13	ENST00000547035.5	2944	14	112	0	112	0	multi-exon	FALSE	canonical	2	3	junction_13	25.4593306037865	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATATGCGCCAC	-53493640	False	NA	-7	True	TATAAA	-18	NA	53493754	53481121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487429_53493698
WTC11_00019965	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	47.4101150416708	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-53623752	True	NA	0	True	ATTAAA	-18	NA	53626382	53512053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
WTC11_00019967	chr12	-	531	6	FSM	ENSG00000170653.19	ENST00000588078.5	531	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	64.7067229891918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTGCCTCTCCA	-53625954	False	2630	NA	False	NA	NA	NA	53625971	53534605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53534660_53537414_53537553_53543296_53543449_53552540_53552638_53600952_53601022_53625950
WTC11_00019968	chr12	-	884	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	-110	0	110	multi-exon	FALSE	canonical	3	15	junction_3	64.3583716388164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACGGTGAAAGAACTATAA	-53625979	False	2630	NA	False	ATTAAA	-45	NA	53625996	53542776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
WTC11_00019969	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53623780	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
WTC11_00019970	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	4034	junction_4	804.124368490347	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	-53590281	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
WTC11_00019971	chr12	-	1977	4	FSM	ENSG00000135390.21	ENST00000495596.5	1976	4	0	-1	0	0	multi-exon	FALSE	canonical	3	5846	junction_1	31.1555238547945	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	-53673990	False	NA	-9	True	AATAAA	-17	NA	53674021	53665169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575
WTC11_00019972	chr12	-	1792	5	FSM	ENSG00000135390.21	ENST00000338662.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	2545.82465765025	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGACAAATAAATACT	-53676766	True	NA	1	True	NA	NA	NA	53677398	53665201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676175
WTC11_00019973	chr12	-	728	5	FSM	ENSG00000135390.21	ENST00000549748.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2393.72909912546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTGGGGAACGTGGTT	-53590280	True	NA	-36	True	NA	NA	NA	53676082	53665238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53670115_53672575_53672646_53676052
WTC11_00019980	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	88.6476170012483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187243	True	NA	-1	True	AATAAA	-29	NA	54188957	54180357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
WTC11_00019981	chr12	-	2592	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	22	-917	0	0	multi-exon	FALSE	canonical	3	78	junction_2	81	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187258	True	NA	-1	True	AATAAA	-29	NA	54188972	54180357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183655_54183960_54188950
WTC11_00019984	chr12	-	1586	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	-15	0	0	multi-exon	FALSE	canonical	3	49	junction_3	79.1243746684084	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187260	True	NA	-16	True	AATAAA	-34	NA	54188974	54181452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
WTC11_00019985	chr12	-	1721	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	19	-1113	0	0	multi-exon	FALSE	canonical	3	78	junction_3	66.1362230551458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187243	True	NA	-1	True	AATAAA	-29	NA	54188957	54180357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
WTC11_00019988	chr12	-	11566	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	-114	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.58805114252	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54258523	False	7564	NA	False	AAAAAG	-2	NA	54258541	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224208_54230946_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54258430
WTC11_00019990	chr12	-	11545	6	Fusion	ENSG00000283803.1_ENSG00000094916.16	novel	1832	5	NA	NA	0	6763	multi-exon	FALSE	non_canonical	0	0	junction_1	207.434423372785	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54252028	True	NA	NA	False	AAAAAG	-2	NA	54259592	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_54224208_54230940_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
WTC11_00019992	chr12	-	11571	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	0	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.589631026741	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54239718	True	NA	NA	False	AAAAAG	-2	NA	54280122	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224208_54230945_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00019993	chr12	-	11596	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	-9	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.589631026741	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54239738	True	NA	NA	False	AAAAAG	-2	NA	54280142	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224208_54230940_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00019994	chr12	-	11564	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	0	4905	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.589631026741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGATGAAGGAGTTGGA	-54239718	True	NA	NA	False	NA	NA	NA	54280122	54226036	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54226064_54230950_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00019995	chr12	-	11547	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	-1	0	1	multi-exon	FALSE	canonical	3	354	junction_4	41.3702791868752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAGTGGTGGTTTAAA	-54239718	True	NA	-6	True	AATAAA	-21	NA	54280122	54230940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00019998	chr12	-	2614	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	13	0	-13	multi-exon	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAACTTCCTTGATT	-54239729	True	NA	NA	False	AATAAA	-16	NA	54280133	54271853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54274342_54280007
WTC11_00019999	chr12	-	1660	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	-4	0	4	multi-exon	FALSE	canonical	3	18	junction_2	3.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCACTGTGTCTTCCTTC	-54300759	True	NA	-1	True	TATAAA	-19	NA	54301015	54292106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54293382_54295134_54295305_54300800
WTC11_00020000	chr12	-	1523	4	FSM	ENSG00000123405.14	ENST00000553070.5	1523	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.8423039781937	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCCAGAGGGGTGGAA	-54300759	True	NA	NA	False	NA	NA	NA	54301015	54292373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54293382_54295134_54295305_54300146_54300277_54300800
WTC11_00020003	chr12	-	2342	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	-11	0	4	multi-exon	FALSE	canonical	3	41	junction_7	17.8142341619142	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGACTCTGTCTTTGC	-54390179	True	NA	-1	True	AATAAA	-30	NA	54391298	54369128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
WTC11_00020009	chr12	-	1013	11	FSM	ENSG00000161638.11	ENST00000553071.1	1013	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	31.3146930369755	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACCTGGACCAGGATGG	-54419063	False	NA	NA	False	NA	NA	NA	54419127	54405193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54411833_54411965_54418980
WTC11_00020010	chr12	-	792	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	1	14	1	-10	multi-exon	FALSE	canonical	2	6	junction_5	2.28787565221539	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATACAGATTGCTTAAT	-54473529	True	NA	-19	True	AATAAA	-3	NA	54473601	54455970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
WTC11_00020011	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	27.0025718939676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-54586659	True	NA	-13	True	NA	NA	NA	54588659	54579245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
WTC11_00020012	chr12	-	653	6	NIC	ENSG00000135447.17	novel	1828	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	94.8527279523367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTCCTTCTTTTCCAA	-54586649	True	NA	-8	True	GATAAA	-19	NA	54588649	54580254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_54580393_54580943_54581051_54582731_54582796_54583210_54583249_54584259_54584321_54588404
WTC11_00020013	chr12	-	5352	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-368	2050	multi-exon	FALSE	canonical	3	293	junction_1	1333	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTCAACATCACTGGA	NA	False	NA	NA	False	AAAAAG	-4	NA	55415155	55409676	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55414181_55414256_55414512_55414562
WTC11_00020015	chr12	-	5343	2	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-307	2026	multi-exon	FALSE	canonical	3	2959	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	55415094	55409700	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55414512_55414562
WTC11_00020016	chr12	-	3061	1	FSM	ENSG00000179899.8	ENST00000554937.1	3061	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGTGGCCCTCTTGCA	-55414775	False	NA	NA	False	GATAAA	-15	NA	55414787	55411726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55411700_55414800
WTC11_00020017	chr12	-	4137	25	FSM	ENSG00000135424.19	ENST00000257879.11	4126	25	0	-11	0	11	multi-exon	TRUE	canonical	1	4	junction_21	23.415295036934	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTCTTGCTCTGGCATC	-55707636	True	NA	NA	False	ATTAAA	-30	NA	55707904	55684556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55699990_55700898_55701155_55702871_55702952_55703050_55703179_55707476
WTC11_00020018	chr12	-	4116	25	NIC	ENSG00000135424.19	novel	3930	26	NA	NA	0	96	intron_retention	FALSE	canonical	3	6	junction_21	23.2799612805138	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGATTTGGCAGGATCG	-55707616	True	NA	NA	False	NA	NA	NA	55707884	55684961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55700394_55700898_55701155_55702871_55702952_55703050_55703179_55707476
WTC11_00020019	chr12	-	1040	3	ISM	ENSG00000135424.19	ENST00000557058.2	3302	18	2022	10065	-1419	-1031	internal_fragment	FALSE	canonical	3	36	junction_2	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGGGGAACCCCATG	-55696405	False	NA	NA	False	NA	NA	NA	55696416	55694649	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_55694696_55694777_55695638_55696282
WTC11_00020021	chr12	-	1023	8	FSM	ENSG00000135404.12	ENST00000257857.9	1023	8	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_7	164.624619380342	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAGTGGGAGAAG	-55691958	True	NA	NA	False	NA	NA	NA	55729009	55725322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728952
WTC11_00020023	chr12	-	497	3	FSM	ENSG00000135404.12	ENST00000548117.5	499	3	0	2	0	-2	multi-exon	FALSE	canonical	3	2904	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGATGCTTGATTCCT	-55726317	False	NA	-9	True	ATTAAA	-45	NA	55726356	55725449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120
WTC11_00020024	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	2791	junction_3	136.235906508608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	-55728443	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
WTC11_00020025	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	990.426129687291	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
WTC11_00020026	chr12	-	682	7	FSM	ENSG00000135404.12	ENST00000552754.5	682	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	1091.21488106911	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGGAGTGGAATAGTAT	-55728310	False	NA	-94	True	NA	NA	NA	55728349	55725534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727271_55728275
WTC11_00020027	chr12	-	846	7	FSM	ENSG00000135404.12	ENST00000552164.5	845	7	0	-1	0	1	multi-exon	FALSE	canonical	3	63	junction_6	1082.41114595559	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATAACCCTGAGCAGG	-55691926	True	NA	NA	False	NA	NA	NA	55728977	55725810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728795
WTC11_00020028	chr12	-	1163	12	FSM	ENSG00000205323.9	ENST00000546604.5	1163	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	725.702475291788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTAGGGAGGAACA	-55777624	True	NA	NA	False	NA	NA	NA	55817724	55752462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
WTC11_00020029	chr12	-	997	11	FSM	ENSG00000205323.9	ENST00000552884.5	997	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	1020.60535467927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATGTTCAGAGGGG	-55777622	True	NA	NA	False	AATAAA	-16	NA	55817722	55752579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55803628_55803729_55817665
WTC11_00020030	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_1	157.957715860923	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-55777624	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
WTC11_00020031	chr12	-	475	2	FSM	ENSG00000205323.9	ENST00000552946.1	518	2	44	-1	44	0	multi-exon	FALSE	canonical	3	2338	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	NA	False	NA	-11	True	AATAAA	-19	NA	55760741	55757269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55757554_55760550
WTC11_00020033	chr12	-	2215	7	FSM	ENSG00000205323.9	ENST00000552207.1	2242	7	0	27	0	-27	multi-exon	FALSE	canonical	3	2589	junction_4	99.037731305913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACTAAAAATACAAAAAAAA	-55777620	True	NA	NA	False	NA	NA	NA	55817720	55792568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
WTC11_00020035	chr12	-	3620	7	FSM	ENSG00000135392.19	ENST00000546957.2	3618	7	0	-2	0	0	multi-exon	FALSE	canonical	3	42	junction_6	74.4238984914568	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	-55825708	True	NA	-29	True	TATAAA	-15	NA	55829603	55820984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829140
WTC11_00020038	chr12	-	1076	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	-3	0	2	multi-exon	FALSE	canonical	3	135	junction_2	353.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCCTCCTTATTTTCA	-55927100	False	10249	0	True	AATAAA	-19	NA	55927112	55901410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55902356_55903386_55903481_55927075
WTC11_00020039	chr12	-	1209	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	-2	0	2	multi-exon	FALSE	canonical	3	783	junction_2	29.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCCTCCTTATTTTCA	-55917645	True	NA	0	True	AATAAA	-19	NA	55927894	55901410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55902356_55903386_55903481_55927724
WTC11_00020040	chr12	-	890	4	FSM	ENSG00000170473.17	ENST00000302533.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	376.35355717729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGGACTTTCCCCC	-55927099	False	10249	NA	False	NA	NA	NA	55927111	55901686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55902356_55903386_55903481_55914275_55914367_55927075
WTC11_00020041	chr12	-	1230	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	-335	-242	-197	242	multi-exon	FALSE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTGGCCATCAGTATT	-55928079	False	NA	NA	False	NA	NA	NA	55928091	55913503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55914367_55927724
WTC11_00020042	chr12	-	884	3	FSM	ENSG00000170473.17	ENST00000454792.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGAATAAATGTGATTA	-55917626	True	NA	NA	False	AATAAA	-14	NA	55927875	55913825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55914367_55927075_55927268_55927724
WTC11_00020043	chr12	-	2128	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	-1	0	1	multi-exon	FALSE	canonical	3	24	junction_2	174.733511382333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	-55965975	False	NA	-7	True	AATAAA	-16	NA	55966022	55954103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
WTC11_00020044	chr12	-	1946	10	NIC	ENSG00000185664.15	novel	2126	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	16	junction_6	187.305454627817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55965977	False	NA	-8	True	AATAAA	-15	NA	55966024	55954104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55958472_55958608_55961316_55961464_55961621_55961733_55965935
WTC11_00020046	chr12	-	1869	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	-2	0	1	multi-exon	FALSE	canonical	3	16	junction_8	193.079606315633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	-55963152	True	NA	-7	True	AATAAA	-16	NA	55966042	55954103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
WTC11_00020052	chr12	-	604	1	FSM	ENSG00000237493.3	ENST00000552016.1	604	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCTGAGGACCCTTTC	NA	False	NA	NA	False	CATAAA	-19	NA	55981035	55980431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55980400_55981000
WTC11_00020053	chr12	-	5090	29	FSM	ENSG00000139613.12	ENST00000550164.6	5090	29	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	75.7901489883314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	-56183990	True	NA	1	True	TATAAA	-21	NA	56189483	56162358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
WTC11_00020054	chr12	-	4271	30	FSM	ENSG00000139613.12	ENST00000394023.7	4271	30	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	84.922472862878	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGTCAGCGTATGTG	-56184074	True	NA	-10	True	TTTAAA	-13	NA	56189567	56162982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
WTC11_00020056	chr12	-	5448	28	NIC	ENSG00000139613.12	novel	5090	29	NA	NA	-712	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	57.8537961450678	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	-56189293	True	NA	1	True	TATAAA	-21	NA	56190279	56162358	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
WTC11_00020059	chr12	-	3839	29	FSM	ENSG00000139613.12	ENST00000347471.8	3839	29	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	86.3378139186122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGATTTTAAAAAGCCA	-56184055	True	NA	NA	False	ATTAAA	-13	NA	56189548	56163329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
WTC11_00020065	chr12	-	5588	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	5	0	-5	multi-exon	FALSE	canonical	3	78	junction_6	28.7909129182572	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGACTTTGATACAC	-56217757	True	NA	NA	False	AGTAAA	-20	NA	56221922	56202183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
WTC11_00020071	chr12	-	542	3	FSM	ENSG00000139645.11	ENST00000548081.1	556	3	14	0	14	0	multi-exon	TRUE	canonical	3	37	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGACGTCAACTACCAG	-56253455	False	NA	NA	False	NA	NA	NA	56255070	56254086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56254280_56254577_56254721_56254864
WTC11_00020072	chr12	-	515	3	FSM	ENSG00000139645.11	ENST00000681390.1	1076	3	0	561	0	-215	multi-exon	FALSE	canonical	3	32	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTTCCCTTTTCTTAC	-56257481	False	NA	NA	False	NA	NA	NA	56257496	56255754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56255985_56257014_56257086_56257282
WTC11_00020074	chr12	-	2932	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	-17	0	17	multi-exon	FALSE	canonical	3	869	junction_3	63.3719180710194	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGCCTGGAAGAACCTT	-56282602	True	NA	17	True	AATAAA	-35	NA	56300330	56271681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
WTC11_00020075	chr12	-	3076	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	-19	0	17	multi-exon	FALSE	canonical	3	19	junction_11	366.741267141828	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGCCTGGAAGAACCTT	-56282663	True	NA	17	True	AATAAA	-35	NA	56300391	56271681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
WTC11_00020089	chr12	-	636	3	FSM	ENSG00000062485.19	ENST00000551441.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACCATCCATCTCCAGA	-56282605	True	NA	NA	False	NA	NA	NA	56300333	56286266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56286646_56298608_56298692_56300159
WTC11_00020090	chr12	-	2007	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	-59	-498	0	496	multi-exon	FALSE	canonical	3	1300	junction_2	129.74035609632	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGACTTCGTGATCC	-56315872	False	NA	NA	False	NA	NA	NA	56316047	56309345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
WTC11_00020094	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_2	36	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-56315872	False	NA	-14	True	AATAAA	-29	NA	56316047	56314489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56314967_56315129_56315243_56315820
WTC11_00020097	chr12	-	5267	26	FSM	ENSG00000135473.16	ENST00000610546.4	5301	26	34	0	-13	0	multi-exon	TRUE	canonical	3	37	junction_13	26.0828219332188	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACTCCTATTCTACG	-56332745	True	NA	NA	False	NA	NA	NA	56334019	56316222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324036_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
WTC11_00020098	chr12	-	4601	26	FSM	ENSG00000135473.16	ENST00000425394.7	4592	26	2	-11	2	0	multi-exon	FALSE	canonical	0	0	junction_25	35.9100208855411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	-56332417	False	NA	-6	True	AATAAA	-29	NA	56333691	56316935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324036_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333486
WTC11_00020106	chr12	-	4398	30	NNC	ENSG00000111602.12	novel	5158	29	NA	NA	0	75528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.936378523507	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCCAATTGTCCTTTGA	-56438781	True	NA	NA	False	AAAAAG	-1	NA	56449403	56340834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56340865_56417129_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
WTC11_00020115	chr12	-	328	1	FSM	ENSG00000274569.1	ENST00000620583.1	399	1	179	-108	179	108	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGAGCCCCGCCCCCT	-56413854	False	NA	NA	False	NA	NA	NA	56413866	56413538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56413500_56413900
WTC11_00020116	chr12	-	5158	29	FSM	ENSG00000111602.12	ENST00000553532.6	5158	29	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_23	66.6855532345956	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACTTTTCATTTTTA	-56438804	True	NA	0	True	AGTAAA	-24	NA	56449426	56416362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
WTC11_00020117	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_23	109.831039068458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	-56438781	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
WTC11_00020121	chr12	-	4266	18	FSM	ENSG00000135517.9_ENSG00000135423.13	ENST00000311966.9	2387	18	32	-1911	0	1903	multi-exon	FALSE	canonical	3	55	junction_14	13.0253944145265	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCGGGCAGAGCAAAAA	-56487379	True	NA	NA	False	NA	NA	NA	56488129	56469040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
WTC11_00020123	chr12	-	2520	18	FSM	ENSG00000135423.13	ENST00000486433.5	2694	18	174	0	26	0	multi-exon	FALSE	canonical	1	1	junction_9	23.0035351578358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTGCTAAACCCAGTC	-56488125	False	NA	-13	True	AATAAA	-16	NA	56488223	56470953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475184_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
WTC11_00020124	chr12	-	538	3	FSM	ENSG00000135423.13	ENST00000491880.1	514	3	0	-24	0	0	multi-exon	FALSE	canonical	2	2	junction_2	39	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	-56487501	False	NA	NA	False	AATATA	-44	NA	56487599	56479568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56479902_56480287_56480388_56487494
WTC11_00020132	chr12	-	1752	11	NNC	ENSG00000110955.9	novel	1759	10	NA	NA	0	29307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.12634352332	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCACGGTGGCTCACG	-56550365	True	NA	NA	False	NA	NA	NA	56645955	56608867	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56608893_56638177_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
WTC11_00020137	chr12	-	863	3	FSM	ENSG00000110955.9	ENST00000550162.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	5131	junction_2	268.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTGTCCGGAAAGTCAA	-56547588	False	NA	NA	False	NA	NA	NA	56643178	56639958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56640193_56642457_56642581_56642672
WTC11_00020138	chr12	-	1085	7	FSM	ENSG00000110955.9	ENST00000552959.5	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_6	1881.46402806136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTGCAGGTGAGTATA	-56550365	True	NA	NA	False	NA	NA	NA	56645955	56639990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645836
WTC11_00020140	chr12	-	2931	8	FSM	ENSG00000110958.16	ENST00000537473.2	2939	8	0	8	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1499.57078212809	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56687987	False	52864	-16	True	AATAAA	-24	NA	56687997	56663348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56665631_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
WTC11_00020141	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_5	88.4044508991233	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56635420	True	NA	-16	True	AATAAA	-24	NA	56688284	56663348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
WTC11_00020142	chr12	-	2071	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	6	0	0	multi-exon	FALSE	canonical	2	17	junction_7	1435.19658387797	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56688398	False	NA	-16	True	AATAAA	-24	NA	56688408	56663348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
WTC11_00020143	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	1215.61901241028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	-56635423	True	NA	13	True	TTTAAA	-22	NA	56688287	56663612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
WTC11_00020145	chr12	-	1088	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	19	0	-19	multi-exon	FALSE	canonical	2	82	junction_6	4066.13426842854	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCTCATTTGATAAGGT	-56633103	True	NA	87	True	AAAAAG	-31	NA	56725269	56712335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
WTC11_00020146	chr12	-	915	8	FSM	ENSG00000196531.14	ENST00000546862.6	934	8	0	19	0	-19	multi-exon	FALSE	canonical	3	27	junction_6	3808.71697289151	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCTCATTTGATAAGGT	-56633143	True	NA	87	True	AAAAAG	-31	NA	56725309	56712335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714704_56724451_56724524_56725262
WTC11_00020147	chr12	-	913	8	FSM	ENSG00000196531.14	ENST00000679092.1	932	8	0	19	0	-19	multi-exon	FALSE	canonical	3	479	junction_6	3657.92320915593	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCTCATTTGATAAGGT	-56633169	True	NA	87	True	AAAAAG	-31	NA	56725335	56712335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714676_56724451_56724524_56725262
WTC11_00020148	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	4094.68373829612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
WTC11_00020149	chr12	-	2692	8	FSM	ENSG00000196531.14	ENST00000356769.7	2690	8	0	-2	0	2	multi-exon	FALSE	canonical	3	7865	junction_7	1138.91036360485	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCGGTGACTGGTCTC	NA	False	NA	-8	True	AATAAA	-24	NA	56727197	56712430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56725262
WTC11_00020150	chr12	-	1491	6	FSM	ENSG00000196531.14	ENST00000676873.1	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	10249	junction_1	451.446829648852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56623331	False	NA	-12	True	AATAAA	-20	NA	56715497	56712434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601
WTC11_00020151	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_7	3427.68182506451	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633101	True	NA	-12	True	AATAAA	-20	NA	56725267	56712434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
WTC11_00020152	chr12	-	2283	5	FSM	ENSG00000196531.14	ENST00000548386.6	2283	5	0	0	0	0	multi-exon	FALSE	canonical	3	10654	junction_2	327.250954926032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGAATTCAGTCGGTG	-56716046	False	NA	-17	True	AATAAA	-15	NA	56716061	56712439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601
WTC11_00020153	chr12	-	827	8	FSM	ENSG00000196531.14	ENST00000548563.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	4881.73633379078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGAATTCAGTCGGTG	-56633133	True	NA	-17	True	AATAAA	-15	NA	56725299	56712439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714704_56724451_56724550_56725262
WTC11_00020154	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_7	3739.08155261996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	-56725501	False	NA	-27	True	NA	NA	NA	56725516	56712503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
WTC11_00020160	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	125.560377046358	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-56744978	True	NA	NA	False	NA	NA	NA	56752374	56731295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
WTC11_00020161	chr12	-	1423	13	FSM	ENSG00000198056.15	ENST00000338193.11	1423	13	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_9	63.4487435301563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTGAAAAGATTTCC	-56744927	True	NA	32	True	AGTAAA	-18	NA	56752323	56731579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
WTC11_00020162	chr12	-	590	4	FSM	ENSG00000198056.15	ENST00000548173.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_1	66.5482281256734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGGAGAGGTGTTCAT	-56744943	True	NA	NA	False	NA	NA	NA	56752339	56746145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56746182_56746780_56747033_56751037_56751196_56752195
WTC11_00020166	chr12	-	5372	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	-2	0	2	multi-exon	FALSE	canonical	3	22	junction_5	56.8330889535313	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGTCTTTCTTAATGAA	-57073228	True	NA	-1	True	AATAAA	-16	NA	57078763	57055640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
WTC11_00020168	chr12	-	3963	22	FSM	ENSG00000166888.12	ENST00000300134.8	3963	22	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_21	14.0084198846408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACGCTCTAACTGCTC	-57108746	True	NA	NA	False	AATAAA	-26	NA	57111362	57095407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
WTC11_00020170	chr12	-	3380	21	FSM	ENSG00000166888.12	ENST00000554764.6	3380	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_19	30.4704364917866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGCATGACCACATAG	-57108746	True	NA	-20	True	NA	NA	NA	57111362	57095851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57108162_57108300_57111128
WTC11_00020171	chr12	-	3124	22	FSM	ENSG00000166888.12	ENST00000543873.6	3119	22	0	-5	0	0	multi-exon	FALSE	canonical	1	3	junction_21	30.7879147005765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGGAGGGGGGCTGGG	-57110278	False	2616	NA	False	NA	NA	NA	57110306	57096242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110076
WTC11_00020172	chr12	-	3037	22	FSM	ENSG00000166888.12	ENST00000454075.7	3037	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	29.6208083996611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTTCCAGCACTGACT	-57108758	True	NA	NA	False	NA	NA	NA	57111374	57096364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111109
WTC11_00020183	chr12	-	4857	24	FSM	ENSG00000179912.21	ENST00000402412.6	4411	24	5	-451	5	449	multi-exon	TRUE	canonical	3	40	junction_13	12.3803918386857	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCTCCCGTGTTCAAG	-57430989	True	NA	NA	False	NA	NA	NA	57431038	57253312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57292571_57292668_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
WTC11_00020184	chr12	-	4104	24	FSM	ENSG00000179912.21	ENST00000634871.1	4092	24	0	-12	0	0	multi-exon	FALSE	canonical	1	5	junction_21	24.0016540072776	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCACTGTTTCTCTG	-57430140	True	NA	-8	True	TATAAA	-21	NA	57430808	57253763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57305639_57305664_57310263_57310464_57395748_57395819_57430719
WTC11_00020187	chr12	-	398	3	FSM	ENSG00000123329.20	ENST00000546704.1	552	3	0	154	0	-154	multi-exon	FALSE	canonical	3	25	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTACATGGAAGACCCT	-57475116	False	NA	NA	False	NA	NA	NA	57475140	57474422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57474477_57474625_57474704_57474874
WTC11_00020189	chr12	-	872	4	FSM	ENSG00000175197.13	ENST00000547303.5	872	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.7480157480236	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTTACTTTTTCTTCT	-57519988	True	NA	-4	True	ATTAAA	-20	NA	57520492	57516587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57517181_57517268_57517425_57517705_57517754_57520417
WTC11_00020191	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	-57520007	True	NA	NA	False	NA	NA	NA	57520511	57516808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57517181_57517268_57517754_57520417
WTC11_00020193	chr12	-	3655	12	FSM	ENSG00000175203.17	ENST00000679307.1	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_10	34.0781794415369	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAACTGAGCCTGTT	-57529802	False	NA	NA	False	NA	NA	NA	57537343	57529632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748
WTC11_00020194	chr12	-	4924	6	FSM	ENSG00000175203.17	ENST00000676956.1	4924	6	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	36.5239647354993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCAAGTACAAAACAGAAT	-57529805	False	NA	71	True	NA	NA	NA	57537346	57530078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532644_57532732_57532811_57532983_57533304_57533952_57534098_57534291
WTC11_00020195	chr12	-	1500	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	15	458	0	108	multi-exon	FALSE	canonical	3	488	junction_10	33.5684410821592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGTTGGTTATCATCAGA	-57539636	True	NA	NA	False	AATACA	-12	NA	57547177	57530508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
WTC11_00020205	chr12	-	1189	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	18	-111	0	0	multi-exon	FALSE	canonical	3	24	junction_3	110.907619215273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	-57768285	True	NA	88	True	NA	NA	NA	57772101	57768470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
WTC11_00020211	chr12	-	4400	3	FSM	ENSG00000207789.1_ENSG00000175215.11	ENST00000547169.5	1340	3	-78	-2982	71	18	multi-exon	FALSE	canonical	3	292	junction_2	16	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGGCCCTTAAGTGTT	-57824611	False	NA	14	True	TTTAAA	-34	NA	57824621	57819908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57823728_57823903_57824090_57824226
WTC11_00020214	chr12	-	797	4	FSM	ENSG00000175215.11	ENST00000549039.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	151.078346121033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTGTTGTAAGGCCT	-57826392	False	NA	NA	False	NA	NA	NA	57826402	57823182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57823728_57823903_57824006_57824226_57824320_57826345
WTC11_00020215	chr12	-	544	6	FSM	ENSG00000175215.11	ENST00000550144.1	544	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	121.617432960904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCATCCTGGACAACTC	NA	False	NA	NA	False	NA	NA	NA	57829550	57823957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827533_57827591_57829447
WTC11_00020216	chr12	-	436	2	FSM	ENSG00000175215.11	ENST00000552294.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTATAGAGATTGAGGG	-57827397	False	NA	NA	False	NA	NA	NA	57827407	57826378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57826403_57826995
WTC11_00020217	chr12	-	1771	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	175	268	-4	-111	multi-exon	FALSE	canonical	3	89	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCGCTTGAACCTGGGA	NA	False	NA	NA	False	NA	NA	NA	57936170	57930382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935469_57935554_57935838
WTC11_00020218	chr12	-	535	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	-81	-3	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGGGTTTTACCTGGAT	NA	False	NA	-1	True	AATAAA	-17	NA	57936160	57931524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935838
WTC11_00020220	chr12	-	4114	19	FSM	ENSG00000139263.12	ENST00000320743.8	4046	19	-64	-4	-64	-2	multi-exon	TRUE	canonical	3	33	junction_13	8.10673397876538	775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCCATTTATACAATAA	-58920239	True	NA	-15	True	AATAAA	-19	NA	58920568	58872150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919999
WTC11_00020222	chr12	-	2327	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCATGTTGGTCAGGCT	-59297175	True	NA	NA	False	NA	NA	NA	59328597	59318892	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_59320979_59328356
WTC11_00020223	chr12	-	2737	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	32	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAAAACAAATGACAGT	-59297187	True	NA	-112	True	NA	NA	NA	59328609	59319363	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_59320979_59326402_59327272_59328356
WTC11_00020224	chr12	-	513	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	105	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59297187	True	NA	-9	True	AATAAA	-13	NA	59328609	59321923	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_59322184_59328356
WTC11_00020226	chr12	-	6465	10	FSM	ENSG00000111110.12	ENST00000228705.7	6454	10	0	-11	0	11	multi-exon	FALSE	canonical	3	123	junction_6	10.1446330760118	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTCTGTCTTTTCTA	-62933246	True	NA	3	True	AATAAA	-37	NA	62935150	62643982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_62648637_62667177_62667330_62689698_62689807_62693935_62694000_62720170_62720290_62737501_62737587_62788225_62788339_62801815_62802161_62832113_62832280_62934491
WTC11_00020227	chr12	-	7805	6	FSM	ENSG00000177990.12	ENST00000413230.6	1339	6	-5228	-1238	-5228	-45	multi-exon	FALSE	canonical	3	22	junction_2	5.72712842531054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTTATGCATTAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	63589390	63558957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_63560663_63569223_63569350_63570757_63570858_63580661_63580837_63582405_63582526_63583811
WTC11_00020228	chr12	-	730	2	FSM	ENSG00000177990.12	ENST00000541911.1	850	2	120	0	120	0	multi-exon	FALSE	canonical	3	38	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTACCTCTGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	63569349	63560058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_63560663_63569223
WTC11_00020229	chr12	-	8890	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	31	-4762	0	-2	multi-exon	FALSE	canonical	3	35	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGATGTAAGTGTTT	-64221176	True	NA	NA	False	ATTAAA	-13	NA	64222265	64186317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64194659_64215677_64215964_64222002
WTC11_00020231	chr12	-	1056	8	FSM	ENSG00000185306.13	ENST00000536975.5	1059	8	3	0	3	0	multi-exon	FALSE	canonical	3	6	junction_5	9.84782167977948	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293196	True	NA	NA	False	AATAAA	-16	NA	64293380	64266982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64293280
WTC11_00020233	chr12	-	5252	5	ISM	ENSG00000135677.11	ENST00000541781.5	1846	11	15785	-3163	-1235	-1	3prime_fragment	FALSE	canonical	3	149	junction_1	9.66953980290686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCCTTTGTTTTA	NA	False	NA	-2	True	ATTAAA	-20	NA	64730453	64713445	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955
WTC11_00020237	chr12	-	1976	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	1	0	-1	multi-exon	FALSE	canonical	2	7	junction_2	3.31476308670584	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTGTGGAGGTGATC	-65121185	False	NA	NA	False	AATAAA	-21	NA	65121305	65050626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
WTC11_00020241	chr12	-	2881	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	-5	0	5	multi-exon	FALSE	canonical	3	554	junction_1	49.421374143403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACATCTTGCACCGCC	-66164676	True	NA	NA	False	NA	NA	NA	66169996	66135840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
WTC11_00020242	chr12	-	859	7	NNC	ENSG00000155957.19	novel	2876	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.416595049835	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATCTTTATTTGTATC	-66164643	True	NA	-12	True	AATAAA	-25	NA	66169963	66137828	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_66138166_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
WTC11_00020246	chr12	-	1298	1	FSM	ENSG00000225422.4	ENST00000417216.3	1156	1	-27	-115	-27	115	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGAAAACGTTATT	NA	False	NA	NA	False	NA	NA	NA	66235261	66233963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66234000_66235300
WTC11_00020247	chr12	-	7568	24	NIC	ENSG00000155974.13	novel	5147	25	NA	NA	0	2580	combination_of_known_junctions	TRUE	canonical	2	15	junction_22	7.77738469316045	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAAGAAATTTAATCAGT	-67069146	False	NA	NA	False	AATACA	-10	NA	67069162	66344850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_66349247_66353416_66353564_66371693_66371928_66377173_66377286_66379279_66379437_66392307_66392503_66392676_66392817_66394207_66394353_66406282_66406429_66420719_66420790_66432547_66432629_66444583_66444730_66445321_66445509_66455408_66455565_66456186_66456343_66462923_66463094_66465274_66465423_66515618_66515765_66517900_66517977_66529830_66529915_66539077_66539224_66541814_66541951_66596846_66596928_67069049
WTC11_00020248	chr12	-	2980	19	FSM	ENSG00000155974.13	ENST00000538164.5	2980	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	7.1145824860365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGTATATGGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	66517922	66348824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66349247_66353416_66353564_66371693_66371928_66377173_66377286_66379279_66379437_66392307_66392503_66392676_66392817_66394207_66394353_66406282_66406429_66420719_66420790_66432547_66432629_66444583_66444730_66445321_66445509_66455408_66455565_66456186_66456343_66462923_66463094_66465274_66465423_66515618_66515765_66517900
WTC11_00020254	chr12	-	1022	1	FSM	ENSG00000240087.3	ENST00000435879.2	888	1	-55	-79	-55	79	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATTTGACTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	68553937	68552915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68552900_68553900
WTC11_00020255	chr12	-	307	1	FSM	ENSG00000234040.3	ENST00000427342.3	318	1	89	-78	89	78	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAAAAAAAAAACAC	NA	False	NA	NA	False	AATAAA	-37	NA	68627098	68626791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68626800_68627100
WTC11_00020257	chr12	-	5254	2	FSM	ENSG00000257815.8	ENST00000656495.2	5241	2	7	-20	0	20	multi-exon	FALSE	canonical	3	40	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACCTTAATAAGATGT	-70242664	True	NA	NA	False	AATAAA	-5	NA	70243379	70237953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_70242894_70243065
WTC11_00020261	chr12	-	834	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-307	-62812	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	33	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTCCGTGTGACCTC	-71117159	True	NA	-4	True	AATAAA	-19	NA	71118554	71110213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_71110454_71115849_71115959_71118069
WTC11_00020264	chr12	-	7597	34	FSM	ENSG00000133858.17	ENST00000552994.5	7597	34	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_23	13.2804045874179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAGTTAATATTTGA	-71662848	True	NA	-41	True	AATAAA	-13	NA	71663819	71609697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71610566_71610694_71610758_71611057_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
WTC11_00020266	chr12	-	746	2	FSM	ENSG00000133858.17	ENST00000551487.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTTTCTTTGAAGGA	NA	False	NA	NA	False	AAAAAG	-8	NA	71613748	71611555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71611888_71613334
WTC11_00020267	chr12	-	498	2	FSM	ENSG00000133858.17	ENST00000546606.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTCAAGCAGAGAGCGA	-71633076	False	NA	-148	True	AAGAAA	-25	NA	71633091	71632222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71632515_71632885
WTC11_00020268	chr12	-	883	1	FSM	ENSG00000257802.1	ENST00000550293.1	1201	1	-58	376	-58	-376	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGATGATTCACAAAGT	NA	False	NA	NA	False	NA	NA	NA	71850486	71849603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71849600_71850500
WTC11_00020269	chr12	-	1054	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	2034	0	-2034	multi-exon	FALSE	canonical	2	5	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGCAGCTATAAAAGAGA	-72272217	False	NA	NA	False	NA	NA	NA	72272236	72261610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_72262111_72264481_72264622_72271822
WTC11_00020270	chr12	-	930	1	FSM	ENSG00000273987.1	ENST00000617300.1	689	1	-247	6	-247	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAATTTGAAGTTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	75334733	75333803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75333800_75334700
WTC11_00020271	chr12	-	1702	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	-493	0	493	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	-75390376	True	NA	NA	False	NA	NA	NA	75390910	75359390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75361020_75390837
WTC11_00020272	chr12	-	10107	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	-3	0	3	multi-exon	FALSE	canonical	3	185	junction_9	14.8099065943487	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTCCACTTTGTGGT	-75505886	True	NA	NA	False	AATAAA	-17	NA	75511609	75490859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
WTC11_00020276	chr12	-	694	3	FSM	ENSG00000111615.14	ENST00000550898.1	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGCTTATTGGTCCCAA	-75505913	True	NA	NA	False	AATAAA	-22	NA	75511636	75506519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75506917_75508273_75508447_75511512
WTC11_00020277	chr12	-	5925	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	-12	0	12	multi-exon	FALSE	canonical	3	628	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGGCCTTGTTCAACTG	-76031753	False	NA	-3	True	AATAAA	-34	NA	76031776	76025434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76030093_76030509
WTC11_00020278	chr12	-	13166	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	-7	0	7	multi-exon	FALSE	canonical	3	1680	junction_9	366.031698192428	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTCTTTAAGCCAGTA	-76046228	True	NA	NA	False	ATTAAA	-26	NA	76084685	76036577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
WTC11_00020279	chr12	-	4885	13	ISM	ENSG00000187109.15	ENST00000618691.5	13159	15	15693	8116	1	2203	3prime_fragment	FALSE	canonical	3	1680	junction_9	358.443161463572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACAAAAATTAAGTTATT	-76068894	False	NA	37	True	NA	NA	NA	76068992	76044700	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908
WTC11_00020280	chr12	-	3991	14	FSM	ENSG00000187109.15	ENST00000552056.5	1981	14	0	-2010	0	2010	multi-exon	FALSE	canonical	3	501	junction_1	581.417783571551	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTCTTGGACTGATTG	-76068895	False	NA	-12	True	ATTAAA	-35	NA	76068993	76044893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908
WTC11_00020281	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	464.707774365305	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	-76046209	True	NA	51	True	NA	NA	NA	76084666	76047154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
WTC11_00020284	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	690.088883164094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	-76046272	True	NA	6	True	NA	NA	NA	76084729	76047631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
WTC11_00020286	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	671.479405280591	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-76046155	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
WTC11_00020287	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_7	391.066170871376	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-76046228	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
WTC11_00020290	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	739.088560881878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	-76046209	True	NA	-32	True	AAAACA	-44	NA	76084666	76049588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
WTC11_00020295	chr12	-	7614	23	FSM	ENSG00000091039.17	ENST00000393250.8	3157	23	61	-4518	0	479	multi-exon	FALSE	canonical	3	62	junction_21	39.1850873978886	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAAGGGTTTTTTTTTC	-76554916	True	NA	NA	False	ATTAAA	-16	NA	76559748	76351317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76559396
WTC11_00020297	chr12	-	7126	23	NIC	ENSG00000091039.17	novel	7204	24	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_21	39.6785898926331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGATCAAGTGACTTTTA	-76554898	True	NA	0	True	AATAAA	-19	NA	76559730	76351796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76559396
WTC11_00020302	chr12	-	895	7	NNC	ENSG00000175183.10	novel	910	7	NA	NA	0	496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.210796304098	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTAGGCAACAGGCAT	-76853648	True	NA	NA	False	NA	NA	NA	76878985	76858212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_76858241_76858715_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
WTC11_00020303	chr12	-	930	7	NNC	ENSG00000175183.10	novel	908	6	NA	NA	0	496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.210796304098	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTAGGCAACAGGCAT	-76853682	True	NA	NA	False	NA	NA	NA	76879019	76858212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_76858241_76858714_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
WTC11_00020304	chr12	-	924	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	-16	0	16	multi-exon	FALSE	canonical	3	1484	junction_5	67.5988165576884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATCTTTTGGAGGAGAT	-76853682	True	NA	1	True	AATAAA	-35	NA	76879019	76858692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
WTC11_00020305	chr12	-	5078	3	FSM	ENSG00000175183.10	ENST00000548783.1	5078	3	0	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTGTTCATTGTCTT	-76864628	False	NA	-22	True	AATAAA	-12	NA	76864954	76858715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283
WTC11_00020306	chr12	-	910	7	FSM	ENSG00000175183.10	ENST00000552330.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	736.274273321807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	-76853654	True	NA	NA	False	NA	NA	NA	76878991	76858828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76862809_76862960_76863175_76863345_76866148_76866262_76878937
WTC11_00020307	chr12	-	767	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	-13	0	0	multi-exon	FALSE	canonical	3	114	junction_5	607.896043744323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	-76853686	True	NA	NA	False	NA	NA	NA	76879023	76858828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
WTC11_00020310	chr12	-	998	2	Genic_Genomic	ENSG00000257199.2	novel	591	1	NA	NA	-60	54150	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATTATGTGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	76984729	76929928	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_76929968_76983770
WTC11_00020311	chr12	-	591	1	FSM	ENSG00000257199.2	ENST00000552481.2	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTCTTATTTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	76984669	76984078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76984100_76984700
WTC11_00020313	chr12	-	5302	12	FSM	ENSG00000165891.16	ENST00000416496.6	5297	12	0	-5	0	5	multi-exon	FALSE	canonical	2	7	junction_1	30.0729141469405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGTATTTTTTGGTA	-77061180	True	NA	4	True	AATAAA	-24	NA	77065563	77021242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_77024186_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
WTC11_00020316	chr12	-	9066	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	407	-2	24	2	3prime_fragment	FALSE	canonical	3	840	junction_2	54.5563928426358	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTGTATGTGTT	-79668059	True	NA	-3	True	AATAAA	-21	NA	79690557	79584876	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
WTC11_00020317	chr12	-	1573	4	FSM	ENSG00000177425.11	ENST00000551712.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	430.616096102111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATGATGCCGTTTA	-79690070	False	22498	NA	False	NA	NA	NA	79690080	79603667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79604722_79613574_79613610_79621075_79621208_79689728
WTC11_00020322	chr12	-	5707	25	FSM	ENSG00000058272.19	ENST00000450142.7	5620	25	-87	0	-54	0	multi-exon	FALSE	canonical	3	243	junction_13	73.4221053604128	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	-79935170	False	NA	-4	True	CATAAA	-18	NA	79935184	79773567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
WTC11_00020323	chr12	-	5530	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	-244	-2361	-45	0	multi-exon	FALSE	canonical	3	169	junction_12	77.6252448559191	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	-79935161	False	NA	-4	True	CATAAA	-18	NA	79935175	79773567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
WTC11_00020324	chr12	-	312	3	FSM	ENSG00000058272.19	ENST00000547253.5	676	3	368	-4	368	0	multi-exon	FALSE	canonical	3	425	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTAATGGAATTGCACAT	-79781949	False	NA	NA	False	AATAAA	-15	NA	79781973	79775913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79776016_79778549_79778601_79781814
WTC11_00020328	chr12	-	223	1	FSM	ENSG00000277130.1	ENST00000619055.1	682	1	326	133	326	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACAGCTTAATTTGACA	-79819109	False	NA	NA	False	NA	NA	NA	79819139	79818916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79818900_79819100
WTC11_00020333	chr12	-	527	3	FSM	ENSG00000111052.8	ENST00000552093.1	546	3	0	19	0	-19	multi-exon	FALSE	canonical	3	42	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAGCTGCAATCTAAT	NA	False	NA	-17	True	ATTAAA	-3	NA	80889348	80845582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_80845940_80848250_80848323_80889250
WTC11_00020335	chr12	-	992	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	-8	0	0	multi-exon	FALSE	canonical	3	141	junction_3	122.335603975294	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCTATCAATGAAGCA	-82357903	True	NA	NA	False	AATAAA	-19	NA	82358786	82352838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
WTC11_00020338	chr12	-	728	2	Antisense	novelGene_ENSG00000257296.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAATGCTCATGTTTTC	-84689273	True	NA	NA	False	AATAAA	-25	NA	84689756	84666035	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_84666620_84689612
WTC11_00020343	chr12	-	4272	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	40	0	3	0	multi-exon	FALSE	canonical	3	175	junction_3	24.8130510014387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	-84910124	True	NA	-1	True	AATAAA	-22	NA	84912836	84880844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
WTC11_00020345	chr12	-	1838	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	3	-10	3	10	multi-exon	FALSE	canonical	3	182	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAACCCTACATCAAATA	-84910124	True	NA	NA	False	NA	NA	NA	84912836	84890784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_84892309_84912522
WTC11_00020348	chr12	-	7824	54	FSM	ENSG00000198707.17	ENST00000552810.6	7824	54	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_31	9.22639580196308	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	-88140990	True	NA	NA	False	AATAAA	-27	NA	88142088	88049015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88054339_88054414_88055575_88055718_88058847_88059021_88059897_88060021_88060829_88060995_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88103012_88106674_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
WTC11_00020352	chr12	-	5886	2	FSM	ENSG00000139323.14	ENST00000549591.1	5840	2	-46	0	-46	0	multi-exon	FALSE	canonical	3	121	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	89429506	89419717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89421258_89425160
WTC11_00020353	chr12	-	3091	10	FSM	ENSG00000139323.14	ENST00000393179.8	3096	10	0	5	0	-5	multi-exon	FALSE	canonical	3	53	junction_9	22.724327530829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTGTTCCTTTTCTT	-89524315	False	NA	NA	False	AATAAA	-20	NA	89525615	89419722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119
WTC11_00020354	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	23.8490431569934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524747	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
WTC11_00020357	chr12	-	6169	3	FSM	ENSG00000259075.6	ENST00000548729.5	5436	3	0	-733	0	733	multi-exon	FALSE	canonical	3	8	junction_1	55	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAGAACGCTAACAGA	NA	False	NA	NA	False	NA	NA	NA	89526198	89518674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89524441_89525119_89525205_89525880
WTC11_00020358	chr12	-	7907	21	FSM	ENSG00000070961.16	ENST00000428670.8	7062	21	0	-845	0	845	multi-exon	FALSE	canonical	3	55	junction_20	38.2480064839986	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACTAAAAATCTGAAAAATA	-89708823	False	NA	NA	False	AATAAA	-32	NA	89708838	89587203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
WTC11_00020359	chr12	-	486	3	FSM	ENSG00000070961.16	ENST00000550716.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	110	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCCCAACAAAAATAACAAT	-89603139	False	NA	NA	False	NA	NA	NA	89603152	89591102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89591296_89599116_89599300_89603042
WTC11_00020361	chr12	-	4629	2	FSM	ENSG00000133639.6	ENST00000256015.5	4629	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTGTTATTTATGA	-92144307	True	NA	NA	False	AATAAA	-15	NA	92145846	92140277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_92144448_92145387
WTC11_00020365	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2646	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-93413627	True	NA	-15	True	ATTAAA	-17	NA	93441943	93408370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93411300_93441854
WTC11_00020368	chr12	-	765	1	FSM	ENSG00000186076.5	ENST00000548270.1	765	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGGCGGGGAGGATACT	NA	False	NA	NA	False	NA	NA	NA	93641586	93640821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93640800_93641600
WTC11_00020369	chr12	-	449	2	FSM	ENSG00000258365.1	ENST00000551941.1	796	2	281	66	281	-66	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCACGGGGCCAGGCTGC	NA	False	NA	-68	True	ATTAAA	-22	NA	94279899	94277823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94278138_94279764
WTC11_00020370	chr12	-	709	5	FSM	ENSG00000173588.16	ENST00000552632.5	705	5	0	-4	0	4	multi-exon	FALSE	canonical	1	19	junction_1	47.1911008559877	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAGAGAATTCTTTAAA	NA	False	NA	48	True	ATTAAA	-31	NA	94331798	94306444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94306626_94308782_94308918_94309917_94310108_94312913_94313018_94331699
WTC11_00020371	chr12	-	3750	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	79	-699	0	117	multi-exon	FALSE	canonical	1	31	junction_3	24.8554934683574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATCCTAATACAGAAA	-94457484	True	NA	NA	False	AATAGA	-2	NA	94459867	94307580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
WTC11_00020372	chr12	-	3699	17	FSM	ENSG00000173588.16	ENST00000397809.10	3686	17	0	-13	0	13	multi-exon	FALSE	canonical	1	31	junction_3	30.2932928839042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGTCCACAGTTACAT	-94457484	True	NA	NA	False	AATAAA	-35	NA	94459867	94307684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
WTC11_00020373	chr12	-	1880	3	FSM	ENSG00000173588.16	ENST00000546783.1	546	3	-310	-1024	-310	-105	multi-exon	FALSE	canonical	3	119	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAATATAGCTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	94313488	94307802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913
WTC11_00020374	chr12	-	4658	10	NNC	ENSG00000173588.16	novel	3122	9	NA	NA	44	11	intron_retention	FALSE	canonical	1	1	junction_4	51.8461637091697	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCCTGTTTCATTCTT	-94457440	True	NA	6	True	AATAAA	-26	NA	94459823	94368386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94402577_94403169_94403263_94410620_94410680_94411696_94411848_94412317_94412592_94435274_94435328_94459556
WTC11_00020375	chr12	-	3133	9	FSM	ENSG00000173588.16	ENST00000547575.5	3122	9	0	-11	0	11	multi-exon	FALSE	canonical	3	45	junction_7	32.8671568590896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCCTGTTTCATTCTT	-94457569	True	NA	6	True	AATAAA	-26	NA	94459952	94368386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
WTC11_00020379	chr12	-	971	1	FSM	ENSG00000213250.5	ENST00000525031.2	1226	1	90	165	90	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGCTGACGGCTGCA	-94424865	False	NA	NA	False	NA	NA	NA	94424879	94423908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94423900_94424900
WTC11_00020381	chr12	-	5979	4	FSM	ENSG00000057704.13	ENST00000261226.9	5874	4	-30	-75	-30	75	multi-exon	FALSE	canonical	3	10	junction_3	3.2659863237109	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCAGGTTCACAGCAAA	-94650327	True	NA	NA	False	AATAGA	-17	NA	94650587	94567046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94571738_94578393_94578530_94581621_94582539_94650352
WTC11_00020382	chr12	-	585	5	NNC	ENSG00000184752.14	novel	708	5	NA	NA	0	27262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1598.30791385765	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGCCTTCTATGATC	-94991544	True	NA	NA	False	NA	NA	NA	95003697	94944065	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_94944093_94971336_94971621_94994169_94994258_95002738_95002822_95003594
WTC11_00020384	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1909.83603681049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-94991560	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
WTC11_00020385	chr12	-	1647	2	FSM	ENSG00000184752.14	ENST00000538372.7	1797	2	151	-1	151	0	multi-exon	FALSE	canonical	3	2966	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94983374	False	NA	NA	False	ATTAAA	-16	NA	94995527	94971331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94994169
WTC11_00020387	chr12	-	563	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	-1	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	623.193032338741	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94991544	True	NA	NA	False	ATTAAA	-16	NA	95003697	94971331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
WTC11_00020389	chr12	-	491	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	-4	0	0	multi-exon	FALSE	canonical	3	290	junction_1	2031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94991560	True	NA	NA	False	ATTAAA	-16	NA	95003713	94971331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_95002738_95002822_95003594
WTC11_00020390	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	18.0128159503599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-95069410	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
WTC11_00020391	chr12	-	2330	14	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	36.5671951797456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069361	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95022404_95025149_95025256_95028386_95028510_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
WTC11_00020394	chr12	-	2023	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	-9	0	0	multi-exon	FALSE	canonical	2	3	junction_1	45.5074237881547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069329	True	NA	0	True	AATAAA	-26	NA	95073537	95030408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
WTC11_00020395	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.3282684049941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069372	True	NA	0	True	AATAAA	-26	NA	95073580	95030408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
WTC11_00020399	chr12	-	2232	20	FSM	ENSG00000180263.14	ENST00000451107.3	2232	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	14.7953724891066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAATTGTTTTGTTA	-95217461	False	NA	-90	True	TATAAA	-39	NA	95217482	95081397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95217224
WTC11_00020400	chr12	-	4568	19	FSM	ENSG00000180263.14	ENST00000546711.5	4568	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_18	9.64493086330974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGACTACTAATTACT	-95215970	True	NA	NA	False	ATTAAA	-19	NA	95217464	95085542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
WTC11_00020403	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	253.02442569839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95545579	True	NA	-2	True	ATTAAA	-21	NA	95551476	95516559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
WTC11_00020407	chr12	-	308	2	Antisense	novelGene_ENSG00000257150.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACCCGCCTTGGCCTCC	NA	False	NA	NA	False	NA	NA	NA	95571335	95549957	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_95550207_95571276
WTC11_00020408	chr12	-	298	1	FSM	ENSG00000258343.2	ENST00000553163.1	457	1	106	53	106	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAGCAATATTTCCTCTG	-95858560	False	NA	NA	False	NA	NA	NA	95858587	95858289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95858300_95858600
WTC11_00020409	chr12	-	213	2	FSM	ENSG00000084110.11	ENST00000548636.1	370	2	49	108	49	-108	multi-exon	FALSE	canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTACCTGAGGCTCAG	NA	False	NA	NA	False	AGTAAA	-3	NA	95985918	95983789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95983992_95985907
WTC11_00020410	chr12	-	2550	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	-410	0	410	multi-exon	TRUE	canonical	3	1035	junction_13	124.224023540905	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGACTCTGCCTCGAA	-96011596	True	NA	NA	False	NA	NA	NA	96035587	96000342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
WTC11_00020412	chr12	-	4196	17	FSM	ENSG00000059758.8	ENST00000261211.8	4036	17	-132	-28	-91	28	multi-exon	FALSE	canonical	3	100	junction_1	28.0064166754692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGAATTCCTAGGGGTA	-96398801	True	NA	NA	False	TATAAA	-42	NA	96400571	96278232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96280280_96280807_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
WTC11_00020413	chr12	-	4418	16	FSM	ENSG00000059758.8	ENST00000543119.6	2442	16	-105	-1871	-105	-292	multi-exon	FALSE	canonical	3	148	junction_4	18.4217263034711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTTATTGAGTCACA	-96398815	True	NA	-4	True	NA	NA	NA	96400585	96278552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
WTC11_00020416	chr12	-	3343	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	-37	5	-37	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGCAAATAGTGTTAC	-98457079	True	NA	NA	False	AATAAA	-28	NA	98457182	98453839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98453800_98457200
WTC11_00020418	chr12	-	1660	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	-15	0	15	multi-exon	FALSE	canonical	3	31	junction_1	56.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCAAGAACTTTATCCA	NA	False	NA	1	True	AATAAA	-29	NA	98645113	98613389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98614341_98634295_98634414_98644522
WTC11_00020420	chr12	-	2925	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	-23	0	23	multi-exon	FALSE	canonical	3	85	junction_1	29.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCCTGTCAAGGCAAAT	-98642507	True	NA	NA	False	AATAAA	-40	NA	98644788	98624225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98626767_98634295_98634414_98644522
WTC11_00020421	chr12	-	787	1	FSM	ENSG00000214203.4	ENST00000482189.1	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGTCCCTGGGCGAC	NA	False	NA	NA	False	NA	NA	NA	100009838	100009051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100009100_100009800
WTC11_00020423	chr12	-	6859	21	Fusion	ENSG00000279148.1_ENSG00000111647.13	novel	664	6	NA	NA	13	-5	multi-exon	FALSE	canonical	1	2	junction_1	29.4283451794354	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTACTGGCTTATGTA	-100139377	True	NA	NA	False	GATAAA	-14	NA	100142861	100026252	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_100028611_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
WTC11_00020424	chr12	-	471	1	FSM	ENSG00000280088.1	ENST00000623268.1	1750	1	-331	1610	-331	-1610	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTAGTGGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	100034405	100033934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100033900_100034400
WTC11_00020427	chr12	-	2343	9	FSM	ENSG00000238105.7	ENST00000421840.2	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	9.39414711402797	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTGAGTATGTTAT	NA	False	NA	4	True	NA	NA	NA	100173245	100165047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100166141_100166330_100166637_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111
WTC11_00020429	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.80752262296652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	-100266479	True	NA	NA	False	AATAAA	-28	NA	100267079	100252262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
WTC11_00020431	chr12	-	1045	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	-12	0	12	multi-exon	FALSE	canonical	3	21	junction_3	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTGGTTTGGTTCGTA	-100266455	True	NA	NA	False	AATAAA	-34	NA	100267055	100255860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
WTC11_00020432	chr12	-	3192	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	26	-21	0	21	multi-exon	FALSE	canonical	3	486	junction_5	32.5392071200268	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTAGTATTTTATTTT	-101397784	True	NA	6	True	AAAACA	-44	NA	101407746	101393094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
WTC11_00020434	chr12	-	1173	5	FSM	ENSG00000120805.14	ENST00000551671.5	879	5	-64	-230	-45	230	multi-exon	FALSE	canonical	3	486	junction_4	35.1167694983465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAGAAGTAGTAGTAGC	-101397855	True	NA	NA	False	NA	NA	NA	101407817	101395912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
WTC11_00020436	chr12	-	550	5	FSM	ENSG00000111670.16	ENST00000549738.5	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.7602730088154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGATTATGTTTACTATA	-101757639	False	NA	NA	False	NA	NA	NA	101757657	101749141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101749192_101753371_101753540_101756419_101756567_101757211_101757311_101757571
WTC11_00020439	chr12	-	601	2	FSM	ENSG00000111670.16	ENST00000552009.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTGATAGCGTATTAA	-101768093	True	NA	NA	False	AATAAA	-19	NA	101768103	101765760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101766295_101768036
WTC11_00020443	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	41.0365690573664	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060729	True	NA	0	True	AATAAA	-18	NA	102062079	102012941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
WTC11_00020447	chr12	-	429	6	FSM	ENSG00000171759.10	ENST00000635477.1	429	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.95315042645489	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTTGCAGTGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	102852817	102839208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102851686_102851757_102852814
WTC11_00020449	chr12	-	642	4	FSM	ENSG00000171759.10	ENST00000550978.6	652	4	0	10	0	-10	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGAAACTATTGTCTC	-102916797	False	NA	NA	False	TATAAA	-5	NA	102917114	102877244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102877551_102894734_102894919_102912790_102912899_102917070
WTC11_00020452	chr12	-	6414	8	ISM	ENSG00000111696.12	ENST00000392876.8	7244	14	47242	-6	-520	6	3prime_fragment	FALSE	canonical	2	8	junction_1	5.61702950038214	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATTGTCAGTCACCTA	-103793982	False	NA	-11	True	AATAAA	-20	NA	103793992	103772303	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_103778082_103780299_103780365_103785334_103785476_103787440_103787528_103788837_103788920_103793163_103793266_103793409_103793513_103793936
WTC11_00020453	chr12	-	1730	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	2	-30	0	30	multi-exon	FALSE	canonical	3	94	junction_2	7.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTGCAACCTGTTTG	-103955118	True	NA	NA	False	NA	NA	NA	103957213	103950163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103956630_103956749_103957068
WTC11_00020454	chr12	-	2175	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	-100	-1390	26	0	multi-exon	FALSE	canonical	3	53	junction_2	15	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-103957216	False	NA	NA	False	ATTAAA	-31	NA	103957247	103950193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103953413_103953535_103956630
WTC11_00020455	chr12	-	1821	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	-32	-546	0	0	multi-exon	FALSE	canonical	3	53	junction_2	17.326921891156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-103955118	True	NA	NA	False	ATTAAA	-31	NA	103957213	103950193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
WTC11_00020456	chr12	-	1451	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	-5	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-103955095	True	NA	0	True	ATTAAA	-25	NA	103957190	103950739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103956630
WTC11_00020459	chr12	-	1930	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	-3	0	3	multi-exon	FALSE	canonical	3	60	junction_7	11.1575086824972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCATGTTACTATTC	-104050176	False	NA	-13	True	AATAAA	-20	NA	104050187	103988983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
WTC11_00020466	chr12	-	3174	21	FSM	ENSG00000136044.12	ENST00000258530.8	3171	21	0	-3	0	0	multi-exon	FALSE	canonical	3	109	junction_11	17.5933936464799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAGATGTGGTTATTTTC	-105234830	True	NA	-1	True	AATAAA	-34	NA	105236174	105173296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
WTC11_00020467	chr12	-	3053	20	NIC	ENSG00000136044.12	novel	3171	21	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	33.6739293520305	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	-105234853	True	NA	-4	True	AATAAA	-31	NA	105236197	105173299	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_105174449_105176034_105176083_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
WTC11_00020468	chr12	-	3187	21	FSM	ENSG00000136044.12	ENST00000547439.5	3196	21	6	3	6	0	multi-exon	FALSE	canonical	1	3	junction_12	36.040914250335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	-105234853	True	NA	-4	True	AATAAA	-31	NA	105236197	105173299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199525_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
WTC11_00020477	chr12	-	2821	2	FSM	ENSG00000257711.2	ENST00000655603.1	4079	2	611	647	611	-647	multi-exon	FALSE	canonical	3	6	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTCAACCTCTCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	106682883	106679229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106681158_106681990
WTC11_00020478	chr12	-	1841	3	FSM	ENSG00000120832.10	ENST00000392830.6	1763	3	5	-83	2	69	multi-exon	FALSE	canonical	3	18	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTTAGGAAGCAAAT	-106986202	True	NA	NA	False	NA	NA	NA	106987144	106977207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106978772_106985114_106985216_106986968
WTC11_00020480	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	-106986184	True	NA	-1	True	ATTAAA	-22	NA	106987126	106977548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106978772_106985114
WTC11_00020483	chr12	-	2992	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	-5	0	5	multi-exon	FALSE	canonical	3	152	junction_11	22.0031563392366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGTGTTTTTTTTTCTT	-107089862	True	NA	5	True	ATTAAA	-24	NA	107093549	106991358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
WTC11_00020484	chr12	-	621	4	FSM	ENSG00000008405.12	ENST00000549356.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	6.23609564462324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGAGTCTAAAACAAT	-106997526	False	NA	NA	False	AAAAAG	-27	NA	106997539	106992486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106992891_106992964_106993037_106997293_106997387_106997487
WTC11_00020486	chr12	-	4317	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	-135	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	11.5365033303384	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTCCTCTGGTAGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	107761272	107732870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
WTC11_00020492	chr12	-	508	1	FSM	ENSG00000258072.1	ENST00000547904.1	679	1	172	-1	172	1	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGGACTTCATTCAT	-107903501	True	NA	NA	False	NA	NA	NA	107903776	107903268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107903300_107903800
WTC11_00020493	chr12	-	4154	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_10	30.3415231109343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCCAGCATTCCTC	-108560544	True	NA	-3	True	AATAAA	-18	NA	108561173	108522213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
WTC11_00020494	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	70.6739383051175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	-108560530	True	NA	-35	True	NA	NA	NA	108561159	108522703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
WTC11_00020503	chr12	-	577	5	FSM	ENSG00000110880.11	ENST00000546705.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	212.265164358168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTGTTTCTGCAGT	-108652292	True	NA	-5	True	NA	NA	NA	108652345	108646568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108646646_108647400_108647523_108648604_108648851_108648962_108649021_108652271
WTC11_00020507	chr12	-	2372	14	FSM	ENSG00000084112.15	ENST00000551165.5	2354	14	-18	0	-18	0	multi-exon	FALSE	canonical	3	31	junction_4	6.96653029697698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTATCGATATATGACT	-108856208	True	NA	-10	True	ATTAAA	-26	NA	108857608	108791918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
WTC11_00020509	chr12	-	1186	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	-6	0	5	multi-exon	FALSE	canonical	3	52	junction_3	26.8865931067677	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTCCCTCTCGAC	-109091823	True	NA	3	True	AATAAA	-23	NA	109093472	109088182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
WTC11_00020512	chr12	-	1472	3	ISM	ENSG00000189046.11	ENST00000343075.7	1030	4	-16	33	0	0	intron_retention	FALSE	canonical	3	104	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTACTAAAAAATAAAAAC	-109091839	True	NA	-36	True	NA	NA	NA	109093488	109088221	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_109088513_109090008_109090208_109092506
WTC11_00020515	chr12	-	3963	7	NIC	ENSG00000110906.13	novel	3920	7	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	71.7286553617172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	-109471756	True	NA	NA	False	AATAAA	-15	NA	109477340	109448654	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458082_109460635_109460806_109469514_109469729_109477259
WTC11_00020516	chr12	-	3096	4	FSM	ENSG00000110906.13	ENST00000540089.5	3096	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	11.115554667022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGTGTATTGGGCAGA	-109458958	False	NA	0	True	AATAAA	-28	NA	109458985	109449960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991
WTC11_00020519	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.0850628253578	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	-109570688	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
WTC11_00020520	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	83.383984606691	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	-109570687	True	NA	-8	True	AATAAA	-11	NA	109573503	109556702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
WTC11_00020521	chr12	-	1089	9	FSM	ENSG00000139428.12	ENST00000544051.5	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	92.1946819236338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATGAGAAGGAGCT	-109570698	True	NA	-25	True	AATGAA	-32	NA	109573514	109556750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
WTC11_00020522	chr12	-	544	5	FSM	ENSG00000139428.12	ENST00000542390.5	544	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	23.5106358910175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTCAGTTAGCCTTGC	-109570691	True	NA	NA	False	NA	NA	NA	109573507	109561683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
WTC11_00020524	chr12	-	1177	3	FSM	ENSG00000139428.12	ENST00000537236.2	1342	3	45	120	-21	-120	multi-exon	FALSE	canonical	3	213	junction_1	22	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGGTGCAGCGGCTCAC	-109570719	True	NA	NA	False	AATAAA	-16	NA	109573535	109567937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109568864_109571648_109571711_109573346
WTC11_00020526	chr12	-	2325	6	NNC	ENSG00000139433.11	novel	973	6	NA	NA	0	664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.308309263799	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTTTCTGTAGCCATA	-109877010	True	NA	NA	False	NA	NA	NA	109880421	109850280	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_109850318_109850943_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
WTC11_00020527	chr12	-	3811	4	ISM	ENSG00000139433.11	ENST00000544393.5	914	5	19949	-1316	19853	0	3prime_fragment	FALSE	canonical	2	3	junction_2	126.651753508061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	NA	False	NA	-1	True	AATAAA	-22	NA	109860472	109850944	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_109852738_109855618_109855770_109857582_109857660_109858682
WTC11_00020528	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	11.5542200082913	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-109877130	True	NA	-1	True	AATAAA	-22	NA	109880541	109850944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
WTC11_00020530	chr12	-	5610	20	FSM	ENSG00000139436.22	ENST00000355312.8	5598	20	0	-12	0	12	multi-exon	FALSE	canonical	3	28	junction_5	30.5352981340115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCTCCCCATCAATT	-109994286	True	NA	0	True	AATAAA	-28	NA	109996368	109929791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
WTC11_00020533	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	30.2415446101578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	-109994214	True	NA	NA	False	NA	NA	NA	109996296	109947321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
WTC11_00020536	chr12	-	1734	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	21	0	-21	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAATGTCCTTATCTC	-110046278	True	NA	-15	True	GATAAA	-3	NA	110048555	110027048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110028590_110048362
WTC11_00020540	chr12	-	3172	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	19	-168	0	168	multi-exon	FALSE	canonical	3	334	junction_10	34.9972856090297	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTGAAACCCCCGCT	-110399138	True	NA	NA	False	NA	NA	NA	110403689	110372731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
WTC11_00020543	chr12	-	748	3	FSM	ENSG00000196510.14	ENST00000486321.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_2	13.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACGACATGGAAGGGAG	-110377873	False	NA	NA	False	NA	NA	NA	110377901	110374245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110374334_110376065_110376217_110377392
WTC11_00020544	chr12	-	1455	2	FSM	ENSG00000196510.14	ENST00000452721.2	1455	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTCTTTGAGGGTTGT	-110378069	False	NA	-14	True	AATAAA	-30	NA	110378097	110375466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110376217_110377392
WTC11_00020545	chr12	-	2210	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	-10	0	0	multi-exon	FALSE	canonical	3	334	junction_9	27.5886897562957	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTCTTTGAGGGTTGT	-110399179	True	NA	-14	True	AATAAA	-30	NA	110403730	110375466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
WTC11_00020546	chr12	-	2264	11	NNC	ENSG00000196510.14	novel	2200	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	147.687541790091	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAAGTGGTTTCTTTGA	-110399138	True	NA	-21	True	AATAAA	-23	NA	110403689	110375473	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110393043_110393146_110395100_110395221_110396265_110396453_110403526
WTC11_00020547	chr12	-	930	4	FSM	ENSG00000196510.14	ENST00000471602.6	930	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_2	12.2836838484589	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGATTTCCTTGTAGCTG	-110383253	False	NA	NA	False	NA	NA	NA	110383265	110376131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842
WTC11_00020552	chr12	-	324	1	FSM	ENSG00000258011.2	ENST00000549577.2	324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGCGTGCCGCCTGCTC	-110430249	False	NA	NA	False	NA	NA	NA	110430282	110429958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110430000_110430300
WTC11_00020553	chr12	-	1342	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	52	-448	0	448	multi-exon	FALSE	canonical	3	1969	junction_3	108.877096867166	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGGGAGTTTGAGACTAG	-110423304	True	NA	NA	False	NA	NA	NA	110450285	110434374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
WTC11_00020556	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_4	59.0772583062179	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-110461763	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
WTC11_00020557	chr12	-	1494	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_7	234.470658710036	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-110461770	True	NA	-13	True	TATAAA	-45	NA	110468264	110452485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
WTC11_00020563	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	754.103606940054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-110485701	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
WTC11_00020564	chr12	-	1057	5	FSM	ENSG00000111237.19	ENST00000552130.6	1057	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	774.860430980961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGATAACCTGTATTT	-110483148	False	NA	-9	True	AATAAA	-18	NA	110499546	110491623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110499456
WTC11_00020565	chr12	-	996	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	773.351916982172	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	-110485680	True	NA	-10	True	AATAAA	-17	NA	110502078	110491624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
WTC11_00020567	chr12	-	598	2	FSM	ENSG00000111237.19	ENST00000548539.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATATTTGGAACTTTATT	-110479819	False	NA	NA	False	AAGAAA	-28	NA	110496217	110491730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110496011
WTC11_00020568	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	763.751595743014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-110485713	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
WTC11_00020572	chr12	-	1598	8	FSM	ENSG00000122986.14	ENST00000242607.13	1685	8	0	87	0	24	multi-exon	FALSE	canonical	3	46	junction_7	13.5586405916625	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTATTCTTTCCTCTGT	-110688278	True	NA	5	True	AATAAA	-25	NA	110689115	110648772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689079
WTC11_00020573	chr12	-	793	6	FSM	ENSG00000122986.14	ENST00000549442.5	829	6	36	0	5	0	multi-exon	FALSE	canonical	3	9	junction_5	29.0723236085456	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGTCTCCTGCACTCCC	-110689660	True	NA	NA	False	NA	NA	NA	110689773	110651217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689725
WTC11_00020574	chr12	-	2432	8	NNC	ENSG00000186298.12	novel	1472	8	NA	NA	0	41247	intron_retention	FALSE	non_canonical	0	0	junction_1	678.624539274938	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATGGAAAATAAGAG	-110702263	True	NA	NA	False	AAAAAG	-7	NA	110742867	110678432	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_110678468_110719810_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00020576	chr12	-	2552	7	FSM	ENSG00000186298.12	ENST00000335007.10	2552	7	0	0	0	0	multi-exon	FALSE	canonical	3	1809	junction_4	62.9481709203867	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCCTCTACCATTTGG	-110702287	True	NA	NA	False	AATAGA	-16	NA	110742891	110719679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00020577	chr12	-	1917	8	FSM	ENSG00000186298.12	ENST00000340766.9	1472	8	0	-445	0	217	multi-exon	FALSE	canonical	3	55	junction_1	659.451720316637	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTCTCAAAGGTACGC	-110702335	True	NA	NA	False	NA	NA	NA	110742939	110719462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110720205_110721104_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00020579	chr12	-	1882	6	FSM	ENSG00000186298.12	ENST00000550991.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	3	1809	junction_3	68.3795291004552	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTAGGGGGGCTTTTAC	-110702269	True	NA	NA	False	NA	NA	NA	110742873	110721300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00020580	chr12	-	2464	5	FSM	ENSG00000186298.12	ENST00000551676.5	1581	5	-34	-849	0	0	multi-exon	FALSE	canonical	3	1809	junction_2	76.2377039266005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAACAGCAAATGAAAGA	-110702269	True	NA	NA	False	NA	NA	NA	110742873	110720920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00020584	chr12	-	1799	10	FSM	ENSG00000204842.18	ENST00000389154.7	1794	10	0	-5	0	5	multi-exon	FALSE	canonical	3	64	junction_3	43.7808797547373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTGTGTCTGTATAAG	NA	False	NA	5	True	AATAAA	-24	NA	111488612	111452208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475
WTC11_00020585	chr12	-	4352	25	FSM	ENSG00000204842.18	ENST00000673436.1	4347	25	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_16	40.5462484564095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTGTGTCTGTATAAG	-111596110	True	NA	5	True	AATAAA	-24	NA	111599315	111452208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00020586	chr12	-	4385	26	FSM	ENSG00000204842.18	ENST00000643669.2	4380	26	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_17	47.3341145475438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTGTGTCTGTATAAG	-111596110	True	NA	5	True	AATAAA	-24	NA	111599315	111452208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111479069_111479103_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00020588	chr12	-	4648	25	FSM	ENSG00000204842.18	ENST00000550104.5	4648	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	41.6652499759158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAAACTTAAAAA	-111599666	False	NA	-54	True	NA	NA	NA	111599676	111452267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485270_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00020592	chr12	-	3809	23	NIC	ENSG00000204842.18	novel	4347	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	39.8490177404165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATAACCCTTGAAAGTC	-111596110	True	NA	9	True	NA	NA	NA	111599315	111452528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00020602	chr12	-	3996	12	FSM	ENSG00000089234.16	ENST00000419234.9	3996	12	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	21.0076727423479	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCGTGTGAAATGT	-111679423	True	NA	-3	True	ATTAAA	-21	NA	111685956	111642145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685710
WTC11_00020605	chr12	-	858	3	FSM	ENSG00000234608.9	ENST00000656227.2	1067	3	210	-1	20	1	multi-exon	FALSE	canonical	3	35	junction_2	68	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837400	False	NA	-4	True	AATAAA	-23	NA	111841686	111839766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840478_111841326_111841471_111841683
WTC11_00020606	chr12	-	553	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	-1	0	1	multi-exon	FALSE	canonical	3	35	junction_3	59.606114526019	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837424	False	NA	-4	True	AATAAA	-23	NA	111841710	111839766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
WTC11_00020609	chr12	-	663	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	4	-7	1	multi-exon	FALSE	canonical	3	23	junction_2	17	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837678	True	NA	-4	True	AATAAA	-23	NA	111841964	111839766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841683
WTC11_00020611	chr12	-	2438	3	FSM	ENSG00000234608.9	ENST00000456429.6	1961	3	-481	4	-481	0	multi-exon	FALSE	canonical	3	57	junction_1	57	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	NA	False	NA	-5	True	AATAAA	-22	NA	111843383	111839767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841326
WTC11_00020612	chr12	-	875	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-7	9	-7	1	multi-exon	FALSE	canonical	3	56	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837678	True	NA	-4	True	AATAAA	-23	NA	111841964	111839766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111841326
WTC11_00020616	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	8.13076718397471	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	-112012305	True	NA	-77	True	NA	NA	NA	112013135	111931369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
WTC11_00020621	chr12	-	3646	2	NNC	ENSG00000111300.10	novel	2440	2	NA	NA	5168	187	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTCAACATATATGTATT	-112030222	False	NA	NA	False	NA	NA	NA	112030237	112026501	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_112029654_112029743
WTC11_00020622	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_18	14.678018749291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	-112105688	True	NA	0	True	TATAAA	-22	NA	112108783	112026688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
WTC11_00020623	chr12	-	5815	23	FSM	ENSG00000111300.10	ENST00000552527.5	5815	23	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_17	14.9779452187277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTTTGTGTGTGTCTG	-112105690	True	NA	-5	True	CATAAA	-19	NA	112108785	112027787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112029654_112033232_112033380_112039228_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
WTC11_00020628	chr12	-	15735	76	FSM	ENSG00000173064.14	ENST00000682272.1	15752	76	6	11	6	2	multi-exon	TRUE	canonical	2	11	junction_32	9.10544647755153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAATTATTATGGTCTC	-112381065	True	NA	-18	True	ATTAAA	-4	NA	112382425	112160205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112162524_112163041_112163265_112163541_112163738_112164108_112164276_112167316_112167539_112167813_112167918_112169502_112169659_112170332_112170453_112171116_112171264_112172670_112172862_112175735_112175860_112176595_112176703_112178930_112179083_112179173_112179398_112183058_112183267_112184186_112185494_112190785_112190966_112192559_112192766_112193060_112193192_112193468_112193675_112194884_112195067_112200637_112200799_112203635_112203773_112204485_112204624_112207873_112208001_112208493_112208631_112210014_112210253_112212486_112212651_112216291_112216372_112216772_112216922_112217033_112217196_112219385_112219490_112226642_112226759_112228088_112228259_112228646_112228812_112229697_112229881_112230686_112230823_112231512_112231716_112233003_112233086_112235076_112235267_112235503_112235785_112236944_112237099_112239051_112239237_112239880_112240028_112243352_112243520_112243619_112243762_112243873_112244010_112246900_112247077_112247461_112247551_112248066_112248172_112248319_112248513_112250143_112250378_112250970_112251135_112252423_112252529_112254042_112254163_112256319_112256519_112258495_112258597_112259111_112259266_112261304_112261430_112264083_112264213_112265174_112265296_112265877_112265984_112266911_112266983_112269703_112269850_112270226_112270460_112273654_112273796_112274846_112274961_112279227_112279387_112283109_112283303_112306063_112306235_112308752_112308892_112309560_112309670_112313016_112313148_112314456_112314547_112319224_112319743_112381951
WTC11_00020630	chr12	-	1030	4	FSM	ENSG00000173064.14	ENST00000548588.2	1030	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.5730705262081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTTTTGTCTTTTTT	NA	False	NA	-12	True	TATAAA	-21	NA	112176702	112170739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112171348_112172670_112172862_112175735_112175860_112176595
WTC11_00020632	chr12	-	940	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	-19	0	19	multi-exon	FALSE	canonical	3	6734	junction_6	1778.01750553812	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGGTTTTTAAAAAAAA	-112279273	True	NA	0	True	ATTAAA	-33	NA	112409605	112405169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
WTC11_00020633	chr12	-	2008	3	FSM	ENSG00000089009.16	ENST00000546368.2	2008	3	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_2	2546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAATCCTTGGATTG	-112279303	True	NA	NA	False	NA	NA	NA	112409635	112406293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406343_112406746_112408657_112409586
WTC11_00020634	chr12	-	332	4	FSM	ENSG00000089009.16	ENST00000550238.1	338	4	6	0	6	0	multi-exon	FALSE	canonical	3	870	junction_3	4759.75398523915	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGTAAGAAAATCCTTG	-112410260	False	NA	NA	False	NA	NA	NA	112410364	112406298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406343_112406746_112406891_112408239_112408339_112410319
WTC11_00020635	chr12	-	1082	4	FSM	ENSG00000089009.16	ENST00000551041.6	1082	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	4824.93608478104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGTTTTCCTGAAGCA	-112279273	True	NA	NA	False	NA	NA	NA	112409605	112406342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112407070_112408239_112408339_112408419_112408657_112409586
WTC11_00020636	chr12	-	781	4	FSM	ENSG00000089009.16	ENST00000552455.5	781	4	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_3	4414.53153422497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGCAAGATACAACTTA	-112279261	True	NA	NA	False	NA	NA	NA	112409593	112406628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406891_112408239_112408339_112408419_112408657_112409410
WTC11_00020637	chr12	-	1014	4	FSM	ENSG00000089009.16	ENST00000550566.6	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5144.7853858705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGTACCTGTGCTTGG	-112279242	True	NA	NA	False	NA	NA	NA	112409574	112406746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406891_112408239_112408339_112408419_112408657_112409040
WTC11_00020640	chr12	-	583	3	FSM	ENSG00000089009.16	ENST00000549562.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_2	2526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGAGTGTGGTGGCTAA	-112279282	True	NA	NA	False	TTTAAA	-44	NA	112409614	112408020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112408339_112408419_112408657_112409586
WTC11_00020644	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	59.5755531858171	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-113176710	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
WTC11_00020645	chr12	-	4745	20	FSM	ENSG00000199899.2_ENSG00000123064.13	ENST00000314045.11	4380	20	1	-366	0	-45	multi-exon	FALSE	canonical	3	248	junction_1	65.8698035895868	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTTCTTAATTTC	-113176710	True	NA	NA	False	NA	NA	NA	113185478	113156807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
WTC11_00020649	chr12	-	1563	4	FSM	ENSG00000089060.12	ENST00000550047.5	2493	4	940	-10	940	0	multi-exon	FALSE	canonical	3	81	junction_2	4.02768199119819	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	NA	False	NA	-16	True	AATAAA	-20	NA	113307903	113298770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690
WTC11_00020651	chr12	-	2050	5	FSM	ENSG00000089060.12	ENST00000548477.5	2053	5	0	3	0	-3	multi-exon	FALSE	canonical	3	12	junction_3	21.2190951739229	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAAAAAAGAAAAAACTTA	-113333794	True	NA	NA	False	NA	NA	NA	113335143	113319976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113320908_113321055_113321109_113321195_113321349_113332748_113332961_113334442
WTC11_00020654	chr12	-	4563	25	FSM	ENSG00000122965.11	ENST00000545145.6	4422	25	0	-141	0	137	multi-exon	TRUE	canonical	3	95	junction_1	60.8791921896691	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCTTACAGCTGTGAA	-113957334	True	NA	NA	False	NA	NA	NA	113966306	113816600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
WTC11_00020655	chr12	-	3598	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	-24	0	24	multi-exon	FALSE	canonical	3	81	junction_1	63.3544783780559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGGTGGGCCTCCAA	-113957338	True	NA	23	True	NA	NA	NA	113966310	113822029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
WTC11_00020656	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_14	29.5597821090833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	-113957353	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
WTC11_00020658	chr12	-	4711	7	FSM	ENSG00000135111.16	ENST00000349155.7	4733	7	11	11	11	-11	multi-exon	FALSE	canonical	0	0	junction_1	2.3094010767585	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAAATGTCTTTGGGCCT	-114684043	True	NA	-12	True	AATAAA	-6	NA	114684164	114670265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114680878_114681147_114682811
WTC11_00020660	chr12	-	9921	32	NNC	ENSG00000123066.9	novel	9885	31	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	14.6311571526448	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGGCTTTTTTCC	NA	False	NA	0	True	AATAAA	-17	NA	116277720	115958575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_115961399_115963406_115963520_115966081_115966244_115968939_115969098_115970593_115970771_115972077_115972237_115975170_115975314_115975514_115975739_115980749_115980939_115982383_115982604_115983116_115983541_115984179_115984373_115986265_115986490_115987108_115987289_115991019_115991958_115996475_115996682_115997009_115997231_116003002_116003103_116005868_116005994_116006305_116006412_116007410_116007637_116008400_116009133_116012796_116012902_116015108_116015275_116019223_116019413_116019777_116019973_116022455_116022602_116096668_116096753_116111427_116111513_116182454_116182464_116237467_116237706_116277059
WTC11_00020664	chr12	-	7404	4	FSM	ENSG00000111412.6	ENST00000547630.1	1371	4	3	-6036	2	-863	multi-exon	FALSE	canonical	2	18	junction_3	90.4224652518511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTGTGTG	-116732926	True	NA	NA	False	NA	NA	NA	116738067	116711033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116737789
WTC11_00020667	chr12	-	5825	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	20	junction_1	0	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-116881461	False	NA	-7	True	ATTAAA	-21	NA	116881477	116856143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116861467_116880975
WTC11_00020671	chr12	-	1602	4	ISM	ENSG00000088992.18	ENST00000335209.12	989	8	0	8977	0	898	5prime_fragment	FALSE	canonical	3	73	junction_2	5.90668171555645	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGCTGCGTGCCTGT	-117098039	True	NA	-1	True	AATAAA	-16	NA	117099416	117047899	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_117049159_117056805_117056887_117075270_117075341_117099224
WTC11_00020674	chr12	-	5981	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	-3075	0	-2	multi-exon	FALSE	canonical	3	155	junction_3	97.6294224720776	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGCTCAAACACCAT	-117179403	True	NA	-18	True	AATAAA	-15	NA	117190456	117141992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
WTC11_00020678	chr12	-	1249	1	ISM	ENSG00000171435.14	ENST00000425217.5	17008	20	505266	8697	92272	-8697	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACAGGCAGCAAATGT	NA	False	NA	NA	False	NA	NA	NA	117462957	117461708	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_117461700_117463000
WTC11_00020679	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	32.5921769754645	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	-118058226	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
WTC11_00020680	chr12	-	1328	8	FSM	ENSG00000176871.9	ENST00000535496.5	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	34.117444218464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACACCACATCTTGTGCT	-118052503	False	NA	-8	True	AAGAAA	-34	NA	118052604	118034195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309
WTC11_00020683	chr12	-	1008	4	FSM	ENSG00000176871.9	ENST00000536602.5	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	36.6696968444882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTCTCATCGGCACT	-118058159	True	NA	NA	False	NA	NA	NA	118061112	118042455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118042973_118043132_118043378_118052309_118052479_118061035
WTC11_00020688	chr12	-	5119	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	-110	0	-110	0	multi-exon	FALSE	canonical	3	34	junction_8	11.4864050076601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	-118104070	False	NA	-17	True	AATAAA	-16	NA	118104121	118063592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
WTC11_00020691	chr12	-	1150	4	FSM	ENSG00000176834.14	ENST00000536905.5	1024	4	0	-126	0	126	multi-exon	FALSE	canonical	3	15	junction_2	16.0831174424198	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCACCGAGCTCCTGGT	-118099443	True	NA	NA	False	NA	NA	NA	118104000	118082151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118082430_118095532_118095815_118102988_118103171_118103592
WTC11_00020692	chr12	-	2533	2	FSM	ENSG00000176834.14	ENST00000542195.1	730	2	0	-1803	0	569	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTCCAAGACTAAAGTT	-118099433	True	NA	NA	False	AAAACA	-10	NA	118103990	118101035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118103171_118103592
WTC11_00020695	chr12	-	3369	2	FSM	ENSG00000122966.17	ENST00000678708.1	3368	2	11	-12	11	0	multi-exon	FALSE	canonical	3	96	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTTAGTGCAATGA	-119691041	False	NA	0	True	AATAAA	-18	NA	119691054	119685790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_119688256_119690150
WTC11_00020706	chr12	-	2859	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	-4	0	4	multi-exon	FALSE	canonical	3	120	junction_2	13.0169120762184	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGGGTCTGTTTGCTC	-120110905	True	NA	-9	True	AATAAA	-21	NA	120116753	120095094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
WTC11_00020713	chr12	-	690	1	FSM	ENSG00000089157.16	ENST00000551217.1	677	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTTTTTTCCTT	-120197362	False	NA	-6	True	AATAAA	-35	NA	120197375	120196685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196700_120197400
WTC11_00020715	chr12	-	1118	8	FSM	ENSG00000089157.16	ENST00000392514.9	1105	8	0	-13	0	13	multi-exon	FALSE	canonical	3	12712	junction_7	3706.12973769849	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTTTTTTCCTT	-119837708	True	NA	-6	True	AATAAA	-35	NA	120201111	120196685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
WTC11_00020716	chr12	-	720	2	FSM	ENSG00000089157.16	ENST00000552292.5	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	23570	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-120197795	False	NA	-22	True	AATAAA	-19	NA	120197808	120196701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321
WTC11_00020717	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	8441.68654982851	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837704	True	NA	-22	True	AATAAA	-19	NA	120201107	120196701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
WTC11_00020718	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	8306.22807148408	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837707	True	NA	-22	True	AATAAA	-19	NA	120201110	120196701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
WTC11_00020719	chr12	-	1260	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	-3	0	-2	multi-exon	FALSE	canonical	3	1072	junction_7	7723.53932297036	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTGGACTCTTAATT	-120201182	False	29	-24	True	AATAAA	-17	NA	120201211	120196703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
WTC11_00020720	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	8232.53952933363	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-119837707	True	NA	-28	True	AATAAA	-13	NA	120201110	120196707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
WTC11_00020721	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1411	junction_3	7901.82862587218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	-119837694	True	NA	-134	True	NA	NA	NA	120201097	120196813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
WTC11_00020724	chr12	-	1159	3	FSM	ENSG00000089157.16	ENST00000548568.5	1127	3	-32	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_1	919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGCAGTGGCACAAT	-120200851	False	NA	NA	False	NA	NA	NA	120200864	120198357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120199206_120199309_120199486_120200729
WTC11_00020732	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_5	101.323491846659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
WTC11_00020733	chr12	-	3835	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	237.825650424844	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCTTGGTGGTC	-120256502	True	NA	2	True	AATAAA	-27	NA	120265771	120210438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
WTC11_00020734	chr12	-	3785	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	268.721829198157	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
WTC11_00020747	chr12	-	2959	15	FSM	ENSG00000135097.7	ENST00000257552.7	2959	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	23.1203594350988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	-120365194	True	NA	-6	True	AATAAA	-16	NA	120369164	120341329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
WTC11_00020748	chr12	-	2989	15	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	28.8461789638823	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	-120365257	True	NA	-6	True	AATAAA	-16	NA	120369227	120341329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120343106_120345569_120345633_120346134_120346290_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
WTC11_00020753	chr12	-	1725	1	FSM	ENSG00000111786.9	ENST00000548326.1	1704	1	0	-21	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120463379	False	NA	-5	True	AATATA	-18	NA	120463396	120461671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120461700_120463400
WTC11_00020754	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3862	junction_2	305.375179083042	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120437366	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
WTC11_00020756	chr12	-	946	2	FSM	ENSG00000111786.9	ENST00000546942.1	946	2	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGATGAAATGCTAAACT	-120437336	True	NA	59	True	NA	NA	NA	120469718	120465138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120465788_120469421
WTC11_00020758	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	23.0849879070072	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-120522407	True	NA	-5	True	AGTAAA	-17	NA	120529158	120503278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
WTC11_00020759	chr12	-	1036	7	FSM	ENSG00000110871.15	ENST00000552443.5	972	7	0	-64	0	64	multi-exon	FALSE	canonical	3	10	junction_6	169.494755736637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTGTGTTTCAGG	-120522389	True	NA	NA	False	TTTAAA	-42	NA	120529140	120503904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120526456_120526547_120528939
WTC11_00020761	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	382.967361533591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575010	True	NA	NA	False	NA	NA	NA	120581379	120578763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
WTC11_00020762	chr12	-	1086	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	157.939861972841	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575033	True	NA	NA	False	NA	NA	NA	120581402	120578763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
WTC11_00020763	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_3	147.443397802532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120574967	True	NA	-49	True	AATAAA	-18	NA	120581336	120579047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
WTC11_00020765	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	413.762839679931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	-120575012	True	NA	-155	True	NA	NA	NA	120581381	120579153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
WTC11_00020769	chr12	-	718	2	FSM	ENSG00000167272.11	ENST00000539716.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTAAATGCAGATAGA	-120575029	True	NA	NA	False	NA	NA	NA	120581398	120580595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120581258_120581342
WTC11_00020773	chr12	-	4456	6	NIC	ENSG00000157895.11	novel	1339	7	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	29.1588751497722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCTGACTGATGGCAAT	-121012219	True	NA	-1	True	AATAAA	-24	NA	121016474	121000488	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
WTC11_00020780	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_8	175.936323264271	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	-121341331	True	NA	-26	True	AATAAA	-15	NA	121352388	121308356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
WTC11_00020786	chr12	-	7581	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	-33	2031	intron_retention	FALSE	canonical	0	0	junction_18	83.8438631530642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTACAAAGGAAGACACCA	-121580383	False	NA	NA	False	NA	NA	NA	121580492	121427064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
WTC11_00020788	chr12	-	5315	23	FSM	ENSG00000089094.20	ENST00000377071.9	5315	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	95.4092533239555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-121580914	False	690	-27	True	AGTAAA	-20	NA	121581023	121429095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580785
WTC11_00020789	chr12	-	3502	14	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	85.4783269530834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAATTTCTGATTCA	-121509657	False	NA	-28	True	AGTAAA	-19	NA	121509691	121429096	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566
WTC11_00020798	chr12	-	1490	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	10	-625	0	-1	multi-exon	FALSE	canonical	3	28	junction_2	10.8730042868667	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGAGTTGCTGTGCAT	-121802847	False	NA	-1	True	AATAAA	-18	NA	121802933	121795267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
WTC11_00020801	chr12	-	1477	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	-6	0	1	multi-exon	FALSE	canonical	3	460	junction_4	66.7311021938046	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTCCTTCCTTGAGG	-122216484	True	NA	1	True	NA	NA	NA	122226052	122207661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
WTC11_00020802	chr12	-	1345	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	-7	0	1	multi-exon	FALSE	canonical	3	27	junction_3	240.992090119157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTCCTTCCTTGAGG	-122216484	True	NA	1	True	NA	NA	NA	122226052	122207661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
WTC11_00020803	chr12	-	2662	5	FSM	ENSG00000184047.20	ENST00000645569.1	2641	5	0	-21	0	0	multi-exon	FALSE	canonical	3	460	junction_4	72.8744639774455	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-122216454	True	NA	-18	True	NA	NA	NA	122226022	122207766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511
WTC11_00020804	chr12	-	1343	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	-7	0	0	multi-exon	FALSE	canonical	3	105	junction_4	247.787489595419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-122216484	True	NA	-18	True	NA	NA	NA	122226052	122207766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
WTC11_00020805	chr12	-	2569	5	FSM	ENSG00000184047.20	ENST00000644509.1	2569	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	222.8530906225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-122216494	True	NA	-18	True	NA	NA	NA	122226062	122207766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644
WTC11_00020806	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	258.274832085685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-122216471	True	NA	39	True	NA	NA	NA	122226039	122207793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
WTC11_00020814	chr12	-	1248	5	FSM	ENSG00000139719.11	ENST00000451053.3	1173	5	-77	2	1	-2	multi-exon	FALSE	canonical	3	3	junction_1	212.017098367089	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTGTATGTTTCAGG	-122262547	True	NA	-1	True	AATAAA	-18	NA	122266493	122252863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122253544_122261260_122261448_122263571_122263700_122264133_122264200_122266306
WTC11_00020815	chr12	-	5838	24	FSM	ENSG00000130779.22	ENST00000537178.5	5229	24	0	-609	0	0	multi-exon	FALSE	canonical	3	27	junction_13	21.6949986831964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGGGTTTTGTT	-122421834	True	NA	-3	True	AATAAA	-13	NA	122422632	122271433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
WTC11_00020816	chr12	-	8260	25	NIC	ENSG00000130779.22	novel	5880	25	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	23.9250856262255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGGGTTTTGTT	-122422665	False	NA	-3	True	AATAAA	-13	NA	122422786	122271433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122322113_122324382_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
WTC11_00020817	chr12	-	927	5	FSM	ENSG00000130779.22	ENST00000536634.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	26.9014404818775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCGACCTTGTAGAAAAA	NA	False	NA	63	True	NA	NA	NA	122279145	122272598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122273101_122274037_122274144_122278153_122278204_122278791_122278943_122279027
WTC11_00020820	chr12	-	2221	11	NNC	ENSG00000111011.18	novel	2001	11	NA	NA	0	36103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.387106591509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGAGTTTCACCATGT	-122518819	True	NA	NA	False	AAAAAG	-1	NA	122526936	122467350	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_122467380_122504725_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
WTC11_00020826	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	132.875881934985	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	-122518819	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
WTC11_00020827	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	273.596710506541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518819	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
WTC11_00020828	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	264.913646307622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518883	True	NA	-40	True	AATAAA	-13	NA	122527000	122505058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
WTC11_00020830	chr12	-	1640	8	NIC	ENSG00000111011.18	novel	3461	10	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	340.649140223036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTGGTGTTAATTTA	-122510880	False	8117	-42	True	AATAAA	-11	NA	122518997	122505060	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122513766_122513875_122515104_122515228_122517226_122517431_122518838
WTC11_00020841	chr12	-	2709	4	FSM	ENSG00000139722.7	ENST00000267202.7	2706	4	0	-3	0	3	multi-exon	FALSE	canonical	3	153	junction_3	21.6999743983464	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACTTATTTACTTG	-122892958	True	NA	2	True	AATAAA	-21	NA	122896124	122865326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122867608_122868479_122868563_122870889_122871062_122895951
WTC11_00020842	chr12	-	2736	4	NNC	ENSG00000139722.7	novel	2706	4	NA	NA	-31	0	intron_retention	FALSE	canonical	3	29	junction_2	72.1310535684104	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	-122892992	True	NA	-1	True	AATAAA	-18	NA	122896158	122865329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_122867608_122868479_122868559_122870889_122871062_122895951
WTC11_00020849	chr12	-	7142	26	FSM	ENSG00000090975.14	ENST00000320201.10	7134	26	0	-8	0	8	multi-exon	FALSE	canonical	1	2	junction_8	4.94772675074119	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTACTGCAGTGGCGA	-123150867	True	NA	7	True	ATTAAA	-25	NA	123151090	122983471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122986351_122986435_122986565_122986645_122986830_122987280_122987431_122987510_122987660_122987784_122987902_122988233_122988351_122988723_122988873_122989786_122989949_122990544_122990710_122992498_122992670_122994800_122994980_122995388_122995661_122996457_122996578_122996720_122996911_122997324_122997573_123000777_123000849_123001053_123001159_123004393_123004490_123005239_123005549_123009849_123010078_123012612_123012735_123013827_123014043_123034512_123034686_123110384_123110489_123150752
WTC11_00020850	chr12	-	8230	24	FSM	ENSG00000280120.1_ENSG00000051825.15	ENST00000606320.6	6369	24	34	-1895	0	0	multi-exon	FALSE	canonical	3	65	junction_15	20.5381290482242	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGCCTTTGTGTGTTT	-123230192	True	NA	-1	True	AATAAA	-21	NA	123233107	123152319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
WTC11_00020853	chr12	-	8134	23	Fusion	ENSG00000280120.1_ENSG00000051825.15	novel	6369	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_21	17.8409525187659	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	-123230226	True	NA	-5	True	AATAAA	-17	NA	123233141	123152323	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
WTC11_00020864	chr12	-	393	1	ISM	ENSG00000111328.7	ENST00000652466.1	3828	7	16701	1112	8831	806	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCTGGAAACAGACTCG	-123251586	False	NA	NA	False	NA	NA	NA	123251616	123251223	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_123251200_123251600
WTC11_00020868	chr12	-	1352	4	FSM	ENSG00000111328.7	ENST00000261692.7	1346	4	0	-6	0	1	multi-exon	FALSE	canonical	3	1677	junction_3	227.592227947754	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTTTTATTTTTTTG	-123260555	True	NA	0	True	ATTAAA	-23	NA	123271856	123260969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123271563
WTC11_00020869	chr12	-	1331	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	-50	0	-50	0	multi-exon	FALSE	canonical	3	103	junction_3	969.295735171791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123271160	False	11301	-33	True	AATAAA	-19	NA	123271191	123261002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
WTC11_00020870	chr12	-	1787	3	FSM	ENSG00000111328.7	ENST00000542174.5	1812	3	25	0	25	0	multi-exon	FALSE	canonical	3	2143	junction_1	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAACAATTTGTATTAAA	-123268021	False	NA	36	True	AATAAA	-10	NA	123268052	123261011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184
WTC11_00020871	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1005.11934062025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	-123272303	False	31	NA	False	NA	NA	NA	123272334	123261275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
WTC11_00020873	chr12	-	11121	32	FSM	ENSG00000139697.14	ENST00000267176.8	11121	32	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_29	10.7188068356132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTGTGCTTTCTTTGCG	-123359389	True	NA	-1	True	AATAAA	-15	NA	123364843	123289108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123296051_123297977_123298172_123302823_123302901_123304581_123304720_123309309_123309403_123309488_123309584_123309709_123309857_123311054_123311130_123313619_123313720_123315372_123315445_123315547_123315661_123317220_123317357_123319899_123320032_123320431_123320608_123320698_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
WTC11_00020874	chr12	-	11128	32	FSM	ENSG00000139697.14	ENST00000602398.3	11128	32	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_29	10.9299157962546	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTGTGCTTTCTTTGCG	-123359393	True	NA	-1	True	AATAAA	-15	NA	123364847	123289108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123296051_123297977_123298172_123302823_123302901_123304581_123304720_123309309_123309403_123309488_123309584_123309709_123309857_123311054_123311130_123313619_123313720_123315372_123315445_123315547_123315661_123317220_123317357_123319899_123320032_123320431_123320608_123320698_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
WTC11_00020876	chr12	-	1747	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	5	0	-5	multi-exon	FALSE	canonical	3	36	junction_3	2.62466929133727	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTGTTTCGCCTGCT	-123436571	True	NA	NA	False	AGTAAA	-14	NA	123436684	123415043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
WTC11_00020877	chr12	-	3927	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	6	0	-6	multi-exon	FALSE	canonical	2	28	junction_2	10.6052921799554	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATATATATATGTACATG	-123533551	True	NA	NA	False	AATAAA	-14	NA	123533719	123470059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
WTC11_00020878	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	256.635411381594	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-123624350	True	NA	NA	False	NA	NA	NA	123633686	123620405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
WTC11_00020879	chr12	-	1752	5	FSM	ENSG00000111361.13	ENST00000537073.1	1768	5	16	0	16	0	multi-exon	FALSE	canonical	3	753	junction_1	28.5864915650732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGTTTCACCAT	-123624414	True	NA	NA	False	NA	NA	NA	123633750	123625966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
WTC11_00020881	chr12	-	1809	4	FSM	ENSG00000119242.9	ENST00000545891.5	1790	4	0	-19	0	0	multi-exon	TRUE	canonical	3	10	junction_3	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGCCTTCCTTCTGTT	-123972469	True	NA	-9	True	NA	NA	NA	123972734	123936416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123972528
WTC11_00020884	chr12	-	7236	36	FSM	ENSG00000196498.13	ENST00000356219.7	7226	36	0	-10	0	9	multi-exon	TRUE	canonical	3	127	junction_22	103.643368119248	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-124422499	False	NA	-3	True	ATTAAA	-27	NA	124422554	124324405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500
WTC11_00020886	chr12	-	8542	47	FSM	ENSG00000196498.13	ENST00000405201.5	8533	47	0	-9	0	9	multi-exon	FALSE	canonical	3	40	junction_25	104.673161313839	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-124495046	True	NA	-3	True	ATTAAA	-27	NA	124495252	124324405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356783_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146
WTC11_00020887	chr12	-	8475	47	FSM	ENSG00000196498.13	ENST00000429285.6	8475	47	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_37	101.363793437488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCATCACTCGCAGGAC	-124535592	True	NA	66	True	NA	NA	NA	124535603	124324597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429704_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564
WTC11_00020898	chr12	-	3405	13	FSM	ENSG00000073060.17	ENST00000261693.11	3405	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	157.609926365343	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-124859129	True	NA	NA	False	CATAAA	-19	NA	124863864	124776855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124778587_124782682_124782812_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
WTC11_00020899	chr12	-	3329	12	FSM	ENSG00000073060.17	ENST00000339570.9	3329	12	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	40.6122564246414	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-124859182	True	NA	NA	False	CATAAA	-19	NA	124863917	124776855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
WTC11_00020901	chr12	-	2972	12	FSM	ENSG00000073060.17	ENST00000680926.1	2972	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	131.901541040754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-124859186	True	NA	NA	False	CATAAA	-30	NA	124863921	124777211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807765_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
WTC11_00020909	chr12	-	2319	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	1384	42	101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-124913954	False	NA	-5	True	AATAAA	-17	NA	124913964	124911645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124911600_124914000
WTC11_00020910	chr12	-	2217	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	-24	0	-18	multi-exon	FALSE	canonical	3	1693	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTATTTTGCATTAG	-124889536	True	NA	19	True	AATAAA	-41	NA	124914650	124911621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124913775_124914586
WTC11_00020921	chr12	-	2327	7	NIC	ENSG00000139370.12	novel	2751	8	NA	NA	647	-15	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	32.4533853738284	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGCGAAATCCATGAG	-128815026	False	NA	-18	True	TATAAA	-8	NA	128815281	128793209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128809942_128810054_128814774
WTC11_00020939	chr12	-	7973	49	FSM	ENSG00000177084.18	ENST00000320574.10	7823	49	0	-150	0	141	multi-exon	TRUE	canonical	0	0	junction_36	43.6873311076055	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGATCAAATCAAATTAG	-132680742	True	NA	NA	False	NA	NA	NA	132687342	132623611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
WTC11_00020942	chr12	-	1591	3	NNC	ENSG00000177084.18	novel	7823	49	NA	NA	248	0	intron_retention	FALSE	canonical	3	13	junction_2	123.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTTGTCACTGTGTAT	-132625689	False	18	NA	False	NA	NA	NA	132625703	132623761	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132624811_132624904_132624995_132625251
WTC11_00020945	chr12	-	7098	46	NIC	ENSG00000177084.18	novel	7823	49	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_33	41.9592394804503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCTTCGCCTGGTGGA	-132680803	True	NA	NA	False	NA	NA	NA	132687403	132626266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641017_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
WTC11_00020954	chr12	-	4677	13	FSM	ENSG00000176915.15	ENST00000357997.10	4590	13	0	-87	0	87	multi-exon	FALSE	canonical	3	375	junction_4	56.1424280043375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCCTCAGATTCGCT	-132754922	True	NA	87	True	NA	NA	NA	132761832	132725415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
WTC11_00020955	chr12	-	9203	12	FSM	ENSG00000176915.15	ENST00000539605.5	10890	12	1852	-165	1852	0	multi-exon	FALSE	canonical	3	375	junction_4	58.3273747448666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCGTGGTAATAATTGCAA	-132759948	False	NA	0	True	AATGAA	-17	NA	132759961	132725502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674
WTC11_00020956	chr12	-	3302	3	FSM	ENSG00000176915.15	ENST00000542282.5	3302	3	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_2	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCGCCCTGTCTTTTC	-132732197	False	NA	NA	False	NA	NA	NA	132732210	132726805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678
WTC11_00020958	chr12	-	1557	4	FSM	ENSG00000176915.15	ENST00000538766.1	1557	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_3	64.251242962469	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAACCCCGCAAAGCC	-132735106	False	NA	NA	False	NA	NA	NA	132735123	132727349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384
WTC11_00020962	chr12	-	1049	2	ISM	ENSG00000176915.15	ENST00000357997.10	4590	13	15	28782	-4	-11046	5prime_fragment	FALSE	canonical	3	508	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTTTTATTTTGT	-132754907	True	NA	-13	True	TATAAA	-18	NA	132761817	132754284	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_132755134_132761617
WTC11_00020965	chr12	-	1098	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	27	0	1	0	multi-exon	FALSE	canonical	3	14	junction_3	13.1993265821489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGCTTTATTACT	-132826598	True	NA	-4	True	AATAAA	-20	NA	132828839	132812947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
WTC11_00020969	chr12	-	2993	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	-3	0	0	multi-exon	FALSE	canonical	2	25	junction_12	86.4181050989252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTGTTGGGCTCGTGTC	-132881459	True	NA	-3	True	AATAAA	-23	NA	132887603	132840348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
WTC11_00020975	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	8.04285397107271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-132955483	True	NA	-12	True	AATAAA	-13	NA	132956306	132921461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
WTC11_00020977	chr12	-	1109	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	347	2586	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTTTCCCTGAGCCTC	-132947445	False	NA	-36	True	AATAAA	-15	NA	132948268	132942211	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132943023_132945620_132945798_132948147
WTC11_00020979	chr12	+	2713	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGGAGTATAAATTATA	NA	False	NA	NA	False	NA	NA	NA	844956	847669	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_845000_847700
WTC11_00020980	chr12	+	231	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAACA	NA	False	NA	NA	False	TATAAA	-17	NA	3846042	3846273	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_3846000_3846300
WTC11_00020983	chr12	+	454	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATTTGCTGAGCTTGAT	NA	False	NA	NA	False	GGGGCT	-31	NA	11464112	11464566	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11464100_11464600
WTC11_00020984	chr12	+	235	1	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTAAGAGGTTTAGAA	NA	False	NA	NA	False	AAAAAG	-44	NA	11464995	11465230	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11465000_11465200
WTC11_00020985	chr12	+	344	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAGGAGCAGAGGCTGA	11613332	False	NA	NA	False	GATAAA	-11	NA	11613349	11613693	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11613300_11613700
WTC11_00020986	chr12	+	268	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTAATTACCACCTTT	NA	False	NA	NA	False	ACTAAA	-35	NA	12060932	12061200	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_12060900_12061200
WTC11_00020987	chr12	+	250	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTGATCTCCCAAGGGA	13264806	False	NA	NA	False	NA	NA	NA	13264818	13265068	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_13264800_13265100
WTC11_00020988	chr12	+	299	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATTGTAATGGTAAAA	14772420	False	NA	NA	False	NA	NA	NA	14772452	14772751	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14772500_14772800
WTC11_00020989	chr12	+	311	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGCCCGGTTGAATATC	NA	False	NA	NA	False	NA	NA	NA	19000506	19000817	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_19000500_19000800
WTC11_00020990	chr12	+	2518	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTGCGCTAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	19167405	19169923	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_19167400_19169900
WTC11_00020991	chr12	+	292	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	21680171	21680463	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_21680200_21680500
WTC11_00020992	chr12	+	215	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTCATTTGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	25804766	25804981	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_25804800_25805000
WTC11_00020993	chr12	+	482	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAACCAGACTCTAAAG	NA	False	NA	NA	False	NA	NA	NA	30752108	30752590	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_30752100_30752600
WTC11_00020994	chr12	+	704	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	887	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCAGGGTCAATATAATG	NA	False	NA	NA	False	NA	NA	NA	31613234	31613938	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_31613200_31613900
WTC11_00020995	chr12	+	751	1	Antisense	novelGene_ENSG00000233381.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTCTCAGTTATTAGAA	NA	False	NA	NA	False	AATATA	-6	NA	31614288	31615039	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_31614300_31615000
WTC11_00020996	chr12	+	819	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATCTGCTCACCTTGG	32415403	False	NA	NA	False	NA	NA	NA	32415414	32416233	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_32415400_32416200
WTC11_00020997	chr12	+	5563	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAATGTATTATATCTA	34028656	False	NA	52	True	AATAAA	-18	NA	34029734	34035297	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_34029700_34035300
WTC11_00020998	chr12	+	1114	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTAAAAACTCATTTTAT	NA	False	NA	NA	False	CATAAA	-42	NA	39440566	39441680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_39440600_39441700
WTC11_00020999	chr12	+	296	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAACACCATGTGT	NA	False	NA	NA	False	NA	NA	NA	50364755	50365051	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_50364800_50365100
WTC11_00021001	chr12	+	1159	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGCCAGGCGCA	53494168	False	NA	NA	False	NA	NA	NA	53494199	53495358	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_53494200_53495400
WTC11_00021002	chr12	+	916	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTATGTTCCAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	56538503	56539419	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_56538500_56539400
WTC11_00021003	chr12	+	2577	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAGCAGCTTTCCTATA	NA	False	NA	NA	False	GATAAA	-45	NA	63586814	63589391	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_63586800_63589400
WTC11_00021005	chr12	+	495	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAAAGAGTCAGCGAA	67771467	False	NA	NA	False	NA	NA	NA	67771488	67771983	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67771500_67772000
WTC11_00021007	chr12	+	370	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGGCTCAGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	72215061	72215431	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72215100_72215400
WTC11_00021008	chr12	+	253	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCCAGGCATTCTTTTA	72704577	False	NA	NA	False	NA	NA	NA	72704595	72704848	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72704600_72704800
WTC11_00021009	chr12	+	2163	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	77614074	77616237	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_77614100_77616200
WTC11_00021011	chr12	+	393	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCTTTGAAAAGATTAAA	79542460	True	NA	NA	False	NA	NA	NA	79542473	79542866	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_79542500_79542900
WTC11_00021013	chr12	+	496	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTAATACTGTTAGAG	95752311	False	NA	NA	False	NA	NA	NA	95752326	95752822	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_95752300_95752800
WTC11_00021014	chr12	+	1803	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCAGTCATTACATTAA	NA	False	NA	NA	False	NA	NA	NA	97479133	97480936	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_97479100_97480900
WTC11_00021016	chr12	+	283	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98884514	98884797	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_98884500_98884800
WTC11_00021018	chr12	+	835	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGCAAAGGACCAGAATAG	104031637	False	NA	NA	False	AATAAA	-44	NA	104031656	104032491	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_104031700_104032500
WTC11_00021019	chr12	+	616	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATTTGCCATTCTTGA	NA	False	NA	NA	False	NA	NA	NA	106347575	106348191	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_106347600_106348200
WTC11_00021020	chr12	+	490	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAACTGTGCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	111092805	111093295	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_111092800_111093300
WTC11_00021021	chr12	+	269	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTCTCAAAAAAAGAAAAAA	NA	False	NA	NA	False	AATAGA	-10	NA	111337758	111338027	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_111337800_111338000
WTC11_00021024	chr12	+	265	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTAGATCAAATTCTAAT	NA	False	NA	NA	False	NA	NA	NA	117595397	117595662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_117595400_117595700
WTC11_00021025	chr12	+	280	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATCTGAGTTTTTATCC	NA	False	NA	NA	False	NA	NA	NA	120915514	120915794	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_120915500_120915800
WTC11_00021026	chr12	+	2741	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCAGGCGCAGTGGCTC	121581961	False	NA	NA	False	TATAAA	-12	NA	121582304	121585045	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_121582300_121585000
WTC11_00021028	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.3806642320656	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	389243	True	NA	NA	False	NA	NA	NA	389347	442004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
WTC11_00021029	chr12	+	2340	14	NNC	ENSG00000120647.10	novel	2300	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	48.3013224609771	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398850	True	NA	15	True	AATAAA	-16	NA	401662	442642	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_432156_432216_433173_433323_438334_438555_440616_440743_440843_440997_441773
WTC11_00021031	chr12	+	2545	2	FSM	ENSG00000177406.5	ENST00000655409.1	2545	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTTCTGAGACTCAG	642785	False	NA	-11	True	ATTAAA	-2	NA	643072	645858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_643718_643958
WTC11_00021033	chr12	+	10505	25	NIC	ENSG00000060237.19	novel	9886	26	NA	NA	16	564	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	17.9535956627697	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCTCTCAAAAAAAAAGT	750485	True	NA	NA	False	NA	NA	NA	752608	912016	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878214_878362_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00021035	chr12	+	9461	19	FSM	ENSG00000082805.21	ENST00000397203.7	7033	19	-20	-2408	-1	-7	multi-exon	FALSE	canonical	3	36	junction_1	18.3841887246005	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGTGCTGTGTCCTT	987763	True	NA	11	True	TATAAA	-8	NA	991227	1495924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
WTC11_00021036	chr12	+	2685	5	NIC	ENSG00000111186.13	novel	1304	4	NA	NA	-455	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.1894019222742	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCCCTTTCCTTAT	1530291	True	NA	7	True	ATTAAA	-15	NA	1530363	1647213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_1530951_1631297_1631435_1632657_1632906_1639683_1639977_1645793
WTC11_00021037	chr12	+	2412	5	NIC	ENSG00000111186.13	novel	1304	4	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	3.53553390593274	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCCCTTTCCTTAT	1629899	False	NA	7	True	ATTAAA	-15	NA	1629912	1647213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_1630227_1631297_1631435_1632657_1632906_1639683_1639977_1645793
WTC11_00021039	chr12	+	900	6	FSM	ENSG00000151067.23	ENST00000682343.1	900	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.979795897113271	1084	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCACGGCGAGCC	NA	False	NA	NA	False	NA	NA	NA	2448975	2550033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2449116_2457566_2457707_2486103_2486263_2493189_2493387_2512811_2512985_2549942
WTC11_00021042	chr12	+	4590	1	FSM	ENSG00000250899.3	ENST00000513358.3	3514	1	0	-1076	0	1076	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTGCGTGATCT	3041408	False	NA	14	True	AGTAAA	-19	NA	3041436	3046026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3041400_3046000
WTC11_00021043	chr12	+	2397	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	2	0	1	multi-exon	FALSE	canonical	2	5	junction_6	2.55796987404919	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGGGATGGCTGGTT	3491096	True	NA	NA	False	AATAAA	-15	NA	3491202	3593971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
WTC11_00021044	chr12	+	3067	1	FSM	ENSG00000118976.5	ENST00000237841.5	3067	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGAAGTATTTTCTAACAG	NA	False	NA	NA	False	NA	NA	NA	3839458	3842525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3839500_3842500
WTC11_00021045	chr12	+	685	3	NNC	ENSG00000256969.2	novel	903	4	NA	NA	-2237	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	NA	False	NA	38	True	AATAAA	-19	NA	4018739	4026658	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4018830_4018981_4019140_4026221
WTC11_00021047	chr12	+	4769	1	NIC	ENSG00000256969.2	novel	903	4	NA	NA	-2087	-2955	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	4017668	True	NA	29	True	AATACA	-22	NA	4018889	4023658	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_4018900_4023700
WTC11_00021049	chr12	+	2151	1	FSM	ENSG00000256356.1	ENST00000456928.2	2069	1	88	-170	88	170	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCGCTTCATAAACACTG	NA	False	NA	NA	False	AATATA	-22	NA	4097538	4099689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4097500_4099700
WTC11_00021050	chr12	+	6849	6	FSM	ENSG00000118971.9	ENST00000676411.1	6849	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	403.569374457478	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	4269756	False	NA	13	True	AATAAA	-14	NA	4269770	4305350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4270369_4274000_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
WTC11_00021051	chr12	+	4648	1	ISM	ENSG00000078237.7	ENST00000179259.6	8209	6	34168	0	19848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	4355367	False	NA	NA	False	ATTAAA	-19	NA	4355380	4360028	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4355400_4360000
WTC11_00021052	chr12	+	848	4	NIC	ENSG00000010219.14	novel	1840	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	19.6015872373189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGACTGTTTTTTTT	4604066	True	NA	16	True	NA	NA	NA	4604856	4613823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_4605087_4610154_4610285_4612542_4612719_4613511
WTC11_00021053	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.483844059096	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	4604106	True	NA	19	True	CATAAA	-20	NA	4604896	4613873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
WTC11_00021054	chr12	+	2243	11	NNC	ENSG00000130035.9	novel	577	4	NA	NA	-25510	2767	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.8506317545446	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGCAATGATAAGCAAT	NA	False	NA	NA	False	ACTAAA	-15	NA	4694889	4775911	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4694919_4726531_4726830_4739162_4739330_4744516_4744701_4745428_4745627_4746143_4746259_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4775247
WTC11_00021055	chr12	+	5033	1	FSM	ENSG00000151079.7	ENST00000280684.3	4237	1	128	-924	128	924	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTATCATGGAGTTCC	4809029	True	NA	NA	False	NA	NA	NA	4809303	4814336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4809300_4814300
WTC11_00021056	chr12	+	1290	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	19	junction_1	1000.91582552976	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	NA	False	NA	-4	True	AATAAA	-3	NA	6199822	6238247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
WTC11_00021057	chr12	+	1448	9	FSM	ENSG00000010278.15	ENST00000382518.6	1566	9	108	10	-18	2	multi-exon	FALSE	canonical	3	8	junction_1	940.073725499761	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTGGTTTTTGTTTTG	NA	False	NA	10	True	AATAAA	-17	NA	6199822	6238261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200073_6200421_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
WTC11_00021058	chr12	+	1360	9	FSM	ENSG00000010278.15	ENST00000610354.5	1360	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1243.52462153952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6188951	True	NA	-4	True	AATAAA	-3	NA	6200326	6238247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6200892_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
WTC11_00021059	chr12	+	3346	6	FSM	ENSG00000010278.15	ENST00000677318.1	3345	6	-1	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	141.716618644392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAATTATGACAA	6188987	True	NA	-14	True	NA	NA	NA	6200362	6238237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475
WTC11_00021060	chr12	+	2917	16	NIC	ENSG00000008323.16	novel	2969	16	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	28.1089942110271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	6309546	True	NA	15	True	AATATA	-40	NA	6310691	6328506	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317898_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
WTC11_00021061	chr12	+	2981	16	FSM	ENSG00000008323.16	ENST00000396988.7	2963	16	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_1	33.9552646875267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGTGTGGTGGTGTGC	6309769	False	NA	14	True	AATATA	-39	NA	6310914	6328505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6311095_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
WTC11_00021065	chr12	+	2015	8	FSM	ENSG00000089692.9	ENST00000203629.3	1976	8	-39	0	-31	0	multi-exon	FALSE	canonical	2	3	junction_2	6.08779307218929	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	6772470	False	NA	4	True	AATAAA	-18	NA	6772480	6778455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
WTC11_00021066	chr12	+	3037	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	26	-14	14	14	multi-exon	FALSE	canonical	0	0	junction_6	6.25388767976457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTGTGTGTGTGTGTGT	6789542	False	NA	18	True	AATAAA	-31	NA	6789553	6820813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
WTC11_00021067	chr12	+	1673	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4502	9	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCGTGTGTGTGTGTG	6818282	True	NA	13	True	AATAAA	-26	NA	6818555	6820808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6818651_6818846_6818915_6819298
WTC11_00021068	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.1478150704935	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821663	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
WTC11_00021069	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	16.274276358902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	6829795	False	NA	23	True	AATAAA	-18	NA	6829827	6839846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
WTC11_00021070	chr12	+	1657	10	FSM	ENSG00000111664.11	ENST00000229264.8	1657	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGATGTTTGCCTTC	NA	False	NA	4	True	AATAAA	-17	NA	6840924	6847393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6841034_6841257_6841345_6841585_6841625_6842969_6843077_6843173_6843238_6843362_6843526_6843631_6843699_6843776_6843979_6845585_6845803_6846791
WTC11_00021071	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5031.48849469242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	6867503	True	NA	NA	False	NA	NA	NA	6868099	6870383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
WTC11_00021072	chr12	+	820	4	FSM	ENSG00000111669.15	ENST00000495834.1	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	13158	junction_2	618.747659928235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAACCGGGCCCAGGAG	6867872	False	NA	NA	False	NA	NA	NA	6868468	6869770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6868988_6869098_6869184_6869257_6869391_6869687
WTC11_00021073	chr12	+	2386	2	ISM	ENSG00000248593.3_ENSG00000240370.6	ENST00000451612.5	587	3	0	-1348	0	0	intron_retention	FALSE	canonical	3	8	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	6873466	False	NA	19	True	AATAAA	-31	NA	6873478	6885786	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_6873782_6883703
WTC11_00021074	chr12	+	1377	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	35	0	4	0	multi-exon	FALSE	canonical	2	5	junction_5	4.04145188432738	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	6904647	True	NA	-12	True	NA	NA	NA	6904825	6914194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
WTC11_00021075	chr12	+	1522	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	93	0	4	0	multi-exon	FALSE	canonical	2	5	junction_6	4.89481191400338	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	6904647	True	NA	23	True	AATAAA	-15	NA	6904825	6914229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
WTC11_00021076	chr12	+	4704	10	NNC	ENSG00000111676.15	novel	4702	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	42.7510739161913	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6927928	False	NA	28	True	AAAACA	-21	NA	6927953	6942321	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6928385_6933839_6934029_6934175_6934314_6934464_6934579_6935549_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
WTC11_00021077	chr12	+	4702	10	FSM	ENSG00000111676.15	ENST00000396684.3	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	40.8595909529147	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6927912	True	NA	28	True	AAAACA	-21	NA	6927958	6942321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6928385_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
WTC11_00021078	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	-15	15	-15	-15	multi-exon	FALSE	canonical	3	36	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGATCCAAGTCACTTGA	6962742	True	NA	13	True	AATAAA	-27	NA	6963230	6964432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6963349_6964200
WTC11_00021079	chr12	+	2508	11	FSM	ENSG00000182326.16	ENST00000402681.7	2522	11	14	0	14	0	multi-exon	TRUE	canonical	0	0	junction_2	9.68968523740581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAATTCCATTTACTTG	7060511	True	NA	-66	True	NA	NA	NA	7060698	7070960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061751_7061918_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
WTC11_00021080	chr12	+	292	2	FSM	ENSG00000139182.15	ENST00000542663.1	390	2	21	77	21	-77	multi-exon	FALSE	canonical	3	75	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGGGCTGGGCAGGGA	7150532	False	NA	NA	False	NA	NA	NA	7150543	7151073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7150690_7150927
WTC11_00021081	chr12	+	3162	15	NIC	ENSG00000139197.11	novel	2253	16	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_2	29.5356063221381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	7187099	True	NA	37	True	AATAAA	-18	NA	7189715	7211480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00021082	chr12	+	2105	16	FSM	ENSG00000139197.11	ENST00000412720.6	2105	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	32.1821206400214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGATCCCCGCTTTGGA	7189834	False	NA	NA	False	NA	NA	NA	7189844	7210256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7189981_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00021085	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	432.060366152694	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	7787382	True	NA	NA	False	NA	NA	NA	7787793	7794808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
WTC11_00021086	chr12	+	841	4	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_3	371.171418918836	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	7786224	True	NA	NA	False	NA	NA	NA	7789401	7794808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7789766_7792949_7793213_7794456_7794544_7794681
WTC11_00021087	chr12	+	1098	4	FSM	ENSG00000176654.12	ENST00000525030.5	915	4	-183	0	-183	0	multi-exon	FALSE	canonical	2	3	junction_3	17.8200885394982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGTGAAATTGATGTT	7892256	True	NA	NA	False	NA	NA	NA	7892392	7898903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7892727_7895476_7895740_7898264_7898352_7898489
WTC11_00021088	chr12	+	2220	4	ISM	ENSG00000176654.12	ENST00000607111.2	1982	6	1601	61	-174	-61	intron_retention	FALSE	canonical	3	18	junction_1	13.1993265821489	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTTGGCCTGATTTC	7892265	True	NA	7	True	AATAAA	-19	NA	7892401	7900079	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_7892727_7895476_7895740_7898264_7898352_7898534
WTC11_00021090	chr12	+	2132	2	FSM	ENSG00000089818.18	ENST00000640091.1	2115	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	277	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGTGCAATAATGGTA	8095239	False	NA	-21	True	TATAAA	-10	NA	8095260	8097730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8095704_8096041
WTC11_00021091	chr12	+	673	1	FSM	ENSG00000276417.1	ENST00000611627.1	1414	1	-666	1407	-666	-1407	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTGTCTGAAGTTCCT	NA	False	NA	NA	False	AATATA	-40	NA	8205317	8205990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8205300_8206000
WTC11_00021092	chr12	+	251	1	FSM	ENSG00000277952.1	ENST00000622868.1	216	1	-129	94	-129	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCATGATGCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	8340052	8340303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8340100_8340300
WTC11_00021094	chr12	+	621	1	FSM	ENSG00000243830.2	ENST00000477936.2	615	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAGTAAAGTTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	8460611	8461232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8460600_8461200
WTC11_00021095	chr12	+	8636	7	NIC	ENSG00000166532.16	novel	1589	9	NA	NA	-61	0	intron_retention	FALSE	canonical	3	24	junction_1	433.43780791866	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8681101	True	NA	35	True	AATAAA	-26	NA	8681538	8783095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8780740_8782911
WTC11_00021096	chr12	+	5040	6	NNC	ENSG00000166532.16	novel	4931	6	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	108.533128582935	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8686966	True	NA	10	True	AATATA	-21	NA	8697877	8777191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8698298_8713814_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
WTC11_00021097	chr12	+	8653	7	NIC	ENSG00000166532.16	novel	4931	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	221	junction_1	407.519904081043	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8687079	True	NA	25	True	AATAAA	-16	NA	8697990	8783085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8780740_8782911
WTC11_00021098	chr12	+	924	3	NNC	ENSG00000249790.3	novel	809	3	NA	NA	-706	300	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	576	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGTGTGACCAAGAAC	8787536	False	NA	NA	False	NA	NA	NA	8787546	8796089	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8787813_8787972_8788481_8795939
WTC11_00021099	chr12	+	3269	5	NNC	ENSG00000249790.3	novel	809	3	NA	NA	-706	300	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	478.730809014837	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGTGTGACCAAGAAC	8787536	False	NA	NA	False	NA	NA	NA	8787546	8796089	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8787813_8787972_8788787_8789999_8790264_8791509_8791650_8794304
WTC11_00021100	chr12	+	5124	35	ISM	ENSG00000166535.20	ENST00000299698.12	5127	36	475	-4	-417	4	3prime_fragment	FALSE	canonical	3	7	junction_1	11.5948025583354	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCTATGCATATTTC	8822940	False	NA	21	True	AATAAA	-23	NA	8823095	8876791	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_8823366_8823719_8823883_8829726_8829780_8834661_8834683_8835506_8835667_8836254_8836340_8837439_8837567_8838335_8838451_8839112_8839223_8841368_8841537_8843133_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8876057
WTC11_00021101	chr12	+	3940	15	NIC	ENSG00000111752.11	novel	618	6	NA	NA	9	-114	intron_retention	FALSE	canonical	3	259	junction_1	984.730308567907	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAATTGGTTTCAGTTG	8910934	False	NA	-87	True	ATTAAA	-23	NA	8913904	8940290	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
WTC11_00021103	chr12	+	2044	9	NNC	ENSG00000111752.11	novel	5033	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	762	junction_8	1063.4603233666	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	8933178	True	NA	18	True	ATTAAA	-21	NA	8933321	8941467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304_8939461_8940575
WTC11_00021104	chr12	+	4232	27	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	6777	855	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.909988130811	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	9281905	True	NA	NA	False	ATTAAA	-24	NA	9284011	9314096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9284351_9288201_9288350_9293661_9293911_9294029_9294247_9294431_9294519_9294816_9294975_9297780_9297827_9298420_9298529_9298779_9298868_9299259_9299469_9301093_9301247_9302227_9302275_9302622_9302703_9303974_9304020_9304139_9304208_9305718_9305758_9306014_9306124_9306236_9306369_9307201_9307315_9309872_9310021_9310338_9310442_9311140_9311291_9311549_9311619_9311730_9311832_9312616_9312696_9312874_9313030_9313104
WTC11_00021105	chr12	+	802	5	FSM	ENSG00000284634.1	ENST00000576948.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.2142335003061	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAGTAAGATTACAAGA	NA	False	NA	89	True	ATTAAA	-31	NA	9634591	9657302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9634697_9653682_9653809_9655872_9655980_9656567_9656650_9656920
WTC11_00021106	chr12	+	7037	4	ISM	ENSG00000069493.15_ENSG00000213443.2	ENST00000430909.5	850	5	-3181	-1362	-3181	264	intron_retention	FALSE	canonical	3	17	junction_1	5.35412613473634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGTGGGGAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	9677743	9696491	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_9681034_9687901_9688087_9692827_9692932_9693033
WTC11_00021107	chr12	+	6632	8	NNC	ENSG00000139083.11	novel	6144	8	NA	NA	-491	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	20.9742310311234	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTTTATAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-24	NA	11649182	11895377	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_11650161_11752452_11752580_11839139_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940
WTC11_00021108	chr12	+	1818	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	79	0	79	0	multi-exon	FALSE	canonical	1	1	junction_2	2.99332590941915	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	12071001	False	NA	NA	False	AATAAA	-25	NA	12071017	12099695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
WTC11_00021109	chr12	+	749	1	FSM	ENSG00000198134.3	ENST00000539347.1	327	1	-167	-255	-167	255	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACTTGTATTTTTTA	NA	False	NA	NA	False	TTTAAA	-1	NA	12110995	12111744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12111000_12111700
WTC11_00021110	chr12	+	487	1	FSM	ENSG00000270857.1	ENST00000604544.1	437	1	-465	415	-465	-415	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAAGTCCCTTGCAATT	NA	False	NA	NA	False	NA	NA	NA	12248525	12249012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12248500_12249000
WTC11_00021111	chr12	+	970	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	-34	-356	-33	295	multi-exon	TRUE	canonical	3	14	junction_1	37.1154355431208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTACGAAGCTCTG	NA	False	NA	3	True	AATAAA	-19	NA	12357044	12466139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
WTC11_00021112	chr12	+	1710	3	FSM	ENSG00000111276.12	ENST00000682080.1	2465	3	-7	762	-7	-762	multi-exon	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCAGTGAAAATGGCAA	12696324	False	NA	NA	False	NA	NA	NA	12696339	12714550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12697898_12699999_12700091_12714489
WTC11_00021113	chr12	+	2304	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	-412	2443	-412	-1435	multi-exon	FALSE	canonical	3	65	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAGTGGAGATTTTTC	12716941	False	NA	NA	False	AGTAAA	-35	NA	12716955	12719769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12718315_12718824
WTC11_00021114	chr12	+	1131	9	FSM	ENSG00000213782.7	ENST00000541537.5	1517	9	-6	392	-6	148	multi-exon	FALSE	canonical	3	645	junction_6	47.3192283855094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTTAATGGACTGT	NA	False	NA	NA	False	NA	NA	NA	12813309	12824715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539
WTC11_00021115	chr12	+	774	1	FSM	ENSG00000241352.3	ENST00000475592.2	759	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCGTGAGACGTTATCA	NA	False	NA	NA	False	NA	NA	NA	12850966	12851740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12851000_12851700
WTC11_00021116	chr12	+	678	2	Genic_Genomic	ENSG00000234498.3	novel	609	1	NA	NA	-4	7268	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAACATATTTAAAAA	NA	False	NA	NA	False	AAAACA	-1	NA	12875494	12883375	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_12876152_12883354
WTC11_00021119	chr12	+	4881	13	ISM	ENSG00000171681.13	ENST00000261168.9	8823	15	11	20286	0	-9	5prime_fragment	FALSE	canonical	3	278	junction_2	38.7544800277622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCCAGCCCACTGAC	14356361	True	NA	-2	True	ATTAAA	-10	NA	14365692	14482644	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
WTC11_00021120	chr12	+	619	3	FSM	ENSG00000171681.13	ENST00000535738.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	212	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTAGTTACATACATA	14478300	True	NA	NA	False	AAGAAA	-24	NA	14478335	14481906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14478473_14481002_14481186_14481607
WTC11_00021121	chr12	+	4810	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	14705453	14710263	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14705500_14710300
WTC11_00021122	chr12	+	390	2	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATACATGCAAGTCACAG	NA	False	NA	NA	False	NA	NA	NA	14705454	14710582	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14705630_14710367
WTC11_00021123	chr12	+	5220	4	NNC	ENSG00000214772.2	novel	657	5	NA	NA	39800	-24138	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_3	890.209837934605	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAATGGAAAAGGTGGC	NA	False	NA	NA	False	AAGAAA	-22	NA	14705454	14733825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_14705630_14705660_14710236_14718034_14718076_14733396
WTC11_00021126	chr12	+	979	4	FSM	ENSG00000008394.13	ENST00000396209.5	979	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1688.77891454809	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	16347741	True	NA	20	True	AATAAA	-15	NA	16347777	16364409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
WTC11_00021127	chr12	+	1842	1	FSM	ENSG00000008394.13	ENST00000624056.1	1842	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	16362440	False	NA	20	True	AATAAA	-15	NA	16362567	16364409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16362600_16364400
WTC11_00021129	chr12	+	379	1	Genic_Genomic	ENSG00000256211.1	novel	NA	NA	NA	NA	-4	-436	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTCAACAGGAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	16989121	16989500	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_16989100_16989500
WTC11_00021131	chr12	+	749	1	FSM	ENSG00000227525.4	ENST00000480903.1	738	1	74	-85	74	85	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGACTGCGACAATTT	NA	False	NA	NA	False	AATAAA	-40	NA	19089224	19089973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19089200_19090000
WTC11_00021132	chr12	+	583	1	FSM	ENSG00000243854.3	ENST00000492147.3	296	1	-406	119	-406	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGAGCCAGCCCAGTAG	NA	False	NA	NA	False	NA	NA	NA	19303073	19303656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19303100_19303700
WTC11_00021135	chr12	+	301	4	Antisense	novelGene_ENSG00000084453.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGATGATTAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	21255485	21269697	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_21255509_21266570_21266677_21267650_21267772_21269646
WTC11_00021139	chr12	+	1260	1	FSM	ENSG00000274987.1	ENST00000612734.1	582	1	-542	-136	-542	136	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGACCAGCCTGGCCAA	NA	False	NA	NA	False	NA	NA	NA	25210109	25211369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25210100_25211400
WTC11_00021140	chr12	+	6023	6	FSM	ENSG00000123094.16	ENST00000689635.1	5980	6	-43	0	-43	0	multi-exon	FALSE	canonical	3	28	junction_2	30.910192493739	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTGTCAGTTTGTTT	25957581	True	NA	NA	False	AATAAA	-22	NA	25958638	26072869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_25995036_25995131_26055235_26055447_26064497_26065388_26067568_26067714_26068696
WTC11_00021142	chr12	+	1391	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	-17	0	-13	0	multi-exon	FALSE	canonical	3	40	junction_1	254	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	27017974	True	NA	NA	False	GGGGCT	-9	NA	27022532	27029485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27022622_27027346_27027448_27028284
WTC11_00021145	chr12	+	4505	16	NNC	ENSG00000029153.15	novel	6785	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.2791222886189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTTAACTACTTTCTAA	27330851	True	NA	NA	False	AATAAA	-17	NA	27332919	27425289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395_27421221_27423392
WTC11_00021146	chr12	+	244	2	FSM	ENSG00000165935.9	ENST00000543991.1	486	2	0	242	0	-242	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGACACTGAAAAATGGGT	NA	False	NA	NA	False	NA	NA	NA	27470621	27472875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27470766_27472775
WTC11_00021147	chr12	+	687	3	FSM	ENSG00000165935.9	ENST00000541168.1	922	3	235	0	235	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTCTCACCAGTAAAC	NA	False	NA	-31	True	NA	NA	NA	27494070	27502147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27494357_27495679_27495856_27501922
WTC11_00021148	chr12	+	6054	29	NIC	ENSG00000110841.14	novel	5983	30	NA	NA	-40	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_10	25.4354675640941	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGCCCTTATTTCA	NA	False	NA	8	True	AATAAA	-21	NA	27524101	27695564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815_27658849_27660883_27660946_27664361_27664447_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
WTC11_00021149	chr12	+	4259	12	ISM	ENSG00000110841.14	ENST00000318304.12	6001	29	152222	-2	0	2	3prime_fragment	FALSE	canonical	3	66	junction_3	16.9344872819974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCCTTATTTCATT	NA	False	NA	10	True	AATAAA	-23	NA	27676427	27695566	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
WTC11_00021151	chr12	+	1673	14	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	5	8	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	47.1345800771923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTTGTTTTCTTTCC	28187489	True	NA	NA	False	TATAAA	-1	NA	28190450	28549248	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28225794_28225862_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00021153	chr12	+	205	1	FSM	ENSG00000123106.11	ENST00000624946.1	2173	1	704	1264	704	297	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCAAATAAACCTCTTT	NA	False	NA	NA	False	NA	NA	NA	28580042	28580247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28580000_28580200
WTC11_00021157	chr12	+	3677	27	NIC	ENSG00000013573.17	novel	3717	27	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	130.556869424194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTGAGTTTTTTATT	31067682	False	NA	13	True	AATAAA	-14	NA	31073892	31104789	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31073970_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103321_31103396_31103576_31103732_31103806
WTC11_00021158	chr12	+	4136	28	NIC	ENSG00000013573.17	novel	652	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	125.771201241494	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31071285	True	NA	15	True	AATAAA	-16	NA	31074215	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31074328_31077944_31078289_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00021159	chr12	+	4076	28	NNC	ENSG00000013573.17	novel	652	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	142.918089292131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31071333	True	NA	15	True	AATAAA	-16	NA	31074263	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_31074328_31077944_31078108_31078194_31078289_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
WTC11_00021160	chr12	+	2045	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	10	0	10	0	multi-exon	FALSE	canonical	2	5	junction_2	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	31659003	True	NA	NA	False	TTTAAA	-40	NA	31659196	31668967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
WTC11_00021161	chr12	+	5731	4	FSM	ENSG00000139160.13	ENST00000357721.3	6128	4	85	312	62	-312	multi-exon	FALSE	canonical	1	1	junction_1	3.68178700572909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCAATAGGTACGGTAAA	31659579	False	NA	NA	False	ATTAAA	-3	NA	31659772	31672802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31659790_31661840_31662268_31666086_31666218_31667646
WTC11_00021162	chr12	+	2715	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	-634	7	-634	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGTTTGAATTTTAT	NA	False	NA	6	True	AATAAA	-14	NA	31728482	31731197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31728500_31731200
WTC11_00021164	chr12	+	6303	5	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	-196	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	97.355020414974	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	31959077	True	NA	2	True	AATAAA	-19	NA	31959173	31993103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31959492_31960776_31960872_31980877_31985958_31987238_31987323_31992377
WTC11_00021165	chr12	+	814	4	FSM	ENSG00000174718.12	ENST00000397578.7	814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	108.962786715873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTGTTTTATAACTAA	31950936	True	NA	-11	True	AATATA	-3	NA	31959448	31992969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31987238_31987323_31992377
WTC11_00021166	chr12	+	883	1	FSM	ENSG00000276136.1	ENST00000616998.1	848	1	-553	518	-553	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCGTTGTTGTTTTTA	31999808	False	NA	11	True	AATAAA	-18	NA	31999821	32000704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31999800_32000700
WTC11_00021167	chr12	+	1962	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAATCTAATTTTTGTG	32102313	True	NA	17	True	AATAAA	-28	NA	32106834	32108796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32106800_32108800
WTC11_00021169	chr12	+	1383	2	NNC	ENSG00000139132.16	novel	549	3	NA	NA	134	-101852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATCTTAAAAATGTAC	32397020	False	NA	10	True	AATAAA	-21	NA	32399691	32474446	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_32399960_32473331
WTC11_00021172	chr12	+	601	2	FSM	ENSG00000087470.19	ENST00000547719.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAGGAAATAATAAGGT	32706817	False	NA	NA	False	AAGAAA	-21	NA	32706866	32708206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32707414_32708152
WTC11_00021173	chr12	+	556	3	FSM	ENSG00000087470.19	ENST00000549157.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGACTCATTAAATCATATT	32737961	True	NA	NA	False	NA	NA	NA	32737976	32740467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32738297_32740063_32740241_32740408
WTC11_00021177	chr12	+	2958	16	FSM	ENSG00000018236.15	ENST00000547702.5	3033	16	-23	98	-20	-98	multi-exon	FALSE	canonical	1	4	junction_15	22.6582337254155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTTTGAAAATACCTT	NA	False	NA	NA	False	ATTAAA	-40	NA	40692418	40972337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_40692593_40908356_40908494_40910072_40910106_40918638_40918772_40922255_40922429_40924556_40924653_40929795_40930003_40933460_40933561_40933696_40933879_40936780_40936906_40937569_40937688_40939334_40939486_40943596_40943725_40943994_40944171_40959113_40959235_40971433
WTC11_00021179	chr12	+	299	2	Genic_Genomic	ENSG00000257674.1	novel	1650	1	NA	NA	1373	1051	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTTTGGAAGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	42288283	42289611	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_42288463_42289491
WTC11_00021181	chr12	+	3470	12	NIC	ENSG00000134283.18	novel	2170	13	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	140.453868783307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATTTAAGTAGATTGT	42320993	True	NA	7	True	AATAAA	-4	NA	42326181	42448607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
WTC11_00021184	chr12	+	4143	11	FSM	ENSG00000198001.15	ENST00000431837.5	4147	11	0	4	0	-2	multi-exon	FALSE	canonical	2	7	junction_1	5.93632883186233	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAAGTGCTTTAATTT	43758469	True	NA	3	True	ATTAAA	-14	NA	43758943	43789539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
WTC11_00021186	chr12	+	2775	8	FSM	ENSG00000139173.10	ENST00000266534.8	2775	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.81395937194174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTATGTGATGTAGTTT	43836002	False	NA	2	True	AATAAA	-17	NA	43836080	44389758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_43836197_43844623_43844929_43944209_43944343_44143524_44143625_44211289_44211388_44299579_44299740_44376594_44376725_44388025
WTC11_00021187	chr12	+	690	3	Antisense	novelGene_ENSG00000111371.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0.5	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTTAATTTGTTCT	46268846	True	NA	NA	False	ATTAAA	-21	NA	46269061	46279207	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_46269159_46275200_46275376_46278789
WTC11_00021196	chr12	+	1905	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	-1429	0	5	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGCATGTGTCTAT	47223509	True	NA	22	True	AATAAA	-33	NA	47223544	47236667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47223673_47223923_47224040_47235006
WTC11_00021197	chr12	+	1824	2	NNC	ENSG00000179715.13	novel	1862	3	NA	NA	189	5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGCATGTGTCTAT	47223715	False	NA	22	True	AATAAA	-33	NA	47223733	47236667	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_47223897_47235006
WTC11_00021204	chr12	+	259	1	FSM	ENSG00000274124.1	ENST00000618623.1	312	1	-7	60	-7	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTGAGCTCAATGGAT	48152798	False	NA	NA	False	AATAAA	-12	NA	48152809	48153068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48152800_48153100
WTC11_00021208	chr12	+	5874	1	NIC	ENSG00000139537.11	novel	2084	9	NA	NA	-3913	-859	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTGTCTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48914230	48920104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48914200_48920100
WTC11_00021210	chr12	+	581	2	FSM	ENSG00000258017.3	ENST00000551496.1	319	2	-75	-187	29	183	multi-exon	FALSE	canonical	2	2	junction_1	0	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAAGGAGTGTGGGAG	49131560	False	NA	NA	False	NA	NA	NA	49131634	49148052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49131826_49147662
WTC11_00021218	chr12	+	1386	11	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	241	1158	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_10	127.901368249132	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGACTCTGAAATACTT	50400076	True	NA	11	True	AATAAA	-19	NA	50401433	50456120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428916_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455901
WTC11_00021219	chr12	+	1496	11	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	246	-1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	85.006117426924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGAGTTGGTTGCTTTTT	50400081	True	NA	NA	False	AATAAA	-16	NA	50401438	50461486	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
WTC11_00021220	chr12	+	1754	11	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	250	1158	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	116.30030094544	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGACTCTGAAATACTT	50400085	False	NA	11	True	AATAAA	-19	NA	50401442	50456120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
WTC11_00021222	chr12	+	473	4	FSM	ENSG00000050426.16	ENST00000547029.5	455	4	-18	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	32.355662392986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACACATTTCTGTGGT	51045092	True	NA	NA	False	NA	NA	NA	51048300	51058128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048372_51049033_51049186_51056349_51056503_51058031
WTC11_00021223	chr12	+	1497	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	-17	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	33.0340733183179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	51045118	True	NA	NA	False	NA	NA	NA	51048326	51060303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
WTC11_00021224	chr12	+	1679	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	-14	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	34.5056517109879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	51045118	True	NA	-34	True	NA	NA	NA	51048326	51060369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
WTC11_00021226	chr12	+	1935	8	NIC	ENSG00000050426.16	novel	2106	9	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.3516254387714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAATGACTTATGCATAC	51045130	True	NA	12	True	AGTAAA	-21	NA	51048338	51060415	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
WTC11_00021227	chr12	+	1623	4	FSM	ENSG00000050426.16	ENST00000552645.5	1623	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.7211994624891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045665	False	NA	18	True	AGTAAA	-27	NA	51048873	51060421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51049186_51056349_51056503_51058031_51058129_51059360
WTC11_00021229	chr12	+	2948	1	FSM	ENSG00000050426.16	ENST00000623495.1	2948	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTATGCATACTCT	51057454	False	NA	15	True	AGTAAA	-24	NA	51057470	51060418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51057500_51060400
WTC11_00021232	chr12	+	1828	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.592106351271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	51234885	True	NA	NA	False	AATAAA	-44	NA	51238885	51243785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
WTC11_00021239	chr12	+	3336	2	FSM	ENSG00000167612.13	ENST00000548526.1	3319	2	-17	0	-17	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTATATGGCATATTAT	51888020	True	NA	NA	False	AGTAAA	-19	NA	51888085	51891657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51888332_51888567
WTC11_00021249	chr12	+	545	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	-17	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1406.06089839665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53295471	False	NA	31	True	AATAAA	-21	NA	53295491	53299452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
WTC11_00021250	chr12	+	576	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	-17	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1606.84852661973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
WTC11_00021251	chr12	+	2281	11	FSM	ENSG00000288663.1	ENST00000676632.1	2281	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	1431.56043882192	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTCATACCTCCCACAAAT	53274170	True	NA	-36	True	NA	NA	NA	53295524	53307122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303173_53305907_53306061_53306201_53306321_53306679_53306862_53306965
WTC11_00021254	chr12	+	826	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	-16	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	864.411296136792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	53433768	True	NA	34	True	AATAAA	-27	NA	53441731	53446645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
WTC11_00021255	chr12	+	2742	12	FSM	ENSG00000197111.16	ENST00000455667.7	2741	12	-1	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	213.18912567433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAATACGAGTGGCTTT	53454474	True	NA	10	True	TATAAA	-15	NA	53454735	53481162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
WTC11_00021256	chr12	+	766	7	NNC	ENSG00000197111.16	novel	1418	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	337.059712810653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53460616	True	NA	32	True	ATTAAA	-16	NA	53461014	53479614	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53461143_53462479_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
WTC11_00021257	chr12	+	1054	8	FSM	ENSG00000197111.16	ENST00000547859.2	1919	8	-121	986	0	0	multi-exon	FALSE	canonical	3	370	junction_5	223.361151684067	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACAGTGATTCATGTG	53460616	True	NA	39	True	ATTAAA	-39	NA	53461014	53479821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
WTC11_00021262	chr12	+	2793	10	FSM	ENSG00000135486.19	ENST00000677210.1	2793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_7	5290.21785824122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	54280641	False	NA	139	True	NA	NA	NA	54280662	54285842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257
WTC11_00021263	chr12	+	1987	8	FSM	ENSG00000135486.19	ENST00000676725.1	1987	8	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_5	1684.61599815047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTGAATGAAATGACAAC	54066770	True	NA	7	True	AATAAA	-11	NA	54280697	54285238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282875_54283811_54283968_54284257_54284318_54284548
WTC11_00021273	chr12	+	1248	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	205	5	205	-5	multi-exon	FALSE	canonical	3	16	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	55728850	False	NA	19	True	NA	NA	NA	55729298	55730852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55729356_55729661
WTC11_00021274	chr12	+	768	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	14	junction_1	186.456429226777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	55813064	True	NA	20	True	NA	NA	NA	55818032	55820712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
WTC11_00021278	chr12	+	604	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	-11	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	16.9771087709958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	55829925	True	NA	NA	False	NA	NA	NA	55830827	55835047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
WTC11_00021284	chr12	+	595	2	FSM	ENSG00000229117.9	ENST00000552314.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	23355	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCATCGCCCTCTGA	56116716	False	NA	NA	False	NA	NA	NA	56116780	56117645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56117212_56117481
WTC11_00021287	chr12	+	513	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	-11	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	4304.06126350451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099285	True	NA	26	True	AATAAA	-14	NA	56158345	56161574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
WTC11_00021288	chr12	+	1487	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	-12	-812	-12	0	multi-exon	FALSE	canonical	2	17	junction_1	90.1437124201621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	56221797	True	NA	4	True	AATAAA	-4	NA	56222002	56229844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
WTC11_00021289	chr12	+	1369	4	FSM	ENSG00000135469.14	ENST00000546544.5	1369	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	15.556349186104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	56267388	False	NA	NA	False	AATAAA	-14	NA	56267681	56270964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267941_56269058_56269252_56269459_56269562_56270149
WTC11_00021291	chr12	+	443	3	FSM	ENSG00000257303.3	ENST00000549565.3	485	3	36	6	-1	-6	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCCAGAGTGAGCTA	56300075	True	NA	NA	False	ATTAAA	-31	NA	56300111	56314802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56300188_56312406_56312500_56314528
WTC11_00021294	chr12	+	8438	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	50	0	50	0	multi-exon	FALSE	canonical	2	12	junction_4	6.4450338663549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	NA	False	NA	6	True	TATAAA	-33	NA	56521869	56596193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
WTC11_00021296	chr12	+	1523	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	24	0	-10	0	multi-exon	FALSE	canonical	2	3	junction_1	7.82304288624318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	56752331	True	NA	NA	False	NA	NA	NA	56752476	56787576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
WTC11_00021297	chr12	+	1733	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	13	5	5	-5	multi-exon	FALSE	canonical	2	4	junction_2	7.33757453113766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTTTTTGTCAGCAG	56752316	True	NA	13	True	AATAAA	-18	NA	56752461	56787785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
WTC11_00021300	chr12	+	1369	6	FSM	ENSG00000182199.11	ENST00000557529.1	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_5	37.0729011543472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTTTTATCTAATAAA	57232448	False	NA	2	True	NA	NA	NA	57232460	57234694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002
WTC11_00021302	chr12	+	555	5	FSM	ENSG00000166986.15	ENST00000552499.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	732.349984638492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAGCTGAGACCTTTC	57515138	True	NA	8	True	AATAAA	-18	NA	57515180	57516648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57515337_57515919_57515992_57516138_57516159_57516244_57516338_57516434
WTC11_00021303	chr12	+	3757	15	NIC	ENSG00000166987.15	novel	4202	13	NA	NA	-102	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	21.0423528210345	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTCTGGCTCTGT	57522478	False	NA	4	True	NA	NA	NA	57522721	57530141	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57523012_57524028_57524093_57524279_57524417_57524719_57524823_57524952_57525116_57525347_57526389_57526565_57527228_57527506_57527661_57527847_57528018_57528146_57528561_57528665_57528719_57528945_57529010_57529159_57529330_57529610_57529675_57529933
WTC11_00021305	chr12	+	310	2	FSM	ENSG00000155980.13	ENST00000675907.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGTGTTAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	57578237	57581172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57578331_57580955
WTC11_00021306	chr12	+	1619	2	FSM	ENSG00000155980.13	ENST00000674980.1	1619	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTAAATATTCTTT	NA	False	NA	16	True	AATAAA	-22	NA	57583100	57586633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57583216_57585129
WTC11_00021307	chr12	+	608	5	FSM	ENSG00000166908.18	ENST00000550360.1	608	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.0221487938666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTTGTGATGCGCA	57587820	True	NA	NA	False	NA	NA	NA	57591245	57599144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57591435_57594024_57594123_57595125_57595223_57595887_57596032_57599064
WTC11_00021309	chr12	+	2719	6	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	84	junction_1	20.9914268214431	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57603077	True	NA	17	True	AATAAA	-23	NA	57604842	57609800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
WTC11_00021311	chr12	+	2578	15	FSM	ENSG00000240771.8	ENST00000286494.9	2554	15	-26	2	-26	0	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTGCTGTCTTGGCA	57611126	True	NA	18	True	AATAAA	-16	NA	57611408	57617243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57611992_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
WTC11_00021312	chr12	+	2759	15	NIC	ENSG00000135506.16	novel	2682	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	189.153821973935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACCATGTTCTTGAAC	57693992	False	NA	-35	True	AAAAAG	-9	NA	57694003	57721503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
WTC11_00021316	chr12	+	2246	7	FSM	ENSG00000257921.6	ENST00000651284.1	2246	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	212.950437634885	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGTTATTAAACAT	57772519	False	NA	-17	True	AAAACA	-25	NA	57772659	57797554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57772902_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
WTC11_00021318	chr12	+	1142	7	NNC	ENSG00000123297.20	novel	1218	7	NA	NA	0	71043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	172.04230745824	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTGAGAGGACTAGAAAG	57777774	True	NA	NA	False	NA	NA	NA	57782817	57879114	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176_57796735_57879085
WTC11_00021321	chr12	+	2997	20	NIC	ENSG00000135655.16	novel	1087	7	NA	NA	333	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	45.7169419489475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATTAATTAT	62305912	False	NA	23	True	AATAAA	-16	NA	62305927	62404643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_62306059_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
WTC11_00021332	chr12	+	3193	20	FSM	ENSG00000183735.11	ENST00000676654.1	3204	20	11	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	14.3685174471415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTAATTCTGCTTAC	64448440	True	NA	-46	True	ATTAAA	-35	NA	64452100	64502053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64498040_64501329
WTC11_00021338	chr12	+	1902	4	FSM	ENSG00000149948.14	ENST00000354636.7	1529	4	-348	-25	-348	25	multi-exon	FALSE	canonical	1	3	junction_3	8.60232526704263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAATATCACATGACTT	65824094	False	NA	29	True	CATAAA	-44	NA	65824111	65915552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65915058
WTC11_00021344	chr12	+	2001	8	NIC	ENSG00000127314.18	novel	2049	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	241.292861266054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCACTTGAATGTG	68602542	True	NA	30	True	AATAAA	-33	NA	68610898	68660522	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_68611053_68648705_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
WTC11_00021349	chr12	+	6780	10	NIC	ENSG00000166225.9	novel	6768	9	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	43.5966359558472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTTAAAAGTTTTATT	69468193	True	NA	18	True	AATAAA	-26	NA	69470431	69579781	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_69470531_69530864_69530961_69532013_69532057_69537915_69537984_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
WTC11_00021350	chr12	+	1757	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.0754669427967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734891	True	NA	14	True	AATAAA	-15	NA	69738859	69815723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
WTC11_00021351	chr12	+	1615	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	-2	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	64.9591217613046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734891	True	NA	14	True	AATAAA	-15	NA	69738859	69815723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
WTC11_00021352	chr12	+	9665	11	FSM	ENSG00000127328.22	ENST00000550536.5	9646	11	-22	3	-22	2	multi-exon	FALSE	canonical	3	11	junction_1	56.3883853288955	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTATCTACATCCTAG	69739343	False	NA	16	True	AATAAA	-21	NA	69739367	69823201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69739870_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
WTC11_00021355	chr12	+	582	6	FSM	ENSG00000111596.14	ENST00000551661.5	571	6	-11	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	231.561136635663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGAATTTTGTATTTAT	70243382	False	NA	NA	False	NA	NA	NA	70243409	70319363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70243481_70278131_70278275_70294236_70294295_70297758_70297880_70310894_70311018_70319297
WTC11_00021356	chr12	+	2867	16	FSM	ENSG00000111596.14	ENST00000229195.8	2844	16	-23	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	47.8230999506399	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	70243382	False	NA	11	True	AATAAA	-19	NA	70243409	70354993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
WTC11_00021359	chr12	+	2854	16	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	176.458569263912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	70278084	True	NA	11	True	AATAAA	-19	NA	70278131	70354993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_70278275_70294236_70294295_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
WTC11_00021360	chr12	+	1233	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	23	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.6478781734053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGAAAACTCATTAAATG	71686308	True	NA	NA	False	NA	NA	NA	71686518	71704153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
WTC11_00021361	chr12	+	1247	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	34.4270565431061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	71686344	False	NA	NA	False	AATAAA	-19	NA	71686554	71704056	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
WTC11_00021363	chr12	+	2000	16	FSM	ENSG00000121749.16	ENST00000462788.6	1995	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	5	junction_4	33.8037473267881	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	71837685	True	NA	8	True	ATTAAA	-19	NA	71839753	71923362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
WTC11_00021366	chr12	+	4462	10	NNC	ENSG00000067715.14	novel	3095	12	NA	NA	-469	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	39.9137959997682	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	79044844	True	NA	13	True	AATAAA	-21	NA	79045161	79452008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_79045388_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
WTC11_00021372	chr12	+	2682	6	FSM	ENSG00000179104.9	ENST00000548305.5	2682	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.22710574513201	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGTTTCTCAGAGCA	82686675	False	NA	NA	False	AATAAA	-19	NA	82687000	82965971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_82687670_82857009_82857581_82895817_82896647_82930430_82930546_82965023_82965110_82965559
WTC11_00021379	chr12	+	845	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	45.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	93676830	True	NA	NA	False	AATAAA	-24	NA	93677368	93738636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93677473_93678768_93679073_93738199
WTC11_00021384	chr12	+	2601	10	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	100.090822953486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214245	True	NA	14	True	AATAAA	-18	NA	95217822	95301172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00021389	chr12	+	3777	13	ISM	ENSG00000139350.12	ENST00000411739.6	2490	14	228	-1212	0	-93	3prime_fragment	FALSE	canonical	3	30	junction_1	56.3219909685965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGGAAACATGAAATTGA	96907410	False	NA	11	True	AATAAA	-16	NA	96907465	96953687	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
WTC11_00021395	chr12	+	1359	8	FSM	ENSG00000075415.15	ENST00000551917.5	1359	8	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	1437.31076837891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	98549577	True	NA	15	True	AATAAA	-15	NA	98593649	98601707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593978_98594136_98595432_98595558_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
WTC11_00021403	chr12	+	2945	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	100	junction_9	60.7581727470104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117106	True	NA	9	True	AATAAA	-23	NA	102120177	102197520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
WTC11_00021420	chr12	+	8891	52	NIC	ENSG00000076555.16	novel	3654	26	NA	NA	-46	1	combination_of_known_junctions	TRUE	canonical	2	6	junction_14	5.3149915285066	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCCTTGACTTT	109153479	True	NA	16	True	AATAAA	-16	NA	109154635	109268224	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274_109172357_109174131_109174231_109175930_109176041_109176152_109176264_109179087_109179298_109179916_109180088_109185578_109185741_109187998_109188163_109191612_109191764_109191846_109191951_109193647_109193730_109197007_109197154_109199401_109199553_109201566_109201702_109206709_109206857_109209164_109209354_109212835_109212937_109216617_109216707_109216795_109216921_109222506_109222621_109222798_109222913_109223814_109223905_109227370_109227490_109232668_109232807_109233747_109233848_109233937_109234046_109235312_109235370_109235605_109235648_109237164_109237381_109239829_109239986_109241077_109241282_109242436_109242593_109245625_109245749_109246178_109246449_109247605_109247704_109249983_109250105_109252045_109252157_109253014_109253159_109254213_109254335_109256139_109256237_109258267_109258365_109258972_109259109_109260479_109260658_109262356_109262470_109264231_109264387_109265109_109265281_109265388_109265526_109266235
WTC11_00021423	chr12	+	2589	9	FSM	ENSG00000110921.14	ENST00000625889.2	2591	9	2	0	2	0	multi-exon	FALSE	canonical	3	17	junction_3	45.8146742321715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTCACTGTGGACTAGG	109572732	False	NA	NA	False	CATAAA	-23	NA	109574808	109598117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
WTC11_00021437	chr12	+	1525	12	FSM	ENSG00000204852.17	ENST00000549123.6	1531	12	6	0	-5	0	multi-exon	TRUE	canonical	0	0	junction_9	12.9926870721715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613258	True	NA	10	True	ATTAAA	-18	NA	110614118	110649128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110647210_110647337_110647748_110647894_110649042
WTC11_00021438	chr12	+	1873	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	6	0	-5	0	multi-exon	FALSE	non_canonical	1	2	junction_5	15.773427668334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613258	True	NA	10	True	ATTAAA	-18	NA	110614118	110649128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
WTC11_00021446	chr12	+	3883	20	NIC	ENSG00000111271.15	novel	4006	21	NA	NA	-18	0	intron_retention	FALSE	canonical	2	25	junction_13	25.8827528966091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	111683150	True	NA	18	True	AGTAAA	-15	NA	111686034	111757099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
WTC11_00021447	chr12	+	2607	16	NIC	ENSG00000111271.15	novel	2951	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	39.588999594444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	111683194	True	NA	NA	False	AATAAA	-18	NA	111686078	111749132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
WTC11_00021448	chr12	+	2523	12	NIC	ENSG00000111271.15	novel	2888	13	NA	NA	0	-204	combination_of_known_junctions	FALSE	canonical	2	10	junction_9	35.2994275701017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTCTGTGTTGTCTCC	111683196	True	NA	NA	False	NA	NA	NA	111686080	111745430	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111733922_111734069_111736830_111737005_111744642
WTC11_00021456	chr12	+	2041	4	FSM	ENSG00000139405.16	ENST00000549621.5	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	94.7839648885823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGAATGTCACTTTTTT	113185401	True	NA	9	True	AATAGA	-14	NA	113185525	113192364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113186022_113186192_113186317_113186682_113187049_113191309
WTC11_00021467	chr12	+	1539	8	NIC	ENSG00000135119.15	novel	2415	11	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	12.5112194547493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTGGTATGAATTTGC	116734438	True	NA	NA	False	AATAAA	-17	NA	116738312	116810519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116810073
WTC11_00021468	chr12	+	739	3	FSM	ENSG00000135119.15	ENST00000551251.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGCCATGCCTGTTAA	NA	False	NA	12	True	AATAAA	-24	NA	116835996	116852945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116836026_116836180_116836283_116852337
WTC11_00021479	chr12	+	3000	16	NIC	ENSG00000022840.17	novel	3814	17	NA	NA	0	-3	intron_retention	FALSE	canonical	3	82	junction_13	230.872682566725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACACAAGAGATCTCTTC	120517279	True	NA	8	True	AATAAA	-4	NA	120534355	120576875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563346_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
WTC11_00021497	chr12	+	1997	9	ISM	ENSG00000175727.14	ENST00000319080.12	8390	17	7	13183	7	-3	5prime_fragment	FALSE	canonical	3	120	junction_5	9.18473597878567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCCGTTTTCTATGCTC	122073691	True	NA	24	True	AATACA	-11	NA	122078762	122134161	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_122079267_122127255_122127363_122127882_122127969_122129136_122129227_122129587_122129630_122129940_122130113_122130843_122130934_122132291_122132384_122133347
WTC11_00021502	chr12	+	1229	7	NIC	ENSG00000111325.16	novel	1780	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	48.9129044549822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122973495	True	NA	8	True	AATAAA	-20	NA	122975249	122979438	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
WTC11_00021503	chr12	+	1033	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	675.953667051226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122979153	False	NA	14	True	ATTAAA	-14	NA	122980283	122982906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00021504	chr12	+	955	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	639.087912575414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122968681	True	NA	17	True	ATTAAA	-17	NA	122980715	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00021505	chr12	+	1055	6	NIC	ENSG00000182196.14	novel	1023	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_2	676.238596946374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122968681	True	NA	17	True	ATTAAA	-17	NA	122980715	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980813_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00021506	chr12	+	1084	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	675.953667051226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122968700	True	NA	14	True	ATTAAA	-14	NA	122980734	122982906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980888_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00021509	chr12	+	466	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	286	5	19	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGCTTGGGTAATAAGCA	123364740	True	NA	43	True	NA	NA	NA	123364952	123365827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123365116_123365524
WTC11_00021510	chr12	+	2990	7	NIC	ENSG00000183955.14	novel	725	4	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	37.2443135107749	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	123387450	False	NA	3	True	ATTAAA	-19	NA	123388769	123409353	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123389183_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
WTC11_00021520	chr12	+	2892	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	19	-398	17	6	multi-exon	FALSE	canonical	1	5	junction_4	5.02381869948145	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGCCCTGTGACTTTA	123670129	True	NA	31	True	AATAAA	-32	NA	123671131	123708405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
WTC11_00021524	chr12	+	4250	5	NIC	ENSG00000179195.16	novel	4262	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	5.53962995154008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	123967957	True	NA	16	True	AATAAA	-17	NA	123973226	124015426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123973304_123973885_123974021_123988042_123988139_124011380_124011442_124011545
WTC11_00021530	chr12	+	642	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	87.1869001373231	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131796065	True	NA	17	True	AATAAA	-29	NA	131796124	131799738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
WTC11_00021532	chr12	+	2223	11	NNC	ENSG00000198598.7	novel	2411	10	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.8547365904219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGCTCGGCTGGGCTC	131825133	True	NA	7	True	NA	NA	NA	131828387	131851771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_131828494_131828549_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849938_131850060_131850924
WTC11_00021538	chr12	+	544	3	FSM	ENSG00000185684.16	ENST00000685528.1	554	3	5	5	-2	-5	multi-exon	FALSE	canonical	2	12	junction_2	4	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGTCTCTCTCCTAAA	132082821	True	NA	-2	True	AATAAA	-44	NA	132084287	132085776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132084400_132085256_132085317_132085404
WTC11_00021541	chr12	+	7586	13	NIC	ENSG00000185684.16	novel	2741	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	12.2233269702738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTCTCTTGTCTTT	132082846	True	NA	NA	False	AATATA	-1	NA	132084312	132131639	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132084400_132090848_132090944_132103996_132104171_132104377_132105305_132108571_132108683_132109767_132109833_132114457_132114546_132120419_132120602_132121439_132121580_132121924_132121981_132125193_132125397_132125853_132126048_132126375
WTC11_00021543	chr12	+	3925	19	NNC	ENSG00000112787.14	novel	4839	19	NA	NA	19	-892	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	107.428083897445	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132487383	True	NA	18	True	ATTAAA	-17	NA	132490169	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132490862_132508152_132508351_132525733_132525824_132527952_132527989_132548002_132548033_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021545	chr12	+	3178	15	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	-61	-892	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	82.3864710510463	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132555404	True	NA	18	True	ATTAAA	-17	NA	132559985	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021546	chr12	+	3241	16	NIC	ENSG00000112787.14	novel	1246	9	NA	NA	-52	-892	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	74.3511189484657	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132555413	True	NA	18	True	ATTAAA	-17	NA	132559994	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571137_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021547	chr12	+	3134	15	NIC	ENSG00000112787.14	novel	1246	9	NA	NA	-68	-892	combination_of_known_junctions	FALSE	canonical	3	148	junction_5	48.9312303761355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132555397	True	NA	18	True	ATTAAA	-17	NA	132559978	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021548	chr12	+	3063	15	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_3	49.7094106805148	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132555465	True	NA	18	True	ATTAAA	-17	NA	132560046	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021550	chr12	+	3175	16	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	82.105514769445	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	132560109	True	NA	18	True	ATTAAA	-17	NA	132560152	132584296	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
WTC11_00021552	chr12	+	2798	6	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_4	54.1331691294718	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698977	True	NA	16	True	AATAAA	-25	NA	132710851	132722734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717989_132718121_132720677
WTC11_00021556	chr12	+	4544	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	-32	-2343	7	-154	multi-exon	FALSE	canonical	3	31	junction_1	6.17960354715414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGAAGATTATGCAGGC	133129658	True	NA	25	True	AATAAA	-38	NA	133130594	133159311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
WTC11_00021561	chr12	-	2499	14	FSM	ENSG00000002016.18	ENST00000468231.5	2499	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	10.2881559983388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGCATTTTTTGAAT	-948654	True	NA	-7	True	AATATA	-36	NA	949641	912488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_913453_913893_914122_914430_914533_916343_916484_916638_916821_925449_925526_926795_926947_927144_927264_929763_929887_930050_930145_931219_931322_932974_933077_936806_936883_949601
WTC11_00021562	chr12	-	3207	2	FSM	ENSG00000250132.6	ENST00000503602.6	3207	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTTCCCACATCTTC	-989934	False	NA	NA	False	AATAAA	-22	NA	990041	974132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_977107_989808
WTC11_00021563	chr12	-	2822	2	FSM	ENSG00000171823.7	ENST00000339235.4	2527	2	-301	6	-301	-6	multi-exon	FALSE	canonical	2	12	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCATTTGGGTTTTTTGT	NA	False	NA	-5	True	AATATA	-19	NA	1594882	1565998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1566811_1592872
WTC11_00021564	chr12	-	781	1	FSM	ENSG00000243663.1	ENST00000493072.1	781	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCCCTGGGTGACATG	NA	False	NA	NA	False	AAGAAA	-37	NA	1758011	1757230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1757200_1758000
WTC11_00021565	chr12	-	2420	2	FSM	ENSG00000111206.13	ENST00000536066.1	2518	2	99	-1	-45	0	multi-exon	FALSE	canonical	3	305	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGTGGTTTATTGG	-2864744	False	NA	-5	True	AATAAA	-18	NA	2864755	2857679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319
WTC11_00021570	chr12	-	388	2	Genic_Genomic	ENSG00000227081.5	novel	255	1	NA	NA	-35	55170	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAGCAAAGTCCAAG	NA	False	NA	NA	False	AAAACA	-17	NA	3211952	3156492	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_3156521_3211592
WTC11_00021571	chr12	-	638	2	FSM	ENSG00000250770.4	ENST00000686448.1	680	2	15	27	-6	-27	multi-exon	FALSE	canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAACACCCTTTCATAT	-3365998	True	NA	-22	True	NA	NA	NA	3366097	3331793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3332393_3366058
WTC11_00021572	chr12	-	2505	3	FSM	ENSG00000118972.3	ENST00000237837.2	3002	3	278	219	278	-219	multi-exon	FALSE	canonical	3	3	junction_2	1	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATCCTCTTTGTAGTAC	-4379348	False	NA	NA	False	AATAAA	-27	NA	4379434	4368445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4370784_4372593_4372698_4379371
WTC11_00021573	chr12	-	1339	6	FSM	ENSG00000067182.8	ENST00000366159.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.6703481069937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGGCTTGGGGGTTA	-6341836	False	NA	NA	False	NA	NA	NA	6341848	6331239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6331994_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
WTC11_00021575	chr12	-	543	4	NNC	ENSG00000111639.8	novel	601	3	NA	NA	45	70090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1344.44569329602	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGGTGTAGTGGCAGG	-6490568	True	NA	NA	False	NA	NA	NA	6493795	6421795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492150_6492468_6492861_6492973_6493716
WTC11_00021576	chr12	-	847	4	NNC	ENSG00000111639.8	novel	814	3	NA	NA	0	70090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1294.46926061095	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGGTGTAGTGGCAGG	-6490613	True	NA	NA	False	NA	NA	NA	6493840	6421795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492149_6492468_6492861_6492973_6493458
WTC11_00021577	chr12	-	1759	6	FSM	ENSG00000215039.8	ENST00000659820.1	1759	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	16.2677595261302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTACCCCATCAATAAA	-6450728	False	NA	12	True	NA	NA	NA	6451118	6439209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6439677_6443542_6443718_6446960_6447088_6448036_6448151_6448639_6448738_6450340
WTC11_00021578	chr12	-	1672	7	FSM	ENSG00000215039.8	ENST00000655473.1	1672	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.996295838936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTACCCCATCAATAAA	-6451129	True	NA	12	True	NA	NA	NA	6451519	6439209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6439677_6443542_6443718_6446960_6447088_6448036_6448151_6448639_6448738_6450340_6450981_6451468
WTC11_00021579	chr12	-	1123	6	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	11	-5	multi-exon	FALSE	canonical	3	14	junction_2	13.5292276202302	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGAGGTGCTATTGTT	-6469880	True	NA	NA	False	ATTAAA	-23	NA	6470666	6447620	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_6448151_6448639_6448758_6464889_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00021580	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.8148877222268	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469867	True	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00021581	chr12	-	2736	5	FSM	ENSG00000139190.17	ENST00000396308.4	2736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.017180121086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6464487_6464889_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00021584	chr12	-	2932	8	NIC	ENSG00000010295.20	novel	2680	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_7	14.5644240867805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6555527	True	NA	-12	True	AATGAA	-12	NA	6556070	6539538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
WTC11_00021585	chr12	-	2703	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	111.47368398964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	-6558490	True	NA	-4	True	AATACA	-15	NA	6568278	6556872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
WTC11_00021586	chr12	-	2624	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-1	-2	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	102.985306395298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	-6558491	True	NA	-4	True	AATACA	-15	NA	6568279	6556872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
WTC11_00021588	chr12	-	6473	40	NIC	ENSG00000111642.16	novel	6673	40	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_7	229.427177372889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	-6596279	True	NA	-7	True	AATAAA	-18	NA	6607376	6570081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581037_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
WTC11_00021589	chr12	-	6464	40	NIC	ENSG00000111642.16	novel	6673	40	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_15	231.914604882751	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	-6596279	True	NA	-7	True	AATAAA	-18	NA	6607376	6570081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583376_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
WTC11_00021590	chr12	-	6553	40	FSM	ENSG00000111642.16	ENST00000642810.1	6630	40	77	0	-53	0	multi-exon	FALSE	canonical	1	1	junction_14	237.29014466422	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGCTCTGGTTCAG	-6607492	False	NA	-13	True	AATAAA	-12	NA	6607505	6570087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583195_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
WTC11_00021592	chr12	-	1346	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	-35	-258	0	258	multi-exon	FALSE	canonical	2	6	junction_1	3.89711431702997	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATGCTAAGCATGCTGA	-6647264	True	NA	NA	False	NA	NA	NA	6647428	6643796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
WTC11_00021593	chr12	-	1245	8	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	57.4775910193508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-6659833	True	NA	-24	True	AATAAA	-15	NA	6663101	6650590	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
WTC11_00021597	chr12	-	3772	10	ISM	ENSG00000126746.18	ENST00000361959.7	2978	11	330	-253	-66	0	3prime_fragment	FALSE	canonical	3	81	junction_4	74.3247794447193	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6686367	True	NA	-2	True	AATAAA	-15	NA	6688962	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
WTC11_00021598	chr12	-	3297	10	NNC	ENSG00000126746.18	novel	3266	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	75.9868409660515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6686301	True	NA	-2	True	AATAAA	-15	NA	6688896	6666476	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688452
WTC11_00021600	chr12	-	3336	9	ISM	ENSG00000126746.18	ENST00000319770.7	3266	10	548	253	-66	0	3prime_fragment	FALSE	canonical	3	197	junction_5	29.508473359359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTTTGTTTATTTT	-6686367	True	NA	-5	True	TATAAA	-26	NA	6688962	6666729	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
WTC11_00021601	chr12	-	1365	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	62	1605	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	25.7371327074327	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCACCTGTTCCCTCT	-6700355	False	NA	-7	True	AATAAA	-27	NA	6700368	6692185	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
WTC11_00021602	chr12	-	1559	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6717875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717903_6747994_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00021604	chr12	-	2760	5	FSM	ENSG00000111665.12	ENST00000422785.7	2760	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	162.97852619287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTGTGTGTGTAT	-6843974	True	NA	-6	True	AAGAAA	-19	NA	6851269	6844792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846904_6849564_6849859_6850466_6850597_6850832_6851010_6851221
WTC11_00021605	chr12	-	2240	6	NIC	ENSG00000111665.12	novel	2760	5	NA	NA	0	-90	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	177.457149757343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTGTCAATGTTGAGT	-6843967	True	NA	NA	False	AATATA	-15	NA	6851262	6844948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6846368_6846724_6846904_6849564_6849859_6850466_6850597_6850832_6851010_6851221
WTC11_00021606	chr12	-	1094	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	-48	51	-48	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAAGCCCGGAGACCTG	-6944474	True	NA	97	True	NA	NA	NA	6944652	6943558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6943600_6944700
WTC11_00021607	chr12	-	1305	9	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	543.120713446836	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCAAGGCTTCACGTGT	-6940451	True	NA	-6	True	AATAAA	-18	NA	6970618	6965354	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00021608	chr12	-	1325	9	NNC	ENSG00000215021.10	novel	1735	9	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	674.540955020524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCAAGGCTTCACGTGT	-6940477	True	NA	-6	True	AATAAA	-18	NA	6970644	6965354	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6965713_6966423_6966501_6967170_6967247_6967673_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00021609	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	669.670243011439	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970700	False	NA	-3	True	AATAAA	-21	NA	6970716	6965351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00021611	chr12	-	1412	8	FSM	ENSG00000111684.11	ENST00000536797.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	231.474598597596	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATCCAATCCTCAGGGT	-7008807	True	NA	NA	False	GGGGCT	-23	NA	7018474	6977839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6978508_6978602_6978690_6979470_6979580_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
WTC11_00021612	chr12	-	527	2	FSM	ENSG00000111684.11	ENST00000538987.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCCTTTCCAGCATCA	-6981145	False	NA	NA	False	NA	NA	NA	6981157	6979594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6979968_6981003
WTC11_00021613	chr12	-	3667	11	NIC	ENSG00000173262.12	novel	3462	11	NA	NA	-86	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	234.58527234249	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACATCACAAGCACATT	NA	False	NA	-10	True	AATAAA	-14	NA	7873337	7812518	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7869862_7869938_7873018
WTC11_00021614	chr12	-	2896	9	ISM	ENSG00000173262.12	ENST00000616981.4	3366	10	30641	383	2	-382	3prime_fragment	FALSE	canonical	3	32	junction_1	256.544069070014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGACTTATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	7832814	7812895	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721
WTC11_00021615	chr12	-	2903	10	NIC	ENSG00000173262.12	novel	1732	10	NA	NA	3	-382	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	249.002652571522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGACTTATTTTCTC	-7872937	True	NA	NA	False	NA	NA	NA	7873111	7812895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7832721_7832815_7869862_7869938_7873018
WTC11_00021616	chr12	-	1134	5	ISM	ENSG00000173262.12	ENST00000542546.5	3120	8	5134	1487	5083	20	3prime_fragment	FALSE	canonical	3	32	junction_1	338.554556164882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGATATAGGAGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	7827682	7813999	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494
WTC11_00021617	chr12	-	3841	11	NNC	ENSG00000059804.16	novel	3827	10	NA	NA	0	33080	intron_retention	FALSE	non_canonical	0	0	junction_1	940.899760867224	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGGCGTGGTGGTACA	-7899749	True	NA	NA	False	AAAAAG	-2	NA	7936167	7886149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_7886183_7919228_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
WTC11_00021618	chr12	-	302	1	FSM	ENSG00000255356.2	ENST00000533382.2	349	1	51	-4	51	4	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATATTACTCAGTTTC	-7896849	False	NA	NA	False	NA	NA	NA	7896905	7896603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7896600_7896900
WTC11_00021620	chr12	-	801	1	FSM	ENSG00000255581.1	ENST00000388966.4	660	1	1	-142	1	142	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTACTGGTTTCAGT	-8017836	False	NA	NA	False	AAGAAA	-33	NA	8017859	8017058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8017100_8017900
WTC11_00021621	chr12	-	1033	2	Antisense	novelGene_ENSG00000065970.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	0	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTCCTTGTTTCAGC	-8033055	True	NA	-1	True	AATAAA	-16	NA	8033465	8032131	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_8033035_8033335
WTC11_00021622	chr12	-	581	2	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	42	-6153	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	-8395884	True	NA	NA	False	NA	NA	NA	8396761	8390269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_8390512_8396422
WTC11_00021623	chr12	-	592	1	FSM	ENSG00000284673.1	ENST00000642101.1	219	1	-113	-260	-113	260	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCGCATTCGGAGCTTG	-8395877	True	NA	NA	False	NA	NA	NA	8396754	8396162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8396200_8396800
WTC11_00021624	chr12	-	1440	7	NNC	ENSG00000256673.1	novel	400	4	NA	NA	11594	1298	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	9.29904415637555	2308	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGACTTTTTTTTCTT	-9403076	False	NA	0	True	ATTAAA	-21	NA	9403257	9397056	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9397215_9397614_9397690_9398381_9398485_9399794_9399864_9400235_9400327_9401746_9401860_9402426
WTC11_00021625	chr12	-	3290	27	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	12	323	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	72.3407964319053	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGCATCCACTGTG	-9444016	True	NA	NA	False	NA	NA	NA	9448217	9418349	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418700_9418774_9418930_9419111_9419186_9419488_9419574_9419980_9420082_9420172_9420256_9420514_9420665_9421387_9421492_9421817_9421891_9424527_9424641_9425470_9425603_9425715_9425825_9426081_9426121_9427632_9427701_9427820_9427866_9429131_9429212_9429559_9429607_9430587_9430741_9432365_9432575_9432968_9433057_9433307_9433416_9434094_9434141_9436946_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447981
WTC11_00021626	chr12	-	4019	26	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	11	323	intron_retention	FALSE	canonical	3	39	junction_5	68.9615081041591	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGCATCCACTGTG	-9444017	True	NA	NA	False	NA	NA	NA	9448218	9418349	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418700_9418774_9418930_9419111_9419191_9419488_9419574_9419980_9420082_9420172_9420256_9420514_9421492_9421817_9421891_9424527_9424641_9425470_9425603_9425715_9425825_9426081_9426121_9427632_9427701_9427820_9427866_9429131_9429212_9429559_9429607_9430587_9430741_9432365_9432575_9432968_9433057_9433307_9433416_9434094_9434141_9436946_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447981
WTC11_00021627	chr12	-	2531	2	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21321	-8	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTGAAGGAGTTAATT	-9910696	True	NA	-23	True	AATAAA	-10	NA	9911026	9898680	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9900876_9910690
WTC11_00021628	chr12	-	442	2	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21452	-45	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATAAATTTTGATAATGT	-9910565	False	NA	-60	True	NA	NA	NA	9910895	9898717	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9898977_9910712
WTC11_00021629	chr12	-	6041	8	NNC	ENSG00000256667.6	novel	2353	7	NA	NA	-3666	5	at_least_one_novel_splicesite	FALSE	non_canonical	3	37	junction_1	18.2107839771171	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTGGACAGGTTTTAA	-10603321	False	NA	1	True	AATAAA	-28	NA	10603335	10588057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10589056_10589142_10589546_10592279_10592387_10593780_10594006_10595690_10595928_10596891_10596982_10598042_10598210_10599521
WTC11_00021630	chr12	-	6278	6	NIC	ENSG00000256667.6	novel	2353	7	NA	NA	-3909	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	33.724768346128	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTGTGGACAGGTTT	-10597527	False	NA	-2	True	AATAAA	-25	NA	10603578	10588060	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10589546_10592279_10592387_10593780_10594006_10595690_10595928_10598042_10598210_10599521
WTC11_00021634	chr12	-	1733	11	NIC	ENSG00000060138.13	novel	1931	10	NA	NA	-96	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1543.74357002709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAAGCTGAGAACCT	-10723338	True	NA	-102	True	AAAAAG	-18	NA	10723419	10699479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10699655_10701253_10701354_10701959_10702135_10703522_10703620_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00021635	chr12	-	563	4	FSM	ENSG00000111215.12	ENST00000228811.8	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.0369800568452	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	10849475	10845848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10845951_10847044_10847368_10848371_10848408_10849373
WTC11_00021636	chr12	-	1645	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	17	0	-15	multi-exon	FALSE	canonical	1	3	junction_1	34.5714839137692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGTTAAAAACTATCAAA	NA	False	NA	NA	False	AATAAA	-3	NA	11171573	10937424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
WTC11_00021637	chr12	-	422	1	FSM	ENSG00000212126.3	ENST00000506868.1	1000	1	174	404	174	-404	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGCTTCATACCCTTT	NA	False	NA	NA	False	AATACA	-32	NA	10986738	10986316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10986300_10986700
WTC11_00021639	chr12	-	804	4	Fusion	ENSG00000255837.2_ENSG00000231887.8	novel	534	3	NA	NA	13	-8	multi-exon	FALSE	canonical	2	5	junction_1	36.8057966449127	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATATATCTAGTGTAC	NA	False	NA	NA	False	AATAAA	-11	NA	11171595	10995968	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_10996326_11034781_11034886_11047019_11047189_11171421
WTC11_00021641	chr12	-	1158	3	Fusion	ENSG00000212124.2_ENSG00000231887.8	novel	534	3	NA	NA	11	737	multi-exon	FALSE	canonical	3	9	junction_1	38	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGATGTCAAGTATTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	11171597	11020881	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_11021695_11047019_11047189_11171421
WTC11_00021642	chr12	-	394	1	FSM	ENSG00000256981.1	ENST00000535136.1	910	1	183	333	183	-333	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTATATCCTTAGT	NA	False	NA	NA	False	NA	NA	NA	11159511	11159117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11159100_11159500
WTC11_00021643	chr12	-	405	2	FSM	ENSG00000197870.13	ENST00000539835.1	476	2	71	0	71	0	multi-exon	FALSE	canonical	1	5	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCCGGGAAAGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	11268668	11267779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11268149_11268632
WTC11_00021644	chr12	-	8568	15	ISM	ENSG00000070018.9	ENST00000261349.9	10252	23	102096	-1	-29720	1	3prime_fragment	FALSE	canonical	3	88	junction_13	24.8587848390357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCCTTTCTTTTCAG	-12164930	False	NA	NA	False	AATAAA	-19	NA	12164948	12116023	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
WTC11_00021645	chr12	-	8491	25	NIC	ENSG00000070018.9	novel	7812	24	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.7001157405531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTGTCCTTTCTTTTC	-12260829	True	NA	NA	False	AATAAA	-17	NA	12267005	12116025	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_12119331_12120369_12120404_12121085_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
WTC11_00021646	chr12	-	9807	22	NIC	ENSG00000070018.9	novel	10252	23	NA	NA	17	-2	intron_retention	FALSE	canonical	1	3	junction_21	32.829871360009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTGTCCTTTCTTTT	-12260819	True	NA	NA	False	AATAAA	-16	NA	12266995	12116026	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12266680
WTC11_00021647	chr12	-	1466	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	75	2	75	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTCTGTCGCATCAACT	-12356934	True	NA	-1	True	AATAAA	-18	NA	12356992	12355404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12356806_12356927
WTC11_00021648	chr12	-	1910	4	FSM	ENSG00000183150.8	ENST00000651487.1	1910	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	53.7649204097492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTGATTAATGATTCAA	-12695916	True	NA	NA	False	CATAAA	-18	NA	12696183	12660889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
WTC11_00021649	chr12	-	3815	27	FSM	ENSG00000070019.5	ENST00000261170.5	3858	27	33	10	9	-10	multi-exon	FALSE	canonical	2	4	junction_11	8.34367208759581	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAAAACTGTGTATGC	-14696551	False	NA	-6	True	AATAAA	-10	NA	14696566	14612641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14613292_14614866_14614944_14616632_14616728_14619210_14619310_14621041_14621217_14622004_14622198_14625756_14625916_14628645_14628738_14639861_14639951_14641081_14641220_14643573_14643707_14645228_14645316_14651406_14651512_14651958_14652031_14652951_14653015_14656511_14656618_14660980_14661063_14669721_14669834_14672872_14672959_14674624_14674761_14676853_14676972_14679656_14679754_14681355_14681478_14683041_14683258_14686160_14686226_14687950_14688064_14696231
WTC11_00021650	chr12	-	3136	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	212	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	-14710212	False	NA	0	True	AATAAA	-25	NA	14710255	14705453	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14708345_14710010
WTC11_00021651	chr12	-	856	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	62	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14710079	False	NA	-3	True	AATAAA	-22	NA	14710122	14705456	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14705913_14708056_14708345_14710010
WTC11_00021652	chr12	-	727	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	17	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14710079	False	NA	-3	True	AATAAA	-22	NA	14710122	14705456	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14705913_14708056_14708216_14710010
WTC11_00021653	chr12	-	584	2	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAAAAATTACTTTCTC	-14774003	False	NA	NA	False	AAAAAG	-22	NA	14774164	14773462	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_14773881_14773998
WTC11_00021655	chr12	-	5005	4	ISM	ENSG00000048540.16	ENST00000541764.5	1489	7	6718	-2666	1908	228	3prime_fragment	FALSE	canonical	2	11	junction_3	65.8634952003004	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCAATTGCTGGGTGTA	-16600264	False	NA	NA	False	AATAAA	-16	NA	16600288	16548143	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_16551328_16560412_16560539_16594136_16594335_16598791
WTC11_00021658	chr12	-	3338	5	NIC	ENSG00000048540.16	novel	3515	5	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	57.6340827982887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	-16607014	False	NA	-11	True	AATAAA	-20	NA	16607073	16548423	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065_16606133_16607046
WTC11_00021659	chr12	-	2028	15	NIC	ENSG00000084453.17	novel	7682	16	NA	NA	1	-258	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	6.38916493537525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAATCATCTTAATTC	-21394952	True	NA	NA	False	NA	NA	NA	21395396	21269716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21269768_21274468_21274587_21275359_21275425_21292163_21292337_21293944_21294111_21295596_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21334587_21334705_21395269
WTC11_00021662	chr12	-	2260	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	14	0	-14	multi-exon	FALSE	canonical	2	8	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTCTTTGTACTCACT	-21774657	False	NA	NA	False	ATTAAA	-1	NA	21774706	21764968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21766624_21773242_21773687_21774545
WTC11_00021663	chr12	-	9515	5	FSM	ENSG00000111728.11	ENST00000396037.9	9707	5	0	192	0	-192	multi-exon	FALSE	canonical	2	3	junction_4	2.1650635094611	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCTTTCCACCGAA	-22334689	True	NA	NA	False	NA	NA	NA	22334707	22193582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22202039_22249005_22249099_22255279_22255390_22287148_22287294_22333996
WTC11_00021664	chr12	-	9523	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	-48	-4781	44	2	multi-exon	FALSE	canonical	3	62	junction_10	245.094287979137	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGTTTGTATCCCA	-24902308	False	NA	-5	True	AATAAA	-18	NA	24902344	24810021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
WTC11_00021665	chr12	-	545	1	FSM	ENSG00000278743.1	ENST00000622671.1	572	1	-46	73	-46	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGATCTTGGCGTTCA	NA	False	NA	-24	True	AATAAA	-16	NA	25386287	25385742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25385700_25386300
WTC11_00021667	chr12	-	3972	6	FSM	ENSG00000246695.9	ENST00000660703.1	3972	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.6552656724623	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCCATCTCTACTAAAAAT	-25958324	False	NA	NA	False	NA	NA	NA	25958360	25945340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25946136_25947518_25947623_25952757_25955242_25956226_25956348_25956638_25956765_25958018
WTC11_00021668	chr12	-	4166	6	Fusion	ENSG00000123095.6_ENSG00000256894.1	novel	3743	5	NA	NA	290	-241	multi-exon	FALSE	canonical	1	1	junction_5	9.45727233402951	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATATACGATATGATAT	-26125769	False	NA	NA	False	AATAAA	-4	NA	26125794	26120270	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_26123169_26123629_26123742_26124071_26124180_26124518_26124583_26124717_26125413_26125505
WTC11_00021669	chr12	-	1347	9	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_8	239.79597447622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACTCTTAAATCCAAA	-27008327	True	NA	NA	False	NA	NA	NA	27014373	26975495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014077
WTC11_00021673	chr12	-	5227	26	NNC	ENSG00000133704.10	novel	5208	25	NA	NA	0	17601	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.4676891495281	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATCTATAATTTTCTTA	-30690046	True	NA	NA	False	NA	NA	NA	30695869	30611386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_30611407_30628988_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
WTC11_00021674	chr12	-	2742	11	NIC	ENSG00000110888.18	novel	3507	16	NA	NA	-252	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	77.0867044307901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	-30731678	False	NA	-5	True	AATAAA	-14	NA	30731700	30709552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30716507_30716677_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342
WTC11_00021675	chr12	-	3625	18	NIC	ENSG00000110888.18	novel	3606	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	56.1913438887849	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	-30750131	True	NA	-5	True	AATAAA	-14	NA	30754859	30709552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754680
WTC11_00021676	chr12	-	3652	19	NNC	ENSG00000110888.18	novel	3619	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	61.5911449463514	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	-30750211	True	NA	-5	True	AATAAA	-14	NA	30754939	30709552	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_30710468_30711565_30711630_30713784_30713886_30714958_30715082_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
WTC11_00021677	chr12	-	6137	16	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_12	30.6912944587803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGTGTTCCTATTTA	-30750160	True	NA	-6	True	AATAAA	-13	NA	30754888	30709553	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343
WTC11_00021678	chr12	-	5559	13	NIC	ENSG00000110888.18	novel	3404	17	NA	NA	-701	-4	intron_retention	FALSE	canonical	3	30	junction_4	48.4586736875408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTTCAGTGTTCCTA	-30752346	False	NA	-10	True	AATAAA	-9	NA	30752356	30709557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070
WTC11_00021679	chr12	-	3361	18	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_17	60.1414710477919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTTCAGTGTTCCTA	-30750138	True	NA	-10	True	AATAAA	-9	NA	30754866	30709557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715082_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30754750
WTC11_00021680	chr12	-	3756	19	NIC	ENSG00000110888.18	novel	3619	19	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	58.3192575610247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACCTTCAGTGTTCCT	-30750211	True	NA	-11	True	AATAAA	-8	NA	30754939	30709558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
WTC11_00021682	chr12	-	475	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	-30752573	False	NA	NA	False	NA	NA	NA	30752583	30752108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_30752100_30752600
WTC11_00021683	chr12	-	3209	2	FSM	ENSG00000245614.5	ENST00000669174.1	3188	2	0	-21	0	21	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGACCTGTGTCTGGC	-31073287	True	NA	NA	False	TATAAA	-13	NA	31073786	31019412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31022030_31073194
WTC11_00021684	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	-31073634	False	NA	0	True	AATAAA	-23	NA	31073847	31020762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31022030_31060659_31060771_31073194
WTC11_00021685	chr12	-	613	5	ISM	ENSG00000177359.21	ENST00000688317.1	781	7	2627	-93	1011	87	3prime_fragment	FALSE	canonical	3	52	junction_1	10.6389614154766	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGGCTGTCAAC	-31116392	False	NA	89	True	NA	NA	NA	31116460	31111563	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356
WTC11_00021686	chr12	-	1296	7	FSM	ENSG00000177359.21	ENST00000542925.6	749	7	-457	-90	-455	87	multi-exon	TRUE	canonical	3	27	junction_6	21.5998971190965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGGCTGTCAAC	NA	False	NA	89	True	NA	NA	NA	31119571	31111563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118962
WTC11_00021687	chr12	-	933	7	NNC	ENSG00000177359.21	novel	749	7	NA	NA	-2268	87	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	25.0516133878306	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGGCTGTCAAC	NA	False	NA	89	True	NA	NA	NA	31121384	31111563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31121138
WTC11_00021689	chr12	-	713	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	26	11	-3	-3	multi-exon	FALSE	canonical	2	20	junction_6	23.7726500182224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCTGAGTCTATGACT	NA	False	NA	-9	True	ATTAAA	-11	NA	31119090	31111661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
WTC11_00021692	chr12	-	9506	21	FSM	ENSG00000170456.16	ENST00000389082.10	9506	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	19.6780969608344	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGCTTCATTGTT	-31590313	True	NA	-5	True	AATAAA	-16	NA	31591136	31382225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31387787_31389323_31389499_31392266_31392394_31392613_31392697_31398174_31398363_31399653_31399773_31402497_31402644_31409262_31409385_31413435_31413565_31415366_31415449_31423596_31423676_31424534_31424688_31426292_31426425_31433154_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
WTC11_00021695	chr12	-	800	1	FSM	ENSG00000276058.1	ENST00000617809.1	440	1	30	-390	30	390	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTACTGGACTTGAATGG	NA	False	NA	NA	False	NA	NA	NA	31715751	31714951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31715000_31715800
WTC11_00021696	chr12	-	731	1	FSM	ENSG00000275854.1	ENST00000620106.1	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTAATCTTTTTTTTT	-32737646	False	NA	3	True	AATAAA	-22	NA	32737660	32736929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32736900_32737700
WTC11_00021697	chr12	-	1386	1	FSM	ENSG00000274976.1	ENST00000617667.1	426	1	-962	2	-962	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTCTTACCTTAGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	32821529	32820143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32820100_32821500
WTC11_00021698	chr12	-	6431	34	NIC	ENSG00000139116.19	novel	6371	38	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	18.7164330696402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTGTATTGTTCTTT	-39443285	True	NA	-2	True	AATAAA	-19	NA	39443399	39293227	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330241_39330263_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
WTC11_00021699	chr12	-	1639	6	FSM	ENSG00000139168.9	ENST00000679184.1	1639	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	218.481486629874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAATATTATTATTGTC	-42321232	True	NA	NA	False	AGTAAA	-27	NA	42326101	42312146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42325923
WTC11_00021700	chr12	-	1685	7	FSM	ENSG00000139168.9	ENST00000676501.1	1661	7	0	-24	0	0	multi-exon	FALSE	canonical	1	3	junction_6	207.130930143767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAATATTATTATTGTC	-42321249	True	NA	NA	False	AGTAAA	-27	NA	42326118	42312146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42325923
WTC11_00021702	chr12	-	5715	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	56	-10	-47	4	multi-exon	FALSE	canonical	2	6	junction_7	19.0102013430169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATTCTCACATTACTAC	-42484360	False	NA	1	True	AATAAA	-20	NA	42484388	42456752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
WTC11_00021703	chr12	-	4277	9	FSM	ENSG00000139174.12	ENST00000455697.6	4277	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	19.0394327646598	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	-42484313	False	NA	-49	True	AATAAA	-3	NA	42484341	42458371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757_42483986_42484273
WTC11_00021709	chr12	-	4724	15	NIC	ENSG00000139218.18	novel	7552	15	NA	NA	-62	-15	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	82.7467552850508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGATAAACTAATGTCT	-45990515	False	NA	NA	False	AATAAA	-35	NA	45990646	45919145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_45919310_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
WTC11_00021710	chr12	-	1929	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_1	140.98778512891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAGGCACGGTGATACA	-45985357	True	NA	NA	False	AAAAAG	-23	NA	45990584	45954735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
WTC11_00021714	chr12	-	5597	28	FSM	ENSG00000079337.16	ENST00000405493.6	5751	28	0	154	0	-154	multi-exon	FALSE	canonical	2	3	junction_27	7.01282384041801	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCACTCAGCACTGAGT	-47758329	False	132	NA	False	NA	NA	NA	47758461	47734825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758371
WTC11_00021715	chr12	-	5837	28	FSM	ENSG00000079337.16	ENST00000449771.7	6300	28	0	463	0	-154	multi-exon	FALSE	canonical	2	5	junction_10	6.59176024708172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCACTCAGCACTGAGT	-47758748	False	NA	NA	False	NA	NA	NA	47758880	47734825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
WTC11_00021716	chr12	-	4850	53	FSM	ENSG00000139219.19	ENST00000337299.7	4442	53	30	-438	0	-2	multi-exon	FALSE	canonical	1	2	junction_52	14.7514290752901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTGACTTGTGGTTT	-48003268	True	NA	-3	True	ATTAAA	-22	NA	48004476	47972968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_48004236
WTC11_00021718	chr12	-	5814	17	ISM	ENSG00000079387.14	ENST00000448372.5	4679	18	3372	-567	-964	490	3prime_fragment	FALSE	canonical	3	113	junction_8	12.9083306434256	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATTACTGCCTGGTTT	-48102304	False	NA	NA	False	NA	NA	NA	48102436	48042406	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468
WTC11_00021719	chr12	-	4563	17	NIC	ENSG00000079387.14	novel	4967	19	NA	NA	12	-137	combination_of_known_splicesites	FALSE	canonical	3	7	junction_16	32.5628598828481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCCAAATACAGACTTAC	-48105690	False	NA	82	True	NA	NA	NA	48105822	48043110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48105401
WTC11_00021722	chr12	-	2359	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	14	0	-14	multi-exon	TRUE	canonical	0	0	junction_5	77.0648276084556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAGTTCCAAATATCTT	-48678560	True	NA	51	True	ATTAAA	-3	NA	48682238	48653224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
WTC11_00021724	chr12	-	2555	9	FSM	ENSG00000139620.13	ENST00000550347.5	2714	9	160	-1	93	0	multi-exon	FALSE	canonical	0	0	junction_5	81.6333265278342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTTTGAGAATATAG	-48682055	False	NA	1	True	AAGAAA	-41	NA	48682065	48653400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381
WTC11_00021726	chr12	-	943	5	FSM	ENSG00000139620.13	ENST00000548701.5	922	5	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.9698740507662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTAATATCGGTTATCT	-48662575	False	NA	NA	False	NA	NA	NA	48662592	48653688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559
WTC11_00021730	chr12	-	5804	21	FSM	ENSG00000174233.12	ENST00000307885.4	6464	21	660	0	660	0	multi-exon	FALSE	canonical	3	16	junction_18	8.82198957151957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGAGGTGGGAGGCCG	-48783414	False	NA	NA	False	NA	NA	NA	48783469	48766328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48768717_48768936_48769062_48770765_48770971_48771709_48771974_48772294_48772425_48772507_48772544_48773468_48773648_48773939_48774099_48774401_48774519_48774690_48774779_48774956_48775055_48775302_48775451_48775672_48775699_48775962_48776092_48776208_48776351_48776427_48776587_48777103_48777232_48777409_48777522_48777614_48777737_48778107_48778258_48782570
WTC11_00021731	chr12	-	351	2	FSM	ENSG00000174243.10	ENST00000553065.1	336	2	0	-15	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTGGTGTACATTGG	-48833529	False	NA	NA	False	NA	NA	NA	48833561	48832507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48832574_48833276
WTC11_00021733	chr12	-	396	1	FSM	ENSG00000239617.1	ENST00000489971.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGCTCATGTGTATGT	NA	False	NA	NA	False	AAGAAA	-6	NA	48903813	48903417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48903400_48903800
WTC11_00021735	chr12	-	1532	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	-1	0	1	multi-exon	FALSE	canonical	2	17	junction_9	104.723254342099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATATTGCAGTGTTTGATT	-49015366	True	NA	-5	True	ATTAAA	-18	NA	49018764	49002276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
WTC11_00021736	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	103.774549022356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-49015389	True	NA	-2	True	NA	NA	NA	49018787	49002311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
WTC11_00021737	chr12	-	888	6	FSM	ENSG00000167548.18	ENST00000681974.1	1344	6	456	0	-238	0	multi-exon	FALSE	canonical	3	15	junction_2	3.72021504754765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGGGGGAAGAGAGGT	-49024935	False	NA	NA	False	NA	NA	NA	49024946	49021721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49021873_49022042_49022152_49022279_49022354_49022589_49022876_49024577_49024709_49024809
WTC11_00021742	chr12	-	1952	2	FSM	ENSG00000186897.5	ENST00000334221.5	2073	2	62	59	62	-59	multi-exon	FALSE	canonical	2	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGGCCCTGGGGCTAC	-49337074	False	NA	NA	False	TTTAAA	-35	NA	49337126	49332467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49333234_49335940
WTC11_00021748	chr12	-	930	9	FSM	ENSG00000161800.13	ENST00000552310.5	932	9	0	2	0	-2	multi-exon	FALSE	canonical	3	9	junction_8	86.2188349492151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCTGTGATTGTTGTT	-50017601	True	NA	NA	False	NA	NA	NA	50025448	49999140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016716_50025397
WTC11_00021749	chr12	-	1891	9	NIC	ENSG00000139624.14	novel	2998	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	154.049454315814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	-50162009	True	NA	-5	True	ATTAAA	-15	NA	50167320	50129797	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50143073_50143205_50143951_50144058_50167100
WTC11_00021750	chr12	-	4458	9	ISM	ENSG00000139624.14	ENST00000547787.5	2132	11	20457	59	-2347	0	intron_retention	FALSE	canonical	3	428	junction_7	30.1576586458564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGCTGTTCACGGTCT	NA	False	NA	-65	True	NA	NA	NA	50146846	50129857	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951
WTC11_00021753	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	83.0405745658197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	-51022634	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
WTC11_00021756	chr12	-	4109	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-30	4985	0	-1	5prime_fragment	FALSE	canonical	1	86	junction_8	57.8594465541761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTTCCTGGGTATT	-51022634	True	NA	-2	True	ATTAAA	-18	NA	51026368	50985993	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
WTC11_00021758	chr12	-	4616	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	-1	1	intron_retention	FALSE	canonical	1	3	junction_4	29.2318319644869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTACTCTTTGTCTC	-51082401	True	NA	1	True	ATTAAA	-18	NA	51083584	51061203	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
WTC11_00021760	chr12	-	3692	15	NIC	ENSG00000135457.11	novel	3807	15	NA	NA	8	49	intron_retention	FALSE	canonical	3	54	junction_1	60.9554872720367	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTCTTGGTTTGAAA	-51170657	True	NA	-7	True	ATTAAA	-20	NA	51173126	51093758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
WTC11_00021764	chr12	-	2779	1	FSM	ENSG00000278126.1	ENST00000620274.1	898	1	-1787	-94	-1787	94	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCACATGTTCAGACT	NA	False	NA	88	True	NA	NA	NA	51204368	51201589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51201600_51204400
WTC11_00021766	chr12	-	1563	3	FSM	ENSG00000170545.17	ENST00000603864.5	1518	3	-45	0	-36	0	multi-exon	FALSE	canonical	3	95	junction_2	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATTCAAATTAAAAAT	-51269974	False	556	-60	True	NA	NA	NA	51269994	51245387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51269244
WTC11_00021772	chr12	-	2862	6	FSM	ENSG00000170421.13	ENST00000546583.5	2862	6	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_5	93.077602031853	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTAGCTCTGCCAATGT	-52887816	True	NA	-25	True	AATAAA	-4	NA	52905052	52897207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52902073_52904657
WTC11_00021773	chr12	-	1723	9	NIC	ENSG00000170421.13	novel	1755	9	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	985.148941784947	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCTTGCCCATGC	-52948464	False	NA	-98	True	NA	NA	NA	52949740	52897280	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905080_52949714
WTC11_00021775	chr12	-	3218	10	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	261	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	122.773504199128	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53231906	False	NA	-3	True	AATAAA	-15	NA	53231927	53210568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231390
WTC11_00021778	chr12	-	2115	15	FSM	ENSG00000094914.14	ENST00000672797.1	2101	15	0	-14	0	0	multi-exon	FALSE	canonical	2	21	junction_6	116.370822663359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCCACCTCTAAGAATA	-53321257	False	NA	-51	True	NA	NA	NA	53321268	53307503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308852_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564
WTC11_00021780	chr12	-	6903	12	ISM	ENSG00000139625.13	ENST00000547035.5	2944	14	2575	60	1779	0	intron_retention	FALSE	canonical	3	65	junction_11	12.9212490760743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACTCGTATTCCTTGT	-53491254	False	NA	-67	True	NA	NA	NA	53491291	53481181	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438
WTC11_00021783	chr12	-	1612	13	FSM	ENSG00000267281.3	ENST00000591834.1	1609	13	0	-3	0	3	multi-exon	FALSE	canonical	1	2	junction_2	47.5365356565055	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-53625962	False	2630	-2	True	AATAAA	-18	NA	53625979	53506687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53506894_53507020_53507143_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53625950
WTC11_00021787	chr12	-	241	2	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTCTTTGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-22	NA	53642843	53641554	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_53641705_53642752
WTC11_00021791	chr12	-	822	3	FSM	ENSG00000250654.7	ENST00000505259.2	821	3	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	2.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGCTTTATGTACATGTG	-54081707	True	NA	NA	False	AATATA	-18	NA	54081823	54078921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54079441_54080226_54080345_54081638
WTC11_00021792	chr12	-	1680	4	ISM	ENSG00000123415.16	ENST00000514685.5	926	5	61	0	-8	0	intron_retention	FALSE	canonical	3	116	junction_3	51.4090350900393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187165	False	NA	-16	True	AATAAA	-34	NA	54188879	54181452	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818
WTC11_00021793	chr12	-	1262	7	NNC	ENSG00000123415.16	novel	2119	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	92.9527956665222	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187231	True	NA	-16	True	AATAAA	-34	NA	54188945	54181452	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187045_54187296_54187818_54187906_54188510_54188597_54188725
WTC11_00021794	chr12	-	2026	3	FSM	ENSG00000123415.16	ENST00000505662.1	1422	3	-604	0	97	0	multi-exon	FALSE	canonical	1	9	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTATGCCTCAGGCTCC	-54186796	False	NA	-48	True	AATAAA	-2	NA	54188510	54181484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183764_54183960_54187818
WTC11_00021797	chr12	-	3292	2	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	18321	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54234178	False	NA	NA	False	AAAAAG	-2	NA	54234204	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224208_54230941
WTC11_00021798	chr12	-	1443	5	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	48	-369	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_2	169.687028084058	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGATTTGTAGCTATAGT	-54239670	True	NA	-5	True	GATAAA	-20	NA	54280074	54240993	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54241906_54246114_54246213_54252040_54252228_54257513_54257693_54280007
WTC11_00021804	chr12	-	4639	28	NNC	ENSG00000139613.12	novel	5090	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_11	77.3457844382638	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	-56183980	True	NA	1	True	TATAAA	-21	NA	56189473	56162358	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172702_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
WTC11_00021812	chr12	-	984	3	FSM	ENSG00000257727.6	ENST00000546937.5	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	99.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGTCTTTTCATGCC	-56311754	False	NA	-3	True	NA	NA	NA	56311929	56310427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56310596_56310957_56311055_56311210
WTC11_00021813	chr12	-	2647	13	FSM	ENSG00000135473.16	ENST00000547226.5	2642	13	0	-5	0	0	multi-exon	FALSE	canonical	3	101	junction_12	17.5647611237197	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	-56322913	False	NA	-6	True	AATAAA	-29	NA	56324187	56316935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048
WTC11_00021818	chr12	-	3288	11	FSM	ENSG00000170581.14	ENST00000556539.5	3278	11	0	-10	0	10	multi-exon	FALSE	canonical	3	60	junction_8	14.9679657936541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTCTTTATTTCCCT	NA	False	NA	6	True	AATAAA	-30	NA	56349775	56341586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588
WTC11_00021821	chr12	-	859	3	FSM	ENSG00000135423.13	ENST00000471282.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	-56488264	False	NA	NA	False	AATATA	-44	NA	56488362	56479568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56479902_56480287_56480388_56487936
WTC11_00021828	chr12	-	3273	22	NIC	ENSG00000166888.12	novel	3119	22	NA	NA	31	18	combination_of_known_junctions	FALSE	canonical	3	15	junction_21	28.4632077428272	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCAGGGCCTAGGACG	-57110230	False	NA	NA	False	GGGGCT	-45	NA	57110258	57096181	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57109940
WTC11_00021830	chr12	-	1177	4	FSM	ENSG00000185633.11	ENST00000554503.6	943	4	-234	0	-234	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	-57237252	False	NA	NA	False	AATACA	-21	NA	57237338	57234902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57235620_57235748_57235810_57236592_57236682_57237028
WTC11_00021832	chr12	-	4172	23	NIC	ENSG00000179912.21	novel	4331	24	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	16.5739016189922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCACTGTTTCTCTG	-57430870	False	NA	-8	True	TATAAA	-21	NA	57430900	57253763	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
WTC11_00021838	chr12	-	2517	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCATGTTGGTCAGGCT	-59326823	False	NA	NA	False	NA	NA	NA	59326833	59318892	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_59320979_59326402
WTC11_00021844	chr12	-	883	6	NNC	ENSG00000185306.13	novel	1059	8	NA	NA	4507	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	12.9398608956974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64281570	64266982	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64281446
WTC11_00021845	chr12	-	930	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	5	0	5	0	multi-exon	FALSE	canonical	3	18	junction_4	6.40312423743285	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293194	True	NA	NA	False	AATAAA	-16	NA	64293378	64266982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
WTC11_00021848	chr12	-	571	7	FSM	ENSG00000155957.19	ENST00000534930.1	571	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	302.726912139197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCAGGATTCTTGAA	-66164649	True	NA	NA	False	ACTAAA	-41	NA	66169969	66138744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169289_66169354_66169854
WTC11_00021849	chr12	-	766	2	FSM	ENSG00000155957.19	ENST00000535812.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGTGATGAGTCCTGC	-66164692	True	NA	NA	False	NA	NA	NA	66170012	66168745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66169354_66169854
WTC11_00021852	chr12	-	2726	13	NIC	ENSG00000111554.15	novel	2980	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_12	16.9869230749879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	-68330947	True	NA	-1	True	AATAAA	-16	NA	68332253	68294565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68332227
WTC11_00021853	chr12	-	2980	14	NNC	ENSG00000111554.15	novel	2918	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	13	junction_10	15.2121097821331	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTTCCTTCTATACAT	-68331066	True	NA	NA	False	AATGAA	-41	NA	68332372	68294814	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325171_68325576_68326656_68327022_68331106_68331222_68332227
WTC11_00021854	chr12	-	2718	3	FSM	ENSG00000111554.15	ENST00000393543.7	2718	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATACGTAATTTTGT	-68331018	True	NA	NA	False	AATAAA	-22	NA	68332324	68325004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68327511_68331106_68331222_68332227
WTC11_00021860	chr12	-	1028	2	FSM	ENSG00000127329.16	ENST00000547715.1	639	2	-404	15	-348	-15	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAACCCTGGAATAATT	-70610182	False	NA	NA	False	ATTAAA	-2	NA	70610192	70608743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_70609340_70609760
WTC11_00021861	chr12	-	679	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-299	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	61.8079462708657	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	-71117151	True	NA	-6	True	AATAAA	-17	NA	71118546	71110215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_71110454_71115849_71115959_71118069_71118187_71118331
WTC11_00021862	chr12	-	887	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-299	-62823	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	71.6581390275305	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACCATCCTTCAAGTC	-71117151	True	NA	-15	True	AATAAA	-8	NA	71118546	71110224	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_71110671_71115849_71115959_71118069_71118187_71118331
WTC11_00021867	chr12	-	488	2	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATACAGTCTGTATCA	-74508820	True	NA	NA	False	AATAAA	-17	NA	74509542	74445474	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_74445821_74509400
WTC11_00021871	chr12	-	7118	24	NIC	ENSG00000091039.17	novel	7204	24	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_21	53.7467632119888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGATCAAGTGACTTTTA	-76554862	True	NA	0	True	AATAAA	-19	NA	76559694	76351796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450980_76459858_76459896_76487509_76487619_76559396
WTC11_00021872	chr12	-	956	8	NNC	ENSG00000175183.10	novel	908	6	NA	NA	0	70020	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	725.961375258593	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCGATTCCAACTTAAATA	-76853682	True	NA	NA	False	NA	NA	NA	76879019	76788688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_76788715_76858212_76858241_76858714_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
WTC11_00021873	chr12	-	1484	5	FSM	ENSG00000165891.16	ENST00000551558.1	1464	5	0	-20	0	20	multi-exon	FALSE	canonical	3	76	junction_2	19.0328663106743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGAATTTTTATTTA	-77061180	True	NA	NA	False	AAGAAA	-24	NA	77065563	77045601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
WTC11_00021874	chr12	-	8728	4	FSM	ENSG00000177425.11	ENST00000550603.1	482	4	-8244	-2	-6796	2	multi-exon	FALSE	canonical	2	17	junction_1	404.420847907501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTGTATGTGTT	NA	False	NA	-3	True	AATAAA	-21	NA	79604778	79584876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79585149_79592610_79592694_79594328_79594434_79596510
WTC11_00021875	chr12	-	510	1	FSM	ENSG00000230291.5	ENST00000492623.1	435	1	-25	-50	-25	50	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGCCTTATGACTAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	80103358	80102848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_80102800_80103400
WTC11_00021887	chr12	-	2415	10	NIC	ENSG00000120798.17	novel	1822	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	27	junction_1	43.0334351778925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069368	True	NA	0	True	AATAAA	-26	NA	95073576	95030408	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95031489_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
WTC11_00021890	chr12	-	4088	6	NIC	ENSG00000136014.12	novel	4008	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_5	297.532922548077	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95542238	True	NA	-2	True	ATTAAA	-21	NA	95548810	95516559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548525
WTC11_00021891	chr12	-	3647	5	NIC	ENSG00000136014.12	novel	4008	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	370.275826243086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95542238	True	NA	-2	True	ATTAAA	-21	NA	95548810	95516559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95518354_95520996_95521203_95524679_95524789_95532828_95534327_95548770
WTC11_00021892	chr12	-	2110	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	328.043228647676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATATTAATTTTCTCT	-96011596	True	NA	-10	True	ATTAAA	-14	NA	96035587	96000758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
WTC11_00021893	chr12	-	6109	19	FSM	ENSG00000111144.10	ENST00000553041.5	6109	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	421.58253076582	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGGCATATTCTTTG	-96011537	True	NA	-10	True	AATAAA	-17	NA	96035528	96000832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96020689_96020759_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
WTC11_00021894	chr12	-	1977	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_2	281.787251953174	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGGCATATTCTTTG	-96011596	True	NA	-10	True	AATAAA	-17	NA	96035587	96000832	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
WTC11_00021908	chr12	-	7251	14	FSM	ENSG00000111696.12	ENST00000392876.8	7244	14	0	-7	0	7	multi-exon	FALSE	canonical	2	8	junction_1	4.93987518707764	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGTCAGTCACCTAT	-103838995	True	NA	-10	True	AATAAA	-21	NA	103841234	103772302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103778082_103780299_103780365_103785334_103785476_103787440_103787528_103788837_103788920_103793163_103793266_103793409_103793513_103793936_103793998_103796893_103797032_103798586_103798678_103806321_103806378_103806854_103806930_103814936_103815122_103840948
WTC11_00021911	chr12	-	1601	8	NNC	ENSG00000120837.8	novel	1727	8	NA	NA	0	-157	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	185.924496415472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGTACGAGAGTTTG	-104133386	False	34	-15	True	ATTAAA	-7	NA	104138017	104119511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104137344
WTC11_00021920	chr12	-	8494	14	NIC	ENSG00000084112.15	novel	13034	15	NA	NA	0	2100	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	13.4599999120779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGATGACTGAGTTTAT	-108856190	True	NA	NA	False	AATAAA	-16	NA	108857590	108782696	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_108789245_108792285_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108857427
WTC11_00021921	chr12	-	2308	13	NIC	ENSG00000084112.15	novel	2354	14	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	13.8252988715937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCCTTTATCGATATA	-108856190	True	NA	-15	True	ATTAAA	-21	NA	108857590	108791923	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108857427
WTC11_00021923	chr12	-	1278	2	FSM	ENSG00000189046.11	ENST00000440112.2	574	2	-671	-33	9	0	multi-exon	FALSE	canonical	3	51	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091811	True	NA	-3	True	AATAAA	-17	NA	109093460	109088188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109088513_109092506
WTC11_00021924	chr12	-	1036	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	-6	0	5	multi-exon	FALSE	canonical	3	47	junction_3	29.2232783924049	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTCCCTCTCGAC	-109091823	True	NA	3	True	AATAAA	-23	NA	109093472	109088182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
WTC11_00021926	chr12	-	3263	16	FSM	ENSG00000111199.12	ENST00000674908.1	3266	16	4	-1	-1	0	multi-exon	FALSE	canonical	2	3	junction_12	6.06263602367448	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCAGGATGATGGCAGG	-109832967	True	NA	1	True	AATAAA	-22	NA	109833402	109783086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109783779_109784315_109784438_109786709_109786838_109788399_109788717_109792362_109792430_109792651_109792818_109793526_109793601_109793929_109794023_109794328_109794488_109796524_109796705_109798613_109798913_109800617_109800788_109802990_109803144_109808295_109808469_109814410_109814828_109833349
WTC11_00021936	chr12	-	4008	24	NIC	ENSG00000204842.18	novel	4380	26	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	52.9419198830886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	-111596099	True	NA	0	True	AATAAA	-45	NA	111599304	111452213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111479069_111479103_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510445_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00021937	chr12	-	4126	24	NIC	ENSG00000204842.18	novel	4347	25	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	41.4156395397646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	-111596099	True	NA	0	True	AATAAA	-45	NA	111599304	111452213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00021938	chr12	-	4239	24	NIC	ENSG00000204842.18	novel	4347	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	39.2714849147598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAAACTTAAAAA	-111596110	True	NA	-54	True	NA	NA	NA	111599315	111452267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
WTC11_00021943	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837616	True	NA	-4	True	AATAAA	-23	NA	111841902	111839766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840478_111841683
WTC11_00021964	chr12	-	7495	39	FSM	ENSG00000122966.17	ENST00000676849.1	7592	39	109	-12	-6	0	multi-exon	TRUE	canonical	3	25	junction_18	17.0365421172555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTTAGTGCAATGA	-119803375	False	NA	0	True	AATAAA	-18	NA	119803389	119685790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_119688256_119690150_119690455_119697658_119697839_119697975_119698055_119700744_119700826_119701623_119701753_119701849_119701959_119704362_119704456_119708178_119708319_119710250_119710387_119710539_119710621_119712177_119712348_119712590_119712696_119713202_119713295_119713467_119713649_119714196_119714335_119718244_119718410_119718698_119718817_119720477_119720586_119721308_119721450_119728501_119728607_119730494_119730631_119734163_119734358_119735159_119735358_119742410_119742465_119752049_119752248_119757370_119757546_119758590_119758701_119760938_119761056_119767086_119767183_119770784_119770911_119772769_119772911_119775785_119775840_119776357_119776409_119776671_119776843_119782517_119782638_119783907_119784052_119784959_119785066_119803205
WTC11_00021967	chr12	-	2593	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	-2	0	2	multi-exon	FALSE	canonical	3	21453	junction_5	1031.85685053693	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGACTCTTAAT	-119837707	True	NA	-25	True	AATAAA	-16	NA	120201110	120196704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
WTC11_00021987	chr12	-	5090	22	NNC	ENSG00000089094.20	novel	5315	23	NA	NA	1092	0	intron_retention	FALSE	canonical	0	0	junction_18	91.9985950794828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-121578443	False	5699	-27	True	AGTAAA	-20	NA	121578552	121429095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578394
WTC11_00021991	chr12	-	559	3	FSM	ENSG00000212694.8	ENST00000545885.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGCGGCCCCGCCCCA	-121802800	False	NA	NA	False	NA	NA	NA	121802886	121799755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121799957_121801706_121801809_121802630
WTC11_00022000	chr12	-	8188	24	Fusion	ENSG00000280120.1_ENSG00000051825.15	novel	6369	24	NA	NA	0	2	intron_retention	FALSE	canonical	3	31	junction_22	25.2754204892297	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTGTGTGTTTAT	-123230192	True	NA	1	True	AATAAA	-23	NA	123233107	123152317	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227573_123230260_123230523_123233074
WTC11_00022001	chr12	-	4546	6	Fusion	ENSG00000280120.1_ENSG00000051825.15	novel	6136	22	NA	NA	1	1	intron_retention	FALSE	canonical	2	4	junction_1	46.6218832738447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCTTTGTGTGTTTA	NA	False	NA	0	True	AATAAA	-22	NA	123163035	123152318	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_123155201_123155687_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013
WTC11_00022002	chr12	-	4223	25	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_21	34.0872043441524	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAGACTAGTACATGCT	-123230201	True	NA	-5	True	AATAAA	-18	NA	123233116	123156399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123226287_123226352_123227462_123227617_123230260_123230523_123233074
WTC11_00022003	chr12	-	3880	22	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_20	24.1286235867377	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGATAGACTAGTACA	-123230206	True	NA	-9	True	AATAAA	-14	NA	123233121	123156403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123230260_123230523_123233074
WTC11_00022005	chr12	-	8449	46	NNC	ENSG00000196498.13	novel	8475	47	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_37	103.071314159028	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAAAGGTTTCTTCTC	-124494996	True	NA	-13	True	ATTAAA	-17	NA	124495202	124324415	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356804_124362125_124362298_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429704_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146
WTC11_00022007	chr12	-	8974	49	NIC	ENSG00000196498.13	novel	8533	47	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_25	102.963313905569	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAAAGGTTTCTTCTC	-124561811	True	NA	-13	True	ATTAAA	-17	NA	124567586	124324415	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356783_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
WTC11_00022008	chr12	-	8044	49	NNC	ENSG00000196498.13	novel	8533	47	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_5	105.017142697831	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCGACAGCGAGTGACT	-124567477	False	NA	NA	False	NA	NA	NA	124567645	124325419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332465_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356804_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402559_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
WTC11_00022020	chr12	-	8931	24	FSM	ENSG00000090615.16	ENST00000450791.8	8938	24	7	0	0	0	multi-exon	FALSE	canonical	2	14	junction_23	8.07689884151277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATATTCATTGGAAGC	-132826621	True	NA	-15	True	AATAAA	-18	NA	132828862	132768913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132773295_132774156_132774321_132775140_132775306_132776633_132776757_132776957_132777091_132777665_132777806_132780797_132780915_132782295_132782494_132784163_132784308_132786338_132786556_132786692_132786788_132789026_132789291_132791215_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828802
WTC11_00022024	chr12	-	3232	20	NNC	ENSG00000072609.18	novel	11228	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_14	98.5233074214582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTGTTGGGCTCGTGTC	-132881428	True	NA	-3	True	AATAAA	-23	NA	132887572	132840348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132840749_132840811_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132862332_132862426_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
WTC11_00022025	chr12	-	3127	16	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_12	85.607216725902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-132887461	False	NA	-6	True	AATAAA	-20	NA	132887474	132840351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132870723_132870784_132872284_132872395_132877554_132877655_132887195
WTC11_00022026	chr12	-	3266	18	NIC	ENSG00000072609.18	novel	2648	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_13	74.4635253597124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTGTTGGGCTCGTGTC	-132881459	True	NA	-3	True	AATAAA	-23	NA	132887603	132840348	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
WTC11_00022031	chr12	-	1345	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	233	2675	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCCTGTTTTCATT	-132955206	False	NA	53	True	NA	NA	NA	132956029	132942122	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132943023_132945620_132945798_132955761
WTC11_00022032	chr12	+	836	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCACTCAACCCTCAGAC	NA	False	NA	NA	False	NA	NA	NA	25156	25992	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_25200_26000
WTC11_00022033	chr12	+	1329	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGAGACGGTG	8029594	False	NA	NA	False	NA	NA	NA	8029622	8030951	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_8029600_8031000
WTC11_00022034	chr12	+	789	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCCCCACCAGTACAG	8706430	False	NA	NA	False	NA	NA	NA	8706444	8707233	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_8706400_8707200
WTC11_00022035	chr12	+	208	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACATGAGGGCTAGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	10334810	10335018	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10334800_10335000
WTC11_00022036	chr12	+	677	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGGGAAAAGGGGTT	10336794	False	NA	NA	False	NA	NA	NA	10336807	10337484	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10336800_10337500
WTC11_00022037	chr12	+	430	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAAAAAGGGGGGTTG	13264823	False	NA	NA	False	NA	NA	NA	13264835	13265265	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_13264800_13265300
WTC11_00022038	chr12	+	1048	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGCTCTGTTCAGGA	48930243	False	NA	NA	False	NA	NA	NA	48930258	48931306	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_48930300_48931300
WTC11_00022041	chr12	+	233	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTAGCGCGGTCAGAA	72706639	False	NA	NA	False	AAAACA	-22	NA	72706657	72706890	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72706700_72706900
WTC11_00022042	chr12	+	331	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGTGGAATGTCATCAG	NA	False	NA	NA	False	NA	NA	NA	72816118	72816449	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72816100_72816400
WTC11_00022056	chr12	+	2526	2	FSM	ENSG00000177406.5	ENST00000670735.1	2526	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTGAGACTCAGAACC	642928	False	NA	-7	True	ATTAAA	-6	NA	643215	645862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_643838_643958
WTC11_00022057	chr12	+	10250	26	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	17.4908433187197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	750455	True	NA	23	True	AATAAA	-20	NA	752578	911452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878214_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00022058	chr12	+	11232	28	FSM	ENSG00000060237.19	ENST00000537687.5	11232	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	19.0252882033585	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	752881	False	NA	23	True	AATAAA	-20	NA	752922	911452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_867865_869105_871264_871349_878211_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
WTC11_00022059	chr12	+	699	3	FSM	ENSG00000111186.13	ENST00000543563.1	716	3	16	1	16	-1	multi-exon	FALSE	canonical	3	11	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGGCCATTACAAGAG	1629899	False	NA	NA	False	NA	NA	NA	1629912	1632905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1630227_1631297_1631435_1632657
WTC11_00022062	chr12	+	2871	10	NIC	ENSG00000078246.17	novel	3080	11	NA	NA	3	-83	intron_retention	FALSE	canonical	2	2	junction_8	39.7886391130576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATTTGTGTGTGCAGGT	2887390	True	NA	10	True	TATAAA	-10	NA	2890909	2941047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2938113_2938286_2939310
WTC11_00022063	chr12	+	1574	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	89.6765537781234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953918	True	NA	14	True	AATAAA	-17	NA	2959428	3040665	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
WTC11_00022064	chr12	+	2945	3	NNC	ENSG00000256969.2	novel	542	2	NA	NA	-2259	-2959	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	2	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	25	True	AATACA	-18	NA	4018717	4023654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4018830_4018981_4019140_4020979
WTC11_00022065	chr12	+	679	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5997	-1	-2078	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACGCCTAGATTGTAA	4017677	True	NA	39	True	AATAAA	-20	NA	4018898	4026659	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4019140_4026221
WTC11_00022066	chr12	+	1039	3	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTAAAGACAATGAGTA	4031452	False	NA	NA	False	AATAAA	-29	NA	4031468	4048487	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_4031515_4036313_4036409_4047589
WTC11_00022069	chr12	+	955	5	ISM	ENSG00000010219.14	ENST00000010132.6	1840	12	14591	-35	14	35	3prime_fragment	FALSE	canonical	3	31	junction_1	15.5804364508829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTGCACTTAAACTCA	4604120	True	NA	69	True	NA	NA	NA	4604910	4613923	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4605087_4607326_4607388_4610154_4610285_4612542_4612719_4613511
WTC11_00022070	chr12	+	2295	11	NNC	ENSG00000130035.9	novel	2321	11	NA	NA	364	2723	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.7131323919811	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAACGCCTATCTAGAT	4720751	False	NA	NA	False	AATAAA	-13	NA	4720763	4775867	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4720889_4726531_4726830_4739162_4739330_4744516_4744701_4745428_4745627_4746143_4746259_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4775247
WTC11_00022071	chr12	+	713	4	NNC	ENSG00000130035.9	novel	283	3	NA	NA	-179	110	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	16.391054470859	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGCATTATGCCATG	4763622	True	NA	28	True	AATAAA	-19	NA	4763788	4851113	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_4763862_4763951_4764048_4765378_4765547_4850737
WTC11_00022072	chr12	+	779	2	FSM	ENSG00000010292.13	ENST00000536538.1	765	2	-14	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCAGTATGTTGTGCAA	6491896	True	NA	NA	False	NA	NA	NA	6493386	6495165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6494076_6495075
WTC11_00022073	chr12	+	747	6	FSM	ENSG00000111652.10	ENST00000546229.5	744	6	-6	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_3	213.108798504426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAACCGTATCCTGGCA	6723546	True	NA	NA	False	NA	NA	NA	6724286	6729449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724331_6724613_6724819_6727670_6727801_6727925_6728002_6728222_6728312_6729246
WTC11_00022074	chr12	+	1387	6	FSM	ENSG00000010626.15	ENST00000433346.5	1387	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.22896460095897	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTCTCAGACTGGGTT	6873548	False	NA	NA	False	NA	NA	NA	6873568	6907733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6873782_6883703_6883920_6905584_6905760_6905844_6905955_6906408_6906663_6907314
WTC11_00022075	chr12	+	729	5	FSM	ENSG00000010626.15	ENST00000449039.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.8400802362146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTGGCTCAAGGCTGA	6873086	True	NA	NA	False	NA	NA	NA	6873681	6906514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6905584_6905760_6906408
WTC11_00022076	chr12	+	1197	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	11	0	11	0	multi-exon	FALSE	canonical	1	4	junction_6	5.14511634681104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	6904673	True	NA	22	True	AATAAA	-14	NA	6904851	6914228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
WTC11_00022077	chr12	+	2069	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	5	junction_1	35.5837614879688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945151	True	NA	10	True	AATAAA	-18	NA	6946614	6961316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_6946740_6951911_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
WTC11_00022078	chr12	+	958	8	FSM	ENSG00000126749.16	ENST00000261406.7	958	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	337.771447905841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGAATGCAGC	6957793	True	NA	NA	False	NA	NA	NA	6970941	6988260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6983001_6983207_6987781_6987839_6988167
WTC11_00022080	chr12	+	431	2	FSM	ENSG00000205885.8	ENST00000536679.5	550	2	3	116	3	-116	multi-exon	FALSE	canonical	1	2	junction_1	0	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTACCAATCCCAAGAC	7108420	True	NA	NA	False	NA	NA	NA	7108573	7110354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7108948_7110297
WTC11_00022081	chr12	+	3284	16	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	32.3573106972065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187106	True	NA	16	True	AATAAA	-25	NA	7189722	7211459	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7189751_7190021_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
WTC11_00022082	chr12	+	637	5	FSM	ENSG00000065970.9	ENST00000539192.1	637	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.8309001136617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTCTTTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	8049967	8053013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8050072_8050162_8050254_8050349_8050441_8050521_8050621_8052761
WTC11_00022083	chr12	+	2444	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	2	0	-1	0	multi-exon	FALSE	canonical	3	10	junction_3	86.5051379334713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	8080051	True	NA	18	True	ATTAAA	-14	NA	8082269	8097769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
WTC11_00022084	chr12	+	4909	5	FSM	ENSG00000089818.18	ENST00000544891.6	4899	5	-10	0	-1	0	multi-exon	FALSE	canonical	3	222	junction_2	21.342445970413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTATCTTTTAATTT	8080051	True	NA	20	True	ATTAAA	-16	NA	8082269	8097771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8093056_8095600_8095704_8096041
WTC11_00022085	chr12	+	568	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	0	52	0	-52	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTGAGAAAAAAACTACA	8320284	True	NA	NA	False	NA	NA	NA	8320380	8369503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8320427_8368981
WTC11_00022086	chr12	+	1653	5	NNC	ENSG00000166532.16	novel	4931	6	NA	NA	-67	4284	intron_retention	FALSE	canonical	3	37	junction_1	113.537163519264	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCGTTCTCAATTTGT	8697390	True	NA	NA	False	ATTAAA	-7	NA	8697613	8754313	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8698298_8713814_8714042_8749861_8750093_8751956_8752044_8753889
WTC11_00022087	chr12	+	552	3	ISM	ENSG00000166532.16	ENST00000619374.4	1519	8	63847	0	0	0	3prime_fragment	FALSE	canonical	3	156	junction_1	611.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8777575	False	NA	25	True	AATAAA	-16	NA	8777589	8783085	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_8777803_8780574_8780740_8782911
WTC11_00022089	chr12	+	1186	2	FSM	ENSG00000237248.5	ENST00000427111.4	2472	2	0	1286	0	-1286	multi-exon	FALSE	canonical	2	3	junction_1	0	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCCAAAATTAGGATAT	NA	False	NA	NA	False	NA	NA	NA	9240002	9241766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9240540_9241117
WTC11_00022090	chr12	+	3982	28	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	6787	859	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	105.883985481017	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGATATGTGCTGCTG	9281915	True	NA	NA	False	ATTAAA	-28	NA	9284021	9314100	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9284134_9288274_9288350_9293661_9293911_9294029_9294247_9294431_9294519_9294816_9294975_9297780_9297827_9298420_9298529_9298779_9298868_9299259_9299469_9301093_9301247_9302227_9302275_9302622_9302703_9303974_9304020_9304139_9304208_9305718_9305758_9306014_9306124_9306236_9306369_9307201_9307315_9309872_9310021_9310338_9310442_9311140_9311291_9311549_9311619_9311730_9311832_9312277_9312324_9312616_9312696_9312874_9313030_9313104
WTC11_00022092	chr12	+	3241	5	NNC	ENSG00000069493.15	novel	5277	5	NA	NA	-1144	573	intron_retention	FALSE	canonical	1	1	junction_1	11.9869720947369	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTTTAGTTTTTAAAG	NA	False	NA	27	True	GATAAA	-41	NA	9679780	9696390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9681034_9681906_9681975_9687901_9688087_9692827_9692932_9694759
WTC11_00022094	chr12	+	211	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATGGAGAGAGAATGGG	NA	False	NA	NA	False	AATAAA	-43	NA	11462483	11462694	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11462500_11462700
WTC11_00022096	chr12	+	5761	8	NNC	ENSG00000139083.11	novel	652	3	NA	NA	-40357	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.972153062549	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGTCCAGAGTCTCTG	11609116	True	NA	NA	False	AATAAA	-23	NA	11609316	11895403	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_11609395_11752449_11752580_11839139_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940
WTC11_00022097	chr12	+	528	2	FSM	ENSG00000121380.12	ENST00000588270.1	583	2	55	0	9	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAGATTTTTGTAACTG	12079291	False	NA	NA	False	NA	NA	NA	12079307	12087309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12079739_12087212
WTC11_00022098	chr12	+	549	3	FSM	ENSG00000165714.11	ENST00000298571.6	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATCTGACCAGGTC	12357407	False	NA	NA	False	GGGGCT	-45	NA	12357417	12465844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357510_12435627_12435786_12465545
WTC11_00022101	chr12	+	559	3	NNC	ENSG00000214772.2	novel	657	5	NA	NA	44469	-24161	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	23	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGCTTAATGTGTAAT	14710109	False	NA	NA	False	NA	NA	NA	14710123	14733802	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_14710236_14718034_14718076_14733396
WTC11_00022103	chr12	+	202	2	FSM	ENSG00000008394.13	ENST00000538885.5	202	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAATTTGGAGGTAAT	16350709	False	NA	NA	False	AAGAAA	-2	NA	16350745	16354378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16350800_16354230
WTC11_00022104	chr12	+	443	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACCTCCTTCACGCAAG	16358652	False	NA	NA	False	NA	NA	NA	16358779	16359222	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_16358800_16359200
WTC11_00022105	chr12	+	4620	27	NIC	ENSG00000052126.15	novel	4797	32	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_18	79.6960201095499	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	19129435	False	NA	12	True	AATAAA	-17	NA	19129600	19376400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19346993_19347183_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
WTC11_00022107	chr12	+	421	1	FSM	ENSG00000243854.3	ENST00000492147.3	296	1	17	-142	17	142	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTCTGCCTCAGCCT	NA	False	NA	NA	False	NA	NA	NA	19303496	19303917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19303500_19303900
WTC11_00022108	chr12	+	353	1	FSM	ENSG00000255909.1	ENST00000543528.1	309	1	88	-132	88	132	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAAAGAATGGCTATT	NA	False	NA	NA	False	AATAAA	-25	NA	19413240	19413593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19413200_19413600
WTC11_00022111	chr12	+	519	4	FSM	ENSG00000111726.13	ENST00000538498.1	538	4	19	0	19	0	multi-exon	FALSE	canonical	3	1273	junction_2	87.788888185743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGCAAAGAGTATTAAG	22041873	False	NA	NA	False	NA	NA	NA	22055137	22060906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22055292_22055454_22055611_22058566_22058701_22060831
WTC11_00022112	chr12	+	7108	9	NNC	ENSG00000139163.16	novel	1659	9	NA	NA	8	3829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	41.6096067633425	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAGCAGCCCCAA	22621015	True	NA	NA	False	NA	NA	NA	22625149	22694494	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881_22690661_22694465
WTC11_00022113	chr12	+	1182	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	0	49	0	-49	multi-exon	FALSE	canonical	3	10	junction_2	63	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATAAAAATAGATTTGT	22625341	False	NA	NA	False	NA	NA	NA	22625381	22657148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22625587_22643762_22644023_22656431
WTC11_00022114	chr12	+	2428	2	FSM	ENSG00000256923.1	ENST00000537293.1	424	2	-38	-1966	-38	1966	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTTAGTTACATTGT	NA	False	NA	NA	False	AATAAA	-29	NA	22742543	22745057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22742633_22742718
WTC11_00022115	chr12	+	1918	1	FSM	ENSG00000278969.1	ENST00000625186.1	2373	1	448	7	448	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGTCTCCTGAGCAGT	NA	False	NA	NA	False	AATATA	-11	NA	24902756	24904674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_24902800_24904700
WTC11_00022116	chr12	+	3093	3	FSM	ENSG00000205707.11	ENST00000557540.7	1259	3	20	-1854	-1	1846	multi-exon	FALSE	canonical	3	14	junction_1	39.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGATCGAAGAGTTTCA	25194075	True	NA	NA	False	CATAAA	-3	NA	25195235	25206989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25195342_25203919_25204008_25204090
WTC11_00022117	chr12	+	809	1	FSM	ENSG00000274987.1	ENST00000612734.1	582	1	-147	-80	-147	80	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAATCCCAGCACTTTG	NA	False	NA	NA	False	TTTAAA	-32	NA	25210504	25211313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25210500_25211300
WTC11_00022118	chr12	+	1125	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	-86	-174	-72	174	multi-exon	FALSE	canonical	3	207	junction_1	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCAGAAGTTCAAGACCA	26933114	True	NA	NA	False	NA	NA	NA	26938397	26958145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
WTC11_00022119	chr12	+	4189	16	NNC	ENSG00000029153.15	novel	6785	16	NA	NA	-9	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.2791222886189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAGAGTGAAATTAT	27330758	True	NA	NA	False	TTTAAA	-15	NA	27332826	27425208	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395_27421088_27423587
WTC11_00022120	chr12	+	1954	15	FSM	ENSG00000029153.15	ENST00000395901.6	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.9096151478387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	27330851	True	NA	-39	True	NA	NA	NA	27332919	27420533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27333137_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
WTC11_00022122	chr12	+	1739	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	-24	0	-11	0	multi-exon	FALSE	canonical	3	27	junction_5	227.640554871539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	27702299	True	NA	NA	False	AATAAA	-16	NA	27710810	27756294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
WTC11_00022123	chr12	+	2379	11	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	46.0677761564415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187511	True	NA	17	True	AATAAA	-18	NA	28190472	28550166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00022124	chr12	+	2638	15	NNC	ENSG00000123106.11	novel	2738	16	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.2049794513665	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187514	True	NA	17	True	AATAAA	-18	NA	28190475	28550166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_28190642_28210962_28211035_28225794_28225862_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
WTC11_00022126	chr12	+	1609	1	FSM	ENSG00000123106.11	ENST00000624946.1	2173	1	110	454	110	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTCCCTTAACTTCA	NA	False	NA	NA	False	NA	NA	NA	28579448	28581057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28579400_28581100
WTC11_00022127	chr12	+	4068	1	FSM	ENSG00000257599.4	ENST00000641955.1	5529	1	743	718	395	-718	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGCTGTACTATAAGA	29390009	False	NA	NA	False	NA	NA	NA	29390031	29394099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29390000_29394100
WTC11_00022129	chr12	+	6020	8	FSM	ENSG00000110900.16	ENST00000546076.6	5506	8	-409	-105	-89	102	multi-exon	FALSE	canonical	2	8	junction_7	5.52545131594678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGCTCCCCTATGAGTAAA	NA	False	NA	NA	False	ATTAAA	-45	NA	30926338	30996704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30926797_30953980_30954076_30963825_30964018_30978560_30978636_30979565_30979671_30982531_30982691_30983063_30983151_30991855
WTC11_00022130	chr12	+	1571	2	FSM	ENSG00000110900.16	ENST00000545802.1	1649	2	0	78	0	-78	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGCGATCTGCTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	30926427	30955182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30926797_30953980
WTC11_00022131	chr12	+	4169	29	NNC	ENSG00000013573.17	novel	3920	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	141.652073578115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067649	True	NA	15	True	AATAAA	-16	NA	31073859	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_31074092_31077944_31078108_31078194_31078289_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00022134	chr12	+	4467	27	NNC	ENSG00000013573.17	novel	652	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	121.026355386853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31071333	True	NA	15	True	AATAAA	-16	NA	31074263	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_31074545_31078177_31078289_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00022136	chr12	+	1679	7	ISM	ENSG00000013573.17	ENST00000228264.10	3717	27	27918	0	265	0	3prime_fragment	FALSE	canonical	3	363	junction_6	66.0572142582137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31101753	False	NA	15	True	AATAAA	-16	NA	31101777	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
WTC11_00022137	chr12	+	1429	4	NIC	ENSG00000013573.17	novel	3724	26	NA	NA	16	0	intron_retention	FALSE	canonical	3	8	junction_3	254.765687555361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31102259	False	NA	15	True	AATAAA	-16	NA	31102283	31104791	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31102312_31102426_31102528_31102935_31103021_31103576
WTC11_00022138	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	92.9122569955116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	31950925	True	NA	-39	True	NA	NA	NA	31959437	31992941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
WTC11_00022141	chr12	+	4084	1	FSM	ENSG00000276115.1	ENST00000614539.1	1796	1	-2308	20	-2308	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGATTTTTGCATGA	NA	False	NA	-13	True	NA	NA	NA	32350040	32354124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32350000_32354100
WTC11_00022147	chr12	+	1455	1	FSM	ENSG00000257316.1	ENST00000553060.1	1233	1	6	-228	6	228	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAACAACTCCCCCCCGC	NA	False	NA	NA	False	ATTAAA	-1	NA	32985843	32987298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32985800_32987300
WTC11_00022148	chr12	+	215	1	ISM	ENSG00000175548.9	ENST00000308742.9	10050	3	11985	748	11920	-748	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATTACAAAATAACTGT	NA	False	NA	NA	False	NA	NA	NA	38328758	38328973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_38328800_38329000
WTC11_00022149	chr12	+	208	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTGTCTTTTTGCAT	NA	False	NA	NA	False	AAGAAA	-20	NA	42289482	42289690	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_42289500_42289700
WTC11_00022152	chr12	+	2586	7	FSM	ENSG00000139173.10	ENST00000551577.5	2643	7	-2	59	0	-59	multi-exon	TRUE	canonical	0	0	junction_6	3.02305952453618	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTTTTTTAAGA	43836002	False	NA	-57	True	NA	NA	NA	43836080	44389699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_43836197_43844623_43844929_43944209_43944343_44143524_44143625_44211289_44211388_44299579_44299740_44388025
WTC11_00022153	chr12	+	6074	21	FSM	ENSG00000177119.17	ENST00000423947.7	5504	21	-3	-567	-3	0	multi-exon	FALSE	canonical	2	16	junction_1	99.8173832556234	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGTCTATTCTATAT	45210840	True	NA	18	True	AATAAA	-18	NA	45216081	45432349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45216392_45270461_45270525_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
WTC11_00022155	chr12	+	596	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	10	157374	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	22.1560124771785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46382059	True	NA	7	True	AATAAA	-18	NA	46383688	46652577	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_46383714_46387746_46387973_46571255_46571413_46652389
WTC11_00022156	chr12	+	282	4	FSM	ENSG00000257433.7	ENST00000692059.1	1311	4	70	959	4	-298	multi-exon	FALSE	canonical	1	2	junction_2	5.65685424949238	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGGCCTTGAGAGAGA	47706037	True	NA	NA	False	NA	NA	NA	47706127	47728906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47706164_47719146_47719273_47719599_47719700_47728886
WTC11_00022157	chr12	+	2059	4	NIC	ENSG00000211584.14	novel	577	4	NA	NA	0	869	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	47.8632310744781	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTCTTGCGGGAACAG	47758831	True	NA	42	True	AATACA	-40	NA	47758993	47781693	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_47759150_47760215_47760402_47779027_47779196_47780144
WTC11_00022158	chr12	+	1342	7	ISM	ENSG00000134291.12	ENST00000429772.7	1539	8	701	0	56	0	3prime_fragment	FALSE	canonical	3	308	junction_4	53.3718610838666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47964285	False	NA	17	True	AATAAA	-17	NA	47964296	47968878	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
WTC11_00022160	chr12	+	2865	12	NIC	ENSG00000167535.8	novel	2931	13	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	9.28786642937534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	48818398	False	NA	5	True	AATAAA	-15	NA	48818541	48828941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
WTC11_00022161	chr12	+	1324	2	FSM	ENSG00000257913.3	ENST00000552933.2	1324	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACACTTGTCAGCGATTT	48998231	True	NA	4	True	AATAAA	-13	NA	48998366	49019235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48998691_49018235
WTC11_00022168	chr12	+	2875	10	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	217	1157	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	89.0469428149634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTGACTCTGAAATACT	50400052	True	NA	10	True	AATAAA	-18	NA	50401409	50456119	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313
WTC11_00022169	chr12	+	4702	17	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	236	792	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	93.55544395571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGAGAGTGTGTGTG	50400071	True	NA	NA	False	NA	NA	NA	50401428	50478309	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
WTC11_00022170	chr12	+	8727	39	NNC	ENSG00000066084.13	novel	8705	38	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	20.2971178173097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATCCTTCACAC	50498350	True	NA	10	True	AATAAA	-14	NA	50504995	50748657	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50505241_50625975_50626048_50640723_50640853_50655010_50655041_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675452_50678678_50678877_50680671_50680764_50683137_50683249_50685832_50685957_50686572_50686683_50691048_50691152_50692948_50693014_50695266_50695361_50695847_50695968_50697060_50697176_50698327_50698468_50699065_50699203_50704139_50704221_50706537_50706666_50708447_50708563_50714394_50714597_50718708_50718819_50718954_50719036_50721272_50721397_50723201_50723324_50724774_50724887_50727702_50727813_50728547_50728679_50731368_50731538_50732365_50732537_50734134_50734197_50735072_50735131_50737035_50737111_50739408_50739587_50741415_50741540_50744586
WTC11_00022171	chr12	+	3686	2	FSM	ENSG00000183283.16	ENST00000552459.2	3664	2	-22	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACTGCAAGGATTCTT	51234885	True	NA	NA	False	AATAAA	-43	NA	51238885	51243784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51241117_51242329
WTC11_00022172	chr12	+	1037	2	Antisense	novelGene_ENSG00000170545.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCTA	51247654	True	NA	7	True	AATAAA	-18	NA	51247720	51249257	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_51247979_51248478
WTC11_00022175	chr12	+	2046	7	FSM	ENSG00000123358.20	ENST00000550082.5	2029	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	61	junction_1	18.0316080505564	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTCCACCTTCTCAC	52041777	False	NA	NA	False	NA	NA	NA	52041787	52059049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
WTC11_00022176	chr12	+	2607	8	FSM	ENSG00000123358.20	ENST00000243050.5	2678	8	71	0	10	0	multi-exon	FALSE	canonical	1	1	junction_1	46.5293411928079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAGTCTGTCTCTGAT	52051206	False	NA	18	True	AATAAA	-24	NA	52051472	52059506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52051569_52052495_52052646_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
WTC11_00022177	chr12	+	295	1	FSM	ENSG00000257542.5	ENST00000548970.2	984	1	101	588	101	123	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGTGTGATGGCCTA	NA	False	NA	NA	False	NA	NA	NA	52107378	52107673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52107400_52107700
WTC11_00022179	chr12	+	967	4	FSM	ENSG00000167779.9	ENST00000548547.5	1177	4	205	5	-26	0	multi-exon	FALSE	canonical	1	2	junction_1	33.8657480190367	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097112	True	NA	10	True	AATAAA	-16	NA	53097640	53102340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53098052_53100717_53100858_53101040_53101161_53102044
WTC11_00022180	chr12	+	403	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	-11	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53298044_53298151_53299268
WTC11_00022183	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	866.227452809018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	53433768	True	NA	25	True	AATAAA	-18	NA	53441731	53446636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
WTC11_00022184	chr12	+	1580	13	FSM	ENSG00000257379.1	ENST00000547717.1	1571	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	15	junction_3	571.522430783682	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGATGCTTGTCAGGC	53433768	True	NA	NA	False	AAAAAG	-24	NA	53441731	53467528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220
WTC11_00022185	chr12	+	1368	13	NIC	ENSG00000197111.16	novel	1730	14	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	256.562154046322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53452118	True	NA	32	True	ATTAAA	-16	NA	53452209	53479614	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00022187	chr12	+	1223	13	NIC	ENSG00000197111.16	novel	3159	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_2	205.782702949819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGATGCTGAGATCCA	53454548	True	NA	42	True	ATTAAA	-26	NA	53454809	53479624	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
WTC11_00022188	chr12	+	1105	9	NNC	ENSG00000197111.16	novel	1814	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	303.756892925905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACAGTGATTCATGTG	53460616	True	NA	39	True	ATTAAA	-39	NA	53461014	53479821	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53461143_53462479_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
WTC11_00022191	chr12	+	1500	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	-13	27	0	0	multi-exon	FALSE	canonical	3	44	junction_5	156.83903970313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	53501005	True	NA	-8	True	AATGAA	-22	NA	53501590	53506396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
WTC11_00022192	chr12	+	2067	10	FSM	ENSG00000135486.19	ENST00000678077.1	2067	10	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_1	4694.44107297709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAATGAAATGACAACT	54066944	False	NA	8	True	AATAAA	-12	NA	54280871	54285239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54281296_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
WTC11_00022196	chr12	+	367	4	FSM	ENSG00000111481.10	ENST00000548076.5	367	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	677.212423591495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCTATGTGATTGGCA	NA	False	NA	NA	False	NA	NA	NA	54301219	54343279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54301381_54340546_54340616_54342205_54342288_54343224
WTC11_00022202	chr12	+	563	5	FSM	ENSG00000182796.15	ENST00000637092.1	552	5	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	18.0969610708539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCTTGGCTCACTGTA	55829925	True	NA	NA	False	NA	NA	NA	55830827	55834323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55831256_55831350_55832958_55833039_55833446_55833542_55834284
WTC11_00022203	chr12	+	2235	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	-5	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	55829925	True	NA	12	True	AATAAA	-19	NA	55830827	55836246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55832958_55833542_55834850
WTC11_00022205	chr12	+	2754	24	FSM	ENSG00000065357.20	ENST00000394147.5	2770	24	16	0	-7	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3599144747165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGGTACACTTCCT	55931773	True	NA	24	True	AATAAA	-31	NA	55932043	55954021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55932256_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
WTC11_00022207	chr12	+	2860	3	FSM	ENSG00000139531.13	ENST00000394109.7	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	33.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55999797	False	NA	19	True	AATAAA	-21	NA	56001497	56005525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56002272_56002542_56002721_56003617
WTC11_00022208	chr12	+	5139	9	NIC	ENSG00000123411.15	novel	5229	12	NA	NA	-252	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	10.087120500916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	56007395	False	NA	8	True	AATAAA	-19	NA	56007406	56038435	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56007735_56011416_56011495_56018125_56018178_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
WTC11_00022209	chr12	+	5229	12	FSM	ENSG00000123411.15	ENST00000262032.9	5229	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	12.6810850227956	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	56007278	False	NA	8	True	AATAAA	-19	NA	56007658	56038435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56007735_56011416_56011495_56018125_56018178_56019317_56019416_56021430_56021581_56023670_56023765_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
WTC11_00022213	chr12	+	523	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	-66	-122	-24	0	multi-exon	FALSE	canonical	3	234	junction_2	9942.56822399972	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56116484	False	NA	7	True	AATAAA	-38	NA	56116565	56117832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
WTC11_00022214	chr12	+	1258	5	FSM	ENSG00000196465.10	ENST00000405661.8	1258	5	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	120.741459325287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTGAGCCGAGAGATC	56145630	True	NA	NA	False	NA	NA	NA	56152589	56156242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418
WTC11_00022215	chr12	+	720	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.630404016932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56145630	True	NA	18	True	AATAAA	-14	NA	56152589	56157976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
WTC11_00022216	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	69.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56157333	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56157546_56157697_56157736_56157881
WTC11_00022218	chr12	+	674	2	FSM	ENSG00000135469.14	ENST00000551566.1	654	2	-20	0	-20	0	multi-exon	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCCACTCTTCCGACC	56265634	True	NA	NA	False	NA	NA	NA	56266869	56268084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267253_56267793
WTC11_00022220	chr12	+	285	2	Antisense	novelGene_ENSG00000166881.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAACACTCCATTCCA	NA	False	NA	NA	False	NA	NA	NA	57081352	57084356	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_57081387_57084105
WTC11_00022221	chr12	+	2148	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	70	-3	-18	3	multi-exon	FALSE	canonical	3	124	junction_2	320.366352790052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCTGTTTGATCCCTG	NA	False	NA	31	True	AATGAA	-19	NA	57229642	57234938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
WTC11_00022222	chr12	+	837	6	FSM	ENSG00000182199.11	ENST00000554600.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	437.08278392085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGGTGGGGGGGGCTG	57205491	True	NA	NA	False	NA	NA	NA	57229683	57232572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424
WTC11_00022224	chr12	+	769	4	ISM	ENSG00000111087.10	ENST00000228682.7	3972	12	139	7325	139	0	5prime_fragment	FALSE	canonical	3	27	junction_2	4.49691252107735	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACCCTATTTGAATCCT	57458429	False	NA	9	True	ATTAAA	-21	NA	57459923	57464943	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_57460202_57463664_57463792_57463998_57464092_57464672
WTC11_00022225	chr12	+	528	3	FSM	ENSG00000166986.15	ENST00000548714.5	567	3	-12	51	0	40	multi-exon	FALSE	canonical	3	1315	junction_2	22.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGGTCTTGAGATGA	57468922	True	NA	NA	False	NA	NA	NA	57488055	57489559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266
WTC11_00022226	chr12	+	450	4	FSM	ENSG00000166986.15	ENST00000551842.5	662	4	-12	224	0	40	multi-exon	FALSE	canonical	3	1315	junction_2	18.4089350286454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGGTCTTGAGATGA	57468922	True	NA	NA	False	NA	NA	NA	57488055	57489559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423
WTC11_00022228	chr12	+	734	7	FSM	ENSG00000166986.15	ENST00000552914.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_3	554.950273047555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	57512837	True	NA	15	True	AATAAA	-25	NA	57512929	57516655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57512965_57514719_57514852_57514953_57515015_57515216_57515337_57515919_57515992_57516244_57516338_57516434
WTC11_00022231	chr12	+	3299	27	ISM	ENSG00000155980.13	ENST00000455537.7	5779	29	12	3941	12	63	5prime_fragment	FALSE	canonical	2	10	junction_7	8.74499011268772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCCCCACTTGGAGGT	57549246	True	NA	NA	False	ATTAAA	-6	NA	57550055	57582692	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_57550401_57563438_57563527_57563619_57563694_57564107_57564213_57564459_57564509_57564917_57564974_57567125_57567214_57567493_57567619_57568962_57569068_57569255_57569405_57569534_57569684_57569986_57570163_57571320_57571390_57572060_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601
WTC11_00022232	chr12	+	2819	11	NIC	ENSG00000166908.18	novel	2876	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	68.7662708018982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587771	True	NA	10	True	AATAAA	-15	NA	57591196	57603418	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57591401_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525_57601637_57601925
WTC11_00022235	chr12	+	1336	5	FSM	ENSG00000178498.16	ENST00000549583.5	1331	5	-5	0	-5	0	multi-exon	FALSE	canonical	3	17	junction_4	54.2908832125616	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCTTCTATGGGCAG	57604571	False	NA	NA	False	AAAAAG	-14	NA	57604633	57607467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606883
WTC11_00022236	chr12	+	2005	7	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.429080720771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604702	False	NA	17	True	AATAAA	-23	NA	57604724	57609800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
WTC11_00022241	chr12	+	2606	7	FSM	ENSG00000123297.20_ENSG00000270039.1	ENST00000550559.5	897	7	-69	-1640	-43	-1	multi-exon	FALSE	canonical	2	4	junction_5	217.31288247338	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCACAGGTTTTTCT	57782704	False	NA	5	True	AATAAA	-13	NA	57782717	57804414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802173_57802265_57802554
WTC11_00022242	chr12	+	693	1	FSM	ENSG00000269903.1	ENST00000602327.1	433	1	-266	6	-266	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAACCGTGTTTTAGTAC	NA	False	NA	NA	False	GATAAA	-21	NA	57814227	57814920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57814200_57814900
WTC11_00022244	chr12	+	1814	2	NNC	ENSG00000286279.2	novel	6636	2	NA	NA	-898	5302	at_least_one_novel_splicesite	TRUE	canonical	2	307	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTGTGCAGATACT	NA	False	NA	NA	False	NA	NA	NA	59321864	59328995	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_59323554_59328870
WTC11_00022245	chr12	+	3475	21	NIC	ENSG00000135655.16	novel	1087	7	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	3	junction_1	60.0666296707248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATTAATTA	62305579	False	NA	22	True	AATAAA	-15	NA	62305594	62404642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_62306059_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62374389_62374536_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
WTC11_00022247	chr12	+	14636	9	NNC	ENSG00000061987.16	novel	13263	35	NA	NA	-1951	1360	intron_retention	FALSE	canonical	1	1	junction_4	51.8621972153128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGATAATTTACCTTTG	NA	False	NA	NA	False	NA	NA	NA	62557958	62598943	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578402_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
WTC11_00022249	chr12	+	2787	14	NNC	ENSG00000196935.9	novel	22920	22	NA	NA	-872	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	7.15756727043269	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTGGACCAAGATGCT	63843777	False	NA	NA	False	NA	NA	NA	63843827	64115845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789_64042973_64043446_64043576_64062916_64063139_64065117_64065220_64078918_64079117_64080285_64080371_64086998_64087026_64108931_64109038_64111761_64111987_64115813
WTC11_00022250	chr12	+	1422	10	FSM	ENSG00000196935.9	ENST00000537556.1	2976	10	0	1554	0	-1554	multi-exon	FALSE	canonical	3	11	junction_6	5.32870169256969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTATCCAAAATGTAT	63844782	False	NA	NA	False	NA	NA	NA	63844802	64080370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789_64042973_64043446_64043576_64062916_64063139_64065117_64065220_64078918_64079117_64080285
WTC11_00022251	chr12	+	6200	4	ISM	ENSG00000196935.9	ENST00000543397.1	5652	21	143474	-4080	-1638	27	3prime_fragment	FALSE	canonical	3	11	junction_2	4.78423336480244	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTCTGTGGTGTCTTTG	NA	False	NA	31	True	AATAAA	-43	NA	64125998	64147860	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_64126158_64127589_64127725_64127860_64128201_64142294
WTC11_00022252	chr12	+	3007	21	NIC	ENSG00000183735.11	novel	3151	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.0705979991578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	64448682	False	NA	15	True	AATAAA	-21	NA	64452342	64502114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_64452396_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
WTC11_00022253	chr12	+	3275	4	FSM	ENSG00000153179.13	ENST00000283172.8	1099	4	-18	-2158	0	6	multi-exon	FALSE	canonical	1	5	junction_2	61.059169845505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTTATTTATGAT	64604894	True	NA	19	True	ATTAAA	-21	NA	64610494	64697570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64610744_64684786_64684895_64691469_64691580_64694762
WTC11_00022254	chr12	+	2840	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	19	0	-1	0	multi-exon	TRUE	canonical	0	0	junction_20	175.167412494448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	68676192	True	NA	29	True	AATAAA	-40	NA	68686969	68742692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
WTC11_00022255	chr12	+	278	2	FSM	ENSG00000111581.10	ENST00000539373.1	278	2	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTCTTCCTGTTTCTG	68690625	False	NA	NA	False	NA	NA	NA	68690670	68692169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68690747_68691967
WTC11_00022263	chr12	+	1735	12	NIC	ENSG00000127328.22	novel	9333	11	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	54.120007452065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGTGTACATTTTCT	69734919	True	NA	12	True	AATAAA	-13	NA	69738887	69815721	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_69739032_69755383_69755479_69755570_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
WTC11_00022264	chr12	+	2691	9	FSM	ENSG00000127328.22	ENST00000553099.5	2674	9	-17	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	62.6313619522999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATACTGTACGGTTTG	69778566	True	NA	NA	False	AATAAA	-16	NA	69778949	69817117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69779097_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
WTC11_00022265	chr12	+	10851	2	FSM	ENSG00000127328.22	ENST00000481897.1	3003	2	-838	-7010	-838	1183	multi-exon	FALSE	canonical	3	218	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGGATATATATATAAACA	69811195	False	NA	NA	False	AATAAA	-19	NA	69811206	69824387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69813034_69815363
WTC11_00022266	chr12	+	427	2	Antisense	novelGene_ENSG00000257815.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCCAGTTCCCTTATT	70085741	False	NA	NA	False	NA	NA	NA	70085798	70088142	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_70085876_70087792
WTC11_00022267	chr12	+	1682	4	FSM	ENSG00000111596.14	ENST00000552151.2	1682	4	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_2	32.8870119584549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGGCTCTTCTCTA	70310945	False	NA	NA	False	ATTAAA	-15	NA	70310962	70331698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70311018_70319297_70319365_70329422_70329571_70330286
WTC11_00022269	chr12	+	1718	4	FSM	ENSG00000180481.11	ENST00000320460.8	1729	4	11	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATGGTAGAATGATTT	75391096	True	NA	NA	False	AATAAA	-17	NA	75391119	75424040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_75391351_75410433_75410680_75413597_75413702_75422903
WTC11_00022270	chr12	+	730	1	FSM	ENSG00000258090.1	ENST00000548926.1	724	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGGACATCCCCATCT	NA	False	NA	NA	False	NA	NA	NA	76757184	76757914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_76757200_76757900
WTC11_00022272	chr12	+	7423	17	NIC	ENSG00000186908.15	novel	4732	17	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	11	junction_7	20.8326666559997	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTGTGTGCTTATGAT	76763114	True	NA	24	True	AATAAA	-9	NA	76764255	76853691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76821057_76821168_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
WTC11_00022273	chr12	+	4787	17	NIC	ENSG00000186908.15	novel	4732	17	NA	NA	12	251	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	18.5539753152795	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTCCATGTAGTT	76763128	False	NA	6	True	AATAAA	-21	NA	76764269	76853947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815897_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
WTC11_00022275	chr12	+	698	4	FSM	ENSG00000067798.16	ENST00000550503.1	698	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAGGATGATGATGCC	NA	False	NA	NA	False	NA	NA	NA	77966275	78006766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_77966302_77968518_77968703_77998336_77998477_78006418
WTC11_00022277	chr12	+	548	2	NNC	ENSG00000067715.14	novel	4592	10	NA	NA	-40	-300383	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATATTGAGTTGAAATG	78855863	True	NA	NA	False	AATAAA	-16	NA	78864733	78917134	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_78865110_78916962
WTC11_00022278	chr12	+	4787	12	NIC	ENSG00000067715.14	novel	4705	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	49.9104984070453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	78855926	True	NA	13	True	AATAAA	-21	NA	78864796	79452008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_78865110_78955461_78955567_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
WTC11_00022279	chr12	+	771	4	NIC	ENSG00000257474.5	novel	816	3	NA	NA	78	-16	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGAGTTCAATCTGTA	79539808	False	NA	13	True	AATAGA	-18	NA	79540280	79550519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_79540447_79542308_79542392_79546065_79546177_79550108
WTC11_00022280	chr12	+	772	1	Genic_Genomic	ENSG00000257474.5	novel	NA	NA	NA	NA	-687	-940	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACGCATGAAAGTAACCA	79544829	False	NA	NA	False	NA	NA	NA	79544842	79545614	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_+_79544800_79545600
WTC11_00022282	chr12	+	558	5	FSM	ENSG00000127720.8	ENST00000550298.1	679	5	0	121	0	-121	multi-exon	FALSE	canonical	3	32	junction_2	6.04152298679729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCTCTAATGATTCCT	NA	False	NA	NA	False	ATTAAA	-2	NA	82399358	82438966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717
WTC11_00022286	chr12	+	2922	12	NNC	ENSG00000028203.19	novel	3002	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.1009551313308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214191	True	NA	14	True	AATAAA	-18	NA	95217768	95301172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270187_95274738_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00022287	chr12	+	6444	12	NIC	ENSG00000028203.19	novel	2362	12	NA	NA	5	1892	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	109.139686065061	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTAAACGTATTGTT	95214191	True	NA	NA	False	AATAAA	-20	NA	95217768	95304691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95298861_95298944_95300164
WTC11_00022288	chr12	+	2987	13	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	100.140006158045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214194	True	NA	14	True	AATAAA	-18	NA	95217771	95301172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95224179_95224237_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00022291	chr12	+	2882	12	NIC	ENSG00000028203.19	novel	3942	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	92.0037728295749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95218152	True	NA	14	True	AATAAA	-18	NA	95218266	95301172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95218346_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
WTC11_00022295	chr12	+	945	2	Antisense	novelGene_ENSG00000074527.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAAACGGCCCCACCCC	95751051	False	NA	NA	False	NA	NA	NA	95751066	95754753	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_95751709_95754450
WTC11_00022297	chr12	+	3451	14	NIC	ENSG00000139350.12	novel	4015	16	NA	NA	0	-93	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	63.030564577877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGGAAACATGAAATTGA	96903455	True	NA	11	True	AATAAA	-16	NA	96907256	96953687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_96907301_96907603_96907625_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
WTC11_00022317	chr12	+	931	4	FSM	ENSG00000076555.16	ENST00000536440.2	959	4	0	28	0	-28	multi-exon	FALSE	canonical	2	5	junction_2	9.56846672960488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTAAAACATTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	109245713	109252550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109245749_109246178_109246449_109249983_109250105_109252045
WTC11_00022318	chr12	+	923	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	-6	-80	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	74.0322599290612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTTTAAATTTTAAGT	109475775	True	NA	8	True	ATTAAA	-19	NA	109477645	109490642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
WTC11_00022320	chr12	+	2621	10	FSM	ENSG00000110921.14	ENST00000539575.4	2747	10	0	126	0	-126	multi-exon	FALSE	canonical	3	96	junction_3	21.3124898175277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTGAAGGGAGGACG	109572730	False	NA	NA	False	NA	NA	NA	109574806	109597991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
WTC11_00022331	chr12	+	2951	18	FSM	ENSG00000111271.15	ENST00000413681.7	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	30.8623464607885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	111683183	True	NA	NA	False	AATAAA	-18	NA	111686067	111749132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
WTC11_00022332	chr12	+	3637	19	NIC	ENSG00000111271.15	novel	4006	21	NA	NA	0	-2	intron_retention	FALSE	canonical	3	12	junction_8	30.4763113836887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGCTTTGTGGACTTTC	111683197	True	NA	11	True	AGTAAA	-8	NA	111686081	111757092	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
WTC11_00022340	chr12	+	1058	9	FSM	ENSG00000135148.12	ENST00000552890.5	1043	9	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	84.9211950869746	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGATTCCCAGCCTCAA	112121746	True	NA	NA	False	NA	NA	NA	112125544	112149808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112140981_112142088_112142296_112145585_112145663_112148073_112148305_112149750
WTC11_00022342	chr12	+	1387	10	NIC	ENSG00000186815.13	novel	2558	27	NA	NA	-2376	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	38.4592136049492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTGCGATGTACGGAA	NA	False	NA	2	True	NA	NA	NA	113287672	113296124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_113288235_113288494_113288527_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
WTC11_00022354	chr12	+	670	1	FSM	ENSG00000088986.11	ENST00000552316.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120497802	False	NA	13	True	AATAAA	-16	NA	120497823	120498493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120497800_120498500
WTC11_00022356	chr12	+	760	5	FSM	ENSG00000022840.17	ENST00000535470.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	428.099506540244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATCTCTTCCTGCCAA	120565413	False	NA	15	True	AATAAA	-11	NA	120565435	120576882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
WTC11_00022358	chr12	+	2405	13	Fusion	ENSG00000175970.11_ENSG00000122971.9	novel	4381	5	NA	NA	8	0	multi-exon	FALSE	canonical	3	10	junction_4	27.3053718768548	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120703133	True	NA	10	True	AATAAA	-16	NA	120710465	120740008	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
WTC11_00022362	chr12	+	6790	63	NIC	ENSG00000184445.12	novel	6974	64	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_42	82.1129919338519	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAATTGCCCCATAAAGA	122523838	True	NA	2	True	AATAAA	-14	NA	122527270	122626375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158_122544270_122546175_122546270_122546621_122546675_122547414_122547531_122547914_122547970_122549765_122549865_122551318_122551363_122551457_122551524_122551620_122551697_122557383_122557510_122557599_122557690_122561920_122561975_122562637_122562700_122568260_122568373_122569680_122569825_122570875_122570933_122571024_122571127_122572936_122573057_122573141_122573286_122574281_122574381_122575542_122575647_122575799_122575900_122576894_122577030_122577671_122577792_122579904_122579978_122580602_122580671_122582704_122582986_122584277_122584451_122584892_122584991_122585635_122585775_122586700_122586758_122587710_122587875_122588711_122588817_122590606_122590736_122591336_122591454_122597730_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
WTC11_00022363	chr12	+	2724	10	NNC	ENSG00000139726.11	novel	2719	8	NA	NA	0	40792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	586.96736822248	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTAGGCCCCTTTAAGAG	122720352	True	NA	NA	False	NA	NA	NA	122752823	122811856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033_122769221_122769246_122771058_122811818
WTC11_00022367	chr12	+	1100	6	NIC	ENSG00000111325.16	novel	1780	7	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	60.8821813012642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACTTCTTGGCTCAAC	122973479	True	NA	2	True	AATAAA	-14	NA	122975233	122979432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122975384_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
WTC11_00022372	chr12	+	1124	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	741.239232636805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTCTCTGTTCTGTGG	122968683	True	NA	13	True	ATTAAA	-13	NA	122980717	122982905	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980888_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00022374	chr12	+	945	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	718.154579460439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980751	False	NA	17	True	ATTAAA	-17	NA	122980792	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980813_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00022375	chr12	+	1124	6	NIC	ENSG00000182196.14	novel	796	6	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	689.901152339957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980756	False	NA	17	True	ATTAAA	-17	NA	122980797	122982909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980988_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
WTC11_00022376	chr12	+	1140	2	FSM	ENSG00000184209.15	ENST00000412157.2	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTGAAGTTACAGTGG	123456974	False	NA	-76	True	NA	NA	NA	123459522	123466299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123459901_123465537
WTC11_00022385	chr12	+	2795	19	NIC	ENSG00000185344.15	novel	6507	20	NA	NA	10	-44	combination_of_known_splicesites	FALSE	canonical	2	14	junction_15	58.2149327497828	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTCATATGTTAAATAT	123708165	True	NA	-64	True	NA	NA	NA	123712365	123758176	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123752282_123752403_123754419_123754538_123756814_123756987_123757926
WTC11_00022388	chr12	+	991	4	Antisense	novelGene_ENSG00000150991.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACAAAAAAGCCAAAAACG	NA	False	NA	NA	False	NA	NA	NA	124911644	124913775	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_124911972_124912427_124912656_124913111_124913340_124913567
WTC11_00022389	chr12	+	2468	12	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	15	-17	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	54.2123160048671	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGCACATGCACCC	125060659	True	NA	-7	True	AATAAA	-6	NA	125065449	125143299	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125134002_125134073_125134793_125134853_125142091
WTC11_00022391	chr12	+	3017	17	NIC	ENSG00000061936.10	novel	3246	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	49.8569437866984	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131707420	True	NA	17	True	AATAAA	-29	NA	131711087	131799738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
WTC11_00022392	chr12	+	3173	18	NIC	ENSG00000061936.10	novel	3219	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_13	65.4009195410631	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131707420	True	NA	17	True	AATAAA	-29	NA	131711087	131799738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131766117_131766309_131778064_131778331_131785072_131785229_131786462_131786589_131797177_131797361_131799036_131799110_131799422
WTC11_00022396	chr12	+	2425	4	NIC	ENSG00000185684.16	novel	1994	6	NA	NA	2	6	intron_retention	FALSE	canonical	3	9	junction_1	16.3571255285137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTAACTTTTCTGCT	132082860	True	NA	16	True	ATTAAA	-23	NA	132084326	132108905	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132085317_132103996_132104171_132104377_132105305_132108571
WTC11_00022397	chr12	+	7624	8	NIC	ENSG00000185684.16	novel	2741	11	NA	NA	226	0	intron_retention	FALSE	canonical	2	3	junction_2	12.8364913509916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTCTCTTGTCTTT	NA	False	NA	NA	False	AATATA	-1	NA	132104246	132131639	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132105305_132108571_132108683_132114457_132114546_132120419_132120602_132121439_132121580_132121924_132121981_132125193_132125397_132125853
WTC11_00022400	chr12	+	621	3	NNC	ENSG00000176894.10	novel	632	3	NA	NA	-21	-10277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGTTTCTGAACCACT	132686452	True	NA	NA	False	AATAAA	-21	NA	132687620	132691407	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132687793_132690262_132690377_132691072
WTC11_00022406	chr12	-	1632	9	ISM	ENSG00000226210.3	ENST00000400706.3	1817	11	13482	-45	13482	45	3prime_fragment	TRUE	canonical	3	23	junction_1	51.0451699478021	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	NA	False	AATAAA	-21	NA	18533	14476	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372
WTC11_00022408	chr12	-	11606	29	NNC	ENSG00000073614.13	novel	10701	28	NA	NA	184	1203	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	13.4390156952488	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTATTCCTTTGTAAA	-388699	False	NA	NA	False	NA	NA	NA	389080	278853	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_281970_282027_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
WTC11_00022409	chr12	-	681	7	FSM	ENSG00000002016.18	ENST00000545564.5	681	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	8.78919791562347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACGCCAGGTATATC	NA	False	NA	NA	False	ACTAAA	-4	NA	933058	925462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_925526_926795_926947_927144_927264_929818_929887_930050_930145_931219_931322_932974
WTC11_00022411	chr12	-	468	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	33	0	33	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	-991050	True	NA	-23	True	NA	NA	NA	991157	976978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_977107_989808_990042_991050
WTC11_00022413	chr12	-	360	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	-35	-70	-35	70	mono-exon	FALSE	NA	NA	NA	NA	NA	952	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCAATTTTCCCTAAGA	NA	False	NA	NA	False	AATAAA	-29	NA	3211952	3211592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3211600_3212000
WTC11_00022414	chr12	-	217	1	FSM	ENSG00000280202.1	ENST00000624384.1	1697	1	1370	110	1370	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACATTTTGTGCCCAT	NA	False	NA	NA	False	NA	NA	NA	3610633	3610416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3610400_3610600
WTC11_00022415	chr12	-	4527	9	NIC	ENSG00000111224.14	novel	4406	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	17.5695048308141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871978	True	NA	-22	True	ATTAAA	-18	NA	3873355	3808860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
WTC11_00022416	chr12	-	2154	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	14	0	10	0	multi-exon	FALSE	canonical	2	4	junction_13	20.0056205120213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-4537560	True	NA	-63	True	ATTAAA	-14	NA	4538494	4489414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
WTC11_00022417	chr12	-	400	4	FSM	ENSG00000110799.14	ENST00000621700.1	556	4	47	109	47	-109	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCCTCTTTACTGTCT	NA	False	NA	NA	False	NA	NA	NA	5968167	5952376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_5952520_5953495_5953595_5967485_5967603_5968126
WTC11_00022419	chr12	-	973	5	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	1	0	multi-exon	FALSE	canonical	1	1	junction_1	19.615045245933	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAATATTTTATTTATT	-6469866	True	NA	57	True	AATAAA	-26	NA	6470652	6439164	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_6439677_6464889_6464942_6465841_6466001_6466224_6466352_6470529
WTC11_00022420	chr12	-	829	4	NIC	ENSG00000215039.8	novel	865	5	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	17.6823829464998	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGAGGTGCTATTG	-6451193	True	NA	NA	False	ATTAAA	-21	NA	6451583	6447622	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6448151_6448639_6448738_6450892_6450981_6451468
WTC11_00022421	chr12	-	1569	8	FSM	ENSG00000111642.16	ENST00000647112.1	1564	8	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_7	305.769954878046	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	-6580689	False	NA	-7	True	AATAAA	-18	NA	6580726	6570081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6580581
WTC11_00022429	chr12	-	2685	10	NNC	ENSG00000126746.18	novel	3266	10	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	81.5726594235599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6689075	False	NA	-13	True	TATAAA	-18	NA	6689086	6666737	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688993
WTC11_00022430	chr12	-	2956	12	NIC	ENSG00000126746.18	novel	3407	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	100.174228387634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATATTTGATGTTTT	-6687781	True	NA	-14	True	TATAAA	-17	NA	6689456	6666738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
WTC11_00022432	chr12	-	1247	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	79	1613	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	20.9914268214431	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCCCTCTTCCTAAAT	-6700708	False	NA	1	True	AATAAA	-35	NA	6700721	6692177	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
WTC11_00022433	chr12	-	614	3	FSM	ENSG00000139200.14	ENST00000545917.5	614	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGGTGAGTGGGAAA	-6699976	False	43	NA	False	NA	NA	NA	6699989	6697294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6697793_6698044_6698105_6699933
WTC11_00022434	chr12	-	1556	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	36223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTCATAAATACGTCAA	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6711772	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6711799_6747996_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00022435	chr12	-	1558	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6717875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717904_6747996_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00022436	chr12	-	1551	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.14263581456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-6732669	True	NA	NA	False	NA	NA	NA	6753117	6717875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717904_6748003_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
WTC11_00022437	chr12	-	1333	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAGAGGTAAATAAAGC	-6940451	True	NA	NA	False	NA	NA	NA	6970618	6913555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913585_6965355_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00022438	chr12	-	1332	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAGAGGTAAATAAAGC	-6940451	True	NA	NA	False	NA	NA	NA	6970618	6913555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913584_6965355_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00022439	chr12	-	1333	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	44609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	647.666237776492	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGCAAACCAG	-6940451	True	NA	NA	False	NA	NA	NA	6970618	6920717	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6920743_6965351_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
WTC11_00022440	chr12	-	1430	10	NIC	ENSG00000215021.10	novel	1379	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	717.822805605195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6940471	True	NA	-3	True	AATAAA	-21	NA	6970638	6965351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6965713_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6969955_6970064_6970195_6970281_6970416
WTC11_00022446	chr12	-	806	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	7	0	-7	multi-exon	FALSE	canonical	3	9	junction_2	3	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAATGATGACTCAGAT	-7108476	True	NA	-7	True	AGTAAA	-10	NA	7109210	7101611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7102088_7108250_7108480_7109109
WTC11_00022447	chr12	-	532	3	FSM	ENSG00000139194.8	ENST00000542784.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCCCTTCAAGCCCAGA	-7128484	False	NA	NA	False	NA	NA	NA	7128561	7124066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7124175_7124628_7124731_7128239
WTC11_00022448	chr12	-	2638	1	FSM	ENSG00000255836.1	ENST00000538078.1	1211	1	-330	-1097	-330	1097	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATGAGT	-7440218	False	NA	NA	False	AATAAA	-17	NA	7440320	7437682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7437700_7440300
WTC11_00022450	chr12	-	508	1	FSM	ENSG00000255581.1	ENST00000388966.4	660	1	13	139	13	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGGATGCTGT	-8017824	False	NA	NA	False	AATAAA	-10	NA	8017847	8017339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8017300_8017800
WTC11_00022451	chr12	-	1673	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	52	58	52	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTGTCACTGAATACA	-8082022	True	NA	NA	False	NA	NA	NA	8082111	8080438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8080400_8082100
WTC11_00022452	chr12	-	490	3	NIC	ENSG00000226091.7	novel	447	3	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTGGCTCCTGGATGC	-8389488	False	NA	-2	True	TATAAA	-21	NA	8390365	8356964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_8357142_8370212_8370430_8390269
WTC11_00022453	chr12	-	817	1	FSM	ENSG00000212440.1	ENST00000391138.1	150	1	16	-683	16	683	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCAAGTAAAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	9286806	9285989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_9286000_9286800
WTC11_00022454	chr12	-	1936	12	NNC	ENSG00000256673.1	novel	400	4	NA	NA	1023	1287	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	16.2653614614331	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGAGTCTATGAC	-9413808	False	NA	-11	True	ATTAAA	-10	NA	9413828	9397067	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9397215_9397614_9397690_9398381_9398485_9399794_9399864_9400235_9400327_9401746_9401860_9402426_9402554_9406307_9406399_9407307_9407453_9408855_9408950_9412071_9412250_9413125
WTC11_00022455	chr12	-	710	4	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21319	64772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.5106808355492	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAACATTTAAAAATAGAA	-9910698	True	NA	NA	False	AATAAA	-41	NA	9911028	9833900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9833924_9898675_9898977_9900827_9900876_9910690
WTC11_00022456	chr12	-	744	2	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21319	102	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGCTCACCACACAGA	-9910698	True	NA	87	True	AATAAA	-34	NA	9911028	9898570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9898977_9910690
WTC11_00022458	chr12	-	1944	11	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	30549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.22624527579	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGTGACAGGTG	-10723293	False	NA	NA	False	AGTAAA	-33	NA	10723307	10668539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668567_10699086_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
WTC11_00022462	chr12	-	1618	10	FSM	ENSG00000275778.2	ENST00000536668.2	1618	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	24.0508720100633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171598	10845848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10845951_10847044_10847368_10848371_10848408_10882216_10882699_10883060_10883097_10884153_10884276_10973654_10973722_11034781_11034886_11047019_11047189_11171421
WTC11_00022463	chr12	-	1527	1	FSM	ENSG00000212127.6	ENST00000537503.2	1854	1	312	15	312	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGTTAAAAACTATCAAA	NA	False	NA	NA	False	AATAAA	-3	NA	10938951	10937424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10937400_10939000
WTC11_00022464	chr12	-	225	1	FSM	ENSG00000212125.2	ENST00000390674.2	928	1	758	-55	758	55	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAACATTTTATACTTT	NA	False	NA	NA	False	AAAACA	-12	NA	10964594	10964369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10964400_10964600
WTC11_00022465	chr12	-	200	1	FSM	ENSG00000212126.3	ENST00000506868.1	1000	1	803	-3	803	3	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTCTAGGAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	10986109	10985909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10985900_10986100
WTC11_00022466	chr12	-	2349	1	FSM	ENSG00000255837.2	ENST00000538986.2	2344	1	-8	3	-8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTAGTGTACATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	10998312	10995963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10996000_10998300
WTC11_00022467	chr12	-	1027	1	FSM	ENSG00000255374.3	ENST00000531678.1	1027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTGTATCTTCTAGCA	NA	False	NA	NA	False	NA	NA	NA	11092313	11091286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11091300_11092300
WTC11_00022468	chr12	-	1283	4	FSM	ENSG00000197870.13	ENST00000538488.3	1227	4	-98	42	-98	-32	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTTTAATATACCAATAAA	NA	False	NA	-41	True	NA	NA	NA	11269805	11265955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11266030_11267175_11268149_11268632_11268669_11269605
WTC11_00022469	chr12	-	8559	16	NNC	ENSG00000070018.9	novel	7812	24	NA	NA	-29686	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	37.8784019374278	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	-12164896	False	NA	NA	False	NA	NA	NA	12164914	12110419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110450_12116028_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
WTC11_00022470	chr12	-	1191	5	NNC	ENSG00000013583.10	novel	1159	4	NA	NA	0	43061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.951670858378	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTCGCTATAGTGCTG	-12995043	True	NA	NA	False	AAAAAG	-41	NA	13000265	12931808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12931835_12974863_12975480_12987151_12987333_12989276_12989416_13000036
WTC11_00022471	chr12	-	1183	5	NNC	ENSG00000013583.10	novel	1159	4	NA	NA	0	43061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.951670858378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTCGCTATAGTGCTG	-12995043	True	NA	NA	False	AAAAAG	-41	NA	13000265	12931808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12931837_12974873_12975480_12987151_12987333_12989276_12989416_13000036
WTC11_00022472	chr12	-	495	2	FSM	ENSG00000180861.9	ENST00000527705.2	632	2	137	0	137	0	multi-exon	FALSE	canonical	1	2	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAACTCATGCTCAAA	NA	False	NA	NA	False	NA	NA	NA	13376293	13373013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_13373439_13376223
WTC11_00022474	chr12	-	581	4	FSM	ENSG00000111348.9	ENST00000539131.1	590	4	9	0	9	0	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCCTAGAACAAGAGG	-14948849	True	NA	NA	False	NA	NA	NA	14948887	14942369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14948799
WTC11_00022475	chr12	-	1954	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	12	298	1	-264	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAATAAATGTGTCTAA	-15221322	True	NA	NA	False	ATTAAA	-10	NA	15221405	15108080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
WTC11_00022476	chr12	-	3332	4	NIC	ENSG00000048540.16	novel	3810	4	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	60.184900284226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTACATTTGGATTTA	-16604948	False	515	-7	True	AATAAA	-24	NA	16605007	16548419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_16551328_16560412_16560539_16600713_16600869_16604864
WTC11_00022479	chr12	-	885	1	FSM	ENSG00000245205.3	ENST00000359165.5	1405	1	-24	544	-24	-544	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAACATTAAAACTGAAGT	NA	False	NA	NA	False	NA	NA	NA	19457672	19456787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19456800_19457700
WTC11_00022480	chr12	-	3716	16	NIC	ENSG00000084453.17	novel	7682	16	NA	NA	0	1181	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	7.36478105580879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTACAGATGCTTTAC	-21394953	True	NA	NA	False	NA	NA	NA	21395397	21268156	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21269768_21274468_21274587_21275359_21275425_21292163_21292337_21293944_21294111_21295596_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21334587_21334705_21374398_21374526_21395269
WTC11_00022482	chr12	-	3574	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	3	25	junction_15	77.3892326705294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496066	True	NA	2	True	AATAAA	-26	NA	21501551	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501373_21501462
WTC11_00022483	chr12	-	3465	15	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	76.9029337833726	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496110	True	NA	2	True	AATAAA	-26	NA	21501595	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
WTC11_00022484	chr12	-	3501	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	74.4469982978196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTATATTTTTC	-21496150	True	NA	2	True	AATAAA	-26	NA	21501635	21468906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
WTC11_00022485	chr12	-	1996	4	FSM	ENSG00000111728.11	ENST00000261197.7	1996	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.44948974278318	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTTGTTGAGCCACG	-22334703	False	NA	NA	False	AATAAA	-25	NA	22334714	22200998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22202039_22249005_22249099_22287148_22287294_22333996
WTC11_00022487	chr12	-	7957	12	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	0	7669	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	251.07007352168	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATATTTTATCT	-24933055	True	NA	NA	False	NA	NA	NA	24949043	24802354	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_24802393_24811360_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
WTC11_00022488	chr12	-	639	1	FSM	ENSG00000278743.1	ENST00000622671.1	572	1	70	-137	70	137	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-25385578	True	NA	NA	False	NA	NA	NA	25386171	25385532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25385500_25386200
WTC11_00022489	chr12	-	1583	6	FSM	ENSG00000246695.9	ENST00000665934.1	1583	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20.3666393889615	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTCTGTCTCAAAA	-25958159	False	NA	NA	False	NA	NA	NA	25958195	25945181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25946136_25947518_25947623_25955137_25955242_25956226_25956348_25956638_25956762_25958018
WTC11_00022490	chr12	-	3220	4	FSM	ENSG00000246695.9	ENST00000669929.1	3321	4	0	101	0	-101	multi-exon	FALSE	canonical	1	1	junction_3	22.6617641757114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGGCCAAGGTGGGC	-25958212	False	NA	NA	False	NA	NA	NA	25958248	25952641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25957875
WTC11_00022491	chr12	-	1104	3	NIC	ENSG00000246695.9	novel	3560	4	NA	NA	6	27	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATAAGATTCTTTATTA	-25958091	True	NA	-121	True	AATAAA	-18	NA	25958535	25954777	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_25955242_25956638_25956762_25958018
WTC11_00022492	chr12	-	1787	4	NIC	ENSG00000246695.9	novel	3321	4	NA	NA	12	26	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	21.3593591248011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATAAGATTCTTTATT	-25958085	True	NA	-122	True	AATAAA	-17	NA	25958529	25954778	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_25955242_25956226_25956348_25956638_25956765_25957452
WTC11_00022493	chr12	-	350	2	FSM	ENSG00000123095.6	ENST00000394326.2	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAGGCACCGGCGCTC	-26123743	False	NA	NA	False	NA	NA	NA	26123768	26122957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26123169_26123629
WTC11_00022494	chr12	-	347	3	FSM	ENSG00000123104.12	ENST00000536627.1	569	3	222	0	222	0	multi-exon	FALSE	canonical	3	30	junction_2	1.5	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCATCCGTTCTGGAAA	NA	False	NA	NA	False	AATGAA	-14	NA	26725791	26722437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26722556_26724655_26724743_26725649
WTC11_00022496	chr12	-	1818	1	FSM	ENSG00000247934.4	ENST00000617468.1	2409	1	601	-10	229	10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTTCTTTCACTTA	-28190105	False	NA	16	True	TATAAA	-28	NA	28190137	28188319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_28188300_28190100
WTC11_00022497	chr12	-	314	1	FSM	ENSG00000274315.1	ENST00000616916.1	503	1	14	175	14	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGAAAAAATAGTTTTG	-29331911	False	NA	NA	False	TATAAA	-45	NA	29331922	29331608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29331600_29331900
WTC11_00022498	chr12	-	377	1	FSM	ENSG00000273680.1	ENST00000610917.1	651	1	61	213	61	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTCATAAAAATGGGGTA	-29333300	False	NA	NA	False	TTTAAA	-11	NA	29333322	29332945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29332900_29333300
WTC11_00022499	chr12	-	3740	19	NIC	ENSG00000110888.18	novel	3619	19	NA	NA	0	38	combination_of_known_junctions	FALSE	canonical	3	15	junction_18	58.7447922567094	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATATCTGCTTTTTAA	-30750132	True	NA	34	True	ATTAAA	-15	NA	30754860	30709513	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754688
WTC11_00022500	chr12	-	4997	17	NIC	ENSG00000110888.18	novel	3619	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_16	40.6632512226949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGTGTTCCTATTTA	-30750211	True	NA	-6	True	AATAAA	-13	NA	30754939	30709553	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
WTC11_00022501	chr12	-	3717	19	NIC	ENSG00000110888.18	novel	3619	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	54.3294704375507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGTGTTCCTATTTA	-30750211	True	NA	-6	True	AATAAA	-13	NA	30754939	30709553	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
WTC11_00022502	chr12	-	3491	16	NIC	ENSG00000110888.18	novel	3606	19	NA	NA	-157	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_5	59.7039362186447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTCAGTGTTCCTATTT	-30753806	False	NA	-7	True	AATAAA	-12	NA	30753816	30709554	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715082_30716507_30716677_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343
WTC11_00022503	chr12	-	6177	16	NIC	ENSG00000110888.18	novel	3535	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	56	junction_1	41.592734408254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTTCAGTGTTCCTA	-30750160	True	NA	-10	True	AATAAA	-9	NA	30754888	30709557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343
WTC11_00022505	chr12	-	647	1	FSM	ENSG00000226472.8	ENST00000612219.1	629	1	-40	22	-40	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACATGCCATATGCCA	NA	False	NA	-39	True	NA	NA	NA	30978976	30978329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30978300_30979000
WTC11_00022506	chr12	-	327	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	474	9	448	-9	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCCACCTATCTTCCT	-31073125	False	NA	NA	False	ATTAAA	-15	NA	31073338	31060587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31060771_31073194
WTC11_00022508	chr12	-	420	1	FSM	ENSG00000225349.2	ENST00000452932.2	533	1	175	-62	175	62	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCCATAAGACAAAGTTG	NA	False	NA	NA	False	TATAAA	-3	NA	31535072	31534652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31534700_31535100
WTC11_00022509	chr12	-	900	1	FSM	ENSG00000275854.1	ENST00000620106.1	731	1	-214	45	-214	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTATCATATTTTAAAA	-32737860	False	NA	-42	True	NA	NA	NA	32737874	32736974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32737000_32737900
WTC11_00022510	chr12	-	378	1	FSM	ENSG00000273853.1	ENST00000614876.1	543	1	-160	325	-160	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGATTTATAGGACT	-33433002	False	NA	NA	False	NA	NA	NA	33433013	33432635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33432600_33433000
WTC11_00022511	chr12	-	1036	5	FSM	ENSG00000139117.14	ENST00000546603.5	1036	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.56637297521078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGACAAACACAATTGCA	NA	False	NA	NA	False	NA	NA	NA	38679678	38653370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38679577
WTC11_00022512	chr12	-	549	8	FSM	ENSG00000139117.14	ENST00000550863.1	549	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	5.46230122694433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGAAAATCAGATCC	-38906061	False	NA	NA	False	NA	NA	NA	38906269	38767690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38906141
WTC11_00022513	chr12	-	485	3	FSM	ENSG00000139168.9	ENST00000678390.1	2043	3	0	1558	0	-1558	multi-exon	FALSE	canonical	3	540	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACAATTTTCTTTTCTT	-42321227	True	NA	NA	False	CATAAA	-34	NA	42326096	42322220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42322447_42324018_42324105_42325923
WTC11_00022514	chr12	-	4218	9	NNC	ENSG00000139174.12	novel	4277	9	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	20.1804360706106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAGGGAGGCATTTAAT	-42484186	False	NA	-74	True	ACTAAA	-21	NA	42484214	42458396	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757_42483986_42484180
WTC11_00022515	chr12	-	3778	9	FSM	ENSG00000139174.12	ENST00000640055.1	3778	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	22.8879744625862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATATATGGTAAAAACA	-42483531	True	NA	-35	True	TATAAA	-33	NA	42484298	42458824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42483757_42483986_42484273
WTC11_00022516	chr12	-	7526	39	NNC	ENSG00000173157.18	novel	6358	39	NA	NA	-65	1100	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_30	4.94855808764679	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCACTTTGTTTTTATTG	-43551020	True	NA	-3	True	AATAAA	-18	NA	43552268	43352765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_43354299_43356483_43356589_43369289_43369382_43375378_43375513_43376056_43376149_43376235_43376331_43376523_43376654_43377364_43377563_43383557_43383729_43383803_43383978_43399065_43399234_43425513_43425691_43427307_43427470_43428240_43428532_43428634_43428800_43429616_43429725_43430351_43430472_43431331_43431497_43432303_43432469_43432600_43432812_43434244_43434372_43439621_43439752_43439896_43440070_43443790_43443884_43446594_43446713_43452273_43452411_43452513_43452696_43453906_43454053_43462894_43463003_43464590_43464733_43466651_43466796_43468599_43468706_43490394_43490436_43492504_43492630_43493169_43493254_43502151_43502406_43532035_43532196_43550908_43551271_43551830
WTC11_00022517	chr12	-	3165	20	FSM	ENSG00000184613.11	ENST00000395487.6	3203	20	38	0	38	0	multi-exon	FALSE	canonical	1	7	junction_19	53.004520791879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTCTGAGTATCTTG	-44875601	False	119	-5	True	AATAAA	-23	NA	44875616	44508274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875506
WTC11_00022518	chr12	-	1745	1	FSM	ENSG00000134297.7	ENST00000336399.5	1524	1	0	-221	0	78	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAATTACCCAAAGCGT	NA	False	NA	NA	False	NA	NA	NA	45174713	45172968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45173000_45174700
WTC11_00022520	chr12	-	6410	1	FSM	ENSG00000273015.2	ENST00000609803.2	9730	1	-48	3368	-48	-3368	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAAGGGCGTATTTGA	-45727807	False	NA	NA	False	NA	NA	NA	45727823	45721413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45721400_45727800
WTC11_00022521	chr12	-	540	3	NNC	ENSG00000111371.16	novel	543	2	NA	NA	24	417	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	306.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTTTTATTATTTGA	-46197898	True	NA	0	True	ATTAAA	-20	NA	46197997	46196960	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_46197324_46197719_46197818_46197918
WTC11_00022525	chr12	-	3833	16	ISM	ENSG00000139209.16	ENST00000266579.9	3983	17	22257	1	22245	-1	3prime_fragment	FALSE	canonical	3	20	junction_15	12.5031551573548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATGTGATTTTTGATC	NA	False	NA	-27	True	AATAAA	-17	NA	46803740	46764761	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46803602
WTC11_00022531	chr12	-	770	1	FSM	ENSG00000276814.1	ENST00000616571.1	978	1	-281	489	-281	-489	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTGCTTTGACTGGAA	-48041031	False	NA	-18	True	AATAAA	-13	NA	48041042	48040272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48040300_48041000
WTC11_00022532	chr12	-	591	5	FSM	ENSG00000177981.11	ENST00000535055.5	657	5	66	0	-5	0	multi-exon	FALSE	canonical	2	2	junction_1	10.256095748383	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACAACAATGATACACC	-48156758	True	NA	NA	False	NA	NA	NA	48157525	48149791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48149999_48150086_48150141_48151200_48151306_48153367_48153526_48157458
WTC11_00022533	chr12	-	2438	12	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	-76	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	92.5809897841964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATTTTGGTTTTGCTT	-48678558	True	NA	-11	True	AATAAA	-9	NA	48682236	48653286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660621_48661196_48661244_48662559_48662655_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
WTC11_00022538	chr12	-	779	7	FSM	ENSG00000174243.10	ENST00000553182.5	779	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	73.3070028487502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACCCCCTGTGAGTGGC	-48847392	True	NA	NA	False	NA	NA	NA	48852141	48837291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48837394_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
WTC11_00022540	chr12	-	2663	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	-2	0	0	multi-exon	FALSE	canonical	3	420	junction_3	38.4736562107401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48920984	True	NA	-12	True	AATAAA	-22	NA	48925510	48921958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
WTC11_00022543	chr12	-	3461	6	NNC	ENSG00000134287.10	novel	807	6	NA	NA	13	3461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	383.206993673132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-48923580	True	NA	NA	False	AAGAAA	-27	NA	48957365	48932261	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48932290_48936208_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
WTC11_00022544	chr12	-	3557	6	NNC	ENSG00000134287.10	novel	807	6	NA	NA	0	3461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	383.206993673132	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-48923677	True	NA	NA	False	AAGAAA	-27	NA	48957462	48932261	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48932289_48936208_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
WTC11_00022548	chr12	-	553	7	FSM	ENSG00000181929.13	ENST00000548857.5	553	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	163.621514477773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGAGAGGTATGTAGA	-49015377	True	NA	NA	False	NA	NA	NA	49018775	49005130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49008425_49008600_49013061_49013111_49018731
WTC11_00022550	chr12	-	1602	6	ISM	ENSG00000139636.16	ENST00000547382.5	2235	17	9301	-592	0	586	3prime_fragment	TRUE	canonical	3	28	junction_5	35.7636687156114	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGGGTGCTTTTTTTTTC	-49099368	False	NA	-1	True	AATAAA	-17	NA	49101549	49096549	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471
WTC11_00022551	chr12	-	2334	18	FSM	ENSG00000139636.16	ENST00000417750.5	2334	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.4533182998171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTGTGTATATTTG	-49108500	False	2181	-2	True	AATAAA	-36	NA	49110681	49097135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106544_49106747_49106960_49107046_49110483
WTC11_00022552	chr12	-	806	1	FSM	ENSG00000257464.1	ENST00000549563.1	229	1	-121	-456	-121	456	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCTCCCTGTCAGAAT	NA	False	NA	NA	False	AAGAAA	-14	NA	49442773	49441967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49442000_49442800
WTC11_00022553	chr12	-	326	4	FSM	ENSG00000161791.14	ENST00000550970.1	557	4	0	231	0	-231	multi-exon	FALSE	canonical	3	18	junction_2	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCACCCCGGGGCT	NA	False	NA	NA	False	NA	NA	NA	49668554	49661965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49662050_49665831_49665909_49666126_49666208_49668470
WTC11_00022555	chr12	-	415	4	FSM	ENSG00000161800.13	ENST00000548158.1	596	4	0	181	0	-181	multi-exon	FALSE	canonical	3	272	junction_2	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGACCAGAGAACTGCTT	-50004245	False	NA	NA	False	NA	NA	NA	50004271	49999490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49999734_50001171_50001253_50002246_50002301_50004234
WTC11_00022561	chr12	-	5516	13	NIC	ENSG00000139629.16	novel	5307	12	NA	NA	338	-14	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	8.92406235348504	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAATCCAGGCTGAT	-51390523	False	NA	NA	False	TATAAA	-3	NA	51390961	51351265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51360720_51360839_51364120_51364356_51365429_51365580_51377194_51377368_51379290_51379885_51382312_51382510_51383460_51383583_51390849
WTC11_00022564	chr12	-	546	1	FSM	ENSG00000257851.2	ENST00000547726.2	1138	1	480	112	480	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATTATGGACCCATG	NA	False	NA	NA	False	NA	NA	NA	51713126	51712580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51712600_51713100
WTC11_00022565	chr12	-	257	1	FSM	ENSG00000284730.2	ENST00000642069.2	1005	1	153	595	153	-595	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGACCGCCTGGCTCGGGC	-51814724	False	NA	NA	False	NA	NA	NA	51814772	51814515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51814500_51814800
WTC11_00022566	chr12	-	1817	9	NNC	ENSG00000170421.13	novel	1882	9	NA	NA	-2	5753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	986.136455758025	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTAGGTTCATAG	-52887842	True	NA	NA	False	AAAAAG	-8	NA	52905078	52891433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52891466_52897191_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657
WTC11_00022567	chr12	-	1784	8	NNC	ENSG00000170421.13	novel	1784	8	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_4	1041.20599228363	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTGTGTGCATC	-52887841	True	NA	-6	True	AATAAA	-23	NA	52905077	52897188	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900063_52900587_52900684_52901158_52901220_52901863_52902073_52904657
WTC11_00022568	chr12	-	1755	9	FSM	ENSG00000170421.13	ENST00000546897.5	1755	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	983.832271019812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCTTGCCCATGC	-52948548	True	NA	-98	True	NA	NA	NA	52949824	52897280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949714
WTC11_00022570	chr12	-	1398	5	ISM	ENSG00000139631.20	ENST00000267085.8	2645	17	19800	0	9580	0	3prime_fragment	FALSE	canonical	2	6	junction_4	1.08972473588517	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGGTATGTTTTTAA	NA	False	NA	1	True	AATAAA	-19	NA	53160796	53157662	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_53158685_53159622_53159713_53159886_53159939_53160119_53160320_53160762
WTC11_00022571	chr12	-	2806	16	FSM	ENSG00000139626.16	ENST00000267082.10	2806	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCTGTCACTTTGCTT	-53207192	False	NA	-4	True	AATAAA	-14	NA	53207251	53191322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53191637_53191858_53192020_53192329_53192539_53192690_53192911_53193139_53193364_53193707_53193902_53194197_53194345_53195373_53195464_53195625_53195722_53196040_53196200_53196578_53196821_53197492_53197664_53197749_53197952_53200242_53200447_53201071_53201195_53207201
WTC11_00022573	chr12	-	1801	17	NNC	ENSG00000094914.14	novel	1815	16	NA	NA	0	33619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.63031612536	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAACCAAGAACCCAG	-53316721	True	NA	NA	False	NA	NA	NA	53321563	53273836	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53273866_53307455_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
WTC11_00022578	chr12	-	691	2	NIC	ENSG00000260492.3	novel	1390	3	NA	NA	43	2	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAGACAGCATCTCAA	-53755889	True	NA	-8	True	AATAAA	-18	NA	53756005	53746343	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53746849_53755819
WTC11_00022584	chr12	-	11569	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	0	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.589631026741	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54239718	True	NA	NA	False	AAAAAG	-2	NA	54280122	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224206_54230945_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00022585	chr12	-	11568	6	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	0	6763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.589631026741	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGCCTCCCTATGTTG	-54239718	True	NA	NA	False	AAAAAG	-2	NA	54280122	54224178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224205_54230945_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
WTC11_00022586	chr12	-	482	3	NNC	ENSG00000094916.16	novel	2627	2	NA	NA	12	-1714	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	28	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTCTCCAATCCTATC	-54239706	True	NA	NA	False	AAGAAA	-20	NA	54280110	54273554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54273864_54274239_54274310_54280007
WTC11_00022587	chr12	-	352	3	FSM	ENSG00000161638.11	ENST00000552431.5	588	3	155	81	155	14	multi-exon	FALSE	canonical	3	96	junction_2	0.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGACTTGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	54399758	54397351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54397488_54398596_54398699_54399644
WTC11_00022588	chr12	-	249	3	FSM	ENSG00000161638.11	ENST00000551564.1	354	3	105	0	105	0	multi-exon	FALSE	canonical	3	91	junction_2	8	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGACTACTTTGCC	NA	False	NA	NA	False	NA	NA	NA	54403067	54402080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54402094_54402179_54402331_54402982
WTC11_00022590	chr12	-	1323	4	ISM	ENSG00000135392.19	ENST00000678005.2	3256	7	5484	1178	5484	-412	intron_retention	FALSE	canonical	3	221	junction_2	21.853044537445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGGATTTCTTGAG	-55824090	False	NA	NA	False	NA	NA	NA	55824103	55822162	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069
WTC11_00022592	chr12	-	1985	12	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	184	junction_6	124.916765676619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	-55965979	False	NA	-7	True	AATAAA	-16	NA	55966026	55954103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
WTC11_00022593	chr12	-	343	1	FSM	ENSG00000273890.1	ENST00000615146.1	484	1	-37	178	-37	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCCATAACTCTTCTAA	NA	False	NA	NA	False	GATAAA	-30	NA	56010611	56010268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56010300_56010600
WTC11_00022594	chr12	-	828	3	FSM	ENSG00000139645.11	ENST00000680026.1	2520	3	0	1692	0	-1475	multi-exon	FALSE	canonical	3	32	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCACCCCCACCTTCTA	-56256755	True	NA	NA	False	NA	NA	NA	56258370	56257014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56257086_56257282_56257912_56258242
WTC11_00022596	chr12	-	2394	15	NIC	ENSG00000135473.16	novel	4523	26	NA	NA	43	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	29.4999135246052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGAGAACTGCTAGTG	-56323077	False	NA	-9	True	AATAAA	-26	NA	56324351	56316938	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324183_56324293
WTC11_00022601	chr12	-	4425	25	NNC	ENSG00000170581.14	novel	4405	24	NA	NA	0	761	intron_retention	TRUE	non_canonical	0	0	junction_1	20.8959060317778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTCCAATTGTCCTTTG	-56357380	True	NA	NA	False	NA	NA	NA	56360100	56340835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56340866_56341599_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
WTC11_00022602	chr12	-	4404	30	NNC	ENSG00000111602.12	novel	5158	29	NA	NA	0	75527	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.936378523507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTCCAATTGTCCTTTG	-56438781	True	NA	NA	False	NA	NA	NA	56449403	56340835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56340865_56417122_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
WTC11_00022604	chr12	-	627	1	FSM	ENSG00000252206.1	ENST00000516397.1	64	1	-589	26	-589	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTTTTTGCCAGAAACC	-56353013	False	NA	NA	False	NA	NA	NA	56353039	56352412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56352400_56353000
WTC11_00022605	chr12	-	567	6	FSM	ENSG00000135423.13	ENST00000461077.1	567	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	31.24483957392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGAAGGTAACCAGAA	-56487382	True	NA	NA	False	NA	NA	NA	56488132	56475053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56475111_56475623_56475683_56475944_56475978_56479779_56479902_56480287_56480388_56487936
WTC11_00022609	chr12	-	1783	11	NNC	ENSG00000110955.9	novel	1759	10	NA	NA	0	29307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.12634352332	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCACGGTGGCTCACG	-56550394	True	NA	NA	False	NA	NA	NA	56645984	56608867	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56608893_56638175_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
WTC11_00022611	chr12	-	845	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4623.6874286115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGTGACTGGTCTCTTCC	-56633120	True	NA	-4	True	AATAAA	-28	NA	56725286	56712426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
WTC11_00022612	chr12	-	1074	8	FSM	ENSG00000196531.14	ENST00000552540.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3843.87445907679	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633090	True	NA	-12	True	AATAAA	-20	NA	56725256	56712434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56724961
WTC11_00022613	chr12	-	449	6	FSM	ENSG00000196531.14	ENST00000551775.5	449	6	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_2	4278.17828520505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATACTAGGAAATCTTT	-56633138	True	NA	21	True	AAGAAA	-43	NA	56725304	56713063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56713191_56713536_56713590_56714370_56714440_56714601_56714688_56724451_56724524_56725262
WTC11_00022614	chr12	-	1432	13	NNC	ENSG00000198056.15	novel	1423	13	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	106.048992870696	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTATGTTGAAAAGAT	-56744943	True	NA	28	True	AGTAAA	-14	NA	56752339	56731583	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741835_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
WTC11_00022615	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4926291781761	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015871	True	NA	2	True	AATAAA	-18	NA	57016538	57009999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
WTC11_00022616	chr12	-	3250	22	NIC	ENSG00000166888.12	novel	3119	22	NA	NA	7	25	combination_of_known_junctions	FALSE	canonical	1	4	junction_19	39.0879582573153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTAGGACGGATAGGC	-57110254	False	2616	NA	False	NA	NA	NA	57110282	57096174	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107658_57107744_57108162_57108300_57109940
WTC11_00022617	chr12	-	205	1	FSM	ENSG00000276727.1	ENST00000617433.1	701	1	36	460	36	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCCAGTTACACGTCCG	-57230081	False	NA	NA	False	NA	NA	NA	57230162	57229957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57230000_57230200
WTC11_00022618	chr12	-	1587	11	FSM	ENSG00000185482.8	ENST00000554578.5	1580	11	-11	4	-7	1	multi-exon	TRUE	canonical	0	0	junction_10	2.33238075793812	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGTTATTTAACTGG	-57251184	False	NA	-4	True	ATTAAA	-18	NA	57251195	57243456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57243911_57244087_57244226_57244314_57244367_57244536_57244623_57244915_57244966_57245144_57245212_57246803_57246902_57248125_57248199_57248705_57248804_57249040_57249309_57250992
WTC11_00022622	chr12	-	360	2	FSM	ENSG00000135454.14	ENST00000551925.1	1003	2	547	96	514	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCCAGGCCTTTCTGT	-57632059	False	NA	NA	False	NA	NA	NA	57632133	57631223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57631365_57631914
WTC11_00022623	chr12	-	1380	7	NIC	ENSG00000037897.17	novel	1378	6	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	109.822584198333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACATGCCTATTCTGCC	-57768283	True	NA	-30	True	NA	NA	NA	57772099	57768588	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771479_57771606_57771973
WTC11_00022625	chr12	-	1848	1	FSM	ENSG00000206749.1	ENST00000384022.1	107	1	-1745	4	-1745	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57808005	57806157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57806200_57808000
WTC11_00022626	chr12	-	4815	9	NNC	ENSG00000175215.11	novel	4785	8	NA	NA	0	1744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.68095235463	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCATGGTGGTGCACA	-57841223	True	NA	NA	False	NA	NA	NA	57846729	57818182	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_57818215_57819928_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
WTC11_00022627	chr12	-	4649	7	NIC	ENSG00000175215.11	novel	4785	8	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	114.225532269376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAGCTGCCACCAACC	-57841191	True	NA	-6	True	AATAAA	-26	NA	57846697	57819928	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57827551_57827591_57829447_57829597_57846371
WTC11_00022629	chr12	-	1706	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGTGTATGCAATA	-59320949	False	NA	-2	True	AATAAA	-22	NA	59320959	59319253	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_59319300_59321000
WTC11_00022630	chr12	-	720	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTTGTTTGTTATC	-59326823	False	NA	20	True	AATAAA	-42	NA	59326833	59321894	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_59322184_59326402
WTC11_00022634	chr12	-	2081	1	FSM	ENSG00000221949.6	ENST00000408887.3	1940	1	-154	13	-154	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAACTGGCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-3	NA	62603844	62601763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_62601800_62603800
WTC11_00022635	chr12	-	2696	4	NNC	ENSG00000174206.13	novel	2698	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.5673676969177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGATGTAAGTGTTT	-64221168	True	NA	NA	False	ATTAAA	-13	NA	64222257	64186317	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_64187653_64193838_64194659_64215677_64215964_64222002
WTC11_00022638	chr12	-	699	4	FSM	ENSG00000185306.13	ENST00000541802.1	716	4	17	0	17	0	multi-exon	FALSE	canonical	3	18	junction_2	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGAGGGGTCTTTCAGC	-64285876	False	NA	NA	False	NA	NA	NA	64286060	64270684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64270715_64274900_64275373_64284663_64284754_64285953
WTC11_00022639	chr12	-	553	5	FSM	ENSG00000185306.13	ENST00000543259.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATCTGAACTTTTTC	-64389970	False	NA	NA	False	NA	NA	NA	64390526	64303749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64303780_64312678_64312753_64330959_64331033_64352893_64353057_64390313
WTC11_00022640	chr12	-	4828	13	FSM	ENSG00000135677.11	ENST00000418919.6	4877	13	48	1	48	-1	multi-exon	FALSE	canonical	3	143	junction_8	11.8286375659527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCCTTTGTTTTA	-64748523	False	NA	-2	True	ATTAAA	-20	NA	64752823	64713445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658_64745725_64747711_64747919_64752697
WTC11_00022641	chr12	-	1461	11	FSM	ENSG00000135677.11	ENST00000541781.5	1846	11	385	0	385	0	multi-exon	FALSE	canonical	3	143	junction_8	11.9937483715476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACCCAGTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	64745853	64716608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658
WTC11_00022642	chr12	-	6911	4	NNC	ENSG00000139233.7	novel	7728	3	NA	NA	0	58969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	326.779232306257	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTCCACTCAGGCCATT	-66121732	True	NA	NA	False	NA	NA	NA	66130750	66057585	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_66057680_66117465_66124019_66128895_66129114_66130704
WTC11_00022643	chr12	-	2240	7	FSM	ENSG00000155957.19	ENST00000544599.5	2240	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	236.193952787393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTATGGTTTCATTTG	-66164191	False	NA	-2	True	ATTAAA	-15	NA	66169511	66136936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914
WTC11_00022644	chr12	-	8676	23	NIC	ENSG00000155974.13	novel	5147	25	NA	NA	-716	2350	combination_of_known_junctions	FALSE	canonical	2	15	junction_21	7.55762982654227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAACTTTTAGCTAAAC	-67069108	True	NA	NA	False	ATTAAA	-3	NA	67069878	66345080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_66349247_66353416_66353564_66371693_66371928_66377173_66377286_66379279_66379437_66392307_66392503_66392676_66392817_66394207_66394353_66406282_66406429_66420719_66420790_66432547_66432629_66444583_66444730_66445321_66445509_66455408_66456343_66462923_66463094_66465274_66465423_66515618_66515765_66517900_66517977_66529830_66529915_66539077_66539224_66541814_66541951_66596846_66596928_67069049
WTC11_00022645	chr12	-	317	1	FSM	ENSG00000237766.2	ENST00000543442.1	1125	1	-99	907	-99	-907	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAGACAAAGAAAAAGAG	-67267055	False	NA	NA	False	NA	NA	NA	67267065	67266748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_67266700_67267100
WTC11_00022646	chr12	-	387	3	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAACCCCCTTTGACT	NA	False	NA	NA	False	AAAAAG	-44	NA	67771771	67766987	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_67767267_67769850_67769934_67771746
WTC11_00022647	chr12	-	1380	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCAGTGGCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	67770118	67768738	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_67768700_67770100
WTC11_00022652	chr12	-	241	1	FSM	ENSG00000234040.3	ENST00000427342.3	318	1	-35	112	-35	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAGTTTGAAGACATGG	NA	False	NA	NA	False	GGGGCT	-17	NA	68627222	68626981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68627000_68627200
WTC11_00022653	chr12	-	513	1	FSM	ENSG00000234925.2	ENST00000414313.2	475	1	37	-75	37	75	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACCAATAGCACCATAAT	-68642912	False	NA	NA	False	ATTAAA	-17	NA	68642956	68642443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68642400_68643000
WTC11_00022654	chr12	-	564	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	1	0	-1	multi-exon	FALSE	canonical	1	6	junction_1	79.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTCTGGGCGAC	-71116852	False	NA	-4	True	AATAAA	-19	NA	71118247	71047402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71047680_71115849_71115959_71118069
WTC11_00022655	chr12	-	884	4	NIC	ENSG00000258053.1	novel	565	3	NA	NA	-226	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	77.0757203447796	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTCTGGGCGAC	-71117078	True	NA	-4	True	AATAAA	-19	NA	71118473	71047402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_71047680_71069536_71069631_71115849_71115959_71118069
WTC11_00022656	chr12	-	902	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-200	-62854	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCACATTTACCACTCAA	-71117052	True	NA	-46	True	NA	NA	NA	71118447	71110255	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_71110671_71115849_71115959_71118069
WTC11_00022658	chr12	-	1071	1	FSM	ENSG00000257802.1	ENST00000550293.1	1201	1	124	6	124	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAAACCATGAGGAACAA	NA	False	NA	NA	False	NA	NA	NA	71850304	71849233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71849200_71850300
WTC11_00022659	chr12	-	593	6	FSM	ENSG00000180881.20	ENST00000552497.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.22710574513201	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTACAGTTTGATGGT	-75390367	True	NA	NA	False	NA	NA	NA	75390901	75299870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75299912_75304756_75304877_75312847_75312916_75316311_75316435_75321399_75321577_75390837
WTC11_00022662	chr12	-	5560	14	NNC	ENSG00000165891.16	novel	5725	13	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	27.460353346546	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGATGGTGGTTGTATT	-77061150	True	NA	-4	True	AATAAA	-16	NA	77065533	77021250	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_77024186_77025557_77025788_77025916_77025983_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
WTC11_00022663	chr12	-	209	2	Antisense	novelGene_ENSG00000257474.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGGCTTGGGCTCAGAG	-79545401	False	NA	NA	False	NA	NA	NA	79545411	79539875	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_79540033_79545359
WTC11_00022665	chr12	-	385	2	Antisense	novelGene_ENSG00000257474.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGGCTTGGGCTCAGAG	-79545577	False	NA	NA	False	NA	NA	NA	79545587	79539875	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_79539964_79545290
WTC11_00022666	chr12	-	967	7	NIC	ENSG00000177425.11	novel	8991	7	NA	NA	110	2	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	344.618025258885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTGTATGTGTT	-79689910	False	NA	-3	True	AATAAA	-21	NA	79689920	79584876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_79585149_79592610_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
WTC11_00022668	chr12	-	5746	25	NIC	ENSG00000058272.19	novel	5620	25	NA	NA	-45	79	combination_of_known_junctions	TRUE	canonical	3	45	junction_13	102.554829508686	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCTTCCATAAACATTGT	-79935161	False	NA	80	True	NA	NA	NA	79935175	79773483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806298_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
WTC11_00022671	chr12	-	371	1	FSM	ENSG00000277130.1	ENST00000619055.1	682	1	-43	354	-43	-354	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCACTGAGCTAACTTTA	-79819478	False	NA	NA	False	NA	NA	NA	79819508	79819137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79819100_79819500
WTC11_00022677	chr12	-	7701	53	FSM	ENSG00000198707.17	ENST00000673058.2	7712	53	11	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	9.70731058008473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	-88140990	True	NA	NA	False	AATAAA	-27	NA	88142088	88049015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88054339_88054414_88055575_88055718_88058847_88059021_88060829_88060995_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88103012_88106674_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
WTC11_00022682	chr12	-	2599	9	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	33.4878709385951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTGTTCCTTTTCTT	-89523904	False	NA	NA	False	AATAAA	-20	NA	89525204	89419722	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119
WTC11_00022686	chr12	-	542	4	FSM	ENSG00000102189.17	ENST00000549790.1	542	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.6891789161883	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGCATTACAAGATAAACA	-92821080	False	NA	NA	False	NA	NA	NA	92821099	92813003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_92813094_92816199_92816401_92819307_92819512_92821052
WTC11_00022689	chr12	-	2908	8	NIC	ENSG00000173588.16	novel	3122	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	37.8056253237855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	-94457607	True	NA	-5	True	AATAAA	-15	NA	94459990	94368397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412516_94412592_94459556
WTC11_00022696	chr12	-	3686	16	Fusion	ENSG00000238105.7_ENSG00000257489.6	novel	2343	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_2	9.27840982544363	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTGAGTATGTTAT	-100199764	False	NA	4	True	NA	NA	NA	100199783	100165047	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_100166141_100166330_100166634_100167069_100167142_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111_100173685_100177042_100177121_100180552_100180717_100195581_100195674_100196871_100196980_100198843_100198973_100199519
WTC11_00022707	chr12	-	586	4	FSM	ENSG00000120837.8	ENST00000550189.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_2	44.5745318414999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGGCATTTAGTAAGC	-104123981	False	NA	NA	False	NA	NA	NA	104128612	104121253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_104121322_104123225_104123424_104126113_104126245_104128423
WTC11_00022714	chr12	-	547	4	FSM	ENSG00000110880.11	ENST00000550032.5	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_1	59.218990947912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATATGCATTCAGACATGA	NA	False	NA	NA	False	TATAAA	-7	NA	108701356	108658858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108658920_108662028_108662159_108678271_108678395_108701123
WTC11_00022715	chr12	-	967	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	17	5	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTCCCTCTCGAC	-109091803	True	NA	3	True	AATAAA	-23	NA	109093452	109088182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109088513_109092506_109092938_109093246
WTC11_00022716	chr12	-	1071	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.4584587272668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTCCCTCTCGAC	-109091811	True	NA	3	True	AATAAA	-23	NA	109093460	109088182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
WTC11_00022721	chr12	-	2239	15	NIC	ENSG00000139436.22	novel	2989	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_7	37.0746626720311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTGTTGGCTTTTTG	-109994207	True	NA	0	True	AATAAA	-17	NA	109996289	109948061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965575_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
WTC11_00022722	chr12	-	2495	5	ISM	ENSG00000196510.14	ENST00000455511.9	3023	11	19800	578	-643	0	3prime_fragment	FALSE	canonical	3	385	junction_3	20.820662813657	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGGGGTGATCAGAA	-110383896	False	NA	-23	True	AATAAA	-18	NA	110383908	110373477	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842
WTC11_00022723	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	-110423304	True	NA	NA	False	AATAAA	-24	NA	110450285	110442643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110443068_110445451_110445552_110450254
WTC11_00022726	chr12	-	2432	8	NNC	ENSG00000186298.12	novel	1472	8	NA	NA	0	41244	intron_retention	FALSE	non_canonical	0	0	junction_1	678.624539274938	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAATGAAATGGAAAATAA	-110702263	True	NA	NA	False	AAAAAG	-4	NA	110742867	110678435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_110678469_110719808_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
WTC11_00022733	chr12	-	918	3	NIC	ENSG00000111412.6	novel	1371	4	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	106.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTGTGT	-116732894	True	NA	-59	True	NA	NA	NA	116738035	116717335	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_116717894_116719762_116719877_116737789
WTC11_00022734	chr12	-	1069	4	NIC	ENSG00000111412.6	novel	8426	5	NA	NA	34	-6	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	95.6486626496506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTTTGTTGTTGTT	-116732894	True	NA	-65	True	NA	NA	NA	116738035	116717341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_116717894_116719762_116719877_116723066_116723224_116737789
WTC11_00022738	chr12	-	687	1	FSM	ENSG00000176871.9	ENST00000614776.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCTTTTTCCTTT	-118036329	False	55	NA	False	NA	NA	NA	118036384	118035697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118035700_118036400
WTC11_00022748	chr12	-	3679	12	NNC	ENSG00000089159.17	novel	3785	12	NA	NA	0	8003	intron_retention	TRUE	non_canonical	0	0	junction_1	249.318277119398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATGGAGGTGAATTA	-120256468	True	NA	NA	False	NA	NA	NA	120265737	120202435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120202471_120210451_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
WTC11_00022751	chr12	-	1631	9	NNC	ENSG00000110871.15	novel	1506	7	NA	NA	0	16006	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	177.859802583383	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCACGGTGGCTTAC	-120522407	True	NA	NA	False	NA	NA	NA	120529158	120487272	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120487312_120503282_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120526456_120526547_120528939
WTC11_00022754	chr12	-	1015	2	FSM	ENSG00000256008.3	ENST00000540369.2	1015	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCCTGAACTTTCTTG	NA	False	NA	0	True	AATAAA	-23	NA	120641591	120629610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120630497_120641462
WTC11_00022761	chr12	-	1807	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	29	-42	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	115.089766360818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	-121580321	False	NA	-13	True	AATAAA	-21	NA	121580430	121516388	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
WTC11_00022765	chr12	-	2691	12	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	-41	0	combination_of_known_junctions	FALSE	non_canonical	3	15	junction_7	37.4598407554208	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGACTTTGAATACAAA	-122499187	True	NA	-3	True	AATAAA	-20	NA	122500973	122472892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
WTC11_00022768	chr12	-	1500	10	FSM	ENSG00000090975.14	ENST00000451868.2	1639	10	109	30	109	-30	multi-exon	FALSE	canonical	0	0	junction_9	5.95248677154617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTGTCCAATAAAACTG	-123105345	False	NA	-44	True	NA	NA	NA	123105390	123000333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123000479_123000777_123000849_123001053_123001159_123004393_123004490_123005239_123005549_123009849_123010078_123012612_123012735_123013827_123014043_123034512_123034686_123105354
WTC11_00022771	chr12	-	3967	24	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	32.6316440989012	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATAGACTAGTACATGC	-123230226	True	NA	-6	True	AATAAA	-17	NA	123233141	123156400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221724_123223037_123223128_123227462_123227573_123230260_123230523_123233074
WTC11_00022775	chr12	-	3566	14	NIC	ENSG00000196498.13	novel	7175	35	NA	NA	31	9	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	64.0034207665691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-124341986	False	NA	-3	True	ATTAAA	-27	NA	124342024	124324405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_124325584_124326179_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822
WTC11_00022776	chr12	-	9068	48	NNC	ENSG00000196498.13	novel	8475	47	NA	NA	3	9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	106.110907411996	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-124561811	True	NA	-3	True	ATTAAA	-27	NA	124567586	124324405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336638_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402559_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
WTC11_00022778	chr12	-	8993	48	NIC	ENSG00000196498.13	novel	8475	47	NA	NA	-32	9	combination_of_known_splicesites	FALSE	canonical	3	94	junction_38	104.129737651968	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-124561846	True	NA	-3	True	ATTAAA	-27	NA	124567621	124324405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429704_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124567307
WTC11_00022781	chr12	-	3896	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	-169	18	-169	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTATTTTGCATTAG	NA	False	NA	19	True	AATAAA	-41	NA	124915517	124911621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124911600_124915500
WTC11_00022785	chr12	-	6540	11	NNC	ENSG00000111450.14	novel	3441	11	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	52.2976098880245	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTGGCTGTTACT	-130837339	True	NA	-15	True	AATAAA	-18	NA	130839297	130789599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_130791978_130795994_130796121_130798524_130798636_130801152_130801291_130801414_130804541_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
WTC11_00022788	chr12	-	7827	49	NNC	ENSG00000177084.18	novel	7823	49	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_36	43.6176370736528	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTTGTCACTGTGTAT	-132680742	True	NA	NA	False	NA	NA	NA	132687342	132623761	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673570_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
WTC11_00022790	chr12	-	2049	11	NIC	ENSG00000176915.15	novel	1288	6	NA	NA	0	1039	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	149.435604860421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTTCTGCTTGTGTT	-132754903	True	NA	NA	False	NA	NA	NA	132761813	132733928	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132734072_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
WTC11_00022795	chr12	+	384	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTCGGCATCCGTGAT	NA	False	NA	NA	False	NA	NA	NA	11464998	11465382	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11465000_11465400
WTC11_00022796	chr12	+	311	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCACACAAGAACTTCCAAA	NA	False	NA	NA	False	NA	NA	NA	12060276	12060587	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_12060300_12060600
WTC11_00022797	chr12	+	226	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGTGAGAGTTACCTA	NA	False	NA	NA	False	NA	NA	NA	20819970	20820196	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_20820000_20820200
WTC11_00022798	chr12	+	204	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGCGCTCAGGAGGTG	32402095	False	NA	NA	False	NA	NA	NA	32402106	32402310	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_32402100_32402300
WTC11_00022800	chr12	+	309	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCCACGTATAGGCCCA	72708236	False	NA	NA	False	NA	NA	NA	72708254	72708563	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72708300_72708600
WTC11_00022805	chr13	+	365	1	FSM	ENSG00000228797.2	ENST00000447172.1	505	1	79	61	79	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGGTGGCCATCGGG	NA	False	NA	NA	False	NA	NA	NA	18697081	18697446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18697100_18697400
WTC11_00022806	chr13	+	2942	15	NNC	ENSG00000196199.14	novel	4239	14	NA	NA	-31536	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	29.2540769878006	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGCGTATTTCAGTT	19602006	False	NA	100	True	NA	NA	NA	19602122	19672072	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19602156_19633619_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
WTC11_00022807	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	15.0301472196312	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	19628809	True	NA	7	True	AATAAA	-14	NA	19633658	19673441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
WTC11_00022812	chr13	+	1284	1	FSM	ENSG00000275964.1	ENST00000620617.1	1191	1	-30	-63	-30	63	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGTTAACCATCTAATGCA	19863341	True	NA	80	True	AATGAA	-6	NA	19863827	19865111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19863800_19865100
WTC11_00022813	chr13	+	1916	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	200	junction_3	41.9299707724629	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19950986	True	NA	NA	False	TATAAA	-42	NA	19958672	20019963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
WTC11_00022814	chr13	+	7429	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	0	0	0	0	multi-exon	FALSE	canonical	2	241	junction_12	78.6961014846917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	19951040	True	NA	NA	False	AATAAA	-16	NA	19958726	20089115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00022815	chr13	+	7159	27	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	91	junction_3	110.156296975314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	19951096	True	NA	NA	False	AATAAA	-16	NA	19958782	20089115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00022816	chr13	+	5051	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_3	108.040333209408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGTATGTATGTGT	19951096	True	NA	12	True	AATAAA	-19	NA	19958782	20086746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00022817	chr13	+	7222	26	NIC	ENSG00000121741.17	novel	7429	25	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	200	junction_3	84.4612668623908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	19950986	True	NA	NA	False	AATAAA	-16	NA	19958672	20089115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00022818	chr13	+	7491	25	NNC	ENSG00000121741.17	novel	7429	25	NA	NA	0	0	intron_retention	FALSE	canonical	2	33	junction_1	102.404528708451	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	19951096	True	NA	NA	False	AATAAA	-16	NA	19958782	20089115	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19958960_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00022819	chr13	+	747	1	FSM	ENSG00000279951.1	ENST00000623873.1	1513	1	-53	819	-53	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTAAGTAGTTGGCT	20092567	False	NA	NA	False	NA	NA	NA	20092578	20093325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20092600_20093300
WTC11_00022820	chr13	+	2804	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	-24	70	-5	-63	multi-exon	TRUE	canonical	1	12	junction_25	12.3783035994437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACTTCCTTAGCTTTT	20566312	True	NA	24	True	AATAAA	-26	NA	20567132	20691374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
WTC11_00022821	chr13	+	3075	28	FSM	ENSG00000032742.18	ENST00000319980.10	3091	28	0	16	0	-16	multi-exon	FALSE	canonical	1	4	junction_2	15.7087692738408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTCATAACACAACCTA	20566317	True	NA	71	True	AAGAAA	-2	NA	20567137	20691421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20567257_20567669_20567786_20567884_20567998_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
WTC11_00022822	chr13	+	575	4	FSM	ENSG00000032742.18	ENST00000389373.3	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	19.9387952383176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTAAGTGAAAAAAATTT	20566345	True	NA	NA	False	NA	NA	NA	20567165	20583016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20567257_20567669_20567998_20574379_20574476_20582956
WTC11_00022824	chr13	+	209	1	FSM	ENSG00000238286.1	ENST00000419313.1	864	1	-195	850	-195	-850	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGCCACTCACCTTCG	NA	False	NA	NA	False	NA	NA	NA	20607072	20607281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20607100_20607300
WTC11_00022825	chr13	+	795	2	FSM	ENSG00000172458.5	ENST00000682841.1	2056	2	14	1247	14	166	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCGAGCCGGAGAAGG	20703678	False	NA	NA	False	NA	NA	NA	20703712	20721851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20704292_20721635
WTC11_00022826	chr13	+	1015	1	FSM	ENSG00000213621.3	ENST00000454001.1	886	1	-43	-86	-43	86	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGCAAATGAAAGAAATA	NA	False	NA	NA	False	AATAAA	-29	NA	20961266	20962281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20961300_20962300
WTC11_00022827	chr13	+	2557	3	FSM	ENSG00000150459.12	ENST00000450573.5	479	3	-313	-1765	-53	0	multi-exon	FALSE	canonical	3	3150	junction_1	102.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTCAGTGCTTTAGT	NA	False	NA	10	True	AATAAA	-21	NA	21140460	21149084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21140996_21146804_21146928_21147185
WTC11_00022828	chr13	+	2303	4	FSM	ENSG00000150459.12	ENST00000621421.4	2300	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	3072	junction_1	119.349160961534	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTCAGTGCTTTAGT	21140499	False	NA	10	True	AATAAA	-21	NA	21140510	21149084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
WTC11_00022829	chr13	+	522	2	FSM	ENSG00000150459.12	ENST00000471009.1	670	2	148	0	148	0	multi-exon	FALSE	canonical	3	3355	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTCTTCTTCCTCC	21146455	False	NA	14	True	NA	NA	NA	21146611	21147391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21146928_21147185
WTC11_00022830	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1757	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	21154216	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21176718_21176911
WTC11_00022831	chr13	+	1473	3	NIC	ENSG00000233325.4	novel	1310	3	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	11	junction_2	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACCTTGTGGTGATTT	21297787	True	NA	NA	False	AATAAA	-9	NA	21298135	21305512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_21298363_21301418_21301619_21304466
WTC11_00022832	chr13	+	1711	1	FSM	ENSG00000215571.5	ENST00000400595.3	1711	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCCCAGCCAGAGGCCC	NA	False	NA	NA	False	NA	NA	NA	21319155	21320866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21319200_21320900
WTC11_00022833	chr13	+	381	1	FSM	ENSG00000235076.2	ENST00000449535.2	942	1	223	338	223	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCAGATAAGAGGCTCA	NA	False	NA	NA	False	NA	NA	NA	21358595	21358976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21358600_21359000
WTC11_00022836	chr13	+	2427	1	FSM	ENSG00000234685.1	ENST00000417358.1	873	1	80	-1634	80	1634	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTAAGGCATTTGTAG	22915585	False	NA	NA	False	NA	NA	NA	22915730	22918157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_22915700_22918200
WTC11_00022837	chr13	+	2214	10	FSM	ENSG00000127863.16	ENST00000382263.3	4151	10	-24	1961	-3	-1961	multi-exon	FALSE	canonical	0	0	junction_2	1.87247772737252	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTAGAGACTTGTATG	23579321	True	NA	NA	False	NA	NA	NA	23579355	23674132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23579530_23590149_23590253_23593344_23593456_23615866_23616046_23626706_23626793_23659049_23659215_23660364_23660491_23667979_23668083_23668691_23669098_23673371
WTC11_00022838	chr13	+	844	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	8	0	-7	multi-exon	FALSE	canonical	2	11	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATTCCCTTGTGAAC	23888697	True	NA	0	True	AATAAA	-12	NA	23888841	23892096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
WTC11_00022839	chr13	+	797	4	FSM	ENSG00000205861.13	ENST00000663394.1	804	4	7	0	7	0	multi-exon	FALSE	canonical	1	2	junction_1	5.90668171555645	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTGTGAACAACTTTG	23889293	False	NA	7	True	AATAAA	-19	NA	23889437	23892103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23889554_23889999_23890043_23891384_23891532_23891612
WTC11_00022840	chr13	+	8468	13	FSM	ENSG00000182957.16	ENST00000382108.8	8454	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	26	junction_1	8.40469445541531	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCTGATGATGCATTT	24156882	True	NA	4	True	ATTAAA	-15	NA	24160705	24307069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
WTC11_00022841	chr13	+	6665	12	FSM	ENSG00000182957.16	ENST00000382095.8	6665	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.2144147532306	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGATGATGCATTTGAG	24156924	True	NA	7	True	ATTAAA	-18	NA	24160747	24307072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24160933_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
WTC11_00022842	chr13	+	288	1	Genic_Genomic	ENSG00000273628.1	novel	NA	NA	NA	NA	3598	95	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTCAGTGTAGCAATT	NA	False	NA	NA	False	AATAGA	-26	NA	24936603	24936891	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_24936600_24936900
WTC11_00022843	chr13	+	303	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	25071023	False	NA	NA	False	NA	NA	NA	25071038	25071341	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_25071000_25071300
WTC11_00022844	chr13	+	6505	13	FSM	ENSG00000139496.16	ENST00000463407.5	6360	13	-145	0	-70	0	multi-exon	FALSE	canonical	3	140	junction_2	25.3245598842968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATTGTCTTGTTTTTT	NA	False	NA	11	True	AATAAA	-12	NA	25301485	25336340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356
WTC11_00022846	chr13	+	4474	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	-238	0	-169	0	multi-exon	FALSE	canonical	3	140	junction_2	24.8080632053371	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	NA	False	NA	14	True	AATAAA	-29	NA	25301386	25342421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
WTC11_00022847	chr13	+	8759	36	FSM	ENSG00000132932.19	ENST00000684424.1	8756	36	-3	0	-1	0	multi-exon	TRUE	canonical	2	6	junction_17	4.41389272406929	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAACAAAAAAAAAAAAAAA	25468400	True	NA	NA	False	AATAAA	-9	NA	25468834	26025111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25469122_25529998_25530099_25530561_25530661_25532271_25532318_25533272_25533314_25537987_25538062_25540318_25540389_25541918_25542047_25543290_25543403_25551337_25551504_25553792_25553921_25554990_25555069_25558972_25559062_25559720_25559766_25563955_25564032_25570766_25570873_25571609_25571693_25574807_25574858_25577068_25577139_25578814_25578900_25579807_25579948_25581818_25581958_25589634_25589700_25699172_25699346_25769045_25769230_25774848_25774960_25828117_25828193_25837162_25837286_25839545_25839625_25860194_25860257_25860803_25860861_25862300_25862409_25961574_25961664_25968574_25968680_26012530_26012623_26019887
WTC11_00022848	chr13	+	5485	2	FSM	ENSG00000132932.19	ENST00000683868.1	7867	2	2382	0	2382	0	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACCAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26012352	26025102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26012623_26019887
WTC11_00022849	chr13	+	454	1	FSM	ENSG00000277368.1	ENST00000621997.1	464	1	-1	11	-1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTGTCTGTCTGTCT	26222064	False	NA	NA	False	AATAAA	-4	NA	26222189	26222643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26222200_26222600
WTC11_00022850	chr13	+	3209	13	FSM	ENSG00000132964.12	ENST00000381527.8	3065	13	-204	60	-179	0	multi-exon	FALSE	canonical	3	74	junction_11	14.8237328482254	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGAACATTGTTAAAAA	26253691	True	NA	-54	True	AATAAA	-4	NA	26253924	26405178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
WTC11_00022851	chr13	+	3032	12	FSM	ENSG00000132964.12	ENST00000536792.5	3032	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	35.9425620761103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	26250901	True	NA	6	True	AATAAA	-22	NA	26254103	26405238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
WTC11_00022852	chr13	+	3008	13	NIC	ENSG00000132964.12	novel	3065	13	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	21.0454204572449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	26250980	False	NA	6	True	AATAAA	-22	NA	26254182	26405238	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401468_26401625_26403955
WTC11_00022853	chr13	+	4877	10	FSM	ENSG00000132970.14	ENST00000335327.6	4857	10	-25	5	-25	0	multi-exon	FALSE	canonical	3	119	junction_6	22.3098273203028	3688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAGTGTTGTATGTTT	26554090	True	NA	24	True	AATAAA	-35	NA	26557657	26688943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26676548_26676725_26681053_26681321_26682606_26682975_26685687
WTC11_00022854	chr13	+	4843	10	FSM	ENSG00000132970.14	ENST00000361042.8	4823	10	-20	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	66.9859023310958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAGTGTTGTATGTTT	26554115	True	NA	24	True	AATAAA	-35	NA	26557682	26688943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26680034_26680202_26681053_26681321_26682606_26682975_26685687
WTC11_00022855	chr13	+	551	3	FSM	ENSG00000122026.11	ENST00000473558.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	12896	junction_1	3240	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTCCGCCTCCCTCCC	27243999	True	NA	NA	False	NA	NA	NA	27251361	27254467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251586_27253764_27253844_27254219
WTC11_00022856	chr13	+	566	6	FSM	ENSG00000122026.11	ENST00000311549.11	566	6	0	0	0	0	multi-exon	FALSE	canonical	3	12896	junction_1	3006.75260039798	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27251339	False	NA	0	True	AATAAA	-21	NA	27251557	27256568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
WTC11_00022857	chr13	+	637	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	-21	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	7965.98944011351	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27251339	False	NA	0	True	AATAAA	-21	NA	27251557	27256568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
WTC11_00022858	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	8097.27432164676	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244316	True	NA	0	True	AATAAA	-21	NA	27251582	27256568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
WTC11_00022859	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	8057.76806317978	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244330	True	NA	0	True	AATAAA	-21	NA	27251596	27256568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
WTC11_00022862	chr13	+	453	4	FSM	ENSG00000122026.11	ENST00000483765.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	9450.37157411754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCTCTGGGCTACAA	27253752	False	NA	-23	True	NA	NA	NA	27253764	27256545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27253844_27255241_27255355_27256183_27256335_27256435
WTC11_00022863	chr13	+	707	6	FSM	ENSG00000122034.17	ENST00000435781.5	688	6	-19	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	440.053905788825	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACATGGACGGAAC	27414172	True	NA	NA	False	AAAAAG	-14	NA	27424618	27434169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430537_27430622_27432730_27432805_27434138
WTC11_00022864	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	90.0387937224839	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	27414172	True	NA	5	True	ATTAAA	-17	NA	27424618	27435823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
WTC11_00022866	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	324.158565381518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	27414215	True	NA	12	True	ATTAAA	-16	NA	27424661	27435688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
WTC11_00022868	chr13	+	639	2	FSM	ENSG00000186184.20	ENST00000626929.1	624	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	15	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCGCGCCCCTTCGCCA	NA	False	NA	NA	False	NA	NA	NA	27620726	27621597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27621105_27621336
WTC11_00022869	chr13	+	1749	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	-1138	1112	-10	831	multi-exon	FALSE	canonical	3	19	junction_2	135.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTAACCCAAAGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	27620731	27650437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27648378_27648454_27650041
WTC11_00022872	chr13	+	2036	3	FSM	ENSG00000186184.20	ENST00000399697.7	2036	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	14.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCATTCTGTATTTAT	27621767	False	NA	13	True	AATAAA	-19	NA	27621778	27667415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27648378_27648454_27665685
WTC11_00022873	chr13	+	715	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	-22	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	27607277	True	NA	19	True	AATAAA	-19	NA	27621869	27623449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27622874
WTC11_00022874	chr13	+	384	1	FSM	ENSG00000180389.7	ENST00000381026.4	156	1	-54	-174	-54	174	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTGGAAAGTGCAAGGCA	NA	False	NA	NA	False	AATAAA	-38	NA	27945205	27945589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27945200_27945600
WTC11_00022875	chr13	+	2201	14	FSM	ENSG00000152520.14	ENST00000503791.5	2443	14	0	242	0	-242	multi-exon	FALSE	canonical	3	7	junction_5	9.53908186568481	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTAAGAATTAACATGG	28137745	False	NA	NA	False	NA	NA	NA	28138505	28272071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28197184_28197347_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980
WTC11_00022876	chr13	+	5590	19	FSM	ENSG00000152520.14	ENST00000380958.8	5590	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	9.63676729773098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	28137778	True	NA	NA	False	AATAAA	-17	NA	28138544	28295335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28197184_28197347_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980_28272072_28277236_28277377_28280411_28280542_28281314_28281380_28287983_28288123_28292381
WTC11_00022878	chr13	+	1938	1	ISM	ENSG00000152520.14	ENST00000380958.8	5590	19	154853	0	53841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	28293382	False	NA	NA	False	AATAAA	-17	NA	28293397	28295335	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_28293400_28295300
WTC11_00022879	chr13	+	2730	1	FSM	ENSG00000279393.1	ENST00000623899.1	1635	1	-339	-756	-339	756	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTCACAGTACATATC	28495128	True	NA	NA	False	CATAAA	-23	NA	28495293	28498023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28495300_28498000
WTC11_00022880	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_1	629.289249868453	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	28598600	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
WTC11_00022881	chr13	+	862	2	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGGTTATTTTTCT	NA	False	NA	13	True	AATAAA	-28	NA	29647271	29655478	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_29647725_29655069
WTC11_00022882	chr13	+	560	1	FSM	ENSG00000224117.1	ENST00000433704.1	1024	1	463	1	463	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATGCTCTACGGAAAC	NA	False	NA	NA	False	AGTAAA	-26	NA	30554132	30554692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30554100_30554700
WTC11_00022883	chr13	+	949	3	FSM	ENSG00000132952.12	ENST00000465952.5	1133	3	184	0	-43	0	multi-exon	FALSE	canonical	3	24	junction_1	62	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTACTAATATTTTATT	30615669	True	NA	NA	False	AATACA	-35	NA	30617876	30631474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30618057_30621763_30621893_30630834
WTC11_00022884	chr13	+	4992	10	NNC	ENSG00000132952.12	novel	4894	9	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	49.17943964657	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	30615676	True	NA	NA	False	AATAAA	-28	NA	30617883	30660766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30618057_30619678_30619741_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
WTC11_00022886	chr13	+	4088	7	FSM	ENSG00000132952.12	ENST00000614860.1	4074	7	-17	3	0	1	multi-exon	FALSE	canonical	1	1	junction_2	60.9580912503737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTTTTGTGATGAT	30615712	True	NA	NA	False	AATAAA	-29	NA	30617919	30660767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30618057_30621763_30621893_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
WTC11_00022887	chr13	+	4711	8	NIC	ENSG00000132952.12	novel	4894	9	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	42.0742783415139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTACCTGTTTTTGT	30615723	True	NA	NA	False	AATAAA	-23	NA	30617930	30660761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_30618057_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
WTC11_00022888	chr13	+	694	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	21	10	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	65.2805909559308	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGCGTATTTTTAAAAC	30863340	False	NA	19	True	AATAAA	-28	NA	30863389	30883405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
WTC11_00022889	chr13	+	573	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	39	29	39	0	multi-exon	FALSE	canonical	3	73	junction_1	49.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	30863346	False	NA	9	True	AATAAA	-18	NA	30863407	30883395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30863579_30882559_30882660_30883093
WTC11_00022890	chr13	+	528	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.2008114810186	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	30861054	True	NA	9	True	AATAAA	-18	NA	30863505	30883395	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30881951_30882005_30882559_30882660_30883093
WTC11_00022892	chr13	+	4233	15	FSM	ENSG00000187676.8	ENST00000343307.5	4215	15	-18	0	-18	0	multi-exon	FALSE	canonical	3	34	junction_13	7.02655313646683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAACACTTTCTTACAAA	31199135	True	NA	NA	False	AATAAA	-22	NA	31199956	31332276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_31200155_31215050_31215101_31222951_31222992_31229184_31229295_31247022_31247100_31247854_31247967_31260945_31261083_31269213_31269278_31274508_31274629_31276701_31276772_31284647_31284762_31286719_31286820_31317565_31317686_31323750_31323896_31329500
WTC11_00022893	chr13	+	11961	27	FSM	ENSG00000139618.17	ENST00000380152.8	11954	27	-7	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_9	11.0252534219287	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTTCCATAACTC	32313226	True	NA	5	True	AATAAA	-17	NA	32315500	32400268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264_32341197_32344557_32344654_32346826_32346897_32354860_32355289_32356427_32356610_32357741_32357930_32362522_32362694_32363178_32363534_32370401_32370558_32370955_32371101_32376669_32376792_32379316_32379516_32379749_32379914_32380006_32380146_32394688_32394934_32396897_32397045_32398161
WTC11_00022894	chr13	+	7750	35	NIC	ENSG00000083642.19	novel	7472	35	NA	NA	-34	250	combination_of_known_junctions	TRUE	canonical	2	69	junction_31	29.5471003969681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGCACTAAATAAATAAGT	32580074	True	NA	-11	True	AATAAA	-23	NA	32586417	32778269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764589_32770120_32770561_32770653_32770762_32773188_32773325_32775016
WTC11_00022895	chr13	+	584	4	FSM	ENSG00000083642.19	ENST00000482955.5	581	4	-3	0	0	0	multi-exon	FALSE	canonical	2	117	junction_3	31.0304509939654	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACATTTTAAACTGATTT	32580108	True	NA	NA	False	NA	NA	NA	32586451	32658349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238
WTC11_00022896	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_3	23.6819504071456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	32580108	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
WTC11_00022897	chr13	+	951	3	FSM	ENSG00000083642.19	ENST00000493653.1	972	3	-8	29	0	-29	multi-exon	FALSE	canonical	3	176	junction_1	6	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	32580199	True	NA	NA	False	NA	NA	NA	32586542	32652576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32586594_32648753_32648881_32651803
WTC11_00022898	chr13	+	1457	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	-1	5	-1	-5	multi-exon	FALSE	canonical	3	28	junction_8	151.01567592472	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCTTTGGTCTGCTAT	33810511	True	NA	11	True	AATAAA	-22	NA	33818067	33966553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
WTC11_00022899	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_8	34.069552022297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	33810592	True	NA	14	True	AATAAA	-18	NA	33818148	33837500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
WTC11_00022900	chr13	+	5160	1	FSM	ENSG00000276672.1	ENST00000621575.1	4636	1	-524	0	-524	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCATGAGTCACAACT	33845652	False	NA	3	True	AATAAA	-15	NA	33845665	33850825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33845700_33850800
WTC11_00022901	chr13	+	11125	57	NIC	ENSG00000172915.20	novel	11138	58	NA	NA	2	-1	combination_of_known_junctions	TRUE	canonical	1	4	junction_48	9.96740542560436	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACTGTTTCAGATTTCA	34936545	True	NA	10	True	AATAAA	-16	NA	34942271	35672735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_34943115_35040932_35041165_35044946_35045048_35045305_35045402_35048562_35048685_35050268_35050396_35056009_35056130_35058716_35058864_35069907_35070106_35070718_35070853_35098296_35098406_35109289_35109443_35110809_35110979_35117413_35117494_35118227_35118291_35118376_35118475_35123481_35123575_35142268_35142378_35155773_35155856_35156082_35156207_35157077_35157271_35159015_35160033_35161749_35161968_35164355_35164510_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863_35196303_35208699_35208855_35211052_35211180_35232491_35232620_35290388_35290451_35309527_35309593_35349107_35349217_35352156_35352324_35432268_35432394_35452091_35452236_35472399_35472537_35550476_35550595_35550929_35551033_35554986_35555103_35566904_35567018_35583897_35584039_35593327_35593448_35606425_35606579_35628080_35628249_35646258_35646349_35649654_35649848_35651804_35651877_35654854_35655011_35655578_35655750_35665084_35665187_35667373_35667571_35668367_35668520_35670900
WTC11_00022902	chr13	+	3472	13	FSM	ENSG00000172915.20	ENST00000379922.4	3791	13	322	-3	322	-1	multi-exon	FALSE	canonical	2	22	junction_3	9.07798007390533	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACTGTTTCAGATTTCA	NA	False	NA	10	True	AATAAA	-16	NA	35593327	35672735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_35593448_35606425_35606579_35628080_35628249_35645868_35645932_35646258_35646349_35649654_35649848_35651804_35651877_35654854_35655011_35655578_35655750_35665084_35665187_35667373_35667571_35668367_35668520_35670900
WTC11_00022903	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.91607978309962	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432098	True	NA	NA	False	AATAAA	-16	NA	36432494	36442870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
WTC11_00022904	chr13	+	1758	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	-59	0	-31	0	multi-exon	FALSE	canonical	3	17	junction_1	4.49826355386165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432067	True	NA	NA	False	AATAAA	-16	NA	36432463	36442870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
WTC11_00022905	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	36817166	True	NA	21	True	ATTAAA	-21	NA	36819221	36829104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36819958_36825427_36825536_36827642
WTC11_00022907	chr13	+	2427	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	777.533628346631	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	36986994	True	NA	26	True	AATAAA	-24	NA	37000782	37009401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
WTC11_00022908	chr13	+	1169	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	590.984949046928	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	36986994	True	NA	11	True	ATTAAA	-24	NA	37000782	37009614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
WTC11_00022912	chr13	+	874	10	NIC	ENSG00000120699.14	novel	3630	11	NA	NA	974	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	784.385597415008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATGTTTCTATTATT	37002261	False	NA	21	True	AATAAA	-19	NA	37002272	37009396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
WTC11_00022914	chr13	+	3124	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	-2	46	0	-46	multi-exon	FALSE	canonical	3	838	junction_5	81.2034482026472	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTCGCCTAGGAAA	38340599	True	NA	NA	False	NA	NA	NA	38349848	38363573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
WTC11_00022915	chr13	+	3240	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	-41	-2353	-39	-141	multi-exon	FALSE	canonical	3	19	junction_2	383.40547726917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCATTTTACAGACGGAA	38340560	True	NA	NA	False	NA	NA	NA	38349809	38363478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
WTC11_00022918	chr13	+	16132	24	FSM	ENSG00000150893.11	ENST00000280481.9	16122	24	-10	0	-10	0	multi-exon	FALSE	canonical	3	26	junction_2	6.63951623263342	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAAATGGCCAAGTTAT	38685272	True	NA	NA	False	AATAAA	-18	NA	38687066	38887131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_38692518_38697697_38697788_38764303_38764451_38769577_38769809_38783069_38783196_38784556_38784809_38846572_38846723_38848460_38848671_38850037_38850236_38850943_38851109_38851685_38851869_38856125_38856257_38857874_38858034_38859286_38859591_38861430_38861563_38864274_38864607_38872741_38872935_38874481_38874587_38876021_38876150_38876247_38876383_38877116_38877244_38878133_38878322_38878830_38878978_38880283
WTC11_00022919	chr13	+	3225	2	FSM	ENSG00000188811.14	ENST00000473371.1	3237	2	12	0	7	0	multi-exon	FALSE	canonical	3	141	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTAGCATTCTGAGTT	39036817	True	NA	NA	False	ATTAAA	-22	NA	39038317	39041817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39039289_39039563
WTC11_00022920	chr13	+	3516	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	-108	3	37	-3	multi-exon	FALSE	canonical	3	66	junction_3	28.008431270284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCTATAACTTTTT	39036847	True	NA	32	True	ATTAAA	-20	NA	39038347	39050106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
WTC11_00022921	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.6680208118446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036890	True	NA	35	True	ATTAAA	-23	NA	39038390	39050109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
WTC11_00022922	chr13	+	2009	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-47	4828	18	817	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	39036908	True	NA	7	True	ATTAAA	-14	NA	39038408	39045281	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
WTC11_00022924	chr13	+	3595	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	-21	0	-10	0	multi-exon	FALSE	canonical	3	136	junction_12	17.6211853415003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	NA	False	NA	13	True	AATAAA	-14	NA	39655640	39752628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
WTC11_00022926	chr13	+	415	4	FSM	ENSG00000133103.17	ENST00000537156.1	530	4	115	0	115	0	multi-exon	FALSE	canonical	3	163	junction_1	14.7648230602334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGACCAATTGAAATGCA	NA	False	NA	NA	False	NA	NA	NA	39679461	39687593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39679621_39679974_39680046_39682170_39682265_39687502
WTC11_00022927	chr13	+	2783	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.8377569248198	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	NA	False	NA	9	True	ATTAAA	-15	NA	40789392	40812460	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810197_40811452
WTC11_00022928	chr13	+	2780	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.8377569248198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	NA	False	NA	9	True	ATTAAA	-15	NA	40789392	40812460	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810188_40811446
WTC11_00022929	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	24.5860168026914	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	40789450	True	NA	9	True	ATTAAA	-15	NA	40789610	40812460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
WTC11_00022930	chr13	+	2401	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	225	junction_8	23.7133082393478	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	41057342	True	NA	NA	False	ATTAAA	-19	NA	41061495	41084006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
WTC11_00022931	chr13	+	532	4	FSM	ENSG00000278390.6	ENST00000615685.4	515	4	-17	0	3	0	multi-exon	FALSE	canonical	2	2	junction_3	5.35412613473634	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATGAGGGACAGGAG	41132634	True	NA	NA	False	CATAAA	-35	NA	41132941	41192835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41192639
WTC11_00022932	chr13	+	1764	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	-13	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	8.0876448982383	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	41308639	True	NA	8	True	AATAAA	-22	NA	41311266	41358718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
WTC11_00022933	chr13	+	1655	10	FSM	ENSG00000172766.19	ENST00000476980.5	1642	10	-15	2	0	-2	multi-exon	FALSE	canonical	1	4	junction_8	32.9140294302192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTTTTTGTCTGTGT	41308639	True	NA	6	True	AATAAA	-20	NA	41311266	41358716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41355143_41355217_41358303
WTC11_00022934	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	10.7654417857376	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308639	True	NA	14	True	AATAAA	-18	NA	41311266	41377030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
WTC11_00022935	chr13	+	4026	18	NIC	ENSG00000172766.19	novel	4285	20	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	27.0005766951099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308718	True	NA	14	True	AATAAA	-18	NA	41311345	41377030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
WTC11_00022938	chr13	+	1691	1	FSM	ENSG00000229696.1	ENST00000451871.1	1752	1	14	47	14	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCACTGATATGCTGG	NA	False	NA	NA	False	TATAAA	-22	NA	41925611	41927302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41925600_41927300
WTC11_00022939	chr13	+	776	2	FSM	ENSG00000102780.17	ENST00000611224.1	777	2	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGTTTTGCATTTTTGT	42048767	False	NA	7	True	AATAAA	-17	NA	42048821	42066722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42048966_42066090
WTC11_00022940	chr13	+	9936	13	FSM	ENSG00000023516.9	ENST00000025301.4	9915	13	-21	0	-21	0	multi-exon	FALSE	canonical	2	3	junction_1	4.29793231940921	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	42271662	True	NA	7	True	AATAAA	-12	NA	42272130	42323261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
WTC11_00022941	chr13	+	1660	4	FSM	ENSG00000283554.1	ENST00000637043.1	824	4	-4	-832	-4	832	multi-exon	TRUE	canonical	2	3	junction_3	4.02768199119819	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGCTACACTCAGTGA	42424849	True	NA	NA	False	AATAAA	-13	NA	42424887	42486788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42424979_42435199_42435294_42437317_42437473_42485468
WTC11_00022942	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	7.11951543294907	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42573791	True	NA	13	True	AATAAA	-18	NA	42574151	42608013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
WTC11_00022943	chr13	+	7295	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	164	0	-164	multi-exon	FALSE	canonical	3	680	junction_3	61.5922072993005	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATCCAATATGTGA	43016870	True	NA	NA	False	NA	NA	NA	43023585	43114049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
WTC11_00022944	chr13	+	4099	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	-71	0	-71	0	multi-exon	FALSE	canonical	3	23	junction_5	6.21825270205921	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	43879382	True	NA	7	True	AATAAA	-20	NA	43879832	43893932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
WTC11_00022945	chr13	+	3259	1	FSM	ENSG00000179611.3	ENST00000378718.2	2776	1	24	-507	24	507	mono-exon	FALSE	NA	NA	NA	NA	NA	914	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTCTGTGAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	43968447	43971706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_43968400_43971700
WTC11_00022947	chr13	+	725	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	-23	4	-1	-4	multi-exon	FALSE	canonical	3	12	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	44142067	True	NA	4	True	NA	NA	NA	44142319	44148030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
WTC11_00022948	chr13	+	851	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	-53	4	-53	0	multi-exon	FALSE	canonical	3	8	junction_2	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACCATGTGTGGGTTA	NA	False	NA	0	True	AATAAA	-15	NA	44373770	44397710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44374110_44379640_44379714_44397271
WTC11_00022949	chr13	+	962	4	FSM	ENSG00000151778.11	ENST00000493476.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACCATGTGTGGGTTA	44373694	True	NA	0	True	AATAAA	-15	NA	44373881	44397710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44374110_44379640_44379714_44390356_44390579_44397271
WTC11_00022950	chr13	+	230	1	FSM	ENSG00000225727.3	ENST00000422303.1	222	1	-103	95	-103	-95	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGAAGAGTTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	44452497	44452727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44452500_44452700
WTC11_00022951	chr13	+	258	1	NIC	ENSG00000278156.2	novel	2845	3	NA	NA	-387	-1678	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGCGACCGCCGGCGA	44577082	False	NA	NA	False	NA	NA	NA	44577102	44577360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_44577100_44577400
WTC11_00022952	chr13	+	232	1	FSM	ENSG00000230793.1	ENST00000412207.1	1225	1	-64	1057	-64	-1057	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCATTCCAAAACCCTG	NA	False	NA	NA	False	NA	NA	NA	44594793	44595025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44594800_44595000
WTC11_00022953	chr13	+	1264	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	-497	132	-497	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAATTCCTTAACGCTCTA	NA	False	NA	NA	False	NA	NA	NA	44989031	44990295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989000_44990300
WTC11_00022954	chr13	+	3438	8	FSM	ENSG00000133114.18	ENST00000379151.9	3442	8	4	0	4	0	multi-exon	FALSE	canonical	3	87	junction_5	15.4774358473283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	44986889	True	NA	26	True	AATAAA	-19	NA	44989541	45030305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
WTC11_00022955	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	50.6045089545449	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	45116031	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
WTC11_00022957	chr13	+	1759	9	FSM	ENSG00000170919.16	ENST00000522673.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	31.2247397907493	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGACCCTGTCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	45377005	45391722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383236_45383759_45383839_45389734_45389821_45390713_45390903_45391031
WTC11_00022959	chr13	+	2558	2	FSM	ENSG00000170919.16	ENST00000379050.3	2558	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGGACCCTGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	45389032	45391719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45390903_45391031
WTC11_00022960	chr13	+	702	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	3	-174	3	18	multi-exon	FALSE	canonical	3	13	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTGCTGGTTTTCGG	45462383	True	NA	23	True	AATAAA	-37	NA	45464900	45465832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45465211_45465440
WTC11_00022962	chr13	+	4486	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	69	0	-69	multi-exon	FALSE	canonical	3	40	junction_13	8.6945408919801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTCTGATACGTGT	45462421	True	NA	26	True	AATAAA	-44	NA	45464938	45536632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
WTC11_00022964	chr13	+	410	1	FSM	ENSG00000205105.6	ENST00000378775.3	192	1	-74	-144	-74	144	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCATCAAAGACTGTAG	NA	False	NA	NA	False	AGTAAA	-22	NA	46490855	46491265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_46490900_46491300
WTC11_00022965	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_9	7.61253028131584	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	46551923	True	NA	5	True	ATTAAA	-18	NA	46553167	46753040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
WTC11_00022966	chr13	+	4131	19	FSM	ENSG00000136141.15	ENST00000389798.7	4131	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	11.1942721243974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAGTTTTTATCAGCC	46551955	True	NA	NA	False	AATAAA	-17	NA	46553199	46743595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46741641
WTC11_00022967	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	4.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	48030987	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48037905_48040919_48041117_48045659
WTC11_00022968	chr13	+	1135	6	FSM	ENSG00000136156.15	ENST00000650479.1	908	6	-108	-119	-105	56	multi-exon	FALSE	canonical	0	0	junction_1	708.040846279365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGATTTAGGTGAAGCC	NA	False	NA	NA	False	ATTAAA	-29	NA	48233097	48258997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48233478_48239225_48239333_48253807_48253937_48256176_48256384_48258125_48258237_48258796
WTC11_00022969	chr13	+	5768	6	FSM	ENSG00000136156.15	ENST00000647800.2	10089	6	0	4321	0	2841	multi-exon	FALSE	canonical	3	1335	junction_3	80.4596793431344	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTAGTCTTGCCCACTG	48214176	True	NA	NA	False	AATGAA	-21	NA	48233205	48266036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48233478_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
WTC11_00022970	chr13	+	4787	27	FSM	ENSG00000139687.16	ENST00000267163.6	4768	27	-19	0	-12	0	multi-exon	FALSE	canonical	3	91	junction_4	11.8109491875149	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGATGTTGTGTTCTT	48302575	True	NA	9	True	AATAAA	-21	NA	48303731	48481890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48304050_48307279_48307407_48342598_48342715_48345079_48345200_48347824_48347864_48348955_48349024_48360016_48360128_48362814_48362958_48364893_48364972_48367493_48367604_48368526_48368605_48373404_48373493_48376917_48377035_48379593_48379651_48380052_48380085_48380164_48380242_48381246_48381444_48452992_48453112_48456203_48456350_48459687_48459834_48463730_48463836_48464997_48465112_48465204_48465369_48473359_48473391_48476700_48476844_48477354_48477405_48479997
WTC11_00022972	chr13	+	6286	26	FSM	ENSG00000102531.16	ENST00000492622.6	6286	26	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.6974099836824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGATTTTGTGCAAC	48974623	True	NA	32	True	AATAAA	-19	NA	48975911	49209779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
WTC11_00022973	chr13	+	6311	27	NNC	ENSG00000102531.16	novel	6286	26	NA	NA	-3	41638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	30.3188187307944	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGTATAAAAACTGGACA	48974620	True	NA	NA	False	AAAAAG	-18	NA	48975908	49251417	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080_49209775_49251390
WTC11_00022974	chr13	+	2037	8	FSM	ENSG00000102531.16	ENST00000378383.5	2037	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	23.0270470959518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAAGTTGATTATTCT	48974780	False	NA	NA	False	AATAAA	-18	NA	48976068	49146847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777
WTC11_00022975	chr13	+	6328	26	FSM	ENSG00000102531.16	ENST00000541916.5	6328	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	25.4971684702439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	48976341	True	NA	31	True	AATAAA	-18	NA	48976608	49209778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
WTC11_00022976	chr13	+	5719	24	FSM	ENSG00000102531.16	ENST00000398316.7	5714	24	-5	0	-5	0	multi-exon	FALSE	canonical	3	30	junction_1	23.7759707770138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGTTTATTGTATTCAT	49108971	True	NA	16	True	AATAAA	-21	NA	49110307	49209593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49110407_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
WTC11_00022978	chr13	+	703	6	FSM	ENSG00000102543.14	ENST00000496061.5	688	6	-15	0	1	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5177317930167	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAAGTTTGCTTACG	49247145	True	NA	NA	False	NA	NA	NA	49247925	49267525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
WTC11_00022979	chr13	+	829	5	ISM	ENSG00000102543.14	ENST00000251108.10	3386	10	10	25700	-1	0	5prime_fragment	FALSE	canonical	3	29	junction_4	5.2618912949623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	49247154	True	NA	11	True	AATAAA	-17	NA	49247934	49267785	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489
WTC11_00022981	chr13	+	644	6	FSM	ENSG00000102543.14	ENST00000484126.5	644	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	16.292329483533	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTGTAGAGGAGACC	49247196	True	NA	NA	False	NA	NA	NA	49247976	49267657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49265878_49266004_49267489
WTC11_00022982	chr13	+	1706	10	FSM	ENSG00000136147.18	ENST00000378319.8	1356	10	-350	0	-7	0	multi-exon	FALSE	canonical	3	41	junction_2	6.23609564462324	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTGTACCAAATTTG	49495469	True	NA	14	True	AATAAA	-15	NA	49495602	49528976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49496096_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
WTC11_00022984	chr13	+	418	1	FSM	ENSG00000276436.1	ENST00000615830.1	422	1	-259	263	-259	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGCACAAAGCTCCG	49792611	False	NA	NA	False	NA	NA	NA	49792626	49793044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49792600_49793000
WTC11_00022985	chr13	+	2625	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	103	junction_1	65	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	49996990	False	NA	NA	False	NA	NA	NA	49997000	50014331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997132_49997666_49997764_50011934
WTC11_00022986	chr13	+	2710	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	-58	-1163	-18	0	multi-exon	FALSE	canonical	3	91	junction_1	71	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	49996990	False	NA	NA	False	NA	NA	NA	49997000	50014331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997217_49997666_49997764_50011934
WTC11_00022987	chr13	+	6812	4	Fusion	ENSG00000204977.10_ENSG00000198553.9	novel	1637	4	NA	NA	-18	0	multi-exon	FALSE	non_canonical	0	0	junction_3	95.8783952028123	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	49996990	False	NA	10	True	AATAAA	-17	NA	49997000	50018467	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr13_+_49997217_49997666_49997764_50011934_50015093_50015126
WTC11_00022988	chr13	+	7272	2	FSM	ENSG00000204977.10	ENST00000378182.4	7255	2	-17	0	6	0	multi-exon	FALSE	canonical	3	233	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	49993526	True	NA	10	True	AATAAA	-17	NA	49997024	50018467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997764_50011934
WTC11_00022989	chr13	+	505	3	NIC	ENSG00000204977.10	novel	478	3	NA	NA	5	-13	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAGAAATTGCCAT	49993565	True	NA	NA	False	GATAAA	-22	NA	49997063	50020468	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_49997217_49997666_49997764_50020213
WTC11_00022990	chr13	+	2968	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	-11	0	-11	0	multi-exon	TRUE	canonical	3	72	junction_2	4.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	50080648	True	NA	15	True	AATAAA	-21	NA	50082157	50107218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50082558_50083141_50083195_50104703
WTC11_00022991	chr13	+	2899	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	50080648	True	NA	-1	True	AATAAA	-5	NA	50082157	50107202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50082558_50104703
WTC11_00022992	chr13	+	543	1	FSM	ENSG00000232150.3	ENST00000495613.1	1093	1	177	373	177	-373	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAGATCAAAGAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	50172265	50172808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50172300_50172800
WTC11_00022993	chr13	+	233	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTTCTTTACTAAT	NA	False	NA	NA	False	TTTAAA	-43	NA	50173238	50173471	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_50173200_50173500
WTC11_00022994	chr13	+	1020	4	FSM	ENSG00000176124.15	ENST00000460525.6	1031	4	0	11	0	-11	multi-exon	FALSE	canonical	0	0	junction_2	6.37704215656966	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTAACAGTACATGAT	50415079	True	NA	NA	False	AATATA	-13	NA	50415089	50533850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50415203_50433412_50433551_50492650_50492762_50533192
WTC11_00022995	chr13	+	1246	10	FSM	ENSG00000136104.21	ENST00000616907.2	3410	10	-355	2519	-95	0	multi-exon	FALSE	canonical	3	404	junction_4	28.1034245090488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGGGTTCAGGTGTA	NA	False	NA	12	True	ACTAAA	-18	NA	50909651	50953984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904
WTC11_00022996	chr13	+	4885	10	FSM	ENSG00000136104.21	ENST00000422660.6	4885	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	129.448497790615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGGTACTTTTCCT	50909708	False	NA	NA	False	AATAAA	-16	NA	50909746	50973745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
WTC11_00022997	chr13	+	1513	11	FSM	ENSG00000136104.21	ENST00000336617.8	1513	11	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_10	28.0864736127553	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTATGACTGCTTT	50909063	True	NA	7	True	AATAAA	-17	NA	50909790	50956762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
WTC11_00023001	chr13	+	1224	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10153	0	multi-exon	FALSE	canonical	3	46	junction_2	44	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	51170006	False	NA	6	True	AATAAA	-14	NA	51170024	51180967	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_51170463_51175948_51176044_51180276
WTC11_00023002	chr13	+	18112	2	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-9966	9210	multi-exon	FALSE	canonical	3	99	junction_1	0	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCACAAATGGAAAATAT	51152841	True	NA	66	True	NA	NA	NA	51170211	51190177	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_51170463_51172316
WTC11_00023003	chr13	+	354	2	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTACACATGATTGATT	51170190	False	NA	NA	False	AATAAA	-9	NA	51170408	51187636	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170463_51187336
WTC11_00023005	chr13	+	3226	2	NIC	ENSG00000150510.17	novel	2383	3	NA	NA	-8	904	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAATGTATCTTCCCTT	51211673	True	NA	8	True	GATAAA	-23	NA	51222362	51254486	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_51222570_51251467
WTC11_00023008	chr13	+	4728	4	FSM	ENSG00000150510.17	ENST00000322475.13	4728	4	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_3	36.0370180046389	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGGTTGTCTCATAAA	51211708	True	NA	17	True	AATAAA	-18	NA	51222397	51284239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51222570_51231347_51231380_51251467_51252202_51280449
WTC11_00023009	chr13	+	917	2	FSM	ENSG00000236778.8	ENST00000598905.1	906	2	-11	0	-11	0	multi-exon	FALSE	canonical	2	8	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAAGGTTTCAGCTT	51453088	True	NA	NA	False	AATAAA	-30	NA	51453329	51454830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51453419_51454002
WTC11_00023010	chr13	+	797	1	FSM	ENSG00000224892.6	ENST00000427198.2	791	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1756	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCCAGGGTGACATGTT	51460277	False	NA	NA	False	NA	NA	NA	51460518	51461315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51460500_51461300
WTC11_00023011	chr13	+	10761	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	-115	-1277	-108	1277	multi-exon	FALSE	canonical	3	152	junction_5	21.6996781786701	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACTAACCTCAGCA	51584297	False	NA	NA	False	NA	NA	NA	51584346	51768986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
WTC11_00023012	chr13	+	6349	2	FSM	ENSG00000139668.9	ENST00000612477.1	6932	2	0	583	0	-583	multi-exon	FALSE	canonical	3	21	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGGAGGGATAGCATTA	51579317	True	NA	NA	False	AAAAAG	-17	NA	51584454	51592003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51584825_51586024
WTC11_00023013	chr13	+	1319	9	NIC	ENSG00000139668.9	novel	9369	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	56.3802658294549	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACATTGTGCTGAAGGA	51579323	True	NA	NA	False	NA	NA	NA	51584460	51753123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51752862
WTC11_00023014	chr13	+	1890	1	FSM	ENSG00000231856.3	ENST00000618844.1	1793	1	-80	-17	-80	17	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCAGAAGTGTTGGTTT	NA	False	NA	23	True	ATTAAA	-35	NA	51803757	51805647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51803800_51805600
WTC11_00023015	chr13	+	423	1	FSM	ENSG00000236044.1	ENST00000439042.1	408	1	7	-22	7	22	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTTAACTAAGAGAATG	NA	False	NA	NA	False	AATAAA	-22	NA	51966748	51967171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51966700_51967200
WTC11_00023016	chr13	+	2005	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	-22	0	-2	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	52004695	True	NA	9	True	ATTAAA	-14	NA	52012388	52017713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52015782
WTC11_00023018	chr13	+	6061	4	FSM	ENSG00000253710.5	ENST00000680793.1	6052	4	-9	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_2	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGCCACTGCACTCT	52004695	True	NA	NA	False	NA	NA	NA	52012388	52032171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52015782_52017686_52018912_52019144_52028318
WTC11_00023020	chr13	+	6510	4	FSM	ENSG00000253710.5	ENST00000521508.2	6510	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.9652400197707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCTGTCAGGTTTAA	52004704	True	NA	31	True	AATAAA	-27	NA	52012397	52033600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028318
WTC11_00023023	chr13	+	10399	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	-23	-3872	-3	3812	multi-exon	FALSE	canonical	3	9	junction_2	66.8183170994301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTTATTATATTTATTA	52004694	True	NA	NA	False	NA	NA	NA	52012387	52037412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
WTC11_00023024	chr13	+	10633	3	FSM	ENSG00000253710.5	ENST00000649651.2	10733	3	100	0	100	0	multi-exon	FALSE	canonical	3	158	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52006971	False	NA	-29	True	NA	NA	NA	52014664	52033540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52019144_52024005_52024938_52028318
WTC11_00023028	chr13	+	1985	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	-13	0	-3	0	multi-exon	FALSE	canonical	3	522	junction_2	48.2012447972041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	52455399	False	NA	9	True	ATTAAA	-19	NA	52455425	52465843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
WTC11_00023029	chr13	+	3391	9	FSM	ENSG00000136108.15	ENST00000378037.9	3629	9	-41	279	-3	0	multi-exon	FALSE	canonical	3	205	junction_2	150.982149193208	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	52455399	False	NA	10	True	ATTAAA	-15	NA	52455425	52476349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52455627_52456522_52456608_52460895_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
WTC11_00023030	chr13	+	3625	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	-11	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	62.6039136156838	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	52448054	True	NA	21	True	AATAAA	-18	NA	52455466	52476627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
WTC11_00023032	chr13	+	784	6	NIC	ENSG00000244471.6	novel	865	4	NA	NA	126	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	6.51152823843988	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAATGTCAGGTTTTT	52570181	True	NA	NA	False	ATTAAA	-8	NA	52570278	52587087	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52584632_52584704_52586809
WTC11_00023033	chr13	+	753	6	FSM	ENSG00000273784.5	ENST00000398039.2	825	6	72	0	72	0	multi-exon	FALSE	canonical	2	4	junction_1	33.5475781540188	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCGAACAGCTGAGGA	52600178	False	NA	NA	False	NA	NA	NA	52600209	52642515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52600221_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
WTC11_00023035	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	21.1660104885167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615551	True	NA	-18	True	NA	NA	NA	52617524	52643773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
WTC11_00023036	chr13	+	1220	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	-3	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	146.118295271392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	52648436	True	NA	26	True	AATAAA	-33	NA	52652835	52687872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
WTC11_00023037	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_5	52.1111925490953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	52648436	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
WTC11_00023038	chr13	+	486	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCTGGGTGACTGTTA	54268539	False	NA	9	True	CATAAA	-19	NA	54269345	54342276	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54335030_54335144_54341965
WTC11_00023039	chr13	+	1373	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTTTGTTCAGATTTT	54268539	False	NA	3	True	AATAAA	-16	NA	54269345	54354415	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54353104
WTC11_00023040	chr13	+	1580	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGGGGAGAAGGGCAAG	54268539	False	NA	109	True	NA	NA	NA	54269345	54354521	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54335042_54335144_54353104
WTC11_00023041	chr13	+	3543	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23226	-84891	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAAAAATTAGCCAGGT	55037505	True	NA	NA	False	ACTAAA	-2	NA	55039718	55076599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_55039882_55062871_55063003_55073350
WTC11_00023042	chr13	+	5217	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-10323	-84891	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAAAAATTAGCCAGGT	NA	False	NA	NA	False	ACTAAA	-2	NA	55052621	55076599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_55054459_55062871_55063003_55073350
WTC11_00023043	chr13	+	2724	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCGTGCTGTGGGATG	NA	False	NA	NA	False	TTTAAA	-44	NA	55654968	55657692	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55655000_55657700
WTC11_00023044	chr13	+	1488	2	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGAGATAAGGATGGGG	55658616	False	NA	NA	False	NA	NA	NA	55658931	55660461	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55659634_55659675
WTC11_00023046	chr13	+	388	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTCTGCAGAAAAGGAAGA	56116090	False	NA	NA	False	NA	NA	NA	56116112	56116500	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56116100_56116500
WTC11_00023047	chr13	+	945	1	FSM	ENSG00000238213.1	ENST00000448913.1	1231	1	322	-36	322	36	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGAATTCAAATTTTTC	60275044	False	NA	NA	False	NA	NA	NA	60275097	60276042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60275100_60276000
WTC11_00023048	chr13	+	2877	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	-232	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	7.94209815331711	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	60396656	True	NA	20	True	AATAAA	-16	NA	60396987	60573871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
WTC11_00023049	chr13	+	719	2	FSM	ENSG00000083544.16	ENST00000463109.2	723	2	0	4	0	-4	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTTAAGTATATAGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	60444686	60461036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60444749_60460379
WTC11_00023050	chr13	+	5344	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	66141365	66146709	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66141400_66146700
WTC11_00023051	chr13	+	348	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGACATGAGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	66228121	66228469	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66228100_66228500
WTC11_00023052	chr13	+	270	1	FSM	ENSG00000232380.1	ENST00000411421.1	1007	1	431	306	431	-306	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTGGAAAAAATAGGACAA	NA	False	NA	NA	False	NA	NA	NA	68985488	68985758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_68985500_68985800
WTC11_00023053	chr13	+	449	1	FSM	ENSG00000236534.1	ENST00000440551.1	403	1	-1	-45	-1	45	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTTTTTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	71675065	71675514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_71675100_71675500
WTC11_00023054	chr13	+	2662	11	FSM	ENSG00000136122.18	ENST00000652266.1	2829	11	165	2	-9	0	multi-exon	TRUE	canonical	3	27	junction_2	32.552112066654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	72726140	True	NA	NA	False	AATAAA	-16	NA	72727913	72756196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
WTC11_00023055	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	14.2411346933934	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	72726149	True	NA	NA	False	AATAAA	-16	NA	72727922	72756196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
WTC11_00023056	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_8	16.5169515523088	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	72779525	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
WTC11_00023057	chr13	+	696	7	FSM	ENSG00000118939.18	ENST00000471792.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	620.024103474122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTATTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	75549482	75594990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914
WTC11_00023058	chr13	+	1123	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	-282	90	26	0	multi-exon	FALSE	canonical	3	1415	junction_1	137.923665482034	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCCTTAACCTGTG	75548434	True	NA	3	True	ATTAAA	-14	NA	75549508	75605930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
WTC11_00023059	chr13	+	931	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	547.947519727026	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCCTTAACCTGTG	75548434	True	NA	3	True	ATTAAA	-14	NA	75549508	75605930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
WTC11_00023060	chr13	+	1236	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	26	0	intron_retention	FALSE	canonical	3	1675	junction_7	78.5937630593976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCCTTAACCTGTG	75548434	True	NA	3	True	ATTAAA	-14	NA	75549508	75605930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
WTC11_00023061	chr13	+	832	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	607.939477385097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	75540977	True	NA	6	True	ATTAAA	-17	NA	75549790	75605933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549863_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
WTC11_00023063	chr13	+	386	6	FSM	ENSG00000261553.5	ENST00000570285.1	386	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	864.83394937988	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATATTTTTCTGTATTTT	75566812	False	NA	NA	False	NA	NA	NA	75566831	75623320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75621762_75621869_75623270
WTC11_00023066	chr13	+	3472	24	FSM	ENSG00000136153.20	ENST00000377499.9	3472	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	34.1467421579277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATGGTAAATGCG	75635646	True	NA	NA	False	AATAAA	-36	NA	75636322	75845368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326
WTC11_00023067	chr13	+	5675	28	NIC	ENSG00000136153.20	novel	7147	31	NA	NA	0	-368	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	31.6641324522024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGATAATTCCATTAC	75635646	True	NA	NA	False	NA	NA	NA	75636322	75859498	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75856505_75856609_75857920
WTC11_00023072	chr13	+	207	1	FSM	ENSG00000228002.2	ENST00000436565.2	3076	1	408	2461	408	-2461	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTACTGCAGAAATAACCA	NA	False	NA	NA	False	AATATA	-35	NA	76985275	76985482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76985300_76985500
WTC11_00023075	chr13	+	5236	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	-16	23	6	-23	multi-exon	FALSE	canonical	3	72	junction_3	16.4991582276861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAAGAATAGATTCC	76990591	True	NA	NA	False	TTTAAA	-27	NA	76992064	77005094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
WTC11_00023076	chr13	+	2664	5	FSM	ENSG00000102805.16	ENST00000636780.2	2683	5	19	0	4	0	multi-exon	FALSE	canonical	1	1	junction_3	51.5285115251741	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTGTTGGGTCTAAT	76990589	True	NA	-26	True	TATAAA	-19	NA	76992062	77002477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_76998042_76998086_77000457
WTC11_00023077	chr13	+	566	1	FSM	ENSG00000102805.16	ENST00000636405.1	2511	1	-10	1955	-10	-1955	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACAGAGAAGACACAGC	76990873	False	NA	NA	False	NA	NA	NA	76992346	76992912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76992300_76992900
WTC11_00023078	chr13	+	3014	7	FSM	ENSG00000139737.22	ENST00000418532.6	3009	7	-5	0	-5	0	multi-exon	TRUE	canonical	3	126	junction_2	63.4192399828317	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGGTCATGCATGAATG	77695241	True	NA	39	True	AATAAA	-17	NA	77697681	77764229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_77698540_77719531_77719672_77744282_77744433_77746513_77746856_77753202_77753359_77760827_77761111_77763144
WTC11_00023083	chr13	+	1510	5	FSM	ENSG00000227354.7	ENST00000656910.1	1502	5	-8	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.74536878161602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGAAATGATTTTGAAAA	79406012	True	NA	3	True	AATAAA	-15	NA	79406292	79422947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_79406478_79412681_79412908_79417834_79417917_79420759_79420816_79421986
WTC11_00023084	chr13	+	4625	8	FSM	ENSG00000102471.15	ENST00000218652.12	4624	8	-3	2	-3	-2	multi-exon	FALSE	canonical	3	262	junction_7	15.7519030272406	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGTTCATTTCTACT	79480827	False	NA	NA	False	AATAAA	-24	NA	79481151	79556075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
WTC11_00023085	chr13	+	2546	8	NNC	ENSG00000102471.15	novel	4648	8	NA	NA	23	-71	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	99.3548577327855	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTGTATTTTCTAAT	79480853	False	NA	6	True	AATAAA	-19	NA	79481177	79554025	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_79481522_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
WTC11_00023087	chr13	+	553	1	FSM	ENSG00000214182.5	ENST00000393073.4	333	1	-132	-88	25	88	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAAGTAGAGAGGCCC	81689859	False	NA	NA	False	NA	NA	NA	81689935	81690488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_81689900_81690500
WTC11_00023088	chr13	+	642	3	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	6.5	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTGTTGCTTCCATT	86358149	True	NA	20	True	AATAAA	-22	NA	86358372	86365250	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_86358765_86364054_86364156_86365101
WTC11_00023089	chr13	+	5075	2	FSM	ENSG00000165300.8	ENST00000683689.1	5075	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGGGATGGAAGTAATG	87670970	True	NA	6	True	AATAAA	-21	NA	87671370	87679616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_87672210_87675380
WTC11_00023090	chr13	+	408	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTCTTATATTAATAAGA	90848609	False	NA	NA	False	NA	NA	NA	90848620	90849028	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_90848600_90849000
WTC11_00023092	chr13	+	7121	9	FSM	ENSG00000183098.11	ENST00000377047.9	7121	9	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_2	11.4564392373896	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACCAAGAATACAGCATT	93223777	True	NA	NA	False	AATAAA	-19	NA	93226806	94408020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_93227617_93545262_93545422_93830153_93830546_94027728_94027895_94286348_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
WTC11_00023093	chr13	+	8905	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	68	junction_4	16.8999815088656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	94599686	True	NA	27	True	AATAAA	-38	NA	94601835	94634661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
WTC11_00023094	chr13	+	3453	9	NNC	ENSG00000152749.8	novel	8884	9	NA	NA	26	-5380	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.9944191979235	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTGTCAGATAA	94599733	True	NA	9	True	ATTAAA	-16	NA	94601882	94629281	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_94602073_94605415_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
WTC11_00023095	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	43.2695042726399	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	95547316	True	NA	9	True	AATAAA	-19	NA	95552719	95579759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
WTC11_00023096	chr13	+	1009	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	21	-1526	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	321.88917347435	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTAAAATGTTTT	95547337	True	NA	16	True	AATAAA	-12	NA	95552740	95578233	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
WTC11_00023097	chr13	+	5613	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	-23	0	-23	0	multi-exon	FALSE	canonical	3	45	junction_4	7.92944090449328	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	95673091	True	NA	21	True	AATAAA	-23	NA	95677115	95794988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
WTC11_00023098	chr13	+	6999	1	FSM	ENSG00000185352.9	ENST00000620595.1	7073	1	72	2	72	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGTCTTCCCCTGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	96832559	96839558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_96832600_96839600
WTC11_00023099	chr13	+	5121	2	FSM	ENSG00000125249.7	ENST00000245304.5	5540	2	-116	535	-116	-535	multi-exon	FALSE	canonical	3	126	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGTTGAGAAGCTTC	97434030	False	NA	NA	False	NA	NA	NA	97434052	97468593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_97434785_97464204
WTC11_00023100	chr13	+	203	1	FSM	ENSG00000276573.1	ENST00000613261.1	223	1	-43	63	-43	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCATGTTATTCATCCTT	97435808	False	NA	NA	False	ACTAAA	-3	NA	97435902	97436105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_97435900_97436100
WTC11_00023101	chr13	+	684	6	FSM	ENSG00000065150.21	ENST00000475420.5	883	6	199	0	199	0	multi-exon	FALSE	canonical	3	90	junction_1	417.783388851208	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATCAAACGAATGTTAG	97975804	False	NA	NA	False	NA	NA	NA	97975829	97990170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_97975998_97976692_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125
WTC11_00023102	chr13	+	4457	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	-417	-621	-250	0	multi-exon	FALSE	canonical	3	997	junction_14	157.561599382591	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGTCTGGCTTGGATT	97976163	False	NA	34	True	AATAAA	-37	NA	97976214	98022503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
WTC11_00023103	chr13	+	3688	16	FSM	ENSG00000065150.21	ENST00000491555.5	3688	16	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_4	172.945720450731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGTCTGGCTTGGATT	98001633	False	NA	34	True	AATAAA	-37	NA	98001645	98022503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
WTC11_00023104	chr13	+	10419	27	FSM	ENSG00000152767.17	ENST00000319562.11	10419	27	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.3846153846154	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTTGAAACTAATTT	98139487	True	NA	NA	False	NA	NA	NA	98143093	98455176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
WTC11_00023105	chr13	+	13532	13	FSM	ENSG00000152767.17	ENST00000596580.2	13532	13	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	23.7888571020598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTTTTTCTCCGG	98143401	False	NA	7	True	AATAAA	-20	NA	98143415	98407494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226
WTC11_00023107	chr13	+	529	1	FSM	ENSG00000269189.1	ENST00000595998.1	1051	1	399	123	399	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTAGTTATTATGGAAA	NA	False	NA	NA	False	NA	NA	NA	98234048	98234577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98234000_98234600
WTC11_00023111	chr13	+	256	1	NIC	ENSG00000224418.1	novel	1278	2	NA	NA	110	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTCTGGGTGAAGTTTC	98577300	False	NA	NA	False	NA	NA	NA	98577353	98577609	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_98577400_98577600
WTC11_00023112	chr13	+	990	1	FSM	ENSG00000260992.1	ENST00000562781.1	807	1	-185	2	-185	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTAAGGTTGTAGGGTTT	99087609	False	NA	NA	False	ATTAAA	-15	NA	99087633	99088623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99087600_99088600
WTC11_00023113	chr13	+	2253	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	6	0	-6	multi-exon	FALSE	canonical	3	485	junction_1	16.8962828752362	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATCCTCCGCACTGCT	99194649	True	NA	19	True	AATAAA	-34	NA	99200853	99386498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
WTC11_00023116	chr13	+	2547	7	FSM	ENSG00000134882.16	ENST00000376440.6	2525	7	-22	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	237.783106118907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	99194682	True	NA	16	True	AATAAA	-17	NA	99200886	99386427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99201568_99238426_99238555_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
WTC11_00023117	chr13	+	548	3	FSM	ENSG00000125304.10	ENST00000627052.2	562	3	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCGCGGAAAACCCGGAAAG	NA	False	NA	NA	False	NA	NA	NA	99498537	99501315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99498601_99500596_99500785_99501018
WTC11_00023119	chr13	+	3858	19	FSM	ENSG00000125304.10	ENST00000642475.1	3858	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	478.6307115352	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTCTTTCAATTT	99498932	False	NA	-44	True	TTTAAA	-7	NA	99498955	99563334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99499470_99500596_99500785_99501018_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
WTC11_00023120	chr13	+	2760	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	657	0	57	multi-exon	FALSE	canonical	3	1312	junction_3	160.328958706779	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGCATCATTACCTAT	99491788	True	NA	13	True	AATAAA	-16	NA	99501471	99563391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
WTC11_00023121	chr13	+	1305	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	-4	-120	-1	120	multi-exon	FALSE	canonical	3	50	junction_8	24.6056395974581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTATTTAAATTT	99605414	True	NA	-25	True	NA	NA	NA	99606685	99892690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
WTC11_00023122	chr13	+	1257	9	NNC	ENSG00000125246.16	novel	386	4	NA	NA	111762	12	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	34.2871604977723	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCTTAAGAAATTAACAG	NA	False	NA	23	True	ATTAAA	-34	NA	99718451	99892582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_99718584_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
WTC11_00023123	chr13	+	2963	3	FSM	ENSG00000043355.12	ENST00000376335.8	2963	3	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	19	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATACTATTTTTTCTA	99975571	True	NA	21	True	AATAAA	-17	NA	99981783	99986765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99983140_99984945_99985110_99985322
WTC11_00023124	chr13	+	1083	3	FSM	ENSG00000043355.12	ENST00000468291.1	383	3	-700	0	-300	0	multi-exon	FALSE	canonical	1	1	junction_1	211.5	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCGCGGTGCACCGGG	99983967	False	NA	NA	False	NA	NA	NA	99983988	99985492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99984738_99984945_99985110_99985322
WTC11_00023125	chr13	+	473	2	FSM	ENSG00000043355.12	ENST00000477213.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCGGCGGCGGCCGCGG	99984771	True	NA	NA	False	NA	NA	NA	99984788	99985474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99985110_99985322
WTC11_00023126	chr13	+	2375	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	43	0	-35	0	multi-exon	FALSE	canonical	3	64	junction_21	61.3643265954447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	100083241	True	NA	13	True	AATAAA	-16	NA	100089057	100530432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
WTC11_00023128	chr13	+	2502	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	-18	0	-18	0	multi-exon	FALSE	canonical	3	267	junction_10	29.9982986285042	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	100083258	True	NA	16	True	AATAAA	-19	NA	100089074	100530435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
WTC11_00023129	chr13	+	2448	24	Fusion	ENSG00000175198.17_ENSG00000280169.1	novel	2484	24	NA	NA	40	5	multi-exon	FALSE	canonical	2	4	junction_23	70.7935842361305	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTAATGTGTTGTTG	100083323	True	NA	NA	False	AATAAA	-23	NA	100089139	100539572	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100539223
WTC11_00023134	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	102394119	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102394600_102395700
WTC11_00023135	chr13	+	5172	31	NIC	ENSG00000134900.12	novel	5484	30	NA	NA	-50	314	combination_of_known_splicesites	FALSE	canonical	3	22	junction_27	92.7288100981686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGATTTTTTTATCTTG	102590611	True	NA	54	True	NA	NA	NA	102596935	102679470	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102667757_102667884_102674282_102674491_102676295_102676416_102678226
WTC11_00023136	chr13	+	5486	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	-1499	-39	2	multi-exon	FALSE	canonical	3	243	junction_8	43.1062255790677	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTATTCATTTGTGAC	102590622	True	NA	NA	False	AATAAA	-19	NA	102596946	102679960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
WTC11_00023137	chr13	+	5525	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	-39	-2	-39	2	multi-exon	FALSE	canonical	3	70	junction_24	70.5195767255149	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTATTCATTTGTGAC	102590622	True	NA	NA	False	AATAAA	-19	NA	102596946	102679960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
WTC11_00023142	chr13	+	3789	11	FSM	ENSG00000134897.14	ENST00000257336.6	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	9.1874914965947	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	102798873	True	NA	NA	False	AATAAA	-21	NA	102799118	102841533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102799522_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
WTC11_00023143	chr13	+	3756	11	NIC	ENSG00000134897.14	novel	1962	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	8.42614977317636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	102800126	True	NA	NA	False	AATAAA	-21	NA	102800365	102841533	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_102800736_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
WTC11_00023144	chr13	+	674	3	FSM	ENSG00000134897.14	ENST00000491929.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTCCCAAAGGAGATGGT	102800161	True	NA	NA	False	NA	NA	NA	102800400	102807400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102800736_102805306_102805391_102807145
WTC11_00023145	chr13	+	1402	7	FSM	ENSG00000134897.14	ENST00000490317.1	1855	7	453	0	453	0	multi-exon	FALSE	canonical	3	35	junction_6	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACTTAATAGCATCAAGA	NA	False	NA	NA	False	AATAAA	-35	NA	102820839	102840163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
WTC11_00023146	chr13	+	4071	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	-250	67	-49	0	multi-exon	TRUE	non_canonical	3	73	junction_8	12.0781891466074	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATGACAGCCATTTGT	NA	False	NA	-44	True	ATTAAA	-21	NA	102845781	102875928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
WTC11_00023147	chr13	+	4497	14	FSM	ENSG00000134899.24	ENST00000682869.1	4279	14	-218	0	-16	0	multi-exon	FALSE	non_canonical	3	73	junction_7	11.8476522528865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAACTGGTGGCACG	102845318	True	NA	0	True	AATGAA	-19	NA	102845814	102875972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102846355_102852117_102852294_102853756_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
WTC11_00023148	chr13	+	3994	15	FSM	ENSG00000134899.24	ENST00000651281.1	3994	15	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_1	26.6611388828499	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAAATTAACTGGTGG	102847908	False	NA	-4	True	AATGAA	-15	NA	102848738	102875968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102849195_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
WTC11_00023150	chr13	+	5323	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	-13	3	-13	-3	multi-exon	FALSE	canonical	3	140	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAATGTCTTCAGATAG	NA	False	NA	9	True	AATAAA	-18	NA	108218378	108234240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_108218660_108229198
WTC11_00023151	chr13	+	1404	1	FSM	ENSG00000275216.2	ENST00000618966.1	4205	1	-1212	4013	-1212	-4013	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTTTATTAGTCAAAT	109268301	False	NA	NA	False	NA	NA	NA	109268421	109269825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_109268400_109269800
WTC11_00023152	chr13	+	4014	4	FSM	ENSG00000134871.19	ENST00000649101.1	5158	4	0	1144	0	-1144	multi-exon	FALSE	canonical	3	220	junction_3	15.7691682300198	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTTACCATTTTCTTA	110296338	True	NA	NA	False	GATAAA	-22	NA	110307257	110361071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471
WTC11_00023153	chr13	+	6268	48	FSM	ENSG00000134871.19	ENST00000360467.7	6446	48	0	178	0	4	multi-exon	TRUE	canonical	3	200	junction_17	70.691917613931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGACCGCCTTAAT	110296364	True	NA	24	True	AATAAA	-28	NA	110307283	110513031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904_110485028_110485654_110485837_110489444_110489509_110489710_110489786_110491232_110491341_110492069_110492178_110493210_110493283_110495341_110495468_110501667_110501785_110503120_110503283_110503382_110503482_110503846_110503994_110504147_110504265_110506414_110506607_110507934_110508222_110511933
WTC11_00023156	chr13	+	1674	10	FSM	ENSG00000134871.19	ENST00000617564.2	1690	10	0	16	0	-16	multi-exon	FALSE	canonical	3	200	junction_5	19.0522348904528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTTAATGTAAAGGAC	110436269	False	NA	NA	False	TTTAAA	-45	NA	110436285	110459755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770
WTC11_00023161	chr13	+	2234	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	-18	0	-8	0	multi-exon	FALSE	canonical	3	14	junction_1	51.9326486903951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613588	True	NA	7	True	ATTAAA	-20	NA	110615536	110639993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
WTC11_00023162	chr13	+	2546	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	-34	3	-34	0	multi-exon	FALSE	canonical	3	127	junction_3	9.54521404218424	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613562	True	NA	7	True	ATTAAA	-20	NA	110615510	110639993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
WTC11_00023163	chr13	+	2309	5	NNC	ENSG00000213995.12	novel	2377	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	59.8748695196908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613642	True	NA	7	True	ATTAAA	-20	NA	110615590	110639993	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_110615648_110634544_110634596_110634671_110635136_110635467_110635589_110638377
WTC11_00023164	chr13	+	2457	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	-80	0	-34	0	multi-exon	FALSE	canonical	3	26	junction_3	42.5776863509515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613562	True	NA	7	True	ATTAAA	-20	NA	110615510	110639993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
WTC11_00023166	chr13	+	2692	10	FSM	ENSG00000213995.12	ENST00000309957.3	2692	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	55.9174877126894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613679	True	NA	7	True	ATTAAA	-20	NA	110615627	110639993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
WTC11_00023168	chr13	+	4739	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	-42	0	-42	0	multi-exon	FALSE	canonical	3	234	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	110711822	True	NA	NA	False	AATAAA	-19	NA	110713657	110723339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110714286_110719228
WTC11_00023169	chr13	+	4881	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	257	-2268	-198	0	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	110715225	False	NA	NA	False	AATAAA	-19	NA	110715238	110723339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110716009_110719228
WTC11_00023170	chr13	+	1291	1	FSM	ENSG00000277767.1	ENST00000620246.1	1824	1	495	38	495	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTTTACTTTCCTAAT	110916385	False	NA	NA	False	GGGGCT	-28	NA	110916498	110917789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110916500_110917800
WTC11_00023171	chr13	+	311	1	FSM	ENSG00000225760.2	ENST00000636375.1	159	1	-1	-151	-1	151	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACGTCGTGTTGCACA	NA	False	NA	NA	False	NA	NA	NA	110989978	110990289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110990000_110990300
WTC11_00023172	chr13	+	1681	16	FSM	ENSG00000102606.19	ENST00000466143.5	1681	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	22.863848222807	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACCACGGCACCCCG	111149433	True	NA	NA	False	NA	NA	NA	111153688	111283226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138
WTC11_00023173	chr13	+	4913	21	NIC	ENSG00000102606.19	novel	5233	21	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	88	junction_3	38.6534280497862	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAATGTGTCGCTTCGT	111149417	True	NA	20	True	ATTAAA	-20	NA	111153672	111305730	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
WTC11_00023174	chr13	+	1760	13	NIC	ENSG00000102606.19	novel	1681	16	NA	NA	-11	-41	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	52.4475266867329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGACTCATGTTGAAG	111149447	True	NA	NA	False	AATAAA	-19	NA	111153702	111281068	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280537
WTC11_00023175	chr13	+	5032	20	FSM	ENSG00000102606.19	ENST00000375736.8	5032	20	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	38.3904708859848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	111149482	True	NA	21	True	ATTAAA	-21	NA	111153737	111305731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
WTC11_00023177	chr13	+	5260	6	ISM	ENSG00000102606.19	ENST00000426073.6	4921	20	94330	6	-1644	0	3prime_fragment	FALSE	canonical	3	175	junction_3	26.4196896272458	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	111281168	False	NA	21	True	ATTAAA	-21	NA	111281183	111305731	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
WTC11_00023180	chr13	+	9086	30	FSM	ENSG00000068650.19	ENST00000375645.8	9086	30	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_29	31.6967648022609	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTACATTTTCTGC	112684012	True	NA	13	True	AATAAA	-45	NA	112690037	112887168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112690456_112785134_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286_112860415_112862439_112862576_112871734_112871801_112873572_112873677_112875775_112875942_112878216_112878304_112881875
WTC11_00023188	chr13	+	3648	30	FSM	ENSG00000126217.21	ENST00000375608.7	3648	30	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	10.2718112821185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCGGCGCCGGAGACC	112892836	True	NA	NA	False	NA	NA	NA	112894377	113096861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549
WTC11_00023190	chr13	+	6406	30	FSM	ENSG00000126217.21	ENST00000535094.7	6427	30	9	12	9	-5	multi-exon	FALSE	canonical	1	2	junction_1	12.9163594890149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAGAACCATTATGAAC	112969118	False	NA	-1	True	AATAAA	-12	NA	112969222	113099730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112969459_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
WTC11_00023194	chr13	+	5827	20	FSM	ENSG00000139842.15	ENST00000375440.9	5821	20	-13	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_3	239.04170407711	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGATTTTTGGACCCGT	113196461	True	NA	-1	True	AATATA	-10	NA	113209599	113267101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
WTC11_00023195	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	519.11231925278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	113196461	True	NA	35	True	CATAAA	-17	NA	113209599	113230212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
WTC11_00023196	chr13	+	708	4	NNC	ENSG00000139842.15	novel	866	4	NA	NA	1	-2165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	575.659814666807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGTAAAGAGTACTTC	113196478	True	NA	5	True	AATATA	-22	NA	113209616	113225852	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113209776_113209972_113210089_113218944_113219049_113225523
WTC11_00023200	chr13	+	2701	9	FSM	ENSG00000185896.11	ENST00000332556.5	2701	9	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_4	45.3484770968111	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGGAATACTATGCAG	113274516	True	NA	37	True	ATTAAA	-21	NA	113297238	113323672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113297496_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
WTC11_00023202	chr13	+	3058	13	FSM	ENSG00000150403.18	ENST00000434316.7	3058	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_11	63.0923045140126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	113488970	True	NA	3	True	ATTAAA	-16	NA	113491020	113550229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113547299_113547380_113548302_113548453_113549424
WTC11_00023203	chr13	+	2843	9	FSM	ENSG00000150403.18	ENST00000474393.5	2843	9	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	42.6079511359089	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTCTGCTTACCGAG	113489045	True	NA	4	True	AATAAA	-15	NA	113491095	113535286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044
WTC11_00023204	chr13	+	2825	3	FSM	ENSG00000150403.18	ENST00000622371.1	2822	3	-3	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	24	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGGGTCCTAATGAAAA	113500000	False	NA	2	True	ATTAAA	-15	NA	113500020	113506062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113500150_113501751_113501881_113503495
WTC11_00023207	chr13	+	2675	12	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	129.59587535524	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113584548	False	NA	12	True	AATAAA	-24	NA	113584558	113641473	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
WTC11_00023209	chr13	+	2671	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	-32	0	0	0	multi-exon	FALSE	canonical	3	399	junction_11	50.8946408063749	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578840	True	NA	12	True	AATAAA	-24	NA	113584720	113641473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
WTC11_00023210	chr13	+	2833	12	NNC	ENSG00000198176.13	novel	2639	12	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_11	112.954755807377	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113584536	False	NA	12	True	AATAAA	-24	NA	113584546	113641473	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637885_113640119
WTC11_00023211	chr13	+	447	3	FSM	ENSG00000198176.13	ENST00000464794.5	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	113578852	True	NA	26	True	AATAAA	-34	NA	113584732	113586180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113584889_113585773_113585850_113585965
WTC11_00023212	chr13	+	3186	12	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	146.236590824143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578864	True	NA	12	True	AATAAA	-24	NA	113584744	113641473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113585428_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
WTC11_00023213	chr13	+	2560	11	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	126	junction_10	126.409691084189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTGTTTCTCTAATT	113578869	True	NA	9	True	AATAAA	-21	NA	113584749	113641470	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113640119
WTC11_00023219	chr13	+	471	3	NIC	ENSG00000184497.13	novel	694	5	NA	NA	0	-17	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAACAGTCTCAGAGTG	113758831	True	NA	-8	True	NA	NA	NA	113759239	113799643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113759316_113795147_113795238_113799338
WTC11_00023221	chr13	+	2350	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	-19	0	-9	0	multi-exon	FALSE	canonical	3	303	junction_6	36.9713252769435	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	114230567	True	NA	8	True	AATAAA	-18	NA	114234877	114272723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
WTC11_00023222	chr13	+	2332	18	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_4	92.4200580395169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230577	True	NA	11	True	AATAAA	-15	NA	114234887	114272675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239309_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
WTC11_00023223	chr13	+	2190	17	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	47	junction_1	85.273983979582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230624	True	NA	11	True	AATAAA	-15	NA	114234934	114272675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
WTC11_00023224	chr13	+	2015	16	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	1	0	intron_retention	FALSE	canonical	1	8	junction_15	119.808105828538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230708	False	NA	11	True	AATAAA	-15	NA	114235018	114272675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114272183
WTC11_00023227	chr13	+	603	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	-109	0	-107	0	multi-exon	FALSE	canonical	3	220	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	114281481	False	NA	NA	False	AATAAA	-16	NA	114281493	114282270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114281847_114282020
WTC11_00023228	chr13	+	2468	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	-107	9	-107	0	multi-exon	FALSE	canonical	3	220	junction_1	107.021054810909	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114281481	False	NA	-1	True	AATAAA	-16	NA	114281493	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
WTC11_00023229	chr13	+	2208	8	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	180.896520199832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114281481	False	NA	-1	True	AATAAA	-16	NA	114281493	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114301730_114302026_114304788
WTC11_00023230	chr13	+	1081	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	160.252800287546	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	114281482	False	NA	2	True	AATAAA	-15	NA	114281494	114287617	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114287312
WTC11_00023231	chr13	+	873	5	NNC	ENSG00000169062.15	novel	965	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	176.317008538598	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	114277729	True	NA	2	True	AATAAA	-15	NA	114281603	114287617	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114287312
WTC11_00023233	chr13	+	1718	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	0	169	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	161.502941149689	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCGTTCACTTTCTTCA	114277726	True	NA	9	True	AATAAA	-22	NA	114281600	114287786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114286738
WTC11_00023235	chr13	+	3082	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	-847	0	-820	0	multi-exon	FALSE	canonical	3	215	junction_3	122.491772682903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	NA	False	NA	-1	True	AATAAA	-16	NA	114280780	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
WTC11_00023238	chr13	+	937	8	FSM	ENSG00000169062.15	ENST00000493727.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	170.702749161894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGATGTGGAGAGATCT	114281839	False	NA	NA	False	GATAAA	-5	NA	114281952	114301756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114282128_114282836_114282944_114286258_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730
WTC11_00023239	chr13	+	2423	2	FSM	ENSG00000169062.15	ENST00000619079.1	2423	2	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	114284957	False	NA	2	True	AATAAA	-15	NA	114285076	114287617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114286401_114286518
WTC11_00023243	chr13	+	615	3	FSM	ENSG00000198824.7	ENST00000478022.3	615	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTGTTCAGTCTTTC	114310279	True	NA	56	True	AGTAAA	-19	NA	114314530	114322441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114314644_114321109_114321233_114322062
WTC11_00023245	chr13	-	383	1	FSM	ENSG00000279081.2	ENST00000624447.2	897	1	282	232	282	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGTTGCAATATGCAG	NA	False	NA	NA	False	NA	NA	NA	18207184	18206801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_18206800_18207200
WTC11_00023246	chr13	-	203	1	FSM	ENSG00000242756.2	ENST00000436571.1	331	1	129	-1	129	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCAGTGGTGGGATCTC	NA	False	NA	NA	False	CATAAA	-29	NA	18837969	18837766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_18837800_18838000
WTC11_00023247	chr13	-	372	1	FSM	ENSG00000215349.2	ENST00000400109.2	1033	1	533	128	533	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATAAGGATCTCGGTAA	NA	False	NA	NA	False	CATAAA	-37	NA	19305092	19304720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19304700_19305100
WTC11_00023248	chr13	-	248	1	FSM	ENSG00000215572.2	ENST00000400596.2	1257	1	1132	-123	1132	123	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGCCCCTGGGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	19560137	19559889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19559900_19560100
WTC11_00023249	chr13	-	1675	8	FSM	ENSG00000121390.19	ENST00000471658.5	1647	8	-28	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	163.644088665317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTGTCATTTTGT	-19776121	True	NA	-13	True	ATTAAA	-14	NA	19782945	19674755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19674985_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
WTC11_00023250	chr13	-	1709	8	FSM	ENSG00000121390.19	ENST00000492741.5	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	168.787150105736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTGTGGTGGTCTTG	-19776118	True	NA	-3	True	ATTAAA	-17	NA	19782942	19675387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19675654_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
WTC11_00023251	chr13	-	2435	9	FSM	ENSG00000121390.19	ENST00000338910.9	2435	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	69.8720929627845	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-19776121	True	NA	NA	False	AATAAA	-22	NA	19782945	19702499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
WTC11_00023252	chr13	-	2013	10	FSM	ENSG00000121390.19	ENST00000619300.4	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	146.430449508324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTATTAGTGGTAT	-19776195	True	NA	-9	True	AATAAA	-21	NA	19783019	19702870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385_19782792_19782916
WTC11_00023253	chr13	-	2861	5	FSM	ENSG00000132950.19	ENST00000382909.5	2861	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	12.0415945787923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19851785	False	NA	NA	False	ATTAAA	-21	NA	19851796	19823481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354
WTC11_00023254	chr13	-	3200	6	FSM	ENSG00000132950.19	ENST00000535942.5	3200	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	31.1255522039369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19862167	True	NA	NA	False	ATTAAA	-21	NA	19863612	19823481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19851354_19852191_19862398_19862467_19863449
WTC11_00023255	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	25.7705733149185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19862204	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
WTC11_00023256	chr13	-	1335	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	-16	-227	0	227	multi-exon	FALSE	canonical	3	29	junction_1	30.6349473640808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACAGGGTGAAACCCAAT	-19862079	True	NA	NA	False	NA	NA	NA	19863524	19837225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
WTC11_00023258	chr13	-	1583	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	-88	-113	0	101	multi-exon	FALSE	canonical	3	50	junction_1	22.5530485744167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGGTCAAGGGCTGGAA	-19862167	True	NA	NA	False	AATAAA	-17	NA	19863612	19837351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
WTC11_00023259	chr13	-	5216	2	FSM	ENSG00000121743.4	ENST00000241125.4	5214	2	0	-2	0	2	multi-exon	FALSE	canonical	2	4	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTTCTGCAGTTGGTTA	-20160984	True	NA	NA	False	AATAAA	-21	NA	20161052	20138252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20143306_20160889
WTC11_00023260	chr13	-	2222	2	FSM	ENSG00000165474.8	ENST00000382848.5	2290	2	0	68	0	-68	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAACTAAAATAATTTTG	-20192915	True	NA	NA	False	AATAAA	-21	NA	20192938	20187537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20189604_20192782
WTC11_00023261	chr13	-	1482	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	1	0	0	multi-exon	FALSE	canonical	3	12	junction_7	5.69281681290608	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTTTCTCTTTTGGTT	-20525728	True	NA	-2	True	AATAAA	-20	NA	20525857	20403669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
WTC11_00023263	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.6833214455479	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-20773446	True	NA	NA	False	NA	NA	NA	20773961	20728730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
WTC11_00023265	chr13	-	455	1	FSM	ENSG00000275485.1	ENST00000619006.1	500	1	-22	67	-22	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGGCATGCCATGACC	-20768882	False	NA	NA	False	NA	NA	NA	20769397	20768942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20768900_20769400
WTC11_00023266	chr13	-	9644	21	NIC	ENSG00000132953.18	novel	9857	23	NA	NA	0	-27	combination_of_known_splicesites	TRUE	canonical	3	22	junction_19	46.0494299638986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTCCATTGTATTTA	-20899608	True	NA	-27	True	AATATA	-14	NA	20902747	20777355	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_20783920_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20862968_20863124_20868595_20868702_20902669
WTC11_00023267	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	FALSE	non_canonical	0	0	junction_3	35.1825522591962	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	-20902033	False	NA	0	True	AATAAA	-22	NA	20902810	20777328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
WTC11_00023268	chr13	-	914	5	FSM	ENSG00000132953.18	ENST00000490513.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	63.3576159589358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTAAGTGTGCTAT	NA	False	NA	NA	False	NA	NA	NA	20903048	20855633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20855766_20862716_20862859_20862968_20863124_20868595_20868702_20902669
WTC11_00023270	chr13	-	5546	8	FSM	ENSG00000150457.9	ENST00000382592.5	5546	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	5.30306034093445	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTAGTTGGTGTCATGT	-21057897	True	NA	-6	True	ATTAAA	-15	NA	21061586	20973035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20975365_20979690_20979798_20981465_20981649_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
WTC11_00023271	chr13	-	420	1	FSM	ENSG00000180172.7	ENST00000419579.2	400	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAGGAAG	NA	False	NA	NA	False	AATAAA	-12	NA	21094714	21094294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21094300_21094700
WTC11_00023272	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	158.035903954688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165573	True	NA	-2	True	AATAAA	-19	NA	21176548	21153594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
WTC11_00023273	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_5	81.0169735302424	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165577	True	NA	-2	True	AATAAA	-19	NA	21176552	21153594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
WTC11_00023274	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	209.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	-21165576	True	NA	NA	False	NA	NA	NA	21176551	21154696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21176374
WTC11_00023275	chr13	-	930	5	FSM	ENSG00000165480.16	ENST00000465471.5	930	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	235.712086028697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAAGAATCAAGTT	-21165576	True	NA	NA	False	AAAAAG	-3	NA	21176551	21161789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176347
WTC11_00023277	chr13	-	5299	13	NNC	ENSG00000180776.16	novel	5355	13	NA	NA	0	69750	intron_retention	FALSE	non_canonical	0	0	junction_1	53.0944520014411	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTGTGTCATTTGCAAC	-21451304	True	NA	NA	False	AATAAA	-36	NA	21459303	21302820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_21302847_21372574_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
WTC11_00023278	chr13	-	5226	11	NNC	ENSG00000180776.16	novel	5315	11	NA	NA	8	69750	intron_retention	FALSE	non_canonical	0	0	junction_1	69.5474658057359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTGTGTCATTTGCAAC	-21451362	True	NA	NA	False	AATAAA	-36	NA	21459361	21302820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_21302847_21372574_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21459053
WTC11_00023279	chr13	-	5372	13	FSM	ENSG00000180776.16	ENST00000400590.8	5355	13	0	-17	0	17	multi-exon	FALSE	canonical	3	21	junction_2	60.0501526503749	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTATTTACCAAATGA	-21451304	True	NA	12	True	AATAAA	-36	NA	21459303	21372553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21378660_21378739_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
WTC11_00023280	chr13	-	5357	12	FSM	ENSG00000180776.16	ENST00000382466.7	5338	12	0	-19	0	17	multi-exon	FALSE	canonical	3	60	junction_2	38.167746324667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTATTTACCAAATGA	-21451370	True	NA	12	True	AATAAA	-36	NA	21459369	21372553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
WTC11_00023281	chr13	-	5334	11	FSM	ENSG00000180776.16	ENST00000542645.5	5315	11	0	-19	0	17	multi-exon	FALSE	canonical	3	12	junction_10	54.6725708193789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTATTTACCAAATGA	-21451371	True	NA	12	True	AATAAA	-36	NA	21459370	21372553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21459053
WTC11_00023283	chr13	-	1888	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	-3	0	3	multi-exon	TRUE	canonical	3	304	junction_5	22.3092464986795	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTTTTTATTTTAC	-21596643	True	NA	NA	False	AATAAA	-26	NA	21604170	21492687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
WTC11_00023284	chr13	-	579	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	2	22	2	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACAAAAATGACTACAT	NA	False	NA	NA	False	NA	NA	NA	21629013	21628434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21628400_21629000
WTC11_00023286	chr13	-	552	1	FSM	ENSG00000232187.1	ENST00000450676.1	552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGGCTAATTTCCCCA	NA	False	NA	NA	False	AATGAA	-7	NA	22696574	22696022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_22696000_22696600
WTC11_00023287	chr13	-	15164	9	NIC	ENSG00000151835.17	novel	7009	10	NA	NA	0	1	intron_retention	FALSE	canonical	2	18	junction_1	9.89238975172329	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTAATGGGTGTTTCCT	-23371733	True	NA	-6	True	AATAAA	-21	NA	23375488	23328828	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
WTC11_00023290	chr13	-	2383	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	-2	0	2	multi-exon	FALSE	canonical	3	175	junction_12	34.9320769494171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTTCACCTGTTTGG	-23886150	True	NA	-10	True	AATAAA	-19	NA	23889400	23730186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
WTC11_00023291	chr13	-	984	3	FSM	ENSG00000027001.10	ENST00000469167.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGCTGTTCCCCTCCC	-23886148	True	NA	NA	False	NA	NA	NA	23889398	23881698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23881788_23886332_23886507_23888677
WTC11_00023292	chr13	-	5439	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	-2	0	2	multi-exon	FALSE	canonical	3	161	junction_29	24.782061998104	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTCTGTGTCTCATT	-24507366	True	NA	-2	True	AATAAA	-18	NA	24512778	24420928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
WTC11_00023293	chr13	-	5005	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	77	0	-72	multi-exon	FALSE	canonical	3	130	junction_9	27.9617484253042	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCAGGTTTTGTTAATG	-24917537	True	NA	NA	False	NA	NA	NA	24922861	24882355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
WTC11_00023295	chr13	-	770	5	ISM	ENSG00000253771.7	ENST00000429698.2	1150	7	6	15928	-3	1200	5prime_fragment	FALSE	canonical	1	1	junction_1	6.21992765231236	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCACAAGGTGTTAGC	-24968195	True	NA	NA	False	NA	NA	NA	24968487	24940601	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_24940786_24941986_24942109_24942931_24943022_24951396_24951489_24968205
WTC11_00023296	chr13	-	349	1	FSM	ENSG00000232858.1	ENST00000428810.1	349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAACGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	24988925	24988576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24988600_24988900
WTC11_00023297	chr13	-	8059	4	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_3	5.24933858267454	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCGAGCCGGGAAGAAT	-25047466	False	NA	NA	False	NA	NA	NA	25047476	25034294	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_25040474_25043542_25043761_25045685_25046977_25047105
WTC11_00023298	chr13	-	10371	1	FSM	ENSG00000165566.13	ENST00000515384.2	10610	1	239	0	239	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGGTTGTTATTTCT	NA	False	NA	NA	False	AATAAA	-30	NA	25172049	25161678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_25161700_25172000
WTC11_00023299	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	10.9997310349043	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-25285554	True	NA	1	True	AATAAA	-20	NA	25287488	25246221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
WTC11_00023301	chr13	-	3845	2	FSM	ENSG00000180730.5	ENST00000319420.4	3845	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGCGGAGTTGGGTTT	-26049638	True	NA	-17	True	AATAAA	-17	NA	26052016	26044596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26047067_26050641
WTC11_00023302	chr13	-	3289	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	-7	0	7	multi-exon	FALSE	canonical	3	41	junction_4	27.4362898366379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTGTTCCACTGTGG	-26220200	False	NA	-1	True	AATAAA	-33	NA	26221842	26212754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
WTC11_00023304	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	23.636571240347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220672	True	NA	-21	True	AATAAA	-13	NA	26222314	26212774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
WTC11_00023305	chr13	-	4476	9	FSM	ENSG00000152484.14	ENST00000282344.11	4412	9	0	-64	0	64	multi-exon	FALSE	canonical	3	181	junction_6	29.9643016771624	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAAACTGTGTTACT	-27167486	True	NA	52	True	NA	NA	NA	27171811	27066091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27069385_27071070_27071150_27075190_27075389_27089882_27089967_27090081_27090159_27095600_27095831_27105730_27105945_27116515_27116597_27171591
WTC11_00023306	chr13	-	603	3	FSM	ENSG00000152484.14	ENST00000612674.1	712	3	0	109	0	-109	multi-exon	FALSE	canonical	3	240	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCCACACCCCCAGTT	NA	False	NA	NA	False	NA	NA	NA	27095706	27089546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27089967_27090081_27090159_27095600
WTC11_00023307	chr13	-	896	3	FSM	ENSG00000122033.15	ENST00000405591.3	889	3	0	-7	0	0	multi-exon	FALSE	canonical	3	580	junction_2	25.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27440388	False	NA	-6	True	AATAAA	-23	NA	27440475	27435642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988
WTC11_00023308	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_4	47.91137651957	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
WTC11_00023309	chr13	-	1104	7	FSM	ENSG00000122033.15	ENST00000381116.5	1104	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	273.628346890855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27449851_27449919_27450508
WTC11_00023310	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	249.78090399388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	-27450121	False	NA	-47	True	NA	NA	NA	27450131	27435683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
WTC11_00023311	chr13	-	785	5	FSM	ENSG00000122033.15	ENST00000460973.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	234.685427753834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAGAAGGTACAAG	-27450186	False	NA	NA	False	CATAAA	-38	NA	27450196	27437115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27450141
WTC11_00023318	chr13	-	4828	10	FSM	ENSG00000139517.9	ENST00000316334.5	4750	10	-76	-2	-76	2	multi-exon	FALSE	canonical	3	66	junction_7	6.70175948888899	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACGTTGTCTCTTTTCTT	-27618494	True	NA	-3	True	AATAAA	-20	NA	27620605	27545910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569028_27569277_27581296_27581804_27620374
WTC11_00023319	chr13	-	7125	30	FSM	ENSG00000102755.12	ENST00000282397.9	7123	30	0	-2	0	2	multi-exon	TRUE	canonical	3	53	junction_12	76.5910430245042	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTCCCTGATTTGCT	-28492009	True	NA	1	True	AATAAA	-17	NA	28495128	28300343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28303369_28306677_28306773_28308842_28308928_28311589_28311733_28311992_28312099_28317497_28317598_28319422_28319535_28321462_28321586_28322261_28322360_28322789_28322947_28327461_28327551_28329614_28329729_28334024_28334130_28339167_28339301_28345444_28345552_28357553_28357686_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
WTC11_00023320	chr13	-	3509	15	FSM	ENSG00000102755.12	ENST00000541932.5	2969	15	-536	-4	-519	4	multi-exon	FALSE	canonical	3	54	junction_1	52.8169731531562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTACTCTGAGCCTGAT	-28495638	False	NA	-6	True	ATTAAA	-20	NA	28495664	28368091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28368664_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
WTC11_00023321	chr13	-	6453	13	FSM	ENSG00000102755.12	ENST00000615840.4	6453	13	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	21.1259450807663	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTGTTTGGTCTGCTG	-28491960	True	NA	84	True	AATAAA	-20	NA	28495079	28385547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
WTC11_00023323	chr13	-	7352	13	FSM	ENSG00000139514.13	ENST00000380752.10	7343	13	0	-9	0	9	multi-exon	FALSE	canonical	3	179	junction_12	19.8471590466299	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCTCAAGAATCCTAG	-29591123	True	NA	-9	True	AATAAA	-24	NA	29595688	29509404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415
WTC11_00023324	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	11.8953772533703	733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	-29849452	True	NA	-2	True	TTTAAA	-18	NA	29850617	29764370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
WTC11_00023325	chr13	-	7617	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	3	-2	3	2	multi-exon	FALSE	canonical	2	8	junction_6	5.22398315464359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTTGTGGTTCATTT	-30307253	True	NA	-2	True	AATAAA	-24	NA	30307548	30202627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
WTC11_00023326	chr13	-	363	2	FSM	ENSG00000102781.14	ENST00000480854.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAATGAGACGGCGTATC	NA	False	NA	NA	False	NA	NA	NA	30210664	30208724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30208739_30210315
WTC11_00023327	chr13	-	5532	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	-76	0	76	multi-exon	FALSE	canonical	3	2423	junction_1	3990.78609894091	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTCCAGAGCTACCT	-30387004	True	NA	56	True	ATTAAA	-15	NA	30465936	30456627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
WTC11_00023328	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	5491.0238742424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-30385378	False	NA	-31	True	AATAAA	-24	NA	30464310	30459849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
WTC11_00023329	chr13	-	4352	5	FSM	ENSG00000189403.15	ENST00000399489.5	1727	5	-525	-2100	-462	-48	multi-exon	FALSE	canonical	3	36	junction_2	5816.51858932816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCCTGTGTACC	-30385840	False	78932	16	True	AATGAA	-1	NA	30464772	30458794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30461638_30461689_30462537_30462713_30463206_30463353_30463530
WTC11_00023331	chr13	-	5480	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	-135	-101	0	101	multi-exon	TRUE	canonical	3	768	junction_12	92.9664894792202	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAGTGCAATTAATTT	-31161857	False	NA	NA	False	AGTAAA	-31	NA	31162039	31134871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
WTC11_00023333	chr13	-	5683	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	-447	-1756	14	101	multi-exon	FALSE	canonical	3	44	junction_6	233.381854144126	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAGTGCAATTAATTT	NA	False	NA	NA	False	AGTAAA	-31	NA	31162374	31134871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
WTC11_00023337	chr13	-	1148	2	FSM	ENSG00000139597.18	ENST00000464470.1	1145	2	0	-3	0	3	multi-exon	FALSE	canonical	3	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGTCTCCCAAATCA	-32427972	False	NA	2	True	AATAAA	-21	NA	32428014	32424918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32425956_32427903
WTC11_00023338	chr13	-	2868	8	FSM	ENSG00000244754.9	ENST00000674422.1	2873	8	6	-1	0	0	multi-exon	FALSE	canonical	1	4	junction_1	113.855798522266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCAATTTGGTACCAA	-32532846	True	NA	NA	False	AAGAAA	-15	NA	32538819	32443064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32444127_32517856_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
WTC11_00023339	chr13	-	2329	7	FSM	ENSG00000244754.9	ENST00000505213.5	2343	7	14	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	97.1489406358436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTGTGTAACAAC	-32532846	True	NA	NA	False	AATGAA	-31	NA	32538819	32443696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32444127_32517856_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
WTC11_00023340	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	16.8237926758505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	-32532809	True	NA	-6	True	AATAAA	-16	NA	32538782	32510291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
WTC11_00023341	chr13	-	5643	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	6	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	91.6333272705224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-32532846	True	NA	NA	False	NA	NA	NA	32538819	32514019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
WTC11_00023342	chr13	-	3655	3	FSM	ENSG00000244754.9	ENST00000674293.1	3632	3	0	-23	0	0	multi-exon	FALSE	canonical	3	260	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGGTCTTGTCATT	NA	False	NA	0	True	ATTAAA	-17	NA	32524649	32516893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181
WTC11_00023343	chr13	-	5786	2	FSM	ENSG00000244754.9	ENST00000503814.2	5786	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGGTCTTGTCATT	-32526035	False	NA	0	True	ATTAAA	-17	NA	32526048	32516893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372
WTC11_00023350	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_5	77.6468930479514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-32532829	True	NA	-11	True	AATAAA	-17	NA	32538802	32517620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
WTC11_00023359	chr13	-	5915	14	FSM	ENSG00000133121.21	ENST00000336934.10	5915	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	2.29225606550021	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGATTTTCATGCT	-33285546	True	NA	NA	False	AATAAA	-37	NA	33285755	33103136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_33105711_33106757_33106935_33109872_33110091_33110685_33110908_33111777_33111893_33112720_33112932_33118064_33118264_33126080_33126241_33127372_33127547_33128928_33130290_33142309_33142374_33165336_33165419_33167550_33167623_33285469
WTC11_00023360	chr13	-	8062	17	FSM	ENSG00000133083.15	ENST00000360631.8	8394	17	0	332	0	-332	multi-exon	FALSE	canonical	3	22	junction_12	11.7200415954893	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACTACATAATACCTT	-36130717	True	NA	-20	True	AATAAA	-20	NA	36131382	35768983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
WTC11_00023361	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.506611674983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	-35854704	True	NA	-4	True	AATAAA	-14	NA	35855642	35771338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
WTC11_00023362	chr13	-	5224	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	23	0	23	0	multi-exon	FALSE	canonical	3	12	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	-35854823	True	NA	0	True	AATAAA	-15	NA	35855761	35845899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35850777_35854498_35854594_35855509
WTC11_00023363	chr13	-	2101	7	FSM	ENSG00000133083.15	ENST00000379892.4	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6.84957419601151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATACATAATTTTTTAA	-36130641	True	NA	NA	False	NA	NA	NA	36131306	35849922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35850777_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
WTC11_00023364	chr13	-	2051	16	FSM	ENSG00000250709.1	ENST00000511166.1	2051	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	72.339016673807	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCTACAAGAACAAATGG	-36293914	True	NA	NA	False	NA	NA	NA	36297842	36168793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36227347_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
WTC11_00023369	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	63.5259869691779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	-36293886	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
WTC11_00023372	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	66.3720573735665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293904	True	NA	-2	True	AATAAA	-17	NA	36297832	36280056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
WTC11_00023373	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	307.883805192803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-36335708	False	10686	1	True	TATAAA	-21	NA	36346394	36301637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
WTC11_00023374	chr13	-	5010	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	20	-86	0	84	multi-exon	FALSE	canonical	3	785	junction_8	78.4624711247358	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGTGTTGTCACTGCTG	-36336091	True	NA	85	True	NA	NA	NA	36346777	36301553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
WTC11_00023375	chr13	-	4973	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-36336066	True	NA	1	True	TATAAA	-21	NA	36346752	36301637	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
WTC11_00023377	chr13	-	2001	5	FSM	ENSG00000133104.14	ENST00000495510.1	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	402.829601072215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTAGTTTATGATAT	-36335597	False	86	NA	False	AATAAA	-15	NA	36346283	36325922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
WTC11_00023378	chr13	-	1231	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	-16	-151	-6	41	multi-exon	FALSE	canonical	3	17	junction_7	139.983871838866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAACATAATTTTTGTA	-36995746	True	NA	50	True	AAAAAG	-45	NA	36999358	36949696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
WTC11_00023379	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	152.634417174248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995688	True	NA	9	True	TATAAA	-33	NA	36999300	36949737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
WTC11_00023380	chr13	-	1296	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	-36	-41	-24	41	multi-exon	FALSE	canonical	3	387	junction_7	29.1653438853482	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAACATAATTTTTGTA	-36995764	True	NA	50	True	AAAAAG	-45	NA	36999376	36949696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
WTC11_00023381	chr13	-	926	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	-7	0	0	multi-exon	FALSE	canonical	2	5	junction_2	142.287506039708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	-36995688	True	NA	-12	True	AATAAA	-15	NA	36999300	36949838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
WTC11_00023390	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	108.254987875848	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37053954	True	NA	0	True	AATACA	-25	NA	37059688	37009311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
WTC11_00023391	chr13	-	2842	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	5	-4	5	0	multi-exon	FALSE	canonical	3	105	junction_20	92.4143372113993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37053974	True	NA	0	True	AATACA	-25	NA	37059708	37009311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
WTC11_00023393	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	94.7504031067356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	-37053915	True	NA	-43	True	AATAAA	-24	NA	37059649	37009492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
WTC11_00023403	chr13	-	3197	22	FSM	ENSG00000133110.15	ENST00000379743.8	3196	22	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_9	1.41100308476467	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGTGTTTCTTGAG	-37598655	True	NA	NA	False	ATTAAA	-11	NA	37598750	37562589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37563371_37564518_37564561_37569299_37569384_37569743_37569822_37570579_37570670_37571368_37571459_37577752_37577799_37578843_37578912_37579018_37579122_37579228_37579360_37579860_37579992_37580560_37580698_37582365_37582515_37583968_37584104_37584715_37584929_37586138_37586281_37586781_37586929_37587821_37587987_37590371_37590530_37592099_37592165_37597183_37597283_37598607
WTC11_00023404	chr13	-	8239	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	0	-260	0	260	multi-exon	FALSE	canonical	3	13	junction_2	7.79743547584717	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTTTACCTAGTGAAA	-37869293	True	NA	NA	False	AATAAA	-11	NA	37869772	37631802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
WTC11_00023406	chr13	-	5182	13	FSM	ENSG00000120685.20	ENST00000352251.8	5182	13	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	37.2028971392761	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-39032526	True	NA	-23	True	CATAAA	-17	NA	39038089	39009864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
WTC11_00023407	chr13	-	5115	12	FSM	ENSG00000120685.20	ENST00000625998.2	5102	12	0	-13	0	12	multi-exon	FALSE	canonical	3	35	junction_11	126.091925013932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTTGACCATTCAT	-39032513	True	NA	-11	True	CATAAA	-29	NA	39038076	39009852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39037197
WTC11_00023412	chr13	-	2133	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	0	-1	0	1	multi-exon	TRUE	canonical	1	6	junction_2	11.0252236056942	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATGAGTCATGGAGTGT	-39602938	True	NA	-1	True	AATAAA	-20	NA	39603193	39342890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
WTC11_00023413	chr13	-	5779	3	FSM	ENSG00000150907.10	ENST00000379561.6	5779	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	19	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTGTCATTGGTTCAA	-40661067	True	NA	-6	True	ATTAAA	-26	NA	40666641	40555666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_40559035_40559508_40560861_40665582
WTC11_00023414	chr13	-	1318	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	168	0	0	multi-exon	FALSE	canonical	3	534	junction_3	24.592794789441	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATGTTGATTATTAC	-40765179	True	NA	-1	True	AATAAA	-22	NA	40771190	40729295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
WTC11_00023415	chr13	-	436	3	FSM	ENSG00000102738.8	ENST00000435009.2	588	3	152	0	152	0	multi-exon	FALSE	canonical	1	1	junction_2	269.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCATGAGGAAGAGTCAA	-40764780	False	NA	NA	False	NA	NA	NA	40770791	40759001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_40759107_40766745_40767034_40770748
WTC11_00023416	chr13	-	4035	9	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	39	-14	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	6.09815545882523	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATTCTCAGTGTCT	-41061228	True	NA	NA	False	AATAAA	-4	NA	41061401	40932041	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
WTC11_00023417	chr13	-	5260	2	Genic_Genomic	ENSG00000165572.8	novel	5234	1	NA	NA	0	51299	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAGAGTAAAAT	-41131690	True	NA	NA	False	NA	NA	NA	41132802	41076269	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_41076296_41127568
WTC11_00023418	chr13	-	5262	2	Genic_Genomic	ENSG00000165572.8	novel	5234	1	NA	NA	-1	51299	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAGAGTAAAAT	-41131691	True	NA	NA	False	NA	NA	NA	41132803	41076269	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_41076297_41127568
WTC11_00023420	chr13	-	454	2	Antisense	novelGene_ENSG00000278390.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	272	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCGTGTAGAAGGGGTC	NA	False	NA	NA	False	NA	NA	NA	41160428	41159943	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_41160186_41160216
WTC11_00023421	chr13	-	5115	1	FSM	ENSG00000120696.9	ENST00000379483.4	4736	1	-382	3	-382	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTTTCCTGACTTTCTA	NA	False	NA	-19	True	AATAAA	-15	NA	41194951	41189836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41189800_41195000
WTC11_00023422	chr13	-	2181	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	3	0	-3	multi-exon	FALSE	canonical	3	21	junction_9	25.5623179458638	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTTTGTTTGACTTCT	-41262100	True	NA	-20	True	TATAAA	-22	NA	41263576	41216371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
WTC11_00023428	chr13	-	413	1	FSM	ENSG00000214222.2	ENST00000454403.1	411	1	32	-34	32	34	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGGAGGCCGAAGACG	NA	False	NA	NA	False	NA	NA	NA	41385151	41384738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41384700_41385200
WTC11_00023429	chr13	-	7184	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	-10	0	10	multi-exon	TRUE	canonical	0	0	junction_41	11.8121269454407	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGAGTTTGCATGGCT	-41959013	True	NA	0	True	AATAAA	-36	NA	41961109	41566824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
WTC11_00023430	chr13	-	3475	26	FSM	ENSG00000102763.18	ENST00000281496.6	3475	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	11.8222840432803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCAGTCCTTTTGTTG	-41959024	True	NA	-5	True	AATAAA	-26	NA	41961120	41719336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
WTC11_00023431	chr13	-	2215	1	FSM	ENSG00000237263.1	ENST00000403865.2	2162	1	-54	1	-54	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTCAGCAGACATTTA	NA	False	NA	NA	False	NA	NA	NA	42071147	42068932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_42068900_42071100
WTC11_00023432	chr13	-	3541	6	NNC	ENSG00000229546.1	novel	227	2	NA	NA	-29821	1257	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	46.8802730367476	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCTTAATCTCCAGTC	-42872697	False	NA	1	True	ATTAAA	-24	NA	42872708	42841156	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_42842100_42842413_42842549_42842798_42842892_42862087_42862166_42865676_42867818_42872557
WTC11_00023433	chr13	-	3338	2	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	594	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAATTGAGTTCT	-42863184	False	NA	-1	True	AATAAA	-36	NA	42864426	42849693	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087
WTC11_00023434	chr13	-	6074	4	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	218.44043174793	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAATTGAGTTCT	-42871570	True	NA	-1	True	AATAAA	-36	NA	42872812	42849693	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676_42868462_42870600
WTC11_00023435	chr13	-	1470	4	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_2	224.054060936691	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTACTTGTGTAATTGAG	-42871553	True	NA	-5	True	AATAAA	-32	NA	42872795	42849697	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42870600_42870760_42872557
WTC11_00023436	chr13	-	839	3	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	236	junction_1	89	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-42871570	True	NA	-26	True	AATAAA	-22	NA	42872812	42868039	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42868465_42870600_42870760_42872557
WTC11_00023437	chr13	-	2957	2	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	414	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-42871558	True	NA	-32	True	AATAAA	-16	NA	42872800	42868045	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42870760_42872557
WTC11_00023438	chr13	-	3300	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCAGCGGCTGCTGCT	-42871570	True	NA	NA	False	NA	NA	NA	42872812	42869512	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42869500_42872800
WTC11_00023439	chr13	-	901	3	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-34	-1249	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	11	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTTGTTGTAGAAAATG	-43879137	True	NA	-3	True	AATAAA	-19	NA	43879774	43859399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_43860071_43874841_43874928_43879630
WTC11_00023440	chr13	-	1150	3	FSM	ENSG00000237361.4	ENST00000660135.2	2363	3	262	951	261	-951	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCATTCTAACCTGCCTA	-44405670	True	NA	NA	False	NA	NA	NA	44405692	44402478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44403330_44404391_44404612_44405613
WTC11_00023441	chr13	-	3133	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	2	0	-2	multi-exon	FALSE	canonical	3	400	junction_2	163	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCCTCATTTTAGT	-44431647	True	NA	-1	True	ATTAAA	-14	NA	44436845	44432144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44436503
WTC11_00023442	chr13	-	2870	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_2	350	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCCTCATTTTAGT	NA	False	NA	-1	True	ATTAAA	-14	NA	44437254	44432144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44437175
WTC11_00023443	chr13	-	5959	3	FSM	ENSG00000102804.15	ENST00000458659.3	5961	3	0	2	0	-2	multi-exon	FALSE	canonical	3	180	junction_2	273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCCTCATTTTAGT	-44576302	False	104	-1	True	ATTAAA	-14	NA	44576330	44432144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44573162
WTC11_00023444	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	21.5687244996826	4613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-44986360	True	NA	-4	True	ATTAAA	-15	NA	44989471	44939248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
WTC11_00023445	chr13	-	4550	6	FSM	ENSG00000133112.17	ENST00000530705.6	4548	6	0	-2	0	2	multi-exon	FALSE	canonical	3	3129	junction_5	544.574843341115	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCCTTAAGGTTATAT	-45181082	True	NA	17	True	AATAAA	-32	NA	45341183	45333468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
WTC11_00023446	chr13	-	4814	6	FSM	ENSG00000133112.17	ENST00000616577.4	4814	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1422.4669275593	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATCCTTAAGGTTAT	-45341255	False	NA	15	True	AATAAA	-30	NA	45341284	45333470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337554_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
WTC11_00023447	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	1720.98945014198	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	-45181111	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
WTC11_00023450	chr13	-	1851	3	FSM	ENSG00000133112.17	ENST00000490277.1	1851	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	2175.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAGAATGCCTTTTAG	-45181054	True	NA	-23	True	AATAAA	-16	NA	45341155	45337176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45338659_45340185_45341041
WTC11_00023451	chr13	-	1008	5	FSM	ENSG00000133112.17	ENST00000309246.9	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	3129	junction_4	399.309638626467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACTGCACTCTATCCT	-45341057	False	NA	NA	False	NA	NA	NA	45341086	45338184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
WTC11_00023452	chr13	-	915	1	FSM	ENSG00000214455.4	ENST00000398357.2	915	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGACACTCACCAGAATA	NA	False	NA	NA	False	NA	NA	NA	45391267	45390352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45390400_45391300
WTC11_00023453	chr13	-	3724	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	-66	5	16	-5	multi-exon	FALSE	canonical	3	17	junction_3	6.33820475420074	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATTTCTGGTTATT	-45417683	True	NA	NA	False	AATAAA	-21	NA	45418439	45393320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
WTC11_00023454	chr13	-	8105	21	NNC	ENSG00000123200.17	novel	8024	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	87.4817695294282	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046180	True	NA	-8	True	AATAAA	-18	NA	46052685	45954464	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45976181_45976266_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052403
WTC11_00023455	chr13	-	8027	19	FSM	ENSG00000123200.17	ENST00000679008.1	8024	19	0	-3	0	3	multi-exon	FALSE	canonical	3	93	junction_18	49.0032752747642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCTTTCCATTTCAG	-46046241	True	NA	-5	True	AATAAA	-21	NA	46052746	45954461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
WTC11_00023456	chr13	-	8018	19	FSM	ENSG00000123200.17	ENST00000242848.8	8018	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_18	58.6605636556201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046241	True	NA	-8	True	AATAAA	-18	NA	46052746	45954464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052403
WTC11_00023459	chr13	-	6410	17	FSM	ENSG00000123200.17	ENST00000282007.7	6412	17	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_16	53.9396364003318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAAGGTCTAATTATCT	-46046254	True	NA	NA	False	AATAAA	-23	NA	46052759	45962177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
WTC11_00023461	chr13	-	535	3	FSM	ENSG00000123200.17	ENST00000464597.2	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCTTCAGAGCTTTTT	-46020468	True	NA	NA	False	AATAAA	-23	NA	46020487	46010149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46010506_46011414_46011555_46020448
WTC11_00023463	chr13	-	3643	16	FSM	ENSG00000136167.15	ENST00000323076.7	3643	16	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_13	4.2026446699932	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGTCTCTGGATGTTT	-46182044	True	NA	-9	True	AATAAA	-13	NA	46182177	46125922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46127724_46130813_46130939_46134126_46134251_46142291_46142426_46143289_46143405_46144441_46144521_46146907_46147104_46148351_46148448_46150935_46151079_46152779_46152946_46154804_46154887_46156437_46156571_46158521_46158652_46158825_46158990_46159598_46159687_46182110
WTC11_00023464	chr13	-	1080	5	FSM	ENSG00000102445.20	ENST00000487195.5	1736	5	656	0	656	0	multi-exon	FALSE	canonical	2	6	junction_2	4.43705983732471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	NA	False	NA	2	True	NA	NA	NA	46350351	46342963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112
WTC11_00023465	chr13	-	2091	13	ISM	ENSG00000102445.20	ENST00000676307.1	4068	14	3138	964	441	0	3prime_fragment	FALSE	canonical	1	3	junction_8	4.36765256045955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	NA	False	NA	2	True	NA	NA	NA	46372156	46342963	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940
WTC11_00023466	chr13	-	1140	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_1	185.410056061932	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAAGTGTTCACATAG	-46792929	True	NA	1	True	AATAAA	-33	NA	46797161	46771236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
WTC11_00023467	chr13	-	701	8	FSM	ENSG00000139684.15	ENST00000495654.1	701	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	258.120127072648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCAAAGTAAATGGAAGG	-46789206	False	NA	NA	False	AAAAAG	-23	NA	46793438	46779953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46785648_46785720_46787020_46787110_46791345_46791421_46793396
WTC11_00023468	chr13	-	2627	1	FSM	ENSG00000260388.2	ENST00000566385.2	2470	1	-161	4	-161	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATTTTGCTTGTTGGGTG	NA	False	NA	NA	False	AATAAA	-13	NA	47932783	47930156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47930200_47932800
WTC11_00023469	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	63.9061812346818	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	-47991422	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
WTC11_00023470	chr13	-	2316	13	FSM	ENSG00000136143.16	ENST00000647361.1	2316	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	341.694429766324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATATATACCAAGGACT	-47991427	True	NA	-33	True	AAGAAA	-25	NA	48001278	47942728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47991502_47991679_47994799_47994897_47996842_47997024_48001179
WTC11_00023475	chr13	-	961	6	FSM	ENSG00000136143.16	ENST00000646602.1	1118	6	0	157	0	71	multi-exon	FALSE	canonical	2	2	junction_1	309.263382895551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTCTCTATTGTCCT	-47991442	True	NA	-2	True	AATAAA	-19	NA	48001293	47971609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47971884_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
WTC11_00023476	chr13	-	1442	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	3	0	-3	multi-exon	FALSE	canonical	3	694	junction_2	53.1057644914582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTTTTGCAACTTTT	-47991422	True	NA	NA	False	ATTAAA	-19	NA	48001273	47987636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
WTC11_00023480	chr13	-	434	1	FSM	ENSG00000276968.1	ENST00000616786.1	434	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTCGTATGTAAATCC	NA	False	NA	NA	False	AATAAA	-18	NA	48042184	48041750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48041800_48042200
WTC11_00023481	chr13	-	460	3	FSM	ENSG00000136146.15	ENST00000495013.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	427.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCTGTTTTGTTAG	NA	False	NA	-5	True	AATAAA	-16	NA	48079975	48053322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48053492_48077152_48077312_48079843
WTC11_00023482	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_6	54.9173621604923	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	-48082294	True	NA	NA	False	NA	NA	NA	48095104	48075723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
WTC11_00023484	chr13	-	231	1	FSM	ENSG00000177197.7	ENST00000452246.1	481	1	136	114	136	-114	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATCAGCTGGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	48328428	48328197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48328200_48328400
WTC11_00023485	chr13	-	1976	1	FSM	ENSG00000139679.16	ENST00000620633.5	1976	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTGTCTAAAAGTGACT	-48412870	True	NA	1	True	ATTAAA	-19	NA	48413113	48411137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48411100_48413100
WTC11_00023486	chr13	-	2996	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	-12	0	5	multi-exon	FALSE	canonical	3	32	junction_11	9.34021784657551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGGGTTTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-29	NA	48533256	48488957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
WTC11_00023487	chr13	-	3180	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	-100	-5	0	5	multi-exon	FALSE	canonical	3	19	junction_13	15.3750725898403	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGGGTTTTTTTTAAT	-48532185	True	NA	NA	False	AATAAA	-29	NA	48533180	48488957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
WTC11_00023488	chr13	-	3191	14	FSM	ENSG00000136161.13	ENST00000430805.6	3179	14	0	-12	0	5	multi-exon	FALSE	canonical	1	2	junction_11	18.8679622641132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGGGTTTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-29	NA	48533256	48488957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48522307_48522404_48524658_48524758_48533027
WTC11_00023489	chr13	-	390	1	FSM	ENSG00000274929.1	ENST00000612996.1	587	1	187	10	187	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACAAACAGTGCTCTG	-48531417	False	NA	NA	False	AATAAA	-9	NA	48532412	48532022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48532000_48532400
WTC11_00023490	chr13	-	3511	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	-9	0	9	multi-exon	TRUE	canonical	2	22	junction_2	2.65518360947035	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCATTCCATTGCATG	-49443384	True	NA	-12	True	AATAAA	-22	NA	49444064	49308640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
WTC11_00023491	chr13	-	1627	12	FSM	ENSG00000102547.19	ENST00000410043.5	1627	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	9.39843489696006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACCTAGAATAATATATT	-49443373	True	NA	-35	True	TATAAA	-19	NA	49444053	49310651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49401132_49401271_49433317_49433394_49434085_49434224_49443985
WTC11_00023492	chr13	-	3819	11	FSM	ENSG00000136144.12	ENST00000258646.3	3816	11	0	-3	0	3	multi-exon	FALSE	canonical	3	155	junction_4	10.7163426596951	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTTGTTTTTTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	49567323	49531942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153
WTC11_00023493	chr13	-	4011	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	-3	0	3	multi-exon	FALSE	canonical	3	155	junction_4	9.9173669220548	6525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTTGTTTTTTTCCTT	-49583382	True	NA	NA	False	AATAAA	-24	NA	49585558	49531942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
WTC11_00023494	chr13	-	244	2	FSM	ENSG00000136144.12	ENST00000490058.1	373	2	0	129	0	-129	multi-exon	FALSE	canonical	3	161	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTGCGATGTGGCC	-49552241	False	NA	NA	False	AAGAAA	-28	NA	49552252	49551299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49551469_49552177
WTC11_00023495	chr13	-	979	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	-2	0	2	multi-exon	TRUE	canonical	3	943	junction_3	48.5615302705982	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTGTTATATTAATTT	-49672617	True	NA	0	True	AGTAAA	-19	NA	49691486	49660671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
WTC11_00023496	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	466.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672569	True	NA	-10	True	AATAAA	-19	NA	49691438	49660722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49663056_49663196_49691253
WTC11_00023497	chr13	-	766	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	438	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672594	True	NA	-10	True	AATAAA	-19	NA	49691463	49660722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49669776_49669847_49691253
WTC11_00023498	chr13	-	709	2	FSM	ENSG00000123179.14	ENST00000378270.5	579	2	21	-151	2	-9	multi-exon	FALSE	canonical	3	202	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAATACTGCAGTGT	-49672567	True	NA	-11	True	AGTAAA	-8	NA	49691436	49660682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49691253
WTC11_00023500	chr13	-	4595	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	-373	0	-373	0	multi-exon	TRUE	canonical	3	210	junction_1	23.9686481418957	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	-49792865	True	NA	-48	True	AATAAA	-27	NA	49793055	49699319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
WTC11_00023501	chr13	-	3059	5	FSM	ENSG00000123178.15	ENST00000361840.8	3057	5	0	-2	0	2	multi-exon	FALSE	canonical	3	111	junction_3	16.6358047596141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATCTACCTCTTTTTA	-49934840	True	NA	-5	True	ATTAAA	-26	NA	49936340	49912699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49931017_49931135_49936129
WTC11_00023502	chr13	-	3084	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	0	2	0	-2	multi-exon	FALSE	canonical	3	18	junction_3	62.2735899077611	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTATGATGTTATCTACC	NA	False	NA	-13	True	ATTAAA	-18	NA	49936490	49912707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
WTC11_00023503	chr13	-	4458	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	18	-2742	15	2672	multi-exon	FALSE	canonical	1	5	junction_4	17.895250766614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGAACAGCGTGCTTTA	-50081036	True	NA	NA	False	AAGAAA	-34	NA	50081973	50040762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
WTC11_00023504	chr13	-	1792	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	50	-36	0	36	multi-exon	FALSE	canonical	3	34	junction_1	5.59016994374947	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATGAATGGA	-50081066	True	NA	NA	False	AATATA	-45	NA	50082003	50043398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
WTC11_00023505	chr13	-	1188	4	FSM	ENSG00000231607.14	ENST00000433070.7	1208	4	20	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	18.263503375737	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCCAGAGTTTGCCTGT	-50081066	True	NA	-9	True	ATTAAA	-33	NA	50082003	50043907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50081822
WTC11_00023506	chr13	-	569	6	FSM	ENSG00000231607.14	ENST00000659339.1	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.5591410854362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATTTCTCATTGAATA	-50081054	True	NA	NA	False	AAAAAG	-12	NA	50081991	50044723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50071515_50071630_50075558_50075654_50081822
WTC11_00023507	chr13	-	239	1	FSM	ENSG00000223676.1	ENST00000445636.1	354	1	147	-32	147	32	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAAAAAAATTGTGTGG	NA	False	NA	NA	False	AATAGA	-32	NA	50361616	50361377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50361400_50361600
WTC11_00023508	chr13	-	2092	2	FSM	ENSG00000186047.11	ENST00000400393.3	2092	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAATC	-50843921	False	NA	NA	False	NA	NA	NA	50843939	50711900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50713241_50843187
WTC11_00023509	chr13	-	1121	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGAATGAGATATT	-50843449	True	NA	NA	False	ATTAAA	-22	NA	50843692	50822904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50823521_50843187
WTC11_00023510	chr13	-	3192	4	FSM	ENSG00000226792.8	ENST00000563710.7	3075	4	-113	-4	-113	4	multi-exon	FALSE	canonical	2	6	junction_3	19.4821855949366	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGACAGATTCTTTTCTT	NA	False	NA	0	True	AATAAA	-24	NA	51111387	51082114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51110795
WTC11_00023512	chr13	-	13511	2	Antisense	novelGene_ENSG00000274652.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	122	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCCTGACAGACTCC	NA	False	NA	NA	False	NA	NA	NA	51188080	51169879	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_51169982_51174671
WTC11_00023513	chr13	-	511	4	FSM	ENSG00000102786.15	ENST00000476666.5	690	4	0	179	0	-179	multi-exon	FALSE	canonical	2	2	junction_1	102.346904637556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTGTGTGCAGAG	-51369112	False	NA	NA	False	NA	NA	NA	51369131	51354255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51354337_51365702_51365846_51367804_51367899_51368938
WTC11_00023514	chr13	-	7351	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	-1	0	1	multi-exon	FALSE	canonical	3	170	junction_14	17.7301963212959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAATTATTTTTATGG	-51448396	True	NA	-10	True	AATAAA	-19	NA	51453036	51361575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
WTC11_00023519	chr13	-	15181	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	247	0	-247	multi-exon	FALSE	canonical	3	210	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTTTTACAAAGTCAA	-51448375	True	NA	NA	False	NA	NA	NA	51453015	51436672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51451175_51451977_51452056_51452414
WTC11_00023520	chr13	-	1973	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	-3	0	1	multi-exon	FALSE	canonical	3	53	junction_6	26.7421550579391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCAGGTTCTTTTC	-51803094	True	NA	-6	True	AATAAA	-35	NA	51804157	51767991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
WTC11_00023521	chr13	-	1120	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_7	26.6739573366983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCAGGTTCTTTTC	-51803100	True	NA	-6	True	AATAAA	-35	NA	51804163	51767991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
WTC11_00023525	chr13	-	5718	14	FSM	ENSG00000123191.16	ENST00000634810.1	5825	14	112	-5	112	0	multi-exon	FALSE	canonical	3	13	junction_13	6.1845388437667	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGTGAGTGAGATGC	NA	False	NA	0	True	AATAAA	-23	NA	51959898	51932668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51935030_51935592_51935696_51937275_51937394_51937475_51937680_51939050_51939194_51941080_51941225_51942385_51942555_51944108_51944292_51946283_51946479_51949661_51949797_51950006_51950162_51950271_51950400_51957515_51957608_51958310
WTC11_00023526	chr13	-	6598	21	FSM	ENSG00000123191.16	ENST00000242839.10	6598	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	7.24206462274399	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGTGAGTGAGATGC	-52011431	False	NA	0	True	AATAAA	-23	NA	52011450	51932668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51935030_51935592_51935696_51937275_51937394_51937475_51937680_51939050_51939194_51941080_51941225_51942385_51942555_51944108_51944292_51946283_51946479_51949661_51949797_51950006_51950162_51950271_51950400_51957515_51957608_51958310_51958545_51960147_51960323_51961836_51961914_51964871_51965034_51968443_51968608_51970491_51970750_51973934_51975169_52011286
WTC11_00023527	chr13	-	3861	3	FSM	ENSG00000197168.14	ENST00000529080.5	4040	3	179	0	179	0	multi-exon	FALSE	canonical	2	2	junction_2	1	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCTTCTTAATGTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	52061953	52033610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52037219_52050103_52050222_52061818
WTC11_00023528	chr13	-	2339	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	14	-225	0	217	multi-exon	FALSE	canonical	3	79	junction_6	38.7013637428393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAATGGTAAATATCAG	-52156463	True	NA	NA	False	NA	NA	NA	52159583	52132421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
WTC11_00023530	chr13	-	2415	16	FSM	ENSG00000136098.17	ENST00000618534.4	2414	16	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_15	52.4491711617596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	-52156415	True	NA	-8	True	ATTAAA	-20	NA	52159535	52132642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159197
WTC11_00023534	chr13	-	2717	9	NIC	ENSG00000243406.6	novel	3494	9	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	10.0739453542294	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAATGTGGCTTGGTCTG	-52193359	True	NA	NA	False	AATAAA	-12	NA	52194452	52167714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52169305_52169986_52170057_52171157_52171249_52175638_52175777_52180581_52180655_52183975_52184115_52186682_52186824_52189638_52189915_52194253
WTC11_00023535	chr13	-	368	1	FSM	ENSG00000285160.1	ENST00000645806.1	368	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAATCAGCCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	52168321	52167953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52168000_52168300
WTC11_00023536	chr13	-	2620	4	FSM	ENSG00000136114.17	ENST00000349258.8	3189	4	341	228	19	-196	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTACACAGCTGGGGTC	-52406110	True	NA	NA	False	NA	NA	NA	52406153	52377394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52378790_52397231_52398195_52402542_52402682_52406030
WTC11_00023537	chr13	-	4427	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	-2	0	-2	multi-exon	TRUE	canonical	3	139	junction_8	20.2121880156182	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTGAGCAGTTTT	-52447173	True	NA	0	True	AATAAA	-26	NA	52450634	52412603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
WTC11_00023538	chr13	-	4616	15	NNC	ENSG00000136100.14	novel	4425	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	57.1926568713152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-52447167	True	NA	-2	True	AATAAA	-24	NA	52450628	52412605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52429235_52429433_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
WTC11_00023539	chr13	-	378	4	FSM	ENSG00000136100.14	ENST00000492650.1	540	4	0	162	0	-162	multi-exon	FALSE	canonical	3	28	junction_3	76.1766951822464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAACTAAACCTATGTG	NA	False	NA	NA	False	NA	NA	NA	52429367	52425931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52426067_52426988_52427067_52427186_52427220_52429235
WTC11_00023540	chr13	-	626	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	-71	2	-71	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTTTGTGTTTGTGTGG	-52455297	False	NA	-3	True	GATAAA	-16	NA	52455402	52454776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52454800_52455400
WTC11_00023544	chr13	-	1672	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-179	55871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	358.690816777927	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGAGCTTTTCCCTTTT	-52739968	False	NA	NA	False	NA	NA	NA	52739999	52647392	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52647431_52703263_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023545	chr13	-	1671	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-179	55871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	358.690816777927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGAGCTTTTCCCTTTT	-52739968	False	NA	NA	False	NA	NA	NA	52739999	52647392	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52647430_52703263_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023546	chr13	-	1685	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-179	55871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.522570846351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGAGCTTTTCCCTTTT	-52739968	False	NA	NA	False	NA	NA	NA	52739999	52647392	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52647439_52703270_52703811_52708535_52708715_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023547	chr13	-	1002	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	-28	1	-28	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTCTTGGTCATA	-52652001	True	NA	NA	False	AATAAA	-15	NA	52652307	52651305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52651300_52652300
WTC11_00023548	chr13	-	1661	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-179	43449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	358.690816777927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-52739968	False	NA	NA	False	NA	NA	NA	52739999	52659814	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52659849_52703270_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023549	chr13	-	1325	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	3	119	junction_3	374.713437175664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTCAATTGTACACTT	-52730503	True	NA	-14	True	AATAAA	-23	NA	52739808	52703267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52703811_52708535_52708703_52712715_52712870_52733218_52733360_52739030_52739172_52739629
WTC11_00023550	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	329.912109507972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52730507	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023551	chr13	-	1455	7	FSM	ENSG00000136110.13	ENST00000377962.8	1455	7	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_4	117.023383228405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52730515	True	NA	-10	True	AATAAA	-27	NA	52739820	52703263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
WTC11_00023554	chr13	-	1121	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	2	109	combination_of_known_junctions	FALSE	canonical	3	1104	junction_1	1248.13220453604	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATAAATTACTTCTAAAA	-54118078	True	NA	NA	False	AATAAA	-18	NA	54132849	54115673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
WTC11_00023555	chr13	-	1005	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	0	69	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	359.511705882669	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCCCTCAAATTTGAAT	-54118095	True	NA	66	True	NA	NA	NA	54132866	54115713	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54132612
WTC11_00023556	chr13	-	1119	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	1684.58576139655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118080	True	NA	-3	True	CATAAA	-23	NA	54132851	54115782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
WTC11_00023557	chr13	-	1504	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	-671	0	0	multi-exon	FALSE	canonical	3	758	junction_1	1410.41042096106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	-54118048	True	NA	0	True	ATTAAA	-18	NA	54132819	54124323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
WTC11_00023558	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1612.78826880654	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	-54118091	True	NA	0	True	ATTAAA	-18	NA	54132862	54124323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
WTC11_00023560	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	163.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	-54118095	True	NA	NA	False	AATAAA	-26	NA	54132866	54126861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54127430_54130873_54131072_54132612
WTC11_00023561	chr13	-	1505	3	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	15.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGATTTGGGCCTACA	-54268822	True	NA	NA	False	ATTAAA	-14	NA	54269325	54241045	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_54242387_54268138_54268219_54269241
WTC11_00023562	chr13	-	3156	2	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGATATTTCCTCTAAAT	-54268322	False	NA	NA	False	TATAAA	-14	NA	54268446	54242640	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_54245489_54268138
WTC11_00023563	chr13	-	612	1	FSM	ENSG00000136149.6	ENST00000484130.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	NA	False	NA	NA	False	AATACA	-36	NA	54441315	54440703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54440700_54441300
WTC11_00023564	chr13	-	4799	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-216	3796	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	88.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGATTGATAACTTTT	-55583691	False	NA	NA	False	AGTAAA	-16	NA	55583740	55531900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_55536347_55581427_55581530_55583489
WTC11_00023565	chr13	-	4834	3	FSM	ENSG00000274090.1	ENST00000617598.1	809	3	-229	-3796	-229	3796	multi-exon	FALSE	canonical	3	39	junction_2	19.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGATTGATAACTTTT	-55583704	False	NA	NA	False	AGTAAA	-16	NA	55583753	55531900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_55536347_55554860_55554985_55583489
WTC11_00023566	chr13	-	1811	2	Genic_Genomic	ENSG00000274090.1	novel	809	3	NA	NA	-234	-41387	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACATACCCAGACTCTC	-55583709	False	NA	NA	False	NA	NA	NA	55583758	55577083	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_55578623_55583486
WTC11_00023568	chr13	-	3576	2	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	55660492	55654966	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_55658259_55660208
WTC11_00023569	chr13	-	399	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATCCAGCAAGGCGCC	NA	False	NA	NA	False	NA	NA	NA	56040648	56040249	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_56040200_56040600
WTC11_00023570	chr13	-	4746	28	NNC	ENSG00000139734.19	novel	4745	28	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	109	junction_11	14.5975738818925	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTTTGTCTCTCTTT	-60159077	True	NA	NA	False	AATAAA	-30	NA	60163928	59665581	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833271_59839322_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
WTC11_00023571	chr13	-	4746	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_5	29.3484809374068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTTTGTCTCTCTTT	-60159077	True	NA	NA	False	AATAAA	-30	NA	60163928	59665581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
WTC11_00023577	chr13	-	276	1	FSM	ENSG00000265745.2	ENST00000492442.3	298	1	-36	58	-36	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGAATAGCCACT	NA	False	NA	NA	False	ATTAAA	-26	NA	60034798	60034522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_60034500_60034800
WTC11_00023578	chr13	-	4520	2	FSM	ENSG00000280165.1	ENST00000409204.4	4778	2	258	0	258	0	multi-exon	FALSE	canonical	3	12	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTAGTTATAGACA	NA	False	NA	NA	False	ATTAAA	-41	NA	61415264	61409684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_61413967_61415026
WTC11_00023579	chr13	-	304	1	FSM	ENSG00000236565.3	ENST00000455201.1	833	1	597	-68	597	68	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGAGAGAGTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	65788167	65787863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_65787900_65788200
WTC11_00023580	chr13	-	410	1	FSM	ENSG00000236565.3	ENST00000455201.1	833	1	35	388	35	-388	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTGGTGGCAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	65788729	65788319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_65788300_65788700
WTC11_00023581	chr13	-	2328	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	-97	0	97	multi-exon	FALSE	canonical	3	648	junction_1	22.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	-72719985	True	NA	87	True	CATAAA	-18	NA	72727629	72708269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72710346_72718951_72719098_72727523
WTC11_00023582	chr13	-	5232	21	FSM	ENSG00000083520.15	ENST00000377780.8	5232	21	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_19	61.5454913052126	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-72776332	True	NA	NA	False	NA	NA	NA	72781925	72757442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72781288_72781357_72781604
WTC11_00023583	chr13	-	10566	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	5	0	-5	multi-exon	FALSE	canonical	2	127	junction_16	33.1995481896968	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTTGGTTCTAATTGC	-72776307	True	NA	-9	True	AATAAA	-12	NA	72781900	72752173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
WTC11_00023584	chr13	-	675	3	FSM	ENSG00000083520.15	ENST00000475871.1	716	3	41	0	41	0	multi-exon	FALSE	canonical	1	2	junction_1	22.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAGGAATATTACGTTA	-72782039	False	NA	NA	False	NA	NA	NA	72782053	72780845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72781004_72781288_72781357_72781604
WTC11_00023585	chr13	-	414	1	FSM	ENSG00000236972.2	ENST00000423401.1	411	1	-13	10	-13	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAAATTCCATCATC	-73100967	False	NA	NA	False	AAAAAG	-2	NA	73100998	73100584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_73100600_73101000
WTC11_00023586	chr13	-	10820	8	FSM	ENSG00000118922.18	ENST00000377669.7	10832	8	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_7	12.9583319662269	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCTAACTGACTCAGACA	-74133871	False	NA	-10	True	AATAAA	-21	NA	74133917	73686088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_73695672_73715367_73715526_73764937_73765001_73813151_73813288_73845826_73846374_73943980_73944071_73994989_73995054_74133738
WTC11_00023587	chr13	-	7872	19	FSM	ENSG00000136111.14	ENST00000377625.6	6182	19	-540	-1150	-485	-12	multi-exon	FALSE	canonical	3	91	junction_18	16.2989055150232	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATACACTGTATCT	-75482360	True	NA	NA	False	TATAAA	-42	NA	75482654	75283514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75287026_75288933_75289111_75292101_75292272_75294853_75295014_75299329_75299575_75302242_75302402_75306312_75306472_75309941_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
WTC11_00023588	chr13	-	1661	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	8	0	-3	multi-exon	FALSE	canonical	3	2167	junction_2	49.4660377318508	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTTGTCTTTTGAATT	-75511805	True	NA	NA	False	AATAAA	-9	NA	75537841	75525221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
WTC11_00023591	chr13	-	714	4	NIC	ENSG00000188243.14	novel	486	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	1037.09733819391	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511790	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_75526640_75530113_75530267_75537381_75537676_75537763
WTC11_00023592	chr13	-	374	4	FSM	ENSG00000188243.14	ENST00000486516.5	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1032.33403293486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511790	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530310_75530406_75537663_75537676_75537763
WTC11_00023593	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1095.24883017513	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
WTC11_00023594	chr13	-	437	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	-45	0	-42	0	multi-exon	FALSE	canonical	3	11	junction_2	1034.28762386915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511850	True	NA	-21	True	AATAAA	-18	NA	75537886	75526435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
WTC11_00023595	chr13	-	6236	1	FSM	ENSG00000178695.6	ENST00000377474.4	6231	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGCTCCTTGGCATG	-76886392	False	NA	-2	True	AATAAA	-22	NA	76886405	76880169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_76880200_76886400
WTC11_00023596	chr13	-	3514	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	-8	0	8	multi-exon	FALSE	canonical	3	52	junction_4	10.8943792847505	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTTTTTAAAAACTACAC	-77025662	True	NA	3	True	AATAAA	-23	NA	77027159	77005251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
WTC11_00023599	chr13	-	12757	68	NIC	ENSG00000005810.19	novel	15077	83	NA	NA	22187	314	combination_of_known_splicesites	TRUE	canonical	1	2	junction_65	17.098707057119	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCCAGGCTGGAGTAC	-77251303	True	NA	NA	False	NA	NA	NA	77251324	77044342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_77045494_77050996_77051163_77051810_77051919_77055557_77055768_77056985_77057094_77058217_77058407_77059522_77059627_77061168_77061302_77061661_77061791_77062595_77062698_77064614_77064735_77065991_77066089_77067580_77067865_77068564_77068832_77070630_77070712_77076750_77076850_77077147_77077388_77078823_77078890_77081426_77081652_77081836_77081994_77083031_77083193_77087483_77087634_77088831_77089032_77090105_77090264_77093164_77093333_77095357_77095603_77096311_77096482_77097369_77099014_77121372_77121496_77125335_77125469_77126317_77126543_77139195_77139337_77140046_77140164_77140845_77140944_77144444_77144561_77146161_77146218_77150733_77150950_77156057_77156203_77157936_77158110_77161905_77161956_77164453_77164542_77165272_77165392_77166328_77166555_77168427_77168647_77169613_77169715_77171491_77171635_77174310_77174490_77176496_77176629_77177747_77177955_77180126_77180319_77181700_77181923_77185102_77185378_77185870_77186064_77188950_77189048_77190251_77190336_77191678_77191814_77194152_77194245_77205255_77205384_77205472_77205599_77206652_77206826_77211166_77211321_77211955_77212161_77217839_77217958_77224450_77224533_77225434_77225555_77243058_77243161_77243805_77243952_77251150
WTC11_00023600	chr13	-	3660	22	FSM	ENSG00000005810.19	ENST00000429715.1	3660	22	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	12.6702465403121	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTTAGGACAGCATA	-77087502	False	NA	NA	False	TTTAAA	-12	NA	77087514	77044901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77045494_77050996_77051163_77051810_77051919_77055557_77055768_77056985_77057094_77058217_77058407_77059522_77059627_77061168_77061302_77061661_77061791_77062595_77062698_77064614_77064735_77065991_77066089_77067580_77067865_77068564_77068832_77070630_77070712_77076759_77076850_77077147_77077388_77078823_77078890_77081426_77081652_77081836_77081994_77083031_77083193_77087483
WTC11_00023601	chr13	-	531	2	FSM	ENSG00000005810.19	ENST00000491491.1	649	2	118	0	118	0	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTAAAGCTGCTGGTAA	-77326291	False	NA	NA	False	AAGAAA	-45	NA	77326932	77296602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77296675_77326473
WTC11_00023602	chr13	-	4305	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	-5	0	-1	multi-exon	FALSE	canonical	3	645	junction_6	342.568930614296	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGACTGTGTGTTTCATT	-77913091	True	NA	-1	True	ATTAAA	-23	NA	77918831	77895481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
WTC11_00023603	chr13	-	4441	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	30	0	15	multi-exon	FALSE	canonical	3	179	junction_7	418.471611696562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATGCCACATTTCT	NA	False	NA	-30	True	AATATA	-29	NA	77919768	77895510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
WTC11_00023604	chr13	-	681	5	FSM	ENSG00000136160.17	ENST00000645696.1	681	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	491.468208534387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCACTGTATTTCATTT	-77903542	True	NA	-12	True	AATAAA	-24	NA	77903568	77898191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77898335_77899858_77899968_77901057_77901208_77903155_77903361_77903494
WTC11_00023605	chr13	-	3515	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	-8	0	8	multi-exon	FALSE	canonical	3	173	junction_1	20.0259831219344	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGATGATGATTCTTTGT	-78655358	True	NA	-5	True	AATAAA	-28	NA	78659155	78614280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
WTC11_00023607	chr13	-	7703	23	NNC	ENSG00000139746.16	novel	5152	21	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	35.7178162363577	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAGTTGTTAACGTT	-79401292	True	NA	-21	True	AATAAA	-9	NA	79406221	79311834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79314994_79318820_79318880_79319534_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
WTC11_00023608	chr13	-	5152	21	FSM	ENSG00000139746.16	ENST00000438724.5	5152	21	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_14	23.0249321388794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-79401292	True	NA	NA	False	NA	NA	NA	79406221	79318867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
WTC11_00023610	chr13	-	5258	22	FSM	ENSG00000139746.16	ENST00000438737.3	5258	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	44.072965680277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-79401326	False	NA	NA	False	NA	NA	NA	79406255	79318867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
WTC11_00023611	chr13	-	12432	21	FSM	ENSG00000139746.16	ENST00000267229.11	3624	21	-689	-8119	0	-11	multi-exon	FALSE	canonical	3	53	junction_9	28.9786128032382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAGTTGTTAACGTT	NA	False	NA	-21	True	AATAAA	-9	NA	79406477	79311834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
WTC11_00023613	chr13	-	2310	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	-24	0	24	multi-exon	FALSE	canonical	3	186	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTCTTTCAAGTGTAA	-80337730	True	NA	2	True	ATTAAA	-25	NA	80341126	80335951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_80337757_80340621
WTC11_00023615	chr13	-	271	1	FSM	ENSG00000282993.1	ENST00000634391.1	234	1	8	-45	8	45	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92659219	92658948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_92658900_92659200
WTC11_00023617	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	20.3571418214959	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593315	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
WTC11_00023619	chr13	-	6236	31	FSM	ENSG00000125257.16	ENST00000645237.2	5855	31	-381	0	-357	0	multi-exon	TRUE	canonical	3	30	junction_18	9.56550515597001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGATCTGTATTTCTG	NA	False	NA	-5	True	AATAAA	-19	NA	95301832	95019834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95021683_95034604_95034740_95043681_95043788_95044265_95044439_95053094_95053185_95062703_95062860_95071661_95071854_95073203_95073305_95074213_95074325_95075431_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
WTC11_00023621	chr13	-	2903	21	FSM	ENSG00000125257.16	ENST00000629385.1	2903	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.4990216975184	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTCTTAACAATTT	-95301004	True	NA	NA	False	ATTAAA	-22	NA	95301446	95095943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
WTC11_00023623	chr13	-	7491	23	FSM	ENSG00000134874.18	ENST00000376829.7	7491	23	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_21	30.2059391565728	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGAAAATGATTAGTAT	-95643889	True	NA	NA	False	AATAAA	-25	NA	95644706	95578201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
WTC11_00023625	chr13	-	1580	6	FSM	ENSG00000134874.18	ENST00000466027.1	1580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5735036007657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGGTGGCCTAAAGT	-95643849	True	NA	NA	False	AGTAAA	-15	NA	95644666	95637008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95637177_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
WTC11_00023626	chr13	-	2908	2	FSM	ENSG00000247400.5	ENST00000499499.2	2908	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTCACTGTATTTTTT	-95676605	True	NA	NA	False	AGTAAA	-17	NA	95676925	95672834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95674669_95675851
WTC11_00023627	chr13	-	1161	7	NNC	ENSG00000102595.21	novel	4850	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	26.3211997362498	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	NA	False	NA	4	True	AATAAA	-21	NA	95859895	95801579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854396_95856157_95856341_95859590
WTC11_00023628	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_8	52.3120365592382	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-96048565	True	NA	4	True	AATAAA	-21	NA	96053401	95801579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
WTC11_00023631	chr13	-	1553	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	-6	0	0	multi-exon	FALSE	canonical	3	102	junction_1	34.5814479628872	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	-96048564	True	NA	NA	False	AATAAA	-22	NA	96053400	95984903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
WTC11_00023633	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	65.4800172041916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	-96048557	True	NA	NA	False	NA	NA	NA	96053393	95990144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
WTC11_00023634	chr13	-	2286	4	FSM	ENSG00000165621.9	ENST00000298440.5	2285	4	0	-1	0	1	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATAGGCTGTTTGGTCA	-96994334	False	NA	NA	False	AATAAA	-15	NA	96994350	96985717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_96987834_96989757_96989810_96992507_96992573_96994297
WTC11_00023635	chr13	-	9512	11	FSM	ENSG00000102572.15	ENST00000539966.6	9605	11	0	93	0	-93	multi-exon	TRUE	canonical	3	593	junction_10	75.8725246713196	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGCCACTGAATTGTT	-98562294	True	NA	NA	False	NA	NA	NA	98577107	98445277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98453210_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242_98519474_98576744
WTC11_00023636	chr13	-	3032	21	ISM	ENSG00000088386.17	ENST00000376503.10	3124	23	26223	-3	118	3	3prime_fragment	TRUE	canonical	2	8	junction_2	3.06594194335118	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTCATGTATCTCTG	NA	False	NA	-3	True	AATAAA	-17	NA	98726449	98683797	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367
WTC11_00023638	chr13	-	2669	12	NIC	ENSG00000088387.21	novel	7549	57	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	19.7827038571785	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTGGCTGCTGGGTG	-98829445	False	NA	-3	True	ATTAAA	-42	NA	98829455	98793488	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_98794749_98797114_98797254_98797388_98797490_98800287_98800479_98804998_98805210_98807660_98807808_98809351_98809466_98810168_98810292_98824397_98824505_98825871_98825941_98826829_98826888_98829306
WTC11_00023639	chr13	-	8331	53	NIC	ENSG00000088387.21	novel	7523	57	NA	NA	-638	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	12.5944361717866	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTGGCTGCTGGGTG	-99087240	False	NA	-3	True	ATTAAA	-42	NA	99087263	98793488	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_98794749_98797114_98797254_98797388_98797490_98800287_98800479_98804998_98805210_98807660_98807808_98809351_98809466_98810168_98810292_98824397_98824505_98826829_98826888_98829306_98829523_98829642_98829757_98831347_98831531_98831648_98831787_98837493_98837610_98845923_98846061_98848591_98848640_98850046_98850114_98853407_98853523_98855897_98856032_98860404_98860523_98863018_98863133_98863369_98863549_98867424_98867537_98867927_98868012_98868230_98868378_98879897_98879970_98880546_98880673_98881557_98881628_98881891_98882008_98883041_98883132_98883812_98883900_98884970_98885093_98885707_98885832_98886531_98886625_98888157_98888224_98888359_98888548_98888631_98888712_98897487_98897611_98898178_98898262_98901777_98901901_98902287_98902492_98902971_98903113_98904631_98904707_98914327_98914396_98915328_98915504_98920953_98921089_98922050_98922147_98923301_98923372_98925836_98925920_98930167_98930258_98955434_98955552_99086222
WTC11_00023643	chr13	-	1744	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	16	5	8	-2	multi-exon	FALSE	canonical	3	31	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGTCTTAGCATCAGG	-99200175	True	NA	-17	True	AATAAA	-14	NA	99200685	99196378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99197803_99200365
WTC11_00023644	chr13	-	386	1	FSM	ENSG00000218502.3	ENST00000394213.2	387	1	25	-24	25	24	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGACTCTAAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	99215733	99215347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99215300_99215700
WTC11_00023645	chr13	-	872	2	FSM	ENSG00000203441.2	ENST00000366259.2	872	2	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTGAACCCGGGAGGC	-99501025	False	NA	NA	False	NA	NA	NA	99501052	99499726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99499941_99500394
WTC11_00023646	chr13	-	5540	2	FSM	ENSG00000139800.9	ENST00000267294.5	4497	2	-1040	-3	-1040	3	multi-exon	FALSE	canonical	3	371	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTCCCTTGGTCTCT	-99972732	False	NA	32	True	AATAGA	-20	NA	99972807	99962960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99965820_99970126
WTC11_00023647	chr13	-	1662	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	17	-641	0	641	multi-exon	FALSE	canonical	3	205	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGGTGAAACCCCATCT	-100086920	True	NA	NA	False	NA	NA	NA	100088950	100085383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100086728_100088632
WTC11_00023648	chr13	-	461	1	FSM	ENSG00000228501.2	ENST00000432924.2	612	1	-21	172	-21	-172	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGGATCACCAAATCAG	NA	False	NA	NA	False	CATAAA	-24	NA	100151113	100150652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100150700_100151100
WTC11_00023650	chr13	-	386	3	FSM	ENSG00000134864.11	ENST00000471912.1	393	3	7	0	7	0	multi-exon	FALSE	canonical	3	8	junction_2	2.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCAGCCTTTCGGGCGCG	-100588523	True	NA	NA	False	NA	NA	NA	100588724	100532513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100532602_100583824_100583998_100588599
WTC11_00023651	chr13	-	460	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	-26	-86	-26	86	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGACCAGATGGCTTCA	-100540262	False	NA	NA	False	AATAAA	-35	NA	100540274	100539814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100539800_100540300
WTC11_00023652	chr13	-	4036	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	-124	-1	-40	1	multi-exon	FALSE	canonical	3	101	junction_2	29.0688837074973	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTTTTTTTTTTGA	-100673102	True	NA	-1	True	AATAAA	-17	NA	100674919	100603623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
WTC11_00023653	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	39.9998269892452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	-100673062	True	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
WTC11_00023655	chr13	-	2733	7	FSM	ENSG00000125247.16	ENST00000489713.5	2733	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	16.627453870699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGCAAAATTCTTTAAA	-100638797	False	NA	NA	False	AATAAA	-12	NA	100638808	100624909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537
WTC11_00023658	chr13	-	5004	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-134	19135	-50	2150	5prime_fragment	FALSE	canonical	3	125	junction_9	20.7906228862918	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGTGGTTGCATGTA	-100673112	True	NA	NA	False	AATAAA	-22	NA	100674929	100622759	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
WTC11_00023661	chr13	-	1812	1	Genic_Genomic	ENSG00000125247.16	novel	NA	NA	NA	NA	-1791	-6494	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGTCCGTCTGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	100676884	100675072	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_100675100_100676900
WTC11_00023662	chr13	-	554	1	FSM	ENSG00000276957.1	ENST00000615349.1	536	1	-55	37	-55	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACTTTGATATTAAAT	-102593833	False	NA	-37	True	AAAAAG	-17	NA	102593928	102593374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102593400_102593900
WTC11_00023663	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	26.0353605698097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	-102772290	True	NA	1	True	AATAAA	-15	NA	102773786	102765887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
WTC11_00023664	chr13	-	1689	4	FSM	ENSG00000151287.17	ENST00000376019.5	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	14.9740516301441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102768774	False	NA	0	True	ATTAAA	-23	NA	102770270	102766109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310
WTC11_00023665	chr13	-	1253	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	4	-219	0	-3	multi-exon	FALSE	canonical	3	51	junction_4	60.0187470712277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGTGTTCACTGAAGG	-102772259	True	NA	-2	True	AATAAA	-12	NA	102773755	102765890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
WTC11_00023667	chr13	-	885	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	-57	0	-1	0	multi-exon	FALSE	canonical	3	24	junction_1	80.6597793203031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772316	True	NA	0	True	ATTAAA	-23	NA	102773812	102766109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
WTC11_00023668	chr13	-	2030	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	-1	0	1	multi-exon	FALSE	canonical	3	154	junction_6	10.9217192152739	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGTGCTAATTATTAG	-102797630	True	NA	-1	True	AATAAA	-22	NA	102798976	102784279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
WTC11_00023669	chr13	-	5009	5	FSM	ENSG00000125266.8	ENST00000646441.1	4995	5	0	-14	0	14	multi-exon	FALSE	canonical	3	42	junction_4	5.70087712549569	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTCTTTTCTTTTCA	-106532185	True	NA	1	True	AATAAA	-37	NA	106535662	106489730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_106493429_106494880_106494995_106495747_106495841_106512528_106512813_106534842
WTC11_00023670	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	251.142721707532	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	-106547822	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
WTC11_00023671	chr13	-	1813	5	NIC	ENSG00000134884.15	novel	821	5	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_3	619.702146196058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106568166	False	NA	-7	True	AATAAA	-35	NA	106568183	106543326	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_106544161_106557047_106557132_106557558_106557617_106559431_106559658_106567572
WTC11_00023672	chr13	-	4009	3	FSM	ENSG00000134884.15	ENST00000472226.2	4009	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_2	41	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106547822	True	NA	-7	True	AATAAA	-35	NA	106568137	106543326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_106544161_106557047_106559658_106567572
WTC11_00023674	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-108214954	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_108211297_108214537_108214611_108215483
WTC11_00023675	chr13	-	8132	2	FSM	ENSG00000185950.9	ENST00000375856.5	8156	2	15	9	15	-9	multi-exon	FALSE	canonical	3	67	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGAAGGTGATTTTTA	-109783078	True	NA	NA	False	AATAAA	-9	NA	109786568	109752703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_109756309_109782041
WTC11_00023676	chr13	-	6541	52	FSM	ENSG00000187498.16	ENST00000375820.10	6540	52	0	-1	0	1	multi-exon	FALSE	canonical	3	132	junction_38	55.8764702786052	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTTATTTTGCACTT	-110302735	True	NA	-6	True	AATAAA	-24	NA	110307157	110148961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110150445_110152333_110152507_110155282_110155398_110161191_110161370_110162229_110162443_110163462_110163562_110164861_110164991_110166231_110166304_110167157_110167231_110169628_110169763_110170546_110170733_110172719_110172771_110173899_110173999_110174445_110174527_110174622_110174750_110175217_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
WTC11_00023678	chr13	-	1509	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	-2	0	2	multi-exon	FALSE	canonical	3	113	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGACTGAACTGACTT	-110559605	True	NA	1	True	ATTAAA	-24	NA	110561722	110523063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110524198_110561347
WTC11_00023680	chr13	-	1488	8	FSM	ENSG00000134905.17	ENST00000540006.5	1485	8	0	-3	0	3	multi-exon	FALSE	canonical	3	12	junction_4	134.826721750398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCGTCTGTTTGTTAG	-110663849	False	NA	-1	True	ATTAAA	-22	NA	110663861	110641408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110641609_110642314_110642522_110644064_110644183_110644384_110644607_110645966_110646091_110647100_110647240_110651033_110651101_110663450
WTC11_00023681	chr13	-	1846	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	-8	0	3	multi-exon	FALSE	canonical	3	247	junction_6	36.5971589172756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCGTCTGTTTGTTAG	-110701149	True	NA	-1	True	ATTAAA	-22	NA	110706116	110641408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
WTC11_00023690	chr13	-	338	1	NIC	ENSG00000134905.17	novel	756	3	NA	NA	-1196	-1843	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGGCACGTTTGTCAA	-110707668	False	NA	NA	False	NA	NA	NA	110707701	110707363	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110707400_110707700
WTC11_00023691	chr13	-	3256	3	NNC	ENSG00000088448.14	novel	446	2	NA	NA	-1314	50773	intron_retention	FALSE	non_canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGACTGTGTAATT	-110902000	False	NA	NA	False	NA	NA	NA	110902053	110827766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110827804_110892698_110894394_110900529
WTC11_00023692	chr13	-	3593	6	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_3	326.393995042801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897595	True	NA	-1	True	AATAAA	-16	NA	110915037	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110880113_110883697_110883794_110893027_110894394_110906032_110906125_110910617_110910771_110914724
WTC11_00023693	chr13	-	12681	5	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	315.607747053205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897595	True	NA	-1	True	AATAAA	-16	NA	110915037	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110883794_110893027_110894394_110900529_110906125_110910617_110910771_110914724
WTC11_00023694	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	286.883530374262	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897627	True	NA	-1	True	AATAAA	-16	NA	110915069	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
WTC11_00023695	chr13	-	641	3	FSM	ENSG00000088448.14	ENST00000485844.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGTTTGGGGACACTGCT	-110893072	False	NA	NA	False	NA	NA	NA	110893082	110879767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110880113_110883552_110883794_110893027
WTC11_00023698	chr13	-	6128	3	NNC	ENSG00000088448.14	novel	446	2	NA	NA	-1314	3708	intron_retention	FALSE	non_canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTTAAAAACTGACCCA	-110902000	False	NA	NA	False	NA	NA	NA	110902053	110888983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110891892_110892697_110894394_110900529
WTC11_00023699	chr13	-	5003	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	0	3708	intron_retention	FALSE	non_canonical	0	0	junction_1	175.619617355237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTTAAAAACTGACCCA	-110897627	True	NA	NA	False	NA	NA	NA	110915069	110888983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110891892_110892697_110894203_110906032_110906125_110910617_110910771_110914724
WTC11_00023700	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	137.812372448921	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	-110897564	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
WTC11_00023705	chr13	-	4090	23	FSM	ENSG00000126216.15	ENST00000649778.1	4111	23	21	0	21	0	multi-exon	FALSE	canonical	2	2	junction_9	62.5512847441241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGCAATTATCTTT	-112584036	True	NA	-27	True	CATAAA	-35	NA	112588184	112485032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112521662_112521865_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
WTC11_00023706	chr13	-	2723	21	FSM	ENSG00000126216.15	ENST00000375669.7	2723	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	46.0593095910045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATCTCCTGCCCGTT	-112583977	True	NA	NA	False	AATAAA	-25	NA	112588125	112498806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112498937_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
WTC11_00023708	chr13	-	2461	10	FSM	ENSG00000126216.15	ENST00000464139.5	2461	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	22.4999314127898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGAACTCTTCATGTGC	-112583987	True	NA	-3	True	AATAAA	-21	NA	112588135	112546481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
WTC11_00023709	chr13	-	3627	1	FSM	ENSG00000277159.1	ENST00000613809.1	3590	1	-38	1	-38	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGGGGGAGTTTCTTG	-112606272	True	NA	NA	False	AATAAA	-20	NA	112606455	112602828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112602800_112606500
WTC11_00023710	chr13	-	5347	8	FSM	ENSG00000126226.22	ENST00000493650.5	4202	8	-1072	-73	-1072	0	multi-exon	FALSE	canonical	3	203	junction_1	213.608740171256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTATGGCTCACTCTA	-113189665	False	NA	53	True	AATACA	-19	NA	113189680	113177538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484
WTC11_00023712	chr13	-	1786	15	FSM	ENSG00000126226.22	ENST00000246505.9	1786	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	246.207437013621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-113200430	True	NA	-20	True	AATAAA	-20	NA	113208669	113177611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196226_113197018_113197244_113198190_113198265_113200426_113200517_113208598
WTC11_00023714	chr13	-	1836	14	NNC	ENSG00000126226.22	novel	1786	15	NA	NA	-15	0	intron_retention	FALSE	non_canonical	1	271	junction_10	155.667868255143	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-113200445	True	NA	-20	True	AATAAA	-20	NA	113208684	113177611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
WTC11_00023715	chr13	-	1744	15	NNC	ENSG00000126226.22	novel	1671	15	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	1	227	junction_1	198.497005580663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTCACTCTAGCCTT	-113200472	True	NA	58	True	AATACA	-24	NA	113208711	113177533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
WTC11_00023716	chr13	-	1798	15	NNC	ENSG00000126226.22	novel	1937	15	NA	NA	-97	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	203	junction_1	202.598829498805	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTGTTGGTTAAAAAAAA	-113208800	False	NA	-21	True	AATAAA	-19	NA	113208812	113177612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
WTC11_00023717	chr13	-	1218	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	4	-33	combination_of_known_splicesites	FALSE	canonical	3	138	junction_5	146.125136631435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATCAGTTTCTCAGC	-113358052	True	NA	-35	True	AATAAA	-18	NA	113364126	113324196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
WTC11_00023718	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	27.5206786817121	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358056	True	NA	-1	True	NA	NA	NA	113364130	113324162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
WTC11_00023721	chr13	-	2072	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	0	1144	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	235.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCATTGTCTACAAAGT	-113358056	True	NA	59	True	TATAAA	-13	NA	113364130	113358472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113360285_113363761_113363911_113364019
WTC11_00023724	chr13	-	3164	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	23.4015523643459	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488928	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
WTC11_00023727	chr13	-	3549	8	NIC	ENSG00000150401.15	novel	3164	8	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	24.2646967878043	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGCGTGGTTTCCTTTCG	-113490649	True	NA	-6	True	ATTAAA	-11	NA	113490941	113455823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484197_113490666
WTC11_00023733	chr13	-	2145	7	FSM	ENSG00000183087.15	ENST00000480426.5	2507	7	362	0	362	0	multi-exon	FALSE	canonical	3	154	junction_5	9.4809751022186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCGTGGCCGTCATCTG	-113833356	False	NA	-3	True	AATAAA	-23	NA	113833379	113820548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633
WTC11_00023734	chr13	-	2510	15	FSM	ENSG00000183087.15	ENST00000327773.7	2508	15	0	-2	0	2	multi-exon	FALSE	canonical	3	140	junction_14	15.2080805588909	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTGGCCGTCATCTGCT	-113860923	True	NA	-1	True	AATAAA	-25	NA	113864076	113820546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512_113835636_113838068_113838192_113839727_113839851_113846526_113846590_113848025_113848051_113863574_113863742_113863832
WTC11_00023735	chr13	-	2482	13	NIC	ENSG00000183087.15	novel	2508	15	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	45.0672337242431	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCGTGGCCGTCATCTG	NA	False	NA	-3	True	AATAAA	-23	NA	113864138	113820548	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512_113835636_113838068_113838192_113839727_113839851_113863574_113863742_113863832
WTC11_00023737	chr13	+	232	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTTTTTTTCTGGATA	NA	False	NA	NA	False	AATAAA	-45	NA	19201365	19201597	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_19201400_19201600
WTC11_00023738	chr13	+	285	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGGACTCTTTACAG	NA	False	NA	NA	False	NA	NA	NA	23498125	23498410	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_23498100_23498400
WTC11_00023740	chr13	+	300	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTATAAAATAATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	31657096	31657396	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_31657100_31657400
WTC11_00023741	chr13	+	471	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTTCAAAGGATTAAAG	NA	False	NA	NA	False	NA	NA	NA	34801169	34801640	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_34801200_34801600
WTC11_00023742	chr13	+	211	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAACACATCCATCCAAA	NA	False	NA	NA	False	TTTAAA	-18	NA	35310125	35310336	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_35310100_35310300
WTC11_00023743	chr13	+	253	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	36213789	36214042	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_36213800_36214000
WTC11_00023744	chr13	+	202	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAAAAGCCTGAGGTG	41384460	False	NA	NA	False	NA	NA	NA	41384474	41384676	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_41384500_41384700
WTC11_00023745	chr13	+	472	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTACTGTTAAAAACCTT	NA	False	NA	NA	False	AATAAA	-44	NA	44554182	44554654	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_44554200_44554700
WTC11_00023746	chr13	+	303	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGTTAAGACTGGTGT	NA	False	NA	NA	False	AAGAAA	-13	NA	46829564	46829867	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_46829600_46829900
WTC11_00023747	chr13	+	278	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTATGATAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	49495095	49495373	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_49495100_49495400
WTC11_00023748	chr13	+	278	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	52260371	52260649	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_52260400_52260600
WTC11_00023749	chr13	+	4278	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2046	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACTTAAAAGTACCA	NA	False	NA	NA	False	NA	NA	NA	55563190	55567468	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55563200_55567500
WTC11_00023750	chr13	+	241	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGATCCACCTGACAT	56043976	True	NA	NA	False	NA	NA	NA	56044175	56044416	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56044200_56044400
WTC11_00023751	chr13	+	218	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAATGTGGGAGGCAG	56114039	False	NA	NA	False	NA	NA	NA	56114061	56114279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56114100_56114300
WTC11_00023752	chr13	+	677	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTCCTGGGGGAGGAG	56115181	False	NA	NA	False	NA	NA	NA	56115203	56115880	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56115200_56115900
WTC11_00023753	chr13	+	1956	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATTTCCAGTATAC	NA	False	NA	NA	False	NA	NA	NA	59906438	59908394	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_59906400_59908400
WTC11_00023754	chr13	+	273	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGTTGTTCTAATA	NA	False	NA	NA	False	NA	NA	NA	70038618	70038891	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_70038600_70038900
WTC11_00023755	chr13	+	373	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACACATCACCATCAA	NA	False	NA	NA	False	TATAAA	-35	NA	73115053	73115426	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_73115100_73115400
WTC11_00023756	chr13	+	3284	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCTGGACACCTA	NA	False	NA	NA	False	NA	NA	NA	77234983	77238267	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_77235000_77238300
WTC11_00023757	chr13	+	543	1	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTACAGCTATATCTTA	86360656	False	NA	NA	False	TTTAAA	-24	NA	86360666	86361209	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_86360700_86361200
WTC11_00023758	chr13	+	284	1	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAGCTGCGGTTCAGGC	87189606	False	NA	NA	False	NA	NA	NA	87189640	87189924	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_87189600_87189900
WTC11_00023759	chr13	+	265	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGGGTTTGGCACCAC	88515078	False	NA	NA	False	NA	NA	NA	88515101	88515366	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_88515100_88515400
WTC11_00023760	chr13	+	311	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAACTACGAAACTTTCT	NA	False	NA	NA	False	NA	NA	NA	90748797	90749108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_90748800_90749100
WTC11_00023761	chr13	+	3353	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATTTTAGATAAAAGAG	NA	False	NA	NA	False	AAGAAA	-33	NA	90831161	90834514	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_90831200_90834500
WTC11_00023762	chr13	+	1712	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGACACGCCTTGTATT	NA	False	NA	NA	False	NA	NA	NA	98560290	98562002	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_98560300_98562000
WTC11_00023763	chr13	+	782	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATGCTATTGTAAA	NA	False	NA	NA	False	AATAAA	-8	NA	98812127	98812909	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_98812100_98812900
WTC11_00023765	chr13	+	1348	1	FSM	ENSG00000279730.2	ENST00000623146.2	1180	1	170	-338	170	338	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGAGTCTCCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	18297723	18299071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18297700_18299100
WTC11_00023766	chr13	+	614	1	FSM	ENSG00000228797.2	ENST00000447172.1	505	1	52	-161	52	161	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGGGCCGTTCCCATG	NA	False	NA	NA	False	AATAAA	-24	NA	18697054	18697668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18697100_18697700
WTC11_00023768	chr13	+	4795	26	NNC	ENSG00000121741.17	novel	3456	19	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	105.491990217267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATATATGTATGTATGT	19951160	True	NA	10	True	AATAAA	-17	NA	19958846	20086744	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19958960_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
WTC11_00023782	chr13	+	675	3	FSM	ENSG00000122026.11	ENST00000485756.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	20159	junction_2	174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCTGGGCTACAAAAA	27254886	False	NA	-20	True	AATAAA	-1	NA	27254943	27256548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27255355_27256183_27256335_27256435
WTC11_00023785	chr13	+	2140	4	FSM	ENSG00000186184.20	ENST00000465887.2	2118	4	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.456282095893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	27607277	True	NA	8	True	AATAAA	-14	NA	27621869	27667410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27648378_27648454_27650041_27650242_27665685
WTC11_00023793	chr13	+	640	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	63.3615616916124	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	30861035	True	NA	9	True	AATAAA	-18	NA	30863486	30883395	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30875273_30875367_30881951_30882005_30882559_30882660_30883093
WTC11_00023807	chr13	+	4400	21	NIC	ENSG00000172766.19	novel	4285	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	26.5441142251912	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308667	True	NA	14	True	AATAAA	-18	NA	41311294	41377030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41362730_41362874_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
WTC11_00023813	chr13	+	4294	10	FSM	ENSG00000133114.18	ENST00000497558.5	4294	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	38.4447655734822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGTTGTAGTATT	44986967	True	NA	2	True	AATAAA	-12	NA	44989619	45033602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45032108_45033235
WTC11_00023831	chr13	+	3202	3	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_2	21.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTTCTGCCTAATT	51152854	True	NA	10	True	AATAAA	-25	NA	51170224	51190121	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170463_51175948_51176044_51187252
WTC11_00023837	chr13	+	5476	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	-4072	0	129	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACACCAGTGTGGTTAT	52004704	True	NA	NA	False	TTTAAA	-45	NA	52012397	52033729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52028318
WTC11_00023844	chr13	+	458	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_2	14	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGACTGTTATTT	54268558	False	NA	12	True	CATAAA	-22	NA	54269364	54342279	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54335042_54335144_54341965
WTC11_00023845	chr13	+	2122	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	7	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGCTACAATTCAAGATAA	54268558	False	NA	NA	False	NA	NA	NA	54269364	54354986	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54341965_54342163_54353104
WTC11_00023847	chr13	+	13370	2	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGTCAGCAAAGGGAG	NA	False	NA	NA	False	AATAAA	-39	NA	55570234	55583728	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_55576962_55577085
WTC11_00023857	chr13	+	2269	3	NNC	ENSG00000083544.16	novel	3019	14	NA	NA	16642	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	NA	False	NA	20	True	AATAAA	-16	NA	60545604	60573871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_60547492_60567524_60567651_60573615
WTC11_00023885	chr13	+	886	4	ISM	ENSG00000125246.16	ENST00000376354.5	1127	7	-21	26375	0	0	5prime_fragment	FALSE	canonical	1	3	junction_3	46.4494946749214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	99605397	True	NA	8	True	AATAAA	-22	NA	99606668	99865238	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817
WTC11_00023886	chr13	+	966	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	1	27332	1	0	5prime_fragment	FALSE	canonical	3	89	junction_3	14.6692706021806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	99605419	True	NA	8	True	AATAAA	-22	NA	99606690	99865238	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
WTC11_00023896	chr13	+	11530	3	ISM	ENSG00000068650.19	ENST00000419631.1	2446	4	0	-3210	0	0	intron_retention	FALSE	canonical	3	113	junction_2	7.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTACATTTTCTGC	112871752	True	NA	13	True	AATAAA	-45	NA	112871767	112887168	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_112871801_112873572_112873677_112875775
WTC11_00023904	chr13	+	2183	9	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	352	9	0	0	3prime_fragment	FALSE	canonical	3	283	junction_2	84.6153059440194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114281839	False	NA	-1	True	AATAAA	-16	NA	114281952	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
WTC11_00023905	chr13	+	1802	6	FSM	ENSG00000169062.15	ENST00000475218.2	1791	6	-11	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	184.024998301861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114286254	False	NA	-1	True	AATAAA	-16	NA	114286373	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114286401_114286518_114286630_114291604_114291793_114298839_114299001_114301730_114302026_114304788
WTC11_00023908	chr13	-	444	2	FSM	ENSG00000121390.19	ENST00000497722.2	448	2	0	4	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTGTCATTTTGT	NA	False	NA	-13	True	ATTAAA	-14	NA	19677938	19674755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19674985_19677723
WTC11_00023914	chr13	-	9923	23	NNC	ENSG00000132953.18	novel	9857	23	NA	NA	0	65	at_least_one_novel_splicesite	TRUE	non_canonical	2	86	junction_3	21.4038789255091	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGCTTTTAAATACAT	-20899608	True	NA	65	True	NA	NA	NA	20902747	20777263	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_20783920_20786964_20787058_20787480_20787598_20788484_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
WTC11_00023924	chr13	-	2976	9	FSM	ENSG00000151835.17	ENST00000683367.1	3037	9	61	0	4	0	multi-exon	FALSE	canonical	3	9	junction_1	12.5099960031968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTTTAATAAAGGAAAAT	-23371784	True	NA	-39	True	TATAAA	-7	NA	23375539	23328861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23329485_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
WTC11_00023926	chr13	-	2848	9	ISM	ENSG00000151835.17	ENST00000683680.1	3660	12	21	24490	9	-4	5prime_fragment	FALSE	canonical	2	12	junction_7	14.7727578671012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTTTTAAAAGTTTT	-23432027	True	NA	NA	False	AATAAA	-16	NA	23433731	23353739	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
WTC11_00023936	chr13	-	1579	5	FSM	ENSG00000244754.9	ENST00000674180.1	1566	5	0	-13	0	0	multi-exon	FALSE	canonical	3	13	junction_4	107.894624518555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGGTCTTGTCATT	-32532822	True	NA	0	True	ATTAAA	-17	NA	32538795	32516893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538617
WTC11_00023944	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	135.540982823246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	-37000721	False	20	-12	True	AATAAA	-15	NA	37000741	36949838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
WTC11_00023947	chr13	-	1693	9	FSM	ENSG00000102710.21	ENST00000484078.5	1876	9	183	0	183	0	multi-exon	FALSE	canonical	3	146	junction_1	151.742740765415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37024754	False	NA	0	True	AATACA	-25	NA	37024764	37009311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339
WTC11_00023948	chr13	-	3523	26	NIC	ENSG00000102710.21	novel	2923	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	131.387670654442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	-37053895	True	NA	-26	True	TTTAAA	-25	NA	37059629	37009616	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37023045_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
WTC11_00023949	chr13	-	2580	26	NNC	ENSG00000102710.21	novel	2923	26	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_25	148.508046920024	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGAGTTTCTACTT	-37053898	True	NA	-30	True	TTTAAA	-21	NA	37059632	37009620	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_37009810_37012191_37012298_37017244_37017329_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37054134_37054297_37059558
WTC11_00023950	chr13	-	3375	12	NIC	ENSG00000120685.20	novel	5182	13	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	121.338199581525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-39032505	True	NA	-23	True	CATAAA	-17	NA	39038068	39009864	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_39011488_39012082_39012234_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
WTC11_00023960	chr13	-	4355	5	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	76	junction_3	208.731136872293	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTACTTGTGTAATTGA	-42871570	True	NA	-6	True	AATAAA	-31	NA	42872812	42849698	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676_42868603_42870600_42870703_42872557
WTC11_00023961	chr13	-	2875	5	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	222.035329396022	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTACTTGTGTAATTG	-42871558	True	NA	-7	True	AATAAA	-30	NA	42872800	42849699	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42866358_42867818_42870600_42870703_42872557
WTC11_00023962	chr13	-	4875	5	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_3	217.483907450643	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTACTTGTGTAATTG	-42871570	True	NA	-7	True	AATAAA	-30	NA	42872812	42849699	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676_42865810_42866358_42867818_42870600
WTC11_00023963	chr13	-	768	3	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	123	junction_2	56.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-42871558	True	NA	-28	True	AATAAA	-20	NA	42872800	42868041	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42868465_42870600_42870703_42872557
WTC11_00023965	chr13	-	821	3	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	149.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-42871557	True	NA	-28	True	AATAAA	-20	NA	42872799	42868041	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42868462_42870600_42870760_42872557
WTC11_00023966	chr13	-	959	3	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	76	junction_1	169	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-42871556	True	NA	-30	True	AATAAA	-18	NA	42872798	42868043	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42868603_42870600_42870760_42872557
WTC11_00023982	chr13	-	2321	11	FSM	ENSG00000136143.16	ENST00000646804.1	2321	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	237.469240113325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTTAAGTTAATAAAAA	-48037521	True	NA	7	True	AATAAA	-40	NA	48037942	47942688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48037605
WTC11_00023994	chr13	-	1114	9	NIC	ENSG00000102796.12	novel	1119	9	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	38.7007751860347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGAACTCCTGCAGCAG	-51803094	True	NA	-15	True	AATAAA	-26	NA	51804157	51768000	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51768297_51769155_51769294_51771820_51771912_51773920_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
WTC11_00023995	chr13	-	993	8	NIC	ENSG00000102796.12	novel	1162	10	NA	NA	7	-7	combination_of_known_splicesites	FALSE	canonical	2	15	junction_3	42.3604551824612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTGAACTCCTGCAGCA	-51803053	True	NA	-16	True	AATAAA	-25	NA	51804116	51768001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51768297_51769155_51769294_51773929_51774035_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
WTC11_00023996	chr13	-	998	8	NIC	ENSG00000102796.12	novel	1119	9	NA	NA	8	-14	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	37.5722433371732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCACCTTGAACTCC	-51803086	True	NA	-23	True	AATAAA	-18	NA	51804149	51768008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51768297_51769155_51769294_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
WTC11_00023997	chr13	-	1476	9	NIC	ENSG00000102796.12	novel	1324	8	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	35.7840746701658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTCATGATCTTATTT	-51803094	True	NA	0	True	ATTAAA	-27	NA	51804157	51770773	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
WTC11_00023998	chr13	-	1727	7	NIC	ENSG00000102796.12	novel	1199	10	NA	NA	6	4	intron_retention	FALSE	canonical	2	15	junction_2	40.350203083614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTACATGCCTCATGATC	-51803088	True	NA	-6	True	ATTAAA	-21	NA	51804151	51770779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51771912_51773929_51774035_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
WTC11_00024000	chr13	-	930	8	NIC	ENSG00000102796.12	novel	561	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.698996260533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	-51803093	True	NA	NA	False	AATAAA	-20	NA	51804156	51772765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
WTC11_00024011	chr13	-	816	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	587	junction_2	258.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118080	True	NA	-3	True	CATAAA	-23	NA	54132851	54115782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54132612
WTC11_00024015	chr13	-	6864	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-216	3796	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	25	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGATTGATAACTTTT	-55583691	False	NA	NA	False	AGTAAA	-16	NA	55583740	55531900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_55536347_55554860_55554985_55581446
WTC11_00024016	chr13	-	4936	4	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-229	3796	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	71.1867653117878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGATTGATAACTTTT	-55583704	False	NA	NA	False	AGTAAA	-16	NA	55583753	55531900	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_55536347_55554860_55554985_55581427_55581530_55583489
WTC11_00024017	chr13	-	13395	2	Genic_Genomic	ENSG00000274090.1	novel	809	3	NA	NA	-229	-34539	multi-exon	FALSE	canonical	3	379	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATTGAGATTGAAATT	-55583704	False	NA	-61	True	AATAAA	-20	NA	55583753	55570235	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_55576967_55577089
WTC11_00024023	chr13	-	3787	22	NIC	ENSG00000083520.15	novel	3651	23	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_20	65.45487098799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTAGTTATATCAGT	-72776331	True	NA	-1	True	AATAAA	-23	NA	72781924	72759044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781288_72781357_72781604
WTC11_00024041	chr13	-	4782	32	NNC	ENSG00000102595.21	novel	833	8	NA	NA	0	-13677	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_27	49.0490209037133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTTCATAGTAATGT	-96048557	True	NA	-12	True	AATAAA	-21	NA	96053393	95815256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95816105_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
WTC11_00024050	chr13	-	5701	3	NNC	ENSG00000139800.9	novel	4497	2	NA	NA	-1040	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	11	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTCCCTTGGTCTCT	-99972732	False	NA	32	True	AATAGA	-20	NA	99972807	99962960	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_99965820_99969768_99969930_99970126
WTC11_00024063	chr13	-	5153	4	NNC	ENSG00000088448.14	novel	2495	6	NA	NA	-1303	0	intron_retention	FALSE	canonical	3	8	junction_3	398.722404130437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110901989	False	NA	-1	True	AATAAA	-16	NA	110902042	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110880113_110883697_110883794_110893027_110894394_110899924
WTC11_00024064	chr13	-	2496	7	NNC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_4	326.570266388244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897564	True	NA	-1	True	AATAAA	-16	NA	110915006	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110880113_110883697_110883794_110893027_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
WTC11_00024065	chr13	-	8035	7	NNC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_2	325.768024145335	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897564	True	NA	-1	True	AATAAA	-16	NA	110915006	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110883794_110893027_110894394_110899924_110900695_110906032_110906125_110910617_110910771_110911653_110911772_110914724
WTC11_00024066	chr13	-	3417	4	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	-1302	0	combination_of_known_junctions	FALSE	canonical	3	343	junction_3	241.363257813243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110901988	False	NA	-1	True	AATAAA	-16	NA	110902041	110878539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110880113_110883697_110883794_110893027_110893264_110900529
WTC11_00024067	chr13	-	1160	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	169.068772988982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897563	True	NA	-6	True	ATTAAA	-18	NA	110915005	110892697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110893264_110903471_110903540_110906032_110906125_110910617_110910771_110914724
WTC11_00024068	chr13	-	1187	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	154.548333863552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897594	True	NA	-6	True	ATTAAA	-18	NA	110915036	110892697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
WTC11_00024070	chr13	-	1757	14	NNC	ENSG00000126226.22	novel	1897	14	NA	NA	0	0	intron_retention	FALSE	non_canonical	1	33	junction_6	241.766893451586	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTGTTGGTTAAAAAAAA	-113200402	True	NA	-21	True	AATAAA	-19	NA	113208641	113177612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184453_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
WTC11_00024091	chr13	+	1646	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	45	25767	45	-2738	5prime_fragment	FALSE	canonical	3	123	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGTATTTTAATGCTT	19628854	True	NA	NA	False	ATTAAA	-21	NA	19633703	19647674	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_19633962_19642114_19642271_19646442
WTC11_00024092	chr13	+	978	1	FSM	ENSG00000279951.1	ENST00000623873.1	1513	1	-284	819	-284	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTAAGTAGTTGGCT	20092336	False	NA	NA	False	NA	NA	NA	20092347	20093325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20092300_20093300
WTC11_00024093	chr13	+	343	1	FSM	ENSG00000238286.1	ENST00000419313.1	864	1	-330	851	-330	-851	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCTGCCACTCACCTTC	NA	False	NA	NA	False	NA	NA	NA	20606937	20607280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20606900_20607300
WTC11_00024101	chr13	+	1634	9	FSM	ENSG00000122034.17	ENST00000470606.5	1919	9	285	0	285	0	multi-exon	FALSE	canonical	1	3	junction_1	355.246657267876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	27425669	False	NA	12	True	ATTAAA	-16	NA	27425695	27435688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27426342_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
WTC11_00024103	chr13	+	2869	2	ISM	ENSG00000186184.20	ENST00000636952.2	3159	4	28247	0	1765	0	3prime_fragment	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATGGAGTTTTTAAAAA	27650103	False	NA	-49	True	TTTAAA	-18	NA	27650151	27667353	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_27651353_27665685
WTC11_00024105	chr13	+	4827	9	NNC	ENSG00000132952.12	novel	4894	9	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	43.3928277483733	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTACCTGTTTTTGT	30615756	True	NA	NA	False	AATAAA	-23	NA	30617963	30660761	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30618057_30621072_30621222_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
WTC11_00024122	chr13	+	2300	2	FSM	ENSG00000172766.19	ENST00000469708.1	773	2	-307	-1220	-307	2	multi-exon	FALSE	canonical	3	116	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTATGTTTGTGTTTTG	41374149	False	NA	16	True	AATAAA	-20	NA	41374167	41377032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41374840_41375404
WTC11_00024128	chr13	+	1664	10	FSM	ENSG00000170919.16	ENST00000660680.1	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	32.1861867465525	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGGGCAACATGACAA	45343910	False	NA	NA	False	NA	NA	NA	45344418	45391619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45344447_45369958_45370183_45377060_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383170_45389734_45389821_45390757_45390903_45391031
WTC11_00024130	chr13	+	569	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	-20	128	2	0	multi-exon	FALSE	canonical	2	5	junction_3	13.8631706330118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTGTAGAGGAGACC	49247146	True	NA	NA	False	NA	NA	NA	49247926	49267657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
WTC11_00024131	chr13	+	1055	4	FSM	ENSG00000136147.18	ENST00000496623.5	1173	4	-17	135	0	-135	multi-exon	FALSE	canonical	3	41	junction_2	5.43650214343336	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTCAGTGGCAGAGCT	49495399	True	NA	NA	False	NA	NA	NA	49495952	49518699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49496096_49506634_49506757_49513058_49513167_49518017
WTC11_00024137	chr13	+	1428	11	FSM	ENSG00000136104.21	ENST00000644297.1	1428	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	171.035785729186	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAGTGTATGACTGCTT	50909152	False	NA	6	True	AATAAA	-16	NA	50909879	50956761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929460_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
WTC11_00024145	chr13	+	1250	4	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_3	9.7410927974683	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTTTTTTTTTTGT	54268522	False	NA	18	True	ATTAAA	-15	NA	54269328	54353965	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_54269408_54335030_54335144_54341965_54342163_54353104
WTC11_00024149	chr13	+	8310	3	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	247.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTTTCACCATAGCTT	NA	False	NA	NA	False	NA	NA	NA	55570238	55584083	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_55576962_55577085_55578435_55583845
WTC11_00024150	chr13	+	11940	5	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	322.026687558656	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	NA	False	NA	22	True	AATAAA	-22	NA	55570238	55672522	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_55576962_55577085_55581308_55658037_55658323_55670879_55670978_55671910
WTC11_00024151	chr13	+	11842	6	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	299.013444513788	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	NA	False	NA	22	True	AATAAA	-22	NA	55570238	55672522	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_55576962_55577085_55581308_55658037_55658106_55658203_55658323_55670879_55670978_55671910
WTC11_00024156	chr13	+	2629	2	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGGCCATGCTGTA	NA	False	NA	NA	False	NA	NA	NA	66141372	66229052	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66143876_66228926
WTC11_00024165	chr13	+	2734	5	FSM	ENSG00000227354.7	ENST00000664699.1	2721	5	-13	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.08872343937891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGTGTCTGAAGGAT	79406012	True	NA	NA	False	AATGAA	-32	NA	79406292	79425753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986_79422196_79423551
WTC11_00024185	chr13	+	5904	6	ISM	ENSG00000213995.12	ENST00000680254.1	2515	10	46	0	0	0	intron_retention	FALSE	canonical	3	127	junction_3	12.0099958368019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613642	True	NA	10	True	ATTAAA	-23	NA	110615590	110639996	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544
WTC11_00024186	chr13	+	5630	10	NNC	ENSG00000102606.19	novel	5032	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	67.3877667764047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	111275630	True	NA	21	True	ATTAAA	-21	NA	111275650	111305731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111284512_111285303_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
WTC11_00024193	chr13	+	1509	8	FSM	ENSG00000126218.12	ENST00000375551.7	1509	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.85293935756087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCTGGTTTGTCTCTCG	113122685	True	NA	15	True	ATTAAA	-15	NA	113122813	113149527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147487_113148915
WTC11_00024195	chr13	+	2474	11	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-98	-3	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_4	197.712822042477	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTGTTTCTCTAATT	113584595	False	NA	9	True	AATAAA	-21	NA	113584622	113641470	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637885_113640119
WTC11_00024196	chr13	+	2549	11	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_4	137.925487129827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578840	True	NA	12	True	AATAAA	-24	NA	113584720	113641473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
WTC11_00024197	chr13	+	2204	20	FSM	ENSG00000130177.16	ENST00000650489.1	2204	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	120.336462744789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGGTAAACCATCTG	114230623	True	NA	-7	True	NA	NA	NA	114234933	114272657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114269562_114269621_114272183_114272482_114272563
WTC11_00024198	chr13	+	2153	17	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	2	0	intron_retention	FALSE	canonical	1	8	junction_16	91.9819742870852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230625	True	NA	11	True	AATAAA	-15	NA	114234935	114272675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114272183
WTC11_00024199	chr13	+	1977	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	162.67699762276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114281839	False	NA	-1	True	AATAAA	-16	NA	114281952	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114282128_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
WTC11_00024200	chr13	+	1882	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	186.499702114746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114281660	True	NA	-1	True	AATAAA	-16	NA	114281993	114305808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114301730_114302026_114304788
WTC11_00024204	chr13	-	262	1	FSM	ENSG00000242756.2	ENST00000436571.1	331	1	70	-1	70	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCAGTGGTGGGATCTC	NA	False	NA	NA	False	CATAAA	-29	NA	18838028	18837766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_18837800_18838000
WTC11_00024205	chr13	-	5751	2	ISM	ENSG00000121390.19	ENST00000338910.9	2435	9	73793	-1399	21164	1399	3prime_fragment	FALSE	canonical	3	589	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAACAGAGTTCTACACA	-19709142	False	NA	NA	False	NA	NA	NA	19709152	19701100	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_19703361_19705661
WTC11_00024206	chr13	-	3495	9	NNC	ENSG00000121390.19	novel	2435	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	11	junction_2	156.776861733484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-19776107	True	NA	NA	False	AATAAA	-22	NA	19782931	19702499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_19703361_19705661_19706906_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
WTC11_00024207	chr13	-	3187	9	NNC	ENSG00000132950.19	novel	3283	8	NA	NA	0	10573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.8505446780403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAATGTGGTGGTGT	-19862079	True	NA	NA	False	NA	NA	NA	19863524	19812908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_19812941_19823484_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
WTC11_00024208	chr13	-	2825	7	NNC	ENSG00000132950.19	novel	3283	8	NA	NA	0	10573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.464844547319	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAATGTGGTGGTGT	-19862167	True	NA	NA	False	NA	NA	NA	19863612	19812908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_19812940_19823481_19825236_19835476_19835690_19851354_19851449_19851688_19852191_19862398_19862467_19863449
WTC11_00024209	chr13	-	1634	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	-12	0	0	multi-exon	FALSE	canonical	3	50	junction_1	23.2163735324878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	-19862079	True	NA	-1	True	AATAAA	-29	NA	19863524	19837452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
WTC11_00024210	chr13	-	7782	21	NIC	ENSG00000132953.18	novel	9857	23	NA	NA	21	-1805	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	36.464331887476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACTAAGACTTTTCAGT	-20901948	False	NA	-7	True	ATTAAA	-10	NA	20902725	20779133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_20783920_20786964_20787058_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
WTC11_00024247	chr13	-	3731	5	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	230.44888261825	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTACTTGTGTAATTGAG	-42871570	True	NA	-5	True	AATAAA	-32	NA	42872812	42849697	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42866358_42868603_42870600_42870760_42872557
WTC11_00024248	chr13	-	712	3	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-42872736	False	NA	-28	True	AATAAA	-20	NA	42872747	42868041	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42868462_42870600_42870703_42872557
WTC11_00024253	chr13	-	948	5	FSM	ENSG00000133112.17	ENST00000379055.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	3132	junction_4	533.511949256996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGACTGATGTCATCT	-45181057	True	NA	-40	True	NA	NA	NA	45341158	45337301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711
WTC11_00024255	chr13	-	3938	9	NNC	ENSG00000174032.17	novel	3663	10	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	8.78919791562347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATTTCTGGTTATT	-45417675	True	NA	NA	False	AATAAA	-21	NA	45418431	45393320	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_45396319_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
WTC11_00024256	chr13	-	7960	19	NIC	ENSG00000123200.17	novel	8024	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_18	51.4287533065567	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046180	True	NA	-8	True	AATAAA	-18	NA	46052685	45954464	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
WTC11_00024262	chr13	-	3982	13	NNC	ENSG00000136144.12	novel	4008	13	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	43.1376189267172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACATAGAGTTGTTTTT	-49583356	True	NA	NA	False	AATAAA	-18	NA	49585532	49531948	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567324_49580504_49580585_49585443
WTC11_00024263	chr13	-	3916	12	NIC	ENSG00000136144.12	novel	4008	13	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	2	19	junction_11	44.9876015977809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACATAGAGTTGTTTTT	-49583373	True	NA	NA	False	AATAAA	-18	NA	49585549	49531948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49585443
WTC11_00024275	chr13	-	2358	15	NIC	ENSG00000136098.17	novel	2414	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	57.7685830159739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156412	True	NA	-12	True	ATTAAA	-16	NA	52159532	52132646	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159197
WTC11_00024283	chr13	-	2489	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	34	0	intron_retention	FALSE	canonical	3	1104	junction_1	1398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118014	True	NA	-3	True	CATAAA	-23	NA	54132785	54115782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54130873
WTC11_00024284	chr13	-	1060	5	FSM	ENSG00000234787.8	ENST00000423442.6	1060	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	339.928668988069	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118095	True	NA	-3	True	CATAAA	-23	NA	54132866	54115782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54116210_54120939_54121045_54125148_54125273_54127279_54127430_54132612
WTC11_00024288	chr13	-	1528	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-201	-18098	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	76	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGTAATGTGCTCCA	-55583676	False	NA	-9	True	AATAAA	-25	NA	55583725	55553794	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_55554985_55581427_55581530_55583489
WTC11_00024289	chr13	-	8527	3	Genic_Genomic	ENSG00000274090.1	novel	809	3	NA	NA	-228	-34542	multi-exon	FALSE	non_canonical	0	0	junction_2	189.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTACATTGAGATTGAA	-55583703	False	NA	-64	True	AATAAA	-17	NA	55583752	55570238	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_55576967_55577089_55578623_55583486
WTC11_00024290	chr13	-	7167	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-201	-38779	at_least_one_novel_splicesite	FALSE	canonical	3	228	junction_2	75.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGGAATTTGTAATACAA	-55583676	False	NA	-40	True	AATAAA	-7	NA	55583725	55574475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_55576967_55577089_55581530_55583489
WTC11_00024295	chr13	-	430	3	FSM	ENSG00000188243.14	ENST00000460675.5	463	3	33	0	33	0	multi-exon	FALSE	canonical	1	13	junction_2	1137.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75549308	True	NA	-21	True	AATAAA	-18	NA	75549395	75526435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530113_75530267_75549322
WTC11_00024302	chr13	-	3985	21	NNC	ENSG00000139746.16	novel	5230	22	NA	NA	81	-45	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_13	38.4050777892716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAGAAAAGAGAAAA	-79401211	False	NA	NA	False	AATAAA	-26	NA	79406140	79319998	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365734_79366054_79366226_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
WTC11_00024304	chr13	-	2731	2	FSM	ENSG00000136158.12	ENST00000377102.5	2708	2	1	-24	1	24	multi-exon	FALSE	canonical	1	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTCTTTCAAGTGTAA	-80339637	False	NA	2	True	ATTAAA	-25	NA	80339658	80335951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_80337757_80338732
WTC11_00024305	chr13	-	1772	12	NNC	ENSG00000088451.11	novel	1797	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	47.0401621968306	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593294	True	NA	NA	False	AATAAA	-17	NA	94596131	94574053	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590856_94590944_94592240_94592310_94593840_94593908_94596050
WTC11_00024306	chr13	-	1952	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	45.4792660051109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593394	True	NA	NA	False	AATAAA	-17	NA	94596231	94574053	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
WTC11_00024307	chr13	-	5102	27	NNC	ENSG00000125257.16	novel	3480	23	NA	NA	0	11349	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.4360196038088	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTCTGCCAGTAAT	-95301009	True	NA	1	True	AATAAA	-18	NA	95301451	95060380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95061980_95062703_95062860_95071661_95071854_95073203_95073305_95074213_95074325_95075431_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
WTC11_00024308	chr13	-	5261	9	ISM	ENSG00000134874.18	ENST00000347108.7	7068	21	39963	3773	-15167	-6	3prime_fragment	FALSE	canonical	3	70	junction_8	11.3026545554573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTTTTCTTCAGAAA	NA	False	NA	-24	True	NA	NA	NA	95603300	95581975	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364
WTC11_00024309	chr13	-	2334	7	NNC	ENSG00000102595.21	novel	512	3	NA	NA	-114	-13313	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.7182536362936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGGCTATGATGGAGG	NA	False	NA	NA	False	GATAAA	-3	NA	95860009	95814892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95816105_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590
WTC11_00024312	chr13	-	2172	4	FSM	ENSG00000102572.15	ENST00000418038.5	2172	4	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	68.4705938503692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTAGCTA	-98463730	False	55	NA	False	NA	NA	NA	98463785	98455420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98457305_98460371_98460441_98461773_98461898_98463690
WTC11_00024315	chr13	-	3618	19	NIC	ENSG00000125247.16	novel	3911	19	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	45.3384052173687	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	-100674960	False	NA	-4	True	AGTAAA	-26	NA	100675000	100603926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674939
WTC11_00024316	chr13	-	4177	3	FSM	ENSG00000174405.15	ENST00000611712.4	4180	3	0	3	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-108214953	True	NA	NA	False	AATAAA	-22	NA	108215535	108207441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_108211297_108214537_108214808_108215483
WTC11_00024327	chr13	-	2211	15	NNC	ENSG00000126226.22	novel	1668	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_14	266.496745394991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-113200410	True	NA	-20	True	AATAAA	-20	NA	113208649	113177611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208023
WTC11_00024330	chr13	-	3369	7	NNC	ENSG00000150401.15	novel	3032	7	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_6	32.2024843762092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113490846	False	NA	-1	True	ATTAAA	-16	NA	113490886	113455818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484219_113490666
WTC11_00024336	chr14	+	1015	1	FSM	ENSG00000277156.1	ENST00000616611.1	1050	1	121	-86	121	86	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCCTCCCCCCTCAGG	NA	False	NA	NA	False	NA	NA	NA	19267235	19268250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_19267200_19268200
WTC11_00024337	chr14	+	458	1	FSM	ENSG00000257846.2	ENST00000550646.2	1175	1	348	369	348	-369	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACACCCCCTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	19669176	19669634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_19669200_19669600
WTC11_00024338	chr14	+	2239	1	FSM	ENSG00000257884.2	ENST00000547785.2	2268	1	-7	36	-7	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCTGTATTACTGCCG	NA	False	NA	NA	False	NA	NA	NA	19677829	19680068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_19677800_19680100
WTC11_00024339	chr14	+	1847	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	-21	1	-1	0	multi-exon	FALSE	canonical	3	280	junction_1	31.7851118187955	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	20336343	True	NA	13	True	AATAAA	-15	NA	20343613	20357903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
WTC11_00024340	chr14	+	2003	15	FSM	ENSG00000129484.14	ENST00000527915.5	1980	15	-23	0	-1	0	multi-exon	FALSE	canonical	2	7	junction_2	90.1698227722308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	20336343	True	NA	13	True	AATAAA	-15	NA	20343613	20357903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395
WTC11_00024341	chr14	+	1887	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	-1	0	-1	0	multi-exon	FALSE	canonical	2	7	junction_2	87.3574012637484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336343	True	NA	14	True	AATAAA	-16	NA	20343613	20357904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
WTC11_00024347	chr14	+	909	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	-10	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	983.469750424486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	20392799	True	NA	-32	True	NA	NA	NA	20455190	20457342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
WTC11_00024348	chr14	+	1467	5	FSM	ENSG00000100823.12	ENST00000555414.5	1437	5	-64	34	-64	0	multi-exon	FALSE	canonical	3	468	junction_1	819.552126164041	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	NA	False	NA	-14	True	TTTAAA	-43	NA	20455126	20457738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455339_20455577_20455704_20455913_20456102_20456667_20456861_20456990
WTC11_00024353	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_2	215.388021951083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	20392834	True	NA	-18	True	TTTAAA	-39	NA	20455225	20457734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
WTC11_00024354	chr14	+	1817	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	-14	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_1	255	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	20392834	True	NA	-14	True	TTTAAA	-43	NA	20455225	20457738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20456102_20456667_20456861_20456990
WTC11_00024355	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_1	411.084845257034	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
WTC11_00024359	chr14	+	1490	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	240	junction_3	31.6417445789577	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	20465402	True	NA	51	True	AATAAA	-17	NA	20469392	20477089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
WTC11_00024360	chr14	+	2573	2	FSM	ENSG00000198805.12	ENST00000556754.1	2573	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCATTTTTTTGTGTAA	20473351	False	NA	49	True	AATAAA	-15	NA	20473383	20477087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20475253_20476383
WTC11_00024361	chr14	+	1829	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	-5	237	-5	-237	multi-exon	FALSE	canonical	3	11	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAATTAGCCTTGTGAC	20684194	True	NA	NA	False	NA	NA	NA	20684554	20700979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20684759_20699354
WTC11_00024367	chr14	+	2908	10	FSM	ENSG00000165792.18	ENST00000555640.6	2887	10	-21	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	193.418244444392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTTTAATAATAAATAA	20979672	True	NA	-24	True	NA	NA	NA	20989972	20996995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20994064_20994542_20994614_20994793_20995234_20995900_20996293_20996526
WTC11_00024368	chr14	+	1593	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	-7	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	96.4515926370437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	20979672	True	NA	-10	True	NA	NA	NA	20989972	20997009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
WTC11_00024369	chr14	+	1865	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	-235	-25	-214	0	multi-exon	FALSE	canonical	2	135	junction_3	168.139244543193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	NA	False	NA	16	True	AATAAA	-24	NA	20989758	20997035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
WTC11_00024371	chr14	+	1546	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	-7	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	103.749356595995	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	20979672	True	NA	16	True	AATAAA	-24	NA	20989972	20997035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
WTC11_00024373	chr14	+	1533	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	-4	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	165.864812708044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	20979698	True	NA	-3	True	AATAAA	-5	NA	20989998	20997016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
WTC11_00024380	chr14	+	1796	4	FSM	ENSG00000165801.10	ENST00000555038.5	1796	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	12.5698050899765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGCTTGGGGACTGGGG	21067521	True	NA	NA	False	NA	NA	NA	21070272	21075553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331
WTC11_00024381	chr14	+	5750	23	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-673	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_20	38.1321105007272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	21069582	False	NA	18	True	ATTAAA	-15	NA	21069599	21089545	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
WTC11_00024382	chr14	+	5893	24	FSM	ENSG00000165801.10	ENST00000298694.9	5893	24	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	56.5058171554111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCAGAGTGGCTCCTC	21067552	True	NA	19	True	AATAAA	-25	NA	21070303	21090248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
WTC11_00024385	chr14	+	4580	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	-66	0	-53	0	multi-exon	FALSE	canonical	3	422	junction_5	35.134562755213	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	21477069	False	NA	17	True	AATAAA	-22	NA	21477128	21499170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
WTC11_00024386	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_4	29.209967857261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	21477122	False	NA	NA	False	NA	NA	NA	21477181	21496227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
WTC11_00024390	chr14	+	878	3	FSM	ENSG00000100439.11	ENST00000539344.1	986	3	-69	177	-59	3	multi-exon	FALSE	canonical	3	176	junction_1	34	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCTGTAGTATCT	22592921	True	NA	NA	False	NA	NA	NA	22598230	22604079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22598330_22601666_22601756_22603389
WTC11_00024391	chr14	+	2516	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-69	604	-59	1	multi-exon	FALSE	canonical	3	176	junction_1	27.6792140222386	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGGGGATGATGTTTAA	22592921	True	NA	18	True	AATAAA	-18	NA	22598230	22612359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
WTC11_00024392	chr14	+	371	3	FSM	ENSG00000100439.11	ENST00000542041.1	465	3	94	0	88	0	multi-exon	FALSE	canonical	2	4	junction_1	120	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCCGGAGGGGGCTGAG	22593082	False	NA	NA	False	NA	NA	NA	22598391	22603620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22598443_22601666_22601756_22603389
WTC11_00024393	chr14	+	3569	8	FSM	ENSG00000155463.14	ENST00000481218.1	1596	8	-662	-1311	-55	30	multi-exon	FALSE	canonical	3	835	junction_2	27.8509150547653	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGGTTTATCAGCCT	NA	False	NA	NA	False	NA	NA	NA	22766619	22773072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22767410_22767957_22768172_22769790_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
WTC11_00024394	chr14	+	906	6	FSM	ENSG00000155463.14	ENST00000431881.6	889	6	-17	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	338.931025431429	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGACAGGTGGCCT	22756136	True	NA	NA	False	NA	NA	NA	22766674	22770520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22766915_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460
WTC11_00024395	chr14	+	4162	10	FSM	ENSG00000155463.14	ENST00000612549.6	2806	10	-96	-1260	70	1260	multi-exon	FALSE	canonical	3	812	junction_1	34.0993465054503	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCCAGCTGTTTCAG	NA	False	NA	NA	False	AATAAA	-26	NA	22766591	22774302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
WTC11_00024396	chr14	+	1121	5	FSM	ENSG00000172590.18	ENST00000397496.7	1111	5	-10	0	-2	0	multi-exon	FALSE	canonical	3	493	junction_1	560.87543180282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTAGCCAAGGTCCCTT	22807204	True	NA	17	True	AATAAA	-18	NA	22829876	22835037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22833417_22833483_22834171
WTC11_00024397	chr14	+	372	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	-10	0	-2	0	multi-exon	FALSE	canonical	2	56	junction_1	760.65950916878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807204	True	NA	17	True	AATAAA	-25	NA	22829876	22834346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
WTC11_00024398	chr14	+	913	4	FSM	ENSG00000172590.18	ENST00000555345.5	895	4	-18	0	-2	0	multi-exon	FALSE	canonical	3	1659	junction_3	130.624993354598	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTTGTAATCCCAGCTA	22807204	True	NA	NA	False	ACTAAA	-31	NA	22829876	22834717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22833417_22833483_22834171
WTC11_00024399	chr14	+	1124	5	FSM	ENSG00000172590.18	ENST00000355151.9	1118	5	-6	0	-2	0	multi-exon	TRUE	canonical	3	684	junction_1	480.159543797684	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTAGCCAAGGTCCCTT	22807204	True	NA	17	True	AATAAA	-18	NA	22829876	22835037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22833417_22833483_22834171
WTC11_00024401	chr14	+	589	5	FSM	ENSG00000172590.18	ENST00000553711.5	586	5	-3	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	878.380612263272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGTCTCTGGATTTCT	22807230	True	NA	16	True	AATAAA	-24	NA	22829902	22834345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22830963_22831038_22833417_22833483_22834171
WTC11_00024402	chr14	+	416	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	-18	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	674.943886556505	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807230	True	NA	18	True	AATAAA	-26	NA	22829902	22834347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
WTC11_00024403	chr14	+	343	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	-10	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	775.654992033615	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807230	True	NA	18	True	AATAAA	-26	NA	22829902	22834347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
WTC11_00024404	chr14	+	1055	5	FSM	ENSG00000172590.18	ENST00000311892.10	1042	5	-13	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	803.978972050886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGCACAGTTTAGGCC	22807230	True	NA	-43	True	NA	NA	NA	22829902	22834977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22830963_22831038_22834171
WTC11_00024405	chr14	+	532	2	FSM	ENSG00000157227.14	ENST00000547074.1	560	2	-17	45	-17	-45	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTAGACCCTGGCA	22828783	True	NA	NA	False	NA	NA	NA	22836542	22841639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22836926_22841490
WTC11_00024406	chr14	+	3785	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	-84	0	-59	0	multi-exon	TRUE	canonical	3	36	junction_4	5.61303597347337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22836490	False	NA	19	True	AATAAA	-13	NA	22836500	22847758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
WTC11_00024407	chr14	+	6817	7	FSM	ENSG00000197324.9	ENST00000359591.9	6892	7	21	54	21	-54	multi-exon	TRUE	canonical	3	214	junction_4	22.1359436211787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACACACATGGACACGT	22869454	True	NA	89	True	NA	NA	NA	22871760	22881659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939
WTC11_00024408	chr14	+	1780	8	FSM	ENSG00000197324.9	ENST00000546834.5	1780	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	87.8073029364847	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGGGGAGAGGGCT	22872253	False	NA	NA	False	NA	NA	NA	22872303	22879310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939_22877054_22879198
WTC11_00024409	chr14	+	1862	5	FSM	ENSG00000139890.10	ENST00000267396.9	1858	5	0	-4	0	4	multi-exon	FALSE	canonical	3	13	junction_4	3.20156211871642	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTTTGACTCTGTTCT	22883080	True	NA	13	True	AATAAA	-21	NA	22883221	22887682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22883391_22884673_22885016_22885265_22885340_22886023_22886232_22886613
WTC11_00024410	chr14	+	2914	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGACTCCATGGATTTGA	23084139	True	NA	10	True	AATAAA	-15	NA	23095504	23100456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23095620_23097657
WTC11_00024411	chr14	+	3537	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	-11	0	-6	0	multi-exon	FALSE	canonical	2	9	junction_1	9.41629792788369	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	23305236	True	NA	11	True	AATAAA	-25	NA	23306821	23311751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
WTC11_00024412	chr14	+	514	2	FSM	ENSG00000129473.11	ENST00000554635.1	545	2	31	0	31	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCAGCCCAACAACGCT	23306954	False	NA	NA	False	NA	NA	NA	23306988	23307982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23307280_23307759
WTC11_00024413	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	219.652503337026	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	23306276	True	NA	8	True	AATAAA	-21	NA	23321456	23326163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
WTC11_00024414	chr14	+	2768	6	FSM	ENSG00000100836.11	ENST00000397276.6	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	219.399179579141	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	23306276	True	NA	8	True	AATAAA	-21	NA	23321456	23326163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
WTC11_00024415	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2777	junction_5	165.426720937096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	23306362	False	NA	9	True	AAAAAG	-7	NA	23321542	23325298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
WTC11_00024420	chr14	+	1500	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	-214	918	-200	-131	multi-exon	FALSE	canonical	3	452	junction_1	149.465302138021	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCCCTGTGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	23469488	23477905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
WTC11_00024421	chr14	+	753	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	50	0	-50	multi-exon	FALSE	canonical	3	452	junction_1	189.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTCCAGCACTTCAGG	23462765	True	NA	NA	False	AAGAAA	-34	NA	23469688	23471559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905
WTC11_00024422	chr14	+	723	6	FSM	ENSG00000129460.16	ENST00000553336.5	712	6	-11	0	-1	0	multi-exon	FALSE	canonical	3	452	junction_1	172.009767164542	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAGAAGATGACCAGT	23462764	True	NA	NA	False	NA	NA	NA	23469687	23476054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475643_23475725_23475779_23476028
WTC11_00024423	chr14	+	1217	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	-109	0	-95	0	multi-exon	FALSE	canonical	3	452	junction_1	142.304919099798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	NA	False	NA	10	True	AATAAA	-19	NA	23469593	23478173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
WTC11_00024430	chr14	+	2069	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	14	-1512	-5	150	multi-exon	FALSE	canonical	3	60	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGGGAGACAGAAGCAG	23555132	True	NA	NA	False	NA	NA	NA	23556001	23560421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23556344_23558694
WTC11_00024431	chr14	+	2631	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	-5	-847	-5	150	multi-exon	FALSE	canonical	3	32	junction_1	33.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGGGAGACAGAAGCAG	23555132	True	NA	NA	False	NA	NA	NA	23556001	23560421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23556344_23556742_23557305_23558694
WTC11_00024432	chr14	+	1618	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	-23	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	23555929	True	NA	-23	True	NA	NA	NA	23556270	23559543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23557040_23558694
WTC11_00024433	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	23555929	True	NA	NA	False	NA	NA	NA	23556270	23560271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23557305_23558694
WTC11_00024434	chr14	+	1281	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	-21	4	15	1	multi-exon	FALSE	canonical	3	105	junction_5	37.2881772585535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGACCTGTTCATTTC	23951398	True	NA	NA	False	AATAAA	-27	NA	23953748	23969275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
WTC11_00024435	chr14	+	1157	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	-19	5	0	0	multi-exon	FALSE	canonical	3	15	junction_2	61.4455495178907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951419	True	NA	NA	False	AATAAA	-26	NA	23953769	23969274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
WTC11_00024436	chr14	+	992	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	-265	0	0	multi-exon	FALSE	canonical	3	53	junction_3	58.6190028915539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951428	True	NA	NA	False	AATAAA	-26	NA	23953778	23969274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
WTC11_00024437	chr14	+	1300	6	FSM	ENSG00000187630.18	ENST00000534993.5	1450	6	148	2	-85	1	multi-exon	FALSE	canonical	1	1	junction_3	75.8039576803217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGACCTGTTCATTTC	23969993	False	NA	NA	False	AATAAA	-27	NA	23970021	24006404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23970333_23990181_23990360_23995031_23995134_24001383_24001518_24004336_24004393_24005885
WTC11_00024438	chr14	+	1139	6	NIC	ENSG00000187630.18	novel	1258	8	NA	NA	-12	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	73.369203348544	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATCCAATTGACCT	23988572	True	NA	NA	False	AATAAA	-18	NA	23988916	24006395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_23989076_23990181_23990360_23995031_23995134_24001383_24001518_24004336_24004393_24005885
WTC11_00024440	chr14	+	564	3	FSM	ENSG00000186648.15	ENST00000561354.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGATAGCAGGGCCTCC	24060729	False	NA	NA	False	AATACA	-6	NA	24060740	24061930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24060757_24060926_24061041_24061496
WTC11_00024441	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	27.8612634315101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	24094158	24100562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
WTC11_00024442	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	27.8159737392335	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
WTC11_00024444	chr14	+	1960	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	82.996987897152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
WTC11_00024447	chr14	+	515	3	FSM	ENSG00000100897.18	ENST00000561056.5	577	3	62	0	62	0	multi-exon	FALSE	canonical	3	48	junction_2	27	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCGTCTTGGGGATCGA	NA	False	NA	NA	False	NA	NA	NA	24114688	24117011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115542_24115727_24116916
WTC11_00024449	chr14	+	581	3	FSM	ENSG00000100897.18	ENST00000558215.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	137	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAGAGGAAGAGAATGAC	24110753	True	NA	NA	False	NA	NA	NA	24114776	24116981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115381_24115750_24116916
WTC11_00024450	chr14	+	568	4	FSM	ENSG00000100897.18	ENST00000557809.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	176.850847389042	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGCGGGCCGCCCAGAA	24110753	True	NA	NA	False	NA	NA	NA	24114776	24117345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115514_24115727_24116916_24117045_24117265
WTC11_00024451	chr14	+	955	5	FSM	ENSG00000100897.18	ENST00000557810.5	947	5	-8	0	-8	0	multi-exon	TRUE	canonical	3	78	junction_2	118.790782470695	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGCCGCCCAGAAGCAC	NA	False	NA	NA	False	GGGGCT	-3	NA	24114768	24117349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265
WTC11_00024452	chr14	+	748	7	FSM	ENSG00000100897.18	ENST00000561375.5	748	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	155.564563231262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGCATCAAGGCCCGCG	24110753	True	NA	NA	False	NA	NA	NA	24114776	24118436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387
WTC11_00024453	chr14	+	4312	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	-8	0	-8	0	multi-exon	FALSE	canonical	3	207	junction_1	61.9410516342031	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	NA	False	NA	12	True	AATAAA	-24	NA	24114768	24125242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
WTC11_00024467	chr14	+	3783	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	-1213	0	0	multi-exon	FALSE	canonical	3	48	junction_2	102.973941621467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	24113051	True	NA	12	True	AATAAA	-24	NA	24115274	24125242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
WTC11_00024479	chr14	+	434	1	FSM	ENSG00000139914.7	ENST00000559294.1	800	1	362	4	362	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGGCTCCTCTCATC	NA	False	NA	NA	False	AATAAA	-13	NA	24132411	24132845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24132400_24132800
WTC11_00024480	chr14	+	965	11	FSM	ENSG00000092010.15	ENST00000206451.11	965	11	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	646.180818347311	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCCCAAGTCTCTTTA	24129637	True	NA	19	True	AATAAA	-19	NA	24136193	24138962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138561_24138735
WTC11_00024481	chr14	+	1142	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	-6	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	38.146242311257	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	24129637	True	NA	21	True	AATAAA	-21	NA	24136193	24138964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
WTC11_00024482	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	243.141543138971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	24129670	True	NA	24	True	AATAAA	-24	NA	24136226	24138967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
WTC11_00024483	chr14	+	576	6	FSM	ENSG00000092098.17	ENST00000560071.5	576	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	43.510918170041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCATCCCGTGCTCATC	24146666	True	NA	NA	False	NA	NA	NA	24146876	24149511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24146908_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405
WTC11_00024485	chr14	+	6034	30	NIC	ENSG00000259529.2	novel	5574	29	NA	NA	-221	112	combination_of_known_splicesites	FALSE	canonical	3	41	junction_27	33.9461348513146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTATCTGATTTTCTGG	24147116	False	NA	9	True	AATAAA	-18	NA	24147326	24166564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165056_24165184_24165846_24165963_24166121
WTC11_00024487	chr14	+	5574	29	FSM	ENSG00000259529.2	ENST00000558468.2	5574	29	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_27	36.0859235374546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGGGCCTTTCCCTC	24143486	True	NA	NA	False	NA	NA	NA	24147547	24166452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
WTC11_00024489	chr14	+	2834	20	FSM	ENSG00000092098.17	ENST00000560787.5	2834	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	31.8216114998715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGCTTCTTGGTGGTC	24148043	False	NA	14	True	AATAAA	-14	NA	24148081	24160654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151298_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
WTC11_00024492	chr14	+	579	5	FSM	ENSG00000092098.17	ENST00000559719.1	579	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.0991283616501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	24157481	False	NA	15	True	AATAAA	-15	NA	24157519	24160655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24157639_24158141_24158200_24159863_24159961_24160238_24160408_24160519
WTC11_00024495	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	15.9921855917195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	24160769	True	NA	10	True	AATAAA	-19	NA	24161264	24166565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
WTC11_00024500	chr14	+	625	4	FSM	ENSG00000100918.14	ENST00000557806.5	635	4	10	0	10	0	multi-exon	FALSE	canonical	3	9	junction_1	78.8712030253544	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTGTGATCCGCGTCTAT	24169407	True	NA	NA	False	NA	NA	NA	24172024	24172996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172366_24172491_24172609_24172712_24172782_24172898
WTC11_00024501	chr14	+	2271	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	134	0	-28	0	multi-exon	FALSE	canonical	3	113	junction_1	25.2619517255922	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	NA	False	NA	14	True	AAAACA	-20	NA	24171986	24180257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
WTC11_00024502	chr14	+	2326	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	-51	1	14	0	multi-exon	FALSE	canonical	3	125	junction_12	22.8549505672644	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGATGTCATGACTCAT	24169411	True	NA	10	True	AAAACA	-16	NA	24172028	24180253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
WTC11_00024503	chr14	+	3103	17	FSM	ENSG00000100918.14	ENST00000619469.4	2720	17	-106	-277	14	274	multi-exon	FALSE	canonical	3	125	junction_10	22.5713279128633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGGAACGTCAGGAGCA	24169411	True	NA	NA	False	NA	NA	NA	24172028	24180531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
WTC11_00024511	chr14	+	1974	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	47	junction_1	81.6874501142791	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232407	False	NA	13	True	AATAAA	-23	NA	24232419	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00024512	chr14	+	1913	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	-20	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	76.5738568674424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232409	False	NA	13	True	AATAAA	-23	NA	24232421	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00024516	chr14	+	1869	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	-5	0	-2	0	multi-exon	FALSE	canonical	3	269	junction_2	24.2950612265127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230713	True	NA	13	True	AATAAA	-23	NA	24232895	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00024517	chr14	+	1601	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	-6	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	66.159925955741	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230740	True	NA	13	True	AATAAA	-23	NA	24232922	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00024518	chr14	+	2025	8	FSM	ENSG00000100938.19	ENST00000557854.5	2025	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	24.74853118709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230740	True	NA	13	True	AATAAA	-23	NA	24232922	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245
WTC11_00024519	chr14	+	1484	9	FSM	ENSG00000100938.19	ENST00000456667.7	1484	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	113.471362025843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAGAGATGCTGGGG	24230765	True	NA	5	True	AATAAA	-15	NA	24232947	24239234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00024521	chr14	+	2680	7	ISM	ENSG00000100938.19	ENST00000557854.5	2025	8	28	0	3	0	intron_retention	FALSE	canonical	3	269	junction_2	24.6807392289795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230768	False	NA	13	True	AATAAA	-23	NA	24232950	24239242	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519
WTC11_00024523	chr14	+	334	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	9	12	9	-12	multi-exon	FALSE	canonical	3	87	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	24270491	True	NA	79	True	AATAAA	-9	NA	24271209	24298846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24271311_24298613
WTC11_00024524	chr14	+	6039	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	6	0	6	0	multi-exon	FALSE	canonical	3	44	junction_1	9.06492357972051	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	24296955	True	NA	4	True	AATAAA	-15	NA	24299855	24309124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
WTC11_00024525	chr14	+	14454	12	Fusion	ENSG00000196943.14_ENSG00000213906.10_ENSG00000213903.9	novel	6045	10	NA	NA	7	1	intron_retention	FALSE	canonical	3	9	junction_10	18.7898337203837	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCCGGTATTTTTGAG	24296956	True	NA	13	True	AATAAA	-24	NA	24299856	24318037	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937_24310256_24310654_24313956_24314053
WTC11_00024528	chr14	+	4758	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	4	0	-4	multi-exon	FALSE	canonical	3	71	junction_9	13.2748718344933	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAATTCAAACTCAATA	24367311	True	NA	-1	True	AATAAA	-15	NA	24368183	24379597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
WTC11_00024529	chr14	+	2967	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	90	0	40	0	multi-exon	FALSE	canonical	2	6	junction_9	29.7860684975915	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	24367237	True	NA	28	True	AATAAA	-18	NA	24368109	24378056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
WTC11_00024530	chr14	+	5360	9	FSM	ENSG00000100968.14	ENST00000553708.5	5367	9	0	7	0	-4	multi-exon	FALSE	canonical	3	77	junction_5	11.8367806011601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAATTCAAACTCAATA	24368327	False	NA	-1	True	AATAAA	-15	NA	24368340	24379597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
WTC11_00024531	chr14	+	856	5	FSM	ENSG00000100968.14	ENST00000557767.5	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	43.41370751272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGTGAACTGTCATCAC	24374109	False	NA	NA	False	NA	NA	NA	24374122	24377705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
WTC11_00024534	chr14	+	7770	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	-135	0	-135	0	multi-exon	FALSE	canonical	3	38	junction_1	10.5170991723003	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	24398850	False	NA	6	True	AATAAA	-15	NA	24398867	24419283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
WTC11_00024535	chr14	+	6929	8	FSM	ENSG00000100441.10	ENST00000553935.6	6778	8	-151	0	-132	0	multi-exon	FALSE	canonical	3	40	junction_1	19.6811315420509	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATCCCTCTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	24429802	24441843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24430120_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
WTC11_00024537	chr14	+	911	2	FSM	ENSG00000100441.10	ENST00000556510.1	911	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCTGGCAGAGCGGC	24428438	False	NA	NA	False	NA	NA	NA	24430223	24431665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24430932_24431462
WTC11_00024538	chr14	+	3657	7	ISM	ENSG00000100441.10	ENST00000556842.5	2443	8	299	-791	10	0	3prime_fragment	FALSE	canonical	3	65	junction_1	14.4846662217517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATGGGGATG	24428448	False	NA	28	True	CATAAA	-22	NA	24430233	24438408	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
WTC11_00024540	chr14	+	1894	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-28	665	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATCTTTTAATTGA	24442615	True	NA	15	True	AATAAA	-15	NA	24442981	24446046	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24443113_24444283
WTC11_00024542	chr14	+	1025	9	FSM	ENSG00000092140.16	ENST00000544007.5	1003	9	-22	0	-22	0	multi-exon	FALSE	canonical	3	7	junction_6	203.965530176057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTGCCATTTCTTT	30550091	True	NA	NA	False	NA	NA	NA	30559135	30607919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30601769_30601895_30601998_30602132_30607887
WTC11_00024544	chr14	+	5794	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	-24	0	-24	0	multi-exon	TRUE	canonical	3	318	junction_7	41.3792810227435	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	30550089	True	NA	-94	True	AATAAA	-17	NA	30559133	30620064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
WTC11_00024546	chr14	+	4066	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	-11	681	0	-681	multi-exon	FALSE	canonical	3	79	junction_10	122.388112167808	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTTTCGTTTGAGAGAC	30612508	True	NA	NA	False	NA	NA	NA	30622303	30661258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
WTC11_00024548	chr14	+	2136	25	FSM	ENSG00000092108.22	ENST00000676509.1	2126	25	-10	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_15	114.577454394639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612498	True	NA	NA	False	NA	NA	NA	30622293	30735774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024549	chr14	+	2132	25	FSM	ENSG00000092108.22	ENST00000678475.1	2122	25	-10	0	-2	0	multi-exon	FALSE	canonical	1	3	junction_12	115.902070432566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612498	True	NA	NA	False	NA	NA	NA	30622293	30735774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673930_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024553	chr14	+	2189	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	-18	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	147.39513692415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024554	chr14	+	2073	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	-15	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	101.629093225277	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	30612508	True	NA	NA	False	ATTAAA	-12	NA	30622303	30735789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024555	chr14	+	2231	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	-41	0	-13	0	multi-exon	FALSE	canonical	3	389	junction_1	56.2723875201881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	30612482	True	NA	NA	False	GATAAA	-23	NA	30622277	30735850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024558	chr14	+	3857	5	FSM	ENSG00000092108.22	ENST00000677334.1	3857	5	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_2	48.1890807133732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCCTAACAGTGAAAATC	30715796	False	NA	93	True	AAAAAG	-42	NA	30715808	30735704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00024561	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	14.624978632463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
WTC11_00024562	chr14	+	2755	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	-219	0	-174	0	multi-exon	FALSE	canonical	3	27	junction_1	19.197968212055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	NA	False	NA	4	True	AATAAA	-22	NA	30874339	30890618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
WTC11_00024563	chr14	+	1492	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	-451	3019	92	314	multi-exon	FALSE	canonical	3	26	junction_5	7.38647412504775	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATTTTGAGTAACGCTG	NA	False	NA	26	True	AATAAA	-20	NA	31025197	31093431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
WTC11_00024565	chr14	+	3042	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	-8	6	-2	0	multi-exon	FALSE	canonical	3	66	junction_4	10.6249705881946	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACTGCTATATCTGAA	31560446	True	NA	16	True	AATAAA	-18	NA	31561395	31861218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
WTC11_00024566	chr14	+	578	7	FSM	ENSG00000151413.17	ENST00000548937.5	578	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	33.5530260268065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCAAGTGAGCAACTTG	31560486	True	NA	NA	False	AAAAAG	-41	NA	31561435	31703177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31703116
WTC11_00024567	chr14	+	9583	7	FSM	ENSG00000100852.14	ENST00000539826.6	4881	7	-57	-4645	-39	0	multi-exon	FALSE	canonical	3	49	junction_1	38.3728057642678	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	32076912	False	NA	13	True	AATAAA	-20	NA	32076927	32159728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077054_32090501_32094387_32117139_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
WTC11_00024568	chr14	+	9642	7	FSM	ENSG00000100852.14	ENST00000556611.5	4824	7	-39	-4779	-39	62	multi-exon	FALSE	canonical	3	32	junction_2	47.5815090134813	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTGGGATTGTTTA	32076912	False	NA	75	True	AGTAAA	-29	NA	32076927	32159790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077054_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
WTC11_00024569	chr14	+	9823	7	NIC	ENSG00000100852.14	novel	9589	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	54.9989898897142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	32074556	False	NA	13	True	AATAAA	-20	NA	32077066	32159728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_32077436_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
WTC11_00024570	chr14	+	9589	7	FSM	ENSG00000100852.14	ENST00000345122.8	9589	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	48.0234317807464	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	32076659	True	NA	13	True	AATAAA	-20	NA	32077303	32159728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077436_32090501_32094387_32117139_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
WTC11_00024571	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34541000_34541700
WTC11_00024572	chr14	+	2117	1	FSM	ENSG00000258738.1	ENST00000557373.1	2117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCTTTGGGTGTTTTA	34874062	False	NA	4	True	AATAAA	-15	NA	34874342	34876459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34874300_34876500
WTC11_00024573	chr14	+	2383	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	-309	113	1	0	multi-exon	FALSE	canonical	3	607	junction_11	48.5708646092376	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATCTCGAAGGC	34982310	True	NA	-75	True	NA	NA	NA	34982682	35029454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
WTC11_00024574	chr14	+	2271	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	-18	0	1	0	multi-exon	FALSE	canonical	2	6	junction_1	179.561861825451	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982310	True	NA	25	True	AATAAA	-10	NA	34982682	35029554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
WTC11_00024575	chr14	+	2312	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	-8	0	1	0	multi-exon	FALSE	canonical	3	35	junction_13	177.02962971186	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982310	True	NA	25	True	AATAAA	-10	NA	34982682	35029554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
WTC11_00024577	chr14	+	1613	14	FSM	ENSG00000100883.13	ENST00000677561.1	1814	14	0	201	0	-201	multi-exon	FALSE	canonical	3	607	junction_11	47.3862387334316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAAAATAAGCTTGTT	34982590	False	NA	NA	False	AAAAAG	-29	NA	34982962	35023080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909
WTC11_00024578	chr14	+	570	3	FSM	ENSG00000100883.13	ENST00000555317.5	644	3	0	74	0	-74	multi-exon	FALSE	canonical	3	631	junction_1	43.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAGAGCATGTGTAGTAC	34973689	True	NA	NA	False	NA	NA	NA	34982991	34999792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557
WTC11_00024580	chr14	+	2973	6	NNC	ENSG00000151327.13	novel	3053	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.22205101856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	NA	False	NA	10	True	TATAAA	-17	NA	35046251	35083378	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_35046402_35046501_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
WTC11_00024581	chr14	+	3073	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	344	junction_1	16.1148223694833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	NA	False	NA	10	True	TATAAA	-17	NA	35046251	35083378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
WTC11_00024582	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.22205101856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	35041806	True	NA	NA	False	NA	NA	NA	35046377	35081387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
WTC11_00024583	chr14	+	606	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35045638	False	NA	9	True	AATAAA	-27	NA	35046288	35050396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_35046407_35046504_35046629_35050032
WTC11_00024584	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35046354	False	NA	9	True	AATAAA	-27	NA	35046452	35050396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046629_35050032
WTC11_00024585	chr14	+	731	4	FSM	ENSG00000151327.13	ENST00000553955.2	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	166.513930014545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGAGGTATGCCT	35046668	False	NA	13	True	NA	NA	NA	35046680	35079012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35047085_35053277_35053452_35077149_35077217_35078926
WTC11_00024586	chr14	+	1858	1	FSM	ENSG00000279434.1	ENST00000624600.1	2025	1	118	49	118	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTATTTAATAGAAATAAA	NA	False	NA	NA	False	AATGAA	-42	NA	35086152	35088010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35086200_35088000
WTC11_00024587	chr14	+	587	2	FSM	ENSG00000100890.16	ENST00000603611.5	603	2	16	0	16	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGCTGTGGCATCAGGAA	35121823	False	NA	NA	False	NA	NA	NA	35121861	35123347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122053_35122951
WTC11_00024588	chr14	+	6195	8	FSM	ENSG00000100890.16	ENST00000534898.9	6186	8	-9	0	-4	0	multi-exon	FALSE	canonical	3	189	junction_2	42.8433311077484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCATCTCCATTTAT	35118474	True	NA	15	True	AATAAA	-29	NA	35122542	35277622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
WTC11_00024589	chr14	+	6130	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	-12	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	87.0314438707196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	35118483	True	NA	7	True	AATAAA	-21	NA	35122551	35277614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
WTC11_00024590	chr14	+	1589	6	FSM	ENSG00000100890.16	ENST00000321130.14	1589	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.902502246309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTTTAATTACTTA	35118483	True	NA	25	True	AATAAA	-31	NA	35122551	35274078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
WTC11_00024592	chr14	+	2638	8	NIC	ENSG00000100890.16	novel	2232	7	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	91.7990262720133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCAGTTTTTAATTAC	35118616	False	NA	22	True	AATAAA	-28	NA	35122684	35274075	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_35122768_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
WTC11_00024593	chr14	+	2640	8	NIC	ENSG00000100890.16	novel	2232	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	97.530528972382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCAGTTTTTAATTAC	35118653	False	NA	22	True	AATAAA	-28	NA	35122721	35274075	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_35122807_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
WTC11_00024595	chr14	+	912	7	FSM	ENSG00000100902.11	ENST00000540871.5	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	936.880239589529	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTGCATCCTGTTG	35278606	False	NA	NA	False	AATAAA	-15	NA	35278632	35317467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
WTC11_00024597	chr14	+	985	6	FSM	ENSG00000100902.11	ENST00000622405.4	978	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	27	junction_1	1035.97247067671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGTTTTCACCTCC	35266503	True	NA	NA	False	AATAAA	-26	NA	35292309	35317478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
WTC11_00024599	chr14	+	1023	7	FSM	ENSG00000100902.11	ENST00000261479.9	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	2380	junction_5	135.980901436766	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	35266575	True	NA	NA	False	AATAAA	-41	NA	35292381	35317493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
WTC11_00024600	chr14	+	431	1	FSM	ENSG00000259022.2	ENST00000554535.2	372	1	-80	21	-80	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGCAGCATGAGTG	NA	False	NA	NA	False	AAGAAA	-40	NA	35430179	35430610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35430200_35430600
WTC11_00024601	chr14	+	2614	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	23	0	23	0	multi-exon	TRUE	canonical	3	143	junction_6	11.255725566337	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	35824706	True	NA	3	True	AATAAA	-20	NA	35826360	35871963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
WTC11_00024602	chr14	+	501	1	FSM	ENSG00000257307.1	ENST00000550416.1	709	1	77	131	77	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGAGCAGTTACTCTCA	NA	False	NA	NA	False	NA	NA	NA	35881077	35881578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35881100_35881600
WTC11_00024603	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.55965126804031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	37196854	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
WTC11_00024604	chr14	+	5953	13	FSM	ENSG00000151338.19	ENST00000537471.5	5954	13	1	0	1	0	multi-exon	FALSE	canonical	3	6	junction_1	8.71142289691465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATTTCAATGCAATT	NA	False	NA	8	True	AATAAA	-20	NA	37219552	37551258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37219692_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
WTC11_00024605	chr14	+	586	4	FSM	ENSG00000151338.19	ENST00000554114.1	595	4	9	0	9	0	multi-exon	FALSE	canonical	2	3	junction_1	13.1993265821489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTCACAGCCTTAG	NA	False	NA	NA	False	AATACA	-2	NA	37240432	37267169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37240570_37247102_37247241_37247828_37247908_37266937
WTC11_00024606	chr14	+	2883	4	FSM	ENSG00000151338.19	ENST00000539174.2	2888	4	0	5	0	-5	multi-exon	FALSE	canonical	3	4	junction_3	16.8720676464584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGTTCAGCTTCTTCA	NA	False	NA	NA	False	AATAAA	-10	NA	37267066	37278867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37267170_37268657_37268794_37270419_37270526_37276329
WTC11_00024607	chr14	+	288	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGCCCGGCCTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	37451813	37452101	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_37451800_37452100
WTC11_00024608	chr14	+	844	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	13	2	13	0	multi-exon	FALSE	canonical	3	30	junction_1	27	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	38185376	True	NA	16	True	AATAAA	-24	NA	38190995	38202923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_38191232_38199045_38199512_38202781
WTC11_00024609	chr14	+	3641	3	NNC	ENSG00000258649.2	novel	939	4	NA	NA	2258	646	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	16.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGAAAAAAGATTTC	38193229	False	NA	NA	False	NA	NA	NA	38193240	38203571	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_38193324_38196740_38199512_38202784
WTC11_00024610	chr14	+	4761	2	NNC	ENSG00000258649.2	novel	859	3	NA	NA	5773	646	intron_retention	FALSE	canonical	0	0	junction_1	0	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGAAAAAAGATTTC	38196744	False	NA	NA	False	NA	NA	NA	38196755	38203571	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_38196991_38199045
WTC11_00024613	chr14	+	1110	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	-16	0	5	0	multi-exon	FALSE	canonical	3	56	junction_5	122.823043440553	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	39110305	True	NA	26	True	NA	NA	NA	39114289	39136775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
WTC11_00024616	chr14	+	1340	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	-32	12	6	-12	multi-exon	FALSE	canonical	3	370	junction_5	29.3030146344479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTAAGCTCAGCA	39110306	True	NA	-8	True	AATAAA	-10	NA	39114290	39136961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
WTC11_00024618	chr14	+	601	4	FSM	ENSG00000100941.9	ENST00000556530.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_2	23.3666428910958	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTAGTGAAATAATGCAG	39165472	True	NA	55	True	NA	NA	NA	39175229	39177708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411
WTC11_00024619	chr14	+	3561	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	-24	0	0	0	multi-exon	FALSE	canonical	3	630	junction_8	42.3170695464608	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	39165472	True	NA	5	True	ATTAAA	-15	NA	39175229	39183220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
WTC11_00024620	chr14	+	624	2	FSM	ENSG00000100941.9	ENST00000554117.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGGTAGGTTTAAAAAAA	39165524	False	NA	NA	False	NA	NA	NA	39175281	39176590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39175393_39176077
WTC11_00024623	chr14	+	1330	1	FSM	ENSG00000270503.1	ENST00000604759.1	1271	1	84	-143	84	143	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAGACATAGGACTT	NA	False	NA	NA	False	NA	NA	NA	39215148	39216478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39215100_39216500
WTC11_00024624	chr14	+	3558	24	FSM	ENSG00000150527.18	ENST00000396158.6	3695	24	-5	142	-5	-142	multi-exon	FALSE	canonical	3	12	junction_5	27.9700758271575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCATTTTGAGCTTTG	39267082	False	NA	NA	False	NA	NA	NA	39267118	39351051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
WTC11_00024625	chr14	+	3516	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	344	0	-142	multi-exon	FALSE	canonical	3	81	junction_18	17.0667542924657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCATTTTGAGCTTTG	39267114	False	NA	NA	False	NA	NA	NA	39267145	39351051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
WTC11_00024626	chr14	+	4082	24	FSM	ENSG00000150527.18	ENST00000341502.9	4091	24	0	9	0	-9	multi-exon	FALSE	canonical	2	3	junction_23	29.4713343151239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTCTGTGTGCTAGT	39267203	False	NA	NA	False	AATATA	-5	NA	39267245	39388504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39386884
WTC11_00024628	chr14	+	2765	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	-3	0	0	0	multi-exon	FALSE	canonical	3	61	junction_18	19.1583764559984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	39264696	True	NA	19	True	AATAAA	-20	NA	39267410	39350694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
WTC11_00024629	chr14	+	1777	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-193	-7256	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	51.6978400580398	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAAATGGTTTTTA	40954474	False	NA	NA	False	AATAAA	-17	NA	40954499	41142053	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
WTC11_00024630	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	46.5999523128034	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40953133	True	NA	-1	True	AATAAA	-11	NA	40954692	41149309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
WTC11_00024631	chr14	+	696	4	FSM	ENSG00000251363.3	ENST00000515218.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	74.5534856477028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACAACTTGCTGATAG	40953338	False	NA	NA	False	AATAAA	-35	NA	40954897	40975877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_40975340
WTC11_00024632	chr14	+	4720	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	-303	0	-303	0	multi-exon	FALSE	canonical	2	13	junction_1	4.60434577328853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	41606562	False	NA	10	True	AATAAA	-19	NA	41606572	41904549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
WTC11_00024633	chr14	+	240	1	FSM	ENSG00000259051.1	ENST00000554987.1	333	1	165	-72	165	72	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTAACTTTTTAAACAT	NA	False	NA	NA	False	NA	NA	NA	43300427	43300667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_43300400_43300700
WTC11_00024634	chr14	+	2950	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	-18	3	-18	-2	multi-exon	TRUE	canonical	3	54	junction_1	6.05702071979286	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCAAGGCTCCCAGATT	44896591	True	NA	14	True	AATAAA	-27	NA	44897256	44907254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
WTC11_00024635	chr14	+	771	3	FSM	ENSG00000179476.8	ENST00000555826.5	3498	3	0	2727	0	0	multi-exon	FALSE	canonical	3	63	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGTTTTTGTTGTTGT	44899748	False	NA	NA	False	NA	NA	NA	44900413	44904529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44900960_44903206_44903297_44904394
WTC11_00024636	chr14	+	3842	2	FSM	ENSG00000198718.13	ENST00000555945.1	3908	2	-3	69	2	-69	multi-exon	FALSE	canonical	3	23	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGTTGCAGTGAGTCA	44961739	True	NA	NA	False	NA	NA	NA	44962215	44997335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44964468_44995745
WTC11_00024637	chr14	+	4979	5	FSM	ENSG00000198718.13	ENST00000555607.1	4992	5	2	11	2	-11	multi-exon	FALSE	canonical	3	23	junction_1	4.96865172858795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAAACAGTTTATGTA	44961739	True	NA	NA	False	ATTAAA	-24	NA	44962215	45008136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007
WTC11_00024638	chr14	+	6457	21	NIC	ENSG00000198718.13	novel	6424	20	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	6.82275604136627	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATGTGTGAGAGGTG	44961739	True	NA	-1	True	AATAAA	-12	NA	44962215	45074426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007_45006268_45008912_45009146_45011974_45012076_45022909_45022974_45025782_45025873_45027298_45027475_45028175_45028330_45032222_45032377_45043685_45043792_45044634_45044871_45046544_45046704_45052435_45052563_45054430_45054550_45066577_45066768_45068423_45068644_45071711_45071799_45073295
WTC11_00024641	chr14	+	3521	13	FSM	ENSG00000185246.18	ENST00000477626.5	3507	13	-14	0	-3	0	multi-exon	FALSE	canonical	3	236	junction_7	42.883806189905	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	45080366	True	NA	16	True	AATAAA	-21	NA	45084103	45115601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45084250_45095220_45095564_45096102_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00024642	chr14	+	3198	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	-24	0	-3	0	multi-exon	FALSE	canonical	3	56	junction_3	92.8042706617601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	45080366	True	NA	16	True	AATAAA	-21	NA	45084103	45115601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00024643	chr14	+	3544	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	-12	0	-3	0	multi-exon	FALSE	canonical	3	202	junction_3	51.6275922741287	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	45080366	True	NA	NA	False	NA	NA	NA	45084103	45116282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00024644	chr14	+	2912	15	NIC	ENSG00000185246.18	novel	3174	15	NA	NA	16	-6	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	87.6654412630013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCAGTAATTGTTTATG	45080406	True	NA	5	True	AATAAA	-10	NA	45084143	45115590	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45109893_45109994_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00024648	chr14	+	3223	14	FSM	ENSG00000185246.18	ENST00000554081.5	3223	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	121.921402560694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	45096184	False	NA	NA	False	NA	NA	NA	45096197	45116282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45096229_45096595_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45109893_45109994_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00024651	chr14	+	6191	22	FSM	ENSG00000187790.11	ENST00000542564.6	6167	22	-24	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	11.1275841606209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAGACCTCTCACAA	45134398	True	NA	NA	False	NA	NA	NA	45135929	45200028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45136540_45137068_45137242_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
WTC11_00024652	chr14	+	7115	23	FSM	ENSG00000187790.11	ENST00000267430.10	7131	23	-3	19	-3	-19	multi-exon	FALSE	canonical	3	29	junction_4	8.14588067067192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTCCTTATAAATTAC	45134395	True	NA	NA	False	ATTAAA	-2	NA	45135926	45200871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
WTC11_00024653	chr14	+	819	2	FSM	ENSG00000187790.11	ENST00000554030.1	917	2	0	98	0	-98	multi-exon	FALSE	canonical	3	46	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAAGGTGGTGGGGACT	45134982	False	NA	NA	False	NA	NA	NA	45136513	45137861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45136540_45137068
WTC11_00024656	chr14	+	351	1	FSM	ENSG00000258608.1	ENST00000555084.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGTATGATGAATTT	NA	False	NA	NA	False	AATGAA	-37	NA	45290035	45290386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45290000_45290400
WTC11_00024657	chr14	+	4446	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGCTCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	47104284	47108730	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_47104300_47108700
WTC11_00024658	chr14	+	626	2	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	142	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGCTCTCTTCA	47106521	False	NA	NA	False	AATAAA	-23	NA	47106532	47108730	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47106733_47108304
WTC11_00024659	chr14	+	1337	2	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	47106638	False	NA	NA	False	AATAAA	-22	NA	47106649	47108729	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47106733_47107475
WTC11_00024660	chr14	+	328	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-57794	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	10	True	NA	NA	NA	49528785	49586878	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49528815_49586579
WTC11_00024661	chr14	+	350	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-56816	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	10	True	NA	NA	NA	49529763	49586878	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49529815_49586579
WTC11_00024663	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	128.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	49598746	False	NA	8	True	ATTAAA	-15	NA	49598760	49614670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49599204_49602369_49602469_49614255
WTC11_00024664	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	96.858430482615	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	49592057	True	NA	10	True	ATTAAA	-17	NA	49598939	49614672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
WTC11_00024665	chr14	+	579	1	FSM	ENSG00000258568.1	ENST00000555758.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGGATCAAGATGTATA	49599981	False	NA	NA	False	AAGAAA	-19	NA	49599993	49600572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49600000_49600600
WTC11_00024666	chr14	+	2683	1	FSM	ENSG00000168282.6	ENST00000305386.4	2683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGCAAGAAACTGT	49617407	True	NA	7	True	AATAAA	-21	NA	49620798	49623481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49620800_49623500
WTC11_00024667	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_6	74.942199949917	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	49765558	True	NA	27	True	AATAAA	-19	NA	49768152	49786385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
WTC11_00024668	chr14	+	1771	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	-15	0	0	0	multi-exon	FALSE	canonical	3	582	junction_6	76.4049671701027	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	49765558	True	NA	-8	True	NA	NA	NA	49768152	49783115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
WTC11_00024672	chr14	+	3875	2	FSM	ENSG00000165527.8	ENST00000298316.7	3875	2	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCACGTTATGTTACT	49884759	True	NA	17	True	AATAAA	-17	NA	49893081	49897054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49893158_49893255
WTC11_00024673	chr14	+	2966	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	45	junction_1	64.8320908192849	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311084	True	NA	13	True	AATAAA	-25	NA	50312301	50327957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
WTC11_00024674	chr14	+	2980	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	-22	-50	-22	50	multi-exon	FALSE	canonical	3	115	junction_4	35.2526594741446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATAAGCATAAATTTAA	50311084	True	NA	10	True	AATAAA	-24	NA	50312301	50328007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
WTC11_00024675	chr14	+	3844	14	FSM	ENSG00000198513.14	ENST00000556478.3	3844	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.08973343085225	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATACATTCGATTTA	NA	False	NA	NA	False	ATTAAA	-5	NA	50532508	50634017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50532874_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
WTC11_00024681	chr14	+	1834	13	FSM	ENSG00000131969.15	ENST00000337334.7	1815	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	8	junction_2	117.64432625503	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50871706	True	NA	21	True	AATAAA	-21	NA	50872033	50904970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50872279_50877951_50878080_50878744_50878848_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
WTC11_00024682	chr14	+	4094	12	NIC	ENSG00000131969.15	novel	1815	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_7	123.411962129666	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50871725	True	NA	21	True	AATAAA	-21	NA	50872052	50904970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_50872279_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50893212_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
WTC11_00024683	chr14	+	1580	12	FSM	ENSG00000131969.15	ENST00000382029.7	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	120.713375432321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50871832	True	NA	21	True	AATAAA	-21	NA	50872159	50904970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50872279_50878744_50878848_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
WTC11_00024685	chr14	+	3979	4	FSM	ENSG00000131969.15	ENST00000555292.1	588	4	-87	-3304	-87	3299	multi-exon	FALSE	canonical	3	21	junction_3	3.55902608401044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACGCGCATGAAAAAATTT	NA	False	NA	55	True	NA	NA	NA	50885690	50896868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50885896_50886646_50886685_50888823_50888904_50893212
WTC11_00024688	chr14	+	4311	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	-286	0	286	multi-exon	FALSE	canonical	3	1038	junction_7	80.7455059721213	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCATGATCCGCC	51227117	True	NA	NA	False	NA	NA	NA	51240246	51257941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
WTC11_00024689	chr14	+	4828	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	10.4099406292892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	51650261	True	NA	21	True	AATAAA	-21	NA	51651857	51730727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
WTC11_00024690	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	13.3797515477415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	51650313	True	NA	21	True	AATAAA	-21	NA	51651909	51730727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
WTC11_00024692	chr14	+	281	3	FSM	ENSG00000186469.9	ENST00000554832.5	576	3	87	208	25	-208	multi-exon	FALSE	canonical	0	0	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGGTGTTCCTTGTT	51847230	True	NA	NA	False	NA	NA	NA	51847258	51913128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51847379_51877616_51877658_51913008
WTC11_00024693	chr14	+	909	5	FSM	ENSG00000186469.9	ENST00000555472.5	908	5	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.4329277266283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTGACCTTCTTGG	51859001	True	NA	12	True	ATTAAA	-23	NA	51860640	51967040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51860791_51877616_51877658_51913008_51913129_51950649_51950766_51966558
WTC11_00024694	chr14	+	3786	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	-214	1	-16	0	multi-exon	FALSE	canonical	3	75	junction_2	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	NA	False	NA	7	True	AATAAA	-17	NA	51860397	51969794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
WTC11_00024695	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2149	junction_3	98.0840955298991	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	51968923	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
WTC11_00024698	chr14	+	2445	2	FSM	ENSG00000125384.7	ENST00000245457.6	2458	2	0	13	0	-13	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAACAAAAATTTGAAA	52314187	True	NA	NA	False	AATAAA	-2	NA	52314311	52328585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52315392_52327220
WTC11_00024699	chr14	+	4217	7	FSM	ENSG00000180998.12	ENST00000321662.11	4200	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	5	junction_3	2.92498812913071	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTTCTGGTTTTCTT	NA	False	NA	4	True	AATAAA	-17	NA	52552818	52637713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52553592_52598271_52598316_52600112_52600342_52632159_52632310_52633529_52633656_52633827_52633947_52634937
WTC11_00024701	chr14	+	2156	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	7	0	-7	multi-exon	FALSE	canonical	3	955	junction_4	72.3017182474833	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTACACAAAGGAATCA	52693083	True	NA	NA	False	AATAAA	-9	NA	52707199	52728583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
WTC11_00024704	chr14	+	2939	3	FSM	ENSG00000100519.12	ENST00000557557.1	2939	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATATATTCTTGTCTT	52721483	False	NA	8	True	AATAAA	-22	NA	52721499	52727990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52723875_52723964_52724037_52727498
WTC11_00024706	chr14	+	4883	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	367	junction_5	32.3061913570758	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	52722090	True	NA	31	True	ATTAAA	-27	NA	52730146	52774989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
WTC11_00024707	chr14	+	920	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	4	509	4	-509	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCGAATTGTCTCAAA	52951304	True	NA	NA	False	ATTAAA	-43	NA	52951435	52952355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52951400_52952400
WTC11_00024708	chr14	+	583	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	106	0	-24	0	multi-exon	FALSE	canonical	3	147	junction_1	455.286898559579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	54386009	True	NA	NA	False	AATACA	-11	NA	54396954	54417951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
WTC11_00024710	chr14	+	1241	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	-42	-261	-18	261	multi-exon	FALSE	canonical	3	29	junction_8	528.558402047494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTAAATGATGTCCCCC	54386015	True	NA	NA	False	NA	NA	NA	54396960	54420479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
WTC11_00024711	chr14	+	853	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	-12	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_1	68.4621152498942	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386049	True	NA	16	True	NA	NA	NA	54396994	54420218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
WTC11_00024712	chr14	+	866	8	FSM	ENSG00000100526.21	ENST00000458126.6	845	8	-21	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	429.255977101718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386033	True	NA	16	True	NA	NA	NA	54396978	54420218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417850_54417952_54419991
WTC11_00024714	chr14	+	665	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	54	0	-36	0	multi-exon	FALSE	canonical	2	2	junction_2	114.499878699596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	54508450	True	NA	NA	False	NA	NA	NA	54509865	54538281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
WTC11_00024715	chr14	+	1966	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	-4	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	20.4978047605103	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	54508486	True	NA	16	True	AATAAA	-25	NA	54509901	54539292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
WTC11_00024717	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	83.2163445484119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	54508486	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
WTC11_00024718	chr14	+	1940	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	-3	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	72.6570024154589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	54508486	True	NA	NA	False	ATTAAA	-29	NA	54509901	54539087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
WTC11_00024719	chr14	+	6839	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	-62	2	-62	0	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGTGTTTTATTT	55024133	True	NA	12	True	ATTAAA	-19	NA	55027167	55049486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55027472_55042951
WTC11_00024720	chr14	+	7022	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	-120	1	-114	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	55027049	False	NA	14	True	ATTAAA	-21	NA	55027115	55049488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55027472_55031862_55031992_55042951
WTC11_00024721	chr14	+	6481	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	855	junction_1	96.858430482615	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	55038193	True	NA	NA	False	NA	NA	NA	55051631	55070194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
WTC11_00024723	chr14	+	1120	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	-172	10	-172	0	multi-exon	FALSE	canonical	3	43	junction_1	11.0163514831363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTCAATATGTCATTT	NA	False	NA	7	True	AATAAA	-16	NA	55129079	55145413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
WTC11_00024724	chr14	+	1713	4	FSM	ENSG00000131981.16	ENST00000556438.6	1734	4	21	0	21	0	multi-exon	FALSE	canonical	3	57	junction_3	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTCAATATGTCATTT	55136375	False	NA	7	True	AATAAA	-16	NA	55137208	55145413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55138369_55140274_55140364_55142583_55142750_55145115
WTC11_00024725	chr14	+	705	1	FSM	ENSG00000279392.1	ENST00000623123.1	465	1	-17	-223	-17	223	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCACTGCTTCAATCT	55229162	True	NA	NA	False	ATTAAA	-36	NA	55229199	55229904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55229200_55229900
WTC11_00024726	chr14	+	3348	2	FSM	ENSG00000178974.11	ENST00000313833.5	3348	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTTTTGCAAAGATTT	55269673	True	NA	11	True	AATAAA	-21	NA	55271420	55353611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55271538_55350380
WTC11_00024727	chr14	+	690	1	FSM	ENSG00000258469.1	ENST00000556017.1	588	1	-45	-57	-45	57	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCAGGCAGGTTCCATC	NA	False	NA	NA	False	NA	NA	NA	55298598	55299288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55298600_55299300
WTC11_00024728	chr14	+	4765	44	NIC	ENSG00000126777.18	novel	4793	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	202.628711706916	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGACTTGTTCTAATT	55566300	True	NA	16	True	AATAAA	-17	NA	55580206	55684576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
WTC11_00024729	chr14	+	4733	44	FSM	ENSG00000126777.18	ENST00000395314.8	4728	44	-5	0	-5	0	multi-exon	FALSE	canonical	3	268	junction_39	181.007115846367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566295	True	NA	19	True	AATAAA	-20	NA	55580201	55684579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
WTC11_00024730	chr14	+	4449	42	FSM	ENSG00000126777.18	ENST00000438792.6	4449	42	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_32	140.091238222702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566408	True	NA	19	True	AATAAA	-20	NA	55580314	55684579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
WTC11_00024731	chr14	+	4800	46	FSM	ENSG00000126777.18	ENST00000459737.5	4793	46	-7	0	0	0	multi-exon	FALSE	canonical	3	47	junction_45	253.922953221719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566408	True	NA	19	True	AATAAA	-20	NA	55580314	55684579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55680685_55680742_55684098
WTC11_00024738	chr14	+	2485	9	FSM	ENSG00000126777.18	ENST00000334975.13	2485	9	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	340.582222084477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTCTAATTTTTATTG	55667608	False	NA	23	True	AATAAA	-24	NA	55667650	55684583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55668804_55670728_55670810_55671565_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
WTC11_00024739	chr14	+	3442	4	FSM	ENSG00000126777.18	ENST00000556631.1	5299	4	1857	0	242	0	multi-exon	FALSE	canonical	3	1032	junction_1	66.1379030679248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55673147	False	NA	19	True	AATAAA	-20	NA	55673171	55684579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55675919_55678351_55678445_55679564_55679686_55684098
WTC11_00024740	chr14	+	319	3	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1777	-10	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAATAAATTTCTAT	55958198	True	NA	NA	False	ATTAAA	-42	NA	55958259	55962937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_55958359_55961980_55962088_55962824
WTC11_00024741	chr14	+	6808	6	FSM	ENSG00000139946.10	ENST00000267460.9	5871	6	-218	-719	-218	719	multi-exon	FALSE	canonical	3	66	junction_1	5.54977477020464	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGCCAGCATGGTGA	56118144	True	NA	NA	False	NA	NA	NA	56118192	56302243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_56118738_56178334_56178465_56279675_56279778_56288436_56288635_56290267_56290457_56296599
WTC11_00024742	chr14	+	4267	16	FSM	ENSG00000070269.14	ENST00000261556.11	4259	16	-8	0	-8	0	multi-exon	TRUE	canonical	3	34	junction_8	12.9587379358057	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTCTTTATTGGTTCA	56578669	True	NA	14	True	AATAAA	-22	NA	56579789	56649515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244_56612286_56615943_56616028_56617182_56617298_56618593_56618764_56621530_56621703_56625381_56625531_56632994_56633172_56634898_56634953_56636507_56636599_56647242
WTC11_00024744	chr14	+	2696	15	FSM	ENSG00000070269.14	ENST00000539559.6	2680	15	-16	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	16.3858139242207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATTTGATGTTTGCTTA	56578704	True	NA	NA	False	ACTAAA	-11	NA	56579824	56648094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244_56612286_56615943_56616028_56618593_56618764_56621530_56621703_56625381_56625531_56632994_56633172_56634898_56634953_56636507_56636599_56647242
WTC11_00024748	chr14	+	454	1	FSM	ENSG00000258758.1	ENST00000556703.1	1620	1	499	667	499	-667	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATATCACCTCACGACC	NA	False	NA	NA	False	NA	NA	NA	57041383	57041837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57041400_57041800
WTC11_00024749	chr14	+	3321	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	293	-1923	123	1923	multi-exon	FALSE	canonical	3	282	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGTTTGCTTATTTT	57265753	False	NA	10	True	ATTAAA	-17	NA	57269216	57277392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57274243
WTC11_00024750	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	21.2458879574858	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	57265507	True	NA	5	True	AATAAA	-17	NA	57268970	57298742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
WTC11_00024751	chr14	+	817	4	FSM	ENSG00000053770.12	ENST00000555448.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	111.483930082621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGTTTTATTTATT	57265562	True	NA	NA	False	NA	NA	NA	57269025	57283019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57280194_57280423_57282088_57282229_57282933
WTC11_00024752	chr14	+	6844	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	34	-5584	-8	8	multi-exon	FALSE	canonical	3	13	junction_1	80.2426874480715	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTAGGTAAATGTAAACT	57386243	True	NA	21	True	AATAAA	-32	NA	57390577	57415914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
WTC11_00024753	chr14	+	7608	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	168	junction_1	11.8638105177047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	57386243	True	NA	13	True	AATAAA	-24	NA	57390577	57415906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
WTC11_00024754	chr14	+	1436	2	FSM	ENSG00000259039.3	ENST00000655475.1	1436	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCCACATGATAAAAACTA	NA	False	NA	NA	False	AATGAA	-14	NA	57578580	57581997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57579006_57580986
WTC11_00024755	chr14	+	698	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	-132	-26	-42	26	multi-exon	TRUE	canonical	3	401	junction_3	34.3155293643498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGGAACCAGATGACAGAA	58200025	False	NA	NA	False	AATAAA	-44	NA	58200037	58209283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
WTC11_00024756	chr14	+	2406	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	2	0	-2	multi-exon	TRUE	non_canonical	2	219	junction_5	67.456313023072	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGCTGGCTTCATTCT	58194757	True	NA	3	True	AATGAA	-15	NA	58200148	58235634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
WTC11_00024759	chr14	+	718	8	FSM	ENSG00000100567.13	ENST00000555743.1	640	8	-102	24	-66	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.183886533624	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGTTGCAAAAATGTAA	58244716	False	NA	NA	False	AAGAAA	-22	NA	58244776	58267504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473
WTC11_00024762	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.499424459637	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	58221145	True	NA	22	True	ATTAAA	-15	NA	58244842	58272004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
WTC11_00024766	chr14	+	730	3	FSM	ENSG00000100567.13	ENST00000557290.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	2603	junction_2	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	58269935	False	NA	22	True	ATTAAA	-15	NA	58269974	58272004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58270486_58270933_58270999_58271850
WTC11_00024767	chr14	+	1073	1	FSM	ENSG00000279636.2	ENST00000627309.1	1115	1	-349	391	-349	-391	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGTTCCCTCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	58287683	58288756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58287700_58288800
WTC11_00024768	chr14	+	5875	24	FSM	ENSG00000032219.19	ENST00000355431.8	5864	24	-11	0	-11	0	multi-exon	FALSE	canonical	3	26	junction_16	10.3571386666907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAAAGTGTCATTT	58296611	True	NA	NA	False	AATAAA	-23	NA	58298543	58373876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072_58351324_58353657_58353856_58359131_58359217_58360900_58361043_58364169_58365301_58365517_58365623_58366023_58366231_58366882_58367030_58371885
WTC11_00024769	chr14	+	619	3	FSM	ENSG00000032219.19	ENST00000553355.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAAAGGTGGACCAAAG	NA	False	NA	NA	False	NA	NA	NA	58351296	58359172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58351677_58353657_58353856_58359131
WTC11_00024771	chr14	+	4761	31	NIC	ENSG00000100578.18	novel	8558	31	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	17.6969551681136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGTCTGATTGTGAGT	58426126	True	NA	NA	False	AATAAA	-15	NA	58427687	58548119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_58427814_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
WTC11_00024772	chr14	+	5947	30	FSM	ENSG00000100578.18	ENST00000650904.1	5942	30	-5	0	4	0	multi-exon	FALSE	canonical	1	2	junction_17	19.3210561425543	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAACCTGTGAAACAT	58426126	True	NA	-68	True	TATAAA	-3	NA	58427687	58548736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
WTC11_00024774	chr14	+	8558	31	FSM	ENSG00000100578.18	ENST00000652326.2	8558	31	-11	11	-11	-3	multi-exon	FALSE	canonical	3	44	junction_2	14.941515615522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATTATTTCAATAT	58426146	True	NA	-1	True	AATAAA	-12	NA	58427707	58551286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
WTC11_00024775	chr14	+	4807	30	FSM	ENSG00000100578.18	ENST00000261244.9	4807	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	19.2376711295186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCAATATTTTAAAATAAA	58427964	True	NA	NA	False	NA	NA	NA	58427989	58548045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
WTC11_00024778	chr14	+	4155	17	FSM	ENSG00000100578.18	ENST00000652414.1	4160	17	0	5	0	-5	multi-exon	FALSE	canonical	3	18	junction_16	18.0757952798763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGGGAGTTTTGTT	58460987	False	NA	10	True	AATAAA	-18	NA	58460997	58515817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58514195
WTC11_00024779	chr14	+	993	4	FSM	ENSG00000165617.15	ENST00000421793.5	993	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	56.8409085860605	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTCCCCACCGAAGCA	58634033	False	NA	NA	False	NA	NA	NA	58634080	58645856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58634186_58640735_58640869_58641591_58641748_58645257
WTC11_00024780	chr14	+	4187	4	FSM	ENSG00000165617.15	ENST00000335867.4	2571	4	-334	-1282	-117	131	multi-exon	FALSE	canonical	3	56	junction_3	34.7978287956144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTAGTTAAGGTACTT	58636651	True	NA	NA	False	AATGAA	-12	NA	58637844	58648452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645257
WTC11_00024781	chr14	+	3828	4	FSM	ENSG00000165617.15	ENST00000395153.8	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	25.0909456887451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGGTTATTGGTG	58636768	True	NA	5	True	TATAAA	-23	NA	58637961	58648321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645368
WTC11_00024782	chr14	+	460	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	-24	-60	-24	60	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTACAAATGATTCTCA	NA	False	NA	NA	False	AATAAA	-33	NA	58794629	58795089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58794600_58795100
WTC11_00024783	chr14	+	355	2	FSM	ENSG00000100592.16	ENST00000556596.1	2844	2	-12	2501	-12	-2501	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCAGTTTTCTATC	59186455	True	NA	NA	False	NA	NA	NA	59188633	59263660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59188769_59263440
WTC11_00024784	chr14	+	5906	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	-16	0	5	0	multi-exon	FALSE	canonical	3	43	junction_8	11.0471684406257	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	59186472	True	NA	16	True	AATAAA	-22	NA	59188650	59371403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
WTC11_00024785	chr14	+	540	4	FSM	ENSG00000050130.18	ENST00000554754.5	562	4	22	0	22	0	multi-exon	FALSE	canonical	3	76	junction_1	274.576036827688	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGACCTCTTCTGGTGA	59477981	True	NA	NA	False	NA	NA	NA	59484466	59498777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726
WTC11_00024786	chr14	+	611	5	FSM	ENSG00000050130.18	ENST00000557560.5	611	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	305.184677695326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGATGCTTTACAACCCAA	59478006	True	NA	NA	False	NA	NA	NA	59484491	59495152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59484989_59485117_59486712_59486805_59487673_59487829_59495017
WTC11_00024787	chr14	+	1653	7	FSM	ENSG00000050130.18	ENST00000425728.6	1636	7	-17	0	-6	0	multi-exon	FALSE	canonical	3	202	junction_1	171.836566409934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	59478000	True	NA	NA	False	AATAAA	-13	NA	59484485	59504703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
WTC11_00024790	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	97.135072050327	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	59478031	True	NA	74	True	ATTAAA	-21	NA	59484516	59505410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
WTC11_00024792	chr14	+	2302	6	FSM	ENSG00000050130.18	ENST00000602482.5	2302	6	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_2	59.0640330488869	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	59486649	False	NA	74	True	ATTAAA	-21	NA	59486680	59505410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
WTC11_00024794	chr14	+	409	4	FSM	ENSG00000131951.11	ENST00000570145.1	500	4	37	54	37	-54	multi-exon	FALSE	canonical	2	3	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAATTTGGAAAAACT	59920117	True	NA	NA	False	NA	NA	NA	59920185	59930938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59920274_59927910_59927992_59928267_59928487_59930917
WTC11_00024795	chr14	+	4067	2	FSM	ENSG00000126773.13	ENST00000391611.6	4073	2	6	0	2	0	multi-exon	FALSE	canonical	3	52	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTATGATATTTTGT	60090867	True	NA	7	True	AATAAA	-19	NA	60091924	60111157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60092420_60107585
WTC11_00024796	chr14	+	5729	10	NIC	ENSG00000126773.13	novel	18069	11	NA	NA	9	2499	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	35.4714282517947	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATAAAAAGGCATATTTC	60090878	True	NA	-25	True	AATAAA	-23	NA	60091935	60128689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60124311_60125636
WTC11_00024798	chr14	+	17879	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	12	178	8	-178	multi-exon	FALSE	canonical	3	50	junction_2	23.8671322114744	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGTAGAAAACGAAAAGCT	60090877	True	NA	NA	False	AAAACA	-45	NA	60091934	60148043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
WTC11_00024799	chr14	+	495	2	FSM	ENSG00000126773.13	ENST00000556907.1	495	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTCAGTGTCTGTCT	60090919	True	NA	NA	False	NA	NA	NA	60091976	60115770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60092420_60115718
WTC11_00024800	chr14	+	515	2	FSM	ENSG00000126773.13	ENST00000555569.1	515	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTCATCATGTCTGC	60092070	False	NA	NA	False	AGTAAA	-36	NA	60092185	60114980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60092420_60114699
WTC11_00024803	chr14	+	8252	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	158	junction_3	16.5819178625393	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	60247762	True	NA	NA	False	AATAAA	-16	NA	60249199	60299087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
WTC11_00024804	chr14	+	4125	4	FSM	ENSG00000100614.18	ENST00000325658.3	4125	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	74.2473344078201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	60249430	False	NA	7	True	AATAAA	-19	NA	60249440	60288555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60249678_60250379_60250482_60282683_60283538_60285623
WTC11_00024805	chr14	+	995	1	FSM	ENSG00000258427.3	ENST00000555532.2	525	1	-51	-419	-51	419	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAATTTTTTCATATTT	NA	False	NA	NA	False	NA	NA	NA	60397705	60398700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60397700_60398700
WTC11_00024807	chr14	+	2655	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	-19	12	0	-12	multi-exon	FALSE	canonical	3	502	junction_3	42.3883888606784	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTGTAAATATTTTGT	60723424	True	NA	NA	False	AATAAA	-15	NA	60734741	60969953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
WTC11_00024811	chr14	+	659	4	FSM	ENSG00000139974.16	ENST00000532148.5	559	4	-97	-3	26	3	multi-exon	FALSE	canonical	1	5	junction_3	52.563189485503	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGCATCTAAACACATAC	60980177	True	NA	NA	False	TTTAAA	-24	NA	60981139	61002239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61002028
WTC11_00024812	chr14	+	1704	17	FSM	ENSG00000139974.16	ENST00000354886.6	1730	17	26	0	26	0	multi-exon	TRUE	canonical	1	1	junction_15	34.2980957926238	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTTGTTTAATCACCC	60980177	True	NA	-11	True	NA	NA	NA	60981139	61083712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078809_61078928_61083554
WTC11_00024813	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	19.0717941823346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	60980282	True	NA	4	True	AAAAAG	-25	NA	60981244	61052630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
WTC11_00024814	chr14	+	1678	18	NNC	ENSG00000139974.16	novel	2501	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	38.1494964979223	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	60980282	True	NA	6	True	AATAAA	-17	NA	60981244	61083729	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052903_61052986_61078829_61078928_61083554
WTC11_00024815	chr14	+	329	5	FSM	ENSG00000139974.16	ENST00000554072.1	493	5	0	164	0	-164	multi-exon	FALSE	canonical	2	3	junction_4	38.0681953867004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCAGTGCTTTGGTCAGT	60984745	False	NA	NA	False	NA	NA	NA	60984763	61034135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61034018
WTC11_00024817	chr14	+	722	7	FSM	ENSG00000139974.16	ENST00000529212.1	722	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	38.1531999531713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCCTAGTTGCAAGAA	NA	False	NA	24	True	AATAAA	-36	NA	61043149	61052461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61043213_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
WTC11_00024818	chr14	+	755	7	FSM	ENSG00000139974.16	ENST00000526539.2	755	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.820657229211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGGCCTCAGGAGAA	NA	False	NA	-90	True	NA	NA	NA	61046106	61083633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61046168_61048150_61048298_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083549
WTC11_00024819	chr14	+	3819	14	FSM	ENSG00000027075.17	ENST00000332981.11	3720	14	-99	0	-99	0	multi-exon	FALSE	canonical	3	39	junction_7	5.77179430224741	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGTTTTGACTAGAAT	61321468	False	NA	10	True	AATAAA	-18	NA	61321479	61550976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61322465_61391224_61391289_61443110_61443262_61445691_61445727_61449163_61449253_61450841_61450972_61453225_61453354_61457175_61457320_61457505_61457680_61485501_61485657_61529074_61529214_61530406_61530596_61547742_61547887_61549684
WTC11_00024820	chr14	+	4052	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	-130	0	-103	0	multi-exon	FALSE	canonical	3	159	junction_1	166.390016993514	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	NA	False	NA	23	True	AATAAA	-19	NA	61695409	61748258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
WTC11_00024821	chr14	+	3946	15	FSM	ENSG00000100644.17	ENST00000337138.9	3946	15	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	88.17633654519	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61684326	True	NA	23	True	AATAAA	-19	NA	61695512	61748258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
WTC11_00024822	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	192.583402358317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61695766	False	NA	23	True	AATAAA	-19	NA	61695776	61748258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
WTC11_00024824	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	23.5172644751693	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	61758720	True	NA	15	True	AATAAA	-18	NA	61762419	61796428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
WTC11_00024825	chr14	+	14150	8	FSM	ENSG00000139973.18	ENST00000683842.1	14213	8	0	63	0	-63	multi-exon	FALSE	canonical	0	0	junction_1	1.29362644830535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAATTTTGTAAAACTG	61812690	False	NA	NA	False	NA	NA	NA	61812702	62112487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61812811_61970131_61970312_61995875_61996543_62069602_62069816_62075134_62075392_62080833_62081275_62084195_62084386_62100393
WTC11_00024826	chr14	+	1096	1	FSM	ENSG00000261242.1	ENST00000561909.1	1096	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCATTTCTCCTGT	63543451	True	NA	NA	False	AATAAA	-37	NA	63543568	63544664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_63543600_63544700
WTC11_00024827	chr14	+	306	1	FSM	ENSG00000258645.2	ENST00000554777.2	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTCACTATTGAAATG	NA	False	NA	NA	False	NA	NA	NA	63601508	63601814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_63601500_63601800
WTC11_00024828	chr14	+	300	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-5	19	-5	-19	multi-exon	FALSE	canonical	3	71	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTCTTGATACTTTAT	63641847	True	NA	12	True	AATGAA	-26	NA	63642055	63651489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_63642198_63651331
WTC11_00024829	chr14	+	2667	11	FSM	ENSG00000054654.20	ENST00000557060.1	3203	11	0	536	0	-536	multi-exon	FALSE	canonical	2	3	junction_9	1.9	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGGTGCACCGTA	64073974	True	NA	NA	False	NA	NA	NA	64073987	64099824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64074137_64075944_64076101_64078465_64078607_64080455_64080639_64081442_64081581_64087670_64087857_64089573_64089697_64090865_64091049_64093348_64093481_64097948_64098147_64098746
WTC11_00024831	chr14	+	8514	48	ISM	ENSG00000054654.20	ENST00000394768.6	11095	63	45337	0	1522	0	3prime_fragment	FALSE	canonical	3	11	junction_5	60.9156925059644	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	64120934	False	NA	11	True	ATTAAA	-15	NA	64120951	64226430	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_64121062_64122011_64122134_64122285_64122428_64125078_64125211_64126326_64126480_64126597_64126808_64128451_64128554_64129781_64129902_64130047_64130249_64132264_64132439_64134068_64134201_64137786_64137984_64139940_64140074_64141340_64141524_64141941_64142089_64143771_64143949_64146067_64146224_64152563_64152717_64158624_64158796_64159311_64159443_64162071_64162277_64163401_64163582_64165284_64165411_64167232_64167388_64167494_64167640_64168876_64168972_64170227_64170463_64174943_64175139_64177357_64177484_64186423_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
WTC11_00024832	chr14	+	4093	19	NIC	ENSG00000054654.20	novel	21842	116	NA	NA	-10418	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_17	28.1745551083873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	64185408	True	NA	13	True	ATTAAA	-17	NA	64186335	64226432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
WTC11_00024837	chr14	+	3064	9	FSM	ENSG00000054654.20	ENST00000441438.2	3084	9	20	0	20	0	multi-exon	FALSE	canonical	3	13	junction_4	60.7287771571271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	64215423	False	NA	11	True	ATTAAA	-15	NA	64215451	64226430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221533_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
WTC11_00024838	chr14	+	6800	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	14	0	14	0	multi-exon	TRUE	canonical	3	54	junction_26	286.402479349455	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	64387999	False	NA	15	True	AATAAA	-19	NA	64388044	64463457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
WTC11_00024839	chr14	+	2063	16	FSM	ENSG00000100714.17	ENST00000555709.7	2063	16	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_6	367.1111850955	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTATAACATTTATTTTA	64368293	True	NA	NA	False	GATAAA	-18	NA	64388310	64439581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095
WTC11_00024841	chr14	+	3174	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	-42	22	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	107.803433372567	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGGTGTTGCAATATG	64368293	True	NA	8	True	AATAAA	-16	NA	64388310	64460003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
WTC11_00024842	chr14	+	3966	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	-51	-833	0	833	multi-exon	FALSE	canonical	3	1297	junction_20	92.8941246796588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTGAATAGTGCAGAAAT	64368293	True	NA	NA	False	NA	NA	NA	64388310	64456006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
WTC11_00024845	chr14	+	2183	19	FSM	ENSG00000100714.17	ENST00000652509.1	2183	19	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_16	351.163972813939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGTGTTGCAATATGA	64424794	True	NA	9	True	AATAAA	-17	NA	64424843	64460004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64454722_64454876_64458213_64458308_64459758
WTC11_00024848	chr14	+	2907	2	FSM	ENSG00000179841.8	ENST00000394718.4	6487	2	37	3543	37	1253	multi-exon	FALSE	canonical	3	5	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATCTAGTGCAAATAT	64465015	True	NA	NA	False	NA	NA	NA	64465535	64470960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64465614_64468131
WTC11_00024849	chr14	+	3838	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	-196	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	64504562	False	NA	NA	False	AATAAA	-19	NA	64504573	64524951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64504947_64521486
WTC11_00024850	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	64537688	True	NA	10	True	AGTAAA	-19	NA	64540740	64543237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64540700_64543200
WTC11_00024851	chr14	+	5067	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	-88	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_14	14.6407971496251	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACTATGTGTGAACTC	64704324	False	NA	11	True	NA	NA	NA	64704335	64744339	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
WTC11_00024852	chr14	+	10526	17	FSM	ENSG00000126822.18	ENST00000247226.13	10526	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	16.6339261751398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCTGATACATAGTAA	64701490	True	NA	8	True	ATTAAA	-16	NA	64704423	64750249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64738741_64738856_64741035_64742456_64742981
WTC11_00024854	chr14	+	4702	17	FSM	ENSG00000126822.18	ENST00000471182.7	4702	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	15.0891879751695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGTGAACTCCTTC	NA	False	NA	15	True	NA	NA	NA	64727592	64744343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
WTC11_00024855	chr14	+	3045	4	FSM	ENSG00000126822.18	ENST00000484731.3	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	35.6495285928003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	64737977	False	NA	17	True	NA	NA	NA	64737990	64744345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64738138_64738741_64738856_64741035_64742456_64742981
WTC11_00024856	chr14	+	3588	4	FSM	ENSG00000258289.10	ENST00000607599.6	3615	4	45	-18	-9	18	multi-exon	FALSE	canonical	3	243	junction_2	704.653263827127	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTCCTGAGATATAAG	64901264	True	NA	34	True	AATAAA	-44	NA	64914405	64935386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64926006_64926081_64932137
WTC11_00024857	chr14	+	3514	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	-9	-3066	-9	18	multi-exon	FALSE	canonical	3	167	junction_2	848.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTCCTGAGATATAAG	64901264	True	NA	34	True	AATAAA	-44	NA	64914405	64935386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64932137
WTC11_00024858	chr14	+	1706	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	-71	-612	-9	77	multi-exon	FALSE	canonical	2	20	junction_3	791.714314355599	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTATGATTCTTATGGCT	64901264	True	NA	NA	False	NA	NA	NA	64914405	64944668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
WTC11_00024860	chr14	+	3540	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	-22	0	-10	0	multi-exon	FALSE	canonical	3	1462	junction_2	170.241005636128	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	64901291	True	NA	16	True	AATAAA	-26	NA	64914432	64935368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
WTC11_00024861	chr14	+	2732	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	-21	0	-21	0	multi-exon	FALSE	canonical	3	109	junction_10	12.4389417848655	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	64985254	True	NA	4	True	AATAAA	-15	NA	64986873	65062650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
WTC11_00024862	chr14	+	430	5	FSM	ENSG00000257365.8	ENST00000554210.5	575	5	145	0	145	0	multi-exon	FALSE	canonical	3	13	junction_4	55.3460703212071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTTCACTGAAGCC	NA	False	NA	NA	False	AATAGA	-5	NA	65012316	65032392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032358
WTC11_00024863	chr14	+	4968	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	198	0	198	0	multi-exon	TRUE	canonical	3	39	junction_1	16.4039629358274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	NA	False	NA	7	True	AATAAA	-16	NA	65410789	65744121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
WTC11_00024864	chr14	+	4323	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	-53	-21	-53	21	multi-exon	FALSE	canonical	3	50	junction_1	13.5262707351287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTATGAGTTATTTT	65412660	False	NA	28	True	AATAAA	-37	NA	65412676	65744142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
WTC11_00024865	chr14	+	3084	12	NIC	ENSG00000033170.17	novel	2664	11	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	34.3070722535685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGGAATTTTGTAAAG	65412989	False	NA	-4	True	AATAAA	-4	NA	65413007	65743132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65617089_65617192_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
WTC11_00024866	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	9.20923000882114	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	66506489	True	NA	23	True	AATAAA	-27	NA	66508146	67181803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
WTC11_00024869	chr14	+	2524	4	FSM	ENSG00000072415.10	ENST00000676950.1	2693	4	0	169	0	-169	multi-exon	FALSE	canonical	3	62	junction_2	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGAAAAAAGCACATAGT	67240205	True	NA	NA	False	NA	NA	NA	67241401	67294299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510
WTC11_00024870	chr14	+	5027	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	-21	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	19.3508160456517	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	67240205	True	NA	25	True	AATAAA	-33	NA	67241401	67335819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
WTC11_00024871	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	9.13867091662945	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	67240238	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
WTC11_00024873	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_3	157.908524281675	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	67347894	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
WTC11_00024875	chr14	+	5009	29	NNC	ENSG00000054690.14	novel	6615	29	NA	NA	-157	252	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	21.2260369088802	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCCTACACTCTGTCA	67532265	True	NA	NA	False	ACTAAA	-7	NA	67533132	67587933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_67533399_67541833_67541994_67555824_67555888_67557268_67557419_67559607_67559692_67561953_67562036_67562136_67562895_67569137_67569217_67569920_67570013_67571751_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579228_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
WTC11_00024876	chr14	+	6921	29	FSM	ENSG00000054690.14	ENST00000329153.10	6615	29	-385	79	-385	0	multi-exon	FALSE	canonical	3	24	junction_9	19.7743327243646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTGTGTTTTGGAAG	NA	False	NA	8	True	AATAAA	-22	NA	67532904	67589533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67533399_67541833_67541994_67555824_67555888_67557268_67557419_67559607_67559692_67561953_67562036_67562136_67562895_67569137_67569217_67569920_67570013_67571751_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579312_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
WTC11_00024879	chr14	+	6726	20	FSM	ENSG00000054690.14	ENST00000557971.5	5555	20	-1000	-171	324	0	multi-exon	FALSE	canonical	3	53	junction_1	12.1091526932056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCGTCTTTTGTAGGAC	67570052	False	NA	32	True	AATAAA	-35	NA	67570062	67589611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579312_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
WTC11_00024886	chr14	+	1961	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	-50	0	-50	0	multi-exon	FALSE	canonical	3	375	junction_5	43.7264222181509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	67616979	True	NA	10	True	AATAAA	-17	NA	67619869	67651708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
WTC11_00024887	chr14	+	1198	4	ISM	ENSG00000139988.10	ENST00000267502.3	1833	8	5221	0	-1101	0	3prime_fragment	FALSE	canonical	2	5	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTATTTATTTTCTC	67725982	False	NA	8	True	AATAAA	-16	NA	67726062	67734450	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_67726156_67726980_67727191_67729190_67729381_67733745
WTC11_00024889	chr14	+	332	1	FSM	ENSG00000258759.1	ENST00000557141.1	606	1	222	52	222	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCCAAAGGAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	67799225	67799557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67799200_67799600
WTC11_00024890	chr14	+	1530	11	FSM	ENSG00000182185.19	ENST00000471583.6	1559	11	29	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	18.4780951399218	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAGTAGGTGTAAAG	67818046	True	NA	NA	False	AATAAA	-16	NA	67819807	68478093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68477647
WTC11_00024891	chr14	+	1308	11	FSM	ENSG00000182185.19	ENST00000487861.5	1673	11	33	332	0	-332	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCCAGTGTAACCCAGC	67818050	True	NA	NA	False	NA	NA	NA	67819811	68611233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68611005
WTC11_00024892	chr14	+	618	5	FSM	ENSG00000182185.19	ENST00000478014.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	18.0190871022924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACAGTGCTCTTCAAA	67887090	True	NA	NA	False	AATAAA	-16	NA	67887101	68683171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68682936
WTC11_00024894	chr14	+	4927	9	FSM	ENSG00000081177.19	ENST00000409018.7	3252	9	-13	-1662	0	0	multi-exon	FALSE	canonical	3	14	junction_1	52.8961246217528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGTAGGCAGATGTTT	69189905	True	NA	NA	False	AATAAA	-19	NA	69191497	69244020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69191592_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
WTC11_00024895	chr14	+	546	4	FSM	ENSG00000081177.19	ENST00000487724.5	544	4	-2	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	43.0219582177391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGAGTCCTGTGACCC	69189938	True	NA	NA	False	NA	NA	NA	69191530	69209571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69191592_69203916_69204001_69208829_69209083_69209423
WTC11_00024896	chr14	+	3321	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	26	1662	-5	0	multi-exon	FALSE	canonical	3	96	junction_1	25.4606935015574	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCACTGGATGTAAAT	69189931	True	NA	15	True	AATAAA	-16	NA	69191523	69242356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
WTC11_00024899	chr14	+	5107	9	FSM	ENSG00000081177.19	ENST00000312994.9	5107	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.8677489319908	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGTAGGCAGATGTTT	69190173	False	NA	NA	False	AATAAA	-19	NA	69191765	69244020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
WTC11_00024903	chr14	+	522	3	FSM	ENSG00000100626.17	ENST00000554317.5	579	3	57	0	57	0	multi-exon	FALSE	canonical	2	2	junction_1	10.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCGGGACACCCGCCAT	69259655	False	NA	NA	False	NA	NA	NA	69259698	69320843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69259798_69260177_69260468_69320710
WTC11_00024904	chr14	+	3148	16	FSM	ENSG00000100626.17	ENST00000337827.8	5708	16	35	2525	35	42	multi-exon	FALSE	canonical	3	7	junction_5	5.10772834916745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCACACCCTCCCCCGC	69259979	False	NA	48	True	NA	NA	NA	69259998	69354508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030_69352171_69353331
WTC11_00024905	chr14	+	4108	15	FSM	ENSG00000100626.17	ENST00000448469.8	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	4.84294142362398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCACCAGCGCCTTCC	69259880	True	NA	6	True	AATAAA	-18	NA	69260157	69354466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030
WTC11_00024906	chr14	+	5216	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	-24	0	-22	0	multi-exon	FALSE	canonical	3	12	junction_2	49.4246901861812	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393669	True	NA	25	True	ATTAAA	-14	NA	69398667	69462381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
WTC11_00024907	chr14	+	2087	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	10	junction_6	41.1042036239063	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	69393669	True	NA	32	True	ATTAAA	-21	NA	69398667	69462388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
WTC11_00024908	chr14	+	2377	8	FSM	ENSG00000029364.12	ENST00000555840.5	2377	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	43.0969481376061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393739	False	NA	25	True	ATTAAA	-14	NA	69398737	69462381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362_69458730_69461696
WTC11_00024909	chr14	+	5414	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	-24	9	-22	0	multi-exon	FALSE	canonical	3	108	junction_3	15.2825245151302	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393669	True	NA	25	True	ATTAAA	-14	NA	69398667	69462381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
WTC11_00024910	chr14	+	4620	6	FSM	ENSG00000029364.12	ENST00000557046.1	855	6	30	-3795	30	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5378643060033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	69399387	False	NA	32	True	ATTAAA	-21	NA	69399399	69462388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69454811_69454898_69455731_69455867_69458362
WTC11_00024913	chr14	+	632	6	FSM	ENSG00000100650.16	ENST00000553369.5	613	6	-19	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	659.3014485044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCAGTCAGCTCC	69727479	True	NA	88	True	NA	NA	NA	69767092	69769594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510
WTC11_00024914	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	525.176122061612	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	69727479	True	NA	5	True	NA	NA	NA	69767092	69771973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
WTC11_00024915	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	193.226913239331	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	69727479	True	NA	19	True	AATAAA	-14	NA	69767092	69772004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
WTC11_00024916	chr14	+	1496	8	FSM	ENSG00000100650.16	ENST00000557154.6	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	168.880950702571	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727528	True	NA	20	True	AATAAA	-15	NA	69767141	69772005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
WTC11_00024918	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	566.304810935673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	69727558	True	NA	-12	True	NA	NA	NA	69767171	69771642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
WTC11_00024920	chr14	+	1492	8	NIC	ENSG00000100650.16	novel	1496	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	421	junction_1	431.965229137339	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727528	True	NA	20	True	AATAAA	-15	NA	69767141	69772005	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_69767252_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
WTC11_00024921	chr14	+	1873	7	FSM	ENSG00000100650.16	ENST00000556587.5	1863	7	-10	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	691.978082504545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727558	True	NA	20	True	AATAAA	-15	NA	69767171	69772005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69769252_69770466_69770541_69770994_69771106_69771196
WTC11_00024927	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	70639316	True	NA	20	True	CATAAA	-20	NA	70641915	70675366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70642536_70667563_70667747_70671075
WTC11_00024928	chr14	+	5230	4	NNC	ENSG00000133985.3	novel	5094	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	119.063941738136	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	70639316	True	NA	20	True	CATAAA	-20	NA	70641915	70675366	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_70642536_70650054_70650191_70667563_70667747_70671075
WTC11_00024929	chr14	+	1453	2	NIC	ENSG00000259153.3	novel	537	3	NA	NA	-12	106	intron_retention	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGTGGAGCATGGGTA	70809670	False	NA	NA	False	TATAAA	-24	NA	70809828	70816100	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_70810292_70815110
WTC11_00024930	chr14	+	1063	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	-51	7	0	-7	multi-exon	FALSE	canonical	3	49	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	70809732	False	NA	NA	False	AATAAA	-17	NA	70809890	70815389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70810675_70815110
WTC11_00024931	chr14	+	12831	34	NIC	ENSG00000100731.16	novel	12865	36	NA	NA	-230	0	intron_retention	FALSE	canonical	3	25	junction_6	21.4129025751815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCCATTTTTTGTCA	NA	False	NA	24	True	AATAAA	-17	NA	70907174	71115382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_70908004_70946914_70947124_70962225_70962332_70968197_70968244_70969020_70969111_70976941_70978649_71009633_71009725_71011491_71011550_71012984_71013203_71019008_71019163_71023199_71023233_71026116_71026289_71026771_71026883_71028699_71028792_71033428_71033539_71033930_71034037_71036064_71036158_71045132_71045284_71046963_71047106_71047806_71047985_71050651_71050761_71051882_71052013_71055503_71055563_71057508_71057725_71073544_71073799_71076188_71076420_71088329_71088431_71089191_71089343_71101989_71102221_71103394_71103670_71105234_71105441_71108603_71109047_71109451_71109593_71109794
WTC11_00024932	chr14	+	3142	10	FSM	ENSG00000100731.16	ENST00000554879.5	4431	10	0	1289	0	-1289	multi-exon	FALSE	canonical	1	1	junction_8	19.7602918956798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTTTCTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	70907404	71011549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70908004_70946914_70947124_70962225_70962332_70968197_70968244_70969020_70969111_70976941_70978649_70988566_70988700_70995740_70995844_71009633_71009725_71011491
WTC11_00024933	chr14	+	13674	36	FSM	ENSG00000100731.16	ENST00000304743.7	12865	36	-809	0	-755	0	multi-exon	FALSE	canonical	3	25	junction_8	22.3280550164211	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCCATTTTTTGTCA	NA	False	NA	24	True	AATAAA	-17	NA	70906649	71115382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70908004_70946914_70947124_70962225_70962332_70968197_70968244_70969020_70969111_70976941_70978649_70988566_70988700_70995740_70995926_71009633_71009725_71011491_71011550_71012984_71013203_71019008_71019163_71023199_71023233_71026116_71026289_71026771_71026883_71028699_71028792_71033428_71033539_71033930_71034037_71036064_71036158_71045132_71045284_71046963_71047106_71047806_71047985_71050651_71050761_71051882_71052013_71055503_71055563_71057508_71057725_71073544_71073799_71076188_71076420_71088329_71088431_71089191_71089343_71101989_71102221_71103394_71103670_71105234_71105441_71108603_71109047_71109451_71109593_71109794
WTC11_00024934	chr14	+	6880	24	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	-58	0	intron_retention	FALSE	canonical	3	61	junction_2	59.7221670745094	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAACAGTAAAATA	71320380	False	NA	-21	True	AGTAAA	-4	NA	71320390	71739367	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_71321182_71413947_71414015_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
WTC11_00024936	chr14	+	552	7	FSM	ENSG00000197555.10	ENST00000554362.5	552	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	76.6768109230772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATTTTTCAGTGCTTT	71317133	True	NA	NA	False	AAGAAA	-27	NA	71320475	71587694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71320504_71321121_71321182_71400793_71400919_71512742_71512846_71529311_71529371_71576534_71576588_71587570
WTC11_00024937	chr14	+	6725	23	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_1	47.4043839727373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAACAGTAAAATA	71317133	True	NA	-21	True	AGTAAA	-4	NA	71320475	71739367	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738243_71738326_71739017
WTC11_00024938	chr14	+	7952	24	FSM	ENSG00000197555.10	ENST00000381232.8	7952	24	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	52.1143137854011	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	71317133	True	NA	6	True	AATAAA	-18	NA	71320475	71741209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
WTC11_00024941	chr14	+	7811	22	FSM	ENSG00000197555.10	ENST00000555818.5	7831	22	0	20	0	0	multi-exon	FALSE	canonical	2	5	junction_13	74.9659635542022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	71529311	True	NA	6	True	AATAAA	-18	NA	71529324	71741209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71704720_71704784_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
WTC11_00024944	chr14	+	2481	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	-7	0	6	0	multi-exon	FALSE	canonical	3	36	junction_9	11.800611758287	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	72924410	True	NA	70	True	NA	NA	NA	72926456	72959703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
WTC11_00024946	chr14	+	2429	14	NIC	ENSG00000119599.17	novel	2474	14	NA	NA	2	13	intron_retention	FALSE	canonical	3	31	junction_9	12.7872902876023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCACTTCTGTGAATGAC	72924419	True	NA	24	True	AATAAA	-25	NA	72926465	72959657	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
WTC11_00024951	chr14	+	6871	17	FSM	ENSG00000119707.14	ENST00000532683.5	6848	17	-23	0	-13	0	multi-exon	TRUE	canonical	3	262	junction_6	129.428491357197	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAATTGCACTTAA	73050966	True	NA	15	True	ATTAAA	-16	NA	73058518	73120129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
WTC11_00024952	chr14	+	6828	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	-15	0	-13	0	multi-exon	FALSE	canonical	3	228	junction_9	132.262178836647	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	73050966	True	NA	28	True	AATAAA	-38	NA	73058518	73123899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
WTC11_00024956	chr14	+	5645	6	FSM	ENSG00000119707.14	ENST00000527449.1	3469	6	410	-2586	410	0	multi-exon	FALSE	canonical	3	570	junction_1	40.0269908936458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	73107678	False	NA	28	True	AATAAA	-38	NA	73107711	73123899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
WTC11_00024958	chr14	+	581	4	FSM	ENSG00000080815.19	ENST00000557293.5	576	4	-5	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_1	105.965403159081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTCAGTCAGCTTTTAT	73131729	True	NA	NA	False	NA	NA	NA	73136431	73171007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136580_73147794_73147877_73147966_73148107_73170796
WTC11_00024959	chr14	+	729	5	FSM	ENSG00000080815.19	ENST00000553719.5	712	5	-17	0	-8	0	multi-exon	FALSE	canonical	3	22	junction_1	102.142975774157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATAAATACAGGTG	73131724	True	NA	NA	False	NA	NA	NA	73136426	73173680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136580_73147794_73147877_73147966_73148095_73170796_73171048_73173565
WTC11_00024960	chr14	+	2796	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	-20	0	-8	0	multi-exon	FALSE	canonical	3	164	junction_3	32.4218067621009	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73131724	True	NA	12	True	ATTAAA	-25	NA	73136426	73220401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
WTC11_00024962	chr14	+	6098	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	-80	0	-8	0	multi-exon	FALSE	canonical	3	119	junction_3	44.2225775327079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	73131724	True	NA	7	True	AATAAA	-16	NA	73136426	73223691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
WTC11_00024964	chr14	+	3073	8	FSM	ENSG00000100767.17	ENST00000555700.1	4668	8	1595	0	1145	0	multi-exon	FALSE	canonical	3	14	junction_1	5.70356136505061	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAGTTTAATTAAACCA	NA	False	NA	11	True	AATAAA	-17	NA	73263644	73274623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
WTC11_00024965	chr14	+	2462	1	FSM	ENSG00000170468.8	ENST00000304061.8	2462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTCCTAAGGCTAGAT	73488476	True	NA	23	True	ATTAAA	-16	NA	73490932	73493394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73490900_73493400
WTC11_00024966	chr14	+	1706	3	FSM	ENSG00000184227.8	ENST00000311148.9	1686	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	10	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	73537082	True	NA	6	True	ATTAAA	-17	NA	73537122	73543796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73537879_73541492_73541696_73543049
WTC11_00024967	chr14	+	2859	3	FSM	ENSG00000119673.16	ENST00000238651.10	1622	3	-1234	-3	359	0	multi-exon	FALSE	canonical	3	61	junction_1	30.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTTAAGATTTTTAT	NA	False	NA	17	True	ATTAAA	-20	NA	73567978	73575658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73569884_73573387_73573591_73574907
WTC11_00024968	chr14	+	1050	3	ISM	ENSG00000119673.16	ENST00000538782.2	1578	4	1678	-2	13	0	3prime_fragment	FALSE	canonical	3	51	junction_1	35.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	73568133	True	NA	14	True	ATTAAA	-17	NA	73569297	73575655	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_73569397_73573387_73573591_73574907
WTC11_00024969	chr14	+	723	1	FSM	ENSG00000279026.1	ENST00000623547.1	2225	1	1503	-1	1503	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCGCTGTGTGTCTC	NA	False	NA	3	True	AATAAA	-16	NA	73582196	73582919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73582200_73582900
WTC11_00024970	chr14	+	1465	3	FSM	ENSG00000177465.5	ENST00000326303.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTATTTTACGTAACTT	73591709	True	NA	6	True	ATTAAA	-20	NA	73591872	73595766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73592417_73593701_73593905_73595048
WTC11_00024971	chr14	+	632	8	FSM	ENSG00000119661.15	ENST00000555631.6	627	8	-5	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	23.0155227121672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATTCTGAGCTGGC	73643738	True	NA	NA	False	AAAAAG	-8	NA	73644985	73689515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374
WTC11_00024972	chr14	+	8416	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	1	0	1	0	multi-exon	FALSE	canonical	3	37	junction_1	12.328828005938	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	73643739	True	NA	11	True	AATAAA	-22	NA	73644986	73703732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
WTC11_00024974	chr14	+	1456	9	NIC	ENSG00000140043.12	novel	2543	10	NA	NA	2	-11	combination_of_known_splicesites	TRUE	canonical	3	9	junction_5	74.4408322092116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTAAAGATTTGTTGAA	73848823	True	NA	8	True	AATAAA	-20	NA	73851832	73884568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73880054_73880177_73881204_73881293_73882398_73882439_73884100
WTC11_00024975	chr14	+	2771	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	147	junction_1	23.5282861023403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	73848815	True	NA	NA	False	AGTAAA	-15	NA	73851824	73885726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
WTC11_00024976	chr14	+	2562	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	-19	0	-6	0	multi-exon	FALSE	canonical	3	58	junction_1	46.2147429846343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	73848815	True	NA	4	True	AGTAAA	-14	NA	73851824	73885456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
WTC11_00024978	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	54.9702500909513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	73848937	True	NA	7	True	AGTAAA	-17	NA	73851946	73885459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
WTC11_00024979	chr14	+	1964	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	-3	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5108302702508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	73886751	False	NA	NA	False	NA	NA	NA	73886804	73931840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
WTC11_00024980	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	40.1327796196575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73886751	False	NA	11	True	AATAAA	-17	NA	73886804	73932278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
WTC11_00024982	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	28.7163385405165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	73884241	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
WTC11_00024986	chr14	+	1597	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	-50	562	0	0	multi-exon	FALSE	canonical	3	79	junction_5	8.65500380757229	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	73949127	True	NA	NA	False	AATAAA	-14	NA	73950251	73963108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
WTC11_00024991	chr14	+	2776	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-160	258	-160	-258	multi-exon	FALSE	canonical	3	93	junction_1	16.2406896405294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTGAGTTTTTCCTCA	NA	False	NA	16	True	AATAAA	-16	NA	74084795	74201235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
WTC11_00024992	chr14	+	271	4	FSM	ENSG00000205659.12	ENST00000554289.1	271	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	58.4864656708427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATGCTAGTTACCA	74082478	False	NA	NA	False	NA	NA	NA	74085504	74097860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74085602_74091237_74091307_74095947_74095986_74097793
WTC11_00024993	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	74336707	True	NA	25	True	AATAAA	-18	NA	74348470	74360008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74348653_74356782
WTC11_00024997	chr14	+	574	6	FSM	ENSG00000119616.11	ENST00000554590.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	84.4559056549629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTATCAGTTCATAACT	74705752	True	NA	NA	False	NA	NA	NA	74713143	74732817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74713201_74713484_74713621_74714871_74714944_74715950_74716100_74723271_74723345_74732730
WTC11_00024998	chr14	+	595	8	FSM	ENSG00000119616.11	ENST00000556814.5	571	8	-24	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	74.4920212136159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCGATTCTAATTCTTAC	74705752	True	NA	NA	False	NA	NA	NA	74713143	74734917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74713201_74713484_74713553_74714871_74714944_74715993_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
WTC11_00025004	chr14	+	8213	21	FSM	ENSG00000119596.18	ENST00000325680.12	8195	21	-18	0	-18	0	multi-exon	FALSE	canonical	3	155	junction_1	53.1359341688842	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATTTTCATTGCTTA	74757016	True	NA	NA	False	ATTAAA	-27	NA	74763297	74837318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
WTC11_00025005	chr14	+	4899	20	FSM	ENSG00000119596.18	ENST00000552421.5	4899	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	74.5636243219317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	74757084	True	NA	35	True	AATAAA	-42	NA	74763365	74836190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
WTC11_00025006	chr14	+	5500	17	FSM	ENSG00000119596.18	ENST00000549293.5	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	75.0549538255137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	74781372	False	NA	35	True	AATAAA	-42	NA	74781384	74836190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74829212_74829344_74835264_74835448_74835774
WTC11_00025007	chr14	+	2316	11	FSM	ENSG00000119596.18	ENST00000547879.5	2316	11	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	24.8201531018646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATTTGAGTCTCAGTAT	74809621	False	NA	5	True	ATTAAA	-20	NA	74809631	74822115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056
WTC11_00025012	chr14	+	4308	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	283	junction_4	13.7914495841682	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	75002901	False	NA	NA	False	AATAAA	-16	NA	75002916	75012366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
WTC11_00025013	chr14	+	1094	2	FSM	ENSG00000119718.11	ENST00000553539.1	1094	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGCTCATGCCTGTA	74997911	True	NA	NA	False	CATAAA	-28	NA	75002971	75005102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75003700_75004736
WTC11_00025014	chr14	+	961	3	FSM	ENSG00000119718.11	ENST00000556668.1	1011	3	50	0	50	0	multi-exon	FALSE	canonical	3	285	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAATAAAAGCCACTTGA	75006340	False	NA	-22	True	NA	NA	NA	75006353	75009563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75006715_75007721_75007789_75009030
WTC11_00025020	chr14	+	2461	2	FSM	ENSG00000170345.10	ENST00000555347.1	1280	2	-480	-701	43	58	multi-exon	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGTTTGTCAAGAAGG	75279684	False	NA	68	True	NA	NA	NA	75279712	75282288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75280668_75280782
WTC11_00025039	chr14	+	825	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	-10	1	0	0	multi-exon	FALSE	canonical	3	228	junction_4	30.4094454898474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	75983087	True	NA	8	True	AATAAA	-17	NA	75985752	76083741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
WTC11_00025045	chr14	+	2462	10	FSM	ENSG00000089916.18	ENST00000312858.9	2438	10	-24	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_6	55.1901315208068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGCGTGTTTATGAT	76146183	True	NA	11	True	AGTAAA	-22	NA	76151910	76202788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177891_76177932_76180763_76180850_76195877_76195973_76201690
WTC11_00025046	chr14	+	14038	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	-17	0	-11	0	multi-exon	FALSE	canonical	3	78	junction_9	23.6068623628233	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	76146177	True	NA	-4	True	NA	NA	NA	76151904	76214343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
WTC11_00025056	chr14	+	614	4	FSM	ENSG00000100577.19	ENST00000553838.5	1132	4	1	517	1	-5	multi-exon	FALSE	canonical	3	138	junction_3	11.5854314646552	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGAAGCAGGGGGGAA	77316602	True	NA	NA	False	AAAAAG	-18	NA	77320999	77327781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471
WTC11_00025058	chr14	+	1197	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	-11	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	14.6708682428819	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	77316627	True	NA	22	True	ATTAAA	-19	NA	77321024	77331597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
WTC11_00025062	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_7	69.1997787207445	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	77447619	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
WTC11_00025067	chr14	+	463	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	-18	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8267.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	77571052	True	NA	NA	False	ATTAAA	-13	NA	77708102	77712038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77711740
WTC11_00025068	chr14	+	1082	4	FSM	ENSG00000119705.10	ENST00000557342.6	376	4	0	-706	0	706	multi-exon	FALSE	canonical	3	14327	junction_3	952.259185072822	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGAACTACTTTGCTT	77571052	True	NA	NA	False	NA	NA	NA	77708102	77718304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717495
WTC11_00025074	chr14	+	1212	4	NIC	ENSG00000063761.16	novel	1972	10	NA	NA	-407	-15	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	21.6024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTCAAGGTTGCAGGA	NA	False	NA	0	True	AATAAA	-2	NA	77907769	77933937	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_77907920_77924456_77924607_77931517_77931712_77933219
WTC11_00025076	chr14	+	253	1	FSM	ENSG00000258501.1	ENST00000554099.1	1658	1	188	1217	188	-1217	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGTTTGAATCCTATTA	NA	False	NA	NA	False	NA	NA	NA	81916418	81916671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_81916400_81916700
WTC11_00025082	chr14	+	664	5	FSM	ENSG00000100722.20	ENST00000554602.5	652	5	-12	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	276.850591474896	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGGCATGAAGCTGCA	88552828	True	NA	NA	False	NA	NA	NA	88562969	88572113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88567857_88568154_88571083_88571125_88572029
WTC11_00025083	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	166.512859996995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	88552828	True	NA	NA	False	NA	NA	NA	88562969	88612407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
WTC11_00025084	chr14	+	4101	17	NIC	ENSG00000100722.20	novel	18153	17	NA	NA	0	568	combination_of_known_junctions	FALSE	canonical	3	243	junction_14	126.569891759454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGAGTTTAATCTTTC	88552895	True	NA	NA	False	ACTAAA	-45	NA	88563036	88613547	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
WTC11_00025085	chr14	+	6433	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	-4358	0	842	multi-exon	FALSE	canonical	3	156	junction_10	139.927751036755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAACAATGACAGACA	88552868	True	NA	NA	False	NA	NA	NA	88563009	88616242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
WTC11_00025086	chr14	+	2530	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	-1	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	168.697850738384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	88552895	True	NA	NA	False	NA	NA	NA	88563036	88611991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
WTC11_00025087	chr14	+	17861	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	292	0	-292	multi-exon	FALSE	canonical	3	336	junction_10	113.812328390865	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGCCATTATCATTAGAA	88552895	True	NA	NA	False	NA	NA	NA	88563036	88627304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
WTC11_00025088	chr14	+	2070	15	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	152.233591321136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	88552870	True	NA	30	True	AATATA	-32	NA	88563011	88611884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
WTC11_00025089	chr14	+	3805	14	NIC	ENSG00000100722.20	novel	2195	16	NA	NA	0	738	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGGCATGCATTTT	88552896	True	NA	NA	False	NA	NA	NA	88563037	88613717	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
WTC11_00025090	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	161.676989361161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	88552992	False	NA	-44	True	NA	NA	NA	88563133	88611810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
WTC11_00025094	chr14	+	3178	1	FSM	ENSG00000278576.1	ENST00000617439.1	3178	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1521	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCACTTAGCATTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	88589230	88592408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88589200_88592400
WTC11_00025096	chr14	+	2724	3	FSM	ENSG00000100722.20	ENST00000557491.1	2724	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	88608393	False	NA	22	True	AATAAA	-35	NA	88608421	88612979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88609804_88610833_88610941_88611744
WTC11_00025097	chr14	+	5125	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	14	131	-13	-131	multi-exon	FALSE	canonical	3	14	junction_4	15.7772962488215	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAGAGAACAAAGATTT	88823571	True	NA	NA	False	AATGAA	-32	NA	88824637	88880947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
WTC11_00025098	chr14	+	2076	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	-18	0	-13	0	multi-exon	FALSE	canonical	3	41	junction_4	9.14201229975594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823571	True	NA	16	True	AATAAA	-19	NA	88824637	88877988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
WTC11_00025101	chr14	+	228	1	FSM	ENSG00000230997.5	ENST00000555078.2	316	1	-94	182	-94	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTTAAAAACAACTGCAA	NA	False	NA	NA	False	NA	NA	NA	89892033	89892261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89892000_89892300
WTC11_00025102	chr14	+	912	7	FSM	ENSG00000042088.14	ENST00000554180.5	910	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	187	junction_1	116.504172552841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCAACCTCATCCATG	89950068	True	NA	NA	False	NA	NA	NA	89955904	89980587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539
WTC11_00025103	chr14	+	2367	18	FSM	ENSG00000042088.14	ENST00000393452.7	2370	18	3	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_16	178.163351817358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATATGTTTTGG	89950068	True	NA	4	True	AATAAA	-16	NA	89955904	90043341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90023031_90023078_90033105_90033215_90043069
WTC11_00025104	chr14	+	3744	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	-22	0	-2	0	multi-exon	FALSE	canonical	3	90	junction_1	118.580141676421	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950068	True	NA	18	True	AATAAA	-18	NA	89955904	90044764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
WTC11_00025106	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	79.1773255982348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	89950101	True	NA	7	True	AATAAA	-19	NA	89955937	90043344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
WTC11_00025110	chr14	+	3920	17	NIC	ENSG00000042088.14	novel	2488	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	129.276774306137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950200	True	NA	18	True	AATAAA	-18	NA	89956036	90044764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_89956279_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
WTC11_00025111	chr14	+	3796	16	NIC	ENSG00000042088.14	novel	2068	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	96.7470929795826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950101	True	NA	18	True	AATAAA	-18	NA	89955937	90044764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_89956279_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
WTC11_00025113	chr14	+	2207	15	FSM	ENSG00000042088.14	ENST00000555178.5	2200	15	-7	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	136.504167537486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAATAAAGTATTAGTT	89956540	True	NA	-22	True	NA	NA	NA	89956564	90043315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
WTC11_00025114	chr14	+	1891	14	FSM	ENSG00000042088.14	ENST00000555880.5	1894	14	3	0	3	0	multi-exon	FALSE	canonical	3	18	junction_13	126.872763920599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATTCCTAATAAAGTA	89963083	False	NA	-28	True	NA	NA	NA	89963107	90043309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90043069
WTC11_00025117	chr14	+	2246	3	FSM	ENSG00000100764.14	ENST00000555787.1	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	1652	junction_1	159.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGTTTCTGCAGTCT	90267464	False	NA	NA	False	AATAAA	-19	NA	90267475	90272624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90268414_90269396_90270353_90272272
WTC11_00025129	chr14	+	414	1	FSM	ENSG00000213315.5	ENST00000472287.1	459	1	97	-52	97	52	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGGAAGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	90766627	90767041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90766600_90767000
WTC11_00025140	chr14	+	13027	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	-24	0	-24	0	multi-exon	FALSE	canonical	0	0	junction_1	65.593495612497	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	92117898	True	NA	1	True	AATAAA	-16	NA	92121944	92172145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
WTC11_00025147	chr14	+	907	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	2	0	2	0	multi-exon	FALSE	canonical	3	162	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	93183360	True	NA	7	True	CATAAA	-18	NA	93184952	93187086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_93185033_93186259
WTC11_00025148	chr14	+	2342	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	31	0	-31	multi-exon	FALSE	canonical	3	165	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGTACTAATACAAATAAC	93183724	False	NA	NA	False	NA	NA	NA	93185316	93188432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_93185486_93186259
WTC11_00025153	chr14	+	3909	6	FSM	ENSG00000089723.10	ENST00000203664.10	3911	6	2	0	2	0	multi-exon	FALSE	canonical	3	20	junction_4	3.54400902933387	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGTCCTGGCTTCT	NA	False	NA	5	True	ATTAAA	-14	NA	94026341	94048930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_94026541_94037379_94037476_94038962_94039082_94043970_94044056_94044585_94044781_94045715
WTC11_00025156	chr14	+	571	4	FSM	ENSG00000165948.11	ENST00000554562.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	69.8188131284589	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94096906	94102709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_94096966_94100738_94100772_94101813_94102060_94102476
WTC11_00025157	chr14	+	3868	25	FSM	ENSG00000119698.12	ENST00000304338.8	3857	25	-11	0	-1	0	multi-exon	FALSE	canonical	2	15	junction_15	4.66592255972314	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGTGTTTGTGAAAAAA	NA	False	NA	28	True	AATAAA	-17	NA	94174310	94279734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_94174583_94176053_94176128_94208463_94208567_94230586_94230735_94231241_94231316_94233652_94233760_94234561_94234670_94237564_94237687_94240672_94240796_94241787_94241958_94242288_94242409_94244634_94244713_94245586_94245671_94246356_94246540_94250171_94250278_94251748_94251897_94256459_94256605_94258782_94258825_94259294_94259370_94264877_94264948_94265386_94265474_94265793_94265888_94266958_94267030_94275373_94275522_94278618
WTC11_00025166	chr14	+	3751	2	FSM	ENSG00000250366.4	ENST00000503525.2	3197	2	-563	9	-183	0	multi-exon	FALSE	canonical	3	304	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACTCGATGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	95876208	95925562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_95877178_95922780
WTC11_00025167	chr14	+	3467	3	FSM	ENSG00000250366.4	ENST00000678517.1	3373	3	-186	92	-148	0	multi-exon	FALSE	canonical	3	93	junction_1	105.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	95875896	True	NA	20	True	AATAAA	-27	NA	95876243	95925571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_95876602_95876859_95877178_95922780
WTC11_00025168	chr14	+	7638	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	48	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	96038575	True	NA	95	True	TTTAAA	-21	NA	96039350	96093971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96039528_96086510
WTC11_00025169	chr14	+	2138	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	2	-1380	2	4	multi-exon	FALSE	canonical	3	319	junction_1	53.8227543785051	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCCATTTTTTAATTC	96359841	True	NA	13	True	GATAAA	-18	NA	96363527	96387292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
WTC11_00025170	chr14	+	1363	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	-18	0	-13	0	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCATCCCCTCCAGAC	96391596	True	NA	NA	False	AATAAA	-16	NA	96392114	96399292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96392260_96398074
WTC11_00025173	chr14	+	4521	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	-6	0	0	0	multi-exon	TRUE	canonical	3	1069	junction_12	501.608379103055	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	96471601	True	NA	18	True	AATAAA	-21	NA	96502375	96567116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
WTC11_00025175	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	96.8836286479816	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	96471626	True	NA	NA	False	AATAAA	-9	NA	96502400	96534885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
WTC11_00025176	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	101.167764958344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	96471666	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
WTC11_00025180	chr14	+	892	6	FSM	ENSG00000090060.19	ENST00000553461.1	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	1208	junction_5	413.505308309337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTATTTTTTATTTT	96527372	True	NA	NA	False	AATAAA	-13	NA	96527441	96534889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490
WTC11_00025189	chr14	+	971	6	FSM	ENSG00000100749.9	ENST00000555351.2	968	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	949	junction_5	84.2363342032403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTAGTTAACATTCTAC	96789094	True	NA	NA	False	NA	NA	NA	96797327	96853302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830
WTC11_00025191	chr14	+	1714	13	FSM	ENSG00000100749.9	ENST00000681195.1	1697	13	-17	0	-3	0	multi-exon	FALSE	canonical	3	63	junction_11	287.080224946888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTGTGGCTGTAAG	96789094	True	NA	12	True	AATAAA	-27	NA	96797327	96881609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876032_96876121_96881176
WTC11_00025192	chr14	+	1792	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	24	0	-3	0	multi-exon	FALSE	canonical	3	39	junction_12	384.655121024246	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	96789094	True	NA	15	True	AATAAA	-30	NA	96797327	96881612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
WTC11_00025193	chr14	+	5085	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	-19	1390	-3	-1390	multi-exon	FALSE	canonical	3	21	junction_8	317.940947789038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTATATGTTTGTTA	96789094	True	NA	NA	False	TATAAA	-44	NA	96797327	96885098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
WTC11_00025195	chr14	+	1215	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	-17	4	0	-4	multi-exon	FALSE	canonical	3	21	junction_8	343.595297399516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTTAGTAGCAAGTT	96789134	True	NA	NA	False	AATAAA	-14	NA	96797367	96860918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
WTC11_00025199	chr14	+	1677	13	FSM	ENSG00000100749.9	ENST00000216639.8	1663	13	-14	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	83.1379375896869	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTGTGGCTGTAAG	96789134	True	NA	12	True	AATAAA	-27	NA	96797367	96881609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
WTC11_00025200	chr14	+	1673	13	FSM	ENSG00000100749.9	ENST00000679727.1	1673	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	283.384995290075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTGGCTGTAAGGT	96789134	True	NA	14	True	AATAAA	-29	NA	96797367	96881611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
WTC11_00025201	chr14	+	1625	13	FSM	ENSG00000100749.9	ENST00000681493.1	1625	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	310.149650258638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACACACAGTATGTTGTG	96789172	True	NA	4	True	AATAAA	-19	NA	96797405	96881601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855351_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
WTC11_00025202	chr14	+	1511	11	FSM	ENSG00000100749.9	ENST00000680851.1	1511	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	328.944128994576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGCTGTAAGGTTTG	96833428	True	NA	17	True	AATAAA	-32	NA	96833466	96881614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96881176
WTC11_00025203	chr14	+	11198	2	FSM	ENSG00000100749.9	ENST00000555067.2	11646	2	448	0	448	0	multi-exon	FALSE	canonical	3	1007	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTGTGGCTGTAAG	96865317	False	NA	12	True	AATAAA	-27	NA	96865355	96881609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96876121_96881176
WTC11_00025205	chr14	+	1078	3	FSM	ENSG00000246084.6	ENST00000499910.3	1157	3	79	0	49	0	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATAGTGGATTTCCTA	97458870	False	NA	NA	False	AATAAA	-16	NA	97458906	97464159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_97458928_97461803_97462333_97463631
WTC11_00025207	chr14	+	3524	11	FSM	ENSG00000090061.17	ENST00000389879.9	3524	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	6.00333240792145	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGTATGTATCTTGTT	99474729	True	NA	NA	False	AAGAAA	-10	NA	99481408	99512440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_99481480_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206_99502377_99502718_99502985_99503610_99503645_99507075_99507148_99510156
WTC11_00025214	chr14	+	2399	14	FSM	ENSG00000196405.13	ENST00000402714.6	2353	14	-46	0	-46	0	multi-exon	FALSE	canonical	3	88	junction_1	21.1609778188183	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGCTCAGGCCCTCG	99970431	True	NA	13	True	AATAAA	-17	NA	99971402	100144236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_99972058_100084686_100084856_100097480_100097659_100123538_100123603_100126706_100126772_100128518_100128749_100129562_100129685_100132718_100132780_100135904_100135969_100137577_100137645_100137739_100137803_100141179_100141247_100141735_100141794_100143700
WTC11_00025218	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	19.1702895126808	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	100236209	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
WTC11_00025219	chr14	+	7855	1	FSM	ENSG00000100811.14	ENST00000623799.1	2742	1	-791	-4322	-791	4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGTTCTTGTTTGT	100274926	False	NA	23	True	AATAAA	-23	NA	100274937	100282792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100274900_100282800
WTC11_00025221	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	42.9138672226123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	100376404	False	NA	NA	False	NA	NA	NA	100376417	100529855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
WTC11_00025223	chr14	+	1944	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	-53	32	-1	0	multi-exon	FALSE	canonical	3	30	junction_1	32.5802428201851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGCTGTTTGTTAAG	100374919	True	NA	4	True	AATAAA	-4	NA	100376431	100530271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
WTC11_00025224	chr14	+	2132	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	-9	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.9282949202249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374972	True	NA	36	True	AATAAA	-36	NA	100376484	100530303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
WTC11_00025227	chr14	+	4504	3	FSM	ENSG00000214548.18	ENST00000452120.7	4504	3	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	69	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTGCAACCTCTGCC	100825995	True	NA	NA	False	NA	NA	NA	100826117	100833328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033
WTC11_00025231	chr14	+	12998	7	FSM	ENSG00000214548.18	ENST00000522771.9	12998	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	553.650511504224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTTTTTCCTTCCT	100825995	True	NA	NA	False	AGTAAA	-19	NA	100826117	100857624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100845875
WTC11_00025232	chr14	+	7758	6	NIC	ENSG00000214548.18	novel	1760	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	714	junction_3	285.306852353742	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTCTCAATAAATGTG	100825995	True	NA	NA	False	NA	NA	NA	100826117	100860987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00025233	chr14	+	1434	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	-8	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	478.10668265566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	100825995	True	NA	NA	False	NA	NA	NA	100826117	100860989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
WTC11_00025234	chr14	+	5003	7	NIC	ENSG00000214548.18	novel	1674	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	189	junction_3	444.340335028605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATAAATGTGTTTCCTG	100825995	True	NA	NA	False	NA	NA	NA	100826117	100860994	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100832511_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00025237	chr14	+	1598	7	FSM	ENSG00000214548.18	ENST00000429159.6	1608	7	10	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	550.145056629007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100825995	True	NA	NA	False	AATAAA	-21	NA	100826117	100861023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100832511_100832642_100836166_100836301_100845457_100845534_100860690
WTC11_00025239	chr14	+	1726	8	FSM	ENSG00000214548.18	ENST00000554639.5	1712	8	-14	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	590.65936866854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836166_100836301_100845457_100845534_100860690
WTC11_00025240	chr14	+	1835	9	FSM	ENSG00000214548.18	ENST00000423456.6	1835	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	607.101502530672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100832511_100832642_100834631_100834752_100836166_100836301_100845457_100845534_100860690
WTC11_00025241	chr14	+	1623	7	FSM	ENSG00000214548.18	ENST00000648456.1	1643	7	20	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	580.378731710787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829788_100831420_100831535_100836166_100836301_100845457_100845534_100860690
WTC11_00025242	chr14	+	1589	7	FSM	ENSG00000214548.18	ENST00000451743.6	1582	7	-8	1	0	1	multi-exon	FALSE	canonical	3	156	junction_4	544.384591381253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGTGCTACTAATATAA	100825995	True	NA	NA	False	AATAAA	-28	NA	100826117	100861030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
WTC11_00025243	chr14	+	1794	7	NIC	ENSG00000214548.18	novel	1760	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	35	junction_3	491.99141817267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100826006	True	NA	NA	False	AATAAA	-21	NA	100826128	100861023	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100835738_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00025247	chr14	+	3452	4	FSM	ENSG00000214548.18	ENST00000398461.5	3452	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	625.294064154352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGATGGATGTGCTA	100832951	False	NA	NA	False	AATAAA	-19	NA	100832968	100861021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100835880_100836166_100836301_100845457_100845534_100860690
WTC11_00025248	chr14	+	4867	2	FSM	ENSG00000214548.18	ENST00000455531.1	4867	2	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACATTGCGTGT	100833259	False	NA	NA	False	AATAAA	-29	NA	100833277	100847301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100836301_100845457
WTC11_00025249	chr14	+	2853	4	FSM	ENSG00000214548.18	ENST00000524035.5	2853	4	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_1	353.061845385007	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGATGGATGTGCTA	100833636	False	NA	NA	False	AATAAA	-19	NA	100833763	100861021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00025251	chr14	+	954	3	FSM	ENSG00000214548.18	ENST00000522618.1	954	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_1	41.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTCTCAATAAATGTG	100835709	False	NA	NA	False	NA	NA	NA	100835719	100860987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100836301_100845457_100845534_100860690
WTC11_00025258	chr14	+	3746	13	NIC	ENSG00000225746.13	novel	5299	24	NA	NA	-1386	602	intron_retention	FALSE	canonical	3	6	junction_1	35.4067633212765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAGAAATAGCAAAGATC	100935999	False	NA	NA	False	CATAAA	-18	NA	100936014	100957557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100936311_100937402_100937489_100938879_100938957_100940364_100940451_100942761_100942839_100944808_100944926_100947033_100947117_100948977_100949040_100949514_100950473_100951431_100951495_100953963_100954047_100954921_100955007_100955884
WTC11_00025266	chr14	+	625	4	FSM	ENSG00000225746.13	ENST00000442197.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAGAAGATCAAT	100961016	False	NA	NA	False	AATAAA	-35	NA	100961026	100967040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100961133_100963964_100964001_100964352_100964440_100966644
WTC11_00025268	chr14	+	1785	12	FSM	ENSG00000225746.13	ENST00000554693.4	1785	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	4.22898303622291	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATGAGGTGTATTTA	100967486	False	NA	NA	False	AATAAA	-33	NA	100967500	100987280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100967787_100968647_100968725_100969458_100969546_100972261_100972347_100974125_100974204_100975410_100975497_100980576_100980664_100982503_100982586_100983460_100983543_100984347_100984435_100985654_100985741_100986618
WTC11_00025270	chr14	+	1103	8	FSM	ENSG00000225746.13	ENST00000658511.1	1132	8	29	0	29	0	multi-exon	FALSE	canonical	2	11	junction_6	4.49943307086389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCTCATTTTCTGTGTT	100980556	False	NA	NA	False	AAGAAA	-1	NA	100980576	100989212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100980664_100982503_100982586_100983460_100983543_100984347_100984435_100985654_100985741_100986618_100986707_100987543_100987631_100988708
WTC11_00025271	chr14	+	1804	4	FSM	ENSG00000223403.6	ENST00000452349.2	1804	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTGTGTCTGTATG	NA	False	NA	13	True	AATAAA	-22	NA	101069191	101072937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101070056_101070441_101070616_101071804_101071992_101072358
WTC11_00025272	chr14	+	2641	2	FSM	ENSG00000223403.6	ENST00000429368.2	2641	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTGTGTCTGTATG	NA	False	NA	13	True	AATAAA	-22	NA	101069910	101072937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101070056_101070441
WTC11_00025273	chr14	+	438	1	FSM	ENSG00000241494.1	ENST00000472981.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATCTTATATACGAGCT	NA	False	NA	NA	False	AATACA	-33	NA	101677942	101678380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101677900_101678400
WTC11_00025276	chr14	+	922	1	ISM	ENSG00000078304.19	ENST00000556260.6	2013	3	3747	511	2689	-511	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTAACTTTTGCCTTA	101765552	False	NA	NA	False	ATTAAA	-14	NA	101765616	101766538	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_101765600_101766500
WTC11_00025277	chr14	+	1904	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	-22	-1147	10	1147	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGCATTTCACAGATGGG	101807703	True	NA	NA	False	NA	NA	NA	101809812	101837848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101836168
WTC11_00025279	chr14	+	4328	14	FSM	ENSG00000078304.19	ENST00000334743.9	4328	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	128.186393502938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTCATCATGAAACTAAA	101807785	True	NA	3	True	AATAAA	-17	NA	101809894	101927977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101917830_101917948_101925140
WTC11_00025280	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	TRUE	canonical	3	346	junction_1	43.9573422067838	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	101807785	True	NA	13	True	AATAAA	-22	NA	101809894	101912625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
WTC11_00025281	chr14	+	987	9	FSM	ENSG00000078304.19	ENST00000556218.5	987	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	134.939743496866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTACTTTTAAACTT	101882188	True	NA	-12	True	NA	NA	NA	101882204	101912600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101909588_101909691_101912400
WTC11_00025284	chr14	+	8411	40	FSM	ENSG00000197102.14	ENST00000645114.2	8400	40	-11	0	0	0	multi-exon	TRUE	canonical	3	81	junction_4	50.9985110197616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCCTCTTGGGTTACTT	101945697	True	NA	NA	False	AATAAA	-22	NA	101964572	102017619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382
WTC11_00025286	chr14	+	14288	78	FSM	ENSG00000197102.14	ENST00000360184.10	19940	78	0	5652	0	-1	multi-exon	FALSE	canonical	3	81	junction_4	193.466692498802	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGCTCCGCCTCTTCTG	101945697	True	NA	12	True	AATAAA	-13	NA	101964572	102050791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382_102017505_102018450_102018617_102019892_102020057_102022750_102022881_102026573_102026708_102027173_102027289_102027382_102027545_102027618_102027834_102027936_102028142_102029538_102029713_102029818_102029939_102030161_102030283_102032271_102032468_102033064_102033183_102033268_102033485_102033975_102034189_102034324_102034453_102036488_102036643_102038459_102038607_102038697_102038849_102039000_102039255_102039411_102039547_102039637_102039733_102040235_102040411_102040597_102040674_102041573_102041735_102042012_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070_102050199_102050434
WTC11_00025287	chr14	+	14519	77	FSM	ENSG00000197102.14	ENST00000681574.1	14519	77	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	184.555805638124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCGGCTCCGCCTC	101945697	True	NA	7	True	AATAAA	-8	NA	101964572	102050786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382_102017505_102018450_102018617_102019892_102020057_102022750_102022881_102026573_102026708_102027173_102027289_102027382_102027545_102027618_102027834_102027936_102028142_102029538_102029713_102029818_102029939_102030161_102030283_102032271_102032468_102033064_102033183_102033268_102033485_102033975_102034189_102034324_102034453_102036488_102036643_102038459_102038607_102038697_102038849_102039000_102039255_102039411_102039547_102039637_102039733_102040235_102040411_102040597_102040674_102041573_102041735_102042012_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070
WTC11_00025288	chr14	+	19890	78	FSM	ENSG00000197102.14	ENST00000679720.1	19903	78	0	13	0	-13	multi-exon	FALSE	canonical	1	10	junction_77	186.467762213964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTCTACAACTCGGTG	101945697	True	NA	-6	True	AATAAA	-4	NA	101964572	102056430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382_102017505_102018450_102018617_102019892_102020057_102022750_102022881_102026573_102026708_102027173_102027289_102027382_102027545_102027618_102027834_102027936_102028142_102029538_102029713_102029818_102029939_102030161_102030283_102032271_102032468_102033064_102033183_102033268_102033485_102033975_102034189_102034324_102034453_102036488_102036643_102038459_102038607_102038697_102038849_102039000_102039255_102039411_102039547_102039637_102039733_102040235_102040411_102040597_102040674_102041573_102041735_102042012_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070_102050199_102050471
WTC11_00025297	chr14	+	2159	13	FSM	ENSG00000197102.14	ENST00000644239.2	2298	13	139	0	139	0	multi-exon	FALSE	canonical	3	483	junction_2	95.5092709287079	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGAGCCGGCTCCGCC	102041895	False	NA	5	True	AATAAA	-6	NA	102041913	102050784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070_102050199_102050434
WTC11_00025300	chr14	+	2600	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	16	0	8	0	multi-exon	FALSE	canonical	3	59	junction_3	26.5497436689865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	102136949	True	NA	8	True	ATTAAA	-16	NA	102139859	102223673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
WTC11_00025303	chr14	+	2388	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	-4	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	102136982	True	NA	18	True	AATAAA	-18	NA	102139892	102210527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102140173_102194937_102195121_102208602
WTC11_00025309	chr14	+	2181	6	FSM	ENSG00000022976.16	ENST00000558490.5	931	6	-1253	3	-1083	0	multi-exon	FALSE	canonical	3	20	junction_5	14.6342065039414	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCTGTCTACATTTT	NA	False	NA	4	True	TATAAA	-15	NA	102330438	102342364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102342102
WTC11_00025310	chr14	+	8691	20	FSM	ENSG00000196663.16	ENST00000359520.12	8704	20	13	0	13	0	multi-exon	TRUE	canonical	3	16	junction_4	7.6455407675853	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTCTAACTACT	102361935	True	NA	13	True	AATAAA	-21	NA	102362953	102502477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140_102465290_102496978_102497121_102497569_102497720_102498102
WTC11_00025313	chr14	+	5751	12	FSM	ENSG00000089902.10	ENST00000262241.7	5751	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	8.52609024559517	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAATGAAAGCATTTTC	102590205	True	NA	NA	False	AATAAA	-28	NA	102592648	102730561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102593188_102593265_102593326_102681894_102681979_102701277_102701331_102707350_102707513_102708464_102708584_102710934_102711014_102714422_102714618_102721006_102721085_102721319_102721378_102722186_102722417_102726467
WTC11_00025314	chr14	+	8073	12	FSM	ENSG00000131323.16	ENST00000392745.8	7806	12	-267	0	-267	0	multi-exon	TRUE	canonical	3	21	junction_6	5.17144096484651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	102777162	False	NA	22	True	AATAAA	-19	NA	102777181	102911500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102777676_102830333_102830473_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
WTC11_00025315	chr14	+	7640	11	FSM	ENSG00000131323.16	ENST00000560371.5	7640	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.61301201497221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	102777419	True	NA	22	True	AATAAA	-19	NA	102777475	102911500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102777676_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
WTC11_00025317	chr14	+	4683	12	FSM	ENSG00000185215.11	ENST00000560869.6	4683	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	10.6724330143731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGAGTGATTTATTTT	103123094	True	NA	9	True	TATAAA	-17	NA	103123460	103137439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103123952_103126309_103126693_103127004_103127630_103129739_103129855_103130001_103130125_103130314_103130416_103131051_103131151_103131638_103131763_103132749_103132873_103133361_103133518_103133681_103133804_103135218
WTC11_00025322	chr14	+	583	4	FSM	ENSG00000100664.11	ENST00000560338.5	580	4	-3	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	956.480121185078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGAATCCTGAAACAGA	103312188	True	NA	NA	False	ATTAAA	-22	NA	103334188	103336825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676
WTC11_00025324	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	235.608689452351	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	103312236	True	NA	10	True	AATAAA	-22	NA	103334236	103345025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
WTC11_00025327	chr14	+	4384	10	FSM	ENSG00000100664.11	ENST00000558506.1	4384	10	0	0	0	0	multi-exon	FALSE	canonical	3	1933	junction_8	87.6323690126282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGAATCTGCCCTGTT	103334922	False	NA	21	True	ATTAAA	-34	NA	103334948	103343228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
WTC11_00025331	chr14	+	2662	16	FSM	ENSG00000075413.19	ENST00000440884.7	2643	16	-19	0	-4	0	multi-exon	FALSE	canonical	3	13	junction_7	253.259673501768	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATTAAAGTGTTTTCC	NA	False	NA	-17	True	NA	NA	NA	103385372	103503252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
WTC11_00025332	chr14	+	2644	15	FSM	ENSG00000075413.19	ENST00000560417.6	2625	15	-19	0	-4	0	multi-exon	TRUE	canonical	3	49	junction_14	169.629608505215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGTATAGAATAATA	NA	False	NA	13	True	ATTAAA	-20	NA	103385372	103503282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103502881
WTC11_00025333	chr14	+	2984	17	FSM	ENSG00000075413.19	ENST00000676938.1	2968	17	-16	0	-4	0	multi-exon	FALSE	canonical	3	31	junction_16	210.185994642245	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGTCTGAGGACGAG	NA	False	NA	12	True	NA	NA	NA	103385372	103503337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
WTC11_00025334	chr14	+	3350	15	FSM	ENSG00000075413.19	ENST00000676694.1	3334	15	-16	0	-4	0	multi-exon	FALSE	canonical	3	30	junction_3	175.444988180201	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	False	NA	-41	True	TTTAAA	-31	NA	103385372	103503779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
WTC11_00025335	chr14	+	3247	16	FSM	ENSG00000075413.19	ENST00000678619.1	3230	16	-17	0	-4	0	multi-exon	FALSE	canonical	3	28	junction_1	252.332708057349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCACAAGATAATTAAAAAT	NA	False	NA	-28	True	TTTAAA	-44	NA	103385372	103503792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
WTC11_00025336	chr14	+	3440	17	FSM	ENSG00000075413.19	ENST00000678022.1	3416	17	-24	0	-4	0	multi-exon	FALSE	canonical	3	27	junction_15	267.753902574267	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAATTAAAAATTCACT	NA	False	NA	-23	True	NA	NA	NA	103385372	103503797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
WTC11_00025337	chr14	+	3432	17	FSM	ENSG00000075413.19	ENST00000677228.1	3413	17	-19	0	-4	0	multi-exon	FALSE	canonical	2	11	junction_11	243.31319034066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	NA	False	NA	0	True	ATTAAA	-12	NA	103385372	103503820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468085_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103500155_103500201_103502881
WTC11_00025341	chr14	+	3185	15	FSM	ENSG00000075413.19	ENST00000677829.1	3165	15	-20	0	-2	0	multi-exon	FALSE	canonical	3	28	junction_1	174.882482407648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	103378034	True	NA	-41	True	TTTAAA	-31	NA	103385394	103503779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
WTC11_00025344	chr14	+	3823	14	FSM	ENSG00000075413.19	ENST00000678071.1	3813	14	-10	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	254.143066450478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	103378054	True	NA	0	True	ATTAAA	-12	NA	103385414	103503820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103500155_103500201_103502881
WTC11_00025346	chr14	+	3414	16	FSM	ENSG00000075413.19	ENST00000678169.1	3394	16	-20	0	-2	0	multi-exon	FALSE	canonical	3	30	junction_3	248.369939136496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	103378034	True	NA	0	True	ATTAAA	-12	NA	103385394	103503820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103500155_103500201_103502881
WTC11_00025347	chr14	+	3501	18	FSM	ENSG00000075413.19	ENST00000429436.7	3481	18	-20	0	-2	0	multi-exon	FALSE	canonical	3	27	junction_16	233.578287965719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	103378034	True	NA	11	True	ATTAAA	-23	NA	103385394	103503831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
WTC11_00025348	chr14	+	3283	16	FSM	ENSG00000075413.19	ENST00000303622.13	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_11	81.2257758760522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	103385529	False	NA	11	True	ATTAAA	-23	NA	103385540	103503831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
WTC11_00025350	chr14	+	3284	16	FSM	ENSG00000075413.19	ENST00000216288.11	2911	16	-407	34	0	0	multi-exon	FALSE	canonical	3	230	junction_11	123.794273786077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCACAAGATAATTAAAAAT	103378092	True	NA	-28	True	TTTAAA	-44	NA	103385452	103503792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468080_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
WTC11_00025358	chr14	+	583	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	-8	0	-3	0	multi-exon	FALSE	canonical	3	125	junction_1	216.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	103558251	True	NA	-1	True	NA	NA	NA	103562956	103590504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563125_103587273_103587365_103590180
WTC11_00025359	chr14	+	801	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	-19	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	209.19103443716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558254	True	NA	22	True	AATAAA	-15	NA	103562959	103590527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
WTC11_00025360	chr14	+	2512	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	-6	0	-3	0	multi-exon	FALSE	canonical	3	427	junction_2	55.5309598332318	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	103558251	True	NA	NA	False	NA	NA	NA	103562956	103592171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
WTC11_00025362	chr14	+	908	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.117155128952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	103558465	False	NA	21	True	AATAAA	-14	NA	103563170	103590526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
WTC11_00025364	chr14	+	15102	15	FSM	ENSG00000126214.22	ENST00000348520.10	15091	15	-11	0	-11	0	multi-exon	FALSE	canonical	2	71	junction_13	72.5303947546496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCATCTCCTTATTT	103621167	True	NA	9	True	AATAAA	-23	NA	103629165	103714249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103700654_103700728_103701200
WTC11_00025366	chr14	+	2541	15	NIC	ENSG00000126214.22	novel	3250	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	61	junction_13	86.8189530704264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	103621204	True	NA	3	True	AATAAA	-1	NA	103629202	103686211	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103684985_103685037_103685637
WTC11_00025367	chr14	+	3274	15	FSM	ENSG00000126214.22	ENST00000389744.8	3250	15	-24	0	0	0	multi-exon	FALSE	canonical	2	91	junction_13	81.0585578203706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACGTACATGGTAATT	103621204	True	NA	NA	False	AAAAAG	-21	NA	103629202	103686917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
WTC11_00025368	chr14	+	2493	16	FSM	ENSG00000126214.22	ENST00000452929.6	2453	16	-71	31	-7	0	multi-exon	FALSE	canonical	2	47	junction_13	98.1666610073569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATTAAAAGTT	103621171	True	NA	-12	True	NA	NA	NA	103629169	103701513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103700654_103700728_103701200
WTC11_00025369	chr14	+	2408	15	NIC	ENSG00000126214.22	novel	2426	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_12	102.340193991034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621204	True	NA	19	True	ATTAAA	-16	NA	103629202	103701544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103700654_103700728_103701200
WTC11_00025370	chr14	+	3135	14	FSM	ENSG00000126214.22	ENST00000553286.5	3135	14	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_13	70.2582724814025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	103621238	True	NA	3	True	AATAAA	-1	NA	103629236	103686211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985
WTC11_00025372	chr14	+	2298	16	FSM	ENSG00000126214.22	ENST00000246489.11	2294	16	-4	0	0	0	multi-exon	FALSE	canonical	2	42	junction_15	117.267140419737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	103621238	True	NA	NA	False	NA	NA	NA	103629236	103693743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103693552
WTC11_00025373	chr14	+	2269	15	FSM	ENSG00000126214.22	ENST00000557450.5	2265	15	-4	0	0	0	multi-exon	FALSE	canonical	2	81	junction_13	70.1575850118423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	103621238	True	NA	-11	True	NA	NA	NA	103629236	103701514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103700654_103700728_103701200
WTC11_00025374	chr14	+	2467	17	FSM	ENSG00000126214.22	ENST00000555836.5	2467	17	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_15	114.953234377072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	103621238	True	NA	-11	True	NA	NA	NA	103629236	103701514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103700654_103700728_103701200
WTC11_00025376	chr14	+	2430	16	FSM	ENSG00000126214.22	ENST00000554280.5	2426	16	-4	0	0	0	multi-exon	FALSE	canonical	2	60	junction_14	95.8511809467619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621238	True	NA	19	True	ATTAAA	-16	NA	103629236	103701544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103700654_103700728_103701200
WTC11_00025379	chr14	+	1029	7	NNC	ENSG00000126214.22	novel	3250	15	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_4	128.347185399603	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	103673367	False	NA	3	True	AATAAA	-1	NA	103673392	103686211	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679407_103679546_103684985_103685037_103685637
WTC11_00025387	chr14	+	811	1	FSM	ENSG00000269958.1	ENST00000602422.1	811	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGAAAGGCTGTTT	103696341	False	NA	29	True	AATAAA	-32	NA	103696352	103697163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103696400_103697200
WTC11_00025388	chr14	+	1150	2	FSM	ENSG00000126214.22	ENST00000556986.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103699910	False	NA	19	True	ATTAAA	-16	NA	103699921	103701544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103700728_103701200
WTC11_00025391	chr14	+	589	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	-23	0	0	0	multi-exon	FALSE	canonical	3	926	junction_4	17.3691536926817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	103703841	True	NA	NA	False	NA	NA	NA	103715807	103729211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
WTC11_00025393	chr14	+	548	4	FSM	ENSG00000100711.14	ENST00000556610.5	364	4	0	-184	0	0	multi-exon	FALSE	canonical	3	35	junction_1	365.579296763674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCAGCAGATGTACTTT	103703872	True	NA	NA	False	TATAAA	-14	NA	103715838	103730031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103715980_103728907_103728984_103729090_103729183_103729792
WTC11_00025394	chr14	+	4453	6	FSM	ENSG00000100711.14	ENST00000555501.1	4453	6	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	275.889543114631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	103712542	False	NA	20	True	ATTAAA	-17	NA	103724508	103733664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
WTC11_00025399	chr14	+	1704	5	FSM	ENSG00000203485.14	ENST00000398337.8	1689	5	-15	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.4696690920006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	104686432	True	NA	NA	False	AATAAA	-19	NA	104689605	104704809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915
WTC11_00025402	chr14	+	2200	11	FSM	ENSG00000203485.14	ENST00000674631.1	2200	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.23525852372309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATCCAGTAAGGTAT	104709266	False	NA	11	True	AATAAA	-13	NA	104709293	104715324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202
WTC11_00025406	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1413	junction_3	41.8807831827438	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	104741634	True	NA	19	True	AATAAA	-17	NA	104753146	104759654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
WTC11_00025407	chr14	+	613	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	-63	0	-51	0	multi-exon	FALSE	canonical	3	45	junction_1	684	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	104741583	True	NA	24	True	AATAAA	-22	NA	104753095	104759659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104753320_104756603_104756761_104759427
WTC11_00025408	chr14	+	4163	2	FSM	ENSG00000184990.13	ENST00000556431.1	4142	2	-21	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGACTCTTGTCTGT	104741668	True	NA	18	True	AATAAA	-16	NA	104753180	104759653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104753320_104755629
WTC11_00025414	chr14	+	2379	5	FSM	ENSG00000140104.14	ENST00000547315.6	2379	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3.35410196624968	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	104985590	True	NA	5	True	AATAAA	-14	NA	104985787	104995516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104986855_104988942_104989089_104991490_104991621_104992947_104993065_104994597
WTC11_00025415	chr14	+	1910	4	FSM	ENSG00000140104.14	ENST00000550614.5	1912	4	0	2	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	104988766	False	NA	5	True	AATAAA	-14	NA	104988963	104995516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104989708_104991490_104991621_104992947_104993065_104994597
WTC11_00025417	chr14	+	2210	4	FSM	ENSG00000184887.14	ENST00000392554.8	2217	4	7	0	2	0	multi-exon	FALSE	canonical	3	77	junction_1	22.2261107708929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACGTGTCAGTAAATGAC	105247602	True	NA	18	True	AATAAA	-18	NA	105248539	105251093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105249086_105249156_105249248_105249359_105249479_105249639
WTC11_00025418	chr14	+	2198	3	FSM	ENSG00000184887.14	ENST00000463376.6	2195	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	98	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACGTGTCAGTAAATGAC	105247685	True	NA	18	True	AATAAA	-18	NA	105248622	105251093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105249248_105249359_105249479_105249639
WTC11_00025420	chr14	+	3427	24	FSM	ENSG00000179364.15	ENST00000325438.12	3708	24	281	0	-52	0	multi-exon	FALSE	canonical	3	246	junction_15	25.7926148190921	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	105311303	True	NA	-11	True	AATAAA	-30	NA	105314695	105395206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
WTC11_00025423	chr14	+	3453	18	FSM	ENSG00000179364.15	ENST00000551692.5	3453	18	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_10	29.0375011078473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGCTTTTCAATAC	105368061	False	NA	-4	True	AATAAA	-37	NA	105368084	105395213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
WTC11_00025424	chr14	+	2501	1	FSM	ENSG00000279495.1	ENST00000624831.1	2501	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACAGGTTGACAGAAAAT	105370406	False	NA	NA	False	AAAAAG	-7	NA	105370417	105372918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105370400_105372900
WTC11_00025426	chr14	+	1157	8	FSM	ENSG00000179364.15	ENST00000547903.1	1157	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	97.3820584405693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGCCTGCCCTGTGAC	105381912	False	NA	NA	False	NA	NA	NA	105381923	105391598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105382059_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206
WTC11_00025427	chr14	+	1876	9	FSM	ENSG00000179364.15	ENST00000551743.5	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	22.8387691218244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATGTTGCTCTTCTGA	105383098	False	NA	34	True	AATACA	-18	NA	105383118	105395251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
WTC11_00025431	chr14	+	1371	8	NIC	ENSG00000182979.18	novel	2770	20	NA	NA	-2	939	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	233.524460109402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTGTGTGAATCTG	105411163	True	NA	43	True	TTTAAA	-21	NA	105419824	105455237	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105454627
WTC11_00025433	chr14	+	2873	21	FSM	ENSG00000182979.18	ENST00000331320.12	2871	21	-2	0	-2	0	multi-exon	FALSE	canonical	3	114	junction_17	170.933203328084	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411163	True	NA	26	True	ATTAAA	-44	NA	105419824	105470729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
WTC11_00025435	chr14	+	2770	20	FSM	ENSG00000182979.18	ENST00000406191.5	2770	20	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	114.099606579544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411230	False	NA	26	True	ATTAAA	-44	NA	105419891	105470729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
WTC11_00025437	chr14	+	2709	20	FSM	ENSG00000182979.18	ENST00000405646.5	2709	20	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_16	166.622269248196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411276	False	NA	26	True	ATTAAA	-44	NA	105419937	105470729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
WTC11_00025441	chr14	+	977	6	NIC	ENSG00000182979.18	novel	2770	20	NA	NA	11	895	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	287.113496722115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACCTGGCCTCATTTTT	105419727	False	NA	-1	True	NA	NA	NA	105420029	105455193	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_105420064_105438671_105438740_105450057_105450185_105450260_105450325_105454192_105454311_105454627
WTC11_00025451	chr14	+	516	4	FSM	ENSG00000185347.18	ENST00000451719.5	522	4	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	43.2768863123133	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTCCAGTCAGCAGG	105490514	True	NA	NA	False	NA	NA	NA	105491239	105492691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105491361_105491621_105491701_105492106_105492310_105492578
WTC11_00025454	chr14	+	1926	9	FSM	ENSG00000185347.18	ENST00000392523.9	1920	9	-6	0	6	0	multi-exon	FALSE	canonical	3	14	junction_6	27.9228848796108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGGGTTTCCCTGTT	105490514	True	NA	39	True	AATAAA	-39	NA	105491239	105499248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105495879_105496087_105497356_105497444_105497797_105497978_105498616
WTC11_00025459	chr14	-	2285	1	FSM	ENSG00000257175.2	ENST00000548656.2	2254	1	-27	-4	-27	4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTGTGTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	18637235	18634950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_18635000_18637200
WTC11_00025460	chr14	-	738	1	FSM	ENSG00000278594.1	ENST00000619332.1	1049	1	408	-97	408	97	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCAGGGGTTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	19132482	19131744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_19131700_19132500
WTC11_00025461	chr14	-	276	1	FSM	ENSG00000258768.2	ENST00000556738.1	3829	1	3372	181	3372	-181	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGCAATCGTATGTATA	NA	False	NA	NA	False	NA	NA	NA	20260936	20260660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20260700_20260900
WTC11_00025462	chr14	-	4753	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	-16	0	16	multi-exon	FALSE	canonical	3	178	junction_9	14.8656535113996	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAATGCTCTCTCTTTTT	-20303605	True	NA	16	True	AATATA	-32	NA	20305951	20286210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
WTC11_00025466	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	160.309769578221	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20332986	False	NA	-8	True	AATAAA	-22	NA	20333010	20311367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
WTC11_00025467	chr14	-	1472	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	-2	0	0	multi-exon	FALSE	canonical	3	185	junction_6	102.256893274841	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326767	True	NA	-8	True	AATAAA	-22	NA	20333279	20311367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
WTC11_00025468	chr14	-	1670	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	16	0	7	0	multi-exon	FALSE	non_canonical	0	0	junction_3	198.004122818342	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326784	True	NA	-8	True	AATAAA	-22	NA	20333296	20311367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
WTC11_00025469	chr14	-	1289	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	16	0	7	0	multi-exon	FALSE	canonical	3	16	junction_5	172.350805045988	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326784	True	NA	-8	True	AATAAA	-22	NA	20333296	20311367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
WTC11_00025473	chr14	-	307	1	FSM	ENSG00000277209.1	ENST00000516869.1	333	1	22	4	22	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCCATTTTTGGAAAAAAA	-20338198	True	NA	NA	False	NA	NA	NA	20343385	20343078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20343100_20343400
WTC11_00025474	chr14	-	1695	8	NNC	ENSG00000165782.11	novel	1696	7	NA	NA	0	36806	intron_retention	FALSE	non_canonical	0	0	junction_1	131.89807443938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-20457679	True	NA	NA	False	NA	NA	NA	20461434	20420874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_20420907_20457859_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
WTC11_00025475	chr14	-	1541	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	435	0	227	multi-exon	TRUE	canonical	3	192	junction_8	12.6984250992003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATCATAACTATTATTA	-20454778	False	3755	NA	False	NA	NA	NA	20454812	20446835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
WTC11_00025476	chr14	-	464	6	FSM	ENSG00000092094.11	ENST00000555785.2	464	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_4	78.860890180114	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAGATGATGGCAACAA	-20449028	False	NA	NA	False	NA	NA	NA	20449273	20447677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448901_20449014_20449170
WTC11_00025478	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	80.3258986877831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-20457679	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
WTC11_00025480	chr14	-	2162	2	FSM	ENSG00000165782.11	ENST00000557041.1	3453	2	1291	0	-419	0	multi-exon	FALSE	canonical	3	379	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	-20460076	False	NA	-16	True	AATAAA	-17	NA	20460110	20457857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20459297_20459387
WTC11_00025481	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	78.622869163848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	-20457710	True	NA	-16	True	AATAAA	-17	NA	20461465	20457857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
WTC11_00025484	chr14	-	1391	2	FSM	ENSG00000165782.11	ENST00000556093.1	277	2	-687	-427	-115	427	multi-exon	FALSE	canonical	3	278	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGAGTGGGGGATGTGG	-20461546	False	NA	NA	False	NA	NA	NA	20461580	20459833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20460299_20460654
WTC11_00025485	chr14	-	2011	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	36	7	-8	1	multi-exon	FALSE	canonical	3	9	junction_15	38.5247972090704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTTATTATTCTTTGTC	-21025162	True	NA	-13	True	AATAAA	-18	NA	21025740	21016770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
WTC11_00025486	chr14	-	2036	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	83	8	-8	1	multi-exon	FALSE	canonical	3	28	junction_15	40.2925965077126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTTATTATTCTTTGTC	-21025162	True	NA	-13	True	AATAAA	-18	NA	21025740	21016770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
WTC11_00025487	chr14	-	2113	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	9	0	0	multi-exon	FALSE	canonical	3	28	junction_16	34.5377963251855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	NA	False	NA	-14	True	AATAAA	-17	NA	21025776	21016771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
WTC11_00025488	chr14	-	2984	16	FSM	ENSG00000165795.25	ENST00000556147.6	2978	16	0	-6	0	-2	multi-exon	FALSE	canonical	3	98	junction_15	22.7990253202973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTCTTTGTCTAGGT	-21024350	True	NA	-8	True	AATAAA	-23	NA	21025061	21016765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029
WTC11_00025490	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	44.3888775368289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	NA	False	NA	-14	True	AATAAA	-17	NA	21025819	21016771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
WTC11_00025491	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	36.8395922284104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
WTC11_00025509	chr14	-	3042	5	FSM	ENSG00000165804.16	ENST00000360947.8	3055	5	13	0	13	0	multi-exon	FALSE	canonical	3	94	junction_4	103.670149995068	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21095435	True	NA	-27	True	AATAAA	-21	NA	21098642	21090076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21098311
WTC11_00025510	chr14	-	3188	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	121.091907244043	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21103487	False	NA	-27	True	AATAAA	-21	NA	21103579	21090076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21103102
WTC11_00025512	chr14	-	2669	2	FSM	ENSG00000165804.16	ENST00000553296.1	560	2	-301	-1808	-301	-1082	multi-exon	FALSE	canonical	3	210	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATCGCACCCACTCTC	-21093513	False	NA	NA	False	NA	NA	NA	21094129	21091165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21093291_21093585
WTC11_00025517	chr14	-	6782	1	FSM	ENSG00000258441.1	ENST00000555379.1	5425	1	-1424	67	-27	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTAATAGTGTCATAT	-21206439	False	NA	-88	True	NA	NA	NA	21206927	21200145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21200100_21206900
WTC11_00025518	chr14	-	3180	9	FSM	ENSG00000092199.19	ENST00000553300.6	3165	9	0	-15	0	4	multi-exon	FALSE	canonical	3	5281	junction_8	1084.19439418169	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTTTTTTATTTATA	-21168443	True	NA	7	True	ATTAAA	-35	NA	21269442	21209131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
WTC11_00025519	chr14	-	3305	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	-4	0	4	multi-exon	FALSE	canonical	3	2080	junction_6	2035.65572291147	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTTTTTTATTTATA	-21269483	False	NA	7	True	ATTAAA	-35	NA	21269494	21209131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
WTC11_00025520	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	3068.17418663057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	-21168426	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
WTC11_00025522	chr14	-	1705	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	2080	junction_7	2011.2125695709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	-21168412	True	NA	-29	True	AATAAA	-36	NA	21269411	21210549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
WTC11_00025523	chr14	-	1702	8	NIC	ENSG00000092199.19	novel	1658	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	470	junction_2	2919.62558404676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	-21168412	True	NA	-29	True	AATAAA	-36	NA	21269411	21210549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
WTC11_00025524	chr14	-	1784	9	FSM	ENSG00000092199.19	ENST00000554455.5	1784	9	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_5	2111.48356834123	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	-21168426	True	NA	-29	True	AATAAA	-36	NA	21269425	21210549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
WTC11_00025525	chr14	-	1601	7	ISM	ENSG00000092199.19	ENST00000556897.5	1252	8	28432	-410	-2823	0	3prime_fragment	FALSE	canonical	3	6412	junction_5	690.436757905217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	NA	False	NA	-35	True	AATAAA	-30	NA	21234245	21210555	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952
WTC11_00025526	chr14	-	4501	8	FSM	ENSG00000092199.19	ENST00000430246.6	4501	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	2654.45317017518	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	-21265505	False	NA	-35	True	AATAAA	-30	NA	21265516	21210555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21262600
WTC11_00025528	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2381.63415208445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168405	True	NA	-92	True	NA	NA	NA	21269404	21210612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
WTC11_00025529	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2805.80899374405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168422	True	NA	-92	True	NA	NA	NA	21269421	21210612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
WTC11_00025530	chr14	-	1695	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	-324	0	0	multi-exon	FALSE	canonical	3	1574	junction_5	2716.54956719372	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168426	True	NA	-92	True	NA	NA	NA	21269425	21210612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
WTC11_00025531	chr14	-	1403	9	FSM	ENSG00000092199.19	ENST00000556513.5	1403	9	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_7	3367.42088808334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	-21168426	True	NA	-5	True	AATAAA	-23	NA	21269425	21210932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
WTC11_00025532	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	3108.87539956171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-21168443	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
WTC11_00025538	chr14	-	760	3	FSM	ENSG00000092199.19	ENST00000557033.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	114.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGAGGTGTGAGGTCC	-21168443	True	NA	NA	False	NA	NA	NA	21269442	21262602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21262699_21263310_21263830_21269297
WTC11_00025540	chr14	-	4558	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	38	-163	0	163	multi-exon	FALSE	canonical	3	1308	junction_10	133.961391452911	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAACCAAATTCATGTTA	-21347402	True	NA	NA	False	NA	NA	NA	21383981	21351312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
WTC11_00025541	chr14	-	2327	6	FSM	ENSG00000092201.10	ENST00000557394.5	2324	6	0	-3	0	0	multi-exon	FALSE	canonical	3	1748	junction_4	64.4533940145901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-21358370	False	NA	-10	True	AATAAA	-32	NA	21358402	21351475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926
WTC11_00025544	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-21347434	True	NA	NA	False	NA	NA	NA	21384013	21372074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21372718_21373337_21373431_21383861
WTC11_00025546	chr14	-	4289	19	ISM	ENSG00000100888.15	ENST00000555935.2	5458	28	7775	-410	14	3	3prime_fragment	FALSE	canonical	3	14	junction_15	28.0282595487721	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGTTCTATGTTTGC	-21402104	False	NA	-22	True	AATAAA	-24	NA	21402115	21385190	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400332_21400412_21400613_21400874_21401072_21401402_21401514_21401956
WTC11_00025547	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_37	26.1457956401538	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-21451811	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
WTC11_00025548	chr14	-	5865	28	FSM	ENSG00000100888.15	ENST00000555935.2	5458	28	0	-407	0	0	multi-exon	FALSE	canonical	3	14	junction_15	26.7678635404195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTTTGTTCTATGTT	-21409879	False	NA	-25	True	AATAAA	-21	NA	21409890	21385193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400332_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850
WTC11_00025549	chr14	-	415	3	FSM	ENSG00000100888.15	ENST00000554384.1	735	3	10	310	10	-310	multi-exon	FALSE	canonical	3	59	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTCCTACATACTCT	NA	False	NA	NA	False	NA	NA	NA	21412996	21408632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21408826_21409850_21409989_21412912
WTC11_00025551	chr14	-	2959	8	NNC	ENSG00000129472.15	novel	2914	8	NA	NA	0	112	intron_retention	FALSE	canonical	2	4	junction_5	10.4178026591454	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTCTGACCCCAGTAGTA	-21473980	True	NA	NA	False	ATTAAA	-43	NA	21476936	21458907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468709_21474866_21474935_21476527_21476600_21476826
WTC11_00025552	chr14	-	3001	7	FSM	ENSG00000129472.15	ENST00000461909.1	630	7	3	-2374	3	149	multi-exon	FALSE	canonical	3	22	junction_1	6.39444203108363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACCACAGGAAGTTGGAA	-21473714	False	2956	NA	False	NA	NA	NA	21476670	21458870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527
WTC11_00025553	chr14	-	528	3	FSM	ENSG00000129472.15	ENST00000475857.1	621	3	0	93	0	-93	multi-exon	FALSE	canonical	3	31	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTCCCCTTTTGATA	-21474004	True	NA	NA	False	AATAAA	-31	NA	21476960	21474612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21474935_21476527_21476600_21476826
WTC11_00025554	chr14	-	1797	9	FSM	ENSG00000165819.12	ENST00000544500.5	1789	9	0	-8	0	0	multi-exon	FALSE	canonical	3	314	junction_2	73.8372365409216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21494510	False	NA	-11	True	AATAAA	-21	NA	21503829	21498137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172
WTC11_00025555	chr14	-	1985	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	-5	0	0	multi-exon	FALSE	canonical	3	314	junction_2	74.5601099784597	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCATTCTGGCTCTGCT	-21502021	True	NA	-6	True	AATAAA	-26	NA	21511340	21498132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
WTC11_00025556	chr14	-	2054	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	-24	0	0	multi-exon	FALSE	canonical	3	24	junction_7	143.148545828589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21502021	True	NA	-11	True	AATAAA	-21	NA	21511340	21498137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
WTC11_00025557	chr14	-	2135	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	-11	0	0	multi-exon	FALSE	canonical	3	36	junction_6	147.543002206136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-21501991	True	NA	-35	True	TTTAAA	-1	NA	21511310	21498161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
WTC11_00025562	chr14	-	801	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTGTTGCCCAGGCTG	-21502021	True	NA	NA	False	AATAAA	-12	NA	21511340	21507651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21508236_21511123
WTC11_00025563	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21516848	True	NA	-4	True	ATTAAA	-16	NA	21526346	21521079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21525655_21526060
WTC11_00025564	chr14	-	1569	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	-3	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21536895	False	10041	-4	True	ATTAAA	-16	NA	21536934	21521079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21522245_21525336_21525655_21536848
WTC11_00025565	chr14	-	4943	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	-1	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21527175	True	NA	-4	True	ATTAAA	-16	NA	21537216	21521079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21525655_21536848
WTC11_00025568	chr14	-	3178	4	FSM	ENSG00000165821.12	ENST00000450879.2	3178	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	152.918278828922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGGGCTTGCTGGTACC	-21516729	True	NA	NA	False	NA	NA	NA	21526227	21521650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21522245_21522832_21524932_21525336_21525655_21526060
WTC11_00025570	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1026.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568733	True	NA	-6	True	ATTAAA	-20	NA	22589220	22564906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22565138_22575058_22575234_22589035
WTC11_00025571	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	117.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568737	True	NA	-6	True	ATTAAA	-20	NA	22589224	22564906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22565138_22575058_22575234_22588946
WTC11_00025572	chr14	-	694	1	FSM	ENSG00000258458.8	ENST00000672139.1	1134	1	131	309	131	262	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCCCATCTCTTAAA	-22764788	False	NA	NA	False	NA	NA	NA	22764816	22764122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22764100_22764800
WTC11_00025573	chr14	-	2360	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	90	-3	90	0	multi-exon	FALSE	canonical	2	5	junction_2	4.15739709641549	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	-22815689	False	NA	-3	True	AATAAA	-17	NA	22815713	22773221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
WTC11_00025574	chr14	-	10003	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	4	0	-4	multi-exon	FALSE	canonical	3	77	junction_11	55.4387555894049	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTCCTGGGAGTGAGG	-22915461	True	NA	NA	False	AATAAA	-15	NA	22919149	22893207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
WTC11_00025575	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	34.2121648280582	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	-22915494	True	NA	-32	True	CATAAA	-41	NA	22919182	22900765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
WTC11_00025587	chr14	-	686	5	FSM	ENSG00000100462.16	ENST00000476175.6	682	5	0	-4	0	0	multi-exon	FALSE	canonical	3	64	junction_1	408.241043992394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22922791	False	NA	-2	True	AATAAA	-24	NA	22922821	22920524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22920732_22920839_22921057_22922175_22922241_22922442_22922560_22922741
WTC11_00025589	chr14	-	2308	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	-4	0	0	multi-exon	FALSE	canonical	3	754	junction_14	81.1553053949648	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920517	True	NA	-2	True	AATAAA	-24	NA	22929376	22920524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
WTC11_00025590	chr14	-	2276	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	-5	0	0	multi-exon	FALSE	canonical	3	50	junction_14	293.933098964146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920532	True	NA	-2	True	AATAAA	-24	NA	22929391	22920524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
WTC11_00025591	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	210.789281259152	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920542	True	NA	-2	True	AATAAA	-24	NA	22929401	22920524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
WTC11_00025601	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	40.8275506109403	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953208	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
WTC11_00025602	chr14	-	1482	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	-8	0	0	multi-exon	FALSE	canonical	3	82	junction_5	77.6140290153784	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953247	True	NA	-24	True	AATAAA	-20	NA	22957129	22946227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
WTC11_00025603	chr14	-	1642	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	57.2139152546427	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953272	True	NA	-24	True	AATAAA	-20	NA	22957154	22946227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
WTC11_00025604	chr14	-	1746	10	NNC	ENSG00000092036.19	novel	1642	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_9	81.4466423835603	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953245	True	NA	-24	True	AATAAA	-20	NA	22957127	22946227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956792
WTC11_00025605	chr14	-	1736	10	NIC	ENSG00000092036.19	novel	1586	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	41	junction_9	70.3916731888154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATTTTAGTCATTTTC	-22953191	True	NA	-27	True	AATAAA	-17	NA	22957073	22946230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
WTC11_00025609	chr14	-	4168	8	FSM	ENSG00000129474.16	ENST00000262713.7	4168	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	9.87679200996777	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGTGTAACTTTACA	-22978676	True	NA	-1	True	ATTAAA	-38	NA	22982551	22971176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644_22976713_22978343_22978446_22981260
WTC11_00025611	chr14	-	4585	6	ISM	ENSG00000100802.15	ENST00000299088.11	3360	7	9487	-14	2113	14	3prime_fragment	FALSE	canonical	3	34	junction_5	12.1655250605964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTTTTCAACTTTACGA	-23000234	False	NA	NA	False	NA	NA	NA	23000656	22985879	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426
WTC11_00025612	chr14	-	1776	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	21.5832512540136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAATGAGATGCTC	-23009700	False	NA	36	True	GGGGCT	-2	NA	23010122	22987144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
WTC11_00025613	chr14	-	1968	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	-468	125	-468	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGATTGAAGATCTT	-23007169	False	NA	NA	False	NA	NA	NA	23007591	23005623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23005600_23007600
WTC11_00025614	chr14	-	1135	1	FSM	ENSG00000279656.1	ENST00000624870.1	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTTGATATCCTCCT	-23024188	False	NA	NA	False	NA	NA	NA	23024217	23023082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23023100_23024200
WTC11_00025615	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3047	junction_2	58.5	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-23015350	True	NA	-6	True	NA	NA	NA	23034900	23025855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23033367_23033675_23034683
WTC11_00025616	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1345.9323905754	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015340	True	NA	-8	True	NA	NA	NA	23034890	23025857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
WTC11_00025617	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015344	True	NA	-8	True	NA	NA	NA	23034894	23025857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23034683
WTC11_00025618	chr14	-	899	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	1	0	1	0	multi-exon	FALSE	canonical	3	45	junction_2	1559.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	-23035167	True	NA	-15	True	NA	NA	NA	23035229	23025901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23033367_23033675_23035111
WTC11_00025621	chr14	-	3418	13	FSM	ENSG00000139880.21	ENST00000487137.7	3415	13	0	-3	0	-2	multi-exon	FALSE	canonical	3	30	junction_5	10.2048463432278	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCCCTGCTTCTGTTTTT	-23056245	True	NA	-2	True	AATAAA	-24	NA	23057520	23047063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
WTC11_00025622	chr14	-	3543	12	FSM	ENSG00000100813.15	ENST00000473758.5	3540	12	0	-3	0	0	multi-exon	FALSE	canonical	3	9	junction_11	208.978507337299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23065793	False	3732	-3	True	AATAAA	-20	NA	23069525	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23067313_23068672_23069475
WTC11_00025624	chr14	-	2408	12	NIC	ENSG00000100813.15	novel	2445	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_11	162.884992129898	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067825	True	NA	-3	True	AATAAA	-20	NA	23071557	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071426
WTC11_00025625	chr14	-	2467	13	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_12	171.429832584647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067822	True	NA	-3	True	AATAAA	-20	NA	23071554	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
WTC11_00025626	chr14	-	2448	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	-3	0	0	multi-exon	FALSE	canonical	3	81	junction_11	132.429054763124	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067829	True	NA	-3	True	AATAAA	-20	NA	23071561	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
WTC11_00025628	chr14	-	2548	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	18	-3	18	0	multi-exon	FALSE	canonical	3	76	junction_12	148.522070937472	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067867	True	NA	-3	True	AATAAA	-20	NA	23071599	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
WTC11_00025629	chr14	-	4818	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	0	-3	0	0	multi-exon	FALSE	canonical	3	116	junction_15	156.21318943557	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	23095614	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
WTC11_00025630	chr14	-	4938	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	-3	0	0	multi-exon	FALSE	canonical	3	76	junction_15	168.303380173358	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	23095614	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
WTC11_00025631	chr14	-	4173	19	FSM	ENSG00000100813.15	ENST00000555053.5	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	182.613198446645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGGTCTTTCACATC	-23095248	False	NA	NA	False	NA	NA	NA	23095383	23059058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
WTC11_00025645	chr14	-	4242	12	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	0	42859	intron_retention	FALSE	non_canonical	0	0	junction_1	1190.09620418125	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCTCTAATACATAAAA	-23142229	True	NA	NA	False	NA	NA	NA	23183641	23082435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23082461_23125294_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
WTC11_00025646	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	3847	junction_2	128.382864900266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	-23142248	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
WTC11_00025653	chr14	-	4977	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	13	-4	-2	4	multi-exon	FALSE	canonical	3	37	junction_1	0	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGAGTCTCGCTCTGTC	-23285270	True	NA	NA	False	NA	NA	NA	23286119	23272417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23277188_23285912
WTC11_00025654	chr14	-	719	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-2	109	-2	-109	5prime_fragment	FALSE	canonical	3	61	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	-23285270	True	NA	-7	True	ATTAAA	-20	NA	23286119	23285099	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_23285612_23285912
WTC11_00025655	chr14	-	2296	9	FSM	ENSG00000092096.19	ENST00000206544.8	2284	9	0	-12	0	8	multi-exon	FALSE	canonical	3	62	junction_2	48.164918509222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTCCCTTCTGTTT	-23347507	False	NA	-7	True	AATAAA	-34	NA	23352551	23346305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947
WTC11_00025656	chr14	-	2708	10	FSM	ENSG00000092096.19	ENST00000354772.10	2372	10	-21	-315	0	311	multi-exon	TRUE	canonical	3	127	junction_6	30.9591526983939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGCAAAAAGGGAATTAT	-23347864	True	NA	-11	True	AATAAA	-18	NA	23352908	23346002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
WTC11_00025657	chr14	-	2253	9	FSM	ENSG00000092096.19	ENST00000397260.7	2245	9	0	-8	0	8	multi-exon	FALSE	canonical	3	18	junction_7	59.3083836822418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTCCCTTCTGTTT	-23347816	True	NA	-7	True	AATAAA	-34	NA	23352860	23346305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351947_23352452_23352645
WTC11_00025659	chr14	-	3291	10	FSM	ENSG00000092096.19	ENST00000397267.6	2455	10	-525	-311	-525	311	multi-exon	FALSE	canonical	3	62	junction_2	45.4193084518789	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGCAAAAAGGGAATTAT	NA	False	NA	-11	True	AATAAA	-18	NA	23353437	23346002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
WTC11_00025663	chr14	-	3777	6	FSM	ENSG00000100842.13	ENST00000216733.8	2653	6	-1119	-5	-539	2	multi-exon	TRUE	canonical	3	87	junction_5	13.9942845476287	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGACATTTGCTGGTGAT	-23364095	True	NA	-11	True	AATAAA	-19	NA	23366291	23356400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23360554_23360834_23365007
WTC11_00025665	chr14	-	9303	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_4	9.81432563421048	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-23551660	False	NA	-1	True	AATACA	-33	NA	23551772	23520856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
WTC11_00025666	chr14	-	660	2	FSM	ENSG00000213983.12	ENST00000554892.1	658	2	0	-2	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-23560287	False	NA	-14	True	AATAAA	-35	NA	23560311	23559564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937
WTC11_00025669	chr14	-	2600	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	-2	0	0	multi-exon	FALSE	canonical	3	220	junction_21	70.0703566087932	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-23564710	True	NA	-14	True	AATAAA	-35	NA	23567791	23559564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
WTC11_00025670	chr14	-	3298	21	FSM	ENSG00000213983.12	ENST00000308724.9	3298	21	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_17	64.8013117151189	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-23568060	False	NA	-14	True	AATAAA	-35	NA	23568070	23559564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
WTC11_00025671	chr14	-	1207	6	ISM	ENSG00000213983.12	ENST00000465445.6	2554	18	4963	-45	45	0	intron_retention	FALSE	canonical	3	319	junction_5	52.3335456471277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23562337	False	NA	-16	True	AATAAA	-33	NA	23562361	23559566	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961
WTC11_00025672	chr14	-	2558	18	FSM	ENSG00000213983.12	ENST00000465445.6	2554	18	0	-4	0	0	multi-exon	FALSE	canonical	3	35	junction_17	135.831235610496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	-23567313	False	NA	-57	True	NA	NA	NA	23567324	23559607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23564222_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23566063_23566161_23566277_23566420_23567110
WTC11_00025674	chr14	-	7137	27	Fusion	ENSG00000213983.12_ENSG00000092051.18	novel	2598	22	NA	NA	-69	0	multi-exon	FALSE	canonical	3	141	junction_26	80.3490904202465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	-23577318	True	NA	-57	True	NA	NA	NA	23578859	23559607	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
WTC11_00025699	chr14	-	4494	6	FSM	ENSG00000092051.18	ENST00000356300.9	4265	6	-26	-203	-26	203	multi-exon	FALSE	canonical	3	141	junction_5	50.7133118618771	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGAGGGAAGGACCGCA	-23577275	True	NA	NA	False	NA	NA	NA	23578816	23567834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
WTC11_00025700	chr14	-	4386	7	FSM	ENSG00000092051.18	ENST00000397118.7	4386	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	108.316921833828	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGATTGTCATCTCC	-23577244	True	NA	-4	True	AATAAA	-14	NA	23578785	23568037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23577868_23577995_23578179
WTC11_00025702	chr14	-	3032	2	FSM	ENSG00000215256.5	ENST00000666884.1	3031	2	13	-14	3	-3	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTGAGTTTTGTGTC	-23953271	True	NA	-9	True	AATAAA	-21	NA	23954180	23938733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953573
WTC11_00025704	chr14	-	878	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	-6	0	0	multi-exon	FALSE	canonical	3	26	junction_4	154.180089505746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	-24140586	False	4372	-4	True	AATAAA	-21	NA	24141570	24138958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
WTC11_00025705	chr14	-	959	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	-6	0	0	multi-exon	FALSE	canonical	3	347	junction_2	28.3460755661167	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	-24140601	False	4372	-4	True	AATAAA	-21	NA	24141585	24138958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
WTC11_00025706	chr14	-	844	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	-6	0	0	multi-exon	FALSE	canonical	3	213	junction_5	70.7021923281025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	-24140607	False	4372	-4	True	AATAAA	-21	NA	24141591	24138958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
WTC11_00025710	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	507.059277709334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142233	True	NA	-21	True	AATAAA	-21	NA	24146605	24143364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
WTC11_00025711	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_6	162.041229321429	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142238	True	NA	-21	True	AATAAA	-21	NA	24146610	24143364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
WTC11_00025712	chr14	-	1736	8	FSM	ENSG00000100911.16	ENST00000559453.5	1721	8	0	-15	0	0	multi-exon	FALSE	canonical	3	1223	junction_5	177.122003380813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCCTTCTGGCGTGTGT	-24145254	False	NA	-23	True	AATAAA	-19	NA	24146238	24143366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24145156_24145242_24145274_24145378_24145466_24145709
WTC11_00025713	chr14	-	1525	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	-23	0	0	multi-exon	TRUE	canonical	3	45	junction_9	502.1080063094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATGTTGTGTGGATTC	-24146251	True	NA	-38	True	AATAAA	-4	NA	24147235	24143381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
WTC11_00025721	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_25	36.9999839316095	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24180324	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
WTC11_00025722	chr14	-	1865	15	FSM	ENSG00000196497.17	ENST00000561462.5	1864	15	0	-1	0	0	multi-exon	FALSE	canonical	2	10	junction_1	106.725759566761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24176183	False	NA	-14	True	AATAAA	-28	NA	24184675	24180218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180682_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649
WTC11_00025724	chr14	-	4351	31	FSM	ENSG00000259522.3	ENST00000561419.1	4351	31	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_30	52.3911464106505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCACCTCTCAGCCCA	-24187987	False	NA	NA	False	AATAGA	-15	NA	24190416	24180394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718_24189809_24190379
WTC11_00025730	chr14	-	2441	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	-241	0	5	0	multi-exon	FALSE	canonical	3	158	junction_2	29.5499576987853	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-24193253	True	NA	-9	True	AATAAA	-16	NA	24195682	24189148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
WTC11_00025733	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	30.4333287696236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	-24193189	True	NA	-16	True	AATAAA	-12	NA	24195618	24190041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
WTC11_00025736	chr14	-	882	3	FSM	ENSG00000100926.15	ENST00000525592.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	115.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGTGTTTTTACTG	-24193258	False	NA	5	True	NA	NA	NA	24195687	24192887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24193270_24194674_24195037_24195549
WTC11_00025738	chr14	-	980	6	FSM	ENSG00000254505.11	ENST00000347519.12	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	12.7027556065603	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTCTATACTGCCT	-24207721	True	NA	-34	True	AATAAA	-16	NA	24213488	24209614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408
WTC11_00025739	chr14	-	2130	10	FSM	ENSG00000260669.2	ENST00000565988.1	2108	10	0	-22	0	22	multi-exon	FALSE	canonical	3	135	junction_9	262.805800713928	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGAATCCTAGTGTCT	-24213508	True	NA	-43	True	AATAAA	-7	NA	24215974	24209623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408_24214152_24214309_24214396_24214491_24214600_24215551_24215798_24215918
WTC11_00025740	chr14	-	2102	4	FSM	ENSG00000260669.2	ENST00000528804.1	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	7.84573486395988	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAG	-24213521	True	NA	NA	False	ACTAAA	-6	NA	24215987	24212738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214600_24215551_24215663_24215736_24215798_24215918
WTC11_00025741	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213571	True	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
WTC11_00025742	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	6.8818602136341	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213600	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
WTC11_00025743	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	59.1370230904465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213599	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
WTC11_00025744	chr14	-	758	6	NIC	ENSG00000213920.9	novel	723	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	49.1837371495904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213587	True	NA	-9	True	ATTAAA	-31	NA	24216053	24213942	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24214152_24214261_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
WTC11_00025746	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1845.066274028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204015	True	NA	-17	True	AATAAA	-22	NA	24232303	24216856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
WTC11_00025747	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_3	160.188083895845	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204079	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
WTC11_00025748	chr14	-	712	4	FSM	ENSG00000129559.13	ENST00000527046.5	847	4	135	0	135	0	multi-exon	FALSE	canonical	3	62	junction_3	1949.74818886953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCTTCTGTTGCACA	-24231849	False	NA	-19	True	AATAAA	-20	NA	24231867	24216858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651
WTC11_00025749	chr14	-	655	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	-4	0	-3	multi-exon	FALSE	canonical	3	36	junction_4	2074.19845964652	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATCTTTCTTCTGTTGC	-24204037	True	NA	-22	True	AATAAA	-17	NA	24232325	24216861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
WTC11_00025752	chr14	-	653	3	FSM	ENSG00000129559.13	ENST00000524927.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_2	119.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTAAAGTTAGAAGAAA	-24204066	True	NA	NA	False	NA	NA	NA	24232354	24217715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24218216_24218383_24218432_24232249
WTC11_00025754	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	65.1843539509291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240706	True	NA	-7	True	ATTAAA	-18	NA	24242623	24239642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
WTC11_00025755	chr14	-	2161	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	7	0	7	0	multi-exon	FALSE	canonical	3	185	junction_3	13.42236938845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240739	True	NA	-7	True	ATTAAA	-18	NA	24242656	24239642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
WTC11_00025756	chr14	-	1876	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_2	60.6333914874082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	-24240688	True	NA	-46	True	AATGAA	-45	NA	24242605	24239681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
WTC11_00025757	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	100.943328435095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	-24240696	True	NA	-46	True	AATGAA	-45	NA	24242613	24239681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
WTC11_00025759	chr14	-	290	2	FSM	ENSG00000092330.18	ENST00000557830.1	574	2	0	284	0	55	multi-exon	FALSE	canonical	3	206	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACTGGTTTGAAGGCT	-24242056	False	NA	NA	False	NA	NA	NA	24242077	24241674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24241777_24241889
WTC11_00025760	chr14	-	735	3	FSM	ENSG00000100949.15	ENST00000561055.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24266306	False	NA	-2	True	AATAAA	-29	NA	24267708	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266890_24267659
WTC11_00025761	chr14	-	1943	17	NIC	ENSG00000100949.15	novel	1946	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	32.4542346042855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270113	True	NA	-2	True	AATAAA	-29	NA	24271515	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271249_24271486
WTC11_00025762	chr14	-	1916	17	NIC	ENSG00000100949.15	novel	1946	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	35.3663306514826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270114	True	NA	-2	True	AATAAA	-29	NA	24271516	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270999_24271112_24271170_24271486
WTC11_00025763	chr14	-	1930	17	FSM	ENSG00000100949.15	ENST00000216840.11	1946	17	16	0	2	0	multi-exon	FALSE	canonical	3	65	junction_16	21.641612116476	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270179	True	NA	-2	True	AATAAA	-29	NA	24271581	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
WTC11_00025764	chr14	-	2247	16	FSM	ENSG00000100949.15	ENST00000399409.7	2265	16	18	0	2	0	multi-exon	FALSE	canonical	3	91	junction_12	16.7788226311887	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270179	True	NA	-2	True	AATAAA	-29	NA	24271581	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112
WTC11_00025765	chr14	-	768	4	FSM	ENSG00000100949.15	ENST00000558649.5	768	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	8.17856276425687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACCCGTCACCCTGAGC	-24266984	False	NA	NA	False	NA	NA	NA	24268386	24266604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24266890_24267659_24267777_24267869_24267959_24268109
WTC11_00025769	chr14	-	539	1	FSM	ENSG00000157379.14	ENST00000559084.1	528	1	-13	2	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTTTGACTGCTGA	-24290455	False	NA	-6	True	AATAAA	-18	NA	24291138	24290599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290600_24291100
WTC11_00025772	chr14	-	1425	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	2	0	0	multi-exon	FALSE	canonical	3	47	junction_4	9.10957600550102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTTTGACTGCTGA	-24299097	True	NA	-6	True	AATAAA	-18	NA	24299780	24290599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
WTC11_00025775	chr14	-	1602	5	FSM	ENSG00000136305.12	ENST00000554411.6	1225	5	-286	-91	-286	91	multi-exon	TRUE	canonical	3	31	junction_2	2.6809513236909	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTCAAGTATGGAGT	-24307951	False	NA	90	True	NA	NA	NA	24308263	24305095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817
WTC11_00025776	chr14	-	2294	7	FSM	ENSG00000136305.12	ENST00000258807.5	2294	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	4.14996653266291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	-24311110	True	NA	-1	True	AATAAA	-23	NA	24311422	24305186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307921_24308478_24308831_24310648
WTC11_00025777	chr14	-	1057	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	-16	0	0	multi-exon	FALSE	canonical	3	79	junction_2	155.857484759493	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24442411	False	107	-12	True	AATAAA	-19	NA	24442448	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
WTC11_00025778	chr14	-	1587	4	NIC	ENSG00000100445.18	novel	1507	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	16	junction_3	191.906806086241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24442654	False	NA	-12	True	AATAAA	-19	NA	24442691	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442097
WTC11_00025780	chr14	-	1507	5	FSM	ENSG00000100445.18	ENST00000544691.6	1507	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	55.5112601190065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345
WTC11_00025781	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	104.542814195907	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
WTC11_00025782	chr14	-	1974	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	-14	0	0	multi-exon	FALSE	canonical	3	394	junction_2	26.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673
WTC11_00025783	chr14	-	1234	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	153.326579561405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436682	True	NA	-12	True	AATAAA	-19	NA	24442808	24439765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24440493_24440782_24440927_24441677_24441796_24442177_24442261_24442345_24442453_24442753
WTC11_00025785	chr14	-	1420	3	FSM	ENSG00000100445.18	ENST00000556707.5	1196	3	-224	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	206.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAGGCAATAAAAATAAAT	-24442640	False	NA	-43	True	NA	NA	NA	24442677	24439796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24442097
WTC11_00025786	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	176.143939719764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	-24436639	True	NA	NA	False	NA	NA	NA	24442765	24439901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
WTC11_00025787	chr14	-	1462	4	FSM	ENSG00000100445.18	ENST00000554947.5	1203	4	82	-341	0	0	multi-exon	FALSE	canonical	3	296	junction_3	62.5513122697411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAGGCAATAAAAATAAAT	-24442640	False	NA	-43	True	NA	NA	NA	24442677	24439796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177
WTC11_00025788	chr14	-	993	5	FSM	ENSG00000100445.18	ENST00000555225.5	769	5	-224	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	160.356633788565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAAGGTGATCCCAC	-24442640	False	NA	NA	False	NA	NA	NA	24442677	24440176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441677_24441796_24442177_24442261_24442345
WTC11_00025789	chr14	-	934	3	FSM	ENSG00000100445.18	ENST00000555355.5	934	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	49	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACAGCGTGCCATCATGC	-24442229	False	6126	NA	False	NA	NA	NA	24442266	24440203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440927_24441673_24441796_24442177
WTC11_00025793	chr14	-	4018	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-2	174	-2	28	multi-exon	FALSE	canonical	3	34	junction_5	10.8185026690388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTATAAAACACTACCAAAT	-25049587	True	NA	26	True	NA	NA	NA	25050149	24809627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
WTC11_00025794	chr14	-	4021	7	FSM	ENSG00000168952.16	ENST00000396700.5	4021	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.1088341484633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGCAGTTAT	-25049502	True	NA	-2	True	ATTAAA	-20	NA	25050064	24809655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25010524_25010641_25049877
WTC11_00025795	chr14	-	6984	5	FSM	ENSG00000139910.20	ENST00000539517.7	6990	5	0	6	0	-3	multi-exon	TRUE	canonical	3	11	junction_1	14.6116391962025	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATTAGTTTTAATTAT	-26598023	False	36	NA	False	AATAAA	-19	NA	26598033	26443095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26448964_26472319_26472392_26479976_26480144_26595409_26595554_26597300
WTC11_00025796	chr14	-	2002	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	-863	-243	-270	243	multi-exon	FALSE	canonical	3	22	junction_1	11.2333209693305	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAACACTTTGGAAGG	NA	False	NA	NA	False	TATAAA	-27	NA	26598303	26469874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
WTC11_00025797	chr14	-	947	4	FSM	ENSG00000139910.20	ENST00000547619.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	10.3387082795139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAAATTGAGCAAAGGT	-26597485	False	NA	NA	False	NA	NA	NA	26597495	26471950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26472392_26479976_26480144_26595409_26595554_26597300
WTC11_00025799	chr14	-	3890	19	FSM	ENSG00000184304.17	ENST00000415220.6	3189	19	-238	-463	-33	0	multi-exon	FALSE	canonical	2	4	junction_16	7.09372875533883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCCACCTCATTGAA	-29927384	True	NA	0	True	AATAAA	-18	NA	29927880	29576478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29656475_29656500_29663698_29663860_29666076_29666209_29725535_29725675_29927248
WTC11_00025801	chr14	-	532	1	FSM	ENSG00000258648.1	ENST00000557130.1	554	1	87	-65	87	65	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTCTGTATAGACTC	-30683495	False	NA	NA	False	NA	NA	NA	30683511	30682979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30683000_30683500
WTC11_00025804	chr14	-	4687	17	NIC	ENSG00000196792.12	novel	4195	18	NA	NA	-129	477	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	21.2481616851906	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAAATTAGCCGGGCGT	-31026520	False	44	NA	False	ACTAAA	-10	NA	31026530	30893321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30929200_30929312_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
WTC11_00025805	chr14	-	4200	18	FSM	ENSG00000196792.12	ENST00000357479.10	4195	18	0	-5	0	0	multi-exon	FALSE	canonical	3	16	junction_10	24.7207238334805	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGAGTCCTTCATTTT	-31023099	True	NA	-34	True	ATTAAA	-18	NA	31026379	30893798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30918965_30919107_30929200_30929312_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
WTC11_00025807	chr14	-	3748	18	ISM	ENSG00000092148.14	ENST00000611816.5	9322	43	79811	-8	833	5	3prime_fragment	FALSE	canonical	3	33	junction_16	53.5854909867462	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCATGTGACTATTTC	-31127842	False	NA	2	True	ATTAAA	-20	NA	31127868	31100111	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919_31123048_31127784
WTC11_00025808	chr14	-	9448	43	FSM	ENSG00000092148.14	ENST00000399332.6	9445	43	0	-3	0	3	multi-exon	FALSE	canonical	3	37	junction_42	54.4275350899131	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTCATGTGACTATT	-31203561	True	NA	0	True	ATTAAA	-18	NA	31207793	31100113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
WTC11_00025809	chr14	-	4285	17	FSM	ENSG00000092148.14	ENST00000555843.5	4281	17	0	-4	0	3	multi-exon	FALSE	canonical	3	33	junction_16	54.1303043012876	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTCATGTGACTATT	-31123642	False	NA	0	True	ATTAAA	-18	NA	31123670	31100113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919
WTC11_00025811	chr14	-	9411	43	NIC	ENSG00000092148.14	novel	9445	43	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_42	54.7598188008511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTGTCATGTGAC	-31207891	False	NA	-4	True	ATTAAA	-14	NA	31207901	31100117	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129308_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
WTC11_00025820	chr14	-	7814	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_35	17.9036879110514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTTAAATTATTTT	-31419272	True	NA	1	True	AATAAA	-21	NA	31420550	31291784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
WTC11_00025821	chr14	-	5237	28	FSM	ENSG00000129493.15	ENST00000538864.6	5237	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.7004214806899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATCCCTGTAATTCCAG	NA	False	NA	NA	False	TTTAAA	-25	NA	31387191	31292866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119
WTC11_00025822	chr14	-	2687	17	FSM	ENSG00000129493.15	ENST00000550366.5	2687	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	12.1306365764539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAATGAAAAAAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	31387283	31323591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386528_31387119
WTC11_00025823	chr14	-	508	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	64.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTCCTGTTGTATTTT	-31419253	True	NA	NA	False	ATTAAA	-20	NA	31420531	31400264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31400513_31402849_31403050_31420471
WTC11_00025825	chr14	-	761	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	-12	0	12	multi-exon	FALSE	non_canonical	1	4	junction_1	19.6129209111409	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACAAATTATTTGGGT	-31455153	True	NA	-25	True	NA	NA	NA	31457376	31427494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
WTC11_00025826	chr14	-	2837	3	FSM	ENSG00000129480.13	ENST00000549850.1	823	3	112	-2126	49	0	multi-exon	FALSE	canonical	3	50	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	-31455153	True	NA	-5	True	AATAAA	-20	NA	31457376	31446035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31448455_31453274_31453345_31457028
WTC11_00025827	chr14	-	2695	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	18	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	-31455265	True	NA	-5	True	AATAAA	-20	NA	31457488	31446035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31448455_31453274_31453345_31457282
WTC11_00025828	chr14	-	2531	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	179	-862	179	862	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGCTGTACTGGATAA	-32076251	True	NA	NA	False	AATAAA	-14	NA	32076614	32074083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32074100_32076600
WTC11_00025829	chr14	-	216	1	FSM	ENSG00000202337.1	ENST00000365467.1	107	1	0	-109	0	109	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGTGAAATCTATG	NA	False	NA	-5	True	NA	NA	NA	32203269	32203053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32203100_32203300
WTC11_00025830	chr14	-	435	1	FSM	ENSG00000259086.3	ENST00000556746.2	445	1	-1	11	-1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAATGAGTAAGTGTAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	32272302	32271867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32271900_32272300
WTC11_00025831	chr14	-	2707	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	-1	0	1	multi-exon	FALSE	canonical	3	65	junction_3	5.76085931090146	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTCTAATGGTTTGAT	-33948377	True	NA	-8	True	AATAAA	-16	NA	33951074	33924225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
WTC11_00025832	chr14	-	864	4	FSM	ENSG00000129521.15	ENST00000556785.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	6.16441400296898	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTGGTAGATGCCACA	NA	False	NA	NA	False	AAGAAA	-5	NA	33931336	33925510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095
WTC11_00025833	chr14	-	2689	1	FSM	ENSG00000129521.15	ENST00000547327.2	2849	1	2	158	2	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAATTAGAACCAAATGCA	-33948382	True	NA	NA	False	GATAAA	-27	NA	33951079	33948390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33948400_33951100
WTC11_00025834	chr14	-	2888	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	-76	-150	-76	150	multi-exon	FALSE	canonical	3	674	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCATTGATCAACTCT	-34448513	True	NA	-29	True	AATAAA	-3	NA	34462316	34432637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34435305_34462095
WTC11_00025836	chr14	-	538	3	Genic_Genomic	ENSG00000240463.1	novel	441	1	NA	NA	0	110028	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	34569129	34458660	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_34458688_34486589_34486623_34568651
WTC11_00025837	chr14	-	544	3	Genic_Genomic	ENSG00000240463.1	novel	441	1	NA	NA	-9	110026	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAGTGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	34569138	34458662	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_34458688_34486589_34486622_34568651
WTC11_00025838	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	33.9682204420544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-34535175	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
WTC11_00025841	chr14	-	3399	13	FSM	ENSG00000129515.20	ENST00000396526.7	3398	13	0	-1	0	0	multi-exon	FALSE	canonical	3	642	junction_2	80.484988248327	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTAAATGTTGTG	-34623172	True	NA	NA	False	ACTAAA	-20	NA	34630109	34561092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906
WTC11_00025842	chr14	-	3282	14	FSM	ENSG00000129515.20	ENST00000362031.10	3282	14	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_13	99.8392198611608	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTAAATGTTGTG	-34623211	True	NA	NA	False	ACTAAA	-20	NA	34630148	34561092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
WTC11_00025843	chr14	-	2215	14	ISM	ENSG00000129515.20	ENST00000556162.6	1855	15	57	-257	8	257	3prime_fragment	FALSE	canonical	2	5	junction_9	286.595668011708	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCAGGTCTTAGTTTTT	-34623164	True	NA	-6	True	AATAAA	-23	NA	34630101	34562402	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906
WTC11_00025846	chr14	-	441	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCATGCTGGGTTAA	NA	False	NA	-54	True	NA	NA	NA	34569129	34568688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34568700_34569100
WTC11_00025849	chr14	-	4715	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	-339	-70	-109	70	multi-exon	FALSE	canonical	3	84	junction_2	21.6999743983464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATACACACATACACACA	-34714904	True	NA	NA	False	NA	NA	NA	34714932	34709042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
WTC11_00025850	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	55.7155474012615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	-34714795	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
WTC11_00025854	chr14	-	498	1	FSM	ENSG00000243824.1	ENST00000495231.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	34740833	34740335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34740300_34740800
WTC11_00025855	chr14	-	5775	26	FSM	ENSG00000198604.11	ENST00000382422.6	5775	26	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_16	18.5531021664842	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAATTCTCTAATTTT	-34874914	False	NA	NA	False	AATAAA	-19	NA	34874932	34752731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491
WTC11_00025856	chr14	-	5731	27	FSM	ENSG00000198604.11	ENST00000360310.6	5729	27	0	-2	0	2	multi-exon	TRUE	canonical	1	24	junction_16	18.9904990259455	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTCTAATTTTTAC	-34875342	False	NA	NA	False	AATAAA	-22	NA	34875360	34752728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
WTC11_00025857	chr14	-	5922	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	-2	0	2	multi-exon	FALSE	canonical	1	24	junction_15	22.784205055257	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTCTAATTTTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	34875647	34752728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
WTC11_00025858	chr14	-	689	4	FSM	ENSG00000198604.11	ENST00000556314.2	673	4	0	-16	0	16	multi-exon	FALSE	canonical	3	97	junction_2	10.4986771653491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCTTTCATTTGTGA	-34785960	False	NA	-19	True	AATAAA	-33	NA	34785974	34780099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34780311_34783118_34783233_34783761_34783928_34785776
WTC11_00025860	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-34982209	True	NA	NA	False	NA	NA	NA	34982532	34963707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34964041_34969169_34969308_34982423
WTC11_00025861	chr14	-	1516	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	-5	0	0	multi-exon	FALSE	canonical	3	258	junction_12	31.1644384230203	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-35120453	True	NA	3	True	AATAAA	-31	NA	35121990	35085466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
WTC11_00025862	chr14	-	1402	12	FSM	ENSG00000092020.11	ENST00000553273.5	1402	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	121.955146882941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-35122239	False	NA	3	True	AATAAA	-31	NA	35122261	35085466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
WTC11_00025863	chr14	-	1725	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	-6	0	0	multi-exon	FALSE	canonical	3	70	junction_11	90.8625335328044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-35122425	False	NA	3	True	AATAAA	-31	NA	35122447	35085466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
WTC11_00025864	chr14	-	1224	5	ISM	ENSG00000092020.11	ENST00000553273.5	1402	12	24910	5	-2166	0	3prime_fragment	FALSE	canonical	3	8	junction_3	147.481142862401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	NA	False	NA	-2	True	AATAAA	-26	NA	35097351	35085471	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35085779_35087950_35088011_35091069_35091208_35096557_35096634_35096708
WTC11_00025865	chr14	-	1854	14	NIC	ENSG00000092020.11	novel	1846	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_13	60.5876547270601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAAAGCAAAATCCT	-35121629	True	NA	-66	True	NA	NA	NA	35122517	35085535	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
WTC11_00025866	chr14	-	1846	12	FSM	ENSG00000092020.11	ENST00000557217.5	1846	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	79.2068116279431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAAAGCAAAATCCT	-35121629	True	NA	-66	True	NA	NA	NA	35122517	35085535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901
WTC11_00025867	chr14	-	1349	5	FSM	ENSG00000092020.11	ENST00000555644.5	1347	5	0	-2	0	2	multi-exon	FALSE	canonical	3	258	junction_4	23.2849200127464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATACTAGCTGTCCCT	-35122291	False	NA	NA	False	AATAAA	-22	NA	35122313	35107645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
WTC11_00025869	chr14	-	1562	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	-3	0	3	multi-exon	FALSE	canonical	3	111	junction_5	19.5959179422654	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCCTGATCATTTTCTT	-35403152	True	NA	-11	True	ATTAAA	-18	NA	35404749	35401509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
WTC11_00025870	chr14	-	1542	5	FSM	ENSG00000100906.11	ENST00000557389.1	1537	5	0	-5	0	0	multi-exon	FALSE	canonical	3	115	junction_4	17.3205080756888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	-35404090	False	NA	3	True	NA	NA	NA	35404140	35401539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689
WTC11_00025871	chr14	-	690	3	FSM	ENSG00000100906.11	ENST00000555371.1	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGGTGTACTTATAT	-35403188	False	206	NA	False	AAAAAG	-37	NA	35403238	35401925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402061_35402393_35402860_35403149
WTC11_00025872	chr14	-	1494	3	ISM	ENSG00000174373.17	ENST00000389698.7	7864	41	259989	4	-6713	0	3prime_fragment	FALSE	canonical	3	32	junction_2	3.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGTGTTGATTTGTC	NA	False	NA	-10	True	AATAAA	-21	NA	35549237	35538355	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35539691_35548507_35548539_35549109
WTC11_00025873	chr14	-	605	4	ISM	ENSG00000174373.17	ENST00000554573.5	2358	10	21566	32228	21566	-6207	internal_fragment	FALSE	canonical	3	39	junction_3	4.98887651569859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTACTCACAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	35605710	35570579	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35570745_35572559_35572719_35595633_35595790_35605585
WTC11_00025874	chr14	-	3543	20	ISM	ENSG00000174373.17	ENST00000389698.7	7864	41	85960	87013	-149	50864	internal_fragment	FALSE	canonical	0	0	junction_18	9.23140490743944	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTAAGTTGTTGGAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	35723266	35625364	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35625433_35627089_35627952_35634573_35634758_35635463_35635599_35651804_35651874_35654366_35654478_35655806_35655916_35659137_35659197_35664641_35664768_35671388_35671518_35672866_35673023_35674179_35674279_35674515_35674710_35677949_35678103_35683808_35683986_35684928_35685146_35686541_35686667_35689835_35690004_35721687_35721850_35723026
WTC11_00025875	chr14	-	582	2	FSM	ENSG00000174373.17	ENST00000557638.1	586	2	0	4	0	-4	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	35684974	35683449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35683986_35684928
WTC11_00025876	chr14	-	950	4	FSM	ENSG00000174373.17	ENST00000556839.5	1305	4	355	0	355	0	multi-exon	FALSE	canonical	0	0	junction_2	11.8977121983832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTATTTTATATAT	NA	False	NA	NA	False	NA	NA	NA	35723521	35686541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35686667_35689835_35690004_35721687_35721850_35723026
WTC11_00025877	chr14	-	2299	14	ISM	ENSG00000174373.17	ENST00000553892.2	6271	41	-433	176512	3	3317	5prime_fragment	FALSE	canonical	2	18	junction_1	6.22649425995325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAATAAAAATAAATAAATA	-35807761	True	NA	NA	False	NA	NA	NA	35809268	35725023	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35725154_35728361_35728511_35738512_35738651_35742367_35742566_35748584_35748825_35750481_35750691_35752023_35752163_35756792_35756909_35760828_35761007_35762709_35762754_35770941_35771000_35775005_35775056_35775634_35775746_35808729
WTC11_00025879	chr14	-	1602	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	-16	0	12	multi-exon	FALSE	canonical	3	73	junction_1	94.8248385181857	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTTGATCAATTTAC	-36316124	True	NA	4	True	AATAAA	-30	NA	36320627	36298551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
WTC11_00025880	chr14	-	1615	9	FSM	ENSG00000151332.20	ENST00000416007.9	1603	9	0	-12	0	12	multi-exon	FALSE	canonical	3	295	junction_5	28.0510137962962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTTGATCAATTTAC	-36316134	True	NA	4	True	AATAAA	-30	NA	36320637	36298551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36299191_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
WTC11_00025882	chr14	-	853	7	FSM	ENSG00000151332.20	ENST00000604336.5	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	128.049035746294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACTTGAGGATAAA	-36316094	True	NA	NA	False	NA	NA	NA	36320597	36308156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314937_36316692_36316813_36320459
WTC11_00025884	chr14	-	4556	10	FSM	ENSG00000183032.12	ENST00000331299.6	3893	10	-59	-604	-59	604	multi-exon	FALSE	canonical	2	38	junction_1	5.42513582921498	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAAGCCTTCACTGCA	-37172647	False	NA	0	True	AATAAA	-15	NA	37172665	36677316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36680720_36683827_36683881_36684743_36684926_36711317_36711483_36725569_36725678_36729506_36729567_36734506_36734574_36813917_36814002_36874955_36875005_37172280
WTC11_00025885	chr14	-	212	3	FSM	ENSG00000183032.12	ENST00000557611.1	591	3	0	379	0	-379	multi-exon	FALSE	canonical	1	1	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTTTTCCAAGCCTT	-37172328	False	NA	NA	False	NA	NA	NA	37172346	36870853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36870951_36874955_36875005_37172280
WTC11_00025886	chr14	-	5552	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	-1709	0	1709	multi-exon	FALSE	canonical	3	486	junction_15	58.860226943068	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGATCCGATTCTTC	-39097049	True	NA	NA	False	AATAAA	-24	NA	39103235	39030209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
WTC11_00025888	chr14	-	239	2	FSM	ENSG00000100934.15	ENST00000553925.1	484	2	0	245	0	-245	multi-exon	FALSE	canonical	3	522	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCAGGCAACATAGAGAG	-39067187	False	24	NA	False	NA	NA	NA	39067211	39064793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39064994_39067172
WTC11_00025889	chr14	-	3256	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	-5	0	2	multi-exon	FALSE	canonical	3	98	junction_2	12.1095004025765	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGTGATTTTGTGGTGG	-39167257	True	NA	0	True	AATAAA	-24	NA	39170333	39147808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
WTC11_00025890	chr14	-	3230	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	-1	0	0	multi-exon	FALSE	canonical	3	20	junction_2	42.0535373066286	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCGTGATTTTGTGGT	-39167317	True	NA	-2	True	AATAAA	-22	NA	39170393	39147810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
WTC11_00025893	chr14	-	1359	1	FSM	ENSG00000258940.2	ENST00000605298.1	1359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCGGAAGACTCCAGA	-39267024	True	NA	-8	True	AATAAA	-21	NA	39267061	39265702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39265700_39267100
WTC11_00025894	chr14	-	517	1	FSM	ENSG00000259100.1	ENST00000553667.1	1699	1	1242	-60	1242	60	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAACTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	39385860	39385343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39385300_39385900
WTC11_00025895	chr14	-	3853	4	FSM	ENSG00000165355.8	ENST00000298097.8	3771	4	-67	-15	-34	15	multi-exon	FALSE	canonical	3	42	junction_3	7.36357401145817	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTATTCTGGTTGT	-39432484	False	NA	NA	False	AATAAA	-31	NA	39432500	39397668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39399788_39401175_39401862_39402400_39402512_39431563
WTC11_00025896	chr14	-	844	3	FSM	ENSG00000286123.1	ENST00000652631.1	869	3	25	0	25	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTTATTTTAATAAA	-40348287	False	100	NA	False	AATAAA	-20	NA	40348306	40267282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_40267565_40286815_40286951_40347879
WTC11_00025897	chr14	-	6447	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	-1759	-4158	-1627	-46	multi-exon	FALSE	canonical	3	10	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCGTTAAAGTATACTT	-41606598	False	NA	NA	False	NA	NA	NA	41606615	41583702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_41588288_41604753
WTC11_00025898	chr14	-	342	1	FSM	ENSG00000259137.1	ENST00000555080.1	552	1	227	-17	227	17	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTATTAAAAGTAAGCCT	NA	False	NA	NA	False	NA	NA	NA	44120534	44120192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44120200_44120500
WTC11_00025899	chr14	-	6630	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	-9	-99	-9	99	multi-exon	FALSE	canonical	3	20	junction_1	5.35607132140714	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTCCTTTACATCTTC	-44960060	True	NA	86	True	NA	NA	NA	44961956	44924224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
WTC11_00025900	chr14	-	2170	5	FSM	ENSG00000179454.14	ENST00000355081.3	2177	5	7	0	7	0	multi-exon	FALSE	canonical	1	2	junction_4	8.09320702811932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTAAAGACTTT	-44959229	False	NA	NA	False	AGTAAA	-27	NA	44961125	44928812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44960886
WTC11_00025901	chr14	-	847	3	FSM	ENSG00000179454.14	ENST00000579157.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCACTAGACTATATGA	-44960013	True	NA	NA	False	ACTAAA	-32	NA	44961909	44945232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44945929_44953622_44953710_44961845
WTC11_00025902	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_2	138.357929540257	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-45116203	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
WTC11_00025903	chr14	-	2388	3	FSM	ENSG00000100442.11	ENST00000556231.1	704	3	-382	-1302	-382	624	multi-exon	FALSE	canonical	3	2619	junction_2	113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATACTGTACAAAAGAAG	-45113365	False	NA	NA	False	AAGAAA	-41	NA	45131643	45120285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45121621_45129793_45129902_45130698
WTC11_00025904	chr14	-	3361	3	FSM	ENSG00000129534.14	ENST00000470424.1	793	3	-1791	-777	-1791	130	multi-exon	FALSE	canonical	3	367	junction_2	24.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCAGAGCAGGCATGG	NA	False	NA	NA	False	NA	NA	NA	45208235	45203059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45204213_45204398_45204454_45206082
WTC11_00025905	chr14	-	4659	18	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	57	junction_17	89.8998674035148	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245369	True	NA	-11	True	AATAAA	-21	NA	45253176	45203189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
WTC11_00025906	chr14	-	4515	17	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	83.8114513357214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245355	True	NA	-11	True	AATAAA	-21	NA	45253162	45203189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218433_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
WTC11_00025907	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_14	45.4549485067358	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245395	True	NA	-11	True	AATAAA	-21	NA	45253202	45203189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
WTC11_00025909	chr14	-	679	5	ISM	ENSG00000139915.21	ENST00000426342.7	5110	16	381400	33788	14	-83	internal_fragment	FALSE	canonical	3	12	junction_2	1.11803398874989	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGATTCTTACAAAATTA	NA	False	NA	NA	False	NA	NA	NA	46920160	46873416	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_46873592_46874044_46874201_46877488_46877510_46882043_46882222_46920011
WTC11_00025910	chr14	-	4769	4	NNC	ENSG00000289195.1	novel	923	3	NA	NA	-5	2163	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	148.501402911443	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAGCATGAGGTAAACA	-48248816	True	NA	NA	False	NA	NA	NA	48260648	48231579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258584_48260263_48260392
WTC11_00025912	chr14	-	1092	3	FSM	ENSG00000289195.1	ENST00000693582.1	923	3	47	-216	47	216	multi-exon	FALSE	canonical	3	239	junction_2	87	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTATATGCAATACG	-48248764	True	NA	-17	True	AATAAA	-16	NA	48260596	48233526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_48234227_48235430_48235619_48260392
WTC11_00025913	chr14	-	1333	4	NNC	ENSG00000289195.1	novel	923	3	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	156.725520860161	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	-48248798	True	NA	-12	True	AATAAA	-13	NA	48260630	48233748	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258584_48259014_48260392
WTC11_00025914	chr14	-	778	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2435	-200	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACATGGTTGGAATTACA	-48267887	True	NA	-2	True	AATAAA	-26	NA	48268044	48262220	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48262484_48265560_48265755_48267723
WTC11_00025915	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	11584.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	-49559448	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49577854_49585949_49586050_49586284
WTC11_00025916	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	2690.5	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-49559452	True	NA	-33	True	AATAAA	-15	NA	49586380	49583576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949_49586050_49586284
WTC11_00025917	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49559423	True	NA	-35	True	AATAAA	-13	NA	49586351	49583578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949
WTC11_00025920	chr14	-	2849	1	FSM	ENSG00000213741.11	ENST00000539688.1	1690	1	-1846	687	-1846	-687	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTATATTAAACATTTTATT	NA	False	NA	-33	True	NA	NA	NA	49601010	49598161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49598200_49601000
WTC11_00025921	chr14	-	558	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	10125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2929.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	-49559862	True	NA	NA	False	NA	NA	NA	49620626	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608445_49618687_49619141_49620561
WTC11_00025922	chr14	-	555	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	10125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2929.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	-49559862	True	NA	NA	False	NA	NA	NA	49620626	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608448_49618693_49619141_49620561
WTC11_00025923	chr14	-	648	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	-104	10125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	49620730	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608445_49618687_49619127_49620561
WTC11_00025924	chr14	-	2970	3	NNC	ENSG00000165506.15	novel	2977	3	NA	NA	-95	16769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	49635339	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608449_49625175_49626049_49633286
WTC11_00025925	chr14	-	568	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	108	0	-108	multi-exon	FALSE	canonical	3	5859	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTCAAACTTTACTAACAA	-49559862	True	NA	49	True	TATAAA	-27	NA	49620626	49618637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49619141_49620561
WTC11_00025926	chr14	-	3367	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	-109	-439	-95	439	multi-exon	FALSE	canonical	3	208	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTACACAGAAAAACAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	49635339	49624734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49626049_49633286
WTC11_00025927	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	20.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635192	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49626049_49628011_49628156_49633286
WTC11_00025929	chr14	-	1695	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	-3	0	3	multi-exon	FALSE	canonical	3	54	junction_4	11.1366373451785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGCTTAAATTTGTAT	-49687433	True	NA	-10	True	AATAAA	-20	NA	49688214	49643551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
WTC11_00025930	chr14	-	1596	18	NIC	ENSG00000100479.13	novel	1692	19	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	19.3903625332161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGATGTTCTGCTTAAAT	-49687415	True	NA	-16	True	AATAAA	-14	NA	49688196	49643557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
WTC11_00025932	chr14	-	5819	33	FSM	ENSG00000165525.18	ENST00000298310.10	5819	33	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_17	22.5927774686956	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTATATGCCTTC	-49845767	False	7021	-4	True	AATAAA	-13	NA	49852788	49782082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
WTC11_00025934	chr14	-	3048	10	FSM	ENSG00000165525.18	ENST00000556074.5	3047	10	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_7	92.8943379581951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTTAATCATTTCTAT	-49801509	False	NA	-8	True	AATATA	-18	NA	49801519	49783813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49784714_49784924_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49796232_49796329_49799474_49799525_49799635_49799679_49800419
WTC11_00025939	chr14	-	268	1	FSM	ENSG00000278771.1	ENST00000610674.1	299	1	4	27	4	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACATAGTGAGACCC	-49846889	False	7021	NA	False	NA	NA	NA	49853910	49853642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49853600_49853900
WTC11_00025940	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-49855828	True	NA	-2	True	NA	NA	NA	49862849	49862549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49862500_49862800
WTC11_00025941	chr14	-	1786	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	-14	0	9	multi-exon	FALSE	canonical	3	42	junction_4	22.3015694514982	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGAAATACCTTTGAA	-50115051	True	NA	7	True	AATAAA	-29	NA	50116572	50108622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
WTC11_00025942	chr14	-	1803	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	-10	0	9	multi-exon	FALSE	canonical	3	52	junction_4	19.8131269616888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGAAATACCTTTGAA	-50115079	True	NA	7	True	AATAAA	-29	NA	50116600	50108622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
WTC11_00025943	chr14	-	1865	5	ISM	ENSG00000100483.14	ENST00000395860.7	1772	6	14	0	0	0	intron_retention	FALSE	canonical	3	42	junction_4	22.0567450001128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-50115037	True	NA	-7	True	AATAAA	-15	NA	50116558	50108636	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068
WTC11_00025944	chr14	-	1655	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	42	-902	0	-2	multi-exon	FALSE	canonical	3	22	junction_1	33.1087224157019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGACTGTGAATTTCAGA	-50115037	True	NA	-5	True	AATAAA	-17	NA	50116558	50108634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
WTC11_00025945	chr14	-	5835	23	FSM	ENSG00000100485.12	ENST00000216373.10	5508	23	-327	0	-327	0	multi-exon	TRUE	canonical	3	13	junction_2	8.51893855181423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTAAAATATGTGTTT	-50231840	True	NA	-7	True	AATAAA	-25	NA	50231905	50117129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50118854_50120274_50120385_50129960_50130003_50130500_50130763_50134122_50134240_50138611_50138785_50139941_50140060_50145169_50145333_50145476_50145597_50150007_50150231_50153069_50153174_50156998_50157122_50158564_50158647_50159430_50160087_50161481_50161610_50174453_50174553_50180571_50180683_50182462_50182607_50188496_50188701_50199690_50199856_50200952_50201085_50204283_50204410_50231196
WTC11_00025946	chr14	-	2279	6	FSM	ENSG00000100485.12	ENST00000555794.2	2278	6	0	-1	0	1	multi-exon	FALSE	canonical	3	38	junction_2	2.13541565040626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGCATTTGTACTT	NA	False	NA	NA	False	AATAAA	-21	NA	50180654	50155890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50157122_50158564_50158647_50159430_50160087_50161481_50161610_50174453_50174553_50180571
WTC11_00025947	chr14	-	6097	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	-2	0	2	multi-exon	TRUE	canonical	3	50	junction_4	8.5764535535124	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTCCCTGGGATAA	-50309652	True	NA	-3	True	ATTAAA	-18	NA	50312229	50242431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
WTC11_00025948	chr14	-	4600	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	3	-2645	0	-572	multi-exon	FALSE	canonical	3	45	junction_1	9.54986910905066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCCCTGGCCTACGG	-50309649	True	NA	NA	False	NA	NA	NA	50312226	50243005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
WTC11_00025949	chr14	-	548	4	FSM	ENSG00000087299.12	ENST00000556393.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.6526068692749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCATTTTATTAGAGC	-50312124	False	NA	NA	False	NA	NA	NA	50312147	50302016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50302169_50302901_50303018_50311290_50311434_50312010
WTC11_00025950	chr14	-	745	4	FSM	ENSG00000100490.10	ENST00000534267.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGTCATCATGTACA	NA	False	NA	NA	False	AATGAA	-20	NA	50341129	50331925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50332433_50334564_50334622_50338946_50339030_50341031
WTC11_00025952	chr14	-	3984	10	ISM	ENSG00000012983.12	ENST00000554990.6	4812	19	10856	20	-1343	0	3prime_fragment	FALSE	canonical	3	63	junction_9	54.8204701787324	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTTATTTATTCTTT	NA	False	NA	-48	True	AATAAA	-18	NA	50439744	50418520	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091
WTC11_00025953	chr14	-	4356	32	NIC	ENSG00000012983.12	novel	4270	33	NA	NA	2	21	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	35.8966895479162	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTAAGTGTGTGGCTG	-50526981	True	NA	-7	True	TATAAA	-36	NA	50532617	50418479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
WTC11_00025954	chr14	-	4379	32	NNC	ENSG00000012983.12	novel	4354	33	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	49.1388273123789	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTTATTTATTCTTT	-50526994	True	NA	-48	True	AATAAA	-18	NA	50532630	50418520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438011_50440011_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
WTC11_00025955	chr14	-	4331	32	NNC	ENSG00000012983.12	novel	4270	33	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	44.4070425928347	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTTATTTATTCTTT	-50526994	True	NA	-48	True	AATAAA	-18	NA	50532630	50418520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438011_50440011_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
WTC11_00025956	chr14	-	586	4	FSM	ENSG00000012983.12	ENST00000557124.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	67.5392889772727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATATATTATTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	50438401	50434963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50435066_50437475_50437535_50437893_50438009_50438091
WTC11_00025957	chr14	-	3094	5	FSM	ENSG00000151748.15	ENST00000324679.5	3094	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	33.2001506020681	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGCCATAGACAAAG	-50655101	True	NA	54	True	NA	NA	NA	50668306	50633579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50635385_50640749_50640894_50644743_50645015_50665178_50665620_50667873
WTC11_00025958	chr14	-	2616	1	FSM	ENSG00000151748.15	ENST00000602664.1	870	1	0	-1746	0	1746	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTTCAGATTCAAGTAT	-50665108	False	NA	-1	True	AATAAA	-18	NA	50665125	50662509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50662500_50665100
WTC11_00025959	chr14	-	3534	2	ISM	ENSG00000151748.15	ENST00000324679.5	3094	5	9	28930	0	1746	5prime_fragment	FALSE	canonical	3	415	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTTCAGATTCAAGTAT	-50655092	True	NA	-1	True	AATAAA	-18	NA	50668297	50662509	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50665620_50667873
WTC11_00025960	chr14	-	10334	31	FSM	ENSG00000100503.26	ENST00000530997.7	10334	31	41	-41	0	41	multi-exon	FALSE	canonical	3	25	junction_27	16.0312195418814	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTACAAATGCAGAATC	-50829507	True	NA	42	True	ACTAAA	-3	NA	50831121	50719721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50723673_50725952_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
WTC11_00025962	chr14	-	688	1	FSM	ENSG00000270062.1	ENST00000602615.1	496	1	-200	8	-200	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	790	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACGAAGTGATTTGCCTT	NA	False	NA	-6	True	AATAAA	-11	NA	50724472	50723784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50723800_50724500
WTC11_00025963	chr14	-	6508	30	FSM	ENSG00000100503.26	ENST00000382041.7	6496	30	0	-12	0	0	multi-exon	FALSE	canonical	3	25	junction_26	16.3041834246998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTAAGAACTTAGGAT	-50829507	True	NA	-10	True	AATAAA	-19	NA	50831121	50725827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
WTC11_00025965	chr14	-	6725	29	FSM	ENSG00000100503.26	ENST00000453196.6	6858	29	133	0	-94	0	multi-exon	FALSE	canonical	3	10	junction_1	16.9842363889074	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGACTGCCTTTGTTTTT	-50830542	False	NA	-2	True	AATAAA	-14	NA	50830573	50727235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50727752_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463
WTC11_00025968	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_13	53.0823329557223	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-50934156	True	NA	-26	True	AATAAA	-21	NA	50944483	50905216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
WTC11_00025969	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	93.2326176166599	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	-50934156	True	NA	-27	True	AATAAA	-20	NA	50944483	50905217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
WTC11_00025970	chr14	-	2498	1	Genic_Genomic	ENSG00000100504.17	novel	NA	NA	NA	NA	3646	-510	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATTCTATTCTACCTC	-50908212	False	NA	NA	False	NA	NA	NA	50908225	50905727	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_50905700_50908200
WTC11_00025971	chr14	-	426	2	FSM	ENSG00000100504.17	ENST00000528757.2	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	-50915927	False	NA	NA	False	TTTAAA	-34	NA	50915940	50915189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50915500_50915824
WTC11_00025972	chr14	-	746	3	FSM	ENSG00000100504.17	ENST00000553872.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGCTCCACCCGTGG	-50921515	False	NA	NA	False	NA	NA	NA	50921528	50917015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50917106_50920540_50920624_50920955
WTC11_00025973	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	15.6044865343272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	-50934143	True	NA	14	True	AATAAA	-43	NA	50944470	50923236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
WTC11_00025974	chr14	-	5197	10	FSM	ENSG00000100505.14	ENST00000298355.7	5284	10	79	8	79	-4	multi-exon	FALSE	canonical	2	6	junction_2	7.76665871880057	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAATGTCTCTAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	51095982	50975269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50977354_50979386_50979550_50981799_50982104_50998049_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
WTC11_00025975	chr14	-	3725	7	FSM	ENSG00000100505.14	ENST00000360392.4	3726	7	0	1	0	-1	multi-exon	FALSE	canonical	3	21	junction_2	3.13138237134266	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTTGTTCTATTTG	-51094649	True	NA	-1	True	AATAAA	-25	NA	51095076	50996064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
WTC11_00025976	chr14	-	712	5	FSM	ENSG00000087303.19	ENST00000554284.1	811	5	0	99	0	-99	multi-exon	FALSE	canonical	2	21	junction_3	7.49583217528247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCCAAAATCATTTT	NA	False	NA	NA	False	NA	NA	NA	52042111	52028721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104
WTC11_00025977	chr14	-	4569	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	-12	0	12	multi-exon	TRUE	canonical	3	51	junction_9	8.99666604915399	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTAGTCTCCACTGTGC	-52550259	True	NA	7	True	AATAAA	-32	NA	52552505	52430583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
WTC11_00025978	chr14	-	542	4	FSM	ENSG00000087301.9	ENST00000557374.1	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.1126983722081	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTGTTATGATTCTCA	-52550259	True	NA	NA	False	AATACA	-39	NA	52552505	52488362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52488487_52490390_52490452_52490838_52491006_52552315
WTC11_00025979	chr14	-	5527	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	-388	0	-46	0	multi-exon	FALSE	canonical	3	277	junction_4	18.3782480122562	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	NA	False	NA	0	True	AATAAA	-18	NA	52695946	52639914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
WTC11_00025980	chr14	-	863	6	FSM	ENSG00000197930.13	ENST00000556358.5	951	6	88	0	88	0	multi-exon	FALSE	canonical	3	277	junction_3	24.1047713119208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAGAAATTGATAGCAAA	-52658432	False	NA	NA	False	NA	NA	NA	52658453	52646251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123
WTC11_00025981	chr14	-	3889	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	-22	0	22	multi-exon	FALSE	canonical	3	337	junction_1	23.0651251893416	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTGTGTGTA	-52786092	True	NA	-1	True	AATAAA	-40	NA	52791607	52775170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
WTC11_00025982	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	166.880862360614	4900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-52791285	False	NA	NA	False	NA	NA	NA	52791668	52778374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
WTC11_00025983	chr14	-	3369	15	FSM	ENSG00000073712.15	ENST00000395631.6	3369	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	129.175090793979	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTTGTTTTTAA	-52946330	True	NA	-1	True	AATAAA	-24	NA	52951035	52857267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950827
WTC11_00025984	chr14	-	3292	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	-6	0	1	multi-exon	FALSE	canonical	3	55	junction_3	91.0782630488746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTACTTGTTTTTAAT	-52946345	True	NA	0	True	AATAAA	-25	NA	52951050	52857266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
WTC11_00025985	chr14	-	3255	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	-8	0	1	multi-exon	FALSE	canonical	3	317	junction_13	34.321745617352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTACTTGTTTTTAAT	-52950960	False	NA	0	True	AATAAA	-25	NA	52950992	52857266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
WTC11_00025986	chr14	-	2082	15	FSM	ENSG00000073712.15	ENST00000399304.7	2082	15	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_12	35.0265205645257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTGTACCACCACC	-52950986	False	NA	NA	False	AATAAA	-19	NA	52951018	52859487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
WTC11_00025987	chr14	-	12774	13	FSM	ENSG00000100523.16	ENST00000395606.5	12769	13	0	-5	0	5	multi-exon	TRUE	canonical	1	1	junction_10	23.6130554754968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGTTTCATTTTGC	-53151142	True	NA	NA	False	ATTAAA	-30	NA	53153204	53036739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103030_53103052_53103682_53103857_53152260
WTC11_00025988	chr14	-	12956	13	FSM	ENSG00000100523.16	ENST00000673822.2	12941	13	0	-15	0	5	multi-exon	FALSE	canonical	3	26	junction_1	16.5401447662615	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGTTTCATTTTGC	-53151261	True	NA	NA	False	ATTAAA	-30	NA	53153323	53036739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53046950_53051843_53051928_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
WTC11_00025989	chr14	-	5603	12	FSM	ENSG00000100523.16	ENST00000357758.3	5603	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	16.4944268073334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTACATGCTATGA	-53151220	True	NA	-1	True	ATTAAA	-13	NA	53153282	53043967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
WTC11_00025995	chr14	-	1722	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	-14	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1656862405839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956273	True	NA	3	True	AATAAA	-25	NA	53956825	53949735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
WTC11_00025996	chr14	-	1974	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	-43	0	-43	0	multi-exon	FALSE	canonical	3	29	junction_3	7.03957069398096	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956316	True	NA	3	True	AATAAA	-25	NA	53956868	53949735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
WTC11_00025997	chr14	-	4753	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	-18	0	18	multi-exon	FALSE	canonical	3	660	junction_1	66.7359535782624	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGGTTGAGTCTGTGTG	-54433968	True	NA	16	True	AATAAA	-35	NA	54441374	54423542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
WTC11_00025999	chr14	-	4588	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	36	-3768	0	0	multi-exon	FALSE	canonical	3	19	junction_2	339.405689731658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-54433934	True	NA	-2	True	AATAAA	-17	NA	54441340	54423560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
WTC11_00026001	chr14	-	4090	7	FSM	ENSG00000197045.13	ENST00000358056.8	4085	7	0	-5	0	4	multi-exon	FALSE	canonical	0	0	junction_3	330.653771589962	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTTTTTTTACTCA	-54480303	True	NA	-15	True	AATAAA	-23	NA	54488980	54474479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54482152_54482203_54483670_54483768_54488924
WTC11_00026002	chr14	-	4096	7	NNC	ENSG00000197045.13	novel	4125	7	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.81353997562	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCCAGCTTTTCTTTT	-54480283	True	NA	-23	True	AATAAA	-15	NA	54488960	54474487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_54478160_54479785_54479860_54480873_54480959_54481407_54481459_54482121_54482203_54483670_54483768_54488924
WTC11_00026005	chr14	-	2958	6	FSM	ENSG00000131979.20	ENST00000254299.8	2901	6	0	-57	0	48	multi-exon	FALSE	canonical	3	27	junction_3	4.48998886412873	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGCTGTATTCTGT	-54902471	True	NA	48	True	TATAAA	-17	NA	54902811	54841959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
WTC11_00026006	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_11	55.1433912631423	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-55020123	True	NA	NA	False	AATAAA	-18	NA	55027099	54938948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
WTC11_00026007	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_24	77.8272660019182	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-55020129	True	NA	-9	True	ATTAAA	-29	NA	55027105	54941158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
WTC11_00026008	chr14	-	3830	24	NIC	ENSG00000198554.12	novel	6019	26	NA	NA	12	-4	intron_retention	FALSE	canonical	1	22	junction_1	81.5412498391508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATACCTTCTAGGGGTT	-55020063	True	NA	-13	True	ATTAAA	-25	NA	55027039	54941162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_54941691_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710
WTC11_00026009	chr14	-	768	5	FSM	ENSG00000198554.12	ENST00000455555.1	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	15.2807067899361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACTCAGCAATTTAAAT	-55020075	True	NA	NA	False	NA	NA	NA	55027051	55008315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710
WTC11_00026010	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	317.562409073413	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	-55171041	True	NA	14	True	AATAAA	-36	NA	55191544	55148111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
WTC11_00026011	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_6	125.45162857098	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-55171082	True	NA	-9	True	AATAAA	-13	NA	55191585	55148134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
WTC11_00026015	chr14	-	4856	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	-141	0	141	multi-exon	FALSE	canonical	3	26	junction_7	8.2192186706253	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATATTTTTTAAAAT	-55408145	True	NA	NA	False	AAGAAA	-5	NA	55411830	55366249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
WTC11_00026016	chr14	-	2175	4	FSM	ENSG00000186615.12	ENST00000412224.6	2185	4	0	10	0	4	multi-exon	FALSE	canonical	2	3	junction_2	10.1434160364686	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCTCTACTAAAAAAAAAT	-55579521	True	NA	NA	False	NA	NA	NA	55580110	55557981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55559775_55561088_55561164_55578605_55578738_55579935
WTC11_00026017	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	21	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	-55579485	True	NA	-36	True	NA	NA	NA	55580074	55576185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55577380_55578605_55578738_55579935
WTC11_00026018	chr14	-	401	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	14	0	14	0	multi-exon	FALSE	canonical	3	6	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	-55580834	True	NA	-10	True	ATTAAA	-14	NA	55580874	55577139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55577380_55578605_55578738_55580845
WTC11_00026019	chr14	-	373	1	FSM	ENSG00000277763.1	ENST00000614633.1	675	1	273	29	273	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAGAAATAAATACTG	-56117706	False	NA	NA	False	NA	NA	NA	56117717	56117344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56117300_56117700
WTC11_00026020	chr14	-	2116	4	NNC	ENSG00000165588.19	novel	2109	3	NA	NA	0	7705	intron_retention	FALSE	non_canonical	0	0	junction_1	114.499878699596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGGATGAAACAATAGGTA	-56801014	True	NA	NA	False	TTTAAA	-24	NA	56805648	56792199	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_56792226_56800706_56802356_56804187_56804340_56805359
WTC11_00026021	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	12	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-56801033	True	NA	-1	True	ATTAAA	-16	NA	56805667	56800706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804340_56805359
WTC11_00026022	chr14	-	1938	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	-1103	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-56801014	True	NA	-1	True	ATTAAA	-16	NA	56805648	56800706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56805359
WTC11_00026023	chr14	-	10477	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	6	3	0	-3	multi-exon	FALSE	canonical	3	349	junction_13	42.9213491695318	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATACAATTGTTGTTT	-57257611	True	NA	-9	True	AATAAA	-15	NA	57268899	57200509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
WTC11_00026024	chr14	-	3661	8	FSM	ENSG00000070367.16	ENST00000554011.5	3661	8	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	35.9671051526422	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTCAAATTATTTTGTT	-57232359	False	NA	-12	True	AATAAA	-38	NA	57232372	57206793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505
WTC11_00026025	chr14	-	2632	17	FSM	ENSG00000070367.16	ENST00000340918.11	2632	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	105.017985810765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCATCAATTGTTAATC	-57257611	True	NA	NA	False	AATACA	-41	NA	57268899	57208159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57246710_57246859_57247617_57247713_57268621
WTC11_00026026	chr14	-	2349	18	FSM	ENSG00000070367.16	ENST00000555148.5	2349	18	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_16	107.779988641478	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCGGTTGATAGAAAGCA	-57257549	True	NA	NA	False	NA	NA	NA	57268837	57208544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246828_57247617_57247713_57268621
WTC11_00026027	chr14	-	6484	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	11	0	11	0	multi-exon	FALSE	canonical	3	27	junction_4	11.771636613973	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGGCCTGGTAGCGC	-58151089	True	NA	NA	False	AATACA	-6	NA	58152202	58000760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
WTC11_00026028	chr14	-	2511	5	FSM	ENSG00000139971.15	ENST00000334342.5	2380	5	0	-131	0	123	multi-exon	FALSE	canonical	2	15	junction_1	18.6949190958399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGATCCCATCACTC	-58151070	True	NA	NA	False	NA	NA	NA	58152183	58115992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58116508_58131511_58131722_58133089_58133342_58137989_58139415_58152074
WTC11_00026030	chr14	-	2352	2	FSM	ENSG00000257621.9	ENST00000667365.1	2335	2	0	-17	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGGGATTTATTG	NA	False	NA	-6	True	ATTAAA	-19	NA	58273801	58265364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273478
WTC11_00026031	chr14	-	2472	5	FSM	ENSG00000257621.9	ENST00000554360.5	2475	5	0	3	0	-3	multi-exon	FALSE	canonical	3	21	junction_2	40.034360242172	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTCTCTGGGATTTA	-58296044	True	NA	-9	True	ATTAAA	-16	NA	58298129	58265367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
WTC11_00026033	chr14	-	2187	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	-1148	0	-78	multi-exon	FALSE	canonical	2	25	junction_2	40.9986449640581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGTGGGCCATAATTT	-58296017	True	NA	-22	True	AATAAA	-14	NA	58298102	58265459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
WTC11_00026040	chr14	-	856	6	NNC	ENSG00000100575.14	novel	1252	6	NA	NA	0	4375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.439271621156	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-58419967	True	NA	NA	False	NA	NA	NA	58427114	58404119	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_58404148_58408650_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053
WTC11_00026041	chr14	-	1362	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	-74	-36	-74	36	multi-exon	FALSE	canonical	2	4	junction_5	103.895331945184	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTGGGCATTACATATA	-58427541	True	NA	27	True	NA	NA	NA	58427605	58408458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
WTC11_00026042	chr14	-	746	5	FSM	ENSG00000100575.14	ENST00000556007.6	746	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	104.688526114374	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAATATCACTGAGCAG	-58419967	True	NA	-33	True	AGTAAA	-5	NA	58427114	58408663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409100_58410842_58410939_58411906_58411972_58424007_58424096_58427053
WTC11_00026043	chr14	-	1005	5	ISM	ENSG00000100575.14	ENST00000395159.7	1252	6	386	10	1	-10	3prime_fragment	FALSE	canonical	3	212	junction_3	30.7042342356881	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTAATCATTTCAATGCA	-58419998	True	NA	-19	True	CATAAA	-9	NA	58427145	58408504	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053
WTC11_00026045	chr14	-	4451	1	FSM	ENSG00000181619.12	ENST00000395116.2	4622	1	-42	213	-42	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAGTCAGCCACCCATT	NA	False	NA	NA	False	AAGAAA	-32	NA	59465422	59460971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59461000_59465400
WTC11_00026046	chr14	-	1515	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	1	0	1	0	multi-exon	FALSE	canonical	3	30	junction_4	24.0767003553228	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-59483288	True	NA	NA	False	ATTAAA	-34	NA	59484407	59472605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
WTC11_00026047	chr14	-	731	2	FSM	ENSG00000126790.12	ENST00000478430.2	729	2	0	-2	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATTCTTTGTAAAATA	-59473820	False	NA	-21	True	AATAAA	-18	NA	59474939	59472860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59473091_59474438
WTC11_00026053	chr14	-	3239	9	FSM	ENSG00000139970.18	ENST00000267484.10	3239	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.76387462923434	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTCTCCCTCTCTTCT	-59870711	True	NA	-8	True	AATAAA	-15	NA	59870776	59595982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59726918_59727669_59745707_59746482_59870389
WTC11_00026054	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_3	25.2102272015854	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-60161113	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
WTC11_00026055	chr14	-	1756	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	-383	-12	-258	12	multi-exon	FALSE	canonical	3	542	junction_2	20.5465325541805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAATATTTTATCCCC	NA	False	NA	NA	False	TATAAA	-10	NA	60165676	60148935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
WTC11_00026057	chr14	-	482	5	FSM	ENSG00000179008.9	ENST00000555476.5	482	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	6.81909084849293	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGAAGAAATTCAAAGCA	-60485914	True	NA	NA	False	AAGAAA	-6	NA	60486044	60471631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485944
WTC11_00026058	chr14	-	6294	4	NIC	ENSG00000100625.9	novel	1573	3	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	6.0184900284226	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGGGAAATATTGTGT	-60722388	True	NA	-2	True	AATAAA	-32	NA	60724348	60709524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_60714204_60719759_60720446_60723211_60724048_60724255
WTC11_00026059	chr14	-	6505	3	FSM	ENSG00000100625.9	ENST00000216513.5	6491	3	0	-14	0	14	multi-exon	FALSE	canonical	3	97	junction_1	7	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGGGAAATATTGTGT	-60722391	True	NA	-2	True	AATAAA	-32	NA	60724351	60709524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60714204_60719759_60720446_60723211
WTC11_00026060	chr14	-	4719	4	NIC	ENSG00000100625.9	novel	1573	3	NA	NA	0	2981	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	41.2499158248299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTGTGGCACTTATTT	-60722388	True	NA	45	True	ATTAAA	-20	NA	60724348	60716820	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_60720446_60720979_60721145_60723211_60724048_60724255
WTC11_00026062	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	7.1239034243875	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-60978908	True	NA	2	True	AATAAA	-30	NA	60981079	60971440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
WTC11_00026063	chr14	-	490	2	FSM	ENSG00000126814.7	ENST00000553903.1	560	2	70	0	-21	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATAAAATATTTACTCAT	-60978929	False	NA	NA	False	GATAAA	-26	NA	60981100	60979473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60979887_60981023
WTC11_00026064	chr14	-	3824	1	FSM	ENSG00000182107.7	ENST00000555868.2	3969	1	-166	311	-28	-311	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTAGTCTTCTGCAT	-61280353	True	NA	-2	True	AATAAA	-17	NA	61281504	61277680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_61277700_61281500
WTC11_00026065	chr14	-	6662	14	FSM	ENSG00000154001.14	ENST00000337537.8	6655	14	0	-7	0	7	multi-exon	FALSE	canonical	3	211	junction_13	37.3654588462781	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTTTTGTTTGT	-63537908	True	NA	-1	True	AATAAA	-24	NA	63543377	63371356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63376109_63382055_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
WTC11_00026069	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639231	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63599974_63624927_63625034_63641803
WTC11_00026070	chr14	-	3618	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	-468	-1463	-4	0	multi-exon	FALSE	canonical	3	44	junction_2	53.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639235	True	NA	NA	False	ATTAAA	-20	NA	63641875	63597038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63599974_63624927_63625034_63641298
WTC11_00026071	chr14	-	3222	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	-22	-2224	-4	0	multi-exon	FALSE	canonical	2	19	junction_3	57.249939349798	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639235	True	NA	NA	False	ATTAAA	-20	NA	63641875	63597038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
WTC11_00026072	chr14	-	3340	3	FSM	ENSG00000126821.8	ENST00000247225.7	3336	3	0	-4	0	4	multi-exon	FALSE	canonical	3	78	junction_1	4	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTTTGTTTTGTTTG	-63727412	True	NA	NA	False	AATAAA	-24	NA	63728065	63684211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63686657_63698568_63698659_63727260
WTC11_00026073	chr14	-	10363	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	2	0	-2	multi-exon	FALSE	canonical	3	39	junction_2	28	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCATGGTGTCCTTTCA	-64503738	True	NA	-3	True	AATAAA	-16	NA	64503838	64478052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64488058_64490360_64490541_64503660
WTC11_00026074	chr14	-	958	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	-33	-3	-32	3	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGTGTGTGTGTTCT	-64942677	True	NA	-2	True	AATAAA	-19	NA	64942778	64939154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64939839_64942504
WTC11_00026076	chr14	-	3522	8	FSM	ENSG00000139998.16	ENST00000642625.1	3518	8	0	-4	0	2	multi-exon	FALSE	canonical	3	21	junction_7	166.594338047209	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGCCTGGATGAGTC	-64972153	False	NA	-1	True	AATAAA	-20	NA	64972197	64945811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64957939_64958160_64971952
WTC11_00026077	chr14	-	3441	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	-4	0	2	multi-exon	FALSE	canonical	3	332	junction_6	25.8005167906898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGCCTGGATGAGTC	-64967888	True	NA	-1	True	AATAAA	-20	NA	64972336	64945811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
WTC11_00026079	chr14	-	884	4	FSM	ENSG00000125952.20	ENST00000341653.6	330	4	-122	-432	0	432	multi-exon	FALSE	canonical	1	5	junction_1	70.0618774132314	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTCGCAGGAATTCAAG	-65093156	True	NA	NA	False	NA	NA	NA	65102509	65005741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65006285_65093707_65093816_65101545_65101573_65102303
WTC11_00026080	chr14	-	1971	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	2	0	1	multi-exon	FALSE	canonical	3	243	junction_3	67.8871612800732	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTGGTGTCTTCTTA	-65093151	True	NA	-2	True	AATAAA	-18	NA	65102504	65075125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
WTC11_00026081	chr14	-	2011	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	-1	0	1	multi-exon	FALSE	canonical	3	150	junction_3	116.77836914429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTGGTGTCTTCTTA	-65093164	True	NA	-2	True	AATAAA	-18	NA	65102517	65075125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
WTC11_00026082	chr14	-	2097	6	FSM	ENSG00000125952.20	ENST00000394606.6	2097	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.949133616468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093166	True	NA	-3	True	AATAAA	-17	NA	65102519	65075126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077343_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
WTC11_00026083	chr14	-	3155	4	FSM	ENSG00000125952.20	ENST00000284165.10	3155	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	109.63880091768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAGAATTGTCTTGCA	-65093135	True	NA	-5	True	AATAAA	-18	NA	65102488	65075201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65078037_65093707_65093816_65101545_65101573_65102303
WTC11_00026088	chr14	-	909	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	-12	0	12	multi-exon	FALSE	canonical	3	16	junction_1	64.88108781113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTCATCCCTCCAG	-65093156	True	NA	NA	False	AATAAA	-31	NA	65102509	65083731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
WTC11_00026089	chr14	-	960	1	FSM	ENSG00000224861.1	ENST00000445822.1	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	860	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCCGGCTTACCATC	NA	False	NA	NA	False	GGGGCT	-4	NA	66013789	66012829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_66012800_66013800
WTC11_00026090	chr14	-	2854	10	NIC	ENSG00000100554.12	novel	1750	13	NA	NA	0	-132	intron_retention	FALSE	canonical	2	2	junction_1	118.494048399794	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGGTGCCTCAAAAGCT	-67356342	True	NA	NA	False	NA	NA	NA	67359787	67312136	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_67312184_67336646_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
WTC11_00026091	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_4	31.8345331362029	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-67356359	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
WTC11_00026094	chr14	-	903	4	FSM	ENSG00000100564.9	ENST00000560722.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	51.6161042914149	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTTTCGGAAATTGC	-67599004	True	NA	NA	False	NA	NA	NA	67600268	67589805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67590173_67592634_67592716_67593742_67593953_67600023
WTC11_00026096	chr14	-	593	4	FSM	ENSG00000100564.9	ENST00000561303.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	51.1468474101777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACCAGAAAGCCACATCA	-67598982	True	NA	NA	False	NA	NA	NA	67600246	67590111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67590173_67592634_67592719_67593727_67593953_67600023
WTC11_00026099	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_4	89.9497637573329	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-67665523	True	NA	NA	False	AGTAAA	-19	NA	67674632	67647084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
WTC11_00026100	chr14	-	565	3	FSM	ENSG00000100568.11	ENST00000554636.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACATAGTACTGTAG	-67659709	True	NA	-13	True	AATAAA	-20	NA	67659791	67651151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67656415_67656590_67659730
WTC11_00026101	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	617.527237366004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	-67665501	True	NA	-125	True	NA	NA	NA	67674610	67651263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
WTC11_00026104	chr14	-	2562	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	-23	0	23	multi-exon	FALSE	canonical	0	0	junction_5	409.604450116885	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGCAATGATTTCTC	-67675256	True	NA	4	True	ATTAAA	-43	NA	67695764	67676776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
WTC11_00026111	chr14	-	9670	42	FSM	ENSG00000072121.17	ENST00000347230.9	9674	42	6	-2	0	2	multi-exon	TRUE	canonical	3	16	junction_4	8.33768278323973	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCATAACTTCTT	-67814705	True	NA	-12	True	AATAAA	-18	NA	67816584	67746519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67748640_67751051_67751097_67752343_67752527_67753706_67753767_67754070_67754213_67755050_67755251_67755947_67756146_67761365_67761585_67762202_67762413_67762671_67762820_67766226_67766448_67767703_67767841_67768516_67768549_67769593_67769731_67772046_67772211_67775015_67775115_67775859_67776107_67777558_67777736_67778125_67778249_67780240_67780346_67781332_67781530_67782779_67783526_67784333_67784437_67785058_67785278_67785857_67786023_67786113_67786234_67789334_67789599_67790571_67790774_67793607_67793760_67794170_67794240_67797671_67797756_67798013_67798623_67802078_67802283_67804100_67804265_67805216_67805306_67805453_67805619_67806544_67806676_67807397_67807921_67809199_67809290_67813985_67814065_67815769_67816047_67816533
WTC11_00026112	chr14	-	8579	41	FSM	ENSG00000072121.17	ENST00000554523.5	8582	41	3	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.37615663654877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTCTGGAGATG	-67814705	True	NA	-33	True	NA	NA	NA	67816584	67748228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67748640_67751051_67751097_67752343_67752527_67753706_67753767_67754070_67754213_67755050_67755251_67755947_67756146_67761365_67762413_67762671_67762820_67766226_67766448_67767703_67767841_67768516_67768549_67769593_67769731_67772046_67772211_67775015_67775115_67775859_67776107_67777558_67777736_67778125_67778249_67780240_67780346_67781332_67781530_67782779_67783526_67784333_67784437_67785058_67785278_67785857_67786023_67786113_67786234_67789334_67789599_67790571_67790774_67793607_67793760_67794170_67794240_67797671_67797756_67798013_67798623_67802078_67802283_67804100_67804265_67805216_67805306_67805453_67805619_67806544_67806676_67807397_67807921_67809199_67809290_67813985_67814065_67815769_67816047_67816533
WTC11_00026113	chr14	-	8453	35	FSM	ENSG00000072121.17	ENST00000555452.1	7309	35	-12	-1132	-9	1132	multi-exon	FALSE	canonical	3	24	junction_19	6.89616512458957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGCACTTTTTTTTTT	-67814720	True	NA	-4	True	ATTAAA	-21	NA	67816599	67759649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67761585_67762202_67762413_67762671_67762820_67766226_67766448_67767703_67767841_67768516_67768549_67769593_67769731_67772046_67772211_67775015_67775115_67775859_67776107_67777558_67777736_67778125_67778249_67780240_67780346_67781332_67781530_67782779_67783526_67784333_67784437_67785058_67785278_67785857_67786023_67786113_67786234_67789334_67789599_67790571_67790774_67793607_67793760_67794170_67794240_67797671_67797756_67798013_67798623_67802078_67802283_67804100_67804265_67805216_67805306_67805453_67805619_67806544_67806676_67807397_67807921_67809199_67809290_67813985_67814065_67815769_67816047_67816533
WTC11_00026118	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68766303	True	NA	75	True	AATAAA	-19	NA	68793067	68787661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68790493_68792881
WTC11_00026120	chr14	-	3176	2	FSM	ENSG00000185650.10	ENST00000557086.1	727	2	-167	-2282	-167	-1	multi-exon	FALSE	canonical	3	32	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGATGGTGGAGCTGGT	-68796305	False	NA	74	True	AATAAA	-18	NA	68796420	68787662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68790493_68796074
WTC11_00026121	chr14	-	2908	2	FSM	ENSG00000072110.16	ENST00000553882.2	2903	2	0	-5	0	0	multi-exon	FALSE	canonical	3	1457	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-68879079	False	NA	-11	True	ATTAAA	-16	NA	68879099	68874127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081
WTC11_00026122	chr14	-	3722	22	FSM	ENSG00000072110.16	ENST00000394419.9	3722	22	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	361.852922352392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-68951376	True	NA	-11	True	ATTAAA	-16	NA	68979302	68874127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026123	chr14	-	3698	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	92	-11	-4	0	multi-exon	TRUE	canonical	3	996	junction_10	117.855674449727	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGACAGCTCTTTGCCT	-68951422	True	NA	-15	True	ATTAAA	-12	NA	68979348	68874131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026124	chr14	-	5441	20	FSM	ENSG00000072110.16	ENST00000682378.1	5441	20	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_9	120.65536644312	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026125	chr14	-	3495	20	FSM	ENSG00000072110.16	ENST00000682331.1	3495	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	434.185543140921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026126	chr14	-	3770	22	FSM	ENSG00000072110.16	ENST00000683198.1	3784	22	18	-4	-7	0	multi-exon	FALSE	canonical	1	4	junction_11	430.163808908108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-68951400	True	NA	-11	True	ATTAAA	-16	NA	68979326	68874127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885600_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026128	chr14	-	4963	21	FSM	ENSG00000072110.16	ENST00000682381.1	4976	21	18	-5	-7	0	multi-exon	FALSE	canonical	2	7	junction_2	286.872528311792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-68951400	True	NA	-11	True	ATTAAA	-16	NA	68979326	68874127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68878524_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026129	chr14	-	4895	20	FSM	ENSG00000072110.16	ENST00000684340.1	4895	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	281.291954088458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026130	chr14	-	4712	19	FSM	ENSG00000072110.16	ENST00000682130.1	4712	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	382.270010739937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026131	chr14	-	4674	10	FSM	ENSG00000072110.16	ENST00000556083.1	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	122.638080405036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTTTTTAAGGAAGAGA	-68888211	False	NA	-24	True	ATTAAA	-18	NA	68888263	68874317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424
WTC11_00026132	chr14	-	3043	21	FSM	ENSG00000072110.16	ENST00000438964.6	3043	21	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	361.677701828576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-68951336	True	NA	1	True	NA	NA	NA	68979262	68874685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
WTC11_00026141	chr14	-	5049	10	NNC	ENSG00000139990.18	novel	5946	9	NA	NA	-23	33970	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.6113019296751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCATGATGGCATGTG	-69151633	True	NA	NA	False	AATACA	-27	NA	69153173	69016910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_69016936_69051856_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
WTC11_00026142	chr14	-	5957	9	FSM	ENSG00000139990.18	ENST00000341516.10	5946	9	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_2	45.9032610497337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTCTTTTCTGTTTTA	-69151579	True	NA	49	True	NA	NA	NA	69153119	69050869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
WTC11_00026146	chr14	-	832	6	NNC	ENSG00000100632.11	novel	791	4	NA	NA	0	23573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1348.73964870912	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCACAGCTGGCAAATG	-69324749	True	NA	NA	False	NA	NA	NA	69398299	69356554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_69356574_69372491_69372514_69380127_69380641_69386962_69387084_69394824_69394913_69398230
WTC11_00026148	chr14	-	670	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_2	1244.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTTCTCCCTGAGTG	-69324721	True	NA	-17	True	AATAAA	-15	NA	69398271	69380132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69380641_69386962_69387084_69398230
WTC11_00026149	chr14	-	4338	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	-28	-128	-28	128	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAGGCTCAAGATATCAT	-69574641	True	NA	NA	False	TATAAA	-34	NA	69574899	69569670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69573651_69574541
WTC11_00026150	chr14	-	887	2	Genic_Genomic	ENSG00000242071.3	novel	801	1	NA	NA	0	1450	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTAATCAT	-69885655	True	NA	NA	False	NA	NA	NA	69886140	69883889	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_69883919_69885282
WTC11_00026151	chr14	-	911	2	Genic_Genomic	ENSG00000242071.3	novel	801	1	NA	NA	-23	1450	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTAATCAT	NA	False	NA	NA	False	NA	NA	NA	69886163	69883889	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_69883919_69885281
WTC11_00026152	chr14	-	897	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	-23	-73	-23	73	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGTTCGAAGGAGAGA	NA	False	NA	NA	False	ATTAAA	-34	NA	69886163	69885266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69885300_69886200
WTC11_00026153	chr14	-	282	3	Antisense	novelGene_ENSG00000259033.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACCTCAGATGGTGGAA	-70301427	False	NA	NA	False	NA	NA	NA	70301498	70278627	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_70278719_70299003_70299087_70301390
WTC11_00026154	chr14	-	1670	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	-1	0	1	multi-exon	FALSE	canonical	3	2297	junction_3	72.6008876590975	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAGTGATAATTTGTGA	-70339999	True	NA	-9	True	AATAAA	-18	NA	70359683	70325079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
WTC11_00026155	chr14	-	978	2	FSM	ENSG00000133983.16	ENST00000554366.5	447	2	-531	0	-531	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	-70328749	False	NA	-31	True	AATAAA	-24	NA	70328761	70326067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70328165
WTC11_00026156	chr14	-	631	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	-4	0	4	multi-exon	FALSE	canonical	3	290	junction_2	1080	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-70340016	True	NA	-27	True	AATAAA	-28	NA	70359700	70326063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70329173_70329237_70359518
WTC11_00026159	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	15.9234278833282	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-70412392	True	NA	-17	True	AATAAA	-21	NA	70417090	70366498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
WTC11_00026161	chr14	-	4320	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	2	-1971	0	7	multi-exon	FALSE	canonical	3	178	junction_2	21.266050361061	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACTTTGTTAGGGC	-70596399	True	NA	3	True	AATAAA	-23	NA	70600653	70581249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
WTC11_00026163	chr14	-	1292	7	NIC	ENSG00000133997.12	novel	975	9	NA	NA	0	-154	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	79.1257789148953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTCATCATGACTTT	-70596389	True	NA	-15	True	AATAAA	-13	NA	70600643	70584239	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_70584944_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
WTC11_00026165	chr14	-	881	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	-19	0	19	multi-exon	FALSE	canonical	3	191	junction_4	23.2217570394662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAACAT	-70596410	True	NA	NA	False	NA	NA	NA	70600664	70592491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
WTC11_00026166	chr14	-	1242	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	-50	-99	-15	32	multi-exon	FALSE	canonical	3	191	junction_3	15.7973274814304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACATAGGAGAGACAGTG	-70596451	True	NA	NA	False	NA	NA	NA	70600705	70592478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
WTC11_00026167	chr14	-	11752	12	NNC	ENSG00000006432.16	novel	11511	12	NA	NA	-267	31408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.56594233741	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGATACCACGTTATAA	NA	False	NA	NA	False	NA	NA	NA	70809801	70691117	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_70691142_70722527_70730865_70732538_70733343_70734385_70734499_70738244_70738399_70740041_70740165_70742350_70742592_70748828_70749005_70749932_70750082_70761001_70761183_70800666_70801081_70808765
WTC11_00026169	chr14	-	758	1	FSM	ENSG00000274818.1	ENST00000616634.1	455	1	-310	7	-310	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTGAAATTTGAGTT	-70907352	False	NA	-16	True	AATAAA	-10	NA	70907421	70906663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70906700_70907400
WTC11_00026170	chr14	-	4386	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	-6	0	6	multi-exon	FALSE	canonical	3	41	junction_10	9.78360916351746	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGCTCTTTCCTCT	-73026134	True	NA	-5	True	CATAAA	-21	NA	73027106	72969444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
WTC11_00026171	chr14	-	351	2	FSM	ENSG00000165861.14	ENST00000556761.1	545	2	248	-54	248	54	multi-exon	FALSE	canonical	3	70	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGGGCTGTCACTTTG	NA	False	NA	NA	False	NA	NA	NA	72974959	72974023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_72974194_72974778
WTC11_00026173	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	-73245841	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73245245_73245523
WTC11_00026174	chr14	-	2920	4	ISM	ENSG00000133961.21	ENST00000535282.5	3198	9	68596	-331	0	228	3prime_fragment	FALSE	canonical	3	133	junction_1	66.81483534532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTATATTCCAGACC	-73287144	True	NA	NA	False	AATAGA	-34	NA	73287173	73274878	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109
WTC11_00026175	chr14	-	4138	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	24	-558	0	449	multi-exon	FALSE	canonical	3	129	junction_1	65.147428959246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGCCAAAATCTGGTTT	-73452277	True	NA	NA	False	NA	NA	NA	73458522	73274657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
WTC11_00026176	chr14	-	3659	12	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_10	74.5037577398306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	-73452332	True	NA	96	True	NA	NA	NA	73458577	73275106	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
WTC11_00026179	chr14	-	3553	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	-6	0	0	multi-exon	FALSE	canonical	3	99	junction_7	78.5552392895261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGGGCTGTTCTT	-73452277	True	NA	-7	True	AATAAA	-21	NA	73458522	73275209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
WTC11_00026180	chr14	-	3545	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	58	-566	0	0	multi-exon	FALSE	canonical	3	133	junction_1	60.5427244811737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	-73452277	True	NA	96	True	NA	NA	NA	73458522	73275106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
WTC11_00026192	chr14	-	620	2	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	107	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTTTTGACAGTC	-73633710	False	124	NA	False	ATTAAA	-4	NA	73633834	73616703	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73617211_73633721
WTC11_00026193	chr14	-	703	2	FSM	ENSG00000258603.5	ENST00000617980.1	408	2	-272	-23	223	23	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTCAATACAGTGACCA	-73634089	False	NA	NA	False	AAAACA	-35	NA	73634213	73619666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73619817_73633660
WTC11_00026194	chr14	-	1579	2	NNC	ENSG00000156030.14	novel	7721	12	NA	NA	4948	20073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAACAAGTACCAAGTAGA	-73716665	False	NA	NA	False	NA	NA	NA	73716676	73695048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73695073_73715121
WTC11_00026195	chr14	-	1580	2	NNC	ENSG00000156030.14	novel	5314	7	NA	NA	4948	20073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAACAAGTACCAAGTAGA	-73716665	False	NA	NA	False	NA	NA	NA	73716676	73695048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73695075_73715122
WTC11_00026196	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-73712655	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73711800_73714400
WTC11_00026197	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9.58795540711829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-74018510	True	NA	-3	True	AATAAA	-19	NA	74019288	73963229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
WTC11_00026201	chr14	-	446	4	FSM	ENSG00000187097.13	ENST00000557681.1	452	4	0	6	0	-6	multi-exon	FALSE	canonical	3	6	junction_1	14.613540144522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTGATGTATTTGTT	-74018493	True	NA	NA	False	CATAAA	-18	NA	74019271	74008935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74009193_74011090_74011151_74015823_74015931_74019249
WTC11_00026202	chr14	-	5709	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	6	-253	0	253	multi-exon	TRUE	canonical	3	156	junction_3	11.3814405978613	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGAGGTGAGTGGATC	-74080738	True	NA	NA	False	NA	NA	NA	74084447	74056593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
WTC11_00026203	chr14	-	828	6	FSM	ENSG00000119711.13	ENST00000554231.5	1323	6	0	495	0	173	multi-exon	FALSE	canonical	3	162	junction_1	5.87877538267963	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGCCCTTATGCATAT	-74080783	True	NA	NA	False	ATTAAA	-24	NA	74084492	74071194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
WTC11_00026204	chr14	-	2268	17	NNC	ENSG00000119688.21	novel	3035	19	NA	NA	0	16002	intron_retention	FALSE	non_canonical	0	0	junction_1	105.884297112461	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGTGGAGACTGCAC	-74297940	True	NA	NA	False	NA	NA	NA	74302934	74269266	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_74269294_74285981_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295975_74296332_74296450_74297929_74298070_74302874
WTC11_00026205	chr14	-	2257	19	NNC	ENSG00000119688.21	novel	3035	19	NA	NA	0	16002	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.506490059133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGTGGAGACTGCAC	-74297975	True	NA	NA	False	NA	NA	NA	74302969	74269266	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_74269295_74285981_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
WTC11_00026206	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	75.2898104364432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	-74297940	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
WTC11_00026207	chr14	-	2336	17	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_16	86.9335234532686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74297916	True	NA	-31	True	ATTAAA	-3	NA	74302910	74285995	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
WTC11_00026208	chr14	-	2189	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_17	84.8679821514785	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74297940	True	NA	-31	True	ATTAAA	-3	NA	74302934	74285995	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
WTC11_00026209	chr14	-	2354	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	-18	0	0	multi-exon	FALSE	canonical	3	85	junction_15	70.4787201926936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74297943	True	NA	-31	True	ATTAAA	-3	NA	74302937	74285995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
WTC11_00026224	chr14	-	442	1	FSM	ENSG00000270000.1	ENST00000602790.1	431	1	-215	204	-215	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTCAGGGGTACTTGT	-74472553	False	NA	NA	False	AATAAA	-24	NA	74472575	74472133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74472100_74472600
WTC11_00026225	chr14	-	875	5	FSM	ENSG00000119655.11	ENST00000434013.6	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	667.609354338299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCATCCATATGCCTCT	-74474939	True	NA	NA	False	NA	NA	NA	74493307	74476191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74476593_74480701_74480780_74484414_74484588_74486328_74486437_74493192
WTC11_00026226	chr14	-	1338	5	FSM	ENSG00000119655.11	ENST00000555619.6	821	5	0	-517	0	-200	multi-exon	FALSE	canonical	3	1457	junction_4	70.5208302560314	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTACAGGGATTACAACCC	-74474937	True	NA	NA	False	NA	NA	NA	74493305	74479422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74480289_74480701_74480780_74484414_74484588_74486328_74486437_74493192
WTC11_00026227	chr14	-	585	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	-2	0	0	multi-exon	TRUE	canonical	3	29	junction_2	679.861423788374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCTGTGGTCTTCTCC	-74493201	False	NA	-5	True	AATAAA	-29	NA	74493242	74479939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
WTC11_00026228	chr14	-	5423	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	-6	0	6	multi-exon	TRUE	canonical	3	52	junction_13	12.37525007442	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGCTGCTTTAAAT	-74711805	True	NA	0	True	AATAAA	-19	NA	74713080	74661249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
WTC11_00026229	chr14	-	5410	20	FSM	ENSG00000119682.18	ENST00000681099.1	5409	20	9	-10	-1	4	multi-exon	FALSE	canonical	3	7	junction_16	18.1820586738061	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGAGTGGCTGCTTTAA	-74711824	True	NA	-2	True	AATAAA	-17	NA	74713099	74661251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684483_74684681_74685599_74685661_74692040_74692329_74712932
WTC11_00026232	chr14	-	2196	13	FSM	ENSG00000119682.18	ENST00000469797.5	2196	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	5.13701166914081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAAAATATAAGCTAA	-74711792	True	NA	NA	False	NA	NA	NA	74713067	74670641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
WTC11_00026234	chr14	-	3535	3	FSM	ENSG00000198208.12	ENST00000553646.1	3535	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGTTCTCGCTTCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	74910665	74905643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74907531_74908849_74908933_74909100
WTC11_00026236	chr14	-	1743	7	FSM	ENSG00000119630.14	ENST00000555567.6	1740	7	0	-3	0	3	multi-exon	FALSE	canonical	3	22	junction_1	6.07590871118606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTAGTGGGTGTGTCTT	-74955386	True	NA	-1	True	AATAAA	-21	NA	74955597	74941830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
WTC11_00026237	chr14	-	1699	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.1161049846888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	-74955415	True	NA	-11	True	AATAAA	-11	NA	74955626	74941840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
WTC11_00026239	chr14	-	7810	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	10	0	-10	multi-exon	FALSE	canonical	3	23	junction_8	15.3104448734262	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTCCTTTTTCCTT	-75050287	True	NA	-21	True	AATAAA	-5	NA	75051467	75013784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
WTC11_00026240	chr14	-	7803	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	16	0	-10	multi-exon	FALSE	canonical	3	8	junction_6	19.2074365763553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTCCTTTTTCCTT	NA	False	NA	-21	True	AATAAA	-5	NA	75051532	75013784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
WTC11_00026241	chr14	-	1736	2	FSM	ENSG00000119684.16	ENST00000555415.1	700	2	-269	-767	-269	378	multi-exon	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAAAAAGCCAGCTGG	NA	False	NA	NA	False	ACTAAA	-18	NA	75019381	75016018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75017202_75018828
WTC11_00026242	chr14	-	586	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	17	-23	0	17	multi-exon	FALSE	canonical	3	298	junction_2	14	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGAACTTCCTTTTG	-75060540	True	NA	0	True	AATAAA	-39	NA	75064007	75053219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75053660_75063469_75063562_75063953
WTC11_00026243	chr14	-	673	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	-23	0	17	multi-exon	FALSE	canonical	3	26	junction_1	128.222029655161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGAACTTCCTTTTG	-75060548	True	NA	0	True	AATAAA	-39	NA	75064015	75053219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
WTC11_00026245	chr14	-	7308	23	Fusion	ENSG00000119640.9_ENSG00000119638.14	novel	8278	22	NA	NA	0	17	multi-exon	FALSE	non_canonical	0	0	junction_1	25.9753936328242	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGAACTTCCTTTTG	-75123655	True	NA	0	True	AATAAA	-39	NA	75126964	75053219	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_75055105_75082123_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
WTC11_00026246	chr14	-	631	2	NIC	ENSG00000119640.9	novel	789	3	NA	NA	60	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75069146	True	NA	-23	True	AATAAA	-16	NA	75069423	75053242	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_75053660_75069209
WTC11_00026247	chr14	-	654	4	NNC	ENSG00000119640.9	novel	650	4	NA	NA	8	-15	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	126.720164141308	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAGAACCTTCTGCTT	-75060532	True	NA	-38	True	AATAAA	-1	NA	75063999	75053257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75053660_75056446_75056561_75063469_75063562_75063953
WTC11_00026250	chr14	-	6010	22	FSM	ENSG00000119638.14	ENST00000678531.1	6010	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_21	25.417422203558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	-75123731	True	NA	-21	True	AATAAA	-11	NA	75127040	75081410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126904
WTC11_00026251	chr14	-	8278	22	FSM	ENSG00000119638.14	ENST00000238616.10	8278	22	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	18.3285708099816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCTATTTAAATA	-75123739	True	NA	NA	False	ATTAAA	-16	NA	75127048	75079352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
WTC11_00026254	chr14	-	1539	11	NIC	ENSG00000119638.14	novel	2667	9	NA	NA	2	754	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	19.4010309004444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATAAGACCTCTTTA	-75123729	True	NA	NA	False	AATAAA	-16	NA	75127038	75107515	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_75107756_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
WTC11_00026256	chr14	-	4136	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	-27	0	27	multi-exon	FALSE	canonical	3	1841	junction_2	41.4276477729547	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATGTCTGGATTGGTG	-75147686	True	NA	-5	True	AATAAA	-43	NA	75176612	75131441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
WTC11_00026257	chr14	-	3937	1	FSM	ENSG00000259319.2	ENST00000560419.1	4059	1	104	18	53	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCCATACAAATGCAGC	-75427589	False	NA	NA	False	AATAAA	-3	NA	75427637	75423700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75423700_75427600
WTC11_00026258	chr14	-	1208	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	34	57984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	532.418106378812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	-75649576	True	NA	NA	False	NA	NA	NA	75660842	75591806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591832_75650893_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
WTC11_00026259	chr14	-	1235	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	0	57984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	532.418106378812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75591806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591832_75650900_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
WTC11_00026260	chr14	-	1238	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	0	57984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	532.418106378812	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75591806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591832_75650897_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
WTC11_00026261	chr14	-	1169	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	-566	57984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	654.880935743285	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	-75661410	False	NA	NA	False	NA	NA	NA	75661442	75591806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591832_75650893_75651635_75651770_75651890_75654881_75654977_75657369_75657534_75661417
WTC11_00026262	chr14	-	474	1	FSM	ENSG00000242951.1	ENST00000489251.1	402	1	2	-74	2	74	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAACACAAAAACAAACA	NA	False	NA	NA	False	AATAAA	-16	NA	75596204	75595730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75595700_75596200
WTC11_00026263	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_2	74.7813479418498	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75649790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
WTC11_00026264	chr14	-	3356	7	FSM	ENSG00000119699.8	ENST00000238682.8	3431	7	0	75	0	-56	multi-exon	FALSE	canonical	1	2	junction_3	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGGCATCCTGGATGA	-75981928	True	NA	NA	False	AATAAA	-4	NA	75981995	75958171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75959346_75960922_75961077_75963315_75963488_75965587_75965696_75971125_75971256_75971554_75971719_75980541
WTC11_00026265	chr14	-	1684	2	FSM	ENSG00000258301.3	ENST00000556072.2	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGCTGGTCTCCAC	NA	False	NA	0	True	AATAAA	-18	NA	76786724	76781732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_76782777_76786084
WTC11_00026269	chr14	-	440	3	NIC	ENSG00000288762.1	novel	693	5	NA	NA	16	0	combination_of_known_splicesites	TRUE	canonical	3	33	junction_2	8.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATTTAATATATGCTC	-76948350	True	NA	-3	True	AATAAA	-22	NA	76948744	76927973	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_76928224_76928424_76928514_76948643
WTC11_00026270	chr14	-	4167	1	FSM	ENSG00000119669.5	ENST00000238647.5	4166	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGAGTCAGCAATTTT	-77020889	True	NA	-11	True	AATAAA	-17	NA	77028708	77024541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77024500_77028700
WTC11_00026271	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	3.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-77135276	True	NA	-4	True	AATAAA	-21	NA	77141791	77131269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77133949_77139212_77139753_77141602
WTC11_00026272	chr14	-	1775	4	FSM	ENSG00000165553.5	ENST00000298352.5	1778	4	0	3	0	-3	multi-exon	FALSE	canonical	1	4	junction_1	1.4142135623731	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGCCTGATCTT	-77271180	True	NA	-4	True	AATAAA	-20	NA	77271206	77265485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77266671_77268465_77268586_77269214_77269327_77270848
WTC11_00026273	chr14	-	5649	20	FSM	ENSG00000009830.13	ENST00000452340.7	5647	20	0	-2	0	0	multi-exon	TRUE	canonical	3	53	junction_16	16.0668616823986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	-77320662	False	NA	-3	True	AATAAA	-17	NA	77320704	77274955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77277482_77278393_77278509_77278728_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
WTC11_00026274	chr14	-	4393	17	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_13	20.9596897341063	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	-77319573	True	NA	-3	True	AATAAA	-17	NA	77320860	77274955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77304691_77304801_77306336_77306442_77311948_77312034_77320433
WTC11_00026275	chr14	-	4875	21	FSM	ENSG00000009830.13	ENST00000261534.9	4875	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_17	15.7245031718016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	-77319596	True	NA	-3	True	AATAAA	-17	NA	77320883	77274955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
WTC11_00026276	chr14	-	1544	9	FSM	ENSG00000009830.13	ENST00000555134.2	1530	9	0	-14	0	0	multi-exon	FALSE	canonical	3	15	junction_3	28.341389785965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAAAATAGTCCAGGCT	NA	False	NA	-45	True	AATACA	-32	NA	77285603	77277009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77277482_77278393_77278509_77278728_77278870_77279536_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480
WTC11_00026278	chr14	-	333	3	FSM	ENSG00000009830.13	ENST00000682128.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGCCACCCACCTGGA	NA	False	NA	NA	False	NA	NA	NA	77279928	77278728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77278870_77279536_77279623_77279822
WTC11_00026279	chr14	-	1686	18	FSM	ENSG00000009830.13	ENST00000683828.1	1686	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	23.1214635376865	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCTACTTCCACCACTA	-77320508	False	NA	NA	False	NA	NA	NA	77320550	77278783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
WTC11_00026282	chr14	-	7769	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	-8	0	8	multi-exon	FALSE	canonical	3	41	junction_3	5.84465567848098	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGTTATATTTTAAT	-77375584	True	NA	-1	True	AATAAA	-24	NA	77377094	77335020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
WTC11_00026283	chr14	-	2515	21	NNC	ENSG00000151445.16	novel	2761	21	NA	NA	0	79912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.8447177484471	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGACCAGCAGTCCATC	-77456242	True	NA	NA	False	AATAAA	-42	NA	77457561	77346762	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_77346787_77426673_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
WTC11_00026284	chr14	-	2777	20	FSM	ENSG00000151445.16	ENST00000553888.5	2934	20	157	0	113	0	multi-exon	FALSE	canonical	2	7	junction_19	24.0416305603426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456129	False	NA	-8	True	AATAAA	-24	NA	77457448	77426674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094
WTC11_00026287	chr14	-	2535	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	-5	0	5	multi-exon	FALSE	canonical	3	86	junction_7	12.150715583729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTGGTGGTTTTGTGT	-77456282	True	NA	-3	True	AATAAA	-29	NA	77457601	77426669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
WTC11_00026290	chr14	-	1377	13	NIC	ENSG00000151445.16	novel	444	5	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	45.0964244702393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAGTTGTATTATTAA	-77456237	True	NA	2	True	AATAAA	-17	NA	77457556	77440262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77440497_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457414_77457494
WTC11_00026291	chr14	-	2970	7	FSM	ENSG00000100593.18	ENST00000342219.9	2940	7	-36	6	-36	-6	multi-exon	FALSE	canonical	1	4	junction_2	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATTCTGCCTGATGAA	-77498744	True	NA	-3	True	AATAAA	-11	NA	77498852	77474399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77476113_77478241_77478326_77478574_77478716_77482321_77482668_77484322_77484566_77484676_77484920_77498652
WTC11_00026292	chr14	-	8038	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	-4	0	4	multi-exon	FALSE	canonical	3	145	junction_6	21.7023440102029	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTATTCATTCAACCA	-77610875	True	NA	3	True	AATAAA	-20	NA	77616637	77505992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
WTC11_00026295	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_13	76.5857990451534	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-77751912	True	NA	-20	True	AATAAA	-16	NA	77761156	77717598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
WTC11_00026299	chr14	-	395	1	FSM	ENSG00000239438.1	ENST00000491713.1	339	1	-126	70	-126	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGACCAAACACCCTCA	NA	False	NA	NA	False	NA	NA	NA	78231745	78231350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_78231400_78231700
WTC11_00026301	chr14	-	429	4	FSM	ENSG00000100629.17	ENST00000553717.1	501	4	72	0	32	0	multi-exon	FALSE	canonical	3	22	junction_1	7.87400787401181	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAATATGGGAGCTAAAA	NA	False	NA	NA	False	AATGAA	-26	NA	80530928	80497496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_80497583_80504911_80505021_80526868_80526983_80530808
WTC11_00026305	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	3.59687364248454	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-81210752	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
WTC11_00026306	chr14	-	675	1	FSM	ENSG00000270343.1	ENST00000603734.1	675	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGGTCTGTCTCCATTG	-81260221	False	NA	NA	False	NA	NA	NA	81260239	81259564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81259600_81260200
WTC11_00026307	chr14	-	10900	8	NIC	ENSG00000140022.14	novel	11084	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	7.10848874549984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACTATGCCAAATTTAA	-81431260	True	NA	74	True	AATAAA	-17	NA	81436452	81260651	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_81268498_81270669_81270873_81276900_81278740_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
WTC11_00026308	chr14	-	11071	9	FSM	ENSG00000140022.14	ENST00000553821.3	11084	9	13	0	7	0	multi-exon	FALSE	canonical	3	10	junction_4	8.02729717900116	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACTATGCCAAATTTAA	-81431260	True	NA	74	True	AATAAA	-17	NA	81436452	81260651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81268498_81270669_81270873_81276900_81278740_81324016_81324188_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
WTC11_00026309	chr14	-	2100	2	FSM	ENSG00000140022.14	ENST00000555284.1	2362	2	79	183	79	-105	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTCTTATTCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	81278739	81270611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81270873_81276900
WTC11_00026311	chr14	-	7870	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	49	0	-49	multi-exon	FALSE	canonical	3	110	junction_10	15.2390124351941	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTAACTGAATTTGGAAT	-81532593	True	NA	NA	False	NA	NA	NA	81533853	81471595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
WTC11_00026312	chr14	-	309	2	FSM	ENSG00000071537.14	ENST00000554293.1	767	2	131	327	131	-327	multi-exon	FALSE	canonical	3	132	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGTACCTCTTTTCATTA	-81484384	False	NA	NA	False	NA	NA	NA	81484397	81479604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81479741_81484224
WTC11_00026314	chr14	-	310	1	FSM	ENSG00000259032.2	ENST00000554405.2	352	1	25	17	25	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCTTGCGGGGTAACC	NA	False	NA	NA	False	NA	NA	NA	82693030	82692720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_82692700_82693000
WTC11_00026315	chr14	-	585	3	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATTATCTGCTTCCCTG	-87240230	True	NA	NA	False	NA	NA	NA	87240487	87237995	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_87238508_87239074_87239110_87240449
WTC11_00026316	chr14	-	3793	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	1	0	1	0	multi-exon	FALSE	canonical	3	63	junction_6	12.9638921624642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-87992218	True	NA	-2	True	ATTAAA	-18	NA	87993181	87933013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
WTC11_00026318	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	11.3442213494224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-87992191	True	NA	2	True	AATAAA	-14	NA	87993154	87963313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
WTC11_00026320	chr14	-	6568	19	FSM	ENSG00000070778.13	ENST00000556564.6	6443	19	-125	0	-125	0	multi-exon	TRUE	canonical	3	21	junction_15	7.91622805802528	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTTGAAATAGTATC	-88555069	False	NA	-3	True	AATAAA	-16	NA	88555132	88465777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_88468266_88468915_88469077_88469498_88469734_88469921_88470051_88472243_88472466_88473664_88473803_88478919_88480353_88485075_88485161_88485781_88485843_88496412_88496493_88497202_88497291_88500782_88500872_88501280_88501369_88504424_88504496_88505303_88505372_88507922_88508021_88517091_88517262_88550237_88550620_88554650
WTC11_00026322	chr14	-	8026	6	FSM	ENSG00000053254.16	ENST00000557258.6	8021	6	0	-5	0	0	multi-exon	FALSE	canonical	3	99	junction_2	35.7737333807921	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTGTTATGTGTGCTGC	-89411738	True	NA	-3	True	AATAAA	-36	NA	89417233	89156171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89416870
WTC11_00026323	chr14	-	8088	7	NIC	ENSG00000053254.16	novel	8021	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	60.7520004243116	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGTAGTGTTATGTGT	-89411742	True	NA	-8	True	AATAAA	-31	NA	89417237	89156176	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_89162970_89180700_89180807_89190386_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89416870
WTC11_00026324	chr14	-	2540	6	FSM	ENSG00000053254.16	ENST00000261302.9	2542	6	2	0	2	0	multi-exon	FALSE	canonical	3	40	junction_2	62.5856213518728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTGTGGTGTATTTTT	-89411923	False	NA	-14	True	NA	NA	NA	89412490	89161360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933
WTC11_00026329	chr14	-	851	4	FSM	ENSG00000053254.16	ENST00000555855.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	64.9940168186443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACACCCACACGTGTT	-89612647	True	NA	NA	False	AAAAAG	-10	NA	89619137	89350727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89350809_89411933_89412491_89486568_89486672_89619027
WTC11_00026330	chr14	-	3138	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	-2	0	2	multi-exon	FALSE	canonical	3	112	junction_5	9.48683298050514	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAATGGTATCATTGAG	-89951924	True	NA	NA	False	AATAAA	-22	NA	89954730	89794666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
WTC11_00026331	chr14	-	3387	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	-191	-480	2	2	multi-exon	FALSE	canonical	3	7	junction_5	49.8397431775084	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAATGGTATCATTGAG	-89951942	True	NA	NA	False	AATAAA	-22	NA	89954748	89794666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
WTC11_00026335	chr14	-	19247	20	FSM	ENSG00000165914.15	ENST00000328459.11	19471	20	26	198	26	-198	multi-exon	FALSE	canonical	3	44	junction_13	7.93707943244223	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCTAGCCAGAAACCC	-90815340	True	NA	NA	False	NA	NA	NA	90816404	90524761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90541590_90578105_90578309_90593485_90593627_90610741_90610840_90617928_90618046_90644047_90644209_90646950_90647024_90652840_90652899_90654992_90655111_90657173_90657279_90658303_90658388_90676522_90676661_90680471_90680536_90689539_90689713_90695499_90695579_90730074_90730197_90744791_90744923_90780737_90780907_90786173_90786329_90816174
WTC11_00026336	chr14	-	523	4	FSM	ENSG00000165914.15	ENST00000556749.1	526	4	0	3	0	-3	multi-exon	FALSE	canonical	3	60	junction_1	2.62466929133727	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTTCTCTAATGTTTC	NA	False	NA	NA	False	NA	NA	NA	90657447	90646950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90647024_90652840_90652899_90654992_90655111_90657173
WTC11_00026337	chr14	-	555	4	FSM	ENSG00000165914.15	ENST00000553948.1	630	4	75	0	26	0	multi-exon	FALSE	canonical	2	5	junction_2	26.3860232362177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGAGAAGCTGCCTAT	-90815340	True	NA	NA	False	NA	NA	NA	90816404	90744917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90744923_90780737_90780903_90786173_90786329_90816174
WTC11_00026338	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	4.7169905660283	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-91060095	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
WTC11_00026339	chr14	-	7625	30	FSM	ENSG00000015133.20	ENST00000389857.11	7519	30	-105	-1	-81	1	multi-exon	FALSE	canonical	3	34	junction_23	23.5490229177454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTCTGGCTTTCCTCAC	-91417894	False	NA	-15	True	AATAAA	-18	NA	91417925	91271321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
WTC11_00026342	chr14	-	5019	6	NIC	ENSG00000100796.18	novel	2515	15	NA	NA	-2334	497	combination_of_known_junctions	FALSE	canonical	3	137	junction_5	208.762640335861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAGAAAAACTCTTA	-91468674	False	NA	NA	False	NA	NA	NA	91468689	91457010	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91466260
WTC11_00026343	chr14	-	4416	15	FSM	ENSG00000100796.18	ENST00000554943.6	4416	15	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_8	108.982047763354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCACCTGTCACCTTATT	-91507278	False	NA	-5	True	AATAAA	-16	NA	91510310	91457507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
WTC11_00026344	chr14	-	5107	15	FSM	ENSG00000100796.18	ENST00000554684.5	4108	15	-399	-600	11	497	multi-exon	FALSE	canonical	3	329	junction_8	94.5284753556367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAGAAAAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	91510543	91457010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
WTC11_00026347	chr14	-	3161	15	FSM	ENSG00000100796.18	ENST00000554308.5	2515	15	-646	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	182.40011244626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTTGACTCCCATT	-91506703	True	NA	NA	False	AATACA	-28	NA	91510300	91461380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91466260_91466417_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
WTC11_00026353	chr14	-	4708	12	FSM	ENSG00000165929.13	ENST00000340892.9	4708	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	19.8760622669499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTTCTTTCTGTGTT	-91836058	False	NA	-79	True	AATAAA	-43	NA	91836440	91780178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836182
WTC11_00026354	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	7.2738635475991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	-91836065	True	NA	-1	True	AATAAA	-31	NA	91836447	91780954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
WTC11_00026356	chr14	-	2620	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	7	-2	4	2	multi-exon	FALSE	canonical	3	10	junction_5	3.85227205685164	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGGTTCATTTTGA	-91947490	True	NA	1	True	ATTAAA	-15	NA	91947687	91869408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
WTC11_00026357	chr14	-	9998	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	-2	0	2	multi-exon	FALSE	canonical	3	53	junction_15	11.0103360530004	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACTTTTTCTTTAGAA	-92036937	True	NA	1	True	AATAAA	-21	NA	92040059	91965988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
WTC11_00026358	chr14	-	348	4	NNC	ENSG00000183648.11	novel	317	3	NA	NA	0	86842	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1210.96554680782	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTGGGCAATGCAGT	-92108457	True	NA	NA	False	NA	NA	NA	92121706	92029279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_92029311_92116122_92116230_92117497_92117643_92121641
WTC11_00026359	chr14	-	350	4	NNC	ENSG00000183648.11	novel	317	3	NA	NA	0	86845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1210.96554680782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGCAATGCAGTCAG	-92108457	True	NA	NA	False	NA	NA	NA	92121706	92029276	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_92029315_92116127_92116230_92117497_92117643_92121641
WTC11_00026360	chr14	-	349	4	NNC	ENSG00000183648.11	novel	317	3	NA	NA	0	86845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1210.96554680782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGCAATGCAGTCAG	-92108457	True	NA	NA	False	NA	NA	NA	92121706	92029276	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_92029314_92116127_92116230_92117497_92117643_92121641
WTC11_00026361	chr14	-	415	3	FSM	ENSG00000066427.25	ENST00000568290.1	671	3	215	41	215	-41	multi-exon	FALSE	canonical	1	1	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACTGCCGTCCGCCTGC	NA	False	NA	-77	True	NA	NA	NA	92050431	92044846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92044959_92049602_92049815_92050340
WTC11_00026363	chr14	-	6884	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	41.9238595551507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102956	True	NA	-10	True	AATAAA	-20	NA	92106582	92058551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
WTC11_00026364	chr14	-	2572	10	FSM	ENSG00000066427.25	ENST00000359366.10	2572	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	74.5755065208377	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAAAATATCTTTT	-92102964	True	NA	NA	False	NA	NA	NA	92106590	92062785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096138_92096673_92096839_92106528
WTC11_00026365	chr14	-	1601	9	NIC	ENSG00000066427.25	novel	2572	10	NA	NA	0	299	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	93.7093245093571	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCATGTGCTTTCC	-92102954	True	NA	-6	True	AATAAA	-17	NA	92106580	92063581	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096138_92106528
WTC11_00026366	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	1	18	junction_8	70.427267446636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102974	True	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
WTC11_00026367	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	78.7204775153639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102984	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
WTC11_00026372	chr14	-	991	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	-379	-158	-186	158	multi-exon	FALSE	canonical	0	0	junction_2	1243.50374167332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTGAAACCCCGTCT	-92122091	False	NA	NA	False	NA	NA	NA	92122103	92115963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
WTC11_00026373	chr14	-	528	3	FSM	ENSG00000183648.11	ENST00000329559.8	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	2463	junction_2	100	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTTTCATACAAA	-92121491	True	NA	-4	True	AATAAA	-19	NA	92121917	92116122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497_92117643_92121641
WTC11_00026374	chr14	-	461	3	FSM	ENSG00000183648.11	ENST00000555441.5	458	3	0	-3	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTTTCATACAAA	-92121392	False	NA	-4	True	AATAAA	-19	NA	92121404	92116122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497_92117643_92121195
WTC11_00026375	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	138.176435301853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	-92745137	True	NA	-12	True	AATAAA	-23	NA	92748612	92703806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
WTC11_00026377	chr14	-	1923	13	NIC	ENSG00000100600.15	novel	1980	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	132.898143954935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-92745163	True	NA	-14	True	AATAAA	-21	NA	92748638	92703808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_92704362_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
WTC11_00026378	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	137.562006221033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	-92745170	True	NA	-44	True	NA	NA	NA	92748645	92703838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
WTC11_00026384	chr14	-	3035	9	FSM	ENSG00000100605.17	ENST00000555495.5	3035	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	133.826146548423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACGTGTTTACACAT	-93115066	False	NA	-23	True	AATAAA	-20	NA	93115279	92939861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93115068
WTC11_00026385	chr14	-	609	7	FSM	ENSG00000100605.17	ENST00000553452.5	609	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	145.430873231542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGGAAGAAGATCTGA	-93115609	True	NA	NA	False	NA	NA	NA	93115822	92962354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115218_93115771
WTC11_00026386	chr14	-	2410	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	-3	0	3	multi-exon	FALSE	canonical	3	90	junction_1	5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGTTTTGTTTATA	-93184012	True	NA	-19	True	AATAAA	-19	NA	93184897	93182195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93184363_93184558_93184714_93184809
WTC11_00026387	chr14	-	2502	2	FSM	ENSG00000165943.5	ENST00000556883.1	2529	2	28	-1	2	1	multi-exon	FALSE	canonical	3	90	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTCTGTTTTGTTTA	-93184010	True	NA	-21	True	AATAAA	-17	NA	93184895	93182197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93184363_93184558
WTC11_00026388	chr14	-	1127	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	-2	0	2	multi-exon	FALSE	canonical	3	140	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTTTCTTTT	NA	False	NA	-1	True	AATATA	-16	NA	93207065	93202891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93203783_93206829
WTC11_00026389	chr14	-	6818	3	ISM	ENSG00000011114.15	ENST00000355125.3	6822	8	44637	-1	44637	1	3prime_fragment	FALSE	canonical	3	48	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGAGTTGGATACAGTC	NA	False	NA	-4	True	AATAAA	-16	NA	93249291	93237548	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_93243089_93245824_93246287_93248475
WTC11_00026390	chr14	-	8501	11	FSM	ENSG00000011114.15	ENST00000334746.10	8445	11	-56	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	9.4678403028357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGAGTTGGATACAGT	NA	False	NA	-5	True	AATAAA	-15	NA	93333092	93237549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93293857_93294938_93295969_93296158_93332819
WTC11_00026392	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	93333092	93287627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
WTC11_00026394	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_8	78.8336856933633	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	-94072811	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
WTC11_00026396	chr14	-	2781	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	-12	0	12	multi-exon	FALSE	canonical	1	5	junction_8	245.973544055047	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATTTCATAAATTAAAAA	-94072811	True	NA	31	True	NA	NA	NA	94081202	94050952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
WTC11_00026398	chr14	-	676	2	FSM	ENSG00000119632.4	ENST00000554909.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-94125445	False	NA	-10	True	AATAAA	-18	NA	94128977	94127780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94127993_94128513
WTC11_00026399	chr14	-	692	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	-179	3	0	-1	multi-exon	FALSE	canonical	3	398	junction_2	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTGTTTTGCTTCTT	-94126048	True	NA	-11	True	AATAAA	-17	NA	94129580	94127781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94127993_94128513_94128676_94129261
WTC11_00026400	chr14	-	458	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	-7	0	5	multi-exon	FALSE	canonical	3	318	junction_3	45.7626728046147	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTTCTTGCAGCTCT	-94126072	True	NA	-3	True	AATAAA	-25	NA	94129604	94127773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
WTC11_00026401	chr14	-	1486	5	FSM	ENSG00000186910.4	ENST00000334708.4	1486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.08972473588517	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGAGCAATCCTTAC	-94452755	False	NA	-25	True	AATAAA	-22	NA	94452800	94442463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94442810_94443077_94443226_94446330_94446605_94448131_94448778_94452728
WTC11_00026404	chr14	-	10205	27	NIC	ENSG00000100697.15	novel	10384	27	NA	NA	-1014	0	intron_retention	FALSE	canonical	3	7	junction_26	29.4216440073405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	NA	False	NA	-6	True	AATAAA	-16	NA	95134481	95086227	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95134360
WTC11_00026405	chr14	-	10384	27	FSM	ENSG00000100697.15	ENST00000343455.8	10384	27	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_26	19.3534548083217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	-95157444	False	NA	-6	True	AATAAA	-16	NA	95157529	95086227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157229
WTC11_00026406	chr14	-	10581	29	FSM	ENSG00000100697.15	ENST00000393063.6	7423	29	-139	-3019	-30	0	multi-exon	TRUE	canonical	3	39	junction_26	31.1437377005263	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	-95157474	False	NA	-6	True	AATAAA	-16	NA	95157559	95086227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95140658_95140760_95141682_95141749_95157229
WTC11_00026408	chr14	-	12750	13	FSM	ENSG00000165959.12	ENST00000298912.9	12749	13	0	-1	0	1	multi-exon	TRUE	canonical	3	16	junction_6	5.49936865063214	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCGTTGATGATACTTA	-95319607	True	NA	0	True	TATAAA	-15	NA	95319908	95181938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95191733_95193848_95193920_95194535_95194597_95196497_95196695_95202837_95204464_95209394_95209478_95210685_95210880_95213218_95213410_95215640_95215734_95221690_95221775_95223759_95223856_95230071_95230134_95319710
WTC11_00026410	chr14	-	447	2	FSM	ENSG00000247092.8	ENST00000660378.2	449	2	0	2	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTCCTACCTGTGT	-95534875	False	NA	-32	True	ATTAAA	-16	NA	95534889	95532911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95533062_95534592
WTC11_00026411	chr14	-	275	1	FSM	ENSG00000252481.1	ENST00000516672.1	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTTTTTTTAAACT	-95533615	False	NA	-2	True	NA	NA	NA	95533629	95533354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95533400_95533600
WTC11_00026414	chr14	-	6861	39	ISM	ENSG00000066739.12	ENST00000359933.6	13162	42	18584	5459	18584	4802	3prime_fragment	TRUE	canonical	2	3	junction_35	3.77455029333264	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAAATCGATTTTGGT	NA	False	NA	91	True	NA	NA	NA	96344757	96284653	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_96285986_96289655_96289806_96290435_96290591_96290813_96290936_96291599_96291683_96292028_96292099_96294959_96295168_96295481_96295561_96302006_96302109_96303060_96303256_96304494_96304604_96305588_96305816_96306713_96306917_96309452_96309595_96311116_96311288_96311541_96311619_96312088_96312160_96313064_96313158_96313328_96313436_96315153_96315235_96315383_96315584_96316532_96316684_96317144_96317318_96317697_96317856_96322111_96322255_96322539_96322736_96323895_96323999_96325648_96325923_96328346_96328536_96328673_96328767_96329483_96329635_96331375_96331638_96332304_96332411_96332500_96332656_96333687_96333874_96334404_96334502_96341521_96341702_96343118_96343282_96344653
WTC11_00026417	chr14	-	1770	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	3	-261	3	261	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTGCAAACAGACTTAT	-96502086	True	NA	NA	False	ATTAAA	-7	NA	96502318	96500548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_96500500_96502300
WTC11_00026418	chr14	-	507	1	FSM	ENSG00000232573.1	ENST00000417615.1	423	1	0	-84	0	84	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGCAACTCCCTCCT	NA	False	NA	4	True	AATAAA	-45	NA	98973301	98972794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_98972800_98973300
WTC11_00026421	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_8	29.2759856082307	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	-99475858	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
WTC11_00026428	chr14	-	2603	5	FSM	ENSG00000259052.1_ENSG00000197119.13	ENST00000554224.5	1124	5	51	-1530	-6	188	multi-exon	FALSE	canonical	3	111	junction_3	159.679953344182	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTGAACACGCTGGTGCA	-100300300	True	NA	NA	False	AATGAA	-2	NA	100306496	100290927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100295625_100295698_100298841_100298886_100306198
WTC11_00026429	chr14	-	5174	2	FSM	ENSG00000197119.13	ENST00000554912.1	5169	2	0	-5	0	5	multi-exon	FALSE	canonical	3	480	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTTGCATATGG	-100290349	False	NA	-1	True	AATAAA	-24	NA	100296545	100291110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293
WTC11_00026430	chr14	-	2296	4	FSM	ENSG00000197119.13	ENST00000359232.8	2291	4	0	-5	0	5	multi-exon	FALSE	canonical	3	282	junction_2	82.4068497692327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTTGCATATGG	-100300248	True	NA	-1	True	AATAAA	-24	NA	100306444	100291110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100298841_100298886_100306198
WTC11_00026438	chr14	-	2735	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	-4	-41	0	3	multi-exon	FALSE	canonical	3	66	junction_9	261.118581453421	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTCTGTCTG	-100361897	False	13715	-5	True	AATAAA	-19	NA	100375612	100333786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
WTC11_00026439	chr14	-	2487	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	-21	0	9	multi-exon	FALSE	canonical	3	235	junction_9	208.457829468376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTGTCTGGGAGGT	-100362620	True	NA	1	True	AATAAA	-25	NA	100376335	100333780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
WTC11_00026440	chr14	-	3076	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	16	0	16	0	multi-exon	FALSE	canonical	3	515	junction_10	132.76957482797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-36	True	NA	NA	NA	100376789	100333817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
WTC11_00026442	chr14	-	2608	12	NIC	ENSG00000140105.18	novel	2080	12	NA	NA	12	-66	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	298.510960248413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAAATCTCAGGGAAG	-100362558	True	NA	-112	True	NA	NA	NA	100376273	100333893	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282_100375407_100376259
WTC11_00026456	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	1445.54983676749	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-102139181	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
WTC11_00026457	chr14	-	443	2	FSM	ENSG00000080824.19	ENST00000557089.1	694	2	251	0	251	0	multi-exon	FALSE	canonical	3	3795	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGCAAGATAATTAACATG	-102083967	False	NA	NA	False	NA	NA	NA	102083983	102083441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102083694_102083792
WTC11_00026466	chr14	-	6705	4	FSM	ENSG00000156381.9	ENST00000286918.9	6705	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	63.2051334061474	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGAATTTGCGAGTC	-102508190	True	NA	-8	True	AATAAA	-15	NA	102509776	102501766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102507943_102508474_102508550_102508640_102508847_102509528
WTC11_00026467	chr14	-	1413	3	FSM	ENSG00000156381.9	ENST00000560748.5	1413	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	58	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTATATATATTGATC	-102508213	True	NA	-34	True	NA	NA	NA	102509799	102506875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102507943_102508474_102508550_102509528
WTC11_00026468	chr14	-	2301	3	FSM	ENSG00000156381.9	ENST00000559404.5	1502	3	-564	-235	0	0	multi-exon	FALSE	canonical	3	105	junction_2	48.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTATATATATTGATC	-102508213	True	NA	-34	True	NA	NA	NA	102509799	102506875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102507943_102508474_102508550_102508640
WTC11_00026470	chr14	-	6844	37	FSM	ENSG00000198752.11	ENST00000361246.7	6844	37	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	7.73654746425475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCCGTTTGGATG	-103051768	True	NA	-3	True	AATAAA	-25	NA	103057549	102932379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954197_102954276_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
WTC11_00026471	chr14	-	6851	36	NIC	ENSG00000198752.11	novel	6844	37	NA	NA	-85	0	intron_retention	FALSE	canonical	3	10	junction_14	7.29808473617062	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCCGTTTGGATG	-103057617	False	NA	-3	True	AATAAA	-25	NA	103057634	102932379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
WTC11_00026473	chr14	-	1560	3	FSM	ENSG00000251533.2	ENST00000514902.2	1558	3	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_2	4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTCTTTTATTCATTG	-103188835	False	NA	-2	True	AATAAA	-15	NA	103189028	103187218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103188271_103188376_103188448_103188591
WTC11_00026475	chr14	-	746	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	-11	0	0	multi-exon	FALSE	canonical	3	91	junction_2	1282.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGAGTGGTGCCTC	-103521363	False	NA	-10	True	AATAAA	-18	NA	103521443	103519667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103520043_103520121_103520312_103521262
WTC11_00026476	chr14	-	1186	4	FSM	ENSG00000166165.14	ENST00000553528.5	1170	4	0	-16	0	0	multi-exon	FALSE	canonical	3	2346	junction_3	127.50947677199	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	-103521690	False	NA	-21	True	AATAAA	-7	NA	103521770	103519678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262
WTC11_00026480	chr14	-	1085	4	FSM	ENSG00000166165.14	ENST00000555659.5	755	4	28	-358	0	0	multi-exon	FALSE	canonical	3	1706	junction_3	238.917465990989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCCCTCTGCGCCC	-103455256	True	NA	NA	False	NA	NA	NA	103522802	103521262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103521951_103522022_103522178_103522300_103522506_103522765
WTC11_00026484	chr14	-	1417	2	FSM	ENSG00000166165.14	ENST00000553994.1	746	2	-106	-565	0	0	multi-exon	FALSE	canonical	3	2273	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCCCTCTGCGCCC	-103455256	True	NA	NA	False	NA	NA	NA	103522802	103521262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103522178_103522300
WTC11_00026485	chr14	-	4868	2	FSM	ENSG00000166170.12	ENST00000445922.2	4867	2	0	-1	0	1	multi-exon	TRUE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTGAGGTGTGTGT	-103562262	False	6139	0	True	AATAAA	-33	NA	103562318	103556543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103561193_103562099
WTC11_00026486	chr14	-	4691	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	-7	0	1	multi-exon	FALSE	canonical	3	214	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTGAGGTGTGTGT	-103556518	True	NA	0	True	AATAAA	-33	NA	103562657	103556543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103561193_103562615
WTC11_00026492	chr14	-	3024	8	FSM	ENSG00000126215.14	ENST00000553264.5	3018	8	15	-21	15	12	multi-exon	FALSE	canonical	3	205	junction_4	48.1481557067265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGCCAGGCACTGCTC	-103708525	False	NA	-13	True	AATAAA	-36	NA	103712089	103697596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465
WTC11_00026502	chr14	-	3461	8	FSM	ENSG00000088808.18	ENST00000556597.1	3473	8	0	12	0	-12	multi-exon	FALSE	canonical	1	2	junction_2	8.56666534317997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCACCCCGGCGGCTGT	NA	False	NA	-17	True	AATAAA	-3	NA	103746488	103733764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103735196_103736002_103736203_103738678_103738813_103738885_103739024_103739823_103740594_103741789_103742292_103742653_103742824_103746372
WTC11_00026503	chr14	-	5500	17	FSM	ENSG00000088808.18	ENST00000202556.14	5500	17	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.85101486923423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAACATATTGCACTAG	-103846969	True	NA	NA	False	AATAAA	-1	NA	103847575	103733194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103735196_103736002_103736203_103737693_103737861_103738678_103738813_103738885_103739024_103739823_103740594_103741789_103742292_103742653_103742824_103746372_103746554_103749793_103749935_103752999_103753197_103754069_103754245_103757649_103757752_103778744_103778822_103784794_103784915_103797370_103797519_103847298
WTC11_00026504	chr14	-	448	2	FSM	ENSG00000088808.18	ENST00000557744.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCCAGCCAGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	103742898	103742088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103742292_103742653
WTC11_00026505	chr14	-	856	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	-14	0	0	multi-exon	TRUE	canonical	3	53	junction_4	2249.991486095	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-103886856	True	NA	-15	True	AATAAA	-29	NA	103921501	103912287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
WTC11_00026512	chr14	-	2833	6	FSM	ENSG00000142208.18	ENST00000553506.5	2830	6	0	-3	0	0	multi-exon	FALSE	canonical	3	849	junction_5	38.2601620487943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104774644	False	NA	-4	True	AATAAA	-15	NA	104774680	104769348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454
WTC11_00026513	chr14	-	7880	4	FSM	ENSG00000142208.18	ENST00000557552.1	8396	4	519	-3	-374	0	multi-exon	FALSE	canonical	3	849	junction_3	43.1766397745612	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104778016	False	NA	-4	True	AATAAA	-15	NA	104778052	104769348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104772453_104772877_104773380_104773454
WTC11_00026514	chr14	-	4163	14	FSM	ENSG00000142208.18	ENST00000402615.6	3913	14	0	-250	0	247	multi-exon	FALSE	canonical	3	242	junction_13	175.059313701412	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCCTGGCTGGCCC	-104790584	False	NA	NA	False	NA	NA	NA	104794528	104769101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126
WTC11_00026515	chr14	-	2779	14	FSM	ENSG00000142208.18	ENST00000407796.7	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_13	143.630195767097	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104791804	True	NA	-4	True	AATAAA	-15	NA	104795748	104769348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
WTC11_00026516	chr14	-	3207	15	FSM	ENSG00000142208.18	ENST00000649815.2	2957	15	-3	-247	0	247	multi-exon	FALSE	canonical	3	59	junction_14	260.168312867667	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCCTGGCTGGCCC	-104791807	True	NA	NA	False	NA	NA	NA	104795751	104769101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
WTC11_00026517	chr14	-	2866	15	FSM	ENSG00000142208.18	ENST00000349310.7	2866	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	266.49600831716	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104791807	True	NA	-4	True	AATAAA	-15	NA	104795751	104769348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793211_104795483
WTC11_00026521	chr14	-	2869	13	FSM	ENSG00000142208.18	ENST00000554826.2	2857	13	0	-12	0	0	multi-exon	FALSE	canonical	3	365	junction_12	148.526723184752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCCAAATTCTTCAATAA	-104791598	False	NA	-39	True	AATATA	-13	NA	104795542	104769383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
WTC11_00026528	chr14	-	543	1	FSM	ENSG00000196183.5	ENST00000476944.2	856	1	362	-49	362	49	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGTAGAATGGCAACT	NA	False	NA	NA	False	AGTAAA	-24	NA	104836490	104835947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104835900_104836500
WTC11_00026531	chr14	-	5733	26	FSM	ENSG00000184916.9	ENST00000331782.8	5773	26	6	34	6	-34	multi-exon	TRUE	canonical	2	15	junction_25	7.5835611687386	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAACAAATGAATAAATGAA	-105168569	True	NA	NA	False	AAAAAG	-41	NA	105168770	105141028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105143171_105143481_105143639_105144929_105145062_105145730_105145974_105146384_105146501_105146610_105146725_105147325_105147412_105147499_105147528_105147771_105147889_105148115_105148230_105148325_105148440_105148744_105148859_105148936_105149090_105149169_105149321_105150603_105150778_105150864_105150912_105150990_105151105_105151282_105151397_105151625_105151740_105151937_105152058_105152160_105152292_105155561_105155623_105155737_105155990_105157705_105157764_105167756_105168108_105168354
WTC11_00026532	chr14	-	856	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	-2	0	1	multi-exon	FALSE	canonical	3	182	junction_1	5.30919014539883	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCTGCTGGTTCTGAG	-105180245	True	NA	-4	True	AATAAA	-19	NA	105181312	105172936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
WTC11_00026537	chr14	-	3579	14	FSM	ENSG00000185024.18	ENST00000392557.8	3579	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	17.8275765376874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-105247877	False	NA	-18	True	AGTAAA	-31	NA	105247894	105209285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105247070
WTC11_00026538	chr14	-	3671	18	FSM	ENSG00000185024.18	ENST00000547530.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	7.96358494153904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-105300803	True	NA	-18	True	AGTAAA	-31	NA	105301001	105209285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105286295_105286377_105300445
WTC11_00026542	chr14	-	1422	4	FSM	ENSG00000185024.18	ENST00000548421.2	1452	4	30	0	30	0	multi-exon	FALSE	canonical	3	46	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGGTATAGGAGAT	-105301213	False	NA	-3	True	ATTAAA	-18	NA	105301248	105256185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105256550_105272720_105272895_105286295_105286377_105300445
WTC11_00026543	chr14	-	572	3	FSM	ENSG00000251602.7	ENST00000661026.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGAACTGACTGCTGG	-105419066	False	NA	NA	False	NA	NA	NA	105419080	105418017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105418313_105418681_105418817_105418938
WTC11_00026544	chr14	-	337	2	FSM	ENSG00000251602.7	ENST00000504332.1	1447	2	659	451	0	-14	multi-exon	FALSE	canonical	1	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGTGGGAGTGGAGA	-105419066	False	NA	NA	False	NA	NA	NA	105419080	105418031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105418310_105419021
WTC11_00026545	chr14	-	451	1	FSM	ENSG00000225200.2	ENST00000392301.3	627	1	243	-67	243	67	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAACAGAGGCATC	NA	False	NA	NA	False	AATAAA	-37	NA	105978903	105978452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105978500_105978900
WTC11_00026546	chr14	+	3897	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAAATTTTCCTGTC	20478010	False	NA	-18	True	NA	NA	NA	20478029	20481926	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20478000_20481900
WTC11_00026547	chr14	+	372	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGGTGATTCAAAAAC	20625984	False	NA	NA	False	AGTAAA	-10	NA	20625994	20626366	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20626000_20626400
WTC11_00026548	chr14	+	297	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	20650471	20650768	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20650500_20650800
WTC11_00026550	chr14	+	779	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGGCTCGGGCAGCCT	23583525	False	NA	NA	False	NA	NA	NA	23583536	23584315	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_23583500_23584300
WTC11_00026551	chr14	+	299	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCACATCTTTCTTCC	24170787	False	NA	NA	False	NA	NA	NA	24171282	24171581	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_24171300_24171600
WTC11_00026552	chr14	+	343	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCCCAACAGATGTCT	NA	False	NA	NA	False	NA	NA	NA	25266311	25266654	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_25266300_25266700
WTC11_00026553	chr14	+	2196	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGGAAATGCCAAAC	NA	False	NA	NA	False	NA	NA	NA	30900006	30902202	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_30900000_30902200
WTC11_00026554	chr14	+	588	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATAATTTACATATAT	NA	False	NA	NA	False	TATAAA	-37	NA	32271017	32271605	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_32271000_32271600
WTC11_00026555	chr14	+	1332	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35715057	35716389	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_35715100_35716400
WTC11_00026556	chr14	+	237	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAACATTTTTATGAA	NA	False	NA	NA	False	NA	NA	NA	39216565	39216802	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_39216600_39216800
WTC11_00026557	chr14	+	6009	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAGAAAGTATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	41515942	41521951	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_41515900_41522000
WTC11_00026558	chr14	+	1444	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTGGTTGGATG	NA	False	NA	NA	False	NA	NA	NA	41639949	41641393	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_41639900_41641400
WTC11_00026559	chr14	+	274	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	43559449	43559723	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_43559400_43559700
WTC11_00026560	chr14	+	302	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTTGCACAGTCTCC	NA	False	NA	NA	False	NA	NA	NA	64331542	64331844	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_64331500_64331800
WTC11_00026561	chr14	+	352	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACTGTATCTCTCTG	71127694	False	NA	NA	False	NA	NA	NA	71127837	71128189	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_71127800_71128200
WTC11_00026562	chr14	+	280	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGATCATGTACCCCTT	73706106	False	NA	NA	False	NA	NA	NA	73706140	73706420	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_73706100_73706400
WTC11_00026563	chr14	+	212	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGATTTTTGGCAGTC	NA	False	NA	NA	False	NA	NA	NA	80823250	80823462	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_80823200_80823500
WTC11_00026564	chr14	+	301	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACAAACAGAAACT	NA	False	NA	NA	False	AAAAAG	-4	NA	82251908	82252209	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_82251900_82252200
WTC11_00026566	chr14	+	701	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTACAGCTATATCTCAT	98987266	False	NA	NA	False	ACTAAA	-25	NA	98987302	98988003	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_98987300_98988000
WTC11_00026568	chr14	+	216	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACATAATTCCTCAGTTT	98989220	False	NA	NA	False	NA	NA	NA	98989334	98989550	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_98989300_98989600
WTC11_00026569	chr14	+	302	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCTTTCTTTCACA	NA	False	NA	NA	False	NA	NA	NA	103860655	103860957	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_103860700_103861000
WTC11_00026572	chr14	+	1173	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	49	0	49	0	multi-exon	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	20684202	True	NA	15	True	AATAAA	-27	NA	20684225	20694186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20684759_20693546
WTC11_00026577	chr14	+	433	5	FSM	ENSG00000172590.18	ENST00000432849.7	411	5	-22	0	2	0	multi-exon	FALSE	canonical	3	63	junction_4	788.0439391303	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807208	True	NA	17	True	AATAAA	-25	NA	22829880	22834346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22833417_22833490_22834171
WTC11_00026578	chr14	+	930	3	FSM	ENSG00000172590.18	ENST00000557221.1	922	3	-8	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	930.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGAGACTCCGTCTCA	22807233	True	NA	NA	False	NA	NA	NA	22829905	22834828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22834171
WTC11_00026584	chr14	+	989	5	Fusion	ENSG00000187630.18_ENSG00000157326.19	novel	727	5	NA	NA	3	0	multi-exon	FALSE	canonical	3	48	junction_3	61.3529746630104	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951431	True	NA	NA	False	AATAAA	-26	NA	23953781	24006403	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24004336_24004393_24005885
WTC11_00026585	chr14	+	777	4	Fusion	ENSG00000187630.18_ENSG00000157326.19	novel	1340	4	NA	NA	103	0	multi-exon	FALSE	canonical	2	16	junction_2	85.2538692507397	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951541	True	NA	NA	False	AATAAA	-26	NA	23953891	24006403	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_+_23953917_23955034_23955213_24004336_24004393_24005885
WTC11_00026586	chr14	+	1413	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	-301	5	-301	0	multi-exon	FALSE	canonical	3	18	junction_2	78.0032050623563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	NA	False	NA	NA	False	AATAAA	-26	NA	23988516	24006403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
WTC11_00026587	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	59.2476642095342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23988584	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
WTC11_00026588	chr14	+	466	3	ISM	ENSG00000285467.1	ENST00000558293.7	1382	5	78803	192	78803	-192	3prime_fragment	FALSE	canonical	3	33	junction_2	4.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGACAGGCCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	24048733	24051185	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24048812_24049284_24049341_24050853
WTC11_00026591	chr14	+	2810	16	NIC	ENSG00000100897.18	novel	4304	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	108.148950783424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24110753	True	NA	16	True	AATAAA	-16	NA	24114776	24124029	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24114925_24115205_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
WTC11_00026592	chr14	+	747	2	FSM	ENSG00000259321.1	ENST00000558478.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCATGGTGGCGC	24139432	False	NA	NA	False	AATAAA	-32	NA	24139444	24140444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24139477_24139729
WTC11_00026594	chr14	+	1701	10	NIC	ENSG00000213928.9	novel	1626	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	6.56778520272518	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	24160821	True	NA	10	True	AATAAA	-19	NA	24161316	24166565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165056_24165184_24165846_24165963_24166121
WTC11_00026595	chr14	+	2147	20	NIC	ENSG00000100918.14	novel	2405	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.6350720472144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	24169465	True	NA	11	True	AAAACA	-17	NA	24172082	24180254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24172366_24172491_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
WTC11_00026596	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	107.895010697128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	24232229	False	NA	-25	True	AAAAAG	-22	NA	24232635	24239204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
WTC11_00026598	chr14	+	469	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	9	-196	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	4.02768199119819	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTAGGCTCAAGCGAT	24270491	True	NA	NA	False	NA	NA	NA	24271209	24298662	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
WTC11_00026606	chr14	+	2253	22	FSM	ENSG00000092108.22	ENST00000677690.1	3270	22	-18	1035	-13	307	multi-exon	FALSE	canonical	0	0	junction_2	150.253089584558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACGTAAAAGTTAGTGTT	30612482	True	NA	NA	False	CATAAA	-10	NA	30622277	30736157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30630476_30630566_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026607	chr14	+	3919	25	FSM	ENSG00000092108.22	ENST00000679096.1	3919	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	116.13024745948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30676856_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026609	chr14	+	4162	23	FSM	ENSG00000092108.22	ENST00000678858.1	4154	23	-8	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	103.833226103089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026610	chr14	+	2548	24	FSM	ENSG00000092108.22	ENST00000678124.1	4041	24	0	1493	0	351	multi-exon	FALSE	canonical	2	6	junction_1	115.44055500183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAGTACTGACAAGAAG	30612508	True	NA	NA	False	NA	NA	NA	30622303	30736201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622463_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026611	chr14	+	2599	25	FSM	ENSG00000092108.22	ENST00000676473.1	3589	25	-1	991	0	351	multi-exon	FALSE	canonical	2	6	junction_7	167.838939826913	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAGTACTGACAAGAAG	30612533	True	NA	NA	False	NA	NA	NA	30622328	30736201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30643879_30644019_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026612	chr14	+	1071	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2803	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	148.30764317726	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	30690329	True	NA	NA	False	AATAAA	-2	NA	30690383	30735799	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_30690578_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026613	chr14	+	974	6	FSM	ENSG00000092108.22	ENST00000556486.5	974	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	43.199074064151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAAGTTAGAA	30715285	False	NA	46	True	GATAAA	-4	NA	30715297	30735657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00026625	chr14	+	927	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	14.2672897060218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	38185376	True	NA	16	True	AATAAA	-24	NA	38190995	38202923	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
WTC11_00026626	chr14	+	4195	3	ISM	ENSG00000258649.2	ENST00000687886.1	939	4	13	4	13	-2	intron_retention	FALSE	canonical	3	50	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTAGACTCCTGCCTC	38185376	True	NA	14	True	AATAAA	-22	NA	38190995	38202921	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_38191232_38193240_38193324_38199045
WTC11_00026627	chr14	+	833	3	FSM	ENSG00000258649.2	ENST00000693073.1	856	3	14	9	14	-7	multi-exon	FALSE	canonical	3	30	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAACCTAGACTCCT	38185377	True	NA	9	True	AATAAA	-17	NA	38190996	38202916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_38191232_38199045_38199512_38202784
WTC11_00026628	chr14	+	14276	2	NNC	ENSG00000258649.2	novel	1017	4	NA	NA	14	4170	intron_retention	FALSE	canonical	1	1	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACATTCCACTTTAAAG	38185377	True	NA	NA	False	AATAAA	-17	NA	38190996	38207095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_38191232_38193054
WTC11_00026635	chr14	+	235	2	NNC	ENSG00000251363.3	novel	599	4	NA	NA	123688	-49	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAAATATAATGTTAGA	NA	False	NA	-50	True	NA	NA	NA	41078585	41149260	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_41078635_41149074
WTC11_00026636	chr14	+	278	1	FSM	ENSG00000259051.1	ENST00000554987.1	333	1	81	-26	81	26	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTACTCCAAAACCTT	NA	False	NA	NA	False	AATAAA	-11	NA	43300343	43300621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_43300300_43300600
WTC11_00026640	chr14	+	3310	16	NIC	ENSG00000185246.18	novel	3174	15	NA	NA	-20	0	intron_retention	TRUE	canonical	3	56	junction_3	109.14137620536	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATTGTTTATGAATTTA	45080349	True	NA	11	True	AATAAA	-16	NA	45084086	45115596	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45109893_45109994_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
WTC11_00026642	chr14	+	1848	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	31.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGCTCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	47104592	47108730	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47105544_47106733_47108307
WTC11_00026644	chr14	+	414	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-17826	25	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTCTCAAGAGATGAATA	NA	False	NA	35	True	AATAAA	-13	NA	49568753	49586903	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49568844_49586579
WTC11_00026646	chr14	+	2201	13	NNC	ENSG00000165516.11	novel	4969	13	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	189.886515816392	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCTTGGTGCTGAAGT	49765572	True	NA	23	True	AATAAA	-15	NA	49768166	49786381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49785579
WTC11_00026648	chr14	+	1231	3	FSM	ENSG00000125375.18	ENST00000426751.7	1231	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	50311106	True	NA	5	True	ATTAAA	-13	NA	50312323	50322892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50313061_50321482_50321595_50322510
WTC11_00026649	chr14	+	525	2	FSM	ENSG00000125375.18	ENST00000556962.1	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTGTATTGAATTTT	50322528	True	NA	NA	False	AATACA	-1	NA	50322541	50324291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50322720_50323944
WTC11_00026650	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.83292380386141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	50532963	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
WTC11_00026657	chr14	+	1090	5	NIC	ENSG00000131969.15	novel	850	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	122.054035164758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50893070	False	NA	21	True	AATAAA	-21	NA	50893581	50904970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_50893759_50901828_50901912_50903388_50903468_50904073_50904193_50904338
WTC11_00026658	chr14	+	570	5	FSM	ENSG00000258479.6	ENST00000556479.6	901	5	325	6	-148	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATCAGAGATGTTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	51333392	51365551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51333565_51348506_51348561_51349668_51349744_51350292_51350373_51365362
WTC11_00026660	chr14	+	3745	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	21	junction_1	33.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	NA	False	NA	7	True	AATAAA	-17	NA	51860397	51969794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51860791_51950649_51950766_51966558
WTC11_00026661	chr14	+	1050	5	FSM	ENSG00000100519.12	ENST00000554952.5	1037	5	-13	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_4	492.698944589899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTGCCTAAACCAGG	52693072	True	NA	NA	False	NA	NA	NA	52707188	52710335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52709574
WTC11_00026662	chr14	+	4568	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	-14	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	119.573691791276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	52722109	True	NA	4	True	ATTAAA	-11	NA	52730165	52774941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
WTC11_00026665	chr14	+	743	7	FSM	ENSG00000100526.21	ENST00000442975.6	727	7	-16	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	447.846699961791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTCGTTGTGTCTCT	54386033	True	NA	10	True	NA	NA	NA	54396978	54420212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399913_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
WTC11_00026666	chr14	+	762	7	NIC	ENSG00000100526.21	novel	938	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	420.430500267946	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386057	True	NA	16	True	NA	NA	NA	54397002	54420218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
WTC11_00026672	chr14	+	5749	3	NIC	ENSG00000168175.15	novel	6466	4	NA	NA	4	1	intron_retention	FALSE	canonical	3	30	junction_1	519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGGAAACTTTTTTTAA	55038212	True	NA	14	True	GATAAA	-22	NA	55051650	55069503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55051804_55062617_55063326_55064615
WTC11_00026694	chr14	+	1611	17	NIC	ENSG00000139974.16	novel	1730	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	32.7948166636132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTTTGTTGTG	60980271	True	NA	10	True	AATAAA	-21	NA	60981233	61083733	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083554
WTC11_00026699	chr14	+	8677	49	NIC	ENSG00000054654.20	novel	21822	116	NA	NA	43	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_6	61.0072535247973	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTACTGAATTCTG	64119455	True	NA	15	True	ATTAAA	-19	NA	64119472	64226434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64119610_64120926_64121062_64122011_64122134_64122285_64122428_64125078_64125211_64126326_64126480_64126597_64126808_64128451_64128554_64129781_64129902_64130047_64130249_64132264_64132439_64134068_64134201_64137786_64137984_64139940_64140074_64141340_64141524_64141941_64142089_64143771_64143949_64146067_64146224_64152563_64152717_64158624_64158796_64159311_64159443_64162071_64162277_64163401_64163582_64165284_64165411_64167232_64167388_64167494_64167640_64168876_64168972_64170227_64170463_64174943_64175139_64177357_64177484_64186423_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
WTC11_00026700	chr14	+	4096	19	ISM	ENSG00000054654.20	ENST00000394768.6	11095	63	110719	0	-10420	0	3prime_fragment	FALSE	canonical	3	94	junction_17	28.9823807693869	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	64185406	True	NA	11	True	ATTAAA	-15	NA	64186333	64226430	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
WTC11_00026716	chr14	+	1319	11	NIC	ENSG00000182185.19	novel	2596	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	17.1840041899436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACAGTGCTCTTCAAA	67818046	True	NA	NA	False	AATAAA	-16	NA	67819807	68683171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68682936
WTC11_00026727	chr14	+	1637	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	22	0	13	0	multi-exon	FALSE	canonical	3	23	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	70809278	True	NA	NA	False	AAAACA	-43	NA	70809912	70815994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70810666_70815110
WTC11_00026741	chr14	+	6494	13	NIC	ENSG00000119707.14	novel	3008	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_9	203.363163795435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGACTCATATTCTT	73096945	True	NA	14	True	ATTAAA	-16	NA	73097035	73121313	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_73097101_73099379_73099434_73099666_73099751_73100300_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111383_73111527_73111803_73112151_73112251_73114285_73114334_73119712
WTC11_00026743	chr14	+	9279	27	FSM	ENSG00000100767.17	ENST00000644200.2	5889	27	26	-3416	26	3399	multi-exon	FALSE	canonical	2	4	junction_19	6.33075053740581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	73237081	True	NA	NA	False	NA	NA	NA	73237531	73278039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73237593_73239772_73239833_73244643_73244760_73245635_73245697_73246072_73246176_73249983_73250115_73250906_73251031_73251485_73251567_73251663_73251837_73252017_73252142_73252648_73252776_73253753_73253962_73254512_73254696_73254876_73255019_73258978_73259060_73259268_73259546_73260708_73260830_73261155_73261295_73262349_73262828_73263644_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
WTC11_00026758	chr14	+	2737	8	NIC	ENSG00000119686.10	novel	669	7	NA	NA	-303	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	9.61716153126105	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCTGCCTTATCATT	75631375	False	NA	4	True	AATAAA	-12	NA	75631410	75648165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75631826_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
WTC11_00026764	chr14	+	4473	32	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	23.4998173438116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTTGCTTCCTCTT	75658882	True	NA	20	True	TATAAA	-17	NA	75661235	75954823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792912_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
WTC11_00026765	chr14	+	4343	31	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_30	27.5895310257754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTTGCTTCCTCTT	75658926	True	NA	20	True	TATAAA	-17	NA	75661279	75954823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75954423
WTC11_00026766	chr14	+	4653	32	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	28.2627039938635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTTGCTTCCTCTT	75658952	True	NA	20	True	TATAAA	-17	NA	75661305	75954823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661638_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792912_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
WTC11_00026768	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	105.817569546325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	75983087	True	NA	8	True	AATAAA	-17	NA	75985752	76083741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
WTC11_00026770	chr14	+	1252	9	NIC	ENSG00000119650.13	novel	816	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	43	junction_1	81.9320411987886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983129	True	NA	9	True	AATAAA	-18	NA	75985794	76083742	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
WTC11_00026779	chr14	+	1047	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	-101	-73	-77	0	multi-exon	FALSE	canonical	3	16	junction_1	45.2764749475207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	77320847	False	NA	-73	True	NA	NA	NA	77320918	77331393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
WTC11_00026785	chr14	+	889	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	-16	-144	0	144	multi-exon	FALSE	canonical	3	14792	junction_2	873.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGATGGGCGTGG	77571052	True	NA	NA	False	AATACA	-2	NA	77708102	77716495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771
WTC11_00026786	chr14	+	375	4	NNC	ENSG00000119705.10	novel	376	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	40	junction_1	6847.18999947343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	77571052	True	NA	25	True	AATAAA	-13	NA	77708102	77717593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_77708213_77710837_77710897_77715771_77715880_77717495
WTC11_00026787	chr14	+	482	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	-11	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	7260.90485063673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	77571052	True	NA	25	True	AATAAA	-13	NA	77708102	77717593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
WTC11_00026788	chr14	+	865	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	7414.92487412306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTGAGATATAAAATT	77571052	True	NA	NA	False	AATATA	-17	NA	77708102	77721107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
WTC11_00026800	chr14	+	2619	14	NIC	ENSG00000133943.21	novel	2814	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	26.7930928129846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113603	False	NA	23	True	AATAAA	-19	NA	91114097	91225355	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173404_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
WTC11_00026801	chr14	+	2549	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999639197258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113662	False	NA	23	True	AATAAA	-19	NA	91114448	91225355	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
WTC11_00026803	chr14	+	2435	13	FSM	ENSG00000133943.21	ENST00000523461.5	2435	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	30.9457410460452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACAACTCTTAAGTTT	NA	False	NA	-1	True	ACTAAA	-15	NA	91160340	91225331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91223678_91223796_91224683
WTC11_00026818	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	2	14	junction_3	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157132	True	NA	2	True	AATAAA	-15	NA	95157759	95179925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
WTC11_00026825	chr14	+	2411	12	FSM	ENSG00000100749.9	ENST00000681249.1	2411	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	297.481189071241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATGAAAATTATTAT	NA	False	NA	95	True	NA	NA	NA	96832508	96881468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876032_96876121_96881176
WTC11_00026828	chr14	+	2721	11	NIC	ENSG00000090061.17	novel	3524	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.10246875958186	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTCTTTGTTATGGG	99474741	True	NA	10	True	AATAAA	-16	NA	99481420	99511514	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206_99502377_99502718_99502985_99503610_99503645_99507075_99507148_99510156
WTC11_00026831	chr14	+	6094	7	NIC	ENSG00000214548.18	novel	1760	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	174	junction_3	448.881480274396	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATAAATGTGTTTCCTG	100825995	True	NA	NA	False	NA	NA	NA	100826117	100860994	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00026832	chr14	+	3238	6	NIC	ENSG00000214548.18	novel	1949	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_3	479.21752889476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTGTCTTAACAAAAACT	100825995	True	NA	NA	False	AATAAA	-6	NA	100826117	100861008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100831535_100836166_100836301_100845457_100845534_100860690
WTC11_00026840	chr14	+	2143	11	NIC	ENSG00000225746.13	novel	5163	37	NA	NA	12	70	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.6026078525099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAAGAAATCTGGCCCA	100949813	False	NA	NA	False	AATACA	-23	NA	100949833	100967123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100950473_100951431_100951495_100953963_100954047_100954921_100955007_100955884_100955950_100958261_100958344_100959801_100960220_100961026_100961133_100963964_100964001_100964352_100964440_100966644
WTC11_00026867	chr14	+	3089	18	FSM	ENSG00000075413.19	ENST00000677560.1	3068	18	-21	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	261.629905806765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAATTAAAAATTCACT	103378029	True	NA	-23	True	NA	NA	NA	103385389	103503797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103385698_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
WTC11_00026870	chr14	+	2315	15	NNC	ENSG00000126214.22	novel	2265	15	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_12	94.9290820151807	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATTAAAAGTT	103621167	True	NA	-12	True	NA	NA	NA	103629165	103701513	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679407_103679519_103700654_103700728_103701200
WTC11_00026871	chr14	+	3140	14	NIC	ENSG00000126214.22	novel	2322	14	NA	NA	0	-2	intron_retention	FALSE	canonical	2	61	junction_13	77.6809588055319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTCCGACTGACCTG	103621204	True	NA	1	True	NA	NA	NA	103629202	103686209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103684985
WTC11_00026873	chr14	+	2013	2	FSM	ENSG00000100711.14	ENST00000554757.1	2013	2	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACAAGGCCTCGCCTTC	103731419	False	NA	19	True	ATTAAA	-16	NA	103731430	103733663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103732763_103732982
WTC11_00026875	chr14	+	4850	22	FSM	ENSG00000203485.14	ENST00000330634.11	7578	22	-202	2930	-202	0	multi-exon	TRUE	canonical	1	1	junction_6	23.5545394039156	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGCGACTGTCGTG	104689393	False	NA	11	True	AATAAA	-13	NA	104689403	104719605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202_104714857_104718794
WTC11_00026877	chr14	+	4299	21	ISM	ENSG00000203485.14	ENST00000330634.11	7578	22	6	7211	6	0	5prime_fragment	FALSE	canonical	1	1	junction_6	23.5241896778614	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATCCAGTAAGGTAT	104686438	True	NA	11	True	AATAAA	-13	NA	104689611	104715324	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202
WTC11_00026895	chr14	-	2974	7	FSM	ENSG00000092094.11	ENST00000554249.5	987	7	-1987	0	-506	0	multi-exon	FALSE	canonical	3	196	junction_6	10.2089285540757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAAGCAAGGCTTGG	-20451372	False	NA	-82	True	NA	NA	NA	20451385	20447138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963
WTC11_00026896	chr14	-	914	2	FSM	ENSG00000129538.14	ENST00000397967.5	914	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGTGGCTTGAGAAAAT	-20802728	True	NA	NA	False	ATTAAA	-22	NA	20802844	20801227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20802094_20802796
WTC11_00026899	chr14	-	2152	17	NIC	ENSG00000165795.25	novel	2122	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	37.4023207000582	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTCTTTGTCTAGGT	-21024948	False	578	-8	True	AATAAA	-23	NA	21025526	21016765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
WTC11_00026900	chr14	-	2247	17	NNC	ENSG00000165795.25	novel	2079	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	38.5842726217561	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024939	False	578	-14	True	AATAAA	-17	NA	21025517	21016771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025283
WTC11_00026909	chr14	-	2914	8	FSM	ENSG00000129472.15	ENST00000397762.6	2914	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.03391773769796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-21474003	True	NA	-9	True	ATTAAA	-22	NA	21476959	21459019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
WTC11_00026910	chr14	-	1475	5	FSM	ENSG00000165819.12	ENST00000396522.6	2523	5	1061	-13	-52	0	multi-exon	FALSE	canonical	2	8	junction_3	201.556908837182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCATTCTGGCTCTGCT	-21494562	False	NA	-6	True	AATAAA	-26	NA	21503881	21498132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21503172_21503578_21503663
WTC11_00026915	chr14	-	341	3	FSM	ENSG00000100462.16	ENST00000557443.5	337	3	0	-4	0	0	multi-exon	FALSE	canonical	3	63	junction_1	444.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22922210	False	NA	-2	True	AATAAA	-24	NA	22922240	22920524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22920732_22920987_22921057_22922175
WTC11_00026921	chr14	-	3374	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	-14	0	14	multi-exon	FALSE	canonical	3	15	junction_6	17.4164673034842	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTTTTCAACTTTACGA	-23009721	True	NA	NA	False	NA	NA	NA	23010143	22985879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
WTC11_00026922	chr14	-	1980	7	FSM	ENSG00000100802.15	ENST00000397382.8	1986	7	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_6	22.0132535835422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTGCAGTCTGAGAAA	-23009738	True	NA	52	True	GGGGCT	-18	NA	23010160	22987128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23010016
WTC11_00026923	chr14	-	447	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	-3	0	3	multi-exon	FALSE	canonical	3	50	junction_1	1498.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGTTTGTTTAGA	-23034665	False	NA	0	True	AATAAA	-19	NA	23034727	23016539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23016636_23033367_23033675_23034683
WTC11_00026925	chr14	-	2464	13	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_12	171.31112047967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067786	True	NA	-3	True	AATAAA	-20	NA	23071518	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23071124_23071187_23071426
WTC11_00026926	chr14	-	2397	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_11	185.659556916363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067817	True	NA	-3	True	AATAAA	-20	NA	23071549	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23071426
WTC11_00026927	chr14	-	2441	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_11	162.926541273175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067825	True	NA	-3	True	AATAAA	-20	NA	23071557	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23071426
WTC11_00026928	chr14	-	2407	13	NNC	ENSG00000100813.15	novel	2563	13	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_12	159.259462478337	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067867	True	NA	-3	True	AATAAA	-20	NA	23071599	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071567
WTC11_00026929	chr14	-	4275	18	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_8	166.90970975672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23088929	True	NA	-3	True	AATAAA	-20	NA	23095107	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
WTC11_00026931	chr14	-	5759	20	NNC	ENSG00000100813.15	novel	4460	19	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	195.043584872715	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23088933	True	NA	-3	True	AATAAA	-20	NA	23095111	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23067341_23068702_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
WTC11_00026932	chr14	-	4444	19	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_15	175.960792841144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23088945	True	NA	-3	True	AATAAA	-20	NA	23095123	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
WTC11_00026937	chr14	-	2591	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_21	87.4608043082696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-23567475	False	3081	-14	True	AATAAA	-35	NA	23567494	23559564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
WTC11_00026940	chr14	-	1513	14	NIC	ENSG00000213983.12	novel	561	7	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_12	128.79211266232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTTTTATTATTACCTT	-23567474	False	3081	-17	True	ATTAAA	-14	NA	23567493	23563098	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23567110_23567316_23567450
WTC11_00026947	chr14	-	967	6	FSM	ENSG00000254505.11	ENST00000530996.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	268.22453280787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGAATCCTAGTGTCT	-24207722	True	NA	-43	True	AATAAA	-7	NA	24213489	24209623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211825_24213408
WTC11_00026948	chr14	-	1266	6	FSM	ENSG00000254505.11	ENST00000533523.6	1266	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	266.128089460696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTCTTTGATAGCAG	-24213801	False	NA	-94	True	NA	NA	NA	24213830	24209674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213408
WTC11_00026957	chr14	-	300	1	FSM	ENSG00000257179.1	ENST00000551091.1	273	1	138	-165	138	165	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTCACTAACAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	25267198	25266898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_25266900_25267200
WTC11_00026961	chr14	-	5107	22	ISM	ENSG00000092148.14	ENST00000611816.5	9322	43	72766	-6	1886	3	3prime_fragment	FALSE	canonical	3	33	junction_16	57.2900881044124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTCATGTGACTATT	-31134896	False	NA	0	True	ATTAAA	-18	NA	31134913	31100113	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871
WTC11_00026967	chr14	-	217	1	FSM	ENSG00000243824.1	ENST00000495231.1	498	1	9	272	9	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTGCCCTAATCATC	NA	False	NA	NA	False	NA	NA	NA	34740824	34740607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34740600_34740800
WTC11_00026973	chr14	-	7928	41	FSM	ENSG00000174373.17	ENST00000389698.7	7864	41	-69	5	0	0	multi-exon	TRUE	canonical	0	0	junction_25	10.2799562255877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGTGTTGATTTGT	-35807788	True	NA	-11	True	AATAAA	-20	NA	35809295	35538356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35539691_35548507_35548539_35549109_35549235_35570616_35570745_35572559_35572719_35595633_35595790_35605585_35605710_35625360_35625433_35627089_35627952_35634573_35634758_35635463_35635599_35651804_35651874_35654366_35654478_35655806_35655916_35659137_35659197_35664641_35664768_35671388_35671518_35672866_35673023_35674179_35674279_35674515_35674710_35677949_35678103_35683808_35683986_35684928_35685146_35686541_35686667_35689835_35690004_35721687_35721850_35723026_35723265_35725023_35725154_35728361_35728511_35738512_35738651_35742367_35742566_35748584_35748825_35750481_35750691_35752023_35752163_35756792_35756909_35760828_35761007_35762709_35762754_35770941_35771000_35775005_35775056_35775634_35775746_35808729
WTC11_00026979	chr14	-	357	3	FSM	ENSG00000258949.1	ENST00000555157.1	360	3	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTGTGTAAGAAACT	-44911847	False	NA	NA	False	AATAAA	-17	NA	44911860	44898907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44899077_44899229_44899314_44911756
WTC11_00026981	chr14	-	504	4	FSM	ENSG00000139915.21	ENST00000555521.1	644	4	14	126	14	-126	multi-exon	FALSE	canonical	3	12	junction_1	1.24721912892465	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGGGTATGACCTTTT	NA	False	NA	NA	False	AATACA	-35	NA	46920160	46874044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_46874201_46877488_46877510_46882043_46882222_46920011
WTC11_00026982	chr14	-	386	3	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	820.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTGGCTTGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	47108731	47104225	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104437_47104468_47104531_47108618
WTC11_00026984	chr14	-	3415	5	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2356	216	multi-exon	FALSE	canonical	3	81	junction_3	135.974951737443	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTATATGCAATACG	-48267808	False	NA	-17	True	AATAAA	-16	NA	48267965	48233526	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48260392_48262484_48265560_48265755_48267723
WTC11_00026985	chr14	-	5118	6	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2381	216	multi-exon	FALSE	canonical	3	81	junction_4	129.078890605707	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTATATGCAATACG	-48267833	False	NA	-17	True	AATAAA	-16	NA	48267990	48233526	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48258584_48260263_48260392_48262484_48265560_48265755_48267723
WTC11_00026989	chr14	-	555	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	10123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2929.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGCAATGTAAGGAGGGA	-49559862	True	NA	NA	False	NA	NA	NA	49620626	49608406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608444_49618687_49619141_49620561
WTC11_00026991	chr14	-	1666	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	126	0	-82	0	multi-exon	FALSE	canonical	1	2	junction_15	19.596624241458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	-49688285	False	NA	-43	True	AAGAAA	-43	NA	49688296	49643584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
WTC11_00026992	chr14	-	1581	17	FSM	ENSG00000100479.13	ENST00000554396.5	1581	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	10.8985019039316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTATTGTCGAAGT	-49687429	True	NA	39	True	AATATA	-6	NA	49688210	49650187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
WTC11_00026995	chr14	-	636	2	FSM	ENSG00000282885.2	ENST00000655317.1	1486	2	0	850	0	-423	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTGTCACGGATGTCA	-49862801	False	NA	NA	False	NA	NA	NA	49862864	49862025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49862317_49862519
WTC11_00026997	chr14	-	3460	12	ISM	ENSG00000100485.12	ENST00000216373.10	5508	23	0	38761	0	1	5prime_fragment	FALSE	canonical	3	27	junction_8	5.55662065088586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGCATTTGTACTT	-50231089	True	NA	NA	False	AATAAA	-21	NA	50231578	50155890	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50157122_50158564_50158647_50159430_50160087_50161481_50161610_50174453_50174553_50180571_50180683_50182462_50182607_50188496_50188701_50199690_50199856_50200952_50201085_50204283_50204410_50231196
WTC11_00027006	chr14	-	4870	22	FSM	ENSG00000087303.19	ENST00000216286.10	4870	22	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_10	7.02021699892661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGACTTAAGGATCTAT	-52068338	True	NA	-6	True	AATAAA	-15	NA	52069059	52004808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042351_52042781_52042932_52053578_52053939_52054019_52054322_52060123_52060357_52067857_52068164_52068766
WTC11_00027007	chr14	-	1964	13	FSM	ENSG00000087303.19	ENST00000556572.1	1964	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	7.69695105581136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCAGAACCTGGACCCT	NA	False	NA	NA	False	AAGAAA	-36	NA	52038952	52005454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52028721_52028851_52029546_52029691_52038746
WTC11_00027008	chr14	-	552	2	FSM	ENSG00000197930.13	ENST00000553714.1	672	2	120	0	120	0	multi-exon	FALSE	canonical	3	303	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGCATTTAATAGGAAA	-52646256	False	NA	53	True	AATAAA	-15	NA	52646290	52643215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52643631_52646153
WTC11_00027009	chr14	-	1967	14	NIC	ENSG00000197930.13	novel	5139	16	NA	NA	80	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	86.6606658520298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAAAAGTGAATGTTCT	-52695630	False	NA	-29	True	AATAAA	-23	NA	52695808	52643297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
WTC11_00027013	chr14	-	4107	7	NNC	ENSG00000197045.13	novel	4125	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	330.653771589962	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTTTTTTTACTCA	-54480317	True	NA	-15	True	AATAAA	-23	NA	54488994	54474479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_54478160_54479785_54479860_54480873_54480959_54481407_54481459_54482152_54482203_54483670_54483768_54488924
WTC11_00027017	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	35	junction_2	109.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804364_56805359
WTC11_00027029	chr14	-	3909	3	NNC	ENSG00000100625.9	novel	1573	3	NA	NA	-7	2981	intron_retention	FALSE	canonical	0	0	junction_1	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTGTGGCACTTATTT	-60724325	False	NA	45	True	ATTAAA	-20	NA	60724358	60716820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_60717146_60718008_60720446_60723211
WTC11_00027036	chr14	-	2139	6	FSM	ENSG00000125952.20	ENST00000618858.4	2141	6	0	2	0	1	multi-exon	FALSE	canonical	2	8	junction_2	137.418193846375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTGGTGTCTTCTTA	-65093191	True	NA	-2	True	AATAAA	-18	NA	65102544	65075125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077327_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
WTC11_00027048	chr14	-	3333	10	NNC	ENSG00000133961.21	novel	3604	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	103.070753596321	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452301	True	NA	-13	True	AATAAA	-15	NA	73458546	73275215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73277294_73282358_73282506_73284080_73284366_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
WTC11_00027049	chr14	-	2885	10	NIC	ENSG00000133961.21	novel	3037	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_6	87.5531584556237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-73452301	True	NA	1	True	AATAAA	-33	NA	73458546	73275672	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
WTC11_00027058	chr14	-	2872	18	NNC	ENSG00000119688.21	novel	1842	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_14	82.6665038879225	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATTGTATTTTCTCAC	-74297916	True	NA	NA	False	AATAAA	-16	NA	74302910	74285274	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295975_74296332_74296450_74297929_74298070_74300149_74300269_74302874
WTC11_00027068	chr14	-	607	5	FSM	ENSG00000198208.12	ENST00000553789.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	8.03118920210451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCACTGGGGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	74911341	74906880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74911247
WTC11_00027084	chr14	-	524	3	NNC	ENSG00000140022.14	novel	11084	9	NA	NA	21	-26136	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAGTGAGAGTGT	-81431246	True	NA	NA	False	NA	NA	NA	81436438	81424508	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_81424804_81427101_81427213_81436320
WTC11_00027087	chr14	-	8050	7	NNC	ENSG00000053254.16	novel	8021	6	NA	NA	-1321	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	63.2033754372871	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTGTTATGTGTGCTGC	-89417987	True	NA	-3	True	AATAAA	-36	NA	89418554	89156171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89416870_89417209_89418505
WTC11_00027091	chr14	-	1669	4	FSM	ENSG00000015133.20	ENST00000553403.1	1651	4	0	-18	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.8662192343351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGGAATGTGTACTTCT	-91414922	True	NA	NA	False	AATAAA	-16	NA	91417844	91378640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91379886_91408658_91408768_91416737_91416839_91417630
WTC11_00027092	chr14	-	2674	15	NIC	ENSG00000100796.18	novel	4416	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_14	157.366934394797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTTGACTCCCATT	-91506703	True	NA	NA	False	AATACA	-28	NA	91510300	91461380	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
WTC11_00027093	chr14	-	3320	14	ISM	ENSG00000100796.18	ENST00000554943.6	4416	15	-266	3873	-22	0	5prime_fragment	FALSE	canonical	3	254	junction_7	103.083581874472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTTGACTCCCATT	NA	False	NA	NA	False	AATACA	-28	NA	91510576	91461380	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
WTC11_00027100	chr14	-	3174	11	FSM	ENSG00000100605.17	ENST00000556603.6	3174	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	126.0499900833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCAGGTACGGGTG	-93115658	True	NA	-37	True	AATAAA	-37	NA	93115871	92939752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115185_93115771
WTC11_00027102	chr14	-	3202	10	NIC	ENSG00000100605.17	novel	6188	11	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_8	152.094837210777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACGTGTTTACACAT	-93115699	True	NA	-23	True	AATAAA	-20	NA	93115912	92939861	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93115068_93115306_93115771
WTC11_00027135	chr14	+	498	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAACAACAAAAAAATTGAT	NA	False	NA	NA	False	NA	NA	NA	32268149	32268647	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_32268100_32268600
WTC11_00027136	chr14	+	224	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGGGTGGTTCATTTTC	NA	False	NA	NA	False	AATATA	-24	NA	39216644	39216868	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_39216600_39216900
WTC11_00027143	chr14	+	469	3	FSM	ENSG00000258604.1	ENST00000532213.2	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATGTTGTCCACA	21024273	False	NA	NA	False	NA	NA	NA	21024295	21029271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21024345_21028445_21028535_21028940
WTC11_00027144	chr14	+	4619	10	FSM	ENSG00000092203.15	ENST00000613569.4	4711	10	92	0	92	0	multi-exon	FALSE	canonical	0	0	junction_1	148.846760208919	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCAATTCTAGCCCTTT	21476787	False	NA	22	True	AATAAA	-27	NA	21476846	21499175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21476874_21477121_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
WTC11_00027146	chr14	+	315	2	FSM	ENSG00000157227.14	ENST00000547596.1	575	2	0	260	0	-260	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCCCAGTGCCAGAGAG	22841600	False	NA	NA	False	NA	NA	NA	22841620	22842208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22841640_22841912
WTC11_00027147	chr14	+	560	2	FSM	ENSG00000288795.1	ENST00000687133.1	718	2	-123	281	-123	-281	multi-exon	FALSE	canonical	3	7	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGGTTGGTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	23057578	23058380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23058043_23058284
WTC11_00027148	chr14	+	3557	4	FSM	ENSG00000129473.11	ENST00000679000.1	3539	4	-18	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.2836838484589	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTAATGAGAAGGAC	23305247	True	NA	-5	True	AATAAA	-9	NA	23306832	23311735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306942_23307191_23307280_23307759_23308200_23308815
WTC11_00027149	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1514.88870959854	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	23305247	True	NA	20	True	AATAAA	-33	NA	23306832	23326175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
WTC11_00027151	chr14	+	1007	6	FSM	ENSG00000187630.18	ENST00000560276.1	413	6	-139	-455	-139	0	multi-exon	FALSE	canonical	3	38	junction_1	61.2385499501744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23994613	False	NA	NA	False	AATAAA	-26	NA	23994957	24006403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
WTC11_00027154	chr14	+	744	1	FSM	ENSG00000276698.1	ENST00000610486.1	658	1	-104	18	-104	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGCCTGTGGCATAATC	24198172	False	NA	-2	True	AATAAA	-12	NA	24198328	24199072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24198300_24199100
WTC11_00027157	chr14	+	1641	10	NNC	ENSG00000100938.19	novel	1595	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_9	108.40094756089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGCTGGGGCTTTC	24230713	True	NA	10	True	AATAAA	-20	NA	24232895	24239239	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238572
WTC11_00027159	chr14	+	14516	11	Fusion	ENSG00000196943.14_ENSG00000213906.10_ENSG00000213903.9	novel	6045	10	NA	NA	-6	-19	intron_retention	FALSE	canonical	3	9	junction_10	16.2037032804233	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGACATTTCCCTGGAG	24296972	True	NA	-7	True	AATAAA	-4	NA	24299872	24318017	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937_24310256_24310654
WTC11_00027163	chr14	+	1508	1	FSM	ENSG00000197358.9	ENST00000550043.1	1585	1	99	-22	-65	22	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGAACACGAACATGCA	NA	False	NA	NA	False	AATAAA	-41	NA	28264488	28265996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_28264500_28266000
WTC11_00027167	chr14	+	4171	24	FSM	ENSG00000092108.22	ENST00000678802.1	4171	24	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	56.5581153847882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATTTCAGAAATAAAA	30612508	True	NA	NA	False	ATTAAA	-2	NA	30622303	30735779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00027169	chr14	+	885	4	FSM	ENSG00000092108.22	ENST00000556256.1	428	4	-415	-42	-415	0	multi-exon	FALSE	canonical	3	491	junction_1	53.8970211504206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCCTAACAGTGAAAATC	NA	False	NA	93	True	AAAAAG	-42	NA	30721286	30735704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30721918_30722493_30722560_30734789_30734859_30735585
WTC11_00027170	chr14	+	680	7	ISM	ENSG00000151413.17	ENST00000547839.5	2001	10	51	33469	9	-23291	5prime_fragment	FALSE	canonical	0	0	junction_6	33.900180268285	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGTACAGAAGTCTTTA	31560499	True	NA	NA	False	AATACA	-18	NA	31561448	31826804	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31826628
WTC11_00027171	chr14	+	5901	6	FSM	ENSG00000100852.14	ENST00000433497.5	3047	6	-143	-2711	92	62	multi-exon	FALSE	canonical	3	4	junction_1	54.8160560420029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTGGGATTGTTTA	32074655	False	NA	75	True	AGTAAA	-29	NA	32077165	32159790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077436_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
WTC11_00027172	chr14	+	863	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	-196	4	-196	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTGTGTAAATGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	34540847	34541710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34540800_34541700
WTC11_00027173	chr14	+	360	1	FSM	ENSG00000226677.3	ENST00000554337.1	1009	1	324	325	324	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTCGCCAGGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	34939647	34940007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34939600_34940000
WTC11_00027175	chr14	+	1821	1	FSM	ENSG00000279434.1	ENST00000624600.1	2025	1	575	-371	575	371	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGCTTTCTACGTA	NA	False	NA	NA	False	NA	NA	NA	35086609	35088430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35086600_35088400
WTC11_00027178	chr14	+	341	1	FSM	ENSG00000257307.1	ENST00000550416.1	709	1	85	283	85	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGAGACTAGTCAACCT	NA	False	NA	NA	False	NA	NA	NA	35881085	35881426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35881100_35881400
WTC11_00027179	chr14	+	352	1	FSM	ENSG00000188831.4	ENST00000553589.1	478	1	314	-188	314	188	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAATAACTTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	36371725	36372077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_36371700_36372100
WTC11_00027180	chr14	+	535	3	FSM	ENSG00000139865.16	ENST00000554555.1	535	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37796293	37802390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37796371_37796786_37796948_37802093
WTC11_00027181	chr14	+	10900	2	ISM	ENSG00000258649.2	ENST00000687886.1	939	4	-345	-621	-345	621	intron_retention	FALSE	canonical	3	60	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGTTCTCAAAAAAAAAAAA	38190621	False	NA	NA	False	NA	NA	NA	38190637	38203546	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_38191232_38193240
WTC11_00027183	chr14	+	1759	4	NNC	ENSG00000258649.2	novel	939	4	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.694789787469	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTAGACTCCTGCCTC	38185375	True	NA	14	True	AATAAA	-22	NA	38190994	38202921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_38191232_38196071_38196991_38199045_38199512_38202784
WTC11_00027187	chr14	+	2865	24	NNC	ENSG00000150527.18	novel	3441	23	NA	NA	-402	0	intron_retention	FALSE	canonical	1	1	junction_1	29.7611156975245	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTATGAGTAAATTATT	39266645	False	NA	NA	False	AATAAA	-16	NA	39266683	39350421	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_39267040_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
WTC11_00027189	chr14	+	655	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-142	-42864	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	67.0721005088305	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACTGTGCTTCTCAATG	40954167	True	NA	NA	False	AGTAAA	-22	NA	40954550	41106445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41106296
WTC11_00027190	chr14	+	3224	4	ISM	ENSG00000179476.8	ENST00000325192.8	2935	5	2569	8	-570	-7	3prime_fragment	FALSE	canonical	3	61	junction_3	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGGCAAGGCTCCC	44899178	False	NA	9	True	AATAAA	-22	NA	44899843	44907249	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_44900960_44903206_44903297_44904394_44904530_44905366
WTC11_00027194	chr14	+	1780	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	35	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGCTCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	47104592	47108730	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47106444_47106733_47107475
WTC11_00027195	chr14	+	1851	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	71	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGCTCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	47104592	47108730	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47105544_47106733_47108304
WTC11_00027196	chr14	+	890	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	66.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTTTGGTGCTCTCT	47104640	False	NA	NA	False	AATAAA	-20	NA	47104650	47108727	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47106444_47106733_47108304
WTC11_00027197	chr14	+	2102	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	47106616	False	NA	NA	False	AATAAA	-22	NA	47106627	47108729	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_47106600_47108700
WTC11_00027198	chr14	+	312	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	12	-25	12	25	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTCTCAAGAGATGAATA	49576225	True	NA	35	True	AATAAA	-13	NA	49586591	49586903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49586600_49586900
WTC11_00027199	chr14	+	1552	5	NIC	ENSG00000165501.17	novel	1886	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	150.602747318899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	49592072	True	NA	8	True	ATTAAA	-15	NA	49598954	49614670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_49599204_49602369_49602469_49603551_49603619_49607399_49608122_49614255
WTC11_00027200	chr14	+	335	1	FSM	ENSG00000259155.2	ENST00000554632.2	525	1	147	43	147	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGCCCCCAGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	49677515	49677850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49677500_49677800
WTC11_00027201	chr14	+	650	4	ISM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	5011	0	54	5prime_fragment	FALSE	canonical	3	45	junction_1	76.4373381709925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTATTGACTTAAAA	50311106	True	NA	59	True	NA	NA	NA	50312323	50322946	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510
WTC11_00027202	chr14	+	719	5	FSM	ENSG00000125375.18	ENST00000555939.6	719	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	79.2022726946645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTAATTCTAAAATTTG	50311106	True	NA	NA	False	AAAACA	-18	NA	50312323	50324706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50324546
WTC11_00027205	chr14	+	3331	1	Genic_Genomic	ENSG00000131969.15	novel	NA	NA	NA	NA	-66	3277	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	50893004	False	NA	33	True	AATAAA	-24	NA	50893515	50896846	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_50893500_50896800
WTC11_00027206	chr14	+	3119	5	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-65	0	intron_retention	FALSE	canonical	3	256	junction_1	30.0124973969178	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50893005	False	NA	21	True	AATAAA	-21	NA	50893516	50904970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
WTC11_00027208	chr14	+	3399	3	FSM	ENSG00000186469.9	ENST00000556752.2	3424	3	25	0	-17	0	multi-exon	FALSE	canonical	3	75	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCAATTTCATTGT	NA	False	NA	13	True	AATAAA	-23	NA	51877616	51969800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51877658_51950649_51950766_51966558
WTC11_00027209	chr14	+	578	5	FSM	ENSG00000087302.9	ENST00000557553.5	557	5	-21	0	-21	0	multi-exon	FALSE	canonical	0	0	junction_2	1013.59123294354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTCTATAAATCCTA	51989480	False	NA	NA	False	NA	NA	NA	51989492	52001866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51989701_51991316_51991442_51998493_51998581_51999707_51999797_52001797
WTC11_00027211	chr14	+	360	4	FSM	ENSG00000100519.12	ENST00000555887.5	573	4	11	202	-3	54	multi-exon	FALSE	canonical	3	1048	junction_3	90.5550783900175	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGCAAGCAGGTGGAGC	52693072	True	NA	NA	False	NA	NA	NA	52707188	52708887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763
WTC11_00027212	chr14	+	1321	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	10	102	10	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATGCAGCTATAAAAT	52951310	True	NA	NA	False	AATAAA	-38	NA	52951441	52952762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52951400_52952800
WTC11_00027213	chr14	+	672	5	FSM	ENSG00000100532.13	ENST00000557317.1	668	5	-4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	105.252969079262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCGCTATTGACCTTAG	54508486	True	NA	NA	False	ACTAAA	-42	NA	54509901	54530998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54523149_54523246_54530048_54530227_54530902
WTC11_00027214	chr14	+	6967	3	NNC	ENSG00000180008.9	novel	6779	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	31	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	55024195	True	NA	14	True	ATTAAA	-21	NA	55027229	55049488	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_55027472_55031803_55031992_55042951
WTC11_00027215	chr14	+	5666	5	NNC	ENSG00000168175.15	novel	2836	5	NA	NA	-3	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	411.910487848999	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATTTTTCATGTTAT	55038205	True	NA	53	True	TTTAAA	-19	NA	55051643	55069542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615_55066914_55067064
WTC11_00027216	chr14	+	3454	6	FSM	ENSG00000131981.16	ENST00000554715.1	916	6	-11	-2527	-3	825	multi-exon	FALSE	canonical	1	1	junction_5	25.4950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCCCAAAATATTATTT	55128415	True	NA	NA	False	NA	NA	NA	55129248	55146248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55143447
WTC11_00027221	chr14	+	2977	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	0	-5	intron_retention	FALSE	canonical	3	26	junction_2	82.3994749339324	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTATATCTTGGGTTC	57265460	True	NA	NA	False	ATTAAA	-14	NA	57268923	57290069	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
WTC11_00027224	chr14	+	4795	32	NIC	ENSG00000100578.18	novel	8558	31	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	23.5379561519834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGTCTGATTGTGAGT	58426183	True	NA	NA	False	AATAAA	-15	NA	58427744	58548119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_58427814_58429362_58429434_58430647_58430718_58432387_58432458_58440069_58440161_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
WTC11_00027225	chr14	+	2481	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	43	0	-6	0	multi-exon	FALSE	canonical	2	9	junction_2	287.754288607911	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	59478000	True	NA	68	True	ATTAAA	-15	NA	59484485	59505404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
WTC11_00027233	chr14	+	4160	20	NIC	ENSG00000054654.20	novel	21842	116	NA	NA	-10413	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	48.599670552786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	64185413	True	NA	13	True	ATTAAA	-17	NA	64186340	64226432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64215285_64215355_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
WTC11_00027234	chr14	+	3312	27	NIC	ENSG00000100714.17	novel	3154	28	NA	NA	122	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	304.974470267255	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	64388128	False	NA	9	True	AATAAA	-38	NA	64388152	64460025	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
WTC11_00027243	chr14	+	476	4	FSM	ENSG00000081181.8	ENST00000557319.1	627	4	151	0	151	0	multi-exon	FALSE	canonical	3	375	junction_1	58.1740682969845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTTCAAGCTTTGGTC	67646588	False	NA	NA	False	NA	NA	NA	67646598	67650808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67646739_67646920_67647026_67648046_67648184_67650714
WTC11_00027248	chr14	+	3522	11	NIC	ENSG00000081177.19	novel	2688	10	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	69.2260066737928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	69191111	False	NA	17	True	AATAAA	-18	NA	69191862	69242358	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_69192040_69203916_69204001_69209423_69209804_69210111_69210202_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
WTC11_00027255	chr14	+	8686	24	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	-25	0	intron_retention	FALSE	canonical	3	61	junction_2	60.5618307989153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	71317081	True	NA	6	True	AATAAA	-18	NA	71320423	71741209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_71321182_71413947_71414015_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738243_71738326_71739017
WTC11_00027258	chr14	+	9719	19	NIC	ENSG00000119707.14	novel	6813	19	NA	NA	0	28	intron_retention	FALSE	canonical	3	86	junction_9	147.87870404866	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAGACAGCATCTTGA	73050994	True	NA	56	True	ATTAAA	-34	NA	73058546	73123927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
WTC11_00027265	chr14	+	1222	4	NNC	ENSG00000140043.12	novel	2765	10	NA	NA	3	1838	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	86.3017960415657	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGAGTTCTGTTTTATC	73848824	True	NA	10	True	AATAAA	-23	NA	73851833	73863564	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_73851944_73858815_73858900_73860538_73860658_73862655
WTC11_00027280	chr14	+	3082	17	FSM	ENSG00000119685.20	ENST00000556893.5	3071	17	-11	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	48.9134679178445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTTTAACATATGAGT	75745107	True	NA	NA	False	AATAAA	-21	NA	75745118	75887307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75745209_75745489_75745582_75752892_75752956_75757830_75757870_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75886699
WTC11_00027284	chr14	+	1131	9	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	30	-1650	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	55.9105032619096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTTTTCTAGGGTA	76146237	True	NA	-5	True	AATAAA	-8	NA	76151964	76200357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_76151992_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
WTC11_00027285	chr14	+	1776	9	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	0	-1650	intron_retention	FALSE	canonical	3	16	junction_8	42.9358169248007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTTTTCTAGGGTA	76154328	False	NA	-5	True	AATAAA	-8	NA	76154353	76200357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
WTC11_00027286	chr14	+	1422	9	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	6	-2478	intron_retention	FALSE	canonical	2	9	junction_8	45.0964244702393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGGATTGTATTCCTG	76154334	False	NA	4	True	ATTAAA	-13	NA	76154359	76199529	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199399
WTC11_00027292	chr14	+	804	6	FSM	ENSG00000042317.17	ENST00000557248.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	16.9776323437634	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAATCTTTCCTGTCAC	88384962	True	NA	NA	False	TTTAAA	-7	NA	88385738	88426602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396185_88416710_88416845_88426231
WTC11_00027294	chr14	+	1921	13	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	105	junction_8	155.950312599879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATCTGAAGTGTCTAA	88563456	True	NA	28	True	AATATA	-30	NA	88563567	88611882	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
WTC11_00027302	chr14	+	2629	12	NIC	ENSG00000066455.13	novel	2879	13	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_11	59.5106768669037	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGTGACAAAAATAAAAAGT	92790580	True	NA	-18	True	NA	NA	NA	92794339	92839796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92839365
WTC11_00027303	chr14	+	373	3	ISM	ENSG00000100604.13	ENST00000553866.1	889	6	-201	4684	5	-5	5prime_fragment	FALSE	canonical	1	1	junction_1	61.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAAGGAGCTCCAAGA	NA	False	NA	NA	False	NA	NA	NA	92923161	92927584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_92923406_92926604_92926699_92927549
WTC11_00027315	chr14	+	1737	14	FSM	ENSG00000100749.9	ENST00000681355.1	1719	14	-18	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	395.326903899476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAGAGTGGATAAAAAT	96789161	True	NA	-81	True	NA	NA	NA	96797394	96881516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96832430_96832611_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
WTC11_00027325	chr14	+	1760	9	FSM	ENSG00000214548.18	ENST00000519709.6	1760	9	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_5	568.827027750968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836041_100836076_100836166_100836301_100845457_100845534_100860690
WTC11_00027326	chr14	+	1509	6	NIC	ENSG00000214548.18	novel	1643	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_3	525.475632165755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_100826218_100828707_100828817_100829033_100829788_100836166_100836301_100845457_100845534_100860690
WTC11_00027331	chr14	+	1065	4	ISM	ENSG00000214548.18	ENST00000556736.5	1689	8	5994	-15	56	0	3prime_fragment	FALSE	canonical	3	117	junction_1	633.767044478227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100832101	False	NA	NA	False	AATAAA	-21	NA	100832119	100861023	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_100832642_100836166_100836301_100845457_100845534_100860690
WTC11_00027343	chr14	+	14201	78	FSM	ENSG00000197102.14	ENST00000680423.1	14201	78	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_40	196.391306543551	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGAGGAAATAAAACACTA	101945697	True	NA	-14	True	NA	NA	NA	101964572	102050765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382_102017505_102018511_102018617_102019892_102020057_102022750_102022881_102026573_102026708_102027173_102027289_102027382_102027545_102027618_102027834_102027936_102028142_102029538_102029713_102029818_102029939_102030161_102030283_102032271_102032468_102033064_102033183_102033268_102033485_102033975_102034189_102034324_102034453_102036488_102036643_102038459_102038607_102038697_102038849_102039000_102039255_102039411_102039547_102039637_102039733_102040235_102040411_102040597_102040674_102041573_102041735_102042012_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070_102050199_102050434
WTC11_00027347	chr14	+	2090	3	NIC	ENSG00000140153.18	novel	2175	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGTTTGTAGCAC	102137015	False	NA	12	True	AATAAA	-12	NA	102139925	102210521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_102140173_102194937_102195121_102208861
WTC11_00027358	chr14	+	3435	17	NNC	ENSG00000075413.19	novel	3481	18	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	217.857177985946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	103378063	True	NA	11	True	ATTAAA	-23	NA	103385423	103503831	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103455318_103455352_103457139_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
WTC11_00027361	chr14	+	2615	15	NIC	ENSG00000126214.22	novel	2322	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	24	junction_12	112.068127967422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTCCGACTGACCTGT	103621204	True	NA	2	True	NA	NA	NA	103629202	103686210	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103684985_103685037_103685637
WTC11_00027367	chr14	+	2817	9	NNC	ENSG00000179364.15	novel	3274	23	NA	NA	-33	2395	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	96.2580353788711	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATTTTTAACACAATA	105311322	True	NA	-29	True	GATAAA	-19	NA	105314714	105372553	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105370741
WTC11_00027368	chr14	+	2902	23	FSM	ENSG00000179364.15	ENST00000685365.1	3274	23	-165	537	-33	0	multi-exon	FALSE	canonical	3	6	junction_18	63.352173868655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTACTACAGAGACAGAC	105311322	True	NA	NA	False	NA	NA	NA	105314714	105394743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
WTC11_00027370	chr14	+	1927	12	NIC	ENSG00000179364.15	novel	6361	25	NA	NA	58	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	82.7186808725167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTTGCTCTTCTGAAG	105381970	False	NA	36	True	AATACA	-20	NA	105381981	105395253	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_105382059_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
WTC11_00027375	chr14	+	1757	9	NIC	ENSG00000185347.18	novel	1920	9	NA	NA	17	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	31.1448230047949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGGCCCTCCCCC	105490617	True	NA	14	True	AATAAA	-14	NA	105491342	105499223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_105491523_105491621_105491701_105492147_105492310_105492578_105492735_105493834_105493934_105495879_105496087_105497356_105497444_105497797_105497978_105498616
WTC11_00027377	chr14	-	1588	7	NNC	ENSG00000100814.18	novel	1470	7	NA	NA	-9441	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	155.03915276113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	-20337566	False	24	-10	True	AATAAA	-20	NA	20342753	20311369	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20342609
WTC11_00027378	chr14	-	545	1	FSM	ENSG00000259001.3	ENST00000554988.1	638	1	15	78	15	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACCCCGCAGGGGACCT	NA	False	NA	NA	False	NA	NA	NA	20343670	20343125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20343100_20343700
WTC11_00027379	chr14	-	1053	1	ISM	ENSG00000129566.13	ENST00000553365.5	2967	9	6381	0	6361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGCTTTTTAATTT	NA	False	NA	-5	True	AATAAA	-15	NA	20366719	20365666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_20365700_20366700
WTC11_00027380	chr14	-	7004	48	ISM	ENSG00000129566.13	ENST00000556935.5	7643	53	11886	-390	2323	-373	3prime_fragment	TRUE	canonical	1	2	junction_44	4.03425800663535	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGGGAGAATAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	20401534	20368003	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_20368560_20368797_20368903_20369343_20369577_20369673_20369780_20371217_20371315_20371488_20371633_20372732_20372858_20373010_20373148_20373269_20373403_20373506_20373584_20373677_20373811_20374428_20374537_20375754_20375869_20376103_20376265_20377279_20377493_20377599_20377754_20378023_20378237_20378379_20378536_20378753_20378854_20378980_20379106_20379929_20380054_20380234_20380476_20380930_20381046_20381312_20381402_20381552_20381687_20381912_20382064_20382223_20382357_20382622_20382716_20383173_20383354_20383487_20383645_20383742_20383919_20384037_20384233_20384390_20384509_20384599_20384714_20384984_20385110_20386074_20386196_20386446_20386624_20387904_20388064_20389237_20389298_20389609_20389741_20390680_20390759_20390937_20391097_20391598_20391768_20395449_20395628_20395858_20395950_20396620_20396731_20400983_20401142_20401456
WTC11_00027381	chr14	-	1313	11	NNC	ENSG00000092094.11	novel	1976	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	60.8694504657303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTTGGTGATTGGA	-20454773	False	3755	-6	True	AATAAA	-20	NA	20454807	20447062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454564
WTC11_00027382	chr14	-	1293	11	NIC	ENSG00000092094.11	novel	1976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	59.1152264649303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTTGGTGATTGGA	-20454778	False	3755	-6	True	AATAAA	-20	NA	20454812	20447062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451994_20452150_20452328_20452449_20454568
WTC11_00027384	chr14	-	904	3	FSM	ENSG00000129538.14	ENST00000340900.3	878	3	-26	0	-26	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCTAGGTACTGTT	-20802765	True	NA	11	True	AATAAA	-31	NA	20802881	20801345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20802094_20802248_20802320_20802796
WTC11_00027385	chr14	-	1987	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	-7	0	-2	multi-exon	FALSE	canonical	3	17	junction_14	42.857202380911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTCTTTGTCTAGGT	-21024527	False	43	-8	True	AATAAA	-23	NA	21025105	21016765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
WTC11_00027386	chr14	-	2150	18	NIC	ENSG00000165795.25	novel	2122	17	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	52.1210329533536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTCTTTGTCTAGGT	-21024909	False	578	-8	True	AATAAA	-23	NA	21025487	21016765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018626_21018664_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
WTC11_00027390	chr14	-	3145	10	NNC	ENSG00000092199.19	novel	1924	10	NA	NA	0	69822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2428.51659238848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAATAAGCATATATTA	-21168390	True	NA	NA	False	AAAAAG	-2	NA	21269389	21139313	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21139351_21209150_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
WTC11_00027391	chr14	-	4426	27	NNC	ENSG00000092201.10	novel	4433	26	NA	NA	0	56646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.655102475174	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGAGAACTCTAAGTAC	-21347402	True	NA	NA	False	NA	NA	NA	21383981	21294829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21294861_21351475_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
WTC11_00027392	chr14	-	582	6	FSM	ENSG00000092201.10	ENST00000556309.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	676.518558503756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGCAAACTGGCTGAG	-21347367	True	NA	NA	False	NA	NA	NA	21383946	21369348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21369356_21369749_21369897_21370335_21370489_21371873_21371971_21373337_21373431_21383861
WTC11_00027393	chr14	-	8432	38	FSM	ENSG00000100888.15	ENST00000557364.6	8163	38	31	-300	0	0	multi-exon	FALSE	canonical	2	7	junction_37	27.728017438309	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTTTGTTCTATGTT	-21436046	True	NA	-25	True	AATAAA	-21	NA	21437245	21385193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21437193
WTC11_00027396	chr14	-	3571	15	FSM	ENSG00000100888.15	ENST00000645140.1	3613	15	0	42	0	-42	multi-exon	FALSE	canonical	3	39	junction_7	9.10623244749194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTCTCCAAATAAAGTAAA	-21431540	False	NA	NA	False	NA	NA	NA	21431555	21404856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800
WTC11_00027398	chr14	-	1895	11	NNC	ENSG00000165819.12	novel	1980	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_9	144.441302957291	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21501940	True	NA	-11	True	AATAAA	-21	NA	21511259	21498137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503574_21503663_21503882_21511123
WTC11_00027401	chr14	-	649	4	NNC	ENSG00000129562.11	novel	684	3	NA	NA	0	16260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	919.777630130723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCAAATTAGGTGTCC	-22568670	True	NA	NA	False	NA	NA	NA	22589157	22548646	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_22548677_22564904_22565138_22575058_22575234_22588946
WTC11_00027404	chr14	-	1635	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	-9	0	0	multi-exon	FALSE	canonical	3	41	junction_8	88.1616944880258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-22953255	True	NA	-57	True	NA	NA	NA	22957137	22946260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
WTC11_00027406	chr14	-	423	4	FSM	ENSG00000100802.15	ENST00000554179.5	441	4	18	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCCAGTGGCAGCGAG	-23009711	True	NA	NA	False	NA	NA	NA	23010133	22998995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22999157_23000958_23001038_23005064_23005131_23010016
WTC11_00027407	chr14	-	3974	11	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	409	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	153.346666087007	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23065384	False	NA	-3	True	AATAAA	-20	NA	23069116	23058563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23067313
WTC11_00027409	chr14	-	4247	12	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	0	42857	intron_retention	FALSE	non_canonical	0	0	junction_1	1190.09620418125	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAGCTCTAATACATAA	-23142238	True	NA	NA	False	NA	NA	NA	23183650	23082437	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23082464_23125299_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
WTC11_00027411	chr14	-	2445	20	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	94.8771183691184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23567313	False	NA	-16	True	AATAAA	-33	NA	23567324	23559566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
WTC11_00027412	chr14	-	2457	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_19	112.51688762137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23564698	True	NA	-16	True	AATAAA	-33	NA	23567779	23559566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23567110_23567316_23567738
WTC11_00027413	chr14	-	2628	23	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_8	96.752090117727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	-23564698	True	NA	-57	True	NA	NA	NA	23567779	23559607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563199_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
WTC11_00027416	chr14	-	5375	33	NIC	ENSG00000259522.3	novel	4351	31	NA	NA	-2656	176	combination_of_known_splicesites	FALSE	canonical	3	158	junction_31	69.5685082760152	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24190643	False	NA	-14	True	AATAAA	-28	NA	24193072	24180218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718_24189809_24190379_24190654_24192170_24192357_24192647
WTC11_00027419	chr14	-	2032	1	FSM	ENSG00000278784.1	ENST00000619226.1	1200	1	-851	19	-851	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTTCTTATAAATTAC	-24197895	False	NA	NA	False	ATTAAA	-1	NA	24203662	24201630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24201600_24203700
WTC11_00027420	chr14	-	847	6	FSM	ENSG00000254505.11	ENST00000542700.6	847	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	328.016706891585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAGCCCTGGCTCAA	-24213056	False	5767	NA	False	AAAAAG	-10	NA	24213085	24209733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213023
WTC11_00027421	chr14	-	716	3	FSM	ENSG00000254505.11	ENST00000552620.1	716	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	332.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGATGAGGTGATTGGG	-24212080	False	NA	NA	False	NA	NA	NA	24212109	24210664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24210769_24211410_24211593_24211679
WTC11_00027423	chr14	-	2001	7	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_1	51.7096595317441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	-24240706	True	NA	-46	True	AATGAA	-45	NA	24242623	24239681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
WTC11_00027426	chr14	-	680	6	FSM	ENSG00000100949.15	ENST00000560521.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.3595599698933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24266761	False	NA	-2	True	AATAAA	-29	NA	24268163	24265537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265756_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109
WTC11_00027427	chr14	-	1997	16	FSM	ENSG00000100949.15	ENST00000560998.5	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	21.9072793584436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATGGAGAGGCCCTC	-24270108	True	NA	-34	True	NA	NA	NA	24271510	24265569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
WTC11_00027428	chr14	-	2409	8	FSM	ENSG00000136305.12	ENST00000336557.9	2409	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	14.3299315691147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	-24311083	True	NA	-1	True	AATAAA	-23	NA	24311395	24305186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307921_24308478_24308831_24310406_24310549_24310648
WTC11_00027429	chr14	-	467	2	FSM	ENSG00000139910.20	ENST00000547415.1	500	2	0	33	0	-33	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGATTTCAGAGCCATG	-26595468	False	NA	NA	False	TTTAAA	-26	NA	26595478	26549383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26549782_26595409
WTC11_00027430	chr14	-	2985	3	FSM	ENSG00000258932.5	ENST00000556890.1	578	3	-45	-2362	-36	2266	multi-exon	FALSE	canonical	0	0	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGATATTTTGTAGGCAA	-27672567	True	NA	NA	False	ATTAAA	-26	NA	27673266	27319559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_27322142_27656337_27656503_27673028
WTC11_00027431	chr14	-	1940	2	FSM	ENSG00000257056.3	ENST00000656598.1	2043	2	103	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAAGTATCTGGTTAGC	NA	False	NA	NA	False	AATATA	-24	NA	28785695	28783113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_28784968_28785609
WTC11_00027432	chr14	-	3891	17	NNC	ENSG00000196792.12	novel	3970	16	NA	NA	0	11678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6163657557973	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTATAGTGATTATCT	-31026309	False	NA	NA	False	NA	NA	NA	31026319	30882120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_30882150_30893824_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
WTC11_00027433	chr14	-	2208	15	FSM	ENSG00000196792.12	ENST00000555358.5	2208	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	23.0602582423546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGTTACTGATATGAC	-31026309	False	NA	NA	False	NA	NA	NA	31026319	30895344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
WTC11_00027435	chr14	-	8847	43	FSM	ENSG00000092148.14	ENST00000692835.1	8851	43	9	-5	0	2	multi-exon	FALSE	canonical	3	62	junction_19	53.6230492036372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCATGTGACTAT	-31203477	True	NA	-1	True	ATTAAA	-17	NA	31207709	31100114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129308_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
WTC11_00027437	chr14	-	7833	37	NNC	ENSG00000129493.15	novel	7811	36	NA	NA	0	73440	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.6107766732579	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-31419272	True	NA	NA	False	NA	NA	NA	31420550	31218347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_31218373_31291790_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
WTC11_00027439	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	30.7774267930248	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	-33948129	False	NA	NA	False	NA	NA	NA	33950826	33925398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
WTC11_00027440	chr14	-	1178	5	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	156.436089186607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTCTGTATTGTTTT	-34535172	True	NA	-12	True	ATTAAA	-16	NA	34539698	34515941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_34516587_34524696_34524808_34533443_34533540_34536093_34536276_34539554
WTC11_00027446	chr14	-	209	1	FSM	ENSG00000207046.1	ENST00000384319.1	105	1	31	-135	31	135	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGACACTTATGTGGCC	NA	False	NA	NA	False	NA	NA	NA	37434542	37434333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_37434300_37434500
WTC11_00027447	chr14	-	3724	2	FSM	ENSG00000100934.15	ENST00000554615.1	3813	2	101	-12	-88	12	multi-exon	FALSE	canonical	3	717	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATCTAGTAAAACCTG	-39041320	False	NA	-3	True	AATAAA	-30	NA	39041332	39031906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39033329_39039030
WTC11_00027449	chr14	-	364	2	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTCTTCAGTTACTTCA	NA	False	NA	NA	False	NA	NA	NA	41521883	41515958	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_41516055_41521615
WTC11_00027450	chr14	-	1654	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTAAGAGGTGGGCTA	NA	False	NA	NA	False	NA	NA	NA	41521883	41520229	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_41520200_41521900
WTC11_00027452	chr14	-	1137	3	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	820.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGATTCTTCAGTTA	-47104932	False	NA	NA	False	NA	NA	NA	47105499	47104288	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104437_47104468_47105258_47105299
WTC11_00027453	chr14	-	3632	6	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2343	-2	multi-exon	FALSE	canonical	3	64	junction_3	135.323907717742	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAACTGTATGTCTGA	-48267795	False	NA	-8	True	AATAAA	-17	NA	48267952	48233744	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48258565_48259014_48260392_48262484_48265560_48265755_48267723
WTC11_00027454	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49598676	False	NA	-35	True	AATAAA	-13	NA	49598690	49583578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949_49586050_49598399
WTC11_00027455	chr14	-	551	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	10125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2929.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	-49559862	True	NA	NA	False	NA	NA	NA	49620626	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608438_49618687_49619141_49620561
WTC11_00027456	chr14	-	559	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	10125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2929.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTAAGGAGGGAAG	-49559862	True	NA	NA	False	NA	NA	NA	49620626	49608404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608449_49618690_49619141_49620561
WTC11_00027458	chr14	-	310	3	FSM	ENSG00000100479.13	ENST00000554671.5	300	3	0	-10	0	1	multi-exon	FALSE	canonical	0	0	junction_1	1	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCTGCTTAAATTTGT	NA	False	NA	-12	True	AATAAA	-18	NA	49647360	49643553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49646569_49646695_49647292
WTC11_00027459	chr14	-	1593	18	NNC	ENSG00000100479.13	novel	1692	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	24.0148454662562	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-49687421	True	NA	-13	True	AATAAA	-17	NA	49688202	49643554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49655004_49655095_49655670_49655812_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
WTC11_00027461	chr14	-	4577	33	NIC	ENSG00000165525.18	novel	5819	33	NA	NA	17	534	combination_of_known_junctions	FALSE	canonical	3	21	junction_20	38.1891749837241	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTTCAGCATTTTGAT	-49850252	True	NA	NA	False	ATTAAA	-29	NA	49852763	49783279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828788_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
WTC11_00027462	chr14	-	481	2	FSM	ENSG00000165525.18	ENST00000554275.1	873	2	392	0	392	0	multi-exon	FALSE	canonical	3	237	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATGTGGAGACTGACAG	NA	False	NA	NA	False	AAAAAG	-41	NA	49786782	49784904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49785321_49786717
WTC11_00027465	chr14	-	255	2	Genic_Genomic	ENSG00000278771.1	novel	299	1	NA	NA	-18966	-17	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGACCCTGCCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	49872880	49853632	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_49853869_49872861
WTC11_00027467	chr14	-	5402	10	FSM	ENSG00000100490.10	ENST00000395834.6	5402	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	4.26296135405575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACCTAGTTTACATTTT	-50396822	True	NA	NA	False	ATTAAA	-21	NA	50396881	50326264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50330182_50332261_50332433_50334564_50334622_50338946_50339030_50341031_50341233_50342131_50342223_50344985_50345059_50359027_50359150_50395700_50396330_50396823
WTC11_00027468	chr14	-	410	1	FSM	ENSG00000243103.3	ENST00000482923.3	291	1	-223	104	-223	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGGGAGCAGGTTAAT	-50638170	False	NA	NA	False	NA	NA	NA	50638204	50637794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50637800_50638200
WTC11_00027469	chr14	-	3903	3	FSM	ENSG00000269906.1_ENSG00000151748.15	ENST00000556735.1	562	3	-251	-3090	-242	0	multi-exon	FALSE	canonical	3	6	junction_1	13	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTTCAGATTCAAGTA	-50668531	False	NA	-2	True	AATAAA	-17	NA	50668548	50662510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50665620_50667381_50667501_50667873
WTC11_00027470	chr14	-	1405	1	FSM	ENSG00000270062.1	ENST00000602615.1	496	1	-913	4	-913	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGATTTGCCTTTATA	NA	False	NA	-2	True	AATAAA	-15	NA	50725185	50723780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50723800_50725200
WTC11_00027471	chr14	-	6409	30	NIC	ENSG00000100503.26	novel	6496	30	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_27	19.8886316633684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTAAGAACTTAGGAT	-50829522	True	NA	-10	True	AATAAA	-19	NA	50831136	50725827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50794435_50794526_50806736_50806819_50830463_50830518_50831005
WTC11_00027472	chr14	-	1287	3	FSM	ENSG00000100503.26	ENST00000673819.1	1287	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAAATGGCTACTGAAA	-50761854	False	NA	NA	False	NA	NA	NA	50761867	50757787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50758631_50759993_50760360_50761789
WTC11_00027474	chr14	-	1135	1	FSM	ENSG00000273888.1	ENST00000617151.1	2229	1	188	906	188	-906	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	-51651543	False	NA	NA	False	NA	NA	NA	51651556	51650421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_51650400_51651600
WTC11_00027476	chr14	-	566	5	FSM	ENSG00000087301.9	ENST00000555312.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.5166629646081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCCCTGCTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	52470674	52455440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52455463_52457089_52457175_52462811_52462971_52470036_52470174_52470511
WTC11_00027489	chr14	-	796	4	FSM	ENSG00000100575.14	ENST00000555593.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.029654171124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTTTATACTGTATG	-58427441	False	NA	-17	True	AATAAA	-16	NA	58427505	58408647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58427391
WTC11_00027490	chr14	-	4006	4	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	21	-8	intron_retention	FALSE	canonical	3	30	junction_3	27.7608837515427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATAAACTAACTCTCATT	-59483268	True	NA	-33	True	AATAAA	-6	NA	59484387	59472872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_59476007_59476091_59476215_59479181_59479352_59483808
WTC11_00027493	chr14	-	4938	3	NIC	ENSG00000100625.9	novel	2003	4	NA	NA	-15	2974	intron_retention	FALSE	canonical	3	12	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAACAGCCCTGTGGCA	-60724333	True	NA	38	True	ATTAAA	-13	NA	60724366	60716827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_60720446_60720979_60721145_60723211
WTC11_00027494	chr14	-	2693	4	NNC	ENSG00000100625.9	novel	1573	3	NA	NA	39	2910	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	45.7116566704332	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCATATGCAGTGTTTT	-60722349	True	NA	-26	True	ATTAAA	-24	NA	60724309	60716891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_60718009_60719759_60720446_60723211_60724048_60724255
WTC11_00027501	chr14	-	1085	8	FSM	ENSG00000100554.12	ENST00000555431.5	1085	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	133.848223517443	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCTTGGCGCTGTTGTC	-67356342	True	NA	NA	False	NA	NA	NA	67359787	67338250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67359657
WTC11_00027504	chr14	-	5645	1	FSM	ENSG00000258626.2	ENST00000553847.2	315	1	-115	-5215	-115	5215	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-67652714	False	NA	NA	False	AGTAAA	-19	NA	67652729	67647084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67647100_67652700
WTC11_00027517	chr14	-	3324	10	NNC	ENSG00000133961.21	novel	3604	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	93.0783554158193	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-13	True	AATAAA	-15	NA	73355766	73275215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284366_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625
WTC11_00027518	chr14	-	2756	11	NNC	ENSG00000133961.21	novel	3604	13	NA	NA	0	-264	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	100.207584543287	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATGAGTTGTAAGTAA	-73452301	True	NA	NA	False	TTTAAA	-21	NA	73458546	73275936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284366_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
WTC11_00027528	chr14	-	581	2	FSM	ENSG00000198208.12	ENST00000557383.1	595	2	14	0	14	0	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCAGTGGAGCCAGCCC	-74921023	False	NA	NA	False	NA	NA	NA	74921759	74919871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74919970_74921276
WTC11_00027529	chr14	-	1693	7	FSM	ENSG00000119630.14	ENST00000238607.10	1693	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.2916013582513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGTATTCTAGTGTG	-74955366	True	NA	-28	True	NA	NA	NA	74955577	74941857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953944_74955167
WTC11_00027536	chr14	-	468	3	FSM	ENSG00000170348.9	ENST00000556969.5	1314	3	8	838	8	-276	multi-exon	FALSE	canonical	3	1841	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGCCAGAACTGATCT	-75147719	False	NA	NA	False	NA	NA	NA	75147773	75134775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75135007_75135759_75135887_75147663
WTC11_00027540	chr14	-	3701	3	NIC	ENSG00000177108.5	novel	3408	3	NA	NA	-286	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	67	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTTGATATGATTGT	-77141009	False	NA	-10	True	AATAAA	-15	NA	77141030	77131275	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77133949_77139212_77139753_77140542
WTC11_00027541	chr14	-	5145	21	NIC	ENSG00000009830.13	novel	2828	22	NA	NA	11	-3	intron_retention	FALSE	canonical	3	15	junction_3	21.3337174444587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATGCCTTGTTGTCCTT	-77319585	True	NA	-8	True	AATAAA	-12	NA	77320872	77274960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279536_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
WTC11_00027551	chr14	-	1268	11	ISM	ENSG00000054983.17	ENST00000557316.5	1874	16	1	21921	1	-2	5prime_fragment	FALSE	canonical	2	4	junction_4	36.0749220373378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTTGTTTTACATGT	-87992206	True	NA	0	True	AATAAA	-12	NA	87993169	87963315	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87981413_87981448_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
WTC11_00027552	chr14	-	2704	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	63.4256756095717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-89612640	True	NA	6	True	NA	NA	NA	89619130	89161399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_89162970_89180700_89180807_89190386_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
WTC11_00027557	chr14	-	7638	31	NNC	ENSG00000015133.20	novel	7519	30	NA	NA	-72	81343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.0762983058051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAACAGAGTGCCTG	-91417885	False	NA	NA	False	NA	NA	NA	91417916	91189979	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_91190006_91271325_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
WTC11_00027580	chr14	-	461	3	NIC	ENSG00000197119.13	novel	1050	2	NA	NA	1	-256	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGCGTCGGAGCCTG	-100300227	True	NA	NA	False	NA	NA	NA	100306423	100305208	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_100305328_100305659_100305777_100306198
WTC11_00027581	chr14	-	2735	6	FSM	ENSG00000183092.18	ENST00000557378.6	2750	6	14	1	14	-1	multi-exon	FALSE	canonical	1	3	junction_4	2.13541565040626	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGGTTGGGCTGTTTCT	-100568045	False	NA	1	True	AATAAA	-18	NA	100568056	100537147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910
WTC11_00027599	chr15	+	233	2	ISM	ENSG00000258780.1	ENST00000554269.1	1141	9	3777	2957	3777	-2957	internal_fragment	FALSE	canonical	3	39	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAAATATGATTACAATA	NA	False	NA	NA	False	NA	NA	NA	20157552	20157869	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_20157606_20157689
WTC11_00027600	chr15	+	1492	1	FSM	ENSG00000273679.1	ENST00000616872.1	1835	1	134	209	134	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGCTGGAGCTGAGCAA	NA	False	NA	NA	False	NA	NA	NA	22371869	22373361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22371900_22373400
WTC11_00027601	chr15	+	6045	35	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-719	0	at_least_one_novel_splicesite	TRUE	canonical	3	97	junction_3	137.968716678843	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494850	22590815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
WTC11_00027602	chr15	+	5746	32	FSM	ENSG00000276550.5	ENST00000619021.4	5746	32	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	141.516184180523	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22516908	22590815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
WTC11_00027603	chr15	+	5928	4	ISM	ENSG00000276550.5	ENST00000690192.1	1766	5	-1616	5	-1616	0	intron_retention	FALSE	canonical	3	527	junction_2	109.492769928734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	22575124	False	NA	NA	False	AATAAA	-20	NA	22575142	22590815	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_22577333_22577429_22577556_22579583_22579724_22587343
WTC11_00027606	chr15	+	6571	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	118	junction_2	15.4656878282215	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	22785481	True	NA	9	True	AATAAA	-21	NA	22786625	22829789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
WTC11_00027607	chr15	+	6624	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	-169	-5873	0	0	multi-exon	FALSE	canonical	3	17	junction_4	56.9048328351819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	22785499	True	NA	9	True	AATAAA	-21	NA	22786643	22829789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
WTC11_00027608	chr15	+	742	3	FSM	ENSG00000140157.16	ENST00000559571.1	673	3	-80	11	-48	0	multi-exon	FALSE	canonical	3	47	junction_1	46	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCGGTTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	22838595	22851665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22839175_22839654_22839791_22851638
WTC11_00027610	chr15	+	3249	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	-22	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	295.130825366705	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	22827122	True	NA	9	True	AATAAA	-21	NA	22838643	22868384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00027611	chr15	+	4091	7	FSM	ENSG00000140157.16	ENST00000674173.1	4076	7	-15	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	326.930888041426	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827122	True	NA	NA	False	NA	NA	NA	22838643	22869362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00027612	chr15	+	1704	6	FSM	ENSG00000140157.16	ENST00000674330.1	1691	6	-13	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	336.056780916559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATGAAGTGAATTTGA	22827154	True	NA	10	True	ATTAAA	-14	NA	22838675	22866876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22839175_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00027613	chr15	+	1434	5	FSM	ENSG00000140157.16	ENST00000539711.2	1412	5	-22	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	359.284966983034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGTCCTCAAAT	22827154	True	NA	50	True	NA	NA	NA	22838675	22866916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22851638_22851871_22858539_22858631_22860628_22860790_22866212
WTC11_00027614	chr15	+	2455	7	FSM	ENSG00000140157.16	ENST00000674477.1	2099	7	-38	-318	3	0	multi-exon	FALSE	canonical	3	139	junction_2	297.1146897898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827126	True	NA	8	True	AATAAA	-9	NA	22838647	22867716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00027615	chr15	+	2291	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	-11	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	173.757762416532	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827154	True	NA	8	True	AATAAA	-9	NA	22838675	22867716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00027619	chr15	+	2014	1	FSM	ENSG00000274099.1	ENST00000614297.1	2181	1	55	112	55	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTCTTGACCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	23179923	23181937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_23179900_23181900
WTC11_00027621	chr15	+	1856	4	FSM	ENSG00000274471.2	ENST00000649848.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	15.084944665313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTCCTGGTTTTTGT	23310177	False	NA	NA	False	AATAAA	-18	NA	23310880	23314566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_23310975_23311337_23311513_23311604_23311730_23313104
WTC11_00027622	chr15	+	514	5	FSM	ENSG00000128739.23	ENST00000400098.6	525	5	11	0	1	0	multi-exon	FALSE	canonical	3	29	junction_1	3464.40662307415	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCTGAACTGAGGCAGG	24823445	True	NA	NA	False	NA	NA	NA	24823647	24967985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24823824_24886515_24886590_24920010_24920125_24962113_24962210_24967931
WTC11_00027623	chr15	+	1599	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	6	0	6	0	multi-exon	FALSE	canonical	3	30	junction_1	3407.22137828776	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24856162	True	NA	21	True	AATAAA	-23	NA	24856556	24978582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00027625	chr15	+	2068	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	-51	-1367	-51	946	multi-exon	FALSE	canonical	3	7503	junction_1	270.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTAGTATTCCTGTAGA	24828723	True	NA	NA	False	NA	NA	NA	24954934	24969775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931
WTC11_00027626	chr15	+	908	7	FSM	ENSG00000128739.23	ENST00000584968.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	3331.19222901751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTGAAGAAAAGCGGGTT	24828723	True	NA	NA	False	ACTAAA	-43	NA	24954934	24976327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967028_24967241_24967931_24968083_24974310_24974457_24975357_24975510_24976304
WTC11_00027627	chr15	+	1776	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	-13	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	3480.33846553906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	24828723	True	NA	-22	True	NA	NA	NA	24954934	24978539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00027628	chr15	+	1444	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	-140	0	0	multi-exon	FALSE	canonical	3	338	junction_3	2321.71193755549	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	24828723	True	NA	8	True	GATAAA	-20	NA	24954934	24978723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00027630	chr15	+	1469	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	7282	junction_5	263.817464018187	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	24828774	True	NA	8	True	GATAAA	-20	NA	24954985	24978723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00027631	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	3647.5855941522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	24828802	True	NA	22	True	AATAAA	-23	NA	24955013	24968829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
WTC11_00027632	chr15	+	1730	4	NIC	ENSG00000214265.11	novel	1325	8	NA	NA	26960	2128	combination_of_known_splicesites	FALSE	canonical	3	223	junction_1	262.620554328018	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	24981980	False	NA	21	True	AATATA	-20	NA	24981993	25002404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_24998969_24999079_25000244_25000375_25001357
WTC11_00027633	chr15	+	6433	5	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	285.492885200315	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	24981980	False	NA	21	True	AATATA	-20	NA	24981993	25002404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24993783_24998487_24998969_24999079_25000244_25000375_25001357
WTC11_00027634	chr15	+	2097	5	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	286.723298669641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	24981980	False	NA	21	True	AATATA	-20	NA	24981993	25002404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24998119_24998487_24998969_24999079_25000244_25000375_25001357
WTC11_00027635	chr15	+	19655	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	-2792	combination_of_known_splicesites	FALSE	canonical	3	625	junction_1	140.117411084022	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	24981980	False	NA	NA	False	NA	NA	NA	24981993	25039636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
WTC11_00027636	chr15	+	1805	5	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	852	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	404.997222212696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTACAGCCATTAGTG	24981980	False	NA	5	True	ATTAAA	-16	NA	24981993	25021677	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_24998969_24999079_25019026_25019149_25019827_25019870_25020589
WTC11_00027637	chr15	+	2302	7	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	852	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	375.49112284225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTACAGCCATTAGTG	24981980	False	NA	5	True	ATTAAA	-16	NA	24981993	25021677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24998119_24998487_24998969_24999079_25000244_25000375_25019026_25019149_25019827_25019870_25020589
WTC11_00027640	chr15	+	527	1	Genic_Genomic	ENSG00000224078.15	novel	NA	NA	NA	NA	-63	-5141	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATTTTGGGAGGCTGA	25015146	False	NA	NA	False	NA	NA	NA	25015157	25015684	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_+_25015200_25015700
WTC11_00027641	chr15	+	6631	3	FSM	ENSG00000224078.15	ENST00000656463.1	6631	3	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_1	21	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	25015209	False	NA	NA	False	NA	NA	NA	25015220	25023250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25019149_25019827_25019870_25020589
WTC11_00027648	chr15	+	9720	38	FSM	ENSG00000224078.15	ENST00000669673.1	9720	38	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_21	550.229327314495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25041962	False	NA	1	True	AATAAA	-9	NA	25041973	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091768_25091932_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027649	chr15	+	9319	36	FSM	ENSG00000224078.15	ENST00000667393.1	9319	36	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	552.976283950989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25041962	False	NA	1	True	AATAAA	-9	NA	25041973	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027650	chr15	+	6462	35	FSM	ENSG00000224078.15	ENST00000656510.1	6462	35	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_17	553.149313924197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGCCATCTGTATTT	25042321	True	NA	29	True	NA	NA	NA	25042338	25120129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00027651	chr15	+	13670	39	NNC	ENSG00000224078.15	novel	9815	40	NA	NA	1913	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	544.502614911471	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25044218	False	NA	9	True	CATAAA	-2	NA	25044251	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25051237_25053827_25053968_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027652	chr15	+	7274	36	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-296	-8	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	543.788528824977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAAACCCTTCACCTAT	25050218	False	NA	1	True	NA	NA	NA	25050229	25120400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25051237_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027653	chr15	+	9815	40	FSM	ENSG00000224078.15	ENST00000654223.1	9815	40	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	554.042526915133	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25050508	False	NA	1	True	AATAAA	-9	NA	25050525	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027655	chr15	+	11055	38	FSM	ENSG00000224078.15	ENST00000660717.1	11055	38	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	554.977937689538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25054104	False	NA	1	True	AATAAA	-9	NA	25054205	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095718_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027656	chr15	+	8250	35	FSM	ENSG00000224078.15	ENST00000670542.1	8250	35	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	541.239616680412	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25059652	True	NA	1	True	AATAAA	-9	NA	25059667	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027660	chr15	+	5869	31	NIC	ENSG00000224078.15	novel	8307	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	515.2598524585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25064979	True	NA	9	True	CATAAA	-2	NA	25065025	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25065455_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027661	chr15	+	8201	32	FSM	ENSG00000224078.15	ENST00000666289.1	8201	32	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	521.659817947262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25064979	True	NA	1	True	AATAAA	-9	NA	25065025	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027662	chr15	+	8307	33	FSM	ENSG00000224078.15	ENST00000657237.1	8307	33	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	553.279113417224	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25064979	True	NA	1	True	AATAAA	-9	NA	25065025	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25080124_25080230_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027663	chr15	+	8498	34	FSM	ENSG00000224078.15	ENST00000653407.1	8498	34	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	559.172539002637	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25065045	False	NA	1	True	AATAAA	-9	NA	25065091	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027664	chr15	+	9585	30	FSM	ENSG00000224078.15	ENST00000671374.1	9585	30	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_19	476.405045044775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTGTATGAAGAGA	25070052	True	NA	95	True	TATAAA	-26	NA	25070146	25122561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25117516_25118267_25118383_25119064
WTC11_00027665	chr15	+	7338	29	FSM	ENSG00000224078.15	ENST00000660542.1	7338	29	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	610.713805346511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25075646	True	NA	1	True	AATAAA	-9	NA	25075770	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081184_25082646_25082706_25083395_25083528_25085189_25085323_25086509_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027667	chr15	+	6939	25	FSM	ENSG00000224078.15	ENST00000661738.1	6939	25	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	436.546180499078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25078857	False	NA	1	True	AATAAA	-9	NA	25078870	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027668	chr15	+	5069	27	NNC	ENSG00000224078.15	novel	6939	25	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	3	161	junction_15	572.19358483009	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25078860	False	NA	27	True	CATAAA	-20	NA	25078873	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027669	chr15	+	5027	20	FSM	ENSG00000224078.15	ENST00000553108.2	5027	20	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	430.568470462286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATTAATAACCTGGTGA	25078943	False	NA	NA	False	NA	NA	NA	25078953	25111998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554
WTC11_00027671	chr15	+	13216	24	FSM	ENSG00000224078.15	ENST00000660956.1	13199	24	-17	0	-17	0	multi-exon	FALSE	canonical	3	215	junction_1	510.31633319382	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTGTATGAAGAGA	25079017	False	NA	95	True	TATAAA	-26	NA	25079040	25122561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25117516_25118267_25118383_25119064
WTC11_00027672	chr15	+	6860	25	FSM	ENSG00000224078.15	ENST00000665906.1	6860	25	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_19	548.512190624683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25080986	True	NA	1	True	AATAAA	-9	NA	25081095	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25110385_25110537_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027673	chr15	+	8842	17	FSM	ENSG00000224078.15	ENST00000546682.5	8842	17	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_8	477.843789851872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGGAATCCAGAAAACA	25081044	True	NA	NA	False	NA	NA	NA	25081153	25113927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554
WTC11_00027674	chr15	+	4282	22	FSM	ENSG00000224078.15	ENST00000655258.1	4259	22	-23	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	562.216753578667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25081044	True	NA	9	True	CATAAA	-2	NA	25081153	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081225_25082588_25082706_25083395_25083528_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00027675	chr15	+	8095	22	FSM	ENSG00000224078.15	ENST00000661541.1	8095	22	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	494.540222576518	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25082542	True	NA	1	True	AATAAA	-9	NA	25082671	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027676	chr15	+	4554	23	FSM	ENSG00000224078.15	ENST00000658859.1	4554	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_21	572.911761411508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	25082638	False	NA	12	True	AATAAA	-2	NA	25082767	25119875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00027677	chr15	+	8232	22	FSM	ENSG00000224078.15	ENST00000668419.1	8232	22	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	624.359583003968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	25082638	False	NA	27	True	AATAAA	-17	NA	25082767	25119890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25089613_25091720_25093833_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00027679	chr15	+	7640	22	FSM	ENSG00000224078.15	ENST00000661889.1	7640	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	535.815220121059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25085370	False	NA	1	True	AATAAA	-9	NA	25085384	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027680	chr15	+	7238	20	FSM	ENSG00000224078.15	ENST00000655993.1	7238	20	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	388.062257620441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25086475	False	NA	1	True	AATAAA	-9	NA	25086526	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027682	chr15	+	1236	1	FSM	ENSG00000261069.3	ENST00000567527.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATTACTCCAACAGGGG	25087650	False	NA	NA	False	NA	NA	NA	25087660	25088896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25087700_25088900
WTC11_00027687	chr15	+	4726	21	NNC	ENSG00000224078.15	novel	6463	21	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_15	623.994991967083	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25089166	False	NA	27	True	CATAAA	-20	NA	25089176	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25110492_25110537_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027689	chr15	+	9720	18	FSM	ENSG00000224078.15	ENST00000669778.1	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_6	449.340808996643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25089535	False	NA	1	True	AATAAA	-9	NA	25089545	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25091720_25093833_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027702	chr15	+	4083	16	NNC	ENSG00000224078.15	novel	6540	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	338	junction_1	385.352906077302	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25096185	False	NA	9	True	CATAAA	-2	NA	25096327	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027703	chr15	+	6432	15	FSM	ENSG00000224078.15	ENST00000669814.1	6429	15	-3	0	-3	0	multi-exon	FALSE	canonical	3	954	junction_3	239.849836100738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25096185	False	NA	1	True	AATAAA	-9	NA	25096327	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027705	chr15	+	7553	16	FSM	ENSG00000224078.15	ENST00000654058.1	7549	16	-4	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	512.178718808191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25096188	False	NA	1	True	AATAAA	-9	NA	25096330	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25097440_25098716_25098829_25099144_25100291_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027707	chr15	+	8738	13	FSM	ENSG00000224078.15	ENST00000671121.1	8738	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	556.979072766653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25099427	False	NA	1	True	AATAAA	-9	NA	25099498	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25099647_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027711	chr15	+	5196	11	FSM	ENSG00000224078.15	ENST00000657002.1	5196	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	509.411709720144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25106450	False	NA	1	True	AATAAA	-9	NA	25106520	25122467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25106886_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027712	chr15	+	2256	10	FSM	ENSG00000224078.15	ENST00000663996.1	2256	10	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_8	132.608120340524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	25107399	False	NA	27	True	AATAAA	-17	NA	25107469	25119890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00027713	chr15	+	1747	5	FSM	ENSG00000224078.15	ENST00000626200.3	1747	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	715.074602751349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25109558	True	NA	27	True	CATAAA	-20	NA	25109681	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25109716_25111764_25111895_25117409_25117516_25118267_25118383_25119064
WTC11_00027714	chr15	+	559	6	FSM	ENSG00000186297.12	ENST00000555182.5	549	6	-10	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	74.4542812738126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTCGTTTACGTCTGG	26864983	True	NA	NA	False	NA	NA	NA	26867061	26937199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867112_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184
WTC11_00027715	chr15	+	2690	11	NNC	ENSG00000186297.12	novel	2553	11	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	74.4008736507845	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26866743	False	NA	17	True	AATAAA	-20	NA	26866761	26949207	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
WTC11_00027716	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	48.2684161745546	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	26864983	True	NA	18	True	AATAAA	-21	NA	26867061	26949208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
WTC11_00027718	chr15	+	2767	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	-6	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	43.1768456467121	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865041	True	NA	17	True	AATAAA	-20	NA	26867119	26949207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
WTC11_00027719	chr15	+	653	5	FSM	ENSG00000186297.12	ENST00000554038.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	56.2599991112691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCGACACGGAAATGGT	26865084	True	NA	NA	False	NA	NA	NA	26867162	26883215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165
WTC11_00027720	chr15	+	2395	10	NNC	ENSG00000186297.12	novel	2761	11	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	84.970583144992	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTCTTTTTTTTTTTT	26865096	True	NA	22	True	AATAAA	-25	NA	26867174	26949212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_26867385_26868728_26868794_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
WTC11_00027721	chr15	+	2758	11	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	46.9754191040378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865084	True	NA	17	True	AATAAA	-20	NA	26867162	26949207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
WTC11_00027723	chr15	+	422	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	2	-15	2	15	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGGTGTGGTGGTGCA	NA	False	NA	21	True	AATAAA	-34	NA	28315652	28316074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28315700_28316100
WTC11_00027724	chr15	+	2453	1	FSM	ENSG00000261524.1	ENST00000561950.1	2166	1	39	-326	39	326	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTCAAATAACAACTTT	NA	False	NA	NA	False	AATATA	-45	NA	28402906	28405359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28402900_28405400
WTC11_00027725	chr15	+	292	2	FSM	ENSG00000206149.11	ENST00000507787.1	1023	2	0	731	0	-731	multi-exon	FALSE	canonical	3	121	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAACTTAAAATGTAACA	NA	False	NA	NA	False	NA	NA	NA	28589491	28590392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28589549_28590157
WTC11_00027726	chr15	+	754	6	ISM	ENSG00000206149.11	ENST00000529537.2	1001	8	22654	0	-20981	0	3prime_fragment	FALSE	canonical	2	2	junction_3	45.6990153066781	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGCCAGTATTTGGA	NA	False	NA	NA	False	NA	NA	NA	28612141	28633274	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28612174_28618218_28618379_28618523_28618656_28629265_28629442_28632636_28632808_28633191
WTC11_00027727	chr15	+	1391	10	NNC	ENSG00000206149.11	novel	1557	11	NA	NA	-20094	2890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.2521753301307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAAGGTGATAGATTTT	NA	False	NA	NA	False	NA	NA	NA	28613028	28637334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28613058_28618218_28618379_28618523_28618656_28629265_28629442_28632636_28632808_28633191_28633296_28633589_28633741_28636486_28636702_28636974_28637108_28637214
WTC11_00027728	chr15	+	4403	24	NNC	ENSG00000206149.11	novel	5187	33	NA	NA	4337	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	191.086931790076	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTTTTATGTCTCA	NA	False	NA	NA	False	AATAAA	-35	NA	28637461	28685277	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28637631_28640258_28640393_28640921_28641093_28641169_28641313_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651556_28654286_28654456_28655272_28655421_28655795_28656027_28657186_28657326_28658622_28658767_28660540_28660599_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684391
WTC11_00027729	chr15	+	4600	25	NNC	ENSG00000206149.11	novel	5187	33	NA	NA	4337	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	189.131108992912	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTTTTATGTCTCA	NA	False	NA	NA	False	AATAAA	-35	NA	28637461	28685277	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28637631_28640258_28640393_28640921_28641093_28641169_28641313_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651556_28654286_28654456_28655272_28655421_28655494_28655692_28655795_28656027_28657186_28657326_28658622_28658767_28660540_28660599_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684391
WTC11_00027730	chr15	+	519	4	ISM	ENSG00000261377.6	ENST00000566321.5	1069	7	6966	47	6966	-47	3prime_fragment	FALSE	canonical	1	3	junction_3	77.2024754928378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATATAGTTTTGGCATGG	NA	False	NA	NA	False	NA	NA	NA	28808331	28818952	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28808418_28815346_28815596_28816752_28816888_28818903
WTC11_00027731	chr15	+	472	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	13	49	-13	multi-exon	FALSE	canonical	3	47	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATCATTTTTATGT	28831779	True	NA	31	True	ATTAAA	-45	NA	28832379	28838975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28832461_28833275_28833379_28838687
WTC11_00027732	chr15	+	4047	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	15.4579023661728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCGTGTGTGTGACTG	28885795	False	NA	4	True	AATAAA	-16	NA	28885827	29118311	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
WTC11_00027733	chr15	+	4020	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	21.2511050878683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGACTGGTCT	28885795	False	NA	8	True	AATAAA	-20	NA	28885827	29118315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_28886279_28921639_28921719_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
WTC11_00027734	chr15	+	2555	12	FSM	ENSG00000034053.15	ENST00000559814.5	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16.7790700005288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGGCTCCCTTGTCCC	28885975	True	NA	NA	False	NA	NA	NA	28886159	29108620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269
WTC11_00027736	chr15	+	2142	2	FSM	ENSG00000256802.3	ENST00000536835.3	2588	2	52	394	-4	-394	multi-exon	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTTTCAGACGAGG	NA	False	NA	NA	False	NA	NA	NA	29674983	29678774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_29675527_29677175
WTC11_00027738	chr15	+	478	3	FSM	ENSG00000178081.12	ENST00000566138.5	533	3	-2	57	0	-57	multi-exon	FALSE	canonical	3	7	junction_2	4	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGATCATAAAGGACTTA	NA	False	NA	NA	False	NA	NA	NA	30103719	30113971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30104009_30110301_30110427_30113907
WTC11_00027739	chr15	+	8317	15	FSM	ENSG00000284906.3	ENST00000685924.1	7464	15	-862	9	719	-9	multi-exon	TRUE	canonical	2	4	junction_11	48.0620347433759	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGCTTTCAAAAAGTTT	NA	False	NA	11	True	AATAAA	-14	NA	30625266	30772993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30658765_30658845_30716219_30716343_30748575_30748671_30750401_30750557_30767857
WTC11_00027743	chr15	+	5037	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	-240	52	-177	0	multi-exon	FALSE	canonical	3	152	junction_10	27.8047125648931	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	30903674	30943056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00027744	chr15	+	4731	15	FSM	ENSG00000198690.10	ENST00000657391.1	4442	15	0	-289	0	0	multi-exon	FALSE	canonical	3	18	junction_1	54.4078044371712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	30899952	True	NA	NA	False	NA	NA	NA	30903863	30943056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00027746	chr15	+	7930	13	FSM	ENSG00000198690.10	ENST00000655421.1	7929	13	-1	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	24.9581594317815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	30899980	True	NA	NA	False	NA	NA	NA	30903891	30943056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00027748	chr15	+	3929	8	FSM	ENSG00000198690.10	ENST00000666852.1	3918	8	-11	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	23.3710094269086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAACATCCCTAAAATA	30899989	True	NA	NA	False	NA	NA	NA	30903900	30923848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234
WTC11_00027749	chr15	+	6476	12	FSM	ENSG00000198690.10	ENST00000661974.1	6476	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	55.9958676161254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAATAAATATTTGC	30901258	False	NA	NA	False	NA	NA	NA	30905169	30943079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30905898_30908117_30908259_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00027750	chr15	+	6701	4	FSM	ENSG00000198690.10	ENST00000562881.2	6701	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	15.9652400197707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATATTTGCAAA	NA	False	NA	NA	False	NA	NA	NA	30924483	30943082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00027751	chr15	+	6845	2	FSM	ENSG00000169926.11	ENST00000307145.4	6845	2	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGAGCTAGTTTCTT	NA	False	NA	21	True	AATAAA	-21	NA	31326834	31377899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_31327790_31372009
WTC11_00027752	chr15	+	6149	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	-4	4	-1	-4	multi-exon	FALSE	canonical	3	21	junction_9	3.93778781037097	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGCGTAGTTTTGTA	32029835	True	NA	NA	False	AATAAA	-23	NA	32030510	32173014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
WTC11_00027753	chr15	+	846	8	FSM	ENSG00000175344.19	ENST00000636044.1	846	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.32257809350258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACAGTGATCGTGCTGC	32029919	True	NA	NA	False	NA	NA	NA	32030594	32163271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32157607_32157776_32158411_32158607_32159568_32159656_32163225
WTC11_00027754	chr15	+	5873	12	NIC	ENSG00000198826.11	novel	5876	12	NA	NA	-71	13	intron_retention	TRUE	canonical	3	35	junction_8	85.0585602845825	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAACTTAATACATAGAA	NA	False	NA	23	True	AATAAA	-27	NA	32615432	32639954	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629676_32632978_32633109_32633932_32634042_32635776_32635916_32636256
WTC11_00027755	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_11	24.829667671844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	32614982	True	NA	10	True	AATAAA	-14	NA	32615503	32639941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
WTC11_00027756	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	20.9057408383439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	32615017	True	NA	6	True	ATTAAA	-15	NA	32615538	32636181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
WTC11_00027762	chr15	+	1244	5	ISM	ENSG00000166922.9	ENST00000413748.6	1235	6	-54	4795	-54	-5	5prime_fragment	FALSE	canonical	3	90	junction_3	24.3053492054733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGCTGTCTGTT	32641609	False	NA	4	True	NA	NA	NA	32641621	32692303	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709
WTC11_00027763	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	22.6061938415117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
WTC11_00027765	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	65	junction_3	31.891064579283	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
WTC11_00027767	chr15	+	581	5	FSM	ENSG00000198838.14	ENST00000560791.2	581	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTATACTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	33852878	33857815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_33853088_33853554_33853683_33854388_33854450_33854765_33854913_33857779
WTC11_00027768	chr15	+	5680	1	FSM	ENSG00000182405.6	ENST00000397766.4	6604	1	12	912	12	-912	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACCCTCCCGAGTAGCT	34101922	True	NA	NA	False	NA	NA	NA	34102094	34107774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34102100_34107800
WTC11_00027769	chr15	+	907	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	-55	0	-55	0	multi-exon	FALSE	canonical	3	200	junction_3	570.579237851034	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	NA	False	NA	13	True	AATAAA	-22	NA	34224957	34230147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
WTC11_00027770	chr15	+	1038	5	FSM	ENSG00000128463.13	ENST00000267750.9	1019	5	-19	0	-16	0	multi-exon	FALSE	canonical	3	1234	junction_3	101.87983117379	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	NA	False	NA	22	True	AATAAA	-31	NA	34224996	34230156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34228428_34228590_34229752
WTC11_00027771	chr15	+	1174	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	-177	9	-153	0	multi-exon	FALSE	canonical	3	75	junction_2	548.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	NA	False	NA	13	True	AATAAA	-22	NA	34224859	34230147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
WTC11_00027773	chr15	+	336	1	FSM	ENSG00000231409.3	ENST00000491307.1	315	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCATCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34943058	34943394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34943100_34943400
WTC11_00027774	chr15	+	268	1	FSM	ENSG00000259665.1	ENST00000558497.1	370	1	-216	318	-216	-318	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGAGGAAAGCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	35080927	35081195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35080900_35081200
WTC11_00027775	chr15	+	2905	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	-33	0	-33	0	multi-exon	FALSE	canonical	3	82	junction_7	12.0847010720166	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36579568	False	NA	NA	False	AATAAA	-16	NA	36579592	36810244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
WTC11_00027776	chr15	+	1257	11	FSM	ENSG00000186073.14	ENST00000570265.6	1250	11	-8	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_10	31.3725995097633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGTAACAAACATTTC	36578367	True	NA	NA	False	AATAAA	-18	NA	36579625	36747240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36746934
WTC11_00027777	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6940188070628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578585	False	NA	NA	False	AATAAA	-16	NA	36579843	36810244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
WTC11_00027778	chr15	+	315	1	FSM	ENSG00000261635.2	ENST00000561804.2	725	1	65	345	65	-345	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCTTGTAAGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	36613538	36613853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36613500_36613900
WTC11_00027779	chr15	+	917	1	FSM	ENSG00000261315.2	ENST00000566382.2	2177	1	711	549	711	-549	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCATGTGCAGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	36617799	36618716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36617800_36618700
WTC11_00027780	chr15	+	3464	5	FSM	ENSG00000166068.13	ENST00000561205.1	1177	5	-855	-1432	-843	1432	multi-exon	FALSE	canonical	3	22	junction_4	95.7140924838135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTGAAGCTGCTAA	NA	False	NA	-9	True	AATAAA	-3	NA	38251992	38327795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38325947
WTC11_00027781	chr15	+	9325	8	NNC	ENSG00000166068.13	novel	7270	7	NA	NA	-500	1250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.306720670202	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAACCTGTCTTTCATT	38249811	True	NA	9	True	AATAAA	-18	NA	38252335	38358499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38335243_38335549_38339736_38339896_38349421_38349524_38351013
WTC11_00027782	chr15	+	8108	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	-843	5	-843	-5	multi-exon	FALSE	canonical	3	229	junction_6	6.50640709864771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTGAAATAGTGTTT	NA	False	NA	5	True	AATAAA	-14	NA	38251992	38357244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
WTC11_00027783	chr15	+	3097	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	-16	30	11	-30	multi-exon	FALSE	canonical	1	4	junction_6	4.25897744639355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGGCAACAGAGCAAG	38445299	True	NA	NA	False	NA	NA	NA	38454137	38483635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
WTC11_00027784	chr15	+	1961	1	ISM	ENSG00000171262.11	ENST00000397609.6	4388	8	30328	1295	19109	-1295	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGCCTCACTTCTTT	NA	False	NA	26	True	AGTAAA	-42	NA	38484454	38486415	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_38484500_38486400
WTC11_00027785	chr15	+	7192	22	FSM	ENSG00000137801.11	ENST00000260356.6	7789	22	2	595	2	-595	multi-exon	FALSE	canonical	2	22	junction_7	9.69769825648968	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAATTCATTCCTTAAA	39578998	True	NA	70	True	NA	NA	NA	39581080	39598871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39581229_39581828_39581925_39582192_39582753_39583616_39583693_39583987_39584188_39584299_39584423_39585469_39585564_39587346_39587521_39588041_39588219_39588525_39588700_39588958_39589087_39589201_39589355_39589804_39590024_39590515_39590624_39591190_39591351_39591504_39591624_39592567_39592803_39592999_39593228_39593396_39593669_39594098_39594197_39594300_39594441_39595361
WTC11_00027789	chr15	+	3236	1	FSM	ENSG00000261136.1	ENST00000564211.1	3047	1	-88	-101	-88	101	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTCACGTGTTTATTT	NA	False	NA	NA	False	CATAAA	-37	NA	39782482	39785718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39782500_39785700
WTC11_00027790	chr15	+	5554	39	FSM	ENSG00000128829.12	ENST00000263791.10	5538	39	-16	0	-16	0	multi-exon	TRUE	canonical	3	324	junction_20	54.5516096585929	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	39928531	True	NA	13	True	AATAAA	-13	NA	39934098	40035591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39985804_39985889_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
WTC11_00027791	chr15	+	3548	11	FSM	ENSG00000128829.12	ENST00000559624.5	3548	11	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_4	45.4008810487198	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTCTGTTTTGTGTTT	39928578	True	NA	NA	False	NA	NA	NA	39934145	39975429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591
WTC11_00027792	chr15	+	687	4	FSM	ENSG00000128829.12	ENST00000560648.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	224.206749824056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATTGATTTCTACAGA	39928608	True	NA	NA	False	AATAAA	-20	NA	39934175	39946895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39946588
WTC11_00027796	chr15	+	588	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	25	0	-6	0	multi-exon	FALSE	canonical	2	11	junction_2	11.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	40038782	True	NA	NA	False	TATAAA	-26	NA	40039284	40057003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40056688
WTC11_00027797	chr15	+	604	5	FSM	ENSG00000156970.13	ENST00000558715.5	580	5	-24	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	456.523274324541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAAGAGCTGTAGAAG	40139746	True	NA	NA	False	NA	NA	NA	40161042	40170599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40165052_40165197_40166358_40166483_40170061_40170122_40170536
WTC11_00027798	chr15	+	546	5	FSM	ENSG00000156970.13	ENST00000559414.5	526	5	-20	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	385.925510947385	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATATCTCATGGGCAG	40139726	True	NA	NA	False	NA	NA	NA	40161022	40176550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170572_40176476
WTC11_00027799	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_5	71.8729509230014	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139772	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
WTC11_00027804	chr15	+	3898	11	FSM	ENSG00000137843.12	ENST00000560346.5	4020	11	120	2	120	-2	multi-exon	FALSE	canonical	1	3	junction_1	20.3577994881569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGGGCTTCCTGTGTC	40239488	False	NA	6	True	ATTAAA	-14	NA	40239539	40277483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
WTC11_00027806	chr15	+	3704	11	NNC	ENSG00000137843.12	novel	2540	10	NA	NA	20	7377	intron_retention	FALSE	non_canonical	0	0	junction_10	17.3323397151106	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTAATTCCAGACGGGT	40251848	True	NA	NA	False	NA	NA	NA	40252570	40284864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926_40277484_40284833
WTC11_00027809	chr15	+	3024	1	FSM	ENSG00000259330.3	ENST00000638170.2	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTAAGTTGATCATT	40323196	True	NA	24	True	AATACA	-20	NA	40323691	40326715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40323700_40326700
WTC11_00027810	chr15	+	12527	8	FSM	ENSG00000140323.6	ENST00000267889.5	12612	8	85	0	85	0	multi-exon	FALSE	canonical	1	1	junction_5	2.49079939630896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAATTTAAAAGTGTTT	40358210	True	NA	NA	False	NA	NA	NA	40358303	40378621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40358441_40363624_40363955_40364225_40364256_40364420_40364545_40364837_40364954_40365146_40365275_40365627_40365726_40367057
WTC11_00027811	chr15	+	721	2	FSM	ENSG00000128944.14	ENST00000559604.1	535	2	201	-387	-17	387	multi-exon	FALSE	canonical	3	469	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAAACTTGGGCGAAGA	40375987	True	NA	NA	False	NA	NA	NA	40382921	40383825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227
WTC11_00027812	chr15	+	1682	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	217	0	-1	0	multi-exon	FALSE	canonical	1	3	junction_8	160.069467341526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	40376003	True	NA	19	True	AATAAA	-26	NA	40382937	40394154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
WTC11_00027813	chr15	+	1519	9	FSM	ENSG00000128944.14	ENST00000608100.5	1495	9	-24	0	-22	0	multi-exon	FALSE	canonical	3	445	junction_3	29.567718883945	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTGTAACATTGAGGA	NA	False	NA	-10	True	AATAAA	-16	NA	40382916	40394246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
WTC11_00027814	chr15	+	668	7	FSM	ENSG00000128944.14	ENST00000557920.1	651	7	-17	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	216.804571497518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGACAGCACACAGCT	40376044	True	NA	NA	False	NA	NA	NA	40382978	40389929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389165_40389292_40389505_40389612_40389835
WTC11_00027815	chr15	+	686	5	FSM	ENSG00000128928.10	ENST00000610693.5	668	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	6	junction_2	204.977285326936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGCCACTCTCAACT	40397941	True	NA	NA	False	NA	NA	NA	40405776	40411351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40405972_40407635_40407813_40407938_40407991_40410627_40410798_40411259
WTC11_00027816	chr15	+	4368	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	40397941	True	NA	NA	False	AATAAA	-36	NA	40405776	40421308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
WTC11_00027820	chr15	+	4706	7	FSM	ENSG00000140320.12	ENST00000561234.5	4698	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	20	junction_2	33.728079300982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATCGTTTCCTGTGT	40439676	False	NA	20	True	AATAAA	-24	NA	40439712	40468229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
WTC11_00027821	chr15	+	4673	7	NIC	ENSG00000140320.12	novel	4432	6	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	25.5973088863307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	40438086	True	NA	19	True	AATAAA	-23	NA	40439738	40468228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
WTC11_00027822	chr15	+	4783	7	FSM	ENSG00000140320.12	ENST00000416165.6	4779	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	43	junction_5	26.7669987526099	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	40439197	True	NA	27	True	AATAAA	-31	NA	40440948	40468236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
WTC11_00027824	chr15	+	2182	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	-7	0	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	40470501	True	NA	17	True	AATAAA	-17	NA	40470976	40473158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40471000_40473200
WTC11_00027825	chr15	+	2479	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	-9	-105	-9	105	multi-exon	FALSE	canonical	3	199	junction_1	6	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCACGATTTGTCTAT	NA	False	NA	-96	True	NA	NA	NA	40569289	40575054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40569944_40571603_40571901_40573526
WTC11_00027826	chr15	+	1582	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	-24	0	9	0	multi-exon	FALSE	canonical	2	23	junction_1	94	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	40565785	True	NA	-75	True	NA	NA	NA	40569307	40574358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40569761_40571603_40571901_40573526
WTC11_00027827	chr15	+	631	1	FSM	ENSG00000166133.18	ENST00000616318.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCTCGCTTTCATTTGG	40565914	False	NA	22	True	ATTAAA	-18	NA	40569436	40570067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40569400_40570100
WTC11_00027828	chr15	+	9266	26	FSM	ENSG00000137812.21	ENST00000399668.7	9266	26	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.52477623756137	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGAGTAGTGTTTC	40591594	True	NA	16	True	ATTAAA	-20	NA	40594248	40664342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639_40625641_40628069_40628209_40628610_40628679_40629272_40629372_40640911_40641028_40644996_40645088_40645655_40645773_40646986_40647075_40650300_40650379_40650543_40650584_40651470_40651573_40652004_40652106_40654908_40654978_40657041_40657152_40657354_40657474_40659338_40659462_40662073
WTC11_00027829	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	33.6301598913979	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691125	True	NA	3	True	AATAAA	-15	NA	40695173	40732340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
WTC11_00027830	chr15	+	2183	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	176	-748	118	0	multi-exon	FALSE	canonical	3	39	junction_8	94.4202705990615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691256	False	NA	3	True	AATAAA	-15	NA	40695304	40732340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
WTC11_00027831	chr15	+	1558	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	-13	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	100.622360213821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	40691125	True	NA	-18	True	ACTAAA	-39	NA	40695173	40731557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
WTC11_00027832	chr15	+	658	6	FSM	ENSG00000051180.17	ENST00000531277.2	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	130.072902635407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTGGGATAGGGAC	40698745	False	NA	NA	False	NA	NA	NA	40698756	40729634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40698846_40701063_40701202_40709024_40709117_40718804_40718900_40728710_40728825_40729504
WTC11_00027833	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	17.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40757578	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40764217_40765826_40765922_40767225
WTC11_00027834	chr15	+	341	2	FSM	ENSG00000137880.6	ENST00000561160.1	572	2	0	231	0	-231	multi-exon	FALSE	canonical	3	537	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGAGGAGTTGGTCCCAT	40757614	True	NA	NA	False	GGGGCT	-7	NA	40764103	40766054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40764217_40765826
WTC11_00027835	chr15	+	788	2	FSM	ENSG00000137880.6	ENST00000558467.1	785	2	-3	0	-3	0	multi-exon	FALSE	canonical	3	572	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40765599	False	NA	16	True	AATAAA	-16	NA	40765616	40767708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40765922_40767225
WTC11_00027836	chr15	+	2787	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	-12	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3922687537472	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	40806798	True	NA	NA	False	TATAAA	-22	NA	40807076	40815084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
WTC11_00027837	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.8442328730529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	40807311	False	NA	27	True	AATAAA	-19	NA	40807589	40814569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
WTC11_00027838	chr15	+	1578	11	NNC	ENSG00000166140.17	novel	2775	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.7466554809827	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	40806617	True	NA	27	True	AATAAA	-19	NA	40807756	40814569	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812712_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
WTC11_00027843	chr15	+	3570	11	FSM	ENSG00000166145.15	ENST00000344051.8	3056	11	-431	-83	-431	83	multi-exon	TRUE	canonical	3	288	junction_5	201.837781398825	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAGGAAGCACTATTTA	NA	False	NA	NA	False	NA	NA	NA	40843586	40858290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
WTC11_00027845	chr15	+	2978	11	FSM	ENSG00000166145.15	ENST00000562057.6	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	145.689258354897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	40841683	True	NA	NA	False	NA	NA	NA	40844047	40858207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
WTC11_00027847	chr15	+	3076	11	NIC	ENSG00000166145.15	novel	1417	9	NA	NA	77	164	combination_of_known_junctions	FALSE	canonical	3	179	junction_1	252.746038544623	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCGCATTTTACAGGTGAA	40844118	False	NA	NA	False	AATACA	-4	NA	40844253	40858371	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
WTC11_00027851	chr15	+	283	1	FSM	ENSG00000274798.1	ENST00000612411.1	163	1	-123	3	-123	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTATGCATATGTTTG	40874227	False	NA	NA	False	ATTAAA	-22	NA	40874309	40874592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40874300_40874600
WTC11_00027852	chr15	+	3889	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	134	junction_3	11.5839328382031	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	40891788	True	NA	15	True	ATTAAA	-15	NA	40894435	40903975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
WTC11_00027854	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	40951379	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40953815_40954227_40954264_40955372
WTC11_00027857	chr15	+	3333	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	-129	-3	-1	3	multi-exon	FALSE	canonical	3	53	junction_4	8.05536398239638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTCCATTTTACAAGA	41231030	False	NA	NA	False	AATAAA	-24	NA	41231138	41281890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
WTC11_00027858	chr15	+	1351	1	ISM	ENSG00000187446.12	ENST00000334660.10	3201	7	49266	3	23624	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTTTTGTCCATTTT	41280514	False	NA	NA	False	AATAAA	-18	NA	41280533	41281884	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_41280500_41281900
WTC11_00027860	chr15	+	1561	4	FSM	ENSG00000247556.6	ENST00000559368.5	642	4	-42	-877	-24	-7	multi-exon	FALSE	canonical	1	1	junction_3	345.071973168884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACAATCTTTGTATG	41259263	True	NA	9	True	AATAAA	-11	NA	41283965	41289148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287961
WTC11_00027861	chr15	+	8411	5	NNC	ENSG00000247556.6	novel	8829	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	31	junction_4	290.384228221851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259263	True	NA	15	True	AATAAA	-28	NA	41283965	41306534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298777_41299233
WTC11_00027862	chr15	+	10105	4	FSM	ENSG00000247556.6	ENST00000561275.5	821	4	-40	-9244	-24	0	multi-exon	FALSE	canonical	2	14	junction_3	338.943784260589	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259263	True	NA	15	True	AATAAA	-28	NA	41283965	41306534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41296803
WTC11_00027863	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	59.4194132137525	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259302	True	NA	15	True	AATAAA	-28	NA	41284004	41306534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
WTC11_00027864	chr15	+	1385	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	-1	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	355.502812928393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	41259328	True	NA	NA	False	AATAAA	-18	NA	41284030	41309737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
WTC11_00027865	chr15	+	2409	11	FSM	ENSG00000137804.14	ENST00000260359.10	2409	11	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_3	447.5461987326	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	NA	False	NA	21	True	AATAAA	-22	NA	41332693	41381050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027867	chr15	+	1317	9	FSM	ENSG00000137804.14	ENST00000450592.6	1301	9	-16	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	723.992910445261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACTTTAGTCACGAGAT	41318843	True	NA	NA	False	NA	NA	NA	41332854	41380263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41377195_41377305_41380092
WTC11_00027868	chr15	+	2273	11	FSM	ENSG00000137804.14	ENST00000559596.6	2263	11	-10	0	0	0	multi-exon	FALSE	canonical	3	965	junction_6	335.410211532088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	41318859	True	NA	17	True	AATAAA	-18	NA	41332870	41381046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027869	chr15	+	2290	11	FSM	ENSG00000137804.14	ENST00000414849.6	2274	11	-16	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_6	318.236154451376	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318843	True	NA	21	True	AATAAA	-22	NA	41332854	41381050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027870	chr15	+	2271	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	-15	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	561.82278344688	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318859	True	NA	21	True	AATAAA	-22	NA	41332870	41381050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027871	chr15	+	2144	10	NIC	ENSG00000137804.14	novel	2263	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_8	601.85043874478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	41318871	True	NA	17	True	AATAAA	-18	NA	41332882	41381046	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41377195_41377305_41380092
WTC11_00027873	chr15	+	2246	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	-14	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	570.235600431962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318887	True	NA	21	True	AATAAA	-22	NA	41332898	41381050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027874	chr15	+	2215	11	NIC	ENSG00000137804.14	novel	2263	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	649	junction_3	435.875624461841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	41318869	True	NA	17	True	AATAAA	-18	NA	41332880	41381046	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00027876	chr15	+	5029	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	-1	2	-1	-2	multi-exon	FALSE	canonical	1	192	junction_16	95.4835807186304	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGATTGAGTCTAAGGA	41412652	True	NA	NA	False	AATAAA	-23	NA	41417093	41483561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
WTC11_00027879	chr15	+	1646	7	FSM	ENSG00000137825.11	ENST00000260386.7	1825	7	145	34	145	-34	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCCTTCCTAATAAA	41494007	False	NA	-29	True	NA	NA	NA	41494018	41503517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41494417_41501462_41501560_41501634_41501852_41501996_41502202_41502401_41502504_41502787_41502860_41502962
WTC11_00027880	chr15	+	670	2	Fusion	ENSG00000092445.12_ENSG00000259838.1	novel	332	2	NA	NA	-88	241	multi-exon	FALSE	canonical	3	1375	junction_1	0	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACAGAGACAGAGA	NA	False	NA	NA	False	AATAAA	-28	NA	41556938	41557676	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_41557175_41557242
WTC11_00027881	chr15	+	332	2	FSM	ENSG00000259838.1	ENST00000566760.1	332	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTATAATAAACT	NA	False	NA	NA	False	NA	NA	NA	41557026	41557435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41557169_41557245
WTC11_00027882	chr15	+	8032	19	FSM	ENSG00000092445.12	ENST00000263798.8	8032	19	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_4	29.311018448173	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGGTACATTTTTTT	41557312	True	NA	6	True	TATAAA	-20	NA	41559211	41583589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41559382_41561126_41561311_41561538_41561640_41562547_41562719_41564183_41564271_41565025_41565142_41567359_41567538_41568216_41568363_41568877_41569023_41570026_41570157_41570239_41570341_41570603_41570700_41571037_41571119_41571594_41571688_41572442_41572565_41573001_41573112_41573307_41573468_41573678_41573816_41577885
WTC11_00027883	chr15	+	1399	2	FSM	ENSG00000092445.12	ENST00000560992.1	1384	2	-15	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAGGAGCCTGAAAAA	41557312	True	NA	NA	False	NA	NA	NA	41559211	41562355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41559382_41561126
WTC11_00027884	chr15	+	585	3	FSM	ENSG00000092445.12	ENST00000560227.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	23.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCTTGGAGTGGGAAG	41564760	False	NA	NA	False	NA	NA	NA	41564783	41568265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41565142_41567359_41567538_41568216
WTC11_00027885	chr15	+	7848	22	FSM	ENSG00000174197.18	ENST00000570161.6	7888	22	40	0	-2	0	multi-exon	TRUE	canonical	3	3	junction_1	13.9704904414485	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAAAAGAAAAAAGAAG	41620806	True	NA	NA	False	AAAACA	-15	NA	41621531	41762194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41621590_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128
WTC11_00027886	chr15	+	15046	24	NIC	ENSG00000174197.18	novel	12046	24	NA	NA	-46	-12	intron_retention	FALSE	canonical	1	8	junction_13	15.1996169487104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTTTCATAATATTT	41660300	False	NA	NA	False	AATAAA	-14	NA	41660350	41773069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736369_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
WTC11_00027887	chr15	+	12055	24	FSM	ENSG00000174197.18	ENST00000219905.13	12046	24	-8	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_13	14.6860014619841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTGTTGGGAGGTTT	41658098	True	NA	12	True	AATAAA	-23	NA	41660396	41769941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41740052_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
WTC11_00027888	chr15	+	14556	23	FSM	ENSG00000174197.18	ENST00000566586.6	14568	23	0	12	0	-12	multi-exon	FALSE	canonical	2	4	junction_14	16.4460048151569	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTTTCATAATATTT	41658098	True	NA	NA	False	AATAAA	-14	NA	41660396	41773069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41740052_41740204_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
WTC11_00027890	chr15	+	7198	31	FSM	ENSG00000137802.14	ENST00000457542.7	7182	31	-16	0	-16	0	multi-exon	FALSE	canonical	3	15	junction_7	4.08805849055786	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGATGCCGGCCAGTG	41774005	True	NA	6	True	AATAAA	-17	NA	41774467	41827855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41774611_41775166_41775390_41799822_41799915_41810882_41810946_41811177_41811236_41811956_41812128_41812515_41812654_41812918_41813102_41813620_41813782_41814549_41814740_41815258_41815406_41815623_41815800_41816558_41816651_41816909_41817036_41817387_41817459_41817613_41817736_41818008_41818085_41818193_41818306_41818518_41818583_41818822_41818958_41819245_41819380_41819594_41819651_41820831_41821069_41821583_41821751_41821964_41822111_41822224_41822423_41822592_41822678_41822938_41823223_41823446_41824062_41824483_41824570_41825208
WTC11_00027895	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	26.6664965980971	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	41825860	True	NA	15	True	AATAAA	-13	NA	41828091	41837581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
WTC11_00027898	chr15	+	7218	25	FSM	ENSG00000168970.22	ENST00000490848.5	7218	25	-3	3	-3	-3	multi-exon	TRUE	canonical	3	30	junction_15	33.736082521373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACCATCTGTTATTAC	41825860	True	NA	28	True	NA	NA	NA	41828091	41848152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842592_41843125_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
WTC11_00027901	chr15	+	1052	6	FSM	ENSG00000214013.10	ENST00000562859.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	15.7607106438764	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTGGTGTCTGAAGAA	42273257	False	NA	NA	False	NA	NA	NA	42273294	42292826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734
WTC11_00027902	chr15	+	1437	5	FSM	ENSG00000214013.10	ENST00000440615.6	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.4353490404331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAAACTAGATTT	42274227	False	NA	106	True	NA	NA	NA	42274241	42284389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
WTC11_00027903	chr15	+	3672	18	ISM	ENSG00000214013.10	ENST00000318010.13	5553	24	33387	0	-19713	0	3prime_fragment	FALSE	canonical	2	11	junction_8	7.79495001104821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTGATTTGCTTTT	NA	False	NA	16	True	ATTAAA	-19	NA	42306587	42353666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362_42327443_42329305_42329450_42330575_42330673_42338388_42338491_42339668_42339913_42340689_42340755_42343077_42343155_42345757_42345833_42348102_42348217_42349382_42349496_42351328_42351433_42352029
WTC11_00027904	chr15	+	2184	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	296	0	-32	0	multi-exon	TRUE	canonical	3	21	junction_5	289.681290386521	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	42483553	True	NA	24	True	ATTAAA	-15	NA	42495601	42533059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
WTC11_00027905	chr15	+	552	2	FSM	ENSG00000092531.10	ENST00000563451.1	595	2	-7	50	0	-50	multi-exon	FALSE	canonical	3	759	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACACATTTTCTCTTAAG	42483595	True	NA	NA	False	TTTAAA	-34	NA	42495643	42512314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832
WTC11_00027906	chr15	+	229	4	FSM	ENSG00000092531.10	ENST00000627440.2	210	4	-19	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	363.386234680891	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTTAATTATTTT	42483585	True	NA	NA	False	NA	NA	NA	42495633	42513209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513173
WTC11_00027907	chr15	+	857	6	FSM	ENSG00000092531.10	ENST00000567094.5	834	6	-23	0	-15	0	multi-exon	FALSE	canonical	3	17	junction_5	310.590663092116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGGTTCTTGAGTCA	42483570	True	NA	NA	False	NA	NA	NA	42495618	42522095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42521613
WTC11_00027908	chr15	+	567	7	FSM	ENSG00000092531.10	ENST00000568331.5	557	7	-10	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	362.761629723983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGCAACCAACAACGGG	42483585	True	NA	NA	False	NA	NA	NA	42495633	42528373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42521613_42521709_42528261
WTC11_00027909	chr15	+	775	6	FSM	ENSG00000092531.10	ENST00000564153.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_5	304.999672130971	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTTATTTTT	42483585	True	NA	NA	False	NA	NA	NA	42495633	42531827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42531412
WTC11_00027910	chr15	+	2325	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	700	junction_5	38.4330852367635	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	42483570	True	NA	23	True	ATTAAA	-14	NA	42495618	42533058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
WTC11_00027911	chr15	+	845	7	FSM	ENSG00000092531.10	ENST00000566035.5	846	7	0	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_3	286.892207786982	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGCTTTTTATTGCCA	42483629	True	NA	4	True	AATAAA	-17	NA	42495677	42529819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513173_42513448_42515236_42515355_42528261_42528421_42529674
WTC11_00027912	chr15	+	1018	6	FSM	ENSG00000092531.10	ENST00000568514.5	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_3	42.6361349092527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGCCAGAGCAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	42511832	42531444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42511904_42512954_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
WTC11_00027913	chr15	+	862	3	FSM	ENSG00000092531.10	ENST00000563333.1	862	3	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTCTGCCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	42527942	42531651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42528421_42529674_42529820_42531412
WTC11_00027914	chr15	+	612	6	FSM	ENSG00000137814.12	ENST00000567640.5	592	6	-20	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_2	59.194594347795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACTGAGACAGAAGAACT	42544315	True	NA	NA	False	NA	NA	NA	42548807	42566636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42558197_42558291_42560781_42560871_42561269_42561403_42563748_42563858_42566606
WTC11_00027915	chr15	+	579	6	FSM	ENSG00000137814.12	ENST00000562398.5	575	6	-4	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	57.676338302635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAAATATTCCTCATTT	42544341	True	NA	NA	False	NA	NA	NA	42548833	42563815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561274_42561403_42563748
WTC11_00027917	chr15	+	3952	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	-35	-1064	-25	0	multi-exon	TRUE	canonical	3	22	junction_2	51.581391993625	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544310	True	NA	70	True	AATAAA	-21	NA	42548802	42569994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
WTC11_00027918	chr15	+	3931	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	-10	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	14.505171491575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544335	True	NA	70	True	AATAAA	-21	NA	42548827	42569994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
WTC11_00027920	chr15	+	3743	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	95	-2136	56	0	multi-exon	FALSE	canonical	3	35	junction_1	41.8173110087198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544430	True	NA	70	True	AATAAA	-21	NA	42548922	42569994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
WTC11_00027921	chr15	+	3925	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	65	-3364	56	0	multi-exon	FALSE	canonical	3	22	junction_3	48.7456550770311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544430	True	NA	70	True	AATAAA	-21	NA	42548922	42569994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
WTC11_00027922	chr15	+	265	1	FSM	ENSG00000260490.2	ENST00000569826.2	507	1	86	156	86	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGAGAGAGCTGATGAC	NA	False	NA	NA	False	NA	NA	NA	42572012	42572277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42572000_42572300
WTC11_00027923	chr15	+	395	1	FSM	ENSG00000274403.1	ENST00000617465.1	629	1	-158	392	-158	-392	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATACAGAAATCCTCT	NA	False	NA	NA	False	NA	NA	NA	42726424	42726819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42726400_42726800
WTC11_00027924	chr15	+	2707	14	FSM	ENSG00000137842.7	ENST00000260403.7	2707	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	4.2994426499945	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGAGCCTGAGGCTTG	43133251	True	NA	NA	False	AATAAA	-23	NA	43133585	43185144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43133983_43134256_43134369_43135511_43135650_43138573_43138620_43146492_43146635_43148754_43148880_43149028_43149152_43151789_43151946_43154671_43154832_43160680_43160795_43169592_43169678_43178606_43178712_43181180_43181300_43184259
WTC11_00027926	chr15	+	4181	23	Fusion	ENSG00000137842.7_ENSG00000166946.14	novel	2707	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_3	106.595638584743	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	43133803	False	NA	NA	False	AATAAA	-6	NA	43133841	43195180	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_43133983_43134256_43134369_43135511_43135650_43146492_43146635_43148754_43148880_43149028_43149152_43151789_43151946_43154671_43154832_43160680_43160795_43169592_43169678_43178606_43178712_43181180_43181300_43184259_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
WTC11_00027932	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	12.6130884401878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	43182466	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
WTC11_00027935	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	68.182398800371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	43182502	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
WTC11_00027939	chr15	+	4378	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	-274	164	-274	-150	multi-exon	TRUE	canonical	3	32	junction_2	8.31497978884428	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGGATCTATTGCAG	43330294	False	NA	NA	False	AGTAAA	-20	NA	43330397	43354405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
WTC11_00027940	chr15	+	3534	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	-20	0	-18	0	multi-exon	FALSE	canonical	3	9	junction_9	12.6065705025082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	43329434	True	NA	24	True	AATAAA	-14	NA	43330653	43353898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
WTC11_00027945	chr15	+	2617	18	FSM	ENSG00000137822.13	ENST00000260383.11	2617	18	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_12	16.0468604438316	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTATGGTTCATAT	43368684	True	NA	NA	False	AATATA	-13	NA	43371100	43405573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398037_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
WTC11_00027946	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	10.6156507818641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	43368684	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
WTC11_00027947	chr15	+	2877	7	FSM	ENSG00000137822.13	ENST00000563963.1	4379	7	1502	0	1502	0	multi-exon	FALSE	canonical	3	63	junction_2	12.6710518724988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTCTACCTTTTCTCC	NA	False	NA	8	True	AATAAA	-18	NA	43395582	43405323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43403800_43404412_43404553_43405201
WTC11_00027948	chr15	+	10238	6	FSM	ENSG00000166963.13	ENST00000300231.6	10266	6	28	0	28	0	multi-exon	FALSE	canonical	1	1	junction_2	1.46969384566991	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	43517470	True	NA	4	True	AATAAA	-15	NA	43517635	43531611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43517701_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
WTC11_00027949	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	68.564649135769	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43593003	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
WTC11_00027950	chr15	+	1771	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	-192	0	-184	0	multi-exon	FALSE	canonical	3	213	junction_7	25.4506262201935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43593815	False	NA	20	True	AGTAAA	-20	NA	43593834	43599406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
WTC11_00027951	chr15	+	204	1	FSM	ENSG00000224677.1	ENST00000428073.1	158	1	-67	21	-67	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGTTTTTCGCCCCCT	NA	False	NA	NA	False	NA	NA	NA	43649055	43649259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43649100_43649300
WTC11_00027952	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	67.3126114061918	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43692885	43699222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
WTC11_00027953	chr15	+	938	4	FSM	ENSG00000223572.10	ENST00000457648.1	938	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	121.601352331662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGATCTAGATGCCAGTAA	43693009	False	NA	NA	False	AATGAA	-8	NA	43693039	43695280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43693104_43693876_43694200_43694526_43695003_43695205
WTC11_00027954	chr15	+	1771	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	-192	0	-192	0	multi-exon	FALSE	canonical	3	204	junction_7	25.4432579478336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43693636	False	NA	20	True	AGTAAA	-20	NA	43693666	43699222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
WTC11_00027957	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7426	junction_3	389.321873047654	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	43671447	True	NA	17	True	AGTAAA	-19	NA	43746437	43773278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
WTC11_00027958	chr15	+	739	2	ISM	ENSG00000167004.14	ENST00000497349.2	1996	7	7131	-98	4848	0	3prime_fragment	FALSE	canonical	3	8168	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCCACCAGATTGAG	43770185	False	NA	25	True	AATAAA	-21	NA	43770282	43771545	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_43770581_43771104
WTC11_00027959	chr15	+	3402	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	13	-1484	13	0	multi-exon	FALSE	canonical	2	6	junction_1	5727.25878475035	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTAGGATGTGTGT	43777076	False	NA	29	True	AATAAA	-36	NA	43777112	43796079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
WTC11_00027960	chr15	+	1412	2	FSM	ENSG00000140264.21	ENST00000486144.1	1030	2	-357	-25	131	0	multi-exon	FALSE	canonical	3	9647	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	NA	False	NA	-1	True	NA	NA	NA	43791972	43793975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974
WTC11_00027961	chr15	+	2894	3	FSM	ENSG00000140264.21	ENST00000249786.9	2543	3	-347	-4	131	4	multi-exon	FALSE	canonical	3	9647	junction_1	1590.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAGGATGTGTGTGTGT	NA	False	NA	33	True	AATAAA	-40	NA	43791972	43796083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793709
WTC11_00027962	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	4624.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712903	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793686
WTC11_00027963	chr15	+	711	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	-21	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	6382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712903	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792612_43792974_43793084_43793709
WTC11_00027965	chr15	+	3261	6	FSM	ENSG00000140264.21	ENST00000409617.6	3254	6	-7	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	3092.13198942089	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	43712903	True	NA	NA	False	AATAAA	-18	NA	43792346	43804427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43800494_43800785_43801131_43801188_43801517_43801570_43801710
WTC11_00027967	chr15	+	7122	5	FSM	ENSG00000242028.8	ENST00000406925.6	7122	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1614.36123203575	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	43796094	False	NA	NA	False	AATAAA	-18	NA	43796141	43804427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43800149_43800494_43800785_43801131_43801188_43801517_43801570_43801710
WTC11_00027972	chr15	+	3933	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	-22	21	0	-21	multi-exon	FALSE	canonical	3	86	junction_8	16.0147501454822	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGTTAGCAAATTCT	43825404	True	NA	-17	True	NA	NA	NA	43826979	43868391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
WTC11_00027973	chr15	+	3971	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	3	0	3	0	multi-exon	TRUE	canonical	3	105	junction_8	24.9077309630644	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	44288667	True	NA	10	True	AATAAA	-18	NA	44288721	44415758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
WTC11_00027974	chr15	+	3788	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	-24	0	-2	0	multi-exon	FALSE	canonical	3	62	junction_8	36.8169033868955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	44288663	False	NA	9	True	AATAAA	-17	NA	44288735	44415757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
WTC11_00027977	chr15	+	6477	13	NIC	ENSG00000137770.14	novel	6433	13	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	83.115882958674	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	44427385	False	NA	15	True	AATAAA	-16	NA	44427504	44529038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_44427693_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
WTC11_00027978	chr15	+	3110	13	NNC	ENSG00000137770.14	novel	6433	13	NA	NA	-90	-326	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	87.8298149200423	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGAGTATGTCAATTAA	44427412	False	NA	7	True	ATTAAA	-17	NA	44427531	44525621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_44427773_44458990_44459201_44484223_44484363_44486553_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
WTC11_00027979	chr15	+	591	5	FSM	ENSG00000137770.14	ENST00000558791.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	132.504716897173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGGCTGTGGAAGCT	44420792	True	NA	NA	False	NA	NA	NA	44427621	44490804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44427693_44458990_44459201_44484223_44484363_44486550_44486701_44490783
WTC11_00027980	chr15	+	6865	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	-432	0	-425	0	multi-exon	FALSE	canonical	3	287	junction_1	28.7793328623163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	44427077	True	NA	15	True	AATAAA	-16	NA	44427196	44529038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
WTC11_00027985	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	225.442320782944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	44525268	True	NA	-63	True	TATAAA	-33	NA	44537124	44561999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
WTC11_00027986	chr15	+	2501	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	-22	0	0	0	multi-exon	FALSE	canonical	3	494	junction_6	63.5783302834594	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	44525268	True	NA	5	True	ATTAAA	-18	NA	44537124	44562803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
WTC11_00027987	chr15	+	434	3	FSM	ENSG00000104131.13	ENST00000558053.1	463	3	0	29	0	-29	multi-exon	FALSE	canonical	3	589	junction_2	59.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTCAAGGATA	44551414	True	NA	NA	False	NA	NA	NA	44551437	44557722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44551523_44554552_44554668_44557488
WTC11_00027988	chr15	+	947	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	-4	0	0	0	multi-exon	FALSE	canonical	3	2883	junction_2	77.7988860245869	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	44693969	True	NA	33	True	AATAAA	-14	NA	44711512	44718145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
WTC11_00027989	chr15	+	3239	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	-49	0	-36	0	multi-exon	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	NA	False	NA	1	True	AATAAA	-12	NA	44728951	44734000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44729553_44731362
WTC11_00027990	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	54.9907662703476	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	45014711	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
WTC11_00027991	chr15	+	7068	2	FSM	ENSG00000140263.15	ENST00000558574.2	7052	2	-3	-13	-3	0	multi-exon	FALSE	canonical	3	357	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	45069180	False	NA	NA	False	AATAAA	-27	NA	45069191	45077185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45072439_45073364
WTC11_00027993	chr15	+	2565	8	FSM	ENSG00000171763.20	ENST00000305560.11	2561	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_2	12.9662041083577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGTGTGTGTTGAT	45401651	True	NA	6	True	AATAAA	-18	NA	45402331	45421415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415780_45417268_45417400_45418556_45418683_45421042
WTC11_00027994	chr15	+	2469	8	FSM	ENSG00000171763.20	ENST00000531970.5	2464	8	-5	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	24.4773948193605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAACT	45401689	True	NA	-82	True	AATAAA	-7	NA	45402369	45421327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415810_45417268_45417400_45418556_45418683_45421042
WTC11_00027995	chr15	+	543	3	FSM	ENSG00000104164.12	ENST00000566753.5	1996	3	-124	1577	-5	-1577	multi-exon	FALSE	canonical	1	2	junction_2	46	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGATCAAGTAGGCTTC	45587126	True	NA	NA	False	AATAAA	-44	NA	45587230	45597985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45587526_45592134_45592277_45597879
WTC11_00027998	chr15	+	3893	5	FSM	ENSG00000104164.12	ENST00000220531.9	3778	5	-115	0	28	0	multi-exon	FALSE	canonical	3	94	junction_1	14.148763196831	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	45587159	False	NA	7	True	AATAAA	-15	NA	45587263	45609708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45587526_45592134_45592277_45603099_45603188_45605427_45605515_45606394
WTC11_00028001	chr15	+	608	7	FSM	ENSG00000137872.17	ENST00000559196.1	734	7	22	104	22	-104	multi-exon	FALSE	canonical	2	3	junction_3	0.897527467855751	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACAGTGGCTGACTTCT	NA	False	NA	NA	False	NA	NA	NA	47759744	47762215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_47759908_47760303_47760416_47760977_47761039_47761157_47761221_47761329_47761432_47761660_47761752_47762199
WTC11_00028002	chr15	+	338	4	FSM	ENSG00000137872.17	ENST00000558431.1	595	4	47	210	47	-210	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTTTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	47765868	47767093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_47766010_47766104_47766183_47766615_47766678_47767036
WTC11_00028003	chr15	+	669	7	FSM	ENSG00000128951.14	ENST00000559416.5	635	7	-109	75	-25	0	multi-exon	TRUE	canonical	3	36	junction_1	720.40235671155	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGGAAAGAATTAAAATT	NA	False	NA	NA	False	NA	NA	NA	48330985	48342062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
WTC11_00028004	chr15	+	569	6	FSM	ENSG00000128951.14	ENST00000559935.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	986.794487216057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCTTTCTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	48331010	48341495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341458
WTC11_00028005	chr15	+	940	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	-412	241	-18	0	multi-exon	FALSE	canonical	3	55	junction_1	713.411152297343	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTTCCACTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	48330992	48342052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
WTC11_00028006	chr15	+	2165	7	FSM	ENSG00000128951.14	ENST00000331200.8	2141	7	-24	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	635.538725981527	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGAATTCTGTTTTG	48331377	False	NA	NA	False	AATAAA	-27	NA	48331404	48343373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331796_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
WTC11_00028007	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_4	124.589566176305	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	48332079	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
WTC11_00028008	chr15	+	465	4	FSM	ENSG00000128951.14	ENST00000559540.5	1441	4	0	976	0	-76	multi-exon	FALSE	canonical	3	1920	junction_3	86.5948420326908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTAATATTGACTCCT	48315088	True	NA	76	True	AATATA	-43	NA	48332209	48341419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288
WTC11_00028010	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	48854687	True	NA	7	True	AGTAAA	-20	NA	48878133	48880173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48878100_48880200
WTC11_00028012	chr15	+	870	7	FSM	ENSG00000156958.15	ENST00000559883.5	991	7	121	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	28.1331161129055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGAAGAAGGAACTGT	49155121	True	NA	NA	False	NA	NA	NA	49155776	49282067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986
WTC11_00028013	chr15	+	5315	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	-16	0	-10	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1656117720877	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	49155748	49331882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
WTC11_00028014	chr15	+	1575	8	NIC	ENSG00000156958.15	novel	1834	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	24.9440189551053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	49169837	True	NA	7	True	ATTAAA	-22	NA	49170227	49328514	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49292326_49292538_49319603_49319806_49327951
WTC11_00028015	chr15	+	647	1	FSM	ENSG00000275580.1	ENST00000617563.1	647	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTTTTCATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	49343607	49344254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49343600_49344300
WTC11_00028016	chr15	+	895	5	FSM	ENSG00000104047.15	ENST00000559223.5	794	5	-101	0	-93	0	multi-exon	TRUE	canonical	3	27	junction_2	188.719865144081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATTTATAGATAGCAC	49617278	True	NA	NA	False	NA	NA	NA	49620943	49634730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535
WTC11_00028017	chr15	+	11256	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	-3	2446	0	-2446	multi-exon	FALSE	canonical	3	373	junction_4	19.4470434770944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTGAGTGAACTAAAG	49617379	True	NA	NA	False	NA	NA	NA	49621044	49653786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
WTC11_00028018	chr15	+	612	3	FSM	ENSG00000104047.15	ENST00000561188.5	591	3	-21	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTTATTATTGTTAGA	49617382	True	NA	NA	False	GATAAA	-9	NA	49621047	49625521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621123_49623670_49623799_49625112
WTC11_00028019	chr15	+	1148	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	-17	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	164.503799348222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	49617382	True	NA	-25	True	NA	NA	NA	49621047	49643610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
WTC11_00028021	chr15	+	2391	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	-7	0	-7	0	multi-exon	TRUE	canonical	3	17	junction_3	7.24866952457782	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	50181709	True	NA	10	True	ATTAAA	-18	NA	50182188	50236385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
WTC11_00028022	chr15	+	1076	1	FSM	ENSG00000244879.9	ENST00000619314.1	1076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAACTTAATCTAG	50354071	True	NA	NA	False	AAGAAA	-43	NA	50354958	50356034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50355000_50356000
WTC11_00028023	chr15	+	2971	2	FSM	ENSG00000244879.9	ENST00000659570.2	3008	2	37	0	16	0	multi-exon	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACTCCGTCTCAAAAAAA	50354099	True	NA	NA	False	NA	NA	NA	50354986	50358291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50355766_50356099
WTC11_00028025	chr15	+	667	5	FSM	ENSG00000138592.14	ENST00000560297.5	652	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	42	junction_1	121.929026486723	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCGAAGAAGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	50424364	50449440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399
WTC11_00028026	chr15	+	15601	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	3425	0	-3425	multi-exon	FALSE	canonical	3	77	junction_1	60.6823617740024	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGATCTCCTGACCTCG	50418245	True	NA	NA	False	NA	NA	NA	50424381	50510994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00028027	chr15	+	1590	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	-22	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	88.9058317186238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	50418268	True	NA	-35	True	AAGAAA	-37	NA	50424404	50481682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
WTC11_00028029	chr15	+	15536	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	3329	0	-3327	multi-exon	FALSE	canonical	3	121	junction_1	54.2516961706832	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTACAATTCTTTCAG	50418268	True	NA	NA	False	NA	NA	NA	50424404	50511092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00028030	chr15	+	5417	19	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	1	1388	combination_of_known_junctions	FALSE	canonical	3	100	junction_11	61.842092820703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTAATGTTTATCAGT	50418291	True	NA	15	True	AATAAA	-22	NA	50424427	50501083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00028031	chr15	+	5802	21	NIC	ENSG00000138592.14	novel	19026	20	NA	NA	7	1390	intron_retention	FALSE	canonical	3	11	junction_1	81.7440364797335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAATGTTTATCAGTGA	50418297	True	NA	17	True	AATAAA	-24	NA	50424433	50501085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00028035	chr15	+	6745	21	FSM	ENSG00000081014.11	ENST00000261842.10	6743	21	-2	0	-2	0	multi-exon	FALSE	canonical	3	28	junction_1	6.01061560907034	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGGTCTATGTTC	50908597	False	NA	3	True	AATAAA	-17	NA	50908680	51005895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50908929_50912077_50912150_50915447_50915572_50923930_50924005_50925097_50925220_50929008_50929169_50930804_50930972_50934623_50934698_50941441_50941565_50941665_50941776_50948019_50948160_50949825_50949939_50950050_50950170_50958491_50958795_50968262_50968378_50984021_50984146_50993369_50993626_50997325_50997884_50999071_50999263_51001025_51001184_51002501
WTC11_00028037	chr15	+	3167	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	-7	0	4	0	multi-exon	TRUE	canonical	3	524	junction_5	37.2323506360302	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	51681472	False	NA	20	True	AATAAA	-16	NA	51681495	51721026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
WTC11_00028038	chr15	+	8235	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	-21	18	4	-18	multi-exon	FALSE	canonical	3	317	junction_7	31.3538152127466	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAATATTCTGTAAACT	51818737	True	NA	12	True	AATAAA	-4	NA	51829631	51915707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
WTC11_00028039	chr15	+	5496	6	FSM	ENSG00000069956.14	ENST00000681888.1	5338	6	-142	-16	-142	0	multi-exon	FALSE	canonical	3	11	junction_1	232.211455359119	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCCACTTGCAATC	NA	False	NA	6	True	AATAAA	-19	NA	52019066	52067375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52019391_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
WTC11_00028040	chr15	+	5482	6	FSM	ENSG00000069956.14	ENST00000261845.7	5330	6	-152	0	-142	0	multi-exon	FALSE	canonical	3	491	junction_1	60.4694964424213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCCACTTGCAATC	NA	False	NA	6	True	AATAAA	-19	NA	52019066	52067375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52019377_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
WTC11_00028041	chr15	+	656	2	FSM	ENSG00000069956.14	ENST00000558841.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTTTCCTTTTGAT	52019822	False	NA	NA	False	AAGAAA	-44	NA	52019921	52046374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52020033_52045829
WTC11_00028042	chr15	+	314	1	FSM	ENSG00000242327.1	ENST00000486386.1	453	1	175	-36	175	36	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAACAACAACAAAAAAAC	NA	False	NA	NA	False	AATAAA	-8	NA	52095469	52095783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52095500_52095800
WTC11_00028043	chr15	+	418	1	FSM	ENSG00000231169.4	ENST00000567221.2	672	1	309	-55	309	55	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCAGACTCTTGGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	52505499	52505917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52505500_52505900
WTC11_00028044	chr15	+	1687	12	FSM	ENSG00000069943.10	ENST00000539642.5	1668	12	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.6851248738982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCCTAGATAAATTAAC	55318978	True	NA	NA	False	NA	NA	NA	55319231	55355432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_55319414_55320274_55320411_55321269_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
WTC11_00028045	chr15	+	757	3	FSM	ENSG00000069943.10	ENST00000563742.1	1937	3	1180	0	-42	0	multi-exon	FALSE	canonical	3	48	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTAGTTTTATTGTTT	NA	False	NA	13	True	AATAAA	-18	NA	55350698	55355647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_55350913_55354797_55354979_55355285
WTC11_00028046	chr15	+	766	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	21	81	21	-47	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGACTTTTTAAATG	55408444	True	NA	11	True	AATAAA	-22	NA	55408515	55418717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_55408787_55418222
WTC11_00028048	chr15	+	4417	8	FSM	ENSG00000151575.14	ENST00000558083.2	4440	8	-12	35	-3	-35	multi-exon	FALSE	canonical	3	32	junction_5	10.913388145591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATGTTATTAAAATTAA	56364427	True	NA	NA	False	AATATA	-13	NA	56365434	56398306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
WTC11_00028049	chr15	+	1463	12	ISM	ENSG00000151575.14	ENST00000352903.6	1433	13	8	17159	-3	-1407	5prime_fragment	FALSE	canonical	3	32	junction_6	9.54761880226627	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGCTTTAAAAGAAAA	56364427	True	NA	37	True	NA	NA	NA	56365434	56428715	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366
WTC11_00028052	chr15	+	2005	3	FSM	ENSG00000151575.14	ENST00000560582.2	2005	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATGAAATGGCATTT	NA	False	NA	-14	True	AATAAA	-27	NA	56394720	56430122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56394835_56412301_56412437_56428366
WTC11_00028053	chr15	+	6133	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	-19	0	0	0	multi-exon	FALSE	canonical	3	125	junction_14	47.8869502056667	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	56918363	False	NA	NA	False	AATAAA	-37	NA	56918624	57289853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
WTC11_00028054	chr15	+	6061	20	FSM	ENSG00000140262.18	ENST00000267811.9	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_14	41.4524391217365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	56918363	False	NA	NA	False	AATAAA	-37	NA	56918624	57289853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
WTC11_00028056	chr15	+	575	7	FSM	ENSG00000140262.18	ENST00000557947.5	575	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.6929447340824	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCTGCTACAAGTTCC	56919121	False	NA	NA	False	NA	NA	NA	56919147	57192239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56919229_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157
WTC11_00028057	chr15	+	693	4	FSM	ENSG00000140262.18	ENST00000561152.1	675	4	-18	0	-18	0	multi-exon	FALSE	canonical	1	5	junction_2	116.793264645983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTACAGCAGAGATACT	56919341	False	NA	NA	False	AAAACA	-20	NA	56919498	57166428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56919989_56921025_56921099_57091788_57091892_57166401
WTC11_00028060	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	78.0612295288484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	57218688	True	NA	9	True	AATAAA	-18	NA	57219465	57288506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
WTC11_00028064	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	25.2994412664601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57372881	True	NA	9	True	AATAAA	-20	NA	57376504	57550717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
WTC11_00028065	chr15	+	7268	20	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	40.1421987674275	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57372881	True	NA	9	True	AATAAA	-20	NA	57376504	57550717	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_57376568_57402660_57402715_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
WTC11_00028066	chr15	+	546	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9071	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.1993265821489	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCCTCATCTGTTTTGT	57385109	True	NA	21	True	AGTAAA	-15	NA	57386216	57407281	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_57386298_57402657_57402715_57405965_57406065_57406972
WTC11_00028067	chr15	+	7443	19	NNC	ENSG00000128849.11	novel	577	3	NA	NA	10793	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	41.745554949296	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57386831	False	NA	9	True	AATAAA	-20	NA	57387938	57550717	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_57388228_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547351
WTC11_00028068	chr15	+	2394	13	FSM	ENSG00000263155.6	ENST00000267853.10	2398	13	-7	11	-7	-7	multi-exon	TRUE	canonical	1	3	junction_4	2.69258240356725	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTACTAATGTTGTCTC	57591776	True	NA	-4	True	AATAAA	-13	NA	57591896	57685353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57661449_57661534_57674967_57675069_57684401
WTC11_00028069	chr15	+	4202	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	-58	-30	-39	30	multi-exon	FALSE	canonical	3	214	junction_1	28.2960539062723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTCGTGTCACATGG	57701658	True	NA	-79	True	AATAGA	-42	NA	57706655	57717587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
WTC11_00028071	chr15	+	1562	1	Genic_Genomic	ENSG00000259250.1	novel	NA	NA	NA	NA	-419	-3027	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGATTTCTGTGAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	58587087	58588649	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_+_58587100_58588600
WTC11_00028072	chr15	+	9430	9	FSM	ENSG00000128923.11	ENST00000559228.6	9250	9	-180	0	-70	0	multi-exon	FALSE	canonical	3	51	junction_8	11.4229757506527	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTCGCTCTGTATATT	58770893	False	NA	NA	False	AATAAA	-20	NA	58771121	58861900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
WTC11_00028074	chr15	+	363	1	FSM	ENSG00000259738.1	ENST00000559497.1	298	1	-72	7	-72	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTGAGCCTGACGGG	58864908	False	NA	NA	False	NA	NA	NA	58864933	58865296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58864900_58865300
WTC11_00028075	chr15	+	293	1	FSM	ENSG00000242747.1	ENST00000465295.1	476	1	68	115	68	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTACCTGGGTTCAAC	58869701	False	NA	NA	False	AAAAAG	-15	NA	58869726	58870019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58869700_58870000
WTC11_00028077	chr15	+	5561	14	NIC	ENSG00000157450.16	novel	5905	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	28.1698147231831	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAATTGTTAATATAGG	58983556	True	NA	NA	False	AATAAA	-17	NA	58987665	59097054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092512_59092641_59094782
WTC11_00028078	chr15	+	5818	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	26	61	12	-61	multi-exon	FALSE	canonical	3	69	junction_6	23.9980275323575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGCACACTTCAGCATT	58983579	True	NA	37	True	NA	NA	NA	58987688	59097358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
WTC11_00028079	chr15	+	4892	14	NNC	ENSG00000157450.16	novel	5905	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	29.3900518531185	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTT	58983575	True	NA	11	True	AATAAA	-21	NA	58987684	59096431	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075956_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
WTC11_00028080	chr15	+	5278	14	FSM	ENSG00000157450.16	ENST00000559209.5	5278	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	32.2071696233607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAATTGTTAATATAGG	58983842	False	NA	NA	False	AATAAA	-17	NA	58987951	59097054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084101_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
WTC11_00028083	chr15	+	3134	7	ISM	ENSG00000157450.16	ENST00000561186.5	4536	13	50197	-630	76	0	3prime_fragment	FALSE	canonical	3	23	junction_1	43.5829349886194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAATTGTTAATATAGG	59081009	True	NA	NA	False	AATAAA	-17	NA	59081019	59097054	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_59081285_59084101_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092512_59092641_59094782
WTC11_00028085	chr15	+	3045	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	-20	-1537	0	1537	multi-exon	FALSE	canonical	3	717	junction_5	42.4497865130085	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGGTGATTTAGCT	59091882	True	NA	NA	False	NA	NA	NA	59105125	59126582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
WTC11_00028087	chr15	+	869	3	FSM	ENSG00000157470.12	ENST00000558513.1	887	3	0	18	0	-18	multi-exon	FALSE	canonical	3	6	junction_1	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTATTACTCAAACAATT	59438069	True	NA	NA	False	ATTAAA	-33	NA	59438200	59460622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59438283_59458549_59458647_59459932
WTC11_00028089	chr15	+	817	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	59768329	59769146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59768300_59769100
WTC11_00028090	chr15	+	3002	2	FSM	ENSG00000171956.7	ENST00000396057.6	2871	2	-131	0	-54	0	multi-exon	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTTTGTGTGTTTTT	60001618	True	NA	19	True	ATTAAA	-16	NA	60004179	60007444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_60004644_60004906
WTC11_00028092	chr15	+	12041	59	FSM	ENSG00000171914.17	ENST00000636159.2	12023	59	-18	0	6	0	multi-exon	TRUE	canonical	0	0	junction_26	17.476508778824	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGAGGACTCATGG	62388523	True	NA	NA	False	AATAAA	-17	NA	62390531	62844631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_62390686_62589686_62589763_62618350_62618476_62647274_62647447_62650083_62650182_62652004_62652135_62653161_62653315_62655943_62656087_62657770_62657899_62673826_62673891_62675216_62675322_62686640_62686797_62692839_62692942_62694315_62694393_62697687_62697869_62698753_62698868_62701105_62701215_62701991_62702201_62702765_62702865_62707085_62707254_62708501_62708797_62711910_62712078_62716330_62716460_62717575_62717690_62719766_62719881_62722352_62722488_62724975_62725105_62727086_62727190_62736877_62737087_62738213_62738334_62739347_62739546_62740629_62740770_62748350_62748445_62750401_62750492_62752304_62752428_62753772_62753917_62755531_62755694_62761680_62761822_62762271_62762454_62763562_62763696_62766320_62766423_62770963_62771135_62776763_62776911_62781139_62781242_62783770_62783891_62792640_62792788_62796126_62796294_62797218_62797403_62800367_62800494_62800652_62800770_62805599_62805786_62809924_62810033_62819515_62819622_62820485_62820611_62833503_62833630_62835736_62835800_62835890_62836074_62838855_62838982_62840481
WTC11_00028096	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	527.138630535146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63006892	True	NA	20	True	AATAAA	-15	NA	63042631	63066093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
WTC11_00028097	chr15	+	3960	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	-3	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	63006944	True	NA	34	True	AAAACA	-20	NA	63042683	63047726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026
WTC11_00028099	chr15	+	1718	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	-1	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	187.662429644295	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	63006944	True	NA	-5	True	AATAAA	-1	NA	63042683	63071889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
WTC11_00028101	chr15	+	988	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	-11	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	447.724454882688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	63007007	True	NA	NA	False	NA	NA	NA	63042746	63071222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
WTC11_00028102	chr15	+	1120	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	301	junction_9	468.529404060338	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63007019	True	NA	20	True	AATAAA	-15	NA	63042758	63066093	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
WTC11_00028105	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	377.917980519583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	63045018	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
WTC11_00028106	chr15	+	1560	8	NIC	ENSG00000140416.23	novel	1564	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	391	junction_4	535.521069918384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	63045027	True	NA	-5	True	AATAAA	-1	NA	63048479	63071889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
WTC11_00028108	chr15	+	2698	8	FSM	ENSG00000140416.23	ENST00000558264.5	2687	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	64	junction_4	561.739608497658	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTGGTCCTGTCAT	63055701	False	NA	18	True	AATAAA	-24	NA	63055717	63071912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63061712_63061789_63062214_63062278_63062575_63062646_63071089
WTC11_00028111	chr15	+	3069	5	FSM	ENSG00000103642.12	ENST00000413507.3	2978	5	-95	4	-95	-4	multi-exon	FALSE	canonical	3	99	junction_4	14.5494845269515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATATGTGTATTTTTTGT	NA	False	NA	22	True	AATAAA	-33	NA	63121737	63131467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484
WTC11_00028112	chr15	+	1911	6	FSM	ENSG00000103642.12	ENST00000261893.9	1911	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	15.4350251052598	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTCTGCATGTGTAA	63120363	True	NA	9	True	AATAAA	-17	NA	63121860	63142061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484_63129651_63141279
WTC11_00028114	chr15	+	4924	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	-124	0	-78	0	multi-exon	FALSE	canonical	3	196	junction_5	25.5885816372085	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	NA	False	NA	66	True	AATAAA	-23	NA	63189481	63267776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
WTC11_00028116	chr15	+	766	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	-81	0	-76	0	multi-exon	FALSE	canonical	3	33	junction_3	44.7325384926901	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	63275060	True	NA	-88	True	NA	NA	NA	63277528	63305801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
WTC11_00028117	chr15	+	4214	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	-76	0	-76	0	multi-exon	FALSE	canonical	3	105	junction_3	15.4350251052598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	63275060	True	NA	10	True	AATAAA	-22	NA	63277528	63309126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
WTC11_00028118	chr15	+	5518	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	-1	0	-1	0	multi-exon	TRUE	canonical	3	119	junction_1	21.1351337244651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	63502205	True	NA	12	True	ATTAAA	-16	NA	63504591	63594633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
WTC11_00028119	chr15	+	978	9	FSM	ENSG00000140455.17	ENST00000557884.5	958	9	-20	0	-1	0	multi-exon	FALSE	canonical	3	14	junction_3	63.5795515476478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCCCGCCGTGGA	63502205	True	NA	NA	False	TTTAAA	-33	NA	63504591	63559884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856
WTC11_00028120	chr15	+	564	4	FSM	ENSG00000140455.17	ENST00000561326.5	543	4	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.4179461373089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATATATGTGGCATGT	63502248	True	NA	NA	False	NA	NA	NA	63504634	63574152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63562894_63563009_63570432_63570580_63574045
WTC11_00028121	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	45.4030835957207	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	63502248	True	NA	6	True	AATAAA	-17	NA	63504634	63591444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
WTC11_00028122	chr15	+	4682	8	NNC	ENSG00000140455.17	novel	979	4	NA	NA	13912	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	55.5278933399738	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	NA	False	NA	12	True	ATTAAA	-16	NA	63567244	63594633	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_63567318_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
WTC11_00028124	chr15	+	757	3	FSM	ENSG00000140455.17	ENST00000559718.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTTATAGGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	63588519	63591053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63588816_63588943_63589012_63590660
WTC11_00028125	chr15	+	8223	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	111.250498737703	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	64087390	True	NA	10	True	AATAAA	-22	NA	64095972	64144231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
WTC11_00028127	chr15	+	408	2	FSM	ENSG00000028528.15	ENST00000559401.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGGTGAGTCCACTGAG	64131609	False	NA	NA	False	NA	NA	NA	64131622	64134801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64131893_64134663
WTC11_00028128	chr15	+	2043	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	-30	0	-30	0	multi-exon	TRUE	canonical	3	105	junction_11	14.9840192649814	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385120	True	NA	19	True	TATAAA	-21	NA	64387805	64455303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
WTC11_00028132	chr15	+	8951	10	FSM	ENSG00000180357.10	ENST00000326648.5	9006	10	55	0	55	0	multi-exon	FALSE	canonical	2	14	junction_2	12.8418682537594	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTTAGTTTGCCTTT	64459707	True	NA	49	True	AATAAA	-25	NA	64460632	64686068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64460839_64499292_64500167_64622826_64623053_64670345_64670434_64673915_64676257_64678115_64678483_64680184_64680361_64680645_64680863_64681308_64681388_64681691
WTC11_00028133	chr15	+	8745	9	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	38715	0	-3085	0	3prime_fragment	FALSE	canonical	2	14	junction_1	12.1449578014911	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTTAGTTTGCCTTT	NA	False	NA	49	True	AATAAA	-25	NA	64499292	64686068	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_64500167_64622826_64623053_64670345_64670434_64673915_64676257_64678115_64678483_64680184_64680361_64680645_64680863_64681308_64681388_64681691
WTC11_00028134	chr15	+	371	1	FSM	ENSG00000243403.1	ENST00000483963.1	348	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	64592955	64593326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64593000_64593300
WTC11_00028135	chr15	+	763	1	FSM	ENSG00000264937.1	ENST00000581636.1	240	1	-196	-327	-196	327	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCACTGCACTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	64696425	64697188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64696400_64697200
WTC11_00028136	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.22218803410712	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	64840217	True	NA	26	True	AATAAA	-16	NA	64841914	64868002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
WTC11_00028137	chr15	+	1500	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	-23	0	-7	0	multi-exon	FALSE	canonical	3	6	junction_1	8.18290901819151	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	64911395	True	NA	6	True	AGTAAA	-24	NA	64911894	64932514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
WTC11_00028138	chr15	+	3124	10	FSM	ENSG00000074696.13	ENST00000442729.6	1332	10	-74	-1718	-10	6	multi-exon	TRUE	canonical	0	0	junction_5	657.119715871967	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTGCTTAAAGATAAT	65530397	False	NA	26	True	ATTAAA	-23	NA	65530407	65578355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
WTC11_00028139	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	490.633019679679	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	65513780	True	NA	20	True	ATTAAA	-17	NA	65530462	65578349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
WTC11_00028140	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	74.7039992236025	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	65851072	True	NA	30	True	AATATA	-29	NA	65869490	65891989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
WTC11_00028141	chr15	+	3763	17	FSM	ENSG00000166938.13	ENST00000319194.9	3763	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	47.198674173646	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	23	True	AATAAA	-18	NA	66293216	66333898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66293368_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
WTC11_00028142	chr15	+	327	3	FSM	ENSG00000166938.13	ENST00000525134.6	327	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	89.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATGGCCCTGACTTGCT	66293269	False	NA	NA	False	NA	NA	NA	66293290	66306950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66293337_66294987_66295142_66306823
WTC11_00028143	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	11.5650335062204	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	66289629	True	NA	23	True	AATAAA	-18	NA	66293567	66333898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
WTC11_00028144	chr15	+	3414	10	ISM	ENSG00000166938.13	ENST00000564909.5	2399	12	-6	1794	-6	-1221	intron_retention	FALSE	canonical	3	181	junction_2	8.86942313043338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTTATGTATCC	66289651	True	NA	NA	False	AATAAA	-19	NA	66293589	66324767	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686
WTC11_00028146	chr15	+	873	7	FSM	ENSG00000166938.13	ENST00000525109.1	873	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	71.8735386324867	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCGCTCAATTCATGGA	66289700	False	NA	NA	False	NA	NA	NA	66293638	66315074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66293736_66294987_66295142_66306761_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035
WTC11_00028150	chr15	+	2547	11	FSM	ENSG00000169032.11	ENST00000307102.10	2547	11	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	47.8472569746689	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	66381797	True	NA	18	True	AATAAA	-36	NA	66386911	66491544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
WTC11_00028151	chr15	+	2217	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	-11	0	-11	0	multi-exon	TRUE	canonical	3	17	junction_1	132.327971500823	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	NA	False	NA	NA	False	AAAACA	-22	NA	66504947	66548426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
WTC11_00028152	chr15	+	3271	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	-15	0	-15	0	multi-exon	FALSE	canonical	3	155	junction_1	100.247548536881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	NA	False	NA	92	True	AATAAA	-24	NA	66505101	66549487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
WTC11_00028153	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	52.7546440527827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	66501583	True	NA	7	True	AATAAA	-19	NA	66505325	66550130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
WTC11_00028154	chr15	+	613	6	FSM	ENSG00000174442.12	ENST00000561583.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	26.2556660551585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGGTGCAAAATGAGC	66520477	False	NA	NA	False	NA	NA	NA	66520507	66528933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851
WTC11_00028156	chr15	+	7596	4	NNC	ENSG00000137834.15	novel	3828	4	NA	NA	30	671	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7.78888096369861	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTTTTTTAAACTGT	66701293	True	NA	NA	False	AATAAA	-11	NA	66702265	66781984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_66708739_66711667_66711725_66716420_66716499_66780996
WTC11_00028157	chr15	+	3818	4	FSM	ENSG00000137834.15	ENST00000288840.10	3828	4	-3	13	-3	-13	multi-exon	FALSE	canonical	3	19	junction_1	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCAAACTTAGCAGCTT	66701260	True	NA	NA	False	AATAAA	-3	NA	66702232	66782836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66704076_66711667_66711725_66716420_66716499_66780996
WTC11_00028158	chr15	+	6464	9	FSM	ENSG00000166949.17	ENST00000327367.9	6464	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	15.2786615905975	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGCCAGGAGCTCA	67064619	True	NA	24	True	AATAAA	-15	NA	67065601	67195169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67066361_67164894_67165089_67165252_67165385_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
WTC11_00028160	chr15	+	5697	2	FSM	ENSG00000166949.17	ENST00000558763.1	1957	2	-69	-3671	-69	19	multi-exon	FALSE	canonical	3	119	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTTGCTGCTGTCTCT	NA	False	NA	47	True	AATAAA	-38	NA	67186592	67195192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67187510_67190412
WTC11_00028161	chr15	+	3032	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	-5	1166	-5	-1166	multi-exon	FALSE	canonical	3	170	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGTGGCATGTGGGGA	67520176	True	NA	NA	False	NA	NA	NA	67521125	67528980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67521595_67526417
WTC11_00028162	chr15	+	2304	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	40	0	40	0	multi-exon	FALSE	canonical	3	39	junction_1	8.48474688515901	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67540736	True	NA	24	True	AATAAA	-21	NA	67542742	67807114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
WTC11_00028163	chr15	+	429	8	FSM	ENSG00000137764.20	ENST00000439036.5	429	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	20.3449838374706	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGATGAATTGCCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	67563299	67641489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67641444
WTC11_00028164	chr15	+	8286	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	-14	-292	-8	292	multi-exon	FALSE	canonical	3	167	junction_1	17.547568485785	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTTAGTGTTCCAT	68049174	True	NA	NA	False	AATAAA	-18	NA	68054300	68194139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
WTC11_00028165	chr15	+	411	2	FSM	ENSG00000033800.14	ENST00000564009.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAGGGCATCTTGGCA	NA	False	NA	NA	False	CATAAA	-26	NA	68146661	68153961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_68146701_68153589
WTC11_00028166	chr15	+	7177	2	FSM	ENSG00000169018.6	ENST00000306917.5	7177	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGAGGTTTGTGTCT	68277734	False	NA	31	True	AGTAAA	-14	NA	68277744	68295862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_68278666_68289606
WTC11_00028167	chr15	+	3537	12	FSM	ENSG00000103647.13	ENST00000261861.10	3545	12	3	5	3	-5	multi-exon	FALSE	canonical	3	18	junction_9	3.11753239990586	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCTGGGCATAGCCAT	68578687	True	NA	3	True	AATAAA	-15	NA	68578995	68727801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_68579278_68645159_68645361_68695139_68695257_68710731_68710882_68711541_68711707_68713924_68714042_68714558_68714664_68715214_68715312_68718697_68718811_68719143_68719235_68719412_68719553_68725842
WTC11_00028168	chr15	+	1329	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	38	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	69159252	True	NA	2	True	AATAAA	-16	NA	69160562	69197458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69160758_69194435_69194526_69196414
WTC11_00028169	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.03112887414927	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	69159324	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
WTC11_00028172	chr15	+	727	5	FSM	ENSG00000137819.14	ENST00000558684.5	728	5	0	1	0	-1	multi-exon	FALSE	canonical	3	26	junction_2	9.39414711402797	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCGCTCTGACCTC	69297765	True	NA	NA	False	NA	NA	NA	69298951	69389780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69299057_69337340_69337502_69379882_69380011_69384676_69384883_69389653
WTC11_00028175	chr15	+	3355	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	-13	9	-2	0	multi-exon	FALSE	canonical	3	220	junction_17	63.8825452830171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATACATAGTTGTGT	69410030	True	NA	96	True	ATTAAA	-12	NA	69414290	69448416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
WTC11_00028176	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	118.954122147168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410088	True	NA	105	True	ATTAAA	-21	NA	69414348	69448425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
WTC11_00028183	chr15	+	1968	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	-5	-1	0	0	multi-exon	FALSE	canonical	3	21541	junction_2	1403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	69276382	True	NA	33	True	AATAAA	-15	NA	69452813	69455547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453021_69453646_69455288_69455427
WTC11_00028184	chr15	+	1178	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	-4	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_3	1482.43365974858	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	69276382	True	NA	68	True	AATAAA	-31	NA	69452813	69456205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
WTC11_00028185	chr15	+	952	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	-507	0	-151	multi-exon	FALSE	canonical	3	1049	junction_1	10246	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGTGGAAAAAAAAAAAGA	69276382	True	NA	-83	True	NA	NA	NA	69452813	69456054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453021_69455169_69455288_69455427
WTC11_00028193	chr15	+	319	4	FSM	ENSG00000166233.15	ENST00000567762.1	319	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.9593574906118	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTGTCAGATCTGC	72474921	False	NA	NA	False	AGTAAA	-44	NA	72474935	72544923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_72475015_72496790_72496859_72518066_72518135_72544819
WTC11_00028196	chr15	+	2450	15	FSM	ENSG00000140463.14	ENST00000395205.6	2450	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	140.629633710506	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTCTTCCCTTACCT	72682367	True	NA	14	True	AATAAA	-19	NA	72686178	72738475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
WTC11_00028202	chr15	+	7355	28	NIC	ENSG00000067141.17	novel	4441	28	NA	NA	-288	-13	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	11.9668036490435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAATCCAATCAAA	73052144	False	NA	4	True	TTTAAA	-41	NA	73052174	73305185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_73052806_73116539_73116858_73122524_73122801_73126416_73126571_73135890_73136028_73176402_73176558_73178306_73178428_73236286_73236507_73244343_73244499_73249059_73249209_73249582_73249722_73253399_73253450_73254681_73254830_73258765_73258877_73260270_73260466_73266315_73266412_73270057_73270234_73270315_73270455_73272454_73272563_73273810_73274006_73278130_73278200_73282963_73283112_73288312_73288552_73289145_73289239_73293389_73293549_73298347_73298612_73301320_73301458_73302612
WTC11_00028203	chr15	+	5895	24	FSM	ENSG00000067141.17	ENST00000560328.1	5895	24	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	12.3098006046514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTCTGGTCTGGTC	73135965	True	NA	17	True	AATACA	-13	NA	73135984	73305198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73136028_73176402_73176558_73178306_73178428_73236286_73236507_73244343_73244499_73249059_73249209_73249582_73249722_73253399_73253450_73254681_73254830_73258765_73258877_73260270_73260466_73266315_73266412_73270057_73270234_73270315_73270455_73272454_73272563_73273810_73274006_73278130_73278200_73282963_73283112_73288312_73288552_73289145_73289239_73293389_73293549_73298347_73298612_73301320_73301458_73302612
WTC11_00028213	chr15	+	1168	4	FSM	ENSG00000103855.18	ENST00000559978.1	503	4	-200	-465	-200	4	multi-exon	FALSE	canonical	3	19	junction_3	356.390235556475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTGAAGTGTTTGG	73709296	False	NA	20	True	AATAAA	-19	NA	73709364	73714518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73709690_73711134_73711171_73712933_73713064_73713841
WTC11_00028214	chr15	+	1620	2	FSM	ENSG00000103855.18	ENST00000559465.1	1620	2	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	73711119	False	NA	16	True	AATAAA	-15	NA	73711131	73714514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73711171_73712933
WTC11_00028215	chr15	+	2353	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	-11	4	-11	-4	multi-exon	TRUE	canonical	3	54	junction_1	8.34665601703261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGTGGCTCTGCAT	73925629	True	NA	2	True	AATAAA	-11	NA	73926450	73952132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
WTC11_00028216	chr15	+	1079	3	FSM	ENSG00000129038.16	ENST00000562548.1	1110	3	26	5	26	-4	multi-exon	FALSE	canonical	3	74	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGTGGCTCTGCAT	NA	False	NA	2	True	AATAAA	-11	NA	73947241	73952132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73947903_73949458_73949575_73951830
WTC11_00028218	chr15	+	3050	8	FSM	ENSG00000140464.20	ENST00000268059.10	3029	8	-21	0	-20	0	multi-exon	FALSE	canonical	3	51	junction_7	35.0486542290186	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992564	True	NA	26	True	AATAAA	-18	NA	73994695	74036394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035171
WTC11_00028219	chr15	+	2906	7	FSM	ENSG00000140464.20	ENST00000354026.10	2885	7	-21	0	-20	0	multi-exon	FALSE	canonical	3	51	junction_6	42.3179105764398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992564	True	NA	26	True	AATAAA	-18	NA	73994695	74036394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035171
WTC11_00028220	chr15	+	2187	8	FSM	ENSG00000140464.20	ENST00000395135.7	2199	8	12	0	12	0	multi-exon	TRUE	canonical	3	83	junction_7	27.5355058357869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGCCTGAGTGTGCG	73992553	True	NA	3	True	AATAAA	-13	NA	73994684	74043337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988
WTC11_00028221	chr15	+	5541	9	FSM	ENSG00000140464.20	ENST00000268058.8	5565	9	0	24	0	-9	multi-exon	FALSE	canonical	3	39	junction_8	37.3329613076702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATCTTAGAAAAAAACAAA	73992584	True	NA	NA	False	AATAAA	-9	NA	73994715	74047803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988_74043140_74044220
WTC11_00028223	chr15	+	3658	7	FSM	ENSG00000140464.20	ENST00000435786.6	3643	7	-15	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	24.6576560118759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992597	True	NA	26	True	AATAAA	-18	NA	73994728	74036394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477
WTC11_00028224	chr15	+	2000	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	-15	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	35.485912697858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992597	True	NA	4	True	AATAAA	-14	NA	73994728	74043338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
WTC11_00028226	chr15	+	5104	8	FSM	ENSG00000140464.20	ENST00000565898.5	5393	8	-13	302	0	-302	multi-exon	FALSE	canonical	3	39	junction_7	43.2765195326189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGTGTCAACTAATGGG	73992584	True	NA	NA	False	NA	NA	NA	73994715	74047510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988_74043140_74044220
WTC11_00028228	chr15	+	4396	3	FSM	ENSG00000140464.20	ENST00000564725.1	4620	3	0	224	0	-224	multi-exon	FALSE	canonical	3	132	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCATTATGATGTGTTT	73995892	False	NA	19	True	AATAAA	-32	NA	73998023	74028218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73998477_74022827_74023409_74024856
WTC11_00028235	chr15	+	1353	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	33	5	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.20144916122817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	74459852	True	NA	9	True	AATAAA	-18	NA	74461297	74481288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
WTC11_00028236	chr15	+	1260	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	36	4	0	-1	multi-exon	FALSE	canonical	3	13	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	74459852	True	NA	11	True	AATAAA	-20	NA	74461297	74481290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74462099_74479059_74479279_74481050
WTC11_00028238	chr15	+	4279	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	-53	2	-39	0	multi-exon	FALSE	canonical	3	917	junction_7	94.8429623113913	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGTCTCTCTCAGTTG	74525195	True	NA	29	True	AATAAA	-18	NA	74541166	74598129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
WTC11_00028239	chr15	+	2158	4	FSM	ENSG00000179361.18	ENST00000569680.1	2654	4	0	496	0	-496	multi-exon	FALSE	canonical	3	1095	junction_3	46.8069320602076	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTGGCAGCCTTATT	74525292	True	NA	NA	False	NA	NA	NA	74541263	74574521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131
WTC11_00028240	chr15	+	692	2	FSM	ENSG00000179361.18	ENST00000566468.1	692	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGGACATCGATG	74591046	False	NA	NA	False	NA	NA	NA	74591186	74593201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74591815_74593137
WTC11_00028242	chr15	+	833	7	FSM	ENSG00000179335.20	ENST00000569063.5	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	85.1391018666903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTGAATTCTGAGTT	74611610	True	NA	NA	False	NA	NA	NA	74615835	74627401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351
WTC11_00028243	chr15	+	2012	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	-164	6	-124	0	multi-exon	TRUE	canonical	3	200	junction_1	38.2784933814741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTTGTGGAGAGCT	74615621	False	NA	13	True	AATAAA	-13	NA	74615671	74630195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
WTC11_00028246	chr15	+	1784	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	75.3008779644847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74611646	True	NA	15	True	AATAAA	-19	NA	74615871	74630116	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
WTC11_00028251	chr15	+	2437	8	FSM	ENSG00000179335.20	ENST00000562078.5	2455	8	18	0	18	0	multi-exon	FALSE	canonical	3	220	junction_7	32.0261372848452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74623626	False	NA	15	True	AATAAA	-19	NA	74623637	74630116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
WTC11_00028254	chr15	+	2768	13	FSM	ENSG00000103653.17	ENST00000220003.14	2743	13	-25	0	-25	0	multi-exon	FALSE	canonical	3	106	junction_3	14.7843291660085	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTGTCCTGCCCGGT	74777556	True	NA	46	True	NA	NA	NA	74782054	74803197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
WTC11_00028258	chr15	+	1171	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	-23	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	33.8045854877707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	74885717	True	NA	8	True	NA	NA	NA	74890038	74893786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
WTC11_00028259	chr15	+	854	6	FSM	ENSG00000178802.18	ENST00000561470.5	851	6	-3	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	72.0155538755344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTACAGCTGCACC	74885717	True	NA	NA	False	NA	NA	NA	74890038	74896188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
WTC11_00028268	chr15	+	3390	7	FSM	ENSG00000198794.12	ENST00000425597.8	3379	7	-11	0	-4	0	multi-exon	FALSE	canonical	3	80	junction_3	39.1269301973291	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	74990532	True	NA	16	True	AATAAA	-21	NA	74995551	75021495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
WTC11_00028272	chr15	+	2214	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	1	0	1	0	multi-exon	FALSE	canonical	3	66	junction_1	70.612746724653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	75020540	True	NA	10	True	AATAAA	-18	NA	75023590	75050726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
WTC11_00028274	chr15	+	945	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	-19	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	94.7918772891433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	75020535	True	NA	NA	False	NA	NA	NA	75023585	75049581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
WTC11_00028276	chr15	+	1188	5	ISM	ENSG00000138621.12	ENST00000342932.8	2215	6	4659	988	0	0	3prime_fragment	FALSE	canonical	3	122	junction_1	51.6551062335564	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	75025198	False	NA	9	True	AATAAA	-13	NA	75028248	75049738	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
WTC11_00028280	chr15	+	4479	3	NIC	ENSG00000167173.19	novel	4425	3	NA	NA	-2	0	intron_retention	FALSE	canonical	3	41	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	75196260	True	NA	28	True	ATTAAA	-22	NA	75201879	75212169	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_75202060_75205998_75208877_75210748
WTC11_00028281	chr15	+	4249	2	FSM	ENSG00000167173.19	ENST00000567617.1	4249	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	75206003	False	NA	28	True	ATTAAA	-22	NA	75206048	75212169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75208877_75210748
WTC11_00028283	chr15	+	4214	1	FSM	ENSG00000140365.16	ENST00000564068.1	4204	1	-10	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATGTGTGCAGGGGG	75327191	True	NA	8	True	AATAAA	-10	NA	75336052	75340266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336100_75340300
WTC11_00028285	chr15	+	740	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	-6	-12	0	12	multi-exon	FALSE	canonical	3	43	junction_6	302.505096375802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTGGGTTCAGATC	75327191	True	NA	27	True	AATAAA	-29	NA	75336052	75340285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
WTC11_00028288	chr15	+	1008	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	242.284282340782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCAGGGGGTTC	75327222	True	NA	11	True	AATAAA	-13	NA	75336083	75340269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_75336231_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
WTC11_00028290	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	373.500950467332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	75327237	True	NA	13	True	AATAAA	-15	NA	75336098	75340271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
WTC11_00028291	chr15	+	3256	3	FSM	ENSG00000140365.16	ENST00000565834.1	1671	3	-1585	0	371	0	multi-exon	FALSE	canonical	3	839	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGGCCTCCCAGATC	75327614	False	NA	NA	False	NA	NA	NA	75336475	75340116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75338686_75338984_75339879_75339964
WTC11_00028292	chr15	+	1069	6	FSM	ENSG00000140365.16	ENST00000569245.5	867	6	-202	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	39.5454169278818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTATAAAGGAATGT	75338016	True	NA	-2	True	NA	NA	NA	75338061	75340256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
WTC11_00028294	chr15	+	3643	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	22	-1868	7	0	multi-exon	FALSE	canonical	2	6	junction_1	12.3087843770011	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATGATCATGAGTATCA	75347325	True	NA	NA	False	AATAAA	-18	NA	75347659	75357115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
WTC11_00028297	chr15	+	264	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATATCTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	75575008	75575272	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_75575000_75575300
WTC11_00028303	chr15	+	1495	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	-9	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_2	275.737846513677	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	75892080	True	NA	NA	False	GATAAA	-15	NA	75903868	75930655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
WTC11_00028304	chr15	+	4508	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	-28	-2316	-26	2133	multi-exon	FALSE	canonical	3	50	junction_1	259.577040587183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAATCAAATATTTGCA	75892061	True	NA	NA	False	NA	NA	NA	75903849	75936423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
WTC11_00028305	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.921910149673	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75942511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
WTC11_00028312	chr15	+	935	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	-188	0	188	multi-exon	FALSE	canonical	3	422	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGGGATGCCAAGGCA	77418714	False	NA	NA	False	AAAAAG	-37	NA	77420934	77465011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77421005_77458403_77458497_77464239
WTC11_00028315	chr15	+	5962	1	FSM	ENSG00000140382.15	ENST00000558288.1	3558	1	-2293	-111	1464	111	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGAAATCGAGACCATC	77479733	False	NA	NA	False	NA	NA	NA	77479756	77485718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77479800_77485700
WTC11_00028322	chr15	+	2756	8	FSM	ENSG00000166411.14	ENST00000558535.1	2586	8	-170	0	-170	0	multi-exon	FALSE	canonical	3	292	junction_3	15.7363481488312	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTGCTTTCTCTACCT	NA	False	NA	19	True	AATAAA	-16	NA	78159799	78170542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
WTC11_00028324	chr15	+	3070	7	FSM	ENSG00000140403.13	ENST00000394852.8	3127	7	57	0	10	0	multi-exon	FALSE	canonical	3	16	junction_1	9.3348213099603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGTGGCTTTGCTTTTT	78264229	False	NA	13	True	ATTAAA	-18	NA	78264618	78282191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
WTC11_00028334	chr15	+	1100	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	-3	-3	-3	3	multi-exon	FALSE	canonical	3	171	junction_1	1130.7164142149	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAGGAATAAATTCTC	78513817	True	NA	13	True	AATAAA	-14	NA	78540417	78549189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
WTC11_00028335	chr15	+	1028	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	-9	0	-3	0	multi-exon	FALSE	canonical	3	40	junction_3	1240.39233424636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	78513817	True	NA	-19	True	AATAAA	-29	NA	78540417	78549204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
WTC11_00028338	chr15	+	4377	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	1	0	-1	multi-exon	FALSE	canonical	3	3132	junction_8	190.823052852636	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTACTCCTGTGTATA	78513843	True	NA	NA	False	AATAAA	-13	NA	78540443	78552416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
WTC11_00028339	chr15	+	1715	10	NNC	ENSG00000041357.16	novel	4378	9	NA	NA	0	39519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1121.77159269293	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTTAATAAATGTCTGC	78513843	True	NA	-13	True	TTTAAA	-39	NA	78540443	78591936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789_78549190_78591371
WTC11_00028341	chr15	+	1153	10	NNC	ENSG00000041357.16	novel	4378	9	NA	NA	0	10942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1121.77159269293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATAGCCTCTAGGCTGAG	78513877	True	NA	NA	False	NA	NA	NA	78540477	78563359	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789_78549196_78563328
WTC11_00028345	chr15	+	3446	6	FSM	ENSG00000169684.13	ENST00000299565.9	3623	6	0	177	0	-177	multi-exon	FALSE	canonical	3	39	junction_5	44.1017006474807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTAATTTGCATTTAAT	78563536	True	NA	NA	False	NA	NA	NA	78565519	78595092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590637_78593091
WTC11_00028346	chr15	+	1920	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-24	424	intron_retention	FALSE	canonical	3	19	junction_5	51.8706082478314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTAAGGCTTACTTTA	78563563	True	NA	14	True	AATAAA	-21	NA	78565546	78594125	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
WTC11_00028347	chr15	+	2418	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-19	1894	-19	-1633	5prime_fragment	FALSE	canonical	3	128	junction_2	12.7573508221731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTTAAAACTTTTTT	78563568	True	NA	NA	False	NA	NA	NA	78565551	78591641	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
WTC11_00028348	chr15	+	1908	6	NIC	ENSG00000169684.13	novel	3623	6	NA	NA	-19	423	intron_retention	FALSE	canonical	3	12	junction_5	54.6054942290609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTTAAGGCTTACTTT	78563568	True	NA	13	True	AATAAA	-20	NA	78565551	78594124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590099_78593091
WTC11_00028349	chr15	+	516	4	FSM	ENSG00000185787.15	ENST00000557961.5	591	4	20	55	20	-55	multi-exon	FALSE	canonical	3	7509	junction_3	343.363752697728	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATAAAATGATTCCTG	NA	False	NA	107	True	AATGAA	-25	NA	78872835	78886319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140
WTC11_00028351	chr15	+	2448	13	NNC	ENSG00000185787.15	novel	2359	13	NA	NA	-2	1560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2227.76259207903	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATACGTGTCTTCAT	NA	False	NA	1	True	ATTAAA	-11	NA	78872811	78899699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982_78898060_78899421
WTC11_00028353	chr15	+	2175	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	-3	0	0	0	multi-exon	FALSE	canonical	3	6640	junction_6	618.320211781501	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	78872402	False	NA	NA	False	ATTAAA	-26	NA	78872886	78898139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
WTC11_00028357	chr15	+	1724	13	NNC	ENSG00000185787.15	novel	2359	13	NA	NA	0	30450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2227.76259207903	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAGAGTAAAAGAGAC	78771965	True	NA	NA	False	NA	NA	NA	78872953	78928589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982_78897729_78928562
WTC11_00028360	chr15	+	1489	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	-21	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	2290.27369615638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	78771995	True	NA	NA	False	NA	NA	NA	78872983	78897389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
WTC11_00028365	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	79303797	True	NA	16	True	AATAAA	-18	NA	79311111	79322840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_79311418_79313756_79314006_79321977
WTC11_00028366	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	203.892673292157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	79303844	True	NA	13	True	AATAAA	-15	NA	79311158	79322837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
WTC11_00028367	chr15	+	1559	7	FSM	ENSG00000086666.19	ENST00000559157.5	1559	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	978.245822321204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80059496	False	NA	-6	True	NA	NA	NA	80059634	80138360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80059810_80115026_80115071_80120327_80120499_80121747_80121821_80122699_80122801_80131179_80131294_80137479
WTC11_00028369	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	774.08715056295	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	80045732	True	NA	27	True	AATAAA	-27	NA	80059675	80138393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
WTC11_00028370	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	245.000734692776	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80045770	True	NA	-6	True	NA	NA	NA	80059713	80138360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
WTC11_00028373	chr15	+	1621	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	-19	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	862.740095406619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	80071949	True	NA	-8	True	NA	NA	NA	80072563	80138358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
WTC11_00028374	chr15	+	1460	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	-14	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	806.330602172583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80071949	True	NA	-6	True	NA	NA	NA	80072563	80138360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
WTC11_00028376	chr15	+	1642	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	-192	6	13	0	multi-exon	FALSE	canonical	3	126	junction_8	12.2879649592696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	80152567	False	NA	22	True	AATAAA	-26	NA	80152806	80186343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
WTC11_00028377	chr15	+	1489	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	-18	0	-4	0	multi-exon	FALSE	canonical	3	11	junction_1	37.4798585365309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	NA	False	NA	22	True	AATAAA	-26	NA	80152775	80186343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
WTC11_00028378	chr15	+	1786	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	1	365	1	214	multi-exon	FALSE	canonical	3	21	junction_1	35.0458154944848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCGATTTATTGATTGAT	80152541	True	NA	NA	False	AATAGA	-14	NA	80152780	80186581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
WTC11_00028379	chr15	+	1360	13	NIC	ENSG00000103876.14	novel	1456	14	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	40.8189600553468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCACTGCCGCAGATGC	80152964	False	NA	13	True	AATAAA	-17	NA	80152979	80186334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
WTC11_00028385	chr15	+	1942	3	FSM	ENSG00000259343.8	ENST00000664001.1	2234	3	93	199	-2	30	multi-exon	FALSE	canonical	3	16	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTTATGGTCGTGT	81324113	True	NA	NA	False	NA	NA	NA	81324435	81343180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_81324562_81332344_81332542_81341561
WTC11_00028390	chr15	+	600	2	FSM	ENSG00000259429.5	ENST00000561287.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGCTAAGCAT	NA	False	NA	NA	False	GATAAA	-19	NA	82414680	82416003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82414805_82415527
WTC11_00028391	chr15	+	387	5	FSM	ENSG00000259429.5	ENST00000558542.2	387	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.67423461417477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCCAGCAGTTTGGGAG	NA	False	NA	NA	False	AAAAAG	-1	NA	82414786	82419391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82414805_82415527_82415676_82418635_82418793_82419207_82419248_82419367
WTC11_00028392	chr15	+	6549	6	FSM	ENSG00000197978.10	ENST00000618706.1	6549	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	7.74596669241483	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGTCTTGAAAACT	NA	False	NA	27	True	ATTAAA	-30	NA	82430044	82439153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82432898_82433561_82433650_82434033_82434603_82434868_82434930_82435966_82436070_82436278
WTC11_00028393	chr15	+	224	1	FSM	ENSG00000278603.1	ENST00000617986.1	224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCCCTGACGAACACAGG	NA	False	NA	NA	False	NA	NA	NA	82472202	82472426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82472200_82472400
WTC11_00028395	chr15	+	1784	2	FSM	ENSG00000250988.7_ENSG00000277864.1	ENST00000558687.1	558	2	6	-1232	0	198	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATCAAGACCAATGTAGT	82749794	True	NA	NA	False	NA	NA	NA	82750571	82756269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82750715_82754628
WTC11_00028398	chr15	+	686	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	-12	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	24.6715929765388	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749794	True	NA	NA	False	AATAAA	-19	NA	82750571	82757206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
WTC11_00028403	chr15	+	1696	9	FSM	ENSG00000140600.17	ENST00000427482.7	1693	9	-7	4	-7	0	multi-exon	FALSE	canonical	3	102	junction_3	8.55496931613434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	83445604	True	NA	18	True	AATAAA	-20	NA	83447333	83618739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568528_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
WTC11_00028404	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	27.7668867538296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	83445646	True	NA	18	True	AATAAA	-20	NA	83447375	83618739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
WTC11_00028405	chr15	+	229	2	ISM	ENSG00000259404.6	ENST00000560401.5	1798	14	41413	3	8635	-3	3prime_fragment	FALSE	canonical	3	62	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTGATGCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	84121580	84126601	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_84121670_84126461
WTC11_00028406	chr15	+	441	3	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_2	31	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCAGAAGAAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	84443423	84468670	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_84443731_84468281_84468371_84468625
WTC11_00028409	chr15	+	1006	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	-13	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	53.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596796	True	NA	15	True	AATAAA	-25	NA	84601004	84606889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84601136_84603819_84604334_84606528
WTC11_00028410	chr15	+	3813	3	FSM	ENSG00000176371.14	ENST00000448803.6	3813	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596796	True	NA	16	True	AATAAA	-17	NA	84601004	84623716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84601189_84603819_84604334_84620601
WTC11_00028411	chr15	+	3760	3	FSM	ENSG00000176371.14	ENST00000546148.6	3756	3	-4	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596796	True	NA	16	True	AATAAA	-17	NA	84601004	84623716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84601136_84603819_84604334_84620601
WTC11_00028412	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	19.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596841	True	NA	20	True	AATAAA	-21	NA	84601049	84616614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84601136_84603819_84604334_84616308
WTC11_00028413	chr15	+	939	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTGCTTCCGAGCT	84596858	True	NA	17	True	AATAAA	-18	NA	84601066	84616611	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_84601189_84603819_84604334_84616308
WTC11_00028414	chr15	+	910	4	FSM	ENSG00000176371.14	ENST00000485222.2	910	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	49.0328687945364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	84603001	True	NA	17	True	AATAAA	-18	NA	84603900	84623717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84604334_84620601_84620773_84622645_84622715_84623480
WTC11_00028417	chr15	+	470	5	FSM	ENSG00000176700.21	ENST00000560543.5	470	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	8.57321409974112	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGTGCTAATCTGGAG	84634251	False	NA	NA	False	AAAAAG	-45	NA	84634261	84639640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84634382_84635851_84635913_84637346_84637421_84638395_84638478_84639507
WTC11_00028418	chr15	+	8463	10	NIC	ENSG00000166716.10	novel	8187	11	NA	NA	-288	118	intron_retention	FALSE	canonical	2	20	junction_2	36.0743402530297	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACATTATTCTCACAT	84748274	False	NA	NA	False	NA	NA	NA	84748303	84806563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_84748665_84764706_84764816_84782656_84784896_84790704_84790884_84797868_84798046_84798314_84798475_84798587_84798876_84799097_84799211_84799841_84799978_84801862
WTC11_00028422	chr15	+	5439	22	FSM	ENSG00000073417.15	ENST00000394553.6	4036	22	-1403	0	13	0	multi-exon	FALSE	canonical	3	20	junction_8	9.2194214800227	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTTATCATCTTTTT	84980046	True	NA	NA	False	ATTAAA	-19	NA	84980452	85139142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84982349_85064369_85064427_85067013_85067205_85075861_85075919_85076732_85076788_85083555_85083645_85089337_85089417_85091043_85091182_85097947_85098037_85100014_85100067_85100155_85100199_85109052_85109131_85113376_85113448_85113872_85114038_85115438_85115488_85115983_85116120_85117640_85117840_85120796_85121015_85123060_85123194_85126206_85126375_85136533_85136664_85137796
WTC11_00028428	chr15	+	13351	37	FSM	ENSG00000170776.22	ENST00000394518.7	13327	37	-24	0	8	0	multi-exon	FALSE	canonical	3	6	junction_12	13.7422256360496	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGCTGTGACTTA	85376718	True	NA	8	True	AATAAA	-15	NA	85380578	85749355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85658536_85658591_85664562_85664756_85669721_85669831_85682157_85682213_85684740_85684874_85693276_85693452_85708018_85708087_85710578_85710646_85715787_85715924_85717289_85717403_85718006_85718160_85719075_85719327_85721990_85722117_85722229_85722348_85723071_85723321_85726409_85726487_85727065_85727248_85727380_85727464_85730512_85730708_85734991_85735151_85735559_85735631_85736089_85736135_85740221_85740273_85741045_85741496_85743491_85743826_85744627
WTC11_00028434	chr15	+	3566	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	-285	-2515	-20	-2	multi-exon	FALSE	canonical	3	24	junction_2	103.151284529084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACTGTCTCTTAATC	88467408	True	NA	3	True	AATAAA	-16	NA	88467432	88480774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
WTC11_00028435	chr15	+	869	6	NIC	ENSG00000181991.16	novel	3392	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	131	junction_1	69.2774133466312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTTGAGATTTTTTG	88462479	True	NA	15	True	AATAAA	-17	NA	88467713	88478262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_88467783_88467910_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
WTC11_00028436	chr15	+	918	5	FSM	ENSG00000181991.16	ENST00000558406.5	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	27.0958945229716	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTGGCCTAGGCCCAA	88462501	True	NA	-42	True	NA	NA	NA	88467735	88478205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
WTC11_00028438	chr15	+	6060	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	-3	-2985	0	2985	multi-exon	TRUE	canonical	3	629	junction_1	41.0636362518253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATCTGTGGTACATATC	88610877	True	NA	NA	False	NA	NA	NA	88621336	88635266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
WTC11_00028439	chr15	+	894	2	FSM	ENSG00000181026.15	ENST00000558327.1	883	2	-11	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTACCATGGCAATGT	88610910	True	NA	NA	False	NA	NA	NA	88621369	88626611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88621798_88626145
WTC11_00028441	chr15	+	3323	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	302.269563285636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610910	True	NA	25	True	AATAAA	-18	NA	88621369	88632281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_88621664_88626145_88626750_88629225_88629427_88630057
WTC11_00028442	chr15	+	8024	2	FSM	ENSG00000181026.15	ENST00000557927.1	5039	2	0	-2985	0	2985	multi-exon	FALSE	canonical	3	651	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATCTGTGGTACATATC	88626580	False	NA	NA	False	NA	NA	NA	88626611	88635266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88629427_88630057
WTC11_00028446	chr15	+	469	3	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	7	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGACTGTGGGTCAT	88993064	True	NA	4	True	CATAAA	-14	NA	88993339	88997633	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_88993428_88994178_88994298_88997371
WTC11_00028447	chr15	+	8434	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	53	junction_6	5.76541412215983	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	89086238	True	NA	11	True	AATAAA	-14	NA	89088445	89202355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
WTC11_00028450	chr15	+	4702	37	FSM	ENSG00000140525.19	ENST00000300027.12	4713	37	11	0	11	0	multi-exon	FALSE	canonical	3	15	junction_23	109.028609338655	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAGTCAAGAGTGGA	89236494	True	NA	NA	False	TATAAA	-20	NA	89243959	89317261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
WTC11_00028454	chr15	+	4752	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	-19	0	11	0	multi-exon	TRUE	canonical	3	226	junction_1	75.7324401004262	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	89236494	True	NA	19	True	AATAAA	-16	NA	89243959	89317131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
WTC11_00028457	chr15	+	4104	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	78.4955973417955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCATTTTTACCCAA	89236538	True	NA	34	True	AATAAA	-34	NA	89244003	89316493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
WTC11_00028464	chr15	+	1111	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	-2	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	89335024	True	NA	NA	False	AATACA	-17	NA	89335050	89336161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89335000_89336200
WTC11_00028467	chr15	+	447	1	FSM	ENSG00000259677.1	ENST00000559166.1	746	1	409	-110	409	110	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTCTTCCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	89876948	89877395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89876900_89877400
WTC11_00028468	chr15	+	4681	5	FSM	ENSG00000140548.10	ENST00000268154.9	4676	5	-5	0	-5	0	multi-exon	TRUE	canonical	3	69	junction_1	1.22474487139159	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTGACTGCAAATGCT	90001236	True	NA	14	True	AATAAA	-14	NA	90001318	90082191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90001615_90067109_90068596_90073070_90073263_90074115_90074291_90079659
WTC11_00028472	chr15	+	3783	15	FSM	ENSG00000185033.15	ENST00000332496.10	3781	15	-12	10	-12	0	multi-exon	TRUE	canonical	3	26	junction_1	50.7892805659636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCTTCCTCTTCAA	90184254	True	NA	32	True	AATAAA	-22	NA	90184950	90229660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90185082_90201457_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
WTC11_00028473	chr15	+	3972	14	FSM	ENSG00000185033.15	ENST00000411539.7	3780	14	-192	0	-192	0	multi-exon	FALSE	canonical	3	170	junction_4	21.7162987899894	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCTTCCTCTTCAA	NA	False	NA	32	True	AATAAA	-22	NA	90201137	90229660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
WTC11_00028478	chr15	+	1362	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	-22	0	-9	0	multi-exon	FALSE	canonical	3	283	junction_1	713.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	NA	False	NA	11	True	AATAAA	-17	NA	90265649	90272211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90265877_90266287_90266399_90271187
WTC11_00028481	chr15	+	7205	38	FSM	ENSG00000140575.13	ENST00000268182.10	7205	38	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_19	44.5955118660781	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTTCTCAGTT	90377113	True	NA	28	True	AATAAA	-15	NA	90388241	90502239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712_90494836_90497231_90497341_90499994
WTC11_00028482	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	90377226	True	NA	9	True	AATAAA	-28	NA	90388354	90391932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90388397_90390773
WTC11_00028483	chr15	+	5222	15	FSM	ENSG00000140577.17	ENST00000268184.11	5214	15	-18	10	-18	4	multi-exon	FALSE	canonical	3	9	junction_14	4.28868944350802	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGCATTTGGTGGTG	90529473	True	NA	18	True	ATTAAA	-17	NA	90529904	90645335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90530204_90540038_90540138_90593635_90593756_90602323_90602386_90604384_90604448_90607377_90607479_90614452_90614489_90617882_90617969_90619740_90619791_90625775_90625994_90629233_90629533_90638445_90638647_90638734_90638816_90641096_90641200_90641931
WTC11_00028486	chr15	+	5236	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	4	0	4	0	multi-exon	FALSE	canonical	3	181	junction_9	27.5337764125703	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	90711422	True	NA	NA	False	AATAAA	-16	NA	90717349	90816166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
WTC11_00028487	chr15	+	3966	20	FSM	ENSG00000197299.13	ENST00000560509.5	3966	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	55.7326920576148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTATAAAGCTGTT	90711466	True	NA	-6	True	NA	NA	NA	90717393	90815333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90809136_90809260_90811204_90811407_90815101
WTC11_00028489	chr15	+	2894	8	FSM	ENSG00000197299.13	ENST00000560559.2	2967	8	636	-563	636	0	multi-exon	FALSE	canonical	3	215	junction_2	25.8993341652654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAGAGAATCGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	90789888	90815982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
WTC11_00028493	chr15	+	2327	17	FSM	ENSG00000182511.12	ENST00000414248.6	2327	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	12.1243556529821	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGTGTCCTCTCTGTGT	90883867	True	NA	-76	True	NA	NA	NA	90884446	90895693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90884545_90885036_90885259_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
WTC11_00028494	chr15	+	2737	19	FSM	ENSG00000182511.12	ENST00000328850.8	2737	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	10.6418983268964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	90883924	True	NA	7	True	AATAAA	-20	NA	90884503	90895776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
WTC11_00028498	chr15	+	503	4	FSM	ENSG00000196547.15	ENST00000558853.5	624	4	121	0	19	0	multi-exon	FALSE	canonical	0	0	junction_2	23.7954243967663	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCATTGAGCAGCTGG	90902191	True	NA	NA	False	NA	NA	NA	90902395	90905270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90902527_90903230_90903433_90904189_90904340_90905250
WTC11_00028500	chr15	+	6394	23	FSM	ENSG00000196547.15	ENST00000559717.6	6394	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3171677107043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTAGATGTGCAATGAAA	90903290	False	NA	3	True	AATAAA	-18	NA	90903301	90922579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
WTC11_00028510	chr15	+	3210	20	ISM	ENSG00000140553.18	ENST00000672480.1	4002	23	5102	0	-3	0	3prime_fragment	TRUE	canonical	3	114	junction_1	49.8691362259508	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	90927002	True	NA	26	True	AATAAA	-17	NA	90935281	90954093	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
WTC11_00028514	chr15	+	2706	8	FSM	ENSG00000166965.13	ENST00000394258.7	2675	8	-31	0	-28	0	multi-exon	FALSE	canonical	3	33	junction_1	34.3130843134516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATAGTTCAGTGACATT	90954833	False	NA	25	True	AATAAA	-29	NA	90954852	90963125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90954949_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
WTC11_00028519	chr15	+	478	1	FSM	ENSG00000278514.1	ENST00000620171.1	435	1	-126	83	-126	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTCAAAAAAATGGCAAAG	91022617	True	NA	NA	False	NA	NA	NA	91022639	91023117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_91022600_91023100
WTC11_00028521	chr15	+	2578	11	FSM	ENSG00000176463.14	ENST00000424469.2	2705	11	0	127	0	-127	multi-exon	TRUE	canonical	3	5	junction_10	17.3712406004868	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAGTGTGGTACTCTG	91853838	False	NA	NA	False	AATAGA	-1	NA	91853855	92172308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755_92162999_92171779
WTC11_00028523	chr15	+	272	1	FSM	ENSG00000258925.2	ENST00000557228.2	838	1	12	554	12	-554	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTTACGGTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	92285852	92286124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92285900_92286100
WTC11_00028527	chr15	+	2683	5	FSM	ENSG00000272888.8	ENST00000557682.6	2683	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	146.443461786452	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGCTCCAGTGCAAC	92876383	True	NA	NA	False	AATAAA	-14	NA	92882706	92899701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
WTC11_00028529	chr15	+	589	3	FSM	ENSG00000272888.8	ENST00000554669.6	577	3	-12	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	12	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTGGGTTAATTTTT	92882826	False	NA	NA	False	NA	NA	NA	92882861	92885584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92883187_92883584_92883779_92885514
WTC11_00028531	chr15	+	490	4	FSM	ENSG00000272888.8	ENST00000557147.1	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	289.137030181577	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGGGAAAGTCAGTAT	92882979	False	NA	NA	False	GATAAA	-5	NA	92883014	92886222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92883187_92883584_92883779_92885514_92885585_92886168
WTC11_00028536	chr15	+	9485	39	FSM	ENSG00000173575.22	ENST00000394196.9	9350	39	-135	0	0	0	multi-exon	TRUE	canonical	3	12	junction_17	9.68767815491622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTAACACGTTGCATT	92900166	False	NA	41	True	ATTAAA	-25	NA	92900188	93027996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011_93020259_93024371
WTC11_00028537	chr15	+	1740	2	FSM	ENSG00000173575.22	ENST00000627622.1	1740	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGTGATTCATTATG	92895049	True	NA	NA	False	TATAAA	-21	NA	92900320	92902402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92900825_92901166
WTC11_00028538	chr15	+	2235	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	-3	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.7723691511805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	92895049	True	NA	8	True	AATAAA	-17	NA	92900320	92949234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
WTC11_00028547	chr15	+	406	2	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	235	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCATAGCTTCCAGTTT	NA	False	NA	NA	False	NA	NA	NA	96871876	96877664	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_96872024_96877405
WTC11_00028549	chr15	+	1307	2	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGATAAGGGTGGGG	96875905	False	NA	NA	False	NA	NA	NA	96875930	96877321	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_96876462_96876545
WTC11_00028550	chr15	+	1265	2	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGATAAGGGTGGGG	96875989	False	NA	NA	False	NA	NA	NA	96876014	96877321	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_96876546_96876587
WTC11_00028553	chr15	+	715	1	FSM	ENSG00000242863.3	ENST00000466970.3	319	1	-504	108	-504	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCCCGTGCTGATCAA	NA	False	NA	NA	False	NA	NA	NA	97352992	97353707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_97353000_97353700
WTC11_00028554	chr15	+	4086	8	FSM	ENSG00000140450.9	ENST00000268042.7	4062	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	75	junction_1	11.1721227405812	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGAGGTGCTAGTTTT	97959640	True	NA	8	True	AATAAA	-14	NA	97960678	97973833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_97961169_97965599_97965667_97965894_97966043_97968013_97968117_97969122_97969380_97969882_97970046_97970588_97970744_97971130
WTC11_00028561	chr15	+	7336	4	FSM	ENSG00000182253.15	ENST00000336292.11	7353	4	11	6	11	4	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACATTGTTCCTAAAG	99104983	False	NA	NA	False	AATAAA	-14	NA	99105090	99135587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99106010_99113590_99113716_99126721_99126793_99129366
WTC11_00028564	chr15	+	1373	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	23.9361128840921	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCATTTGTCTTCTGTGT	99249960	True	NA	11	True	AATATA	-18	NA	99251483	99386294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
WTC11_00028566	chr15	+	2082	1	FSM	ENSG00000259706.1	ENST00000559111.1	2384	1	68	234	68	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGATTCGGTCAGGAT	99257689	False	NA	NA	False	GATAAA	-44	NA	99257699	99259781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99257700_99259800
WTC11_00028573	chr15	+	1350	8	ISM	ENSG00000068305.18	ENST00000686611.1	3192	12	-51	23576	-4	18999	5prime_fragment	FALSE	canonical	3	33	junction_4	64.1659201299448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTATTTGAAGAGACAAG	99561192	True	NA	7	True	AATAAA	-16	NA	99565975	99690561	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671519_99671658_99674392_99674613_99675398_99675459_99690240
WTC11_00028574	chr15	+	2412	9	NNC	ENSG00000068305.18	novel	2854	11	NA	NA	17	-17324	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	45.1774279923061	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGGGAGGGAGGAATT	99561161	True	NA	2	True	AATAAA	-14	NA	99565944	99695245	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99694075
WTC11_00028575	chr15	+	5492	12	NNC	ENSG00000068305.18	novel	5580	12	NA	NA	17	0	intron_retention	FALSE	non_canonical	3	37	junction_11	48.0099851873123	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAGACAATGCTAAAG	99561161	True	NA	15	True	AATAAA	-25	NA	99565944	99716406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389_99712505_99712525
WTC11_00028576	chr15	+	5413	12	FSM	ENSG00000068305.18	ENST00000557942.6	5580	12	103	64	60	18	multi-exon	FALSE	canonical	3	5	junction_9	66.5611009921655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGTTGTAAACTGTTTG	99561303	True	NA	33	True	AATAAA	-43	NA	99566086	99716424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99703361_99703386_99706728_99706856_99710633_99710761_99712389
WTC11_00028580	chr15	+	4943	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	52	junction_2	5.41848687365763	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	100601311	True	NA	18	True	ATTAAA	-22	NA	100602571	100651701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
WTC11_00028587	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	101953192	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_101961642_101966069_101966224_101966521
WTC11_00028589	chr15	+	1679	10	FSM	ENSG00000185596.16	ENST00000557932.5	1679	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	76.0727397192651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGGCACACCAATCAATAA	101966038	False	NA	NA	False	NA	NA	NA	101966051	101976528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_101966224_101972582_101972695_101972900_101973048_101973219_101973353_101973591_101973728_101973904_101974107_101974194_101974354_101975012_101975166_101975923_101975993_101976132
WTC11_00028590	chr15	+	1580	9	NNC	ENSG00000185596.16	novel	1644	10	NA	NA	0	62	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	77.259202526301	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	101966061	False	NA	NA	False	AATAAA	-21	NA	101966074	101976605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_101966224_101972595_101972695_101972900_101973048_101973219_101973353_101973904_101974103_101974194_101974354_101975012_101975166_101975923_101975993_101976132
WTC11_00028591	chr15	-	825	3	ISM	ENSG00000180229.12	ENST00000429257.5	4088	26	67638	-7	2846	7	3prime_fragment	FALSE	canonical	3	118	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGCCTTGACAGTTTT	NA	False	NA	NA	False	GATAAA	-20	NA	20437824	20431085	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20431236_20435848_20435993_20437293
WTC11_00028592	chr15	-	1044	6	ISM	ENSG00000180229.12	ENST00000429257.5	4088	26	61047	7540	-3745	64	internal_fragment	TRUE	canonical	2	3	junction_1	40.551202201661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGACGTGTCACGTTTGC	NA	False	NA	NA	False	NA	NA	NA	20444415	20438632	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226
WTC11_00028593	chr15	-	555	2	FSM	ENSG00000180229.12	ENST00000454045.1	583	2	28	0	28	0	multi-exon	FALSE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCAGAGGTGGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	20440642	20439269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20439656_20440473
WTC11_00028594	chr15	-	2534	17	ISM	ENSG00000180229.12	ENST00000428453.5	4383	27	-7	62743	3	-1555	5prime_fragment	FALSE	canonical	3	52	junction_1	54.4434554721686	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAGAGATTTGATGTGA	-20506119	True	NA	NA	False	NA	NA	NA	20506168	20445857	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20483402_20483518_20505390_20505494_20506107
WTC11_00028596	chr15	-	479	5	FSM	ENSG00000180229.12	ENST00000414804.5	522	5	43	0	33	0	multi-exon	FALSE	canonical	2	12	junction_2	76.6921606163237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCACGCATTTTGTGTT	-20506079	True	NA	NA	False	NA	NA	NA	20506128	20462377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20462447_20462830_20463002_20483402_20483518_20505390_20505494_20506107
WTC11_00028598	chr15	-	662	1	FSM	ENSG00000281087.1	ENST00000625294.1	622	1	3	-43	3	43	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTGTTCCAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	21710267	21709605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_21709600_21710300
WTC11_00028600	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_28	37.0822059753731	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-22973099	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
WTC11_00028601	chr15	-	1009	4	FSM	ENSG00000273749.5	ENST00000561263.2	707	4	0	-302	0	302	multi-exon	FALSE	canonical	3	416	junction_3	24.4994331000173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCAGTTTTCTTTTTTC	-22875207	False	NA	NA	False	NA	NA	NA	22875235	22872334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22872973_22873490_22873730_22874549_22874645_22875198
WTC11_00028603	chr15	-	582	6	FSM	ENSG00000273749.5	ENST00000611832.4	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	130.833329087049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTCAGAAGCCTACCT	-22973113	True	NA	NA	False	NA	NA	NA	22980382	22943288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947319_22980286
WTC11_00028604	chr15	-	3805	23	NNC	ENSG00000275835.5	novel	3342	22	NA	NA	-48	7500	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	30.4754677114463	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCCTTTTGATTATT	NA	False	NA	-1	True	AATAAA	-15	NA	23039620	22991676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_22992374_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027310_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
WTC11_00028605	chr15	-	3819	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	-75	0	75	multi-exon	FALSE	canonical	3	78	junction_1	13.2861855802456	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTCTTAGATGTAGCT	NA	False	NA	75	True	NA	NA	NA	23039569	22999101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
WTC11_00028606	chr15	-	3342	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	12.4492621060096	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGTGTAGTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-34	NA	23039572	23000283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
WTC11_00028608	chr15	-	1538	2	ISM	ENSG00000259414.1	ENST00000559033.1	726	4	2759	-1293	2759	1293	3prime_fragment	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGGTTTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	23290908	23288009	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_23289476_23290836
WTC11_00028609	chr15	-	4324	1	FSM	ENSG00000254585.5	ENST00000650528.1	4319	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTCTTTATTCTAAT	-23647071	True	NA	2	True	AGTAAA	-44	NA	23647867	23643543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23643500_23647900
WTC11_00028610	chr15	-	1932	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	-30	4	-30	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTCCTTCCCTTAAGT	-23682182	True	NA	NA	False	AATAAA	-9	NA	23687335	23685403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23685400_23687300
WTC11_00028612	chr15	-	639	1	FSM	ENSG00000279735.2	ENST00000638703.1	417	1	-246	24	-246	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAAGTGGACCCCATC	NA	False	NA	NA	False	NA	NA	NA	25092623	25091984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25092000_25092600
WTC11_00028613	chr15	-	8777	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	30	-79	0	79	multi-exon	FALSE	canonical	3	147	junction_10	123.619347415991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTCCAGTTTGGGGATG	-25435719	True	NA	79	True	NA	NA	NA	25438994	25333648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
WTC11_00028614	chr15	-	5523	14	NIC	ENSG00000114062.22	novel	9131	17	NA	NA	1	221	combination_of_known_splicesites	FALSE	canonical	3	13	junction_13	171.962704089094	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAATTATGCCGGGCAT	-25435709	True	NA	50	True	NA	NA	NA	25438984	25337025	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25415709_25415843_25438488
WTC11_00028615	chr15	-	5075	14	FSM	ENSG00000114062.22	ENST00000630424.2	5075	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	163.655179421488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25438674	False	3275	-23	True	AATAAA	-13	NA	25438694	25337246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407263_25409087_25409208_25411907_25411972_25438488
WTC11_00028616	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	88.5146315588558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25435749	True	NA	-23	True	AATAAA	-13	NA	25439024	25337246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
WTC11_00028617	chr15	-	8975	14	FSM	ENSG00000114062.22	ENST00000650110.1	5274	14	25	-3726	0	207	multi-exon	TRUE	canonical	3	13	junction_10	168.983210538168	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGGACACAGGGATGGT	-25435724	True	NA	NA	False	NA	NA	NA	25438999	25333520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25408619_25408685_25409087_25409208_25411907_25411972_25438488
WTC11_00028625	chr15	-	2951	9	FSM	ENSG00000206190.13	ENST00000673805.1	4450	9	1499	0	1499	0	multi-exon	FALSE	canonical	1	3	junction_2	2.57087047515039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAACTTTCACTTTG	NA	False	NA	-27	True	NA	NA	NA	25702521	25678735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25679975_25680120_25680309_25680809_25680915_25680993_25681075_25683285_25683487_25687702_25687829_25691714_25691792_25694818_25695147_25701915
WTC11_00028626	chr15	-	2999	10	FSM	ENSG00000206190.13	ENST00000673747.1	2999	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	6.99382443638054	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTGCACACCCCCAC	-25863539	False	NA	NA	False	NA	NA	NA	25863551	25713473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25714242_25716729_25716925_25718181_25718400_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
WTC11_00028627	chr15	-	5670	7	FSM	ENSG00000166206.15	ENST00000400188.7	1900	7	-43	-3727	-43	84	multi-exon	FALSE	canonical	3	92	junction_6	343.437241557885	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGTTATGCTGAAAG	-26628834	True	NA	80	True	NA	NA	NA	26629133	26543461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26628976
WTC11_00028628	chr15	-	5857	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	0	-90	0	84	multi-exon	FALSE	canonical	3	874	junction_1	75.8649087193809	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGTTATGCTGAAAG	-26773020	False	2952	80	True	NA	NA	NA	26773066	26543461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
WTC11_00028629	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_8	277.973441851915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	-26770836	True	NA	-19	True	AATAAA	-13	NA	26773788	26544784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
WTC11_00028630	chr15	-	340	1	FSM	ENSG00000278840.1	ENST00000621819.1	340	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGACTTTAGTGATAAT	-26557874	False	NA	-5	True	ATTAAA	-18	NA	26557937	26557597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26557600_26557900
WTC11_00028631	chr15	-	15282	93	NNC	ENSG00000128731.18	novel	15364	93	NA	NA	0	59444	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.4602125783512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGCCAGGCGCAGTGGC	NA	False	NA	NA	False	ATTAAA	-25	NA	28322179	28051595	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_28051623_28111039_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
WTC11_00028632	chr15	-	15367	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	1	-4	1	4	multi-exon	FALSE	canonical	3	30	junction_88	51.7251294081256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGAGCTTTCTTAACCA	NA	False	NA	NA	False	AATAAA	-20	NA	28322178	28111035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
WTC11_00028640	chr15	-	815	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	-324	0	324	multi-exon	TRUE	canonical	3	73	junction_1	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAACATGAGTTCTAGT	NA	False	NA	-30	True	AATAAA	-32	NA	28322119	28319797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28320465_28321361_28321465_28322074
WTC11_00028642	chr15	-	5069	12	NNC	ENSG00000104059.5	novel	4963	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	15.8275834129603	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCTGAGGTCTAA	NA	False	NA	0	True	AATAAA	-18	NA	29570976	29120251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29195111_29195221_29196429_29196565_29252367_29252479_29381774_29381832_29570504
WTC11_00028644	chr15	-	4804	10	NIC	ENSG00000104059.5	novel	4963	11	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	10.9488146942889	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTCTCTGAGGTCT	NA	False	NA	-2	True	AATAAA	-16	NA	29570957	29120253	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29252367_29252479_29381774_29381832_29570504
WTC11_00028645	chr15	-	1168	6	NNC	ENSG00000104059.5	novel	533	4	NA	NA	17	3278	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	19.1895805060976	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAATCTGGATGCCC	NA	False	NA	-13	True	AATAAA	-8	NA	29570962	29193151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_29193331_29195111_29195340_29196429_29196565_29252367_29252479_29381774_29381832_29570504
WTC11_00028646	chr15	-	4716	1	FSM	ENSG00000185115.6	ENST00000332303.6	4834	1	-4	122	-4	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCCTTCAGTCCTAGCT	NA	False	NA	NA	False	TATAAA	-23	NA	29269826	29265110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29265100_29269800
WTC11_00028647	chr15	-	7949	28	FSM	ENSG00000104067.17	ENST00000346128.10	7950	28	1	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	162.161175728287	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTTTGAGTCTGGCT	NA	False	NA	1	True	TATAAA	-16	NA	29822502	29699366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
WTC11_00028648	chr15	-	6911	27	NIC	ENSG00000104067.17	novel	7190	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	274	junction_1	89.1939579241639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTTGGTCTGTTTG	NA	False	NA	-31	True	AATAAA	-16	NA	29822468	29700151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_29701690_29704200_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
WTC11_00028649	chr15	-	7190	28	FSM	ENSG00000104067.17	ENST00000614355.5	7190	28	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	162.470949181219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTTGGTCTGTTTG	NA	False	NA	-31	True	AATAAA	-16	NA	29822468	29700151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
WTC11_00028650	chr15	-	7764	27	FSM	ENSG00000104067.17	ENST00000677774.1	5938	27	-424	-1402	1	-4	multi-exon	FALSE	canonical	3	227	junction_1	94.9243314341737	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGCCTTTGAGTCT	NA	False	NA	-3	True	TATAAA	-12	NA	29822501	29699370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
WTC11_00028651	chr15	-	7703	27	FSM	ENSG00000104067.17	ENST00000545208.6	5007	27	-473	-2223	1	-5	multi-exon	FALSE	canonical	3	232	junction_1	94.2900912173445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATGTTGCCTTTGAGTC	NA	False	NA	-4	True	TATAAA	-11	NA	29822501	29699371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
WTC11_00028654	chr15	-	2894	6	ISM	ENSG00000166664.15	ENST00000299847.7	3411	10	16430	-7	-3853	7	3prime_fragment	FALSE	canonical	3	16	junction_4	2.93938769133981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCATTTCTGGGTAATGC	NA	False	NA	NA	False	AATAAA	-29	NA	30377110	30360558	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029
WTC11_00028655	chr15	-	331	1	FSM	ENSG00000260382.1	ENST00000561684.1	965	1	698	-64	698	64	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAGGGTGGGTGGATT	NA	False	NA	NA	False	NA	NA	NA	30882533	30882202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30882200_30882500
WTC11_00028656	chr15	-	5686	14	FSM	ENSG00000166912.17	ENST00000568604.5	5679	14	0	-7	0	0	multi-exon	FALSE	canonical	2	2	junction_9	17.3092307008608	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-30991591	False	NA	-21	True	AATAAA	-18	NA	30991603	30938940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
WTC11_00028657	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	9.88736567544662	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-30991616	False	NA	-21	True	AATAAA	-18	NA	30991628	30938940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
WTC11_00028660	chr15	-	2172	15	NIC	ENSG00000166912.17	novel	2216	15	NA	NA	-6	-53	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.4957720840301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATATGAATTATTCTGGA	-30991601	False	NA	NA	False	NA	NA	NA	30991613	30946262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_30946780_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
WTC11_00028661	chr15	-	10941	13	FSM	ENSG00000169918.10	ENST00000307050.6	10964	13	0	23	0	-23	multi-exon	FALSE	canonical	0	0	junction_12	8.04285397107271	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAACATGTTTGTAAA	-31870390	True	NA	NA	False	NA	NA	NA	31870673	31475420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_31484725_31487193_31487279_31487451_31487567_31501689_31501840_31503690_31503819_31526348_31526462_31527180_31527309_31530706_31530809_31558968_31559188_31570017_31570198_31655095_31655251_31656982_31657078_31870506
WTC11_00028662	chr15	-	844	6	FSM	ENSG00000169918.10	ENST00000558371.5	1630	6	0	786	0	-786	multi-exon	FALSE	canonical	2	10	junction_2	9.38083151964686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGCCCCTGCCAGCA	-31870295	False	NA	NA	False	NA	NA	NA	31870578	31558968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_31559188_31570017_31570198_31655095_31655251_31656982_31657078_31689358_31689482_31870506
WTC11_00028663	chr15	-	276	2	FSM	ENSG00000223509.8	ENST00000567237.1	439	2	0	163	0	-163	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTTTATATTTAAGTA	NA	False	NA	NA	False	TATAAA	-3	NA	32528641	32526812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_32526979_32528531
WTC11_00028664	chr15	-	249	1	FSM	ENSG00000276702.1	ENST00000621310.1	641	1	383	9	383	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATAGCTATTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	33850795	33850546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_33850500_33850800
WTC11_00028665	chr15	-	2518	3	FSM	ENSG00000259408.2	ENST00000560404.2	964	3	-1554	0	-1554	0	multi-exon	FALSE	canonical	3	5	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATACCTCCTTTCTCTTA	-33858345	False	NA	-3	True	AATAAA	-36	NA	33858363	33851784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_33852147_33854840_33854946_33856312
WTC11_00028666	chr15	-	1634	6	FSM	ENSG00000169857.9	ENST00000306730.8	1633	6	0	-1	0	1	multi-exon	FALSE	canonical	3	107	junction_5	13.7317151150175	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTTCCTTTCTTGTG	-34036963	True	NA	-2	True	AATAAA	-20	NA	34039204	33866225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_33866729_33867494_33867856_33870934_33871031_33875924_33875996_34003031_34003210_34038779
WTC11_00028667	chr15	-	1088	6	NNC	ENSG00000134153.10	novel	1069	5	NA	NA	0	10027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.412448435425	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAAAGAAA	-34093620	True	NA	NA	False	NA	NA	NA	34101862	34073989	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34074017_34084024_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
WTC11_00028668	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	29.7405447159261	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	-34093620	True	NA	3	True	ATTAAA	-23	NA	34101862	34084016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
WTC11_00028671	chr15	-	363	1	FSM	ENSG00000243094.1	ENST00000487972.1	404	1	21	20	21	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACAGTGAGGAAAAGGAA	-34086266	False	NA	NA	False	NA	NA	NA	34086293	34085930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34085900_34086300
WTC11_00028672	chr15	-	2743	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	-3	0	3	multi-exon	FALSE	canonical	3	298	junction_4	33.5592345297419	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTATCACTGTCTTA	-34207115	True	NA	2	True	GATAAA	-26	NA	34210096	34140670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
WTC11_00028676	chr15	-	924	5	FSM	ENSG00000134152.11	ENST00000560671.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	10.3531396204243	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGAGCTC	-34207080	True	NA	NA	False	TTTAAA	-42	NA	34210061	34148389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
WTC11_00028677	chr15	-	855	6	FSM	ENSG00000134152.11	ENST00000560108.5	853	6	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_5	165.917569895415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGTAGCTTATTTGT	-34207098	True	NA	NA	False	NA	NA	NA	34210079	34148655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
WTC11_00028679	chr15	-	7286	25	FSM	ENSG00000140199.13	ENST00000290209.9	7286	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.51261180284708	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGGTTATGGTATAGT	-34318097	True	NA	-6	True	AATAAA	-20	NA	34318779	34229995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238402_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34318560
WTC11_00028681	chr15	-	326	2	FSM	ENSG00000140199.13	ENST00000559076.1	632	2	0	306	0	91	multi-exon	FALSE	canonical	3	32	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTCCCCCATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	34238396	34237389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34237551_34238231
WTC11_00028684	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	6080	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321083	True	NA	-25	True	ATTAAA	-20	NA	34343136	34341718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34342109_34343019
WTC11_00028685	chr15	-	2140	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	25	0	-25	multi-exon	FALSE	canonical	3	141	junction_3	28.9173480414695	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCTCATTAAAGATTAAA	-34365462	True	NA	NA	False	NA	NA	NA	34367196	34358657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
WTC11_00028686	chr15	-	2351	2	ISM	ENSG00000176454.15	ENST00000563748.5	1357	5	1110	0	1110	0	intron_retention	FALSE	canonical	3	264	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34361535	False	NA	NA	False	ATTAAA	-15	NA	34361545	34358908	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34359303_34359588
WTC11_00028687	chr15	-	1361	5	FSM	ENSG00000176454.15	ENST00000563748.5	1357	5	0	-4	0	4	multi-exon	FALSE	canonical	3	141	junction_2	44.2627100390385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATGTTACCATTACTT	-34362645	False	NA	NA	False	ATTAAA	-19	NA	34362655	34358904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34359303_34359588_34360210_34361399_34361533_34362195_34362322_34362572
WTC11_00028688	chr15	-	672	5	FSM	ENSG00000176454.15	ENST00000567507.1	672	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	93.8669270829721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCGCTAGGGGCCTCCC	-34362645	False	NA	NA	False	NA	NA	NA	34362655	34359095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34362195_34362322_34362572
WTC11_00028690	chr15	-	577	2	FSM	ENSG00000176454.15	ENST00000562404.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGTGAGTGCCCCACA	-34363730	False	NA	NA	False	NA	NA	NA	34363740	34362578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34362837_34363421
WTC11_00028691	chr15	-	1349	1	FSM	ENSG00000176454.15	ENST00000623384.1	1349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAG	-34365945	False	NA	NA	False	AATACA	-19	NA	34365955	34364606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34364600_34366000
WTC11_00028692	chr15	-	6233	23	FSM	ENSG00000175265.18	ENST00000473125.5	6233	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	34.1112969338956	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTTTGCCTTAAAA	NA	False	NA	-16	True	AATAAA	-19	NA	34407687	34379067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34387953_34389643_34389769_34391122_34391266_34391352_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523
WTC11_00028693	chr15	-	5772	25	FSM	ENSG00000175265.18	ENST00000359187.5	5777	25	0	5	0	-2	multi-exon	FALSE	canonical	3	15	junction_14	37.9168498164075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGTGCTGTTTTTGCCT	-34436990	True	NA	-21	True	AATAAA	-14	NA	34437808	34379072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34386742_34387832_34387953_34389643_34389769_34391122_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523_34407736_34435382_34435472_34437397
WTC11_00028694	chr15	-	274	1	FSM	ENSG00000259917.1	ENST00000568980.1	1570	1	1065	231	1065	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGAGGAGAACTTCTTTG	-34489380	False	NA	NA	False	NA	NA	NA	34489506	34489232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34489200_34489500
WTC11_00028695	chr15	-	306	1	FSM	ENSG00000259917.1	ENST00000568980.1	1570	1	609	655	609	-655	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCCGAGTATGGCCC	-34489836	False	NA	NA	False	NA	NA	NA	34489962	34489656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34489700_34490000
WTC11_00028699	chr15	-	1390	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	-8	0	8	multi-exon	FALSE	canonical	3	45	junction_6	18.9443629845104	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTTTGTTTTTGGGGTA	-34794766	True	NA	NA	False	AATAAA	-31	NA	34795549	34790221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
WTC11_00028700	chr15	-	9598	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	-1	0	1	multi-exon	TRUE	canonical	3	352	junction_24	42.1609722119245	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCTTTCTGTTCTT	-34961651	True	NA	1	True	AGTAAA	-22	NA	34969742	34851780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
WTC11_00028703	chr15	-	5473	4	NNC	ENSG00000198146.4	novel	5439	3	NA	NA	0	47525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	725.802085052576	601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCGTATAAAAAAGTATC	-34977698	True	NA	NA	False	AAAAAG	-3	NA	34988287	34930815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34930850_34978340_34983491_34987556_34987674_34988115
WTC11_00028706	chr15	-	2096	1	FSM	ENSG00000255192.6	ENST00000528386.4	1886	1	0	-210	0	210	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCACATCTTGCACCGG	NA	False	NA	64	True	AGTAAA	-43	NA	35085295	35083199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35083200_35085300
WTC11_00028707	chr15	-	607	1	FSM	ENSG00000259592.1	ENST00000561466.1	512	1	-134	39	-134	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTGAAGGGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	35122218	35121611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35121600_35122200
WTC11_00028708	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_1	29.6497786669648	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	-35544084	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
WTC11_00028709	chr15	-	1007	1	FSM	ENSG00000236914.4	ENST00000560198.1	942	1	-99	34	-68	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCGGTAAACAAAAAGATCC	-38073039	False	NA	NA	False	NA	NA	NA	38073058	38072051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_38072100_38073100
WTC11_00028710	chr15	-	5036	17	FSM	ENSG00000172575.13	ENST00000310803.10	5031	17	0	-5	0	5	multi-exon	FALSE	canonical	2	3	junction_7	3.32544639860576	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTGTGTTTCTTCTGC	-38564644	True	NA	4	True	GATAAA	-26	NA	38564814	38488097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_38490689_38494381_38494768_38498793_38498947_38500102_38500140_38501142_38501288_38502311_38502422_38503271_38503377_38505839_38505921_38507725_38508002_38511603_38511721_38512782_38512957_38516196_38516351_38518291_38518424_38519308_38519372_38526298_38526405_38559820_38560006_38564593
WTC11_00028711	chr15	-	422	1	FSM	ENSG00000278621.1	ENST00000616754.1	526	1	-66	170	-66	-170	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTAAGAAGATGAACCAC	NA	False	NA	NA	False	NA	NA	NA	39588948	39588526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39588500_39588900
WTC11_00028712	chr15	-	2685	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	131	0	87	multi-exon	FALSE	canonical	2	4	junction_7	2.60958183534679	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAAAATTTTGTGTTGA	-39782677	True	NA	NA	False	NA	NA	NA	39782841	39600161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
WTC11_00028713	chr15	-	4721	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-683	379	combination_of_known_splicesites	FALSE	canonical	3	209	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCCCACACTGACTAGC	-39920921	False	NA	NA	False	TTTAAA	-3	NA	39920949	39798628	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_39802255_39919854
WTC11_00028714	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	35	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-39914110	True	NA	NA	False	AATAAA	-28	NA	39920266	39799007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39802255_39807005_39807259_39919854
WTC11_00028716	chr15	-	692	5	FSM	ENSG00000140319.11	ENST00000559475.5	463	5	0	-229	0	-33	multi-exon	FALSE	canonical	3	51	junction_3	4052.09361781043	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAAGCTATCATTAAAC	-39967488	False	NA	-58	True	ATTAAA	-24	NA	40038948	40036074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40036501_40036985_40037019_40037308_40037356_40038281_40038395_40038875
WTC11_00028717	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	7515	junction_4	758.788961108423	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-39967721	True	NA	42	True	NA	NA	NA	40039181	40035689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
WTC11_00028718	chr15	-	578	4	FSM	ENSG00000140319.11	ENST00000559081.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	7515	junction_3	829.382099316513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTGCAGAAGCTGCTA	-39967693	True	NA	NA	False	NA	NA	NA	40039153	40036687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40037019_40038281_40038395_40038875_40038949_40039092
WTC11_00028719	chr15	-	4653	5	NIC	ENSG00000104081.14	novel	4692	5	NA	NA	9	0	intron_retention	FALSE	canonical	2	5	junction_4	18.1521348606713	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	-40107842	True	NA	0	True	AATAAA	-16	NA	40108869	40087889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108358_40108772
WTC11_00028720	chr15	-	4510	4	NNC	ENSG00000104081.14	novel	4545	4	NA	NA	35	1	intron_retention	FALSE	canonical	1	1	junction_3	22.7596133534821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGGTCTTTTATTTTTC	-40105583	False	1027	-2	True	AATAAA	-14	NA	40106610	40087891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_40091889_40104179_40104341_40105794_40106092_40106555
WTC11_00028721	chr15	-	288	1	FSM	ENSG00000176753.5	ENST00000559727.1	1194	1	100	806	41	-806	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCAGCGCCGGCTTCAC	-40252850	True	NA	NA	False	NA	NA	NA	40252869	40252581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40252600_40252900
WTC11_00028722	chr15	-	306	1	FSM	ENSG00000273855.1	ENST00000622487.1	442	1	36	100	36	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGCTCTGGGGCGGG	-40285859	False	NA	NA	False	NA	NA	NA	40285873	40285567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40285600_40285900
WTC11_00028725	chr15	-	1447	4	NIC	ENSG00000137841.12	novel	4643	29	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_2	33.95094500403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	-40290996	True	NA	-10	True	ATTAAA	-17	NA	40291353	40287908	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40288919_40289271_40289359_40290576_40290838_40291264
WTC11_00028728	chr15	-	432	4	FSM	ENSG00000137841.12	ENST00000561378.1	553	4	0	121	0	-121	multi-exon	FALSE	canonical	3	19	junction_3	7.58653778449403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCCGAGTCCCAGGCTC	-40293535	False	NA	NA	False	GGGGCT	-39	NA	40293622	40291994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40292159_40292338_40292444_40292925_40293026_40293559
WTC11_00028729	chr15	-	520	4	FSM	ENSG00000137841.12	ENST00000560093.1	563	4	43	0	43	0	multi-exon	FALSE	canonical	3	19	junction_1	3.39934634239519	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAAACCCCCTGACGAG	-40299121	False	NA	NA	False	NA	NA	NA	40299246	40298293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40298381_40298561_40298709_40298797_40298965_40299127
WTC11_00028730	chr15	-	1509	4	FSM	ENSG00000128891.16	ENST00000416810.7	1509	4	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_2	4.18993502999218	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-40563762	True	NA	-4	True	TATAAA	-17	NA	40565042	40553098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564975
WTC11_00028731	chr15	-	557	4	FSM	ENSG00000128891.16	ENST00000559103.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.6624996744283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGCCAGCAGCCGGG	-40563734	True	NA	NA	False	NA	NA	NA	40565014	40554017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40554128_40557215_40557373_40562771_40563023_40564975
WTC11_00028732	chr15	-	3291	1	Genic_Genomic	ENSG00000245849.8	novel	NA	NA	NA	NA	5642	22	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCC	-40688437	False	NA	-4	True	TTTAAA	-6	NA	40689451	40686160	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_-_40686200_40689500
WTC11_00028735	chr15	-	2121	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	4	0	intron_retention	TRUE	canonical	3	27	junction_12	40.8400504679196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTATTCTTACTTGAC	-40752475	True	NA	-14	True	AATAAA	-19	NA	40755242	40735883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
WTC11_00028736	chr15	-	2344	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	-98	0	95	multi-exon	FALSE	canonical	3	115	junction_12	20.4944098069043	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTATCGAGCTTATTTT	-40752487	True	NA	81	True	TATAAA	-3	NA	40755254	40735788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
WTC11_00028737	chr15	-	2542	12	FSM	ENSG00000137824.16	ENST00000260385.10	3138	12	596	0	-1	0	multi-exon	FALSE	canonical	3	141	junction_7	16.1122098355602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTATTCTTACTTGAC	-40752488	True	NA	-14	True	AATAAA	-19	NA	40755255	40735883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596
WTC11_00028739	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	12.1692234756372	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-40802711	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
WTC11_00028740	chr15	-	792	9	FSM	ENSG00000104129.10	ENST00000559310.3	792	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	75.396348552168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGCGGTGAGTGCTGC	-40802695	True	NA	NA	False	NA	NA	NA	40807457	40774364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40774437_40775030_40775109_40775552_40775597_40776195_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
WTC11_00028741	chr15	-	428	6	FSM	ENSG00000104129.10	ENST00000627802.1	428	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	92.0782276110916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGGTGGAAGCTCCCA	-40802716	True	NA	NA	False	NA	NA	NA	40807478	40776386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
WTC11_00028742	chr15	-	593	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	36	0	-36	multi-exon	FALSE	canonical	3	22	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTAAGGGAAATCATG	-40842292	True	NA	NA	False	TATAAA	-2	NA	40844332	40835843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40836283_40844178
WTC11_00028743	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	-40842347	True	NA	0	True	AATAAA	-24	NA	40844387	40835992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40836283_40838542_40838687_40844178
WTC11_00028744	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	164	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	-40842260	True	NA	61	True	AATAAA	-19	NA	40844300	40838338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40838687_40844178
WTC11_00028745	chr15	-	1690	3	FSM	ENSG00000104140.7	ENST00000220507.5	1650	3	-43	3	-43	-3	multi-exon	FALSE	canonical	3	34	junction_2	2	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGCGTGCGTTGTCTCTG	-40873836	True	NA	-7	True	AATAAA	-14	NA	40874277	40872216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40873502_40873683_40873743_40873931
WTC11_00028746	chr15	-	6312	37	FSM	ENSG00000128908.18	ENST00000401393.7	5991	37	-308	-13	-181	0	multi-exon	FALSE	non_canonical	2	11	junction_1	15.7553390911317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTCTGTGGTCTTT	-41116352	True	NA	0	True	AATAAA	-26	NA	41116461	40978879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40979258_40979491_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
WTC11_00028747	chr15	-	6365	36	FSM	ENSG00000128908.18	ENST00000648947.1	6365	36	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_32	10.8105768314448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTCTGTGGTCTTT	-41116213	False	NA	0	True	AATAAA	-26	NA	41116280	40978879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
WTC11_00028748	chr15	-	6041	35	FSM	ENSG00000128908.18	ENST00000558357.6	6041	35	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	17.1695191412938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGATAAAAAAATCTTAAAT	-41116065	False	1569	-48	True	TATAAA	-27	NA	41116132	40978927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
WTC11_00028749	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	30.1081384346492	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-41328195	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
WTC11_00028750	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	4	-4	0	4	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGTATGTATTCTCTC	-41401347	True	NA	2	True	AATAAA	-27	NA	41402492	41387348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
WTC11_00028751	chr15	-	1233	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	0	131	0	4	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGTATGTATTCTCTC	NA	False	NA	2	True	AATAAA	-27	NA	41402519	41387348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
WTC11_00028752	chr15	-	1266	6	NIC	ENSG00000137806.10	novel	1482	6	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	65.9193446569366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGCATCCAACCAAT	-41401332	True	NA	-17	True	AATAAA	-8	NA	41402477	41387367	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_41387594_41388447_41388523_41394264_41394359_41394858_41395045_41396486_41397141_41402446
WTC11_00028753	chr15	-	1482	6	FSM	ENSG00000137806.10	ENST00000678745.1	1482	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	65.9193446569366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAACCCAAGGCTTTTT	-41401347	True	NA	-57	True	NA	NA	NA	41402492	41387469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41387594_41388447_41388523_41394264_41394359_41394858_41395045_41396486_41397141_41402143
WTC11_00028755	chr15	-	1712	4	FSM	ENSG00000103932.12	ENST00000565167.1	1712	4	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_3	8.17856276425687	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41521780	False	36	-4	True	AATAAA	-21	NA	41521791	41517175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41517692_41517797_41518183_41520390_41521148_41521737
WTC11_00028756	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_24	34.9132854369221	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41536888	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
WTC11_00028757	chr15	-	639	3	FSM	ENSG00000103932.12	ENST00000564934.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAGAATCACTTGAAC	-41523833	False	26	NA	False	NA	NA	NA	41523844	41522505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41522961_41523244_41523355_41523770
WTC11_00028760	chr15	-	6401	6	FSM	ENSG00000103966.11	ENST00000220325.9	6401	6	0	0	0	0	multi-exon	TRUE	canonical	3	413	junction_1	26.5887194125629	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACTTGAGATTTTAGT	-41964209	True	NA	NA	False	AATAAA	-30	NA	41972557	41895932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41901182_41909698_41909864_41919209_41919623_41943066_41943165_41953763_41953941_41972258
WTC11_00028761	chr15	-	511	1	FSM	ENSG00000278493.1	ENST00000622261.1	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTAGCTGTATTTAT	NA	False	NA	-1	True	AATATA	-16	NA	41908714	41908203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41908200_41908700
WTC11_00028762	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_15	22.7516788147356	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-42202881	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
WTC11_00028763	chr15	-	624	1	FSM	ENSG00000166887.16	ENST00000614932.1	2835	1	-43	2254	-43	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTCTTTGAGGTTTGG	-42161568	False	NA	NA	False	NA	NA	NA	42161590	42160966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42161000_42161600
WTC11_00028768	chr15	-	600	3	FSM	ENSG00000166887.16	ENST00000568357.1	593	3	0	-7	0	7	multi-exon	FALSE	canonical	3	260	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTTTTATTACTGTTAT	-42202884	True	NA	NA	False	NA	NA	NA	42208307	42191253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42191561_42199895_42199962_42208080
WTC11_00028769	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	61.9418009392777	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-42269549	True	NA	NA	False	NA	NA	NA	42273433	42210446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
WTC11_00028770	chr15	-	3054	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_8	84.9517837102645	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	42273584	42210446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
WTC11_00028772	chr15	-	2855	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	25	-81	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	80.5261093908604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTATTTTTCTCATT	-42269523	True	NA	NA	False	TATAAA	-14	NA	42273407	42210532	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
WTC11_00028774	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	99.7307486296088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-42269552	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
WTC11_00028776	chr15	-	10460	19	FSM	ENSG00000103994.18	ENST00000263805.8	10460	19	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_18	27.3622250196268	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-42456600	True	NA	-6	True	AATAAA	-18	NA	42457532	42412822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957
WTC11_00028777	chr15	-	10396	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_18	28.2682325326778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-42482847	True	NA	-6	True	AATAAA	-18	NA	42491141	42412822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
WTC11_00028781	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	7	-7	7	-2	multi-exon	FALSE	canonical	2	55	junction_5	14.4968962195361	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATTTGTCTTTCTGTGC	-42547762	True	NA	-4	True	AATAAA	-29	NA	42548786	42537821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
WTC11_00028782	chr15	-	7325	5	FSM	ENSG00000180979.10	ENST00000323443.6	7351	5	0	26	0	-17	multi-exon	FALSE	canonical	3	88	junction_1	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTCACATGAGTAAGAA	-42547778	True	NA	-28	True	AATAAA	-5	NA	42548802	42537845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350
WTC11_00028783	chr15	-	429	2	FSM	ENSG00000180979.10	ENST00000562868.1	531	2	102	0	102	0	multi-exon	FALSE	canonical	3	88	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGATTATATTTCACT	-42544323	False	NA	NA	False	NA	NA	NA	42545347	42543966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076
WTC11_00028784	chr15	-	5488	28	NIC	ENSG00000140326.13	novel	4657	28	NA	NA	0	828	combination_of_known_splicesites	FALSE	canonical	3	31	junction_27	9.95187321669956	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTTTCAAAGGCCTT	-42735958	True	NA	NA	False	NA	NA	NA	42737128	42722715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736082_42736301_42736781_42737012
WTC11_00028786	chr15	-	4657	28	FSM	ENSG00000140326.13	ENST00000356231.4	4657	28	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_26	11.0531823248408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTCACCTGTCTTCTC	-42735958	True	NA	NA	False	AATAAA	-33	NA	42737128	42723543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736079_42736301_42736781_42737012
WTC11_00028788	chr15	-	5354	1	ISM	ENSG00000128881.18	ENST00000267890.11	11208	15	176451	244	163948	-244	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGTTTGTGTGAT	NA	False	NA	-3	True	AATAAA	-22	NA	42744327	42738973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_42739000_42744300
WTC11_00028789	chr15	-	1961	12	FSM	ENSG00000128881.18	ENST00000567840.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	4.9074071186421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCATTTTTGTAACAC	-42919086	True	NA	NA	False	CATAAA	-18	NA	42920809	42776917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
WTC11_00028790	chr15	-	312	1	FSM	ENSG00000254793.1	ENST00000534629.1	1049	1	259	478	259	-478	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTCAAGTACAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	42940099	42939787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42939800_42940100
WTC11_00028791	chr15	-	7698	47	FSM	ENSG00000159459.12	ENST00000290650.9	7698	47	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_12	7.68077658329516	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTTCTCATGTTTGG	-43104612	True	NA	NA	False	AATAAA	-28	NA	43106038	42942896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42945471_42950261_42950364_42952277_42952449_42958012_42958091_42960644_42960702_42963934_42964044_42966152_42966287_42970519_42970608_42976716_42976868_42977879_42977948_42983896_42983994_42984886_42984943_42988818_42988968_42990029_42990121_42998167_42998266_43002554_43002705_43003836_43003931_43007078_43007285_43015687_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
WTC11_00028792	chr15	-	3291	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	9	32	3	-32	multi-exon	FALSE	canonical	3	24	junction_22	5.83925840972209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAATAAAGCAAACCAAA	-43104678	True	NA	NA	False	AATACA	-45	NA	43106104	43015687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
WTC11_00028794	chr15	-	708	1	FSM	ENSG00000205871.5	ENST00000487100.1	792	1	146	-62	146	62	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGACAAAAACTA	NA	False	NA	NA	False	AATAAA	-31	NA	43116347	43115639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43115600_43116300
WTC11_00028795	chr15	-	6906	1	FSM	ENSG00000168806.8	ENST00000305641.7	6925	1	-40	59	-31	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGACTTTCTGGTGTCA	-43330039	True	NA	NA	False	AATACA	-27	NA	43330613	43323707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43323700_43330600
WTC11_00028797	chr15	-	6649	3	ISM	ENSG00000140265.14	ENST00000396976.6	5595	5	1529	-1	1157	1	3prime_fragment	FALSE	canonical	3	58	junction_1	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTTTCTTGAAGTGTT	-43368256	False	NA	NA	False	AATAAA	-20	NA	43368519	43358170	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43361942_43363914_43364383_43366109
WTC11_00028798	chr15	-	6684	5	FSM	ENSG00000140265.14	ENST00000396976.6	5595	5	-1089	0	-94	0	multi-exon	FALSE	canonical	3	38	junction_4	20.2900837849428	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	-43370874	False	NA	NA	False	AATAAA	-19	NA	43371137	43358171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595
WTC11_00028799	chr15	-	6128	6	FSM	ENSG00000140265.14	ENST00000684362.1	6055	6	-71	-2	-71	-1	multi-exon	FALSE	canonical	3	13	junction_5	25.350345165303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTTCTTGAAGTG	-43370851	False	NA	NA	False	AATAAA	-18	NA	43371114	43358172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595_43370026_43370557
WTC11_00028801	chr15	-	3706	7	FSM	ENSG00000067369.14	ENST00000476454.5	2222	7	-989	-495	-989	490	multi-exon	FALSE	canonical	3	190	junction_5	39.0796906618031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTATTATTATTAT	-43418192	False	NA	NA	False	NA	NA	NA	43418205	43406718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224
WTC11_00028802	chr15	-	10369	28	FSM	ENSG00000067369.14	ENST00000382044.9	10369	28	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_19	43.9530551411552	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTTATTCTGCTT	-43485905	True	NA	-11	True	AATAAA	-17	NA	43493156	43403060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224_43416417_43420304_43420736_43421024_43421175_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
WTC11_00028804	chr15	-	6020	27	FSM	ENSG00000067369.14	ENST00000382039.7	6015	27	0	-5	0	0	multi-exon	FALSE	canonical	2	4	junction_8	57.3318998949287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCATCTGTTTTTTT	-43485854	True	NA	-1	True	AATAAA	-31	NA	43493105	43407208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224_43416417_43420304_43420736_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
WTC11_00028805	chr15	-	6343	28	FSM	ENSG00000067369.14	ENST00000263801.7	6346	28	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_27	57.1557206763738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCATCTGTTTTTTT	-43510419	True	NA	-1	True	AATAAA	-31	NA	43510611	43407208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224_43416417_43420304_43420736_43421024_43421175_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43510369
WTC11_00028812	chr15	-	5587	30	FSM	ENSG00000168781.23	ENST00000381885.5	5596	30	0	9	0	4	multi-exon	FALSE	canonical	3	30	junction_29	11.8951023604872	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGGATGATGGTGATG	-43583562	False	NA	-10	True	AATAAA	-21	NA	43584864	43533470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43535477_43539469_43539584_43558794_43558933_43564102_43564166_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573149_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069_43578157_43579018_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798
WTC11_00028813	chr15	-	607	2	FSM	ENSG00000168781.23	ENST00000469229.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCACTGGCTGATGTGG	NA	False	NA	NA	False	NA	NA	NA	43574635	43573839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43574033_43574221
WTC11_00028814	chr15	-	508	2	FSM	ENSG00000168781.23	ENST00000465123.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAGATTCATTTGGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	43576948	43576167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43576554_43576826
WTC11_00028815	chr15	-	572	5	FSM	ENSG00000168781.23	ENST00000427877.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	25.2487623459052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCACGGAGGCTGAG	-43580890	False	NA	NA	False	NA	NA	NA	43582192	43579073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43579121_43581001_43581124_43581226_43581430_43581852_43581955_43582094
WTC11_00028816	chr15	-	279	2	FSM	ENSG00000168781.23	ENST00000476294.1	390	2	0	111	0	-111	multi-exon	FALSE	canonical	3	65	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGGAAGCAGGTGGAA	-43580915	False	NA	NA	False	NA	NA	NA	43582217	43581798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43581955_43582094
WTC11_00028819	chr15	-	268	3	FSM	ENSG00000168781.23	ENST00000431962.1	268	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATCCTAGAGCGACTCT	-43588894	True	NA	NA	False	AAGAAA	-21	NA	43590196	43583531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43583600_43584357_43584533_43590171
WTC11_00028820	chr15	-	1097	9	NNC	ENSG00000249839.1	novel	3235	26	NA	NA	-5700	-17408	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	17.244111313721	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGGAGGGCCCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	43690039	43681061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_43681224_43681687_43681790_43681929_43682085_43682398_43682485_43682696_43682788_43683238_43683435_43684192_43684368_43684633_43684728_43690003
WTC11_00028821	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	3	10	junction_1	4.78423336480244	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-43746109	True	NA	NA	False	NA	NA	NA	43746285	43736797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
WTC11_00028822	chr15	-	1770	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	-15	0	0	multi-exon	FALSE	canonical	3	50	junction_6	4.67011777153425	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTGTACAAGTTTATAT	-43776626	True	NA	-16	True	ATTAAA	-17	NA	43776966	43772604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
WTC11_00028826	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	15.3622914957372	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	-43820248	True	NA	-1	True	ATTAAA	-25	NA	43824690	43804491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
WTC11_00028827	chr15	-	5245	14	FSM	ENSG00000171877.21	ENST00000417257.6	5051	14	0	-194	0	191	multi-exon	FALSE	canonical	3	25	junction_6	7.07525063850272	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCGGCCAGGCACAG	-44194374	True	NA	NA	False	GATAAA	-14	NA	44195271	43870569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204_43924310_44194952
WTC11_00028828	chr15	-	4091	15	FSM	ENSG00000171877.21	ENST00000402883.5	4091	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.9923444968285	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGAGTGGGCTCTT	-44194313	True	NA	-6	True	AATAAA	-11	NA	44195210	43870766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43873223_43874118_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204_43924310_44194952
WTC11_00028830	chr15	-	315	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	-10	91	-10	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTGTGATGGATAAGC	-43876239	False	NA	NA	False	NA	NA	NA	43876254	43875939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43875900_43876300
WTC11_00028831	chr15	-	2833	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	24	16	4	-16	multi-exon	FALSE	canonical	3	66	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGACACTCTATCAAAA	-44536887	False	NA	NA	False	NA	NA	NA	44536909	44533508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44536042
WTC11_00028832	chr15	-	3111	2	FSM	ENSG00000179523.6	ENST00000657789.1	2114	2	19	-1016	0	-6	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTATCAAAAAAAAAAAAAA	-44536310	True	NA	NA	False	NA	NA	NA	44536894	44533498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44535759
WTC11_00028833	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	-44536900	False	NA	-5	True	AATAAA	-19	NA	44536922	44534504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44536042_44536359_44536800
WTC11_00028834	chr15	-	1246	3	NNC	ENSG00000179523.6	novel	1408	3	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	20.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATCCTATTGATTCTG	-44536303	True	NA	-9	True	AATAAA	-15	NA	44536887	44534508	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_44535475_44536165_44536359_44536800
WTC11_00028835	chr15	-	7770	40	FSM	ENSG00000104133.16	ENST00000261866.12	7772	40	2	0	-2	0	multi-exon	FALSE	canonical	2	43	junction_37	16.3721914294482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661256	True	NA	-1	True	AATAAA	-17	NA	44663660	44562695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00028836	chr15	-	1023	7	FSM	ENSG00000104133.16	ENST00000558138.2	1023	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	35.1540261642327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTCATAGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	44572824	44563120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44570524_44570659_44572682
WTC11_00028837	chr15	-	518	3	FSM	ENSG00000104133.16	ENST00000559933.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCCAGTGAGGAGTATG	NA	False	NA	NA	False	NA	NA	NA	44573820	44570552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44570659_44572682_44572821_44573546
WTC11_00028838	chr15	-	2632	9	FSM	ENSG00000104133.16	ENST00000561391.2	2861	9	229	0	229	0	multi-exon	FALSE	canonical	3	59	junction_3	7.17199414389053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCAGGAGGCTGAGGC	NA	False	NA	NA	False	AATACA	-41	NA	44596943	44573118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783
WTC11_00028839	chr15	-	761	2	FSM	ENSG00000104133.16	ENST00000558080.1	759	2	0	-2	0	1	multi-exon	FALSE	canonical	3	78	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTTTTTATTGTT	NA	False	NA	NA	False	AATACA	-37	NA	44575272	44573355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44573746_44574901
WTC11_00028840	chr15	-	6426	32	FSM	ENSG00000104133.16	ENST00000558319.5	6426	32	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_29	8.57591429127656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCTTTTTATTGT	-44661274	True	NA	NA	False	AATACA	-36	NA	44663678	44573356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00028841	chr15	-	1116	4	FSM	ENSG00000104133.16	ENST00000683838.1	1955	4	145	694	145	275	multi-exon	FALSE	canonical	1	2	junction_3	26.2424592343528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGAGGGTGAAGATAG	-44604540	False	NA	NA	False	AGTAAA	-34	NA	44604553	44598078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44598374_44598630_44598837_44600466_44600633_44604104
WTC11_00028842	chr15	-	3144	17	FSM	ENSG00000104133.16	ENST00000683573.1	3146	17	2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	15.0161371530764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAGAGTTACATGA	-44661256	True	NA	NA	False	NA	NA	NA	44663660	44613508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44613537_44615362_44615567_44620124_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00028843	chr15	-	1619	1	Genic_Genomic	ENSG00000259479.6	novel	NA	NA	NA	NA	1842	476	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCATCCTCACGCCCTGT	NA	False	NA	NA	False	NA	NA	NA	44826889	44825270	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_-_44825300_44826900
WTC11_00028846	chr15	-	2073	6	FSM	ENSG00000138606.20	ENST00000560540.5	2062	6	0	-11	0	11	multi-exon	FALSE	canonical	3	39	junction_2	42.5318704032635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTCCTTTCTTTGACG	-45186342	True	NA	1	True	NA	NA	NA	45187956	45167202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45168134_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
WTC11_00028847	chr15	-	1996	6	NIC	ENSG00000138606.20	novel	2215	7	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	39.8577470512321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	-45186274	False	NA	-10	True	TATAAA	-39	NA	45187888	45167213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_45168134_45171882_45172003_45172146_45172319_45175218_45175426_45178164_45178307_45187453
WTC11_00028848	chr15	-	1731	4	FSM	ENSG00000138606.20	ENST00000560734.5	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	60.1405760605009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCTGGAGCAGACACAG	-45186338	True	NA	-47	True	TATAAA	-2	NA	45187952	45167250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45168134_45175218_45175426_45178164_45178307_45187453
WTC11_00028850	chr15	-	1261	6	NIC	ENSG00000138606.20	novel	2499	6	NA	NA	7	-145	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	55.4890980283515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCAGCCTGTATACCAT	-45186331	True	NA	NA	False	TATAAA	-15	NA	45187945	45170352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_45170483_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
WTC11_00028851	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.39531046372681	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	-45377839	True	NA	-4	True	AATAAA	-21	NA	45378544	45361123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
WTC11_00028852	chr15	-	628	1	FSM	ENSG00000284540.1	ENST00000640911.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATAGGGCGGCTGGCCG	NA	False	NA	NA	False	NA	NA	NA	47134122	47133494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_47133500_47134100
WTC11_00028853	chr15	-	459	1	FSM	ENSG00000213862.4	ENST00000497325.1	792	1	381	-48	381	48	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTCCTTCAAAACTA	NA	False	NA	NA	False	ATTAAA	-7	NA	47730554	47730095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_47730100_47730600
WTC11_00028854	chr15	-	10138	17	FSM	ENSG00000104177.19	ENST00000324324.12	10137	17	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_13	51.2797169941489	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGCCCTGTTGTCCA	-48169183	True	NA	-3	True	AATAAA	-16	NA	48178295	48134630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
WTC11_00028857	chr15	-	2959	16	FSM	ENSG00000104177.19	ENST00000267836.10	2958	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9836033336939	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTATTTGTTGCTTTT	-48169241	True	NA	NA	False	ATTAAA	-20	NA	48178353	48141795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
WTC11_00028858	chr15	-	1746	3	FSM	ENSG00000166147.15	ENST00000682158.1	2885	3	1139	0	888	0	multi-exon	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACAATCTCTTCTTTTT	NA	False	NA	-29	True	CATAAA	-9	NA	48415828	48410101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48411380_48412568_48412744_48415535
WTC11_00028860	chr15	-	529	1	FSM	ENSG00000273925.1	ENST00000616350.1	526	1	-7	4	-7	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGTGGTTATCTCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	48663063	48662534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48662500_48663100
WTC11_00028861	chr15	-	445	2	FSM	ENSG00000259469.1	ENST00000559165.1	540	2	92	3	92	-3	multi-exon	FALSE	canonical	2	6	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGATTGTTAATGTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	48729752	48729082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48729187_48729411
WTC11_00028862	chr15	-	5564	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	-4	0	4	multi-exon	FALSE	canonical	3	41	junction_1	13.4997808441558	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGAATTATTTTGTGG	-48808719	True	NA	3	True	AATAAA	-22	NA	48811069	48737933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
WTC11_00028863	chr15	-	5097	26	FSM	ENSG00000103995.14	ENST00000399334.7	5097	26	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	16.6230683088292	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAATAACATCTGTTA	-48808637	True	NA	NA	False	NA	NA	NA	48810987	48738150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
WTC11_00028864	chr15	-	5194	26	ISM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	2678	0	-110	5prime_fragment	FALSE	canonical	3	55	junction_19	12.3750717169639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAGTAACCAACAAAAA	-48808719	True	NA	NA	False	NA	NA	NA	48811069	48740615	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
WTC11_00028865	chr15	-	1880	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	67	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	6.16891850777392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	-48808729	True	NA	NA	False	AAGAAA	-24	NA	48811079	48772514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
WTC11_00028866	chr15	-	4842	4	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	45392	0	887	0	3prime_fragment	FALSE	canonical	2	6	junction_1	3.74165738677394	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	NA	False	NA	NA	False	AATAAA	-19	NA	49001054	48988637	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876
WTC11_00028867	chr15	-	310	2	FSM	ENSG00000138593.9	ENST00000561203.1	472	2	38	124	38	-124	multi-exon	FALSE	canonical	3	7	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATATCATTAGTCTGAGC	NA	False	NA	NA	False	AATGAA	-42	NA	49017015	49016559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49016702_49016847
WTC11_00028868	chr15	-	315	3	FSM	ENSG00000138593.9	ENST00000557940.1	410	3	95	0	95	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTAGCAGCAGCCCTTGC	-49019541	False	NA	NA	False	AAAAAG	-14	NA	49019552	49016916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49017016_49017547_49017629_49019417
WTC11_00028869	chr15	-	6547	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	29	0	-29	multi-exon	FALSE	canonical	0	0	junction_6	117.353780178664	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTATTGGTAATAAAAAATA	-49149722	True	NA	NA	False	NA	NA	NA	49155599	49122755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
WTC11_00028870	chr15	-	2032	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_6	123.946533051778	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	-49149780	True	NA	-6	True	AATAAA	-17	NA	49155657	49127349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
WTC11_00028871	chr15	-	205	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTTGTATCTATAAG	NA	False	NA	NA	False	NA	NA	NA	49220267	49220062	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_49220100_49220300
WTC11_00028872	chr15	-	894	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	70	-194	intron_retention	FALSE	canonical	0	0	junction_3	14.4360659460949	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAGAAGAATACTAAG	-49396188	True	NA	NA	False	NA	NA	NA	49396372	49328586	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49395974
WTC11_00028874	chr15	-	443	1	FSM	ENSG00000259531.2	ENST00000560489.2	1562	1	1305	-186	1305	186	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCCTTCACATTAAATAA	NA	False	NA	NA	False	ATTAAA	-25	NA	49365380	49364937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49364900_49365400
WTC11_00028875	chr15	-	912	7	FSM	ENSG00000166262.16	ENST00000561319.5	918	7	0	6	0	-6	multi-exon	FALSE	canonical	1	2	junction_1	4.52462398683274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTCTAAGTCAGATTTT	-49615152	False	NA	NA	False	AATATA	-19	NA	49615171	49574743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49575110_49576740_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120
WTC11_00028876	chr15	-	954	4	FSM	ENSG00000166262.16	ENST00000558579.5	982	4	0	28	0	-28	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTCATTAAAAAGTATT	NA	False	NA	-48	True	NA	NA	NA	49589943	49576163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775
WTC11_00028878	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	49.7242395618073	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-50351679	True	NA	-11	True	AATAAA	-17	NA	50355198	50275388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
WTC11_00028879	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	51.6690187636653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351634	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
WTC11_00028880	chr15	-	1450	8	FSM	ENSG00000104064.18	ENST00000543881.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	86.2054972440971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATGAGTTGATAAAGAT	-50351605	True	NA	NA	False	TTTAAA	-38	NA	50355124	50278401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50354984
WTC11_00028881	chr15	-	1628	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	-216	0	202	multi-exon	FALSE	canonical	3	33	junction_8	89.0118496325068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTTAAAGGAGGTTGAT	-50355162	False	NA	NA	False	NA	NA	NA	50355202	50285677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
WTC11_00028882	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	44.7172522977567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351634	True	NA	NA	False	AATAAA	-20	NA	50355153	50285879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
WTC11_00028883	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	41.7284711692443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351679	True	NA	NA	False	AATAAA	-20	NA	50355198	50285879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
WTC11_00028884	chr15	-	1635	9	FSM	ENSG00000104064.18	ENST00000359031.8	1633	9	0	-2	0	0	multi-exon	FALSE	canonical	3	33	junction_8	84.3414748211104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50355368	True	NA	NA	False	AATAAA	-20	NA	50355408	50285879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
WTC11_00028887	chr15	-	1284	1	FSM	ENSG00000285410.1	ENST00000615671.2	5926	1	4460	182	4460	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCACAAGATGAGTTATT	-50350361	False	NA	NA	False	GATAAA	-36	NA	50350401	50349117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50349100_50350400
WTC11_00028888	chr15	-	1189	1	FSM	ENSG00000285410.1	ENST00000615671.2	5926	1	-26	4763	-26	-4763	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTTTTCTCACTGA	-50354847	False	NA	62	True	NA	NA	NA	50354887	50353698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50353700_50354900
WTC11_00028889	chr15	-	10381	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	1	0	1	0	multi-exon	TRUE	canonical	3	47	junction_11	14.2043115065096	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-50681717	True	NA	NA	False	AATAAA	-21	NA	50686796	50557157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
WTC11_00028890	chr15	-	7218	39	FSM	ENSG00000092439.16	ENST00000560955.5	7218	39	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	15.0565186368763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGAGTTTAATCAT	-50681692	True	NA	-5	True	AATAAA	-16	NA	50686771	50560292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583157_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
WTC11_00028891	chr15	-	609	6	FSM	ENSG00000092439.16	ENST00000560849.2	624	6	15	0	15	0	multi-exon	FALSE	canonical	3	33	junction_5	20.9914268214431	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGGAGATGGGAGGA	-50586557	False	NA	NA	False	AATAGA	-9	NA	50586567	50575027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50575136_50575723_50575920_50578638_50578665_50580873_50580909_50583088_50583157_50586391
WTC11_00028892	chr15	-	2518	10	FSM	ENSG00000092439.16	ENST00000560638.1	2518	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	10.6666666666667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTCCATCTCTCAAGA	-50624206	False	NA	NA	False	NA	NA	NA	50624216	50603946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165
WTC11_00028893	chr15	-	7272	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	-2	0	2	multi-exon	FALSE	canonical	3	58	junction_4	18.3871350322414	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGTTTTATTTTGAA	-50761550	True	NA	-12	True	AATAAA	-21	NA	50765706	50702263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
WTC11_00028894	chr15	-	1422	12	FSM	ENSG00000138600.10	ENST00000558934.1	1422	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	36.247769951354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTTTACTGTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	50747531	50707447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494
WTC11_00028895	chr15	-	626	4	FSM	ENSG00000138600.10	ENST00000560288.1	742	4	0	116	0	-116	multi-exon	FALSE	canonical	3	95	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTAGCAATTACATAT	-50761553	True	NA	NA	False	NA	NA	NA	50765709	50748112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50748203_50748687_50748871_50749635_50749747_50765467
WTC11_00028896	chr15	-	1865	2	FSM	ENSG00000183578.8	ENST00000637513.2	2206	2	272	69	-133	7	multi-exon	FALSE	canonical	1	2	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGGCTTTTCAGTCAT	-51094623	False	NA	NA	False	AATGAA	-13	NA	51094634	51056669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51058444_51094543
WTC11_00028897	chr15	-	1891	2	FSM	ENSG00000104093.14	ENST00000559769.1	1948	2	60	-3	60	0	multi-exon	FALSE	canonical	3	33	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTGATACTGTTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	51450613	51447787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51449194_51450128
WTC11_00028898	chr15	-	308	4	FSM	ENSG00000104093.14	ENST00000559868.1	610	4	0	302	0	-302	multi-exon	FALSE	canonical	3	16	junction_1	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGTTGACAGAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	51456318	51453549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51453642_51455150_51455229_51456065_51456194_51456308
WTC11_00028899	chr15	-	318	3	FSM	ENSG00000104093.14	ENST00000559062.5	569	3	251	0	251	0	multi-exon	FALSE	canonical	3	22	junction_1	2.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTAAGTATTTATGACC	NA	False	NA	NA	False	NA	NA	NA	51458627	51456312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51456370_51457327_51457467_51458505
WTC11_00028902	chr15	-	1602	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	-383	58	83	0	multi-exon	FALSE	canonical	3	29	junction_1	3.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	-51738015	False	NA	-11	True	AATAAA	-41	NA	51738038	51723068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51723650_51724789_51725122_51737349
WTC11_00028903	chr15	-	775	3	FSM	ENSG00000140280.14	ENST00000558126.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGCTGTTTAAGTGA	-51751363	True	NA	NA	False	NA	NA	NA	51751437	51723243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51723650_51724789_51724992_51751270
WTC11_00028904	chr15	-	2197	13	NNC	ENSG00000166477.13	novel	2165	12	NA	NA	0	56478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.824932928663	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAGATTGTATCTCC	-51964690	True	NA	NA	False	AAAAAG	-4	NA	51971778	51881546	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_51881579_51938024_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
WTC11_00028905	chr15	-	2146	12	NNC	ENSG00000166477.13	novel	2165	12	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	146.353133445859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964646	True	NA	-2	True	AATAAA	-16	NA	51971734	51938024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_51938286_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
WTC11_00028906	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	43.9830921684028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964690	True	NA	-2	True	AATAAA	-16	NA	51971778	51938024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
WTC11_00028907	chr15	-	1190	2	FSM	ENSG00000137875.4	ENST00000260442.3	1249	2	59	0	52	0	multi-exon	FALSE	canonical	2	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTCTTTCCTAATT	-52112698	False	NA	NA	False	AATAAA	-20	NA	52112716	52109262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52109974_52112237
WTC11_00028908	chr15	-	1907	4	FSM	ENSG00000069966.19	ENST00000557936.5	2007	4	100	0	100	0	multi-exon	FALSE	canonical	3	219	junction_3	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTATA	-52128679	False	NA	NA	False	NA	NA	NA	52128695	52121625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195
WTC11_00028909	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_6	17.9454729667401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	NA	False	NA	-6	True	NA	NA	NA	52180001	52122205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
WTC11_00028910	chr15	-	6977	41	FSM	ENSG00000128833.13	ENST00000261839.12	6977	41	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_22	11.6816094781498	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGTCAGATTCTTT	-52293154	True	NA	NA	False	AATAAA	-14	NA	52295804	52192321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52194055_52195376_52195458_52196308_52196484_52204864_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187_52213287_52214602_52214691_52218518_52218688_52219758_52219823_52221161_52221256_52223543_52223725_52224900_52224982_52225074_52225139_52225438_52225533_52229132_52229314_52232621_52232686_52235669_52235764_52237481_52237647_52239732_52239880_52242047_52242214_52244355_52244568_52245353_52245466_52245955_52246043_52246916_52247015_52247457_52247593_52248699_52248784_52251389_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
WTC11_00028912	chr15	-	2970	13	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	18	57910	-13	759	5prime_fragment	FALSE	canonical	3	39	junction_3	12.7442797625706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATAAGTTTTTAGT	-52293136	True	NA	NA	False	AAAAAG	-17	NA	52295786	52250231	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
WTC11_00028913	chr15	-	12228	41	FSM	ENSG00000197535.16	ENST00000399231.8	12227	41	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_12	23.2018183554652	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAGTGTCTTATAA	-52529021	False	NA	NA	False	AATAAA	-18	NA	52529050	52307279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52343116_52343198_52346360_52346462_52348817_52348827_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
WTC11_00028914	chr15	-	12321	40	FSM	ENSG00000197535.16	ENST00000687574.1	12223	40	-92	-6	-92	1	multi-exon	FALSE	canonical	0	0	junction_11	22.3114939289422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAGTGTCTTATAA	-52529195	False	NA	NA	False	AATAAA	-18	NA	52529224	52307279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52348817_52348827_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
WTC11_00028916	chr15	-	12226	39	NIC	ENSG00000197535.16	novel	12223	40	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	2	39	junction_11	16.8218010834081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAGTGTCTTATAA	-52528221	True	NA	NA	False	AATAAA	-18	NA	52529138	52307279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
WTC11_00028917	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_1	60.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-52546099	True	NA	-8	True	ATTAAA	-17	NA	52569030	52547044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847
WTC11_00028918	chr15	-	5302	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	-4557	0	8	multi-exon	FALSE	canonical	3	92	junction_3	714.238211118827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTATTTGTGAAACATT	-52569144	False	NA	0	True	ATTAAA	-25	NA	52569167	52547036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
WTC11_00028919	chr15	-	5328	4	FSM	ENSG00000128989.11	ENST00000566423.5	5362	4	42	-8	12	8	multi-exon	FALSE	canonical	3	278	junction_3	626.796263195271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTATTTGTGAAACATT	NA	False	NA	0	True	ATTAAA	-25	NA	52569197	52547036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569115
WTC11_00028921	chr15	-	1489	2	FSM	ENSG00000128989.11	ENST00000568196.1	1489	2	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCATGTGCATTAACTG	NA	False	NA	-79	True	AATGAA	-1	NA	52557744	52551260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099
WTC11_00028922	chr15	-	944	3	FSM	ENSG00000128989.11	ENST00000563277.5	955	3	11	0	11	0	multi-exon	FALSE	canonical	3	21	junction_2	761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGTGTAACTTATGT	NA	False	NA	NA	False	NA	NA	NA	52569198	52551366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52569115
WTC11_00028925	chr15	-	4714	13	FSM	ENSG00000047346.13	ENST00000619572.5	4726	13	12	0	-4	0	multi-exon	FALSE	canonical	2	9	junction_12	6.84754619472471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-52678974	True	NA	NA	False	AATATA	-16	NA	52679376	52581320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678827
WTC11_00028926	chr15	-	2594	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	18	-1275	18	1275	multi-exon	FALSE	canonical	3	56	junction_1	29	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGTGGGGGATGGGAA	-52804959	False	NA	NA	False	NA	NA	NA	52804971	52798890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52800918_52804208_52804298_52804493
WTC11_00028927	chr15	-	4571	2	NIC	ENSG00000259203.3	novel	2211	3	NA	NA	15	5	intron_retention	FALSE	canonical	3	114	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGAATCCAGTGATTT	-52801848	True	NA	-5	True	AATAAA	-23	NA	52804927	52800160	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52804298_52804493
WTC11_00028928	chr15	-	1955	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	175	81	-87	-77	multi-exon	TRUE	canonical	2	7	junction_1	53.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTCATCAGTCAGAG	-52805064	False	NA	-78	True	NA	NA	NA	52805076	52802564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52803848_52804208_52804298_52804493
WTC11_00028929	chr15	-	4222	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	2	0	-2	multi-exon	FALSE	canonical	3	73	junction_2	26.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTACTGTTTTTTGTTTG	-53540309	True	NA	NA	False	ATTAAA	-13	NA	53541080	53513743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_53517755_53523217_53523323_53540974
WTC11_00028930	chr15	-	4330	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	3	0	-2	multi-exon	FALSE	canonical	3	44	junction_2	41	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTACTGTTTTTTGTTTG	-53540332	True	NA	NA	False	ATTAAA	-13	NA	53541103	53513743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_53517755_53523217_53523323_53540889
WTC11_00028931	chr15	-	1916	7	NNC	ENSG00000137876.11	novel	1889	6	NA	NA	0	10866	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	743.978811675589	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTCTGTGAGAAGAG	-55179683	True	NA	NA	False	AAAAAG	-1	NA	55196941	55169939	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_55169967_55180805_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
WTC11_00028932	chr15	-	5081	1	FSM	ENSG00000279145.2	ENST00000623483.2	5362	1	376	-95	376	95	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGACCAGCCTGACCAACA	-55176341	False	NA	NA	False	NA	NA	NA	55176363	55171282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55171300_55176400
WTC11_00028933	chr15	-	1889	6	FSM	ENSG00000137876.11	ENST00000260443.9	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	1890	junction_5	61.5681735964289	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTTATTAGGAAACAAGT	-55179683	True	NA	NA	False	AATAAA	-15	NA	55196941	55180805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
WTC11_00028934	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	9.38083151964686	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-55289250	True	NA	3	True	AATAAA	-22	NA	55289813	55202965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
WTC11_00028935	chr15	-	648	1	FSM	ENSG00000276533.1	ENST00000611214.1	498	1	-158	8	-158	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCCACTCACTGTTCTT	-55289493	False	NA	-13	True	ATTAAA	-8	NA	55289504	55288856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55288900_55289500
WTC11_00028936	chr15	-	888	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	51	-138	-3	0	multi-exon	FALSE	canonical	3	70	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317689	True	NA	0	True	AATAAA	-27	NA	55319110	55317183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55317868_55318906
WTC11_00028937	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317702	True	NA	0	True	AATAAA	-27	NA	55319123	55317183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55317868_55318863
WTC11_00028938	chr15	-	3557	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	-4	0	4	multi-exon	FALSE	canonical	3	29	junction_1	19.4164878389476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCAGTCAATTTTAGAA	-55406692	True	NA	-16	True	AATAAA	-37	NA	55408359	55355234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
WTC11_00028939	chr15	-	6749	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	88	-15	-51	4	multi-exon	FALSE	canonical	3	75	junction_4	7.90504876128967	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCAGTCAATTTTAGAA	NA	False	NA	-16	True	AATAAA	-37	NA	55408422	55355234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
WTC11_00028940	chr15	-	2970	8	FSM	ENSG00000260916.8	ENST00000569205.5	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	25.0534123302147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGAGGCAAACTAAGC	-55406385	False	20	NA	False	GATAAA	-9	NA	55408052	55359017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
WTC11_00028941	chr15	-	1662	9	FSM	ENSG00000256061.7	ENST00000348518.4	1897	9	235	0	3	0	multi-exon	TRUE	canonical	2	2	junction_4	6.23999198717434	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497878	True	NA	NA	False	AATAAA	-15	NA	55498366	55430307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
WTC11_00028942	chr15	-	1556	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	11	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	7.55388803794416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497878	True	NA	NA	False	AATAAA	-15	NA	55498366	55430307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
WTC11_00028943	chr15	-	1004	3	FSM	ENSG00000166450.13	ENST00000561292.1	833	3	-88	-83	-26	65	multi-exon	FALSE	canonical	3	5	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATGATGGAGGCTCAA	NA	False	NA	NA	False	AATAAA	-1	NA	55743178	55738139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55738500_55740381_55740685_55742837
WTC11_00028944	chr15	-	5739	29	FSM	ENSG00000069869.17	ENST00000435532.8	5735	29	2	-6	2	6	multi-exon	FALSE	canonical	3	11	junction_3	4.72617548276379	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTTCATTATAAAATAG	-55993067	True	NA	NA	False	AATAAA	-34	NA	55993610	55826915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55830000_55830513_55830587_55833007_55833105_55834037_55834146_55834226_55834287_55837788_55837850_55838106_55838181_55838508_55838605_55840446_55840518_55840605_55840728_55841933_55842164_55846968_55847035_55848371_55848431_55848520_55848576_55848805_55848887_55850541_55850743_55852423_55852544_55856130_55856197_55860406_55860575_55860660_55860779_55862912_55863080_55869578_55869682_55872414_55872477_55873957_55874009_55924645_55924700_55951375_55951415_55951510_55951590_55966472_55966547_55993510
WTC11_00028945	chr15	-	8015	10	NNC	ENSG00000181827.16	novel	11022	12	NA	NA	-437	-3252	intron_retention	FALSE	non_canonical	2	3	junction_9	17.051845416223	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATCTGAAGGTGTTTTA	-56244306	False	NA	-9	True	ATTAAA	-21	NA	56244316	56090532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_56096621_56098080_56098377_56101358_56101567_56102168_56102250_56103549_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124_56244086_56244296
WTC11_00028946	chr15	-	2018	10	FSM	ENSG00000138587.6	ENST00000260453.4	2030	10	12	0	12	0	multi-exon	FALSE	canonical	3	36	junction_9	9.98888270918113	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTTTGGTCTACTG	-56464372	True	NA	-2	True	AATAAA	-22	NA	56465125	56428723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56429194_56431372_56431499_56434137_56434396_56443429_56443538_56443637_56443855_56444443_56444674_56446840_56446944_56456393_56456522_56464025_56464248_56464969
WTC11_00028947	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	17.1092262707221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-56731652	True	NA	44	True	AATAAA	-18	NA	56733509	56630175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
WTC11_00028948	chr15	-	3650	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	16	0	-16	multi-exon	FALSE	canonical	3	31	junction_4	12.0332871651931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATAAATAAATATTATAA	-56731637	True	NA	NA	False	ATTAAA	-43	NA	56733494	56697778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
WTC11_00028949	chr15	-	3619	1	FSM	ENSG00000274667.1	ENST00000614966.1	680	1	-2555	-384	-2555	384	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTTGTAATACAGATC	-56731309	False	NA	NA	False	NA	NA	NA	56733166	56729547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56729500_56733200
WTC11_00028950	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	-56917265	True	NA	-17	True	AATAAA	-19	NA	56918493	56916725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56917213_56917539
WTC11_00028951	chr15	-	1072	3	NNC	ENSG00000285331.2	novel	1441	2	NA	NA	-53	-14	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	17.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATCAAGAAAACAAACATG	-56917210	True	NA	-31	True	AATAAA	-5	NA	56918438	56916739	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_56917213_56917539_56917695_56917994
WTC11_00028952	chr15	-	6907	17	NNC	ENSG00000137845.15	novel	11158	16	NA	NA	0	12824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.62135306078	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAAACAGAAACAAAAAG	-58739881	True	NA	NA	False	AAAAAG	-3	NA	58749770	58575984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_58576012_58593149_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
WTC11_00028953	chr15	-	11162	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	-4	0	4	multi-exon	FALSE	canonical	3	586	junction_9	66.4514526218619	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTGGATGAATGTT	-58739818	True	NA	3	True	AATAAA	-18	NA	58749707	58588804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
WTC11_00028954	chr15	-	4632	17	NNC	ENSG00000137845.15	novel	11158	16	NA	NA	0	3722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.62135306078	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTACCTGGCCTTTGT	-58739830	True	NA	NA	False	NA	NA	NA	58749719	58593149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_58593197_58595393_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
WTC11_00028955	chr15	-	4682	17	NNC	ENSG00000137845.15	novel	11158	16	NA	NA	0	3722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.62135306078	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTACCTGGCCTTTGT	-58739881	True	NA	NA	False	NA	NA	NA	58749770	58593149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_58593196_58595393_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
WTC11_00028960	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-58739830	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58749037_58749479
WTC11_00028961	chr15	-	4173	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	-5	0	5	multi-exon	FALSE	canonical	3	233	junction_15	75.2750954831676	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTCAGCGT	-58924688	True	NA	-23	True	AATAAA	-21	NA	58933679	58879044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
WTC11_00028976	chr15	-	505	2	FSM	ENSG00000137776.17	ENST00000474342.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACAGTTCTTTAT	-58924625	True	NA	NA	False	NA	NA	NA	58933616	58932151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58932444_58933403
WTC11_00028977	chr15	-	10395	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	-1751	0	1751	multi-exon	TRUE	canonical	3	130	junction_12	30.6448303004383	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGATAAATCCACGAAGAT	-59370805	True	NA	NA	False	NA	NA	NA	59372871	59130682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
WTC11_00028978	chr15	-	952	8	FSM	ENSG00000157483.9	ENST00000560749.1	952	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	73.0479294709987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGTGGAGGTGCAGA	-59208761	False	NA	NA	False	NA	NA	NA	59208781	59171896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59195460_59195568_59202325_59202408_59205399_59205486_59208680
WTC11_00028979	chr15	-	786	2	FSM	ENSG00000157483.9	ENST00000558646.1	578	2	-4	-204	-4	204	multi-exon	FALSE	canonical	3	237	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACCGTTTCAGAATGA	-59370809	True	NA	NA	False	NA	NA	NA	59372875	59272041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59272450_59372497
WTC11_00028980	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	69.3194597497701	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	-59645129	True	NA	-3	True	AATAAA	-18	NA	59657515	59638061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
WTC11_00028981	chr15	-	1794	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	-24	-800	3	-7	multi-exon	FALSE	canonical	3	18	junction_4	587.497268078755	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAATTCATTCTATGCA	-59645152	True	NA	-10	True	AATAAA	-11	NA	59657538	59638068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
WTC11_00028982	chr15	-	1847	5	FSM	ENSG00000140307.11	ENST00000396061.5	758	5	-42	-1047	0	0	multi-exon	FALSE	canonical	2	62	junction_4	501.716304299551	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	-59645135	True	NA	-3	True	AATAAA	-18	NA	59657521	59638061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657123
WTC11_00028985	chr15	-	6325	10	FSM	ENSG00000140299.13	ENST00000267859.8	6325	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	28.5298197905972	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTTGTCTTTTTATCAC	NA	False	NA	-1	True	AATAAA	-15	NA	59689534	59659145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
WTC11_00028993	chr15	-	756	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	2	-1	2	1	multi-exon	FALSE	canonical	2	3	junction_2	1	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGATCTGTGCTATTTTGT	-60118279	True	NA	NA	False	AATAAA	-20	NA	60118318	60073552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60074049_60074800_60074936_60118193
WTC11_00028994	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_12	114.214314874372	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	-60387402	True	NA	NA	False	AATAAA	-15	NA	60397986	60347150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
WTC11_00028995	chr15	-	1780	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	10	0	-3	multi-exon	FALSE	canonical	1	6	junction_12	626.999564658248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTCCTGAGTCACACAA	-60387402	True	NA	NA	False	AATAAA	-12	NA	60397986	60347153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
WTC11_00028997	chr15	-	1699	14	FSM	ENSG00000182718.18	ENST00000559956.6	1709	14	0	10	0	-3	multi-exon	FALSE	canonical	1	5	junction_13	573.573878487192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTCCTGAGTCACACAA	-60387402	True	NA	NA	False	AATAAA	-12	NA	60397986	60347153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397942
WTC11_00028999	chr15	-	1828	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	10	0	-3	multi-exon	FALSE	canonical	1	5	junction_13	572.504835771933	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTCCTGAGTCACACAA	-60387402	True	NA	NA	False	AATAAA	-12	NA	60397986	60347153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
WTC11_00029000	chr15	-	1550	13	FSM	ENSG00000182718.18	ENST00000679109.1	1560	13	0	10	0	-3	multi-exon	FALSE	canonical	2	8	junction_12	442.686652410282	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTCCTGAGTCACACAA	-60398122	False	NA	NA	False	AATAAA	-12	NA	60398157	60347153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398114
WTC11_00029002	chr15	-	1446	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	-2	0	0	multi-exon	FALSE	canonical	2	17	junction_12	440.248690767187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	-60387401	True	NA	-5	True	AATAAA	-23	NA	60397985	60347329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
WTC11_00029003	chr15	-	1938	12	FSM	ENSG00000182718.18	ENST00000678796.1	1938	12	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_11	108.4086239746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	-60387493	True	NA	-5	True	AATAAA	-23	NA	60398077	60347329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
WTC11_00029004	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	509.824485403712	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	-60387402	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
WTC11_00029008	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	-60387402	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60396428_60397257_60397339_60397942
WTC11_00029009	chr15	-	7208	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	-2	0	2	multi-exon	TRUE	canonical	3	251	junction_13	43.6874759577108	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGCCATGTCCCCTT	-60473232	True	NA	-1	True	AATAAA	-25	NA	60479142	60419606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
WTC11_00029010	chr15	-	7048	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	18	-6	0	2	multi-exon	FALSE	canonical	3	137	junction_13	63.2304427383589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGCCATGTCCCCTT	-60473232	True	NA	-1	True	AATAAA	-25	NA	60479142	60419606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
WTC11_00029024	chr15	-	6399	4	FSM	ENSG00000129003.19	ENST00000560637.5	3684	4	-2700	-15	-2700	0	multi-exon	TRUE	canonical	3	54	junction_3	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGTTTGTGTTATT	-61867445	False	NA	4	True	AATAAA	-32	NA	61867460	61852388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439
WTC11_00029025	chr15	-	11337	65	ISM	ENSG00000129003.19	ENST00000644861.2	13403	85	77945	8	9246	7	3prime_fragment	TRUE	canonical	2	9	junction_48	16.9206558309659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAAACTTTGTGGGTTT	NA	False	NA	-4	True	AATAAA	-24	NA	61982502	61852396	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439_61863529_61868658_61868774_61869499_61869624_61871988_61872035_61873245_61873410_61874875_61874952_61875731_61875846_61876972_61877055_61878606_61878747_61880608_61880723_61880842_61880955_61881562_61881633_61881746_61881829_61882595_61882737_61884127_61884270_61890164_61890401_61907263_61907391_61908991_61909126_61910176_61910306_61911839_61912005_61913310_61913416_61915632_61916023_61917340_61917636_61918135_61918258_61919288_61919450_61920066_61920332_61920497_61920648_61921946_61922034_61922396_61922763_61925455_61925549_61927090_61927321_61929500_61929749_61931089_61931260_61934218_61934332_61936596_61936751_61940646_61940795_61941762_61942068_61945714_61945883_61946306_61946411_61947192_61947310_61949442_61949606_61950357_61950418_61950944_61951025_61951823_61951981_61954420_61954555_61958607_61958717_61959447_61959596_61961588_61961894_61962370_61962539_61962748_61962853_61963834_61963952_61964698_61964862_61966082_61966143_61967367_61967448_61969298_61969453_61972624_61972765_61973453_61973533_61974287_61974418_61977081_61977200_61978625_61978750_61981341_61981479_61982458
WTC11_00029026	chr15	-	6573	25	FSM	ENSG00000129003.19	ENST00000649766.1	6573	25	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_21	14.0591508357447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTACACATACATATAT	-61920142	False	NA	NA	False	NA	NA	NA	61920152	61865557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_61868774_61869499_61869624_61871988_61872035_61873245_61873410_61874875_61874952_61875731_61875846_61876972_61877055_61878606_61878747_61880608_61880723_61880842_61880955_61881562_61881633_61881746_61881829_61882595_61882737_61884127_61884270_61890164_61890401_61907263_61907391_61908991_61909126_61910176_61910306_61911839_61912005_61913310_61913416_61915632_61916023_61917340_61917636_61918135_61918258_61919288_61919450_61920066
WTC11_00029027	chr15	-	552	5	NNC	ENSG00000185088.14	novel	693	5	NA	NA	0	10624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1938.01096488126	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAGGGAAAACAAAAAC	-63125932	True	NA	NA	False	NA	NA	NA	63157499	63115247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_63115273_63153853_63154061_63155620_63155732_63156412_63156522_63157399
WTC11_00029028	chr15	-	5290	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	820	0	-820	multi-exon	FALSE	canonical	3	4359	junction_3	90.292118519097	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAACATGATGAAACCG	-63125910	True	NA	NA	False	NA	NA	NA	63157477	63149068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
WTC11_00029029	chr15	-	528	4	FSM	ENSG00000185088.14	ENST00000411926.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCCCTCTTTTTCT	-63158011	True	NA	-13	True	AATAAA	-13	NA	63158021	63153858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157915
WTC11_00029030	chr15	-	3946	11	FSM	ENSG00000074410.14	ENST00000178638.8	6098	11	0	2152	0	1158	multi-exon	FALSE	canonical	2	4	junction_3	3.57211421989835	788	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCTTTTTTTTTTTTT	-63381666	True	NA	0	True	TATAAA	-16	NA	63381846	63323529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63326358_63327148_63327234_63328097_63328131_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
WTC11_00029033	chr15	-	12626	67	NNC	ENSG00000103657.14	novel	15197	78	NA	NA	2392	2	intron_retention	FALSE	canonical	0	0	junction_33	22.5151566132381	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	-63747046	False	NA	2	True	AATAAA	-21	NA	63747057	63608615	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63663004_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675094_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917
WTC11_00029037	chr15	-	1171	7	NNC	ENSG00000166794.6	novel	1050	6	NA	NA	-115	96849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2440.5170501806	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACATTCTCCCCTAT	-64163165	False	NA	NA	False	AAAAAG	-3	NA	64163249	64058890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64058917_64102758_64102787_64155819_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
WTC11_00029038	chr15	-	839	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	-13	0	0	multi-exon	FALSE	canonical	3	275	junction_2	472.269932230381	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-64081463	True	NA	-28	True	AATAAA	-18	NA	64093808	64072564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
WTC11_00029039	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_2	98.9504295089213	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-64081493	True	NA	-28	True	AATAAA	-18	NA	64093838	64072564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
WTC11_00029041	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	4932	junction_4	148.211630785172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-64092537	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
WTC11_00029042	chr15	-	852	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	17	0	-17	multi-exon	FALSE	canonical	3	469	junction_4	2071.0942759807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCAACTCTCCTGTGG	-64092541	True	NA	NA	False	NA	NA	NA	64163026	64155756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
WTC11_00029043	chr15	-	8043	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	-5558	0	-51	multi-exon	FALSE	canonical	3	6	junction_3	10.5790673817056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTCCTGTGAGTCAC	-64355059	True	NA	NA	False	ATTAAA	-4	NA	64356071	64165575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
WTC11_00029044	chr15	-	8071	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	3	11	3	-11	multi-exon	FALSE	canonical	3	21	junction_2	6.59701911146427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTCGAGTGCTGAAG	-64355158	True	NA	NA	False	AATAAA	-9	NA	64356170	64165535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
WTC11_00029045	chr15	-	880	5	NNC	ENSG00000166803.14	novel	766	5	NA	NA	0	23322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	424.531727318466	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGACGTGGTGGTGT	-64370772	True	NA	NA	False	GATAAA	-3	NA	64381438	64340981	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64341017_64365587_64366076_64376742_64376906_64380957_64381039_64381325
WTC11_00029046	chr15	-	2143	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	3	-14	0	14	multi-exon	FALSE	canonical	3	861	junction_2	80.8125402809902	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAAATTATGTCCTATT	-64370772	True	NA	-4	True	AATAAA	-41	NA	64381438	64364289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
WTC11_00029047	chr15	-	911	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	467	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTGGAGACCA	-64370778	True	NA	NA	False	NA	NA	NA	64381444	64365364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64366076_64380957_64381039_64381325
WTC11_00029049	chr15	-	1890	6	NNC	ENSG00000180304.14	novel	1934	6	NA	NA	0	88406	intron_retention	FALSE	non_canonical	0	0	junction_1	1205.64329716546	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACAAAATAACTTTTTTT	-64679038	True	NA	NA	False	NA	NA	NA	64703208	64599166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64599198_64687575_64688835_64689083_64689170_64690373_64690550_64691433_64691592_64703028
WTC11_00029050	chr15	-	1935	5	NIC	ENSG00000180304.14	novel	1934	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2769	junction_2	160.184854152944	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	-64679111	False	NA	-21	True	AATAAA	-18	NA	64703281	64687572	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691592_64703028
WTC11_00029052	chr15	-	708	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	-1	0	1	multi-exon	FALSE	canonical	3	2989	junction_1	116.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCCTGCCGGTTAAT	-64679024	True	NA	0	True	ATTAAA	-21	NA	64703194	64690165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64690550_64691433_64691592_64703028
WTC11_00029056	chr15	-	1224	4	Antisense	novelGene_ENSG00000259635.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	7.48331477354788	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACCTGAAGTCAGGAGT	-64736789	False	NA	NA	False	NA	NA	NA	64736800	64704429	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_-_64704650_64731373_64731594_64731727_64731995_64736283
WTC11_00029057	chr15	-	2039	9	NNC	ENSG00000166831.9	novel	2017	8	NA	NA	0	32009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	596.874345549379	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATCATTGATTAACTCT	-64760463	True	NA	NA	False	NA	NA	NA	64775589	64707881	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64707907_64739893_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
WTC11_00029058	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1490	junction_2	180.576853444731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-64760463	True	NA	-12	True	AATAAA	-16	NA	64775589	64739890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
WTC11_00029059	chr15	-	2687	13	FSM	ENSG00000140451.13	ENST00000268043.8	2687	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	80.4478350651319	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816288	True	NA	-5	True	AATAAA	-20	NA	64825668	64815631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
WTC11_00029060	chr15	-	2699	13	NIC	ENSG00000140451.13	novel	2690	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_6	104.096376284458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816267	True	NA	-5	True	AATAAA	-20	NA	64825647	64815631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64820020_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
WTC11_00029061	chr15	-	2692	13	FSM	ENSG00000140451.13	ENST00000559239.2	2690	13	0	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_12	124.000308019331	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGCCTCCTCTCT	-64816267	True	NA	-3	True	AATAAA	-22	NA	64825647	64815629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825568
WTC11_00029062	chr15	-	2279	13	FSM	ENSG00000140451.13	ENST00000333425.10	2278	13	1	-2	1	2	multi-exon	FALSE	canonical	3	47	junction_1	112.007037229314	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGCCTCCTCTCT	-64816287	True	NA	-3	True	AATAAA	-22	NA	64825667	64815629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64815949_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
WTC11_00029068	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	73.827078365597	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-64979879	True	NA	-1	True	AATAAA	-17	NA	64989914	64963021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
WTC11_00029072	chr15	-	2741	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	1	4	1	-4	multi-exon	FALSE	canonical	3	218	junction_1	20.6424168885332	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGGTGTGTGCAAAC	-65026258	True	NA	-9	True	AATAAA	-9	NA	65029638	65001515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
WTC11_00029073	chr15	-	424	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	-3	0	3	multi-exon	FALSE	canonical	3	270	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTCTGTAATATTTT	-65026152	False	NA	NA	False	TATAAA	-36	NA	65029532	65026744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65027041_65029404
WTC11_00029074	chr15	-	2519	5	FSM	ENSG00000103710.11	ENST00000220062.9	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	7.94905654779232	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCTTGCAGTTC	-65067517	True	NA	-4	True	AATAAA	-22	NA	65067991	65053336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65065216_65065274_65067732
WTC11_00029075	chr15	-	568	2	FSM	ENSG00000246922.10	ENST00000561387.1	7377	2	7052	-243	7052	-6	multi-exon	FALSE	canonical	3	13	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCCTGCAGGCACC	-65094543	False	NA	-5	True	AATAAA	-14	NA	65094576	65092765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65093232_65094474
WTC11_00029076	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	14.9164338901763	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-65133475	True	NA	-8	True	AATAAA	-19	NA	65133808	65117378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
WTC11_00029077	chr15	-	519	2	FSM	ENSG00000090470.15	ENST00000559051.1	557	2	0	38	0	-38	multi-exon	FALSE	canonical	3	102	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAGAAATATAGTCATT	NA	False	NA	NA	False	NA	NA	NA	65119774	65119001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65119464_65119717
WTC11_00029078	chr15	-	4867	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	-177	5	-177	-5	multi-exon	FALSE	canonical	3	201	junction_4	31.171030398347	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCCAACGTGGTGGTG	-65185486	False	NA	NA	False	AATAAA	-15	NA	65185519	65148223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
WTC11_00029081	chr15	-	4493	14	NNC	ENSG00000174498.14	novel	4441	14	NA	NA	-57	-2	at_least_one_novel_splicesite	FALSE	canonical	3	148	junction_1	73.8756351407934	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGAGTTTTTGGGTGG	-65374474	True	NA	-8	True	AATAAA	-19	NA	65378059	65327128	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65329146_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
WTC11_00029082	chr15	-	4502	14	FSM	ENSG00000174498.14	ENST00000327987.9	4441	14	-61	0	-61	0	multi-exon	FALSE	canonical	3	302	junction_1	39.3494434296707	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	-65374478	True	NA	-6	True	AATAAA	-21	NA	65378063	65327126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65329149_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
WTC11_00029084	chr15	-	3154	3	FSM	ENSG00000103742.12	ENST00000558048.5	3407	3	236	17	236	-17	multi-exon	FALSE	canonical	2	2	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACTATTTTCCAGAAA	-65385517	False	NA	-46	True	AATGAA	-3	NA	65385534	65381503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65384420_65384953_65385116_65385458
WTC11_00029085	chr15	-	5261	14	FSM	ENSG00000103742.12	ENST00000559327.1	5544	14	266	17	266	-17	multi-exon	FALSE	canonical	2	9	junction_12	8.33897245099548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACTATTTTCCAGAAA	NA	False	NA	-46	True	AATGAA	-3	NA	65396163	65381503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65395093_65395259_65395749
WTC11_00029086	chr15	-	8437	20	FSM	ENSG00000074603.19	ENST00000341861.9	8699	20	258	4	258	0	multi-exon	FALSE	canonical	3	8	junction_19	14.2210487358287	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-65514738	False	NA	-3	True	AATAAA	-18	NA	65517015	65442466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65515655
WTC11_00029087	chr15	-	7285	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	-4	0	0	multi-exon	TRUE	canonical	3	38	junction_4	9.98974543471532	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTTCCTTTTTCTT	-65515412	True	NA	1	True	AATAAA	-22	NA	65517689	65442462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
WTC11_00029091	chr15	-	745	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	-87	-97	-11	97	multi-exon	FALSE	canonical	3	12	junction_1	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGATTTACTTTCT	-65515438	True	NA	NA	False	NA	NA	NA	65517715	65511863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65512109_65512294_65512565_65517485
WTC11_00029092	chr15	-	2612	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	3	0	1	multi-exon	FALSE	canonical	3	82	junction_11	59.7605414470919	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTTGCTTTTGGTCTGT	-65608236	True	NA	18	True	AATAAA	-43	NA	65611136	65578755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
WTC11_00029093	chr15	-	2397	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-92	-1	0	1	multi-exon	FALSE	canonical	3	114	junction_11	51.5083239682338	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTTGCTTTTGGTCTGT	-65608323	True	NA	18	True	AATAAA	-43	NA	65611223	65578755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
WTC11_00029094	chr15	-	2178	11	FSM	ENSG00000138614.16	ENST00000652388.1	2175	11	0	-3	0	0	multi-exon	FALSE	canonical	3	7	junction_10	83.7795321065951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTTTGCTTTTGGTCTG	NA	False	NA	17	True	AATAAA	-42	NA	65611289	65578756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
WTC11_00029095	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	79.9162785059961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	-65608221	True	NA	NA	False	NA	NA	NA	65611121	65579026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
WTC11_00029097	chr15	-	1852	11	FSM	ENSG00000138614.16	ENST00000442903.3	1863	11	11	0	11	0	multi-exon	FALSE	canonical	1	6	junction_9	92.6928260438746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGTGAAGGTGGTTGG	NA	False	NA	NA	False	NA	NA	NA	65611278	65579247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65607158_65607443_65611097
WTC11_00029104	chr15	-	431	4	FSM	ENSG00000174485.16	ENST00000562028.1	481	4	0	50	0	-50	multi-exon	FALSE	canonical	2	3	junction_2	0.816496580927726	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGAATAGTACGCTT	NA	False	NA	NA	False	NA	NA	NA	65701801	65696365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65696498_65697266_65697384_65701050_65701193_65701761
WTC11_00029105	chr15	-	991	1	FSM	ENSG00000259924.1	ENST00000567680.1	964	1	-61	34	-61	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGAGCGGCTTACCGGT	NA	False	NA	NA	False	NA	NA	NA	65772200	65771209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65771200_65772200
WTC11_00029106	chr15	-	211	2	FSM	ENSG00000157890.19	ENST00000474398.1	760	2	549	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCACCCACCACGGGT	NA	False	NA	NA	False	NA	NA	NA	65970689	65965046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65965121_65970552
WTC11_00029107	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	14.5377762665241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	-66352306	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
WTC11_00029109	chr15	-	1543	2	NIC	ENSG00000075131.10	novel	729	2	NA	NA	13	784	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCTGCAATATAATAAAAG	-66386460	True	NA	NA	False	AATAAA	-10	NA	66386694	66378485	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_66379941_66386606
WTC11_00029111	chr15	-	920	4	FSM	ENSG00000174446.13	ENST00000563480.6	920	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	160.513758496481	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCACTGCCACCAAACG	-66497721	False	150775	NA	False	NA	NA	NA	66497750	66490134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66490718_66494414_66494553_66495329_66495420_66497641
WTC11_00029112	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-66497733	False	150775	NA	False	AGTAAA	-20	NA	66497762	66493467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66494553_66495329_66495420_66497641
WTC11_00029114	chr15	-	1164	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	-370	0	-42	multi-exon	FALSE	canonical	3	48	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATTTTGTATTTTTAGT	-66497733	False	150775	NA	False	NA	NA	NA	66497762	66493509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66494553_66497641
WTC11_00029116	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_7	826.499550013694	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-66354080	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00029117	chr15	-	2003	8	FSM	ENSG00000174444.15	ENST00000567229.5	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	9698	junction_7	725.998172820549	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	-66354071	True	NA	-23	True	AATAAA	-27	NA	66504846	66499319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501505_66501787_66501913_66502611_66503165_66503357_66503530_66504787
WTC11_00029118	chr15	-	1110	5	FSM	ENSG00000174444.15	ENST00000564647.5	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	10831	junction_3	346.810737290529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTGGAGTTTTTGTT	-66502378	False	NA	79	True	NA	NA	NA	66502407	66500057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787
WTC11_00029119	chr15	-	1099	6	FSM	ENSG00000174444.15	ENST00000566039.5	1099	6	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_3	891.988251043701	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGATGAATTGTACGG	-66354071	True	NA	NA	False	NA	NA	NA	66504846	66501007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00029120	chr15	-	582	5	FSM	ENSG00000174444.15	ENST00000564439.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	668	junction_1	4095.55881413025	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCCTTCAGAAACATC	-66354070	True	NA	NA	False	NA	NA	NA	66504845	66501398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66501505_66502611_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00029121	chr15	-	817	5	FSM	ENSG00000174444.15	ENST00000566622.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_2	983.600020333469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCAGAGATTCTA	-66354058	True	NA	NA	False	ATTAAA	-9	NA	66504833	66501559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00029122	chr15	-	819	4	FSM	ENSG00000174444.15	ENST00000566624.5	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_1	622.461779281802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGATTAAATTTTAAT	-66354071	True	NA	NA	False	NA	NA	NA	66504846	66502269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00029124	chr15	-	593	2	FSM	ENSG00000174444.15	ENST00000566491.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	9698	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGATGATAATACGG	-66354071	True	NA	NA	False	NA	NA	NA	66504846	66502995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66503530_66504787
WTC11_00029125	chr15	-	3302	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	-170	0	170	multi-exon	FALSE	canonical	3	329	junction_5	32.0061722442468	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGGGAAGACAAGAATA	-67250092	True	NA	-37	True	NA	NA	NA	67254661	67200496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
WTC11_00029126	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	112.289088989861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-67250106	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
WTC11_00029128	chr15	-	286	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	-15	3464	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	9	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTCTACAGGTAGTA	-67521236	False	NA	-4	True	AATAAA	-16	NA	67521556	67514921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_67515067_67518999_67519103_67521518
WTC11_00029129	chr15	-	1627	1	FSM	ENSG00000270964.1	ENST00000604760.1	1533	1	-88	-6	-88	6	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATGTACTTTTATTAAA	-67542676	False	NA	NA	False	AATAAA	-16	NA	67542692	67541065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67541100_67542700
WTC11_00029130	chr15	-	3389	3	FSM	ENSG00000260007.3	ENST00000562767.2	3389	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	37	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGCTTTGTATTTA	-68220617	True	NA	-109	True	NA	NA	NA	68229718	68191129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68194113_68197439_68197629_68229501
WTC11_00029135	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.5715195861619	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-68220627	True	NA	-15	True	AGTAAA	-18	NA	68229728	68206991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
WTC11_00029136	chr15	-	1116	1	FSM	ENSG00000128973.13	ENST00000635754.1	1441	1	44	281	44	-281	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCGAGGGCCGCGTGGG	-68215516	False	NA	NA	False	NA	NA	NA	68215564	68214448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68214400_68215600
WTC11_00029137	chr15	-	2452	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	-12	0	12	multi-exon	FALSE	canonical	3	2353	junction_4	227.622250425763	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGGTGTTTTATTTTGT	-68780431	True	NA	1	True	TATAAA	-30	NA	68820895	68778522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
WTC11_00029139	chr15	-	721	3	FSM	ENSG00000140350.15	ENST00000495420.5	707	3	0	-14	0	14	multi-exon	FALSE	canonical	3	2910	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAATTTCTGGTCTCCTG	-68780433	True	NA	NA	False	NA	NA	NA	68820897	68787164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68787536_68787769_68787920_68820697
WTC11_00029142	chr15	-	5914	20	FSM	ENSG00000140332.18	ENST00000558939.5	6004	20	88	2	88	-2	multi-exon	FALSE	canonical	3	27	junction_8	30.3225504156875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAAAGTGTCTGTGAA	-70098002	False	NA	-6	True	ATTAAA	-20	NA	70098088	70047791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
WTC11_00029149	chr15	-	4400	20	FSM	ENSG00000140332.18	ENST00000558379.5	2304	20	-1090	-1006	0	0	multi-exon	FALSE	canonical	3	27	junction_8	30.8652688299421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTTAGAAGACAGCA	-70093758	True	NA	77	True	AAAAAG	-3	NA	70097888	70049090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
WTC11_00029151	chr15	-	4026	16	FSM	ENSG00000137831.15	ENST00000539319.5	4026	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	50.9031324074353	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACTGTGCTGGTATAAT	-70760769	True	NA	-67	True	NA	NA	NA	70763430	70656976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
WTC11_00029154	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	-70851761	True	NA	3	True	AATAAA	-36	NA	70854121	70851426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70851721_70853888
WTC11_00029156	chr15	-	646	1	FSM	ENSG00000259781.1	ENST00000569046.1	646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCTAGCGCAGTTTT	NA	False	NA	-110	True	NA	NA	NA	71165415	71164769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71164800_71165400
WTC11_00029157	chr15	-	587	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	-32	0	32	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGGAGAGAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	71341712	71341125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71341100_71341700
WTC11_00029158	chr15	-	4784	19	FSM	ENSG00000066933.16	ENST00000561618.5	4784	19	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	5.87130498460285	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCGTGATTGTTTCC	NA	False	NA	NA	False	AAAACA	-30	NA	71898838	71825991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71827044_71827883_71828027_71830108_71830312_71848844_71848969_71850035_71850168_71851252_71851359_71852131_71852261_71854376_71854570_71859734_71859797_71862499_71862612_71875790_71875839_71878039_71878232_71879720_71879838_71880334_71880559_71883593_71883737_71888003_71888117_71892964_71893178_71893678_71893779_71897460
WTC11_00029162	chr15	-	513	2	FSM	ENSG00000066933.16	ENST00000569314.1	560	2	47	0	-26	0	multi-exon	FALSE	canonical	2	11	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCCTCAACAGAAAGACT	-72116644	True	NA	NA	False	NA	NA	NA	72118176	72046141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72046635_72118156
WTC11_00029163	chr15	-	488	6	FSM	ENSG00000175318.12	ENST00000568594.5	623	6	135	0	135	0	multi-exon	FALSE	canonical	3	10	junction_1	4.63033476111609	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCACCTACAGGTATGG	NA	False	NA	NA	False	NA	NA	NA	72169939	72166645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846
WTC11_00029165	chr15	-	3016	3	FSM	ENSG00000067225.20	ENST00000564440.5	3016	3	0	0	0	0	multi-exon	FALSE	canonical	3	9602	junction_2	399.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72204403	False	NA	-4	True	AATAAA	-17	NA	72204559	72199028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72202453
WTC11_00029166	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	1	2003	junction_4	2785.53535429009	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72176175	True	NA	-4	True	AATAAA	-17	NA	72231190	72199028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
WTC11_00029167	chr15	-	2717	11	FSM	ENSG00000067225.20	ENST00000319622.10	2717	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4511.89498548005	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72231374	False	NA	-4	True	AATAAA	-17	NA	72231386	72199028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230899
WTC11_00029168	chr15	-	2503	11	FSM	ENSG00000067225.20	ENST00000565184.6	2503	11	0	0	0	0	multi-exon	FALSE	canonical	1	99	junction_10	4498.60654091909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCCTCTCTTTTCT	-72176156	True	NA	-7	True	AATAAA	-14	NA	72231171	72199031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230895
WTC11_00029169	chr15	-	2305	2	FSM	ENSG00000067225.20	ENST00000565143.1	2301	2	0	-4	0	0	multi-exon	FALSE	canonical	3	10401	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCCTCTCTTTTCT	-72201897	False	NA	-7	True	AATAAA	-14	NA	72202053	72199031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473
WTC11_00029170	chr15	-	626	2	FSM	ENSG00000067225.20	ENST00000570166.1	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTGACAAAGCTCTGA	-72206698	False	NA	NA	False	NA	NA	NA	72206854	72202689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72203189_72206727
WTC11_00029171	chr15	-	663	2	FSM	ENSG00000067225.20	ENST00000564993.1	663	2	0	0	0	0	multi-exon	FALSE	canonical	1	2003	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCGCTCCCGCAGGGG	-72206776	True	NA	NA	False	NA	NA	NA	72207167	72206258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72206881_72207126
WTC11_00029173	chr15	-	753	4	FSM	ENSG00000067225.20	ENST00000564276.1	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	10506	junction_2	336.210582158795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCATAACTGAAACATAT	-72176175	True	NA	NA	False	NA	NA	NA	72231190	72210059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72210479_72217408_72217501_72218943_72219111_72231115
WTC11_00029176	chr15	-	2751	19	FSM	ENSG00000137817.17	ENST00000413097.6	2750	19	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_12	37.2989259435605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-72267140	False	NA	-7	True	AATAAA	-31	NA	72267649	72241180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744
WTC11_00029177	chr15	-	2788	24	FSM	ENSG00000137817.17	ENST00000569795.6	2788	24	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	48.3742889730525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-72272045	False	NA	-7	True	AATAAA	-31	NA	72272554	72241180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
WTC11_00029178	chr15	-	2803	4	FSM	ENSG00000137817.17	ENST00000566991.5	3657	4	854	0	854	0	multi-exon	FALSE	canonical	3	150	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-44	True	NA	NA	NA	72244933	72241217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619
WTC11_00029183	chr15	-	4772	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	7	6	2	-6	multi-exon	FALSE	canonical	3	221	junction_5	30.2543458661228	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATCTTTTCTAGCCGA	-72374365	True	NA	-19	True	AATAAA	-22	NA	72376007	72340929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
WTC11_00029190	chr15	-	868	6	NIC	ENSG00000213614.11	novel	3585	10	NA	NA	-1	-10	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	112.380425341783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATAATAAACATGGATT	-72374346	True	NA	-41	True	AATAAA	-17	NA	72375988	72343896	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72344141_72345445_72345551_72346234_72346326_72355558_72355625_72356524_72356618_72375719
WTC11_00029193	chr15	-	2463	12	FSM	ENSG00000213614.11	ENST00000684520.1	2451	12	0	-12	0	0	multi-exon	FALSE	canonical	3	221	junction_3	32.1882376750902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACATAGCATTTATATT	-72374367	True	NA	0	True	AATAAA	-19	NA	72376009	72345229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
WTC11_00029200	chr15	-	2333	1	FSM	ENSG00000261423.2	ENST00000565181.1	2325	1	-41	33	-41	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGATTTACAAAGTAAAG	-72475183	False	NA	NA	False	TTTAAA	-26	NA	72475209	72472876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72472900_72475200
WTC11_00029202	chr15	-	4579	2	FSM	ENSG00000159322.18	ENST00000562621.1	4576	2	0	-3	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72758590	False	NA	-2	True	ATTAAA	-19	NA	72758610	72751368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555
WTC11_00029203	chr15	-	2718	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	-2	0	2	multi-exon	FALSE	canonical	3	32	junction_6	85.9088664419065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTGTAATTGATTTT	-72780179	True	NA	0	True	ATTAAA	-21	NA	72783731	72751366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
WTC11_00029204	chr15	-	2559	7	FSM	ENSG00000159322.18	ENST00000311669.12	2557	7	0	-2	0	2	multi-exon	FALSE	canonical	3	103	junction_1	53.8547429047186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTGTAATTGATTTT	NA	False	NA	0	True	ATTAAA	-21	NA	72783785	72751366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
WTC11_00029205	chr15	-	2239	5	FSM	ENSG00000159322.18	ENST00000569534.5	2262	5	23	0	5	0	multi-exon	FALSE	canonical	3	14	junction_4	91.3153875313465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72780201	True	NA	-2	True	ATTAAA	-19	NA	72783753	72751368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72783458
WTC11_00029210	chr15	-	2464	9	FSM	ENSG00000156642.17	ENST00000345330.9	2420	9	0	-44	0	44	multi-exon	FALSE	canonical	3	11	junction_8	540.487916146143	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCATTTTTCAATACTT	-73632288	True	NA	28	True	NA	NA	NA	73633389	73559969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73597021_73597370_73633124
WTC11_00029211	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	485.939255463067	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-73631972	True	NA	NA	False	NA	NA	NA	73633245	73560816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
WTC11_00029215	chr15	-	7089	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	43	18	43	-18	multi-exon	FALSE	canonical	3	14	junction_2	5.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTGTTGAATGAATA	-73753210	True	NA	-51	True	NA	NA	NA	73753308	73735475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73740643_73750974_73751698_73752109
WTC11_00029216	chr15	-	598	2	FSM	ENSG00000205363.7	ENST00000558834.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTAGGGGCCGGGGA	NA	False	NA	NA	False	NA	NA	NA	73740615	73739926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73740477_73740567
WTC11_00029218	chr15	-	565	4	FSM	ENSG00000261801.7	ENST00000568087.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.9679979508749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTGGAGGTTATGTC	-73926787	True	NA	NA	False	NA	NA	NA	73927942	73909771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73909851_73912184_73912304_73919837_73920039_73927776
WTC11_00029219	chr15	-	885	3	FSM	ENSG00000261801.7	ENST00000565756.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	35	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGCATACAAGCACTCA	-73926804	True	NA	NA	False	TTTAAA	-34	NA	73927959	73918760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73919384_73919959_73920039_73927776
WTC11_00029221	chr15	-	709	3	FSM	ENSG00000261801.7	ENST00000565416.1	588	3	0	-121	0	0	multi-exon	FALSE	canonical	3	22	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGACTGACTTATGTGG	-73926785	True	NA	NA	False	NA	NA	NA	73927940	73919039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73919384_73919837_73920039_73927776
WTC11_00029222	chr15	-	3586	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	2694	0	1586	multi-exon	FALSE	canonical	3	18	junction_4	5.19615242270663	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGGCAGTCAGGCAA	-73992064	True	NA	NA	False	NA	NA	NA	73992295	73981619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
WTC11_00029223	chr15	-	1903	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	-12	0	0	multi-exon	FALSE	canonical	3	11	junction_4	7.19444229944198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992281	False	NA	NA	False	AATAAA	-32	NA	73992348	73983205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
WTC11_00029226	chr15	-	2667	19	FSM	ENSG00000137868.19	ENST00000616000.4	2843	19	177	-1	18	1	multi-exon	FALSE	canonical	1	1	junction_18	26.4533131720353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCCTCATAGCGGGAG	-74203026	False	NA	-7	True	AATAAA	-14	NA	74203038	74179467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74203002
WTC11_00029227	chr15	-	2867	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	-3	0	3	multi-exon	FALSE	canonical	3	13	junction_18	24.2441287279576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATAGCGGGAGGGGTA	-74208838	True	NA	-2	True	AATAAA	-19	NA	74209030	74179462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
WTC11_00029229	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	43.1712867540452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-74208786	True	NA	NA	False	AATAAA	-20	NA	74208978	74194386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
WTC11_00029233	chr15	-	469	3	FSM	ENSG00000138629.16	ENST00000565494.5	458	3	0	-11	0	11	multi-exon	FALSE	canonical	3	45	junction_2	295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGACCTTTCTGGCT	-74449278	False	33	8	True	AATATA	-29	NA	74449311	74445965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448559_74449185
WTC11_00029234	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	114.592495391278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453795	True	NA	-3	True	AATATA	-18	NA	74461160	74445976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
WTC11_00029235	chr15	-	1731	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	-11	0	11	multi-exon	TRUE	canonical	3	73	junction_10	168.281341805917	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGACCTTTCTGGCT	-74453737	True	NA	8	True	AATATA	-29	NA	74461102	74445965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
WTC11_00029237	chr15	-	1368	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	3	-11	3	11	multi-exon	FALSE	canonical	3	255	junction_10	114.882766331596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGACCTTTCTGGCT	-74453814	True	NA	8	True	AATATA	-29	NA	74461179	74445965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
WTC11_00029238	chr15	-	711	5	NIC	ENSG00000138629.16	novel	1477	12	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	263.767298010955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453758	True	NA	-3	True	AATATA	-18	NA	74461123	74445976	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74446228_74456551_74456672_74458683_74458897_74460667_74460779_74461107
WTC11_00029240	chr15	-	3875	9	NNC	ENSG00000179151.13	novel	3810	9	NA	NA	-17	41536	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	146.492107295922	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGCTTGTTTGCACAT	-74689190	True	NA	NA	False	NA	NA	NA	74696046	74589021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_74589051_74630559_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
WTC11_00029241	chr15	-	3742	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	2	0	-2	multi-exon	FALSE	canonical	3	215	junction_6	47.2605073560955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTGTGCCGTGTGACT	-74689168	True	NA	-3	True	AATAAA	-16	NA	74696024	74630559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
WTC11_00029251	chr15	-	2580	16	FSM	ENSG00000140474.14	ENST00000440863.7	2580	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_11	31.4851640547664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840926	True	NA	-3	True	ATTAAA	-13	NA	74843156	74836117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
WTC11_00029254	chr15	-	1470	16	FSM	ENSG00000140474.14	ENST00000568667.5	1470	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	58.9450214653923	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGATGTGAGCCATCT	-74842666	False	2230	NA	False	NA	NA	NA	74842676	74837212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842538
WTC11_00029256	chr15	-	886	5	FSM	ENSG00000140474.14	ENST00000565011.5	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	95.8758963452233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGATCCGTAGCAACC	-74842666	False	2230	NA	False	NA	NA	NA	74842676	74840264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534
WTC11_00029257	chr15	-	1004	4	FSM	ENSG00000140474.14	ENST00000562395.5	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	28.8251433455046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCCTCCAGGTCGTT	-74840981	True	NA	NA	False	NA	NA	NA	74843211	74840296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842421_74843003
WTC11_00029258	chr15	-	916	4	FSM	ENSG00000140474.14	ENST00000564767.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	107.809502776374	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCTCTTCGGGCAGC	-74842666	False	2230	NA	False	NA	NA	NA	74842676	74840318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842421_74842534
WTC11_00029267	chr15	-	875	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	-12	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	77.2521125205576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGAGCTGTGTCTGTGT	-74902926	True	NA	-13	True	AATAAA	-12	NA	74906805	74899993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
WTC11_00029268	chr15	-	4707	3	FSM	ENSG00000178761.15	ENST00000566894.1	4706	3	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902917	True	NA	-11	True	AATAAA	-14	NA	74906796	74899991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902787_74904663_74906366_74906586
WTC11_00029270	chr15	-	3275	5	FSM	ENSG00000178761.15	ENST00000357635.10	3275	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.1091086130282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902972	True	NA	-11	True	AATAAA	-14	NA	74906851	74899991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
WTC11_00029271	chr15	-	857	7	NIC	ENSG00000178761.15	novel	865	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	77.2521125205576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGTTGAGCTGTGTCTG	-74902914	True	NA	-16	True	AATAAA	-9	NA	74906793	74899996	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74900138_74901949_74902064_74902603_74902784_74904663_74904713_74905153_74905232_74906277_74906366_74906586
WTC11_00029273	chr15	-	673	5	FSM	ENSG00000178761.15	ENST00000563413.5	673	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.1139212451745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTTAGAGAAAAACTGCT	-74902926	True	NA	NA	False	NA	NA	NA	74906805	74901919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906586
WTC11_00029279	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2145.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896927	True	NA	-5	True	AATAAA	-24	NA	74938070	74920274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74929115_74929233_74937914
WTC11_00029280	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	1784.79024600154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896937	True	NA	-5	True	AATAAA	-24	NA	74938080	74920274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
WTC11_00029283	chr15	-	503	1	FSM	ENSG00000275645.1	ENST00000617892.1	418	1	-44	-41	-44	41	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGATTTGTCTAATTTA	-75347081	False	NA	NA	False	AAGAAA	-42	NA	75347205	75346702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75346700_75347200
WTC11_00029284	chr15	-	3177	26	FSM	ENSG00000140400.18	ENST00000569482.5	3177	26	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_3	38.0052627934606	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365393	True	NA	0	True	AATAAA	-16	NA	75368592	75355791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356033_75356109_75356220_75356300_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
WTC11_00029304	chr15	-	6872	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	-149	0	149	multi-exon	FALSE	canonical	3	202	junction_20	50.4325291850409	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCCTGTATGGTGAAATA	-75449190	False	2500	NA	False	AATGAA	-43	NA	75451690	75369229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
WTC11_00029305	chr15	-	5047	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	3	0	3	0	multi-exon	FALSE	canonical	3	38	junction_20	72.0558117017635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-75453280	True	NA	41	True	AATAAA	-23	NA	75455780	75370932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
WTC11_00029306	chr15	-	602	5	FSM	ENSG00000169375.16	ENST00000564778.5	617	5	15	0	-12	0	multi-exon	FALSE	canonical	3	16	junction_4	108.287522365229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGATAATGGGATTCAAC	-75453327	True	NA	NA	False	NA	NA	NA	75455827	75412989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455787
WTC11_00029310	chr15	-	7833	13	FSM	ENSG00000169410.11	ENST00000618819.5	7839	13	0	6	0	-6	multi-exon	FALSE	canonical	3	165	junction_4	23.6800138419629	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCCAGTGGAAGTCT	-75579169	False	NA	-8	True	AATAAA	-14	NA	75579315	75463256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713
WTC11_00029312	chr15	-	545	4	FSM	ENSG00000169410.11	ENST00000561731.1	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	80.9705021734596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTCTCTTTTTTCAGAG	NA	False	NA	0	True	AATAAA	-13	NA	75524274	75513190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75513439_75517258_75517365_75523120_75523246_75524208
WTC11_00029313	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	157.182444909266	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-75622493	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
WTC11_00029314	chr15	-	2180	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	-334	-426	100	423	multi-exon	FALSE	canonical	3	200	junction_8	72.3911898990478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAGAGGCTGGAGAGA	-75626045	False	NA	NA	False	NA	NA	NA	75626059	75597659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
WTC11_00029315	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	110.929031366906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	-75622392	True	NA	NA	False	NA	NA	NA	75625693	75598121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
WTC11_00029319	chr15	-	1140	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	-8	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGGTTTTCTTTTTT	-75628161	True	NA	0	True	AATAAA	-34	NA	75640224	75639084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75639100_75640200
WTC11_00029320	chr15	-	8290	10	FSM	ENSG00000173546.7	ENST00000308508.5	8290	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	3.2659863237109	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGCCTGAGTTTCGA	-75712660	True	NA	-6	True	AATAAA	-17	NA	75712848	75674321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75677385_75677702_75677887_75682292_75682460_75682606_75682742_75682842_75683042_75684735_75684913_75685218_75685702_75687275_75690813_75693069_75693234_75712667
WTC11_00029321	chr15	-	2275	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	14	0	-10	multi-exon	TRUE	canonical	3	649	junction_11	92.6840362657583	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTGTATCTTTG	-76303855	True	NA	-14	True	TATAAA	-5	NA	76311469	76215366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
WTC11_00029322	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	220.114152202897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	-76303790	True	NA	NA	False	NA	NA	NA	76311404	76216083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
WTC11_00029324	chr15	-	1289	11	FSM	ENSG00000140374.17	ENST00000267950.12	1289	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	275.553189057938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTTTATTTATT	-76303834	True	NA	-23	True	AAGAAA	-7	NA	76311448	76216249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76295590_76295738_76311349
WTC11_00029326	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	285.56376987753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	-76303852	True	NA	-85	True	NA	NA	NA	76311466	76216467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
WTC11_00029336	chr15	-	6255	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	0	93	0	-93	multi-exon	FALSE	canonical	3	927	junction_5	56.2069588416081	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAATCGCTTGAACCGG	-77060515	True	NA	NA	False	NA	NA	NA	77071109	77041496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
WTC11_00029337	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	373.404048362271	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	-77060528	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
WTC11_00029338	chr15	-	638	2	FSM	ENSG00000140391.15	ENST00000560514.1	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAAGTTGTTGTAGTG	-77060515	True	NA	NA	False	TTTAAA	-45	NA	77071109	77055835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77056256_77070891
WTC11_00029341	chr15	-	398	2	FSM	ENSG00000140391.15	ENST00000559373.1	393	2	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGACAGATTGCTCT	-77060498	True	NA	NA	False	NA	NA	NA	77071092	77069861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77070059_77070891
WTC11_00029343	chr15	-	520	5	FSM	ENSG00000173517.11	ENST00000567808.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	6.29980158417708	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCATGCACTGAAAGA	-77417953	True	NA	NA	False	NA	NA	NA	77420100	77181978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77182041_77252366_77252527_77284957_77285079_77286422_77286505_77420005
WTC11_00029348	chr15	-	6132	13	FSM	ENSG00000167202.12	ENST00000300584.8	6126	13	0	-6	0	6	multi-exon	FALSE	canonical	3	37	junction_2	9.0011573329952	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAATTCAGTTATAGTC	-78077107	True	NA	1	True	AATAAA	-25	NA	78077711	77994978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77998356_78001618_78001741_78003304_78003491_78008996_78009115_78012822_78013318_78016545_78016740_78017846_78017958_78024155_78024540_78025258_78025498_78030006_78030171_78044899_78045069_78054033_78054188_78077292
WTC11_00029350	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	96.0362431585076	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-78129919	True	NA	28	True	NA	NA	NA	78131445	78104605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
WTC11_00029351	chr15	-	1511	5	FSM	ENSG00000136425.14	ENST00000539011.5	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	205.784474633049	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	-78131443	False	NA	-15	True	AGTAAA	-16	NA	78131535	78104648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78131164
WTC11_00029360	chr15	-	387	2	FSM	ENSG00000103740.10	ENST00000560183.1	675	2	288	0	288	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTTTCCTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	78174524	78173592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78173840_78174384
WTC11_00029363	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	247.425059361416	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290066	True	NA	-4	True	CATAAA	-17	NA	78299605	78283234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
WTC11_00029364	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_10	80.8609299971253	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290070	True	NA	-4	True	CATAAA	-17	NA	78299609	78283234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
WTC11_00029366	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	271.709604863354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	-78290052	True	NA	-25	True	NA	NA	NA	78299591	78283255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
WTC11_00029382	chr15	-	1849	12	FSM	ENSG00000103811.18	ENST00000678886.1	1881	12	32	0	-4	0	multi-exon	FALSE	canonical	3	5	junction_11	23.5757965256358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTGTGGCCTCCCCA	-78944018	True	NA	NA	False	NA	NA	NA	78945062	78921482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944777
WTC11_00029385	chr15	-	849	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	99	0	99	0	multi-exon	FALSE	canonical	2	8	junction_2	406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	NA	False	NA	-1	True	ATTAAA	-34	NA	79897280	79844975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79845443_79889092_79889355_79897160
WTC11_00029386	chr15	-	953	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	253	junction_2	283.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	-79891476	True	NA	-1	True	ATTAAA	-34	NA	79897014	79844975	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_79845443_79889092_79889355_79896790
WTC11_00029388	chr15	-	2194	1	FSM	ENSG00000286813.1	ENST00000655674.1	2194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	581	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACCCATGACCCTCAGT	-79891157	False	5538	NA	False	ATTAAA	-24	NA	79896695	79894501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79894500_79896700
WTC11_00029390	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	92.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918662	True	NA	-16	True	AATAAA	-23	NA	79923702	79898903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79899126_79907628_79907685_79923451
WTC11_00029393	chr15	-	2544	1	FSM	ENSG00000278600.1	ENST00000618835.1	2261	1	-295	12	-295	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTGTAACAATGGCGG	-79917710	False	NA	NA	False	AATAAA	-4	NA	79922750	79920206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79920200_79922800
WTC11_00029394	chr15	-	1014	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	-16	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.06217782649107	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAAGAGGCCTGAGAGA	-80403920	True	NA	-5	True	AATAAA	-25	NA	80404214	80344852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
WTC11_00029395	chr15	-	981	4	FSM	ENSG00000117899.11	ENST00000560244.5	981	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.34209919681348	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCCTAGGAACCTGCCT	-80978795	False	NA	NA	False	NA	NA	NA	80978813	80948501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_80948899_80951958_80952297_80970461_80970660_80978765
WTC11_00029396	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	37	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	-80980268	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_80979478_80981949_80982183_80989578
WTC11_00029403	chr15	-	3564	20	FSM	ENSG00000140598.15	ENST00000650113.1	3546	20	0	-18	0	10	multi-exon	FALSE	canonical	2	2	junction_10	53.3709643326314	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATGTTTTCCAAGTG	-82258378	True	NA	-3	True	AATAAA	-35	NA	82262638	82130222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227580_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
WTC11_00029407	chr15	-	708	1	FSM	ENSG00000237550.6	ENST00000690032.1	694	1	4	-18	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTTTGTTCAA	NA	False	NA	-13	True	AATAAA	-24	NA	82372912	82372204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82372200_82372900
WTC11_00029411	chr15	-	498	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	-10	0	10	multi-exon	FALSE	canonical	3	9563	junction_4	1855.80636112715	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCAGTTGTGTGTGGG	-82433674	True	NA	0	True	AATAAA	-28	NA	82540457	82536739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
WTC11_00029412	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	2126.36878791573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-82433676	True	NA	-15	True	AATAAA	-13	NA	82540459	82536754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
WTC11_00029418	chr15	-	331	2	FSM	ENSG00000214575.10	ENST00000570205.1	569	2	0	238	0	39	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAACTCATTTGGGAA	-82571422	False	NA	NA	False	NA	NA	NA	82571447	82557759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82557987_82571343
WTC11_00029419	chr15	-	400	3	FSM	ENSG00000214575.10	ENST00000568994.1	554	3	154	0	-101	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCAGCTCTGGATCAGA	NA	False	NA	NA	False	NA	NA	NA	82571924	82557798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82557987_82571343_82571533_82571901
WTC11_00029420	chr15	-	3697	26	FSM	ENSG00000103723.17	ENST00000668990.2	3697	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	7.78244177620366	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-82709428	True	NA	-2	True	AATAAA	-15	NA	82709875	82659280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
WTC11_00029422	chr15	-	1005	1	ISM	ENSG00000103942.13	ENST00000558090.2	10341	2	6255	5522	6255	-5522	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTAGCTGGCTGTGG	NA	False	NA	NA	False	AATACA	-18	NA	82843472	82842467	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_82842500_82843500
WTC11_00029423	chr15	-	2250	9	FSM	ENSG00000103942.13	ENST00000304231.12	1990	9	-151	-109	-151	109	multi-exon	FALSE	canonical	2	13	junction_5	30.2438010177292	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGTCAAACCCAAGCT	-82952816	False	NA	98	True	NA	NA	NA	82952879	82848873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859169_82864166_82864260_82875272_82875405_82892684_82892842_82952530
WTC11_00029424	chr15	-	1951	9	FSM	ENSG00000103942.13	ENST00000450735.7	1949	9	0	-2	0	2	multi-exon	FALSE	canonical	3	82	junction_6	12.9903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACACAGAATTTAGTGTT	-82951342	True	NA	-9	True	AATAAA	-19	NA	82952720	82848980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82952530
WTC11_00029425	chr15	-	518	1	FSM	ENSG00000103942.13	ENST00000619240.1	518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCAGATTTGATGCCCT	-82986017	False	NA	NA	False	AATACA	-18	NA	82986070	82985552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82985600_82986100
WTC11_00029428	chr15	-	11267	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_3	79.2646761734941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAGTACCTTATATAA	-83008586	True	NA	-16	True	AATAAA	-13	NA	83011639	82994823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
WTC11_00029429	chr15	-	2687	4	FSM	ENSG00000169609.14	ENST00000508990.2	631	4	-22	-2034	0	2034	multi-exon	FALSE	canonical	0	0	junction_3	83.8265404802613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCAGAAGCTTTCAGTC	-83008554	True	NA	NA	False	NA	NA	NA	83011607	83002651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011496
WTC11_00029432	chr15	-	3214	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	-20	0	20	multi-exon	FALSE	canonical	3	327	junction_4	53.9516034071656	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTCTAAAAGTGAATA	-83063115	True	NA	NA	False	AATAAA	-42	NA	83067252	83016402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
WTC11_00029433	chr15	-	1467	7	FSM	ENSG00000064726.10	ENST00000379403.2	1467	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	160.562985218332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAGAAACAGTTTCTT	-83063014	False	NA	NA	False	AAAAAG	-32	NA	83067151	83017960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83018226_83018706_83018854_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
WTC11_00029434	chr15	-	797	6	FSM	ENSG00000064726.10	ENST00000559652.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	153.765535800452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTACACAGCATG	NA	False	NA	NA	False	NA	NA	NA	83056479	83018739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83018854_83020674_83020763_83028615_83028729_83030135_83030329_83041727_83041926_83056388
WTC11_00029435	chr15	-	3397	4	FSM	ENSG00000166503.9	ENST00000568294.5	3397	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	247.28930425718	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGACTATTGAATGCA	-83157963	False	NA	NA	False	AATAAA	-18	NA	83157989	83112737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83115742_83151214_83151362_83157414_83157574_83157902
WTC11_00029436	chr15	-	934	7	FSM	ENSG00000166503.9	ENST00000563790.5	934	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	237.424139931521	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTCCTCTCTGTTGTG	-83203940	True	NA	NA	False	NA	NA	NA	83207541	83139131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83192251_83192309_83207330
WTC11_00029446	chr15	-	492	5	FSM	ENSG00000259244.1	ENST00000560239.1	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	9.01041064547005	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTTCAAACTCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	84526949	84513240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84513303_84513966_84514048_84514232_84514293_84514914_84515035_84526780
WTC11_00029447	chr15	-	5331	8	FSM	ENSG00000177082.13	ENST00000434634.7	5331	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_7	25.4990996239603	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCATCTCCCTAAAATG	-84650800	True	NA	-5	True	AATAAA	-20	NA	84654283	84639284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
WTC11_00029449	chr15	-	1639	8	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	54	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	38.8292967450389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGTAGCAATTAAGGAAA	-84654167	False	NA	-32	True	AATAAA	-18	NA	84654177	84643078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654025
WTC11_00029450	chr15	-	2006	7	FSM	ENSG00000177082.13	ENST00000559126.5	2031	7	25	0	10	0	multi-exon	FALSE	canonical	3	56	junction_2	19.672315572906	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84650738	True	NA	-35	True	AATAAA	-15	NA	84654221	84643081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631
WTC11_00029457	chr15	-	661	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	-6	0	3	multi-exon	FALSE	canonical	3	221	junction_2	7.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTCTCCTTTCACCC	-84656634	True	NA	5	True	AATAAA	-24	NA	84658199	84655125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84655410_84657175_84657349_84657995
WTC11_00029458	chr15	-	1020	3	FSM	ENSG00000197696.10	ENST00000394588.3	1017	3	0	-3	0	3	multi-exon	FALSE	canonical	3	53	junction_1	84	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTCTCCTTTCACCC	NA	False	NA	5	True	AATAAA	-24	NA	84658563	84655125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84655405_84657175_84657349_84657995
WTC11_00029459	chr15	-	1028	7	NNC	ENSG00000140612.14	novel	1089	7	NA	NA	0	10928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	430.143257790032	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTACCCGGGAGGAGA	-84693733	True	NA	NA	False	NA	NA	NA	84716063	84658609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_84658635_84669543_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
WTC11_00029460	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	526.254928718012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693781	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
WTC11_00029461	chr15	-	1085	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	-6	0	0	multi-exon	FALSE	canonical	3	1052	junction_5	54.6721135497797	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-84693809	True	NA	-6	True	AATAAA	-24	NA	84716139	84669537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
WTC11_00029462	chr15	-	3651	2	FSM	ENSG00000140612.14	ENST00000558924.1	3626	2	-24	-1	-24	0	multi-exon	FALSE	canonical	3	1151	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	-84673701	False	NA	-13	True	AATAAA	-17	NA	84673850	84669544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724
WTC11_00029463	chr15	-	1377	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	-394	-101	3	94	multi-exon	FALSE	canonical	3	26	junction_2	480.768330383772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTTCAGCTAAGAAGGT	-84715638	True	NA	88	True	TATAAA	-15	NA	84716457	84669443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
WTC11_00029464	chr15	-	844	5	FSM	ENSG00000229212.8	ENST00000560811.5	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	48.5231903320464	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGAGCCCTCAGGTG	NA	False	NA	NA	False	NA	NA	NA	85234795	85208774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_85208930_85209024_85209116_85209198_85209291_85209385_85209575_85234478
WTC11_00029466	chr15	-	3653	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	-3	0	3	multi-exon	FALSE	canonical	3	62	junction_1	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTGCCTTGTGTGCTG	-85792470	True	NA	-2	True	AATAAA	-18	NA	85794925	85759322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_85761012_85768016_85769821_85794765
WTC11_00029467	chr15	-	3821	14	FSM	ENSG00000140538.16	ENST00000317501.7	3826	14	0	5	0	-2	multi-exon	FALSE	canonical	2	14	junction_5	4.23566150705729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGACTGAATCAGACC	-88255684	False	NA	NA	False	AATAAA	-16	NA	88256159	87977368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_87979464_87981225_87981361_88032856_88033046_88126270_88126374_88127161_88127227_88128710_88128735_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
WTC11_00029469	chr15	-	987	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	-1	0	0	multi-exon	FALSE	canonical	3	488	junction_2	28.6472802664872	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTCAGCTGATTTGC	-88462323	True	NA	-9	True	AATAAA	-16	NA	88467388	88459476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
WTC11_00029471	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-88462325	True	NA	NA	False	NA	NA	NA	88467390	88465012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88465774_88467149
WTC11_00029472	chr15	-	2318	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	-3	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.3150211575089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545926	True	NA	NA	False	AATAAA	-24	NA	88546653	88512479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
WTC11_00029473	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.9765453086705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545954	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
WTC11_00029474	chr15	-	213	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGCATAATTCTCATA	NA	False	NA	NA	False	NA	NA	NA	88550018	88549805	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_88549800_88550000
WTC11_00029475	chr15	-	1898	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	-6	0	6	multi-exon	FALSE	canonical	3	161	junction_4	21.016362672927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTCTGTGTCTCCAT	-88893867	True	NA	-3	True	AATAAA	-31	NA	88895544	88877287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
WTC11_00029476	chr15	-	2173	6	FSM	ENSG00000140511.12	ENST00000562889.5	1547	6	-89	-537	-89	0	multi-exon	FALSE	canonical	3	10	junction_5	87.9786337697966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-88895676	False	NA	-9	True	AATAAA	-25	NA	88895686	88877293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88892973_88893113_88895458
WTC11_00029479	chr15	-	1992	9	FSM	ENSG00000140545.15	ENST00000558018.5	1989	9	0	-3	0	3	multi-exon	FALSE	canonical	3	22	junction_8	418.905941113277	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGGTTCGTTATTGT	-88896557	True	NA	-2	True	AATATA	-23	NA	88913379	88898679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912123_88912177_88913246
WTC11_00029480	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	336.038894904874	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-88896559	True	NA	-35	True	NA	NA	NA	88913381	88898712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
WTC11_00029482	chr15	-	2464	1	FSM	ENSG00000140545.15	ENST00000617199.1	2464	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATAGTGACTGTGCCAT	-88904603	False	NA	NA	False	AATAAA	-20	NA	88904646	88902182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88902200_88904600
WTC11_00029489	chr15	-	3866	23	FSM	ENSG00000140521.17	ENST00000530292.3	3843	23	0	-23	0	0	multi-exon	FALSE	canonical	3	14	junction_3	77.6904883719434	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCTTTGTTAGTCAT	-89333341	False	NA	-2	True	AATAAA	-31	NA	89333355	89316304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317537_89317938_89318038_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095
WTC11_00029491	chr15	-	4477	23	FSM	ENSG00000140521.17	ENST00000268124.11	4462	23	0	-15	0	0	multi-exon	FALSE	canonical	3	69	junction_22	54.5502270639387	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCTTTGTTAGTCAT	-89330545	True	NA	-2	True	AATAAA	-31	NA	89334824	89316304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334672
WTC11_00029493	chr15	-	5318	22	FSM	ENSG00000140521.17	ENST00000672071.1	5318	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_21	55.6549541631515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGGCAGTGGAAATAAA	-89334697	False	NA	-52	True	GATAAA	-6	NA	89334711	89316354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334672
WTC11_00029502	chr15	-	1212	4	ISM	ENSG00000166813.16	ENST00000677187.1	2074	7	2980	136	-1772	-136	3prime_fragment	FALSE	canonical	3	95	junction_3	14.290634073484	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCGCCTTGTGTCTTGC	-89630537	False	NA	-3	True	NA	NA	NA	89630552	89628186	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_89628787_89628975_89629123_89629374_89629574_89630286
WTC11_00029504	chr15	-	978	3	FSM	ENSG00000166821.9	ENST00000561257.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTGAAAGGAAAAAAT	-89690421	True	NA	-30	True	AATGAA	-2	NA	89690662	89683079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89683856_89686430_89686547_89690576
WTC11_00029507	chr15	-	1368	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	-172	-458	-138	0	multi-exon	FALSE	canonical	3	22	junction_3	207.380018859634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	NA	False	NA	NA	False	NA	NA	NA	89894166	89834981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
WTC11_00029509	chr15	-	653	7	FSM	ENSG00000157823.17	ENST00000558999.5	653	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	223.85337463021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAGCAGCTGTGCTC	-89888405	True	NA	NA	False	AAAACA	-18	NA	89893994	89837614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89837723_89871474_89871547_89877305_89877425_89878264_89878301_89888520_89888633_89889048_89889141_89893880
WTC11_00029510	chr15	-	527	5	FSM	ENSG00000157823.17	ENST00000560184.5	601	5	0	74	0	-74	multi-exon	FALSE	canonical	1	1	junction_1	202.764641888077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGATTGTATCCATTTA	-89888381	True	NA	NA	False	NA	NA	NA	89893970	89865532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89865694_89871474_89871547_89888520_89888633_89889048_89889141_89893880
WTC11_00029511	chr15	-	573	6	FSM	ENSG00000157823.17	ENST00000560251.1	573	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	222.225651084658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCACTGGCAAAAGAAGT	-89888388	True	NA	NA	False	AAGAAA	-40	NA	89893977	89865612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89865694_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
WTC11_00029513	chr15	-	7578	6	FSM	ENSG00000242498.8	ENST00000357484.10	7587	6	0	9	0	-9	multi-exon	FALSE	canonical	3	15	junction_3	4.88262224629348	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGAAACGCTGAGTCTA	-89912168	True	NA	NA	False	CATAAA	-7	NA	89912952	89895014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89901804_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
WTC11_00029515	chr15	-	1449	9	FSM	ENSG00000182054.10	ENST00000560061.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	157.928336200316	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTCTTCACAAAATT	-90099104	True	NA	-21	True	NA	NA	NA	90102468	90083995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90102275
WTC11_00029516	chr15	-	891	8	NNC	ENSG00000185043.12	novel	1141	7	NA	NA	0	44048	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.094348196845	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCACCAAAAGAAACGGCC	-90228515	True	NA	NA	False	NA	NA	NA	90233941	90185926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_90185953_90230250_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
WTC11_00029517	chr15	-	1122	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	19	0	-19	multi-exon	FALSE	canonical	3	411	junction_2	44.0293462741991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTATTTTACTGCAT	-90228515	True	NA	-21	True	NA	NA	NA	90233941	90229993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
WTC11_00029521	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-90930592	True	NA	-18	True	ATTAAA	-16	NA	90932549	90929967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
WTC11_00029522	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.3202753190433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930589	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
WTC11_00029523	chr15	-	1024	3	FSM	ENSG00000184508.12	ENST00000559898.5	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	12	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGTGGTGGGAATCAGATG	-90930593	True	NA	NA	False	NA	NA	NA	90932550	90931098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90931945_90932054_90932111_90932428
WTC11_00029526	chr15	-	3075	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	-3	0	3	multi-exon	FALSE	canonical	3	36	junction_2	118.0140297782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTGGTGTTTCCTTTT	-90986059	True	NA	-1	True	AATAAA	-33	NA	90994535	90966036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00029527	chr15	-	2992	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	73.3007906994172	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986098	True	NA	-4	True	AATAAA	-30	NA	90994574	90966039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00029528	chr15	-	2336	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	79.3963914938741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	-90986028	True	NA	-41	True	AATATA	-13	NA	90994504	90966076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00029529	chr15	-	2450	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	91.3476356155121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986028	True	NA	-4	True	AATAAA	-30	NA	90994504	90966039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00029530	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	85.1934797627309	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-41	True	AATATA	-13	NA	90995629	90966076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00029540	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_17	14.6203328358627	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-91021153	True	NA	-1	True	AATAAA	-21	NA	91022594	90998672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
WTC11_00029545	chr15	-	11470	4	FSM	ENSG00000182175.15	ENST00000329082.12	11359	4	-123	12	-123	-12	multi-exon	FALSE	canonical	3	13	junction_3	35.5183833465933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGATCCAATTCCCTGC	NA	False	NA	NA	False	AATAAA	-42	NA	93089334	93035282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_93045706_93051992_93052508_93072915_93073032_93088918
WTC11_00029546	chr15	-	3048	3	FSM	ENSG00000182175.15	ENST00000542321.6	3038	3	0	-10	0	0	multi-exon	FALSE	canonical	3	81	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTTGGAGTTTGTTTT	-93068709	True	NA	-1	True	AGTAAA	-28	NA	93073148	93043405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_93045706_93051992_93052508_93072915
WTC11_00029548	chr15	-	4366	1	FSM	ENSG00000258611.2	ENST00000557561.2	1021	1	601	-3946	601	3946	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGGCTGTGAGT	-93061566	False	NA	NA	False	ATTAAA	-21	NA	93066005	93061639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_93061600_93066000
WTC11_00029550	chr15	-	1326	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	32	0	32	0	multi-exon	FALSE	canonical	3	6	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	-95046875	True	NA	NA	False	AAGAAA	-2	NA	95047056	95034107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_95034745_95035383_95035739_95046722
WTC11_00029552	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	-98647361	False	109	-12	True	AATAAA	-35	NA	98647371	98646950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_98647194_98647280
WTC11_00029554	chr15	-	3236	11	ISM	ENSG00000103852.13	ENST00000558663.5	2068	12	1334	-1147	-279	0	3prime_fragment	FALSE	canonical	1	2	junction_10	20.5058528230357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGCTACGGCTTTCTG	-99249741	False	NA	-22	True	AATAAA	-18	NA	99249889	99136405	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99249621
WTC11_00029562	chr15	-	2679	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	-7	0	3	multi-exon	FALSE	canonical	3	17	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTTATTTAATTTTT	-99731399	True	NA	7	True	AATAAA	-31	NA	99733339	99727397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99729732_99731717_99732008_99733284
WTC11_00029563	chr15	-	2717	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	46	-53	0	49	multi-exon	FALSE	canonical	3	47	junction_2	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGGAGTGCAGTGGT	-99731451	True	NA	53	True	NA	NA	NA	99733391	99727351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99729732_99731717_99732008_99733344
WTC11_00029567	chr15	-	907	1	FSM	ENSG00000270127.2	ENST00000602585.2	2389	1	1143	339	1143	-339	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCTCATGGGGGGTCG	NA	False	NA	NA	False	NA	NA	NA	100549010	100548103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_100548100_100549000
WTC11_00029570	chr15	-	957	2	NNC	ENSG00000140471.17	novel	2552	2	NA	NA	106	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACATTTTATTTTCCA	NA	False	NA	-7	True	AATAAA	-21	NA	100570525	100569235	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_100570118_100570450
WTC11_00029577	chr15	-	1222	1	FSM	ENSG00000259381.2	ENST00000561269.2	1222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGGGCATGAACTCGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	100646655	100645433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_100645400_100646700
WTC11_00029579	chr15	-	4662	3	FSM	ENSG00000131873.7	ENST00000254190.4	4662	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAAGTTTTTCAAGTT	-101252035	False	NA	-29	True	AGTAAA	-15	NA	101252048	101175726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101178981_101235081_101235578_101251136
WTC11_00029580	chr15	-	4216	3	FSM	ENSG00000131873.7	ENST00000543813.2	2173	3	-2043	0	-2043	0	multi-exon	FALSE	canonical	3	16	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTCCTATGGCAGAAAAC	NA	False	NA	NA	False	TTTAAA	-29	NA	101237190	101177100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101178981_101187992_101188220_101235081
WTC11_00029582	chr15	-	1219	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	-1	0	0	multi-exon	FALSE	canonical	3	836	junction_3	75.5232414558591	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTACTTATTTCTCTA	-101266772	True	NA	-7	True	ATTAAA	-22	NA	101277485	101272189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
WTC11_00029585	chr15	-	2445	4	FSM	ENSG00000131876.18	ENST00000560433.5	2440	4	0	-5	0	0	multi-exon	FALSE	canonical	3	2243	junction_2	230.058446680162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101269891	False	NA	-2	True	AATAAA	-22	NA	101288448	101281509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655
WTC11_00029586	chr15	-	928	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	-4	0	0	multi-exon	FALSE	canonical	3	125	junction_3	807.877617525055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101276647	True	NA	-2	True	AATAAA	-22	NA	101295204	101281509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
WTC11_00029587	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	216.970620130929	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101276691	True	NA	-2	True	AATAAA	-22	NA	101295248	101281509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
WTC11_00029588	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2243	junction_2	166.731737297439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276725	True	NA	-6	True	AATAAA	-18	NA	101295282	101281513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
WTC11_00029595	chr15	-	547	1	FSM	ENSG00000279970.1	ENST00000623561.1	1993	1	118	1328	118	-1328	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGATATCTTAGACTC	NA	False	NA	NA	False	NA	NA	NA	101301530	101300983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101301000_101301500
WTC11_00029597	chr15	-	744	6	FSM	ENSG00000140479.18	ENST00000558154.2	1155	6	0	411	0	-411	multi-exon	FALSE	canonical	3	8	junction_4	2.78567765543682	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCTCTTGGGAATC	NA	False	NA	NA	False	NA	NA	NA	101393306	101366195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101366333_101370334_101370524_101382091_101382210_101384321_101384426_101389463_101389565_101393211
WTC11_00029598	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	97.7113094784836	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101650912	True	NA	NA	False	NA	NA	NA	101652376	101632976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
WTC11_00029600	chr15	-	1423	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	-28	0	26	multi-exon	FALSE	canonical	3	40	junction_5	91.358633965269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCTTGAATAATCATTA	-101650917	True	NA	91	True	AATAAA	-45	NA	101652381	101641819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
WTC11_00029601	chr15	-	1330	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	2	-3	2	3	multi-exon	FALSE	canonical	3	195	junction_4	24.3002057604457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTGTTTTCTATATTA	-101652379	False	NA	68	True	AATAAA	-22	NA	101652389	101641842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
WTC11_00029606	chr15	-	3481	19	FSM	ENSG00000185418.16	ENST00000335968.8	3481	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	9.92269502419629	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTAGTATAAGGTG	-101721887	True	NA	NA	False	AATATA	-9	NA	101724473	101653595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101654731_101656921_101657037_101657784_101657858_101661711_101661817_101671485_101671587_101671670_101671749_101675599_101675738_101684074_101684238_101685895_101686063_101701085_101701185_101702238_101702386_101703858_101703938_101705682_101705748_101708792_101708911_101711879_101712002_101714839_101714964_101721125_101721323_101723092_101723165_101724090
WTC11_00029608	chr15	+	2101	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28290123	28292224	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_28290100_28292200
WTC11_00029609	chr15	+	492	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGTAAATAAAAC	NA	False	NA	NA	False	AATAAA	-29	NA	29731319	29731811	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_29731300_29731800
WTC11_00029610	chr15	+	265	1	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30445369	30445634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_30445400_30445600
WTC11_00029611	chr15	+	230	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGTAGTTCCAAATAGC	NA	False	NA	NA	False	AATACA	-5	NA	35239950	35240180	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_35240000_35240200
WTC11_00029612	chr15	+	315	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCACCAGGCCAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	35240743	35241058	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_35240700_35241100
WTC11_00029613	chr15	+	254	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTATATGCCCAGATGGC	NA	False	NA	NA	False	NA	NA	NA	35243197	35243451	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_35243200_35243500
WTC11_00029614	chr15	+	439	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGCATTCCGAGGACA	36286285	False	NA	NA	False	AATAAA	-37	NA	36286300	36286739	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36286300_36286700
WTC11_00029615	chr15	+	842	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGCCTTTGGAAAGAAG	36287895	False	NA	NA	False	NA	NA	NA	36287910	36288752	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36287900_36288800
WTC11_00029616	chr15	+	250	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTTCAGGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	37239448	37239698	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_37239400_37239700
WTC11_00029617	chr15	+	305	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGGCCAGGAGTGGCAT	40878008	False	NA	NA	False	NA	NA	NA	40878090	40878395	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_40878100_40878400
WTC11_00029618	chr15	+	402	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTAGATTGAATGG	NA	False	NA	NA	False	NA	NA	NA	42183191	42183593	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_42183200_42183600
WTC11_00029619	chr15	+	853	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGTGGGCATTTGATAAAA	NA	False	NA	NA	False	NA	NA	NA	42993554	42994407	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_42993600_42994400
WTC11_00029620	chr15	+	294	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGTTACATACATAGAC	NA	False	NA	NA	False	NA	NA	NA	50411237	50411531	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_50411200_50411500
WTC11_00029621	chr15	+	306	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTTATTCATTTGTA	NA	False	NA	NA	False	NA	NA	NA	50879870	50880176	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_50879900_50880200
WTC11_00029623	chr15	+	2273	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-42	NA	56663424	56665697	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_56663400_56665700
WTC11_00029624	chr15	+	543	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGGTTTCTGCAGAGAG	57269340	False	NA	NA	False	NA	NA	NA	57269358	57269901	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_57269400_57269900
WTC11_00029626	chr15	+	284	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACGTTTTTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	72059252	72059536	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_72059300_72059500
WTC11_00029629	chr15	+	899	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGTAGTCATGCTG	NA	False	NA	NA	False	NA	NA	NA	78755189	78756088	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_78755200_78756100
WTC11_00029630	chr15	+	325	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGATTGCACGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	84344422	84344747	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_84344400_84344700
WTC11_00029631	chr15	+	203	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACCGGTCAAGGACTG	NA	False	NA	NA	False	NA	NA	NA	87831657	87831860	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_87831700_87831900
WTC11_00029633	chr15	+	294	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGAAGGTAATGTGTA	88550312	False	NA	NA	False	NA	NA	NA	88550328	88550622	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_88550300_88550600
WTC11_00029636	chr15	+	305	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCGAGCGGAAGTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	93280683	93280988	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_93280700_93281000
WTC11_00029638	chr15	+	6300	37	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-684	-2	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	140.792079756719	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAATTACACCCATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	22494885	22590813	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523041_22523202_22523346_22523479_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
WTC11_00029646	chr15	+	4085	7	FSM	ENSG00000140157.16	ENST00000674289.1	4082	7	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.401601711583	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827154	True	NA	NA	False	NA	NA	NA	22838675	22869362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838948_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00029648	chr15	+	849	8	FSM	ENSG00000128739.23	ENST00000553597.5	849	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3478.8562159751	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGTGGAACAGCAATCA	24856206	True	NA	NA	False	NA	NA	NA	24856600	24974434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24920472_24920548_24921156_24921256_24962113_24962210_24967931_24968083_24974310
WTC11_00029654	chr15	+	22435	8	ISM	ENSG00000224078.15	ENST00000551631.7	17832	11	16465	-3146	-4283	-2792	3prime_fragment	FALSE	canonical	3	108	junction_4	299.767528976324	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	24996004	False	NA	NA	False	NA	NA	NA	24996021	25039636	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
WTC11_00029662	chr15	+	7760	40	NIC	ENSG00000224078.15	novel	11322	42	NA	NA	-1	0	intron_retention	FALSE	canonical	3	44	junction_20	539.427958141756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25041961	False	NA	27	True	CATAAA	-20	NA	25041972	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086509_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029663	chr15	+	11406	40	NNC	ENSG00000224078.15	novel	9815	40	NA	NA	-3862	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_8	549.301925051442	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25046647	False	NA	9	True	CATAAA	-2	NA	25046663	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029664	chr15	+	7383	40	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	170	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_14	528.368895448855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25050790	False	NA	27	True	CATAAA	-20	NA	25050801	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029665	chr15	+	6905	41	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_20	548.217292116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	25050922	False	NA	12	True	AATAAA	-2	NA	25050933	25119875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086509_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029666	chr15	+	5276	33	NIC	ENSG00000224078.15	novel	7504	40	NA	NA	-130	-98	combination_of_known_splicesites	FALSE	canonical	3	132	junction_15	508.376014260114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACTCATAGATATTTA	25059521	True	NA	-86	True	ATTAAA	-13	NA	25059537	25119777	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00029667	chr15	+	5694	35	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	572.011022500084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACTGGGATTAAGTAT	25059521	True	NA	24	True	AATAAA	-14	NA	25059537	25119887	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029669	chr15	+	5654	32	NIC	ENSG00000224078.15	novel	8814	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	616.324947740294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	25064979	True	NA	27	True	AATAAA	-17	NA	25065025	25119890	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25065455_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25077033_25077317_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029670	chr15	+	7826	31	NNC	ENSG00000224078.15	novel	8415	34	NA	NA	286	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	567.659224848461	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAAACCCTTCACCTAT	25070338	False	NA	1	True	NA	NA	NA	25070432	25120400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086334_25086465_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029671	chr15	+	5028	27	NIC	ENSG00000224078.15	novel	8250	35	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	275	junction_12	464.964241164985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25075655	True	NA	27	True	CATAAA	-20	NA	25075779	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029672	chr15	+	5929	26	NIC	ENSG00000224078.15	novel	8814	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	547.8997076108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25079034	False	NA	27	True	CATAAA	-20	NA	25079057	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029673	chr15	+	4151	25	NIC	ENSG00000224078.15	novel	6860	25	NA	NA	-10	110	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	588.387189166284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCTTTCCTACAGCC	25081057	True	NA	-59	True	AATGAA	-6	NA	25081166	25120000	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029675	chr15	+	6084	20	NIC	ENSG00000224078.15	novel	7640	22	NA	NA	1147	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	533.433585914608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25087619	False	NA	27	True	CATAAA	-20	NA	25087673	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25089867_25091589_25091720_25093833_25093975_25095718_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029676	chr15	+	5651	20	NIC	ENSG00000224078.15	novel	7238	20	NA	NA	1149	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_8	487.804567833156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	25087621	False	NA	27	True	AATAAA	-17	NA	25087675	25119890	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029677	chr15	+	4871	21	Fusion	ENSG00000261069.3_ENSG00000224078.15	novel	6463	21	NA	NA	19	0	multi-exon	FALSE	canonical	3	18	junction_17	595.500400923459	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	25087625	False	NA	12	True	AATAAA	-2	NA	25087679	25119875	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25088742_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115265_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029678	chr15	+	3340	16	Fusion	ENSG00000261069.3_ENSG00000224078.15	novel	6701	19	NA	NA	23	-1	multi-exon	FALSE	canonical	3	63	junction_1	536.187885809526	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATTAATAACCTGGTG	25087629	False	NA	NA	False	ATTAAA	-45	NA	25087683	25111997	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25088742_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764
WTC11_00029679	chr15	+	5028	20	ISM	ENSG00000224078.15	ENST00000661889.1	7640	22	3419	2059	-260	0	3prime_fragment	FALSE	canonical	3	401	junction_8	450.752537891372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	25088791	False	NA	9	True	CATAAA	-2	NA	25088803	25120408	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029680	chr15	+	5145	21	Fusion	ENSG00000277785.1_ENSG00000224078.15	novel	6659	20	NA	NA	14	0	multi-exon	FALSE	canonical	3	83	junction_4	606.301443178226	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25088805	False	NA	27	True	CATAAA	-20	NA	25088817	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
WTC11_00029681	chr15	+	4427	19	ISM	ENSG00000224078.15	ENST00000660542.1	7338	29	13440	2041	79	0	3prime_fragment	FALSE	canonical	3	275	junction_4	404.527330487213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25089200	False	NA	27	True	CATAAA	-20	NA	25089210	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00029682	chr15	+	2414	1	FSM	ENSG00000279050.1	ENST00000624188.1	2414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAAGAAAAAAATACTGG	25135628	False	NA	NA	False	NA	NA	NA	25135641	25138055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25135600_25138100
WTC11_00029688	chr15	+	2550	10	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	7	-7	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	68.8847669017694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGACATATAGGATTC	26865091	True	NA	10	True	AATAAA	-13	NA	26867169	26949200	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_26867385_26868728_26868794_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
WTC11_00029691	chr15	+	1065	7	ISM	ENSG00000206149.11	ENST00000689985.1	1723	13	39790	2959	-3848	2894	internal_fragment	FALSE	canonical	3	77	junction_3	42.4290257043716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGATAGATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	28629274	28637338	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28629442_28632636_28632808_28633191_28633296_28633589_28633741_28636486_28636702_28636974_28637108_28637214
WTC11_00029696	chr15	+	288	1	FSM	ENSG00000256951.1	ENST00000431496.1	288	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCGACTGCCGTTCCCC	NA	False	NA	NA	False	NA	NA	NA	28789198	28789486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28789200_28789500
WTC11_00029697	chr15	+	457	3	ISM	ENSG00000261377.6	ENST00000566321.5	1069	7	6902	2189	6902	-2189	internal_fragment	FALSE	canonical	3	103	junction_2	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTTTTGAAGAATTTA	NA	False	NA	NA	False	AATGAA	-30	NA	28808267	28816810	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28808418_28815346_28815596_28816752
WTC11_00029699	chr15	+	3256	11	FSM	ENSG00000285077.3	ENST00000428041.4	3256	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	50.3079516577648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGAATATCTGATC	NA	False	NA	12	True	AATAAA	-25	NA	30625965	30649529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30648303
WTC11_00029702	chr15	+	405	2	FSM	ENSG00000285077.3	ENST00000568574.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	30634311	True	NA	NA	False	NA	NA	NA	30634324	30635385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30634424_30635079
WTC11_00029705	chr15	+	2687	4	FSM	ENSG00000198690.10	ENST00000561607.6	2687	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	73.6040457825217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATAGAATCCTCATCT	30899980	True	NA	16	True	AATAAA	-28	NA	30903891	30911640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613
WTC11_00029708	chr15	+	1822	2	FSM	ENSG00000259448.3	ENST00000654993.1	2073	2	32	219	32	6	multi-exon	FALSE	canonical	2	24	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTGCATTATTATCC	NA	False	NA	NA	False	NA	NA	NA	31215653	31220726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_31216038_31219288
WTC11_00029712	chr15	+	800	1	FSM	ENSG00000259516.2	ENST00000559548.2	737	1	4	-67	4	67	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAATCCTGCCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	35237329	35238129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35237300_35238100
WTC11_00029713	chr15	+	2859	10	FSM	ENSG00000186073.14	ENST00000642817.1	2506	10	-59	-294	-33	0	multi-exon	FALSE	canonical	3	10	junction_1	31.1626557133873	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36579568	False	NA	NA	False	AATAAA	-16	NA	36579592	36810244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
WTC11_00029714	chr15	+	1855	6	FSM	ENSG00000186073.14	ENST00000565792.5	1855	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.2928250388514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTTTTGTATTTATTC	NA	False	NA	NA	False	AATAAA	-20	NA	36696406	36810248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36696511_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
WTC11_00029716	chr15	+	8290	8	NNC	ENSG00000166068.13	novel	7270	7	NA	NA	-928	1257	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	82.1042145131194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTTTCATTTCTATCA	NA	False	NA	16	True	AATAAA	-25	NA	38251907	38358506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013_38357021_38358185
WTC11_00029717	chr15	+	4056	8	FSM	ENSG00000171262.11	ENST00000397609.6	4388	8	1	331	1	-331	multi-exon	FALSE	canonical	0	0	junction_7	4.86973158544552	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGGAGCACAGGTTAG	38445289	True	NA	NA	False	NA	NA	NA	38454127	38487379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291_38481460_38484254
WTC11_00029721	chr15	+	1071	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	-13	0	4	0	multi-exon	FALSE	canonical	2	8	junction_2	10.6249183003395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038775	True	NA	NA	False	ATTAAA	-19	NA	40039277	40065705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
WTC11_00029725	chr15	+	3812	11	NIC	ENSG00000137843.12	novel	2540	10	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_2	21.0608641798004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTCCTGTGTCTCTG	40251834	True	NA	10	True	ATTAAA	-18	NA	40252556	40277487	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40252692_40253177_40253290_40263798_40263920_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
WTC11_00029727	chr15	+	684	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	-19	0	-17	0	multi-exon	FALSE	canonical	2	12	junction_2	228.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	40375987	True	NA	2	True	AATACA	-15	NA	40382921	40384922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40384456
WTC11_00029728	chr15	+	1397	9	FSM	ENSG00000128944.14	ENST00000560981.5	1598	9	201	0	-17	0	multi-exon	FALSE	canonical	3	21	junction_2	155.097096604031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	40375987	True	NA	37	True	AATAAA	-44	NA	40382921	40394172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40386404_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
WTC11_00029730	chr15	+	4819	7	NIC	ENSG00000140320.12	novel	4779	7	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	33.0391182287502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	40439150	True	NA	19	True	AATAAA	-23	NA	40440901	40468228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40441269_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
WTC11_00029731	chr15	+	4766	7	NIC	ENSG00000140320.12	novel	4779	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	24.3629956194955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	40439197	True	NA	19	True	AATAAA	-23	NA	40440948	40468228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
WTC11_00029732	chr15	+	3994	6	NIC	ENSG00000140320.12	novel	4432	6	NA	NA	435	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	32.6717002924549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	40458820	False	NA	19	True	AATAAA	-23	NA	40458899	40468228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
WTC11_00029738	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	336.11539023906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	41259328	True	NA	16	True	AATAAA	-18	NA	41284030	41289155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
WTC11_00029741	chr15	+	2246	11	NNC	ENSG00000137804.14	novel	2274	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_4	562.641128962325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	41318901	True	NA	17	True	AATAAA	-18	NA	41332912	41381046	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351148_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
WTC11_00029742	chr15	+	7324	26	NIC	ENSG00000168970.22	novel	7218	25	NA	NA	8	-5	intron_retention	FALSE	canonical	3	30	junction_17	33.7729832854606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTGAGGCGCTGAGA	41825893	True	NA	14	True	NA	NA	NA	41828124	41848138	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843125_41843224_41843675_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
WTC11_00029743	chr15	+	5898	20	Fusion	ENSG00000243789.11_ENSG00000243708.11	novel	2696	20	NA	NA	-800	0	intron_retention	FALSE	canonical	3	30	junction_10	21.1879859336001	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGCGCTGAGACC	41836963	False	NA	16	True	NA	NA	NA	41836974	41848140	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843125_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
WTC11_00029745	chr15	+	4747	25	NIC	ENSG00000214013.10	novel	5553	24	NA	NA	156	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_15	11.7862178223362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTGATTTGCTTTT	42273413	False	NA	16	True	ATTAAA	-19	NA	42273450	42353666	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362_42327443_42329305_42329450_42330575_42330673_42338388_42338491_42339668_42339913_42340689_42340755_42343077_42343155_42345757_42345833_42348102_42348217_42349382_42349496_42351328_42351433_42352029
WTC11_00029746	chr15	+	7751	24	FSM	ENSG00000214013.10	ENST00000318010.13	5553	24	1041	-3239	0	3239	multi-exon	FALSE	canonical	2	11	junction_14	12.0352349751624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAATAAACCTTGAGTT	42274227	False	NA	-22	True	NA	NA	NA	42274241	42356905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362_42327443_42329305_42329450_42330575_42330673_42338388_42338491_42339668_42339913_42340689_42340755_42343077_42343155_42345757_42345833_42348102_42348217_42349382_42349496_42351328_42351433_42352029
WTC11_00029750	chr15	+	780	5	ISM	ENSG00000137814.12	ENST00000564279.5	626	7	1	4940	1	3	5prime_fragment	FALSE	canonical	3	22	junction_3	48.1890807133732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGTAAAGTACAT	42544366	True	NA	8	True	AATAAA	-23	NA	42548858	42561690	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269
WTC11_00029751	chr15	+	488	4	FSM	ENSG00000159433.12	ENST00000562139.1	656	4	168	0	168	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTCAGACAGATCCTGA	NA	False	NA	NA	False	NA	NA	NA	42675663	42682213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42675747_42675871_42675976_42681421_42681613_42682103
WTC11_00029754	chr15	+	1406	9	NIC	ENSG00000168803.16	novel	1559	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	19.9558105573289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329434	True	NA	3	True	ATTAAA	-16	NA	43330653	43349412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_43330860_43333310_43333435_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
WTC11_00029758	chr15	+	1042	3	FSM	ENSG00000140264.21	ENST00000409960.6	1032	3	-10	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	4554	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTTCACTTTCTCTTCTG	43712876	True	NA	NA	False	NA	NA	NA	43792319	43794444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793575
WTC11_00029762	chr15	+	533	3	FSM	ENSG00000104131.13	ENST00000536248.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	47.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGTAAATCAGCTTTTC	44554610	True	NA	NA	False	NA	NA	NA	44554623	44560575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44554668_44557488_44557651_44560248
WTC11_00029763	chr15	+	1476	1	FSM	ENSG00000166710.22	ENST00000632133.1	2403	1	-1290	2217	0	-2217	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGGCAACAGAGCGAGAC	44693943	True	NA	NA	False	NA	NA	NA	44711486	44712962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44711500_44713000
WTC11_00029765	chr15	+	2329	1	FSM	ENSG00000166710.22	ENST00000623550.1	2329	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	44715785	False	NA	33	True	AATAAA	-14	NA	44715816	44718145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44715800_44718100
WTC11_00029768	chr15	+	536	3	FSM	ENSG00000137857.18	ENST00000558446.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCAGCCCTTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	45150299	45151881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45150702_45151122_45151249_45151873
WTC11_00029776	chr15	+	1834	10	FSM	ENSG00000156958.15	ENST00000396509.6	1834	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.6698110409314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	49169813	True	NA	7	True	ATTAAA	-22	NA	49170203	49328514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49170359_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
WTC11_00029780	chr15	+	2664	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	0	1479	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	179.446259364747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGCTGATATATCTTAA	49617379	True	NA	28	True	AATAAA	-15	NA	49621044	49645136	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
WTC11_00029783	chr15	+	5685	21	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	4	1388	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	77.4897412565044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTAATGTTTATCAGT	50418272	True	NA	15	True	AATAAA	-22	NA	50424408	50501083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00029784	chr15	+	2273	2	FSM	ENSG00000259577.2	ENST00000560518.1	1972	2	-218	-83	0	-6	multi-exon	FALSE	canonical	2	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAATTCCTAAAAGTAAT	52179970	False	NA	NA	False	NA	NA	NA	52179998	52205957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52181203_52204888
WTC11_00029786	chr15	+	1938	12	NNC	ENSG00000069943.10	novel	1910	12	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	2	36	junction_2	6.28654604349835	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCATGGTGTAGTTTTA	55319176	False	NA	7	True	AATAAA	-12	NA	55319186	55355641	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_55319414_55320274_55320409_55321270_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
WTC11_00029804	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	537.249327134221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	63007007	True	NA	8	True	AATAAA	-24	NA	63042746	63066178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
WTC11_00029806	chr15	+	1984	8	FSM	ENSG00000140416.23	ENST00000558910.3	1968	8	-16	0	0	0	multi-exon	FALSE	canonical	3	365	junction_7	576.204328837808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATGTTTCAGAGTTC	63045018	True	NA	10	True	ATTAAA	-26	NA	63048470	63065278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063
WTC11_00029807	chr15	+	978	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	-39	2	0	0	multi-exon	FALSE	canonical	3	301	junction_8	576.205692439774	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	63045084	False	NA	18	True	AATAAA	-13	NA	63048536	63066091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
WTC11_00029810	chr15	+	5496	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	3	0	-3	multi-exon	FALSE	canonical	3	14	junction_2	47.9054624581929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTATTTCTGAACACCT	63504713	False	NA	16	True	ATTAAA	-20	NA	63504733	63594637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
WTC11_00029826	chr15	+	4515	1	NIC	ENSG00000138604.10	novel	5044	5	NA	NA	6982	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCTTAAAAAGAATATAC	NA	False	NA	NA	False	AATAAA	-5	NA	69267677	69272192	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69267700_69272200
WTC11_00029840	chr15	+	3010	8	FSM	ENSG00000140464.20	ENST00000436891.7	3010	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	48.0917490483618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992612	True	NA	26	True	AATAAA	-18	NA	73994743	74036394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74035171
WTC11_00029849	chr15	+	1882	8	NIC	ENSG00000178802.18	novel	5793	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	61.2815516401843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74885752	True	NA	15	True	ATTAAA	-17	NA	74890073	74898228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
WTC11_00029850	chr15	+	2777	1	FSM	ENSG00000178802.18	ENST00000566556.1	2795	1	18	0	18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74895430	False	NA	15	True	ATTAAA	-17	NA	74895451	74898228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74895500_74898200
WTC11_00029853	chr15	+	795	6	ISM	ENSG00000140365.16	ENST00000564815.5	639	7	2013	-200	4	0	3prime_fragment	FALSE	canonical	3	70	junction_1	300.121042247957	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75338020	True	NA	15	True	AATAAA	-17	NA	75338065	75340273	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
WTC11_00029894	chr15	+	5770	4	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	11.4406682011537	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTTTCTTATCTGAAA	NA	False	NA	NA	False	AATACA	-21	NA	84468672	84474714	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_84468778_84468872_84468965_84469047_84469139_84469232
WTC11_00029895	chr15	+	1004	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTCACAGGAGTCCC	84596844	True	NA	8	True	AATAAA	-18	NA	84601052	84606882	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_84601189_84603819_84604334_84606528
WTC11_00029900	chr15	+	8864	11	NIC	ENSG00000136383.7	novel	10238	14	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	14.4253249530123	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATCTTGGTCATACAGC	84817299	False	NA	NA	False	AATAAA	-18	NA	84817341	84873479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_84817596_84827483_84827606_84856391_84858556_84859242_84859391_84859775_84859904_84860036_84860073_84862634_84862916_84863551_84863641_84864441_84864666_84867316_84867366_84868110
WTC11_00029913	chr15	+	4155	39	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	-3	10	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	116.961934760098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCTTCATTTTTACCC	89236535	True	NA	32	True	AATAAA	-32	NA	89244000	89316491	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244034_89245755_89245840_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
WTC11_00029927	chr15	+	5657	24	NIC	ENSG00000196547.15	novel	5124	23	NA	NA	19	0	intron_retention	TRUE	canonical	0	0	junction_2	18.9374654915555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAATCAACTGAAGAC	90902191	True	NA	6	True	AATAAA	-18	NA	90902395	90921191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90902976_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
WTC11_00029928	chr15	+	5064	23	NIC	ENSG00000196547.15	novel	5124	23	NA	NA	92	0	intron_retention	FALSE	canonical	3	12	junction_1	15.5998516627828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAATCAACTGAAGAC	90902734	False	NA	6	True	AATAAA	-18	NA	90902786	90921191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90902976_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
WTC11_00029929	chr15	+	6268	22	FSM	ENSG00000196547.15	ENST00000360468.7	6268	22	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	12.2051622846465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTGCAATGAAATTATT	90904178	False	NA	8	True	AATAAA	-23	NA	90904189	90922584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
WTC11_00029932	chr15	+	1989	9	NIC	ENSG00000166965.13	novel	2675	8	NA	NA	-28	0	intron_retention	FALSE	canonical	3	36	junction_1	33.6988037621516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTCAAGTGATACAGC	90954833	False	NA	-3	True	NA	NA	NA	90954852	90962324	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90954949_90955799_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
WTC11_00029934	chr15	+	2865	7	NIC	ENSG00000166965.13	novel	1556	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	77	junction_1	20.6458228220626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACCTCAAGTGATAC	90955041	False	NA	-6	True	NA	NA	NA	90955387	90962321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024
WTC11_00029935	chr15	+	2375	5	ISM	ENSG00000166965.13	ENST00000557266.5	2110	7	1457	0	99	0	intron_retention	FALSE	canonical	3	118	junction_1	8.44097150806707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGATGGTCATTTT	90956459	False	NA	15	True	NA	NA	NA	90956838	90962342	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024
WTC11_00029958	chr15	+	1698	11	NNC	ENSG00000185596.16	novel	1644	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	46	junction_4	67.3219132229618	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAACTGAGCAGAAA	101953192	True	NA	NA	False	NA	NA	NA	101961602	101976543	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_101961642_101966069_101966224_101972595_101972695_101972900_101973048_101973219_101973353_101973591_101973728_101973904_101974103_101974194_101974354_101975012_101975166_101975923_101975993_101976132
WTC11_00029974	chr15	-	15243	92	NNC	ENSG00000128731.18	novel	15364	93	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_69	53.244038781265	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGAGCTTTCTTAACCA	NA	False	NA	NA	False	AATAAA	-20	NA	28322178	28111035	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238758_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
WTC11_00029978	chr15	-	3411	10	FSM	ENSG00000166664.15	ENST00000299847.7	3411	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.4210201428873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCACTCATTTCTGG	-30393527	False	NA	NA	False	AATAAA	-22	NA	30393540	30360565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30383318_30383383_30386862_30386988_30393251
WTC11_00029979	chr15	-	624	2	Antisense	novelGene_ENSG00000259845.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTGGTCGTTAAGCCC	NA	False	NA	NA	False	NA	NA	NA	30815730	30812565	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_-_30813141_30815681
WTC11_00029980	chr15	-	536	1	FSM	ENSG00000260382.1	ENST00000561684.1	965	1	250	179	250	-179	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATGCGAGCACGGACAC	NA	False	NA	NA	False	NA	NA	NA	30882981	30882445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30882400_30883000
WTC11_00029981	chr15	-	5442	14	NIC	ENSG00000169918.10	novel	3501	14	NA	NA	31	1839	intron_retention	FALSE	canonical	2	9	junction_5	7.37499373181962	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCAGATATTTTCTTT	-31870475	True	NA	NA	False	AAAACA	-31	NA	31870758	31481127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_31484725_31487193_31487279_31487451_31487567_31501689_31501840_31503690_31503819_31526348_31526462_31527180_31527309_31530706_31530809_31558968_31559188_31570017_31570198_31655095_31655251_31656982_31657078_31689358_31689482_31870506
WTC11_00029987	chr15	-	1362	1	FSM	ENSG00000134152.11	ENST00000560915.1	1553	1	-8	199	0	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTAAGGTTTGTGCCT	-34207096	True	NA	NA	False	NA	NA	NA	34210077	34208715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34208700_34210100
WTC11_00029990	chr15	-	1570	1	FSM	ENSG00000259917.1	ENST00000568980.1	1570	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGGTGCCTAGGAAGA	-34490445	False	NA	NA	False	NA	NA	NA	34490571	34489001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34489000_34490600
WTC11_00029991	chr15	-	3966	12	ISM	ENSG00000215252.12	ENST00000438958.2	4252	15	1467	-30	1183	30	3prime_fragment	FALSE	canonical	3	77	junction_5	22.9191896933192	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATCTTGAAAATTATAGT	NA	False	NA	14	True	ATTAAA	-41	NA	34531793	34525251	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647
WTC11_00029992	chr15	-	2637	10	NIC	ENSG00000215252.12	novel	5607	24	NA	NA	-3	-5887	intron_retention	FALSE	canonical	3	30	junction_4	24.7451204817095	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTCCAGTGGGGTCC	-34582541	True	NA	NA	False	CATAAA	-35	NA	34583654	34532845	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
WTC11_00029993	chr15	-	5974	4	NNC	ENSG00000198146.4	novel	5439	3	NA	NA	-505	47522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	725.802085052576	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGGCGTATAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	34988792	34930818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34930849_34978340_34983491_34987556_34987674_34988115
WTC11_00029994	chr15	-	529	3	FSM	ENSG00000289289.1	ENST00000692204.1	530	3	1	0	1	0	multi-exon	FALSE	canonical	3	17	junction_2	3	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTGCTGGCTGGGTGCG	-35061882	True	NA	NA	False	AATAAA	-34	NA	35062160	35056534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35056941_35061939_35062000_35062097
WTC11_00029999	chr15	-	4692	5	FSM	ENSG00000104081.14	ENST00000354670.9	4692	5	1	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_4	10.8714074525794	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTTTTATTTTTCAAG	-40107851	True	NA	1	True	AATAAA	-17	NA	40108878	40087888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108387_40108772
WTC11_00030000	chr15	-	2276	4	FSM	ENSG00000104081.14	ENST00000558774.5	671	4	24	-1629	10	1571	multi-exon	FALSE	canonical	2	5	junction_3	11.2249721603218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGAAGAAGGGGTGCC	-40107841	True	NA	NA	False	GGGGCT	-6	NA	40108868	40090104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40105794_40106092_40108258_40108358_40108772
WTC11_00030004	chr15	-	1260	4	ISM	ENSG00000137841.12	ENST00000559381.5	1641	6	657	-8	0	8	3prime_fragment	FALSE	canonical	3	75	junction_1	4.98887651569859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGGTCTCTATTCTA	-40290661	False	NA	-1	True	ATTAAA	-26	NA	40290672	40287899	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576
WTC11_00030005	chr15	-	4652	29	FSM	ENSG00000137841.12	ENST00000558588.5	4643	29	0	-9	0	8	multi-exon	FALSE	canonical	2	2	junction_2	18.2852957541388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGGTCTCTATTCTA	-40307568	False	NA	-1	True	ATTAAA	-26	NA	40307693	40287899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288919_40289271_40289359_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
WTC11_00030006	chr15	-	4636	32	FSM	ENSG00000137841.12	ENST00000260402.8	4627	32	0	-9	0	8	multi-exon	FALSE	canonical	2	12	junction_8	21.9322103819303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGGTCTCTATTCTA	-40307810	True	NA	-1	True	ATTAAA	-26	NA	40307935	40287899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291605_40291651_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
WTC11_00030007	chr15	-	4638	31	FSM	ENSG00000137841.12	ENST00000456256.6	4242	31	-157	-239	-47	8	multi-exon	FALSE	canonical	2	14	junction_7	22.0921303233125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGGTCTCTATTCTA	NA	False	NA	-1	True	ATTAAA	-26	NA	40307982	40287899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
WTC11_00030010	chr15	-	343	3	FSM	ENSG00000128891.16	ENST00000560109.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTCAGTACCCTGT	-40563755	True	NA	NA	False	TTTAAA	-13	NA	40565035	40561980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40562008_40562771_40563028_40564975
WTC11_00030024	chr15	-	2903	21	NNC	ENSG00000103978.16	novel	2964	20	NA	NA	0	20652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.6027442809414	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTTTTGGAAGTGAAAG	-42269548	True	NA	NA	False	NA	NA	NA	42273432	42189794	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_42189821_42210532_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228817_42231187_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
WTC11_00030025	chr15	-	7720	20	NIC	ENSG00000103994.18	novel	5677	20	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	42.0745940936338	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCGTTACCTTGTCTGC	-42482811	True	NA	0	True	AATAAA	-24	NA	42491105	42412816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439553_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
WTC11_00030030	chr15	-	11207	15	FSM	ENSG00000128881.18	ENST00000267890.11	11208	15	0	1	0	-1	multi-exon	FALSE	canonical	1	4	junction_1	10.6178997884877	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTAGTCCATTATTCT	-42919055	True	NA	NA	False	AATAAA	-19	NA	42920778	42738730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42746258_42751973_42753248_42775134_42775724_42777030_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
WTC11_00030034	chr15	-	1783	11	NNC	ENSG00000067369.14	novel	10369	28	NA	NA	0	24846	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	55.684468211522	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGTTAAGAGTAGGTG	-43485854	True	NA	NA	False	ATTAAA	-15	NA	43493105	43472591	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_43473133_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
WTC11_00030042	chr15	-	599	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	-163	-40	-163	40	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGGCCCAGGACACC	NA	False	NA	NA	False	AATAAA	-40	NA	43876407	43875808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43875800_43876400
WTC11_00030045	chr15	-	7621	40	FSM	ENSG00000104133.16	ENST00000682065.1	7624	40	23	-20	3	0	multi-exon	FALSE	canonical	2	5	junction_11	18.960597920537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661251	True	NA	-1	True	AATAAA	-17	NA	44663655	44562695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584415_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00030046	chr15	-	3985	23	FSM	ENSG00000104133.16	ENST00000682915.1	3985	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.621596441782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCACCTTTTATCTGG	-44661243	True	NA	NA	False	AATGAA	-35	NA	44663647	44598630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44598837_44600466_44600633_44604104_44604198_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00030049	chr15	-	512	4	ISM	ENSG00000259479.6	ENST00000558556.5	1069	9	29493	-22	-1920	22	3prime_fragment	FALSE	canonical	3	40	junction_3	106.728107304912	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCCAGTCTCGGGATC	NA	False	NA	NA	False	NA	NA	NA	44832357	44827037	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_44827222_44828449_44828572_44831528_44831704_44832326
WTC11_00030051	chr15	-	577	4	FSM	ENSG00000138606.20	ENST00000561091.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	70.0015872835911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCCTCAAGTCTGAGT	-45185845	False	NA	-29	True	AATAAA	-3	NA	45187459	45174222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45174445_45175218_45175426_45178164_45178307_45187453
WTC11_00030052	chr15	-	792	1	FSM	ENSG00000213862.4	ENST00000497325.1	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTACACTGTTGAGTT	NA	False	NA	NA	False	ACTAAA	-7	NA	47730935	47730143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_47730100_47730900
WTC11_00030060	chr15	-	7059	18	FSM	ENSG00000138593.9	ENST00000559471.6	7059	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	3.06898763782249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	-49043607	True	NA	NA	False	AATAAA	-19	NA	49046446	48988637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
WTC11_00030064	chr15	-	695	3	FSM	ENSG00000166200.15	ENST00000559016.1	570	3	-302	177	-302	-177	multi-exon	FALSE	canonical	3	352	junction_2	24.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATGGGGAGATATCAAA	-49137739	False	NA	NA	False	NA	NA	NA	49137761	49134311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49134515_49137149_49137228_49137347
WTC11_00030066	chr15	-	7047	1	FSM	ENSG00000285410.1	ENST00000615671.2	5926	1	-1072	-49	-1072	49	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGATTTAAAAAAAATTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	50355933	50348886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50348900_50355900
WTC11_00030067	chr15	-	10598	44	FSM	ENSG00000104093.14	ENST00000560891.6	10596	44	1	-3	0	0	multi-exon	TRUE	canonical	2	4	junction_23	6.53732471169627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTGATACTGTTTTT	-51622163	True	NA	-9	True	AATAAA	-18	NA	51622770	51447787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51459597_51459661_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476720_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
WTC11_00030069	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175395	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52149926_52153939_52154077_52179767
WTC11_00030075	chr15	-	5020	13	NIC	ENSG00000047346.13	novel	4726	13	NA	NA	83	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_12	7.74013709324468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGAAACGTGTACTTGG	-52678887	False	NA	NA	False	AATATA	-11	NA	52679289	52581325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678429
WTC11_00030085	chr15	-	7770	9	ISM	ENSG00000181827.16	ENST00000559447.8	10885	10	15	3257	15	-3256	intron_retention	FALSE	canonical	0	0	junction_4	18.9435840062011	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGGATCTGAAGGTGT	-56243854	False	NA	-13	True	ATTAAA	-17	NA	56243864	56090536	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_56096621_56098080_56098377_56101358_56101567_56102168_56102254_56103553_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124
WTC11_00030086	chr15	-	7785	9	NNC	ENSG00000181827.16	novel	10885	10	NA	NA	0	-3256	intron_retention	FALSE	non_canonical	3	45	junction_8	5.30182751511212	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGGATCTGAAGGTGT	-56243471	True	NA	-13	True	ATTAAA	-17	NA	56243879	56090536	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_56096621_56098080_56098377_56101358_56101567_56102168_56102250_56103549_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124
WTC11_00030102	chr15	-	1583	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	-660	0	660	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACCCGCAGAAGTCCT	-63157271	False	NA	NA	False	NA	NA	NA	63157281	63153192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
WTC11_00030103	chr15	-	970	3	FSM	ENSG00000185088.14	ENST00000439025.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTTTACAAAATTTT	-63125932	True	NA	NA	False	TTTAAA	-18	NA	63157499	63154970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63155732_63156412_63156522_63157399
WTC11_00030105	chr15	-	3369	4	FSM	ENSG00000166797.11	ENST00000559950.1	561	4	19	-2827	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	80.4169689113491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	-64081493	True	NA	-41	True	AATAAA	-5	NA	64093838	64072577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64075538_64081101_64081152_64088686_64088852_64093644
WTC11_00030117	chr15	-	2890	4	FSM	ENSG00000103710.11	ENST00000421977.7	1523	4	-478	-889	-430	-2	multi-exon	FALSE	canonical	3	11	junction_3	32.3144274623924	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTAGTTTGCTTGCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	65068421	65053338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65067732
WTC11_00030119	chr15	-	2354	4	FSM	ENSG00000138617.16	ENST00000444347.2	2352	4	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.589970855344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTGTGAGTGCTTT	-65286641	True	NA	-6	True	AATAAA	-26	NA	65286843	65258093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65259543_65260884_65261027_65263148_65263321_65286252
WTC11_00030120	chr15	-	2731	6	FSM	ENSG00000138617.16	ENST00000261888.10	2731	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.181470884935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTGTGAGTGCTTT	-65286670	True	NA	-6	True	AATAAA	-26	NA	65286872	65258093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65259546_65260884_65261027_65263148_65263321_65266561_65266769_65270934_65271073_65286252
WTC11_00030123	chr15	-	7408	20	NNC	ENSG00000103742.12	novel	6363	20	NA	NA	-1424	20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	8.97055818371543	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGACCATGACTAGAAT	NA	False	NA	-6	True	AATAAA	-35	NA	65412509	65381463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65394625_65394667_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019
WTC11_00030124	chr15	-	6495	20	FSM	ENSG00000103742.12	ENST00000352385.3	6363	20	-112	-20	-112	20	multi-exon	FALSE	canonical	2	9	junction_12	8.45322800543741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGACCATGACTAGAAT	-65422611	True	NA	-6	True	AATAAA	-35	NA	65423059	65381463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019_65411371_65422792
WTC11_00030125	chr15	-	6478	20	NNC	ENSG00000103742.12	novel	6363	20	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	9.9020130022054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATTCTCTTTTGGAA	-65422611	True	NA	-26	True	AATAAA	-15	NA	65423059	65381483	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389415_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019_65411371_65422792
WTC11_00030151	chr15	-	2143	21	FSM	ENSG00000137817.17	ENST00000260376.11	2142	21	0	-1	0	0	multi-exon	TRUE	canonical	3	27	junction_13	33.4790606200353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-72267014	False	34	-7	True	AATAAA	-31	NA	72267523	72241180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474
WTC11_00030154	chr15	-	3889	21	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	209	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	35.4291899427577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-72272281	True	NA	-7	True	AATAAA	-31	NA	72272790	72241180	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
WTC11_00030155	chr15	-	2741	24	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	50.4959898462066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGATCACTGTGGTT	-72272062	False	NA	-11	True	AATAAA	-27	NA	72272571	72241184	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
WTC11_00030162	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.35948716543807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992066	True	NA	NA	False	AATAAA	-32	NA	73992297	73983205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
WTC11_00030163	chr15	-	2181	8	FSM	ENSG00000067221.14	ENST00000316900.9	2169	8	0	-12	0	0	multi-exon	FALSE	canonical	1	1	junction_7	11.3497280377378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992281	False	NA	NA	False	AATAAA	-32	NA	73992348	73983205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73990814_73990946_73992090
WTC11_00030168	chr15	-	661	6	FSM	ENSG00000138629.16	ENST00000566365.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	255.704986263467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74445013	False	NA	-3	True	AATATA	-18	NA	74452378	74445976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295
WTC11_00030171	chr15	-	569	6	FSM	ENSG00000178761.15	ENST00000564019.1	568	6	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.989544833463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCATCCCCCCTAAGCC	-74902928	True	NA	NA	False	NA	NA	NA	74906807	74902708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902784_74904663_74904713_74904981_74905040_74905153_74905232_74906277_74906366_74906586
WTC11_00030177	chr15	-	7647	23	Fusion	ENSG00000140400.18_ENSG00000169375.16	novel	6723	21	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	77.858806834249	77	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTGGGGACGGTGG	-75449190	False	2500	NA	False	NA	NA	NA	75451690	75356605	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_-_75356686_75356792_75357638_75369379_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
WTC11_00030179	chr15	-	4932	21	NIC	ENSG00000169375.16	novel	6723	21	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	75.7740720827382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAACTCTCAACCCAC	-75453319	True	NA	40	True	AATAAA	-22	NA	75455819	75370933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455787
WTC11_00030180	chr15	-	4074	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	4	0	-4	multi-exon	FALSE	canonical	3	202	junction_2	51.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGAAATTGTCATGAT	-75449164	False	2500	NA	False	ATTAAA	-16	NA	75451664	75419213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75422824_75430186_75430409_75451422
WTC11_00030186	chr15	-	993	2	FSM	ENSG00000140374.17	ENST00000560179.2	2608	2	1679	-64	1679	0	multi-exon	FALSE	canonical	3	956	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTTTATTTATT	NA	False	NA	-23	True	AAGAAA	-7	NA	76226493	76216249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848
WTC11_00030205	chr15	-	1238	12	NNC	ENSG00000140395.9	novel	1202	11	NA	NA	0	-984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.447097610181	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCAGGAATGGTGGTGT	-78290075	True	NA	NA	False	AATAGA	-5	NA	78299614	78278818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_78278850_78283234_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
WTC11_00030209	chr15	-	1794	12	FSM	ENSG00000103811.18	ENST00000677448.1	1783	12	0	-11	0	0	multi-exon	FALSE	canonical	2	2	junction_11	24.3985502888665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGGTCCTGGGCCAT	-78944005	True	NA	-25	True	AATAAA	-28	NA	78945049	78921764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537
WTC11_00030236	chr15	-	4253	5	FSM	ENSG00000225151.10	ENST00000559668.5	4253	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	52.1176553578535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230022	84199310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84229851
WTC11_00030242	chr15	-	977	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	-6	0	0	multi-exon	FALSE	canonical	2	10	junction_1	484.643876985978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-84693759	True	NA	-6	True	AATAAA	-24	NA	84716089	84669537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
WTC11_00030247	chr15	-	3269	10	FSM	ENSG00000173867.10	ENST00000649547.1	3269	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	161.320783105366	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAAACGAGTCTATTA	-88545858	True	NA	-33	True	ACTAAA	-6	NA	88546585	88459500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88459864_88464702_88464874_88465586_88465774_88511431_88511587_88512350_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88544610_88544695_88546539
WTC11_00030248	chr15	-	2148	7	NIC	ENSG00000140543.15	novel	2315	6	NA	NA	16	0	intron_retention	FALSE	canonical	2	10	junction_4	19.2498196239745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545891	True	NA	NA	False	AATAAA	-24	NA	88546618	88512479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531474_88531608_88531716_88536311_88536382_88546539
WTC11_00030250	chr15	-	4929	22	ISM	ENSG00000140521.17	ENST00000442287.6	4487	23	-84	413	-84	-49	intron_retention	FALSE	canonical	3	216	junction_19	33.7915445152426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCCCGTGGAGCTT	-89334931	False	NA	NA	False	NA	NA	NA	89334945	89316732	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095
WTC11_00030263	chr15	-	3531	13	NIC	ENSG00000103852.13	novel	3538	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	23.5706679771467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGCTACGGCTTTCTG	-99248110	True	NA	-22	True	AATAAA	-18	NA	99249558	99136405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_99138128_99139316_99139577_99139695_99139745_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99241364_99241560_99249416
WTC11_00030274	chr15	-	1708	4	FSM	ENSG00000184277.13	ENST00000561373.1	1734	4	33	-7	33	2	multi-exon	FALSE	canonical	3	224	junction_1	16.539514973407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTGTTTTCTATATT	-101650649	False	NA	67	True	AATAAA	-21	NA	101650659	101641843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003
WTC11_00030288	chr15	+	200	2	ISM	ENSG00000258684.2	ENST00000556075.2	1147	8	770	3332	770	-3332	internal_fragment	FALSE	canonical	3	37	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTTGAGATTGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	21161074	21164025	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_21161197_21163947
WTC11_00030289	chr15	+	259	1	FSM	ENSG00000273679.1	ENST00000616872.1	1835	1	134	1442	134	-1442	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTTATAACCTTGCTAA	NA	False	NA	NA	False	NA	NA	NA	22371869	22372128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22371900_22372100
WTC11_00030290	chr15	+	6198	34	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-693	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_23	142.59637567082	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494876	22590815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22562027_22562948_22563088_22564388_22564533_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
WTC11_00030291	chr15	+	7848	4	NIC	ENSG00000276550.5	novel	5746	32	NA	NA	-1614	0	intron_retention	FALSE	canonical	3	42	junction_2	326.52343798808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	22575126	False	NA	NA	False	AATAAA	-20	NA	22575144	22590815	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_22577333_22577429_22579478_22579583_22579724_22587343
WTC11_00030292	chr15	+	853	1	FSM	ENSG00000277867.1	ENST00000612222.1	287	1	-314	-252	-314	252	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCCCACAGAAGGGGGAA	22714559	True	NA	NA	False	NA	NA	NA	22714624	22715477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22714600_22715500
WTC11_00030293	chr15	+	341	3	NNC	ENSG00000275325.4	novel	1064	7	NA	NA	-2935	-14088	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAAATAGAGAAATCCT	22724103	False	NA	NA	False	ATTAAA	-19	NA	22724168	22730611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22724236_22727104_22727228_22730460
WTC11_00030294	chr15	+	831	6	NNC	ENSG00000275325.4	novel	1064	7	NA	NA	5570	5588	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	111.584945221118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCCGAATAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	22732673	22750506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22732785_22733980_22734151_22741059_22741309_22742462_22742598_22744603_22744699_22750435
WTC11_00030295	chr15	+	359	3	FSM	ENSG00000275325.4	ENST00000615124.1	579	3	0	220	0	-1	multi-exon	FALSE	canonical	3	9	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGTTTTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	22741179	22744698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22741309_22742462_22742598_22744603
WTC11_00030298	chr15	+	4166	7	FSM	ENSG00000140157.16	ENST00000398014.7	4169	7	3	0	3	0	multi-exon	FALSE	canonical	3	23	junction_4	333.139610373789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827126	True	NA	NA	False	NA	NA	NA	22838647	22869362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
WTC11_00030299	chr15	+	2449	7	NIC	ENSG00000140157.16	novel	2099	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	376.799091765832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827158	True	NA	8	True	AATAAA	-9	NA	22838679	22867716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_22838948_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00030300	chr15	+	2978	6	NIC	ENSG00000140157.16	novel	4082	7	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	346.029131721594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTAGCACTTGAGA	22827158	True	NA	6	True	AATAAA	-18	NA	22838679	22868381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_22838948_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
WTC11_00030301	chr15	+	2674	9	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5893	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	14.7203091000155	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGATGCTCCTGGTTTT	23303010	True	NA	NA	False	AATAAA	-15	NA	23303713	23314563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606_23309736_23310187_23310298_23310802_23310975_23311359_23311513_23311604_23311730_23313104
WTC11_00030302	chr15	+	1594	13	NNC	ENSG00000214265.11	novel	1325	8	NA	NA	-35369	-21694	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	3589.003485765	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24918536	True	NA	21	True	AATAAA	-23	NA	24919664	24978582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24919720_24920010_24920125_24920472_24920548_24921156_24921256_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00030303	chr15	+	3340	11	Fusion	ENSG00000224078.15_ENSG00000128739.23	novel	1468	10	NA	NA	-136	1988	multi-exon	FALSE	canonical	2	4	junction_10	2309.46821584537	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATACATGTCTCATCTAA	24954777	True	NA	NA	False	AGTAAA	-42	NA	24954798	24980711	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406_24979643_24979946
WTC11_00030304	chr15	+	1503	11	NIC	ENSG00000128739.23	novel	1763	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	579	junction_3	2777.47109615924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24828723	True	NA	21	True	AATAAA	-23	NA	24954934	24978582	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00030306	chr15	+	1446	11	NIC	ENSG00000128739.23	novel	1468	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	146	junction_1	3007.08587173695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24828787	True	NA	21	True	AATAAA	-23	NA	24954998	24978582	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24955063_24958737_24958869_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00030307	chr15	+	1163	9	NIC	ENSG00000128739.23	novel	1468	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	383	junction_2	2407.7274003456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24828788	True	NA	21	True	AATAAA	-23	NA	24954999	24978582	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24955063_24962113_24962210_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
WTC11_00030309	chr15	+	17832	11	FSM	ENSG00000224078.15	ENST00000551631.7	17832	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	365.420429095036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	24979543	False	NA	35	True	AATAAA	-31	NA	24979556	25036490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24979643_24979946_24980085_24981774_24982438_24998365_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
WTC11_00030310	chr15	+	1919	6	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	330.422517392505	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	24981980	False	NA	21	True	AATATA	-20	NA	24981993	25002404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24993783_24993852_24998365_24998487_24998969_24999079_25000244_25000375_25001357
WTC11_00030312	chr15	+	1247	7	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	370.257568007281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATATTAACTCATT	24981980	False	NA	5	True	AATACA	-18	NA	24981993	25020825	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_24998969_24999079_25000244_25000375_25002724_25002889_25019026_25019149_25019827_25019870_25020589
WTC11_00030313	chr15	+	34328	7	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_4	233.367676044096	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	24981980	False	NA	35	True	AATAAA	-31	NA	24981993	25036490	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357_25002889_25019026_25019149_25019827_25019870_25020589
WTC11_00030314	chr15	+	6946	40	Fusion	ENSG00000224078.15_ENSG00000207063.1_ENSG00000275529.1	novel	8250	35	NA	NA	0	0	multi-exon	FALSE	canonical	1	2	junction_1	571.24144886327	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	25051443	False	NA	12	True	AATAAA	-2	NA	25051476	25119875	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25052141_25053265_25053364_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030315	chr15	+	6492	36	NNC	ENSG00000224078.15	novel	9815	40	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	573.568098905119	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25059658	False	NA	27	True	CATAAA	-20	NA	25059673	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030316	chr15	+	7713	29	NNC	ENSG00000224078.15	novel	8307	33	NA	NA	298	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_11	572.961866986284	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25070350	False	NA	27	True	CATAAA	-20	NA	25070444	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083366_25083528_25085189_25085323_25087466_25087600_25088607_25088742_25089613_25089867_25091589_25091720_25093833_25093975_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030317	chr15	+	4584	27	NIC	ENSG00000224078.15	novel	8814	35	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	559.549353757058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTACTGGGATTAAGTA	25078759	False	NA	23	True	AATAAA	-13	NA	25078861	25119886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086509_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030319	chr15	+	711	1	FSM	ENSG00000207174.1	ENST00000384445.1	92	1	21	-640	21	640	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGCAGGTTTGTGTT	25081198	False	NA	NA	False	NA	NA	NA	25081307	25082018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081300_25082000
WTC11_00030320	chr15	+	7038	17	NIC	ENSG00000224078.15	novel	7146	20	NA	NA	-416	-11	intron_retention	FALSE	canonical	3	58	junction_14	540.924772380596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCATAAAACCCTTCACC	25086097	False	NA	-2	True	NA	NA	NA	25086110	25120397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25089867_25091589_25091720_25093833_25093975_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25117409_25117516_25118267_25118383_25119064
WTC11_00030321	chr15	+	6032	19	ISM	ENSG00000224078.15	ENST00000655993.1	7238	20	1150	2070	1150	-11	3prime_fragment	FALSE	canonical	3	728	junction_4	342.034436213016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCATAAAACCCTTCACC	25087622	False	NA	-2	True	NA	NA	NA	25087676	25120397	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030322	chr15	+	5076	20	NNC	ENSG00000224078.15	novel	7238	20	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	494.289865275556	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25088791	False	NA	27	True	CATAAA	-20	NA	25088803	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096888_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030323	chr15	+	3891	19	NIC	ENSG00000224078.15	novel	5995	19	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_7	488.777073703112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	25091526	True	NA	27	True	CATAAA	-20	NA	25091694	25120426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
WTC11_00030324	chr15	+	1783	9	NNC	ENSG00000186297.12	novel	2761	11	NA	NA	5	-131	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	85.1512441189205	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGATTATTAGTTGACC	26865052	True	NA	NA	False	AATAAA	-16	NA	26867130	26948621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_26867385_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
WTC11_00030325	chr15	+	2500	9	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	61.0384100382702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	26865084	True	NA	18	True	AATAAA	-21	NA	26867162	26949208	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_26867385_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
WTC11_00030328	chr15	+	290	2	ISM	ENSG00000206149.11	ENST00000529537.2	1001	8	28733	14619	-14902	-14619	internal_fragment	FALSE	canonical	3	71	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTGCGAATTTTGGC	NA	False	NA	NA	False	NA	NA	NA	28618220	28618655	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28618379_28618523
WTC11_00030329	chr15	+	4492	24	NNC	ENSG00000206149.11	novel	5187	33	NA	NA	4374	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	189.395905641395	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACACCCATTATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	28637498	28685264	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28637631_28640258_28640393_28640921_28641093_28641169_28641313_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651556_28654286_28654456_28655272_28655421_28655494_28655692_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684391
WTC11_00030330	chr15	+	2947	14	FSM	ENSG00000206149.11	ENST00000528584.5	2947	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	245.216508609585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACACCCATTATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	28654441	28685264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28654456_28655272_28655421_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684128
WTC11_00030331	chr15	+	3294	5	FSM	ENSG00000261377.6	ENST00000566178.5	3351	5	-20	77	17	-77	multi-exon	FALSE	canonical	1	2	junction_4	21.7987958383026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTTAATGTGTGTTT	28831700	True	NA	NA	False	NA	NA	NA	28832300	28858930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28832461_28833275_28833379_28838687_28838823_28846738_28846837_28856132
WTC11_00030332	chr15	+	2111	1	FSM	ENSG00000270055.1	ENST00000602663.1	2351	1	240	0	240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTTTTCTGGTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	30488202	30490313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30488200_30490300
WTC11_00030333	chr15	+	523	1	FSM	ENSG00000206846.1	ENST00000384119.1	94	1	-466	37	-466	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCACTCCCACTGCTT	NA	False	NA	NA	False	NA	NA	NA	30673283	30673806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30673300_30673800
WTC11_00030334	chr15	+	7424	14	FSM	ENSG00000198690.10	ENST00000656307.1	7413	14	-11	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.2415549179237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	30899989	True	NA	NA	False	NA	NA	NA	30903900	30943056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
WTC11_00030338	chr15	+	1788	8	FSM	ENSG00000175344.19	ENST00000437966.3	1788	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.55928946018454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCCAATAATTGACTG	32029880	True	NA	NA	False	AATAAA	-15	NA	32030555	32168888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
WTC11_00030339	chr15	+	4748	13	NIC	ENSG00000198826.11	novel	3152	13	NA	NA	0	-896	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	84.3499242573591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTAAGGCTCTCATGA	32615017	True	NA	21	True	ATTAAA	-21	NA	32615538	32639045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
WTC11_00030340	chr15	+	1171	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	-23	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	55.1968069728675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	32639463	True	NA	21	True	AATAAA	-11	NA	32641675	32697088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
WTC11_00030343	chr15	+	238	1	FSM	ENSG00000207091.1	ENST00000384363.1	101	1	-163	26	-163	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCCTTCACTTGACCAG	NA	False	NA	NA	False	NA	NA	NA	34314564	34314802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34314600_34314800
WTC11_00030345	chr15	+	1062	1	FSM	ENSG00000259397.3	ENST00000594613.1	730	1	-264	-68	-264	68	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATTTTTTTAAACAACA	NA	False	NA	NA	False	NA	NA	NA	35092216	35093278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35092200_35093300
WTC11_00030346	chr15	+	6574	8	NNC	ENSG00000166068.13	novel	7270	7	NA	NA	-843	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	84.5472938535539	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTGAAATAGTGTTT	NA	False	NA	5	True	AATAAA	-14	NA	38251992	38357244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013_38355418_38356951
WTC11_00030347	chr15	+	733	1	FSM	ENSG00000276107.1	ENST00000478845.2	733	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCTTGTCCTAATCAT	39586540	False	NA	NA	False	NA	NA	NA	39586560	39587293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39586600_39587300
WTC11_00030348	chr15	+	446	1	FSM	ENSG00000246863.2	ENST00000558675.1	4811	1	-60	4425	-32	-3444	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTACGGATGCAGAGA	39920960	True	NA	NA	False	AGTAAA	-36	NA	39921009	39921455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39921000_39921500
WTC11_00030350	chr15	+	583	4	FSM	ENSG00000156970.13	ENST00000560120.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	406.400732720249	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATTCAACAGAAGGCT	40139726	True	NA	NA	False	NA	NA	NA	40161022	40176621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40170061_40170122_40170536_40170682_40176476
WTC11_00030351	chr15	+	3611	1	FSM	ENSG00000273786.1	ENST00000613987.1	684	1	-3190	263	-3190	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTAAAAATAAGTAGTGA	40223146	False	NA	NA	False	NA	NA	NA	40223195	40226806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40223200_40226800
WTC11_00030352	chr15	+	3085	1	FSM	ENSG00000260648.3	ENST00000568093.3	4028	1	540	403	540	-403	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGGGAGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	40232621	40235706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40232600_40235700
WTC11_00030353	chr15	+	3692	10	NIC	ENSG00000137843.12	novel	2540	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	33	junction_5	8.31479419283098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTCCTGTGTCTCTG	40251833	True	NA	10	True	ATTAAA	-18	NA	40252555	40277487	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
WTC11_00030356	chr15	+	767	6	FSM	ENSG00000128928.10	ENST00000558610.5	819	6	52	0	52	0	multi-exon	FALSE	canonical	2	5	junction_1	192.61256449152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTATAGGTGGGTGCA	40406114	False	NA	NA	False	NA	NA	NA	40406125	40411690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40406351_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554
WTC11_00030359	chr15	+	649	3	FSM	ENSG00000137880.6	ENST00000559445.1	626	3	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTGCGCCTGT	40757614	True	NA	7	True	AATAAA	-7	NA	40764103	40767699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40764217_40765859_40765922_40767225
WTC11_00030360	chr15	+	2667	1	FSM	ENSG00000188277.10	ENST00000344320.8	2470	1	-118	-79	-118	79	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCAGGCCAGTTTGTTT	40769783	False	NA	82	True	NA	NA	NA	40769861	40772528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40769900_40772500
WTC11_00030364	chr15	+	7452	5	NNC	ENSG00000247556.6	novel	8829	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	300.191084977552	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259271	True	NA	15	True	AATAAA	-28	NA	41283973	41306534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41301022_41302429
WTC11_00030366	chr15	+	4172	20	NNC	ENSG00000092445.12	novel	8032	19	NA	NA	-361	9811	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	73.9311276415356	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCCTTGTCCAAATGT	41558460	False	NA	NA	False	AAAAAG	-9	NA	41558850	41593400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_41559382_41561126_41561311_41561538_41561640_41562547_41562719_41564183_41564271_41565025_41565142_41567359_41567538_41568216_41568363_41568877_41569023_41570026_41570157_41570239_41570341_41570603_41570700_41571037_41571119_41571594_41571688_41572442_41572565_41573001_41573112_41573307_41573468_41573678_41573816_41577885_41579333_41593364
WTC11_00030367	chr15	+	2004	1	FSM	ENSG00000092445.12	ENST00000568490.1	2004	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTCTCTTTTTTTTT	41577289	False	NA	NA	False	AATAAA	-21	NA	41577334	41579338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41577300_41579300
WTC11_00030368	chr15	+	13810	24	NIC	ENSG00000174197.18	novel	12046	24	NA	NA	-29	-1491	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	14.752014376564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAATGTTTAGACTGT	41658139	True	NA	3	True	AATAAA	-13	NA	41660437	41771590	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
WTC11_00030370	chr15	+	8004	25	NIC	ENSG00000168970.22	novel	7227	24	NA	NA	-1631	-3	intron_retention	FALSE	canonical	3	30	junction_15	34.3898957624991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGCGCTGAGACC	41831183	False	NA	16	True	NA	NA	NA	41833414	41848140	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843125_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
WTC11_00030372	chr15	+	908	10	FSM	ENSG00000092529.25	ENST00000569827.5	908	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGTAAAGCATAGGCACA	NA	False	NA	NA	False	NA	NA	NA	42402417	42411341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42402559_42402793_42403003_42403740_42403778_42409302_42409381_42409786_42409845_42409930_42409996_42410427_42410497_42410587_42410667_42410883_42411001_42411286
WTC11_00030373	chr15	+	709	4	ISM	ENSG00000137814.12	ENST00000260372.8	3921	6	20	8287	0	20	5prime_fragment	FALSE	canonical	3	103	junction_2	14.7648230602334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCATTGTTGAGTTAATG	42544365	True	NA	25	True	AATAAA	-40	NA	42548857	42561707	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269
WTC11_00030374	chr15	+	623	1	FSM	ENSG00000260490.2	ENST00000569826.2	507	1	-44	-72	-44	72	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAACCTGTTGCATGC	NA	False	NA	NA	False	NA	NA	NA	42571882	42572505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42571900_42572500
WTC11_00030378	chr15	+	2400	18	NIC	ENSG00000137822.13	novel	6812	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	22.0748961053565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTCTACCTTTTCTCC	43368696	True	NA	8	True	AATAAA	-18	NA	43371112	43405323	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_43371433_43376097_43376227_43376454_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
WTC11_00030379	chr15	+	2339	19	NIC	ENSG00000137822.13	novel	6812	18	NA	NA	61	-23	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	27.4397769310301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATAAATATCTGCGGC	43368745	True	NA	-19	True	AAAACA	-17	NA	43371161	43405296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43399111_43399175_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
WTC11_00030382	chr15	+	1880	10	NNC	ENSG00000237289.10	novel	1779	10	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	78.3638238531587	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43592839	True	NA	20	True	AGTAAA	-20	NA	43592889	43599406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_43593272_43594107_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
WTC11_00030384	chr15	+	411	3	NNC	ENSG00000140264.21	novel	2543	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4823.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	43712903	True	NA	-1	True	NA	NA	NA	43792346	43793975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_43792384_43792974_43793083_43793709
WTC11_00030385	chr15	+	1574	7	FSM	ENSG00000140263.15	ENST00000558789.5	1553	7	-21	0	-8	0	multi-exon	FALSE	canonical	1	3	junction_3	161.194930303517	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTGCTGGGCACTTT	45014676	True	NA	NA	False	NA	NA	NA	45023159	45070682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45065270_45065390_45068180_45068247_45068876_45069053_45069858
WTC11_00030386	chr15	+	3897	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	-115	-1943	28	6	multi-exon	FALSE	canonical	3	14	junction_2	45.088801270382	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTTATCAAGCATCCT	45587159	False	NA	15	True	AATAAA	-23	NA	45587263	45609716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
WTC11_00030387	chr15	+	200	2	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTTCTTAAGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	47257158	47315166	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_47257201_47315008
WTC11_00030389	chr15	+	6727	1	FSM	ENSG00000275580.1	ENST00000617563.1	647	1	-6099	19	-6099	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATTATTTTCATTT	49337471	False	NA	NA	False	AAGAAA	-30	NA	49337508	49344235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49337500_49344200
WTC11_00030390	chr15	+	339	1	FSM	ENSG00000259388.1	ENST00000558657.1	1852	1	250	1263	250	-1263	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAACAGAAGTCCCACCT	NA	False	NA	NA	False	NA	NA	NA	49794495	49794834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49794500_49794800
WTC11_00030391	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50355546_50370331
WTC11_00030394	chr15	+	5505	19	NIC	ENSG00000138592.14	novel	19026	20	NA	NA	-17	1385	intron_retention	FALSE	canonical	3	77	junction_1	67.8524179177423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGATTAATGTTTATC	50418340	True	NA	12	True	AATAAA	-19	NA	50424476	50501080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
WTC11_00030395	chr15	+	561	3	FSM	ENSG00000259240.1	ENST00000559909.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCCCAGCCGCCTGCC	51037466	False	NA	NA	False	NA	NA	NA	51037487	51293912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51037682_51277982_51278051_51293613
WTC11_00030396	chr15	+	9145	10	FSM	ENSG00000128872.10	ENST00000249700.9	9150	10	0	5	0	-5	multi-exon	TRUE	canonical	2	5	junction_7	2.00616334280753	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTAAAGACTGGTTTT	51751006	True	NA	NA	False	AATAAA	-15	NA	51751596	51816358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720_51782829_51798196_51798341_51806376_51806522_51808419
WTC11_00030397	chr15	+	688	1	FSM	ENSG00000231169.4	ENST00000567221.2	672	1	39	-55	39	55	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCAGACTCTTGGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	52505229	52505917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52505200_52505900
WTC11_00030399	chr15	+	1085	7	ISM	ENSG00000151575.14	ENST00000537232.5	1768	13	21	54280	12	299	5prime_fragment	FALSE	canonical	3	11	junction_2	15.6781872534919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTGATTGAATACATT	56364451	True	NA	12	True	AATAAA	-16	NA	56365458	56391717	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_56365478_56365578_56365894_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242
WTC11_00030401	chr15	+	4834	21	NIC	ENSG00000140262.18	novel	6114	21	NA	NA	-51	-2	combination_of_known_junctions	FALSE	canonical	3	67	junction_18	61.0222090717798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACACAGTAAAATAGTGA	56918389	True	NA	7	True	AATAAA	-16	NA	56918571	57288504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273032_57273263_57282444_57282599_57286156
WTC11_00030402	chr15	+	4786	21	FSM	ENSG00000140262.18	ENST00000438423.6	4786	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.949894291676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGAGTTTTTTACA	56918361	False	NA	17	True	AATAAA	-26	NA	56918622	57288514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
WTC11_00030403	chr15	+	4833	22	NIC	ENSG00000140262.18	novel	6114	21	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	82.5367368216727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACACAGTAAAATAGTGAG	56912467	True	NA	8	True	AATAAA	-17	NA	56918638	57288505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57072652_57072715_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
WTC11_00030407	chr15	+	3651	4	FSM	ENSG00000255529.9	ENST00000380557.4	3629	4	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTCGTGTTTGGTGTCT	57701705	True	NA	NA	False	TATAAA	-15	NA	57706702	57717554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57706956_57709184_57709359_57711983_57712189_57714535
WTC11_00030415	chr15	+	2460	17	NNC	ENSG00000140455.17	novel	2439	16	NA	NA	0	-124	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	59.507221200456	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTCTTTTTGCCTGTA	63502208	True	NA	NA	False	NA	NA	NA	63504594	63591320	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63567212_63567318_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
WTC11_00030422	chr15	+	3101	15	FSM	ENSG00000166839.17	ENST00000319580.13	3101	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	6.90348920947271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAAATCCAGTACTCA	64911402	True	NA	NA	False	AATAAA	-20	NA	64911901	64958691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64911965_64915796_64915901_64917385_64917515_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64957102
WTC11_00030423	chr15	+	1518	12	FSM	ENSG00000166839.17	ENST00000395720.2	1518	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	5.88175495258975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTATTTCTTCTTCTT	64921427	False	NA	NA	False	NA	NA	NA	64921926	64951261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64950953
WTC11_00030432	chr15	+	6205	16	NIC	ENSG00000033800.14	novel	7980	14	NA	NA	10	-202	intron_retention	FALSE	canonical	0	0	junction_15	69.2366633768234	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGTGGGAATCCAGC	68049201	True	NA	NA	False	NA	NA	NA	68054327	68193645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541_68191807_68192153_68192303_68193515
WTC11_00030433	chr15	+	1965	12	NNC	ENSG00000103647.13	novel	3545	12	NA	NA	114	-5759	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	7.24996437722796	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTAGCACTCTTCCTG	68578798	False	NA	NA	False	ATTAAA	-14	NA	68579106	68720318	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_68579278_68645159_68645361_68695139_68695257_68710731_68710882_68711541_68711707_68713924_68714042_68714558_68714664_68715214_68715312_68718697_68718811_68719143_68719235_68719412_68719553_68719820
WTC11_00030435	chr15	+	3239	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	0	-80	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	115.431180527692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAATAATAACCATTTT	69410088	True	NA	-4	True	AATAAA	-13	NA	69414348	69448316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
WTC11_00030436	chr15	+	2761	19	NIC	ENSG00000137807.16	novel	3620	23	NA	NA	0	-80	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	124.275741303535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAATAATAACCATTTT	69410088	True	NA	-4	True	AATAAA	-13	NA	69414348	69448316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69444789_69445042_69446008_69446092_69446870_69446942_69447791
WTC11_00030444	chr15	+	2401	12	ISM	ENSG00000179335.20	ENST00000395066.9	1854	13	44	83	8	0	intron_retention	FALSE	canonical	3	200	junction_1	37.793261019822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74611654	True	NA	17	True	AATAAA	-21	NA	74615879	74630118	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
WTC11_00030445	chr15	+	2394	12	NIC	ENSG00000179335.20	novel	3591	9	NA	NA	0	-21	intron_retention	FALSE	canonical	3	23	junction_1	78.199575150502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTCTTACTGTTTG	74611689	True	NA	-6	True	TATAAA	-9	NA	74615914	74630095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
WTC11_00030447	chr15	+	1476	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	5	0	1	0	multi-exon	FALSE	canonical	3	125	junction_1	30.2892720282281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	74885725	True	NA	NA	False	AATACA	-39	NA	74890046	74896930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
WTC11_00030448	chr15	+	4115	1	FSM	ENSG00000178802.18	ENST00000566556.1	2795	1	-1322	2	-1322	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGTGGGGTAATGAGCA	74894090	False	NA	13	True	ATTAAA	-15	NA	74894111	74898226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74894100_74898200
WTC11_00030451	chr15	+	3401	7	FSM	ENSG00000198794.12	ENST00000562212.5	3400	7	-1	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	63.4892816850914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTGCTGTGTCATGT	74990543	True	NA	14	True	AATAAA	-19	NA	74995562	75021493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018393_75018536_75018788
WTC11_00030465	chr15	+	3736	1	FSM	ENSG00000140382.15	ENST00000558288.1	3558	1	-182	4	-182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77481844	False	NA	19	True	ATTAAA	-17	NA	77481867	77485603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77481900_77485600
WTC11_00030468	chr15	+	3621	3	FSM	ENSG00000140403.13	ENST00000493321.1	1134	3	-841	-1646	-841	0	multi-exon	FALSE	canonical	3	26	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGTGGCTTTGCTTTTT	78273766	False	NA	13	True	ATTAAA	-18	NA	78274155	78282191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78275729_78280044_78280146_78280244
WTC11_00030475	chr15	+	1442	4	NNC	ENSG00000166557.14	novel	1418	3	NA	NA	0	18379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	208.600095877255	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGAAAGAAAGCCAGCA	79303797	True	NA	NA	False	AAAAAG	-1	NA	79311111	79341219	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_79311418_79313756_79314006_79321977_79322839_79341193
WTC11_00030478	chr15	+	273	2	FSM	ENSG00000259343.8	ENST00000560973.1	273	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATTGATCCTATTTTAA	81324115	True	NA	NA	False	NA	NA	NA	81324437	81341710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_81324562_81341561
WTC11_00030482	chr15	+	758	2	FSM	ENSG00000140600.17	ENST00000564054.1	758	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCGACATTCCTGAT	NA	False	NA	-30	True	AAGAAA	-13	NA	83609269	83618642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_83609467_83618081
WTC11_00030488	chr15	+	8301	11	NNC	ENSG00000166716.10	novel	8187	11	NA	NA	-219	5	intron_retention	FALSE	canonical	2	18	junction_9	46.6651904528418	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCTTACCATTGTAGT	84748343	False	NA	6	True	ATTAAA	-22	NA	84748372	84806435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_84748665_84764706_84764816_84782656_84784896_84790704_84790884_84797868_84798046_84798314_84798475_84798587_84798876_84799097_84799211_84799841_84799978_84801568_84801604_84801862
WTC11_00030493	chr15	+	3448	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	287.732900833781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610919	True	NA	25	True	AATAAA	-18	NA	88621378	88632281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_88621798_88626145_88626750_88629225_88629427_88630057
WTC11_00030495	chr15	+	1046	10	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_2	176.36123142748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236524	True	NA	8	True	AATAAA	-14	NA	89243989	89268631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244034_89247628_89247727_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
WTC11_00030497	chr15	+	1044	10	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	114.598278486628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236565	True	NA	8	True	AATAAA	-14	NA	89244030	89268631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
WTC11_00030498	chr15	+	4155	39	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	135.362530055168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236572	True	NA	22	True	AATAAA	-22	NA	89244037	89316481	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244068_89245606_89245709_89247628_89247727_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
WTC11_00030501	chr15	+	4579	5	NNC	ENSG00000140548.10	novel	1191	3	NA	NA	785	0	intron_retention	FALSE	canonical	1	2	junction_1	30.1693138801664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTGACTGCAAATGCT	90003204	False	NA	14	True	AATAAA	-14	NA	90003270	90082191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_90003465_90067109_90068596_90073070_90073263_90074115_90074291_90079659
WTC11_00030505	chr15	+	4236	22	FSM	ENSG00000197299.13	ENST00000681142.1	4270	22	-13	47	4	-47	multi-exon	FALSE	canonical	1	1	junction_21	55.0568043086436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCCCCAAAGTGCTGGA	90711422	True	NA	NA	False	NA	NA	NA	90717349	90811909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90811844
WTC11_00030508	chr15	+	6178	24	Fusion	ENSG00000166965.13_ENSG00000140564.13	novel	4191	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_16	50.6975911330299	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTCAAGTGATACAGC	90871452	True	NA	-3	True	NA	NA	NA	90871538	90962324	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_90871606_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285_90883456_90955702_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
WTC11_00030520	chr15	+	1174	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.1454805899657	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCATTTGTCTTCTGT	99249991	True	NA	9	True	AATATA	-16	NA	99251514	99386292	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99352368_99352472_99361335_99361512_99363105_99363266_99386029
WTC11_00030523	chr15	+	1253	7	ISM	ENSG00000068305.18	ENST00000691492.1	2633	10	-30	23117	1	19002	5prime_fragment	FALSE	canonical	3	63	junction_1	46.9518074436142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGAAGAGACAAGTCT	99561204	True	NA	10	True	AATAAA	-19	NA	99565987	99690564	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_99566105_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240
WTC11_00030524	chr15	+	5453	11	NIC	ENSG00000068305.18	novel	574	4	NA	NA	17	0	intron_retention	FALSE	canonical	2	6	junction_1	57.0842360025953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAGACAATGCTAAAG	99566432	False	NA	15	True	AATAAA	-25	NA	99566499	99716406	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99566600_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
WTC11_00030527	chr15	-	828	5	ISM	ENSG00000180229.12	ENST00000429257.5	4088	26	61047	7860	-3745	-256	internal_fragment	FALSE	canonical	3	44	junction_3	32.7948166636132	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCGGGAAGGCCTTCC	NA	False	NA	NA	False	NA	NA	NA	20444415	20438952	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226
WTC11_00030528	chr15	-	2768	18	NNC	ENSG00000180229.12	novel	4088	26	NA	NA	-10	-1554	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	55.1751536278303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGAGATTTGATGTGAA	-20505446	False	NA	NA	False	NA	NA	NA	20505495	20445856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20476924_20477057_20477201_20477362_20483402_20483518_20505390
WTC11_00030529	chr15	-	2476	16	ISM	ENSG00000180229.12	ENST00000428453.5	4383	27	666	62742	-10	-1554	internal_fragment	FALSE	canonical	3	52	junction_1	50.8103226607437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGAGATTTGATGTGAA	-20505446	False	NA	NA	False	NA	NA	NA	20505495	20445856	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20483402_20483518_20505390
WTC11_00030530	chr15	-	621	1	FSM	ENSG00000258712.2	ENST00000556905.2	1089	1	472	-4	472	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATACATCTCATCTGTG	NA	False	NA	NA	False	NA	NA	NA	21373409	21372788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_21372800_21373400
WTC11_00030532	chr15	-	440	1	FSM	ENSG00000223877.4	ENST00000460876.2	622	1	249	-67	249	67	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAACAGAGGCATCACA	NA	False	NA	NA	False	AATAAA	-30	NA	22152648	22152208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22152200_22152600
WTC11_00030534	chr15	-	3538	22	NIC	ENSG00000275835.5	novel	3744	23	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	24.6072090906105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTTATTATCCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	23039556	22999180	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
WTC11_00030535	chr15	-	487	1	FSM	ENSG00000279735.2	ENST00000623624.1	418	1	18	-87	18	87	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGACGAGGACGACG	NA	False	NA	NA	False	NA	NA	NA	25092359	25091872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25091900_25092400
WTC11_00030540	chr15	-	2370	1	FSM	ENSG00000185115.6	ENST00000332303.6	4834	1	-20	2484	-20	-2484	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTTAAGCTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	29269842	29267472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29267500_29269800
WTC11_00030541	chr15	-	6851	26	NIC	ENSG00000104067.17	novel	7190	28	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_25	139.630850459345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTTGGTCTGTTTG	NA	False	NA	-31	True	AATAAA	-16	NA	29822465	29700151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_29701690_29704200_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29822001
WTC11_00030544	chr15	-	573	7	FSM	ENSG00000166664.15	ENST00000562729.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.24952105697718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGACCTAGTGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	30393849	30372992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30373146_30377029_30377110_30380352_30380400_30383318_30383383_30386862_30386988_30393251_30393300_30393793
WTC11_00030545	chr15	-	394	1	FSM	ENSG00000259358.1	ENST00000559530.1	2459	1	1090	975	1090	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGTTCAAGACCAAGAG	NA	False	NA	NA	False	NA	NA	NA	31767111	31766717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_31766700_31767100
WTC11_00030546	chr15	-	448	1	FSM	ENSG00000201084.1	ENST00000364214.1	105	1	-426	83	-426	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAAGGAATTGATTACA	NA	False	NA	NA	False	TTTAAA	-45	NA	32175777	32175329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_32175300_32175800
WTC11_00030547	chr15	-	562	2	FSM	ENSG00000259287.2	ENST00000560268.2	562	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGACTTTGCTCTCTGT	-33864807	False	NA	NA	False	AATAAA	-21	NA	33864825	33858601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_33859095_33864756
WTC11_00030548	chr15	-	1089	6	NNC	ENSG00000134153.10	novel	1069	5	NA	NA	0	10027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.412448435425	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAAAGAAA	-34093620	True	NA	NA	False	NA	NA	NA	34101862	34073989	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34074016_34084022_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
WTC11_00030550	chr15	-	5111	25	FSM	ENSG00000140199.13	ENST00000559664.5	5111	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.01550147457343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTCAGTGTATACTT	-34315733	False	NA	1	True	TTTAAA	-9	NA	34337786	34233258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238332_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34336409
WTC11_00030552	chr15	-	536	3	NNC	ENSG00000182117.6	novel	507	2	NA	NA	0	14860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3040	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCAGTTGTGGTGGTGT	-34321083	True	NA	NA	False	NA	NA	NA	34343136	34326858	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34326887_34341717_34342109_34343019
WTC11_00030553	chr15	-	2805	3	ISM	ENSG00000175265.18	ENST00000432566.6	4577	15	5313	-6	5313	3	3prime_fragment	FALSE	canonical	3	157	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTGCCTTAAAATTT	NA	False	NA	-13	True	AATAAA	-22	NA	34382067	34379064	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34381614_34381700_34381857_34381967
WTC11_00030554	chr15	-	5483	20	NIC	ENSG00000175265.18	novel	5777	25	NA	NA	-67	-3083	intron_retention	FALSE	canonical	3	19	junction_19	29.0509152811122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGAGTGGGAGGCCAGG	-34437057	False	NA	NA	False	NA	NA	NA	34437875	34382153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34387953_34389643_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523_34407736_34435382_34435472_34437397
WTC11_00030557	chr15	-	3982	11	NNC	ENSG00000215252.12	novel	4252	15	NA	NA	1402	-7	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	31.2776277872859	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTATGGGGTGAA	NA	False	NA	98	True	AATAAA	-14	NA	34531574	34525101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528748_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474
WTC11_00030560	chr15	-	554	2	Antisense	novelGene_ENSG00000259397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAATAAAAGTAAGAACAA	NA	False	NA	-31	True	NA	NA	NA	35096571	35080687	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_-_35081196_35096525
WTC11_00030561	chr15	-	1268	1	FSM	ENSG00000259592.1	ENST00000561466.1	512	1	-196	-560	-196	560	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTACTTTCAGTTATTT	NA	False	NA	-6	True	AATAAA	-45	NA	35122280	35121012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35121000_35122300
WTC11_00030562	chr15	-	278	3	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATAATCAGAGAGGCA	-35239889	False	NA	NA	False	NA	NA	NA	35239901	35239455	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_35239508_35239633_35239828_35239869
WTC11_00030563	chr15	-	278	3	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	219	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATAATCAGAGAGGCA	-35239931	False	NA	NA	False	NA	NA	NA	35239943	35239455	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_35239508_35239633_35239828_35239911
WTC11_00030565	chr15	-	778	6	NNC	ENSG00000140319.11	novel	791	6	NA	NA	0	11292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3414.4300022112	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACCTAGTGACTGTGTA	-39967702	True	NA	NA	False	AAAAAG	-6	NA	40039162	40024397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_40024427_40036040_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
WTC11_00030570	chr15	-	1284	1	FSM	ENSG00000176753.5	ENST00000559727.1	1194	1	50	-140	-9	140	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTCAAGTGGTGGCTGG	-40252900	True	NA	NA	False	NA	NA	NA	40252919	40251635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40251600_40252900
WTC11_00030571	chr15	-	4693	1	FSM	ENSG00000230778.2	ENST00000434396.2	4693	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGCCTCTCTTTGCCT	-40283050	False	NA	-1	True	AATAAA	-24	NA	40283064	40278371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40278400_40283100
WTC11_00030573	chr15	-	688	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	387	0	-387	multi-exon	FALSE	canonical	3	56	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTCTCTCATGTTCTT	-40563762	True	NA	NA	False	AATGAA	-19	NA	40565042	40557007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40557373_40562771_40563028_40564975
WTC11_00030574	chr15	-	1093	11	NIC	ENSG00000104129.10	novel	3721	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	67.8162959767046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGATTTTACC	-40802695	True	NA	-16	True	AATAAA	-6	NA	40807457	40767881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
WTC11_00030576	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	215.264178781948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	-41332477	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
WTC11_00030582	chr15	-	2763	19	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	11	-80	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	85.6185914966869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	-42269537	True	NA	NA	False	TATAAA	-15	NA	42273421	42210531	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
WTC11_00030586	chr15	-	4499	28	NIC	ENSG00000140326.13	novel	4657	28	NA	NA	18	-4	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	12.284688854298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAAGGGCTTGATGTCT	-42735866	False	NA	NA	False	AATAAA	-11	NA	42737036	42723565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727667_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736082_42736301_42736781_42737012
WTC11_00030587	chr15	-	3745	8	NNC	ENSG00000067369.14	novel	2222	7	NA	NA	-989	465	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	106.630202100531	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACACGTTCTAGTCAAA	-43418192	False	NA	NA	False	GATAAA	-32	NA	43418205	43406743	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43414052_43414117_43415593_43415810_43416224
WTC11_00030589	chr15	-	4310	20	ISM	ENSG00000168781.23	ENST00000381885.5	5596	30	6708	29	-1208	-16	3prime_fragment	FALSE	canonical	3	47	junction_13	10.5958231461291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAACTAATGAGAATGGT	NA	False	NA	-30	True	AATAAA	-1	NA	43578156	43533490	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43535477_43539469_43539584_43558794_43558933_43564102_43564166_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573149_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069
WTC11_00030590	chr15	-	1255	11	ISM	ENSG00000168781.23	ENST00000420765.6	5831	32	12	45599	0	0	5prime_fragment	FALSE	canonical	3	25	junction_10	17.1627503623399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCACGGAGGCTGAG	-43588894	True	NA	NA	False	NA	NA	NA	43590196	43579073	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798_43584893_43590171
WTC11_00030591	chr15	-	494	3	FSM	ENSG00000168781.23	ENST00000472547.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCCTGGTGTCTTT	-43583150	False	NA	NA	False	NA	NA	NA	43584452	43582749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43582953_43583403_43583600_43584357
WTC11_00030592	chr15	-	4331	28	Fusion	ENSG00000166762.19_ENSG00000249839.1	novel	1684	5	NA	NA	-5694	-68	intron_retention	FALSE	canonical	3	4	junction_1	18.7616630392937	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGAGACCAGCCTGACCAA	NA	False	NA	NA	False	NA	NA	NA	43690033	43639489	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_-_43640497_43664417_43664544_43668027_43668119_43670976_43671142_43671288_43671406_43672333_43672442_43672598_43672714_43672921_43673050_43673373_43673598_43673786_43673929_43675935_43676119_43676391_43676514_43676672_43676805_43677017_43677101_43677186_43677297_43677440_43677517_43677634_43677722_43678589_43678692_43680836_43680959_43681061_43681224_43681687_43681790_43681929_43682085_43682398_43682485_43682696_43682788_43683238_43683435_43684192_43684368_43684633_43684728_43690003
WTC11_00030597	chr15	-	1124	1	FSM	ENSG00000185607.5	ENST00000418351.1	1124	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACTGTGACTTAGTTGC	NA	False	NA	NA	False	NA	NA	NA	43990184	43989060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43989100_43990200
WTC11_00030598	chr15	-	7280	37	FSM	ENSG00000104133.16	ENST00000559511.6	7279	37	0	-1	0	0	multi-exon	TRUE	canonical	1	2	junction_7	19.6512808617192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661243	True	NA	-1	True	AATAAA	-17	NA	44663647	44562695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00030599	chr15	-	7632	39	FSM	ENSG00000104133.16	ENST00000683734.1	7612	39	0	-20	0	0	multi-exon	FALSE	canonical	1	1	junction_9	19.4158458289119	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661258	True	NA	-1	True	AATAAA	-17	NA	44663662	44562695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
WTC11_00030601	chr15	-	2440	6	FSM	ENSG00000138606.20	ENST00000560471.5	2499	6	0	59	0	-59	multi-exon	FALSE	canonical	1	1	junction_3	67.2119037076023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGATATTGCGCCATTGC	-45186341	True	NA	NA	False	NA	NA	NA	45187955	45170724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45172003_45172148_45172319_45173575_45173717_45175218_45175426_45178164_45178307_45187453
WTC11_00030605	chr15	-	480	1	FSM	ENSG00000275709.1	ENST00000619041.1	548	1	-45	113	-45	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAGCATTCTCCTAAA	-45586255	False	NA	NA	False	NA	NA	NA	45586349	45585869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45585900_45586300
WTC11_00030606	chr15	-	10125	15	NIC	ENSG00000104177.19	novel	1966	16	NA	NA	-6	3	intron_retention	FALSE	non_canonical	0	0	junction_12	46.686153608704	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGCCCTGTTGTCCATC	-48169220	True	NA	-1	True	AATAAA	-18	NA	48178332	48134628	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
WTC11_00030607	chr15	-	4390	10	ISM	ENSG00000104177.19	ENST00000267836.10	2958	16	19516	-2350	83	-15	3prime_fragment	FALSE	canonical	3	101	junction_3	24.031358114753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATCCTATGAATTTGA	-48158827	False	39	-24	True	AATAAA	-1	NA	48158837	48139446	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768
WTC11_00030609	chr15	-	3121	16	NNC	ENSG00000104177.19	novel	1966	16	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	60.4444281045729	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAGGTATATAGCTTAT	-48169178	True	NA	NA	False	ATTAAA	-9	NA	48178290	48141806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_48143072_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48162676_48162894_48165932_48166027_48167341_48167402_48168630_48168840_48178076
WTC11_00030612	chr15	-	1781	9	NIC	ENSG00000104177.19	novel	1029	4	NA	NA	7	-13	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	58.3068392214841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCTATTGTTTTTAC	-48169172	True	NA	-26	True	NA	NA	NA	48178284	48157148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48157899_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
WTC11_00030614	chr15	-	2183	5	FSM	ENSG00000166262.16	ENST00000559573.3	2204	5	0	21	0	-13	multi-exon	FALSE	canonical	2	3	junction_4	15.2704780540755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTATGATTAATTTAGCA	-49396258	True	NA	-21	True	AATAAA	-30	NA	49396442	49326982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974_49396098_49396243
WTC11_00030615	chr15	-	4256	9	NIC	ENSG00000104064.18	novel	4609	9	NA	NA	7	-269	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	68.2110694828926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTTATGGTGGTGGA	-50351598	True	NA	NA	False	NA	NA	NA	50355117	50275657	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_50278785_50286067_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
WTC11_00030618	chr15	-	1969	16	NIC	ENSG00000138600.10	novel	7270	15	NA	NA	44	-129	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	31.4296392314997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCGAGATGTACTATAT	-50761506	True	NA	-18	True	AATAAA	-17	NA	50765662	50707576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
WTC11_00030619	chr15	-	741	3	FSM	ENSG00000273674.6	ENST00000655436.2	980	3	27	212	25	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAGTGAGGAGAAGG	-50908488	True	NA	NA	False	AATAAA	-18	NA	50908572	50882006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50882505_50890855_50891078_50908551
WTC11_00030620	chr15	-	1140	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	93	-5	-55	5	multi-exon	FALSE	canonical	1	2	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTTTTTTTTTTTAAC	-51751418	True	NA	-6	True	AATAAA	-19	NA	51751492	51723063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51723650_51724789_51725122_51751270
WTC11_00030621	chr15	-	1230	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5566	111	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	2.48746859276655	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACGATGTTAGAAAATTC	-51936009	True	NA	NA	False	AATAAA	-18	NA	51936193	51918961	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_51919144_51922715_51922909_51924039_51924179_51925744_51925880_51926777_51926873_51928208_51928294_51929332_51929479_51930528_51930624_51936033
WTC11_00030625	chr15	-	568	4	FSM	ENSG00000047346.13	ENST00000568668.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAACAGATAACCTCTT	NA	False	NA	NA	False	NA	NA	NA	52605191	52593416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52593737_52600126_52600236_52601085_52601166_52605132
WTC11_00030626	chr15	-	4260	2	FSM	ENSG00000169856.9	ENST00000305901.7	4352	2	0	92	0	-92	multi-exon	FALSE	canonical	1	3	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCTTACCAAATTCAATA	-52789341	True	NA	NA	False	NA	NA	NA	52790336	52755144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52757848_52788779
WTC11_00030627	chr15	-	1374	7	NNC	ENSG00000137876.11	novel	1889	6	NA	NA	0	10865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	936.380442626464	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCATTTCTGTGAGAAGA	-55179644	True	NA	NA	False	NA	NA	NA	55196902	55169940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_55169977_55181316_55182223_55183312_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
WTC11_00030628	chr15	-	1375	7	NNC	ENSG00000137876.11	novel	1889	6	NA	NA	0	10865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	743.978811675589	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCATTTCTGTGAGAAGA	-55179644	True	NA	NA	False	NA	NA	NA	55196902	55169940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_55169977_55181316_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
WTC11_00030631	chr15	-	353	1	FSM	ENSG00000277548.1	ENST00000618841.1	406	1	-123	176	-123	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCCTACAAAAAGATACT	NA	False	NA	NA	False	NA	NA	NA	55346875	55346522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55346500_55346900
WTC11_00030634	chr15	-	4494	21	FSM	ENSG00000137871.21	ENST00000559237.5	4902	21	413	-5	-96	0	multi-exon	FALSE	canonical	1	2	junction_19	17.1711968132684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	NA	False	NA	44	True	AATAAA	-18	NA	56733673	56630175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707262_56707307_56733457
WTC11_00030635	chr15	-	4025	17	FSM	ENSG00000137871.21	ENST00000560002.5	4040	17	12	3	12	-3	multi-exon	FALSE	canonical	1	3	junction_3	17.5311107391973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGCCTCAGGAATTA	NA	False	NA	NA	False	AATAAA	-11	NA	56707306	56652492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56654504_56658423_56658487_56666394_56666536_56666799_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262
WTC11_00030668	chr15	-	1410	10	NNC	ENSG00000174444.15	novel	2741	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	3502.50926277183	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	-66354058	True	NA	-23	True	AATAAA	-27	NA	66504833	66499319	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_66499653_66500055_66500173_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
WTC11_00030696	chr15	-	2306	6	NIC	ENSG00000159322.18	novel	2716	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	87.3260556764131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72780179	True	NA	-2	True	ATTAAA	-19	NA	72783731	72751368	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72752893_72755555_72755655_72760406_72760528_72771782_72771846_72774871_72775098_72783458
WTC11_00030707	chr15	-	2760	17	NIC	ENSG00000140474.14	novel	2674	17	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	71.5792556803296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCGCGTCTCTTCTTG	-74840972	True	NA	-5	True	ATTAAA	-11	NA	74843202	74836119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842538_74842675_74843003
WTC11_00030708	chr15	-	561	5	FSM	ENSG00000140474.14	ENST00000565373.5	561	5	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_4	105.307585196889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCCTCTACATGGCCC	-74842666	False	2230	NA	False	NA	NA	NA	74842676	74840586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842196_74842279_74842418_74842534
WTC11_00030727	chr15	-	1695	10	NNC	ENSG00000169371.14	novel	1931	10	NA	NA	0	15395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.983442800858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCCAGACTGGTTACAA	-75622337	True	NA	NA	False	NA	NA	NA	75625638	75582687	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_75582720_75598085_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
WTC11_00030729	chr15	-	1559	9	NIC	ENSG00000169371.14	novel	1420	9	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	133.216869708757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-75626423	False	NA	NA	False	AATATA	-17	NA	75626437	75598085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75626238
WTC11_00030736	chr15	-	12327	11	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.3556747727997	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAGACAAATGCTTG	-77420071	False	223	-11	True	AATAAA	-19	NA	77420294	77108163	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_77115320_77133004_77133751_77158502_77158697_77178789_77182041_77252366_77252527_77283882_77284031_77284957_77285079_77286422_77286505_77361314_77361432_77365162_77365226_77420005
WTC11_00030763	chr15	-	3234	8	NNC	ENSG00000225151.10	novel	2525	7	NA	NA	-114593	594	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	25.8338490183333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTAGCCTCTTCCCGGCTT	NA	False	NA	NA	False	NA	NA	NA	84344729	84198716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84344422
WTC11_00030764	chr15	-	2977	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	5	460	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	38.0927975408711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	-24	True	AATACA	-14	NA	84230085	84198850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229901
WTC11_00030771	chr15	-	3803	13	NIC	ENSG00000140538.16	novel	3826	14	NA	NA	2	-4	intron_retention	FALSE	canonical	2	10	junction_5	4.76969600708473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAATGACTGAATCAGA	-88255692	False	NA	NA	False	AATAAA	-14	NA	88256167	87977370	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_87979464_87981225_87981361_88032856_88033046_88126270_88126374_88127161_88127227_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
WTC11_00030774	chr15	-	1691	9	FSM	ENSG00000140545.15	ENST00000566497.5	1689	9	0	-2	0	0	multi-exon	FALSE	canonical	1	11	junction_1	327.769354882362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-88896559	True	NA	-35	True	NA	NA	NA	88913381	88898712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88899158_88899374_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
WTC11_00030777	chr15	-	3153	20	FSM	ENSG00000140521.17	ENST00000637264.1	3153	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	69.4840502633319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAAGACTCTATCT	-89329023	False	NA	-27	True	AATAAA	-6	NA	89329037	89316329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317477_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942
WTC11_00030786	chr15	-	2888	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	119.128169772449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986028	True	NA	-4	True	AATAAA	-30	NA	90994504	90966039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90967203_90969446_90969624_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00030788	chr15	-	4778	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	0	-1	intron_retention	FALSE	canonical	3	18	junction_9	129.60377652248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATAGTGTGGTGTTTCC	-90986061	True	NA	-5	True	AATAAA	-29	NA	90994537	90966040	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981747_90981982_90984017_90984141_90984692_90984826_90994406
WTC11_00030789	chr15	-	728	3	FSM	ENSG00000198901.14	ENST00000556972.6	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	134.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	-90970400	False	NA	-14	True	AATAAA	-20	NA	90970427	90966049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90966654_90969523_90969624_90970403
WTC11_00030792	chr15	-	2470	12	FSM	ENSG00000103852.13	ENST00000394135.7	2496	12	26	0	20	0	multi-exon	TRUE	canonical	2	2	junction_11	24.7696828821575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAGAAGAAAACGCTAAT	-99251049	True	NA	-40	True	NA	NA	NA	99251197	99137575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99249170_99249800_99251154
WTC11_00030795	chr15	-	4749	2	NIC	ENSG00000183060.16	novel	2710	3	NA	NA	0	49	intron_retention	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGGAGTGCAGTGGT	-99731497	True	NA	53	True	NA	NA	NA	99733437	99727351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_99732008_99733344
WTC11_00030797	chr15	-	421	2	FSM	ENSG00000131876.18	ENST00000560307.5	433	2	16	-4	16	0	multi-exon	FALSE	canonical	3	2734	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101285104	False	NA	-2	True	AATAAA	-22	NA	101285114	101281509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966
WTC11_00030799	chr15	+	212	1	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGTAAATAAAACAAGGA	NA	False	NA	NA	False	AATAAA	-34	NA	29731604	29731816	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_29731600_29731800
WTC11_00030800	chr15	+	215	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGAGATCCAGAACAGAA	36287888	False	NA	NA	False	AGTAAA	-9	NA	36287903	36288118	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36287900_36288100
WTC11_00030803	chr16	+	1087	5	FSM	ENSG00000161981.11	ENST00000293861.8	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	31.8040877875785	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGAGCTCACAGTGGCA	43427	True	NA	14	True	AATAAA	-25	NA	53827	57669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
WTC11_00030804	chr16	+	831	6	FSM	ENSG00000161981.11	ENST00000397876.6	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	450.564534778316	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCCTAGTCACA	43486	True	NA	-58	True	NA	NA	NA	53886	57372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_54059_55458_55550_55776_55883_56320_56421_56538_56614_57085
WTC11_00030805	chr16	+	831	6	NNC	ENSG00000161981.11	novel	831	6	NA	NA	0	48989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	379.467732488548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGGAACAATTCCTTT	43486	True	NA	NA	False	ATTAAA	-27	NA	53886	106658	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085_57442_106627
WTC11_00030806	chr16	+	1883	4	FSM	ENSG00000161981.11	ENST00000466183.1	1130	4	-485	-268	-485	43	multi-exon	FALSE	canonical	3	940	junction_1	25.2498624858742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTCCAGCCTCAGCCT	54458	False	NA	57	True	NA	NA	NA	54474	57712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_55550_55776_55883_56538_56614_57085
WTC11_00030808	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	28.7556757682529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	68922	True	NA	28	True	AATAAA	-19	NA	78224	85846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78334_79424_79701_83051_83257_85400
WTC11_00030809	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	265.263548193113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	68954	True	NA	24	True	AATAAA	-15	NA	78256	85842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
WTC11_00030810	chr16	+	597	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	8	junction_2	3	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176644	True	NA	NA	False	AATAAA	-17	NA	176659	177522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_176812_176928_177134_177282
WTC11_00030811	chr16	+	547	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	68	junction_2	8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	179953	True	NA	10	True	AGTAAA	-17	NA	180439	181179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_180582_180665_180871_180979
WTC11_00030812	chr16	+	617	1	FSM	ENSG00000206168.1	ENST00000382990.1	339	1	-339	61	-339	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAAACGTGGCGGGACC	NA	False	NA	NA	False	NA	NA	NA	230794	231411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_230800_231400
WTC11_00030813	chr16	+	3267	13	FSM	ENSG00000167930.17	ENST00000399932.8	2909	13	-358	0	-58	0	multi-exon	FALSE	canonical	3	536	junction_1	95.1506116054379	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	NA	False	NA	14	True	AATAAA	-23	NA	234462	266096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
WTC11_00030820	chr16	+	2951	13	NNC	ENSG00000167930.17	novel	2242	13	NA	NA	3631	0	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_1	296.797946140692	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGCGTCTGCCTGT	235458	False	NA	38	True	NA	NA	NA	243818	266120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_243901_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
WTC11_00030825	chr16	+	956	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	8	0	-8	multi-exon	FALSE	canonical	3	17	junction_1	1.72046505340853	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGGTGCCCTGGGTGTC	280559	True	NA	6	True	ATTAAA	-14	NA	280590	283002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
WTC11_00030826	chr16	+	514	2	ISM	ENSG00000236829.9	ENST00000457760.1	1044	3	-46	3813	7	-3804	5prime_fragment	FALSE	canonical	3	41	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTTCACGGAAGTGGCA	381739	True	NA	NA	False	NA	NA	NA	382103	383429	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_382478_383289
WTC11_00030828	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1196.79008184393	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	396418	True	NA	6	True	AGTAAA	-13	NA	396724	400746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
WTC11_00030829	chr16	+	1668	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	-16	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	1151.34888283265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGCCCAGCACATGG	370275	True	NA	6	True	ATTAAA	-3	NA	397191	400633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
WTC11_00030830	chr16	+	1193	6	FSM	ENSG00000103202.13	ENST00000620944.4	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	1308.57867933113	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	370275	True	NA	13	True	AGTAAA	-20	NA	397191	400753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
WTC11_00030831	chr16	+	1007	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	-7	0	0	0	multi-exon	FALSE	canonical	3	2194	junction_1	296.894762500116	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	370275	True	NA	14	True	AGTAAA	-21	NA	397191	400754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
WTC11_00030832	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	1135.95254632401	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	370320	True	NA	21	True	ATTAAA	-18	NA	397236	400648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
WTC11_00030833	chr16	+	1488	5	FSM	ENSG00000103202.13	ENST00000450036.1	985	5	-170	-333	-170	0	multi-exon	FALSE	canonical	3	37	junction_1	1192.07285326862	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTTCCATAACGTTGT	370655	False	NA	9	True	AGTAAA	-16	NA	397571	400749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_398180_398989_399124_399378_399481_399626_399740_400218
WTC11_00030834	chr16	+	376	4	FSM	ENSG00000242612.7	ENST00000627716.2	352	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	9	junction_3	59.4474557908074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGATCCGCCCACC	401812	False	NA	NA	False	NA	NA	NA	401833	406729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_402044_404955_405025_406345_406398_406684
WTC11_00030835	chr16	+	1650	10	NIC	ENSG00000242612.7	novel	1738	11	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_4	60.844062980705	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGCTAGTGCGTTTTC	401857	False	NA	6	True	CATAAA	-14	NA	401878	412370	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_402044_404955_405025_406345_406398_406684_406890_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
WTC11_00030837	chr16	+	1563	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	-12	0	7	multi-exon	FALSE	canonical	3	88	junction_3	26.2651741856017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTGTGTTTCCTTTCTG	401863	False	NA	16	True	ATTAAA	-28	NA	401884	412494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
WTC11_00030838	chr16	+	762	7	FSM	ENSG00000242612.7	ENST00000633348.1	762	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	54.8495416774126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTCTCAGGGAGCCC	401471	True	NA	NA	False	GGGGCT	-12	NA	401916	411076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407581_410208_410368_410690_410785_410971
WTC11_00030843	chr16	+	4801	14	FSM	ENSG00000090565.17	ENST00000262305.9	4801	14	0	0	0	0	multi-exon	TRUE	canonical	1	37	junction_3	28.1588898382567	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGTGCGCACCTATA	NA	False	NA	4	True	AATAAA	-13	NA	425648	523011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_496823_496860_503003_503098_505523_505628_510659_510801_518942_519025_519753_519892_520121_520278_520458_520600_520725
WTC11_00030844	chr16	+	5972	15	FSM	ENSG00000090565.17	ENST00000434585.5	3550	15	-730	-1692	0	1036	multi-exon	FALSE	canonical	1	29	junction_6	37.8873868409086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCAAGTTCCTCCTCCC	NA	False	NA	NA	False	AAAAAG	-36	NA	425648	524047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_491133_491269_496823_496860_503003_503098_505523_505628_510659_510801_518942_519025_519753_519892_520121_520278_520458_520600_520725
WTC11_00030845	chr16	+	1900	2	NNC	ENSG00000090565.17	novel	4801	14	NA	NA	13	-45067	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTTCTTGTGCGTGTCT	NA	False	NA	-5	True	AATAAA	-8	NA	425661	444034	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_426721_443193
WTC11_00030851	chr16	+	947	3	FSM	ENSG00000103326.12	ENST00000562370.5	942	3	-5	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGGTGGCCCCGGCCG	NA	False	NA	NA	False	NA	NA	NA	527711	547392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_528030_533945_533999_546816
WTC11_00030852	chr16	+	4888	14	FSM	ENSG00000103326.12	ENST00000219611.7	4888	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	64.4391369189866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	NA	False	NA	17	True	AATAAA	-18	NA	527711	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_528030_533945_533999_536028_536143_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
WTC11_00030853	chr16	+	3174	4	FSM	ENSG00000103326.12	ENST00000567216.5	3174	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	58.8614191696621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGACGTGATGCCGGGC	NA	False	NA	22	True	AATAAA	-14	NA	527747	539858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_528030_533945_533999_536028_536143_537133
WTC11_00030854	chr16	+	5017	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	62.58948623357	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	NA	False	NA	17	True	AATAAA	-18	NA	527747	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_540092_540372_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
WTC11_00030856	chr16	+	4754	13	NIC	ENSG00000103326.12	novel	4888	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_2	32.9528282380874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	NA	False	NA	17	True	AATAAA	-18	NA	527731	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
WTC11_00030859	chr16	+	6395	11	ISM	ENSG00000103326.12	ENST00000219611.7	4888	14	17113	0	4720	0	3prime_fragment	FALSE	canonical	3	161	junction_3	20.5983009008025	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	544807	False	NA	17	True	AATAAA	-18	NA	544824	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
WTC11_00030861	chr16	+	2192	3	FSM	ENSG00000161992.6	ENST00000409413.4	2245	3	31	22	31	-22	multi-exon	FALSE	canonical	3	5	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAACAGAAACTGTTCA	560354	True	NA	NA	False	NA	NA	NA	560424	565507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_560662_563255_564377_564673
WTC11_00030862	chr16	+	1289	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	62.4179461373089	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	569444	False	NA	NA	False	NA	NA	NA	569460	576257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_569796_574065_574764_575838_575971_576133
WTC11_00030865	chr16	+	3518	10	ISM	ENSG00000007541.17	ENST00000321878.10	2958	11	-13	26	-13	0	intron_retention	FALSE	canonical	3	61	junction_9	25.2146341987699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAACCTGCCCCGTG	567720	True	NA	-16	True	NA	NA	NA	569954	584083	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247
WTC11_00030866	chr16	+	2971	11	FSM	ENSG00000007541.17	ENST00000321878.10	2958	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	61	junction_9	25.8125938254953	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	567720	True	NA	10	True	AATAAA	-19	NA	569954	584109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
WTC11_00030867	chr16	+	2846	10	FSM	ENSG00000007541.17	ENST00000026218.9	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	23.1713957336824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	567783	True	NA	10	True	AATAAA	-19	NA	570017	584109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582882
WTC11_00030876	chr16	+	2732	7	FSM	ENSG00000197562.10	ENST00000535977.5	2717	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	7	junction_1	75.7055700284552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	589121	True	NA	30	True	AGTAAA	-22	NA	589341	629271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_589548_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
WTC11_00030877	chr16	+	2610	7	FSM	ENSG00000197562.10	ENST00000539661.5	2609	7	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	78.2206636524021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	589629	True	NA	30	True	AGTAAA	-22	NA	589667	629271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_589752_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
WTC11_00030879	chr16	+	2592	7	FSM	ENSG00000197562.10	ENST00000538492.5	2569	7	-23	0	-12	0	multi-exon	FALSE	canonical	3	81	junction_1	49.7113892606334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	590015	False	NA	30	True	AGTAAA	-22	NA	590053	629271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
WTC11_00030881	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	629792	True	NA	8	True	AATAAA	-21	NA	630984	634117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_631425_632581
WTC11_00030882	chr16	+	943	5	FSM	ENSG00000172366.20	ENST00000307650.9	931	5	-14	2	-14	-2	multi-exon	FALSE	canonical	3	386	junction_1	49.0433481728154	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGAGTGTCTTTGA	635697	True	NA	20	True	AATAAA	-13	NA	641813	648472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_642044_642119_642250_647416_647545_647782_647885_648119
WTC11_00030883	chr16	+	1068	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	-18	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	175.418813130177	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635711	True	NA	22	True	AATAAA	-15	NA	641827	648474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
WTC11_00030884	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.512733812295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	642362	False	NA	-15	True	GGGGCT	-5	NA	642450	648437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
WTC11_00030885	chr16	+	1594	4	FSM	ENSG00000172366.20	ENST00000620462.4	1594	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	201.660330478974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCTAATAAAGTGGAG	642464	False	NA	-6	True	GGGGCT	-14	NA	642482	648446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_643145_646471_646609_647416_647885_648119
WTC11_00030886	chr16	+	2306	3	FSM	ENSG00000172366.20	ENST00000619674.1	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	170.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	645107	False	NA	22	True	AATAAA	-15	NA	645125	648474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_646609_647416_647885_648119
WTC11_00030887	chr16	+	1728	1	FSM	ENSG00000172366.20	ENST00000575894.1	1728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	646728	False	NA	22	True	AATAAA	-15	NA	646746	648474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_646700_648500
WTC11_00030890	chr16	+	5486	26	FSM	ENSG00000161996.19	ENST00000552943.5	5498	26	12	0	-2	0	multi-exon	TRUE	canonical	3	17	junction_7	9.15204895091804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTGGTGGAGGACC	647295	True	NA	NA	False	NA	NA	NA	649322	661075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651823_652040_652466_652536_653340_653452_653524_653671_653745_655148_655306_655469_655572_655704_655772_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050
WTC11_00030891	chr16	+	5568	41	FSM	ENSG00000161996.19	ENST00000549091.5	5589	41	15	6	-13	-2	multi-exon	TRUE	canonical	2	8	junction_8	22.0758776722467	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	647312	True	NA	29	True	AATAAA	-15	NA	649339	667827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651826_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00030899	chr16	+	2145	6	NIC	ENSG00000161996.19	novel	1672	7	NA	NA	-365	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	35.5280171132587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	664612	False	NA	29	True	AATAAA	-15	NA	664622	667827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_665802_665949_666125_666219_666351_666454_666599_666672_666793_667431
WTC11_00030900	chr16	+	1672	7	FSM	ENSG00000161996.19	ENST00000547944.5	1672	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	13.4412301024373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTGCATTGTTGCAC	665173	False	NA	32	True	AATAAA	-18	NA	665183	667830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00030901	chr16	+	698	5	FSM	ENSG00000140983.14	ENST00000570092.5	674	5	-24	0	-5	0	multi-exon	FALSE	canonical	3	182	junction_2	450.273805589444	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGTCCTGCATCCCACA	643581	True	NA	NA	False	NA	NA	NA	668099	670507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668237_668352_668700_670122_670176_670248_670358_670455
WTC11_00030909	chr16	+	2493	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	-3	0	0	multi-exon	FALSE	canonical	3	637	junction_10	175.760569462487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	643613	True	NA	68	True	NA	NA	NA	668131	674174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00030910	chr16	+	2562	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	-3	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	294.246383590445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	643613	True	NA	68	True	NA	NA	NA	668131	674174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00030918	chr16	+	3100	11	FSM	ENSG00000140983.14	ENST00000568636.5	3098	11	-2	0	-2	0	multi-exon	FALSE	canonical	3	197	junction_2	332.480435514633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668637	False	NA	19	True	ATTAAA	-19	NA	668655	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668700_669552_670176_670265_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672182_672253_672826_672927_673131_673479
WTC11_00030924	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.70345075232981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	675631	False	NA	9	True	AATAAA	-15	NA	675670	678268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
WTC11_00030925	chr16	+	1566	6	FSM	ENSG00000103269.14	ENST00000450775.2	1566	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.08330601085553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGGGCTGTCCCGGGC	675682	False	NA	8	True	AATAAA	-14	NA	675721	678267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458
WTC11_00030926	chr16	+	1560	7	FSM	ENSG00000103266.11	ENST00000565677.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	454.75246624461	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACGTGCTGGTGTGT	679203	False	NA	24	True	AATAAA	-15	NA	680223	682746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681062_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
WTC11_00030927	chr16	+	914	4	FSM	ENSG00000103266.11	ENST00000563505.5	894	4	-20	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_1	43.4076286178158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAAGGTGAGTGTGT	674773	True	NA	NA	False	NA	NA	NA	680409	682066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681151_681351_681437_681604_681792
WTC11_00030928	chr16	+	757	6	FSM	ENSG00000103266.11	ENST00000567173.5	743	6	-14	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	469.770752601734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGCTTTGAGCTGA	674773	True	NA	NA	False	NA	NA	NA	680409	682193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681208_681351_681437_681604_681792_681881_682019_682077_682164
WTC11_00030929	chr16	+	2275	5	FSM	ENSG00000103266.11	ENST00000569248.5	1853	5	-338	-84	-143	0	multi-exon	FALSE	canonical	3	1211	junction_3	36.4031248658683	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	679060	True	NA	15	True	NA	NA	NA	680080	682801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_681351_681437_681604_681792_682077_682164_682282_682363
WTC11_00030930	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	63.7636695584214	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	674773	True	NA	15	True	NA	NA	NA	680409	682801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
WTC11_00030936	chr16	+	3976	1	FSM	ENSG00000261659.2	ENST00000575305.1	3413	1	-489	-74	-489	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGACACATGTTTTTA	688461	False	NA	NA	False	NA	NA	NA	688511	692487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_688500_692500
WTC11_00030937	chr16	+	3342	4	FSM	ENSG00000103260.9	ENST00000568223.7	3322	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	265	junction_1	25.8241919309954	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCATCTGTA	713456	True	NA	NA	False	AATAAA	-20	NA	715097	719655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_715394_715583_715985_716932_716993_717070
WTC11_00030938	chr16	+	503	4	FSM	ENSG00000103260.9	ENST00000570132.1	503	4	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	134.038137193197	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCACCTTCCTCTTCATG	713595	False	NA	NA	False	GGGGCT	-45	NA	715236	717247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_715394_715875_715985_716932_716993_717070
WTC11_00030940	chr16	+	806	2	FSM	ENSG00000103260.9	ENST00000564661.1	1174	2	-59	427	-59	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGCTGGGGAGGGGC	714726	False	NA	-85	True	NA	NA	NA	716367	717390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_716716_716932
WTC11_00030941	chr16	+	1626	3	FSM	ENSG00000103254.10	ENST00000566525.5	1686	3	60	0	60	0	multi-exon	FALSE	canonical	3	32	junction_2	104.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGACTCATGTTTTATG	720599	False	NA	16	True	GATAAA	-16	NA	720640	722589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721703_721800_722084_722308
WTC11_00030942	chr16	+	1088	4	FSM	ENSG00000103254.10	ENST00000564000.5	1088	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	28.3313724811677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATCCTGACTCATGTTT	721055	False	NA	12	True	GATAAA	-12	NA	721096	722585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722083
WTC11_00030944	chr16	+	806	4	FSM	ENSG00000103254.10	ENST00000219535.7	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	89.4514144972317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	719548	True	NA	0	True	NA	NA	NA	721141	722573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722308
WTC11_00030945	chr16	+	1370	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	-505	5	60	0	multi-exon	FALSE	canonical	3	179	junction_1	25.0798724079689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATCCTGACTCATGTTT	720599	False	NA	12	True	GATAAA	-12	NA	720640	722585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
WTC11_00030946	chr16	+	800	4	FSM	ENSG00000103254.10	ENST00000566437.1	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	87.6444838854993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTTCTGCCCCCATCC	721213	False	NA	-65	True	NA	NA	NA	721224	722508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_722084_722308
WTC11_00030947	chr16	+	1676	7	FSM	ENSG00000103253.19	ENST00000341413.8	1701	7	25	0	25	0	multi-exon	FALSE	canonical	2	9	junction_1	88.3221691058115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726836	False	NA	9	True	AATAAA	-14	NA	726982	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727141_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793
WTC11_00030948	chr16	+	1773	6	FSM	ENSG00000103253.19	ENST00000549114.5	1820	6	47	0	25	0	multi-exon	FALSE	canonical	2	9	junction_1	96.5973084511158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGGAGAGGAGCTGT	726836	False	NA	27	True	AATAAA	-32	NA	726982	729733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727141_727411_727615_727964_728030_728115_728234_728315_728605_728793
WTC11_00030949	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.4054503219269	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726874	True	NA	9	True	AATAAA	-14	NA	727105	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
WTC11_00030953	chr16	+	2199	3	FSM	ENSG00000103253.19	ENST00000567696.1	2199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726225	True	NA	9	True	AATAAA	-14	NA	727317	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_728030_728115_728896_729008
WTC11_00030955	chr16	+	1295	7	FSM	ENSG00000103253.19	ENST00000389701.9	1295	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	105.423616371707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726312	False	NA	9	True	AATAAA	-14	NA	727404	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727615_727964_728030_728115_728425_728503_728605_728793_728896_729008_729089_729287
WTC11_00030959	chr16	+	2069	2	FSM	ENSG00000103253.19	ENST00000569604.1	2162	2	80	13	80	-13	multi-exon	FALSE	canonical	3	9	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTGCTTCCTAT	731664	False	NA	-9	True	AGTAAA	-3	NA	733134	735512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_733160_733468
WTC11_00030960	chr16	+	475	3	FSM	ENSG00000127586.17	ENST00000570058.5	471	3	-4	0	0	0	multi-exon	TRUE	canonical	3	41	junction_2	199.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGGGGCCACGG	776820	True	NA	NA	False	NA	NA	NA	788619	789340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789216
WTC11_00030964	chr16	+	4509	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	-15	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	138.159328313364	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	776820	True	NA	21	True	TATAAA	-21	NA	788619	798072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00030965	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_8	111.130941541051	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776820	True	NA	23	True	TATAAA	-23	NA	788619	798074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00030966	chr16	+	3176	21	FSM	ENSG00000127586.17	ENST00000455171.6	3172	21	-4	0	0	0	multi-exon	FALSE	canonical	3	261	junction_7	113.525889117857	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776820	True	NA	23	True	TATAAA	-23	NA	788619	798074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00030968	chr16	+	568	4	FSM	ENSG00000127586.17	ENST00000484349.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	43.4383343245213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCCCTTGGGGGCCCC	789307	False	NA	NA	False	NA	NA	NA	789318	790549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_789716_790176_790270_790346_790400_790524
WTC11_00030971	chr16	+	2592	15	ISM	ENSG00000127586.17	ENST00000455171.6	3172	21	2078	0	3	0	3prime_fragment	FALSE	canonical	3	261	junction_1	121.477133146741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	790690	False	NA	23	True	TATAAA	-23	NA	790701	798074	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00030972	chr16	+	604	4	FSM	ENSG00000127586.17	ENST00000565787.1	607	4	0	3	0	-3	multi-exon	FALSE	canonical	3	78	junction_1	164.796844629987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGTGGAGCCCCAGGAGC	791125	False	NA	NA	False	NA	NA	NA	791136	792811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_791371_792223_792348_792438_792591_792717
WTC11_00030973	chr16	+	673	4	FSM	ENSG00000127586.17	ENST00000498439.1	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_1	36.6151152758894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	796598	False	NA	23	True	TATAAA	-23	NA	796614	798074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_796862_796960_797093_797693_797752_797838
WTC11_00030974	chr16	+	4511	2	FSM	ENSG00000005513.10	ENST00000566034.1	4153	2	-359	1	-43	-1	multi-exon	FALSE	canonical	3	104	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGGGCTGCATTTTGTG	981460	False	NA	13	True	ATTAAA	-17	NA	981726	986977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_983961_984700
WTC11_00030975	chr16	+	3139	3	FSM	ENSG00000005513.10	ENST00000293894.4	3087	3	-53	1	-53	0	multi-exon	FALSE	canonical	3	74	junction_1	15	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGGCTGCATTTTGTGT	981450	False	NA	14	True	ATTAAA	-18	NA	981716	986978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_982345_983727_983961_984700
WTC11_00030976	chr16	+	2609	1	FSM	ENSG00000162009.9	ENST00000293897.6	2629	1	16	4	16	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATTCTTTCCCCGAGC	1078805	False	NA	NA	False	AATAAA	-14	NA	1078841	1081450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1078800_1081400
WTC11_00030977	chr16	+	8198	34	FSM	ENSG00000196557.13	ENST00000358590.8	8069	34	-135	6	0	0	multi-exon	TRUE	canonical	0	0	junction_2	16.1750638496972	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACTTGGATTCCTGC	1152023	True	NA	NA	False	AATAAA	-17	NA	1153105	1221765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
WTC11_00030978	chr16	+	8219	35	FSM	ENSG00000196557.13	ENST00000348261.11	8219	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.1781828316596	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTGGATTCCTGCCAT	1152023	True	NA	NA	False	AATAAA	-20	NA	1153105	1221768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1212510_1212529_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
WTC11_00030979	chr16	+	7782	33	NIC	ENSG00000196557.13	novel	7815	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.4706122616398	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACTTGGATTCCTGC	1153723	False	NA	NA	False	AATAAA	-17	NA	1153737	1221765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1219002_1219131_1219980
WTC11_00030983	chr16	+	3285	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	-484	49	-1	0	multi-exon	FALSE	canonical	3	1635	junction_1	219.269240888913	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTAACCACTGTATCTA	1306612	True	NA	-35	True	AGTAAA	-14	NA	1309151	1326968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030984	chr16	+	2845	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	57	junction_1	749.829313910839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1309128	False	NA	15	True	ATTAAA	-15	NA	1309139	1327018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030985	chr16	+	2993	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	260	0	-13	0	multi-exon	FALSE	canonical	3	14	junction_1	765.464437812467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1309128	False	NA	15	True	ATTAAA	-15	NA	1309139	1327018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030986	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	889.361890024849	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1272406	True	NA	15	True	ATTAAA	-15	NA	1309634	1327018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030987	chr16	+	1098	7	FSM	ENSG00000103275.21	ENST00000566587.5	1098	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	768.738938493137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAATTGCCCGTTTC	1272574	False	NA	-23	True	NA	NA	NA	1309802	1324952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1310254_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030988	chr16	+	5821	7	FSM	ENSG00000103275.21	ENST00000562470.3	3131	7	-2690	0	-140	0	multi-exon	TRUE	canonical	3	88	junction_1	738.567852145097	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1306955	False	NA	14	True	ATTAAA	-14	NA	1309494	1327017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030989	chr16	+	3137	6	FSM	ENSG00000103275.21	ENST00000567074.6	3123	6	-14	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_2	181.985713725006	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTAACCACTGTATCTA	1313530	False	NA	-35	True	AGTAAA	-14	NA	1313545	1326968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
WTC11_00030990	chr16	+	3124	6	FSM	ENSG00000103275.21	ENST00000677314.1	3124	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	814.777613830915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTAACCACTGTATCTA	1313965	True	NA	-35	True	AGTAAA	-14	NA	1314030	1326968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1314097_1314292_1314377_1315653_1315727_1319701_1320284_1320437_1320518_1324729
WTC11_00030992	chr16	+	5436	3	FSM	ENSG00000103275.21	ENST00000677987.1	5436	3	0	0	0	0	multi-exon	FALSE	canonical	3	2016	junction_2	145.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTAACCACTGTATCTA	1317068	False	NA	-35	True	AGTAAA	-14	NA	1317166	1326968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1320284_1320437_1320518_1324729
WTC11_00030993	chr16	+	293	3	FSM	ENSG00000007516.14	ENST00000561602.1	622	3	329	0	-262	0	multi-exon	FALSE	canonical	3	17	junction_2	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGCCTGGCATGGCCAG	1345655	False	NA	NA	False	NA	NA	NA	1345746	1346225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1345891_1345985_1346079_1346169
WTC11_00030995	chr16	+	589	7	FSM	ENSG00000090581.11	ENST00000526820.5	572	7	-17	0	-17	0	multi-exon	FALSE	canonical	2	4	junction_3	162.649589267507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGGTGGGGCCTCAGA	1347953	True	NA	NA	False	NA	NA	NA	1351913	1362124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1357699_1357833_1361742_1361798_1361871_1361956_1362037
WTC11_00030996	chr16	+	2165	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	-190	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.7966096824469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTAAACCACCTACTATA	1347970	True	NA	NA	False	TTTAAA	-42	NA	1351930	1364303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
WTC11_00030998	chr16	+	416	3	FSM	ENSG00000090581.11	ENST00000534197.5	420	3	-8	12	0	-12	multi-exon	FALSE	canonical	2	4	junction_2	170	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACTACAGAGAGTTTG	1347979	True	NA	NA	False	NA	NA	NA	1351939	1357832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352307_1357699
WTC11_00030999	chr16	+	2328	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	-15	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	12.2030152112875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347970	True	NA	NA	False	GATAAA	-31	NA	1351930	1364387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
WTC11_00031000	chr16	+	3546	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	-6	-1355	3	5	multi-exon	FALSE	canonical	3	31	junction_3	104.269711994933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTAAGTTCACAGTA	1347973	True	NA	NA	False	AATAAA	-9	NA	1351933	1365742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
WTC11_00031002	chr16	+	2382	5	FSM	ENSG00000090581.11	ENST00000527076.1	2400	5	18	0	18	0	multi-exon	FALSE	canonical	3	339	junction_1	12.2551009787761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTGGGTTAAGAAAAT	1356680	False	NA	3	True	AGTAAA	-15	NA	1360640	1363350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1361956_1362037_1362132_1362205_1362743_1362824_1362907_1362996
WTC11_00031003	chr16	+	3333	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	-19	0	-3	0	multi-exon	TRUE	canonical	0	0	junction_7	77.2369082757719	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	1493323	False	NA	NA	False	AATAAA	-15	NA	1493340	1510454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
WTC11_00031008	chr16	+	1327	4	FSM	ENSG00000100726.15	ENST00000568240.1	1327	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	7.48331477354788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTTGGTGGCCGGT	1506520	False	NA	NA	False	AATAAA	-18	NA	1506533	1510457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1507052_1507305_1507371_1507600_1507717_1509829
WTC11_00031009	chr16	+	7941	21	FSM	ENSG00000007545.16	ENST00000397412.8	7972	21	29	2	29	0	multi-exon	FALSE	canonical	3	23	junction_15	8.97440805847383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTCGTTTGTGCCT	1610576	True	NA	10	True	CATAAA	-20	NA	1612388	1677906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1612658_1614638_1614986_1625972_1626167_1632211_1632366_1637823_1637908_1641138_1641188_1652495_1652582_1653032_1653157_1655218_1655301_1655876_1656993_1659885_1660064_1662489_1662672_1662760_1662836_1665056_1665139_1666072_1666178_1666421_1666601_1667334_1667401_1667961_1668194_1669000_1669166_1670663_1670810_1673880
WTC11_00031010	chr16	+	7827	20	NIC	ENSG00000007545.16	novel	7972	21	NA	NA	29	0	intron_retention	FALSE	canonical	3	23	junction_17	9.39941649629987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTCGTTTGTGCCT	1610576	True	NA	10	True	CATAAA	-20	NA	1612388	1677906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1612658_1614638_1614986_1625972_1626167_1632211_1632366_1637823_1637908_1641138_1641188_1652495_1652582_1653032_1653157_1655218_1655301_1655876_1656993_1659885_1660064_1662489_1662672_1662760_1662836_1665056_1665139_1666421_1666601_1667334_1667401_1667961_1668185_1669000_1669166_1670663_1670810_1673880
WTC11_00031011	chr16	+	550	5	FSM	ENSG00000007545.16	ENST00000415022.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	9.20258115965298	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGATGCGCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	1662604	1668108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1662672_1662760_1662836_1665056_1665139_1666421_1666601_1667961
WTC11_00031012	chr16	+	534	5	FSM	ENSG00000007545.16	ENST00000466562.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	10.8714074525794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGAGCAGGAGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	1662698	1667365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1662836_1665056_1665139_1666072_1666178_1666421_1666601_1667334
WTC11_00031013	chr16	+	367	3	FSM	ENSG00000007545.16	ENST00000467286.1	664	3	297	0	297	0	multi-exon	FALSE	canonical	3	23	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAGCAAAGCAGCTG	NA	False	NA	NA	False	NA	NA	NA	1666072	1667417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1666178_1666421_1666601_1667334
WTC11_00031014	chr16	+	456	2	FSM	ENSG00000007545.16	ENST00000468839.1	451	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCTGTTTGATGGTGG	NA	False	NA	NA	False	NA	NA	NA	1670461	1673988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1670810_1673880
WTC11_00031015	chr16	+	3769	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	-74	0	-51	0	multi-exon	FALSE	canonical	3	1014	junction_4	39.2460189063808	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	1678140	False	NA	24	True	AATAAA	-32	NA	1678204	1702086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
WTC11_00031016	chr16	+	3206	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	-21	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	486.775759462198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	1654975	True	NA	85	True	NA	NA	NA	1678255	1701490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
WTC11_00031019	chr16	+	2182	1	FSM	ENSG00000278987.1	ENST00000624137.1	2182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAATTTACAAAATGTA	1688215	False	NA	NA	False	AATAAA	-18	NA	1688354	1690536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1688400_1690500
WTC11_00031020	chr16	+	1261	4	ISM	ENSG00000138834.15	ENST00000564098.5	4436	5	-63	16994	-5	497	5prime_fragment	FALSE	canonical	3	75	junction_2	5.55777733351102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAATTAGCTAAGCA	1703881	True	NA	NA	False	NA	NA	NA	1706177	1730075	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486
WTC11_00031021	chr16	+	4471	31	FSM	ENSG00000138834.15	ENST00000356010.9	4456	31	-15	0	-5	0	multi-exon	FALSE	canonical	2	21	junction_5	33.753024555833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTCTACCCTGGGCC	1703881	True	NA	NA	False	NA	NA	NA	1706177	1769140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
WTC11_00031027	chr16	+	3684	15	ISM	ENSG00000138834.15	ENST00000250894.8	5661	32	57739	-9	0	9	3prime_fragment	FALSE	canonical	3	98	junction_4	13.8698395441184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGGCCCAAATCGAAAC	1763251	True	NA	24	True	AATAAA	-25	NA	1763921	1770326	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
WTC11_00031032	chr16	+	6934	7	FSM	ENSG00000197774.14	ENST00000570069.5	5613	7	-173	-1148	-173	67	multi-exon	FALSE	canonical	2	4	junction_1	6.61857655055493	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCTGTCCCGCAGGC	1773136	False	NA	84	True	NA	NA	NA	1773152	1781775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1773475_1773704_1773842_1774259_1774353_1775040_1775409_1775568_1775685_1775796_1775987_1776067
WTC11_00031034	chr16	+	1177	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	177	junction_2	207.513854959133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	1771769	True	NA	11	True	ATTAAA	-20	NA	1782927	1789181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
WTC11_00031035	chr16	+	2200	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	541	junction_1	74.5800744166966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	1771769	True	NA	13	True	ATTAAA	-22	NA	1782927	1789183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
WTC11_00031036	chr16	+	478	4	FSM	ENSG00000095906.17	ENST00000563136.5	470	4	-8	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	231.361669734254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCGGGGACCTCCGATG	1771801	True	NA	NA	False	NA	NA	NA	1782959	1787740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786737_1786956_1787676
WTC11_00031037	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	113.598342124053	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1771801	True	NA	16	True	ATTAAA	-25	NA	1782959	1789186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
WTC11_00031038	chr16	+	839	6	FSM	ENSG00000095906.17	ENST00000568287.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	282.078428810145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGGGAATCGTGGAGAA	1771836	True	NA	NA	False	NA	NA	NA	1782994	1788000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1785638_1785903_1786536_1786656_1786756_1786956_1787676_1787832_1787940
WTC11_00031039	chr16	+	832	6	FSM	ENSG00000095906.17	ENST00000565134.5	815	6	-17	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	116.460465394914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGACTTCATCCAGGAG	1771831	True	NA	NA	False	NA	NA	NA	1782989	1788613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788208_1788568
WTC11_00031045	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	1826715	True	NA	11	True	AATAAA	-20	NA	1826940	1828914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1826900_1828900
WTC11_00031046	chr16	+	689	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	-59	-135	-39	0	multi-exon	FALSE	canonical	3	45	junction_3	1245.5982052367	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	NA	False	NA	25	True	TATAAA	-14	NA	1959498	1961975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
WTC11_00031047	chr16	+	964	2	FSM	ENSG00000140990.15	ENST00000565031.1	958	2	-6	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGGCAGCTGTGGGT	1920771	True	NA	-51	True	NA	NA	NA	1959537	1961899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152
WTC11_00031048	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2271	junction_3	200.769076857524	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
WTC11_00031049	chr16	+	835	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	-5	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	56.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496
WTC11_00031050	chr16	+	319	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	16	0	16	0	multi-exon	FALSE	canonical	3	499	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	1964904	False	NA	15	True	AATAAA	-20	NA	1964914	1965509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1965130_1965405
WTC11_00031051	chr16	+	471	1	FSM	ENSG00000255198.5	ENST00000564014.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	1964368	True	NA	10	True	AATAAA	-15	NA	1965033	1965504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1965000_1965500
WTC11_00031052	chr16	+	6801	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	-18	0	-18	0	multi-exon	FALSE	canonical	3	496	junction_10	34.6318506488619	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	1966817	True	NA	NA	False	NA	NA	NA	1972034	1982929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
WTC11_00031056	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	17.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	1977716	True	NA	30	True	AATAAA	-20	NA	1984192	1987749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1984477_1984746_1984944_1985865
WTC11_00031059	chr16	+	2047	4	FSM	ENSG00000127561.16	ENST00000248121.7	2026	4	-21	0	-21	0	multi-exon	TRUE	canonical	3	126	junction_1	157.404644855932	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGACGCTCCTGGAATCA	1989366	True	NA	16	True	AATAAA	-24	NA	1989948	1994275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1990202_1991973_1992212_1992635_1992779_1992862
WTC11_00031061	chr16	+	1707	2	FSM	ENSG00000127561.16	ENST00000564642.1	752	2	23	-978	23	1	multi-exon	FALSE	canonical	3	469	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACGCTCCTGGAATCAT	1990150	True	NA	17	True	AATAAA	-25	NA	1992485	1994276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1992779_1992862
WTC11_00031062	chr16	+	751	2	FSM	ENSG00000183971.10	ENST00000566435.4	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCGTCTGCTTGTGTA	2017092	True	NA	18	True	AATAAA	-32	NA	2019784	2020755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2020313_2020532
WTC11_00031063	chr16	+	2160	7	FSM	ENSG00000065054.14	ENST00000424542.7	2160	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	28.014381227426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACGCCTCTGTCTTTT	2024595	True	NA	10	True	GATAAA	-17	NA	2026901	2039026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
WTC11_00031067	chr16	+	5558	41	FSM	ENSG00000103197.18	ENST00000350773.9	5538	41	-37	17	0	0	multi-exon	FALSE	canonical	3	31	junction_26	47.292150511475	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTGCAGTCAGACAG	2043153	True	NA	19	True	AATAAA	-34	NA	2047982	2088701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031069	chr16	+	5448	40	FSM	ENSG00000103197.18	ENST00000401874.7	5437	40	-11	0	0	0	multi-exon	FALSE	canonical	3	67	junction_25	41.298690706164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	2043148	True	NA	36	True	NA	NA	NA	2047977	2088718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031070	chr16	+	6417	42	FSM	ENSG00000103197.18	ENST00000219476.9	6415	42	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_31	57.283103581934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATACTGCTGTGTC	2043153	True	NA	NA	False	AATAAA	-23	NA	2047982	2089491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2082435_2082505_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031073	chr16	+	5309	39	FSM	ENSG00000103197.18	ENST00000439673.6	5287	39	-22	0	3	0	multi-exon	FALSE	canonical	2	5	junction_3	49.5949591420254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTGCAGTCAGACAG	2043162	True	NA	19	True	AATAAA	-34	NA	2047991	2088701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031075	chr16	+	5409	40	FSM	ENSG00000103197.18	ENST00000642797.1	5388	40	-21	0	0	0	multi-exon	FALSE	canonical	3	47	junction_25	42.572983318212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	2043190	True	NA	36	True	NA	NA	NA	2048019	2088718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031076	chr16	+	5445	40	FSM	ENSG00000103197.18	ENST00000644399.1	5445	40	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_25	47.7601805429626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGACAGCTCTTTTAT	2048607	False	NA	28	True	AATAAA	-43	NA	2048622	2088710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031085	chr16	+	2710	13	FSM	ENSG00000103197.18	ENST00000646674.1	2710	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	66.0561104079117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTGCCTGTCAGTGAAA	NA	False	NA	-38	True	NA	NA	NA	2079657	2088644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2079670_2080164_2080378_2081594_2082505_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031088	chr16	+	4140	10	FSM	ENSG00000103197.18	ENST00000569930.2	3388	10	0	-752	0	0	multi-exon	FALSE	canonical	3	167	junction_1	30.0275593578242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGGACTCGGGGAA	NA	False	NA	NA	False	NA	NA	NA	2081929	2089444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00031089	chr16	+	600	3	FSM	ENSG00000259933.6	ENST00000570072.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6	1590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTTCAGGAG	2091342	True	NA	NA	False	GATAAA	-36	NA	2091435	2095017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2091615_2092888_2093013_2094720
WTC11_00031090	chr16	+	1728	8	FSM	ENSG00000167964.13	ENST00000562735.5	1720	8	-8	0	-8	0	multi-exon	TRUE	canonical	3	30	junction_2	4.83608882280307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGTGAATAAAGTTGT	2148492	True	NA	-24	True	NA	NA	NA	2148615	2154110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153223_2153318
WTC11_00031092	chr16	+	699	6	FSM	ENSG00000167964.13	ENST00000561600.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.27636238330917	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCGAGGGGCCTCCTGC	2149858	False	NA	NA	False	NA	NA	NA	2149981	2153389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988
WTC11_00031093	chr16	+	816	4	FSM	ENSG00000131653.13	ENST00000565383.5	799	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	36	junction_2	479.068772608786	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCTGGGTAGGGAA	2146434	True	NA	10	True	AATAAA	-21	NA	2155680	2168515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2155859_2163882_2164002_2165856_2165937_2168076
WTC11_00031094	chr16	+	3687	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	-4	0	0	0	multi-exon	TRUE	canonical	3	969	junction_5	92.2297538758507	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	2146531	True	NA	15	True	AATAAA	-21	NA	2155777	2178129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
WTC11_00031099	chr16	+	1915	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	-240	-272	10	0	multi-exon	FALSE	canonical	3	226	junction_1	148.199121427344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	2205159	True	NA	-19	True	GGGGCT	-9	NA	2205213	2209370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00031100	chr16	+	1832	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	45	-16	-3	0	multi-exon	FALSE	canonical	3	125	junction_1	170.90768707112	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTCGATGCAGAGAT	2205167	False	NA	-12	True	AATAAA	-32	NA	2205221	2209412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00031101	chr16	+	1752	8	FSM	ENSG00000167965.18	ENST00000301724.14	1735	8	-17	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	145.607523914145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTCGATGCAGAGAT	2199289	True	NA	-12	True	AATAAA	-32	NA	2205476	2209412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449
WTC11_00031115	chr16	+	1701	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	-10	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	127.60485884166	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2203721	True	NA	8	True	AATAAA	-17	NA	2205730	2209397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00031117	chr16	+	1677	9	NIC	ENSG00000167965.18	novel	1691	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	215.283388815765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTCGATGCAGAGATAAA	2203759	False	NA	-9	True	AATAAA	-35	NA	2205768	2209415	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207196_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00031119	chr16	+	2569	14	NNC	ENSG00000167967.16	novel	2548	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	38.7247913804015	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGATGTTGTGGCAG	2222112	True	NA	14	True	AATAAA	-15	NA	2223565	2235741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233884_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
WTC11_00031121	chr16	+	2568	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	-20	0	-9	0	multi-exon	FALSE	canonical	3	100	junction_8	28.1872437471132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222117	True	NA	15	True	AATAAA	-16	NA	2223570	2235742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
WTC11_00031128	chr16	+	844	3	FSM	ENSG00000260778.5	ENST00000562838.1	535	3	-36	-273	4	-21	multi-exon	FALSE	canonical	1	1	junction_1	23.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAACTTCTTTTTCA	2268249	False	NA	-17	True	NA	NA	NA	2268626	2273397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2268844_2271675_2271892_2272986
WTC11_00031129	chr16	+	4280	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	-53	3	0	0	multi-exon	FALSE	canonical	3	399	junction_1	32.8718510849328	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGAGTGATGGACGTC	2424674	True	NA	27	True	ATTAAA	-17	NA	2429393	2458851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
WTC11_00031132	chr16	+	929	7	FSM	ENSG00000162062.15	ENST00000567489.5	907	7	-22	0	-14	0	multi-exon	FALSE	canonical	3	20	junction_1	83.2899887274709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGCAGGTGAGACCCCG	2460060	False	NA	NA	False	GGGGCT	-42	NA	2460071	2462723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630
WTC11_00031133	chr16	+	1930	9	FSM	ENSG00000162062.15	ENST00000569496.5	1911	9	-19	0	-19	0	multi-exon	FALSE	canonical	3	148	junction_1	35.5824307067407	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTTGTGTGATATTAA	2460055	False	NA	-20	True	NA	NA	NA	2460066	2464926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
WTC11_00031136	chr16	+	1537	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	74.7394432344796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGTGTTTATTTATG	2456224	True	NA	13	True	ATTAAA	-13	NA	2460101	2464959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
WTC11_00031137	chr16	+	2180	8	FSM	ENSG00000162062.15	ENST00000569994.5	2156	8	-24	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.1271742009934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456216	True	NA	16	True	ATTAAA	-16	NA	2460093	2464962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
WTC11_00031138	chr16	+	1648	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	-15	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	37.0618435444539	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456216	True	NA	17	True	ATTAAA	-17	NA	2460093	2464963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
WTC11_00031141	chr16	+	1683	9	FSM	ENSG00000162062.15	ENST00000483320.5	1709	9	-11	37	0	0	multi-exon	FALSE	canonical	3	174	junction_8	29.0729148005493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTTGTGTGATATTAA	2456256	True	NA	-20	True	NA	NA	NA	2460133	2464926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
WTC11_00031143	chr16	+	6651	7	FSM	ENSG00000162065.14	ENST00000567020.6	6673	7	22	0	22	0	multi-exon	FALSE	canonical	3	22	junction_3	3.34995854037363	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGAAATAACTTGC	2475051	False	NA	21	True	AATAAA	-22	NA	2475072	2505734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803
WTC11_00031144	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_1	27	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	2497202	True	NA	23	True	AATAAA	-15	NA	2513951	2520218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2514183_2519217_2519402_2519540
WTC11_00031145	chr16	+	1342	1	FSM	ENSG00000279520.1	ENST00000624099.1	1342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATCCGCCCGCCTTGG	2516640	False	NA	NA	False	NA	NA	NA	2516657	2517999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2516700_2518000
WTC11_00031146	chr16	+	3964	2	FSM	ENSG00000185883.12_ENSG00000279520.1	ENST00000564973.1	1081	2	-2883	0	-542	0	multi-exon	FALSE	canonical	3	1536	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	2516098	False	NA	23	True	AATAAA	-15	NA	2516115	2520218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2519402_2519540
WTC11_00031147	chr16	+	3312	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	-44	5	-36	0	multi-exon	TRUE	canonical	3	132	junction_4	19.5448202856921	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2520093	False	NA	26	True	AATACA	-22	NA	2520320	2531417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
WTC11_00031148	chr16	+	3968	8	ISM	ENSG00000162066.16	ENST00000302956.8	3273	10	-44	3	-36	2	intron_retention	FALSE	canonical	3	132	junction_4	18.581316049259	3713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGTTCTGTGACATGA	2520093	False	NA	28	True	AATACA	-24	NA	2520320	2531419	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451
WTC11_00031149	chr16	+	3193	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	-21	0	-7	0	multi-exon	FALSE	canonical	3	103	junction_8	26.6915717034423	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2520122	False	NA	26	True	AATACA	-22	NA	2520349	2531417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
WTC11_00031159	chr16	+	552	4	FSM	ENSG00000140992.19	ENST00000492021.6	552	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22.3954360429878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTCCAGAGAATATGCG	2536732	True	NA	NA	False	NA	NA	NA	2538020	2561501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2538137_2538618_2538772_2557702_2557964_2561479
WTC11_00031160	chr16	+	1125	3	FSM	ENSG00000140992.19	ENST00000570136.5	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGTGGAAGTTGGGGTGG	2536732	True	NA	NA	False	ATTAAA	-29	NA	2538020	2562227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2538137_2557702_2557964_2561479
WTC11_00031161	chr16	+	7202	14	FSM	ENSG00000140992.19	ENST00000342085.9	7184	14	-18	0	0	0	multi-exon	TRUE	canonical	3	43	junction_11	7.26424330327879	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	2536714	True	NA	4	True	AATAAA	-17	NA	2538002	2603188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
WTC11_00031163	chr16	+	2155	9	FSM	ENSG00000140992.19	ENST00000491073.5	2387	9	0	232	0	-155	multi-exon	FALSE	canonical	3	44	junction_5	8.15092019345055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAGAACCGGACGCC	NA	False	NA	NA	False	NA	NA	NA	2556895	2583832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411
WTC11_00031165	chr16	+	2791	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	95	-138	25	138	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTCCTGCTATCAAAA	2601239	True	NA	NA	False	NA	NA	NA	2603444	2630632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
WTC11_00031167	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	26.8894031172133	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	2675632	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
WTC11_00031168	chr16	+	1158	10	FSM	ENSG00000167978.17	ENST00000575009.5	1146	10	-12	0	0	0	multi-exon	TRUE	canonical	3	367	junction_1	455.20837719298	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGAGGCCTCTCCAAC	2752530	False	NA	NA	False	NA	NA	NA	2752625	2761707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560
WTC11_00031170	chr16	+	9056	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	-12	0	0	0	multi-exon	FALSE	canonical	3	146	junction_12	682.157157666107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	2752530	False	NA	17	True	AATAAA	-18	NA	2752625	2771412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
WTC11_00031173	chr16	+	9288	16	NIC	ENSG00000167978.17	novel	9044	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_13	755.634361903222	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2717012	True	NA	15	True	AATAAA	-16	NA	2752661	2771410	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2752855_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2759746_2760009_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
WTC11_00031174	chr16	+	8706	15	NNC	ENSG00000167978.17	novel	9044	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	769.90562965303	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2717012	True	NA	15	True	AATAAA	-16	NA	2752661	2771410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469_2758548_2758987_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2762337_2762369_2768262_2768996_2769285_2770351_2770466_2770606_2770718_2770857
WTC11_00031185	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	33	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2769346	False	NA	15	True	AATAAA	-16	NA	2769373	2771410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2770466_2770603_2770718_2770857
WTC11_00031186	chr16	+	638	4	FSM	ENSG00000167978.17	ENST00000574866.1	638	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	98.0555398174366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCCGTGGGAGGGTCCT	2769884	False	NA	NA	False	NA	NA	NA	2769894	2770934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2770228_2770351_2770466_2770603_2770718_2770857
WTC11_00031187	chr16	+	554	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	89	2607	89	-2607	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAAGTTACATTTACAT	2777106	True	NA	NA	False	NA	NA	NA	2777407	2777961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2777400_2778000
WTC11_00031188	chr16	+	992	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	-2	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2880921	True	NA	16	True	AATAAA	-26	NA	2883212	2899365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
WTC11_00031189	chr16	+	5040	10	FSM	ENSG00000059122.17	ENST00000253928.14	5043	10	3	0	3	0	multi-exon	FALSE	canonical	3	75	junction_3	10.2173901622868	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAAGAACTCTAAGTT	2910725	True	NA	NA	False	AATAAA	-23	NA	2911933	2951208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930409_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
WTC11_00031190	chr16	+	4963	10	FSM	ENSG00000059122.17	ENST00000416288.6	4963	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	20.4613456709637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACGTATCAACTAAGAA	2910790	True	NA	NA	False	AATAAA	-14	NA	2911998	2951199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930412_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
WTC11_00031193	chr16	+	1468	6	FSM	ENSG00000059122.17	ENST00000573564.5	1470	6	0	2	0	-2	multi-exon	FALSE	canonical	3	86	junction_2	9.49947366963033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTCTCAGCTTTT	NA	False	NA	NA	False	AAAACA	-6	NA	2930796	2940161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031
WTC11_00031194	chr16	+	3905	5	FSM	ENSG00000059122.17	ENST00000570752.5	3721	5	-186	2	-186	0	multi-exon	FALSE	canonical	2	2	junction_1	41.9225476325092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTGGAGCTGGTACTT	NA	False	NA	14	True	AATAAA	-17	NA	2934694	2949811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2936878_2937120_2937385_2938183_2938457_2940031_2940093_2948687
WTC11_00031196	chr16	+	2339	7	FSM	ENSG00000131650.14	ENST00000572045.5	2339	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	4.42530601578392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	2964173	False	NA	4	True	AATAAA	-16	NA	2964215	2968380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319
WTC11_00031197	chr16	+	1995	9	FSM	ENSG00000131650.14	ENST00000303746.10	1995	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	5.71046189025021	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	2964070	True	NA	4	True	AATAAA	-16	NA	2964274	2968380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
WTC11_00031198	chr16	+	1882	8	FSM	ENSG00000131650.14	ENST00000319500.10	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	9.81876587282262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGAAAGTTCTTCCGTG	2964289	True	NA	7	True	AATAAA	-19	NA	2964311	2968383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967809
WTC11_00031200	chr16	+	2761	3	FSM	ENSG00000162073.14	ENST00000318782.9	2685	3	-78	2	0	0	multi-exon	FALSE	canonical	3	69	junction_1	24	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	2967586	True	NA	10	True	AATAAA	-15	NA	2969269	2973482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2969841_2971156_2971379_2971514
WTC11_00031202	chr16	+	3188	2	FSM	ENSG00000162073.14	ENST00000574988.1	869	2	-724	-1595	696	93	multi-exon	FALSE	canonical	3	117	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCCTGAGCGTGTGG	2970243	False	NA	105	True	GGGGCT	-22	NA	2970253	2973577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2971379_2971514
WTC11_00031203	chr16	+	1632	2	Fusion	ENSG00000272079.2_ENSG00000289281.1	novel	727	2	NA	NA	60	-225	intron_retention	FALSE	canonical	3	25	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGGCCAGGTGCCCATT	3003864	True	NA	NA	False	AATAAA	-25	NA	3004191	3007163	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_3004880_3006219
WTC11_00031204	chr16	+	1515	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	19	49	19	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAACATCCCCACCCTCG	3012873	True	NA	NA	False	NA	NA	NA	3012941	3014456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3012900_3014500
WTC11_00031206	chr16	+	1512	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	-632	1	-632	-1	multi-exon	FALSE	canonical	3	83	junction_1	766.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGGAGAGGCAGTGA	3019688	False	NA	17	True	AATAAA	-18	NA	3019726	3022382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3020492_3021554_3021690_3021770
WTC11_00031207	chr16	+	1061	4	FSM	ENSG00000006327.14	ENST00000574699.1	583	4	-61	-417	-52	-3	multi-exon	FALSE	canonical	2	5	junction_1	772.970173350103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTTGGAGAGGCAGT	3010310	True	NA	15	True	AATAAA	-16	NA	3020306	3022380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3020492_3021188_3021320_3021554_3021690_3021770
WTC11_00031208	chr16	+	986	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	-9	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	109.42374310704	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010362	True	NA	18	True	AATAAA	-19	NA	3020358	3022383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
WTC11_00031209	chr16	+	2340	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	-663	1	-632	-1	multi-exon	FALSE	canonical	3	1616	junction_2	28	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGGAGAGGCAGTGA	3019688	False	NA	17	True	AATAAA	-18	NA	3019726	3022382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3021320_3021554_3021690_3021770
WTC11_00031210	chr16	+	1147	2	FSM	ENSG00000131652.14	ENST00000574957.1	1143	2	-4	0	0	0	multi-exon	FALSE	canonical	3	987	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCCCTCATCCTGGC	3017966	True	NA	NA	False	NA	NA	NA	3024026	3026515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707
WTC11_00031212	chr16	+	960	7	FSM	ENSG00000131652.14	ENST00000576143.5	960	7	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	43.7099022597346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGGTGGCTGGTTGG	3017966	True	NA	NA	False	NA	NA	NA	3024026	3026781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707_3025824_3025923_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678
WTC11_00031213	chr16	+	1419	13	FSM	ENSG00000131652.14	ENST00000326266.13	1411	13	-8	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	49.1579088245218	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTCTTTCTTTCTATG	3017966	True	NA	59	True	AATAAA	-17	NA	3024026	3027750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
WTC11_00031214	chr16	+	1314	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	-14	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	318.157472825632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	3017966	True	NA	64	True	AATAAA	-22	NA	3024026	3027755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
WTC11_00031217	chr16	+	1383	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	-23	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	247.355625680023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	3017970	True	NA	31	True	NA	NA	NA	3024030	3027722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
WTC11_00031220	chr16	+	3674	10	FSM	ENSG00000008516.18	ENST00000336577.9	3674	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	6.68331255192114	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCATTCTTCTGAGC	3043675	True	NA	15	True	AATAAA	-17	NA	3046560	3060726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3047017_3047414_3047548_3050008_3050145_3050253_3050547_3057032_3057210_3057309_3057395_3057530_3057614_3058180_3058334_3058411_3058670_3058826
WTC11_00031221	chr16	+	482	4	FSM	ENSG00000008516.18	ENST00000570755.1	779	4	0	297	0	-297	multi-exon	FALSE	canonical	0	0	junction_3	43.2229362980145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCGGTTGATGAGGAGCT	3047519	False	NA	NA	False	NA	NA	NA	3047530	3055865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3047548_3050008_3050145_3050253_3050547_3055829
WTC11_00031222	chr16	+	720	4	FSM	ENSG00000008516.18	ENST00000575441.1	710	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	88	junction_3	5.35412613473634	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGCCGAATCCTCCTC	3056772	False	NA	NA	False	GGGGCT	-45	NA	3056783	3058306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3057210_3057309_3057395_3057530_3057614_3058180
WTC11_00031223	chr16	+	939	6	FSM	ENSG00000008517.19	ENST00000526464.6	1198	6	259	0	-3	0	multi-exon	FALSE	canonical	2	10	junction_2	3.72021504754765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGATCGCGGAGGTGG	3065478	True	NA	15	True	AATAAA	-30	NA	3065627	3069543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
WTC11_00031224	chr16	+	988	6	FSM	ENSG00000008517.19	ENST00000396890.6	1067	6	-11	90	-3	-1	multi-exon	FALSE	canonical	3	10	junction_1	3.72021504754765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCGGAGGTGGGTTTCCC	3065478	True	NA	22	True	AATAAA	-37	NA	3065627	3069550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065688_3065783_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
WTC11_00031226	chr16	+	2312	7	FSM	ENSG00000122386.11	ENST00000620094.4	2309	7	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_1	21.202725191719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCCGCCTACACAGCT	3111336	True	NA	10	True	ATTAAA	-14	NA	3112575	3120515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112951_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
WTC11_00031227	chr16	+	1978	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	-10	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_1	15.1152976226809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111336	True	NA	12	True	ATTAAA	-16	NA	3112575	3120517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
WTC11_00031232	chr16	+	3282	6	FSM	ENSG00000085644.14	ENST00000396878.8	3311	6	29	0	29	0	multi-exon	FALSE	canonical	3	31	junction_1	4.83321838943783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	3134631	True	NA	12	True	AATAAA	-13	NA	3135057	3142804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3135388_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
WTC11_00031234	chr16	+	3266	6	FSM	ENSG00000085644.14	ENST00000576863.1	3245	6	-21	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	11.5238882327103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	3134711	True	NA	12	True	AATAAA	-13	NA	3135137	3142804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3135388_3137165_3137680_3138353_3138542_3138744_3138819_3138974_3139099_3140688
WTC11_00031236	chr16	+	1657	3	FSM	ENSG00000006194.10	ENST00000573578.1	1636	3	-21	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGTGTGTACATTA	3281541	True	NA	NA	False	AATAAA	-25	NA	3283484	3286884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3285680_3285755_3286022
WTC11_00031237	chr16	+	1583	2	FSM	ENSG00000006194.10	ENST00000572748.1	759	2	0	-824	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGTGTGTACATTA	3281541	True	NA	NA	False	AATAAA	-25	NA	3283484	3286884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3286022
WTC11_00031238	chr16	+	3378	6	FSM	ENSG00000006194.10	ENST00000219069.6	3282	6	-96	0	-90	0	multi-exon	FALSE	canonical	3	40	junction_1	21.7770521421059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281451	True	NA	NA	False	AATAAA	-20	NA	3283394	3291460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3288453_3288571_3289392
WTC11_00031239	chr16	+	3317	2	FSM	ENSG00000006194.10	ENST00000574253.1	1139	2	-553	-1625	-528	0	multi-exon	FALSE	canonical	3	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3282933	True	NA	NA	False	AATAAA	-20	NA	3282956	3291460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3289392
WTC11_00031240	chr16	+	6651	12	Fusion	ENSG00000006194.10_ENSG00000162086.16	novel	3282	6	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	26.4440779041045	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	3281566	True	NA	3	True	AATAAA	-17	NA	3283509	3318574	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3288453_3288571_3289392_3291452_3309460_3310947_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
WTC11_00031241	chr16	+	851	3	FSM	ENSG00000006194.10	ENST00000575823.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	36	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGAGAAGCCCTATCAG	3282011	False	NA	NA	False	NA	NA	NA	3283954	3289875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3288453_3288571_3289392
WTC11_00031242	chr16	+	691	3	FSM	ENSG00000006194.10	ENST00000574674.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTTGAATGTCTCTT	3288459	False	NA	NA	False	AATATA	-19	NA	3290402	3301401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3290554_3299105_3299157_3300912
WTC11_00031243	chr16	+	418	1	FSM	ENSG00000279031.1	ENST00000622977.1	525	1	99	8	99	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATTACGCAGTCTC	3291034	False	NA	-3	True	ATTAAA	-10	NA	3292977	3293395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3293000_3293400
WTC11_00031244	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	23.6474100061719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	3	True	AATAAA	-17	NA	3305405	3318574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
WTC11_00031246	chr16	+	2872	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	-13	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	16.0043396892496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3303612	True	NA	NA	False	AATAAA	-17	NA	3305483	3318851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
WTC11_00031247	chr16	+	4679	7	NIC	ENSG00000162086.16	novel	2859	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	19.7463076717311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	3303638	True	NA	3	True	AATAAA	-17	NA	3305509	3318574	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3305644_3308312_3310947_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
WTC11_00031252	chr16	+	2471	3	FSM	ENSG00000103343.13	ENST00000268655.5	2459	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	62	junction_2	12.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGGCAAAGTTAATTG	3399073	True	NA	17	True	AATAAA	-20	NA	3401202	3409364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3402407_3404425_3404649_3408320
WTC11_00031257	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	114.607938607396	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3442930	True	NA	20	True	AATAAA	-16	NA	3443679	3486953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
WTC11_00031261	chr16	+	2640	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	-21	0	-2	0	multi-exon	TRUE	canonical	2	90	junction_6	79.6061485620859	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454018	True	NA	19	True	AATAAA	-15	NA	3457990	3486952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
WTC11_00031262	chr16	+	2524	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	-2	0	-2	0	multi-exon	FALSE	canonical	2	26	junction_1	114.468161512274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454018	True	NA	19	True	AATAAA	-15	NA	3457990	3486952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
WTC11_00031263	chr16	+	2538	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	-7	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	53.8072692321606	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454098	True	NA	19	True	AATAAA	-15	NA	3458070	3486952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
WTC11_00031264	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	51.8204592800952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	3454072	True	NA	-19	True	NA	NA	NA	3458044	3486914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
WTC11_00031269	chr16	+	1096	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	-7	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	113.994034931658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3454098	True	NA	NA	False	NA	NA	NA	3458070	3485786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
WTC11_00031270	chr16	+	2399	6	NIC	ENSG00000122390.19	novel	2531	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_1	105.163872123463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454121	True	NA	19	True	AATAAA	-15	NA	3458093	3486952	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
WTC11_00031271	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	25.7972866790289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	3454132	True	NA	-92	True	NA	NA	NA	3458104	3486841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
WTC11_00031272	chr16	+	907	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	-119	45	-1	0	multi-exon	FALSE	canonical	2	12	junction_4	103.698408859538	2459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGCATTCACTGGGAG	3454038	True	NA	NA	False	NA	NA	NA	3458010	3485559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
WTC11_00031274	chr16	+	735	7	FSM	ENSG00000103351.13	ENST00000574592.5	726	7	-9	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_1	28.6627904356076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAAAAGCAGTATGACA	3500241	True	NA	NA	False	NA	NA	NA	3500972	3523196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3501090_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157
WTC11_00031275	chr16	+	4105	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	-22	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5362284915914	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	3500250	True	NA	NA	False	AATACA	-23	NA	3500981	3539048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
WTC11_00031276	chr16	+	1203	11	FSM	ENSG00000103351.13	ENST00000571025.5	5126	11	-14	3937	0	-223	multi-exon	FALSE	canonical	3	61	junction_1	13.0954190463688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCCATAGATGGGAGTG	3500272	True	NA	NA	False	NA	NA	NA	3501003	3532888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785
WTC11_00031277	chr16	+	580	2	FSM	ENSG00000213918.11	ENST00000576792.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCATGGCGTTCTCGTA	NA	False	NA	NA	False	NA	NA	NA	3657249	3658207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3657342_3657719
WTC11_00031278	chr16	+	494	1	FSM	ENSG00000262516.1	ENST00000572774.1	483	1	196	-207	196	207	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGCTCTACTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	3840723	3841217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3840700_3841200
WTC11_00031279	chr16	+	3897	7	FSM	ENSG00000126603.9	ENST00000433375.2	3900	7	0	3	0	-3	multi-exon	TRUE	canonical	3	11	junction_1	3.65148371670111	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTTGTATGTCGTGG	NA	False	NA	12	True	AATAAA	-13	NA	4316066	4339592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4316255_4332214_4332453_4333346_4333520_4334800_4334978_4335059_4335194_4335274_4335394_4336724
WTC11_00031280	chr16	+	3847	2	FSM	ENSG00000168140.5	ENST00000304735.4	2816	2	0	-1031	0	1031	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCAGCCAGACCCAGGG	4370668	True	NA	NA	False	NA	NA	NA	4371847	4384569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4371994_4380868
WTC11_00031281	chr16	+	2597	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	428	junction_1	54.0522894982257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425853	4456775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
WTC11_00031282	chr16	+	2714	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	-14	0	-6	0	multi-exon	FALSE	canonical	3	111	junction_11	175.315206093491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425853	4456775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
WTC11_00031284	chr16	+	571	1	FSM	ENSG00000277170.1	ENST00000614983.1	479	1	-117	25	-117	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGATAATTTATACCA	4426740	False	NA	NA	False	ATTAAA	-7	NA	4426784	4427355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426800_4427400
WTC11_00031287	chr16	+	2749	3	FSM	ENSG00000103423.14	ENST00000576180.1	2288	3	-461	0	-461	0	multi-exon	FALSE	canonical	3	111	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTGGTCATTTCTTCT	4449071	False	NA	14	True	AAAAAG	-14	NA	4449092	4456772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4450498_4454810_4454928_4455545
WTC11_00031289	chr16	+	1740	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	-13	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	193.229811364603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	NA	False	NA	12	True	AATAAA	-17	NA	4474689	4510346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
WTC11_00031290	chr16	+	1776	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	21	0	-18	0	multi-exon	FALSE	canonical	3	20	junction_1	218.97260102579	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	4475821	True	NA	-39	True	NA	NA	NA	4476360	4510295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
WTC11_00031291	chr16	+	1035	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	-8	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	211.391816303281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	4475858	True	NA	-60	True	ACTAAA	-6	NA	4476397	4509836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
WTC11_00031292	chr16	+	1689	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	-16	0	3	0	multi-exon	FALSE	canonical	3	365	junction_1	51.6975821484912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	4475842	True	NA	13	True	AATAAA	-18	NA	4476381	4510347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
WTC11_00031294	chr16	+	514	2	FSM	ENSG00000103415.12	ENST00000570622.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCCTCCCGACTGACCA	4508048	False	NA	NA	False	NA	NA	NA	4508058	4509779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4508205_4509411
WTC11_00031295	chr16	+	4042	18	NIC	ENSG00000102858.13	novel	6425	17	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	73.6333383197498	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4617893	True	NA	14	True	AATAAA	-13	NA	4624758	4690972	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
WTC11_00031297	chr16	+	3940	17	FSM	ENSG00000102858.13	ENST00000262370.12	3930	17	-10	0	-8	0	multi-exon	TRUE	canonical	3	54	junction_12	54.9715480385081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4617950	True	NA	14	True	AATAAA	-13	NA	4624815	4690972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
WTC11_00031298	chr16	+	1756	17	FSM	ENSG00000102858.13	ENST00000399577.9	6425	17	0	4669	0	2371	multi-exon	FALSE	canonical	3	39	junction_16	66.2267647933975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGACCTCCCAGACGC	4618002	True	NA	NA	False	NA	NA	NA	4624867	4686303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
WTC11_00031299	chr16	+	3822	16	FSM	ENSG00000102858.13	ENST00000588994.5	1665	16	-93	-2064	0	0	multi-exon	FALSE	canonical	3	152	junction_11	28.8795198482708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4618002	True	NA	14	True	AATAAA	-13	NA	4624867	4690972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
WTC11_00031301	chr16	+	994	11	FSM	ENSG00000102858.13	ENST00000590790.5	994	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	75.2491860421094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGCCAGCAAGAAACCTAA	NA	False	NA	NA	False	TTTAAA	-25	NA	4650386	4680067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665098_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031
WTC11_00031305	chr16	+	1670	3	FSM	ENSG00000168101.14	ENST00000586536.1	1406	3	-264	0	-251	0	multi-exon	FALSE	canonical	3	31	junction_2	209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	4693419	False	NA	28	True	AATAAA	-32	NA	4693442	4695859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693977_4694309_4694957
WTC11_00031306	chr16	+	1469	3	FSM	ENSG00000168101.14	ENST00000304301.10	1349	3	-124	4	-124	0	multi-exon	FALSE	canonical	3	426	junction_2	11.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGCCCTGTGTGTTT	4693546	False	NA	24	True	AATAAA	-28	NA	4693569	4695855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693977_4694239_4694957
WTC11_00031307	chr16	+	201	3	FSM	ENSG00000267795.6	ENST00000586440.1	549	3	101	247	101	13	multi-exon	FALSE	canonical	3	3	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCGGTGGCAGTAACAAAG	4795760	False	NA	NA	False	NA	NA	NA	4795813	4796244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4795859_4795947_4796049_4796189
WTC11_00031308	chr16	+	2305	5	FSM	ENSG00000118900.15	ENST00000592120.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	39.436658073422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAGAAAAGAAGAAAAA	4846650	True	NA	NA	False	NA	NA	NA	4846664	4859129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024
WTC11_00031309	chr16	+	6402	18	FSM	ENSG00000118900.15	ENST00000262376.11	6443	18	0	41	0	0	multi-exon	FALSE	canonical	3	89	junction_1	13.2644124136051	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTTCTCACTCTTTTC	4845960	True	NA	21	True	AATAAA	-21	NA	4847480	4882360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848211_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4877384_4877475_4880082
WTC11_00031310	chr16	+	3530	17	FSM	ENSG00000118900.15	ENST00000590769.5	3530	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.1509332447821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGAGCCGGGCCCTTGC	4848368	False	NA	NA	False	NA	NA	NA	4848379	4880294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4880082
WTC11_00031314	chr16	+	3043	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	10	0	-6	0	multi-exon	TRUE	canonical	3	273	junction_6	13.5610038878499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	5068481	True	NA	-82	True	NA	NA	NA	5071815	5085487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
WTC11_00031316	chr16	+	2084	13	FSM	ENSG00000033011.14	ENST00000682797.1	2094	13	10	0	-6	0	multi-exon	FALSE	canonical	2	8	junction_8	81.4621589042012	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	5068481	True	NA	-37	True	NA	NA	NA	5071815	5085532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079107_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
WTC11_00031319	chr16	+	3924	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	-24	0	-3	0	multi-exon	FALSE	canonical	3	271	junction_11	15.4189187544249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	5068484	True	NA	23	True	GATAAA	-18	NA	5071818	5087379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
WTC11_00031320	chr16	+	1517	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	-7	0	1	0	multi-exon	FALSE	canonical	3	68	junction_3	41.5980175216127	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	8618950	True	NA	23	True	AGTAAA	-24	NA	8621683	8646224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
WTC11_00031321	chr16	+	4991	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	-17	0	-2	0	multi-exon	FALSE	canonical	3	128	junction_10	25.3355481487968	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	8618947	True	NA	NA	False	AATACA	-17	NA	8621680	8649654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
WTC11_00031322	chr16	+	499	4	FSM	ENSG00000067365.15	ENST00000561993.5	656	4	0	157	0	-157	multi-exon	FALSE	canonical	3	187	junction_1	7.03957069398096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGACTGATGAAGAGAG	8639094	False	NA	NA	False	NA	NA	NA	8639106	8642770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8639163_8641130_8641185_8642126_8642208_8642462
WTC11_00031325	chr16	+	596	5	FSM	ENSG00000183044.12	ENST00000565671.1	596	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.20483682299543	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGTTGGAGCTAATA	NA	False	NA	NA	False	TTTAAA	-2	NA	8746001	8760429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8760128
WTC11_00031332	chr16	+	2303	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	-18	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.1556306634789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	8791985	True	NA	27	True	ATTAAA	-15	NA	8797820	8849325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
WTC11_00031335	chr16	+	5397	4	FSM	ENSG00000140650.13	ENST00000567697.2	5397	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	28.8905982400273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTATTGTTTCCTGTTT	8807545	False	NA	15	True	ATTAAA	-3	NA	8807563	8849313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8811179_8811637_8811714_8812990_8813107_8847723
WTC11_00031336	chr16	+	11016	3	FSM	ENSG00000182831.12	ENST00000574285.2	10359	3	-657	0	-110	0	multi-exon	FALSE	canonical	3	257	junction_1	3	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTGGTTGTTAATCT	NA	False	NA	20	True	AATAAA	-21	NA	9091533	9113181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_9092271_9092920_9093002_9102983
WTC11_00031337	chr16	+	6426	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	-474	0	474	multi-exon	FALSE	canonical	3	235	junction_3	12.0369800568452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCCTAGGCTGGAGT	9086495	True	NA	NA	False	AAAAAG	-42	NA	9091643	9122109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
WTC11_00031338	chr16	+	1418	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTATACACACATGCA	9672169	True	NA	NA	False	NA	NA	NA	9674399	9718086	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_9674462_9716730
WTC11_00031339	chr16	+	3307	5	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	1797	2	NA	NA	-120237	0	multi-exon	FALSE	canonical	3	24	junction_4	18.8729303501073	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	9672169	True	NA	-22	True	NA	NA	NA	9674399	9810726	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9807654_9810392_9810465
WTC11_00031340	chr16	+	3549	5	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	179	2	NA	NA	-120237	39	intron_retention	FALSE	canonical	1	2	junction_2	27.6620227026152	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	9672169	True	NA	17	True	AATAAA	-20	NA	9674399	9810765	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_9674462_9701069_9701199_9794521_9794723_9805478_9805525_9807654
WTC11_00031341	chr16	+	1797	2	FSM	ENSG00000287830.1	ENST00000653203.1	1797	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	NA	False	NA	-22	True	NA	NA	NA	9808855	9810726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_9810392_9810465
WTC11_00031342	chr16	+	1687	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	-6	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383159	True	NA	11	True	AATAAA	-21	NA	10386054	10387741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10386100_10387700
WTC11_00031343	chr16	+	579	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	-3	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	1	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383159	True	NA	11	True	AATAAA	-21	NA	10386054	10387741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10386123_10387143_10387291_10387377
WTC11_00031345	chr16	+	3703	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	-39	1	-39	0	multi-exon	FALSE	canonical	3	26	junction_5	11.6873881309005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTATGTCTTTATTT	10386002	False	NA	18	True	AATAAA	-16	NA	10386015	10483637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
WTC11_00031347	chr16	+	3406	10	FSM	ENSG00000166669.14	ENST00000568027.5	3406	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	15.7252647232816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	NA	False	NA	19	True	AATAAA	-17	NA	10428900	10483638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
WTC11_00031348	chr16	+	582	6	FSM	ENSG00000103274.11	ENST00000574334.5	582	6	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_3	97.4404433487451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATGGAGCAGTGATCAT	NA	False	NA	NA	False	NA	NA	NA	10743785	10757994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10755720_10755754_10756689_10756781_10757872
WTC11_00031349	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	26.4166614090426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740779	True	NA	22	True	AATAAA	-16	NA	10743841	10769351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
WTC11_00031350	chr16	+	1314	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	-129	0	-60	0	multi-exon	FALSE	canonical	3	17	junction_4	78.4551456345803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	NA	False	NA	22	True	AATAAA	-16	NA	10743725	10769351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
WTC11_00031351	chr16	+	674	4	FSM	ENSG00000103274.11	ENST00000571175.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	116.819899370308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10757855	False	NA	22	True	AATAAA	-16	NA	10757872	10769351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10758028_10761363_10761475_10761756_10761860_10769046
WTC11_00031354	chr16	+	6753	23	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_22	9.72652928339942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGAATGTAGCGTGCTG	10943212	True	NA	5	True	AATAAA	-15	NA	10944563	11182181	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387_11166553_11178334
WTC11_00031355	chr16	+	413	4	FSM	ENSG00000038532.16	ENST00000487189.5	532	4	3	116	3	-116	multi-exon	FALSE	canonical	3	34	junction_2	8.48528137423857	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTGTAGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	11024820	11044106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11024922_11039753_11039877_11042253_11042364_11044027
WTC11_00031356	chr16	+	479	1	FSM	ENSG00000274038.1	ENST00000615581.1	479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAATACAGTGTTTTT	NA	False	NA	NA	False	ACTAAA	-15	NA	11056555	11057034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11056600_11057000
WTC11_00031358	chr16	+	1436	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	-9	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	11338316	True	NA	9	True	AATAAA	-13	NA	11345449	11351760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11345767_11350641
WTC11_00031359	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	11664809	True	NA	18	True	AATAAA	-33	NA	11668454	11679152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11668541_11675974
WTC11_00031360	chr16	+	669	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	94	45	94	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTTTGTGTGGAAGGGG	11797365	True	NA	NA	False	NA	NA	NA	11797561	11798230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11797600_11798200
WTC11_00031362	chr16	+	1157	2	FSM	ENSG00000237515.9	ENST00000639941.1	1135	2	-22	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAAGTACAGCTGCATGAA	12899742	True	NA	NA	False	CATAAA	-8	NA	12901597	12916814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_12902628_12916687
WTC11_00031363	chr16	+	6701	4	NIC	ENSG00000237515.9	novel	6749	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	12.0277457017791	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTGGGATTGTCATGT	12899742	True	NA	3	True	AATAAA	-16	NA	12901597	13240416	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_12902628_12916687_12916816_13203393_13203550_13235029
WTC11_00031364	chr16	+	4043	2	FSM	ENSG00000237515.9	ENST00000423335.2	4043	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGAGCATTTTCATTA	12901738	False	NA	19	True	AATAAA	-23	NA	12901756	12911650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_12902628_12908478
WTC11_00031365	chr16	+	5389	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGACATAGGGTGGGGC	NA	False	NA	NA	False	AAAAAG	-10	NA	13352291	13357680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_13352300_13357700
WTC11_00031366	chr16	+	783	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6741	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	7.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCTGTAAACCA	13355371	False	NA	NA	False	AATAAA	-7	NA	13355469	13562910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_13355917_13474209_13474342_13562706
WTC11_00031368	chr16	+	9980	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	-15	-7162	5	3528	multi-exon	FALSE	canonical	3	20	junction_6	8.29556065197599	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTCTTTCTGTGATTAT	13918599	True	NA	NA	False	AATAAA	-17	NA	13920142	13943889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
WTC11_00031370	chr16	+	1254	7	FSM	ENSG00000175595.16	ENST00000682552.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	8.61684396980704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTAATTAGCTCTTTAA	13918634	True	NA	NA	False	AAAAAG	-42	NA	13920177	13934355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191
WTC11_00031372	chr16	+	8865	17	FSM	ENSG00000186260.17	ENST00000571589.6	8804	17	-61	0	-61	0	multi-exon	FALSE	canonical	2	27	junction_7	12.2931319748061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	14071217	False	NA	7	True	AATAAA	-16	NA	14071257	14266773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14071366_14079289_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
WTC11_00031373	chr16	+	547	5	FSM	ENSG00000186260.17	ENST00000574998.5	545	5	-2	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	20.4374044340273	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCCACGTAAGATTTA	14067731	True	NA	NA	False	NA	NA	NA	14071318	14210298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14071366_14079289_14079355_14092720_14092883_14140543_14140761_14210242
WTC11_00031375	chr16	+	2403	1	FSM	ENSG00000276564.1	ENST00000618736.1	2403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTGTGTTACTGT	NA	False	NA	NA	False	AATAAA	-19	NA	14150832	14153235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14150800_14153200
WTC11_00031376	chr16	+	623	1	FSM	ENSG00000262470.2	ENST00000571473.2	623	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTATGTGCTTTGTTA	NA	False	NA	NA	False	AAAACA	-30	NA	14200356	14200979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14200400_14201000
WTC11_00031379	chr16	+	1490	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	-109	33	-108	0	multi-exon	TRUE	canonical	3	210	junction_2	22.6274169979695	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	NA	False	NA	-9	True	NA	NA	NA	14632822	14650556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
WTC11_00031380	chr16	+	3031	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	-128	0	-108	0	multi-exon	FALSE	canonical	3	124	junction_6	50.059556367126	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	NA	False	NA	19	True	AATAAA	-30	NA	14632822	14669236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
WTC11_00031384	chr16	+	1096	7	ISM	ENSG00000254852.8	ENST00000553201.1	1053	8	4308	-35	4308	35	3prime_fragment	FALSE	canonical	3	54	junction_6	72.033942616581	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	14755120	14765448	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
WTC11_00031385	chr16	+	2469	6	ISM	ENSG00000254852.8	ENST00000553201.1	1053	8	4308	-49	4308	49	intron_retention	FALSE	canonical	3	118	junction_4	57.7948094555212	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	NA	False	AATAAA	-39	NA	14755120	14765462	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607
WTC11_00031386	chr16	+	4314	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	-3	1	-3	0	multi-exon	TRUE	canonical	3	744	junction_11	167.347359969881	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	21	True	AATAAA	-28	NA	14833717	14896156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
WTC11_00031389	chr16	+	7882	36	NNC	ENSG00000183458.14	novel	6919	32	NA	NA	-126	14791	intron_retention	TRUE	canonical	3	60	junction_8	104.821776830767	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCCCTGACTGTAAATT	NA	False	NA	NA	False	NA	NA	NA	14911424	14950499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14911908_14917539_14917612_14917732_14917805_14918072_14918243_14918454_14919127_14919244_14919429_14919862_14920084_14920271_14920388_14920797_14920925_14921279_14921528_14922000_14922757_14923654_14923787_14923976_14924153_14924504_14924639_14925732_14925877_14926003_14926284_14926376_14926591_14926656_14926817_14927206_14927360_14928380_14928526_14929250_14929422_14929519_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219
WTC11_00031392	chr16	+	2401	15	NIC	ENSG00000183426.17	novel	5345	28	NA	NA	3268	14	intron_retention	FALSE	canonical	3	29	junction_13	99.4777177388515	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	NA	False	AATAAA	-39	NA	14930550	14952074	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14950751_14950822_14951614
WTC11_00031397	chr16	+	4599	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	-1	0	-1	0	multi-exon	FALSE	canonical	3	377	junction_4	48.2281938049306	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	14974999	False	NA	NA	False	AATAAA	-17	NA	14975024	15038332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
WTC11_00031401	chr16	+	3793	22	FSM	ENSG00000179889.20	ENST00000569715.5	3775	22	-18	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	101.505559871404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATTCAGTTTATAA	14969502	True	NA	5	True	AATAAA	-18	NA	14975104	15037687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
WTC11_00031402	chr16	+	4828	22	FSM	ENSG00000179889.20	ENST00000570001.5	4828	22	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	49.3630632977795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATTCAGTTTATAA	14969502	True	NA	5	True	AATAAA	-18	NA	14975104	15037687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
WTC11_00031409	chr16	+	414	2	Antisense	novelGene_ENSG00000270580.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	165	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTGATGGACAAAATTA	NA	False	NA	NA	False	NA	NA	NA	15104309	15104794	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_15104409_15104479
WTC11_00031411	chr16	+	5830	3	FSM	ENSG00000156968.9	ENST00000287594.7	5820	3	-19	9	-19	-9	multi-exon	FALSE	canonical	3	9	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATTAAAATGACTGAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	15395734	15413259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15396208_15407823_15407854_15407932
WTC11_00031412	chr16	+	5901	4	FSM	ENSG00000156968.9	ENST00000396385.4	5894	4	-19	12	-19	-9	multi-exon	FALSE	canonical	3	16	junction_2	5.71547606649408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATTAAAATGACTGAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	15395734	15413259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15396208_15400786_15400858_15407823_15407854_15407932
WTC11_00031413	chr16	+	2226	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	-115	0	-2	0	multi-exon	FALSE	canonical	3	106	junction_5	17.91758912354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	NA	False	NA	9	True	ATTAAA	-37	NA	15434472	15588259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
WTC11_00031416	chr16	+	3283	9	NIC	ENSG00000072864.16	novel	3203	9	NA	NA	-7	1436	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	12.3433939822076	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTCTGGTCAAAGAGGC	15648428	True	NA	28	True	AATAAA	-29	NA	15650200	15701927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728
WTC11_00031417	chr16	+	3477	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	-274	0	-237	0	multi-exon	FALSE	canonical	3	29	junction_8	11.0227038425243	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	NA	False	NA	18	True	AATAAA	-20	NA	15649970	15726353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
WTC11_00031423	chr16	+	1699	12	FSM	ENSG00000103222.20	ENST00000574224.2	2616	12	53	864	53	-864	multi-exon	FALSE	canonical	0	0	junction_1	47.91555933563	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAAGCCACATTTTT	15949168	False	NA	NA	False	NA	NA	NA	15949190	16056295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949261_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091
WTC11_00031424	chr16	+	6513	31	FSM	ENSG00000103222.20	ENST00000399410.8	6504	31	-9	0	-9	0	multi-exon	FALSE	canonical	3	105	junction_4	38.0356703927014	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	15949441	True	NA	15	True	AGTAAA	-19	NA	15949606	16143053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00031426	chr16	+	6542	32	FSM	ENSG00000103222.20	ENST00000399408.7	6594	32	36	16	-3	5	multi-exon	FALSE	canonical	1	1	junction_19	57.6770044006146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTCTTTCTAAAGAAT	15949447	True	NA	20	True	AGTAAA	-24	NA	15949612	16143058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16098872_16098903_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00031427	chr16	+	6087	28	FSM	ENSG00000103222.20	ENST00000677164.1	6276	28	0	189	0	-6	multi-exon	FALSE	canonical	2	3	junction_15	57.172998125668	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGAATGGTTCCCTTT	15949554	False	NA	30	True	AGTAAA	-34	NA	15949576	16143068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00031430	chr16	+	3767	23	FSM	ENSG00000103226.19	ENST00000574894.2	3757	23	-10	0	-10	0	multi-exon	FALSE	canonical	3	75	junction_12	344.093926370823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGCCCTGTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	16232544	16278371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369
WTC11_00031431	chr16	+	3826	28	FSM	ENSG00000103226.19	ENST00000679086.1	3816	28	-10	0	-10	0	multi-exon	FALSE	canonical	2	24	junction_27	364.6856925093	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGTTACCATTAATGAA	NA	False	NA	NA	False	NA	NA	NA	16232544	16284067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16283585
WTC11_00031432	chr16	+	4191	30	FSM	ENSG00000103226.19	ENST00000678192.1	4181	30	-10	0	-10	0	multi-exon	FALSE	canonical	1	13	junction_29	358.535692845211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTGTTGTAGCTCAT	NA	False	NA	NA	False	AATAAA	-10	NA	16232544	16294792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16294167
WTC11_00031433	chr16	+	4328	31	FSM	ENSG00000103226.19	ENST00000399336.9	4320	31	-8	0	-8	0	multi-exon	TRUE	canonical	3	75	junction_12	316.252704863268	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	NA	False	NA	NA	False	AATAAA	-29	NA	16232519	16294811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
WTC11_00031434	chr16	+	5217	32	FSM	ENSG00000103226.19	ENST00000676846.1	5231	32	14	0	-8	0	multi-exon	FALSE	canonical	3	10	junction_31	349.586409415874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGTTATGAGCACA	NA	False	NA	NA	False	NA	NA	NA	16232519	16300806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294769_16299874
WTC11_00031438	chr16	+	4063	30	FSM	ENSG00000103226.19	ENST00000677781.1	4063	30	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	347.824135179087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAGCTCATCATAGATG	NA	False	NA	NA	False	AATAAA	-18	NA	16232666	16294800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
WTC11_00031443	chr16	+	3147	2	FSM	ENSG00000103226.19	ENST00000570732.2	3147	2	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTGTTGTAGCTCAT	NA	False	NA	NA	False	AATAAA	-10	NA	16291222	16294792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16293745_16294167
WTC11_00031444	chr16	+	3856	16	NIC	ENSG00000183889.12	novel	2519	12	NA	NA	-7364	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_8	35.9904925717273	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCGAGGAGGAGGGCT	NA	False	NA	NA	False	NA	NA	NA	16310079	16324803	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_16310563_16316190_16316263_16316383_16316456_16316723_16316894_16317105_16317778_16317895_16318080_16318513_16318735_16318922_16319039_16319448_16319576_16319930_16320179_16320651_16321408_16322305_16322438_16322627_16322804_16323155_16323290_16324383_16324528_16324654
WTC11_00031447	chr16	+	2962	18	NNC	ENSG00000183889.12	novel	4514	25	NA	NA	2678	0	intron_retention	FALSE	canonical	3	36	junction_8	116.735231129472	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAGGCAGAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	16325026	16347455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16327907_16328004_16328199_16328650_16328808_16328987_16329241_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333885_16340305_16340435_16344044_16344145_16344307_16344453_16347402
WTC11_00031448	chr16	+	1552	10	FSM	ENSG00000183889.12	ENST00000381497.6	1552	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	156.673601107368	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	16331876	16350590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16331981_16333646_16333885_16335860_16335993_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16350091
WTC11_00031450	chr16	+	1462	10	NIC	ENSG00000183889.12	novel	1552	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	43	junction_8	142.520520506459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	16333656	16350590	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_16333885_16336051_16336138_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16349228_16349299_16350091
WTC11_00031453	chr16	+	851	3	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	194	19759	194	-19759	internal_fragment	FALSE	canonical	3	130	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTCAGGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	16356417	16357748	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16356489_16356756_16356927_16357138
WTC11_00031454	chr16	+	368	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	1707	18774	1707	-18774	internal_fragment	FALSE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCACAGCTACGTCTGCG	NA	False	NA	NA	False	NA	NA	NA	16357930	16358733	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16358113_16358547
WTC11_00031455	chr16	+	1355	5	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	3254	14769	3254	-14769	internal_fragment	FALSE	canonical	3	43	junction_2	23.1354706025185	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCCGGCCGTGCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	16359477	16362738	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16359605_16359959_16360208_16360680_16361437_16362335_16362468_16362646
WTC11_00031456	chr16	+	512	3	NNC	ENSG00000227827.3	novel	9932	31	NA	NA	11645	-8316	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	86.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCACCAAGGTGCACTT	NA	False	NA	NA	False	GGGGCT	-36	NA	16367868	16369191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16367988_16368671_16368816_16368942
WTC11_00031457	chr16	+	903	3	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	14890	5020	14890	-5020	internal_fragment	TRUE	canonical	3	58	junction_1	73	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCACCAGCCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	16371113	16372487	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16371659_16371949_16372107_16372286
WTC11_00031458	chr16	+	574	3	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	16447	2686	16447	-2686	internal_fragment	FALSE	canonical	3	100	junction_2	41	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCGGCCCTCCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	16372670	16374821	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16372860_16374350_16374522_16374607
WTC11_00031459	chr16	+	1104	10	Fusion	ENSG00000227827.3_ENSG00000214967.5	novel	561	5	NA	NA	-4219	-293	multi-exon	FALSE	canonical	3	76	junction_2	74.8004753401415	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCTGAAACTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16374835	16393515	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_16375057_16375146_16375274_16376939_16377057_16383663_16383793_16387398_16387499_16387661_16387807_16390766_16390875_16391890_16391952_16392060_16392097_16393455
WTC11_00031460	chr16	+	561	5	FSM	ENSG00000214967.5	ENST00000344087.4	561	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	115.206336631281	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCCTTCCACCCTCAG	NA	False	NA	NA	False	NA	NA	NA	16390833	16393808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16390875_16391890_16391952_16392060_16392097_16392592_16392663_16393455
WTC11_00031462	chr16	+	4389	16	FSM	ENSG00000170537.13	ENST00000304381.10	4401	16	12	0	12	0	multi-exon	FALSE	canonical	2	24	junction_7	4.16333199893227	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCGTGTATACTGGAA	18983412	True	NA	7	True	ATTAAA	-23	NA	18983945	19063942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415_19059495_19061777
WTC11_00031463	chr16	+	714	5	FSM	ENSG00000167186.11	ENST00000566049.5	703	5	-11	0	1	0	multi-exon	FALSE	canonical	2	2	junction_2	30.2737510064412	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTTTTTTTTAA	19066896	True	NA	4	True	AATAAA	-8	NA	19067614	19078283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19067738_19071927_19072107_19075720_19075861_19077305_19077375_19078080
WTC11_00031464	chr16	+	4850	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	1	-2209	1	2209	multi-exon	FALSE	canonical	3	65	junction_1	14.319217855735	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATGTCAATGGAATG	19066896	True	NA	NA	False	NA	NA	NA	19067614	19082304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
WTC11_00031466	chr16	+	1733	7	FSM	ENSG00000103528.17	ENST00000568115.5	1721	7	-12	0	8	0	multi-exon	FALSE	canonical	2	6	junction_1	18.9802528961023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGTGTCTGGTTG	19167838	True	NA	3	True	AATAAA	-15	NA	19168247	19250078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19168662_19173443_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
WTC11_00031467	chr16	+	1748	7	NIC	ENSG00000103528.17	novel	1721	7	NA	NA	-9	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.672315572906	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGTCTGGTTGCTTT	19167841	True	NA	7	True	AATAAA	-19	NA	19168250	19250082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19168662_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
WTC11_00031468	chr16	+	3080	8	FSM	ENSG00000103528.17	ENST00000355377.7	3088	8	8	0	8	0	multi-exon	FALSE	canonical	3	26	junction_7	10.3490115864428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGAGTTATCTTTTTCT	19167838	True	NA	17	True	ATTAAA	-21	NA	19168247	19268332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
WTC11_00031469	chr16	+	722	1	FSM	ENSG00000259871.1	ENST00000565085.1	1363	1	-71	712	-71	-712	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTTTTAAAAATGTAT	NA	False	NA	NA	False	GATAAA	-1	NA	19315092	19315814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19315100_19315800
WTC11_00031470	chr16	+	4903	22	FSM	ENSG00000103534.17	ENST00000396229.6	4917	22	0	14	0	-14	multi-exon	FALSE	canonical	1	4	junction_1	4.92943401699335	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTCAAACCAAATATGAA	19410718	False	NA	NA	False	AATAAA	-31	NA	19410734	19499099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19411177_19430412_19430641_19439959_19440827_19444080_19444251_19449541_19449632_19460234_19460335_19463279_19463368_19463775_19464025_19466081_19466234_19469680_19469826_19472087_19472244_19474124_19474277_19477439_19477519_19479430_19479529_19481369_19481466_19486944_19487021_19487192_19487327_19490394_19490569_19492149_19492229_19494261_19494367_19497120_19497164_19497919
WTC11_00031472	chr16	+	5417	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	29	0	7	0	multi-exon	FALSE	canonical	3	43	junction_13	23.6293660256789	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	19521047	True	NA	NA	False	AATAAA	-20	NA	19523885	19553408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
WTC11_00031473	chr16	+	5474	15	FSM	ENSG00000103540.16	ENST00000396212.6	5549	15	75	0	7	0	multi-exon	FALSE	canonical	3	29	junction_1	29.227555491351	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	19521047	True	NA	NA	False	AATAAA	-20	NA	19523885	19553408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
WTC11_00031474	chr16	+	3881	31	FSM	ENSG00000103544.16	ENST00000438132.7	3855	31	-30	4	-30	0	multi-exon	FALSE	canonical	3	326	junction_1	43.0751926544992	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATGTTCATGACTG	NA	False	NA	19	True	AATAAA	-12	NA	19555384	19701120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
WTC11_00031476	chr16	+	2250	5	FSM	ENSG00000103544.16	ENST00000546175.5	479	5	0	-1771	0	1771	multi-exon	FALSE	canonical	3	363	junction_3	23.1665167860859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATCTCAGCTCACTGCAA	NA	False	NA	NA	False	NA	NA	NA	19591822	19612314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321
WTC11_00031477	chr16	+	829	8	FSM	ENSG00000174628.16	ENST00000564186.5	882	8	0	53	0	-53	multi-exon	FALSE	canonical	3	15	junction_4	8.98751969144333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGCTGGATTCACTG	19717720	True	NA	NA	False	AAAAAG	-1	NA	19718279	19827137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025
WTC11_00031478	chr16	+	946	8	FSM	ENSG00000174628.16	ENST00000561839.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.0796675180627	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCACTTTCTGCAT	19717755	True	NA	NA	False	AAGAAA	-4	NA	19718314	19856736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
WTC11_00031479	chr16	+	586	4	FSM	ENSG00000005189.20	ENST00000568046.5	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	12.0277457017791	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAATGAGTCAGCTACAC	NA	False	NA	NA	False	NA	NA	NA	20806444	20814982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20806722_20806951_20807092_20813189_20813303_20814926
WTC11_00031481	chr16	+	2706	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	-15	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_7	10.6879692636445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805693	True	NA	11	True	AATAAA	-20	NA	20806511	20849665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
WTC11_00031482	chr16	+	2367	17	NIC	ENSG00000005189.20	novel	2691	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	13.9508064283037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGGGATGTCCACAG	20805708	True	NA	9	True	AATAAA	-18	NA	20806526	20849663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_20806706_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
WTC11_00031483	chr16	+	1558	4	FSM	ENSG00000102897.10	ENST00000439021.5	1558	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	53.0345799141152	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	20900207	False	NA	15	True	AATAAA	-15	NA	20900234	20925004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900536_20915555_20915715_20920121_20920215_20923999
WTC11_00031486	chr16	+	1761	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	-137	2	-50	-2	multi-exon	FALSE	canonical	3	22	junction_2	52.8695328142778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTTGTCTGTCTATT	20900384	False	NA	13	True	AATAAA	-13	NA	20900615	20925002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
WTC11_00031487	chr16	+	1396	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	-18	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	41.7212975189731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20900521	False	NA	17	True	AATAAA	-17	NA	20900752	20925006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
WTC11_00031490	chr16	+	1888	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	-76	0	-58	0	multi-exon	FALSE	canonical	3	81	junction_1	9.3407708461347	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	21156536	True	NA	23	True	AATAAA	-20	NA	21158602	21180609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
WTC11_00031491	chr16	+	1780	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	-63	0	-50	0	multi-exon	FALSE	canonical	3	46	junction_1	23.8890665368072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156544	True	NA	30	True	AATAAA	-27	NA	21158610	21180616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
WTC11_00031495	chr16	+	686	2	Antisense	novelGene_ENSG00000180747.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCCCCACCACCACCAA	NA	False	NA	NA	False	NA	NA	NA	21461473	21462502	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21461949_21462291
WTC11_00031496	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	234.273744794418	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	21585398	True	NA	NA	False	NA	NA	NA	21599557	21656119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
WTC11_00031497	chr16	+	3172	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	-19	0	0	0	multi-exon	FALSE	canonical	3	506	junction_4	127.723089142097	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	21585398	True	NA	28	True	AATAAA	-19	NA	21599557	21657471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
WTC11_00031498	chr16	+	701	3	FSM	ENSG00000197006.15	ENST00000562379.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	336.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTGTGGTCAGTCAGG	21585432	True	NA	NA	False	NA	NA	NA	21599591	21625114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21617864_21618075_21624930
WTC11_00031503	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_9	47.4736924968971	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	21938736	True	NA	58	True	AATAAA	-38	NA	21953360	21983660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
WTC11_00031507	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	22007534	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22008408_22075486_22075700_22080695
WTC11_00031508	chr16	+	778	4	NIC	ENSG00000185716.12	novel	1257	6	NA	NA	28	-88	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCACTCTTTCTCAT	22008306	False	NA	-63	True	ACTAAA	-14	NA	22008338	22087445	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_22008408_22075486_22075700_22085643_22085751_22087056
WTC11_00031509	chr16	+	7388	18	FSM	ENSG00000103319.12	ENST00000263026.10	7398	18	5	5	5	-5	multi-exon	FALSE	canonical	3	38	junction_4	9.13376185020894	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCTCAGACTCAAATG	22203990	True	NA	15	True	AATAAA	-15	NA	22206282	22288733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886
WTC11_00031510	chr16	+	2482	21	FSM	ENSG00000058600.16	ENST00000564209.5	2464	21	-18	0	-16	0	multi-exon	FALSE	canonical	2	11	junction_19	46.0798220482675	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAATTCCTGATGTA	22293551	True	NA	-65	True	NA	NA	NA	22297392	22333935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332122_22332186_22333643
WTC11_00031511	chr16	+	3702	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	-12	0	-12	0	multi-exon	FALSE	canonical	3	152	junction_5	27.5664651342895	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	22293555	True	NA	3	True	AGTAAA	-15	NA	22297396	22335096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
WTC11_00031512	chr16	+	2491	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	-22	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	39.4158172336874	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	22293569	True	NA	17	True	AATAAA	-36	NA	22297410	22334025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
WTC11_00031517	chr16	+	1415	1	FSM	ENSG00000260790.1	ENST00000568827.1	1415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGACTCAAGCTACTTT	22374816	True	NA	NA	False	ATTAAA	-26	NA	22374858	22376273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22374900_22376300
WTC11_00031518	chr16	+	1054	9	FSM	ENSG00000237296.10	ENST00000308347.10	1058	9	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	47.5997308290709	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAGTATATAGAAAGCT	22437438	True	NA	NA	False	NA	NA	NA	22437588	22467286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22437738_22451619_22451659_22454701_22454866_22459354_22459492_22460786_22460843_22462120_22462335_22465692_22465819_22466196_22466270_22467190
WTC11_00031519	chr16	+	740	4	ISM	ENSG00000237296.10	ENST00000381231.5	2219	13	34593	-20	-3400	20	3prime_fragment	FALSE	canonical	3	61	junction_3	41.811747418904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAGAAAAGAACCCCACA	NA	False	NA	NA	False	NA	NA	NA	22471636	22478842	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_22471853_22474124_22474227_22474948_22475219_22478690
WTC11_00031520	chr16	+	2913	17	FSM	ENSG00000237296.10	ENST00000431681.5	2913	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	12.4296457612436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGTTCTATTGTATGTA	NA	False	NA	NA	False	AATATA	-18	NA	22475036	22492220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22475219_22478690_22478822_22478975_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706
WTC11_00031522	chr16	+	3797	9	FSM	ENSG00000243716.11	ENST00000521555.6	3797	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	156.651683680706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	22513521	22536521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22513611_22513763_22513922_22519137_22519270_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
WTC11_00031524	chr16	+	3801	7	FSM	ENSG00000243716.11	ENST00000424340.6	3865	7	125	-61	1	-8	multi-exon	FALSE	canonical	3	150	junction_4	108.546457028009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAATAAAATAAATACT	NA	False	NA	NA	False	AATAAA	-9	NA	22513522	22536505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
WTC11_00031530	chr16	+	4867	4	NNC	ENSG00000243716.11	novel	852	3	NA	NA	-1346	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	182.167200365183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAATAAAATAAATACT	NA	False	NA	NA	False	AATAAA	-9	NA	22530145	22536505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22532121_22532229_22532266_22533625_22534033_22534056
WTC11_00031533	chr16	+	2323	2	FSM	ENSG00000122254.7	ENST00000261374.4	2329	2	5	1	5	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGCTTTTCTCTGTA	22814110	True	NA	10	True	AATAAA	-22	NA	22814166	22916337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22815096_22914943
WTC11_00031534	chr16	+	3452	13	FSM	ENSG00000166828.3	ENST00000300061.3	3477	13	23	2	23	-2	multi-exon	FALSE	canonical	1	2	junction_9	1.44096803881588	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATTTGTTCAAGTTTT	23182717	False	NA	NA	False	AATAAA	-21	NA	23182767	23216881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23182814_23186227_23186589_23189370_23189672_23192351_23192543_23194170_23194275_23197263_23197428_23209749_23209849_23212033_23212152_23212677_23212757_23212836_23212895_23213101_23213164_23214711_23214788_23215088
WTC11_00031535	chr16	+	2570	13	NNC	ENSG00000168447.11	novel	1852	12	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	7.22841614740048	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301390	True	NA	7	True	AATAAA	-16	NA	23301785	23381294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_23301932_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
WTC11_00031536	chr16	+	1825	11	FSM	ENSG00000168447.11	ENST00000568085.5	1825	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	9.2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCTGCCCACCCCGGG	NA	False	NA	NA	False	NA	NA	NA	23348591	23380803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
WTC11_00031537	chr16	+	555	2	FSM	ENSG00000168447.11	ENST00000566870.1	560	2	0	5	0	-5	multi-exon	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTCAAGACTCCTTTG	NA	False	NA	5	True	AATAGA	-12	NA	23348794	23353239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23348911_23352800
WTC11_00031539	chr16	+	740	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	-10	0	-10	0	multi-exon	FALSE	canonical	2	7	junction_2	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	23452448	True	NA	-7	True	NA	NA	NA	23452747	23457588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23453266_23455469_23455531_23457427
WTC11_00031540	chr16	+	658	2	FSM	ENSG00000260136.6	ENST00000656451.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCTCATATAGTCTTTT	23452482	True	NA	6	True	CATAAA	-11	NA	23452781	23457601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23453266_23457427
WTC11_00031541	chr16	+	310	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	221	48	221	-48	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATCTCAAAAAATAAATAAA	23452928	False	NA	-38	True	NA	NA	NA	23453227	23455741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23453266_23455469
WTC11_00031542	chr16	+	790	4	FSM	ENSG00000103353.16	ENST00000567264.1	642	4	-120	-28	-114	0	multi-exon	FALSE	canonical	3	13	junction_3	248.746635934818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTGTCTCAAGTCTA	23557577	False	NA	NA	False	NA	NA	NA	23557606	23559868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23557768_23557949_23558280_23559467_23559677_23559778
WTC11_00031543	chr16	+	4745	7	FSM	ENSG00000103353.16	ENST00000395878.8	4745	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	66.210942365208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTCTCTTTTTCCTTCC	23544669	True	NA	14	True	ATTAAA	-14	NA	23557726	23574389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23557768_23557949_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23566986_23567070_23570479
WTC11_00031548	chr16	+	1166	1	FSM	ENSG00000260751.2	ENST00000568262.2	1024	1	-106	-36	-106	36	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTCATGTGTCACGTGCG	NA	False	NA	46	True	NA	NA	NA	23568566	23569732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23568600_23569700
WTC11_00031550	chr16	+	3473	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	-99	-2496	-94	-5	multi-exon	FALSE	canonical	2	10	junction_5	131.825035558501	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAACTGCTTCCTTTTT	23633812	True	NA	33	True	AATAAA	-25	NA	23641371	23669867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
WTC11_00031552	chr16	+	10963	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	-11	2	-11	-2	multi-exon	TRUE	canonical	3	301	junction_5	22.3571017799714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAATTTTTCAAAGTCT	23633895	True	NA	17	True	AATAAA	-29	NA	23641454	23677470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
WTC11_00031555	chr16	+	4157	9	FSM	ENSG00000166851.15	ENST00000562272.5	4135	9	-22	0	-22	0	multi-exon	TRUE	canonical	3	1840	junction_3	153.847682384234	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTGTATTTCCTGA	23677623	False	NA	60	True	ATTAAA	-15	NA	23677633	23690366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
WTC11_00031556	chr16	+	910	3	FSM	ENSG00000166851.15	ENST00000570220.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	949.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGAGGTGGATGTGTGGT	23656602	True	NA	NA	False	AAGAAA	-9	NA	23678868	23681022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23679501_23680083_23680253_23680913
WTC11_00031557	chr16	+	3414	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	-1255	1	-22	0	multi-exon	FALSE	canonical	3	1840	junction_4	147.424640719786	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTGTATTTCCTGA	23677623	False	NA	60	True	ATTAAA	-15	NA	23677633	23690366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
WTC11_00031560	chr16	+	1967	7	FSM	ENSG00000166869.3	ENST00000300113.3	1967	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.42216638714053	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTGTGAATGCATTCG	23754759	False	NA	8	True	AATAAA	-15	NA	23755025	23758935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23755117_23755660_23755734_23755846_23755928_23756062_23756194_23756387_23756450_23757200_23757324_23757529
WTC11_00031563	chr16	+	6881	18	FSM	ENSG00000122257.20	ENST00000319715.10	6858	18	-23	0	-13	0	multi-exon	FALSE	canonical	3	72	junction_16	28.2124907918142	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAGTATTTGCATTATT	24535000	True	NA	14	True	AATAAA	-23	NA	24539542	24572863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24567791_24567894_24568744_24570500_24570875
WTC11_00031564	chr16	+	854	3	FSM	ENSG00000122257.20	ENST00000452655.6	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCATTTTCACGTT	24540446	False	NA	13	True	AATAAA	-17	NA	24540495	24549401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24540793_24546162_24546263_24548944
WTC11_00031567	chr16	+	8488	25	FSM	ENSG00000090905.19	ENST00000395799.8	8491	25	3	0	3	0	multi-exon	FALSE	canonical	1	2	junction_12	81.6190230923867	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGGTTTGGAT	24723191	True	NA	39	True	AATAAA	-16	NA	24729653	24826218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24804704_24804852_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00031569	chr16	+	8333	24	FSM	ENSG00000090905.19	ENST00000315183.11	8303	24	-30	0	14	0	multi-exon	FALSE	canonical	3	37	junction_7	65.966795794915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24723202	True	NA	42	True	AATAAA	-19	NA	24729664	24826221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00031570	chr16	+	7956	22	FSM	ENSG00000090905.19	ENST00000491718.5	7956	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	98.1983507996608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTGGATCTTTGCCTA	24777237	True	NA	48	True	AATAAA	-25	NA	24777247	24826227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24777359_24778343_24778469_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24804704_24804852_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00031581	chr16	+	1383	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	-33	2	-22	0	multi-exon	FALSE	canonical	0	0	junction_2	226.314029613721	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGCCTGTGGTTGGACC	25103804	True	NA	26	True	AATAAA	-14	NA	25111708	25178226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
WTC11_00031582	chr16	+	1551	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	-22	0	-22	0	multi-exon	FALSE	non_canonical	0	0	junction_2	294.230078073224	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	25103804	True	NA	31	True	AATAAA	-19	NA	25111708	25178231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
WTC11_00031583	chr16	+	1053	9	FSM	ENSG00000205629.12	ENST00000380966.8	989	9	-5	-59	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	268.429692843396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCTCCCTGAGCGGTG	25103825	True	NA	NA	False	NA	NA	NA	25111729	25178082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
WTC11_00031587	chr16	+	2746	2	FSM	ENSG00000182601.7	ENST00000331351.6	3267	2	519	2	519	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGAGTTTCGATGGT	25692312	False	NA	20	True	TATAAA	-15	NA	25692477	26137683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25693152_26135611
WTC11_00031588	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.58034844053754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	27202901	True	NA	24	True	AATAGA	-20	NA	27203525	27221768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
WTC11_00031591	chr16	+	556	2	FSM	ENSG00000155666.12	ENST00000569592.1	505	2	-51	0	-51	0	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGCTGCCCAGGAAGGAG	NA	False	NA	NA	False	GGGGCT	-29	NA	27220266	27220902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27220486_27220565
WTC11_00031594	chr16	+	700	6	FSM	ENSG00000077238.14	ENST00000566318.5	688	6	-12	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	40.3058308436881	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTTGTGCTATGTC	27311886	True	NA	NA	False	NA	NA	NA	27313925	27355876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27352539_27352697_27355807
WTC11_00031596	chr16	+	3660	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	-36	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	20.4355083127384	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311898	True	NA	29	True	AATAAA	-18	NA	27313937	27364778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
WTC11_00031598	chr16	+	6624	28	FSM	ENSG00000047578.14	ENST00000261588.10	6599	28	0	-25	0	25	multi-exon	TRUE	canonical	3	11	junction_6	9.31936049896877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	27548894	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
WTC11_00031599	chr16	+	5054	5	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	234.144186346789	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	28288688	True	NA	19	True	AATAAA	-20	NA	28292436	28323849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28322918_28322937
WTC11_00031602	chr16	+	4938	6	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	264.524781447788	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	28288776	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28321183_28321202_28322918_28322945
WTC11_00031603	chr16	+	1168	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	-9	0	-4	0	multi-exon	TRUE	canonical	3	92	junction_1	9.76134983582107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552555	True	NA	5	True	ATTAAA	-16	NA	28553910	28591790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
WTC11_00031605	chr16	+	726	4	FSM	ENSG00000176476.9	ENST00000567447.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	6.79869268479038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	NA	False	NA	5	True	ATTAAA	-16	NA	28590116	28591790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28590443_28590630_28590667_28590772_28590936_28591589
WTC11_00031606	chr16	+	535	2	FSM	ENSG00000176476.9	ENST00000565945.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	28590599	28591788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28590936_28591589
WTC11_00031607	chr16	+	2948	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	-44	6	3	0	multi-exon	TRUE	canonical	3	2240	junction_1	321.704041006637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTCTGGTTGATTG	NA	False	NA	NA	False	ACTAAA	-10	NA	28711419	28735590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
WTC11_00031608	chr16	+	3124	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	13	0	13	0	multi-exon	FALSE	canonical	3	181	junction_1	651.676336458521	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711429	28735727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
WTC11_00031609	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	2418	junction_7	300.301667349255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	28709690	True	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
WTC11_00031610	chr16	+	3957	13	FSM	ENSG00000184110.15	ENST00000565932.5	3957	13	0	0	0	0	multi-exon	FALSE	canonical	3	2604	junction_2	296.760284854066	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGGTTGATTGCTTGT	28719418	False	NA	NA	False	ACTAAA	-15	NA	28721254	28735595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
WTC11_00031612	chr16	+	3820	23	FSM	ENSG00000168488.19	ENST00000340394.12	3807	23	-13	0	0	0	multi-exon	FALSE	canonical	3	167	junction_22	114.271823240801	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822754	False	NA	24	True	AATAAA	-31	NA	28823034	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
WTC11_00031613	chr16	+	4574	21	FSM	ENSG00000168488.19	ENST00000563314.5	4574	21	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	85.6448480645508	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822754	False	NA	24	True	AATAAA	-31	NA	28823034	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835759_28835932
WTC11_00031614	chr16	+	3516	23	FSM	ENSG00000168488.19	ENST00000564304.5	3514	23	-2	0	0	0	multi-exon	FALSE	canonical	3	34	junction_22	167.236952696189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAGGGGCCTCACAGA	28822819	False	NA	NA	False	NA	NA	NA	28823092	28836919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832186_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
WTC11_00031615	chr16	+	3739	23	FSM	ENSG00000168488.19	ENST00000382686.8	3739	23	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_22	130.277516882072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822819	False	NA	24	True	AATAAA	-31	NA	28823092	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
WTC11_00031617	chr16	+	3974	24	FSM	ENSG00000168488.19	ENST00000395547.6	3981	24	0	7	0	-2	multi-exon	FALSE	canonical	3	27	junction_22	163.73558609847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	28822819	False	NA	17	True	AATAAA	-24	NA	28823092	28837230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836491_28836727
WTC11_00031624	chr16	+	3434	23	NIC	ENSG00000168488.19	novel	3635	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_21	134.001696054395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	28825285	False	NA	2	True	AATAAA	-9	NA	28825365	28837215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
WTC11_00031629	chr16	+	3063	18	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	166.609358082588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28829352	False	NA	19	True	AATAAA	-26	NA	28829400	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836486_28836727
WTC11_00031633	chr16	+	1600	9	NIC	ENSG00000168488.19	novel	1933	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	120	junction_7	209.311968124138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	28834052	False	NA	17	True	AATAAA	-24	NA	28834064	28837230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
WTC11_00031634	chr16	+	1933	8	FSM	ENSG00000168488.19	ENST00000562583.5	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	165.210193884231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28834052	False	NA	24	True	AATAAA	-31	NA	28834064	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
WTC11_00031638	chr16	+	770	3	FSM	ENSG00000168488.19	ENST00000564162.1	770	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	316.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28835655	False	NA	24	True	AATAAA	-31	NA	28835668	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28835759_28835932_28836123_28836747
WTC11_00031642	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	39.3279971270429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	28863704	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
WTC11_00031643	chr16	+	6043	9	FSM	ENSG00000178188.15	ENST00000337120.9	6043	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	22.1401784093986	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	NA	False	NA	17	True	AATAAA	-18	NA	28862803	28874201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
WTC11_00031649	chr16	+	842	2	FSM	ENSG00000176953.13	ENST00000565752.5	823	2	-19	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATGCATTTTTTGCAA	28944863	True	NA	NA	False	NA	NA	NA	28950987	28952562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28951399_28952131
WTC11_00031651	chr16	+	4726	3	FSM	ENSG00000176953.13	ENST00000568148.1	1157	3	-755	-2814	-755	1	multi-exon	FALSE	canonical	3	226	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATACTGGAGGATTT	28957590	False	NA	4	True	AATAAA	-17	NA	28957634	28967093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28958862_28958990_28959101_28963704
WTC11_00031654	chr16	+	2211	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	-6	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	64.2088534355203	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970123	True	NA	13	True	AATAAA	-14	NA	28974771	28984543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
WTC11_00031656	chr16	+	1979	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	136.421808088818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	28970123	True	NA	18	True	AATAAA	-19	NA	28974771	28984548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
WTC11_00031658	chr16	+	2027	11	FSM	ENSG00000169682.18	ENST00000334536.12	2027	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	162.500492306947	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGCCTGCTCTCGTC	28970152	True	NA	14	True	AATAAA	-15	NA	28974800	28984544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
WTC11_00031662	chr16	+	589	6	ISM	ENSG00000284671.1	ENST00000566038.1	1611	15	1549	17888	1549	-17888	internal_fragment	FALSE	canonical	2	8	junction_1	59.7407733461829	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTATACTTTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	29076570	29086274	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29076762_29077900_29077958_29084442_29084533_29084638_29084769_29085216_29085277_29086213
WTC11_00031664	chr16	+	255	2	FSM	ENSG00000260335.1	ENST00000569081.1	152	2	7	-110	7	110	multi-exon	FALSE	canonical	3	23	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCCCAGACTCTGATGA	NA	False	NA	NA	False	AATAAA	-18	NA	29449197	29449735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29449238_29449520
WTC11_00031665	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	61.9096115316515	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454500	29458219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
WTC11_00031666	chr16	+	1558	5	FSM	ENSG00000181625.17	ENST00000565219.1	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	66.3941827271034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAGTACAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29454544	29458189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
WTC11_00031667	chr16	+	977	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	-17	-198	0	198	multi-exon	FALSE	canonical	3	38	junction_2	237.075278129121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGACTTACCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	29454544	29458417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
WTC11_00031668	chr16	+	2424	10	FSM	ENSG00000260280.5	ENST00000344620.10	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	202.919798059343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGTAAAAAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	29455104	29464773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29455236_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29464341_29464462
WTC11_00031669	chr16	+	2214	10	FSM	ENSG00000260280.5	ENST00000564950.5	2225	10	0	11	0	-11	multi-exon	FALSE	canonical	3	89	junction_3	179.974140803685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAATATGATTTGTG	NA	False	NA	NA	False	AATAAA	-5	NA	29455156	29464952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29455886_29457631_29457760_29457927_29458016_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
WTC11_00031670	chr16	+	2380	9	FSM	ENSG00000260280.5	ENST00000395400.4	2380	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	153.545392311199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCATGTCTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	29456447	29464663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29457760_29457927_29458016_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
WTC11_00031672	chr16	+	3926	7	ISM	ENSG00000260280.5	ENST00000395400.4	2380	9	2278	-290	2278	-10	3prime_fragment	FALSE	canonical	3	172	junction_3	15.1840559652405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATATGATTTGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	29458725	29464953	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
WTC11_00031677	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	532	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	29667607	True	NA	NA	False	NA	NA	NA	29679007	29697776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29679211_29696995_29697128_29697198
WTC11_00031678	chr16	+	2371	4	NNC	ENSG00000103485.19	novel	2200	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	453.679279765881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29667611	True	NA	17	True	AATAAA	-17	NA	29679011	29698699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_29679211_29694663_29695200_29696992_29697128_29697198
WTC11_00031679	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	116.121583791396	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29667779	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
WTC11_00031680	chr16	+	2882	1	FSM	ENSG00000103485.19	ENST00000564967.1	2199	1	21	-704	21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29695794	False	NA	17	True	AATAAA	-17	NA	29695817	29698699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29695800_29698700
WTC11_00031681	chr16	+	543	2	Genic_Genomic	ENSG00000289181.1	novel	123	1	NA	NA	19	1174	multi-exon	FALSE	canonical	2	21	junction_1	0	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTGGTATTTCTAAGCC	29697466	True	NA	17	True	AATAAA	-26	NA	29709221	29710499	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_+_29709456_29710190
WTC11_00031684	chr16	+	565	4	ISM	ENSG00000079616.14	ENST00000570173.6	572	5	-3	237	0	-237	5prime_fragment	FALSE	canonical	2	2	junction_2	845.664630138134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCCCGTGCTGGTTGGG	29770461	True	NA	NA	False	NA	NA	NA	29790750	29798749	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29790830_29796892_29797094_29798373_29798502_29798592
WTC11_00031685	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	TRUE	canonical	3	1578	junction_8	90.1627719393486	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770461	True	NA	24	True	AATACA	-15	NA	29790750	29805384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
WTC11_00031689	chr16	+	1568	2	ISM	ENSG00000079616.14	ENST00000568312.2	1001	6	631	-1	631	0	intron_retention	FALSE	canonical	3	1787	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTAAATACAGTTTTT	29803383	False	NA	-4	True	NA	NA	NA	29803399	29805356	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29803609_29803997
WTC11_00031691	chr16	+	2835	4	ISM	ENSG00000103495.15	ENST00000568411.5	599	5	-1461	3	208	0	intron_retention	FALSE	canonical	3	669	junction_3	205.404208547169	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTGGCTCTGGATT	29805631	True	NA	7	True	AATAAA	-14	NA	29806313	29811160	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29807829_29808229_29808294_29808569_29808742_29810076
WTC11_00031692	chr16	+	2589	5	FSM	ENSG00000103495.15	ENST00000322945.11	2540	5	0	-49	0	49	multi-exon	FALSE	canonical	3	669	junction_4	194.972273669873	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGGTTTCTTCTCGG	29799421	True	NA	60	True	AATGAA	-27	NA	29806528	29811213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29810076
WTC11_00031693	chr16	+	2717	6	FSM	ENSG00000103495.15	ENST00000219782.10	2698	6	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_5	410.895899225096	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGCCCTCACTAAGAA	29799488	False	NA	30	True	AATAAA	-37	NA	29806595	29811183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29809539_29809765_29810076
WTC11_00031695	chr16	+	635	3	FSM	ENSG00000103495.15	ENST00000567444.5	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	51.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAGATTCCTACAAGAGG	29807315	True	NA	NA	False	NA	NA	NA	29807535	29808847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29807829_29808229_29808294_29808569
WTC11_00031698	chr16	+	2141	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	-677	0	-162	0	multi-exon	FALSE	canonical	3	669	junction_2	239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	29807357	False	NA	-28	True	NA	NA	NA	29807373	29811125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29808294_29808569_29808742_29810076
WTC11_00031700	chr16	+	1313	2	FSM	ENSG00000103495.15	ENST00000565777.1	1313	2	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCATCGTGTTCCTGT	29807634	False	NA	-86	True	NA	NA	NA	29808419	29811067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29808742_29810076
WTC11_00031701	chr16	+	2936	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	-69	0	22	0	multi-exon	FALSE	canonical	3	124	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	29812067	False	NA	-28	True	NA	NA	NA	29812080	29815682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812324_29812989
WTC11_00031703	chr16	+	6857	5	Fusion	ENSG00000280607.1_ENSG00000280893.1_ENSG00000013364.19	novel	2252	6	NA	NA	-70	2484	intron_retention	FALSE	canonical	3	73	junction_2	424.418646503662	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGACCTTACGTCCAACC	29810474	True	NA	106	True	NA	NA	NA	29812190	29822576	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_29812324_29812989_29813934_29814332_29817008_29817209_29817293_29819554
WTC11_00031707	chr16	+	1816	3	FSM	ENSG00000174939.11	ENST00000308748.10	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29900383	False	NA	9	True	TATAAA	-19	NA	29900487	29906056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29901921_29904851_29904966_29905787
WTC11_00031708	chr16	+	2102	5	FSM	ENSG00000174939.11	ENST00000566693.1	1732	5	-370	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	41.3906692383682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29900383	False	NA	76	True	AATAAA	-17	NA	29900487	29919864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
WTC11_00031711	chr16	+	918	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	263	junction_1	219.287391338399	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957465	True	NA	14	True	AATAAA	-16	NA	29962103	29973048	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
WTC11_00031712	chr16	+	1020	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	-7	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	376.069585759515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957465	True	NA	14	True	AATAAA	-16	NA	29962103	29973048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
WTC11_00031713	chr16	+	1013	7	NIC	ENSG00000149932.17	novel	1013	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_5	365.807516173313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957469	True	NA	14	True	AATAAA	-16	NA	29962107	29973048	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
WTC11_00031714	chr16	+	1292	5	FSM	ENSG00000149932.17	ENST00000566848.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	94.3477609697231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGGGAAAATAAAAAGCT	29962665	False	NA	-16	True	AAAAAG	-15	NA	29962676	29973018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
WTC11_00031716	chr16	+	4950	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	-13	0	-13	0	multi-exon	FALSE	canonical	3	91	junction_11	15.1798111538539	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	29969746	True	NA	7	True	AATAAA	-15	NA	29973854	29988393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
WTC11_00031717	chr16	+	4672	19	FSM	ENSG00000149930.18	ENST00000279394.7	4246	19	-426	0	-13	0	multi-exon	FALSE	canonical	3	48	junction_16	26.0566808570077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGACTCACCCTTCTG	29969746	True	NA	15	True	AATAAA	-21	NA	29973854	29992261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264_29986505_29989592_29989806_29990783_29990967_29991046
WTC11_00031726	chr16	+	1157	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	-3	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	52.3789610011076	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986727	True	NA	25	True	ATTAAA	-15	NA	29996237	30005791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
WTC11_00031728	chr16	+	1242	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	90.4492190374787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986732	True	NA	25	True	ATTAAA	-15	NA	29996242	30005791	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
WTC11_00031729	chr16	+	2289	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	34	0	-23	multi-exon	FALSE	canonical	3	8	junction_2	5395.92772594932	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	30053000	True	NA	-13	True	NA	NA	NA	30053150	30070380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031730	chr16	+	1571	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	2581	junction_1	2958.74876161782	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30063996	False	NA	21	True	AATAAA	-18	NA	30064252	30070414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031731	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	3777.50502771009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	30064023	False	NA	18	True	AATAAA	-15	NA	30064496	30070411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031732	chr16	+	1511	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	-12	0	0	0	multi-exon	FALSE	canonical	3	7633	junction_1	1361.86656123581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	29959537	True	NA	-41	True	NA	NA	NA	30065759	30070352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
WTC11_00031733	chr16	+	1464	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	-17	0	0	0	multi-exon	TRUE	canonical	3	704	junction_5	3651.02947596633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	29959537	True	NA	-13	True	NA	NA	NA	30065759	30070380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031734	chr16	+	1486	9	FSM	ENSG00000149925.22	ENST00000643777.4	1486	9	0	0	0	0	multi-exon	FALSE	canonical	3	7633	junction_1	1315.84216734949	1857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031735	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4765.61925037095	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00031738	chr16	+	1101	5	FSM	ENSG00000149923.14	ENST00000568810.5	1080	5	-21	0	2	0	multi-exon	FALSE	canonical	3	2200	junction_1	479.118657015149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATGAGTGCCTGCGCA	30055620	True	NA	NA	False	NA	NA	NA	30075979	30083467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745
WTC11_00031739	chr16	+	899	6	FSM	ENSG00000149923.14	ENST00000567040.5	879	6	-20	0	2	0	multi-exon	FALSE	canonical	3	605	junction_1	1035.38445033717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGACAGCCAGGAGGGG	30055620	True	NA	NA	False	NA	NA	NA	30075979	30083805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393
WTC11_00031741	chr16	+	1420	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	-18	0	-2	0	multi-exon	FALSE	canonical	3	2200	junction_1	376.416574422541	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055616	True	NA	108	True	AATAAA	-15	NA	30075975	30085376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
WTC11_00031747	chr16	+	1348	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	-47	0	-2	0	multi-exon	FALSE	canonical	3	203	junction_2	1053.07948805551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	30055616	True	NA	88	True	GATAAA	-30	NA	30075975	30085356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
WTC11_00031748	chr16	+	1502	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	-12	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	1072.82540954948	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	30055645	True	NA	103	True	AATAAA	-10	NA	30076004	30085371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
WTC11_00031749	chr16	+	1395	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	605	junction_1	866.605076938163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055647	True	NA	108	True	AATAAA	-15	NA	30076006	30085376	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
WTC11_00031755	chr16	+	1133	6	FSM	ENSG00000132207.18	ENST00000251303.11	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_2	56.4283616632629	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30193874	30197561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
WTC11_00031758	chr16	+	2438	10	FSM	ENSG00000213599.10	ENST00000569959.5	2424	10	-14	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	204.443659418783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGTAAAAAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	30194432	30204118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194578_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30203686_30203807
WTC11_00031760	chr16	+	2195	11	FSM	ENSG00000213599.10	ENST00000565342.5	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	180.926532050996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGATTTGTGTTCAT	NA	False	NA	2	True	AATAAA	-14	NA	30194432	30204306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
WTC11_00031762	chr16	+	3935	7	ISM	ENSG00000213599.10	ENST00000566712.2	2380	9	2278	-298	2278	0	3prime_fragment	FALSE	canonical	3	173	junction_3	15.0526852532475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGATTTGTGTTCAT	NA	False	NA	2	True	AATAAA	-14	NA	30198067	30204306	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
WTC11_00031763	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.314891693851	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30199254	30204310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
WTC11_00031765	chr16	+	301	2	FSM	ENSG00000180209.12	ENST00000563728.1	336	2	35	0	35	0	multi-exon	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	30377546	False	NA	23	True	AATAAA	-24	NA	30377597	30377991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30377703_30377795
WTC11_00031766	chr16	+	3588	2	FSM	ENSG00000180035.13	ENST00000320159.2	3234	2	-354	0	-354	0	multi-exon	FALSE	canonical	3	211	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	30395013	True	NA	22	True	AATAAA	-18	NA	30395064	30400108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30395874_30397329
WTC11_00031767	chr16	+	3033	3	FSM	ENSG00000180035.13	ENST00000613509.2	3032	3	-1	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	59	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	30393854	True	NA	22	True	AATAAA	-18	NA	30395418	30400108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30395579_30395779_30395874_30397329
WTC11_00031770	chr16	+	416	1	FSM	ENSG00000278922.1	ENST00000624451.1	1377	1	-122	1083	-122	-1083	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCGAGGTCCTTGAGCC	NA	False	NA	NA	False	NA	NA	NA	30526795	30527211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30526800_30527200
WTC11_00031771	chr16	+	1445	2	FSM	ENSG00000235560.4	ENST00000457283.3	1445	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACATGCTTCCACTT	30534722	False	NA	NA	False	GATAAA	-16	NA	30534751	30537144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30535481_30536428
WTC11_00031772	chr16	+	2616	11	FSM	ENSG00000156858.12	ENST00000542965.2	2316	11	-305	5	-51	0	multi-exon	FALSE	canonical	3	57	junction_6	10.2102889283311	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTCTTTTGTATCTCT	30650581	False	NA	23	True	AGTAAA	-15	NA	30650884	30656408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
WTC11_00031773	chr16	+	600	4	FSM	ENSG00000156858.12	ENST00000565410.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	15.4344492037203	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATCTTCCTGTTCCC	30650632	False	NA	NA	False	NA	NA	NA	30650935	30652886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720
WTC11_00031774	chr16	+	2102	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	-24	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.5408423669516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650632	False	NA	28	True	AGTAAA	-20	NA	30650935	30656413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
WTC11_00031776	chr16	+	692	3	FSM	ENSG00000156858.12	ENST00000567989.1	902	3	210	0	210	0	multi-exon	FALSE	canonical	3	75	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTCTTTTGTATCTCT	30655297	False	NA	23	True	AGTAAA	-15	NA	30655350	30656408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30655594_30655867_30655940_30656031
WTC11_00031785	chr16	+	5937	18	FSM	ENSG00000080603.17	ENST00000483083.3	5937	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	16.2193015862162	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGGAAACGTGTGTTA	30709849	False	NA	NA	False	NA	NA	NA	30709895	30726262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30721188_30721477_30722121_30722287_30722562_30722749_30722962_30723230_30723583
WTC11_00031791	chr16	+	1771	9	ISM	ENSG00000156873.16	ENST00000424889.7	1566	11	240	3026	-12	0	internal_fragment	FALSE	canonical	3	238	junction_5	25.2236867844493	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	30748339	True	NA	22	True	AATAAA	-23	NA	30748538	30757365	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
WTC11_00031797	chr16	+	5783	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	0	403	intron_retention	FALSE	canonical	3	34	junction_1	46.9309034143906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACATTTCCCATGAGG	30756699	True	NA	NA	False	NA	NA	NA	30762288	30776710	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30762399_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
WTC11_00031798	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.4374032024449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756732	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
WTC11_00031799	chr16	+	5385	19	FSM	ENSG00000103549.22	ENST00000493683.5	5371	19	-14	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.8139451465275	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756732	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769601_30771832_30771974_30772088_30772191_30773937
WTC11_00031804	chr16	+	4209	11	NIC	ENSG00000099364.18	novel	4490	11	NA	NA	152	0	combination_of_known_junctions	TRUE	canonical	2	2	junction_1	4.83321838943783	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	30922345	False	NA	36	True	TATAAA	-22	NA	30923723	30948783	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30924460_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928500_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
WTC11_00031806	chr16	+	2209	2	FSM	ENSG00000175938.7	ENST00000318663.5	2204	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	59	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTTGCTGTGAAGG	30947853	True	NA	28	True	AATAAA	-15	NA	30949062	30954938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30949518_30953184
WTC11_00031807	chr16	+	3888	11	NIC	ENSG00000099381.19	novel	5991	19	NA	NA	7375	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10.3058235963944	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	30965655	False	NA	16	True	ATTAAA	-16	NA	30965670	30984664	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30966387_30966883_30967061_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
WTC11_00031808	chr16	+	716	2	FSM	ENSG00000099381.19	ENST00000640410.1	718	2	0	2	0	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTGGGCTGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	30980052	30980849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30980658_30980738
WTC11_00031809	chr16	+	2179	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	7	junction_1	6.89605362185907	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	30984799	True	NA	14	True	ATTAAA	-15	NA	30985198	30989147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
WTC11_00031818	chr16	+	8341	2	FSM	ENSG00000167395.10	ENST00000564189.1	582	2	-1	-7758	0	50	multi-exon	FALSE	canonical	3	6	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTTGGCAAGCATCTCC	31072926	True	NA	NA	False	NA	NA	NA	31074421	31084246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31074762_31076245
WTC11_00031819	chr16	+	6892	3	FSM	ENSG00000167395.10	ENST00000300850.5	6892	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAGTCCTCATAGGCA	31072926	True	NA	NA	False	NA	NA	NA	31074421	31084196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31074632_31076245_31081702_31082970
WTC11_00031820	chr16	+	2218	1	FSM	ENSG00000280160.1	ENST00000624508.1	2218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCCCAGTCTCTACTTC	NA	False	NA	NA	False	NA	NA	NA	31093726	31095944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31093700_31095900
WTC11_00031823	chr16	+	2053	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	-17	0	-17	0	multi-exon	FALSE	canonical	3	567	junction_11	55.9756440541127	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	31101417	True	NA	12	True	NA	NA	NA	31108368	31112791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
WTC11_00031828	chr16	+	1825	15	FSM	ENSG00000089280.19	ENST00000254108.12	1824	15	-1	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_3	434.220107826453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCCTCTTCCCCCTT	31103902	True	NA	30	True	ATTAAA	-20	NA	31180137	31191605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
WTC11_00031829	chr16	+	1819	15	FSM	ENSG00000089280.19	ENST00000380244.7	1818	15	-1	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	519.856495112069	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103902	True	NA	27	True	ATTAAA	-17	NA	31180137	31191602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183860_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
WTC11_00031830	chr16	+	4932	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	-12	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_3	462.568463401185	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103902	True	NA	27	True	ATTAAA	-17	NA	31180137	31191602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
WTC11_00031834	chr16	+	639	4	FSM	ENSG00000089280.19	ENST00000569760.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	2204	junction_1	310.936578027667	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCCTCTTCCCCCTT	31190001	False	NA	30	True	ATTAAA	-20	NA	31190215	31191605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31190399_31190741_31190843_31190962_31191111_31191398
WTC11_00031837	chr16	+	4844	4	FSM	ENSG00000140691.18	ENST00000457010.6	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	4.54606056566195	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTGGTGTGT	31458778	False	NA	5	True	ATTAAA	-17	NA	31458823	31467166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393
WTC11_00031838	chr16	+	3549	7	FSM	ENSG00000140691.18	ENST00000563544.5	3549	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.5916656628925	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAGAACAGCCCAGA	31458806	False	NA	-77	True	NA	NA	NA	31458851	31467084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31459341_31459467_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
WTC11_00031839	chr16	+	3108	6	FSM	ENSG00000140691.18	ENST00000268314.9	3108	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	5.6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	31458541	True	NA	4	True	ATTAAA	-16	NA	31459500	31467165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
WTC11_00031841	chr16	+	1770	10	FSM	ENSG00000140682.19	ENST00000567607.5	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	7.32491098837756	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	31473412	False	NA	6	True	CATAAA	-18	NA	31473425	31477958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
WTC11_00031842	chr16	+	6116	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	-4545	5	-4	multi-exon	TRUE	canonical	3	10	junction_1	5.01426536422407	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGCTGCCCCAGTCT	31700006	True	NA	3	True	AATAAA	-11	NA	31700634	31711982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
WTC11_00031843	chr16	+	1233	4	FSM	ENSG00000197302.11	ENST00000529943.6	1214	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	11	junction_1	44.3045019031801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCATTGCAAACGTAAAA	NA	False	NA	NA	False	NA	NA	NA	31713209	31754536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765
WTC11_00031844	chr16	+	6010	5	FSM	ENSG00000197302.11	ENST00000534277.5	5994	5	-16	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	41.9791614971047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGCACCAGAATCCT	31710572	True	NA	9	True	AATAAA	-14	NA	31713228	31759886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765_31753901_31754454
WTC11_00031845	chr16	+	2793	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-34	0	-19	0	multi-exon	FALSE	canonical	3	80	junction_4	10.7325439668328	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	NA	False	NA	4	True	AATAAA	-14	NA	31713209	31761565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
WTC11_00031849	chr16	+	1055	5	NIC	ENSG00000197302.11	novel	5994	5	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	38.477266015142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATATTTGCACCAGAA	31710621	True	NA	5	True	AATAAA	-10	NA	31713277	31759882	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765_31753901_31759356
WTC11_00031852	chr16	+	3085	5	NNC	ENSG00000185947.15	novel	563	5	NA	NA	-30	-45	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	45.5439348322035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGAGCTCTTTTCTAT	31870901	True	NA	27	True	AATAAA	-26	NA	31873776	31917312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475_31916181_31916348
WTC11_00031854	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	22.2161102706022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	31870931	True	NA	72	True	ATTAAA	-20	NA	31873806	31917357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
WTC11_00031857	chr16	+	3401	5	FSM	ENSG00000091651.9	ENST00000563306.5	1190	5	-45	-2166	-6	0	multi-exon	FALSE	canonical	3	35	junction_1	180.14768247191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGCATTCAAGTTGTA	46680568	True	NA	11	True	AATAAA	-9	NA	46689636	46698385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561
WTC11_00031858	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	35.8767179224757	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680590	True	NA	20	True	AATAAA	-18	NA	46689658	46698394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
WTC11_00031859	chr16	+	561	5	FSM	ENSG00000091651.9	ENST00000570260.2	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	197.42910119838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACTCTACTTTTGAAAC	46680638	True	NA	NA	False	AAAACA	-10	NA	46689706	46695051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46694938
WTC11_00031860	chr16	+	1686	6	FSM	ENSG00000091651.9	ENST00000566860.1	1699	6	13	0	13	0	multi-exon	FALSE	canonical	3	399	junction_3	38.9840993226726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGCATTCAAGTTGTA	46690786	False	NA	11	True	AATAAA	-9	NA	46690798	46698385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
WTC11_00031861	chr16	+	2139	3	FSM	ENSG00000091651.9	ENST00000567000.2	1560	3	-579	0	-407	0	multi-exon	FALSE	canonical	3	494	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATATGCATTCAAGTT	46694508	False	NA	8	True	AATAAA	-6	NA	46694529	46698382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46695675_46696016_46696086_46697457
WTC11_00031863	chr16	+	3992	12	FSM	ENSG00000166123.14	ENST00000340124.9	3992	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.464115706484	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTTTAACTTTCATTGT	46875889	True	NA	16	True	AATAAA	-17	NA	46884361	46931289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683_46909928_46916627_46916708_46918620_46918758_46922241_46922417_46924388_46924545_46926924_46927038_46928906
WTC11_00031866	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	36.3207471032092	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	47457737	True	NA	10	True	AATAAA	-16	NA	47461294	47699745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
WTC11_00031867	chr16	+	5559	32	NIC	ENSG00000102893.16	novel	5464	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	27.3252274301661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCCAATGCCTGTTTT	47457768	True	NA	5	True	AGTAAA	-19	NA	47461325	47701523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
WTC11_00031886	chr16	+	4198	15	FSM	ENSG00000155393.14	ENST00000299192.8	4416	15	-3	221	0	-221	multi-exon	FALSE	canonical	3	25	junction_1	8.59757915618919	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACGACTCTTCCAAAAAA	50063664	True	NA	NA	False	NA	NA	NA	50065966	50107051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50066270_50066366_50066540_50068779_50068868_50070177_50070291_50072604_50072715_50075570_50075712_50078740_50079019_50083936_50084028_50084133_50084292_50084568_50084652_50086214_50086352_50094704_50094794_50100229_50100374_50102258_50102436_50104938
WTC11_00031888	chr16	+	7852	12	FSM	ENSG00000121274.14	ENST00000561678.7	8440	12	0	588	0	-584	multi-exon	FALSE	canonical	3	20	junction_1	6.40764006789313	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAAGCAGCACTGCCT	50153096	True	NA	NA	False	NA	NA	NA	50153305	50234722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50154260_50211322_50211447_50214220_50214268_50216074_50216196_50217555_50217664_50222305_50222435_50223173_50223388_50224656_50224784_50224890_50224995_50225097_50225286_50227838_50228004_50229151
WTC11_00031890	chr16	+	6254	10	FSM	ENSG00000140807.7	ENST00000268459.6	17039	10	9	10776	9	5251	multi-exon	FALSE	canonical	3	15	junction_9	4.00308522992263	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGGCCTCATTTTGC	50547627	True	NA	NA	False	NA	NA	NA	50548404	50638473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50548579_50548716_50548750_50549421_50549556_50608293_50608361_50621601_50621709_50625484_50625581_50630185_50630334_50630825_50630911_50632280_50632409_50633191
WTC11_00031891	chr16	+	3365	1	FSM	ENSG00000278909.1	ENST00000623140.1	3365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	50554577	False	NA	NA	False	NA	NA	NA	50555354	50558719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50555400_50558700
WTC11_00031893	chr16	+	3498	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	15	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	13.8148909178706	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	50740739	True	NA	3	True	AATAAA	-17	NA	50742064	50796881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
WTC11_00031896	chr16	+	3545	18	FSM	ENSG00000083799.18	ENST00000398568.6	3536	18	-10	1	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12.2607201874756	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	50740784	True	NA	3	True	AATAAA	-17	NA	50742109	50796881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50742217_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
WTC11_00031897	chr16	+	8903	18	Fusion	ENSG00000264947.1_ENSG00000083799.18	novel	3292	14	NA	NA	-73	-15	intron_retention	FALSE	canonical	2	3	junction_1	15.2356347906495	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACATTTTTATGGTTC	50740906	False	NA	-12	True	AAGAAA	-28	NA	50742231	50801915	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_50742663_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
WTC11_00031901	chr16	+	1190	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	11	-481	11	283	multi-exon	FALSE	canonical	3	15	junction_1	0	3708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTCATATGTTAGATTC	53054271	True	NA	NA	False	ATTAAA	-21	NA	53055049	53122461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53055078_53121299
WTC11_00031902	chr16	+	2896	16	FSM	ENSG00000177200.18	ENST00000564255.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	7.29566081082904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTATGAAATATCTGTG	NA	False	NA	NA	False	NA	NA	NA	53157163	53250175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870
WTC11_00031903	chr16	+	701	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	2	0	2	0	multi-exon	FALSE	canonical	1	3	junction_1	12	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	53206377	True	NA	NA	False	ATTAAA	-17	NA	53208452	53222755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53208710_53209481_53209814_53222643
WTC11_00031904	chr16	+	1202	6	FSM	ENSG00000177200.18	ENST00000569225.5	1862	6	0	660	0	-660	multi-exon	FALSE	canonical	3	14	junction_4	6.40624695121879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATACTGAATTTAC	NA	False	NA	NA	False	CATAAA	-3	NA	53235136	53247503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292
WTC11_00031905	chr16	+	789	4	FSM	ENSG00000177200.18	ENST00000565119.1	824	4	0	35	0	-35	multi-exon	FALSE	canonical	2	2	junction_3	12.2565175405668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTATGCTTTTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	53245732	53250614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53245851_53247292_53247504_53249870_53250067_53250350
WTC11_00031917	chr16	+	927	2	FSM	ENSG00000087258.16	ENST00000569295.6	930	2	0	3	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTCTCCAGGCCTGT	56189951	False	NA	NA	False	TTTAAA	-26	NA	56191546	56192693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56192354_56192573
WTC11_00031918	chr16	+	5767	8	FSM	ENSG00000087258.16	ENST00000262494.12	5767	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	2.9623487647611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGAGTGTGATGTGTTGT	56191737	False	NA	7	True	AATAAA	-18	NA	56191782	56348199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56192354_56192573_56192617_56275930_56276073_56328630_56328792_56334728_56334858_56336730_56336861_56340833_56340988_56343762
WTC11_00031927	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	28	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	56650422	True	NA	15	True	ATTAAA	-15	NA	56657958	56659303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56658087_56658674_56658741_56659072
WTC11_00031930	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_2	272	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666575	True	NA	18	True	AATAAA	-14	NA	56682469	56684196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56682569_56683164_56683231_56683957
WTC11_00031943	chr16	+	1867	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	-5	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	89.3683046585926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929751	True	NA	22	True	AATAAA	-22	NA	56932141	56943881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
WTC11_00031945	chr16	+	1800	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	-18	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	105.454044756735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	56929751	True	NA	27	True	AATAAA	-27	NA	56932141	56943886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
WTC11_00031954	chr16	+	455	3	FSM	ENSG00000140853.17	ENST00000538273.5	560	3	0	105	0	71	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGCAGGTGTGAGAGA	56989521	True	NA	NA	False	NA	NA	NA	56989562	57021007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56989596_57017073_57017189_57020700
WTC11_00031965	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	12.0233106921513	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	57243959	True	NA	49	True	AGTAAA	-35	NA	57245258	57253635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
WTC11_00031966	chr16	+	1045	5	FSM	ENSG00000088682.14	ENST00000568790.5	1027	5	-18	0	-15	0	multi-exon	FALSE	canonical	3	215	junction_4	37.9901302972233	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCAATGTGATGCTTG	57443494	True	NA	NA	False	NA	NA	NA	57447463	57457412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930
WTC11_00031968	chr16	+	1645	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5730799099486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	57443494	True	NA	10	True	AATAAA	-17	NA	57447463	57461270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
WTC11_00031969	chr16	+	1509	8	NIC	ENSG00000088682.14	novel	1630	9	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	90.8625335328044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCATTGTGTAGTTAGT	57443523	True	NA	8	True	AATAAA	-15	NA	57447492	57461268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57459564_57459721_57460050_57460105_57460588
WTC11_00031971	chr16	+	1118	4	FSM	ENSG00000088682.14	ENST00000569980.1	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	10.8012344973464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	NA	False	NA	10	True	AATAAA	-17	NA	57458124	57461270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57458351_57459564_57459721_57460050_57460105_57460588
WTC11_00031974	chr16	+	2642	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	-24	0	7	0	multi-exon	FALSE	canonical	0	0	junction_16	87.8536304759891	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57730964	True	NA	11	True	ATTAAA	-13	NA	57735745	57757244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
WTC11_00031975	chr16	+	2655	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_16	87.8536304759891	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57731002	True	NA	11	True	ATTAAA	-13	NA	57735783	57757244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
WTC11_00031984	chr16	+	1775	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	-24	0	-9	0	multi-exon	TRUE	canonical	1	2	junction_3	213.729319987273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	57993417	True	NA	7	True	AATAAA	-27	NA	58001395	58013558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
WTC11_00031988	chr16	+	2171	8	NNC	ENSG00000103005.12	novel	2248	7	NA	NA	1	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	160.811208869156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTTGGACTACTTG	57993443	True	NA	22	True	AATAAA	-20	NA	58001421	58021616	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140_58020539_58020598
WTC11_00031989	chr16	+	2541	1	FSM	ENSG00000103005.12	ENST00000624720.1	2895	1	355	-1	355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	58010993	False	NA	7	True	AATAAA	-27	NA	58011017	58013558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58011000_58013600
WTC11_00031991	chr16	+	3821	3	FSM	ENSG00000103005.12	ENST00000566082.1	3888	3	66	1	66	-1	multi-exon	FALSE	canonical	3	467	junction_2	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTTGGACTACTTG	58015154	False	NA	22	True	AATAAA	-20	NA	58015178	58021616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58017440_58018971_58019056_58020140
WTC11_00031992	chr16	+	4062	10	FSM	ENSG00000102996.5	ENST00000219271.4	4062	10	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	30.4087381853422	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	58023500	True	NA	16	True	AATAAA	-17	NA	58025753	58046901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006
WTC11_00031995	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	58391140	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58392788_58404498
WTC11_00031996	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	58391217	True	NA	18	True	AATACA	-22	NA	58392470	58406147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58392788_58403097_58403332_58404498
WTC11_00032025	chr16	+	2159	6	FSM	ENSG00000140931.20	ENST00000361909.8	2159	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	94.0097867245746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTTCCCTAACCTT	66604265	True	NA	27	True	AATACA	-24	NA	66604275	66613892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66604556_66604730_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
WTC11_00032026	chr16	+	1950	5	FSM	ENSG00000140931.20	ENST00000567572.6	1901	5	-47	-2	-47	2	multi-exon	FALSE	canonical	3	227	junction_4	8.52569645248997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTTTATTTCCCTAAC	66602312	True	NA	24	True	AATACA	-21	NA	66604656	66613889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
WTC11_00032027	chr16	+	1851	4	FSM	ENSG00000140931.20	ENST00000564060.5	824	4	-69	-958	-41	0	multi-exon	FALSE	canonical	3	13	junction_2	102.324103818319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTTCCCTAACCTT	66602318	True	NA	27	True	AATACA	-24	NA	66604662	66613892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66604953_66608308_66608465_66609882_66610004_66612608
WTC11_00032029	chr16	+	366	2	FSM	ENSG00000172840.7	ENST00000568398.1	362	2	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTATGTCTCAAATAGG	66875768	True	NA	NA	False	NA	NA	NA	66880526	66884366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66880757_66884230
WTC11_00032030	chr16	+	566	3	FSM	ENSG00000172840.7	ENST00000561704.1	574	3	8	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTTGCGGTTTGAG	66875768	True	NA	NA	False	NA	NA	NA	66880526	66884594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66880641_66883014_66883103_66884230
WTC11_00032040	chr16	+	3161	6	FSM	ENSG00000067955.15	ENST00000412916.7	3103	6	-58	0	-25	0	multi-exon	FALSE	canonical	3	299	junction_5	122.18739705878	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67029058	False	NA	72	True	AATAAA	-18	NA	67029090	67101058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
WTC11_00032042	chr16	+	3177	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	-43	0	-10	0	multi-exon	FALSE	canonical	3	337	junction_5	107.919229055808	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67025967	True	NA	72	True	AATAAA	-18	NA	67029105	67101058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
WTC11_00032045	chr16	+	2917	16	FSM	ENSG00000125149.12	ENST00000219139.8	2917	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	16.416252109825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107437	True	NA	14	True	NA	NA	NA	67109940	67148544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
WTC11_00032053	chr16	+	2627	8	FSM	ENSG00000205250.9	ENST00000567007.5	2615	8	-12	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	349.192479522544	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	67186500	True	NA	20	True	AATAAA	-17	NA	67192172	67198917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
WTC11_00032060	chr16	+	2522	20	FSM	ENSG00000102890.16	ENST00000652269.1	2511	20	-11	0	3	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4375448049695	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCGGGCTGAGCCTGT	67198072	True	NA	25	True	AATAAA	-39	NA	67199113	67204023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
WTC11_00032061	chr16	+	2281	19	FSM	ENSG00000102890.16	ENST00000477898.5	2281	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	11.4060845793856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGAGCCTGTGACAGT	67199439	True	NA	31	True	AATAAA	-45	NA	67199508	67204029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
WTC11_00032071	chr16	+	5412	20	FSM	ENSG00000196155.13	ENST00000563969.5	6949	20	1537	0	-100	0	multi-exon	FALSE	canonical	3	20	junction_4	7.01324429689049	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGATGGGCACATGC	67278962	False	NA	15	True	AATAAA	-17	NA	67279046	67289479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
WTC11_00032076	chr16	+	4152	22	FSM	ENSG00000039523.20	ENST00000428437.6	4152	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	10.2693873945975	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGGTACACTCCTGAC	67537317	True	NA	16	True	AATAAA	-23	NA	67537453	67546788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67537598_67538423_67538551_67538671_67538825_67538989_67539069_67539727_67539752_67539845_67539900_67540052_67540206_67540299_67540364_67540457_67540502_67540578_67540705_67541429_67541579_67541652_67541783_67541866_67543265_67543347_67543470_67544298_67544432_67544694_67544831_67544955_67545118_67545375_67545535_67545663_67545861_67545948_67546033_67546140_67546232_67546365
WTC11_00032078	chr16	+	3814	12	FSM	ENSG00000102974.16	ENST00000264010.10	3814	12	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	42.7090870389719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGACTCCATCTTGCG	67553596	True	NA	13	True	AATAAA	-22	NA	67562525	67639177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
WTC11_00032082	chr16	+	3975	11	FSM	ENSG00000102974.16	ENST00000642819.1	3975	11	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	39.5418765361484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTAACAAGTGCTCCAA	67570747	False	NA	-2	True	AATAAA	-7	NA	67570772	67639162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
WTC11_00032087	chr16	+	4462	38	FSM	ENSG00000159753.14	ENST00000334583.11	4462	38	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_2	31.9879908071796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTGGAGCGGTATC	67645097	True	NA	12	True	ATTAAA	-14	NA	67645143	67657569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67645287_67645539_67645632_67645723_67645778_67646017_67646081_67646185_67646311_67646425_67646518_67646713_67646785_67646899_67646974_67647115_67647192_67647298_67647388_67647507_67647603_67647679_67647767_67647845_67647959_67648051_67648315_67648397_67648503_67648684_67648755_67648892_67648975_67649075_67649173_67649253_67649312_67649446_67649620_67649805_67649969_67650048_67650151_67651186_67651316_67651400_67651515_67651684_67651846_67651920_67652009_67652198_67652340_67652471_67652539_67653018_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67656800_67656882_67657238_67657317_67657405
WTC11_00032099	chr16	+	485	4	FSM	ENSG00000102898.12	ENST00000568233.5	589	4	-12	116	0	-19	multi-exon	FALSE	canonical	3	1872	junction_1	303.32637354653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTAGTTCAGTATGCTAG	67832389	True	NA	NA	False	NA	NA	NA	67846922	67868722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500
WTC11_00032100	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	1064.80338560694	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	67847041	False	NA	27	True	AATAAA	-29	NA	67847160	67871323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
WTC11_00032107	chr16	+	3907	1	FSM	ENSG00000263126.1	ENST00000572067.1	3907	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGCTCCTTCCTTTCTC	67882449	False	NA	27	True	ATTAAA	-16	NA	67882460	67886367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67882500_67886400
WTC11_00032109	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884151	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67884983_67885721_67885855_67885973
WTC11_00032110	chr16	+	573	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	44.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884180	False	NA	28	True	ATTAAA	-17	NA	67884913	67886368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_67884983_67885745_67885855_67885973
WTC11_00032111	chr16	+	574	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	43.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884182	False	NA	28	True	ATTAAA	-17	NA	67884915	67886368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_67884983_67885742_67885855_67885973
WTC11_00032113	chr16	+	1950	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	-17	0	-17	0	multi-exon	FALSE	canonical	3	81	junction_1	27.0970273072322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021282	True	NA	14	True	CATAAA	-1	NA	68023235	68079320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
WTC11_00032115	chr16	+	2001	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	-24	5	-1	0	multi-exon	FALSE	canonical	3	118	junction_1	20.8172854858649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGGGCTTGTGTCCTG	68021306	True	NA	9	True	NA	NA	NA	68023259	68079315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
WTC11_00032122	chr16	+	6419	11	FSM	ENSG00000072736.19	ENST00000349223.9	6328	11	-91	0	1	0	multi-exon	FALSE	canonical	3	16	junction_9	35.6775839989201	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTAATCTGTCTGAGTG	68083852	True	NA	9	True	AATAAA	-19	NA	68085366	68229258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68221195_68221285_68226349
WTC11_00032125	chr16	+	6144	11	FSM	ENSG00000072736.19	ENST00000329524.8	6144	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	35.6691743666713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAATCTGTCTGAGTGT	68084143	False	NA	10	True	AATAAA	-20	NA	68085657	68229259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68214328_68214433_68226349
WTC11_00032134	chr16	+	3772	20	FSM	ENSG00000132600.18	ENST00000675132.1	3753	20	-19	0	7	0	multi-exon	FALSE	canonical	0	0	junction_18	97.1300068318067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCATGAAGATACAATAC	68306684	True	NA	-40	True	NA	NA	NA	68310999	68358524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356140_68356216_68356700_68356798_68357053
WTC11_00032140	chr16	+	1737	11	FSM	ENSG00000132600.18	ENST00000565356.5	1723	11	-14	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	74.9143510951006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATAAATTAAGCGT	68306734	True	NA	-22	True	NA	NA	NA	68311049	68352660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247
WTC11_00032141	chr16	+	2287	18	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	43.8194628985765	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	68306684	True	NA	-5	True	AATAAA	-8	NA	68310999	68357249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00032142	chr16	+	2148	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	34	1234	-1	0	multi-exon	FALSE	canonical	3	43	junction_1	86.9478515484361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306746	True	NA	5	True	AATAAA	-18	NA	68311061	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00032143	chr16	+	2137	17	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	72.5021282015225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306747	True	NA	5	True	AATAAA	-18	NA	68311062	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68357053
WTC11_00032144	chr16	+	2338	18	NIC	ENSG00000132600.18	novel	2972	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	79.5158359453635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306752	True	NA	5	True	AATAAA	-18	NA	68311067	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311112_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353394_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00032145	chr16	+	1949	15	NIC	ENSG00000132600.18	novel	4265	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	105.938781898812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306779	True	NA	5	True	AATAAA	-18	NA	68311094	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311112_68312041_68312177_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00032147	chr16	+	2931	17	FSM	ENSG00000132600.18	ENST00000568975.5	2996	17	65	0	65	0	multi-exon	FALSE	canonical	3	36	junction_13	63.6823170118676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68310944	False	NA	5	True	AATAAA	-18	NA	68315259	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353394_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00032152	chr16	+	3616	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	26	junction_15	221.825597160372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	68644977	False	NA	13	True	ATTAAA	-13	NA	68644987	68699036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
WTC11_00032154	chr16	+	4461	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	-9	0	0	0	multi-exon	FALSE	canonical	3	800	junction_9	56.7217771230768	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	68629430	True	NA	5	True	AATAAA	-16	NA	68645300	68700292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
WTC11_00032155	chr16	+	330	1	FSM	ENSG00000261395.3	ENST00000561489.3	272	1	91	-149	91	149	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGGTGTGGTGGCACA	68686472	False	NA	NA	False	AATAAA	-29	NA	68686489	68686819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68686500_68686800
WTC11_00032156	chr16	+	4158	15	FSM	ENSG00000039068.20	ENST00000566612.5	4138	15	-20	0	0	0	multi-exon	TRUE	canonical	3	6	junction_10	290.696112103063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTTTGATGATGTC	68708067	True	NA	NA	False	NA	NA	NA	68737291	68835030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
WTC11_00032157	chr16	+	4811	16	FSM	ENSG00000039068.20	ENST00000261769.10	4811	16	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_10	57.8682027445893	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAAATTTGTTTTA	68708067	True	NA	13	True	ATTAAA	-14	NA	68737291	68835537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68819279_68819426_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
WTC11_00032165	chr16	+	4284	5	NIC	ENSG00000103044.11	novel	900	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	34.2810078614967	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69103951	False	NA	14	True	AATAAA	-22	NA	69106232	69117660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_69106317_69106571_69106716_69109395_69110032_69113440_69113543_69114342
WTC11_00032166	chr16	+	4249	4	FSM	ENSG00000103044.11	ENST00000566118.5	900	4	-86	-3263	-86	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4722086720835	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69106512	False	NA	14	True	AATAAA	-22	NA	69106522	69117660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69106716_69109395_69110032_69113440_69113543_69114342
WTC11_00032170	chr16	+	4161	15	FSM	ENSG00000141076.18	ENST00000563094.5	4183	15	-12	34	0	-34	multi-exon	FALSE	canonical	3	787	junction_8	87.4499273637112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTGGGCAACATAGTGA	69124611	True	NA	NA	False	NA	NA	NA	69132645	69167808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340
WTC11_00032171	chr16	+	2191	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	-3	0	0	0	multi-exon	FALSE	canonical	3	787	junction_8	88.5465758442979	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124611	True	NA	NA	False	AATAAA	-16	NA	69132645	69169021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
WTC11_00032177	chr16	+	4128	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	-22	0	-22	0	multi-exon	FALSE	canonical	3	442	junction_6	31.3949040450835	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	69302721	True	NA	NA	False	AATAAA	-19	NA	69311327	69326939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
WTC11_00032179	chr16	+	2329	2	FSM	ENSG00000132612.16	ENST00000566354.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATCTCATCTTTCCTT	69321197	False	NA	25	True	AATAAA	-25	NA	69321210	69325046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69322701_69324207
WTC11_00032191	chr16	+	4579	25	NIC	ENSG00000198373.13	novel	4487	24	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_2	40.6215383140521	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGTGTTGTTGTGGA	69757580	True	NA	22	True	AATAAA	-13	NA	69762291	69941738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_69762392_69776188_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
WTC11_00032192	chr16	+	2474	9	FSM	ENSG00000198373.13	ENST00000569174.5	2474	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	52.9963147303659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	NA	False	NA	2	True	AATAAA	-13	NA	69776186	69910250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
WTC11_00032204	chr16	+	1710	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	-18	0	-2	0	multi-exon	FALSE	canonical	3	22	junction_4	174.669087133356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	70292662	True	NA	11	True	AATACA	-16	NA	70299175	70333823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
WTC11_00032205	chr16	+	1714	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	3	0	3	0	multi-exon	FALSE	canonical	3	35	junction_1	178.773599840692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	70292651	True	NA	14	True	AATACA	-19	NA	70299164	70333826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
WTC11_00032207	chr16	+	3282	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	-21	14	3	-14	multi-exon	FALSE	canonical	3	275	junction_1	131.601389125779	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTAGGCCACAGGCA	70292651	True	NA	82	True	ATTAAA	-12	NA	70299164	70335291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
WTC11_00032212	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	117.286750394841	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	70340812	True	NA	16	True	AATATA	-18	NA	70346902	70373383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
WTC11_00032215	chr16	+	3121	6	FSM	ENSG00000168872.17	ENST00000562140.2	3121	6	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	125.303471619904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAGAAAAAAATATAG	70364516	False	NA	NA	False	NA	NA	NA	70364542	70373070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70371564_70371924
WTC11_00032221	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_16	115.377613079835	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	70501743	True	NA	7	True	AATAAA	-18	NA	70523815	70577668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
WTC11_00032230	chr16	+	3435	2	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTTGGCCCAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	70616453	70624205	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_70619813_70624129
WTC11_00032231	chr16	+	1607	6	FSM	ENSG00000157368.12	ENST00000288098.7	1613	6	6	0	2	0	multi-exon	FALSE	canonical	3	17	junction_2	4.53431361950185	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	36	True	ATTAAA	-18	NA	70646564	70660682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
WTC11_00032232	chr16	+	609	1	FSM	ENSG00000279412.1	ENST00000625095.1	2904	1	1744	551	1744	-551	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAATCTTTGACCCCTG	NA	False	NA	NA	False	NA	NA	NA	70715730	70716339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70715700_70716300
WTC11_00032235	chr16	+	2950	3	FSM	ENSG00000140832.11	ENST00000268485.8	2914	3	-36	0	-13	0	multi-exon	FALSE	canonical	3	85	junction_2	33	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTCCTCAGTTTTTT	71619933	True	NA	6	True	AATAAA	-16	NA	71626147	71636465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71626697_71629366_71629495_71634192
WTC11_00032236	chr16	+	2217	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	-3	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	41	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	71619969	True	NA	10	True	AATAAA	-20	NA	71626183	71641965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71626697_71629366_71629495_71640389
WTC11_00032239	chr16	+	1888	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	74	0	74	0	multi-exon	FALSE	canonical	3	10	junction_1	337.847243587986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	71893972	False	NA	NA	False	NA	NA	NA	71894007	71927973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
WTC11_00032240	chr16	+	2575	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	-320	0	-260	0	multi-exon	FALSE	canonical	3	95	junction_7	261.558519981667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	71895103	False	NA	21	True	AATAAA	-19	NA	71895232	71929008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
WTC11_00032243	chr16	+	4544	10	FSM	ENSG00000182149.21	ENST00000378799.11	4561	10	0	17	0	-17	multi-exon	FALSE	canonical	3	700	junction_8	75.3216969052833	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTGTCAGCAAAAATTT	71891099	True	NA	NA	False	NA	NA	NA	71895530	71931182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
WTC11_00032246	chr16	+	4675	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	-6	0	-6	0	multi-exon	FALSE	canonical	2	180	junction_7	33.843158466668	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	72006561	True	NA	5	True	AATATA	-14	NA	72008737	72027659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
WTC11_00032255	chr16	+	910	7	FSM	ENSG00000140829.12	ENST00000567142.2	892	7	-18	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	85.2220954656453	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCATGTCTGACTTTT	72108338	False	NA	19	True	AATAAA	-19	NA	72108353	72112909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412_72112530_72112624
WTC11_00032257	chr16	+	1261	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	-59	-271	-44	271	multi-exon	FALSE	canonical	3	1751	junction_2	157.319293158849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAGATCTGAACTGTTG	74274060	True	NA	NA	False	NA	NA	NA	74296769	74304980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
WTC11_00032259	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	143.623350005028	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	74274104	True	NA	21	True	ATTAAA	-16	NA	74296813	74306288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
WTC11_00032266	chr16	+	660	4	NIC	ENSG00000186187.12	novel	4626	5	NA	NA	-314	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_1	182.079347782468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTAGTGTCGACTGGTGTT	74999908	False	NA	19	True	TATAAA	-7	NA	74999927	75108028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_75000096_75104783_75104890_75106481_75106572_75107732
WTC11_00032270	chr16	+	5331	1	FSM	ENSG00000186187.12	ENST00000568844.1	5331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGAGCGCCTCCTAGT	75105352	False	NA	36	True	AATAAA	-20	NA	75105382	75110713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75105400_75110700
WTC11_00032272	chr16	+	3314	4	FSM	ENSG00000184517.12	ENST00000570010.6	3287	4	-32	5	-2	-5	multi-exon	FALSE	canonical	3	46	junction_3	3.55902608401044	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATATGTGTGTCTTTGT	75147811	True	NA	3	True	AATAAA	-10	NA	75148491	75172229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75148644_75152908_75152967_75166769_75166897_75169252
WTC11_00032281	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	8.18290901819151	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	77189471	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
WTC11_00032287	chr16	+	1132	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	-38	2	-16	0	multi-exon	FALSE	canonical	3	21	junction_3	43.1508980207828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	77721788	True	NA	NA	False	AATAAA	-17	NA	77722475	77742258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
WTC11_00032288	chr16	+	935	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	-5	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	32.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	77721826	True	NA	NA	False	AATAAA	-17	NA	77722513	77742258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77722618_77725430_77725585_77741581
WTC11_00032289	chr16	+	3804	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	122	junction_8	9.95536915438097	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	77787030	True	NA	18	True	AATAAA	-24	NA	77788550	77980107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
WTC11_00032291	chr16	+	615	4	FSM	ENSG00000171724.3	ENST00000563850.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	68.8686350154327	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTATTCACTAAACCAAAA	77862730	True	NA	NA	False	AATAGA	-44	NA	77862747	77882408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77862891_77876369_77876474_77879168_77879225_77882096
WTC11_00032294	chr16	+	544	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	-19	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	78096214	True	NA	6	True	AATAAA	-19	NA	78099655	78100199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78099700_78100200
WTC11_00032300	chr16	+	322	1	FSM	ENSG00000276007.1	ENST00000612986.1	1090	1	241	527	241	-527	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACCCAGTGTTACATAAT	NA	False	NA	NA	False	AATATA	-26	NA	78123483	78123805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78123500_78123800
WTC11_00032302	chr16	+	2851	1	FSM	ENSG00000260816.2	ENST00000568885.2	4284	1	671	762	671	-762	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTATAAAATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	78896031	78898882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78896000_78898900
WTC11_00032304	chr16	+	4009	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	-81	0	-74	0	multi-exon	FALSE	canonical	3	171	junction_7	446.833179161978	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	81006993	False	NA	17	True	AATAAA	-19	NA	81007132	81031485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
WTC11_00032305	chr16	+	1699	10	FSM	ENSG00000166451.14	ENST00000439957.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	436.82357938437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACATCAGTTAATTTTG	80995241	True	NA	3	True	AATAAA	-14	NA	81007206	81029309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
WTC11_00032308	chr16	+	4905	4	FSM	ENSG00000166454.10	ENST00000299575.5	4881	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	460	junction_3	52.6392333615231	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTATTTTCATTGTTT	81031202	True	NA	8	True	GATAAA	-20	NA	81035817	81047350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81036207_81041355_81041482_81042280_81042481_81043160
WTC11_00032310	chr16	+	5364	3	FSM	ENSG00000166454.10	ENST00000566488.1	5343	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	460	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCAGTTATTTTCATT	81040456	False	NA	4	True	GATAAA	-16	NA	81040503	81047346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81041482_81042280_81042481_81043160
WTC11_00032312	chr16	+	15162	11	FSM	ENSG00000261609.8	ENST00000648994.2	15159	11	-3	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_10	7.31846978541279	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTTTCTGATTTT	81314064	True	NA	16	True	AATAAA	-21	NA	81314958	81390809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81315281_81351582_81351698_81354404_81354756_81356784_81357003_81357809_81357932_81362498_81362612_81363793_81363944_81364973_81365111_81365349_81365479_81377218_81377329_81377414
WTC11_00032319	chr16	+	1974	13	FSM	ENSG00000103154.10	ENST00000681513.1	1996	13	22	0	22	0	multi-exon	FALSE	canonical	3	15	junction_3	6.12995831053433	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTCTGTGTCTGT	83968254	True	NA	5	True	AATAAA	-16	NA	83968265	84002776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_83968850_83972150_83972176_83978443_83978553_83980838_83980865_83981029_83981128_83990493_83990631_83994301_83994421_83994608_83994689_83997215_83997270_83998204_83998318_84000723_84000802_84001824_84001917_84002317
WTC11_00032320	chr16	+	1364	11	FSM	ENSG00000103154.10	ENST00000565691.5	2064	11	700	0	700	0	multi-exon	FALSE	canonical	2	10	junction_2	7.03988636271922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTCTGTGTCTGT	83972078	False	NA	5	True	AATAAA	-16	NA	83972150	84002776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_83972176_83978443_83978553_83981029_83981128_83990493_83990631_83994301_83994421_83994608_83994689_83997215_83997270_83998204_83998318_84000723_84000802_84001824_84001917_84002317
WTC11_00032322	chr16	+	571	4	FSM	ENSG00000140955.11	ENST00000564169.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.63299316185545	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGGTGAGGGGCAGT	84194286	False	NA	NA	False	NA	NA	NA	84194358	84195438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84194583_84194932_84194981_84195068_84195195_84195265
WTC11_00032323	chr16	+	1426	7	FSM	ENSG00000103175.11	ENST00000219454.10	1295	7	-145	14	-113	-10	multi-exon	FALSE	canonical	1	1	junction_6	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACCAAATAAGATGCCGA	84294704	True	NA	NA	False	AATAAA	-2	NA	84294732	84329830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84295116_84312960_84313154_84318271_84318356_84319430_84319572_84324418_84324461_84326881_84326956_84329321
WTC11_00032327	chr16	+	1199	1	FSM	ENSG00000261471.1	ENST00000564809.1	2434	1	998	237	998	-237	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTATCAATTCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	84595390	84596589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84595400_84596600
WTC11_00032328	chr16	+	727	3	FSM	ENSG00000135686.13	ENST00000567410.5	585	3	-142	0	-41	0	multi-exon	FALSE	canonical	3	32	junction_1	55.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGGTGGACTTCCTGT	84647112	True	NA	NA	False	NA	NA	NA	84648469	84657100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84648888_84650851_84650931_84656870
WTC11_00032329	chr16	+	7556	5	FSM	ENSG00000135686.13	ENST00000564996.6	7559	5	3	0	3	0	multi-exon	FALSE	canonical	3	98	junction_1	17.1901134376711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTCCTTTTGGTGTT	84647156	True	NA	10	True	AATATA	-14	NA	84648513	84667686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84648650_84650851_84650931_84656870_84657945_84659759_84659918_84661577
WTC11_00032342	chr16	+	7350	12	FSM	ENSG00000135709.14	ENST00000538274.6	7360	12	0	10	0	2	multi-exon	FALSE	canonical	2	4	junction_11	7.98241869764189	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCTGTTTAA	85027324	True	NA	NA	False	AATAAA	-9	NA	85027781	85094220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924_85079004_85081314_85081393_85086643_85086725_85087071_85087167_85088275
WTC11_00032349	chr16	+	7140	15	FSM	ENSG00000131149.19	ENST00000393243.5	7140	15	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	44.0319920799708	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAAATCTTTTTTAT	85610438	False	NA	12	True	AATAAA	-19	NA	85613351	85676204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85613399_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
WTC11_00032354	chr16	+	487	4	FSM	ENSG00000131143.10	ENST00000566115.5	471	4	-16	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2329.20988033854	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGAGTGTGGGTATTGAA	85727231	True	NA	NA	False	NA	NA	NA	85799621	85805096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804539_85804662_85804936
WTC11_00032355	chr16	+	2271	3	FSM	ENSG00000131143.10	ENST00000568339.5	2271	3	0	0	0	0	multi-exon	FALSE	canonical	3	4946	junction_1	627.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727231	True	NA	30	True	AATAAA	-19	NA	85799621	85807002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804936
WTC11_00032356	chr16	+	505	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	-15	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	2623.9798374797	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	85727292	True	NA	NA	False	NA	NA	NA	85799682	85806802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
WTC11_00032358	chr16	+	883	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	-10	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	2722.21164680485	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	85727292	True	NA	-21	True	AATGAA	-6	NA	85799682	85807044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
WTC11_00032359	chr16	+	773	5	FSM	ENSG00000131143.10	ENST00000253452.8	763	5	-12	2	0	-2	multi-exon	FALSE	canonical	3	4946	junction_1	732.250298736709	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGTCTGGAGTAAATATA	85727292	True	NA	1	True	ATTAAA	-17	NA	85799682	85807066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804936_85805105_85805732_85805865_85806737
WTC11_00032360	chr16	+	1235	3	FSM	ENSG00000131143.10	ENST00000564648.1	1235	3	0	0	0	0	multi-exon	FALSE	canonical	3	6201	junction_1	398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACTGCTAATAAATGA	85801087	True	NA	-5	True	NA	NA	NA	85801201	85806967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85801279_85804936_85805865_85806737
WTC11_00032362	chr16	+	3946	1	FSM	ENSG00000131143.10	ENST00000569997.1	3946	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85802942	False	NA	30	True	AATAAA	-19	NA	85803056	85807002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85803100_85807000
WTC11_00032363	chr16	+	312	2	FSM	ENSG00000140968.11	ENST00000563180.1	1394	2	388	694	-54	-694	multi-exon	FALSE	canonical	3	5	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGAAACCTTCCAGAA	85902967	False	NA	NA	False	NA	NA	NA	85903076	85909188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85903190_85908989
WTC11_00032368	chr16	+	658	4	NNC	ENSG00000140941.14	novel	2147	4	NA	NA	3	-400	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_3	424.736258034193	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGACCTTCAAGTTAT	87387192	True	NA	-6	True	AATAAA	-26	NA	87392425	87403378	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_87392468_87398814_87398871_87402174_87402282_87402925
WTC11_00032370	chr16	+	2259	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	-97	2	-42	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.6757063737909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87951372	False	NA	15	True	AATAAA	-16	NA	87951389	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
WTC11_00032374	chr16	+	2621	14	FSM	ENSG00000172530.21	ENST00000682872.1	2398	14	-223	0	-221	0	multi-exon	FALSE	non_canonical	0	0	junction_9	37.0892095825136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87951193	False	NA	15	True	AATAAA	-16	NA	87951210	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
WTC11_00032376	chr16	+	2311	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	21.2464049246507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949513	True	NA	15	True	AATAAA	-16	NA	87951445	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
WTC11_00032377	chr16	+	2920	3	FSM	ENSG00000172530.21	ENST00000481948.1	1730	3	-1192	2	-1192	0	multi-exon	FALSE	canonical	1	4	junction_1	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	NA	False	NA	15	True	AATAAA	-16	NA	88069880	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88071930_88072068_88072213_88076589
WTC11_00032378	chr16	+	3787	19	FSM	ENSG00000158545.16	ENST00000452588.6	3211	19	-40	-536	-40	0	multi-exon	FALSE	canonical	3	23	junction_3	66.9880217779895	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCCTAAAATAAAATATT	88564902	True	NA	15	True	NA	NA	NA	88570362	88631934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88587541_88587614_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
WTC11_00032379	chr16	+	3727	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	-22	0	-22	0	multi-exon	FALSE	canonical	3	156	junction_7	34.2680255902594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	88564920	True	NA	15	True	AATAAA	-16	NA	88570380	88631964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
WTC11_00032380	chr16	+	712	6	FSM	ENSG00000158545.16	ENST00000567085.1	712	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	78.76445899008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTTCATCCTACAG	88586601	True	NA	NA	False	NA	NA	NA	88586616	88623270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88622196_88622389_88623218
WTC11_00032389	chr16	+	1651	14	NIC	ENSG00000174177.13	novel	1721	15	NA	NA	0	-2	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	60.72198747829	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTCTACAGTACACGT	88703467	True	NA	1	True	AATAAA	-19	NA	88706482	88715381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88706599_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
WTC11_00032397	chr16	+	2664	10	FSM	ENSG00000167513.9	ENST00000301019.9	2664	10	0	0	0	0	multi-exon	TRUE	canonical	3	464	junction_1	60.0045265782219	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCAGAAGAGCCCTCG	88789559	True	NA	15	True	AATAAA	-20	NA	88803788	88809258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88804060_88804544_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020_88806122_88806485_88806675_88807050_88807204_88807280_88807483_88808114
WTC11_00032398	chr16	+	654	5	FSM	ENSG00000167513.9	ENST00000562747.1	735	5	0	81	0	-81	multi-exon	FALSE	canonical	3	540	junction_4	14.6522182620926	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCTGTGTGAAGATGGT	88804596	False	NA	NA	False	NA	NA	NA	88804610	88806136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020
WTC11_00032399	chr16	+	571	5	FSM	ENSG00000167513.9	ENST00000569140.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	255.610543601002	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCTGCAGCGCTTAGAAC	88805749	False	NA	NA	False	NA	NA	NA	88805767	88807342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88805870_88806020_88806122_88806485_88806639_88807050_88807204_88807280
WTC11_00032400	chr16	+	2619	5	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	-95	3	intron_retention	FALSE	canonical	3	109	junction_2	407.003071241483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGATTTTTGGGTTTTC	88856914	False	NA	21	True	AATAAA	-22	NA	88856990	88862679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860910
WTC11_00032402	chr16	+	992	2	FSM	ENSG00000167515.10	ENST00000564547.1	980	2	-12	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACCCAGCACGGCCAC	88846094	True	NA	NA	False	NA	NA	NA	88857085	88859512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618
WTC11_00032403	chr16	+	858	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	24	junction_1	429.079465250902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	88846090	True	NA	NA	False	NA	NA	NA	88857081	88861351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
WTC11_00032404	chr16	+	2219	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	330	junction_4	305.427057576764	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	88846090	True	NA	28	True	AATAAA	-29	NA	88857081	88862686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
WTC11_00032406	chr16	+	1088	5	FSM	ENSG00000167515.10	ENST00000565205.5	1084	5	-4	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	375.190951383426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACCATGTGGGTC	88846135	True	NA	NA	False	NA	NA	NA	88857126	88861287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860913
WTC11_00032408	chr16	+	588	5	NIC	ENSG00000167515.10	novel	2215	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	812	junction_4	110.404653434536	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846144	True	NA	16	True	ACTAAA	-16	NA	88857135	88861112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860913
WTC11_00032412	chr16	+	853	6	FSM	ENSG00000176715.17	ENST00000540697.5	829	6	-24	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_1	35.5696499842211	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACCCAGCCCCATGGG	89092419	True	NA	43	True	AAGAAA	-40	NA	89093843	89133262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89093997_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135
WTC11_00032414	chr16	+	1556	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	-15	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.6199996922698	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	89092458	True	NA	8	True	AAAACA	-23	NA	89093882	89154588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
WTC11_00032415	chr16	+	3296	8	ISM	ENSG00000176715.17	ENST00000542688.5	2024	9	1957	-1367	6	61	3prime_fragment	FALSE	canonical	3	15	junction_3	38.2953079664454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACAGAAAGCCTGGAGCT	89099243	False	NA	NA	False	NA	NA	NA	89100667	89155907	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89101348_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
WTC11_00032416	chr16	+	2001	9	ISM	ENSG00000176715.17	ENST00000406948.7	2247	10	6905	6	126	-1	3prime_fragment	FALSE	canonical	3	75	junction_3	21.3409817018805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCCCTGTCCCACGC	89099363	False	NA	3	True	AAAACA	-18	NA	89100787	89154583	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
WTC11_00032425	chr16	+	3085	17	FSM	ENSG00000197912.16	ENST00000645818.2	3076	17	-10	1	0	-1	multi-exon	FALSE	canonical	3	581	junction_9	60.7890499493947	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGCATTGTCTGGCCA	89498357	True	NA	28	True	AATAAA	-20	NA	89508392	89557765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032427	chr16	+	2462	10	FSM	ENSG00000197912.16	ENST00000341316.6	2288	10	-174	0	-130	0	multi-exon	FALSE	canonical	3	64	junction_9	214.325297931283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCAGTGCTTGCCGTG	89508209	False	NA	5	True	AATAAA	-16	NA	89508236	89537721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89536764
WTC11_00032428	chr16	+	3258	19	FSM	ENSG00000197912.16	ENST00000646826.1	3249	19	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	258.741881246757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATAAACTGTGTAGTTG	89498365	True	NA	0	True	NA	NA	NA	89508400	89557737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546031_89546131_89546182_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032429	chr16	+	4296	18	FSM	ENSG00000197912.16	ENST00000644901.1	4288	18	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	296.652325249819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498359	True	NA	10	True	AATAAA	-2	NA	89508394	89557747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89528631_89529525_89530682_89530809_89531903_89532067_89532462_89532637_89540943_89541385_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032432	chr16	+	4589	17	FSM	ENSG00000197912.16	ENST00000644225.1	4581	17	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	178.245255459297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498357	True	NA	10	True	AATAAA	-2	NA	89508392	89557747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89556086_89556886
WTC11_00032433	chr16	+	2582	14	FSM	ENSG00000197912.16	ENST00000646589.1	2565	14	-17	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	189.166374284024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498357	True	NA	10	True	AATAAA	-2	NA	89508392	89557747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032435	chr16	+	3851	18	FSM	ENSG00000197912.16	ENST00000643668.1	3851	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	265.177879843846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGGAAAATCTACATT	89498365	True	NA	13	True	AATAAA	-5	NA	89508400	89557750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89523482_89524248_89526328_89526469_89526757_89527024_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032436	chr16	+	4176	16	FSM	ENSG00000197912.16	ENST00000645977.1	4168	16	-8	0	0	0	multi-exon	FALSE	canonical	3	581	junction_8	59.5953018282482	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	89498359	True	NA	18	True	AATAAA	-10	NA	89508394	89557755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032443	chr16	+	2859	14	FSM	ENSG00000197912.16	ENST00000643496.1	2859	14	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_6	44.0217805155961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	NA	False	NA	10	True	AATAAA	-2	NA	89523812	89557747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032453	chr16	+	3384	8	FSM	ENSG00000197912.16	ENST00000645392.1	3384	8	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_4	26.704734732681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	NA	False	NA	11	True	AATAAA	-3	NA	89542982	89557748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032456	chr16	+	3699	8	NIC	ENSG00000197912.16	novel	2475	12	NA	NA	49	0	intron_retention	FALSE	canonical	2	15	junction_3	235.026355447856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCATTGTCTGGCCAG	NA	False	NA	29	True	AATAAA	-21	NA	89543908	89557766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89544773_89546657_89546761_89548002_89549337_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032460	chr16	+	3729	5	FSM	ENSG00000197912.16	ENST00000561702.6	3729	5	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	21.988633427296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACATTTGCATTGTCTGG	NA	False	NA	25	True	AATAAA	-17	NA	89548158	89557762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00032464	chr16	+	620	2	FSM	ENSG00000167526.14	ENST00000487034.5	615	2	-5	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGCTGGAGAAAGCCCG	89328901	True	NA	26	True	NA	NA	NA	89560676	89561523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89560713_89560939
WTC11_00032465	chr16	+	698	4	FSM	ENSG00000167526.14	ENST00000491523.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	4805.48140726354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	89328901	True	NA	NA	False	NA	NA	NA	89560676	89562393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89560713_89560939_89561369_89561577_89561752_89562334
WTC11_00032466	chr16	+	936	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	-2	-10	0	-3	multi-exon	FALSE	canonical	3	9495	junction_1	3985.08302924795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTCTCCACGTGGTG	89328901	True	NA	13	True	AATAAA	-35	NA	89560676	89563077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
WTC11_00032468	chr16	+	528	4	FSM	ENSG00000167526.14	ENST00000467736.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8915.59623481359	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGGAAGCCCTCGGCC	89328935	True	NA	NA	False	NA	NA	NA	89560710	89561710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89560840_89560939_89561064_89561226_89561369_89561577
WTC11_00032470	chr16	+	879	4	FSM	ENSG00000167526.14	ENST00000399461.8	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	18211	junction_3	699.398471704237	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCAGTCATGCTGGGTC	89560862	False	NA	2	True	AATAAA	-24	NA	89560903	89563066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89561369_89561577_89561752_89562334_89562392_89562883
WTC11_00032472	chr16	+	844	2	ISM	ENSG00000178773.15	ENST00000525982.5	576	4	-65	5687	-41	-5687	5prime_fragment	FALSE	canonical	3	125	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCACTTTTCCTCTT	89573425	True	NA	NA	False	NA	NA	NA	89575716	89578027	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89576072_89577538
WTC11_00032473	chr16	+	600	4	FSM	ENSG00000178773.15	ENST00000525982.5	576	4	-24	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	50.6776303927307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCCGCCCGCTGCTGCT	89573466	True	NA	NA	False	NA	NA	NA	89575757	89583714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89576072_89577538_89577722_89583443_89583529_89583696
WTC11_00032476	chr16	+	2459	15	FSM	ENSG00000178773.15	ENST00000319518.13	2442	15	-17	0	-17	0	multi-exon	TRUE	canonical	3	34	junction_9	30.11339114963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573449	True	NA	14	True	AATAAA	-20	NA	89575740	89597246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
WTC11_00032483	chr16	+	1235	2	ISM	ENSG00000178773.15	ENST00000566398.1	672	3	1032	-387	-444	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89595118	False	NA	14	True	AATAAA	-20	NA	89595131	89597246	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89595604_89596483
WTC11_00032485	chr16	+	1647	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-4	-12	-4	-11	multi-exon	FALSE	canonical	3	82	junction_6	13.9143810498347	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCGGCATCCGGCTCA	89612044	True	NA	27	True	AATAAA	-30	NA	89613637	89638445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
WTC11_00032486	chr16	+	1576	10	FSM	ENSG00000015413.10	ENST00000261615.5	1592	10	16	0	16	0	multi-exon	FALSE	canonical	3	82	junction_5	14.5296631451356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCAGGAGGTGGGGT	NA	False	NA	38	True	AATAAA	-41	NA	89630304	89638456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
WTC11_00032487	chr16	+	512	3	FSM	ENSG00000015413.10	ENST00000564645.1	512	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGCCCTGCTGCCCA	89637565	False	NA	NA	False	NA	NA	NA	89637575	89638295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89637708_89637835_89637972_89638051
WTC11_00032488	chr16	+	601	3	FSM	ENSG00000167523.15	ENST00000566204.2	647	3	46	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_1	37	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGCAGCCCCCTTCTC	89657773	False	NA	NA	False	NA	NA	NA	89657785	89669631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89657867_89658247_89658422_89669285
WTC11_00032490	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	89656709	True	NA	NA	False	NA	NA	NA	89657828	89671272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89658210_89669285
WTC11_00032491	chr16	+	1494	3	FSM	ENSG00000167523.15	ENST00000579310.6	1460	3	-36	2	-2	0	multi-exon	FALSE	canonical	3	44	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	89656680	True	NA	8	True	AATAAA	-19	NA	89657799	89670456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89657949_89658247_89658422_89669285
WTC11_00032494	chr16	+	565	5	FSM	ENSG00000185324.22	ENST00000502547.5	551	5	-14	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	212.473968993851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGAAGGAGGTGGTTGT	89681607	True	NA	NA	False	NA	NA	NA	89686669	89691507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89686798_89687588_89687816_89689251_89689325_89690552_89690625_89691442
WTC11_00032497	chr16	+	1397	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	-21	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	119.924287409781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	89681607	True	NA	NA	False	NA	NA	NA	89686669	89696038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00032503	chr16	+	1818	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	0	-8	intron_retention	FALSE	canonical	3	193	junction_1	78.6029881878934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAGACATGGTTTCAC	89681637	True	NA	26	True	GATAAA	-7	NA	89686699	89696345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00032504	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	82.4024271487194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681637	True	NA	35	True	GATAAA	-16	NA	89686699	89696354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00032505	chr16	+	1632	12	NIC	ENSG00000185324.22	novel	1376	12	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	124.62698061624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAGACATGGTTTCAC	89681641	True	NA	26	True	GATAAA	-7	NA	89686703	89696345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89686760_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00032514	chr16	+	931	2	FSM	ENSG00000261373.1	ENST00000562298.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTCCTCTCCTTGCCAGT	89716517	False	NA	NA	False	NA	NA	NA	89716527	89718164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89716638_89717343
WTC11_00032518	chr16	+	4616	11	FSM	ENSG00000158805.12	ENST00000443381.7	4628	11	0	12	0	10	multi-exon	FALSE	canonical	3	10	junction_1	12.9769025580067	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTCTAAATAAGGCTG	89721432	True	NA	NA	False	AATAAA	-37	NA	89721536	89740913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89721846_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727358_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
WTC11_00032525	chr16	+	2190	13	FSM	ENSG00000204991.11	ENST00000393062.6	2172	13	-18	0	6	0	multi-exon	FALSE	canonical	3	13	junction_12	9.81884525910365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATATTTATATACAC	89827764	True	NA	11	True	AATATA	-9	NA	89828480	89870391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89870049
WTC11_00032527	chr16	+	1818	3	FSM	ENSG00000204991.11	ENST00000563972.1	1823	3	0	5	0	-5	multi-exon	FALSE	canonical	2	2	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACAGCACTTAACAATT	89827830	False	NA	NA	False	AATAAA	-19	NA	89828546	89847151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89828795_89845321_89845366_89845625
WTC11_00032528	chr16	+	672	3	FSM	ENSG00000204991.11	ENST00000561883.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACCGCAGGTCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	89854321	89856061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89854367_89854486_89854652_89855599
WTC11_00032530	chr16	+	505	4	FSM	ENSG00000204991.11	ENST00000565628.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	17.5182444579612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGCCACGACGCAGTCGC	NA	False	NA	NA	False	NA	NA	NA	89863441	89870201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89863611_89863793_89863862_89869566_89869683_89870049
WTC11_00032539	chr16	+	1947	9	FSM	ENSG00000141002.20	ENST00000570116.6	1947	9	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	26.2488094968134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCTCCTATAAATGTA	NA	False	NA	1	True	NA	NA	NA	89895989	89911350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
WTC11_00032553	chr16	+	952	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	-136	0	-102	0	multi-exon	FALSE	canonical	3	238	junction_1	122.693469671372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	89948594	89959363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
WTC11_00032554	chr16	+	3644	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	-24	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	164.586350183321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942000	True	NA	5	True	ATTAAA	-14	NA	89948730	89968060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
WTC11_00032556	chr16	+	3725	13	FSM	ENSG00000140995.17	ENST00000268676.11	3725	13	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	175.001587294389	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942044	True	NA	5	True	ATTAAA	-14	NA	89948774	89968060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89949416_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
WTC11_00032560	chr16	+	554	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	89958189	True	NA	NA	False	ATTAAA	-13	NA	89958331	89959365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89958534_89959013
WTC11_00032576	chr16	+	3111	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	-17	0	-1	0	multi-exon	FALSE	canonical	3	24	junction_1	34.3920048848566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	90022381	True	NA	16	True	TATAAA	-16	NA	90022662	90044960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
WTC11_00032577	chr16	+	3242	11	FSM	ENSG00000141013.17	ENST00000620723.4	3308	11	66	0	2	0	multi-exon	FALSE	canonical	2	5	junction_2	41.1155688273919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGTGGTTTTCACTT	90022384	True	NA	27	True	TATAAA	-27	NA	90022665	90044971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
WTC11_00032578	chr16	+	3194	10	FSM	ENSG00000141013.17	ENST00000566266.5	3174	10	-20	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_2	47.6608388045737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGTTTTCACTTAAAA	90022381	True	NA	31	True	TATAAA	-31	NA	90022662	90044975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
WTC11_00032585	chr16	+	989	7	FSM	ENSG00000260528.6	ENST00000660257.1	1492	7	0	503	0	-503	multi-exon	FALSE	canonical	3	20	junction_3	28.6497042839111	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTCTTGTAATCTTA	90100116	True	NA	NA	False	AAGAAA	-19	NA	90106563	90134397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90128622_90128733_90129796_90129929_90133218_90133435_90134318
WTC11_00032587	chr16	+	2147	9	NNC	ENSG00000260528.6	novel	2184	8	NA	NA	14034	7510	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	52.9148785787136	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCACCTTCTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	90143830	90167086	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_90143962_90146647_90146713_90155967_90156092_90157957_90158056_90159432_90159498_90161683_90162103_90165521_90165789_90166015_90166074_90166166
WTC11_00032588	chr16	+	561	2	FSM	ENSG00000260528.6	ENST00000566898.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGTGAGAGAAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	90158171	90159576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90158589_90159432
WTC11_00032591	chr16	-	1596	7	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	685	297	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	88.3529852353615	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTGCTTTTAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	17383	14083	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14512_14651_14721_15480_15994_16289_16449_16540_16739_16915_17052_17290
WTC11_00032592	chr16	-	757	4	NNC	ENSG00000161980.6	novel	1372	3	NA	NA	0	23015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	566.630587086703	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAAAAACAAAATCA	-45383	True	NA	NA	False	AAAACA	-1	NA	53608	23391	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23419_47048_47558_51557_51646_53475
WTC11_00032594	chr16	-	1846	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	-246	-228	-246	228	multi-exon	FALSE	canonical	3	1200	junction_1	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAATCCCCTCTAATT	NA	False	NA	NA	False	NA	NA	NA	53854	46178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47558_51557_51646_53475
WTC11_00032595	chr16	-	3009	18	FSM	ENSG00000007384.15	ENST00000262316.10	2992	18	0	-17	0	17	multi-exon	FALSE	canonical	1	57	junction_2	46.2804000903833	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTCTGGCTGGAA	-69651	True	NA	10	True	NA	NA	NA	72631	58041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
WTC11_00032596	chr16	-	914	3	FSM	ENSG00000007384.15	ENST00000486045.1	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGGCCCTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	60193	58973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_59350_59418_59495_59731
WTC11_00032597	chr16	-	2281	17	ISM	ENSG00000007384.15	ENST00000262316.10	2992	18	10	915	0	0	5prime_fragment	FALSE	canonical	1	57	junction_1	43.1856005371003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGGCCCTCAGGGT	-69641	True	NA	NA	False	NA	NA	NA	72621	58973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
WTC11_00032602	chr16	-	3128	14	FSM	ENSG00000103148.17	ENST00000611875.5	3128	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	47.3016256272683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	-137839	True	NA	NA	False	NA	NA	NA	138673	85385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149_138335_138641
WTC11_00032603	chr16	-	2784	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	32.4513622070154	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137678	False	NA	-44	True	AATAAA	-32	NA	138512	85800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
WTC11_00032604	chr16	-	2812	11	FSM	ENSG00000103148.17	ENST00000621703.4	2812	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	47.9196201988288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137836	True	NA	-44	True	AATAAA	-32	NA	138670	85800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_130521_130592_138149
WTC11_00032609	chr16	-	465	1	FSM	ENSG00000268836.1	ENST00000595428.1	547	1	81	1	81	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTGTTTTTTGCTTTT	-186177	False	NA	-2	True	CATAAA	-17	NA	186213	185748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_185700_186200
WTC11_00032610	chr16	-	1526	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	-6	0	0	multi-exon	FALSE	canonical	3	96	junction_9	196.873157134232	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219466	True	NA	-10	True	AATAAA	-44	NA	229450	188968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
WTC11_00032611	chr16	-	1506	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	-2	0	0	multi-exon	FALSE	canonical	3	133	junction_1	150.898870558406	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219479	True	NA	-10	True	AATAAA	-44	NA	229463	188968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
WTC11_00032612	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	66.317418526357	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219479	True	NA	-10	True	AATAAA	-44	NA	229463	188968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
WTC11_00032613	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_9	66.7096157949225	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219465	True	NA	-31	True	AATAAA	-23	NA	229449	188989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
WTC11_00032614	chr16	-	2134	8	FSM	ENSG00000007392.17	ENST00000464711.5	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_7	177.731510419279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	NA	False	NA	-20	True	AATACA	-23	NA	209773	189097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600
WTC11_00032615	chr16	-	1335	8	FSM	ENSG00000007392.17	ENST00000397780.5	1335	8	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_6	52.8331992101132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-227651	False	NA	NA	False	NA	NA	NA	227686	189895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241
WTC11_00032616	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	207.450127875486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-219450	True	NA	NA	False	NA	NA	NA	229434	189895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
WTC11_00032621	chr16	-	6340	8	FSM	ENSG00000103126.15	ENST00000461023.5	6340	8	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_6	37.2383388129898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	-346311	False	NA	-1	True	AATAAA	-18	NA	346322	287439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147
WTC11_00032622	chr16	-	3325	10	FSM	ENSG00000103126.15	ENST00000354866.7	3324	10	0	-1	0	0	multi-exon	FALSE	canonical	3	133	junction_9	45.8300672236949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	-352438	False	NA	-1	True	AATAAA	-18	NA	352449	287439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
WTC11_00032623	chr16	-	3707	11	FSM	ENSG00000103126.15	ENST00000262320.8	3707	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	71.8648731996377	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	-349429	True	NA	-1	True	AATAAA	-18	NA	352723	287439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_289608_291189_291298_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
WTC11_00032625	chr16	-	1127	7	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	-3	22499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	683.109800837318	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTGTAGGTTAATTGG	-359584	True	NA	NA	False	AAAACA	-17	NA	370541	344469	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_344496_367394_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
WTC11_00032626	chr16	-	1524	6	FSM	ENSG00000086504.18	ENST00000199706.13	1524	6	0	0	0	0	multi-exon	FALSE	canonical	1	438	junction_3	576.441289291459	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-359581	True	NA	-43	True	NA	NA	NA	370538	366968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
WTC11_00032627	chr16	-	1707	6	FSM	ENSG00000086504.18	ENST00000648346.1	1707	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	708.849885377715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-371266	False	NA	-43	True	NA	NA	NA	371289	366968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_371066
WTC11_00032628	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_4	498.456868745933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-359552	True	NA	-10	True	AGTAAA	-26	NA	370509	367383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
WTC11_00032629	chr16	-	2239	4	FSM	ENSG00000086504.18	ENST00000481453.5	2229	4	0	-10	0	0	multi-exon	FALSE	canonical	3	503	junction_3	568.645759678202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-359569	True	NA	-10	True	AGTAAA	-26	NA	370526	367383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_370226_370498
WTC11_00032636	chr16	-	3687	13	FSM	ENSG00000129925.11	ENST00000431232.7	3672	13	0	-15	0	15	multi-exon	FALSE	canonical	3	595	junction_10	65.001869631231	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGCTCCTTCCCGGG	-376164	True	NA	-1	True	ACTAAA	-16	NA	381978	370772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
WTC11_00032638	chr16	-	2847	12	NIC	ENSG00000129925.11	novel	3672	13	NA	NA	77	-1	intron_retention	FALSE	canonical	3	595	junction_9	57.310088823799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTCCTCCTACTGAGG	-376087	True	NA	-4	True	AATAAA	-17	NA	381901	371862	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
WTC11_00032642	chr16	-	3320	1	FSM	ENSG00000277142.1	ENST00000622160.1	2253	1	-2	-1065	-2	1065	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGAGCAGGTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	527409	524089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_524100_527400
WTC11_00032643	chr16	-	817	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	-16	0	16	multi-exon	FALSE	canonical	3	84	junction_3	476.879112039938	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCCTAGGAGCACCTT	-616854	True	NA	1	True	AATAAA	-37	NA	636366	634410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
WTC11_00032644	chr16	-	562	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	-18	0	16	multi-exon	FALSE	canonical	3	148	junction_2	614.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCCTAGGAGCACCTT	-616830	True	NA	1	True	AATAAA	-37	NA	636342	634410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_636093
WTC11_00032645	chr16	-	745	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	-19	0	16	multi-exon	FALSE	canonical	3	168	junction_2	447.374214165278	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCCTAGGAGCACCTT	-616790	True	NA	1	True	AATAAA	-37	NA	636302	634410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
WTC11_00032646	chr16	-	816	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	-19	0	16	multi-exon	FALSE	canonical	3	485	junction_4	329.291117402216	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCCTAGGAGCACCTT	-616793	True	NA	1	True	AATAAA	-37	NA	636305	634410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
WTC11_00032647	chr16	-	1716	3	FSM	ENSG00000130731.16	ENST00000448973.6	1710	3	0	-6	0	0	multi-exon	FALSE	canonical	3	921	junction_2	228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616798	True	NA	-18	True	AATAAA	-18	NA	636310	634429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888
WTC11_00032648	chr16	-	612	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	-8	0	0	multi-exon	FALSE	canonical	3	168	junction_2	520.944228194237	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616839	True	NA	-18	True	AATAAA	-18	NA	636351	634429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_635280_635341_636093
WTC11_00032649	chr16	-	766	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	-11	0	0	multi-exon	FALSE	canonical	3	171	junction_3	414.677899097601	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616727	True	NA	-90	True	NA	NA	NA	636239	634501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
WTC11_00032650	chr16	-	582	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	-24	0	0	multi-exon	FALSE	canonical	3	43	junction_2	550.675544722621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616778	True	NA	-90	True	NA	NA	NA	636290	634501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_635611_635775_636093
WTC11_00032651	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	358.249563851793	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616819	True	NA	-90	True	NA	NA	NA	636331	634501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
WTC11_00032656	chr16	-	1934	9	FSM	ENSG00000161999.13	ENST00000609261.6	1934	9	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_8	44.8518394271629	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCGGGAGTCGGTG	-677232	True	NA	-12	True	AGTAAA	-14	NA	684334	681669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
WTC11_00032657	chr16	-	2206	8	FSM	ENSG00000161999.13	ENST00000567120.5	2205	8	0	-1	0	0	multi-exon	FALSE	canonical	3	487	junction_1	35.3218438513793	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCGGGAGTCGGTG	-684517	False	NA	-12	True	AGTAAA	-14	NA	684528	681669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065
WTC11_00032658	chr16	-	1975	6	FSM	ENSG00000161999.13	ENST00000565302.5	1975	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	212.002452815999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGCCAGTAAAGCCTT	-677234	True	NA	-40	True	NA	NA	NA	684336	681697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_683088_683166_683235_683321_683442_683529_683599_683684_683910_684233
WTC11_00032659	chr16	-	1999	8	FSM	ENSG00000161999.13	ENST00000568689.5	1998	8	0	-1	0	0	multi-exon	FALSE	canonical	3	37	junction_1	184.347387243957	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGCCAGTAAAGCCTT	-677242	True	NA	-40	True	NA	NA	NA	684344	681697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682957_683088_683166_683235_683321_683599_683684_683782_683860_683910_684065_684156_684233
WTC11_00032671	chr16	-	3244	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	-1	0	1	multi-exon	FALSE	canonical	3	186	junction_6	17.8448171747429	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCACTGCGTGTCACCC	-688948	True	NA	-7	True	AATAAA	-16	NA	690398	684620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
WTC11_00032672	chr16	-	757	4	FSM	ENSG00000127580.17	ENST00000567014.1	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	14.613540144522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGACTCCTCCTTCTCGC	-686918	False	NA	NA	False	NA	NA	NA	686929	685449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_685598_685678_685784_685868_686187_686743
WTC11_00032673	chr16	-	2531	3	FSM	ENSG00000127585.12	ENST00000562648.2	2531	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGTTGTTTTTAGGT	-695521	False	NA	0	True	ATTAAA	-18	NA	695532	692497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_694424_694633_694698_694991
WTC11_00032674	chr16	-	2172	4	NIC	ENSG00000127585.12	novel	2257	4	NA	NA	-53	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	30.4740326617051	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCTGAGTTGTTTTT	-695305	False	557	-4	True	ATTAAA	-14	NA	695316	692501	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_694424_694633_694698_694991_695077_695215
WTC11_00032675	chr16	-	2657	4	FSM	ENSG00000127585.12	ENST00000562563.1	2257	4	25	-425	25	-2	multi-exon	FALSE	canonical	3	45	junction_3	38.4736562107401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCTGAGTTGTTTTT	-695410	False	NA	-4	True	ATTAAA	-14	NA	696000	692501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_694424_694633_694698_694991_695077_695414
WTC11_00032676	chr16	-	3552	6	FSM	ENSG00000127585.12	ENST00000397621.6	3519	6	-33	0	-26	0	multi-exon	FALSE	canonical	2	5	junction_5	51.8189154653009	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGAGTTGTTTTTAG	-705244	True	NA	-2	True	ATTAAA	-16	NA	705834	692499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_694424_694633_694698_694991_695077_695414_695924_696772_697420_705511
WTC11_00032677	chr16	-	1853	13	FSM	ENSG00000162004.19	ENST00000466708.5	1847	13	0	-6	0	0	multi-exon	TRUE	canonical	2	4	junction_12	15.8210478652824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTTTATCGTGTCTA	-726417	False	463	1	True	CATAAA	-23	NA	726880	722581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_724807_724910_724990_725077_725146_725236_725294_725445_725581_725793_725881_725965_726086_726614
WTC11_00032678	chr16	-	899	5	FSM	ENSG00000162004.19	ENST00000482152.1	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	7.04893608993584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACCCAGCCCCCCATAA	-724172	False	NA	-42	True	NA	NA	NA	724635	722624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_722790_722921_723162_723856_723937_724105_724206_724321
WTC11_00032683	chr16	-	506	4	FSM	ENSG00000162004.19	ENST00000474647.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.0791413879619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGCATCAGGAGGCCC	-726405	False	463	NA	False	NA	NA	NA	726868	725122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_725294_725793_725881_725965_726086_726740
WTC11_00032684	chr16	-	2949	2	FSM	ENSG00000103245.14	ENST00000563051.1	2943	2	0	-6	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	-732882	False	NA	-13	True	AATAAA	-19	NA	732900	729764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842
WTC11_00032686	chr16	-	2506	9	FSM	ENSG00000103245.14	ENST00000568545.5	2486	9	0	-20	0	20	multi-exon	FALSE	canonical	3	127	junction_5	21.6011429095777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACATCTGCCAACACTGA	-737871	False	NA	12	True	AATAAA	-44	NA	737889	729739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185
WTC11_00032687	chr16	-	3220	10	FSM	ENSG00000103245.14	ENST00000540986.5	3212	10	0	-8	0	2	multi-exon	FALSE	canonical	3	127	junction_5	21.8428732338745	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACAGCTCCTCTCCTGG	-739212	True	NA	-6	True	AATAAA	-26	NA	740934	729757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642
WTC11_00032688	chr16	-	2102	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	-7	0	2	multi-exon	FALSE	canonical	3	127	junction_5	20.8844439715306	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACAGCTCCTCTCCTGG	-739275	True	NA	-6	True	AATAAA	-26	NA	740997	729757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
WTC11_00032696	chr16	-	2152	5	FSM	ENSG00000007376.8	ENST00000561734.5	2159	5	0	7	0	-7	multi-exon	FALSE	canonical	3	238	junction_2	11.8611761642765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGATGACCGTGAACGT	-784923	False	NA	-15	True	AATAAA	-17	NA	787981	784980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555
WTC11_00032697	chr16	-	2041	6	FSM	ENSG00000007376.8	ENST00000007264.7	2048	6	0	7	0	-7	multi-exon	TRUE	canonical	3	189	junction_5	27.6188341535265	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGATGACCGTGAACGT	-785323	True	NA	-15	True	AATAAA	-17	NA	788381	784980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787745_788255
WTC11_00032698	chr16	-	1918	5	FSM	ENSG00000007376.8	ENST00000565809.5	1918	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	102.822662871567	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGCTCCAAGGATGA	-785313	True	NA	-25	True	AATAAA	-7	NA	788371	784990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787353_787478_787555_787745_788255
WTC11_00032699	chr16	-	1858	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	-23	0	0	multi-exon	FALSE	canonical	3	44	junction_4	88.5476566601285	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGCTCCAAGGATGA	-785339	True	NA	-25	True	AATAAA	-7	NA	788397	784990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
WTC11_00032706	chr16	-	613	3	FSM	ENSG00000127588.5	ENST00000248150.5	985	3	0	372	0	-372	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCCCCACTCCCAGCC	-800631	False	103	NA	False	NA	NA	NA	800734	798412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_798825_798979_799112_800665
WTC11_00032707	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	16.1418710191849	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-970480	True	NA	-3	True	NA	NA	NA	970984	853633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
WTC11_00032709	chr16	-	1661	4	NNC	ENSG00000260807.7	novel	1728	4	NA	NA	-178	40655	intron_retention	FALSE	non_canonical	0	0	junction_1	17.0163320241336	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGATCAACCCCAGGATA	-979458	False	NA	NA	False	NA	NA	NA	979826	935105	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_935121_975759_977094_979024_979111_979600
WTC11_00032710	chr16	-	860	1	FSM	ENSG00000276931.1	ENST00000620075.1	638	1	-260	38	-260	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAACACTTGTAATTA	-968768	False	NA	NA	False	GGGGCT	-45	NA	969272	968412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_968400_969300
WTC11_00032711	chr16	-	1731	4	FSM	ENSG00000260807.7	ENST00000563863.5	1728	4	0	-3	0	0	multi-exon	FALSE	canonical	3	13	junction_3	11.4309521329882	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTCTCCCAAGTATT	-980930	False	NA	0	True	AATGAA	-22	NA	981298	975760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_977094_979024_979111_979600_979759_981144
WTC11_00032713	chr16	-	1911	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	-341	-757	-43	0	multi-exon	FALSE	canonical	3	9	junction_2	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTGTCTCCCAAGT	-981271	True	NA	-3	True	AATGAA	-19	NA	981639	975763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_977094_979024_979111_981144
WTC11_00032714	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_5	52.2899607955485	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-1347259	True	NA	-10	True	AATGAA	-16	NA	1351878	1349239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
WTC11_00032715	chr16	-	649	4	FSM	ENSG00000007520.4	ENST00000566296.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	278.619214460645	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATATTTTTGAGGCTGG	-1346854	False	NA	NA	False	AAGAAA	-27	NA	1351473	1349425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1349609_1350057_1350235_1350806_1351001_1351378
WTC11_00032716	chr16	-	5254	15	FSM	ENSG00000059145.19	ENST00000389221.9	5250	15	0	-4	0	4	multi-exon	FALSE	canonical	2	11	junction_6	27.1101306465585	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTCTCTGAGCACA	-1412501	False	2203	-8	True	ATTAAA	-18	NA	1414704	1363200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
WTC11_00032717	chr16	-	3976	6	FSM	ENSG00000059145.19	ENST00000674376.1	2184	6	-2	-1790	-2	0	multi-exon	FALSE	canonical	3	34	junction_1	22.9817318755572	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	-1378357	True	NA	-12	True	ATTAAA	-14	NA	1379685	1363204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
WTC11_00032721	chr16	-	1022	2	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50696	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	-1418544	True	NA	NA	False	NA	NA	NA	1420747	1369055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369082_1419751
WTC11_00032722	chr16	-	952	3	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	-1418553	True	NA	NA	False	NA	NA	NA	1420756	1369055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369082_1419751_1420613_1420691
WTC11_00032723	chr16	-	1398	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	33	0	-14	0	multi-exon	FALSE	canonical	2	7	junction_1	8.01498596380555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	-1412515	False	2203	NA	False	AATAAA	-17	NA	1414718	1398304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
WTC11_00032726	chr16	-	4184	9	FSM	ENSG00000103249.18	ENST00000563642.6	4184	9	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	28.6039769962151	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGCTGCTTCTTGCCTTTT	-1451955	False	NA	0	True	AATAAA	-20	NA	1451969	1444933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1450667_1451622
WTC11_00032727	chr16	-	4169	25	FSM	ENSG00000103249.18	ENST00000382745.9	4168	25	0	-1	0	0	multi-exon	FALSE	canonical	3	220	junction_19	25.9405035074923	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGCTGCTTCTTGCCTTTT	-1470182	True	NA	0	True	AATAAA	-20	NA	1475028	1444933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
WTC11_00032736	chr16	-	5234	31	FSM	ENSG00000187535.14	ENST00000426508.7	5232	31	0	-2	0	2	multi-exon	FALSE	canonical	3	25	junction_30	23.5711688297377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCCCTGTCCCATCCCG	-1611051	True	NA	1	True	AATAAA	-21	NA	1612072	1510424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1511151_1518215_1518358_1519880_1520048_1520130_1520344_1520601_1520809_1523517_1523701_1523827_1523957_1524551_1524696_1524783_1524917_1525230_1525327_1525886_1526078_1526618_1526797_1557934_1558135_1561984_1562117_1563996_1564163_1566160_1566292_1568216_1568335_1571406_1571535_1580758_1580851_1583313_1583387_1584216_1584421_1586129_1586276_1587197_1587305_1587932_1588025_1589604_1589781_1592175_1592319_1592466_1592589_1602369_1602592_1607119_1607298_1610663_1610854_1611967
WTC11_00032737	chr16	-	414	2	FSM	ENSG00000187535.14	ENST00000568837.1	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCTGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	1520038	1518101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1518358_1519880
WTC11_00032738	chr16	-	723	1	FSM	ENSG00000280231.1	ENST00000624488.1	476	1	90	-337	90	337	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGACAGAGACACAGAG	NA	False	NA	NA	False	AAAAAG	-19	NA	1554040	1553317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1553300_1554000
WTC11_00032740	chr16	-	1791	1	FSM	ENSG00000280327.1	ENST00000623878.1	1656	1	-67	-68	-67	68	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAATTGTTACAAATC	NA	False	NA	NA	False	NA	NA	NA	1578438	1576647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1576600_1578400
WTC11_00032741	chr16	-	670	4	NIC	ENSG00000103024.8	novel	848	5	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	175.342205098741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771216	False	NA	-6	True	AATAAA	-40	NA	1771295	1770319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1770767_1770888_1770994_1771069_1771172_1771279
WTC11_00032742	chr16	-	1029	3	FSM	ENSG00000103024.8	ENST00000561637.5	1014	3	0	-15	0	0	multi-exon	FALSE	canonical	3	448	junction_2	37.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771459	False	39727	-6	True	AATAAA	-40	NA	1771538	1770319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069
WTC11_00032743	chr16	-	852	5	FSM	ENSG00000103024.8	ENST00000219302.8	848	5	0	-4	0	4	multi-exon	TRUE	canonical	3	395	junction_4	50.6186724440695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACGTTAAGACATTTATTA	-1771464	False	39727	-2	True	AATAAA	-44	NA	1771543	1770315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279_1771411_1771488
WTC11_00032744	chr16	-	944	4	FSM	ENSG00000103024.8	ENST00000563498.1	920	4	0	-24	0	0	multi-exon	FALSE	canonical	3	404	junction_3	49.1279508585037	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771482	False	39727	-6	True	AATAAA	-40	NA	1771561	1770319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279
WTC11_00032745	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	52.5124323903926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	-1771478	False	39727	-63	True	NA	NA	NA	1771557	1770376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
WTC11_00032746	chr16	-	931	2	FSM	ENSG00000103024.8	ENST00000565379.1	911	2	0	-20	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	-1771434	False	39727	-147	True	NA	NA	NA	1771513	1770460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770888
WTC11_00032747	chr16	-	891	3	FSM	ENSG00000103024.8	ENST00000563367.1	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	64	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	-1771464	False	39727	-147	True	NA	NA	NA	1771543	1770460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1771411_1771488
WTC11_00032748	chr16	-	1041	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	-1	0	1	multi-exon	FALSE	canonical	3	276	junction_1	1257	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGGTGTCTTTGCGCTC	-1733423	True	NA	-3	True	AATAAA	-20	NA	1773150	1771888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772535_1772603_1772647_1772798
WTC11_00032749	chr16	-	714	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	-1	0	0	multi-exon	FALSE	canonical	3	2938	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	-1769628	False	NA	-9	True	AATAAA	-14	NA	1772698	1771894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772514_1772603
WTC11_00032750	chr16	-	1001	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	-3	0	-2	multi-exon	FALSE	canonical	3	2790	junction_2	74	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTCGTGGTGTCTTTGCG	-1733407	True	NA	-6	True	AATAAA	-17	NA	1773134	1771891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772514_1772603_1772647_1772798
WTC11_00032751	chr16	-	2318	6	FSM	ENSG00000162032.16	ENST00000564709.5	2316	6	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_5	142.032953922672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-1779435	True	NA	-2	True	AATAAA	-25	NA	1782505	1776711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1781765
WTC11_00032753	chr16	-	1636	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	-8	0	2	multi-exon	FALSE	canonical	3	212	junction_5	71.2336998898695	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGTGAGCTGAAACGTAT	-1779487	True	NA	0	True	AATAAA	-27	NA	1782557	1776709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
WTC11_00032754	chr16	-	1537	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	-2	0	2	multi-exon	FALSE	canonical	3	212	junction_6	74.2914680311422	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGTGAGCTGAAACGTAT	-1779501	True	NA	0	True	AATAAA	-27	NA	1782571	1776709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
WTC11_00032755	chr16	-	1756	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	-10	0	0	multi-exon	FALSE	canonical	3	212	junction_4	77.9274502341761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-1779524	True	NA	-2	True	AATAAA	-25	NA	1782594	1776711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
WTC11_00032756	chr16	-	1449	6	FSM	ENSG00000162032.16	ENST00000301717.8	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	67.9782318098963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGCAATAAATGTAGAG	-1781495	False	NA	-39	True	NA	NA	NA	1781516	1776748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357
WTC11_00032757	chr16	-	1703	5	FSM	ENSG00000162032.16	ENST00000563668.5	1509	5	-194	0	-187	0	multi-exon	FALSE	canonical	3	290	junction_3	52.3276934328277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGCATGCTGTCAGC	-1781682	False	NA	-85	True	NA	NA	NA	1781703	1776794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357
WTC11_00032760	chr16	-	2640	9	FSM	ENSG00000063854.13	ENST00000397356.8	2619	9	0	-21	0	21	multi-exon	FALSE	canonical	3	149	junction_8	30.0891903347365	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAATTTTAACAGCC	-1825085	True	NA	NA	False	NA	NA	NA	1826825	1807607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
WTC11_00032761	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	77.2395663975656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-1825101	True	NA	-5	True	NA	NA	NA	1826841	1809102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
WTC11_00032764	chr16	-	1289	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	0	70766	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.07131866775	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCATTTTGTTCAGCA	-1938164	True	NA	NA	False	NA	NA	NA	1943195	1867462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1867491_1938240_1939144_1940777_1940893_1941256_1941406_1943101
WTC11_00032765	chr16	-	1371	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	-94	0	-94	0	multi-exon	FALSE	canonical	3	304	junction_3	21.202725191719	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-1938262	True	NA	-5	True	AATGAA	-14	NA	1943293	1938228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
WTC11_00032766	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	35178	junction_6	8060.65561160436	5361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-1202565	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
WTC11_00032767	chr16	-	924	5	FSM	ENSG00000140988.16	ENST00000526522.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_2	21005.0885546217	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTTTTTCCCGTGTC	-1964660	False	NA	-26	True	AATAAA	-16	NA	1964803	1962059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1963148_1963257_1964275_1964366_1964448
WTC11_00032768	chr16	-	878	3	FSM	ENSG00000140988.16	ENST00000526586.6	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	53482	junction_1	548	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1963113	False	NA	-27	True	AATAAA	-15	NA	1963256	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962657_1962735_1962910_1963148
WTC11_00032769	chr16	-	625	4	FSM	ENSG00000140988.16	ENST00000533186.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	1743	junction_3	24644.6140746592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964213	False	NA	-27	True	AATAAA	-15	NA	1964356	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1964275
WTC11_00032770	chr16	-	1114	5	FSM	ENSG00000140988.16	ENST00000533872.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	38190	junction_3	6589.69802039517	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964438	False	NA	-27	True	AATAAA	-15	NA	1964581	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1963257_1964275_1964366_1964448
WTC11_00032771	chr16	-	1548	6	FSM	ENSG00000140988.16	ENST00000531065.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	1	134	junction_4	21395.5323037311	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964488	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1963652_1964366_1964448
WTC11_00032772	chr16	-	765	5	FSM	ENSG00000140988.16	ENST00000530225.5	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	21661.8581194573	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964488	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962735_1962910_1963148_1963257_1964275_1964366_1964448
WTC11_00032773	chr16	-	1243	4	FSM	ENSG00000140988.16	ENST00000527871.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	38190	junction_2	7120.5425511138	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964488	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1963257_1964275_1964366_1964448
WTC11_00032774	chr16	-	1186	5	FSM	ENSG00000140988.16	ENST00000533161.5	1186	5	0	0	0	0	multi-exon	FALSE	canonical	3	38190	junction_3	6771.59508535471	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964670	False	NA	-27	True	AATAAA	-15	NA	1964813	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962910_1963148_1963257_1964275_1964366_1964448
WTC11_00032775	chr16	-	993	5	FSM	ENSG00000140988.16	ENST00000529806.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	2	567	junction_4	26572.078601184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAATTAAGCGTGTT	-1964669	False	NA	-45	True	AAGAAA	-3	NA	1964812	1962078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962266_1962496_1962657_1962735_1962910_1963148_1963257_1964448
WTC11_00032779	chr16	-	653	2	FSM	ENSG00000196408.12	ENST00000569739.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCGTCTAAGCGTGC	-1979417	False	NA	-12	True	AGTAAA	-16	NA	1979644	1978916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1979350_1979424
WTC11_00032780	chr16	-	3364	12	FSM	ENSG00000167962.15	ENST00000652647.1	3362	12	2	-4	2	4	multi-exon	FALSE	canonical	3	85	junction_4	32.6448456944312	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCTGAGCTTCTCTG	-2007876	True	NA	-3	True	AATAAA	-26	NA	2009812	1997649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00032781	chr16	-	3382	11	FSM	ENSG00000167962.15	ENST00000562988.5	3382	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	54.4136012408662	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	-2007828	True	NA	-7	True	AATAAA	-22	NA	2009764	1997653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001591_2001701_2002205_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00032782	chr16	-	3249	12	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	33	-2	intron_retention	FALSE	canonical	3	39	junction_6	51.8905395922374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGCTGGTGTTCTGAGC	-2007795	True	NA	-10	True	AATAAA	-19	NA	2009731	1997656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001591_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00032792	chr16	-	810	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	-8	0	2	multi-exon	FALSE	canonical	3	12	junction_3	283.617149516738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGATGTCTGTCCCT	-2041511	True	NA	1	True	AATAAA	-25	NA	2047778	2039812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
WTC11_00032794	chr16	-	1069	6	FSM	ENSG00000065057.9	ENST00000219066.5	1067	6	0	-2	0	2	multi-exon	FALSE	canonical	3	617	junction_3	22.7209154745138	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGATGTCTGTCCCT	-2041599	True	NA	1	True	AATAAA	-25	NA	2047866	2039812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
WTC11_00032795	chr16	-	911	1	FSM	ENSG00000065057.9	ENST00000623977.1	911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTGTGATCTCAGCT	-2041580	True	NA	NA	False	NA	NA	NA	2047847	2046936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2046900_2047800
WTC11_00032796	chr16	-	2633	7	ISM	ENSG00000008710.20	ENST00000262304.9	14140	46	43739	0	11	0	3prime_fragment	FALSE	canonical	3	58	junction_6	15.1520075677559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTCTATGTCTGTG	-2092149	False	NA	-20	True	AATAAA	-19	NA	2092159	2088707	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046
WTC11_00032797	chr16	-	2452	8	NNC	ENSG00000008710.20	novel	14140	46	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	28.9897941225064	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCAATCTGTGCCTCT	-2092160	False	NA	-29	True	AATAAA	-10	NA	2092170	2088716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2089946_2090128_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046
WTC11_00032798	chr16	-	1140	3	FSM	ENSG00000008710.20	ENST00000472577.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTTGGGAAGGACAC	-2090829	False	NA	NA	False	TTTAAA	-40	NA	2090839	2089526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2090195_2090284_2090591_2090673
WTC11_00032800	chr16	-	696	3	FSM	ENSG00000008710.20	ENST00000485120.1	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTACGCCCGTCCCCG	-2092587	False	NA	NA	False	NA	NA	NA	2092597	2091427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2091598_2091780_2092189_2092479
WTC11_00032812	chr16	-	338	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	9	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTTCTCTCAAGTGTC	-2149463	True	NA	-5	True	AATAAA	-19	NA	2155358	2154800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2154923_2155142
WTC11_00032813	chr16	-	341	3	FSM	ENSG00000167971.16	ENST00000562055.1	435	3	0	94	0	-94	multi-exon	FALSE	canonical	1	2	junction_1	0.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGGGTTCAGCAGCAG	-2189423	False	NA	NA	False	NA	NA	NA	2189496	2188990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2189158_2189237_2189334_2189418
WTC11_00032814	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	11.034491379307	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-2204821	False	NA	0	True	AATAAA	-15	NA	2210863	2209252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
WTC11_00032815	chr16	-	4540	7	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	0	-70	intron_retention	FALSE	canonical	3	44	junction_3	521.026684110858	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCATCGACATCTGCT	-2208798	True	NA	NA	False	NA	NA	NA	2214840	2209431	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782_2214054_2214137
WTC11_00032816	chr16	-	555	3	FSM	ENSG00000182685.8	ENST00000566018.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCGGCTGCTGGTGGAT	-2204863	False	NA	NA	False	NA	NA	NA	2210905	2209978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2210282_2210521_2210651_2210782
WTC11_00032817	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-2208798	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2214054_2214137
WTC11_00032818	chr16	-	1507	7	FSM	ENSG00000167969.13	ENST00000301729.9	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_6	107.867846099856	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAACAAAGGTTTTT	-2243571	True	NA	NA	False	NA	NA	NA	2251587	2239401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
WTC11_00032820	chr16	-	961	6	FSM	ENSG00000167969.13	ENST00000566379.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_2	50.7369687703158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCAGAAGTCCCTGC	-2243575	True	NA	NA	False	NA	NA	NA	2251591	2240036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315
WTC11_00032824	chr16	-	2069	8	FSM	ENSG00000205937.12	ENST00000397086.6	2069	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_7	1145.62539733562	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	-2267200	False	27273	79	True	AATAAA	-24	NA	2267848	2253115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267662
WTC11_00032825	chr16	-	2038	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	-1	0	0	multi-exon	FALSE	canonical	3	1433	junction_6	696.613873597769	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	-2267749	True	NA	79	True	AATAAA	-24	NA	2268397	2253115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
WTC11_00032826	chr16	-	1954	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	-3	0	0	multi-exon	FALSE	canonical	3	902	junction_7	960.07244624602	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-2267478	False	NA	78	True	AATAAA	-23	NA	2268126	2253116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
WTC11_00032827	chr16	-	2229	2	FSM	ENSG00000205937.12	ENST00000562205.1	2223	2	0	-6	0	0	multi-exon	FALSE	canonical	3	3191	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-2256811	False	NA	78	True	AATAAA	-23	NA	2256866	2253116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584
WTC11_00032828	chr16	-	4965	7	FSM	ENSG00000205937.12	ENST00000565870.5	1514	7	-2602	-849	0	0	multi-exon	FALSE	canonical	3	1492	junction_6	674.84946881179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAATCTAGTTCTGGGTT	-2267204	False	27273	69	True	AATAAA	-14	NA	2267852	2253125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572
WTC11_00032835	chr16	-	6609	33	FSM	ENSG00000167972.14	ENST00000301732.10	6602	33	0	-7	0	7	multi-exon	FALSE	canonical	3	31	junction_19	7.84393675076489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGTCACACGCGCGA	-2340002	True	NA	4	True	AATAAA	-23	NA	2340728	2275873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2276806_2277596_2277671_2277878_2278070_2278287_2278459_2278942_2279131_2281026_2281222_2281380_2281510_2283185_2283359_2284278_2284438_2284778_2284999_2285441_2285647_2286693_2286968_2288025_2288330_2289433_2289621_2292139_2292239_2295589_2295741_2297328_2297540_2297765_2297922_2298385_2298541_2299402_2299533_2300004_2300149_2303968_2304151_2308449_2308624_2317282_2317404_2317647_2317765_2319580_2319841_2323522_2323689_2324403_2324532_2326009_2326275_2326412_2326493_2328452_2328758_2329647_2329855_2340572
WTC11_00032836	chr16	-	1179	6	FSM	ENSG00000167972.14	ENST00000567910.1	1205	6	0	26	0	-26	multi-exon	FALSE	canonical	3	35	junction_2	4.83321838943783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATACGTGTGCATGTG	NA	False	NA	NA	False	NA	NA	NA	2329724	2323364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2323689_2324403_2324532_2326009_2326275_2326412_2326493_2328452_2328758_2329647
WTC11_00032837	chr16	-	1143	1	FSM	ENSG00000260095.1	ENST00000561653.1	397	1	-213	-533	-213	533	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGGATGGAGAAGCAGCA	-2453085	False	NA	NA	False	NA	NA	NA	2453190	2452047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2452000_2453200
WTC11_00032838	chr16	-	1070	1	FSM	ENSG00000259895.1	ENST00000563775.1	3264	1	1704	490	1704	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACACCCGGCCCACTT	-2466401	False	NA	NA	False	NA	NA	NA	2466509	2465439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2465400_2466500
WTC11_00032839	chr16	-	2387	9	FSM	ENSG00000205918.9	ENST00000382326.5	2387	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	17.1518949390439	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGGCTGCTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	2643296	2616120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2616774_2618481_2618579_2618821_2618891_2622689_2622766_2633738_2633837_2634494_2634640_2638283_2638422_2638669_2638713_2642228
WTC11_00032840	chr16	-	5001	1	FSM	ENSG00000260565.8	ENST00000619862.1	5001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGTTGTCTTGTGTCTT	-2665059	False	NA	0	True	NA	NA	NA	2665350	2660349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2660300_2665400
WTC11_00032841	chr16	-	6442	4	FSM	ENSG00000260565.8	ENST00000656684.1	6491	4	1	48	1	-13	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCGGTCTCCGCACATT	-2673121	True	NA	-59	True	NA	NA	NA	2673412	2660408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2663408_2669410_2672571_2672706_2672860_2673282
WTC11_00032842	chr16	-	998	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	-1	0	0	multi-exon	FALSE	canonical	3	7310	junction_1	724.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700795	True	NA	-3	True	AATAAA	-16	NA	2777195	2771413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775557_2776992
WTC11_00032843	chr16	-	591	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	-32	23	-20	-22	multi-exon	FALSE	canonical	3	63	junction_1	3294.45192710411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAACAGTCTACAGAC	-2700909	True	NA	-26	True	GGGGCT	-40	NA	2777309	2771436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
WTC11_00032844	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	5348	junction_3	1397.77465995059	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700880	True	NA	-3	True	AATAAA	-16	NA	2777280	2771413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
WTC11_00032845	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	3639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	-2700727	True	NA	-5	True	AATAAA	-18	NA	2777127	2771940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775626_2776992
WTC11_00032846	chr16	-	1424	4	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	61349	intron_retention	FALSE	non_canonical	0	0	junction_1	1898.34600522548	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTAGCCGGGGGTGG	-2980523	True	NA	NA	False	TATAAA	-32	NA	3018183	2953362	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953396_2999479_2999505_3014711_3016043_3018148
WTC11_00032847	chr16	-	1425	4	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	61349	intron_retention	FALSE	non_canonical	0	0	junction_1	1898.34600522548	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTAGCCGGGGGTGG	-2980523	True	NA	NA	False	TATAAA	-32	NA	3018183	2953362	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953397_2999479_2999505_3014711_3016043_3018148
WTC11_00032848	chr16	-	739	2	FSM	ENSG00000127564.17	ENST00000574680.1	717	2	0	-22	0	0	multi-exon	TRUE	canonical	3	620	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2973587	False	NA	-6	True	AATAAA	-45	NA	2973602	2972790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137
WTC11_00032850	chr16	-	929	5	FSM	ENSG00000127564.17	ENST00000575981.1	910	5	0	-19	0	0	multi-exon	FALSE	canonical	3	533	junction_4	42.3578505120361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2974759	False	NA	-6	True	AATAAA	-45	NA	2974795	2972790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549
WTC11_00032851	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	181.416948973904	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2980355	False	9073	-6	True	AATAAA	-45	NA	2980391	2972790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
WTC11_00032852	chr16	-	2078	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	-17	0	0	multi-exon	FALSE	canonical	3	472	junction_7	57.0360357581065	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2971373	True	NA	-6	True	AATAAA	-45	NA	2980446	2972790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
WTC11_00032854	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	189.988445372344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-2971366	True	NA	-64	True	NA	NA	NA	2980439	2972848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
WTC11_00032855	chr16	-	1893	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	-2	0	0	multi-exon	FALSE	canonical	3	65	junction_7	171.8245835147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-2971406	True	NA	-64	True	NA	NA	NA	2980479	2972848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
WTC11_00032863	chr16	-	670	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	-14	0	14	multi-exon	FALSE	canonical	3	380	junction_3	151.836169018525	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGGCTTTTGGGGATG	-3020013	True	NA	8	True	AATAAA	-33	NA	3023942	3022610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
WTC11_00032864	chr16	-	632	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	-14	0	14	multi-exon	FALSE	canonical	3	209	junction_2	261.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGGCTTTTGGGGATG	-3020032	True	NA	8	True	AATAAA	-33	NA	3023961	3022610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023846
WTC11_00032865	chr16	-	843	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	-15	0	14	multi-exon	FALSE	canonical	3	94	junction_3	260.926554161639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGGCTTTTGGGGATG	-3024197	False	NA	8	True	AATAAA	-33	NA	3024215	3022610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
WTC11_00032866	chr16	-	1213	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	-14	0	14	multi-exon	FALSE	canonical	3	94	junction_2	319	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGGCTTTTGGGGATG	-3024057	True	NA	8	True	AATAAA	-33	NA	3024269	3022610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023969_3024180
WTC11_00032867	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	-3024243	False	NA	-44	True	NA	NA	NA	3024261	3022662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232
WTC11_00032868	chr16	-	858	5	FSM	ENSG00000103145.11	ENST00000574980.5	845	5	0	-13	0	0	multi-exon	FALSE	canonical	2	2	junction_4	260.500959691131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	-3024243	False	NA	-44	True	NA	NA	NA	3024261	3022662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3024133_3024211
WTC11_00032870	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	227.003854592824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-3024268	False	NA	NA	False	NA	NA	NA	3024286	3022917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
WTC11_00032871	chr16	-	3202	7	FSM	ENSG00000162069.16	ENST00000572240.5	3202	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	8.9333955221716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-3030281	False	NA	92	True	AAAAAG	-28	NA	3031974	3027681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3030596_3030695_3030813_3030934
WTC11_00032873	chr16	-	2032	10	FSM	ENSG00000162069.16	ENST00000572449.6	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	27.2274371422162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-3035251	True	NA	92	True	AAAAAG	-28	NA	3036944	3027681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214_3035527_3036893
WTC11_00032877	chr16	-	560	2	FSM	ENSG00000261971.9	ENST00000572427.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCTCCAGCTGCCGGT	-3058818	True	NA	NA	False	NA	NA	NA	3059308	3058455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3058703_3058995
WTC11_00032878	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	176.978642779291	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086768	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
WTC11_00032879	chr16	-	2247	5	FSM	ENSG00000130182.8	ENST00000575108.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	287.746741945065	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-3086766	True	NA	-35	True	ATTAAA	-27	NA	3099292	3088893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3099189
WTC11_00032880	chr16	-	2444	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	1	-95	0	0	multi-exon	FALSE	canonical	3	137	junction_3	231.712645317428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-3086768	True	NA	-35	True	ATTAAA	-27	NA	3099294	3088893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
WTC11_00032885	chr16	-	2274	2	FSM	ENSG00000263072.9	ENST00000573414.2	573	2	-1635	-66	752	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGTGTCTGTCAGTTT	-3130641	False	NA	49	True	NA	NA	NA	3131301	3125533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3125967_3129460
WTC11_00032888	chr16	-	1579	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	13	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-3134209	True	NA	NA	False	NA	NA	NA	3134869	3128671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746_3132104_3134629
WTC11_00032889	chr16	-	2013	2	FSM	ENSG00000263072.9	ENST00000653148.1	2013	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-3132307	False	NA	-33	True	NA	NA	NA	3132967	3128861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746
WTC11_00032891	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	-3134167	True	NA	-12	True	CATAAA	-17	NA	3134827	3131667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3132104_3134629
WTC11_00032892	chr16	-	925	1	FSM	ENSG00000261889.1	ENST00000570843.1	748	1	-129	-48	-129	48	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGAGACTACGTCT	-3157557	False	NA	NA	False	NA	NA	NA	3157612	3156687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3156700_3157600
WTC11_00032893	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	16.1709616287962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3234160	True	NA	-8	True	NA	NA	NA	3235158	3222324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
WTC11_00032894	chr16	-	3368	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	-20	0	0	multi-exon	FALSE	canonical	3	29	junction_4	13.4721935853075	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3234169	True	NA	-8	True	NA	NA	NA	3235167	3222324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
WTC11_00032898	chr16	-	3434	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	-13	0	13	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAATTCATTTTTTTA	-3304617	True	NA	13	True	AATACA	-34	NA	3305430	3298794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3302010_3305211
WTC11_00032899	chr16	-	2498	5	ISM	ENSG00000140987.21	ENST00000396852.9	3108	7	7190	-3	0	-1	3prime_fragment	FALSE	canonical	3	45	junction_4	5.33853912601566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCCTTTGGTTGTAAT	-3392274	False	NA	-1	True	AATAAA	-20	NA	3393814	3382081	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648
WTC11_00032900	chr16	-	3193	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	-16	-69	5	65	multi-exon	FALSE	canonical	3	45	junction_4	6.82316316348624	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATGTATGTAAGTGT	-3399480	True	NA	65	True	NA	NA	NA	3401020	3382015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
WTC11_00032901	chr16	-	2747	4	FSM	ENSG00000140987.21	ENST00000618425.4	2788	4	40	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_2	20.8486610281492	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCCTTTGGTTGTAAT	-3399485	True	NA	-1	True	AATAAA	-20	NA	3401025	3382081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
WTC11_00032905	chr16	-	5516	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	5	-38	5	38	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGGTTAATTTTGA	-3443183	True	NA	NA	False	AATGAA	-35	NA	3443499	3432375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
WTC11_00032906	chr16	-	7315	15	FSM	ENSG00000188827.11	ENST00000294008.4	7315	15	10	-10	10	10	multi-exon	FALSE	canonical	3	13	junction_14	8.1928291193941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCCAGGGAGACCACGA	-3610346	True	NA	-4	True	AATAAA	-31	NA	3611596	3581170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3582694_3583096_3583511_3584768_3584872_3589001_3591311_3592698_3592866_3594452_3594600_3595604_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3601192_3602117_3602308_3606473_3606699_3608429_3609567_3611559
WTC11_00032907	chr16	-	3228	7	FSM	ENSG00000188827.11	ENST00000466154.5	3228	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.19722101554181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGTAAGAACTGGCTC	-3608009	False	NA	NA	False	NA	NA	NA	3609259	3595610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3602308_3606473_3606699_3608429
WTC11_00032908	chr16	-	3087	4	FSM	ENSG00000188827.11	ENST00000486524.1	3075	4	0	-12	0	12	multi-exon	FALSE	canonical	3	13	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	-3610335	True	NA	NA	False	NA	NA	NA	3611585	3600608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3602308_3606473_3606699_3608429_3609567_3611559
WTC11_00032909	chr16	-	2472	19	Fusion	ENSG00000263235.1_ENSG00000126602.11	novel	2223	18	NA	NA	0	0	multi-exon	TRUE	canonical	1	32	junction_1	448.349211477057	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTCTTTTCTTTTT	-3692681	True	NA	-15	True	AATAAA	-16	NA	3717513	3650635	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_3650912_3658052_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
WTC11_00032911	chr16	-	2312	13	FSM	ENSG00000126602.11	ENST00000575671.5	2309	13	0	-3	0	2	multi-exon	FALSE	canonical	3	1682	junction_11	119.954939456448	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGGCTTTTTTTCT	-3678259	False	NA	0	True	TTTAAA	-20	NA	3678304	3658034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497
WTC11_00032913	chr16	-	2225	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	-2	0	2	multi-exon	FALSE	canonical	3	1682	junction_11	127.485123631759	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGGCTTTTTTTCT	-3692692	True	NA	0	True	TTTAAA	-20	NA	3717524	3658034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
WTC11_00032919	chr16	-	10857	31	FSM	ENSG00000005339.15	ENST00000262367.10	10790	31	-75	8	-75	-8	multi-exon	FALSE	canonical	3	40	junction_6	11.0330815681245	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAAAGATGGTTCAGAT	-3880771	False	NA	-35	True	AATAAA	-19	NA	3880788	3725061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751807_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683_3782927_3791980_3792095_3793385_3793627_3810602_3810780_3850296_3851010_3879831
WTC11_00032920	chr16	-	7598	30	FSM	ENSG00000005339.15	ENST00000382070.7	7598	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_26	15.4765750650188	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTGGTCTCTCTCTT	-3880103	False	NA	0	True	AATATA	-27	NA	3880120	3727538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751807_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683_3782927_3793385_3793627_3810602_3810780_3850296_3851010_3879831
WTC11_00032921	chr16	-	3316	23	FSM	ENSG00000005339.15	ENST00000570939.2	3316	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	14.3480928556739	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAGAGGAAAAAGGAAGAG	-3782844	False	NA	-5	True	NA	NA	NA	3782861	3736082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751837_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683
WTC11_00032923	chr16	-	922	3	FSM	ENSG00000005339.15	ENST00000573672.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTGGAGGCAGAAGGT	-3770684	False	NA	NA	False	AAAAAG	-39	NA	3770703	3767301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3767910_3769173_3769354_3770569
WTC11_00032926	chr16	-	7983	11	FSM	ENSG00000162104.10	ENST00000294016.8	7980	11	0	-3	0	3	multi-exon	FALSE	canonical	3	31	junction_3	9.7821265581672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGCCTGGTGTTTTCTT	-4116059	True	NA	NA	False	ATTAAA	-21	NA	4116442	3962649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3966967_3974668_3974711_3977481_3977631_3979115_3979276_3983231_3983441_3988993_3989097_3992145_3992364_3993405_3993511_4007367_4007559_4113749_4115486_4115689
WTC11_00032927	chr16	-	772	4	FSM	ENSG00000162104.10	ENST00000572288.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.9927524813074	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTTCCGCTGAGGTTC	-4114006	False	NA	NA	False	NA	NA	NA	4114026	3992221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3992364_3993348_3993511_4007367_4007559_4113749
WTC11_00032928	chr16	-	1252	1	FSM	ENSG00000090447.12	ENST00000575672.1	1613	1	361	0	361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4258418	False	NA	-4	True	AATAAA	-20	NA	4258437	4257185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4257200_4258400
WTC11_00032929	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.03364928200306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4270299	True	NA	-4	True	AATAAA	-20	NA	4273023	4257185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
WTC11_00032930	chr16	-	595	4	FSM	ENSG00000090447.12	ENST00000574639.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	30.4667396060396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCGTGAAGCCTGTC	-4270170	True	NA	NA	False	NA	NA	NA	4272894	4258188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4272657
WTC11_00032932	chr16	-	1949	1	FSM	ENSG00000262712.1	ENST00000574705.1	1949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGTCTTTAATAATG	-4337784	False	NA	NA	False	AATGAA	-17	NA	4337818	4335869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4335900_4337800
WTC11_00032933	chr16	-	704	4	FSM	ENSG00000217930.8	ENST00000573236.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_3	47.3168985552613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4334502	False	NA	-4	True	AATAAA	-16	NA	4343550	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206
WTC11_00032934	chr16	-	724	5	FSM	ENSG00000217930.8	ENST00000573553.5	722	5	0	-2	0	0	multi-exon	FALSE	canonical	3	64	junction_4	282.426096527924	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4334713	False	NA	-4	True	AATAAA	-16	NA	4343761	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482
WTC11_00032935	chr16	-	652	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	-2	0	0	multi-exon	FALSE	canonical	3	50	junction_3	281.665138062913	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4342222	True	NA	-4	True	AATAAA	-16	NA	4351270	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
WTC11_00032936	chr16	-	608	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_3	298.033869719534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4342267	True	NA	-4	True	AATAAA	-16	NA	4351315	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
WTC11_00032937	chr16	-	535	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	-2	0	0	multi-exon	FALSE	canonical	3	468	junction_4	112.247494404107	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4342273	True	NA	-4	True	AATAAA	-16	NA	4351321	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
WTC11_00032938	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	345.309844761033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	-4342245	True	NA	-73	True	AAAAAG	-22	NA	4351293	4340317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
WTC11_00032939	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_19	16.8420402857746	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-4415719	True	NA	-1	True	ATTAAA	-18	NA	4416596	4354541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
WTC11_00032944	chr16	-	805	4	FSM	ENSG00000153406.14	ENST00000571448.5	805	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.05872194857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTCCAGGAGAAGAGGA	-4466321	False	NA	-19	True	AATAAA	-18	NA	4466405	4461691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463419_4463513_4463659_4463851_4466152
WTC11_00032945	chr16	-	977	5	NIC	ENSG00000153406.14	novel	1233	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	172.051409468217	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTCCAGGAGAAGAGGA	-4471877	True	NA	-19	True	AATAAA	-18	NA	4474555	4461691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4461960_4466152_4466403_4469226_4469466_4474092_4474167_4474409
WTC11_00032946	chr16	-	1700	6	FSM	ENSG00000153406.14	ENST00000574733.5	1719	6	34	-15	25	15	multi-exon	FALSE	canonical	3	4	junction_5	173.839696272169	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTGCTTCCAGGACT	-4476188	True	NA	-3	True	AATAAA	-34	NA	4476272	4461675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474793_4476236
WTC11_00032947	chr16	-	888	5	NIC	ENSG00000153406.14	novel	1092	6	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	192.673785191447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471934	True	NA	-21	True	AATAAA	-16	NA	4474612	4461693	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4461960_4466152_4466403_4469226_4469466_4474092_4474167_4474553
WTC11_00032948	chr16	-	1233	6	FSM	ENSG00000153406.14	ENST00000404295.7	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	60.6478359053314	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471944	True	NA	-21	True	AATAAA	-16	NA	4474622	4461693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474409
WTC11_00032949	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	137.31860762475	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471947	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
WTC11_00032953	chr16	-	2891	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	-117	0	111	multi-exon	FALSE	canonical	3	456	junction_5	50.8999017680781	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTAAAGATCTTTGCA	-4533185	True	NA	NA	False	NA	NA	NA	4538470	4510557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
WTC11_00032954	chr16	-	2708	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	-2	0	2	multi-exon	FALSE	canonical	3	95	junction_5	192.394802424598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTTTTAAAACCCTT	-4537551	True	NA	28	True	AATACA	-5	NA	4538773	4510666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
WTC11_00032956	chr16	-	243	1	FSM	ENSG00000278434.1	ENST00000612995.1	1455	1	1200	12	1200	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGCCTGCATTTCAGCC	-4531248	False	NA	-11	True	AATAAA	-8	NA	4532470	4532227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4532200_4532500
WTC11_00032957	chr16	-	563	1	FSM	ENSG00000261612.1	ENST00000564581.1	315	1	-87	-161	-87	161	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGAATGAAGCTAATTG	-4563205	False	NA	NA	False	ATTAAA	-2	NA	4563215	4562652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4562700_4563200
WTC11_00032958	chr16	-	2663	1	FSM	ENSG00000153443.13	ENST00000590891.1	2641	1	0	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATACGAGGCTTGCTGC	-4611479	False	NA	18	True	NA	NA	NA	4611523	4608860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4608900_4611500
WTC11_00032959	chr16	-	1685	3	FSM	ENSG00000153443.13	ENST00000590965.1	1462	3	0	-223	0	223	multi-exon	FALSE	canonical	3	15	junction_2	138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGCTGGACAGATCC	-4609801	True	NA	NA	False	NA	NA	NA	4614874	4608659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610657_4614677
WTC11_00032960	chr16	-	1397	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	-23	0	22	multi-exon	FALSE	canonical	3	291	junction_1	3	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATACGAGGCTTGCTGC	-4609815	True	NA	18	True	NA	NA	NA	4614888	4608860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610556_4614677
WTC11_00032961	chr16	-	1297	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	-22	0	22	multi-exon	FALSE	canonical	3	16	junction_2	137.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATACGAGGCTTGCTGC	-4614386	True	NA	18	True	NA	NA	NA	4615027	4608860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610556_4614916
WTC11_00032964	chr16	-	3100	15	FSM	ENSG00000168096.15	ENST00000591653.5	3098	15	0	-2	0	0	multi-exon	FALSE	canonical	3	37	junction_14	33.8077548162295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	-4728046	False	NA	-2	True	AATAAA	-17	NA	4728078	4696509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978
WTC11_00032966	chr16	-	2545	17	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	36.083182976977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCTCAGTTCTGGT	-4734298	False	NA	-3	True	AATAAA	-16	NA	4734330	4696510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4734155
WTC11_00032968	chr16	-	2304	17	FSM	ENSG00000168096.15	ENST00000592077.5	2302	17	0	-2	0	0	multi-exon	FALSE	canonical	3	15	junction_16	49.3371294640254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	-4731951	True	NA	-2	True	AATAAA	-17	NA	4734219	4696509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4731511_4731580_4734155
WTC11_00032969	chr16	-	2272	15	FSM	ENSG00000168096.15	ENST00000450067.6	2272	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	38.6937214756174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	4734377	4696509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4729979_4730152_4734155
WTC11_00032970	chr16	-	2529	18	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_17	49.533114295032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-4731979	True	NA	-4	True	AATAAA	-15	NA	4734247	4696511	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4731511_4731580_4734155
WTC11_00032982	chr16	-	5841	6	FSM	ENSG00000103199.14	ENST00000219478.11	5824	6	0	-17	0	17	multi-exon	FALSE	canonical	3	18	junction_2	3.12409987036266	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCTGGACATGGTGG	-4766534	True	NA	NA	False	NA	NA	NA	4767162	4748221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762757_4765564_4766077_4767016
WTC11_00032984	chr16	-	3722	17	NNC	ENSG00000140632.17	novel	3718	16	NA	NA	0	27397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.765945428377	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGTAC	-4832846	True	NA	NA	False	NA	NA	NA	4847265	4775805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4775833_4803202_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00032985	chr16	-	3727	17	NNC	ENSG00000140632.17	novel	3527	18	NA	NA	0	27397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.765945428377	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGTAC	-4832852	True	NA	NA	False	NA	NA	NA	4847271	4775805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4775832_4803202_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00032988	chr16	-	2684	7	FSM	ENSG00000067836.13	ENST00000591292.5	2684	7	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	15.7524248574272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	-4802102	False	NA	-8	True	AATAAA	-15	NA	4802162	4796968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497
WTC11_00032989	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	19.2429207762231	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800017	True	NA	-7	True	AATAAA	-16	NA	4802633	4796967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
WTC11_00032998	chr16	-	3606	14	FSM	ENSG00000140632.17	ENST00000589389.5	3606	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	204.000899174257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4831791	False	NA	-1	True	AATAAA	-19	NA	4846210	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173
WTC11_00032999	chr16	-	3599	15	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_4	207.344249389999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832852	True	NA	-1	True	AATAAA	-19	NA	4847271	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00033000	chr16	-	3527	18	FSM	ENSG00000140632.17	ENST00000588732.5	3527	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	269.145385905695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832852	True	NA	-1	True	AATAAA	-19	NA	4847271	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4843403_4843603_4845073_4845154_4846173_4846211_4847227
WTC11_00033001	chr16	-	3466	15	FSM	ENSG00000140632.17	ENST00000436648.9	3466	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	202.317151007612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832860	True	NA	-1	True	AATAAA	-19	NA	4847279	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00033002	chr16	-	3718	16	FSM	ENSG00000140632.17	ENST00000321919.14	3718	16	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_6	80.0298833075635	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832869	True	NA	-1	True	AATAAA	-19	NA	4847288	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00033009	chr16	-	1091	1	FSM	ENSG00000275056.1	ENST00000614098.1	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCGGCTTGTTCTCAC	-4825915	False	NA	-2	True	AATAAA	-14	NA	4840334	4839243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4839200_4840300
WTC11_00033010	chr16	-	6251	22	FSM	ENSG00000118898.16	ENST00000345988.7	6251	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	8.95212765599112	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTCTTCTTTTGCA	-4935240	True	NA	0	True	AATAAA	-30	NA	4937148	4882506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4886048_4887134_4887228_4888101_4888219_4888977_4889062_4890183_4890335_4890727_4890922_4891810_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
WTC11_00033013	chr16	-	2192	10	FSM	ENSG00000103174.13	ENST00000312251.8	2203	10	10	1	1	-1	multi-exon	FALSE	canonical	3	44	junction_4	6.8005083324886	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGACTTAGGTCACTG	-5033453	True	NA	1	True	AATAAA	-44	NA	5033925	5024844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
WTC11_00033014	chr16	-	2272	11	FSM	ENSG00000103174.13	ENST00000562746.5	2260	11	0	-12	0	12	multi-exon	FALSE	canonical	1	1	junction_6	20.0159936051149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGATTCTGAATCAT	-5033446	True	NA	-14	True	AATAAA	-29	NA	5033918	5024859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028296_5028399_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
WTC11_00033015	chr16	-	2286	9	ISM	ENSG00000103174.13	ENST00000312251.8	2203	10	1	16	0	12	intron_retention	FALSE	canonical	3	44	junction_4	6.91804705101086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGATTCTGAATCAT	-5033462	True	NA	-14	True	AATAAA	-29	NA	5033934	5024859	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272
WTC11_00033016	chr16	-	2084	9	FSM	ENSG00000103174.13	ENST00000381955.7	2100	9	0	16	0	12	multi-exon	FALSE	canonical	0	0	junction_2	17.9613299897307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGATTCTGAATCAT	-5033462	True	NA	-14	True	AATAAA	-29	NA	5033934	5024859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027199_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
WTC11_00033017	chr16	-	2152	8	NIC	ENSG00000103174.13	novel	2260	11	NA	NA	0	3	intron_retention	FALSE	canonical	1	3	junction_6	17.7430641809867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGTGGTGTGTGGATT	-5033446	True	NA	-23	True	AATAAA	-20	NA	5033918	5024868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5031744_5031885_5033272
WTC11_00033019	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	102.272545042097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097340	True	NA	NA	False	NA	NA	NA	5097766	5085362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
WTC11_00033020	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.5035677752311	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	-5097316	True	NA	NA	False	NA	NA	NA	5097742	5085571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
WTC11_00033021	chr16	-	1001	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	9	1387	0	-56	multi-exon	FALSE	canonical	3	158	junction_5	49.6502050060507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACTTGGAGATGGCAAT	-5097360	True	NA	NA	False	NA	NA	NA	5097786	5085670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
WTC11_00033024	chr16	-	2288	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	-20	0	0	multi-exon	FALSE	canonical	3	88	junction_4	69.7075239044458	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-5097362	True	NA	NA	False	AATAAA	-37	NA	5097788	5084283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
WTC11_00033027	chr16	-	516	2	FSM	ENSG00000232258.7	ENST00000444171.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGCGGCCTCTTCTTCC	NA	False	NA	NA	False	GGGGCT	-32	NA	8572302	8569705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8570006_8572086
WTC11_00033028	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	-8796393	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8796591_8797611
WTC11_00033029	chr16	-	1760	1	NIC	ENSG00000184857.8	novel	1439	2	NA	NA	427	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACAGCCTACAGCAGAT	-8795966	False	NA	-11	True	AATAAA	-26	NA	8797212	8795452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_8795500_8797200
WTC11_00033030	chr16	-	1962	2	NNC	ENSG00000184857.8	novel	1439	2	NA	NA	-13	-268	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTACAGCAGATATTAT	-8796409	True	NA	-6	True	AATAAA	-31	NA	8797655	8795447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_8796591_8796836
WTC11_00033031	chr16	-	766	5	NNC	ENSG00000153048.11	novel	556	5	NA	NA	0	39084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	908.01469564099	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAAGGAGCTGGC	-8838668	True	NA	NA	False	NA	NA	NA	8869006	8813857	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_8813883_8854914_8855327_8858349_8858473_8859170_8859336_8868965
WTC11_00033032	chr16	-	2714	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	-5	0	0	multi-exon	FALSE	canonical	3	1448	junction_3	374.904728638564	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	-8838668	True	NA	-2	True	AATAAA	-22	NA	8869006	8852941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
WTC11_00033035	chr16	-	5831	31	FSM	ENSG00000187555.16	ENST00000344836.9	5831	31	0	0	0	0	multi-exon	FALSE	canonical	1	212	junction_5	117.482050638479	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTGTAATGTTTCC	-8959194	True	NA	-3	True	ATTAAA	-17	NA	8963906	8892096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923214_8923414_8930292_8930398_8963206
WTC11_00033036	chr16	-	4533	31	FSM	ENSG00000187555.16	ENST00000563961.5	4533	31	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_28	154.176165473137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGAGTTACGTGGAAG	-8963410	False	NA	-15	True	AATAAA	-21	NA	8963422	8892771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923353_8923414_8930292_8930398_8963206
WTC11_00033037	chr16	-	448	3	FSM	ENSG00000187555.16	ENST00000567113.5	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	212	junction_2	205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCGTTTTTGCTGAGGA	-8897207	False	NA	NA	False	NA	NA	NA	8897254	8895058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8895151_8895641_8895742_8896998
WTC11_00033044	chr16	-	3066	1	NIC	ENSG00000260362.1	novel	660	2	NA	NA	6893	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9667591	False	NA	NA	False	AATAAA	-22	NA	9669950	9666884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_9666900_9670000
WTC11_00033045	chr16	-	599	2	FSM	ENSG00000183454.18	ENST00000637393.1	833	2	0	234	0	194	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAAGGGCTTGTTGTC	-10179892	False	NA	NA	False	NA	NA	NA	10180003	9937958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9938552_10179997
WTC11_00033046	chr16	-	5027	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	70	0	-70	multi-exon	FALSE	canonical	3	156	junction_1	3.03108891324554	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTCATCAAGATAATAA	-10578905	True	NA	79	True	NA	NA	NA	10580598	10528491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
WTC11_00033047	chr16	-	3118	6	FSM	ENSG00000166676.17	ENST00000572428.5	3256	6	0	138	0	-133	multi-exon	FALSE	canonical	3	10	junction_4	4.66476151587624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGTACCTCAAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	10774996	10766813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10769479_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951
WTC11_00033048	chr16	-	1574	2	FSM	ENSG00000182108.11	ENST00000331808.5	1569	2	0	-5	0	5	multi-exon	FALSE	canonical	3	253	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCCTGCCTTTTTTTTT	-10941404	True	NA	4	True	ATTAAA	-27	NA	10942468	10928885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10929560_10941568
WTC11_00033049	chr16	-	1413	3	FSM	ENSG00000182108.11	ENST00000570992.1	626	3	-736	-51	6	0	multi-exon	FALSE	canonical	3	42	junction_1	105.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	-10941390	True	NA	-1	True	ATTAAA	-22	NA	10942454	10928890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10929075_10929216_10929560_10941568
WTC11_00033050	chr16	-	5861	1	FSM	ENSG00000182108.11	ENST00000570440.2	5854	1	0	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGAAGTAATTTCAC	-10941396	True	NA	NA	False	ATTAAA	-24	NA	10942460	10936599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10936600_10942500
WTC11_00033051	chr16	-	2564	1	FSM	ENSG00000185338.7	ENST00000644787.1	1784	1	-284	-496	-280	496	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTAGTGAGTTTTTGGA	-11256470	False	NA	NA	False	NA	NA	NA	11256484	11253920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11253900_11256500
WTC11_00033052	chr16	-	1238	2	FSM	ENSG00000185338.7	ENST00000332029.4	1238	2	0	0	0	0	multi-exon	TRUE	canonical	3	878	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGTTTTCTA	-11250372	True	NA	6	True	AATAAA	-25	NA	11256204	11254416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11255529_11256078
WTC11_00033053	chr16	-	612	2	FSM	ENSG00000263080.1	ENST00000572706.1	505	2	-53	-54	-39	54	multi-exon	TRUE	canonical	3	14	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTACTTAAAAGATAAAT	-11345055	True	NA	NA	False	TATAAA	-14	NA	11345250	11344296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11344771_11345112
WTC11_00033054	chr16	-	3761	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	-160	-969	-160	969	multi-exon	FALSE	canonical	3	27	junction_3	272.833282427199	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATTCTGATTTGCCTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	11587723	11546752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
WTC11_00033055	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_3	99.6895180046528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	-11581443	True	NA	-8	True	AATAAA	-16	NA	11586919	11547721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
WTC11_00033056	chr16	-	3333	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	9	-2224	9	839	multi-exon	FALSE	canonical	3	144	junction_3	218.187992336884	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACCATTTGGCCTCAG	-11587191	False	NA	NA	False	TATAAA	-15	NA	11587238	11546882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
WTC11_00033060	chr16	-	3116	12	FSM	ENSG00000153066.13	ENST00000283033.10	3116	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	22.4595136204263	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-11741915	True	NA	-7	True	AATAAA	-24	NA	11742857	11679082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
WTC11_00033061	chr16	-	615	5	FSM	ENSG00000153066.13	ENST00000575591.1	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	28.7260770033083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCCCTGGCCCTGGA	-11735188	False	NA	NA	False	NA	NA	NA	11736130	11691989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11736016
WTC11_00033062	chr16	-	887	7	FSM	ENSG00000153066.13	ENST00000576969.5	863	7	0	-24	0	0	multi-exon	FALSE	canonical	3	37	junction_4	26.7124606795322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCCCTGGCCCTGGA	-11742535	False	NA	NA	False	NA	NA	NA	11742547	11691989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11733981_11734080_11736016_11736234_11742476
WTC11_00033064	chr16	-	2923	4	FSM	ENSG00000122299.12	ENST00000575984.1	2632	4	-284	-7	-284	0	multi-exon	FALSE	canonical	3	319	junction_3	13.4246870437348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCCTGTGGTCCTTTC	-11760102	False	NA	1	True	AATAAA	-25	NA	11760134	11750585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430
WTC11_00033066	chr16	-	3796	22	FSM	ENSG00000122299.12	ENST00000396516.6	3845	22	44	5	44	0	multi-exon	FALSE	canonical	3	236	junction_13	27.4826682138797	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTTTTTCCTGTGGTC	NA	False	NA	-4	True	AATAAA	-20	NA	11782508	11750590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286
WTC11_00033067	chr16	-	3816	23	FSM	ENSG00000122299.12	ENST00000355758.9	3805	23	0	-11	0	0	multi-exon	TRUE	canonical	3	225	junction_22	29.427316258007	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCCTGTGGTCCTTTC	-11794173	True	NA	1	True	AATAAA	-25	NA	11797258	11750585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11797123
WTC11_00033070	chr16	-	1964	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	767.583429333681	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAAAAGACCAGGT	-11830523	True	NA	NA	False	AAAAAG	-9	NA	11851519	11803693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803730_11837338_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
WTC11_00033071	chr16	-	1962	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	767.583429333681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAAAAGACCAGGT	-11830523	True	NA	NA	False	AAAAAG	-9	NA	11851519	11803693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803730_11837340_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
WTC11_00033072	chr16	-	2022	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	767.583429333681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAAAAGACCAGGT	-11830584	True	NA	NA	False	AAAAAG	-9	NA	11851580	11803693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803729_11837340_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
WTC11_00033073	chr16	-	5445	9	FSM	ENSG00000171490.13	ENST00000571133.6	5440	9	0	-5	0	5	multi-exon	FALSE	canonical	3	2056	junction_3	196.135157480754	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTAAGTCAATCCAACT	-11830546	True	NA	5	True	ATTAAA	-24	NA	11851542	11833844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
WTC11_00033074	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	826.031896404461	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-11830584	True	NA	NA	False	NA	NA	NA	11851580	11837717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
WTC11_00033078	chr16	-	7142	15	FSM	ENSG00000103342.13	ENST00000434724.7	7141	15	0	-1	0	1	multi-exon	FALSE	canonical	3	1628	junction_12	265.21546881349	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCGTTTGTAATTAC	-11898251	True	NA	-4	True	AATAAA	-24	NA	11915956	11868126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11915368
WTC11_00033079	chr16	-	2509	15	FSM	ENSG00000103342.13	ENST00000439887.6	2509	15	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_12	492.786972230395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCGGTATTTGAATT	-11898173	True	NA	-16	True	AATAAA	-16	NA	11915878	11872678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
WTC11_00033084	chr16	-	395	2	FSM	ENSG00000234719.9	ENST00000540412.1	389	2	0	-6	0	6	multi-exon	FALSE	canonical	3	362	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGAGGCTGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	11929343	11927588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11927880_11929239
WTC11_00033085	chr16	-	611	3	ISM	ENSG00000234719.9	ENST00000547494.5	921	8	12371	0	-37	0	3prime_fragment	FALSE	canonical	3	333	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTACTCAGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	11929674	11927594	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_11927880_11929239_11929276_11929384
WTC11_00033086	chr16	-	5647	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	7	-3661	0	-27	multi-exon	FALSE	canonical	0	0	junction_1	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAAATCTCTTTTCTTTG	-12803016	True	NA	NA	False	NA	NA	NA	12803844	12659825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_12665116_12781184_12781404_12803706
WTC11_00033087	chr16	-	6133	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	10	0	-10	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAATTACCCAGTCTCA	-12803059	True	NA	NA	False	ATTAAA	-11	NA	12803887	12659808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
WTC11_00033088	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	FALSE	canonical	1	107	junction_21	53.4902425602029	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629772	True	NA	-1	True	ATTAAA	-16	NA	14630260	14435700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
WTC11_00033090	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	81.5211942010773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	-14629788	True	NA	NA	False	NA	NA	NA	14630276	14436604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
WTC11_00033094	chr16	-	709	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	-17	-56	-17	56	multi-exon	FALSE	canonical	3	13	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTTGCTTTCCCTCC	NA	False	NA	NA	False	GATAAA	-9	NA	14694325	14672491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
WTC11_00033095	chr16	-	394	3	FSM	ENSG00000254609.1	ENST00000526173.1	355	3	-39	0	-39	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCCAGCAGCACCA	NA	False	NA	NA	False	NA	NA	NA	14733386	14727281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14727389_14729611_14729763_14733250
WTC11_00033096	chr16	-	2100	1	FSM	ENSG00000261819.1	ENST00000567634.1	1902	1	-63	-135	-63	135	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTGTGGATACACCAGAG	NA	False	NA	NA	False	NA	NA	NA	14990223	14988123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14988100_14990200
WTC11_00033097	chr16	-	2398	6	FSM	ENSG00000157045.9	ENST00000566542.5	2398	6	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_5	50.8700304698159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-15044974	False	NA	-10	True	AATAAA	-20	NA	15046054	15037853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333
WTC11_00033098	chr16	-	1213	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	-3	0	0	multi-exon	FALSE	canonical	3	536	junction_9	107.490338354227	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	15056074	15037853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
WTC11_00033099	chr16	-	1115	9	FSM	ENSG00000157045.9	ENST00000624579.3	1115	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	238.169057604047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	15056079	15037853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
WTC11_00033103	chr16	-	3717	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	-11	0	11	multi-exon	FALSE	canonical	3	212	junction_6	37.6545948339738	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTGTTTTTTTTT	-15093760	True	NA	-11	True	AATAAA	-27	NA	15094272	15060021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
WTC11_00033106	chr16	-	1299	9	FSM	ENSG00000188599.17	ENST00000534799.6	1214	9	-71	-14	-71	14	multi-exon	FALSE	canonical	3	11	junction_8	88.7482394191569	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	-15121963	False	NA	-4	True	AATAAA	-39	NA	15121973	15104297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15121843
WTC11_00033107	chr16	-	4508	16	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	92	intron_retention	FALSE	canonical	3	53	junction_15	66.1985565468681	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAACTCCCTGAGCCTCA	-15131700	False	NA	NA	False	NA	NA	NA	15131710	15104630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
WTC11_00033111	chr16	-	579	4	FSM	ENSG00000250251.6	ENST00000546358.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	98.7735907124077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	-15133835	True	NA	NA	False	NA	NA	NA	15133845	15132719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15132874_15133263_15133424_15133489_15133704_15133794
WTC11_00033112	chr16	-	3596	14	NNC	ENSG00000250251.6	novel	4769	24	NA	NA	-266	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	67.2233757596322	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	15154830	15132719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15133062_15133263_15133424_15133489_15133704_15133794_15134075_15134201_15134346_15135029_15135202_15135279_15135430_15135648_15136132_15136566_15136751_15136868_15137541_15137753_15137924_15138191_15138264_15138384_15138457_15154349
WTC11_00033117	chr16	-	1096	8	FSM	ENSG00000183793.14	ENST00000360151.9	1084	8	0	-12	0	12	multi-exon	FALSE	canonical	1	5	junction_7	126.484813963042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTTATTGCTTTGT	NA	False	NA	-5	True	AATAAA	-33	NA	15378294	15363615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15378231
WTC11_00033120	chr16	-	7761	27	NNC	ENSG00000166783.22	novel	7730	27	NA	NA	0	104	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	13.8371765769358	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCCCTTCTGGAAATAG	-15641257	True	NA	87	True	AATACA	-36	NA	15643108	15594282	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623097_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
WTC11_00033121	chr16	-	7721	27	FSM	ENSG00000166783.22	ENST00000396368.8	7730	27	9	0	-3	0	multi-exon	FALSE	canonical	3	25	junction_20	12.8000092455588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-15641294	True	NA	-17	True	AATAAA	-20	NA	15643145	15594386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
WTC11_00033125	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	61.7353221421902	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-15883692	True	NA	-9	True	AATAAA	-17	NA	15888603	15865718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
WTC11_00033126	chr16	-	2039	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	244	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGCAAAGGGTGT	-15883691	True	NA	-11	True	AATAAA	-15	NA	15888602	15865720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15884007_15884206_15888557
WTC11_00033127	chr16	-	851	4	FSM	ENSG00000133393.13	ENST00000573087.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	273.126751202115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTAGTTTTTGTATT	-15883714	True	NA	NA	False	AAAACA	-16	NA	15888625	15867068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15873490_15873628_15884007_15884206_15888557
WTC11_00033128	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	275.918264870032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-15883692	True	NA	35	True	AAAAAG	-21	NA	15888603	15867219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
WTC11_00033130	chr16	-	9385	13	NNC	ENSG00000103489.12	novel	9970	12	NA	NA	51	26600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8646803302686	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTACTACACTAGACCT	-17470890	False	NA	NA	False	NA	NA	NA	17470909	17075168	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_17075194_17102327_17109018_17117645_17117980_17127665_17127862_17134472_17134736_17138354_17138532_17141152_17141370_17158828_17158910_17198211_17198415_17200481_17200655_17258987_17259499_17358011_17358051_17470433
WTC11_00033131	chr16	-	9669	12	FSM	ENSG00000103489.12	ENST00000261381.7	9970	12	51	250	51	-250	multi-exon	FALSE	canonical	3	27	junction_8	6.6915513525738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACCCGTACTGAGTA	-17470890	False	NA	NA	False	NA	NA	NA	17470909	17102018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17109018_17117645_17117980_17127665_17127862_17134472_17134736_17138354_17138532_17141152_17141370_17158828_17158910_17198211_17198415_17200481_17200655_17258987_17259499_17358011_17358051_17470433
WTC11_00033132	chr16	-	1386	1	FSM	ENSG00000279410.1	ENST00000624763.1	1370	1	-79	63	-79	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGACTCACTTGAACTC	NA	False	NA	NA	False	NA	NA	NA	17194311	17192925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17192900_17194300
WTC11_00033133	chr16	-	1119	1	FSM	ENSG00000279415.1	ENST00000623371.1	978	1	-242	101	-242	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCGTCTTCACACCCCT	NA	False	NA	NA	False	NA	NA	NA	17228242	17227123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17227100_17228200
WTC11_00033134	chr16	-	4082	22	FSM	ENSG00000285628.1	ENST00000648391.1	4082	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	96.592206837657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCACCCTCAGCGGA	-18344240	False	NA	NA	False	NA	NA	NA	18344283	18318007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18318436_18319794_18319831_18319939_18320001_18321016_18321125_18324090_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339385_18339621_18339800_18339958_18340248_18340870_18341621_18341767_18342656_18342810_18343199_18343360_18343425_18343640_18343732_18344013_18344139
WTC11_00033135	chr16	-	391	5	FSM	ENSG00000214940.8	ENST00000545050.1	391	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	104.078095678197	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCATGCCTAACTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	18324235	18319257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18319299_18319794_18319831_18319939_18320001_18321016_18321125_18324090
WTC11_00033138	chr16	-	543	4	FSM	ENSG00000205746.9	ENST00000539740.1	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	15.6276108929747	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTGAGCGGGGTGT	-18346275	False	NA	NA	False	NA	NA	NA	18346318	18344139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18344284_18345377_18345512_18345863_18346040_18346229
WTC11_00033139	chr16	-	3411	10	ISM	ENSG00000205746.9	ENST00000525846.6	6405	31	-469	12556	-469	-2816	5prime_fragment	FALSE	canonical	3	87	junction_3	32.3354333033219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCGCCTGGCTAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	18352945	18346955	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18348016_18348488_18348737_18349091_18349219_18349628_18349745_18349932_18350154_18350587_18350772_18350889_18351562_18351773_18351944_18352211_18352284_18352404
WTC11_00033140	chr16	-	2155	13	NIC	ENSG00000233024.7	novel	1522	10	NA	NA	11	11	intron_retention	TRUE	canonical	1	3	junction_7	155.484636611539	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTATTGCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-36	NA	18379320	18358074	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18372722_18372855_18374831_18375070_18376952_18377164_18377257_18377402_18377487_18377659_18379154
WTC11_00033141	chr16	-	2909	17	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1648	0	intron_retention	TRUE	canonical	3	75	junction_15	106.136244251198	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18380979	18358120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380065_18380516_18380711_18380808
WTC11_00033142	chr16	-	671	6	FSM	ENSG00000233024.7	ENST00000528301.1	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	79.2984236917733	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGCCTACAAGCATCA	NA	False	NA	NA	False	NA	NA	NA	18368364	18359833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257
WTC11_00033143	chr16	-	1495	10	FSM	ENSG00000233024.7	ENST00000546267.5	1495	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	66.4028111854712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAGGCAGAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	18379331	18361224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154
WTC11_00033144	chr16	-	756	5	FSM	ENSG00000233024.7	ENST00000533010.6	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	176.241843782911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCATGACAAAATCAATGGA	NA	False	NA	NA	False	NA	NA	NA	18374979	18364269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18364372_18364534_18364635_18368257_18368387_18372577_18372855_18374831
WTC11_00033145	chr16	-	1013	6	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	17436	7361	0	825	internal_fragment	FALSE	canonical	3	42	junction_5	93.9501995740296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	18384504	18381881	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18382036_18382425_18382586_18382651_18382866_18382958_18383239_18383365_18383510_18384443
WTC11_00033146	chr16	-	644	4	FSM	ENSG00000254681.6	ENST00000545364.5	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	32.273139846559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCGTGGTGGTGCAG	NA	False	NA	NA	False	NA	NA	NA	18384504	18382706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18382866_18382958_18383239_18383365_18383510_18384443
WTC11_00033148	chr16	-	1601	6	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	-120	19594	-120	857	5prime_fragment	FALSE	canonical	3	52	junction_1	50.8110224262413	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCCCGCCATGCAG	NA	False	NA	NA	False	NA	NA	NA	18402060	18394114	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18394253_18394370_18395043_18395254_18395425_18395692_18395765_18395885_18395958_18401583
WTC11_00033149	chr16	-	727	5	FSM	ENSG00000254681.6	ENST00000544578.1	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	21.856063231973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAAGGCCTGCTTCAGCC	NA	False	NA	NA	False	NA	NA	NA	18401925	18394971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18395043_18395254_18395425_18395692_18395765_18395885_18395958_18401583
WTC11_00033150	chr16	-	1360	8	FSM	ENSG00000185164.15	ENST00000620440.4	1360	8	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_4	236.693808925526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	18433412	18417325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347
WTC11_00033151	chr16	-	1535	9	ISM	ENSG00000185164.15	ENST00000330537.10	4352	31	127446	1	-1353	0	3prime_fragment	FALSE	canonical	3	640	junction_4	226.500517383515	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	18434765	18417325	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347_18433476_18434653
WTC11_00033153	chr16	-	3786	31	FSM	ENSG00000185164.15	ENST00000543392.5	3765	31	0	-21	0	10	multi-exon	FALSE	canonical	2	7	junction_1	329.721437984652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTGGATGACATGCA	-18554135	True	NA	NA	False	AATAAA	-38	NA	18562074	18499914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18500109_18500439_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18551438_18551540_18554806_18554853_18557701_18557792_18561875
WTC11_00033154	chr16	-	4247	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	-12	0	10	multi-exon	FALSE	canonical	3	495	junction_20	235.724471929977	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTGGATGACATGCA	-18554158	True	NA	NA	False	AATAAA	-38	NA	18562097	18499914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
WTC11_00033155	chr16	-	3931	32	FSM	ENSG00000185164.15	ENST00000621364.4	3921	32	0	-10	0	10	multi-exon	FALSE	canonical	2	7	junction_1	288.792336338026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTGGATGACATGCA	-18554173	True	NA	NA	False	AATAAA	-38	NA	18562112	18499914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18500109_18500439_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
WTC11_00033157	chr16	-	530	7	NNC	ENSG00000134419.15	novel	589	6	NA	NA	0	121023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6344.62576823006	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTACCCTGCCAGTAC	-18727086	True	NA	NA	False	NA	NA	NA	18790334	18660271	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18660300_18749907_18749933_18782954_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790309
WTC11_00033158	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	5500.24128448016	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-18727086	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
WTC11_00033159	chr16	-	424	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	-6	0	0	multi-exon	FALSE	canonical	3	233	junction_2	5222.86168898069	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	-18727114	True	NA	-21	True	AATAAA	-26	NA	18790362	18782955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
WTC11_00033160	chr16	-	525	5	FSM	ENSG00000134419.15	ENST00000563390.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	6711	junction_4	3250.00025961537	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	-18727135	True	NA	-21	True	AATAAA	-26	NA	18790383	18782955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790309
WTC11_00033161	chr16	-	431	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	-4	0	-2	multi-exon	FALSE	canonical	2	134	junction_3	5658.42439973355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCACTTGGTCGTTT	-18727086	True	NA	-29	True	AATAAA	-18	NA	18790334	18782963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
WTC11_00033162	chr16	-	593	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	-4	0	-2	multi-exon	FALSE	canonical	3	49	junction_3	5943.75957118052	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCACTTGGTCGTTT	-18727114	True	NA	-29	True	AATAAA	-18	NA	18790362	18782963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
WTC11_00033163	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	6031.56039097678	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727012	True	NA	-34	True	AATAAA	-13	NA	18790260	18782968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
WTC11_00033165	chr16	-	2194	4	FSM	ENSG00000134419.15	ENST00000576436.5	2190	4	0	-4	0	-2	multi-exon	FALSE	canonical	3	49	junction_2	6656.39426917206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCACTTGGTCGTTT	-18725889	False	NA	-29	True	AATAAA	-18	NA	18789137	18782963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18784824_18786239_18786337_18788062_18788143_18788980
WTC11_00033168	chr16	-	2280	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	-2	0	2	multi-exon	FALSE	canonical	3	2796	junction_3	105.286276408656	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCACTTTCTTTATAAC	-18748510	True	NA	-4	True	AATAAA	-18	NA	18801549	18791666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
WTC11_00033172	chr16	-	16123	64	NIC	ENSG00000157106.18	novel	16062	63	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	9	junction_63	25.1995212854505	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTAAGTTCTGAATTT	-18920689	True	NA	-4	True	AATAAA	-21	NA	18926408	18804856	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986_18900045_18925949
WTC11_00033173	chr16	-	16070	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	-8	0	8	multi-exon	TRUE	canonical	1	16	junction_12	24.5350998332867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTGAATTTATTGG	-18920689	True	NA	1	True	AATAAA	-26	NA	18926408	18804851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
WTC11_00033174	chr16	-	2016	10	FSM	ENSG00000157106.18	ENST00000563448.1	2016	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	4.60541817245838	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAGAGTTCCTGAGAAA	-18850325	False	NA	NA	False	AATATA	-25	NA	18850361	18838460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236
WTC11_00033175	chr16	-	2372	13	FSM	ENSG00000157106.18	ENST00000565224.5	2372	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	43.5452351009844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	18900044	18875607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986
WTC11_00033176	chr16	-	1259	10	FSM	ENSG00000157106.18	ENST00000532700.6	1259	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	19.7415398351225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTTCTGGAAGACATG	-18920439	False	5719	NA	False	NA	NA	NA	18926158	18884104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986_18900045_18925949
WTC11_00033177	chr16	-	2913	6	FSM	ENSG00000006007.12	ENST00000353258.8	2907	6	0	-6	0	6	multi-exon	FALSE	canonical	3	206	junction_5	29.0750752363601	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAACTGCATGTACTTCC	-19515455	True	NA	NA	False	AATAAA	-34	NA	19522098	19501686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517190_19521703
WTC11_00033178	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	80.1947629212781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-19515480	True	NA	NA	False	NA	NA	NA	19522123	19502382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
WTC11_00033180	chr16	-	394	1	FSM	ENSG00000276571.1	ENST00000621246.1	394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCTGCTCTGCTATTG	NA	False	NA	-3	True	AATACA	-16	NA	19694428	19694034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19694000_19694400
WTC11_00033181	chr16	-	5597	6	NNC	ENSG00000103550.14	novel	6422	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	409.79341136724	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-19704746	True	NA	-7	True	AATAAA	-30	NA	19718227	19701936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_19702093_19702917_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
WTC11_00033182	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	105.411099984774	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-19704746	True	NA	-7	True	AATAAA	-30	NA	19718227	19701936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
WTC11_00033185	chr16	-	5152	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	-8	0	8	multi-exon	FALSE	canonical	3	956	junction_2	12.5698050899765	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGAAAAGATTCCATT	-19875698	True	NA	63	True	ATTAAA	-25	NA	19884848	19856682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
WTC11_00033186	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	-19862326	False	NA	-33	True	AATAAA	-19	NA	19862340	19858970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19860545_19861836
WTC11_00033190	chr16	-	4360	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	-3	0	3	multi-exon	FALSE	canonical	3	302	junction_3	31.4430702487315	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTAATATTTTTTCTT	-20734917	True	NA	-10	True	AATAAA	-19	NA	20741818	20733660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
WTC11_00033191	chr16	-	4097	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	19	6	19	-6	multi-exon	FALSE	canonical	3	104	junction_1	106.175267835782	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGGTGTTCTAATA	NA	False	NA	-19	True	AATAAA	-10	NA	20742065	20733669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
WTC11_00033192	chr16	-	1040	2	FSM	ENSG00000066654.14	ENST00000570231.1	1040	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTGTGACTAAAAACAG	-20731371	False	NA	NA	False	GGGGCT	-28	NA	20738272	20736811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20737287_20737707
WTC11_00033193	chr16	-	635	2	FSM	ENSG00000066654.14	ENST00000569768.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGAATGGGGTGGTGG	-20734914	True	NA	NA	False	NA	NA	NA	20741815	20738743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20739072_20741508
WTC11_00033194	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	21.8288799529431	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-20805499	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
WTC11_00033195	chr16	-	1304	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	30	1312	0	-282	multi-exon	FALSE	canonical	3	29	junction_1	26.6103245940368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATTTTATTTTTATTTT	-20805473	True	NA	NA	False	NA	NA	NA	20806446	20797655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
WTC11_00033196	chr16	-	773	9	NIC	ENSG00000196678.14	novel	2646	9	NA	NA	0	-812	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	33.6479939966709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGCTTTCCCACCAGC	-20805477	True	NA	NA	False	NA	NA	NA	20806450	20798185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803512_20803602_20803671_20806407
WTC11_00033197	chr16	-	2706	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	197	0	-3	0	multi-exon	FALSE	canonical	3	20	junction_9	24.7421268185694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	-20805506	True	NA	NA	False	NA	NA	NA	20806479	20797373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
WTC11_00033203	chr16	-	6160	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	-24	0	24	multi-exon	FALSE	canonical	3	52	junction_2	12.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTGACTTTATTCTG	-20897725	True	NA	18	True	AATAAA	-39	NA	20900358	20854900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20860370_20862107_20862644_20900203
WTC11_00033204	chr16	-	1247	8	FSM	ENSG00000103316.12	ENST00000572914.2	1244	8	0	-3	0	0	multi-exon	FALSE	canonical	3	162	junction_6	14.9829835452879	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCGGTAACTTCTAT	-21277092	True	NA	0	True	AATAAA	-22	NA	21278290	21258517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081
WTC11_00033205	chr16	-	1405	9	NIC	ENSG00000103316.12	novel	1482	10	NA	NA	180	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_8	58.9977488977334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTCGGTAACTTC	-21283902	False	NA	-3	True	AATAAA	-19	NA	21283924	21258520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081_21278337_21283809
WTC11_00033207	chr16	-	2106	1	Genic_Genomic	ENSG00000169246.16	novel	NA	NA	NA	NA	1077	100	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTATTGCTTTGTTTC	-21404226	False	NA	NA	False	AATAAA	-36	NA	21404242	21402136	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_21402100_21404200
WTC11_00033208	chr16	-	1254	7	FSM	ENSG00000169246.16	ENST00000504841.6	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	112.939511834138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCTCAGCGGATGATAA	NA	False	NA	NA	False	NA	NA	NA	21425278	21404861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21405294_21406653_21406690_21406798_21406860_21410933_21411130_21411241_21411342_21414956_21415086_21424978
WTC11_00033209	chr16	-	3434	3	ISM	ENSG00000169246.16	ENST00000419180.6	910	9	15151	96	-4852	-96	3prime_fragment	FALSE	canonical	3	339	junction_2	54.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTCTTCAGGATTGCCC	NA	False	NA	NA	False	NA	NA	NA	21410171	21405268	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21405294_21406653_21406690_21406798
WTC11_00033210	chr16	-	483	2	FSM	ENSG00000169246.16	ENST00000537983.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGATGTAATCAGCAGTG	NA	False	NA	NA	False	ATTAAA	-29	NA	21425381	21422706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21422787_21424978
WTC11_00033211	chr16	-	1117	8	Fusion	ENSG00000169246.16_ENSG00000180747.15	novel	3194	19	NA	NA	2699	-6393	multi-exon	FALSE	canonical	3	12	junction_1	25.6999960295399	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACGATCTACACTTAAT	-21454227	False	NA	NA	False	NA	NA	NA	21454240	21431447	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_21431568_21447117_21447198_21447927_21448088_21448461_21448610_21449588_21449699_21452581_21452784_21452931_21453075_21454086
WTC11_00033212	chr16	-	904	6	ISM	ENSG00000180747.15	ENST00000520823.6	3194	19	8500	8957	-1721	7565	internal_fragment	FALSE	canonical	3	49	junction_3	8.25590697622012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGTCACAGCTGGCAG	-21458647	False	NA	NA	False	NA	NA	NA	21458660	21455639	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21455873_21456259_21456460_21457010_21457152_21457770_21457873_21457961_21458050_21458520
WTC11_00033213	chr16	-	2159	12	NIC	ENSG00000180747.15	novel	4262	29	NA	NA	-224	-332	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	51.5806357412457	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTCTTTTTCCTTGA	-21501192	False	NA	NA	False	AATAAA	-35	NA	21502110	21463536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21463994_21464715_21464818_21467091_21467317_21469746_21469920_21471653_21471752_21472672_21472746_21473123_21473250_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21501776
WTC11_00033214	chr16	-	589	4	FSM	ENSG00000180747.15	ENST00000437413.2	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	11.3137084989848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATCTTCTTCAGAGGA	-21520168	False	3389	NA	False	NA	NA	NA	21520179	21479544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21479579_21484371_21484536_21487577_21487617_21519827
WTC11_00033215	chr16	-	536	1	FSM	ENSG00000258186.2	ENST00000553010.2	536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGAGTACGGGGCGCGGG	-21520354	False	NA	NA	False	NA	NA	NA	21520365	21519829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21519800_21520400
WTC11_00033216	chr16	-	1640	1	FSM	ENSG00000260306.1	ENST00000567370.1	1665	1	2	23	2	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATGCCCATTCAAAT	NA	False	NA	NA	False	AATATA	-9	NA	21795757	21794117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21794100_21795800
WTC11_00033217	chr16	-	2608	6	FSM	ENSG00000248124.9	ENST00000546471.5	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	6.87022561492707	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCATGTGGTGTATCA	NA	False	NA	NA	False	AATAAA	-16	NA	21807737	21796629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130
WTC11_00033218	chr16	-	3104	15	NNC	ENSG00000248124.9	novel	2131	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	53.0019733941433	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCATGTGGTGTATCA	-21818990	True	NA	NA	False	AATAAA	-16	NA	21820410	21796629	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130_21806230_21809645_21809716_21809836_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
WTC11_00033219	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	3	45	junction_2	45.0219900919177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21818990	True	NA	NA	False	AATAAA	-20	NA	21820410	21810426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
WTC11_00033220	chr16	-	1390	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	49.9824458981269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21819036	True	NA	NA	False	AATAAA	-20	NA	21820456	21810426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
WTC11_00033221	chr16	-	4034	8	FSM	ENSG00000185864.18	ENST00000682606.1	4020	8	0	-14	0	1	multi-exon	FALSE	canonical	3	79	junction_7	129.944886276405	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGCTTTGTTTCGAT	NA	False	NA	NA	False	AATAAA	-39	NA	21857756	21834567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21857258_21857417_21857579
WTC11_00033222	chr16	-	910	9	FSM	ENSG00000185864.18	ENST00000542133.5	910	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	151.31754690055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGATAACTCCCTG	NA	False	NA	NA	False	TTTAAA	-45	NA	21857602	21837623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21851769_21851856_21857258_21857417_21857579
WTC11_00033234	chr16	-	3590	1	Genic_Genomic	ENSG00000185864.18	novel	NA	NA	NA	NA	-2278	-7662	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTCAAGCGATTCTCC	-21868569	False	NA	NA	False	NA	NA	NA	21868586	21864996	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_21865000_21868600
WTC11_00033235	chr16	-	679	5	ISM	ENSG00000185710.9	ENST00000540706.5	2543	8	1450	2147	1450	-1165	internal_fragment	FALSE	canonical	3	28	junction_1	23.4240794909853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGTACCGAGCAATTA	-21887719	False	NA	NA	False	NA	NA	NA	21887730	21881919	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21881952_21884823_21885026_21885173_21885317_21886329_21886485_21887583
WTC11_00033236	chr16	-	1762	11	ISM	ENSG00000185710.9	ENST00000523028.5	4131	28	16918	8543	-9819	-2927	internal_fragment	FALSE	canonical	3	22	junction_3	45.403193720266	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGTCACAGCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	21899106	21887880	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21888114_21888500_21888701_21889251_21889393_21890011_21890114_21890202_21890291_21890763_21890883_21891591_21891748_21891901_21892033_21895522_21895793_21896514_21896617_21898886
WTC11_00033237	chr16	-	1230	2	ISM	ENSG00000185710.9	ENST00000523028.5	4131	28	18731	16004	-8006	6210	internal_fragment	FALSE	canonical	3	130	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTTTTCCTTG	NA	False	NA	NA	False	AATAAA	-34	NA	21897293	21895341	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21895793_21896514
WTC11_00033238	chr16	-	875	7	FSM	ENSG00000185710.9	ENST00000381448.8	868	7	1	-8	1	8	multi-exon	FALSE	canonical	3	39	junction_6	41.543818901118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTGCTTTTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	21911371	21901543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21901715_21903448_21903547_21904467_21904541_21904918_21905045_21908391_21908606_21909883_21909940_21911234
WTC11_00033239	chr16	-	664	2	FSM	ENSG00000261113.1	ENST00000568125.1	669	2	5	0	-1	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCTTAATAAAGTAGCTC	-22288721	False	NA	NA	False	NA	NA	NA	22288733	22286707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22287074_22288435
WTC11_00033240	chr16	-	2626	4	FSM	ENSG00000140743.8	ENST00000561630.1	711	4	-217	-1698	-35	0	multi-exon	FALSE	canonical	3	23	junction_3	92.9551863354954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	22374654	22345935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22374230
WTC11_00033241	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	9.98436277385793	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-22371292	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
WTC11_00033243	chr16	-	578	4	FSM	ENSG00000257122.5	ENST00000549207.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	37.1752605908822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTACTTTTAAACATTG	-22435791	False	NA	NA	False	NA	NA	NA	22435812	22429795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22429949_22432725_22432835_22434626_22434812_22435681
WTC11_00033244	chr16	-	10873	16	FSM	ENSG00000103404.15	ENST00000219689.12	10881	16	2	6	2	-6	multi-exon	FALSE	canonical	3	36	junction_15	7.98331593595878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGCCACATTTCTCCT	-23148378	True	NA	-9	True	AATAAA	-19	NA	23149450	23061411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23069617_23072044_23072198_23073721_23073881_23079945_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091_23087187_23087723_23087836_23090623_23090805_23102318_23102464_23105440_23105577_23106212_23106306_23106398_23106488_23108045_23108184_23148637
WTC11_00033245	chr16	-	10905	17	NNC	ENSG00000103404.15	novel	10881	16	NA	NA	0	-60	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	18.3182584802704	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAGTGGAAAATGT	-23148380	True	NA	-63	True	NA	NA	NA	23149452	23061465	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23069617_23072044_23072198_23073721_23073881_23079945_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091_23087187_23087723_23087836_23090623_23090805_23102318_23102464_23105440_23105577_23106212_23106306_23106398_23106488_23107330_23107415_23108045_23108184_23148637
WTC11_00033246	chr16	-	1558	5	FSM	ENSG00000103404.15	ENST00000563525.2	1560	5	0	2	0	-2	multi-exon	FALSE	canonical	3	57	junction_3	3.24037034920393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGTTCTTTTGTGAC	NA	False	NA	NA	False	TTTAAA	-12	NA	23087130	23078980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091
WTC11_00033247	chr16	-	2060	13	ISM	ENSG00000103404.15	ENST00000219689.12	10881	16	475	18363	475	-790	5prime_fragment	FALSE	canonical	3	36	junction_12	8.44713955529721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTCCTGAGTTGGGTC	-23147905	False	NA	-11	True	AATAAA	-14	NA	23148977	23079768	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091_23087187_23087723_23087836_23090623_23090805_23102318_23102464_23105440_23105577_23106212_23106306_23106398_23106488_23108045_23108184_23148637
WTC11_00033248	chr16	-	2940	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	-5	0	5	multi-exon	FALSE	canonical	3	83	junction_10	12.5597011807606	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTCCTTCTTCTTTTTT	-23451607	True	NA	4	True	AATAAA	-25	NA	23453189	23388487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
WTC11_00033249	chr16	-	741	2	FSM	ENSG00000168434.13	ENST00000563164.1	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGGGCGTGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	23393292	23391842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23392524_23393232
WTC11_00033250	chr16	-	7272	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	30	-1329	0	1329	multi-exon	FALSE	canonical	3	492	junction_14	29.7352247973679	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTTCTCTGTATT	-23499608	True	NA	NA	False	AATAAA	-24	NA	23510464	23462212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
WTC11_00033251	chr16	-	1755	2	FSM	ENSG00000103365.15	ENST00000568922.1	1807	2	52	0	52	0	multi-exon	FALSE	canonical	3	518	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGGAGTGTTGAGTA	-23469513	False	NA	-2	True	AATAAA	-18	NA	23469530	23466590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23467701_23468885
WTC11_00033252	chr16	-	1339	6	FSM	ENSG00000103365.15	ENST00000567201.5	576	6	-763	0	613	0	multi-exon	FALSE	canonical	3	492	junction_5	14.4443760682142	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGCAGGAGATGCTGA	-23495150	False	NA	NA	False	NA	NA	NA	23495165	23486084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302
WTC11_00033253	chr16	-	563	6	FSM	ENSG00000103365.15	ENST00000570111.5	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	187.816932144043	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATAAAATCTTACCCCCA	-23499608	True	NA	NA	False	TATAAA	-21	NA	23510464	23488679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495688_23495779_23510320
WTC11_00033254	chr16	-	1402	4	FSM	ENSG00000103365.15	ENST00000568799.1	1403	4	0	1	0	-1	multi-exon	FALSE	canonical	3	532	junction_1	4.78423336480244	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTGCCTTACTGTG	-23499638	True	NA	NA	False	AAGAAA	-5	NA	23510494	23491676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23491801_23493359_23494379_23495693_23495779_23510320
WTC11_00033255	chr16	-	553	5	FSM	ENSG00000103365.15	ENST00000563494.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	205.642894358157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAAGGTCTGACTTGCC	-23499636	True	NA	NA	False	NA	NA	NA	23510492	23491684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23491801_23493359_23493459_23494302_23494379_23495688_23495779_23510320
WTC11_00033258	chr16	-	388	4	FSM	ENSG00000103365.15	ENST00000562944.5	388	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	252.463858799631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACAGCGAGGTGGCCAA	-23499592	True	NA	NA	False	NA	NA	NA	23510448	23493422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23493522_23494302_23494379_23495693_23495779_23510320
WTC11_00033259	chr16	-	332	2	FSM	ENSG00000103365.15	ENST00000566651.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAGGGCAGCATTGA	NA	False	NA	NA	False	NA	NA	NA	23495778	23494111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23494379_23495713
WTC11_00033260	chr16	-	603	2	FSM	ENSG00000103365.15	ENST00000566547.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATTTTAAATACTGTT	-23499631	True	NA	NA	False	AAAACA	-28	NA	23510487	23495342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23495779_23510320
WTC11_00033261	chr16	-	5212	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	-16	0	16	multi-exon	TRUE	canonical	3	229	junction_6	10.2522863303753	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTGAAAGCAGCTCCAG	-23551447	True	NA	15	True	AATAAA	-36	NA	23557350	23520737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
WTC11_00033264	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	1925.93013603528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572468	True	NA	-25	True	AATAAA	-14	NA	23596277	23581013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
WTC11_00033265	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	4011	junction_2	148.150261559	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572507	True	NA	-25	True	AATAAA	-14	NA	23596316	23581013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
WTC11_00033267	chr16	-	4090	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	-61	-21	-61	16	multi-exon	TRUE	canonical	0	0	junction_1	35.8817502360183	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTCTTTCAAGATCA	-23638918	True	NA	16	True	AATAAA	-38	NA	23641371	23603143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
WTC11_00033268	chr16	-	1869	3	ISM	ENSG00000083093.10	ENST00000561514.1	815	4	1316	-248	1316	0	3prime_fragment	FALSE	canonical	3	112	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTGGGAAAAGACTAAAG	-23637082	False	NA	NA	False	NA	NA	NA	23639535	23636034	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_23636335_23637849_23637953_23638069
WTC11_00033270	chr16	-	518	1	FSM	ENSG00000279756.1	ENST00000623305.1	2251	1	873	860	873	-860	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCGAAGAACTCCCAAAG	NA	False	NA	NA	False	NA	NA	NA	23755066	23754548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23754500_23755100
WTC11_00033271	chr16	-	3535	22	NNC	ENSG00000140750.17	novel	3495	20	NA	NA	0	30605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.886005198986	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGCACGGTGGCTCAC	-25009933	True	NA	NA	False	NA	NA	NA	25015331	24888783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_24888813_24919388_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
WTC11_00033272	chr16	-	3492	21	NNC	ENSG00000140750.17	novel	3495	20	NA	NA	0	30605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.084578684669	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGCACGGTGGCTCAC	-25009939	True	NA	NA	False	NA	NA	NA	25015337	24888783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_24888813_24919388_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
WTC11_00033273	chr16	-	1616	1	FSM	ENSG00000140750.17	ENST00000573703.1	1616	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-24920994	False	NA	-19	True	ATTAAA	-25	NA	24921004	24919388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24919400_24921000
WTC11_00033275	chr16	-	3223	19	FSM	ENSG00000140750.17	ENST00000303665.9	3219	19	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_18	136.616250863505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-25009933	True	NA	-19	True	ATTAAA	-25	NA	25015331	24919388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
WTC11_00033276	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	119.884986434078	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-25009971	True	NA	-19	True	ATTAAA	-25	NA	25015369	24919388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
WTC11_00033277	chr16	-	1294	3	FSM	ENSG00000140750.17	ENST00000571843.1	1292	3	0	-2	0	0	multi-exon	FALSE	canonical	3	288	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	-24931137	False	NA	-23	True	ATTAAA	-21	NA	24931160	24919392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24927683_24927733_24930783
WTC11_00033278	chr16	-	2215	4	FSM	ENSG00000140750.17	ENST00000575283.5	2213	4	0	-2	0	0	multi-exon	FALSE	canonical	3	139	junction_1	111.239481400365	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-24939892	False	NA	-25	True	ATTAAA	-19	NA	24939921	24919394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363
WTC11_00033282	chr16	-	426	3	FSM	ENSG00000260448.7	ENST00000563962.6	1991	3	75	1490	-9	-1068	multi-exon	FALSE	canonical	2	3	junction_1	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTTTGGGAGGCCAA	-25111390	True	NA	NA	False	AGTAAA	-43	NA	25111464	25086657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25086724_25103350_25103642_25111395
WTC11_00033283	chr16	-	620	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	-11	-75	-11	75	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAACTTGACTGCTGCT	-25106937	True	NA	75	True	NA	NA	NA	25107113	25106493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25106500_25107100
WTC11_00033284	chr16	-	7505	7	FSM	ENSG00000155592.16	ENST00000328086.12	7437	7	-68	0	-68	0	multi-exon	FALSE	canonical	3	20	junction_3	6.28269227499025	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGGCGTCATTCTAT	-25257123	True	NA	-4	True	AATAAA	-39	NA	25257913	25236000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25240739_25243784_25244277_25246706_25247391_25251908_25252036_25252945_25253038_25255205_25255393_25256728
WTC11_00033285	chr16	-	1220	1	FSM	ENSG00000230330.1	ENST00000433603.1	273	1	-114	-833	-114	833	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCCTCCATCTTTCTGC	NA	False	NA	NA	False	AATAAA	-35	NA	26032925	26031705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_26031700_26032900
WTC11_00033286	chr16	-	209	1	FSM	ENSG00000259940.2	ENST00000567108.2	1686	1	1242	235	1242	-235	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCGACATTTGAGGTATT	NA	False	NA	NA	False	TTTAAA	-34	NA	27213751	27213542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27213500_27213800
WTC11_00033287	chr16	-	1044	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	-2	0	2	multi-exon	FALSE	canonical	3	178	junction_7	37.2766819930122	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTGTGTTCTCGAGCCC	-27267309	True	NA	-1	True	AATAAA	-24	NA	27268772	27224991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
WTC11_00033288	chr16	-	1222	9	NIC	ENSG00000169189.17	novel	1782	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	114.14621927598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-27267277	True	NA	-3	True	AATAAA	-22	NA	27268740	27224993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268162_27268375_27268705
WTC11_00033289	chr16	-	1244	10	NIC	ENSG00000169189.17	novel	1782	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	123.605205851454	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-27267288	True	NA	-3	True	AATAAA	-22	NA	27268751	27224993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27241352_27241485_27241798_27241890_27257434_27257582_27268705
WTC11_00033290	chr16	-	260	3	FSM	ENSG00000169189.17	ENST00000562039.1	260	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	112	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCAGCATTAGCCATC	-27233057	False	21	NA	False	AAAAAG	-10	NA	27233078	27225171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27225237_27226719_27226837_27233000
WTC11_00033291	chr16	-	428	1	FSM	ENSG00000274092.1	ENST00000617035.1	715	1	88	199	88	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCGCCGGGGCAGTTGC	NA	False	NA	NA	False	NA	NA	NA	27314013	27313585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27313600_27314000
WTC11_00033292	chr16	-	7016	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	-1	0	1	multi-exon	TRUE	canonical	2	368	junction_24	71.1652788484683	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTGTGTTTCCTA	-27534587	True	NA	1	True	ATTAAA	-17	NA	27549913	27460611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
WTC11_00033293	chr16	-	7091	37	FSM	ENSG00000077235.18	ENST00000356183.9	7090	37	0	-1	0	1	multi-exon	FALSE	canonical	2	235	junction_3	89.2217725185844	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTGTGTTTCCTA	-27534587	True	NA	1	True	ATTAAA	-17	NA	27549913	27460611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464319_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
WTC11_00033297	chr16	-	4519	25	NNC	ENSG00000169180.12	novel	4537	24	NA	NA	0	5449	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.455370575128	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCAGGTTTTTAATTTT	-28206509	True	NA	NA	False	AAAAAG	-1	NA	28211920	28092526	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28092554_28097975_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
WTC11_00033299	chr16	-	4366	23	NIC	ENSG00000169180.12	novel	4255	25	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_21	104.177465005039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	-28206499	True	NA	-3	True	AATAAA	-22	NA	28211910	28097978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28180940_28181032_28211365
WTC11_00033300	chr16	-	4541	24	FSM	ENSG00000169180.12	ENST00000304658.10	4537	24	0	-4	0	4	multi-exon	FALSE	canonical	3	146	junction_21	93.1873329214504	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGGAGCTGCTTGCTA	-28206554	True	NA	4	True	AATAAA	-29	NA	28211965	28097971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
WTC11_00033301	chr16	-	4334	17	ISM	ENSG00000169180.12	ENST00000565698.5	4255	25	57271	0	-1070	0	3prime_fragment	FALSE	canonical	3	293	junction_8	36.0598460895218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	-28154268	False	NA	-3	True	AATAAA	-22	NA	28154279	28097978	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658
WTC11_00033308	chr16	-	1221	3	NNC	ENSG00000246465.1	novel	2481	2	NA	NA	9	-496	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCACCATGCTGGCCAA	-28291847	True	NA	NA	False	NA	NA	NA	28292055	28285380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28285739_28286346_28287068_28291913
WTC11_00033309	chr16	-	2971	23	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	71128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	875.872717082183	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGCATGGTGGCTCAC	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28308450	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28308485_28376511_28376535_28379713_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00033310	chr16	-	2948	22	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	71129	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	704.836115783931	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGCATGGTGGCTCACA	-28403679	True	NA	NA	False	AAAAAG	-1	NA	28403841	28308449	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28308486_28379715_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00033311	chr16	-	2969	23	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	71128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	875.872717082183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGCATGGTGGCTCAC	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28308450	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28308485_28376511_28376536_28379716_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00033312	chr16	-	3047	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	-134	0	-2	multi-exon	FALSE	canonical	3	2016	junction_13	408.871018782207	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCTGCTTTTTGACA	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28379580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00033313	chr16	-	3051	21	FSM	ENSG00000205609.13	ENST00000398944.7	3053	21	0	2	0	-2	multi-exon	FALSE	canonical	3	90	junction_20	702.589488962082	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCTGCTTTTTGACA	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28379580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403782
WTC11_00033315	chr16	-	3534	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	114	-1928	0	44	multi-exon	FALSE	canonical	3	39	junction_13	47.7914602061817	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATATGACTCCTGCCTCT	-28491872	False	NA	NA	False	AATAAA	-20	NA	28491891	28475351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
WTC11_00033316	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_13	30.53143244833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-28490849	True	NA	0	True	AATAAA	-27	NA	28492074	28477271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
WTC11_00033317	chr16	-	1565	13	NIC	ENSG00000188603.22	novel	1841	15	NA	NA	7	0	intron_retention	FALSE	canonical	2	8	junction_11	56.3192166730563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490714	True	NA	-7	True	AATAAA	-20	NA	28491939	28477278	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28491481_28491561_28491713
WTC11_00033318	chr16	-	1584	13	NIC	ENSG00000188603.22	novel	1841	15	NA	NA	5	0	intron_retention	FALSE	canonical	1	3	junction_10	59.0919128702623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490716	True	NA	-7	True	AATAAA	-20	NA	28491941	28477278	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28489289_28489387_28491481_28491561_28491713
WTC11_00033323	chr16	-	454	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	-32	10	-32	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGCGAACAGATTGC	-28553973	True	NA	-9	True	AATAAA	-18	NA	28554172	28553718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28553700_28554200
WTC11_00033324	chr16	-	1578	7	FSM	ENSG00000196502.13	ENST00000569554.5	1578	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	14.1823442663365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCGGGC	-28608674	False	NA	NA	False	ACTAAA	-11	NA	28608920	28605195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707
WTC11_00033325	chr16	-	1162	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	37	370	-17	0	multi-exon	FALSE	canonical	3	16	junction_2	13.2541868625637	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	-28609761	True	NA	-24	True	NA	NA	NA	28610007	28605627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
WTC11_00033326	chr16	-	2288	3	NNC	ENSG00000261419.1	novel	361	3	NA	NA	53	-76738	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_2	32	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGAGCTGAGCTCGC	-28740703	False	25	NA	False	NA	NA	NA	28740728	28736433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28737787_28737836_28738722_28740678
WTC11_00033328	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_5	125.839403827083	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	-28813612	True	NA	-11	True	AATAAA	-16	NA	28846348	28842410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
WTC11_00033329	chr16	-	814	3	FSM	ENSG00000178952.11	ENST00000569217.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	1888	junction_1	60	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGGCCTGCCTGGCTG	-28811596	False	126	-54	True	NA	NA	NA	28844332	28842837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28843149_28843735_28843856_28843949
WTC11_00033330	chr16	-	966	7	FSM	ENSG00000178952.11	ENST00000565012.1	966	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	638.27971924541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGGGCTCCAGGTGAC	-28813594	True	NA	NA	False	NA	NA	NA	28846330	28843951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845911_28846107_28846217
WTC11_00033331	chr16	-	416	3	NNC	ENSG00000260442.6	novel	437	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_2	7.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878185	True	NA	-7	True	ATTAAA	-19	NA	28879920	28878956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28879105_28879541_28879756_28879866
WTC11_00033332	chr16	-	502	2	NNC	ENSG00000260442.6	novel	558	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878160	True	NA	-7	True	ATTAAA	-19	NA	28879895	28878956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28879105_28879541
WTC11_00033334	chr16	-	539	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	-9	16	9	multi-exon	FALSE	canonical	3	50	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTCTCAGTATCTTC	-28878185	True	NA	2	True	ATTAAA	-28	NA	28879920	28878947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28879108_28879541
WTC11_00033335	chr16	-	2265	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	528	1	0	-1	3prime_fragment	TRUE	canonical	3	66	junction_4	10.4050210384178	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGGTCGCCTTGTCCCTG	-28924062	True	NA	-7	True	AATAAA	-16	NA	28924710	28904421	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
WTC11_00033336	chr16	-	2752	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	-446	1	0	-1	multi-exon	FALSE	canonical	3	66	junction_4	10.8892786211433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGGTCGCCTTGTCCCTG	-28925460	True	NA	-7	True	AATAAA	-16	NA	28925684	28904421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
WTC11_00033343	chr16	-	410	4	NNC	ENSG00000183336.9	novel	399	3	NA	NA	6	97343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1271.14760048636	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAAAGTGAAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	29454337	29356246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_29356272_29453592_29453733_29454015_29454114_29454190
WTC11_00033344	chr16	-	2824	1	Genic_Genomic	ENSG00000254206.5	novel	NA	NA	NA	NA	13574	55	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTATTGCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-36	NA	29384122	29381298	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_29381300_29384100
WTC11_00033346	chr16	-	1239	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	-302	0	302	multi-exon	FALSE	canonical	3	253	junction_3	1062.21066648759	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGAATACTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	29454347	29442927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
WTC11_00033347	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	1069.69537135579	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
WTC11_00033348	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2524	junction_1	158.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29453733_29454015_29454114_29454190
WTC11_00033349	chr16	-	3503	3	ISM	ENSG00000169203.17	ENST00000552123.1	464	5	934	25	934	-25	intron_retention	FALSE	canonical	3	526	junction_2	13	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATGGGCCACCAGC	NA	False	NA	NA	False	TTTAAA	-1	NA	29490728	29485756	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_29485834_29487193_29487230_29487338
WTC11_00033351	chr16	-	611	3	FSM	ENSG00000169203.17	ENST00000548346.1	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	71	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATGTGGAAACAAAAGTT	NA	False	NA	NA	False	AATAAA	-32	NA	29495899	29491572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29491663_29491774_29491875_29495478
WTC11_00033352	chr16	-	675	5	FSM	ENSG00000169203.17	ENST00000550690.1	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	176.742750912166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGATGTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	29505999	29491824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29491875_29495478_29495608_29500142_29500275_29505472_29505631_29505793
WTC11_00033353	chr16	-	2611	13	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-83	-17420	multi-exon	TRUE	canonical	3	32	junction_12	158.152067292492	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGATAAGTTTTTTTAT	-29612490	True	NA	NA	False	NA	NA	NA	29613723	29544987	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29613102
WTC11_00033354	chr16	-	2502	14	Fusion	ENSG00000205534.6_ENSG00000279583.1	novel	4221	29	NA	NA	-397	-17443	multi-exon	FALSE	canonical	2	3	junction_13	158.593111918295	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	-29594753	True	NA	NA	False	AATAAA	-35	NA	29595363	29545010	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29594886
WTC11_00033355	chr16	-	1273	1	FSM	ENSG00000279583.1	ENST00000623486.1	1008	1	-22	-243	-22	243	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGACCGGCCCGGGAC	NA	False	NA	NA	False	NA	NA	NA	29596159	29594886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29594900_29596200
WTC11_00033356	chr16	-	538	1	FSM	ENSG00000260727.2	ENST00000568957.2	538	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACGGGGCGCGGGCC	-29612407	False	1233	NA	False	NA	NA	NA	29613640	29613102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29613100_29613600
WTC11_00033357	chr16	-	354	1	FSM	ENSG00000222375.1	ENST00000410443.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGATAGTGATTGAAAA	NA	False	NA	NA	False	TATAAA	-31	NA	29731404	29731050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29731000_29731400
WTC11_00033358	chr16	-	6265	1	Genic_Genomic	ENSG00000185905.4	novel	NA	NA	NA	NA	2721	5458	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTACCTCCATGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	29743269	29737004	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_29737000_29743300
WTC11_00033359	chr16	-	2519	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	22	-698	0	698	multi-exon	FALSE	canonical	3	414	junction_5	32.124756808418	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAAATTAGCCAA	-29857577	True	NA	NA	False	NA	NA	NA	29863204	29857658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
WTC11_00033361	chr16	-	1681	5	FSM	ENSG00000103502.14	ENST00000566113.5	1671	5	0	-10	0	0	multi-exon	FALSE	canonical	3	18	junction_4	205.74255758107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTGGTTTCTCAGAG	-29857577	True	NA	-16	True	AATAAA	-13	NA	29863204	29858361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862814
WTC11_00033362	chr16	-	2679	6	FSM	ENSG00000103502.14	ENST00000564296.5	1015	6	-173	-1491	-35	698	multi-exon	FALSE	canonical	3	28	junction_5	185.59137911013	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAAATTAGCCAA	-29863434	False	NA	NA	False	NA	NA	NA	29863449	29857658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862636_29862814
WTC11_00033363	chr16	-	1129	4	FSM	ENSG00000103502.14	ENST00000562041.1	1129	4	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_3	7.71722460186015	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGGGACCTTTAGGT	-29863399	False	NA	NA	False	NA	NA	NA	29863414	29859459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859524_29860580_29860663_29861105_29861260_29862585
WTC11_00033364	chr16	-	3019	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	-4	0	4	multi-exon	FALSE	canonical	3	23	junction_13	87.154422339508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGTGTGGGGAGG	-29897534	False	1530	-7	True	AATAAA	-25	NA	29899064	29871154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
WTC11_00033365	chr16	-	3173	18	FSM	ENSG00000174938.15	ENST00000350527.7	3173	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_16	85.9293586108978	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	-29897560	False	NA	-11	True	AATAAA	-21	NA	29899090	29871158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29896912_29897852_29897985_29898940
WTC11_00033366	chr16	-	3847	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	-4	0	4	multi-exon	FALSE	canonical	3	190	junction_12	63.5101822749326	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGTGTGGGGAGG	NA	False	NA	-7	True	AATAAA	-25	NA	29899550	29871154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
WTC11_00033367	chr16	-	3805	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	-4	0	4	multi-exon	FALSE	canonical	3	78	junction_3	78.3250438876353	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGTGTGGGGAGG	NA	False	NA	-7	True	AATAAA	-25	NA	29899547	29871154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
WTC11_00033368	chr16	-	909	6	FSM	ENSG00000174938.15	ENST00000563118.1	909	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	93.4164867675937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAAGAGTGAGCCGGCC	-29888557	False	NA	NA	False	NA	NA	NA	29888593	29876764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29876951_29877270_29877468_29878286_29878426_29885585_29885750_29887648_29887818_29888539
WTC11_00033369	chr16	-	615	5	FSM	ENSG00000174943.11	ENST00000568995.1	601	5	0	-14	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.49924698112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	-29921499	False	NA	-5	True	AATAAA	-15	NA	29923237	29906338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29906567_29910977_29911174_29911814_29911868_29911959_29912050_29923189
WTC11_00033370	chr16	-	1714	6	FSM	ENSG00000174943.11	ENST00000568000.6	1716	6	21	-19	0	19	multi-exon	FALSE	canonical	3	73	junction_1	15.6588633048507	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGACGGGGAGATGCCT	-29924467	True	NA	14	True	AATAAA	-34	NA	29926205	29906319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29907109_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
WTC11_00033372	chr16	-	431	1	FSM	ENSG00000279789.1	ENST00000623731.1	2194	1	1596	167	1596	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCAGCCTATCTTAATA	NA	False	NA	NA	False	NA	NA	NA	29913741	29913310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29913300_29913700
WTC11_00033373	chr16	-	2878	3	FSM	ENSG00000174943.11	ENST00000567795.3	2878	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTACATGTCAATAAATT	-29924467	True	NA	NA	False	NA	NA	NA	29926205	29919669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29921962_29923189_29923360_29925789
WTC11_00033375	chr16	-	2569	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	-9	0	9	multi-exon	FALSE	canonical	3	142	junction_4	20.5216687647201	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGCCACTGAGCAGT	-29994640	True	NA	1	True	AATAAA	-29	NA	29995617	29992320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
WTC11_00033376	chr16	-	1699	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	-711	0	-280	0	multi-exon	FALSE	canonical	3	59	junction_3	53.4131070056779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	NA	False	NA	-4	True	AATAAA	-27	NA	29996354	29992989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
WTC11_00033377	chr16	-	1692	6	FSM	ENSG00000149929.16	ENST00000563053.1	1686	6	0	-6	0	0	multi-exon	FALSE	canonical	1	6	junction_3	70.0017142647235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-29995345	True	NA	-4	True	AATAAA	-27	NA	29996074	29992989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29994647_29994844_29995102_29995218_29995342
WTC11_00033378	chr16	-	640	2	FSM	ENSG00000149929.16	ENST00000568880.2	738	2	0	98	0	-98	multi-exon	FALSE	canonical	3	205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGGGCCGGAGCCTGGG	-29996022	False	NA	NA	False	NA	NA	NA	29996057	29995340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29995464_29995540
WTC11_00033380	chr16	-	1782	12	FSM	ENSG00000149927.18	ENST00000564944.5	1782	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	17.8936250710083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACCCAGAGCCACTC	-30011209	False	212	NA	False	AAAAAG	-7	NA	30011421	30005798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898_30010990_30011329
WTC11_00033382	chr16	-	2318	5	FSM	ENSG00000149926.14	ENST00000380495.9	2325	5	12	-5	12	5	multi-exon	FALSE	canonical	3	63	junction_4	8.44097150806707	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGCCACCAAGTTCTT	-30031149	False	NA	0	True	AATAAA	-27	NA	30031259	30024421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30025468_30025725_30025822_30026608_30026844_30029431_30029516_30030402
WTC11_00033384	chr16	-	1802	10	NNC	ENSG00000102882.12	novel	1787	9	NA	NA	0	52556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.3740914435867	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGGAGGCATAGACAG	-30121001	True	NA	NA	False	NA	NA	NA	30123209	30061548	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30061578_30114107_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
WTC11_00033386	chr16	-	1843	9	FSM	ENSG00000149922.12	ENST00000395224.7	1843	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	6.19349457091875	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTCCTGTGTTTGG	-30091632	False	2678	2	True	AATAAA	-28	NA	30091924	30085792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075_30091242_30091872
WTC11_00033388	chr16	-	1601	4	FSM	ENSG00000090238.12	ENST00000398841.6	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	25.2498624858742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGCTCGCGTGTAATC	-30093535	True	NA	-16	True	AATAAA	-18	NA	30096213	30092313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251
WTC11_00033389	chr16	-	948	6	NIC	ENSG00000090238.12	novel	371	5	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	138.370517090889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCAGGCTCGCGTGTAA	-30093554	True	NA	-18	True	AATAAA	-16	NA	30096232	30092315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30092800_30094384_30094476_30094788_30094898_30095102_30095147_30095251_30095336_30096096
WTC11_00033390	chr16	-	935	5	FSM	ENSG00000090238.12	ENST00000398838.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	63.7666644885868	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	-30093566	True	NA	-51	True	NA	NA	NA	30096244	30092348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096096
WTC11_00033391	chr16	-	844	5	FSM	ENSG00000090238.12	ENST00000568674.1	371	5	-44	-429	-8	0	multi-exon	FALSE	canonical	3	84	junction_4	99.9924997187289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	-30093574	True	NA	-51	True	NA	NA	NA	30096252	30092348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095336_30096096
WTC11_00033394	chr16	-	1904	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	-50	-67	24	67	multi-exon	FALSE	canonical	3	259	junction_4	24.8768843507381	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTCAGGGGCCTGGT	-30123252	False	NA	66	True	NA	NA	NA	30123270	30114037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
WTC11_00033395	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	25.8093480928828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-30122950	False	2208	-2	True	TATAAA	-23	NA	30122968	30114105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
WTC11_00033396	chr16	-	1705	8	FSM	ENSG00000102882.12	ENST00000322266.9	1743	8	39	-1	24	0	multi-exon	FALSE	canonical	3	24	junction_3	97.3795435920917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-30123252	False	NA	-1	True	TATAAA	-24	NA	30123270	30114104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
WTC11_00033398	chr16	-	415	4	NNC	ENSG00000169627.9	novel	375	3	NA	NA	0	56551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1234.70023352499	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	-30193217	True	NA	NA	False	NA	NA	NA	30193666	30136380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30136421_30192931_30193075_30193357_30193456_30193532
WTC11_00033399	chr16	-	409	4	NNC	ENSG00000169627.9	novel	375	3	NA	NA	0	56551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1234.70023352499	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	-30193217	True	NA	NA	False	NA	NA	NA	30193666	30136380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30136418_30192934_30193075_30193357_30193456_30193532
WTC11_00033400	chr16	-	417	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	-31	-51	0	49	multi-exon	FALSE	canonical	3	123	junction_2	1200.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCCTCTCCCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	30193697	30192882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30193075_30193357_30193418_30193532
WTC11_00033404	chr16	-	6496	3	ISM	ENSG00000198064.14	ENST00000562937.5	797	7	4615	-2666	4615	0	intron_retention	FALSE	canonical	3	504	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	NA	False	NA	NA	False	AATAAA	-33	NA	30230901	30222936	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_30225804_30227163_30227200_30227308
WTC11_00033405	chr16	-	4800	8	FSM	ENSG00000198064.14	ENST00000520915.5	3584	8	-1153	-63	-1077	63	multi-exon	FALSE	canonical	3	50	junction_7	164.31800924812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTTTCGATATCTG	NA	False	NA	NA	False	AATAAA	-44	NA	30246954	30222873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30225804_30227163_30227200_30227308_30227370_30231439_30231636_30231747_30231848_30235450_30235580_30245453_30245612_30245764
WTC11_00033407	chr16	-	2338	13	NNC	ENSG00000183604.15	novel	2374	13	NA	NA	247	265	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_12	158.263756642722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAATATTCCTTATCT	-30334044	False	763	NA	False	NA	NA	NA	30334807	30284752	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334701
WTC11_00033408	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_6	25.5864547498606	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-30350355	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
WTC11_00033410	chr16	-	541	3	FSM	ENSG00000169217.9	ENST00000564525.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_2	14	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAACTACTTCCTGAAC	-30350338	True	NA	NA	False	NA	NA	NA	30355291	30353965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30354323_30354603_30354708_30355211
WTC11_00033411	chr16	-	2171	2	FSM	ENSG00000169221.14	ENST00000475650.1	2484	2	313	0	313	0	multi-exon	FALSE	canonical	3	178	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	NA	False	NA	-6	True	NA	NA	NA	30359361	30357101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662
WTC11_00033412	chr16	-	3781	7	FSM	ENSG00000169221.14	ENST00000478158.5	4614	7	838	-5	838	0	multi-exon	FALSE	canonical	2	6	junction_5	55.5747744534834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	-30367087	False	NA	-6	True	NA	NA	NA	30367169	30357101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30365104_30365213_30365494
WTC11_00033413	chr16	-	3581	9	FSM	ENSG00000169221.14	ENST00000409939.8	3580	9	0	-1	0	1	multi-exon	FALSE	canonical	3	126	junction_3	17.726657186283	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTCTGCCTTGTTAT	-30370454	False	NA	-5	True	NA	NA	NA	30370494	30357100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
WTC11_00033415	chr16	-	378	3	FSM	ENSG00000169221.14	ENST00000475872.5	558	3	180	0	47	0	multi-exon	FALSE	canonical	2	11	junction_1	70.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCTGGGCTCAGTGGAG	NA	False	NA	NA	False	NA	NA	NA	30359996	30358775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358818_30359537_30359604_30359726
WTC11_00033417	chr16	-	702	4	ISM	ENSG00000180096.13	ENST00000573615.5	1616	9	2870	-42	2870	-5	3prime_fragment	FALSE	canonical	1	2	junction_3	16.3095064303001	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCACGCGAGCCTTCTC	-30379460	False	NA	-7	True	AATAAA	-14	NA	30379500	30378141	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_30378521_30378609_30378701_30379017_30379184_30379434
WTC11_00033419	chr16	-	2282	2	Genic_Genomic	ENSG00000179918.19	novel	2244	1	NA	NA	0	53816	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCCAAATGACTAAATAAT	-30439992	True	NA	NA	False	NA	NA	NA	30445874	30389814	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_30389853_30443630
WTC11_00033420	chr16	-	1136	4	NNC	ENSG00000179958.10	novel	1181	3	NA	NA	0	8678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	515.14550263871	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGGCTCACGCCTGTAA	-30419499	True	NA	NA	False	AAAAAG	-10	NA	30430030	30414936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30414976_30423698_30424534_30429056_30429168_30429879
WTC11_00033421	chr16	-	1137	4	NNC	ENSG00000179958.10	novel	1181	3	NA	NA	0	8678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	515.14550263871	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGGCTCACGCCTGTAA	-30419499	True	NA	NA	False	AAAAAG	-10	NA	30430030	30414936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30414976_30423697_30424534_30429056_30429168_30429879
WTC11_00033422	chr16	-	1182	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1078	junction_2	14.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTATTACCTGTTTT	-30419499	True	NA	69	True	AGTAAA	-23	NA	30430030	30423613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30424534_30429056_30429168_30429879
WTC11_00033424	chr16	-	2308	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	-64	0	64	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTGGTATAGCAGAGA	-30439992	True	NA	56	True	TATAAA	-19	NA	30445874	30443566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30443600_30445900
WTC11_00033425	chr16	-	2558	3	NNC	ENSG00000169957.10	novel	2289	2	NA	NA	12	44355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAGAACTAGAGAGA	-30526775	False	NA	NA	False	NA	NA	NA	30526809	30479648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30479675_30524003_30526052_30526325
WTC11_00033428	chr16	-	3936	2	FSM	ENSG00000169955.8	ENST00000252799.3	3936	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTGAGAGCTTTGA	NA	False	NA	-1	True	ATTAAA	-21	NA	30535347	30530366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30533152_30534196
WTC11_00033429	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	-30534970	False	NA	NA	False	NA	NA	NA	30535004	30532305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30533149_30534196_30534311_30534450
WTC11_00033431	chr16	-	1434	2	FSM	ENSG00000229809.9	ENST00000563665.3	1414	2	0	-20	0	6	multi-exon	FALSE	canonical	3	30	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTGGACTCATTTCAAA	-30571356	True	NA	58	True	AAAAAG	-11	NA	30571672	30569665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30570437_30571009
WTC11_00033432	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	-30571398	True	NA	-2	True	AATAGA	-17	NA	30571714	30569725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30570437_30571009_30571124_30571433
WTC11_00033433	chr16	-	427	3	FSM	ENSG00000229809.9	ENST00000566632.5	427	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGCCAGCGGCGCC	-30571278	False	NA	NA	False	NA	NA	NA	30571320	30570219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30570437_30571009_30571124_30571224
WTC11_00033434	chr16	-	3003	3	FSM	ENSG00000197162.10	ENST00000395216.3	3208	3	0	205	0	-205	multi-exon	FALSE	canonical	3	18	junction_2	7	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATAGTCTTTCCAGTC	-30585024	True	NA	NA	False	AATAAA	-25	NA	30585697	30580860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30583444_30585121_30585251_30585406
WTC11_00033435	chr16	-	3564	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	1	-8	1	8	multi-exon	FALSE	canonical	3	70	junction_2	0.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATTACTTTTTAC	-30609488	True	NA	NA	False	ATTAAA	-25	NA	30610388	30602549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30605448_30609524_30609639_30609836
WTC11_00033436	chr16	-	307	2	FSM	ENSG00000261840.4	ENST00000564775.3	348	2	41	0	41	0	multi-exon	FALSE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGCCTTGATTATT	-30698950	False	NA	-3	True	AATAAA	-24	NA	30698961	30697705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30697932_30698880
WTC11_00033437	chr16	-	1055	3	FSM	ENSG00000196118.12	ENST00000545809.1	1055	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTGGTGAGAGGGGG	-30761872	True	NA	NA	False	NA	NA	NA	30762085	30760292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30760669_30761197_30761336_30761544
WTC11_00033438	chr16	-	2576	1	FSM	ENSG00000280211.1	ENST00000623557.1	2502	1	-46	-28	-46	28	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCAGAGACCCTGCCGT	-30776063	False	NA	NA	False	NA	NA	NA	30776079	30773503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30773500_30776100
WTC11_00033439	chr16	-	6075	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	8	0	8	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-30785411	True	NA	-6	True	AATAAA	-15	NA	30787197	30778455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30784255_30784409_30784516_30787027
WTC11_00033440	chr16	-	2113	6	FSM	ENSG00000099385.12	ENST00000572628.5	1603	6	-247	-263	11	263	multi-exon	FALSE	canonical	3	9	junction_1	188.813135136303	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTATAGTGATTTAAAAT	-30893994	True	NA	NA	False	AATAAA	-15	NA	30894189	30850982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30852323_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
WTC11_00033441	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	35.6673520183374	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-30891670	True	NA	0	True	AATAAA	-14	NA	30894077	30887794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
WTC11_00033443	chr16	-	3641	1	FSM	ENSG00000279196.1	ENST00000624286.1	3641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCGTCGGGTTTGCGCT	-30988255	False	NA	-19	True	AATAAA	-22	NA	30988270	30984629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30984600_30988300
WTC11_00033444	chr16	-	4676	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	-2	0	2	multi-exon	FALSE	canonical	3	12	junction_5	1.64053589558149	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTGCTCACTTCCTT	-31009933	True	NA	-12	True	NA	NA	NA	31010638	30989253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
WTC11_00033445	chr16	-	830	4	NNC	ENSG00000167397.15	novel	840	3	NA	NA	0	33690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	442.911829700776	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATCAAACACCAAAGTAC	-31085801	True	NA	NA	False	AAAAAG	-1	NA	31094760	31057151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_31057179_31090853_31091343_31093311_31093422_31094556
WTC11_00033446	chr16	-	2822	3	FSM	ENSG00000167394.13	ENST00000538906.5	2865	3	44	-1	44	0	multi-exon	FALSE	canonical	3	6	junction_2	39	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-31073430	False	NA	-4	True	ATTAAA	-19	NA	31073458	31060846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31062281_31063812_31064482_31072739
WTC11_00033447	chr16	-	2690	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	-5	0	1	multi-exon	FALSE	canonical	3	84	junction_1	2.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTGTTCTGGTTGGG	-31074212	False	NA	1	True	ATTAAA	-24	NA	31074240	31060841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31062281_31063812_31064482_31073658
WTC11_00033448	chr16	-	2352	2	FSM	ENSG00000151006.7	ENST00000486499.1	5489	2	3137	0	2237	0	multi-exon	FALSE	canonical	3	16	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAGAAAATAAGTTACAA	-31086479	False	NA	-18	True	AATAAA	-16	NA	31086491	31083436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31085261_31085963
WTC11_00033450	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094944	False	NA	-5	True	AATAAA	-30	NA	31094956	31090841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31094556
WTC11_00033451	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	40	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-31085838	True	NA	-17	True	AATAAA	-18	NA	31094797	31090853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31093311_31093422_31094556
WTC11_00033456	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197156	True	NA	-4	True	AATATA	-18	NA	31202756	31201485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31201842_31202416
WTC11_00033457	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	11	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197160	True	NA	-4	True	AATATA	-18	NA	31202760	31201485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31201842_31202146_31202204_31202416
WTC11_00033459	chr16	-	2786	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	-1	0	1	multi-exon	FALSE	canonical	3	142	junction_4	21.5192097645078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTGCAGCTGGACCCC	-31506891	True	NA	-10	True	AATAAA	-32	NA	31508391	31489473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
WTC11_00033460	chr16	-	764	3	FSM	ENSG00000140688.17	ENST00000567673.5	766	3	2	0	2	0	multi-exon	FALSE	canonical	3	152	junction_1	7.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGTAATGGCTGAGGGA	NA	False	NA	NA	False	AAGAAA	-17	NA	31496950	31493196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31493788_31493865_31493937_31496848
WTC11_00033461	chr16	-	645	5	FSM	ENSG00000140688.17	ENST00000541442.5	1056	5	0	411	0	33	multi-exon	FALSE	canonical	3	7	junction_2	72.9143332959988	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCGGAAGCAGGGTGG	-31506884	True	NA	NA	False	NA	NA	NA	31508384	31493865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31493937_31496848_31496951_31500685_31500732_31507763_31507879_31508073
WTC11_00033463	chr16	-	2862	1	FSM	ENSG00000279800.2	ENST00000624956.2	2609	1	-164	-89	-164	89	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACTTAAATTTTACTG	NA	False	NA	NA	False	NA	NA	NA	34268813	34265951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_34266000_34268800
WTC11_00033465	chr16	-	5192	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	-15	0	15	multi-exon	TRUE	canonical	3	106	junction_8	12.690766547201	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTCTGAGAATTGCTAT	-46619689	True	NA	87	True	AATATA	-32	NA	46621379	46578575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
WTC11_00033466	chr16	-	1222	3	FSM	ENSG00000171241.9	ENST00000567698.1	535	3	-26	-661	-26	661	multi-exon	FALSE	canonical	3	139	junction_1	0.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGAATTTATCTGCCTA	NA	False	NA	-43	True	AATAAA	-11	NA	46584279	46581251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46582055_46583515_46583658_46584002
WTC11_00033467	chr16	-	550	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	-20	0	20	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGGAATCTAAAAAAGAG	-46619661	True	NA	NA	False	AATAAA	-21	NA	46621351	46620445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46620901_46621256
WTC11_00033470	chr16	-	990	1	FSM	ENSG00000259856.1	ENST00000561790.1	589	1	45	-446	45	446	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAACCCACAGACTTGG	-46626923	False	NA	NA	False	GGGGCT	-26	NA	46626947	46625957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46626000_46626900
WTC11_00033471	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	454	junction_16	52.882978121509	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	-46679633	True	NA	NA	False	NA	NA	NA	46689178	46656131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
WTC11_00033472	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	151.644526772317	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	-46679602	True	NA	-6	True	AATAAA	-15	NA	46689147	46659676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
WTC11_00033473	chr16	-	628	4	FSM	ENSG00000069329.18	ENST00000562420.1	740	4	112	0	112	0	multi-exon	FALSE	canonical	3	563	junction_3	52.6265670128269	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCTCTAAAAATAGCAA	-46669066	False	NA	NA	False	NA	NA	NA	46669102	46661826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46661862_46662242_46662483_46662982_46663163_46668929
WTC11_00033476	chr16	-	6644	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	-4	0	0	multi-exon	TRUE	canonical	3	75	junction_1	133.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-46831139	False	NA	NA	False	AGTAAA	-18	NA	46831162	46796602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46803071_46824385_46824483_46831083
WTC11_00033477	chr16	-	7113	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	-277	9	-277	-5	multi-exon	FALSE	canonical	3	232	junction_2	48.5249076935409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCATTATCATGTAT	-46831434	False	260	NA	False	AGTAAA	-9	NA	46831457	46796611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
WTC11_00033478	chr16	-	1787	5	NIC	ENSG00000155330.10	novel	879	5	NA	NA	-211	680	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	148.435802621874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAGTGTGATAAAAGTT	-46831368	False	NA	NA	False	AATAAA	-25	NA	46831391	46802037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_46803071_46807968_46808135_46809602_46809786_46824385_46824483_46831083
WTC11_00033479	chr16	-	3034	10	NNC	ENSG00000069345.12	novel	3008	9	NA	NA	0	81670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	276.342290879255	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATAGCTAGGGTGGCAA	-46949295	True	NA	NA	False	NA	NA	NA	46973674	46873691	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_46873720_46955363_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
WTC11_00033480	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	54.0248785283225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-46949295	True	NA	-4	True	AATAAA	-17	NA	46973674	46955361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
WTC11_00033482	chr16	-	6614	9	FSM	ENSG00000171208.10	ENST00000303155.9	3241	9	-554	-2819	-318	-1112	multi-exon	FALSE	canonical	3	35	junction_4	26.5506591255283	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAAGCAATGTTTGTTA	-47144244	True	NA	NA	False	NA	NA	NA	47144263	47078814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122888_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
WTC11_00033485	chr16	-	3191	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	-6	0	2	multi-exon	TRUE	canonical	3	321	junction_3	30.4268366338542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAGTTTTTAAAT	-47454902	True	NA	NA	False	AATAAA	-22	NA	47461063	47154384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
WTC11_00033486	chr16	-	584	7	FSM	ENSG00000129636.13	ENST00000565262.1	584	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	135.9546493014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACACAAATTCTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	47258722	47155671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162602_47218867_47218947_47237964_47238009_47258631
WTC11_00033487	chr16	-	1042	6	NNC	ENSG00000129636.13	novel	550	5	NA	NA	10	11104	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	160.931538239091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCCTACTTTTACTTGA	-47454892	True	NA	NA	False	AATAAA	-20	NA	47461053	47436993	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_47437468_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
WTC11_00033490	chr16	-	2114	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	-4	0	4	multi-exon	FALSE	canonical	3	454	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCTGCTTTAGCTCT	-48381993	True	NA	NA	False	ATTAAA	-29	NA	48385413	48360526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48362431_48385203
WTC11_00033491	chr16	-	7077	7	FSM	ENSG00000102921.8	ENST00000262384.4	7077	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	20.9841209807162	4368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGACAGTGCCTTCTT	-48608570	True	NA	-4	True	AATAAA	-17	NA	48610180	48538725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48543262_48546146_48546255_48548006_48548115_48551385_48551483_48553538_48553670_48560753_48562445_48609774
WTC11_00033492	chr16	-	549	3	FSM	ENSG00000102921.8	ENST00000565423.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	92	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCAGGGCTGGCTGATCA	-48551430	False	NA	NA	False	NA	NA	NA	48551444	48542879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48543262_48548006_48548115_48551385
WTC11_00033493	chr16	-	296	3	FSM	ENSG00000102921.8	ENST00000565638.1	296	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	80	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGAGTTTCTTCAGAA	-48553643	False	NA	NA	False	NA	NA	NA	48553653	48546181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48546255_48548006_48548115_48553538
WTC11_00033494	chr16	-	371	1	FSM	ENSG00000243609.1	ENST00000478038.1	846	1	-145	620	-145	-620	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCATCAAGGAGTCTAA	NA	False	NA	NA	False	NA	NA	NA	48578514	48578143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48578100_48578500
WTC11_00033496	chr16	-	7900	9	FSM	ENSG00000102935.12	ENST00000561648.5	7907	9	0	7	0	-7	multi-exon	FALSE	canonical	3	10	junction_8	372.162913755522	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGACTGCTGGTTCT	NA	False	NA	-4	True	AATAAA	-17	NA	49827010	49487530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49822669_49822739_49826762
WTC11_00033497	chr16	-	7961	8	FSM	ENSG00000102935.12	ENST00000563137.7	7968	8	0	7	0	-7	multi-exon	FALSE	canonical	3	805	junction_4	45.2985560881743	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGACTGCTGGTTCT	-49854360	True	NA	-4	True	AATAAA	-17	NA	49856112	49487530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49855734
WTC11_00033501	chr16	-	5434	17	FSM	ENSG00000166164.16	ENST00000394688.8	5424	17	0	-10	0	0	multi-exon	FALSE	canonical	3	435	junction_14	56.181034110721	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGTCTCCAATCCGTG	-50357704	True	NA	NA	False	NA	NA	NA	50368988	50315946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320775_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
WTC11_00033502	chr16	-	2284	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	-141	2	0	-2	multi-exon	FALSE	canonical	3	157	junction_4	105.422198059754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGGAATGTGCTTGGG	-50357636	True	NA	-31	True	AATAAA	-19	NA	50368920	50319031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
WTC11_00033503	chr16	-	637	6	FSM	ENSG00000166164.16	ENST00000475877.5	671	6	34	0	34	0	multi-exon	FALSE	canonical	1	2	junction_5	195.966731870489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGATCTTTGGGATGT	-50361180	False	NA	NA	False	AATAAA	-3	NA	50361799	50334710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50361791
WTC11_00033505	chr16	-	5535	3	FSM	ENSG00000103449.13	ENST00000251020.9	5134	3	-405	4	-308	-4	multi-exon	FALSE	canonical	0	0	junction_1	94.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTGTCTGTGTTT	-51150066	True	NA	13	True	GATAAA	-3	NA	51151675	51135985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_51137553_51138687_51142146_51151165
WTC11_00033506	chr16	-	4961	7	FSM	ENSG00000103460.17	ENST00000219746.14	4959	7	0	-2	0	2	multi-exon	FALSE	canonical	3	82	junction_5	14.7836245743578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGAAATGTGGTATCTG	-52546498	True	NA	NA	False	AATAAA	-21	NA	52547143	52436414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464189_52468508_52468575_52546636
WTC11_00033507	chr16	-	3351	2	FSM	ENSG00000103460.17	ENST00000566696.1	3414	2	63	0	63	0	multi-exon	FALSE	canonical	3	129	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTTCCTTGAATAC	NA	False	NA	-1	True	AATAAA	-18	NA	52445663	52438005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_52439969_52444275
WTC11_00033508	chr16	-	4937	7	NIC	ENSG00000103460.17	novel	4959	7	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	31.0680257213461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGAAATGTGGTATCTG	-52546477	True	NA	NA	False	AATAAA	-21	NA	52547122	52436414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464186_52468508_52468575_52546636
WTC11_00033509	chr16	-	2194	1	FSM	ENSG00000279722.1	ENST00000624610.1	2337	1	-95	238	-95	-238	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGTTTTCCTACTGAA	-53490026	False	NA	NA	False	NA	NA	NA	53490038	53487844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53487800_53490000
WTC11_00033510	chr16	-	2567	10	NIC	ENSG00000166971.17	novel	2384	10	NA	NA	264	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	39.5699100046712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	-53501885	False	1057	1	True	ATTAAA	-19	NA	53502942	53491039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53502699
WTC11_00033511	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	29.6577181676807	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	-53502152	True	NA	1	True	ATTAAA	-19	NA	53503209	53491039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
WTC11_00033516	chr16	-	6697	26	FSM	ENSG00000103494.16	ENST00000621565.5	6678	26	0	-19	0	19	multi-exon	TRUE	canonical	3	17	junction_7	18.0423501795082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTTCCTGCCATTC	-53702613	True	NA	NA	False	AATAAA	-18	NA	53703841	53599234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53636438_53636513_53637694_53637855_53638309_53638412_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
WTC11_00033520	chr16	-	2429	4	FSM	ENSG00000103494.16	ENST00000568653.7	2429	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	36.8811906291299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGTTTTTATTTTC	-53702619	True	NA	NA	False	AATAAA	-23	NA	53703847	53693311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53695459_53696150_53696296_53700638_53700731_53703802
WTC11_00033521	chr16	-	899	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	91	-97	0	97	multi-exon	FALSE	canonical	3	83	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGGAAGGCATTAAAAACA	-53702619	True	NA	NA	False	NA	NA	NA	53703847	53695533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53696296_53700638_53700731_53703802
WTC11_00033522	chr16	-	2329	4	FSM	ENSG00000177508.12	ENST00000329734.4	2625	4	296	0	233	0	multi-exon	FALSE	canonical	1	2	junction_1	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTGTCTGCCCCCTCG	-54286389	False	NA	2	True	AATAAA	-26	NA	54286491	54283303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54283741_54284245_54284313_54284496_54285614_54285783
WTC11_00033524	chr16	-	1530	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	73	0	-71	multi-exon	FALSE	canonical	3	60	junction_4	9.36416040016402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAACCACTAGCATGTT	-54928549	True	NA	NA	False	NA	NA	NA	54928838	54918040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
WTC11_00033525	chr16	-	1790	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	8	85	8	-71	multi-exon	FALSE	canonical	3	16	junction_2	26.6211851727154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAACCACTAGCATGTT	-54929011	True	NA	NA	False	NA	NA	NA	54929181	54918040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
WTC11_00033528	chr16	-	3611	14	FSM	ENSG00000159461.15	ENST00000290649.10	3607	14	0	-4	0	4	multi-exon	FALSE	canonical	3	145	junction_10	13.8832835500172	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGTGTGGCTGGAA	-56424202	True	NA	-2	True	AATAAA	-17	NA	56425545	56361447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56363057_56363920_56364106_56367443_56367528_56369192_56369328_56385918_56386023_56389184_56389376_56401732_56401844_56402984_56403119_56404908_56405042_56405203_56405245_56407963_56408117_56409423_56409589_56414251_56414345_56425072
WTC11_00033529	chr16	-	2249	7	FSM	ENSG00000159461.15	ENST00000492830.5	2249	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	63.0936253163151	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGTTAGTAAATTTC	-56403098	False	NA	0	True	AATAAA	-22	NA	56403117	56361559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56363057_56363920_56364106_56367443_56367528_56369192_56369328_56385918_56386023_56401732_56401844_56402984
WTC11_00033531	chr16	-	4394	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	-1	0	1	multi-exon	TRUE	canonical	3	1092	junction_4	68.3073121187541	1836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTGATTGTTTTGGG	-56434239	True	NA	-5	True	AATAAA	-19	NA	56451332	56429131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
WTC11_00033532	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	45.6978946763926	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	-56519188	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
WTC11_00033533	chr16	-	2758	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	-25	-29	0	1	multi-exon	FALSE	canonical	0	0	junction_15	37.0729327643498	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCAGAATTGCCCATT	-56519213	True	NA	-9	True	TATAAA	-8	NA	56520049	56484355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
WTC11_00033535	chr16	-	4013	16	FSM	ENSG00000125124.14	ENST00000684531.1	4012	16	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_14	38.1505788510039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCAGAATTGCCCATT	-56519259	True	NA	-9	True	TATAAA	-8	NA	56520095	56484355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
WTC11_00033536	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	-56641999	True	NA	-11	True	ATTAAA	-14	NA	56668034	56666734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667965
WTC11_00033537	chr16	-	407	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	-1	0	0	multi-exon	FALSE	canonical	3	580	junction_2	97.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTTCCTGTTGTGTT	-56642030	True	NA	-6	True	ATTAAA	-19	NA	56668065	56666729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667311_56667378_56667965
WTC11_00033538	chr16	-	410	3	FSM	ENSG00000125144.14	ENST00000379811.4	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	225.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTTCCTGTTGTGTT	-56642030	True	NA	-6	True	ATTAAA	-19	NA	56668065	56666729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667311_56667381_56667965
WTC11_00033540	chr16	-	4404	7	NNC	ENSG00000172775.17	novel	1396	7	NA	NA	1217	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	367.647211633955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTTTTTCCTCTACT	-57177323	False	NA	NA	False	AATAAA	-16	NA	57177340	57152467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57175538
WTC11_00033542	chr16	-	4209	10	NNC	ENSG00000172775.17	novel	1055	8	NA	NA	-786	0	intron_retention	FALSE	non_canonical	0	0	junction_3	381.869410811576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-57182559	False	NA	NA	False	AATAAA	-18	NA	57182576	57152465	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57174619_57174689_57175538_57175701_57178501_57178853_57181553
WTC11_00033544	chr16	-	2629	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	353.177677978411	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-57178253	True	NA	NA	False	AATAAA	-18	NA	57186055	57152465	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57186030
WTC11_00033545	chr16	-	2837	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	348.718447397833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTTTTTCCTCTACT	-57178253	True	NA	NA	False	AATAAA	-16	NA	57186055	57152467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57185820
WTC11_00033552	chr16	-	2039	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	-18	0	18	multi-exon	FALSE	canonical	3	962	junction_8	99.8620924074796	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCTCCAAGTTTGCT	-57438330	True	NA	0	True	AATAAA	-33	NA	57447385	57428168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
WTC11_00033553	chr16	-	2034	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	-18	0	18	multi-exon	FALSE	canonical	3	147	junction_7	317.792286722003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCTCCAAGTTTGCT	-57438364	True	NA	0	True	AATAAA	-33	NA	57447419	57428168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
WTC11_00033561	chr16	-	2767	9	FSM	ENSG00000125170.11	ENST00000340099.9	2767	9	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_8	40.9906620463734	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCTGTTAATCAATAA	-57485293	True	NA	-3	True	AATAAA	-15	NA	57486493	57471960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
WTC11_00033562	chr16	-	1821	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	27	0	25	0	multi-exon	FALSE	canonical	3	158	junction_1	15.3010603874239	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	-57479837	False	1200	NA	False	NA	NA	NA	57479847	57472876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
WTC11_00033566	chr16	-	2432	9	FSM	ENSG00000135736.6	ENST00000258214.3	2432	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	6.49879796577798	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAATGAATGAATG	-57536368	True	NA	NA	False	AATAAA	-15	NA	57536571	57512180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57512871_57515340_57515445_57516292_57516464_57518067_57518278_57518624_57518742_57521067_57521177_57525900_57526128_57528592_57529325_57536499
WTC11_00033568	chr16	-	810	2	FSM	ENSG00000140859.16	ENST00000565397.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTGGTCTCTCGAATTT	NA	False	NA	-121	True	NA	NA	NA	57760945	57758319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57758910_57760725
WTC11_00033571	chr16	-	3754	2	NNC	ENSG00000070770.10	novel	7382	9	NA	NA	5859	60178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAGAAAAA	-58163223	False	NA	NA	False	NA	NA	NA	58163267	58097728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58097769_58159553
WTC11_00033572	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	23.7116005364463	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-58123309	True	NA	0	True	AATAAA	-24	NA	58129381	58113591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
WTC11_00033573	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	9.31396800509858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	-58123299	True	NA	-14	True	AATAAA	-10	NA	58129371	58113605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
WTC11_00033575	chr16	-	1896	12	FSM	ENSG00000070770.10	ENST00000262506.8	1887	12	0	-9	0	9	multi-exon	FALSE	canonical	3	71	junction_1	29.8738394082805	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCAGTATGGAAAGGG	-58187785	True	NA	NA	False	AATAAA	-25	NA	58198106	58157897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58158354_58164053_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
WTC11_00033576	chr16	-	5357	9	FSM	ENSG00000070770.10	ENST00000563307.2	7382	9	2025	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	14.6799182559032	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGGACCTTAACTTG	-58186811	False	NA	-16	True	AATAAA	-45	NA	58186856	58159550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754
WTC11_00033577	chr16	-	662	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	-8	1	-8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTAAGTCCGACCCTTT	-58392645	True	NA	-12	True	AATAAA	-23	NA	58392815	58392153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58392200_58392800
WTC11_00033579	chr16	-	7671	49	FSM	ENSG00000125107.19	ENST00000569240.5	7660	49	0	-11	0	0	multi-exon	FALSE	canonical	3	203	junction_30	167.555504899786	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGCTTTGTGCAA	-58612841	True	NA	-6	True	AATACA	-24	NA	58629834	58520683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556861_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
WTC11_00033580	chr16	-	7668	49	NIC	ENSG00000125107.19	novel	8411	49	NA	NA	13	4	combination_of_known_junctions	FALSE	canonical	3	135	junction_10	177.691474141667	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTCTTGGCTT	-58612809	True	NA	-13	True	AATACA	-17	NA	58629802	58520690	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536967_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
WTC11_00033585	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_12	74.7638430140012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-58612845	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
WTC11_00033591	chr16	-	496	4	FSM	ENSG00000125107.19	ENST00000568158.1	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11.7284080571728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCTCGGCCGCCTGCT	-58612822	True	NA	NA	False	ACTAAA	-22	NA	58629815	58599373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58599512_58623281_58623410_58624652_58624795_58629727
WTC11_00033595	chr16	-	4034	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	27	-3	0	3	multi-exon	TRUE	canonical	3	83	junction_11	22.5875706331477	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCCTGTGTCTGATCC	-58682987	True	NA	3	True	AATAAA	-22	NA	58684743	58665105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
WTC11_00033601	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_5	56.9151415120206	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	-58715996	True	NA	-17	True	AATAAA	-17	NA	58734316	58707130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
WTC11_00033605	chr16	-	572	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTATCAACCTCATAAT	NA	False	NA	NA	False	AATAAA	-36	NA	61055964	61055392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_61055400_61056000
WTC11_00033607	chr16	-	6660	13	FSM	ENSG00000140937.14	ENST00000268603.9	6722	13	0	62	0	-62	multi-exon	FALSE	canonical	2	3	junction_11	4.28417631134232	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTACACAGTGCCTGAA	-65121748	True	NA	NA	False	NA	NA	NA	65122063	64943814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_64948100_64950766_64951019_64971578_64971697_64971930_64972065_64972903_64973041_64982047_64982302_64988156_64988345_64991767_64991936_64992914_64993035_64998561_64998857_65004641_65005042_65053803_65053929_65121879
WTC11_00033610	chr16	-	405	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	193.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	-65231440	True	NA	-19	True	AATAAA	-27	NA	65235004	65227894	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65228022_65233014_65233174_65234885
WTC11_00033612	chr16	-	2110	2	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-7	combination_of_known_splicesites	FALSE	canonical	3	650	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTGAACACATGTG	-65231440	True	NA	-26	True	AATAAA	-20	NA	65235004	65227901	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65228022_65233014
WTC11_00033613	chr16	-	533	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-1	combination_of_known_splicesites	FALSE	canonical	3	371	junction_2	139.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAACACATGTGTACAGC	-65231440	True	NA	-20	True	AATAAA	-26	NA	65235004	65227895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65228022_65233014_65233303_65234885
WTC11_00033614	chr16	-	345	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-3	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	91.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGAACACATGTGTACA	-65231440	True	NA	-22	True	AATAAA	-24	NA	65235004	65227897	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65228022_65233014_65233117_65234885
WTC11_00033615	chr16	-	593	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-78	5	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	220.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65234996	False	NA	-101	True	AATAAA	-22	NA	65235011	65229840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65230206_65233014_65233117_65234885
WTC11_00033616	chr16	-	2352	2	ISM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-2	-71	2	intron_retention	FALSE	canonical	3	908	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTGTTTGGTGGTCTC	-65231440	True	NA	-104	True	AATAAA	-19	NA	65235004	65229843	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_65230206_65233014
WTC11_00033617	chr16	-	518	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-103	7	combination_of_known_splicesites	FALSE	canonical	3	1386	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-65235021	False	NA	-99	True	AATAAA	-24	NA	65235036	65229838	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65230206_65234885
WTC11_00033621	chr16	-	3414	5	FSM	ENSG00000183723.13	ENST00000330687.8	3414	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	30.4836021493524	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTTGTCTCTCCTCACT	-66693419	True	NA	-10	True	AATAAA	-15	NA	66696707	66614749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66617359_66622061_66622223_66623403_66623503_66636404_66636582_66696339
WTC11_00033622	chr16	-	8156	4	FSM	ENSG00000183723.13	ENST00000394106.7	8153	4	0	-3	0	3	multi-exon	FALSE	canonical	3	75	junction_3	3.74165738677394	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTCTCTCCTCACTCTG	-66693455	True	NA	-7	True	AATAAA	-18	NA	66696743	66614746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66622223_66623403_66623503_66636404_66636582_66696339
WTC11_00033623	chr16	-	4327	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	-1	0	1	multi-exon	FALSE	canonical	3	217	junction_9	29.6436005835249	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGGCTTTCTTTATG	-66744099	True	NA	-2	True	AATAAA	-24	NA	66751609	66720891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
WTC11_00033631	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_19	81.3157383750478	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-66814340	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
WTC11_00033632	chr16	-	1911	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	-2	0	0	multi-exon	FALSE	canonical	3	139	junction_20	328.570764828522	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-66814340	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
WTC11_00033633	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	265.255851333513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-66814319	True	NA	NA	False	NA	NA	NA	66830955	66802911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
WTC11_00033640	chr16	-	670	5	NNC	ENSG00000166595.12	novel	668	5	NA	NA	0	4	intron_retention	FALSE	non_canonical	0	0	junction_4	577.952149835953	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATGCCTTGGTGTCTT	-66923482	True	NA	-7	True	AATAAA	-20	NA	66934402	66932060	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934065_66934222
WTC11_00033642	chr16	-	678	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	-10	0	10	multi-exon	FALSE	canonical	0	0	junction_4	577.952149835953	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTGTCTTTCATCT	-66923482	True	NA	-1	True	AATAAA	-26	NA	66934402	66932054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
WTC11_00033643	chr16	-	718	4	FSM	ENSG00000166595.12	ENST00000563490.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	1225	junction_1	85.7217721598324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCATACTGGTATC	-66923497	True	NA	-132	True	NA	NA	NA	66934417	66932185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986
WTC11_00033646	chr16	-	2829	3	FSM	ENSG00000196123.13	ENST00000561679.5	2824	3	0	-5	0	0	multi-exon	TRUE	canonical	3	82	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCTTTGTCTAC	-67179532	False	NA	0	True	ATTAAA	-17	NA	67179552	67175598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67176976_67178009_67178108_67178198
WTC11_00033647	chr16	-	4392	7	NIC	ENSG00000196123.13	novel	3550	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_5	28.8039349163733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCTTTGTCTAC	-67181400	True	NA	0	True	ATTAAA	-17	NA	67183952	67175598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
WTC11_00033650	chr16	-	3555	8	FSM	ENSG00000196123.13	ENST00000290881.11	3550	8	0	-5	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.7929225899825	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCTTTGTCTAC	-67183834	False	20	0	True	ATTAAA	-17	NA	67184040	67175598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67176976_67178009_67178108_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
WTC11_00033660	chr16	-	1641	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	-5	0	0	multi-exon	TRUE	canonical	3	371	junction_6	22.2435498561736	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCGTTTAGGCCCT	-67475058	True	NA	0	True	AATAAA	-26	NA	67481157	67438013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
WTC11_00033667	chr16	-	2052	12	FSM	ENSG00000102977.17	ENST00000219251.13	2052	12	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_11	109.506707594852	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGCCGCCGCCTCTTTG	-67660531	False	NA	-5	True	AATAAA	-37	NA	67660810	67657511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
WTC11_00033671	chr16	-	805	7	FSM	ENSG00000102977.17	ENST00000602945.5	805	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	147.720080633007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCTGTCAGAGGACAC	-67656755	True	NA	NA	False	NA	NA	NA	67660214	67658742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67658833_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902
WTC11_00033675	chr16	-	726	5	FSM	ENSG00000124074.12	ENST00000602415.2	735	5	9	0	9	0	multi-exon	FALSE	canonical	3	12	junction_4	19.1049731745428	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGCCATCAAGATCTT	-67665986	False	NA	NA	False	NA	NA	NA	67666265	67663217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67664063_67666070
WTC11_00033678	chr16	-	5507	2	FSM	ENSG00000141098.13	ENST00000602279.2	5507	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATTCGTTTTGATT	-67718264	True	NA	NA	False	AATAAA	-23	NA	67719300	67680433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67685803_67719162
WTC11_00033681	chr16	-	2374	14	FSM	ENSG00000141084.12	ENST00000602677.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	17.1705679104351	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGCTTATTATTTTC	-67805668	True	NA	NA	False	NA	NA	NA	67806560	67726030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
WTC11_00033685	chr16	-	1745	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	-8	0	0	multi-exon	TRUE	canonical	3	21	junction_10	138.556847539196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-67824819	True	NA	0	True	AATAAA	-16	NA	67833896	67828156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
WTC11_00033688	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_9	28.2055944017416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-67824836	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
WTC11_00033689	chr16	-	898	2	FSM	ENSG00000102901.13	ENST00000574569.1	897	2	0	-1	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATCAATAAAGTGTCAT	-67820093	False	NA	-28	True	NA	NA	NA	67829170	67828184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828579_67828666
WTC11_00033703	chr16	-	2365	5	FSM	ENSG00000141086.18	ENST00000572144.5	2360	5	0	-5	0	0	multi-exon	FALSE	canonical	3	49	junction_4	7.75806032459145	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGGCCATGGCATGAA	-67932314	False	NA	-3	True	AATAAA	-18	NA	67932365	67929573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67930096_67930184_67930319_67930407_67930589_67930725_67930808_67930919
WTC11_00033706	chr16	-	5114	6	FSM	ENSG00000261884.2	ENST00000575231.1	5685	6	0	571	0	-571	multi-exon	FALSE	canonical	3	38	junction_5	336.202676967332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCCAGCACCCGCTC	-67936007	False	NA	NA	False	NA	NA	NA	67936017	67930184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67930319_67930407_67930589_67930725_67934672_67934796_67935479_67935581_67935698_67935962
WTC11_00033709	chr16	-	561	4	ISM	ENSG00000261884.2	ENST00000573493.1	573	5	0	3581	0	-3581	5prime_fragment	FALSE	canonical	3	86	junction_2	309.483799611906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67928181	True	NA	NA	False	AATAAA	-20	NA	67935641	67934505	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_67934672_67934796_67934949_67935295_67935479_67935581
WTC11_00033710	chr16	-	540	3	ISM	ENSG00000205220.12	ENST00000570985.1	591	4	154	0	154	0	intron_retention	FALSE	canonical	3	723	junction_2	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67928181	True	NA	NA	False	AATAAA	-20	NA	67935641	67934505	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_67934672_67934796_67934949_67935419
WTC11_00033711	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_2	15.1730755689881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67935785	False	NA	NA	False	AATAAA	-20	NA	67935795	67934505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
WTC11_00033712	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	355.400722381635	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67936840	False	NA	NA	False	AATAAA	-20	NA	67936850	67934505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
WTC11_00033714	chr16	-	1085	5	FSM	ENSG00000213398.8	ENST00000573538.5	1083	5	0	-2	0	2	multi-exon	FALSE	canonical	3	11	junction_2	27.6134025429682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGGCTATGTTTCAGG	-67942920	False	NA	1	True	AATAAA	-24	NA	67942930	67939879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67940479_67940736_67940832_67942362_67942588_67942670_67942767_67942860
WTC11_00033715	chr16	-	1496	6	FSM	ENSG00000213398.8	ENST00000264005.10	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	24.1163844719726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCACCCTAGATGTACAGC	-67944110	False	NA	NA	False	NA	NA	NA	67944120	67939749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055_67943213_67943947
WTC11_00033716	chr16	-	6103	28	NIC	ENSG00000124067.17	novel	4708	24	NA	NA	0	3588	intron_retention	TRUE	canonical	3	33	junction_1	72.3654041284759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCTGATGGCTATGT	-67966419	True	NA	-5	True	AATAAA	-18	NA	67968584	67939885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
WTC11_00033719	chr16	-	4708	24	FSM	ENSG00000124067.17	ENST00000316341.8	4708	24	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_12	28.6291720034482	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTCTGCAGAGGCAG	-67966472	True	NA	NA	False	AATAAA	-17	NA	67968637	67943473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
WTC11_00033728	chr16	-	2307	1	FSM	ENSG00000182810.7	ENST00000332395.7	2317	1	-56	66	-56	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCCCAACTCGGTAGC	NA	False	NA	NA	False	NA	NA	NA	68023288	68020981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68021000_68023300
WTC11_00033730	chr16	-	3429	15	FSM	ENSG00000103067.14	ENST00000473183.7	3429	15	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	19.7397609728514	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCCTTAAAGATCCAT	-68233152	True	NA	1	True	TATAAA	-25	NA	68236127	68229032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232370_68232504_68232576_68232688_68232760_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
WTC11_00033731	chr16	-	3228	13	FSM	ENSG00000103067.14	ENST00000251366.7	3228	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	68.320476432765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTGCTGTAAACATA	-68233095	True	NA	-23	True	CATAAA	-36	NA	68236070	68229116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232576_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
WTC11_00033732	chr16	-	398	2	FSM	ENSG00000103067.14	ENST00000565213.2	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGGCTGCTCTTTGTGCG	-68232474	False	NA	NA	False	NA	NA	NA	68232506	68231966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68232104_68232245
WTC11_00033733	chr16	-	590	5	FSM	ENSG00000103067.14	ENST00000562738.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	106.560722125932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTACCCAGGAGGCACTAA	-68234138	False	NA	NA	False	NA	NA	NA	68234170	68232540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68232685_68232760_68232816_68233326_68233426_68233767_68233883_68233993
WTC11_00033741	chr16	-	1633	2	FSM	ENSG00000260577.2	ENST00000562172.2	1682	2	1	48	1	-48	multi-exon	FALSE	canonical	1	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAACTTTCTGTAAAA	-68646140	True	NA	-57	True	TATAAA	-7	NA	68646167	68644295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68645741_68645979
WTC11_00033742	chr16	-	2730	3	NNC	ENSG00000286140.2	novel	2761	3	NA	NA	10659	6853	intron_retention	FALSE	non_canonical	0	0	junction_1	147.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCTAGAAATCCAGGG	NA	False	NA	NA	False	NA	NA	NA	69121492	69111156	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69111190_69118009_69120650_69121435
WTC11_00033744	chr16	-	2944	5	NNC	ENSG00000168802.14	novel	2921	4	NA	NA	0	6853	intron_retention	FALSE	non_canonical	0	0	junction_1	235.325306756413	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCTAGAAATCCAGGG	-69128679	True	NA	NA	False	NA	NA	NA	69132578	69111156	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69111190_69118009_69120650_69121052_69121171_69121435_69121494_69132483
WTC11_00033745	chr16	-	1081	3	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	10694	0	combination_of_known_splicesites	FALSE	canonical	3	181	junction_1	57	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	NA	False	NA	-10	True	AATAAA	-15	NA	69121457	69118009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_69118526_69120106_69120650_69121435
WTC11_00033746	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	61	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132132	False	3899	-10	True	AATAAA	-15	NA	69132151	69118009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121435_69121494_69132088
WTC11_00033747	chr16	-	2780	3	FSM	ENSG00000286140.2	ENST00000519520.7	2803	3	23	0	23	0	multi-exon	FALSE	canonical	3	295	junction_1	159.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69128666	True	NA	-10	True	AATAAA	-15	NA	69132565	69118009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121435_69121494_69132483
WTC11_00033748	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	69.5956575912287	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132569	False	NA	-10	True	AATAAA	-15	NA	69132588	69118009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
WTC11_00033753	chr16	-	853	3	FSM	ENSG00000168802.14	ENST00000522497.1	831	3	0	-22	0	0	multi-exon	FALSE	canonical	3	27	junction_2	245.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAACCCCAGGTTAGGG	-69128674	True	NA	NA	False	GGGGCT	-20	NA	69132573	69120004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121052_69121171_69132483
WTC11_00033757	chr16	-	4629	6	FSM	ENSG00000213380.16	ENST00000306875.10	4629	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	52.6269892735657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGAAGCTCTGCAGA	-69330212	True	NA	NA	False	AGTAAA	-39	NA	69339564	69326427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69329180_69330812_69331096_69332713_69332883_69334520_69335349_69336504_69336713_69339175
WTC11_00033758	chr16	-	1731	4	FSM	ENSG00000213380.16	ENST00000562081.2	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_3	7.36357401145817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATCACTCCAAAAAGATC	-69330231	True	NA	42	True	AGTAAA	-24	NA	69339583	69332595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69332883_69334520_69335349_69336504_69336713_69339175
WTC11_00033759	chr16	-	3002	10	FSM	ENSG00000132604.11	ENST00000254942.8	2996	10	0	-6	0	6	multi-exon	FALSE	canonical	3	78	junction_2	52.8354071330351	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTGTTTAATTGCAGCA	-69382654	True	NA	-1	True	ATTAAA	-23	NA	69386007	69355560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69357057_69357517_69357562_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
WTC11_00033760	chr16	-	2850	10	NNC	ENSG00000132604.11	novel	2996	10	NA	NA	120	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	64.9708386627663	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTAAGTAGCTGTTT	-69382515	True	NA	-11	True	ATTAAA	-13	NA	69385868	69355570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69357057_69357517_69357559_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
WTC11_00033762	chr16	-	3214	7	ISM	ENSG00000132604.11	ENST00000254942.8	2996	10	19	9383	0	17	5prime_fragment	FALSE	canonical	3	169	junction_2	18.9245578254523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTATCTAGGGCTGCTT	-69382635	True	NA	-6	True	AATAAA	-34	NA	69385988	69364949	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
WTC11_00033767	chr16	-	2372	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	59	-1326	0	0	multi-exon	FALSE	canonical	3	50	junction_2	118.113028493896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	-69721431	True	NA	0	True	AATAAA	-26	NA	69726525	69709400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
WTC11_00033768	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	29.9492904757358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	-69721466	True	NA	0	True	AATAAA	-26	NA	69726560	69709400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
WTC11_00033771	chr16	-	1740	10	NNC	ENSG00000141101.13	novel	1716	9	NA	NA	0	4464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	164.992255710516	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCAGGGAGCAGGTGCG	-69749200	True	NA	NA	False	NA	NA	NA	69754924	69737406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69737434_69741871_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
WTC11_00033776	chr16	-	1629	1	FSM	ENSG00000260290.2	ENST00000566277.2	1402	1	-43	-184	-43	184	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTAGTATATTATTTAA	-69757954	False	NA	NA	False	ATTAAA	-11	NA	69757980	69756351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69756400_69758000
WTC11_00033777	chr16	-	4063	7	NIC	ENSG00000226232.8	novel	1212	6	NA	NA	-2387	101	intron_retention	FALSE	canonical	3	39	junction_1	19.4821855949366	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTATGTTATTGCTTT	NA	False	NA	NA	False	AATAAA	-31	NA	69992471	69976286	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_69978004_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596
WTC11_00033778	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	73.6969088564778	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	-70064440	True	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
WTC11_00033784	chr16	-	619	3	FSM	ENSG00000261556.10	ENST00000573141.6	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTCTTGTGTTTGGCTT	NA	False	NA	1	True	ACTAAA	-29	NA	70221294	70219573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70219992_70220720_70220881_70221253
WTC11_00033787	chr16	-	3700	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	23	-6	0	6	multi-exon	FALSE	canonical	3	52	junction_20	268.487518331858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTCTTTAAACAACGGAAG	-70270574	True	NA	NA	False	NA	NA	NA	70289557	70251976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
WTC11_00033788	chr16	-	3897	20	FSM	ENSG00000090861.17	ENST00000675917.1	3897	20	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_19	280.15228348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCTGTAGTGCCTCCC	-70279285	False	NA	NA	False	NA	NA	NA	70279340	70252027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70278899
WTC11_00033792	chr16	-	3389	21	FSM	ENSG00000090861.17	ENST00000675953.1	3389	21	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_17	276.600592009489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271889_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00033794	chr16	-	6011	19	FSM	ENSG00000090861.17	ENST00000674962.1	6004	19	0	-7	0	0	multi-exon	FALSE	canonical	3	1072	junction_14	90.0840485461723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270574	True	NA	-28	True	AATAAA	-10	NA	70289557	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00033800	chr16	-	3706	20	FSM	ENSG00000090861.17	ENST00000674848.1	3699	20	0	-7	0	0	multi-exon	FALSE	canonical	3	52	junction_19	269.752394930308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270574	True	NA	-28	True	AATAAA	-10	NA	70289557	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
WTC11_00033802	chr16	-	3491	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	-2	0	0	multi-exon	FALSE	canonical	2	14	junction_5	275.761287166999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270574	True	NA	-28	True	AATAAA	-10	NA	70289557	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00033803	chr16	-	4245	20	FSM	ENSG00000090861.17	ENST00000675403.1	4243	20	0	-2	0	0	multi-exon	FALSE	canonical	3	1072	junction_15	100.932082701981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270574	True	NA	-28	True	AATAAA	-10	NA	70289557	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00033806	chr16	-	8803	6	FSM	ENSG00000157350.13	ENST00000393640.8	8872	6	70	-1	70	0	multi-exon	FALSE	canonical	3	217	junction_4	15.2761251631426	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTACACTTAGGCCG	NA	False	NA	-10	True	AATAAA	-16	NA	70400568	70375976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191
WTC11_00033810	chr16	-	1987	11	FSM	ENSG00000103051.20	ENST00000526700.5	1978	11	0	-9	0	-1	multi-exon	FALSE	canonical	3	7	junction_6	182.871977076861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGCTGTTACCAG	-70508739	False	NA	-1	True	AATAAA	-18	NA	70508757	70480568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496380_70497220_70497388_70497936_70498056_70500957_70501092_70508405
WTC11_00033811	chr16	-	2822	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	-2	0	-1	multi-exon	FALSE	canonical	3	415	junction_11	30.0848594052241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGCTGTTACCAG	-70516977	True	NA	-1	True	AATAAA	-18	NA	70523554	70480568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
WTC11_00033812	chr16	-	2999	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	0	1	0	-1	multi-exon	FALSE	canonical	2	11	junction_16	138.320716086257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGCTGTTACCAG	-70516981	True	NA	-1	True	AATAAA	-18	NA	70523558	70480568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
WTC11_00033813	chr16	-	2765	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	-4	0	-1	multi-exon	FALSE	canonical	3	7	junction_6	110.994965439614	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGCTGTTACCAG	-70516983	True	NA	-1	True	AATAAA	-18	NA	70523560	70480568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
WTC11_00033817	chr16	-	844	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_2	21	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGACTACATTGAGTCA	-70620160	True	NA	73	True	ATTAAA	-22	NA	70621700	70616419	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70616926_70619646_70619749_70621464
WTC11_00033818	chr16	-	1260	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	26.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGACTACATTGAGTCA	-70620257	True	NA	73	True	ATTAAA	-22	NA	70621797	70616419	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70617059_70619646_70619935_70621464
WTC11_00033820	chr16	-	407	4	FSM	ENSG00000132613.16	ENST00000562883.6	407	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.09120616516523	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACCAGCCAGGTGAGG	-70675638	False	NA	NA	False	NA	NA	NA	70678339	70674319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70674433_70676880_70676979_70677791_70677900_70678251
WTC11_00033822	chr16	-	3614	1	FSM	ENSG00000103043.15	ENST00000571759.1	3609	1	0	-5	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGGCCTGCTCCTTCCC	-70691030	False	NA	3	True	AATAAA	-25	NA	70691049	70687435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70687400_70691000
WTC11_00033823	chr16	-	3099	19	FSM	ENSG00000103043.15	ENST00000261776.10	3096	19	0	-3	0	3	multi-exon	FALSE	canonical	3	275	junction_5	24.2653158964716	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGGCCTGCTCCTTCCC	-70791220	True	NA	3	True	AATAAA	-25	NA	70801158	70687435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
WTC11_00033829	chr16	-	5084	3	NIC	ENSG00000180917.18	novel	4875	3	NA	NA	52	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	18.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGTAATCTGTTTAA	NA	False	NA	0	True	ATTAAA	-19	NA	71289557	71281387	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71285940_71288877_71288938_71289085
WTC11_00033831	chr16	-	6931	2	FSM	ENSG00000180917.18	ENST00000564690.1	2772	2	-3	-4156	-3	-912	multi-exon	FALSE	canonical	3	45	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTGTGTTCATCTTT	-71288113	True	NA	-4	True	AATAAA	-13	NA	71289432	71282303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71288938_71289135
WTC11_00033839	chr16	-	1172	1	FSM	ENSG00000157429.16	ENST00000617615.1	1286	1	114	0	114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTCTTAATTTTTG	-71564788	False	NA	NA	False	AATAAA	-15	NA	71564824	71563652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71563700_71564800
WTC11_00033841	chr16	-	6878	24	NNC	ENSG00000166747.13	novel	6602	23	NA	NA	1	22053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.4865026868334	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTATCTTTTAAATCAT	-71806423	True	NA	NA	False	NA	NA	NA	71809083	71706946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_71706974_71728999_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
WTC11_00033842	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_22	22.251984775437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-71806174	False	2660	-1	True	AATAAA	-25	NA	71808834	71728999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
WTC11_00033848	chr16	-	2068	9	FSM	ENSG00000102984.15	ENST00000563878.5	1187	9	33	-914	0	1	multi-exon	FALSE	canonical	0	0	junction_3	22.6370824091799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCCTTTCTTGCTTTTCT	-71882987	True	NA	-8	True	AATAAA	-17	NA	71884125	71859683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
WTC11_00033849	chr16	-	1992	8	FSM	ENSG00000102984.15	ENST00000425432.6	1987	8	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.5555494269771	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTGCTTTTCTCTCA	-71883044	True	NA	-4	True	AATAAA	-21	NA	71884182	71859679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
WTC11_00033850	chr16	-	1618	6	NIC	ENSG00000102984.15	novel	1987	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	27.229395880188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-71882968	True	NA	-9	True	AATAAA	-16	NA	71884106	71859684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71860673_71864137_71864243_71864902_71865049_71879906_71880024_71883210_71883274_71883907
WTC11_00033857	chr16	-	688	1	FSM	ENSG00000263232.2	ENST00000573189.2	1507	1	-97	916	-97	-916	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGTCGAAAGAGATCCAC	-72006610	False	NA	NA	False	AAGAAA	-30	NA	72006640	72005952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_72006000_72006600
WTC11_00033858	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	21.0765799460496	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72092251	True	NA	-3	True	AATAAA	-17	NA	72093620	72084856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
WTC11_00033859	chr16	-	4426	1	FSM	ENSG00000259972.3	ENST00000621548.1	2032	1	-1208	-1186	-121	574	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGGAAAGGGACTGTG	NA	False	NA	NA	False	AATAAA	-5	NA	74308978	74304552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74304600_74309000
WTC11_00033860	chr16	-	2154	14	FSM	ENSG00000214331.8	ENST00000566802.5	2320	14	1	165	1	0	multi-exon	FALSE	canonical	2	9	junction_8	18.4326697363531	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGGCCCCCTCCCCT	-74366265	True	NA	NA	False	NA	NA	NA	74368160	74332566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74332657_74334891_74334987_74336593_74336707_74337474_74337624_74338444_74338579_74338738_74338895_74342129_74342255_74344778_74344972_74348866_74349016_74350616_74350739_74352039_74352379_74353776_74353911_74360632_74360892_74368064
WTC11_00033862	chr16	-	9300	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	2	-15	0	2	multi-exon	FALSE	canonical	3	755	junction_19	50.0039358450912	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGGTGACTGGGAG	-74594304	True	NA	1	True	AATAAA	-29	NA	74607112	74447424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
WTC11_00033863	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	2	-2	0	2	multi-exon	FALSE	canonical	3	104	junction_1	152.140958659314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGGTGACTGGGAG	-74594304	True	NA	1	True	AATAAA	-29	NA	74607112	74447424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
WTC11_00033869	chr16	-	5173	15	NNC	ENSG00000168411.14	novel	3033	14	NA	NA	-73	53844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.149386678682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGCACCATATATAGT	NA	False	NA	NA	False	NA	NA	NA	74666950	74567554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_74567580_74621393_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74664623_74664746_74666785
WTC11_00033870	chr16	-	4955	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	-7	0	7	multi-exon	FALSE	canonical	3	250	junction_12	59.7701616379128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGCCTTTTGTCTCT	-74661285	True	NA	-4	True	AATAAA	-22	NA	74666877	74621391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
WTC11_00033878	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	5.97411081249754	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	-74700492	True	NA	-1	True	AATAAA	-22	NA	74700862	74671854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
WTC11_00033879	chr16	-	973	5	FSM	ENSG00000168404.13	ENST00000573267.1	1004	5	31	0	31	0	multi-exon	FALSE	canonical	1	1	junction_4	12.6762573340872	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTCAGCACACTTTAT	-74700559	True	NA	NA	False	NA	NA	NA	74700929	74691364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74691464_74692341_74692417_74695297_74695760_74700452_74700543_74700682
WTC11_00033880	chr16	-	2420	7	FSM	ENSG00000103089.9	ENST00000219368.8	2405	7	0	-15	0	1	multi-exon	FALSE	canonical	3	35	junction_5	7.3352270282218	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTCATCAGACTCCC	-74774074	True	NA	NA	False	AATAAA	-26	NA	74774820	74712953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74714270_74716346_74716600_74718987_74719161_74726224_74726332_74727243_74727387_74740022_74740116_74774485
WTC11_00033881	chr16	-	5833	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	45	0	-45	multi-exon	TRUE	canonical	3	131	junction_11	22.0943431674264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGATATTCTCTCAGCCGC	-74981381	True	NA	NA	False	NA	NA	NA	74985123	74871406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
WTC11_00033887	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.8771427521969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	-74981341	True	NA	1	True	ATTAAA	-18	NA	74985083	74908732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
WTC11_00033892	chr16	-	5372	11	FSM	ENSG00000166816.15_ENSG00000247033.1	ENST00000450168.3	2007	11	13	-3378	0	115	multi-exon	FALSE	canonical	3	24	junction_6	7.37631344236401	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTAAGTCTTTTTTTGT	-75116457	True	NA	NA	False	AAAACA	-20	NA	75116767	75108485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
WTC11_00033894	chr16	-	4085	7	FSM	ENSG00000050820.17	ENST00000162330.10	4085	7	0	0	0	0	multi-exon	TRUE	canonical	3	380	junction_6	108.033945282644	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTATTTGTGTTTTAC	-75248620	True	NA	0	True	NA	NA	NA	75251624	75228180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75251470
WTC11_00033897	chr16	-	3192	7	FSM	ENSG00000050820.17	ENST00000538440.6	3192	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	159.07728729562	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCGTTATTGGTTTTC	-75262215	True	NA	-79	True	NA	NA	NA	75266007	75229102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75265824
WTC11_00033899	chr16	-	1911	1	FSM	ENSG00000050820.17	ENST00000546196.2	1340	1	-609	38	124	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGGGCCAAGAGGAGAA	-75265806	False	NA	-38	True	NA	NA	NA	75265824	75263913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75263900_75265800
WTC11_00033900	chr16	-	1296	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	-3	0	3	multi-exon	FALSE	canonical	3	911	junction_4	96.6443939858329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCTCACCTTCCCTTTA	-75418950	True	NA	20	True	AATAAA	-44	NA	75433503	75293706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
WTC11_00033901	chr16	-	933	3	FSM	ENSG00000153774.9	ENST00000562602.1	699	3	-44	-190	-44	-8	multi-exon	FALSE	canonical	3	9	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGACGACCTCGCTCA	NA	False	NA	9	True	AATAAA	-33	NA	75305482	75293717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75294043_75301756_75301906_75305023
WTC11_00033906	chr16	-	289	1	FSM	ENSG00000252122.1	ENST00000516313.1	135	1	58	-212	58	212	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGCGAAGGTGGGTGG	-75409366	False	NA	NA	False	NA	NA	NA	75409408	75409119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75409100_75409400
WTC11_00033907	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	-75460560	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75447689_75451668_75451840_75464467
WTC11_00033908	chr16	-	5066	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	-31	-76	17	76	multi-exon	FALSE	canonical	3	82	junction_1	36.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGAGTATTGATACAGT	-75464698	False	NA	72	True	AAGAAA	-25	NA	75464720	75442977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75447689_75451737_75451840_75464467
WTC11_00033912	chr16	-	8380	3	FSM	ENSG00000183196.10	ENST00000332272.9	8370	3	0	-10	0	10	multi-exon	FALSE	canonical	3	9	junction_1	9	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTAGTCTAGTGTTTT	-75493307	True	NA	1	True	GATAAA	-27	NA	75495441	75472041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75479845_75481816_75481892_75494939
WTC11_00033923	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	311.881158685255	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-75633567	True	NA	-21	True	AGTAAA	-3	NA	75647665	75627473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
WTC11_00033925	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	396.479507667168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	-75633550	True	NA	-95	True	NA	NA	NA	75647648	75627769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
WTC11_00033930	chr16	-	569	1	FSM	ENSG00000244485.1	ENST00000478088.1	569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATCCTACTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	76235623	76235054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_76235100_76235600
WTC11_00033931	chr16	-	2506	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	163	0	-163	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAAATCCACGGGCAGA	-79600595	True	NA	NA	False	AATAGA	-19	NA	79600737	79594000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_79594554_79598784
WTC11_00033934	chr16	-	2472	3	FSM	ENSG00000103121.9	ENST00000563779.5	2087	3	0	-385	0	385	multi-exon	FALSE	canonical	3	840	junction_1	118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATTCCTGAGCTTAG	-80998935	False	NA	NA	False	NA	NA	NA	80998949	80975415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_80976180_80981805_80981878_80997313
WTC11_00033936	chr16	-	816	5	NIC	ENSG00000103121.9	novel	871	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_2	420.336174983786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-80997738	True	NA	NA	False	AATAAA	-14	NA	81006873	80975801	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81006733
WTC11_00033938	chr16	-	615	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	-3	0	0	multi-exon	FALSE	canonical	3	40	junction_2	400	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTCCTTTCTCTTAG	-80997762	True	NA	NA	False	AATAAA	-15	NA	81006897	80975800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_80976180_80981805_80981878_81006733
WTC11_00033949	chr16	-	887	5	FSM	ENSG00000260643.2	ENST00000638948.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	947.593399090559	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATACTATTTTGGAATGC	-81087745	False	NA	-98	True	NA	NA	NA	81096233	81053586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81054095_81084462_81084595_81087600_81087665_81090600_81090681_81096130
WTC11_00033950	chr16	-	1552	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	8	0	-8	multi-exon	FALSE	canonical	3	2111	junction_3	104.972317779498	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGATAATGGACTCTG	-81087907	True	NA	NA	False	AATAAA	-26	NA	81096395	81081952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
WTC11_00033951	chr16	-	983	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	-8	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1042.37325368603	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATGTTTGTTTTGAT	-81087777	False	NA	-11	True	AATAAA	-12	NA	81096265	81082327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
WTC11_00033952	chr16	-	2412	3	FSM	ENSG00000140905.11	ENST00000639689.1	2412	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1122.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACTGCATTTGCTGGT	-81087800	True	NA	-88	True	NA	NA	NA	81096288	81082404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81084595_81087600_81087665_81096130
WTC11_00033953	chr16	-	647	3	FSM	ENSG00000140905.11	ENST00000569885.6	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1073	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAATACTTAATGATC	-81087752	False	NA	NA	False	NA	NA	NA	81096240	81082506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81090600_81090681_81096130
WTC11_00033955	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	-81087769	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81096130
WTC11_00033958	chr16	-	1105	6	NNC	ENSG00000135698.10	novel	1101	5	NA	NA	0	57495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	331.710355581492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTAGTTTAGGTAAGAT	-82160557	True	NA	NA	False	NA	NA	NA	82170197	82090302	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_82090337_82148164_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
WTC11_00033961	chr16	-	723	7	FSM	ENSG00000135698.10	ENST00000563100.5	723	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	407.439975129262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGTCTCCTCTCTCCT	-82160553	True	NA	NA	False	NA	NA	NA	82170193	82147797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82147858_82148658_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82164651_82164742_82170124
WTC11_00033962	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_3	22.4874965258474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-82160584	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
WTC11_00033964	chr16	-	619	3	FSM	ENSG00000135698.10	ENST00000569599.5	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	24	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGGAAAAATGTTACT	-82160559	True	NA	NA	False	NA	NA	NA	82170199	82151083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82151515_82164081_82164195_82170124
WTC11_00033974	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	101.250514401985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-84142133	True	NA	-45	True	NA	NA	NA	84145169	84124122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
WTC11_00033975	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	-84142156	True	NA	-1	True	AATAAA	-30	NA	84145192	84130960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84131328_84135543_84135606_84145079
WTC11_00033976	chr16	-	3884	14	FSM	ENSG00000103168.17	ENST00000567759.5	3879	14	0	-5	0	2	multi-exon	FALSE	canonical	0	0	junction_8	89.4677886565919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAACTATGATGCTTT	-84182633	True	NA	-4	True	ATTAAA	-22	NA	84187011	84177849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
WTC11_00033979	chr16	-	3814	14	FSM	ENSG00000103168.17	ENST00000564208.5	3810	14	0	-4	0	2	multi-exon	FALSE	canonical	0	0	junction_8	101.170545565104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAACTATGATGCTTT	-84182674	True	NA	-4	True	ATTAAA	-22	NA	84187052	84177849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
WTC11_00033980	chr16	-	6351	15	FSM	ENSG00000103168.17	ENST00000566732.6	3847	15	0	-2504	0	2496	multi-exon	FALSE	canonical	0	0	junction_9	86.2760164843519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCAGACAGACATTCAT	-84182679	True	NA	NA	False	NA	NA	NA	84187057	84175350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
WTC11_00033994	chr16	-	1866	5	NNC	ENSG00000103187.8	novel	1842	4	NA	NA	0	28821	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.889855337328	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAAGACAAATGAAGCAC	-84599485	True	NA	NA	False	AAAACA	-1	NA	84618075	84536774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84536807_84565600_84566956_84590104_84590263_84617500_84617584_84617837
WTC11_00033995	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	79.4243175747971	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-84599488	True	NA	-2	True	AATAAA	-24	NA	84618078	84565595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
WTC11_00033997	chr16	-	3766	5	FSM	ENSG00000153786.13	ENST00000566909.1	582	5	-959	-2225	-959	-96	multi-exon	FALSE	canonical	3	184	junction_4	22.9932055181525	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTGTTGAATGTTTA	-84983041	False	NA	NA	False	NA	NA	NA	84983076	84974270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869
WTC11_00033998	chr16	-	3356	8	FSM	ENSG00000153786.13	ENST00000313732.9	3448	8	-1	93	-1	-93	multi-exon	FALSE	canonical	3	184	junction_4	19.1289928471663	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTTGAATGTTTAATT	-85006970	True	NA	NA	False	NA	NA	NA	85011536	84974267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84990303_84990636_84995921_84996008_85011285
WTC11_00033999	chr16	-	591	2	FSM	ENSG00000153786.13	ENST00000564526.1	603	2	12	0	12	0	multi-exon	FALSE	canonical	3	209	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCAGAGCTGGGGCT	-84977255	False	NA	NA	False	NA	NA	NA	84977269	84976103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84976520_84977094
WTC11_00034000	chr16	-	560	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	41	0	41	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	-85583500	False	NA	NA	False	NA	NA	NA	85583530	85580008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85580230_85582018_85582170_85583342
WTC11_00034001	chr16	-	1183	6	NNC	ENSG00000131153.9	novel	2628	5	NA	NA	0	49154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.582569342844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAGAAGAAAAGGAAGCAA	-85677421	True	NA	NA	False	AAAAAG	-1	NA	85688954	85627043	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_85627075_85677673_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
WTC11_00034002	chr16	-	2656	6	NNC	ENSG00000131153.9	novel	2628	5	NA	NA	0	49154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.582569342844	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAGAAGAAAAGGAAGCAA	-85677421	True	NA	NA	False	AAAAAG	-1	NA	85688954	85627043	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_85627077_85676202_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
WTC11_00034003	chr16	-	1182	6	NNC	ENSG00000131153.9	novel	2628	5	NA	NA	0	49154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.582569342844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAGAAGAAAAGGAAGCAA	-85677421	True	NA	NA	False	AAAAAG	-1	NA	85688954	85627043	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_85627074_85677673_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
WTC11_00034004	chr16	-	2631	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	-3	0	3	multi-exon	FALSE	canonical	3	950	junction_4	34.4310906013736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGATTTTATTTTTTGG	-85677421	True	NA	3	True	CATAAA	-26	NA	85688954	85676194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
WTC11_00034006	chr16	-	948	1	FSM	ENSG00000275393.1	ENST00000614011.1	534	1	-427	13	-427	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACGATAAAAAAGCTTCGT	NA	False	NA	NA	False	ATTAAA	-3	NA	85698295	85697347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85697300_85698300
WTC11_00034007	chr16	-	1235	2	FSM	ENSG00000154102.11	ENST00000602583.5	1237	2	0	2	0	-2	multi-exon	FALSE	canonical	3	97	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGAATCCTTTTTTTT	NA	False	NA	85	True	AATAAA	-15	NA	85710850	85707518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85708067_85710163
WTC11_00034008	chr16	-	751	4	FSM	ENSG00000154102.11	ENST00000602675.5	744	4	0	-7	0	7	multi-exon	FALSE	canonical	3	26	junction_2	31.5629881700422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTTTTTTTTTTGA	-85750330	False	NA	94	True	AATAAA	-24	NA	85750951	85707509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85708067_85710163_85710286_85735189_85735236_85750925
WTC11_00034009	chr16	-	1041	4	NIC	ENSG00000154102.11	novel	832	5	NA	NA	34	-2	intron_retention	FALSE	canonical	2	4	junction_2	41.8807831827438	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGAATCCTTTTTTTT	-85750441	True	NA	85	True	AATAAA	-15	NA	85751062	85707518	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_85708067_85710163_85710474_85735189_85735236_85750925
WTC11_00034012	chr16	-	831	5	FSM	ENSG00000154102.11	ENST00000602766.1	832	5	1	0	1	0	multi-exon	FALSE	canonical	2	4	junction_3	44.1163235095582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCATAAGCACCAACAAG	-85750490	True	NA	-50	True	NA	NA	NA	85751111	85707653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85708067_85710163_85710286_85710409_85710474_85735189_85735236_85750925
WTC11_00034013	chr16	-	1982	5	FSM	ENSG00000131148.9	ENST00000253457.8	1966	5	0	-16	0	16	multi-exon	FALSE	canonical	3	659	junction_3	15.0582203463756	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAATACCTCTTACTCT	-85791658	True	NA	16	True	AATAAA	-40	NA	85799544	85778607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85779868_85780378_85780474_85781210_85781281_85788973_85789051_85799064
WTC11_00034014	chr16	-	1951	4	FSM	ENSG00000131148.9	ENST00000435200.2	1935	4	0	-16	0	16	multi-exon	FALSE	canonical	3	4	junction_1	312.609447500658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAATACCTCTTACTCT	NA	False	NA	16	True	AATAAA	-40	NA	85799608	85778607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85779868_85781210_85781281_85788973_85789051_85799064
WTC11_00034015	chr16	-	1826	1	FSM	ENSG00000131148.9	ENST00000597291.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCTGGAGAGAATACT	-85781213	False	NA	-24	True	ATTAAA	-19	NA	85781223	85779397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85779400_85781200
WTC11_00034016	chr16	-	314	3	FSM	ENSG00000131148.9	ENST00000600807.1	851	3	537	0	0	0	multi-exon	FALSE	canonical	3	689	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAACCTATTTTTAAA	-85781213	False	NA	-65	True	NA	NA	NA	85781223	85779661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85779868_85780378_85780474_85781210
WTC11_00034017	chr16	-	3465	3	FSM	ENSG00000103248.19	ENST00000562096.1	691	3	-558	-2216	-558	32	multi-exon	FALSE	canonical	3	49	junction_2	3	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGGGGACAGTTCCC	NA	False	NA	31	True	NA	NA	NA	86543103	86530145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100
WTC11_00034018	chr16	-	3004	8	FSM	ENSG00000103248.19	ENST00000360900.11	3028	8	24	0	-8	0	multi-exon	FALSE	canonical	3	31	junction_5	8.92371296385224	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-86554538	True	NA	-9	True	AATAAA	-15	NA	86555211	86530185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554752_86555168
WTC11_00034019	chr16	-	458	1	FSM	ENSG00000103248.19	ENST00000625049.1	3623	1	-94	3259	-94	-1075	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAATAAAAAGCATC	NA	False	NA	NA	False	NA	NA	NA	86533894	86533436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86533400_86533900
WTC11_00034020	chr16	-	845	6	FSM	ENSG00000103248.19	ENST00000568037.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.61034021896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGACCATGTCTTATG	-86554505	True	NA	-9	True	AATAAA	-15	NA	86555178	86547145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86547569_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554752_86555168
WTC11_00034024	chr16	-	961	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	13	0	0	multi-exon	FALSE	canonical	3	22	junction_4	17.8675683852056	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87316759	True	NA	-1	True	AATAAA	-22	NA	87317420	87302813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
WTC11_00034025	chr16	-	3602	10	NNC	ENSG00000103264.18	novel	5953	9	NA	NA	0	17614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.704266871026	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAAGAAAA	-87382435	True	NA	NA	False	NA	NA	NA	87383748	87309372	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_87309399_87329335_87331511_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
WTC11_00034026	chr16	-	5954	9	FSM	ENSG00000103264.18	ENST00000311635.12	5953	9	0	-1	0	1	multi-exon	FALSE	canonical	3	59	junction_4	6.42261628933256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTTTGTGATTTC	-87382463	True	NA	0	True	AGTAAA	-18	NA	87383776	87326985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87331511_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
WTC11_00034027	chr16	-	660	5	FSM	ENSG00000103264.18	ENST00000636077.1	660	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	30.6022874961987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTCAGGATCCACCTGA	-87382435	True	NA	NA	False	NA	NA	NA	87383748	87343685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87343766_87347173_87347251_87358410_87358498_87360294_87360367_87383404
WTC11_00034028	chr16	-	305	4	FSM	ENSG00000103264.18	ENST00000561664.1	305	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.6627904356076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGGATGTACCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	87367508	87343745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87343766_87347173_87347251_87360294_87360367_87367372
WTC11_00034031	chr16	-	6253	14	FSM	ENSG00000140948.13	ENST00000568020.6	6242	14	0	-11	0	0	multi-exon	FALSE	canonical	3	16	junction_13	4.06456763496089	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTCACTAGGTCTTT	-87490089	False	NA	-9	True	AATAAA	-18	NA	87491859	87406245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87407015_87407677_87410336_87411515_87412977_87413054_87413196_87414413_87414542_87415275_87415368_87417459_87417743_87418846_87418902_87419782_87419878_87420606_87420717_87423809_87423882_87433127_87433202_87460007_87460132_87491668
WTC11_00034035	chr16	-	4444	1	FSM	ENSG00000104731.14	ENST00000446344.3	4444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCTCTAATCTTTAGT	-87702576	False	NA	-7	True	AATAAA	-16	NA	87702591	87698147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87698100_87702600
WTC11_00034037	chr16	-	1668	10	FSM	ENSG00000104731.14	ENST00000353170.9	1663	10	0	-5	0	5	multi-exon	FALSE	canonical	2	4	junction_9	56.239566933689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGAGGGTGTCTTCTGTGT	-87761684	True	NA	NA	False	AATAAA	-23	NA	87765899	87707806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87765791
WTC11_00034038	chr16	-	1826	11	FSM	ENSG00000104731.14	ENST00000347925.9	1821	11	0	-5	0	5	multi-exon	FALSE	canonical	3	29	junction_6	43.952246814014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGAGGGTGTCTTCTGTGT	-87761761	True	NA	NA	False	AATAAA	-23	NA	87765976	87707806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
WTC11_00034039	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	23.5887632585118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761771	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
WTC11_00034046	chr16	-	4581	11	NNC	ENSG00000103257.9	novel	4556	10	NA	NA	0	40805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	340.988108297049	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAAAATTGG	-87856343	True	NA	NA	False	NA	NA	NA	87869507	87789217	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_87789245_87830024_87833026_87834413_87834592_87836497_87836648_87837844_87837942_87838713_87838818_87839701_87839826_87840428_87840474_87841049_87841156_87851723_87851850_87868884
WTC11_00034048	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	101.39625239623	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-88638469	True	NA	-7	True	AATAAA	-17	NA	88651053	88643288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
WTC11_00034049	chr16	-	221	3	FSM	ENSG00000051523.11	ENST00000565588.5	221	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1248.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCGGAGGCACCATCAAG	-88646813	False	313	NA	False	NA	NA	NA	88646825	88643513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88643582_88646115_88646198_88646754
WTC11_00034050	chr16	-	1006	5	FSM	ENSG00000051523.11	ENST00000566534.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	111.137302468613	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCGGAGGCACCATCAAG	-88638451	True	NA	NA	False	NA	NA	NA	88651035	88643513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88643572_88646115_88646839_88647100_88647176_88648044_88648115_88650955
WTC11_00034051	chr16	-	1415	5	FSM	ENSG00000051523.11	ENST00000569359.5	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	2459	junction_2	92.9865581683718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCACCCTGCCGGGCTCA	-88638446	True	NA	NA	False	NA	NA	NA	88651030	88645086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
WTC11_00034053	chr16	-	624	4	FSM	ENSG00000051523.11	ENST00000562209.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	3	2504	junction_1	75.8463358816144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCGAGCGGCATCTACC	-88638447	True	NA	NA	False	NA	NA	NA	88651031	88646140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88646198_88646754_88647176_88648044_88648115_88650955
WTC11_00034054	chr16	-	2354	6	FSM	ENSG00000167508.12	ENST00000565149.5	2352	6	0	-2	0	2	multi-exon	FALSE	canonical	3	565	junction_4	67.942917217323	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCGTTTTTCTGTTTCG	-88649241	False	NA	-2	True	AATAAA	-22	NA	88657266	88651932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104
WTC11_00034056	chr16	-	537	2	FSM	ENSG00000167508.12	ENST00000562981.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGAGGTCCCCGCCGA	-88645559	False	NA	NA	False	NA	NA	NA	88653584	88652353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88652606_88653299
WTC11_00034058	chr16	-	870	8	FSM	ENSG00000167508.12	ENST00000569177.5	870	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	281.790702472598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGATGGCCCGCTGCAT	-88655112	True	NA	NA	False	NA	NA	NA	88663137	88655384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
WTC11_00034060	chr16	-	758	7	FSM	ENSG00000167508.12	ENST00000567064.5	758	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	314.182360350729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGCCAGGAGCGGGTG	-88655066	True	NA	NA	False	NA	NA	NA	88663091	88655656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88662711_88662782_88663010
WTC11_00034061	chr16	-	888	5	FSM	ENSG00000167508.12	ENST00000563785.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_2	45.3045251602972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCCTGCATTGGCTG	-88655069	True	NA	NA	False	NA	NA	NA	88663094	88655833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
WTC11_00034068	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-88685534	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88678630_88681093_88681715_88686330
WTC11_00034069	chr16	-	6539	4	ISM	ENSG00000158717.11	ENST00000541206.6	2419	6	-1185	-35	-1185	0	intron_retention	FALSE	canonical	3	212	junction_3	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGCAGCCTCGACTGG	-88702496	False	NA	-11	True	AATAAA	-14	NA	88704802	88696500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_88697634_88698501_88698610_88698970_88699086_88699619
WTC11_00034070	chr16	-	1868	6	FSM	ENSG00000158717.11	ENST00000312838.9	1864	6	0	-4	0	2	multi-exon	FALSE	canonical	3	174	junction_4	23.5847408296127	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGCCTCGACTGGCTTT	-88704102	True	NA	-7	True	AATAAA	-18	NA	88706408	88696496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88697634_88698501_88698610_88698970_88699086_88699619_88699733_88701261_88701419_88706170
WTC11_00034071	chr16	-	588	2	FSM	ENSG00000158717.11	ENST00000565083.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGGAGCTGCCGCCG	-88695877	False	NA	NA	False	NA	NA	NA	88698183	88697295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88697634_88697933
WTC11_00034076	chr16	-	8089	51	FSM	ENSG00000103335.22	ENST00000301015.14	8089	51	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_22	32.1174407448663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTCCCCCGTCCTTGC	-88783393	True	NA	3	True	ATTAAA	-33	NA	88785220	88715337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022_88717212_88719573_88719722_88719801_88719961_88720068_88720284_88720384_88720533_88720615_88720749_88721165_88721431_88721537_88721727_88721807_88722067_88722217_88722398_88722582_88722690_88722836_88723010_88723094_88723152_88723225_88723329_88723870_88723972_88725008_88725081_88725415_88725520_88725594_88725685_88726283_88726456_88726546_88726644_88726714_88726959_88727038_88727193_88727556_88727662_88731705_88731911_88732334_88732536_88732606_88732733_88733277_88733455_88733587_88733746_88733905_88734055_88734355_88734539_88734649_88734799_88734874_88735054_88735134_88735247_88736147_88736409_88736638_88736740_88737558_88737647_88737727_88737815_88737933_88738106_88738226_88738441_88738567_88738737_88741477_88741617_88742052_88742096_88742299_88742423_88749383_88749480_88784900
WTC11_00034080	chr16	-	6844	44	NIC	ENSG00000103335.22	novel	8089	51	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_15	21.8570506982174	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCATGTGTGGGTCCGC	-88783393	True	NA	NA	False	NA	NA	NA	88785220	88717022	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_88717212_88719573_88719722_88719801_88719961_88720068_88720284_88720384_88720533_88720615_88720749_88721165_88721431_88721537_88721727_88721807_88722067_88722217_88722398_88722582_88722690_88722836_88723010_88723094_88723152_88723225_88723329_88723870_88723972_88725415_88725520_88725594_88725685_88726283_88726456_88726546_88726644_88726714_88726959_88727038_88727193_88727556_88727662_88731705_88731911_88732334_88732536_88732606_88732733_88733277_88733455_88733587_88733746_88733905_88734055_88734355_88734539_88734649_88734799_88734874_88735054_88735134_88735247_88736147_88736409_88736638_88736740_88737558_88737647_88737727_88737815_88737933_88738106_88738226_88738441_88738567_88738737_88741477_88741617_88742052_88742096_88742299_88742423_88749383_88749480_88784900
WTC11_00034087	chr16	-	938	5	FSM	ENSG00000198931.11	ENST00000378364.8	931	5	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_3	2247.58886086846	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGGCACTGCAGGAAG	-88783155	True	NA	NA	False	NA	NA	NA	88811928	88809331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809841_88810069_88810149_88810422_88810557_88811549_88811657_88811819
WTC11_00034088	chr16	-	437	2	FSM	ENSG00000198931.11	ENST00000567057.5	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88810257	False	NA	-4	True	AGTAAA	-15	NA	88810268	88809468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809707_88810069
WTC11_00034089	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2364.25611979751	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783152	True	NA	-4	True	AGTAAA	-15	NA	88811925	88809468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
WTC11_00034090	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2321.37473637211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783155	True	NA	-4	True	AGTAAA	-15	NA	88811928	88809468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
WTC11_00034097	chr16	-	1860	8	FSM	ENSG00000259803.8	ENST00000614943.4	1860	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_6	12.1352917609116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCGTCCTCCCTGGTTC	-89199092	False	NA	-5	True	GATAAA	-14	NA	89200121	89195760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651_89198798_89199022_89199192_89199412_89199568_89199712
WTC11_00034099	chr16	-	780	5	FSM	ENSG00000259803.8	ENST00000563595.6	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	11.0679718105893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGAAGCCGGGGGCTG	-89197811	False	NA	NA	False	NA	NA	NA	89198840	89196150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651
WTC11_00034106	chr16	-	9329	13	FSM	ENSG00000167522.17	ENST00000642600.1	8724	13	-184	-421	-102	0	multi-exon	FALSE	canonical	3	31	junction_5	44.9060748179526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTAAATAACTTATGTA	-89490612	False	NA	-81	True	NA	NA	NA	89490663	89267700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89268664_89270816_89270910_89274813_89274958_89275092_89275192_89279071_89285650_89286038_89286187_89288527_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317076_89418283_89418369_89490244
WTC11_00034113	chr16	-	2817	7	FSM	ENSG00000167522.17	ENST00000642695.1	2801	7	0	-16	0	0	multi-exon	FALSE	canonical	3	89	junction_5	27.2483434766634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTCCTCTATTCT	-89490251	False	NA	-1	True	AATAAA	-26	NA	89490302	89286656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
WTC11_00034122	chr16	-	2358	8	NNC	ENSG00000131165.16	novel	2444	8	NA	NA	0	13164	intron_retention	FALSE	non_canonical	0	0	junction_1	153.648817709976	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATATCCAAGACTGG	-89650020	True	NA	NA	False	NA	NA	NA	89657697	89627651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89627679_89644434_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
WTC11_00034123	chr16	-	2357	4	NNC	ENSG00000158792.16	novel	1001	4	NA	NA	0	68705	intron_retention	FALSE	non_canonical	0	0	junction_1	33.1762967593833	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATATCCAAGACTGG	-89700280	True	NA	NA	False	NA	NA	NA	89701705	89627651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89627679_89696357_89698306_89700929_89701234_89701627
WTC11_00034124	chr16	-	2803	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	-6	0	6	multi-exon	FALSE	canonical	3	404	junction_3	22.068982758614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTTGCTTTGGAGCCT	-89649998	True	NA	-1	True	AATAAA	-25	NA	89657675	89644428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
WTC11_00034125	chr16	-	2342	7	FSM	ENSG00000131165.16	ENST00000397901.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_4	20.169421299471	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89650031	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
WTC11_00034126	chr16	-	2336	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	22	192	-3	6	multi-exon	FALSE	canonical	3	37	junction_5	156.236999459155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTTGCTTTGGAGCCT	-89650039	True	NA	-1	True	AATAAA	-25	NA	89657716	89644428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
WTC11_00034131	chr16	-	775	6	FSM	ENSG00000075399.14	ENST00000565023.1	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	7.57363849150459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTGAGGACCATCCTG	-89710630	False	NA	NA	False	NA	NA	NA	89710642	89707783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709910_89710585
WTC11_00034132	chr16	-	694	5	FSM	ENSG00000075399.14	ENST00000567379.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.92028643696715	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGACCAGCCTGGTCTC	-89713019	False	NA	NA	False	NA	NA	NA	89713040	89711358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89711413_89711881_89711970_89712046_89712100_89712459_89712523_89712604
WTC11_00034135	chr16	-	747	4	FSM	ENSG00000187741.15	ENST00000562424.1	745	4	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.5148270855621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAGTGGGGAAAGGAATC	-89739745	False	NA	-31	True	AAAAAG	-24	NA	89739758	89738492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477
WTC11_00034149	chr16	-	1937	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	-11	-232	0	201	multi-exon	FALSE	canonical	3	131	junction_2	23.5801758127039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCCCTCTGGTGTCTT	-89811717	True	NA	NA	False	NA	NA	NA	89816646	89798152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
WTC11_00034150	chr16	-	1660	11	FSM	ENSG00000187741.15	ENST00000389302.7	1641	11	1	-20	-1	0	multi-exon	FALSE	canonical	3	101	junction_1	29.9848294975976	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACATGTGCATCAGTT	-89811727	True	NA	2	True	AATAAA	-21	NA	89816656	89798353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89799080_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
WTC11_00034153	chr16	-	2764	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAAGAATCGCCAGGAA	-89972166	True	NA	3	True	ATTAAA	-37	NA	89972534	89969770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89969800_89972500
WTC11_00034155	chr16	-	2074	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	-1	0	1	multi-exon	FALSE	canonical	3	44	junction_3	332.129827360058	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCACAGTCTCTTCC	-90019099	True	NA	-6	True	ATTAAA	-21	NA	90019890	90004869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
WTC11_00034159	chr16	+	565	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGACAGGTGCCCTCT	2152028	False	NA	NA	False	NA	NA	NA	2152151	2152716	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_2152200_2152700
WTC11_00034161	chr16	+	3693	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTTTCTGGCATCTC	NA	False	NA	NA	False	NA	NA	NA	21432648	21436341	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_21432600_21436300
WTC11_00034162	chr16	+	823	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGTGGTGGCTCAC	NA	False	NA	NA	False	ATTAAA	-22	NA	21842025	21842848	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_21842000_21842800
WTC11_00034163	chr16	+	418	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAATTTTTGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	22528576	22528994	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_22528600_22529000
WTC11_00034164	chr16	+	635	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTCCTCCTGCGTTCC	24781033	False	NA	NA	False	NA	NA	NA	24781043	24781678	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_24781000_24781700
WTC11_00034165	chr16	+	420	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTAAGCTGTGAGCTTC	NA	False	NA	NA	False	NA	NA	NA	28653846	28654266	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_28653800_28654300
WTC11_00034166	chr16	+	1324	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCAGCTACTCAGAAGG	29728840	False	NA	NA	False	AATACA	-34	NA	29728859	29730183	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_29728900_29730200
WTC11_00034167	chr16	+	1035	1	FSM	ENSG00000288983.1	ENST00000689900.1	1045	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGTAACTTTACTAAA	30634430	True	NA	NA	False	CATAAA	-19	NA	30634537	30635572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30634500_30635600
WTC11_00034169	chr16	+	275	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTAGTGACATATGC	NA	False	NA	NA	False	NA	NA	NA	35802451	35802726	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_35802500_35802700
WTC11_00034173	chr16	+	831	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTAAAAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	65275625	65276456	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_65275600_65276500
WTC11_00034177	chr16	+	382	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATACAAAAT	NA	False	NA	NA	False	NA	NA	NA	72747212	72747594	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_72747200_72747600
WTC11_00034178	chr16	+	283	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGTTCTCTCTCCATACC	86280265	False	NA	NA	False	NA	NA	NA	86280458	86280741	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_86280500_86280700
WTC11_00034180	chr16	+	4230	10	Fusion	ENSG00000242173.10_ENSG00000185615.16	novel	1956	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_5	8.62525719781127	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGACTCTGTGTGCCTG	280559	True	NA	13	True	AATAAA	-13	NA	280590	287208	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_284594_284658_285704_286352_286474_286553_286736_286834_286946_287068
WTC11_00034181	chr16	+	953	3	FSM	ENSG00000236829.9	ENST00000412293.5	1715	3	28	734	-25	-734	multi-exon	TRUE	canonical	2	3	junction_2	19	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCCACGCTGAGGTTA	381760	True	NA	NA	False	NA	NA	NA	382124	392226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_382478_383289_383430_391766
WTC11_00034182	chr16	+	1044	3	FSM	ENSG00000236829.9	ENST00000457760.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCTAATTCTAAATAT	381785	True	NA	NA	False	NA	NA	NA	382149	387242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_382478_383289_383430_386666
WTC11_00034183	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	115	junction_2	1075.57560816936	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	370275	True	NA	13	True	AGTAAA	-20	NA	397191	400753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399626_399740_400218
WTC11_00034184	chr16	+	1861	2	FSM	ENSG00000103202.13	ENST00000468031.1	1861	2	0	0	0	0	multi-exon	FALSE	canonical	3	2556	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTTCCATAACGTTGT	371493	False	NA	9	True	AGTAAA	-16	NA	398409	400749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_399740_400218
WTC11_00034186	chr16	+	4625	13	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	48.0760393081164	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	527800	False	NA	17	True	AATAAA	-18	NA	527856	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553342
WTC11_00034187	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	566973	True	NA	4	True	AATAAA	-16	NA	567004	569495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_567076_567495
WTC11_00034189	chr16	+	2494	7	NIC	ENSG00000197562.10	novel	2569	7	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	76.7608117610947	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	588776	True	NA	27	True	AGTAAA	-19	NA	590091	629268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625955_626122_627341
WTC11_00034191	chr16	+	466	3	FSM	ENSG00000161996.19	ENST00000548859.1	512	3	-12	58	0	-58	multi-exon	FALSE	canonical	3	43	junction_1	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATGCCGGTTTCCTGGT	656408	False	NA	NA	False	NA	NA	NA	656420	657299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_656538_656731_656872_657090
WTC11_00034192	chr16	+	3133	22	FSM	ENSG00000161996.19	ENST00000552728.5	3133	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	26.9823155321022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTGCATTGTTGCAC	656408	False	NA	32	True	AATAAA	-18	NA	656420	667830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00034193	chr16	+	3150	16	NIC	ENSG00000161996.19	novel	3847	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_9	27.9666468017411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	659232	False	NA	31	True	AATAAA	-17	NA	659244	667829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_663554_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00034194	chr16	+	2133	12	FSM	ENSG00000161996.19	ENST00000549024.5	2257	12	124	0	124	0	multi-exon	FALSE	canonical	3	35	junction_4	25.2422969184464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	661178	False	NA	31	True	AATAAA	-17	NA	661188	667829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00034195	chr16	+	3205	6	FSM	ENSG00000161996.19	ENST00000553080.1	1941	6	-1264	0	584	0	multi-exon	FALSE	canonical	3	75	junction_1	12.1424873893284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	663713	False	NA	31	True	AATAAA	-17	NA	663723	667829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_665802_665949_666125_666219_666351_666454_666793_666904_666990_667431
WTC11_00034197	chr16	+	1487	7	ISM	ENSG00000103269.14	ENST00000352681.8	1458	8	51	1	0	0	intron_retention	FALSE	canonical	3	10	junction_1	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGGGCTGTCCCGGGC	675682	False	NA	8	True	AATAAA	-14	NA	675721	678267	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638
WTC11_00034198	chr16	+	1560	7	FSM	ENSG00000103269.14	ENST00000219551.2	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.71558280160133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	676043	False	NA	9	True	AATAAA	-15	NA	676074	678268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
WTC11_00034199	chr16	+	1309	9	NNC	ENSG00000103253.19	novel	1512	8	NA	NA	-405	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	103.748418662648	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726384	True	NA	9	True	AATAAA	-14	NA	726530	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_726634_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
WTC11_00034200	chr16	+	1667	6	FSM	ENSG00000103253.19	ENST00000564537.5	1667	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	96.8677448896174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726874	True	NA	9	True	AATAAA	-14	NA	727105	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727176_727411_727615_727964_728030_728115_728234_728315_728605_728793
WTC11_00034203	chr16	+	2854	20	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	138.806148330701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCACGTGCGAGTGGAGT	776833	True	NA	20	True	TATAAA	-20	NA	788632	798071	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00034204	chr16	+	4048	20	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	261	junction_7	97.7118268585397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCACGTGCGAGTGGAGT	776835	True	NA	20	True	TATAAA	-20	NA	788634	798071	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
WTC11_00034206	chr16	+	1362	1	FSM	ENSG00000162009.9	ENST00000293897.6	2629	1	-45	1312	-45	-1312	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTAACCGTCTGCCAC	1078744	False	NA	NA	False	NA	NA	NA	1078780	1080142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1078800_1080100
WTC11_00034209	chr16	+	542	4	FSM	ENSG00000007516.14	ENST00000565665.5	564	4	13	9	6	-9	multi-exon	FALSE	canonical	2	8	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGGCTCCTGGTGCAAA	1332992	True	NA	NA	False	NA	NA	NA	1333650	1339377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163
WTC11_00034210	chr16	+	4525	34	FSM	ENSG00000007516.14	ENST00000426824.8	4531	34	6	0	6	0	multi-exon	FALSE	canonical	2	8	junction_1	6.6217495101249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGCCGTTTCTTGA	1332992	True	NA	9	True	AATATA	-18	NA	1333650	1349439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
WTC11_00034211	chr16	+	1258	11	FSM	ENSG00000090581.11	ENST00000683887.1	1237	11	-21	0	3	0	multi-exon	FALSE	canonical	0	0	junction_3	108.492211702039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGGGTTAAGAAAATT	1347973	True	NA	4	True	AGTAAA	-16	NA	1351933	1363351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361694_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
WTC11_00034218	chr16	+	642	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	-14	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1138.434402541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
WTC11_00034219	chr16	+	2692	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	-65	-33	-32	0	multi-exon	FALSE	canonical	3	496	junction_9	35.0341262200158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGGAAAACCCATAAAGG	1972003	False	NA	-17	True	NA	NA	NA	1972020	1978717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
WTC11_00034221	chr16	+	5466	39	FSM	ENSG00000103197.18	ENST00000644329.1	5453	39	-13	0	0	0	multi-exon	FALSE	canonical	3	67	junction_25	38.9121818295613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAGAGGCACAGATTGC	2043190	True	NA	9	True	AATAAA	-24	NA	2048019	2088691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088326_2088445
WTC11_00034222	chr16	+	1855	7	FSM	ENSG00000103197.18	ENST00000642791.1	1855	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	25.6904651573303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGGACTCGGGGAA	NA	False	NA	NA	False	NA	NA	NA	2085063	2089444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
WTC11_00034223	chr16	+	1843	9	FSM	ENSG00000167965.18	ENST00000382450.8	1861	9	18	0	-3	0	multi-exon	FALSE	canonical	3	19	junction_2	212.896688560438	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	2205167	False	NA	7	True	AATAAA	-16	NA	2205221	2209396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206030_2206215_2206360_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00034226	chr16	+	2137	8	FSM	ENSG00000167965.18	ENST00000568194.5	2116	8	-21	0	0	0	multi-exon	FALSE	canonical	3	519	junction_5	60.9810944272979	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2205438	False	NA	8	True	AATAAA	-17	NA	2205449	2209397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00034228	chr16	+	1662	2	FSM	ENSG00000167965.18	ENST00000562392.1	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGATGTTGCTCGGGAA	2207572	False	NA	3	True	AATAAA	-12	NA	2207585	2209392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2208614_2208758
WTC11_00034230	chr16	+	648	2	ISM	ENSG00000260778.5	ENST00000562838.1	535	3	3013	-294	3013	0	3prime_fragment	FALSE	canonical	3	48	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	2271658	False	NA	4	True	AATAAA	-13	NA	2271675	2273418	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2271892_2272986
WTC11_00034231	chr16	+	234	1	FSM	ENSG00000162063.13	ENST00000564333.1	1937	1	1103	600	1103	-600	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGGGCGAGGGGCA	2432369	False	NA	NA	False	NA	NA	NA	2437088	2437322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2437100_2437300
WTC11_00034235	chr16	+	2080	3	FSM	ENSG00000260272.1	ENST00000564543.1	1944	3	2	-138	2	138	multi-exon	FALSE	canonical	1	4	junction_1	766	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACGTGGGCGCGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	2496033	2520356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2497114_2519217_2519402_2519540
WTC11_00034238	chr16	+	2418	12	NIC	ENSG00000162066.16	novel	3172	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_11	51.9651822405085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2517601	True	NA	26	True	AATACA	-22	NA	2520393	2531417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474_2529526_2530256
WTC11_00034243	chr16	+	3198	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	52	0	52	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	2777069	True	NA	4	True	AATAAA	-15	NA	2777370	2780568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2777400_2780600
WTC11_00034245	chr16	+	1978	9	FSM	ENSG00000131650.14	ENST00000571007.5	1877	9	-59	-42	0	38	multi-exon	FALSE	canonical	0	0	junction_4	12.7273082385868	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCATACAAACGCCGAGG	2964173	False	NA	45	True	NA	NA	NA	2964215	2968421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966758_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
WTC11_00034247	chr16	+	830	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	-12	0	-3	0	multi-exon	FALSE	canonical	2	10	junction_1	4.14996653266291	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	3065478	True	NA	2	True	AATAAA	-17	NA	3065627	3069530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
WTC11_00034249	chr16	+	2046	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	16	0	-3	0	multi-exon	FALSE	canonical	2	12	junction_1	17.8457900419741	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111336	True	NA	12	True	ATTAAA	-16	NA	3112575	3120517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
WTC11_00034253	chr16	+	3538	2	FSM	ENSG00000006194.10	ENST00000575332.1	2637	2	-901	0	-901	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAACTTGAATGTCTCT	3287367	False	NA	NA	False	AATATA	-18	NA	3289310	3301400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3290554_3299105
WTC11_00034260	chr16	+	376	4	FSM	ENSG00000267795.6	ENST00000586005.6	628	4	40	212	31	0	multi-exon	FALSE	canonical	1	2	junction_1	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGAGTCTGCAGTGTC	4795355	True	NA	NA	False	NA	NA	NA	4795408	4796279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4795450_4795714_4795859_4795947_4796049_4796189
WTC11_00034266	chr16	+	286	2	FSM	ENSG00000067365.15	ENST00000564624.1	260	2	0	-26	0	26	multi-exon	FALSE	canonical	3	184	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGACATTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	8635167	8639231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8635313_8639090
WTC11_00034267	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.34306599330729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	8673822	True	NA	5	True	AATAAA	-15	NA	8674616	8784570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
WTC11_00034270	chr16	+	2365	4	FSM	ENSG00000140650.13	ENST00000683761.1	2365	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.65685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCCCTTGATGAAAC	NA	False	NA	NA	False	NA	NA	NA	8848765	8856245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8849656_8849848_8849994_8850932_8851051_8855033
WTC11_00034276	chr16	+	578	6	FSM	ENSG00000038532.16	ENST00000463459.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	18.7872297053078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAAGGCAGCGTG	NA	False	NA	NA	False	AATAAA	-20	NA	11024866	11048512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11048318
WTC11_00034277	chr16	+	4351	5	FSM	ENSG00000038532.16	ENST00000261657.5	4351	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	16.1709616287962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGAATGTAGCGTGCTG	11123888	False	NA	5	True	AATAAA	-15	NA	11123899	11182181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11123947_11125978_11126147_11166387_11166553_11174153_11174278_11178334
WTC11_00034279	chr16	+	4500	2	FSM	ENSG00000175643.10	ENST00000572992.1	934	2	-7	-3559	-7	3559	multi-exon	FALSE	canonical	3	5	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATCATCCTGAA	11312388	True	NA	5	True	AATAAA	-18	NA	11312892	11320595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11312938_11316140
WTC11_00034280	chr16	+	1598	3	FSM	ENSG00000175643.10	ENST00000648619.1	1228	3	-42	-328	-22	328	multi-exon	FALSE	canonical	1	4	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGCAGTGGCGCAATCT	11338294	True	NA	NA	False	NA	NA	NA	11345427	11381990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11345767_11379821_11379888_11380797
WTC11_00034285	chr16	+	9113	18	NNC	ENSG00000186260.17	novel	8608	16	NA	NA	3964	0	intron_retention	FALSE	canonical	2	6	junction_1	18.6144639970157	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	14075285	False	NA	7	True	AATAAA	-16	NA	14075307	14266773	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14075502_14079289_14079355_14092720_14092883_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
WTC11_00034287	chr16	+	2929	7	NNC	ENSG00000254852.8	novel	954	7	NA	NA	386	49	intron_retention	FALSE	canonical	3	29	junction_1	78.6739050342191	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	NA	False	AATAAA	-39	NA	14751198	14765462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607
WTC11_00034288	chr16	+	1560	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	396	49	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	81.6593221742575	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	NA	False	AATAAA	-39	NA	14751208	14765462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
WTC11_00034297	chr16	+	3160	9	NIC	ENSG00000072864.16	novel	2550	11	NA	NA	-2	-13	intron_retention	FALSE	canonical	1	1	junction_1	27.4519466522868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATTGGAAAAGGAAGGG	15648470	True	NA	5	True	AATAAA	-7	NA	15650242	15726340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15650295_15651930_15652051_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15724190
WTC11_00034299	chr16	+	6387	30	NIC	ENSG00000103222.20	novel	6504	31	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	45.5281073759565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	15949441	True	NA	15	True	AGTAAA	-19	NA	15949606	16143053	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00034300	chr16	+	6430	29	NIC	ENSG00000103222.20	novel	6504	31	NA	NA	-190	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	52.6867306029958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	15949364	False	NA	15	True	AGTAAA	-19	NA	15949386	16143053	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00034307	chr16	+	470	6	FSM	ENSG00000183889.12	ENST00000527703.2	470	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	131.302094423509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACATTCTATAATTGAT	NA	False	NA	NA	False	TTTAAA	-36	NA	16344369	16350203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16349228_16349299_16350091
WTC11_00034313	chr16	+	423	2	Genic_Genomic	ENSG00000228071.4	novel	556	1	NA	NA	240	5060	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCCGGGATGGT	NA	False	NA	NA	False	AAAACA	-4	NA	17932959	17938335	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_+_17933352_17938304
WTC11_00034318	chr16	+	5308	14	NIC	ENSG00000103540.16	novel	5549	15	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_13	17.7410699263088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTAGTTTGATT	19521062	True	NA	NA	False	AATAAA	-12	NA	19523900	19553400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
WTC11_00034320	chr16	+	2553	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	-20	0	-20	0	multi-exon	FALSE	canonical	2	6	junction_9	6.68655809603099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	20763970	False	NA	NA	False	AATAAA	-17	NA	20763993	20797581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
WTC11_00034321	chr16	+	1541	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	-24	0	2	0	multi-exon	FALSE	canonical	2	18	junction_4	3.57071421427143	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	20763784	True	NA	16	True	TATAAA	-21	NA	20764015	20786314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
WTC11_00034322	chr16	+	2100	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	-504	-739	-470	-2	multi-exon	FALSE	canonical	1	2	junction_1	61.0834470212676	4396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTTGTCTGTCTATT	NA	False	NA	13	True	AATAAA	-13	NA	20899397	20925002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
WTC11_00034323	chr16	+	1602	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	-50	-621	-50	-2	multi-exon	FALSE	canonical	2	8	junction_2	54.1623075169029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTTGTCTGTCTATT	20900384	False	NA	13	True	AATAAA	-13	NA	20900615	20925002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
WTC11_00034325	chr16	+	1000	1	FSM	ENSG00000261596.2	ENST00000564271.2	828	1	-178	6	-178	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATTTTTCAAAATTG	21626518	False	NA	-4	True	AATAAA	-11	NA	21626563	21627563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21626600_21627600
WTC11_00034326	chr16	+	3807	1	FSM	ENSG00000197006.15	ENST00000564733.1	5603	1	1796	0	1796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	NA	False	NA	28	True	AATAAA	-19	NA	21653664	21657471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21653700_21657500
WTC11_00034327	chr16	+	852	2	FSM	ENSG00000185716.12	ENST00000562695.1	695	2	-157	0	15	0	multi-exon	FALSE	canonical	3	24	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACATAAAAATATAAAT	22007549	True	NA	NA	False	AATAAA	-15	NA	22008125	22076056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22008408_22075486
WTC11_00034328	chr16	+	852	5	FSM	ENSG00000237296.10	ENST00000446662.5	852	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.82344135219425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTACATGATGTGCT	22434835	True	NA	NA	False	TATAAA	-45	NA	22437007	22460813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22437493_22451619_22451659_22454701_22454866_22459354_22459492_22460786
WTC11_00034329	chr16	+	7761	38	NNC	ENSG00000237296.10	novel	4223	29	NA	NA	-57	44257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	99.4572708337338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	22437250	False	NA	NA	False	AATAAA	-33	NA	22437343	22536477	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22437493_22451619_22451659_22454701_22454866_22459354_22459492_22460786_22460843_22462120_22462335_22465692_22465819_22466196_22466270_22467190_22467289_22469022_22469196_22471627_22471853_22474124_22474227_22474948_22475219_22478690_22478822_22478975_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491826_22513519_22513611_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625_22534033_22534056
WTC11_00034336	chr16	+	2707	17	FSM	ENSG00000166501.14	ENST00000321728.12	2707	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	26.6000469924397	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	23835046	True	NA	NA	False	ATTAAA	-19	NA	23835982	24220611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24219960
WTC11_00034338	chr16	+	2024	8	ISM	ENSG00000122257.20	ENST00000567686.5	1138	10	1866	1860	-7	0	internal_fragment	FALSE	canonical	3	135	junction_3	11.5068746089156	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	24535035	True	NA	34	True	AATAAA	-36	NA	24539577	24559805	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
WTC11_00034339	chr16	+	6482	13	FSM	ENSG00000122257.20	ENST00000562430.5	6482	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	30.6254251671167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGAGTATTTGCATT	24554460	False	NA	11	True	AATAAA	-20	NA	24554476	24572860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24568744_24570500_24570875
WTC11_00034340	chr16	+	8248	24	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	72.729163276682	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24723235	True	NA	42	True	AATAAA	-19	NA	24729697	24826221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24778343_24778469_24789231_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00034341	chr16	+	5007	18	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	85.7057410471604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24791677	False	NA	42	True	AATAAA	-19	NA	24791689	24826221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24791818_24793472_24793650_24794543_24794720_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805673_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00034342	chr16	+	4297	8	ISM	ENSG00000090905.19	ENST00000450465.6	3700	18	15182	-1435	0	0	intron_retention	FALSE	canonical	3	217	junction_2	18.5911982685685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24806650	False	NA	42	True	AATAAA	-19	NA	24806668	24826221	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873
WTC11_00034353	chr16	+	4376	22	NIC	ENSG00000168488.19	novel	4456	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	52	junction_20	135.130372925833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28822808	False	NA	19	True	AATAAA	-26	NA	28823081	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932
WTC11_00034357	chr16	+	3404	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_22	149.118759842154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28823299	True	NA	19	True	AATAAA	-26	NA	28824466	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
WTC11_00034358	chr16	+	2957	18	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_16	151.466853180677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28829440	False	NA	19	True	AATAAA	-26	NA	28829452	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
WTC11_00034361	chr16	+	3152	21	FSM	ENSG00000196296.14	ENST00000536376.5	3130	21	-22	0	-22	0	multi-exon	TRUE	canonical	1	1	junction_19	6.83447144993671	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGCCTCTGTGCAAG	28879818	True	NA	4	True	AATAAA	-14	NA	28880030	28904464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28880095_28880914_28881020_28882450_28882590_28884574_28884656_28887188_28887275_28887424_28887723_28888786_28888954_28894154_28894244_28894504_28894608_28894821_28894954_28897999_28898126_28898232_28898452_28900580_28900917_28901862_28902084_28902183_28902387_28902579_28902666_28902777_28902912_28903029_28903148_28903322_28903441_28903699_28903742_28904179
WTC11_00034362	chr16	+	1020	8	ISM	ENSG00000177455.15	ENST00000538922.8	1918	15	4825	11	-3	-9	3prime_fragment	FALSE	canonical	2	9	junction_5	1.92724822331886	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTTCCAATCCTATGAA	28936753	True	NA	27	True	AATAAA	-8	NA	28936795	28939331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_28937137_28937270_28937376_28937454_28937524_28937623_28937681_28937768_28937826_28938675_28938769_28938871_28938979_28939140
WTC11_00034363	chr16	+	2093	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	153.940171459203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACCCCAGGTGCCTGC	28970152	True	NA	7	True	AATAAA	-8	NA	28974800	28984537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
WTC11_00034372	chr16	+	2288	2	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGATTAATTTTTTAT	29724984	False	NA	NA	False	NA	NA	NA	29725003	29728165	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_29725792_29726665
WTC11_00034378	chr16	+	2474	4	FSM	ENSG00000167371.21	ENST00000358758.12	2462	4	-12	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	42.0502345085283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTCCAATCTCGGTTG	29810464	True	NA	6	True	AATAAA	-17	NA	29812180	29815881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812324_29812989_29813934_29814332_29814466_29814627
WTC11_00034379	chr16	+	3246	6	Fusion	ENSG00000280607.1_ENSG00000280893.1	novel	2252	6	NA	NA	-45	268	intron_retention	FALSE	non_canonical	0	0	junction_3	433.29454185346	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGAGAACCAGCTGC	29810499	True	NA	NA	False	NA	NA	NA	29812215	29820360	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_29812324_29812989_29813934_29814332_29814466_29815835_29817008_29817209_29817293_29819554
WTC11_00034383	chr16	+	674	6	FSM	ENSG00000149925.22	ENST00000562168.5	666	6	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5139.58701064589	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAGTATCTGCCAGCA	30054802	True	NA	NA	False	NA	NA	NA	30064163	30068957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064249_30064423_30064506_30067233_30067334_30067449_30067662_30068645_30068701_30068817
WTC11_00034384	chr16	+	1380	11	FSM	ENSG00000149925.22	ENST00000569545.5	1359	11	-21	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	4201.71124186325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACTCTTGAAGAGGAG	30054802	True	NA	NA	False	NA	NA	NA	30064163	30070257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064249_30064423_30064506_30065875_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00034393	chr16	+	5202	18	FSM	ENSG00000156860.16	ENST00000356166.11	5196	18	-6	0	-6	0	multi-exon	TRUE	canonical	1	2	junction_2	4.61305504157592	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGGCTCCTCTTTGAGT	30657438	True	NA	18	True	TATAAA	-20	NA	30658424	30670810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30659978_30660262_30660443_30661179_30661216_30661303_30661334_30662419_30662469_30662558_30662860_30664214_30664517_30664714_30664921_30665034_30665080_30665305_30665402_30665637_30665707_30666511_30666542_30666918_30666991_30667319_30667438_30667541_30667623_30668559_30668644_30668771_30668980_30669068
WTC11_00034396	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	78.661016746261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	30746423	True	NA	-12	True	NA	NA	NA	30748439	30757331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
WTC11_00034400	chr16	+	1542	2	FSM	ENSG00000260083.3	ENST00000662645.2	1361	2	-205	24	35	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTACATTACTTAAAT	NA	False	NA	-8	True	NA	NA	NA	30875256	30895196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30876119_30894516
WTC11_00034403	chr16	+	5934	19	FSM	ENSG00000099381.19	ENST00000684162.1	5934	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	8.39477350630869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	30954924	True	NA	16	True	ATTAAA	-16	NA	30957970	30984664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30958125_30958716_30958882_30959090_30959187_30961266_30961538_30963432_30963555_30964093_30964324_30964611_30965462_30965600_30966387_30966883_30967061_30967500_30967589_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
WTC11_00034408	chr16	+	1049	8	FSM	ENSG00000103510.20	ENST00000538768.2	2500	8	1451	0	-237	0	multi-exon	FALSE	canonical	3	98	junction_6	5.61702950038214	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGTTCTTCATTTCAC	31127014	False	NA	54	True	NA	NA	NA	31127034	31131393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745_31130901_31131194
WTC11_00034410	chr16	+	1114	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	-19	0	-19	0	multi-exon	FALSE	canonical	1	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	31201806	True	NA	11	True	ATTAAA	-22	NA	31201865	31203452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31201987_31202459
WTC11_00034420	chr16	+	859	3	FSM	ENSG00000197302.11	ENST00000539915.5	837	3	-22	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_1	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGTATGTAATGTGG	NA	False	NA	-36	True	AAAAAG	-12	NA	31713209	31759841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713449_31753765_31753901_31759356
WTC11_00034465	chr16	+	787	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	-12	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	241.811165995287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223986	True	NA	25	True	AATAAA	-15	NA	67227144	67229278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
WTC11_00034470	chr16	+	1464	9	ISM	ENSG00000159753.14	ENST00000545661.5	4119	38	7702	-51	-16	0	3prime_fragment	FALSE	canonical	3	43	junction_7	34.1201919689793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTGGAGCGGTATC	67652246	True	NA	12	True	ATTAAA	-14	NA	67652948	67657569	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67657238_67657317_67657405
WTC11_00034477	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	34.3378931952866	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262725	True	NA	3	True	AATAAA	-16	NA	68264559	68301819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
WTC11_00034479	chr16	+	2075	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	68.2450940151954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306684	True	NA	5	True	AATAAA	-18	NA	68310999	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00034480	chr16	+	2097	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	-6	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	74.5125566179956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306734	True	NA	5	True	AATAAA	-18	NA	68311049	68357259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00034481	chr16	+	4258	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	74.7389902705854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	68306798	True	NA	-11	True	AATACA	-9	NA	68311113	68358553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
WTC11_00034484	chr16	+	4379	4	FSM	ENSG00000184939.16	ENST00000398253.6	4384	4	0	5	0	0	multi-exon	TRUE	canonical	3	30	junction_3	9.7410927974683	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCAGTTTGTCGTTT	68539711	False	NA	12	True	AATAAA	-18	NA	68539757	68567131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68539826_68557997_68558125_68558472_68558569_68563043
WTC11_00034490	chr16	+	4207	4	NIC	ENSG00000103044.11	novel	1163	4	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.4447831962576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69106143	False	NA	14	True	AATAAA	-22	NA	69106165	69117660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_69106317_69109395_69110032_69113440_69113543_69114342
WTC11_00034491	chr16	+	4117	4	FSM	ENSG00000103044.11	ENST00000306560.1	4220	4	103	0	103	0	multi-exon	FALSE	canonical	1	1	junction_1	45.8427263102398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTACTTTGTATTTAATG	69107614	False	NA	22	True	AATAAA	-30	NA	69107642	69117668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69107696_69109395_69110032_69113440_69113543_69114342
WTC11_00034492	chr16	+	2194	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	241.466871433743	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124612	True	NA	NA	False	AATAAA	-16	NA	69132646	69169021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_69132690_69133457_69133619_69136695_69136892_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
WTC11_00034493	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	210.086225684175	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	69334403	True	NA	15	True	AATAAA	-28	NA	69339796	69343104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
WTC11_00034501	chr16	+	3365	21	NNC	ENSG00000189091.13	novel	9692	26	NA	NA	0	32654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	288.693171897085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTTGTGCCTGTTTTCC	70538351	True	NA	NA	False	AAGAAA	-34	NA	70538394	70610324	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672_70572299_70610201
WTC11_00034504	chr16	+	830	2	FSM	ENSG00000140832.11	ENST00000567566.1	850	2	0	20	0	-20	multi-exon	FALSE	canonical	3	151	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGGAACGTCTCAAAA	71619946	True	NA	NA	False	NA	NA	NA	71626160	71629660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71626697_71629366
WTC11_00034519	chr16	+	799	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	-24	-97	0	97	multi-exon	FALSE	canonical	3	48	junction_2	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATGTGCTAGATACCAAA	77721804	True	NA	NA	False	AAAAAG	-11	NA	77722491	77736346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77722618_77725430_77725585_77735827
WTC11_00034540	chr16	+	730	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	-14	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2795.26877061938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727292	True	NA	30	True	AATAAA	-19	NA	85799682	85807002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
WTC11_00034545	chr16	+	2336	14	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_11	29.2184184433614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949554	True	NA	15	True	AATAAA	-16	NA	87951486	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
WTC11_00034546	chr16	+	1230	1	FSM	ENSG00000172530.21	ENST00000612301.1	502	1	-731	3	29	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTTGGATTCTGTCATC	87949583	False	NA	9	True	ATTAAA	-18	NA	87951515	87952745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87951500_87952700
WTC11_00034547	chr16	+	3021	14	NIC	ENSG00000172530.21	novel	586	5	NA	NA	82	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	42.2256547274256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87951554	False	NA	15	True	AATAAA	-16	NA	87951568	88077316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_87952274_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
WTC11_00034553	chr16	+	2267	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	-20	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	38.5816434315147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	89092438	True	NA	9	True	AAAACA	-24	NA	89093862	89154589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
WTC11_00034561	chr16	+	3748	17	FSM	ENSG00000197912.16	ENST00000643105.1	3748	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	173.705468663914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498462	True	NA	10	True	AATAAA	-2	NA	89508497	89557747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00034564	chr16	+	3475	8	FSM	ENSG00000197912.16	ENST00000643409.1	3475	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	231.315316203238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	NA	False	NA	18	True	AATAAA	-10	NA	89543684	89557755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89544773_89545871_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
WTC11_00034574	chr16	+	3171	15	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	34	junction_9	32.4173202634213	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTCTCTTGTGCCTT	89573472	True	NA	9	True	AATAAA	-15	NA	89575763	89597241	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587050_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89596352_89596483
WTC11_00034575	chr16	+	2442	15	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	36.7742700644827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573478	True	NA	14	True	AATAAA	-20	NA	89575769	89597246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89576072_89577526_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
WTC11_00034576	chr16	+	3175	9	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_2	51.5963903776223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	NA	False	NA	14	True	AATAAA	-20	NA	89587042	89597246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89587103_89587555_89587717_89587753_89587776_89587865_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89596352_89596483
WTC11_00034577	chr16	+	1922	1	NIC	ENSG00000178773.15	novel	2442	15	NA	NA	-256	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTCTCTTGTGCCTT	89595306	False	NA	9	True	AATAAA	-15	NA	89595319	89597241	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89595300_89597200
WTC11_00034578	chr16	+	1165	6	FSM	ENSG00000015413.10	ENST00000565249.5	1165	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	39.3273441767938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAACCTGTCCCAAGTGG	89613536	False	NA	NA	False	NA	NA	NA	89613548	89637529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89613720_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89637381_89637467
WTC11_00034582	chr16	+	1810	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	130.315722382221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681641	True	NA	35	True	GATAAA	-16	NA	89686703	89696354	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694568_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00034583	chr16	+	1974	14	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	149.127521777435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681646	False	NA	35	True	GATAAA	-16	NA	89686708	89696354	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89686798_89687588_89687816_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00034584	chr16	+	1700	13	NNC	ENSG00000185324.22	novel	1767	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	133.375696395141	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681653	False	NA	35	True	GATAAA	-16	NA	89686715	89696354	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89686760_89689251_89689323_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
WTC11_00034588	chr16	+	3501	12	NIC	ENSG00000140995.17	novel	3725	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	93	junction_9	163.706146736581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGGTGTGTGTGTGGT	89942044	True	NA	3	True	ATTAAA	-12	NA	89948774	89968058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
WTC11_00034596	chr16	-	253	1	Antisense	novelGene_ENSG00000233614.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTGCTTTTAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	14336	14083	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14100_14300
WTC11_00034597	chr16	-	1881	6	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	696	297	intron_retention	FALSE	canonical	3	22	junction_1	85.7797178824925	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTGCTTTTAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	17372	14083	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14512_14651_14721_15480_16449_16540_16739_16915_17052_17290
WTC11_00034598	chr16	-	2816	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	35	junction_7	57.2570615186459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	-69637	True	NA	-7	True	AATAAA	-35	NA	72617	58058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
WTC11_00034599	chr16	-	2119	13	NIC	ENSG00000103148.17	novel	2784	12	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_1	39.9738629884856	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAGTTCCCGTCCAT	-137555	False	NA	-17	True	GATAAA	-17	NA	138389	84270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84596_86667_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
WTC11_00034600	chr16	-	2724	10	NIC	ENSG00000103148.17	novel	2812	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	29	junction_9	45.5119032049126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137818	False	NA	-44	True	AATAAA	-32	NA	138652	85800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_138149
WTC11_00034601	chr16	-	2674	13	NNC	ENSG00000103148.17	novel	3128	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	48.1308257657075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137843	True	NA	-44	True	AATAAA	-32	NA	138677	85800	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149_138367_138641
WTC11_00034603	chr16	-	1422	12	NIC	ENSG00000007392.17	novel	989	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	246.043535756588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	-229339	False	NA	-20	True	AATACA	-23	NA	229374	189097	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
WTC11_00034608	chr16	-	2566	9	NIC	ENSG00000103126.15	novel	3707	11	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	70.2743507618534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	-349355	True	NA	-1	True	AATAAA	-18	NA	352649	287439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_352368
WTC11_00034609	chr16	-	1130	1	FSM	ENSG00000276984.1	ENST00000621088.1	301	1	-834	5	-834	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAGTGATGTGTCAACC	NA	False	NA	NA	False	GATAAA	-14	NA	425377	424247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_424200_425400
WTC11_00034612	chr16	-	2955	11	NIC	ENSG00000103245.14	novel	3212	10	NA	NA	0	20	intron_retention	FALSE	canonical	3	19	junction_10	45.0488623607744	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACATCTGCCAACACTGA	-739212	True	NA	12	True	AATAAA	-44	NA	740934	729739	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740021
WTC11_00034613	chr16	-	2980	11	NNC	ENSG00000103245.14	novel	3212	10	NA	NA	0	20	intron_retention	FALSE	canonical	2	10	junction_10	47.462511522253	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACATCTGCCAACACTGA	-739212	True	NA	12	True	AATAAA	-44	NA	740934	729739	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_739996
WTC11_00034615	chr16	-	1093	1	FSM	ENSG00000103227.19	ENST00000611669.1	1448	1	97	258	97	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGGCCGGGAGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	855851	854758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_854800_855900
WTC11_00034616	chr16	-	3222	2	FSM	ENSG00000260807.7	ENST00000562570.1	3222	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTCTCCCAAGTATT	-980545	False	NA	0	True	AATGAA	-22	NA	980913	975760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_977094_979024
WTC11_00034618	chr16	-	2195	6	NNC	ENSG00000059145.19	novel	4320	6	NA	NA	-2	-233	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	32.3481065906492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCCTACCGACGGTTTC	-1378357	True	NA	NA	False	NA	NA	NA	1379685	1366040	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1366396_1367091_1367350_1367655_1368582_1369947_1370358_1371518_1371612_1379532
WTC11_00034622	chr16	-	4032	24	NIC	ENSG00000103249.18	novel	4168	25	NA	NA	10	-2	intron_retention	FALSE	canonical	3	220	junction_18	26.4141080479685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCGCCTTTGCCAGCG	-1470169	True	NA	-10	True	AATAAA	-10	NA	1475015	1445345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
WTC11_00034623	chr16	-	495	4	FSM	ENSG00000187535.14	ENST00000566818.1	722	4	227	0	227	0	multi-exon	FALSE	canonical	2	17	junction_3	56.2454936466519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGGGAGCCGGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	1526797	1524773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1524917_1525230_1525327_1525886_1526078_1526732
WTC11_00034626	chr16	-	1276	8	FSM	ENSG00000063854.13	ENST00000455446.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_4	68.1924048676438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGCCGCGTCTTC	-1825094	True	NA	NA	False	NA	NA	NA	1826834	1808871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819896_1820015_1822299_1822365_1822864_1823038_1826711
WTC11_00034627	chr16	-	1783	13	FSM	ENSG00000162039.17	ENST00000397344.7	1792	13	9	0	-5	0	multi-exon	FALSE	canonical	1	2	junction_1	11.3639292891539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATTTGAATGATTTAT	-1872067	True	NA	-5	True	AATAAA	-15	NA	1872169	1833987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1834367_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
WTC11_00034629	chr16	-	1107	6	ISM	ENSG00000140988.16	ENST00000343262.9	945	7	13	3	0	0	intron_retention	FALSE	canonical	3	38190	junction_4	6239.67947894762	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964670	False	NA	-27	True	AATAAA	-15	NA	1964813	1962060	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448
WTC11_00034630	chr16	-	351	1	FSM	ENSG00000255513.1	ENST00000530779.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGAAGAAACGATTGAGA	-1963952	False	NA	NA	False	AAAAAG	-6	NA	1964095	1963744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1963700_1964100
WTC11_00034632	chr16	-	1541	8	FSM	ENSG00000196408.12	ENST00000356120.9	1541	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.861903880397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCGTCTAAGCGTGC	-1981457	False	NA	-12	True	AGTAAA	-16	NA	1981469	1978916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1979350_1979424_1979543_1979789_1979904_1979996_1980182_1980366_1980545_1980655_1980732_1980938_1981020_1981113
WTC11_00034633	chr16	-	3287	12	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	11	4	intron_retention	TRUE	canonical	3	78	junction_4	34.4201075194848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCTGAGCTTCTCTG	-2007817	True	NA	-3	True	AATAAA	-26	NA	2009753	1997649	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00034634	chr16	-	3428	11	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_3	34.1509882726694	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	-2007828	True	NA	-7	True	AATAAA	-22	NA	2009764	1997653	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00034639	chr16	-	783	5	FSM	ENSG00000182685.8	ENST00000562360.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	12.2754836971909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCGACCTGGCCCAGCC	-2204791	False	NA	NA	False	NA	NA	NA	2210833	2209361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
WTC11_00034640	chr16	-	4610	6	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	4	-70	intron_retention	FALSE	canonical	3	60	junction_1	557.3349441763	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCATCGACATCTGCT	-2208794	True	NA	NA	False	NA	NA	NA	2214836	2209431	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210282_2210521_2210651_2210782_2214054_2214137
WTC11_00034641	chr16	-	3807	8	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	0	-70	intron_retention	FALSE	canonical	3	27	junction_6	491.419642776032	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCATCGACATCTGCT	-2208798	True	NA	NA	False	NA	NA	NA	2214840	2209431	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782_2212848_2213580_2214054_2214137
WTC11_00034644	chr16	-	1792	8	FSM	ENSG00000205937.12	ENST00000568631.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1217.18172305485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCAGCCGGGCCCCGGC	-2267181	False	27273	NA	False	NA	NA	NA	2267829	2253827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267208
WTC11_00034645	chr16	-	1232	5	FSM	ENSG00000167972.14	ENST00000566200.1	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	8.36660026534076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACAGGTAGAGCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	2283741	2278294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2278459_2278942_2279131_2281026_2281222_2281380_2281510_2283185
WTC11_00034653	chr16	-	2375	6	FSM	ENSG00000172382.10	ENST00000302641.8	1135	6	-1236	-4	-909	1	multi-exon	FALSE	canonical	2	6	junction_3	3.05941170815567	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGGATCCTTGGG	-2721441	True	NA	-1	True	AATAAA	-23	NA	2721460	2712417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2715717_2715881_2716499_2716527_2720114
WTC11_00034655	chr16	-	334	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	-5	2	0	-2	multi-exon	FALSE	canonical	3	411	junction_1	2468.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGGTTGCTGCCTCT	-2700877	True	NA	-9	True	AATAAA	-14	NA	2777277	2771944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2776992_2777128_2777236
WTC11_00034657	chr16	-	1420	4	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	61348	intron_retention	FALSE	non_canonical	0	0	junction_1	1898.34600522548	1378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTAGCCGGGGGTG	-2980523	True	NA	NA	False	TATAAA	-31	NA	3018183	2953363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953393_2999479_2999505_3014711_3016043_3018148
WTC11_00034659	chr16	-	361	1	FSM	ENSG00000274367.1	ENST00000621689.1	417	1	-22	78	-22	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGAGATCGCCCCACT	-2981577	False	NA	NA	False	NA	NA	NA	2981613	2981252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2981300_2981600
WTC11_00034669	chr16	-	2983	7	NNC	ENSG00000140987.21	novel	3108	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	15.7559512565887	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399436	True	NA	-4	True	AATAAA	-17	NA	3400976	3382084	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397648_3400944
WTC11_00034676	chr16	-	620	4	FSM	ENSG00000005339.15	ENST00000571826.5	627	4	0	7	0	-7	multi-exon	FALSE	canonical	3	68	junction_1	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCATGTCTTTGTATCA	-3778142	False	NA	NA	False	ATTAAA	-14	NA	3778172	3773642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3773931_3774568_3774694_3777612_3777658_3778010
WTC11_00034678	chr16	-	2832	8	NNC	ENSG00000090447.12	novel	2163	7	NA	NA	-982	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	23.9395497204172	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4274043	False	NA	-4	True	AATAAA	-20	NA	4274057	4257185	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657_4272879_4273243
WTC11_00034679	chr16	-	3286	31	FSM	ENSG00000103426.12	ENST00000572467.5	3284	31	0	-2	0	2	multi-exon	FALSE	canonical	2	12	junction_4	172.959481446442	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4415710	True	NA	-4	True	AATAAA	-16	NA	4416587	4340248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
WTC11_00034683	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	160.327913976325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-4471965	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
WTC11_00034685	chr16	-	2636	5	FSM	ENSG00000089486.17	ENST00000399599.7	3009	5	445	-72	0	2	multi-exon	FALSE	canonical	3	537	junction_1	21.8460522749535	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTTTTAAAACCCTT	NA	False	NA	28	True	AATACA	-5	NA	4514664	4510666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574
WTC11_00034690	chr16	-	1341	10	NIC	ENSG00000067836.13	novel	1418	11	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	66	junction_9	81.638921968917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800012	True	NA	-7	True	AATAAA	-16	NA	4802628	4796967	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802526
WTC11_00034693	chr16	-	3324	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	254	junction_1	145.988106857203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTGTGCCGCAGGAGT	-4832852	True	NA	-5	True	AATAAA	-15	NA	4847271	4803206	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00034695	chr16	-	6279	22	NNC	ENSG00000118898.16	novel	6251	22	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.5025585042127	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTCTTCTTTTGCA	-4935271	True	NA	0	True	AATAAA	-30	NA	4937179	4882506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4886048_4887134_4887228_4888101_4888219_4888977_4889062_4890183_4890335_4890727_4890922_4891810_4891949_4892036_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
WTC11_00034705	chr16	-	14440	14	FSM	ENSG00000183454.18	ENST00000396573.6	14450	14	0	10	0	-6	multi-exon	FALSE	canonical	1	3	junction_13	2.6999890422745	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAATTGAGTTGTG	-10182643	False	NA	-13	True	AATAAA	-25	NA	10182754	9753413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9764949_9768850_9769090_9798276_9798465_9822263_9822425_9829422_9829653_9834104_9834231_9840646_9840801_9840935_9841105_9849755_9849962_9890985_9891101_9937958_9938552_10179997_10180430_10181876_10182068_10182653
WTC11_00034706	chr16	-	488	2	FSM	ENSG00000183454.18	ENST00000463531.1	488	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCCAGCATGTCCA	NA	False	NA	NA	False	NA	NA	NA	9769228	9764838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9764949_9768850
WTC11_00034709	chr16	-	638	2	FSM	ENSG00000263080.1	ENST00000572913.1	714	2	0	76	0	-76	multi-exon	FALSE	canonical	1	2	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTACTAAATCACCTCTA	-11345016	True	NA	NA	False	NA	NA	NA	11345211	11341884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11342424_11345112
WTC11_00034722	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_7	266.584596214364	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	15056079	15037853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
WTC11_00034727	chr16	-	1544	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	398	4	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	121.376627545363	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	-13	True	AATAAA	-25	NA	15377896	15363623	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15377377
WTC11_00034728	chr16	-	7154	27	NNC	ENSG00000166783.22	novel	7730	27	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_20	15.160092426066	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-15641267	True	NA	-17	True	AATAAA	-20	NA	15643118	15594386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625798_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15636192_15636343_15639089_15639292_15643017
WTC11_00034735	chr16	-	300	3	Antisense	novelGene_ENSG00000214967.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	74	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTCAGCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	16393958	16393532	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_16393610_16393666_16393793_16393861
WTC11_00034741	chr16	-	1371	9	NNC	ENSG00000233024.7	novel	1522	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_8	125.107703599738	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18375069	18358120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18372577_18372664_18374831
WTC11_00034748	chr16	-	4316	31	FSM	ENSG00000185164.15	ENST00000330537.10	4352	31	36	0	1	0	multi-exon	FALSE	canonical	3	495	junction_20	235.907712652403	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	NA	False	NA	NA	False	AATAAA	-29	NA	18562175	18417324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347_18433476_18434653_18434768_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
WTC11_00034752	chr16	-	1560	8	ISM	ENSG00000157106.18	ENST00000532700.6	1259	10	-228	1227	22	-1227	5prime_fragment	FALSE	canonical	3	9	junction_7	22.0759357395221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAGTTCTTTTATTTTC	-18920667	True	NA	NA	False	AATAAA	-20	NA	18926386	18885331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986_18900045_18925949
WTC11_00034760	chr16	-	848	6	FSM	ENSG00000169246.16	ENST00000519305.6	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	155.385456204884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATCAATGGAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	21425402	21410969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21411130_21411241_21411342_21414956_21415086_21419489_21419767_21424978_21425137_21425378
WTC11_00034761	chr16	-	2774	12	FSM	ENSG00000180747.15	ENST00000522841.6	2774	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	51.888628350209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTGGAGA	-21520433	False	NA	NA	False	NA	NA	NA	21520444	21463204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21463994_21464715_21464818_21467091_21467317_21469746_21469920_21471653_21471752_21472672_21472746_21473123_21473250_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21519827
WTC11_00034763	chr16	-	2504	6	FSM	ENSG00000248124.9	ENST00000688619.1	2527	6	23	0	10	0	multi-exon	FALSE	canonical	3	45	junction_2	44.0980725202361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21818990	True	NA	NA	False	AATAAA	-20	NA	21820410	21810426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655
WTC11_00034767	chr16	-	2375	6	ISM	ENSG00000185864.18	ENST00000542133.5	910	9	8285	44	1890	25	3prime_fragment	FALSE	canonical	3	191	junction_3	95.9387304481355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATGGGCCACCAGC	NA	False	NA	NA	False	TTTAAA	-1	NA	21849317	21837667	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412
WTC11_00034770	chr16	-	968	7	FSM	ENSG00000185710.9	ENST00000380598.4	968	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	7.87400787401181	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATGTGAGTGCTACATC	-21889276	False	NA	NA	False	TATAAA	-15	NA	21889287	21884953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21885026_21885173_21885317_21886329_21886485_21887583_21887749_21887916_21888114_21888500_21888701_21889251
WTC11_00034774	chr16	-	1491	1	FSM	ENSG00000274460.1	ENST00000616774.1	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTGGATGTTTTATT	-21951611	False	NA	NA	False	AATAAA	-26	NA	21951708	21950217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21950200_21951700
WTC11_00034777	chr16	-	3840	10	FSM	ENSG00000103356.18	ENST00000674054.1	3840	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	72.3414400645805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGAAGCAGTATTTTT	-23551447	True	NA	-5	True	AGTAAA	-17	NA	23557350	23522016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23523418_23523510_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
WTC11_00034779	chr16	-	3828	12	NIC	ENSG00000083093.10	novel	4008	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	32.034330757914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATTCTGCTTGGCATG	-23638832	True	NA	-11	True	AATAAA	-11	NA	23641285	23603170	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_23603670_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
WTC11_00034786	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.14862224856557	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	-28356580	True	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
WTC11_00034788	chr16	-	2651	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	28	-994	0	-889	multi-exon	FALSE	canonical	3	52	junction_15	44.538921805041	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCACTGCTCCTGGC	-28490821	True	NA	NA	False	NA	NA	NA	28492046	28476284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
WTC11_00034789	chr16	-	1974	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	-17	0	0	multi-exon	FALSE	canonical	3	122	junction_12	31.6401736992068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-28490819	True	NA	0	True	AATAAA	-27	NA	28492044	28477271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
WTC11_00034790	chr16	-	2445	10	FSM	ENSG00000196502.13	ENST00000562058.5	1876	10	-41	-528	-8	132	multi-exon	FALSE	canonical	2	6	junction_8	16.947267524389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCATAAGAGCAAAACTC	-28623322	True	NA	NA	False	NA	NA	NA	28623594	28605063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930_28610192_28620062_28620134_28623130
WTC11_00034791	chr16	-	499	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	-62	0	-62	0	multi-exon	FALSE	canonical	3	50	junction_1	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	NA	False	NA	-7	True	ATTAAA	-19	NA	28880000	28878956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28879108_28879541_28879756_28879866
WTC11_00034794	chr16	-	993	5	NIC	ENSG00000177548.13	novel	841	5	NA	NA	0	-63	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	45.4498349831988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGGTTCCCGAGGGC	-28924062	True	NA	NA	False	NA	NA	NA	28924710	28914321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28914587_28914671_28914783_28919785_28919944_28921062_28921214_28924402
WTC11_00034800	chr16	-	2430	13	ISM	ENSG00000205534.6_ENSG00000279583.1	ENST00000566127.1	4221	29	-383	17443	-383	-17443	5prime_fragment	FALSE	canonical	3	58	junction_12	156.434824021593	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	-29594739	True	NA	NA	False	AATAAA	-35	NA	29595349	29545010	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29594886
WTC11_00034807	chr16	-	2949	6	ISM	ENSG00000149927.18	ENST00000564944.5	1782	12	-1763	1374	-848	0	intron_retention	FALSE	canonical	3	18	junction_5	10.590561835899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTGGGGGCTGCAGG	-30013165	False	NA	NA	False	NA	NA	NA	30013184	30007172	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898
WTC11_00034808	chr16	-	995	3	FSM	ENSG00000149927.18	ENST00000567824.1	1050	3	55	0	55	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGCTCCTAGGAAGAG	-30021523	False	384	NA	False	NA	NA	NA	30021633	30012263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30012678_30013466_30013597_30021182
WTC11_00034811	chr16	-	689	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	-2	0	0	multi-exon	FALSE	canonical	3	2705	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTCGATGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	30193697	30192931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30193456_30193532
WTC11_00034812	chr16	-	2362	13	FSM	ENSG00000183604.15	ENST00000411546.4	2374	13	7	5	-1	-5	multi-exon	FALSE	canonical	3	32	junction_8	155.838302059824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACGTTTCTTCTTTTTC	-30334611	True	NA	NA	False	AATAAA	-30	NA	30335374	30285022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334974
WTC11_00034813	chr16	-	2074	13	NNC	ENSG00000183604.15	novel	2374	13	NA	NA	236	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	160.447529498656	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAACGTTTCTTCTTTT	-30334055	False	763	NA	False	AATAAA	-28	NA	30334818	30285024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298588_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334701
WTC11_00034814	chr16	-	691	2	ISM	ENSG00000180096.13	ENST00000573615.5	1616	9	3454	-47	3454	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGAGCCTTCTCCTTCC	-30378876	False	NA	-2	True	AATAAA	-19	NA	30378916	30378136	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_30378521_30378609
WTC11_00034816	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	-30526787	False	NA	NA	False	NA	NA	NA	30526821	30524132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30526052_30526741
WTC11_00034819	chr16	-	2869	3	FSM	ENSG00000169951.10	ENST00000395091.3	2846	3	0	-23	0	23	multi-exon	FALSE	canonical	2	12	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTACAAAGTACTGTC	-30558267	True	NA	-14	True	AGTAAA	-40	NA	30558374	30553740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30556108_30557732_30557847_30557986
WTC11_00034824	chr16	-	3951	1	FSM	ENSG00000260852.1	ENST00000563777.1	3951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-30923184	True	NA	NA	False	NA	NA	NA	30923269	30919318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30919300_30923300
WTC11_00034826	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	478.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31085801	True	NA	-5	True	AATAAA	-30	NA	31094760	31090841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31093311_31093483_31094556
WTC11_00034833	chr16	-	624	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	58	-93	58	93	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTCTGTCTGGGTGTC	-31216878	True	NA	88	True	NA	NA	NA	31217077	31215868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31216158_31216742
WTC11_00034834	chr16	-	340	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	30	2	30	-2	multi-exon	FALSE	canonical	2	6	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGCGGCTCTGTGGGG	-31428247	False	NA	-3	True	AATAAA	-14	NA	31428330	31427732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31427858_31428014_31428152_31428252
WTC11_00034835	chr16	-	3278	1	Genic_Genomic	ENSG00000261474.1	novel	NA	NA	NA	NA	-2963	-3644	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACCAAAAATATAAAAATTA	-31456277	False	NA	NA	False	NA	NA	NA	31456456	31453178	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_31453200_31456500
WTC11_00034862	chr16	-	2823	7	FSM	ENSG00000172775.17	ENST00000309137.13	2823	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	348.718447397833	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-57178237	True	NA	NA	False	AATAAA	-18	NA	57186039	57152465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185820
WTC11_00034888	chr16	-	1357	3	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-71	7	combination_of_known_junctions	FALSE	canonical	3	133	junction_2	387.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-65231440	True	NA	-99	True	AATAAA	-24	NA	65235004	65229838	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65230206_65233014_65233886_65234885
WTC11_00034889	chr16	-	643	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	322.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65231440	True	NA	-101	True	AATAAA	-22	NA	65235004	65229840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65230206_65233014_65233174_65234885
WTC11_00034890	chr16	-	770	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-3	-71	3	multi-exon	FALSE	canonical	3	371	junction_2	268.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-65231440	True	NA	-103	True	AATAAA	-20	NA	65235004	65229842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_65230206_65233014_65233303_65234885
WTC11_00034895	chr16	-	3538	7	NIC	ENSG00000196123.13	novel	3500	8	NA	NA	0	138	intron_retention	FALSE	canonical	3	20	junction_5	27.471197037382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGTGGTTTGGGAATAG	-67181411	True	NA	-44	True	NA	NA	NA	67183963	67176511	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181557_67181698_67183261
WTC11_00034924	chr16	-	4784	8	NIC	ENSG00000157350.13	novel	7920	7	NA	NA	3	2065	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	91.8441448257618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCCTTCATTGTTCTG	-70436120	True	NA	-11	True	ATTAAA	-16	NA	70439097	70379508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70400695_70401095_70438948
WTC11_00034927	chr16	-	798	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	8	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGACGGTCATAGAA	-70621528	False	NA	-2	True	AATAAA	-24	NA	70621539	70616494	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70617059_70619646_70619806_70621464
WTC11_00034928	chr16	-	739	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTAAGACGGTCATAG	-70621528	False	NA	-4	True	AATAAA	-22	NA	70621539	70616496	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70617059_70619646_70619749_70621464
WTC11_00034929	chr16	-	827	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	23.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGACGGTCATAGAA	-70620161	True	NA	-2	True	AATAAA	-24	NA	70621701	70616494	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70616926_70619646_70619806_70621464
WTC11_00034932	chr16	-	3144	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	14.8492424049175	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATGAAAAATAAAGAT	-71461316	True	NA	-41	True	NA	NA	NA	71462252	71447635	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71461658
WTC11_00034938	chr16	-	882	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	27.1825107171668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72092239	True	NA	-3	True	AATAAA	-17	NA	72093608	72084856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
WTC11_00034944	chr16	-	1752	14	FSM	ENSG00000103091.15	ENST00000536050.5	1752	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	53.3256158124325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTCATAGACTTC	-74981084	False	3742	NA	False	AAAACA	-22	NA	74984826	74912004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984602
WTC11_00034945	chr16	-	1626	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	21	3273	21	-1	5prime_fragment	FALSE	canonical	3	167	junction_7	12.7148983107713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGGGTCATAGACTT	-74981320	True	NA	NA	False	AAAACA	-21	NA	74985062	74912005	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
WTC11_00034950	chr16	-	5547	3	NNC	ENSG00000166822.13	novel	5028	3	NA	NA	68	6	intron_retention	FALSE	canonical	1	1	junction_2	72.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTGGAATTATATTTC	-75464326	False	NA	-4	True	AATAAA	-16	NA	75464348	75443241	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_75447689_75451668_75451840_75463419
WTC11_00034951	chr16	-	4700	3	NIC	ENSG00000166822.13	novel	4959	3	NA	NA	34	6	intron_retention	FALSE	canonical	3	35	junction_2	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTGGAATTATATTTC	-75464360	False	NA	-4	True	AATAAA	-16	NA	75464382	75443241	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_75447689_75451737_75451840_75464231
WTC11_00034960	chr16	-	2540	4	FSM	ENSG00000140905.11	ENST00000639169.1	2537	4	0	-3	0	0	multi-exon	FALSE	canonical	3	2111	junction_2	74.2173983795055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACTGCATTTGCTGGT	-81087848	True	NA	-88	True	NA	NA	NA	81096336	81082404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81084595_81087600_81087665_81090600_81090681_81096130
WTC11_00034966	chr16	-	3737	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	101.25125345659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACTGGGGAAAACTATG	-84182642	True	NA	-11	True	ATTAAA	-15	NA	84187020	84177856	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184990_84186900
WTC11_00034967	chr16	-	3936	14	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_8	88.0776284822273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACTGGGGAAAACTATG	-84182642	True	NA	-11	True	ATTAAA	-15	NA	84187020	84177856	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
WTC11_00034968	chr16	-	2039	13	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	0	-212	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	113.134967332533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCGGAGCCCGGGAGACA	-84182642	True	NA	NA	False	GGGGCT	-28	NA	84187020	84179333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84186900
WTC11_00034974	chr16	-	3072	8	FSM	ENSG00000103248.19	ENST00000381214.9	1210	8	0	-1862	0	68	multi-exon	FALSE	canonical	3	14	junction_5	14.4518906326177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCAGTGAGGCAGGTG	-86554530	True	NA	67	True	NA	NA	NA	86555203	86530109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554752_86555168
WTC11_00034975	chr16	-	2958	7	ISM	ENSG00000103248.19	ENST00000360900.11	3028	8	487	0	0	0	3prime_fragment	FALSE	canonical	3	31	junction_5	7.50555349946513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-86554075	False	NA	-9	True	AATAAA	-15	NA	86554748	86530185	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644
WTC11_00034991	chr16	-	2433	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	2	-23	-2	0	multi-exon	FALSE	canonical	2	2	junction_6	161.7615700825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGGATCCCTGGAA	-89650046	True	NA	-28	True	NA	NA	NA	89657723	89644455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
WTC11_00034994	chr16	-	2688	3	FSM	ENSG00000003249.15	ENST00000392973.8	2691	3	4	-1	4	1	multi-exon	FALSE	canonical	3	720	junction_2	27	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCACAGTCTCTTCC	-90009416	False	NA	-6	True	ATTAAA	-21	NA	90010207	90004869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_90006493_90008783_90008925_90009283
WTC11_00035013	chr16	+	487	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	81	8	13	-8	multi-exon	FALSE	canonical	3	8	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCAGCCTGTGTGTGC	NA	False	NA	NA	False	AATAAA	-9	NA	172956	173702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_173008_173124_173330_173471
WTC11_00035014	chr16	+	2564	15	FSM	ENSG00000167930.17	ENST00000666018.1	2687	15	66	57	66	0	multi-exon	FALSE	canonical	0	0	junction_13	295.423044988376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAGGGTTGTGGAGTCA	234501	False	NA	NA	False	NA	NA	NA	234586	269898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775_269006_269519
WTC11_00035015	chr16	+	3078	14	FSM	ENSG00000167930.17	ENST00000301679.7	3326	14	66	182	66	0	multi-exon	FALSE	canonical	0	0	junction_13	233.624996636179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAGGGTTGTGGAGTCA	234501	False	NA	NA	False	NA	NA	NA	234586	269898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775
WTC11_00035017	chr16	+	1462	7	NIC	ENSG00000090565.17	novel	4801	14	NA	NA	354	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	45.5216676124922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTTGTGTCTTTAT	NA	False	NA	6	True	NA	NA	NA	426002	497448	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_496823_496860_497291
WTC11_00035018	chr16	+	4938	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	67.7599312575188	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	527766	True	NA	17	True	AATAAA	-18	NA	527822	554636	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_540092_540372_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553342
WTC11_00035019	chr16	+	6035	5	Fusion	ENSG00000127578.7_ENSG00000197562.10	novel	710	6	NA	NA	0	0	multi-exon	FALSE	canonical	2	2	junction_2	94.9434041942883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGCTTGCTGCTGC	589016	False	NA	7	True	AATAAA	-20	NA	590331	634116	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_590434_625431_625510_625884_626122_627341_631425_632581
WTC11_00035021	chr16	+	5974	40	NIC	ENSG00000161996.19	novel	5589	41	NA	NA	-2	0	intron_retention	FALSE	canonical	3	17	junction_8	21.5357446393876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	647323	True	NA	31	True	AATAAA	-17	NA	649350	667829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651823_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
WTC11_00035022	chr16	+	2518	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-24	0	intron_retention	TRUE	canonical	3	153	junction_1	375.626955069787	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643562	True	NA	19	True	ATTAAA	-19	NA	668080	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668357_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00035023	chr16	+	2390	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_4	300.988383364566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643613	True	NA	19	True	ATTAAA	-19	NA	668131	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00035024	chr16	+	2534	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	8	0	intron_retention	FALSE	canonical	3	107	junction_8	289.080161622603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643624	True	NA	19	True	ATTAAA	-19	NA	668142	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00035025	chr16	+	2487	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	153	junction_1	278.807768231621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643647	True	NA	19	True	ATTAAA	-19	NA	668165	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668357_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00035027	chr16	+	2415	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	637	junction_8	183.668817100236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668249	True	NA	19	True	ATTAAA	-19	NA	668352	674125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
WTC11_00035028	chr16	+	1622	6	ISM	ENSG00000103266.11	ENST00000219548.9	1340	7	-284	84	-98	0	intron_retention	FALSE	canonical	3	1110	junction_4	50.1876478827211	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGTAATAAAATCCG	679105	True	NA	-5	True	NA	NA	NA	680125	682717	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164
WTC11_00035029	chr16	+	1486	3	FSM	ENSG00000103254.10	ENST00000568916.1	454	3	-1049	17	42	0	multi-exon	FALSE	canonical	3	28	junction_2	106.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	720581	False	NA	0	True	NA	NA	NA	720622	722573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721703_721800_721942_722308
WTC11_00035030	chr16	+	914	4	NIC	ENSG00000103254.10	novel	870	5	NA	NA	36	-1	intron_retention	FALSE	canonical	3	183	junction_2	26.0426999794995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGACTCATGTTTTAT	721249	False	NA	15	True	GATAAA	-15	NA	721260	722588	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_721703_721800_721942_722083_722135_722308
WTC11_00035031	chr16	+	1297	9	NIC	ENSG00000103253.19	novel	1512	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	104.52152888281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726830	False	NA	9	True	AATAAA	-14	NA	726976	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_727141_727484_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
WTC11_00035032	chr16	+	1205	7	ISM	ENSG00000103253.19	ENST00000389703.8	1512	8	657	0	24	0	3prime_fragment	FALSE	canonical	0	0	junction_5	105.306563053887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726670	False	NA	9	True	AATAAA	-14	NA	727762	729715	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
WTC11_00035034	chr16	+	8099	35	NNC	ENSG00000196557.13	novel	8219	35	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2405382505753	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACTTGGATTCCTGC	1152184	False	NA	NA	False	AATAAA	-17	NA	1153266	1221765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1212510_1212529_1213702_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1219002_1219131_1219980
WTC11_00035036	chr16	+	560	1	FSM	ENSG00000277010.1	ENST00000621827.1	505	1	-46	-9	-46	9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGAGCTGGATAATTG	1223579	False	NA	57	True	AAGAAA	-43	NA	1223592	1224152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1223600_1224200
WTC11_00035039	chr16	+	4575	34	FSM	ENSG00000007516.14	ENST00000397488.6	4583	34	8	0	6	0	multi-exon	TRUE	canonical	2	2	junction_3	7.01997674226145	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTCTGCCGTTTCTTG	1332992	True	NA	8	True	AATATA	-17	NA	1333650	1349438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339112_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
WTC11_00035041	chr16	+	2159	7	FSM	ENSG00000090581.11	ENST00000684100.1	2208	7	49	0	49	0	multi-exon	FALSE	canonical	3	339	junction_1	11.3394591287827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1357733	False	NA	NA	False	GATAAA	-31	NA	1361693	1364387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
WTC11_00035044	chr16	+	5678	32	FSM	ENSG00000138834.15	ENST00000250894.8	5661	32	-17	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	38.0254309996023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	1703869	True	NA	15	True	AATAAA	-16	NA	1706165	1770317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
WTC11_00035045	chr16	+	5688	32	FSM	ENSG00000138834.15	ENST00000610761.2	5686	32	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	38.9480830565166	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGGACTTTATTATAAAAA	1703896	True	NA	49	True	NA	NA	NA	1706192	1770351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743331_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
WTC11_00035046	chr16	+	976	1	FSM	ENSG00000275092.1	ENST00000621884.1	722	1	-244	-10	-244	10	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCCTTTCCTGTGGTTT	1704711	False	NA	NA	False	TATAAA	-24	NA	1707007	1707983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1707000_1708000
WTC11_00035048	chr16	+	7022	8	FSM	ENSG00000197774.14	ENST00000568449.7	7022	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	8.03055389860297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACACCCATGACTCCG	1772793	True	NA	11	True	AATAAA	-27	NA	1772809	1781702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1773475_1773704_1773842_1774259_1774353_1775040_1775133_1775314_1775409_1775568_1775685_1775796_1775987_1776067
WTC11_00035050	chr16	+	708	3	FSM	ENSG00000095906.17	ENST00000566090.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTGGCATTAGACGCC	1771797	True	NA	NA	False	NA	NA	NA	1782955	1787264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786756
WTC11_00035051	chr16	+	315	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGCCGACCCTGCAA	1943412	True	NA	NA	False	NA	NA	NA	1943507	1944297	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_1943756_1944230
WTC11_00035052	chr16	+	2502	22	NNC	ENSG00000183751.16	novel	6783	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	125.081741980478	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGTCCGGCCTCTCTCC	1966868	True	NA	14	True	CATAAA	-14	NA	1972085	1978683	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978314_1978472_1978551
WTC11_00035053	chr16	+	1667	7	NIC	ENSG00000065054.14	novel	2160	7	NA	NA	-11	-10	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	87.3078843327833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTCCTCCCCGCCC	2024610	True	NA	3	True	AATAAA	-17	NA	2026916	2038479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037756
WTC11_00035054	chr16	+	2595	16	FSM	ENSG00000103197.18	ENST00000643745.1	2588	16	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	49.3659351735137	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACGGTGAAACCC	2043148	True	NA	NA	False	NA	NA	NA	2047977	2065219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2060952_2061040_2061870_2062009_2062496_2062601_2062971_2063054_2064271
WTC11_00035060	chr16	+	237	1	FSM	ENSG00000200059.1	ENST00000363189.1	100	1	-214	77	-214	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAACGAATTGATCACAG	NA	False	NA	NA	False	AAAACA	-42	NA	2131636	2131873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2131600_2131900
WTC11_00035061	chr16	+	1865	8	FSM	ENSG00000167965.18	ENST00000568542.5	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	180.9963355137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGATGTTGCTCGGGAAG	2205245	True	NA	4	True	AATAAA	-13	NA	2205256	2209393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206060_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00035062	chr16	+	1640	9	NIC	ENSG00000167965.18	novel	1691	9	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	207.259763039042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGATGTTGCTCGGGAA	2203774	False	NA	3	True	AATAAA	-12	NA	2205783	2209392	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2205876_2206030_2206215_2206360_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
WTC11_00035063	chr16	+	1646	7	FSM	ENSG00000167965.18	ENST00000563067.5	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_5	65.7150836735541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	2205647	False	NA	-19	True	GGGGCT	-9	NA	2206028	2209370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208614_2208758
WTC11_00035065	chr16	+	1457	6	FSM	ENSG00000162062.15	ENST00000565716.1	1457	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	89.5222877276938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2460814	False	NA	17	True	ATTAAA	-17	NA	2460936	2464963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464153
WTC11_00035067	chr16	+	1171	9	NIC	ENSG00000162066.16	novel	3172	11	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	58.88534940883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGGCCGCCCTGGAGGC	2517574	True	NA	-25	True	NA	NA	NA	2520366	2529680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2520542_2520768_2520906_2520983_2521124_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
WTC11_00035068	chr16	+	1052	7	NIC	ENSG00000140992.19	novel	1729	12	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	21.9241115365405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTTTGGGTTGACTCG	2536746	True	NA	NA	False	ATTAAA	-17	NA	2538034	2571338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2571073
WTC11_00035071	chr16	+	8982	16	NNC	ENSG00000167978.17	novel	9044	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	735.847647274896	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2717012	True	NA	15	True	AATAAA	-16	NA	2752661	2771410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2762337_2762369_2768262_2768996_2769285_2770351_2770466_2770606_2770718_2770857
WTC11_00035072	chr16	+	10033	14	NIC	ENSG00000167978.17	novel	9044	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	171	junction_12	640.622949412218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2717064	True	NA	15	True	AATAAA	-16	NA	2752713	2771410	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2770466_2770603_2770718_2770857
WTC11_00035074	chr16	+	1903	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	-320	0	-320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	3012591	False	NA	NA	False	AATAAA	-17	NA	3012602	3014505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3012600_3014500
WTC11_00035075	chr16	+	688	7	FSM	ENSG00000008517.19	ENST00000530538.6	674	7	-14	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.66874967458085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGACCCCTCCCTCAG	3065489	True	NA	NA	False	AATGAA	-41	NA	3065638	3069396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065688_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
WTC11_00035076	chr16	+	410	1	FSM	ENSG00000168124.2	ENST00000304646.2	942	1	-12	544	-12	-544	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGATGACCCATCAGC	NA	False	NA	NA	False	NA	NA	NA	3204234	3204644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3204200_3204600
WTC11_00035077	chr16	+	3362	5	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-90	101	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	17.2481883106603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGTCAGGAAGATGCTG	3281451	True	NA	NA	False	NA	NA	NA	3283394	3291561	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3289392
WTC11_00035078	chr16	+	2328	4	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	224	-11	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	34.6538437823121	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACATAAATGTCTGTGA	3282235	False	NA	NA	False	AATAAA	-9	NA	3284178	3291449	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3284206_3286022_3286150_3288453_3288571_3289392
WTC11_00035083	chr16	+	367	3	NIC	ENSG00000122390.19	novel	326	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	9.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442967	True	NA	NA	False	AATAAA	-17	NA	3443716	3450165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3443828_3448470_3448541_3449979
WTC11_00035084	chr16	+	337	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	-11	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442973	True	NA	NA	False	AATAAA	-17	NA	3443722	3450165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443828_3448470_3448541_3450003
WTC11_00035085	chr16	+	1721	4	ISM	ENSG00000213918.11	ENST00000570769.5	2732	12	24	5981	24	0	5prime_fragment	FALSE	canonical	3	8	junction_3	6.34209919681348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTTCCTTCTGGCAG	3610904	True	NA	NA	False	NA	NA	NA	3611751	3652114	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_3612007_3640714_3641238_3642891_3643037_3651316
WTC11_00035086	chr16	+	953	8	FSM	ENSG00000213918.11	ENST00000576050.5	965	8	12	0	12	0	multi-exon	FALSE	canonical	2	6	junction_1	16.3943743462226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCACAGCCACATGAG	NA	False	NA	NA	False	NA	NA	NA	3642891	3657827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3643037_3654960_3655045_3655372_3655521_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719
WTC11_00035087	chr16	+	7396	10	FSM	ENSG00000213918.11	ENST00000407479.5	8552	10	0	1156	0	590	multi-exon	TRUE	canonical	2	6	junction_1	14.0554457615387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCAGGTGACGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	3642937	3664316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3643037_3654960_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719_3657817_3657905
WTC11_00035088	chr16	+	1346	9	FSM	ENSG00000213918.11	ENST00000246949.10	1346	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	11.5913491449443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTCAGTCCTTCT	NA	False	NA	32	True	AATAAA	-23	NA	3654690	3658095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719_3657817_3657905
WTC11_00035094	chr16	+	6371	16	FSM	ENSG00000103184.12	ENST00000251170.12	6445	16	74	0	74	0	multi-exon	TRUE	canonical	1	2	junction_9	3.83782345723313	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTTT	4958335	True	NA	14	True	NA	NA	NA	4958403	5019157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4958446_4959272_4959387_4987556_4987707_4988148_4988281_4990766_4990896_4991837_4992031_4996347_4996461_4996854_4997045_5000654_5000744_5000854_5000926_5003401_5003574_5005913_5006049_5007351_5007487_5008420_5008649_5011094_5011274_5014858
WTC11_00035095	chr16	+	585	5	FSM	ENSG00000033011.14	ENST00000586840.1	582	5	-3	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_3	128.196138787407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACCTGAACCTGTGTGT	5068484	True	NA	NA	False	NA	NA	NA	5071818	5077469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075397_5075537_5077444
WTC11_00035099	chr16	+	1147	1	FSM	ENSG00000140650.13	ENST00000613908.1	644	1	-384	-119	-384	119	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGTGGGGCAGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	8859428	8860575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8859400_8860600
WTC11_00035100	chr16	+	1099	2	FSM	ENSG00000140650.13	ENST00000684347.1	1099	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCTGTAAAGAAACAGACA	NA	False	NA	NA	False	AATAAA	-42	NA	8859946	8862534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8860537_8862025
WTC11_00035101	chr16	+	469	2	FSM	ENSG00000261481.1	ENST00000570290.1	498	2	29	0	29	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATTTACTTGAGGCC	8869240	True	NA	NA	False	AATAAA	-14	NA	8869279	8870032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8869329_8869612
WTC11_00035102	chr16	+	3555	5	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	179	2	NA	NA	-120224	0	intron_retention	FALSE	canonical	3	18	junction_2	21.7987958383026	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	9672182	True	NA	-22	True	NA	NA	NA	9674412	9810726	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_9674462_9701069_9701257_9794521_9794723_9805478_9805525_9807654
WTC11_00035103	chr16	+	529	3	NNC	ENSG00000287830.1	novel	1797	2	NA	NA	811	39	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	NA	False	NA	17	True	AATAAA	-20	NA	9809666	9810765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_9809761_9810256_9810392_9810465
WTC11_00035104	chr16	+	1147	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	73.7093055753143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740779	True	NA	22	True	AATAAA	-16	NA	10743841	10769351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10769046
WTC11_00035105	chr16	+	2359	1	FSM	ENSG00000274038.1	ENST00000615581.1	479	1	-943	-937	-943	937	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAGAGAGTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	11055612	11057971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11055600_11058000
WTC11_00035106	chr16	+	203	1	FSM	ENSG00000263179.1	ENST00000571636.1	900	1	422	275	422	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCCGGAAAAAATGGAAAA	NA	False	NA	NA	False	GATAAA	-26	NA	11243074	11243277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11243100_11243300
WTC11_00035107	chr16	+	852	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	-50	6	-50	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGAGTTCCGAGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	11797417	11798269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11797400_11798300
WTC11_00035108	chr16	+	1172	8	FSM	ENSG00000048471.14	ENST00000564111.5	2248	8	14	1062	14	354	multi-exon	FALSE	canonical	1	2	junction_3	0.989743318610787	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTGTGTAAGGTG	11976114	True	NA	NA	False	NA	NA	NA	11976758	12052222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846
WTC11_00035109	chr16	+	6775	11	FSM	ENSG00000175595.16	ENST00000311895.8	6764	11	-11	0	5	0	multi-exon	FALSE	canonical	1	5	junction_8	12.7451951730839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTGTTTAATTCAT	13918599	True	NA	9	True	AATAAA	-28	NA	13920142	13952348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145_13935744_13937765_13937859_13944722_13944836_13947613
WTC11_00035110	chr16	+	8997	17	NNC	ENSG00000186260.17	novel	8804	17	NA	NA	-152	0	intron_retention	TRUE	canonical	2	8	junction_1	16.0618920118397	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	14071126	False	NA	7	True	AATAAA	-16	NA	14071166	14266773	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14071407_14079289_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
WTC11_00035113	chr16	+	3967	1	FSM	ENSG00000276564.1	ENST00000618736.1	2403	1	-1572	8	-1572	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAGATAAATGTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	14149260	14153227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14149300_14153200
WTC11_00035115	chr16	+	1850	8	NNC	ENSG00000224712.12	novel	954	7	NA	NA	386	-534	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	87.6158125696777	137	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAGAATGGAAAGGTGC	NA	False	NA	NA	False	NA	NA	NA	14712074	14725759	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14712606_14716067_14716197_14719826_14719927_14720089_14720235_14723191_14723300_14724317_14724379_14724487_14724524_14725019
WTC11_00035116	chr16	+	7776	38	NNC	ENSG00000183458.14	novel	6919	32	NA	NA	-125	15931	intron_retention	FALSE	canonical	3	60	junction_8	106.215542257679	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTCTTCAGGATTGCCC	NA	False	NA	NA	False	NA	NA	NA	14911425	14951639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14911908_14917539_14917612_14917732_14917805_14918072_14918243_14918454_14919127_14919244_14919429_14919862_14920084_14920271_14920388_14920797_14920925_14921279_14921528_14922000_14922757_14923654_14923787_14923976_14924153_14924504_14924639_14925732_14925877_14926003_14926284_14926376_14926591_14926656_14926817_14927206_14927360_14928380_14928526_14929250_14929422_14929519_14929714_14930165_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950822_14951614
WTC11_00035118	chr16	+	748	6	NIC	ENSG00000166780.11	novel	737	6	NA	NA	23	2860	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	56.2160119538909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGATCCTGTTATCACTT	NA	False	NA	NA	False	AATAAA	-16	NA	15434497	15591119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15591029
WTC11_00035119	chr16	+	6060	9	FSM	ENSG00000072864.16	ENST00000674588.1	5693	9	-257	-110	-237	110	multi-exon	FALSE	canonical	2	5	junction_7	23.0108669980077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGGCGTGAGCCCGACC	NA	False	NA	NA	False	NA	NA	NA	15649970	15734572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15724190_15727001_15732484
WTC11_00035120	chr16	+	3292	10	ISM	ENSG00000072864.16	ENST00000675926.1	2550	11	26	6597	10	-3	5prime_fragment	FALSE	canonical	1	1	junction_1	23.4994089760194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAAGGGTTTTTTTTCT	15648500	True	NA	15	True	AATAAA	-17	NA	15650272	15726350	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_15650295_15651930_15652051_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
WTC11_00035122	chr16	+	6360	30	NIC	ENSG00000103222.20	novel	6504	31	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	3	23	junction_12	48.203517221596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATATATTTTATTTCT	15949441	True	NA	9	True	AGTAAA	-13	NA	15949606	16143047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
WTC11_00035123	chr16	+	1983	16	ISM	ENSG00000103226.19	ENST00000678080.1	3883	22	24	11220	9	-180	5prime_fragment	FALSE	canonical	3	75	junction_12	380.861911400386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGGAAGGATTGATG	NA	False	NA	NA	False	NA	NA	NA	16232578	16267132	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043
WTC11_00035124	chr16	+	2287	15	ISM	ENSG00000103226.19	ENST00000678148.1	3834	28	25968	-10	4987	0	3prime_fragment	FALSE	canonical	3	555	junction_6	227.838837150925	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	16270119	16294810	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
WTC11_00035125	chr16	+	7726	36	Fusion	ENSG00000244257.5_ENSG00000214967.5	novel	6805	32	NA	NA	-260	-1537	intron_retention	TRUE	canonical	0	0	junction_32	111.795856226373	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCCCCACCCAGTGGGG	NA	False	NA	NA	False	AAAACA	-3	NA	16310080	16392271	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_16310563_16316190_16316263_16316383_16316456_16316723_16316894_16317105_16317778_16317895_16318080_16318513_16318735_16318922_16319039_16319448_16319576_16319930_16320179_16320651_16321408_16322305_16322438_16322627_16322804_16323155_16323290_16324383_16324528_16324654_16324935_16325027_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16327907_16328004_16328808_16328987_16329241_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333885_16340305_16340435_16344044_16344145_16344307_16344352_16387705_16387807_16390766_16390875_16391890_16391952_16392060
WTC11_00035126	chr16	+	1573	7	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	-131	18500	-131	-18500	5prime_fragment	FALSE	canonical	1	3	junction_6	53.3023347414434	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGACCCCTGATGCCT	NA	False	NA	NA	False	NA	NA	NA	16356092	16359007	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16356296_16356416_16356489_16356756_16356927_16357138_16357811_16357928_16358113_16358547_16358769_16358956
WTC11_00035127	chr16	+	821	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	3907	16083	3907	-16083	internal_fragment	FALSE	canonical	3	43	junction_1	0	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCCAGTGGTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	16360130	16361424	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16360208_16360680
WTC11_00035128	chr16	+	557	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	12245	8355	12245	-8355	internal_fragment	FALSE	canonical	3	205	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTGCTGCCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	16368468	16369152	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16368816_16368942
WTC11_00035129	chr16	+	239	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	13444	7211	13444	-7211	internal_fragment	FALSE	canonical	3	160	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGATGGCCCCACATG	NA	False	NA	NA	False	NA	NA	NA	16369667	16370296	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16369756_16370145
WTC11_00035131	chr16	+	883	2	Antisense	novelGene_ENSG00000261362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATCCGTATCTGTAATG	NA	False	NA	NA	False	NA	NA	NA	16535093	16572168	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_16535125_16571316
WTC11_00035134	chr16	+	2524	14	FSM	ENSG00000103544.16	ENST00000513947.8	2501	14	-23	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	51.1658169914482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	19551495	True	NA	NA	False	NA	NA	NA	19555702	19618081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685
WTC11_00035135	chr16	+	503	7	FSM	ENSG00000103544.16	ENST00000535164.5	564	7	61	0	41	0	multi-exon	FALSE	canonical	1	2	junction_4	175.520574925626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTCCCCTTGTACCCG	NA	False	NA	NA	False	NA	NA	NA	19601663	19616740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19611727_19611799_19616113_19616192_19616685
WTC11_00035136	chr16	+	700	9	ISM	ENSG00000174628.16	ENST00000320394.10	3482	10	1986	1948	26	-122	3prime_fragment	FALSE	canonical	3	15	junction_4	8.49632273398321	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCAAGATGAAAATTCCA	19717882	False	NA	NA	False	NA	NA	NA	19718441	19856519	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
WTC11_00035138	chr16	+	2612	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_7	12.998100525998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805694	True	NA	11	True	AATAAA	-20	NA	20806512	20849665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
WTC11_00035139	chr16	+	2741	15	NIC	ENSG00000005189.20	novel	2691	20	NA	NA	-6212	-2	intron_retention	FALSE	canonical	3	12	junction_3	8.68026144626475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGGGATGTCCACAG	20814006	False	NA	9	True	AATAAA	-18	NA	20814824	20849663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_20815054_20816115_20816213_20821761_20821903_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
WTC11_00035142	chr16	+	1652	4	NIC	ENSG00000011638.11	novel	1812	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	12	junction_3	36.5786823163438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156640	True	NA	30	True	AATAAA	-27	NA	21158706	21180616	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_21158747_21160977_21161279_21170436_21170606_21179474
WTC11_00035143	chr16	+	565	6	FSM	ENSG00000140740.11	ENST00000565331.5	565	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	423.779470951579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCAATAAAACATATTTT	21938762	True	NA	NA	False	NA	NA	NA	21953386	21965505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21953457_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407
WTC11_00035144	chr16	+	582	4	FSM	ENSG00000103319.12	ENST00000563555.1	610	4	0	28	0	-28	multi-exon	FALSE	canonical	3	47	junction_2	8.99382504215469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAACAAGTAAATTAATA	22257630	True	NA	NA	False	AATGAA	-42	NA	22257643	22263294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22257771_22258493_22258696_22260461_22260530_22263109
WTC11_00035146	chr16	+	2560	21	NNC	ENSG00000058600.16	novel	3690	21	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_19	46.960488711256	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGGTTTAATATTT	22293613	True	NA	13	True	AATAAA	-32	NA	22297454	22334021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332068_22332186_22333643
WTC11_00035147	chr16	+	6676	29	NNC	ENSG00000237296.10	novel	4223	29	NA	NA	-5995	44257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	108.133061218905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	NA	False	NA	NA	False	AATAAA	-33	NA	22469041	22536477	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22469196_22471627_22471853_22474124_22474227_22474948_22475219_22478690_22478822_22478975_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491826_22513519_22513601_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625_22534033_22534056
WTC11_00035148	chr16	+	5708	23	FSM	ENSG00000243716.11	ENST00000415654.5	5708	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	117.211726559143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTGCAGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	22479120	22536513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491827_22513521_22513601_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
WTC11_00035152	chr16	+	8256	23	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	6	0	combination_of_known_splicesites	TRUE	canonical	3	8	junction_5	80.3088691416453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24723194	True	NA	42	True	AATAAA	-19	NA	24729656	24826221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24778343_24778469_24789231_24791818_24794543_24794720_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
WTC11_00035154	chr16	+	2955	1	FSM	ENSG00000274925.1	ENST00000612792.1	3115	1	106	54	106	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTGCAGGTTGCTGG	25257923	True	NA	-47	True	NA	NA	NA	25258057	25261012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25258100_25261000
WTC11_00035156	chr16	+	6753	29	NIC	ENSG00000047578.14	novel	6599	28	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	9.68140443513929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	27548894	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27654607_27654737_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
WTC11_00035159	chr16	+	5051	5	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	-89	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	234.144186346789	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	28292420	False	NA	19	True	AATAAA	-20	NA	28292435	28323849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28322918_28322941
WTC11_00035160	chr16	+	4940	6	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	239.405096019279	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	28288776	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28321183_28321202_28322918_28322943
WTC11_00035161	chr16	+	557	1	FSM	ENSG00000271623.1	ENST00000603787.1	634	1	-398	475	-398	-475	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCGCTGGGCGCCAACGA	NA	False	NA	NA	False	NA	NA	NA	28364301	28364858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28364300_28364900
WTC11_00035162	chr16	+	508	3	FSM	ENSG00000255524.8	ENST00000526428.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTATTACCCACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	28652233	28656948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28652365_28656462_28656524_28656632
WTC11_00035164	chr16	+	3970	24	NIC	ENSG00000168488.19	novel	3788	23	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	25	junction_23	182.708368243184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28822754	False	NA	19	True	AATAAA	-26	NA	28823034	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832186_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836750
WTC11_00035165	chr16	+	3875	24	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_10	169.259747145565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822754	False	NA	24	True	AATAAA	-31	NA	28823034	28837237	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832186_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
WTC11_00035166	chr16	+	3955	24	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_22	152.577935708373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTAACTTAACCTG	28822824	False	NA	8	True	AATAAA	-15	NA	28823097	28837221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836486_28836727
WTC11_00035169	chr16	+	2917	17	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	80	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_15	156.12810245116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28829845	False	NA	19	True	AATAAA	-26	NA	28829857	28837232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
WTC11_00035171	chr16	+	638	4	FSM	ENSG00000176953.13	ENST00000562977.1	638	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	112.392170545817	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACAGAGACGTCCCAAC	28944882	True	NA	NA	False	NA	NA	NA	28951006	28959018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28951399_28952131_28952205_28958716_28958862_28958990
WTC11_00035172	chr16	+	441	5	FSM	ENSG00000169682.18	ENST00000561868.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	263.483396061308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGACCGGAGTCCTG	28975472	False	NA	NA	False	NA	NA	NA	28975501	28982375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975558_28979154_28979307_28979404_28979472_28981469_28981616_28982355
WTC11_00035175	chr16	+	261	3	ISM	ENSG00000284671.1	ENST00000566038.1	1611	15	12279	9866	12279	-9866	internal_fragment	FALSE	canonical	3	66	junction_2	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGATTCCACGGAAG	NA	False	NA	NA	False	AAGAAA	-20	NA	29087300	29094296	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29087404_29090739_29090839_29094237
WTC11_00035176	chr16	+	555	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	-139	2	-139	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCTCTTTCTTGTGCAC	NA	False	NA	NA	False	AATAAA	-13	NA	29467021	29467576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29467000_29467600
WTC11_00035177	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	29810524	True	NA	5	True	AATAAA	-16	NA	29812240	29815880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812352_29812989
WTC11_00035179	chr16	+	2798	15	FSM	ENSG00000013364.19	ENST00000357402.10	2798	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.37974369781684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAATTTCAACACTTTT	29820451	False	NA	10	True	AATACA	-18	NA	29820461	29848021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29820511_29830514_29830675_29830877_29831074_29833732_29833857_29833934_29834067_29835703_29835799_29836721_29836959_29840177_29840460_29841595_29841841_29841914_29842113_29844492_29844880_29845862_29845980_29846157_29846285_29847196_29847386_29847761
WTC11_00035180	chr16	+	2851	15	NIC	ENSG00000013364.19	novel	548	4	NA	NA	-3608	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.37974369781684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTCTCTTGTCTGACA	29825993	False	NA	23	True	AATACA	-31	NA	29826003	29848034	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29826093_29830514_29830675_29830877_29831074_29833732_29833857_29833934_29834067_29835703_29835799_29836721_29836959_29840177_29840460_29841595_29841841_29841914_29842113_29844492_29844880_29845862_29845980_29846157_29846285_29847196_29847386_29847761
WTC11_00035181	chr16	+	2111	12	FSM	ENSG00000285043.3	ENST00000566897.6	2448	12	337	0	126	0	multi-exon	FALSE	canonical	1	1	junction_1	5031.57425211488	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGGCCGTCCGTGTCTTG	30053313	False	NA	20	True	AATAAA	-17	NA	30053463	30070413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30053500_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00035183	chr16	+	807	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	11256	junction_2	244.835999531659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30069038	False	NA	21	True	AATAAA	-18	NA	30069255	30070414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
WTC11_00035184	chr16	+	1259	8	NIC	ENSG00000149923.14	novel	941	8	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	534	junction_4	1175.59853622202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTCTAATAAAAGAAGAAA	30055655	True	NA	82	True	GATAAA	-24	NA	30076014	30085350	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
WTC11_00035186	chr16	+	555	1	FSM	ENSG00000278887.2	ENST00000624024.1	418	1	-139	2	-139	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCTCTTTCTTGTGCAC	NA	False	NA	NA	False	AATAAA	-13	NA	30206370	30206925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30206400_30206900
WTC11_00035187	chr16	+	1200	4	Antisense	novelGene_ENSG00000198064.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	232	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGTGGAAGGGGAGTGA	NA	False	NA	NA	False	NA	NA	NA	30222901	30224870	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_30223457_30223582_30223778_30224029_30224156_30224546
WTC11_00035189	chr16	+	374	2	FSM	ENSG00000260219.3	ENST00000688695.1	853	2	-19	498	-17	-486	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAACCCAGGAAGAGCT	30355759	False	NA	NA	False	NA	NA	NA	30355878	30356618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30356000_30356365
WTC11_00035190	chr16	+	370	1	FSM	ENSG00000274653.1	ENST00000611264.1	512	1	168	-26	168	26	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTCTATTCACTCAGC	30359797	False	NA	NA	False	NA	NA	NA	30359992	30360362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30360000_30360400
WTC11_00035191	chr16	+	232	1	FSM	ENSG00000278922.1	ENST00000624451.1	1377	1	63	1082	63	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCGAGGTCCTTGAGCCT	30526951	False	NA	NA	False	NA	NA	NA	30526980	30527212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30527000_30527200
WTC11_00035192	chr16	+	379	2	FSM	ENSG00000156860.16	ENST00000498588.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATCCGGGTCTGACGAA	30659845	False	NA	NA	False	NA	NA	NA	30659917	30660581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30659978_30660262
WTC11_00035193	chr16	+	10353	33	NNC	ENSG00000282034.1	novel	11692	31	NA	NA	-5477	-5045	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	16.4007431234075	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCCGCGTAAGGAGGC	30696855	True	NA	74	True	AATAAA	-15	NA	30698589	30740124	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_30698762_30699907_30699982_30700615_30700879_30704063_30704316_30707182_30707369_30707571_30707713_30709512_30709736_30709850_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30721188_30721477_30722121_30722287_30722962_30723230_30723583_30725083_30728965_30729232_30729369_30729573_30733279_30733450_30733601_30733799_30733893_30734009_30734495_30734616_30736199_30736395_30736540_30736625_30737048
WTC11_00035194	chr16	+	1234	3	FSM	ENSG00000260083.3	ENST00000565573.2	1258	3	0	24	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTACATTACTTAAAT	30875412	False	NA	-8	True	NA	NA	NA	30875778	30895196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30876119_30888713_30888959_30894547
WTC11_00035195	chr16	+	1599	2	ISM	ENSG00000150281.7	ENST00000395019.3	1617	3	2776	-9	2776	9	3prime_fragment	FALSE	canonical	2	6	junction_1	0	1105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTTGTATATATAGTTG	30899321	False	NA	5	True	AATAAA	-28	NA	30899413	30903556	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30899534_30902077
WTC11_00035196	chr16	+	1093	2	FSM	ENSG00000167395.10	ENST00000428260.1	1077	2	-16	0	4	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCAGTGTGGCAAGAC	31072931	True	NA	NA	False	NA	NA	NA	31074426	31077044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31074721_31076245
WTC11_00035197	chr16	+	5837	3	NIC	ENSG00000167395.10	novel	6892	3	NA	NA	4	-962	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGGCCTGCAGACCTC	31072931	True	NA	NA	False	NA	NA	NA	31074426	31083057	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31074721_31076245_31081702_31082970
WTC11_00035198	chr16	+	1716	11	FSM	ENSG00000103507.14	ENST00000567530.5	1796	11	80	0	-12	0	multi-exon	FALSE	canonical	1	12	junction_7	213.000093896693	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTGTTATTAAAGTTCA	31101422	True	NA	-16	True	NA	NA	NA	31108373	31112533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31111090_31111220_31111299_31111390_31111868_31112028_31112120
WTC11_00035201	chr16	+	1192	6	NNC	ENSG00000197302.11	novel	2924	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	45.0714987547563	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGCACCAGAATCCT	31710616	True	NA	9	True	AATAAA	-14	NA	31713272	31759886	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_31713436_31718912_31719054_31722625_31722753_31723257_31723354_31753765_31753901_31759356
WTC11_00035206	chr16	+	3046	3	FSM	ENSG00000279249.3	ENST00000662771.1	3046	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAACAAAATGAGTGAT	49281886	True	NA	NA	False	AATAAA	-9	NA	49282036	49290460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_49282233_49287366_49287476_49287719
WTC11_00035207	chr16	+	1258	5	FSM	ENSG00000279249.3	ENST00000659529.1	1252	5	-6	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	3.19178633370093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGGATTGGAACATT	49281911	True	NA	NA	False	ATTAAA	-15	NA	49282061	49290362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_49282233_49285482_49285624_49287366_49287476_49289443_49289656_49289737
WTC11_00035211	chr16	+	3451	18	NNC	ENSG00000083799.18	novel	3536	18	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	17.3851147402849	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGACCAAGGATATGAAA	50740843	True	NA	-2	True	AATAAA	-12	NA	50742168	50796876	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_50742217_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779694_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
WTC11_00035216	chr16	+	4635	23	NIC	ENSG00000103479.17	novel	4854	22	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_22	56.8629823376384	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTTGGTTATATTG	53431042	True	NA	9	True	AATAAA	-15	NA	53434476	53491648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129_53490302_53490514
WTC11_00035217	chr16	+	4807	22	NNC	ENSG00000103479.17	novel	4854	22	NA	NA	23	0	intron_retention	FALSE	canonical	3	15	junction_3	87.5718040334787	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTTGGTTATATTG	53431059	True	NA	9	True	AATAAA	-15	NA	53434493	53491648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_53434797_53439015_53439147_53442657_53442859_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53465770_53465812_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129
WTC11_00035221	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	193.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	56650475	True	NA	17	True	ATTAAA	-17	NA	56658011	56659305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56658087_56658674_56658783_56659072
WTC11_00035229	chr16	+	3670	11	NNC	ENSG00000159618.16	novel	504	3	NA	NA	-13272	0	intron_retention	FALSE	canonical	3	49	junction_3	7.87718223732319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACTGGTATTATCATT	57529347	False	NA	20	True	AATAAA	-32	NA	57529370	57577189	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_57529420_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57570417_57570536_57574814
WTC11_00035230	chr16	+	1656	11	FSM	ENSG00000159618.16	ENST00000394361.8	1656	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	23.0054341406547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCACTGTGACCGCCAAG	57542611	False	NA	NA	False	NA	NA	NA	57542653	57575639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57542702_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57574814_57575093_57575437
WTC11_00035231	chr16	+	3324	12	FSM	ENSG00000159618.16	ENST00000349457.8	3335	12	11	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	18.0623346742412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACTGGTATTATCATT	57542611	False	NA	20	True	AATAAA	-32	NA	57542653	57577189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57542702_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57570417_57570536_57574814_57575093_57575437
WTC11_00035234	chr16	+	2741	20	NIC	ENSG00000140854.13	novel	827	9	NA	NA	-93	0	intron_retention	FALSE	canonical	0	0	junction_16	108.120943873771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57736655	False	NA	11	True	ATTAAA	-13	NA	57736669	57757244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_57736879_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
WTC11_00035243	chr16	+	1280	7	NIC	ENSG00000103037.12	novel	6256	8	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	6	junction_5	50.4711138507298	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTAATACTCATTGATG	58513067	False	NA	0	True	NA	NA	NA	58515542	58519073	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_58515565_58515790_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518400_58518544_58518723
WTC11_00035244	chr16	+	1433	7	NIC	ENSG00000103037.12	novel	2042	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	2	6	junction_5	51.7719357696169	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTAATACTCATTGATG	58513068	False	NA	0	True	NA	NA	NA	58515543	58519073	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518400_58518544_58518723
WTC11_00035246	chr16	+	1237	8	NIC	ENSG00000103037.12	novel	2042	9	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	46.7572978042913	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTAATACTCATTGATG	58515776	False	NA	0	True	NA	NA	NA	58515790	58519073	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518180_58518232_58518400_58518544_58518723
WTC11_00035256	chr16	+	855	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	-23	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	61.9273768215641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223986	True	NA	25	True	AATAAA	-15	NA	67227144	67229278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
WTC11_00035265	chr16	+	3022	1	FSM	ENSG00000263276.1	ENST00000571975.1	3022	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCCCAGCAGAAACT	NA	False	NA	NA	False	NA	NA	NA	68224712	68227734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68224700_68227700
WTC11_00035266	chr16	+	5423	14	FSM	ENSG00000103064.15	ENST00000648130.1	5418	14	-5	0	2	0	multi-exon	TRUE	canonical	2	4	junction_5	45.0224138788592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAATAAATTCTTTTTG	68262683	True	NA	-23	True	NA	NA	NA	68264517	68301793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287322_68287436_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233_68297477_68298490
WTC11_00035283	chr16	+	3089	12	FSM	ENSG00000168872.17	ENST00000569771.5	3067	12	-22	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	168.68225300647	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGTGTGTGTATATAAAGT	70340770	True	NA	14	True	AATATA	-16	NA	70346860	70373381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361637_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
WTC11_00035294	chr16	+	2359	7	NNC	ENSG00000171724.3	novel	3791	9	NA	NA	48	697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.974273707223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTAGTCAGTCTCCTT	77787091	True	NA	4	True	AATAAA	-7	NA	77788611	77883105	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77881699
WTC11_00035301	chr16	+	2312	15	NIC	ENSG00000197943.11	novel	2892	20	NA	NA	354	787	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	9.25709876532709	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTTCTGCATACCC	81786074	False	NA	NA	False	AATAAA	-28	NA	81786099	81907171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_81786183_81854443_81854588_81858262_81858357_81859115_81859164_81869213_81869299_81870851_81870936_81880909_81880954_81883268_81883342_81889171_81889274_81891471_81891591_81893708_81893795_81895806_81895928_81900611_81900781_81905402_81905508_81906216
WTC11_00035302	chr16	+	4398	1	FSM	ENSG00000103150.7	ENST00000569024.1	4489	1	105	-14	105	14	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTAGTGGTGGTC	NA	False	NA	31	True	AGTAAA	-32	NA	83911787	83916185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_83911800_83916200
WTC11_00035322	chr16	+	752	6	NIC	ENSG00000167515.10	novel	558	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	453.51807020228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846144	True	NA	16	True	ACTAAA	-16	NA	88857135	88861112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88857184_88858641_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860913
WTC11_00035323	chr16	+	565	5	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	410.739196449523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846165	True	NA	16	True	ACTAAA	-16	NA	88857156	88861112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88857184_88858618_88858790_88859662_88859751_88859892_88859973_88860913
WTC11_00035328	chr16	+	573	4	FSM	ENSG00000170100.14	ENST00000564906.5	568	4	-5	0	2	0	multi-exon	FALSE	canonical	2	4	junction_1	11.0252236056942	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGCTGCCACCGTCCT	89216253	True	NA	NA	False	NA	NA	NA	89217704	89223282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89217911_89221003_89221153_89222091_89222184_89223156
WTC11_00035329	chr16	+	7101	7	NNC	ENSG00000170100.14	novel	11192	7	NA	NA	2	-4008	intron_retention	FALSE	canonical	2	4	junction_1	13.0053407832663	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCTCGCACTGCGTAT	89216253	True	NA	NA	False	NA	NA	NA	89217704	89233063	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89217911_89221003_89221153_89222091_89222184_89223156_89223280_89224718_89224803_89225554_89225632_89226693
WTC11_00035332	chr16	+	655	3	ISM	ENSG00000178773.15	ENST00000268720.9	2657	17	14	18208	0	-4676	5prime_fragment	FALSE	canonical	3	8	junction_2	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACTTTGGAAGTCCGA	89573490	True	NA	NA	False	NA	NA	NA	89575781	89579038	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89576072_89577538_89577722_89578856
WTC11_00035333	chr16	+	2702	6	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	-708	0	intron_retention	FALSE	canonical	3	70	junction_5	24.6056903987675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	NA	False	NA	14	True	AATAAA	-20	NA	89588095	89597246	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89596352_89596483
WTC11_00035339	chr16	+	1868	16	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_3	80.1036550698878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	89883246	True	NA	30	True	TATAAA	-14	NA	89883396	89911379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89883513_89884581_89884657_89885847_89885967_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
WTC11_00035347	chr16	-	2785	4	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	684	289	intron_retention	FALSE	canonical	3	135	junction_1	55.6496980125579	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAACCAACAGTGTGCT	NA	False	NA	NA	False	AATAAA	-8	NA	17384	14091	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_16449_16540_16739_16915_17052_17290
WTC11_00035348	chr16	-	1304	9	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	86	148	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	83.4347611910048	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGAGGCCACACAGCT	NA	False	NA	NA	False	NA	NA	NA	17982	14232	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14512_14651_14721_15480_15634_16289_16449_16540_16739_16915_17052_17290_17428_17603_17751_17956
WTC11_00035349	chr16	-	2873	17	ISM	ENSG00000007384.15	ENST00000262316.10	2992	18	7592	0	0	0	3prime_fragment	FALSE	canonical	1	57	junction_2	47.4433461483273	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	-65028	False	NA	-7	True	AATAAA	-35	NA	65039	58058	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898
WTC11_00035350	chr16	-	2754	17	FSM	ENSG00000007384.15	ENST00000428730.5	2751	17	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_14	63.2677840610844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	-65028	False	NA	-7	True	AATAAA	-35	NA	65039	58058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63064_63586_63801_64698_64830_64898
WTC11_00035352	chr16	-	1594	9	NNC	ENSG00000103148.17	novel	936	8	NA	NA	55	-1321	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	54.4172249843742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTCTCACTATATTGC	-137777	False	NA	1	True	AATAAA	-16	NA	138611	94579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_94906_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149
WTC11_00035354	chr16	-	1358	11	NIC	ENSG00000007392.17	novel	1520	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	222.453792954852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	-229339	False	NA	-20	True	AATACA	-23	NA	229374	189097	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
WTC11_00035355	chr16	-	772	11	FSM	ENSG00000076344.16	ENST00000481672.5	772	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.26190128606002	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGCCCACTGGGTCA	-274219	False	NA	NA	False	NA	NA	NA	274273	270646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_270662_270743_270832_270983_271100_271201_271316_271398_271461_271539_271570_272862_272932_273474_273557_273759_273837_274042_274102_274213
WTC11_00035356	chr16	-	2706	10	NNC	ENSG00000103126.15	novel	3707	11	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_7	98.3327683599589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	-349372	True	NA	-1	True	AATAAA	-18	NA	352666	287439	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_288249_289439_289608_291189_291298_293487_293719_297055_297227_297721_298252_304303_304457_309972_310070_314542_314684_352368
WTC11_00035357	chr16	-	992	2	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTAAAACGCTCTCCAG	-588895	True	NA	NA	False	AATAAA	-20	NA	589207	587731	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_-_588520_589003
WTC11_00035358	chr16	-	1281	1	FSM	ENSG00000260394.2	ENST00000571933.1	1220	1	-66	5	-26	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACGCCTGATCACACAC	-672701	False	NA	NA	False	AATAAA	-11	NA	679803	678522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_678500_679800
WTC11_00035359	chr16	-	1754	10	NIC	ENSG00000162004.19	novel	1847	13	NA	NA	124	-140	intron_retention	FALSE	canonical	3	7	junction_7	13.2058722441342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCTGGCAGGTGCAGG	-725780	False	NA	NA	False	NA	NA	NA	726243	722764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_725146_725236_725294_725445_725581_725793_725881_725965
WTC11_00035360	chr16	-	1694	11	NIC	ENSG00000162004.19	novel	1831	12	NA	NA	15	-140	intron_retention	FALSE	canonical	3	27	junction_6	8.69770084562581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCTGGCAGGTGCAGG	-726390	False	463	NA	False	NA	NA	NA	726853	722764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_725146_725236_725294_725412_725581_725793_725881_725965_726086_726788
WTC11_00035361	chr16	-	2499	5	NNC	ENSG00000007376.8	novel	587	5	NA	NA	0	-8	intron_retention	FALSE	canonical	3	5	junction_2	102.120027418719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGATGACCGTGAACG	-785271	True	NA	-16	True	AATAAA	-16	NA	788329	784981	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_786929_787076_787242_787353_787478_787555_787745_788255
WTC11_00035364	chr16	-	1022	2	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50696	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	-1418544	True	NA	NA	False	NA	NA	NA	1420747	1369055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419753
WTC11_00035365	chr16	-	943	3	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	-1418544	True	NA	NA	False	NA	NA	NA	1420747	1369055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419753_1420613_1420691
WTC11_00035370	chr16	-	1857	14	FSM	ENSG00000162039.17	ENST00000325962.9	1867	14	0	10	0	-8	multi-exon	FALSE	canonical	1	2	junction_11	11.5717468622411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTCTACAGATTTGAA	-1872062	True	NA	-13	True	AATAAA	-7	NA	1872164	1833995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1834367_1837783_1837871_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
WTC11_00035371	chr16	-	682	5	NNC	ENSG00000140988.16	novel	931	6	NA	NA	0	94595	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23474.298258947	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCATTTTGTTCAGCA	-1963113	False	NA	NA	False	NA	NA	NA	1963256	1867462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1867494_1962061_1962271_1962496_1962657_1962735_1962910_1963148
WTC11_00035372	chr16	-	1905	2	FSM	ENSG00000261790.2	ENST00000654451.1	2040	2	135	0	15	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGAACTGGGCCATGT	-1990280	False	NA	NA	False	NA	NA	NA	1990342	1984890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1986772_1990318
WTC11_00035374	chr16	-	3324	12	NNC	ENSG00000167962.15	novel	3362	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_8	56.1528315926078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	-2007828	True	NA	-7	True	AATAAA	-22	NA	2009764	1997653	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002454_2002520_2002733_2002990_2003121_2003615_2003729_2009523
WTC11_00035375	chr16	-	10999	36	ISM	ENSG00000008710.20	ENST00000262304.9	14140	46	20989	819	-428	0	3prime_fragment	FALSE	canonical	2	3	junction_32	25.7252992287391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTTGGGAAGGACAC	NA	False	NA	NA	False	TTTAAA	-40	NA	2114909	2089526	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046_2092189_2092479_2092593_2092953_2093094_2093543_2093739_2093810_2094014_2094091_2094211_2097147_2097242_2097318_2097504_2097727_2097781_2097867_2097985_2099643_2099771_2099860_2100072_2100165_2100310_2100395_2100567_2102060_2102257_2102380_2102634_2102813_2102971_2103265_2103896_2104497_2104643_2105321_2105475_2105864_2106025_2106090_2106305_2106397_2106678_2106804_2106949_2107882_2108033_2108251_2111872_2112339_2112474_2112787_2112964_2113160_2113293_2114169
WTC11_00035379	chr16	-	995	8	NNC	ENSG00000167969.13	novel	1507	7	NA	NA	0	20556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.42400967145	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	-2251531	False	NA	NA	False	AAAAAG	-1	NA	2251545	2218845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218874_2239899_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
WTC11_00035380	chr16	-	1043	8	NNC	ENSG00000167969.13	novel	1507	7	NA	NA	0	20556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.42400967145	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	-2243571	True	NA	NA	False	AAAAAG	-1	NA	2251587	2218845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218874_2239893_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
WTC11_00035381	chr16	-	2077	9	NNC	ENSG00000205937.12	novel	2069	8	NA	NA	0	34270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1372.54526337021	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	-2267181	False	27273	NA	False	AAAAAG	-1	NA	2267829	2218845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218873_2253115_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267662
WTC11_00035382	chr16	-	948	7	FSM	ENSG00000167969.13	ENST00000562238.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	340.317702873196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCAGCGTTTCATTT	-2243556	True	NA	-25	True	NA	NA	NA	2251572	2239894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243368_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
WTC11_00035387	chr16	-	6321	3	FSM	ENSG00000260565.8	ENST00000568395.2	6366	3	17	28	-3	-7	multi-exon	FALSE	canonical	1	2	junction_2	1.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTAGTGGTCCCCCGGG	-2673133	True	NA	-39	True	NA	NA	NA	2673424	2660388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2663408_2669410_2672571_2673282
WTC11_00035389	chr16	-	1384	6	FSM	ENSG00000005001.10	ENST00000161006.8	1383	6	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_4	4.04969134626332	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTTTCCCATGCC	-2858147	True	NA	-2	True	AATAAA	-16	NA	2858170	2852728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2853330_2853864_2854023_2855573_2855852_2856081_2856254_2856821_2856849_2858022
WTC11_00035390	chr16	-	1391	3	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	15232	intron_retention	FALSE	non_canonical	0	0	junction_1	2013.5	612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGAGGGTAGACTCGG	-2980523	True	NA	NA	False	NA	NA	NA	3018183	2999479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2999505_3014711_3016043_3018148
WTC11_00035392	chr16	-	3962	3	FSM	ENSG00000261971.9	ENST00000570949.5	491	3	-400	-3071	-400	-749	multi-exon	FALSE	canonical	2	3	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATTCATATATATATT	-3057123	False	NA	NA	False	NA	NA	NA	3057613	3051844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3055033_3055735_3055946_3057049
WTC11_00035394	chr16	-	1177	7	NIC	ENSG00000263072.9	novel	1401	6	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	15.7867736482862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGTTTTACCCAGTT	-3134167	True	NA	-17	True	AATGAA	-13	NA	3134827	3125599	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3125967_3129247_3129311_3129460_3129654_3131746_3131922_3132018_3132104_3132849_3132946_3134629
WTC11_00035398	chr16	-	2878	5	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21.540659228538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399453	True	NA	-4	True	AATAAA	-17	NA	3400993	3382084	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3383712_3384458_3384942_3393648_3393815_3397191_3397745_3400944
WTC11_00035399	chr16	-	8831	15	NNC	ENSG00000188827.11	novel	7315	15	NA	NA	444	1550	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	9.60256130797765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGAAAACGGGTCTGTC	-3609891	False	NA	20	True	AATAAA	-35	NA	3611141	3579630	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_3582694_3583096_3583511_3584768_3584872_3589001_3591311_3592698_3592866_3594452_3594600_3595604_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3601192_3602117_3602308_3606473_3606699_3608429_3609567_3611128
WTC11_00035403	chr16	-	1903	3	FSM	ENSG00000262468.7	ENST00000648108.1	1903	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGACTGTGATGTTG	-4252292	False	NA	-20	True	AATAAA	-1	NA	4252322	4246026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4246840_4246972_4247062_4251321
WTC11_00035404	chr16	-	6204	5	FSM	ENSG00000090447.12	ENST00000575320.1	6491	5	288	-1	288	0	multi-exon	FALSE	canonical	3	60	junction_4	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4266885	False	NA	-4	True	AATAAA	-20	NA	4266899	4257185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260596_4261778_4261950_4262323_4262423_4262535
WTC11_00035406	chr16	-	700	1	FSM	ENSG00000262712.1	ENST00000574705.1	1949	1	1209	40	1209	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGCTTTGTCATGAAA	-4336575	False	NA	NA	False	AATAAA	-29	NA	4336609	4335909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4335900_4336600
WTC11_00035410	chr16	-	1439	1	FSM	ENSG00000278434.1	ENST00000612995.1	1455	1	-256	272	-256	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTTCCCTGCTCAGTG	-4532704	False	NA	NA	False	NA	NA	NA	4533926	4532487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4532500_4533900
WTC11_00035411	chr16	-	799	3	FSM	ENSG00000153443.13	ENST00000587615.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	138	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCCTTCGAAGACG	-4609799	True	NA	NA	False	NA	NA	NA	4614872	4609367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609909_4610492_4610556_4614677
WTC11_00035413	chr16	-	2673	17	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_14	38.6279832990282	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	4734383	4696509	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978_4727178_4729979_4730152_4734155
WTC11_00035416	chr16	-	3354	18	NNC	ENSG00000140632.17	novel	3527	18	NA	NA	0	27397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.204330178383	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGTAC	-4832852	True	NA	NA	False	NA	NA	NA	4847271	4775805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4775832_4803202_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00035417	chr16	-	3329	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_7	206.155584450191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832871	True	NA	-1	True	AATAAA	-19	NA	4847290	4803202	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
WTC11_00035418	chr16	-	3081	4	FSM	ENSG00000103174.13	ENST00000564397.5	3286	4	220	-15	220	-13	multi-exon	FALSE	canonical	3	44	junction_3	7.84573486395988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATTCTGAATCATGGA	-5029466	False	NA	-11	True	AATAAA	-32	NA	5029938	5024856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027380_5027845_5027894_5027979
WTC11_00035419	chr16	-	615	4	FSM	ENSG00000103174.13	ENST00000562037.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	23.0120741254576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGGGGTGGCTCTGCCA	-5033171	False	NA	NA	False	NA	NA	NA	5033643	5028945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5029009_5030384_5030494_5031744_5031885_5033340
WTC11_00035421	chr16	-	775	5	NNC	ENSG00000153048.11	novel	556	5	NA	NA	0	969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	908.01469564099	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTTCAGGCATGAAGT	-8838668	True	NA	NA	False	AAAAAG	-5	NA	8869006	8851972	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_8852005_8854912_8855327_8858349_8858473_8859170_8859336_8868965
WTC11_00035427	chr16	-	570	2	Genic_Genomic	ENSG00000220793.5	novel	480	1	NA	NA	0	4949	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAACAAGCAAACAAAAA	-9156870	False	NA	NA	False	NA	NA	NA	9156881	9151452	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_9151482_9156340
WTC11_00035428	chr16	-	558	2	NNC	ENSG00000260362.1	novel	660	2	NA	NA	2496	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTGCCTTTTGATTTC	-9674302	False	NA	NA	False	AATAAA	-27	NA	9674347	9666879	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_9667389_9674298
WTC11_00035429	chr16	-	8360	2	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-299	5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTGCCTTTTGATTTC	-9677097	False	NA	NA	False	AATAAA	-27	NA	9677142	9666879	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_9674771_9676673
WTC11_00035430	chr16	-	1291	9	FSM	ENSG00000166676.17	ENST00000575135.5	1298	9	0	7	0	-7	multi-exon	FALSE	canonical	1	1	junction_1	7.43198324809737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTGTGTCCCCATC	-10818286	True	NA	NA	False	CATAAA	-28	NA	10818600	10761232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10761569_10763557_10763764_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
WTC11_00035431	chr16	-	446	5	FSM	ENSG00000166676.17	ENST00000570692.1	585	5	139	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	7.39509972887452	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGGGCTGTTTTGTC	-10818341	True	NA	NA	False	NA	NA	NA	10818655	10775013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10775097_10800296_10800339_10808536_10808607_10818102_10818183_10818484
WTC11_00035432	chr16	-	833	6	FSM	ENSG00000188897.9	ENST00000612858.1	1046	6	106	107	106	-107	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCCAGGATGGGGC	NA	False	NA	NA	False	NA	NA	NA	11402158	11396510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11396676_11398347_11398510_11399471_11399601_11399701_11399816_11401265_11401407_11402036
WTC11_00035433	chr16	-	2466	5	NNC	ENSG00000189067.14	novel	717	5	NA	NA	0	9328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.225984677986	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCAGGCGCGGTGGCTC	-11581443	True	NA	NA	False	TTTAAA	-27	NA	11586919	11538393	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11538423_11547724_11549746_11553532_11553690_11556510_11556736_11586885
WTC11_00035434	chr16	-	229	1	FSM	ENSG00000153066.13	ENST00000572732.1	1509	1	1481	-201	-664	201	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCCCTTTTTGTCTCA	NA	False	NA	NA	False	AAAAAG	-30	NA	11690761	11690532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11690500_11690800
WTC11_00035435	chr16	-	2009	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	-6	30148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	767.583429333681	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGACAGAGAAGAAAAAAA	-11830590	True	NA	NA	False	AAAAAG	-1	NA	11851586	11803701	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803729_11837351_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
WTC11_00035438	chr16	-	1864	12	FSM	ENSG00000103342.13	ENST00000565267.5	1864	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	787.86574348176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTTTCGGTATTTGA	-11897840	False	NA	-19	True	AATAAA	-13	NA	11897881	11872681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11873172_11875760_11875930_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839
WTC11_00035439	chr16	-	2930	23	NIC	ENSG00000140694.17	novel	3071	24	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	1	14	junction_4	81.361515970339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629718	True	NA	-1	True	ATTAAA	-16	NA	14630206	14435700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
WTC11_00035440	chr16	-	1529	19	NIC	ENSG00000140694.17	novel	1988	12	NA	NA	7	-14	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	91.1948294234944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAATAAAGAGGTTTAT	-14629713	True	NA	NA	False	AATAAA	-24	NA	14630201	14576085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_14576277_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
WTC11_00035441	chr16	-	202	2	Antisense	novelGene_ENSG00000183426.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAGAGCTGAGGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	14952071	14951812	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14951838_14951894
WTC11_00035442	chr16	-	281	1	FSM	ENSG00000275910.1	ENST00000617759.1	563	1	190	92	190	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAATTGTGTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	15016200	15015919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15015900_15016200
WTC11_00035446	chr16	-	2470	18	NNC	ENSG00000270580.5	novel	2902	18	NA	NA	254	22	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	81.4313985165419	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGCTGAAACTTTAAAA	-15131337	False	NA	NA	False	NA	NA	NA	15131347	15104700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15104759_15105548_15105619_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131086
WTC11_00035447	chr16	-	2776	17	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	22	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	69.1802164187855	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGCTGAAACTTTAAAA	-15131700	False	NA	NA	False	NA	NA	NA	15131710	15104700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
WTC11_00035448	chr16	-	3181	14	NNC	ENSG00000250251.6	novel	4769	24	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_8	66.1309441573907	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	15154791	15132719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15133062_15133263_15133424_15133489_15133704_15133794_15134075_15134201_15134346_15135029_15135202_15135279_15135430_15135648_15135756_15136566_15136751_15136868_15137541_15137753_15137924_15138191_15138264_15138384_15138457_15154349
WTC11_00035449	chr16	-	1058	7	NNC	ENSG00000183793.14	novel	954	7	NA	NA	-43	-27	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_6	86.062800068064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGTAATAGCAAATGG	NA	False	NA	NA	False	NA	NA	NA	15378337	15365200	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15378086
WTC11_00035452	chr16	-	7336	5	ISM	ENSG00000091262.17	ENST00000205557.12	5140	31	65725	-6031	-1993	6031	3prime_fragment	TRUE	canonical	1	2	junction_2	1.58113883008419	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCAGGGGGAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	16157769	16143533	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_16150242_16150577_16150773_16154627_16154795_16154872_16155032_16157662
WTC11_00035454	chr16	-	202	2	Antisense	novelGene_ENSG00000214967.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGAAGGGGATAGAGCA	NA	False	NA	NA	False	NA	NA	NA	16393969	16393641	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_16393667_16393792
WTC11_00035455	chr16	-	216	1	FSM	ENSG00000279410.1	ENST00000624763.1	1370	1	836	318	836	-318	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATAGAGTTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	17193396	17193180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17193200_17193400
WTC11_00035456	chr16	-	3018	17	NNC	ENSG00000285628.1	novel	4082	22	NA	NA	3503	41608	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	90.8387780287141	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTACGTTTCTTAT	-18340737	False	NA	NA	False	NA	NA	NA	18340780	18276399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18276428_18317932_18318436_18319794_18319831_18319939_18320001_18321016_18321125_18324090_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339367_18339621_18339800_18339958_18340248
WTC11_00035459	chr16	-	2715	16	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1648	0	intron_retention	FALSE	canonical	3	20	junction_15	106.176708054702	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18380979	18358120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380065_18380808
WTC11_00035461	chr16	-	203	2	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	8378	18651	-2643	1800	internal_fragment	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGACCCCTGATGCCTCT	NA	False	NA	NA	False	NA	NA	NA	18393562	18393171	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18393225_18393412
WTC11_00035462	chr16	-	1319	3	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	6399	19372	-4622	1079	internal_fragment	FALSE	canonical	3	52	junction_1	47.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTGGGGGCAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	18395541	18393892	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18394253_18394370_18395043_18395254
WTC11_00035463	chr16	-	626	3	ISM	ENSG00000254681.6	ENST00000544578.1	727	5	-140	721	-125	-721	5prime_fragment	FALSE	canonical	3	148	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTGGTTCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	18402065	18395692	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18395765_18395885_18395958_18401583
WTC11_00035464	chr16	-	3917	32	FSM	ENSG00000185164.15	ENST00000381474.7	3911	32	0	-6	0	1	multi-exon	TRUE	canonical	2	7	junction_1	288.930083466838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATGTATTTCTTGGAT	-18554167	True	NA	NA	False	AATAAA	-30	NA	18562106	18417323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18417510_18417840_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347_18433476_18434653_18434768_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
WTC11_00035465	chr16	-	2276	7	NNC	ENSG00000170540.15	novel	2278	6	NA	NA	25	41761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.36576828752	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTCAAGTCCTTTTA	-18748480	True	NA	NA	False	NA	NA	NA	18801519	18749907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18749934_18791666_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
WTC11_00035466	chr16	-	3686	1	FSM	ENSG00000134419.15	ENST00000575669.1	3828	1	142	0	142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18723405	False	NA	-33	True	AATAAA	-14	NA	18786653	18782967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783000_18786700
WTC11_00035467	chr16	-	530	5	NNC	ENSG00000134419.15	novel	2203	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6948.89568114963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727086	True	NA	-34	True	AATAAA	-13	NA	18790334	18782968	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18783102_18784735_18784824_18788062_18788143_18788980_18789119_18790243
WTC11_00035468	chr16	-	464	5	NNC	ENSG00000134419.15	novel	797	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6096.03097822673	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727086	True	NA	-34	True	AATAAA	-13	NA	18790334	18782968	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18783102_18784735_18784824_18788062_18788143_18788980_18789119_18790309
WTC11_00035469	chr16	-	5754	6	NNC	ENSG00000103550.14	novel	6422	5	NA	NA	0	478	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	408.625696695643	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTTCCAGTGTGGAT	-19704746	True	NA	0	True	AGTAAA	-17	NA	19718227	19701458	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_19701587_19702732_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
WTC11_00035470	chr16	-	2204	11	NNC	ENSG00000196678.14	novel	1479	11	NA	NA	18	-3	intron_retention	FALSE	canonical	2	4	junction_3	38.3463166418888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGGTAGTACCTGTG	-20805455	True	NA	-3	True	AATAAA	-15	NA	20806428	20780195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_20780735_20789478_20789558_20790769_20790933_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714
WTC11_00035471	chr16	-	1655	9	NIC	ENSG00000196678.14	novel	2903	10	NA	NA	14	-610	intron_retention	FALSE	canonical	3	29	junction_1	22.7911715363647	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTCTAATAATGGA	-20805459	True	NA	NA	False	NA	NA	NA	20806432	20797983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714
WTC11_00035475	chr16	-	3194	19	FSM	ENSG00000180747.15	ENST00000520823.6	3194	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	31.2787645393981	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGTTCTATTGTATGTA	NA	False	NA	NA	False	AATATA	-18	NA	21467160	21446682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21447198_21447927_21448088_21448461_21448610_21449588_21449699_21452581_21452784_21452931_21453075_21454086_21454242_21455342_21455508_21455675_21455873_21456259_21456460_21457010_21457152_21457770_21457873_21457961_21458050_21458520_21458640_21459779_21459936_21460089_21460221_21463702_21463994_21464715_21464818_21467091
WTC11_00035476	chr16	-	3954	9	NNC	ENSG00000185864.18	novel	910	9	NA	NA	0	59588	intron_retention	FALSE	non_canonical	0	0	junction_1	148.809809404488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACTGCTAGATGAGAGA	NA	False	NA	NA	False	NA	NA	NA	21857657	21774980	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_21775019_21834586_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21857258_21857417_21857579
WTC11_00035477	chr16	-	3334	14	NIC	ENSG00000248124.9	novel	2131	14	NA	NA	-89	-9	intron_retention	FALSE	canonical	3	26	junction_1	51.7158829024382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTACCCTCTTGGTGCAT	NA	False	NA	NA	False	AATAAA	-5	NA	21820530	21796640	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130_21806230_21809645_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
WTC11_00035478	chr16	-	321	1	FSM	ENSG00000275445.1	ENST00000612618.1	583	1	47	215	47	-215	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTCATTGCCCGTTC	-22008005	True	NA	NA	False	NA	NA	NA	22008015	22007694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22007700_22008000
WTC11_00035479	chr16	-	3317	7	FSM	ENSG00000257122.5	ENST00000551766.5	3366	7	50	-1	50	1	multi-exon	FALSE	canonical	0	0	junction_1	40.970178856768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCCTGGATCTCACG	-22437644	False	NA	76	True	AATAAA	-35	NA	22437665	22418670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22420595_22426212_22426367_22429795_22429949_22432725_22432835_22434626_22434812_22435681_22435813_22437004
WTC11_00035480	chr16	-	2661	18	NNC	ENSG00000168434.13	novel	2935	17	NA	NA	300	42291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.4549016807123	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGGAAAAAAGGGTGT	-23451307	False	NA	NA	False	NA	NA	NA	23452889	23346201	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23346228_23388492_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
WTC11_00035481	chr16	-	2832	16	NIC	ENSG00000168434.13	novel	2935	17	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	27.9868222958989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-23451588	True	NA	-1	True	AATAAA	-20	NA	23453170	23388492	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_23389087_23392379_23392524_23393232_23393348_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
WTC11_00035483	chr16	-	652	6	NNC	ENSG00000004779.10	novel	665	5	NA	NA	0	68313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1704.35895280308	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCTTTAACTCCTTAA	-23572468	True	NA	NA	False	NA	NA	NA	23596277	23512700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23512727_23581013_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
WTC11_00035484	chr16	-	3971	13	FSM	ENSG00000083093.10	ENST00000568219.5	3963	13	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.0451172339442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTTATTGTTTCC	-23638832	True	NA	0	True	AATAAA	-22	NA	23641285	23603159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641126
WTC11_00035485	chr16	-	759	5	FSM	ENSG00000134398.15	ENST00000562458.2	759	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAATTTGTAAAATTAG	-23694713	False	NA	NA	False	NA	NA	NA	23694760	23690637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23694727
WTC11_00035486	chr16	-	3498	21	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	107.625496514534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAACTTCATAATTCT	-25009933	True	NA	-27	True	ATTAAA	-17	NA	25015331	24919396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
WTC11_00035489	chr16	-	432	3	FSM	ENSG00000260448.7	ENST00000563176.2	561	3	41	88	41	-88	multi-exon	FALSE	canonical	1	2	junction_1	4	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGAGCAACAGAGGGA	-25111340	False	NA	NA	False	NA	NA	NA	25111414	25100563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25100686_25103350_25103642_25111395
WTC11_00035491	chr16	-	472	4	FSM	ENSG00000169189.17	ENST00000567710.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	120.2109257375	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACGGAAGATGATGGGA	-27267270	True	NA	NA	False	GATAAA	-7	NA	27268733	27235214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27235300_27257434_27257582_27268162_27268375_27268705
WTC11_00035492	chr16	-	259	2	FSM	ENSG00000169189.17	ENST00000565626.1	259	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCTGAGCTGAGCATTC	-27267261	True	NA	NA	False	NA	NA	NA	27268724	27257341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27257582_27268705
WTC11_00035494	chr16	-	6941	15	NIC	ENSG00000169180.12	novel	4255	25	NA	NA	-1068	0	intron_retention	FALSE	canonical	3	14	junction_7	129.57152701209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	-28154266	False	NA	-3	True	AATAAA	-22	NA	28154277	28097978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28111943_28112903_28113051_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658
WTC11_00035496	chr16	-	475	1	FSM	ENSG00000260452.1	ENST00000565969.1	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTGTGAAATGTCAGA	-28111619	False	NA	NA	False	AATAGA	-40	NA	28111647	28111172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28111200_28111600
WTC11_00035498	chr16	-	2946	22	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	71128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704.836115783931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGCATGGTGGCTCAC	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28308450	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28308486_28379716_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00035499	chr16	-	1390	7	FSM	ENSG00000198156.10	ENST00000532254.1	2016	7	648	-22	648	22	multi-exon	FALSE	canonical	2	4	junction_6	7.15114598430831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATATAAAAATAAAATAA	NA	False	NA	NA	False	AATAAA	-4	NA	28362860	28342532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28362702
WTC11_00035500	chr16	-	3324	22	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	3434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704.836115783931	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCCTGGGGGGTCTTCC	-28403679	True	NA	NA	False	NA	NA	NA	28403841	28376144	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28376535_28379693_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
WTC11_00035503	chr16	-	1383	2	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGGAAGGCCGCAGG	-28738721	False	NA	NA	False	NA	NA	NA	28738746	28737313	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_-_28737787_28737836
WTC11_00035504	chr16	-	975	1	FSM	ENSG00000270424.1	ENST00000604632.1	637	1	-398	60	-398	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAGAAGGTGCAATGAC	NA	False	NA	NA	False	NA	NA	NA	28750993	28750018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28750000_28751000
WTC11_00035505	chr16	-	1625	1	FSM	ENSG00000275807.1	ENST00000614819.1	1539	1	419	-505	419	505	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTACAAAAAAAAAAAAATTT	-28823415	False	NA	NA	False	NA	NA	NA	28823550	28821925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28821900_28823600
WTC11_00035507	chr16	-	1645	12	FSM	ENSG00000177548.13	ENST00000544477.5	1645	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	26.4693804078137	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGACTGACGGGGGCCA	-28924549	True	NA	NA	False	NA	NA	NA	28925196	28904827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28925102
WTC11_00035509	chr16	-	747	8	NNC	ENSG00000254206.5	novel	3653	8	NA	NA	0	784	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	171.110419057999	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTACTGGCCCTACCTC	NA	False	NA	NA	False	NA	NA	NA	29404029	29384249	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_29384290_29385649_29385686_29385794_29385856_29389940_29390137_29390248_29390349_29393947_29394077_29403682_29403841_29404002
WTC11_00035511	chr16	-	678	5	ISM	ENSG00000205534.6	ENST00000566127.1	4221	29	57537	2586	57537	-2586	internal_fragment	FALSE	canonical	3	12	junction_1	17.6210101867061	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTCAAATGTACCGAGC	NA	False	NA	NA	False	NA	NA	NA	29537429	29530153	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_29530181_29533044_29533247_29533394_29533538_29536027_29536183_29537278
WTC11_00035512	chr16	-	2653	14	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-86	-17439	multi-exon	FALSE	canonical	3	19	junction_13	157.463811941049	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTTTCCTTGACAAA	-29612493	True	NA	NA	False	AATAAA	-39	NA	29613726	29545006	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29613102
WTC11_00035513	chr16	-	479	1	FSM	ENSG00000222375.1	ENST00000410443.1	354	1	272	-397	272	397	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTCATGACGCAACACT	NA	False	NA	NA	False	AAAAAG	-17	NA	29731132	29730653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29730700_29731100
WTC11_00035514	chr16	-	438	4	FSM	ENSG00000174943.11	ENST00000563264.1	440	4	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_1	43.2280772955109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCCGGGGAGGTGG	-29921621	False	NA	NA	False	NA	NA	NA	29923359	29911432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29911558_29911814_29911868_29911959_29912050_29923189
WTC11_00035516	chr16	-	755	3	FSM	ENSG00000149929.16	ENST00000563680.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	73	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCGGGTAAGGGGTTTC	-29995557	False	NA	NA	False	NA	NA	NA	29995592	29993466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29993809_29995102_29995464_29995540
WTC11_00035517	chr16	-	2248	12	NNC	ENSG00000149927.18	novel	1782	12	NA	NA	-823	-34	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	18.6463387938014	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCACTCCTGCCTCTCCA	-30013140	False	NA	NA	False	NA	NA	NA	30013159	30005905	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898_30010990_30012494
WTC11_00035519	chr16	-	956	8	NIC	ENSG00000102886.15	novel	1078	10	NA	NA	481	0	intron_retention	FALSE	canonical	2	3	junction_7	2.06031501455085	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTGTGCTGAGGGTGA	-30113042	False	NA	-1	True	AATAAA	-18	NA	30113056	30104809	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30105010_30108212_30108265_30108372_30108433_30111387_30111522_30112131_30112425_30112522_30112569_30112657_30112794_30113021
WTC11_00035521	chr16	-	438	4	NNC	ENSG00000169627.9	novel	1012	3	NA	NA	0	56557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1234.70023352499	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAAAACTCC	NA	False	NA	NA	False	AAAAAG	-6	NA	30193697	30136374	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30136410_30192934_30193075_30193357_30193456_30193532
WTC11_00035522	chr16	-	1248	8	NIC	ENSG00000198064.14	novel	3584	8	NA	NA	-398	-134	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	166.194132856483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTTAAAAAACAGGATG	NA	False	NA	NA	False	NA	NA	NA	30246275	30225736	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30225804_30227163_30227200_30227308_30227370_30231439_30231636_30231747_30231848_30235450_30235580_30245453_30245612_30245774
WTC11_00035523	chr16	-	2573	3	NNC	ENSG00000169957.10	novel	2289	2	NA	NA	0	44355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAGAACTAGAGAGA	-30526787	False	NA	NA	False	NA	NA	NA	30526821	30479648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30479678_30524003_30526052_30526325
WTC11_00035524	chr16	-	1203	3	FSM	ENSG00000156853.13	ENST00000563304.5	1207	3	4	0	4	0	multi-exon	FALSE	canonical	1	5	junction_2	33	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACCCCTCACTGCT	-30609482	True	NA	NA	False	NA	NA	NA	30610382	30604539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30605448_30609524_30609639_30610201
WTC11_00035525	chr16	-	1837	8	FSM	ENSG00000196118.12	ENST00000543128.5	1829	8	0	-8	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.11101251999952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGAGCACCTTCTGG	NA	False	NA	-6	True	AATAAA	-31	NA	30762221	30757422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30757655_30759011_30759102_30759177_30759248_30759341_30759459_30759653_30759725_30760283_30760454_30760605_30760669_30761197
WTC11_00035526	chr16	-	1157	8	FSM	ENSG00000196118.12	ENST00000433909.2	1157	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	5.09501557146486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCCCAATAAAGGTCTG	-30761535	False	NA	-50	True	NA	NA	NA	30761748	30757466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30757655_30759011_30759102_30759177_30759248_30759341_30759459_30759653_30759725_30760283_30760669_30761197_30761230_30761544
WTC11_00035527	chr16	-	3778	1	FSM	ENSG00000280211.1	ENST00000623557.1	2502	1	-210	-1066	-210	1066	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAATTACTTGGCTGC	-30776227	False	NA	NA	False	NA	NA	NA	30776243	30772465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30772500_30776200
WTC11_00035528	chr16	-	6221	2	NIC	ENSG00000102870.6	novel	6083	3	NA	NA	17	0	intron_retention	FALSE	canonical	3	28	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-30785402	True	NA	-6	True	AATAAA	-15	NA	30787188	30778455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30784516_30787027
WTC11_00035529	chr16	-	2065	6	FSM	ENSG00000099385.12	ENST00000380317.8	2409	6	113	231	11	-231	multi-exon	FALSE	canonical	1	2	junction_1	191.579330826684	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCATTTATGGAGAGC	-30893994	True	NA	NA	False	NA	NA	NA	30894189	30833856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30835149_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
WTC11_00035530	chr16	-	881	7	NNC	ENSG00000099385.12	novel	857	6	NA	NA	0	-10612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.400743258701	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTGTCCAAGTTGGCA	-30891670	True	NA	NA	False	NA	NA	NA	30894077	30861857	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30861882_30887794_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
WTC11_00035533	chr16	-	780	4	NNC	ENSG00000103490.14	novel	757	3	NA	NA	0	47403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.728515821755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGAAACTATTTGCTG	-31197156	True	NA	NA	False	AAAAAG	-45	NA	31202756	31154082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_31154110_31201485_31201842_31202146_31202204_31202416
WTC11_00035534	chr16	-	531	1	FSM	ENSG00000260267.1	ENST00000564629.1	3026	1	2170	325	2170	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGTGAGCCCTTCA	-31457387	False	NA	NA	False	NA	NA	NA	31457566	31457035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31457000_31457600
WTC11_00035542	chr16	-	3382	1	FSM	ENSG00000196470.12	ENST00000380006.2	3352	1	-26	-4	-26	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCTGCTTTAGCTCT	-48363814	False	NA	NA	False	ATTAAA	-29	NA	48363908	48360526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48360500_48363900
WTC11_00035543	chr16	-	2419	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCTGCTTTAGCTCT	-48365807	True	NA	NA	False	ATTAAA	-29	NA	48365901	48360526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48362431_48365386
WTC11_00035550	chr16	-	2218	10	NIC	ENSG00000166971.17	novel	2384	10	NA	NA	260	-11	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	40.1915168249639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAATTCAGCTGTTAAA	-53501889	False	1057	NA	False	AATAAA	-9	NA	53502946	53491389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53502699
WTC11_00035568	chr16	-	3141	9	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	-66	0	intron_retention	FALSE	non_canonical	0	0	junction_3	393.111605495183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-57185871	False	NA	NA	False	AATAAA	-18	NA	57185888	57152465	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57174168_57174287_57178501_57178853_57185820
WTC11_00035577	chr16	-	7852	50	FSM	ENSG00000125107.19	ENST00000567188.5	7830	50	0	-22	0	0	multi-exon	TRUE	canonical	0	0	junction_6	222.426407767011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGCTTTGTGCAA	-58612839	True	NA	-6	True	AATACA	-24	NA	58629832	58520683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58527922_58528106_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556861_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
WTC11_00035582	chr16	-	2463	11	NNC	ENSG00000125166.13	novel	2421	10	NA	NA	0	75195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	390.946594818269	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTTAGGACATATGCT	-58715996	True	NA	NA	False	AAAAAG	-3	NA	58734316	58631935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58631978_58707130_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
WTC11_00035593	chr16	-	4323	20	FSM	ENSG00000135723.14	ENST00000567752.5	4321	20	0	-2	0	0	multi-exon	FALSE	canonical	3	108	junction_17	25.740017025136	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245067	True	NA	-1	True	AATAAA	-20	NA	67247464	67229388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238968_67239347_67239455_67247209
WTC11_00035603	chr16	-	680	5	ISM	ENSG00000124067.17	ENST00000541864.6	3627	24	91	13044	91	3	5prime_fragment	FALSE	canonical	3	47	junction_4	99.6151971337707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAGGGCAATG	-67966435	False	NA	NA	False	TATAAA	-14	NA	67966787	67957525	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
WTC11_00035608	chr16	-	2845	4	NNC	ENSG00000168802.14	novel	2921	4	NA	NA	0	13017	intron_retention	FALSE	non_canonical	0	0	junction_1	228.749256222227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAACAGAGTTTACCT	NA	False	NA	NA	False	NA	NA	NA	69121492	69104992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69105026_69118012_69120650_69121052_69121171_69121435
WTC11_00035614	chr16	-	3660	19	FSM	ENSG00000090861.17	ENST00000675751.1	3653	19	0	-7	0	0	multi-exon	FALSE	canonical	2	43	junction_14	278.992261718431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00035616	chr16	-	3989	19	FSM	ENSG00000090861.17	ENST00000674652.1	3987	19	0	-2	0	0	multi-exon	FALSE	canonical	2	43	junction_14	377.855028866239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270572	True	NA	-28	True	AATAAA	-10	NA	70289555	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
WTC11_00035618	chr16	-	3775	20	FSM	ENSG00000090861.17	ENST00000676247.1	3790	20	22	-7	0	0	multi-exon	FALSE	canonical	2	25	junction_9	275.649824024548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270574	True	NA	-28	True	AATAAA	-10	NA	70289557	70252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
WTC11_00035630	chr16	-	1824	7	NIC	ENSG00000102984.15	novel	1187	9	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	17.710637105047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTTTCTCTCAATGT	-71882999	True	NA	0	True	AATAAA	-25	NA	71884137	71859675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71860673_71861775_71861943_71864137_71864243_71867892_71868038_71879906_71880024_71883210_71883274_71883907
WTC11_00035634	chr16	-	4717	12	NIC	ENSG00000168411.14	novel	4948	13	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	114.973083447194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661231	True	NA	-11	True	AATAAA	-15	NA	74666823	74621398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_74624072_74626342_74626555_74628451_74628667_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
WTC11_00035636	chr16	-	2158	11	ISM	ENSG00000103091.15	ENST00000262144.11	5878	26	75388	2207	0	510	3prime_fragment	FALSE	canonical	3	138	junction_9	21.4962787477275	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGTGAATCATTTTTT	-74909721	False	NA	0	True	AAAAAG	-18	NA	74909735	74873568	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500
WTC11_00035648	chr16	-	6384	1	FSM	ENSG00000178573.7	ENST00000393350.1	6384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATTAAATGTAGTAGTT	-79600572	False	NA	-27	True	AATAAA	-22	NA	79600714	79594330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_79594300_79600700
WTC11_00035652	chr16	-	3093	12	FSM	ENSG00000140943.18	ENST00000570064.5	3086	12	0	-7	0	2	multi-exon	FALSE	canonical	3	215	junction_5	25.6566650757638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTAACGGACTCTTTCC	-84075417	False	NA	-17	True	AATAAA	-31	NA	84075433	84053758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596
WTC11_00035654	chr16	-	549	3	FSM	ENSG00000140943.18	ENST00000567557.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCGCTTGTGACCATG	-84112534	True	NA	NA	False	AATATA	-15	NA	84116835	84101800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84102108_84110712_84110854_84116734
WTC11_00035664	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000634347.1	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.1136400116731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554749_86555168
WTC11_00035665	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.9447963778537	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
WTC11_00035666	chr16	-	544	6	FSM	ENSG00000103248.19	ENST00000569000.5	573	6	29	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	19.6102014268084	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGCAAGCGCCCAAAGCC	-86554533	True	NA	NA	False	NA	NA	NA	86555206	86541738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86554644_86554749_86555168
WTC11_00035667	chr16	-	531	6	FSM	ENSG00000103248.19	ENST00000568798.5	560	6	29	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	18.9420167880825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCAGGTGCTCCTTAT	-86554533	True	NA	NA	False	NA	NA	NA	86555206	86542109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86542214_86546558_86546650_86548034_86548112_86548463_86548578_86554644_86554752_86555168
WTC11_00035673	chr16	-	1889	11	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	255.979764825269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGCCGTTTTTCTGTTT	-88655049	True	NA	-4	True	AATAAA	-20	NA	88663074	88651934	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
WTC11_00035676	chr16	-	788	5	FSM	ENSG00000198931.11	ENST00000569616.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2711.32655493579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATTACACACAGCG	-88783124	True	NA	-53	True	GGGGCT	-44	NA	88811897	88809517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809908_88810069_88810149_88810422_88810557_88811549_88811657_88811819
WTC11_00035680	chr16	-	1615	9	FSM	ENSG00000259803.8	ENST00000682282.1	1615	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.3956711569287	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCGTCCTCCCTGGTTC	-89199508	False	NA	-5	True	GATAAA	-14	NA	89200537	89195760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651_89198798_89199022_89199192_89199412_89199568_89199712_89199817_89200477
WTC11_00035683	chr16	-	2239	1	FSM	ENSG00000167522.17	ENST00000623388.1	2239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTGGAAAATACAGGG	-89279691	False	NA	NA	False	NA	NA	NA	89279716	89277477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89277500_89279700
WTC11_00035684	chr16	-	2963	6	NIC	ENSG00000167522.17	novel	2740	6	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_5	60.6214483495734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAAACTTGGTCTTTGT	-89483926	True	NA	-13	True	AATAAA	-14	NA	89490548	89286668	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317076_89490244
WTC11_00035685	chr16	-	2691	5	NIC	ENSG00000167522.17	novel	2740	6	NA	NA	21	-2	intron_retention	FALSE	canonical	1	5	junction_4	56.0468553979614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGAAACTTGGTCTTT	-89313429	False	NA	-15	True	AATAAA	-12	NA	89313527	89286670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89313350
WTC11_00035690	chr16	-	4505	44	NNC	ENSG00000187741.15	novel	4601	43	NA	NA	0	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	42.9909746901999	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGCTGACCTGTCCCA	-89811706	True	NA	-105	True	NA	NA	NA	89816635	89738639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89762637_89762794_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814610_89815876_89815987_89816536
WTC11_00035692	chr16	-	1909	11	NNC	ENSG00000187741.15	novel	1641	11	NA	NA	152	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	63.9502931971387	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTACATGTGCATC	-89811527	False	NA	-2	True	AATAAA	-17	NA	89816456	89798357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89799080_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814610_89815876_89815987_89816079
WTC11_00035697	chr16	+	1688	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAAGGAGAAAGTGGG	NA	False	NA	NA	False	NA	NA	NA	22475749	22477437	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_22475700_22477400
WTC11_00035707	chr17	+	1089	3	NIC	ENSG00000187624.9	novel	878	3	NA	NA	-153	-95	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGATTCTCAGTGAGTT	NA	False	NA	NA	False	AATACA	-18	NA	410171	421002	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_410647_413147_413431_420671
WTC11_00035709	chr17	+	373	3	FSM	ENSG00000167695.15	ENST00000572018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	52	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGATCCTTCTCTTCC	731348	True	NA	NA	False	NA	NA	NA	732545	741365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_732770_733097_733182_741300
WTC11_00035710	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9203969395706	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	731398	True	NA	94	True	ATTAAA	-19	NA	732595	742968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
WTC11_00035711	chr17	+	2386	4	FSM	ENSG00000167695.15	ENST00000570699.1	2386	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5034434281774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTGTCTTTTTT	732619	True	NA	9	True	TTTAAA	-13	NA	732676	742883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_733182_737845_738048_740504_740601_741300
WTC11_00035712	chr17	+	677	2	FSM	ENSG00000167695.15	ENST00000570892.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAATTGTCTTTTTTT	741652	True	NA	10	True	TTTAAA	-14	NA	741663	742884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_742053_742596
WTC11_00035713	chr17	+	1058	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	310	-598	68	598	multi-exon	FALSE	canonical	3	352	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCGATGTTGATTAGCA	777613	False	NA	NA	False	NA	NA	NA	782667	784115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_782693_783082
WTC11_00035715	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	38.8615777114391	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	777298	True	NA	14	True	AATAAA	-23	NA	782352	792509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_782693_783082_783328_787964_788133_791533
WTC11_00035718	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_3	41.811747418904	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	997128	1003671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
WTC11_00035719	chr17	+	560	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	36	5	36	-5	multi-exon	FALSE	canonical	3	158	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	1512428	True	NA	9	True	AATAAA	-18	NA	1516912	1518096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1517094_1517717
WTC11_00035720	chr17	+	534	4	FSM	ENSG00000167716.19	ENST00000468539.5	562	4	28	0	4	0	multi-exon	FALSE	canonical	1	1	junction_1	15.2534149181967	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCGGGCCCGAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	1716550	1733645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1716634_1732324_1732491_1732665_1732832_1733526
WTC11_00035721	chr17	+	6995	10	FSM	ENSG00000167716.19	ENST00000409644.6	6982	10	-14	1	0	0	multi-exon	TRUE	canonical	3	24	junction_6	7.5293663760433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTGAACTGAGGCTTG	NA	False	NA	8	True	AATAAA	-16	NA	1724689	1738584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
WTC11_00035722	chr17	+	4432	9	FSM	ENSG00000167716.19	ENST00000464528.5	4432	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.88095013307406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTGAACTGAGGCTTG	NA	False	NA	8	True	AATAAA	-16	NA	1727573	1738584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1736219_1737364
WTC11_00035724	chr17	+	1458	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	-20	0	11	0	multi-exon	FALSE	canonical	3	147	junction_1	17.4636649027841	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1759587	True	NA	16	True	AATAAA	-17	NA	1762039	1777565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
WTC11_00035725	chr17	+	795	6	FSM	ENSG00000132386.11	ENST00000576406.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	68.6568277740823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAAAGTGACCCAGA	1759615	True	NA	NA	False	NA	NA	NA	1762067	1776578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1762114_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531
WTC11_00035728	chr17	+	654	7	FSM	ENSG00000132383.12	ENST00000570451.5	630	7	-24	0	-24	0	multi-exon	FALSE	canonical	3	23	junction_1	360.833756735702	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCAGGTCCCAGCCTG	1822201	True	NA	NA	False	NA	NA	NA	1829946	1875705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1830135_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660
WTC11_00035729	chr17	+	4812	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	35	0	-35	multi-exon	FALSE	canonical	3	810	junction_8	68.6626718093609	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAAAAAAACTGGTATT	1822259	True	NA	NA	False	AAAAAG	-26	NA	1830004	1900047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
WTC11_00035730	chr17	+	2662	13	FSM	ENSG00000108963.19	ENST00000674200.2	2662	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	21.5153369070118	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027971	True	NA	14	True	AATAAA	-25	NA	2030136	2043898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
WTC11_00035731	chr17	+	2755	13	FSM	ENSG00000108963.19	ENST00000571418.7	2607	13	-50	-98	-28	98	multi-exon	FALSE	canonical	3	11	junction_5	53.2139288365577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGAGGATTGCTCA	NA	False	NA	112	True	NA	NA	NA	2030108	2043996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
WTC11_00035733	chr17	+	1894	8	NIC	ENSG00000108963.19	novel	2518	12	NA	NA	0	-473	intron_retention	FALSE	canonical	3	163	junction_3	53.7553034877604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	2036858	False	NA	18	True	AATAAA	-14	NA	2036894	2043425	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2042232_2042604
WTC11_00035734	chr17	+	2718	7	FSM	ENSG00000108963.19	ENST00000570867.6	2739	7	0	21	0	-21	multi-exon	FALSE	canonical	3	160	junction_6	13.1582251420505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCCTAAATTGACCCC	2038928	False	NA	-7	True	AATAAA	-4	NA	2038964	2043877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
WTC11_00035736	chr17	+	2702	2	FSM	ENSG00000108963.19	ENST00000572684.2	3081	2	358	21	-72	-21	multi-exon	FALSE	canonical	3	171	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCCTAAATTGACCCC	2040993	False	NA	-7	True	AATAAA	-4	NA	2041029	2043877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2041622_2041767
WTC11_00035738	chr17	+	1846	3	FSM	ENSG00000108963.19	ENST00000263084.7	1827	3	-19	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	80.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2041497	False	NA	14	True	AATAAA	-25	NA	2041533	2043898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2041622_2041767_2042232_2042604
WTC11_00035740	chr17	+	661	1	FSM	ENSG00000262333.1	ENST00000575692.1	955	1	-61	355	-61	-355	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGGTGGTCGTGGA	2305873	False	NA	NA	False	NA	NA	NA	2306699	2307360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2306700_2307400
WTC11_00035741	chr17	+	5309	23	FSM	ENSG00000141258.13	ENST00000426855.6	4734	23	-583	8	-567	0	multi-exon	FALSE	canonical	3	85	junction_5	16.928446888288	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGGAGCCTCTGGGAC	2336916	False	NA	16	True	AATAAA	-12	NA	2336930	2381050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
WTC11_00035742	chr17	+	4881	24	FSM	ENSG00000141258.13	ENST00000268989.8	4878	24	-3	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	28.10189399533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	2335954	True	NA	20	True	AATAAA	-16	NA	2337497	2381054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2367270_2367406_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
WTC11_00035748	chr17	+	570	5	FSM	ENSG00000007168.14	ENST00000576586.5	557	5	-13	0	-13	0	multi-exon	FALSE	canonical	1	4	junction_1	227.554801091957	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCTTGGTCAGAAACG	2593092	True	NA	NA	False	AATGAA	-25	NA	2593196	2667045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2593331_2638098_2638321_2665371_2665457_2666015_2666091_2666991
WTC11_00035749	chr17	+	5541	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	-326	-11	-33	4	multi-exon	FALSE	canonical	3	14	junction_2	163.574047867632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTTTTTTTT	2593583	False	NA	23	True	ATTAAA	-19	NA	2593620	2685619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
WTC11_00035750	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	29.6292085618229	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	2589236	True	NA	19	True	ATTAAA	-15	NA	2593653	2685615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
WTC11_00035751	chr17	+	2875	1	FSM	ENSG00000279432.1	ENST00000622996.1	3122	1	-73	320	-73	-320	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTTCTAATTCTGGTC	2639206	False	NA	NA	False	NA	NA	NA	2639223	2642098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2639200_2642100
WTC11_00035752	chr17	+	7097	23	NNC	ENSG00000132359.15	novel	606	6	NA	NA	56972	0	intron_retention	FALSE	canonical	3	44	junction_3	26.0232334210403	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	2853442	False	NA	29	True	AATAAA	-19	NA	2853453	3037741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
WTC11_00035754	chr17	+	416	4	FSM	ENSG00000132359.15	ENST00000575979.1	543	4	0	127	0	-127	multi-exon	FALSE	canonical	3	117	junction_1	17.1529071070248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGTGAGGGTGGGA	3008080	True	NA	NA	False	NA	NA	NA	3008100	3026121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3008146_3018060_3018199_3020476_3020596_3026007
WTC11_00035755	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.9231601404855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	3636283	True	NA	-73	True	NA	NA	NA	3636458	3661448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
WTC11_00035756	chr17	+	476	4	FSM	ENSG00000040531.16	ENST00000495445.5	536	4	-22	82	0	-82	multi-exon	FALSE	canonical	3	50	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCCTGGGCCTGGCG	3635602	True	NA	NA	False	NA	NA	NA	3636724	3647522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443
WTC11_00035757	chr17	+	617	5	FSM	ENSG00000040531.16	ENST00000452111.5	617	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.2418814048939	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACCAATCTTAACG	3635602	True	NA	NA	False	NA	NA	NA	3636724	3648931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636888_3637106_3637317_3640187_3640268_3647443_3647523_3648846
WTC11_00035759	chr17	+	4141	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	-2	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.98575548592841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	3635635	True	NA	NA	False	ATTAAA	-22	NA	3636757	3663103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
WTC11_00035760	chr17	+	982	1	FSM	ENSG00000240898.1	ENST00000486753.1	483	1	-486	-13	-486	13	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAAGGATCTCT	NA	False	NA	NA	False	NA	NA	NA	3664733	3665715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3664700_3665700
WTC11_00035761	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3644827	True	NA	22	True	ATTAAA	-15	NA	3668811	3669665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3668900_3669097
WTC11_00035762	chr17	+	858	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	-99	3	-89	0	multi-exon	FALSE	canonical	3	157	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3644738	True	NA	22	True	ATTAAA	-15	NA	3668722	3669665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3669013_3669097
WTC11_00035763	chr17	+	2806	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATATTTATAAACCCT	3720787	True	NA	NA	False	AATAAA	-22	NA	3723893	3726699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3723900_3726700
WTC11_00035764	chr17	+	1605	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	-17	0	-3	0	multi-exon	FALSE	canonical	2	11	junction_1	30.7354301526214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	4143178	False	NA	42	True	TTTAAA	-29	NA	4143193	4157572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
WTC11_00035765	chr17	+	1981	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	55	junction_1	13.1233464566864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4143169	False	NA	9	True	ATTAAA	-25	NA	4143184	4157697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
WTC11_00035766	chr17	+	537	1	FSM	ENSG00000262519.1	ENST00000575018.1	310	1	-19	-208	-19	208	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGCTCCTTGACAA	NA	False	NA	NA	False	NA	NA	NA	4572186	4572723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4572200_4572700
WTC11_00035767	chr17	+	2294	8	FSM	ENSG00000188176.12	ENST00000389313.9	2295	8	0	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_2	5.84144237150311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGGTTTGTCATTTCT	4584282	True	NA	8	True	CATAAA	-19	NA	4584528	4608318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4585005_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
WTC11_00035768	chr17	+	1832	13	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	128.100519341475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTACTAAGCATGAGT	4710286	False	NA	4	True	CATAAA	-12	NA	4710446	4721482	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
WTC11_00035771	chr17	+	1986	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	-209	1	-173	0	multi-exon	FALSE	canonical	3	275	junction_1	62.8347362661184	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	4710262	False	NA	18	True	AATAAA	-14	NA	4710422	4721496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
WTC11_00035772	chr17	+	1773	14	FSM	ENSG00000141480.18	ENST00000346341.6	1769	14	-4	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	149.858986972191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTTTTCTCTGTAG	4710484	False	NA	21	True	AATAAA	-17	NA	4710629	4721499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
WTC11_00035777	chr17	+	1790	15	FSM	ENSG00000141480.18	ENST00000412477.7	1779	15	-11	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	121.677224404469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	4708595	True	NA	18	True	AATAAA	-14	NA	4710681	4721496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716672_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
WTC11_00035782	chr17	+	872	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	-36	0	-36	0	multi-exon	FALSE	canonical	3	179	junction_2	17	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	NA	False	NA	NA	False	AATAAA	-33	NA	4731391	4733607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4731775_4731907_4733049
WTC11_00035783	chr17	+	1137	3	FSM	ENSG00000161920.11	ENST00000575284.5	652	3	-17	-468	-17	172	multi-exon	TRUE	canonical	2	2	junction_2	105.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGATTTGGGACGAG	4730108	True	NA	NA	False	NA	NA	NA	4731410	4733780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4731775_4731907_4732938
WTC11_00035784	chr17	+	886	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	-15	0	-15	0	multi-exon	FALSE	canonical	1	38	junction_5	3029.86382532285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	4796113	False	NA	36	True	AATAAA	-23	NA	4796128	4798502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
WTC11_00035785	chr17	+	831	6	FSM	ENSG00000142507.10	ENST00000571309.1	583	6	-75	-173	-15	0	multi-exon	FALSE	canonical	1	19	junction_3	3049.91287744421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	4796113	False	NA	36	True	AATAAA	-23	NA	4796128	4798502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797716_4797812_4798008_4798154_4798279
WTC11_00035786	chr17	+	844	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	-20	0	0	0	multi-exon	FALSE	canonical	3	7142	junction_3	502.900944520887	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	4742573	True	NA	29	True	AATAAA	-16	NA	4796143	4798495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
WTC11_00035787	chr17	+	3461	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	-20	2	-20	0	multi-exon	FALSE	canonical	3	105	junction_23	14.0608178006196	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	4804586	True	NA	11	True	AATAAA	-12	NA	4807131	4823428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
WTC11_00035795	chr17	+	5043	32	NNC	ENSG00000141503.17	novel	3939	32	NA	NA	-92	-2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_15	59.7441301066978	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGGCCGCATGTCCT	4833192	False	NA	24	True	AATAAA	-21	NA	4833247	4898058	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891515_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893990_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
WTC11_00035796	chr17	+	5017	32	FSM	ENSG00000141503.17	ENST00000355280.11	5017	32	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_21	43.2112156404792	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCGCATGTCCTTGC	4824707	True	NA	27	True	AATAAA	-24	NA	4833339	4898061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
WTC11_00035797	chr17	+	5011	32	NNC	ENSG00000141503.17	novel	5017	32	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_21	48.0221506296065	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGGCCGCATGTCCT	4824707	True	NA	24	True	AATAAA	-21	NA	4833339	4898058	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893990_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
WTC11_00035803	chr17	+	3148	5	FSM	ENSG00000141503.17	ENST00000574871.1	3150	5	0	2	0	-2	multi-exon	FALSE	canonical	3	237	junction_2	41.8651107725753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGGCCGCATGTCCT	4894509	False	NA	24	True	AATAAA	-21	NA	4894543	4898058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4895243_4895349_4896104_4896192_4896343_4896428_4896589_4896673
WTC11_00035805	chr17	+	3353	2	FSM	ENSG00000205710.4	ENST00000521575.1	1275	2	55	-2133	55	-2	multi-exon	FALSE	canonical	3	20	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGGTCTCTGTCTTTG	4899151	True	NA	22	True	NA	NA	NA	4899472	4902932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4899829_4899935
WTC11_00035806	chr17	+	3201	3	FSM	ENSG00000205710.4	ENST00000381365.4	3201	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCTGTCTTTGTC	4899214	True	NA	24	True	NA	NA	NA	4899535	4902934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4899829_4899935_4900146_4900236
WTC11_00035807	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_2	250.294146955138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4939879	False	NA	-11	True	NA	NA	NA	4940007	4945191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035808	chr17	+	535	2	FSM	ENSG00000108523.16	ENST00000571365.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGCAGAACTCCGCTTC	4939917	False	NA	NA	False	NA	NA	NA	4940045	4940836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940231_4940486
WTC11_00035809	chr17	+	606	4	FSM	ENSG00000108523.16	ENST00000576452.5	589	4	-17	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	346.503487235939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGAATGAGGAAGGGG	4935071	True	NA	NA	False	NA	NA	NA	4940082	4942466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940361_4940872_4940994_4941076_4941158_4942340
WTC11_00035811	chr17	+	1806	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	189	junction_1	181.562967344971	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4935095	True	NA	20	True	AATAAA	-21	NA	4940106	4945222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035812	chr17	+	1765	11	NIC	ENSG00000108523.16	novel	1775	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_2	245.288014383092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4935120	True	NA	20	True	AATAAA	-21	NA	4940131	4945222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4940361_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035813	chr17	+	1312	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	229.05059013132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGGACTAAGGAAGGG	4935140	True	NA	7	True	AATAAA	-8	NA	4940151	4945209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4940231_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035814	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	172.677033865802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4940084	False	NA	20	True	AATAAA	-21	NA	4940267	4945222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035817	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	217.913733072811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	4940253	False	NA	-30	True	GGGGCT	-28	NA	4940486	4945172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
WTC11_00035819	chr17	+	563	6	FSM	ENSG00000108515.18	ENST00000522798.5	563	6	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	46.645042609049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCAGCTACCCGCCC	4949165	False	NA	NA	False	NA	NA	NA	4949176	4953845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4949294_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711
WTC11_00035822	chr17	+	2130	11	NIC	ENSG00000108515.18	novel	1453	12	NA	NA	-312	0	intron_retention	FALSE	canonical	2	59	junction_1	27.8583919133894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAACCAAGACAGCTGT	4950751	False	NA	-2	True	AATAAA	-6	NA	4950767	4957118	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4956144_4956572_4956682_4956830_4956890_4956977
WTC11_00035823	chr17	+	2081	12	NIC	ENSG00000108515.18	novel	1521	12	NA	NA	-127	0	intron_retention	FALSE	canonical	1	2	junction_2	51.2380604919352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	4950882	False	NA	11	True	AATAAA	-19	NA	4950952	4957131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4951183_4951827_4951915_4952024_4952148_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4956144_4956572_4956682_4956830_4956890_4956977
WTC11_00035826	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	34.5734336456417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	4951024	False	NA	11	True	AATAAA	-19	NA	4951094	4957131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
WTC11_00035828	chr17	+	803	7	FSM	ENSG00000129250.12	ENST00000574165.1	799	7	-4	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	142.87261225768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACTCTGTGGAGGTAAG	4993672	True	NA	NA	False	NA	NA	NA	4997949	5002109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4998157_4999012_4999047_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058
WTC11_00035829	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	TRUE	canonical	3	257	junction_1	41.5348106516422	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	4993672	True	NA	NA	False	AATAAA	-18	NA	4997949	5028401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
WTC11_00035830	chr17	+	4796	2	FSM	ENSG00000180787.6	ENST00000318833.4	4987	2	91	100	91	-100	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAGCTATGCCCATGT	5078370	False	NA	NA	False	NA	NA	NA	5078557	5096274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5078576_5091496
WTC11_00035831	chr17	+	480	3	FSM	ENSG00000234327.9	ENST00000413077.2	508	3	12	16	0	0	multi-exon	FALSE	canonical	3	304	junction_1	28	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTCTTTGAACATTCA	5109982	True	NA	4	True	AATAAA	-15	NA	5111925	5114377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5112119_5113385_5113453_5114157
WTC11_00035832	chr17	+	468	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	0	1	0	-1	multi-exon	FALSE	canonical	3	93	junction_1	133.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	5109982	True	NA	9	True	AATAAA	-20	NA	5111925	5114382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5112102_5113385_5113453_5114157
WTC11_00035833	chr17	+	574	1	ISM	ENSG00000129204.17	ENST00000574788.6	8870	38	57904	482	45121	-482	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTAGGTAGGAGTGGC	NA	False	NA	NA	False	AATATA	-3	NA	5173935	5174509	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_5173900_5174500
WTC11_00035834	chr17	+	5928	18	FSM	ENSG00000029725.17	ENST00000537505.6	5909	18	-19	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	58.5049608992861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAATGTTGAAACATCT	5277578	True	NA	18	True	AATAAA	-30	NA	5282264	5386340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5380363_5380463_5381388_5381506_5383121
WTC11_00035835	chr17	+	931	5	NIC	ENSG00000029725.17	novel	5909	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	114.23112535557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTCTTTGCTTCCTCCC	5277597	True	NA	3	True	AATAAA	-16	NA	5282283	5336687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5336487
WTC11_00035836	chr17	+	1317	5	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-222	44638	0	1896	5prime_fragment	FALSE	canonical	3	257	junction_4	28.4462211901687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATGCAAAAAACTGCTT	5277578	True	NA	NA	False	AATAAA	-9	NA	5282264	5338585	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018
WTC11_00035840	chr17	+	1074	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	-17	0	-17	0	multi-exon	TRUE	canonical	3	322	junction_3	241.960511011382	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	5419585	False	NA	29	True	AAGAAA	-18	NA	5419623	5432715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
WTC11_00035841	chr17	+	1411	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	118	junction_5	280.355773973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
WTC11_00035842	chr17	+	1705	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	369	junction_4	201.537490308875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
WTC11_00035843	chr17	+	1083	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	-268	0	0	multi-exon	FALSE	canonical	3	32	junction_4	331.096662622866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419781	True	NA	26	True	AATAAA	-15	NA	5419887	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
WTC11_00035847	chr17	+	1010	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	-15	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	205.091578460832	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	5406671	True	NA	27	True	AATAAA	-16	NA	5420166	5432877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
WTC11_00035850	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	189.454974862103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	5406704	True	NA	18	True	AAGAAA	-7	NA	5420199	5432704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
WTC11_00035851	chr17	+	2275	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	3	-74	3	0	multi-exon	FALSE	canonical	3	65	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	5486355	True	NA	14	True	ATTAAA	-16	NA	5486398	5490811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5488822
WTC11_00035852	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	5483823	True	NA	14	True	ATTAAA	-16	NA	5486565	5490811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5488195_5488590_5488822
WTC11_00035853	chr17	+	6059	9	FSM	ENSG00000179314.16	ENST00000317744.10	6056	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	61	junction_1	16.2480768092719	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	6068834	True	NA	21	True	AATAAA	-18	NA	6070375	6124427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6070653_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
WTC11_00035854	chr17	+	1922	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.919475303614	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	6436081	True	NA	5	True	AATAAA	-18	NA	6444440	6451469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
WTC11_00035858	chr17	+	1556	6	FSM	ENSG00000129195.16	ENST00000572595.6	1551	6	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	233.462116841255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGACATCTGTTCC	6436081	True	NA	13	True	AATAAA	-7	NA	6444440	6451055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6446094_6446188_6447462_6447759_6449311_6449408_6450361
WTC11_00035859	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	335.540887970453	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	6436081	True	NA	23	True	AATAAA	-17	NA	6444440	6451065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
WTC11_00035862	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1506.06647337434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	6640888	False	NA	-8	True	NA	NA	NA	6640984	6643067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
WTC11_00035863	chr17	+	2325	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	-11	-1855	-11	428	multi-exon	FALSE	canonical	0	0	junction_1	1575.43736431789	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAACATGAACATATTT	6629671	True	NA	NA	False	NA	NA	NA	6641004	6644969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
WTC11_00035864	chr17	+	634	4	FSM	ENSG00000129235.11	ENST00000574734.5	616	4	-18	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1430.35753106231	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	6629682	True	NA	14	True	AATAAA	-43	NA	6641015	6643116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641228_6641752_6641933_6642248_6642325_6642950
WTC11_00035865	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2916	junction_3	304.055185049615	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	6629726	True	NA	-47	True	NA	NA	NA	6641059	6644541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
WTC11_00035867	chr17	+	1912	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	1010	-822	376	516	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACAGTTATTTCCTGT	6642014	False	NA	NA	False	NA	NA	NA	6642033	6643945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6642000_6643900
WTC11_00035868	chr17	+	1968	1	FSM	ENSG00000256806.6	ENST00000542475.3	1715	1	-109	-144	-109	144	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCAGCTTTGAATGTTC	6651448	True	NA	NA	False	AATACA	-12	NA	6651652	6653620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6651700_6653600
WTC11_00035869	chr17	+	2407	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	-17	2	-17	-2	multi-exon	FALSE	canonical	2	7	junction_4	3.9102353929658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGTAGTCTTCTTTTG	6995799	True	NA	20	True	AATAAA	-33	NA	6996031	7010752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
WTC11_00035870	chr17	+	2205	13	NIC	ENSG00000108839.12	novel	2392	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	3.94669341207154	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	6995796	True	NA	22	True	AATAAA	-35	NA	6996028	7010754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6999408_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
WTC11_00035871	chr17	+	974	4	FSM	ENSG00000219200.12	ENST00000546395.5	952	4	-22	0	22	0	multi-exon	TRUE	canonical	3	37	junction_1	622.737148045269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	7012406	False	NA	28	True	AATAAA	-7	NA	7012438	7014520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012762_7013318_7013517_7013665_7013743_7014144
WTC11_00035872	chr17	+	820	3	FSM	ENSG00000219200.12	ENST00000548577.5	810	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	1218	junction_1	80.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7012387	False	NA	40	True	AATAAA	-19	NA	7012406	7014532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012762_7013665_7013743_7014144
WTC11_00035873	chr17	+	807	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	-24	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	640.056768315645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	7001460	True	NA	27	True	AATAAA	-6	NA	7012623	7014519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
WTC11_00035874	chr17	+	599	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	-8	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	552.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001460	True	NA	40	True	AATAAA	-19	NA	7012623	7014532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012758_7013665_7013743_7014144
WTC11_00035875	chr17	+	1662	8	FSM	ENSG00000161939.19	ENST00000547863.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	312.408549884308	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001496	False	NA	18	True	AATAAA	-14	NA	7012659	7017520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012758_7013665_7013743_7014144_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
WTC11_00035877	chr17	+	996	6	FSM	ENSG00000258315.5	ENST00000546495.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	207.806255921231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAGCAAGGCCTGCACG	7014468	False	NA	NA	False	NA	NA	NA	7014494	7017375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
WTC11_00035878	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	287.05661462506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	7001886	True	NA	4	True	AAAACA	-5	NA	7014752	7017506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
WTC11_00035879	chr17	+	781	5	NIC	ENSG00000258315.5	novel	996	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_2	302.936461985018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGCTGTCTGCTTAAC	7001887	True	NA	19	True	AATAAA	-15	NA	7014753	7017521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017256
WTC11_00035881	chr17	+	681	6	NIC	ENSG00000258315.5	novel	850	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	272.062198770796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCGTGCTGTCTGCT	7001921	True	NA	15	True	AATAAA	-11	NA	7014787	7017517	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016526_7016909_7017015_7017260
WTC11_00035882	chr17	+	796	6	NIC	ENSG00000258315.5	novel	996	6	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	299.589719449784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCGTGCTGTCTGCT	7001930	True	NA	15	True	AATAAA	-11	NA	7014796	7017517	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016949_7017015_7017256
WTC11_00035883	chr17	+	717	5	NIC	ENSG00000258315.5	novel	850	6	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	303.449336792816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001943	True	NA	18	True	AATAAA	-14	NA	7014809	7017520	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017260
WTC11_00035884	chr17	+	3650	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	-123	0	-123	0	multi-exon	FALSE	canonical	2	15	junction_5	4.9749371855331	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	7022741	True	NA	23	True	AATAAA	-18	NA	7022926	7029644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
WTC11_00035885	chr17	+	223	1	FSM	ENSG00000174327.7	ENST00000575844.1	968	1	-65	810	17	-810	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGCCTCTCCAACCC	7035701	True	NA	NA	False	NA	NA	NA	7036031	7036254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7036000_7036300
WTC11_00035887	chr17	+	643	4	FSM	ENSG00000072778.20	ENST00000582356.5	633	4	-10	0	6	0	multi-exon	FALSE	canonical	3	602	junction_1	44.9172077889483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGAACGATCCCGCCA	NA	False	NA	NA	False	NA	NA	NA	7219849	7220922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220677_7220765
WTC11_00035888	chr17	+	760	5	FSM	ENSG00000072778.20	ENST00000582056.5	738	5	-22	0	-5	0	multi-exon	FALSE	canonical	3	602	junction_1	51.0459351956647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGGGCTAAGGTCTCTT	7207387	True	NA	NA	False	NA	NA	NA	7219872	7221136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765
WTC11_00035889	chr17	+	941	7	FSM	ENSG00000072778.20	ENST00000579286.5	933	7	-8	0	7	0	multi-exon	FALSE	canonical	3	602	junction_1	51.761203832815	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTGCCTCCCATTTCT	7207384	True	NA	NA	False	NA	NA	NA	7219869	7222081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951
WTC11_00035890	chr17	+	2204	19	FSM	ENSG00000072778.20	ENST00000350303.9	2191	19	-13	0	6	0	multi-exon	FALSE	canonical	3	19	junction_2	182.16605672359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	NA	False	NA	13	True	AATAAA	-15	NA	7219849	7225264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035891	chr17	+	2346	19	FSM	ENSG00000072778.20	ENST00000322910.9	2352	19	6	0	6	0	multi-exon	FALSE	canonical	3	472	junction_9	88.3547143934921	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGCTCCTGTGTGAC	NA	False	NA	14	True	AATAAA	-16	NA	7219849	7225265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035895	chr17	+	2143	20	FSM	ENSG00000072778.20	ENST00000356839.10	2184	20	-12	53	0	0	multi-exon	FALSE	canonical	3	472	junction_10	89.5400991895859	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCAAGAGCACTTACT	7207440	True	NA	-38	True	NA	NA	NA	7219925	7225213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035902	chr17	+	1015	10	FSM	ENSG00000072778.20	ENST00000583858.5	1015	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	243.723938144556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCAAGAGCACTTACT	7222748	False	NA	-38	True	NA	NA	NA	7222759	7225213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035903	chr17	+	1234	9	FSM	ENSG00000072778.20	ENST00000579425.5	1234	9	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	56.140448876011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTCTAGCCAGTCAT	7223020	False	NA	-4	True	NA	NA	NA	7223031	7225247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7223238_7223643_7223731_7223812_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035906	chr17	+	1016	9	FSM	ENSG00000072778.20	ENST00000542255.6	1016	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	255.341652252428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7223186	False	NA	15	True	AATAAA	-17	NA	7223197	7225266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224714_7224885_7224956
WTC11_00035913	chr17	+	718	5	FSM	ENSG00000072778.20	ENST00000578319.5	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_1	68.965117994534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7224205	False	NA	15	True	AATAAA	-17	NA	7224216	7225266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7224244_7224320_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00035916	chr17	+	827	7	FSM	ENSG00000170291.16	ENST00000356683.7	2404	7	285	1292	-32	-143	multi-exon	FALSE	canonical	3	59	junction_1	448.388379520354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTAGAGTCCCAGCCC	7251955	False	NA	NA	False	NA	NA	NA	7252023	7258639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
WTC11_00035917	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	433.064083017745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251761	True	NA	NA	False	AATAAA	-19	NA	7252052	7259931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
WTC11_00035918	chr17	+	478	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	-5	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	447.022370804863	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	7252031	False	NA	NA	False	NA	NA	NA	7252231	7254633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
WTC11_00035919	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	132	junction_7	431.921241875962	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
WTC11_00035920	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	419.015226453646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
WTC11_00035921	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_1	87.7319148821504	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	7251791	False	NA	30	True	AATAAA	-20	NA	7252375	7254906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
WTC11_00035923	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1582.7940611463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7305682	True	NA	-34	True	AATAAA	-28	NA	7306998	7312463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
WTC11_00035924	chr17	+	811	5	FSM	ENSG00000132507.18	ENST00000572815.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	287.704166636495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGAGCCTGGCCTGGCT	7104156	True	NA	NA	False	NA	NA	NA	7307581	7311868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311652_7311821
WTC11_00035925	chr17	+	1109	6	FSM	ENSG00000132507.18	ENST00000573542.5	1089	6	-20	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1584.39305729355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTGGGGACCAGCCC	7104156	True	NA	NA	False	NA	NA	NA	7307581	7312244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309596_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
WTC11_00035926	chr17	+	612	2	FSM	ENSG00000132507.18	ENST00000575001.1	609	2	-3	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATTCTTGGTTTTCACT	7104202	True	NA	NA	False	NA	NA	NA	7307627	7310101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309614
WTC11_00035927	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	260.314117942151	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7104202	True	NA	-34	True	AATAAA	-28	NA	7307627	7312463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
WTC11_00035928	chr17	+	1292	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	595	junction_1	1355.76065734332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7104527	False	NA	-42	True	AATAAA	-20	NA	7307952	7312455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
WTC11_00035930	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1572.00089058499	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7306544	True	NA	-42	True	AATAAA	-20	NA	7308370	7312455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
WTC11_00035931	chr17	+	2534	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	-23	0	-23	0	multi-exon	TRUE	canonical	3	96	junction_1	18.405855323893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7335118	True	NA	21	True	ATTAAA	-21	NA	7336505	7351477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
WTC11_00035932	chr17	+	778	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	-17	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	10.5237825899246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	7335192	True	NA	NA	False	ACTAAA	-14	NA	7336579	7342753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
WTC11_00035933	chr17	+	624	5	FSM	ENSG00000072818.12	ENST00000575425.1	614	5	-10	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	46.5053760333147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTGCCCCAATCTGTC	7335192	True	NA	NA	False	NA	NA	NA	7336579	7343561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7341947_7342068_7342274_7342329_7342415_7342475_7343378
WTC11_00035934	chr17	+	870	8	FSM	ENSG00000072818.12	ENST00000570457.6	870	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	42.6777196567722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGGGCCCCAGGGCAC	7335192	True	NA	NA	False	NA	NA	NA	7336579	7343953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337262_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860
WTC11_00035939	chr17	+	3054	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	0	-3	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGAAGGCTGTTGAG	7351871	False	NA	10	True	AATAAA	-19	NA	7351888	7354942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7351900_7354900
WTC11_00035940	chr17	+	323	2	FSM	ENSG00000174292.13	ENST00000575268.1	962	2	0	639	0	-379	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGACCCCTGCCCCGA	NA	False	NA	NA	False	NA	NA	NA	7381045	7383089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7381115_7382835
WTC11_00035941	chr17	+	463	3	FSM	ENSG00000174292.13	ENST00000577009.1	463	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTGACCCCATCACAG	7384194	True	NA	NA	False	NA	NA	NA	7384246	7386622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7384377_7384483_7384755_7386560
WTC11_00035943	chr17	+	4796	8	NNC	ENSG00000169992.10	novel	4374	8	NA	NA	-180	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.51841974088562	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	7404520	False	NA	27	True	TATAAA	-13	NA	7404693	7419860	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7404801_7405033_7405611_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
WTC11_00035944	chr17	+	2195	2	NNC	ENSG00000169992.10	novel	4980	7	NA	NA	1195	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	7406497	False	NA	27	True	TATAAA	-13	NA	7406550	7419860	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7406614_7417728
WTC11_00035945	chr17	+	1981	2	FSM	ENSG00000181284.3	ENST00000396568.1	1962	2	-19	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAAAGTGCCTCTGTGGG	7434588	True	NA	26	True	ATTAAA	-17	NA	7435434	7437523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7436086_7436193
WTC11_00035946	chr17	+	2521	5	FSM	ENSG00000161958.11	ENST00000575235.5	928	5	-22	-1571	-22	0	multi-exon	FALSE	canonical	3	16	junction_1	30.8463936303744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7438068	False	NA	-15	True	NA	NA	NA	7438250	7444902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593_7442793_7443075
WTC11_00035947	chr17	+	2927	4	ISM	ENSG00000161958.11	ENST00000575235.5	928	5	13	-1729	13	123	intron_retention	FALSE	canonical	3	16	junction_1	35.6121078036982	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACTTCCCCTGTGCTGGC	7437660	True	NA	NA	False	NA	NA	NA	7438285	7445060	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593
WTC11_00035949	chr17	+	4111	3	FSM	ENSG00000272884.1	ENST00000575331.1	5553	3	661	781	661	-781	multi-exon	FALSE	canonical	3	90	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTAGGCCCCGAAGG	7440149	False	NA	NA	False	GGGGCT	-44	NA	7440166	7445185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7441582_7441775_7441880_7442593
WTC11_00035950	chr17	+	2554	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	6	0	-6	multi-exon	TRUE	canonical	3	29	junction_1	37.7380444644393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAGCATGCATTGGTAA	7444767	True	NA	8	True	ATTAAA	-12	NA	7445060	7457704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
WTC11_00035951	chr17	+	947	8	FSM	ENSG00000170175.11	ENST00000570557.5	947	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	41.6271104753935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCGGAGCTACGGGA	7445045	False	NA	NA	False	NA	NA	NA	7445338	7455860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793
WTC11_00035952	chr17	+	1638	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	-15	0	-15	0	multi-exon	FALSE	canonical	3	88	junction_1	14.5381575411521	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	7444918	True	NA	NA	False	NA	NA	NA	7445487	7456926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
WTC11_00035953	chr17	+	6769	29	FSM	ENSG00000181222.19	ENST00000617998.6	6751	29	-18	0	-18	0	multi-exon	TRUE	canonical	1	231	junction_8	139.105909585584	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACATCGAGTGCTTC	7484317	False	NA	26	True	AATAAA	-22	NA	7484347	7514616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280_7499492_7500638_7500849_7500939_7501109_7501288_7501384_7501525_7501730_7501899_7502123_7502517_7502702_7503120_7503293_7503384_7503491_7503585_7503792_7508250_7508476_7508943_7509191_7509531_7509633_7511214_7511320_7511405_7511589_7511810_7512015_7512157_7512345_7512476_7512591_7512773_7512924_7513020
WTC11_00035954	chr17	+	2083	10	FSM	ENSG00000181222.19	ENST00000572844.1	2083	10	0	0	0	0	multi-exon	FALSE	canonical	1	231	junction_8	156.595570944731	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCAAATTTTATT	7475358	False	NA	NA	False	GATAAA	-16	NA	7484619	7499758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280
WTC11_00035955	chr17	+	984	3	FSM	ENSG00000181222.19	ENST00000575547.1	702	3	-159	-123	-159	123	multi-exon	FALSE	canonical	3	532	junction_1	91	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGAGTGGGTGCTTTGTC	7498654	False	NA	NA	False	NA	NA	NA	7498666	7500914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7499164_7499280_7499492_7500638
WTC11_00035957	chr17	+	548	3	FSM	ENSG00000181222.19	ENST00000576718.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCACGCTGCTCTTCA	7502906	False	NA	NA	False	NA	NA	NA	7502920	7503655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7503293_7503384_7503491_7503585
WTC11_00035960	chr17	+	1379	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	22	junction_1	5.18544972870135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	7548508	True	NA	NA	False	ATTAAA	-6	NA	7549055	7557881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
WTC11_00035961	chr17	+	1687	8	FSM	ENSG00000239697.11	ENST00000322272.11	1625	8	-62	0	-62	0	multi-exon	FALSE	canonical	2	6	junction_5	11.7212522838663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTCTTTATTGGGGC	7548980	False	NA	NA	False	ATTAAA	-15	NA	7548995	7557890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7553586_7553826_7556777_7556903_7557098
WTC11_00035962	chr17	+	1816	11	FSM	ENSG00000248871.1	ENST00000293826.4	1816	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	9.15914843203232	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7548551	True	NA	10	True	AATAAA	-16	NA	7549098	7561601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
WTC11_00035963	chr17	+	2036	5	FSM	ENSG00000161955.17	ENST00000349228.8	2036	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.80073525436772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGGCTCCATTTCCCCC	7558461	False	NA	9	True	AATAAA	-15	NA	7558475	7561600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7559298_7559623_7559703_7560048_7560168_7560349_7560489_7560723
WTC11_00035965	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	28.2851551171281	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7557674	True	NA	14	True	AATAAA	-22	NA	7561918	7571969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
WTC11_00035966	chr17	+	2222	12	FSM	ENSG00000161956.13	ENST00000429205.6	2222	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	158.838969342596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7562193	False	NA	14	True	AATAAA	-22	NA	7562225	7571969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571871_7571908
WTC11_00035968	chr17	+	812	5	NNC	ENSG00000161956.13	novel	2567	11	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_4	245.474413126908	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7570323	False	NA	14	True	AATAAA	-22	NA	7570355	7571969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7570494_7570680_7570765_7570882_7570934_7571372_7571855_7571912
WTC11_00035970	chr17	+	1852	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	-484	390	-483	0	multi-exon	FALSE	canonical	3	10776	junction_1	1273.99711538135	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	NA	False	NA	16	True	AATAAA	-10	NA	7572340	7578616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
WTC11_00035971	chr17	+	1797	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	-501	349	-483	0	multi-exon	FALSE	canonical	3	254	junction_9	4336.00741708172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	NA	False	NA	41	True	AATAAA	-35	NA	7572340	7578641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
WTC11_00035972	chr17	+	564	2	FSM	ENSG00000161960.16	ENST00000580886.5	562	2	-2	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTCATCCCAGCTTG	7340153	True	NA	-60	True	NA	NA	NA	7572823	7574782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259
WTC11_00035978	chr17	+	918	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	-2	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	4758.72789123912	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	7340153	True	NA	NA	False	NA	NA	NA	7572823	7577706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
WTC11_00035979	chr17	+	1332	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	-13	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	4294.18104066421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	7340153	True	NA	41	True	AATAAA	-35	NA	7572823	7578641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
WTC11_00035981	chr17	+	1992	9	FSM	ENSG00000161960.16	ENST00000578324.5	1577	9	-415	0	0	0	multi-exon	FALSE	canonical	3	13260	junction_4	785.816613466526	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	7573824	False	NA	16	True	AATAAA	-10	NA	7573843	7578616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7578245_7578341
WTC11_00035986	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.46969384566991	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	7579591	False	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
WTC11_00035987	chr17	+	518	3	FSM	ENSG00000129226.14	ENST00000584180.1	891	3	0	373	0	-373	multi-exon	FALSE	canonical	1	2	junction_2	1	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGAGTCACTGCGGTG	7580448	False	NA	NA	False	NA	NA	NA	7580494	7581249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7580586_7580710_7580784_7580895
WTC11_00035988	chr17	+	2141	1	FSM	ENSG00000129255.16	ENST00000582151.1	728	1	-1417	4	-1417	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCCAACCTTTATTAG	7582065	False	NA	NA	False	AATAAA	-12	NA	7582111	7584252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7582100_7584300
WTC11_00035989	chr17	+	1132	6	FSM	ENSG00000129255.16	ENST00000396501.8	1125	6	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	171.657100057061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGAGGCTGTGGCTGCCT	7579848	True	NA	NA	False	NA	NA	NA	7583820	7587955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586839_7587160_7587272_7587425
WTC11_00035991	chr17	+	1527	6	FSM	ENSG00000129255.16	ENST00000572836.5	1523	6	-4	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	24.9831943514035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAATAATACAAAACTGT	7579875	True	NA	-23	True	AATAAA	-14	NA	7583847	7588176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586778_7586898_7587272_7587425
WTC11_00035992	chr17	+	1420	7	FSM	ENSG00000129255.16	ENST00000250124.11	1416	7	-4	0	0	0	multi-exon	FALSE	canonical	3	400	junction_6	23.5920184243174	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTGTATGTTGTGCGG	7579875	True	NA	13	True	AATACA	-24	NA	7583847	7588212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
WTC11_00035993	chr17	+	3361	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	368	junction_5	19.437220880454	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	7647000	True	NA	16	True	AATAAA	-41	NA	7650905	7657770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
WTC11_00035994	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	17.763883459299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
WTC11_00035995	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	18.5280867873615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	7686478	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
WTC11_00035997	chr17	+	3221	5	FSM	ENSG00000108947.5	ENST00000226091.3	3216	5	-5	0	-5	0	multi-exon	TRUE	canonical	3	46	junction_2	2.23606797749979	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGGCTGGAGAATGAC	7704497	True	NA	11	True	AATAAA	-23	NA	7705196	7711372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7705721_7707957_7708251_7708434_7708528_7708634_7708740_7709166
WTC11_00035998	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	7854735	True	NA	5	True	AATAAA	-17	NA	7855065	7856099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7855285_7855444
WTC11_00035999	chr17	+	3746	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	-257	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	6.12825877028341	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	7857512	True	NA	11	True	AATAAA	-18	NA	7857745	7862282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
WTC11_00036000	chr17	+	579	2	FSM	ENSG00000182224.12	ENST00000574357.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTCGGACTGGGCCAA	7857729	True	NA	NA	False	NA	NA	NA	7858002	7858689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7858295_7858402
WTC11_00036004	chr17	+	4204	1	FSM	ENSG00000280046.1	ENST00000624171.1	7141	1	-118	3055	-118	-3055	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGCAGTTAGGAATTC	7858732	False	NA	NA	False	NA	NA	NA	7858824	7863028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7858800_7863000
WTC11_00036005	chr17	+	7373	40	FSM	ENSG00000170004.18	ENST00000380358.9	7361	40	-12	0	-12	0	multi-exon	FALSE	canonical	3	14	junction_1	22.6647232024467	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTCTGTTATTTTTT	7883799	True	NA	12	True	TATAAA	-16	NA	7884783	7912755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7885084_7889663_7889777_7890570_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894114_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970_7898103_7898495_7898596_7899010_7899203_7899342_7899544_7899895_7900034_7900289_7900412_7900557_7900732_7900851_7900994_7901243_7901376_7902609_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
WTC11_00036006	chr17	+	1573	10	FSM	ENSG00000170004.18	ENST00000452447.1	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	7.05183629005441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTACCATATGACCAGTC	7890721	False	NA	NA	False	AGTAAA	-8	NA	7890734	7898013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894126_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970
WTC11_00036007	chr17	+	4332	20	FSM	ENSG00000170004.18	ENST00000682063.1	4332	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14.2399305921306	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATACTTTCCTTTCTGTGT	NA	False	NA	-3	True	TATAAA	-1	NA	7902183	7912740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
WTC11_00036008	chr17	+	1263	8	FSM	ENSG00000170004.18	ENST00000439235.5	1263	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	32.4055928657322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGTGGGAGATGGCTG	7907676	False	NA	NA	False	NA	NA	NA	7907695	7911815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7907703_7907890_7908020_7908401_7908511_7908696_7908830_7909142_7909385_7910427_7910592_7910846_7910974_7911463
WTC11_00036010	chr17	+	784	5	FSM	ENSG00000170037.14	ENST00000576538.5	784	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	48.5128848863887	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGCAAACGCTTCCT	7929636	True	NA	NA	False	GGGGCT	-38	NA	7932100	7935145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7932139_7932927_7933350_7934137_7934223_7934464_7934547_7934988
WTC11_00036011	chr17	+	3754	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	15	0	15	0	multi-exon	FALSE	canonical	2	5	junction_17	37.6227620227732	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	7929705	True	NA	21	True	AATAAA	-15	NA	7932169	7949576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
WTC11_00036012	chr17	+	3886	19	FSM	ENSG00000170037.14	ENST00000563694.6	3996	19	0	110	0	-108	multi-exon	FALSE	canonical	3	104	junction_4	22.8687208881854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTGGAATTATGGGTGA	7929741	True	NA	NA	False	AATGAA	-9	NA	7932205	7949810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
WTC11_00036013	chr17	+	752	2	FSM	ENSG00000170037.14	ENST00000570782.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCTCCTGAGTGATT	7929777	True	NA	NA	False	NA	NA	NA	7932241	7933120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7932801_7932927
WTC11_00036014	chr17	+	3619	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	-838	2	0	0	multi-exon	FALSE	canonical	3	72	junction_17	26.7253982866532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	7929777	True	NA	21	True	AATAAA	-15	NA	7932241	7949576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
WTC11_00036021	chr17	+	581	3	FSM	ENSG00000178921.14	ENST00000585183.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	279.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTCGGGCCCAGGTAAG	8247599	True	NA	NA	False	NA	NA	NA	8247617	8254286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8247857_8253858_8254080_8254165
WTC11_00036022	chr17	+	4257	26	FSM	ENSG00000178921.14	ENST00000580356.5	4242	26	-15	0	-15	0	multi-exon	FALSE	canonical	1	4	junction_4	113.873712506443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTGTGTCTA	8234509	True	NA	NA	False	NA	NA	NA	8249270	8269430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255804_8255911_8256266_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
WTC11_00036023	chr17	+	5387	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	-18	0	-15	0	multi-exon	FALSE	canonical	3	380	junction_1	58.0448953530214	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	8234509	True	NA	14	True	AATAAA	-18	NA	8249270	8270486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
WTC11_00036026	chr17	+	2652	7	FSM	ENSG00000178921.14	ENST00000546020.2	2652	7	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	63.4288753031474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGGGTCCACAGATG	8265942	False	NA	19	True	AATAAA	-23	NA	8266005	8270491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532
WTC11_00036028	chr17	+	852	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	-21	0	-5	0	multi-exon	FALSE	canonical	3	296	junction_4	72.6476943887416	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	8286714	True	NA	NA	False	AATAAA	-17	NA	8288648	8290087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
WTC11_00036029	chr17	+	1079	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	431	junction_3	19.8662192343351	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	8286714	True	NA	NA	False	AATAAA	-20	NA	8288648	8290090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
WTC11_00036030	chr17	+	771	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	-22	0	-5	0	multi-exon	FALSE	canonical	3	55	junction_3	197.053856146542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286714	True	NA	NA	False	AATAAA	-22	NA	8288648	8290092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
WTC11_00036032	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286743	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257
WTC11_00036033	chr17	+	555	5	FSM	ENSG00000166579.16	ENST00000579880.5	551	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	10	junction_2	118.712888937975	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATAAGCAGGTCTCAGT	8431518	True	NA	NA	False	NA	NA	NA	8435856	8446780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8436046_8444259_8444358_8444953_8445041_8445710_8445865_8446753
WTC11_00036034	chr17	+	2373	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	-22	1	1	0	multi-exon	FALSE	canonical	3	187	junction_4	22.4220873247787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACGTTGCTTTATTCAG	8431523	True	NA	18	True	AATAAA	-18	NA	8435861	8468162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
WTC11_00036037	chr17	+	4208	1	FSM	ENSG00000166579.16	ENST00000578172.1	3927	1	-290	9	-290	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGATTGACGTTGC	NA	False	NA	9	True	AATAAA	-9	NA	8463945	8468153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8463900_8468200
WTC11_00036039	chr17	+	3520	15	FSM	ENSG00000154914.17	ENST00000570475.5	3500	15	-20	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	8.47234396403368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTGTAGGCAGCTCA	9644901	True	NA	NA	False	NA	NA	NA	9645516	9729037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_9646137_9656402_9656535_9666647_9666752_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701686_9709955_9710115_9711967_9712133_9727953
WTC11_00036040	chr17	+	4185	15	FSM	ENSG00000154914.17	ENST00000285199.12	4185	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	4.84715359352101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCATGGCTGTCTGAATT	9644901	True	NA	6	True	AATAAA	-16	NA	9645516	9729687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_9646137_9656402_9656535_9666647_9666752_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701701_9709955_9710115_9711967_9712133_9727953
WTC11_00036042	chr17	+	2637	4	FSM	ENSG00000154914.17	ENST00000573955.1	2641	4	4	0	4	0	multi-exon	FALSE	canonical	3	33	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACGCATGGCTGTCTGA	NA	False	NA	3	True	AATAAA	-13	NA	9701118	9729684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_9701701_9709955_9710115_9711967_9712133_9727953
WTC11_00036044	chr17	+	1590	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	23	-79	1	79	multi-exon	FALSE	canonical	3	17	junction_3	2.94392028877595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCACTCCCATCCCTGT	10696876	True	NA	NA	False	NA	NA	NA	10697616	10711637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
WTC11_00036046	chr17	+	1385	2	FSM	ENSG00000263400.8	ENST00000664973.1	1387	2	2	0	2	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTTTTGGCATAG	NA	False	NA	4	True	AATAAA	-18	NA	10766678	10769071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10766857_10767864
WTC11_00036047	chr17	+	3868	12	FSM	ENSG00000065559.15	ENST00000415385.7	3856	12	-12	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	92.6840362657583	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTTTGGAAGTGTTT	12016277	True	NA	41	True	ATTAAA	-31	NA	12020821	12143830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12032265_12032299_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
WTC11_00036049	chr17	+	3785	11	FSM	ENSG00000065559.15	ENST00000353533.10	3778	11	-7	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	17.1172427686237	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	12016325	True	NA	39	True	ATTAAA	-29	NA	12020869	12143828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
WTC11_00036050	chr17	+	3682	10	FSM	ENSG00000065559.15	ENST00000602811.5	1136	10	0	-2546	0	0	multi-exon	FALSE	canonical	3	25	junction_1	69.3333333333333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	12016325	True	NA	39	True	ATTAAA	-29	NA	12020869	12143828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
WTC11_00036051	chr17	+	3507	9	FSM	ENSG00000065559.15	ENST00000602305.5	961	9	0	-2546	0	0	multi-exon	FALSE	canonical	3	24	junction_1	73.821998753759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	12016325	True	NA	39	True	ATTAAA	-29	NA	12020869	12143828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
WTC11_00036052	chr17	+	4286	20	FSM	ENSG00000006740.18	ENST00000340825.7	4211	20	-76	1	-35	0	multi-exon	TRUE	canonical	3	75	junction_18	13.9068926094172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGCATCTGTTCTTGC	12787728	True	NA	10	True	ATTAAA	-19	NA	12789462	12991642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12974088_12974311_12980057_12980234_12984530_12984909_12990031
WTC11_00036058	chr17	+	2906	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	-8	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	34.9638702408961	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	14064994	True	NA	11	True	AATAAA	-15	NA	14069495	14208677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
WTC11_00036059	chr17	+	3108	3	FSM	ENSG00000125430.9	ENST00000466596.5	2808	3	-38	-262	-36	2	multi-exon	FALSE	canonical	2	6	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTACCTTTATGTTTT	14300058	True	NA	16	True	AATAAA	-17	NA	14301044	14349406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14302073_14345027_14345703_14348001
WTC11_00036060	chr17	+	5393	2	FSM	ENSG00000125430.9	ENST00000360954.3	5369	2	-20	-4	-20	4	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACCTTTATGTTTTCT	14300074	True	NA	18	True	AATAAA	-19	NA	14301060	14349408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14302073_14345027
WTC11_00036061	chr17	+	1652	1	FSM	ENSG00000266709.1	ENST00000583262.1	1652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTCTTTGTGATTT	14302867	False	NA	1	True	ATTAAA	-13	NA	14303853	14305505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14303900_14305500
WTC11_00036062	chr17	+	4275	1	FSM	ENSG00000223878.1	ENST00000452091.1	489	1	-2719	-1067	-2719	1067	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGGCCAAAATGGGCCA	NA	False	NA	NA	False	AATAGA	-44	NA	15504146	15508421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15504100_15508400
WTC11_00036067	chr17	+	5397	6	FSM	ENSG00000187607.16	ENST00000421016.5	5541	6	144	0	2	0	multi-exon	FALSE	canonical	3	59	junction_5	53.3051592249756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTTGTAAATTGCT	15693738	True	NA	5	True	AATAAA	-22	NA	15699720	15720782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
WTC11_00036068	chr17	+	5461	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	-18	0	2	0	multi-exon	FALSE	canonical	3	78	junction_1	42.4358339142758	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693738	True	NA	10	True	AATAAA	-27	NA	15699720	15720787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
WTC11_00036069	chr17	+	5714	5	NIC	ENSG00000187607.16	novel	5443	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	107	junction_4	31.1608729017658	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTTGTAAATTGCT	15693750	True	NA	5	True	AATAAA	-22	NA	15699732	15720782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
WTC11_00036071	chr17	+	5660	5	FSM	ENSG00000187607.16	ENST00000464847.6	5616	5	-44	0	-6	0	multi-exon	FALSE	canonical	3	59	junction_4	51.254268114958	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693750	True	NA	10	True	AATAAA	-27	NA	15699732	15720787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
WTC11_00036072	chr17	+	812	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	20	12363	6	0	5prime_fragment	FALSE	canonical	3	78	junction_1	43.222534631833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	15693776	True	NA	10	True	AATAAA	-22	NA	15699758	15708424	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
WTC11_00036076	chr17	+	690	1	FSM	ENSG00000276855.1	ENST00000612568.1	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTGTCTAAAAGTGG	15788668	False	NA	15	True	AATAAA	-24	NA	15789015	15789705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15789000_15789700
WTC11_00036077	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	15945052	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15945584_15974678
WTC11_00036078	chr17	+	676	2	FSM	ENSG00000011295.16	ENST00000583704.1	552	2	0	-124	0	124	multi-exon	FALSE	canonical	3	433	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCTGAAAATGGCAACTT	15995913	True	NA	NA	False	NA	NA	NA	15999823	16000584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117
WTC11_00036079	chr17	+	1382	10	FSM	ENSG00000011295.16	ENST00000497842.6	1360	10	-22	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	249.592111698712	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGAATAATGTCTAGT	15995891	True	NA	NA	False	NA	NA	NA	15999801	16027535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16024488_16024583_16025016_16025172_16026539_16026703_16027373
WTC11_00036080	chr17	+	3767	10	FSM	ENSG00000011295.16	ENST00000475723.5	2591	10	21	-1197	-1	579	multi-exon	FALSE	canonical	3	64	junction_2	179.539809540604	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCATAGACCCCCTAAGTA	15995912	True	NA	NA	False	NA	NA	NA	15999822	16029983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117_16000383_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
WTC11_00036081	chr17	+	3050	10	FSM	ENSG00000011295.16	ENST00000261647.10	3050	10	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	73.8839597353366	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTCACTGGAGTTTTC	15995913	True	NA	1	True	ATTAAA	-15	NA	15999823	16029404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
WTC11_00036082	chr17	+	2458	9	NIC	ENSG00000011295.16	novel	2591	10	NA	NA	49	0	intron_retention	FALSE	canonical	3	528	junction_6	54.2607996162976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	15995972	True	NA	19	True	AATAAA	-19	NA	15999882	16028786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
WTC11_00036083	chr17	+	3919	3	FSM	ENSG00000011295.16	ENST00000481107.1	3075	3	-844	0	-844	0	multi-exon	FALSE	canonical	3	599	junction_2	33	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	NA	False	NA	19	True	AATAAA	-19	NA	16022828	16028786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16025172_16026539_16026703_16027373
WTC11_00036084	chr17	+	4398	2	FSM	ENSG00000011295.16	ENST00000465567.1	2801	2	-1597	0	-652	0	multi-exon	FALSE	canonical	3	665	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	NA	False	NA	19	True	AATAAA	-19	NA	16023020	16028786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16025172_16026539
WTC11_00036085	chr17	+	883	1	FSM	ENSG00000227782.2	ENST00000442828.2	802	1	38	-119	38	119	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAAAGTTCTTTTTTTT	NA	False	NA	NA	False	AAAAAG	-44	NA	16040509	16041392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16040500_16041400
WTC11_00036086	chr17	+	341	1	FSM	ENSG00000243686.2	ENST00000453002.2	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTATAACGTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	16044620	16044961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16044600_16045000
WTC11_00036087	chr17	+	942	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	-54	0	1	0	multi-exon	FALSE	canonical	3	73	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	16214712	True	NA	14	True	AATAAA	-25	NA	16217191	16218219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16217547
WTC11_00036088	chr17	+	2274	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	-196	-789	-177	789	multi-exon	FALSE	canonical	3	46	junction_2	13.29995822884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAGGAGAGTGTGGTAG	16216894	False	NA	NA	False	NA	NA	NA	16217013	16327200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
WTC11_00036089	chr17	+	699	3	FSM	ENSG00000108474.17	ENST00000431149.5	699	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACGGGACTCAACTGC	NA	False	NA	NA	False	NA	NA	NA	16326484	16347674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16326906_16342572_16342721_16347544
WTC11_00036090	chr17	+	704	3	FSM	ENSG00000170315.14	ENST00000535788.1	704	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTGGTGTTTTGTC	16283729	True	NA	18	True	AATAAA	-17	NA	16381090	16382739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381185_16381901_16382131_16382358
WTC11_00036091	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6034	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283729	True	NA	19	True	AATAAA	-18	NA	16381090	16382740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381185_16381901
WTC11_00036092	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283928	False	NA	19	True	AATAAA	-18	NA	16381289	16382740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381463_16381901
WTC11_00036093	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16377731	True	NA	19	True	AATAAA	-18	NA	16381340	16382740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381516_16381901
WTC11_00036095	chr17	+	1102	5	FSM	ENSG00000175061.19	ENST00000475947.7	1217	5	115	0	60	0	multi-exon	FALSE	canonical	3	2296	junction_1	469.010327711448	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCAGATATTCGCTCT	NA	False	NA	31	True	AGTAAA	-26	NA	16438881	16442076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16441367
WTC11_00036096	chr17	+	1074	6	FSM	ENSG00000175061.19	ENST00000667979.2	1066	6	-18	10	0	0	multi-exon	FALSE	canonical	3	261	junction_2	1289.53935961645	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	NA	False	NA	-27	True	AATAAA	-20	NA	16438974	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
WTC11_00036097	chr17	+	1137	6	FSM	ENSG00000175061.19	ENST00000660020.1	1129	6	-8	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1195.25521960793	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438974	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16441367
WTC11_00036098	chr17	+	904	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	-7	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	1066.95860588247	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438974	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
WTC11_00036099	chr17	+	1945	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	-15	0	0	0	multi-exon	FALSE	canonical	3	3396	junction_2	43.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	16369181	True	NA	-43	True	AATAAA	-4	NA	16439000	16442002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16440254_16441073_16441131_16441367
WTC11_00036100	chr17	+	1709	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	-24	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	540.219914067924	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369167	True	NA	-27	True	AATAAA	-20	NA	16438986	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
WTC11_00036101	chr17	+	1044	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	-9	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	725.442063503351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369181	True	NA	-27	True	AATAAA	-20	NA	16439000	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
WTC11_00036102	chr17	+	1176	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	-17	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	486.548615819175	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369167	True	NA	-27	True	AATAAA	-20	NA	16438986	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
WTC11_00036107	chr17	+	1079	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	0	29	0	-3	multi-exon	FALSE	canonical	3	455	junction_2	1263.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	16369217	True	NA	-46	True	AATAAA	-1	NA	16439036	16441999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16440184_16440254_16441367
WTC11_00036108	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1139.97442405521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	16369217	True	NA	-29	True	AATAAA	-18	NA	16439036	16442016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
WTC11_00036109	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	1022.74908335329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
WTC11_00036110	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	803.507739539577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
WTC11_00036111	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	261	junction_2	794.402448384948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	16369217	True	NA	-22	True	AATAAA	-25	NA	16439036	16442023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
WTC11_00036112	chr17	+	1209	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	1448.64443101128	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
WTC11_00036113	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1422.91354621425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
WTC11_00036114	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	218.572642386919	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
WTC11_00036119	chr17	+	632	1	FSM	ENSG00000231458.2	ENST00000419919.2	790	1	108	50	108	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTTCGTGGCACTGG	NA	False	NA	NA	False	AAGAAA	-42	NA	16683545	16684177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16683500_16684200
WTC11_00036120	chr17	+	590	3	FSM	ENSG00000188933.16	ENST00000444558.5	3751	3	1577	1584	0	-69	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCCAGATTGGCAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	16796042	16800059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16796235_16798241_16798531_16799950
WTC11_00036121	chr17	+	4232	24	FSM	ENSG00000133030.22	ENST00000341712.8	3846	24	-392	6	0	0	multi-exon	FALSE	canonical	3	111	junction_1	31.1831591406108	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATCCCCGGCCCCTCT	17039177	True	NA	73	True	ATTAAA	-7	NA	17042456	17185554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
WTC11_00036122	chr17	+	4116	23	NIC	ENSG00000133030.22	novel	3846	24	NA	NA	2	0	intron_retention	FALSE	canonical	3	15	junction_18	41.8572199208707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	17039179	True	NA	79	True	ATTAAA	-13	NA	17042458	17185560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
WTC11_00036123	chr17	+	10960	23	FSM	ENSG00000133030.22	ENST00000395811.9	10960	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_22	42.4927801354108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTGTAATGAGATTT	17042720	False	NA	22	True	AATAAA	-22	NA	17042759	17192648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17184822
WTC11_00036124	chr17	+	3195	18	FSM	ENSG00000133030.22	ENST00000584067.5	3195	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	57.4904234540618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATCCCCGGCCCCTCT	17131643	False	NA	73	True	ATTAAA	-7	NA	17131665	17185554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17184822
WTC11_00036128	chr17	+	1693	1	FSM	ENSG00000278864.1	ENST00000624039.1	1754	1	130	-69	130	69	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGCCTCCCATGTAG	17181619	False	NA	NA	False	NA	NA	NA	17181633	17183326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17181600_17183300
WTC11_00036129	chr17	+	1639	5	FSM	ENSG00000205309.14	ENST00000616989.1	1635	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_4	35.7106426713382	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGGCCTGCCCTAA	17302580	True	NA	7	True	AATAAA	-22	NA	17303330	17347661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344927_17346804
WTC11_00036131	chr17	+	1588	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.9602092806665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17302615	True	NA	9	True	AATAAA	-24	NA	17303365	17347663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
WTC11_00036133	chr17	+	598	1	FSM	ENSG00000141026.6	ENST00000585041.1	679	1	-4	85	2	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTCACTTTAGTTCCT	17474180	True	NA	24	True	ATTAAA	-38	NA	17477001	17477599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17477000_17477600
WTC11_00036134	chr17	+	2233	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	-24	0	-18	0	multi-exon	FALSE	canonical	3	91	junction_1	0	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	17474154	True	NA	16	True	ATTAAA	-27	NA	17476975	17493221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17477266_17491278
WTC11_00036135	chr17	+	7846	6	FSM	ENSG00000108557.20	ENST00000353383.6	7677	6	-169	0	-169	0	multi-exon	FALSE	canonical	3	8	junction_1	8.56971411425142	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCCGTGGATTCCG	NA	False	NA	NA	False	AATAAA	-24	NA	17681288	17811453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17681794_17724027_17724160_17792932_17798514_17803755_17803850_17809389_17809440_17809969
WTC11_00036136	chr17	+	4139	6	FSM	ENSG00000141034.10	ENST00000268719.9	4122	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	98	junction_3	26.5887194125629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCCTATTTGTAAACC	18036261	True	NA	22	True	AATAAA	-17	NA	18039390	18068405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18058867_18058970_18061844_18061976_18065179
WTC11_00036137	chr17	+	1266	4	FSM	ENSG00000141034.10	ENST00000376345.3	1391	4	0	125	0	-125	multi-exon	FALSE	canonical	2	3	junction_3	73.834650101125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACTTGAACCTGGGAGG	18036315	True	NA	NA	False	NA	NA	NA	18039444	18057342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18056702
WTC11_00036140	chr17	+	943	4	FSM	ENSG00000108591.10	ENST00000577771.5	641	4	22	-324	-7	-128	multi-exon	FALSE	canonical	3	246	junction_2	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTAGGTCTGTAAAGGA	18083998	True	NA	NA	False	ATTAAA	-38	NA	18087913	18099534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016
WTC11_00036142	chr17	+	1907	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	-7	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	15.5929114949354	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	18084025	True	NA	9	True	AATAAA	-14	NA	18087940	18107969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
WTC11_00036145	chr17	+	5342	9	FSM	ENSG00000108591.10	ENST00000582528.5	5342	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_7	12.9228479833201	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	18095695	False	NA	10	True	AATAAA	-15	NA	18095721	18107970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18098360_18099016_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
WTC11_00036146	chr17	+	3847	4	FSM	ENSG00000091542.9	ENST00000399138.5	3159	4	-688	0	62	0	multi-exon	FALSE	canonical	3	846	junction_2	32.0659043568433	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGTTGTTGT	18182991	False	NA	21	True	AATAAA	-25	NA	18183139	18209954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18185014_18194954_18195036_18206814_18206971_18208218
WTC11_00036147	chr17	+	4226	23	FSM	ENSG00000131899.12	ENST00000316843.9	4212	23	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_4	3.4858035581887	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCACATCTGCTTTA	18218919	True	NA	48	True	AATAAA	-21	NA	18225620	18244875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18225764_18229940_18230039_18232494_18232577_18232671_18232803_18233777_18233937_18234012_18234176_18234272_18234409_18234648_18234704_18234838_18234994_18235088_18235313_18235469_18235538_18236606_18236761_18236834_18236940_18237480_18237774_18238066_18238215_18238455_18238610_18240577_18240874_18241450_18241716_18241884_18242000_18242165_18242279_18242507_18242629_18242742_18242823_18243907
WTC11_00036148	chr17	+	3226	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	10	0	-10	multi-exon	FALSE	canonical	3	57	junction_1	5.79271573232759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAAATTAGCATCTC	18259390	True	NA	NA	False	AATAAA	-21	NA	18260661	18266542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
WTC11_00036149	chr17	+	3034	3	FSM	ENSG00000177427.13	ENST00000395703.8	718	3	-49	-2267	-42	1	multi-exon	FALSE	canonical	3	57	junction_1	2.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCTGGATAAGGGAGTC	18259283	True	NA	19	True	AATAAA	-28	NA	18260554	18265782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18260738_18262713_18262868_18263085
WTC11_00036150	chr17	+	394	1	FSM	ENSG00000227077.3	ENST00000442562.1	210	1	-28	-156	-28	156	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAAATAGAAGTGTCAT	NA	False	NA	NA	False	AATAAA	-35	NA	18572723	18573117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18572700_18573100
WTC11_00036151	chr17	+	775	1	FSM	ENSG00000174977.8	ENST00000447794.1	1348	1	774	-201	774	201	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	AATAAA	-36	NA	18650968	18651743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18651000_18651700
WTC11_00036152	chr17	+	1185	1	FSM	ENSG00000224126.2	ENST00000428091.2	497	1	-504	-184	-504	184	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATTCCCTTAAGATAA	NA	False	NA	NA	False	AATAAA	-42	NA	18676756	18677941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18676800_18677900
WTC11_00036153	chr17	+	771	1	FSM	ENSG00000224126.2	ENST00000428091.2	497	1	0	-274	0	274	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATCTGCATATACATAA	NA	False	NA	NA	False	NA	NA	NA	18677260	18678031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18677300_18678000
WTC11_00036154	chr17	+	576	6	FSM	ENSG00000108448.23	ENST00000581904.6	576	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5.2687759489278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCACCCAGTTAGACTT	18697594	True	NA	NA	False	NA	NA	NA	18698007	18722245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18698115_18699153_18699276_18701356_18701446_18704618_18704766_18705062_18705165_18722236
WTC11_00036155	chr17	+	2046	5	FSM	ENSG00000108448.23	ENST00000641936.1	2048	5	-1	3	-1	3	multi-exon	FALSE	canonical	3	11	junction_4	3.67423461417477	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCCAGATACCGTT	NA	False	NA	12	True	AATAAA	-19	NA	18722021	18736115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
WTC11_00036156	chr17	+	1879	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	-3	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	49.2375195692607	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18778978	True	NA	NA	False	TATAAA	-21	NA	18781179	18806714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
WTC11_00036157	chr17	+	4354	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	-27	-1338	0	1338	multi-exon	FALSE	canonical	3	95	junction_1	110.38832969718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGTTCAGATGCTGTT	18779085	True	NA	NA	False	AGTAAA	-21	NA	18781286	18808052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
WTC11_00036159	chr17	+	2625	4	FSM	ENSG00000171928.14	ENST00000482741.1	3298	4	673	0	673	0	multi-exon	FALSE	canonical	3	378	junction_2	23.8374122383748	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	NA	False	NA	NA	False	TATAAA	-21	NA	18796478	18806714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18797669_18798811_18798944_18804137_18804267_18805540
WTC11_00036160	chr17	+	985	1	FSM	ENSG00000265478.2	ENST00000584957.2	985	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAATGGTGGAGTATGG	18809936	False	NA	NA	False	ATTAAA	-21	NA	18809955	18810940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18810000_18810900
WTC11_00036164	chr17	+	976	9	FSM	ENSG00000141127.15	ENST00000412418.5	968	9	-8	0	-8	0	multi-exon	FALSE	canonical	3	108	junction_1	84.6286003665428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGACCTCTTTTATT	18852088	True	NA	NA	False	NA	NA	NA	18858121	18923984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913
WTC11_00036165	chr17	+	1967	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	-9	0	-8	0	multi-exon	FALSE	canonical	3	175	junction_1	70.6441437156847	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18852088	True	NA	35	True	AATAAA	-36	NA	18858121	18931287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
WTC11_00036166	chr17	+	1841	10	FSM	ENSG00000141127.15	ENST00000536323.5	1872	10	31	0	3	0	multi-exon	FALSE	canonical	3	34	junction_2	123.031261710285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18852065	True	NA	35	True	AATAAA	-36	NA	18858098	18931287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
WTC11_00036167	chr17	+	1850	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18852090	True	NA	16	True	AATAAA	-17	NA	18858123	18931268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
WTC11_00036168	chr17	+	663	1	FSM	ENSG00000265185.6	ENST00000577988.2	758	1	206	-111	206	111	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCGCCCGCCTCGGCC	NA	False	NA	NA	False	NA	NA	NA	19062117	19062780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19062100_19062800
WTC11_00036169	chr17	+	402	3	FSM	ENSG00000230197.6	ENST00000435028.6	428	3	-11	37	-3	-37	multi-exon	FALSE	canonical	1	3	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGTGATAAGGGAAATA	NA	False	NA	NA	False	NA	NA	NA	19077771	19087841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19077914_19079987_19080121_19087714
WTC11_00036170	chr17	+	4550	10	NIC	ENSG00000072134.16	novel	3860	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_1	66.4035548654244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	NA	False	NA	29	True	TATAAA	-25	NA	19237084	19336715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_19237126_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
WTC11_00036171	chr17	+	418	2	FSM	ENSG00000072134.16	ENST00000582659.5	404	2	-14	0	5	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTGTACCCCTTTCCC	19231357	True	NA	NA	False	NA	NA	NA	19237381	19274318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19237532_19274050
WTC11_00036172	chr17	+	2230	8	FSM	ENSG00000072134.16	ENST00000395618.7	2216	8	-14	0	5	0	multi-exon	FALSE	canonical	3	10	junction_1	68.095371295241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAACAGCAAC	19231357	True	NA	131	True	AAGAAA	-41	NA	19237381	19335174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19237532_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
WTC11_00036173	chr17	+	4671	10	FSM	ENSG00000072134.16	ENST00000347697.6	4664	10	-7	0	4	0	multi-exon	FALSE	canonical	3	172	junction_8	20.1218510303821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	19231345	True	NA	29	True	TATAAA	-25	NA	19237369	19336715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
WTC11_00036180	chr17	+	5257	4	NIC	ENSG00000072134.16	novel	4664	10	NA	NA	-897	0	intron_retention	FALSE	canonical	3	18	junction_1	82.0988564002095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	19312000	False	NA	29	True	TATAAA	-25	NA	19312014	19336715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_19312145_19328710_19328888_19329560_19329648_19331852
WTC11_00036182	chr17	+	3149	7	FSM	ENSG00000166484.20	ENST00000308406.9	3149	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	76.1985709985576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGTGTAATTTTTGG	NA	False	NA	12	True	AATACA	-20	NA	19377720	19383543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378102_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
WTC11_00036184	chr17	+	2999	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	60	0	31	0	multi-exon	FALSE	canonical	3	121	junction_1	47.1925723910966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19378273	False	NA	13	True	AATACA	-21	NA	19378312	19383544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
WTC11_00036186	chr17	+	3392	7	NIC	ENSG00000166484.20	novel	3059	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_3	77.4395821843642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	19374695	True	NA	7	True	AATACA	-15	NA	19378467	19383538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_19378543_19378895_19379133_19379781_19380502_19380607_19381687_19381780_19382467_19382812_19382947_19383077
WTC11_00036188	chr17	+	2935	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	-39	6	-9	0	multi-exon	FALSE	canonical	3	77	junction_1	61.4367334924491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	19374686	True	NA	7	True	AATACA	-15	NA	19378458	19383538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
WTC11_00036189	chr17	+	4533	3	FSM	ENSG00000166484.20	ENST00000570306.5	4533	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	19374756	True	NA	7	True	AATACA	-15	NA	19378528	19383538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19382467_19382812_19382947_19383077
WTC11_00036192	chr17	+	2867	5	FSM	ENSG00000166484.20	ENST00000490660.2	2867	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	23.3706546763243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19378863	False	NA	13	True	AATACA	-21	NA	19378891	19383544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19379133_19379781_19379948_19380607_19382467_19382812_19382947_19383077
WTC11_00036193	chr17	+	664	4	FSM	ENSG00000128482.16	ENST00000574149.6	1083	4	155	264	101	-254	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCGGGGCGGGGCAG	19411321	False	NA	NA	False	NA	NA	NA	19411332	19413144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19411463_19411629_19411671_19412497_19412784_19412937
WTC11_00036194	chr17	+	599	1	FSM	ENSG00000228331.2	ENST00000422360.2	586	1	5	-18	5	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAATTAAAAGGAAAACA	NA	False	NA	NA	False	ATTAAA	-5	NA	19496947	19497546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19496900_19497500
WTC11_00036195	chr17	+	3279	17	FSM	ENSG00000142494.13	ENST00000270570.8	3280	17	0	1	0	-1	multi-exon	TRUE	canonical	2	5	junction_10	3.76662979332984	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCCTCTACATTTTTG	19533705	True	NA	10	True	AATAAA	-14	NA	19533853	19579033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19534075_19542392_19542495_19546434_19546504_19547984_19548134_19549634_19549678_19551423_19551469_19555211_19555310_19555592_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
WTC11_00036196	chr17	+	1342	9	FSM	ENSG00000142494.13	ENST00000575377.5	1362	9	20	0	20	0	multi-exon	FALSE	canonical	1	1	junction_1	5.81888090615369	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTTAGATTACTATTCA	NA	False	NA	NA	False	AATATA	-22	NA	19555592	19577937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19555691_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
WTC11_00036197	chr17	+	316	1	FSM	ENSG00000266079.5	ENST00000578183.1	701	1	348	37	348	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTTATACTTTCCC	NA	False	NA	NA	False	NA	NA	NA	19557558	19557874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19557600_19557900
WTC11_00036200	chr17	+	3626	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	196	0	-1	0	multi-exon	FALSE	canonical	2	8	junction_7	159.282718381499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	19648683	False	NA	19	True	TATAAA	-16	NA	19648721	19677590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
WTC11_00036201	chr17	+	3950	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	-187	65	38	0	multi-exon	FALSE	canonical	3	11	junction_9	195.273654136957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	19648525	False	NA	-40	True	NA	NA	NA	19648563	19677531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
WTC11_00036202	chr17	+	3708	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	369	junction_9	81.0442646922419	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19648718	False	NA	25	True	TATAAA	-22	NA	19648745	19677596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
WTC11_00036203	chr17	+	3284	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	-8	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	183.917572486665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	19640116	True	NA	-40	True	NA	NA	NA	19648777	19677531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
WTC11_00036206	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	172.528937790157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	19640144	False	NA	2	True	AATAAA	-13	NA	19648805	19675742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
WTC11_00036209	chr17	+	4254	7	FSM	ENSG00000072210.19	ENST00000672608.1	4254	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	85.3862140837475	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTTAGATAAAATTGCAC	19654895	False	NA	-7	True	CATAAA	-2	NA	19654905	19677379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
WTC11_00036210	chr17	+	2256	12	FSM	ENSG00000128487.19	ENST00000581399.6	2251	12	0	-5	0	0	multi-exon	FALSE	canonical	3	126	junction_1	33.2185351028634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCAGGGCAACCTGGAA	20149706	True	NA	-9	True	AATAAA	-5	NA	20155993	20314734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
WTC11_00036211	chr17	+	8132	13	FSM	ENSG00000128487.19	ENST00000395530.6	8133	13	1	0	1	0	multi-exon	FALSE	canonical	3	105	junction_1	39.3463961359727	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTCACTGACATTT	20149702	True	NA	NA	False	AATAAA	-20	NA	20155989	20319026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
WTC11_00036212	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	92.3752537208965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	20149770	True	NA	NA	False	NA	NA	NA	20156057	20239273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
WTC11_00036213	chr17	+	2982	6	FSM	ENSG00000128487.19	ENST00000395522.6	2982	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	92.4238064569946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAAGGCCCAAGTTCTA	20149795	True	NA	NA	False	NA	NA	NA	20156082	20237610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232415_20236859
WTC11_00036216	chr17	+	1770	1	FSM	ENSG00000188013.6	ENST00000418141.2	1075	1	-468	-227	-468	227	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCCTGGGACCCGAG	20588694	True	NA	NA	False	NA	NA	NA	20588824	20590594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20588800_20590600
WTC11_00036217	chr17	+	1205	1	FSM	ENSG00000226549.3	ENST00000455244.2	1081	1	-215	91	-215	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTCTGGCCTACGACCA	NA	False	NA	NA	False	NA	NA	NA	20784429	20785634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20784400_20785600
WTC11_00036218	chr17	+	341	1	NIC	ENSG00000226981.2	novel	1044	4	NA	NA	26067	-3230	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGGCGGCGCCCGCCA	NA	False	NA	NA	False	NA	NA	NA	20840686	20841027	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_20840700_20841000
WTC11_00036219	chr17	+	432	1	Genic_Genomic	ENSG00000226981.2	novel	NA	NA	NA	NA	29443	237	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAGAACACAATATCTG	NA	False	NA	NA	False	ATTAAA	-27	NA	20844062	20844494	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_+_20844100_20844500
WTC11_00036220	chr17	+	1608	1	FSM	ENSG00000266369.1	ENST00000578888.1	1372	1	6	-242	6	242	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTTGTAGTCAGGAAA	20855937	False	NA	NA	False	NA	NA	NA	20855951	20857559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20856000_20857600
WTC11_00036222	chr17	+	5738	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	-50	-2306	-14	2306	multi-exon	FALSE	canonical	3	109	junction_2	24.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATCTGGTGCGTATGG	20862716	True	NA	NA	False	NA	NA	NA	20868469	20907536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20892229_20892433_20902217
WTC11_00036223	chr17	+	1763	5	NIC	ENSG00000233098.10	novel	1488	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	47.8297762905076	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTTATCTGAATGTGA	20862716	True	NA	NA	False	AATAAA	-24	NA	20868469	20930041	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358_20924834_20929430
WTC11_00036224	chr17	+	1272	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	21	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	56.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862751	True	NA	NA	False	AATAAA	-29	NA	20868504	20930046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20924358_20924834_20929430
WTC11_00036225	chr17	+	1467	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	21	0	3	0	multi-exon	FALSE	canonical	3	78	junction_2	37.9502598439355	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTTATCTGAATGTGA	20862754	True	NA	NA	False	AATAAA	-24	NA	20868507	20930041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
WTC11_00036226	chr17	+	1051	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	-29	888	-12	-888	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTATGTTACAGGCACT	21125222	True	NA	NA	False	NA	NA	NA	21126934	21127985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21126900_21128000
WTC11_00036227	chr17	+	2175	7	FSM	ENSG00000109016.18	ENST00000395511.8	1253	7	-312	-610	-295	585	multi-exon	TRUE	canonical	3	93	junction_1	17.7082843136576	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTCAAGTTCATTTCTAG	21126636	False	NA	NA	False	ATTAAA	-25	NA	21126651	21192030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21126992_21172017_21172197_21178232_21178343_21183593_21183811_21184370_21184464_21188710_21188864_21190947
WTC11_00036228	chr17	+	1589	6	FSM	ENSG00000109016.18	ENST00000346603.4	1567	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	119	junction_1	8.59302042357634	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTAGTCTTCCAGG	NA	False	NA	14	True	AATAAA	-14	NA	21171651	21191418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21172197_21178232_21178343_21183593_21183811_21184370_21184464_21188710_21188864_21190947
WTC11_00036229	chr17	+	2270	12	FSM	ENSG00000034152.19	ENST00000342679.9	2256	12	-14	0	-13	0	multi-exon	FALSE	canonical	3	130	junction_1	15.6321347346943	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	21282700	True	NA	84	True	ATTAAA	-17	NA	21284696	21315232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
WTC11_00036230	chr17	+	535	2	FSM	ENSG00000034152.19	ENST00000527123.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGCATGGGCAGAGGC	21312116	True	NA	NA	False	NA	NA	NA	21312141	21313886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21312282_21313491
WTC11_00036231	chr17	+	5177	3	FSM	ENSG00000184185.10	ENST00000583088.6	5263	3	86	0	86	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCTGTGTTGAGATGT	21376313	False	NA	6	True	ATTAAA	-20	NA	21376442	21419870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21376914_21408518_21408641_21415286
WTC11_00036232	chr17	+	432	1	FSM	ENSG00000244582.2	ENST00000482905.2	502	1	-20	90	-20	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGGAGAACCAATGGGA	NA	False	NA	NA	False	ACTAAA	-27	NA	21504537	21504969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21504500_21505000
WTC11_00036233	chr17	+	672	1	FSM	ENSG00000263563.7	ENST00000583708.6	917	1	17	228	17	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCGTGAAGACCCTGAC	NA	False	NA	NA	False	NA	NA	NA	22204109	22204781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22204100_22204800
WTC11_00036235	chr17	+	4211	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	-24	0	-7	0	multi-exon	FALSE	canonical	3	319	junction_5	107.142136902341	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281812	True	NA	38	True	ATTAAA	-20	NA	27294068	27313631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
WTC11_00036236	chr17	+	707	2	FSM	ENSG00000109046.15	ENST00000581089.1	697	2	-10	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAGGTGCGTCTTTATAA	27281855	True	NA	NA	False	NA	NA	NA	27294111	27303749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27303366
WTC11_00036237	chr17	+	1911	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	-11	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	20.5243757517738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	27281846	True	NA	NA	False	NA	NA	NA	27294102	27307789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
WTC11_00036238	chr17	+	552	3	FSM	ENSG00000109046.15	ENST00000583193.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	158.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAAGTAACCTTGCATT	27281855	True	NA	NA	False	NA	NA	NA	27294111	27307870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27306781_27306883_27307743
WTC11_00036239	chr17	+	5116	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	-11	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	145.232518311155	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	27281846	True	NA	9	True	AATAAA	-15	NA	27294102	27315926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
WTC11_00036240	chr17	+	7366	19	NIC	ENSG00000141068.15	novel	6026	21	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	11.3382342344633	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGGCTTGTCTTTGCT	27454310	True	NA	7	True	AATAAA	-15	NA	27456406	27626435	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_27456875_27550567_27550709_27577491_27577640_27582645_27583106_27588474_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27621928
WTC11_00036241	chr17	+	5855	19	NIC	ENSG00000141068.15	novel	6026	21	NA	NA	-16	-100	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	12.8688781442423	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTATCGGGTTTT	27454335	True	NA	87	True	ATTAAA	-17	NA	27456431	27626334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_27456875_27550567_27550709_27577491_27577640_27582645_27583106_27588474_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27623313
WTC11_00036246	chr17	+	4482	11	FSM	ENSG00000087095.13	ENST00000407008.8	3526	11	-956	0	-16	0	multi-exon	FALSE	canonical	3	103	junction_5	20.6690590013189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCATCTGTTTTATT	28039368	True	NA	22	True	ATTAAA	-17	NA	28041720	28196381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28043332_28122602_28122733_28132619_28132676_28161159_28161267_28163542_28163629_28168447_28168658_28172516_28172619_28185178_28185266_28191020_28191220_28192119_28192214_28194581
WTC11_00036247	chr17	+	2639	2	FSM	ENSG00000087095.13	ENST00000582037.2	1503	2	-1136	0	-34	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTCTCTTTGGGTTT	28039350	True	NA	18	True	AATAAA	-29	NA	28041702	28048926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28043332_28047916
WTC11_00036248	chr17	+	968	2	FSM	ENSG00000237575.4	ENST00000441253.2	1076	2	103	5	103	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAATGTGTGCCTTTGTAT	NA	False	NA	10	True	AATAAA	-19	NA	28226665	28228060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28226879_28227305
WTC11_00036249	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	855	junction_2	5.5	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	28303163	True	NA	20	True	AATAAA	-17	NA	28319199	28328685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28319366_28325502_28325648_28326533
WTC11_00036250	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	9.46337971105226	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	28334560	True	NA	6	True	AATAAA	-17	NA	28335760	28347009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
WTC11_00036251	chr17	+	1116	6	NNC	ENSG00000244045.13	novel	3082	6	NA	NA	0	780	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	85.7242089493977	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCAGTGGACACTTCCTC	28354786	True	NA	0	True	CATAAA	-14	NA	28357646	28362235	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361674
WTC11_00036252	chr17	+	3093	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	-11	0	-6	0	multi-exon	FALSE	canonical	3	216	junction_1	9.54148835350125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	28354775	True	NA	19	True	ATTAAA	-16	NA	28357635	28363683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
WTC11_00036253	chr17	+	10277	9	FSM	ENSG00000004139.14	ENST00000585482.6	10277	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3.70809924354783	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCATTTACTGGCCTG	28371490	True	NA	NA	False	AATAAA	-17	NA	28371693	28404049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28372503_28381202_28381822_28384356_28384570_28384838_28384931_28385039_28385276_28388173_28388277_28388349_28388540_28395904_28396027_28396156
WTC11_00036254	chr17	+	1113	3	FSM	ENSG00000004139.14	ENST00000579593.1	1113	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACTCAGTGCCCTT	28388231	False	NA	NA	False	NA	NA	NA	28388269	28396820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28388277_28388349_28388540_28395904
WTC11_00036255	chr17	+	683	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	-46	-52	-46	52	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTGTTGAGGCTGTGA	NA	False	NA	NA	False	AATAAA	-34	NA	28467775	28468458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28467800_28468500
WTC11_00036256	chr17	+	5569	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	81.2671918093192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	28654474	True	NA	17	True	CATAAA	-17	NA	28662197	28701735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
WTC11_00036257	chr17	+	6411	37	FSM	ENSG00000109111.15	ENST00000314616.11	6404	37	-7	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	46.5747772570434	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCCTCTGCCGTTCAT	28654474	True	NA	21	True	AGTAAA	-15	NA	28662197	28702679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
WTC11_00036261	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	12081	junction_1	1995.56464440519	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	28532132	True	NA	29	True	AATAAA	-23	NA	28719984	28724359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
WTC11_00036262	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	6575.6783442851	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720048	False	NA	36	True	AATATA	-26	NA	28720078	28723936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
WTC11_00036263	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	6563.85756910523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720217	False	NA	36	True	AATATA	-26	NA	28720243	28723936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
WTC11_00036264	chr17	+	587	5	FSM	ENSG00000198242.14	ENST00000355731.8	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6742.12786792864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGGGCTTGGGCAAGA	28719832	False	NA	-63	True	NA	NA	NA	28720298	28723992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720329_28720706_28720891_28722722_28722900_28723570_28723641_28723866
WTC11_00036265	chr17	+	412	2	FSM	ENSG00000198242.14	ENST00000580755.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	12918	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGTCTGTCAATTT	28723289	False	NA	37	True	AATATA	-27	NA	28723299	28723937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28723641_28723866
WTC11_00036266	chr17	+	3752	15	NNC	ENSG00000160602.14	novel	782	5	NA	NA	-783	0	intron_retention	FALSE	canonical	1	4	junction_5	15.7410486386676	440	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28726949	True	NA	12	True	AATAAA	-14	NA	28728004	28743455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28728257_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
WTC11_00036270	chr17	+	2917	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	-23	0	-23	0	multi-exon	FALSE	canonical	3	309	junction_4	19.5994614438481	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	28737457	True	NA	15	True	ATTAAA	-15	NA	28743987	28750956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
WTC11_00036271	chr17	+	788	5	FSM	ENSG00000076604.16	ENST00000469529.6	788	5	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	23.1449238495183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCAGGAGCTTCGGCG	28747694	False	NA	NA	False	NA	NA	NA	28747729	28749034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
WTC11_00036272	chr17	+	600	5	FSM	ENSG00000132591.12	ENST00000578001.1	579	5	-21	0	-2	0	multi-exon	FALSE	canonical	2	16	junction_3	283.600952043536	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGTGGACACGGAACC	28843636	True	NA	NA	False	NA	NA	NA	28855007	28858395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28858145_28858208_28858373
WTC11_00036273	chr17	+	1040	7	FSM	ENSG00000132591.12	ENST00000412138.6	1039	7	-1	0	-1	0	multi-exon	FALSE	canonical	2	8	junction_3	246.195495942193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCATGTTGTCAGCCC	28843637	True	NA	NA	False	NA	NA	NA	28855008	28858775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28855318_28856263_28856392_28856504_28856686_28857938_28857986_28858145_28858208_28858373_28858487_28858575
WTC11_00036274	chr17	+	1849	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	-8	0	-2	0	multi-exon	TRUE	canonical	3	576	junction_9	44.8151209049847	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843636	True	NA	21	True	AATAAA	-22	NA	28855007	28861061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
WTC11_00036276	chr17	+	2321	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	-152	0	-152	0	multi-exon	FALSE	canonical	3	160	junction_7	8.97388501402252	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	29040787	True	NA	19	True	AATAAA	-33	NA	29042988	29057216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
WTC11_00036277	chr17	+	526	5	FSM	ENSG00000160551.12	ENST00000583121.5	526	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.24037034920393	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAGAATAAAACATCCC	29390436	False	NA	NA	False	NA	NA	NA	29390463	29475703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29390589_29390955_29391025_29451454_29451681_29467144_29467217_29475669
WTC11_00036278	chr17	+	353	2	FSM	ENSG00000160551.12	ENST00000587277.1	353	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAATTTACTTAATGTC	29390896	False	NA	NA	False	NA	NA	NA	29390924	29451707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29391025_29451454
WTC11_00036279	chr17	+	11326	13	ISM	ENSG00000160551.12	ENST00000261716.8	12643	20	91833	-1	2125	1	3prime_fragment	FALSE	canonical	3	9	junction_1	4.74561200830128	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCCAGTTTTTTTAA	29482177	False	NA	10	True	AATAAA	-18	NA	29482195	29551904	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_29482289_29489663_29489758_29491783_29491866_29495559_29495728_29498317_29498522_29502588_29502724_29507895_29508133_29510863_29510993_29517452_29517657_29522279_29522520_29530406_29530620_29534117_29534301_29542560
WTC11_00036280	chr17	+	664	6	FSM	ENSG00000167543.16	ENST00000577934.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	197.810616499722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGCTTGAAGGCCAAG	29568339	False	NA	NA	False	NA	NA	NA	29568516	29572307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29568549_29569017_29569087_29569317_29569360_29571590_29571720_29571831_29572058_29572141
WTC11_00036281	chr17	+	1473	7	FSM	ENSG00000167543.16	ENST00000301057.8	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	33.4153158496719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	29566378	True	NA	24	True	ATTAAA	-15	NA	29568700	29573157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141_29572698_29572811
WTC11_00036285	chr17	+	3570	15	FSM	ENSG00000198720.13	ENST00000394859.8	3550	15	-21	1	-21	0	multi-exon	FALSE	canonical	3	21	junction_4	11.9328478219936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTGCTACCTAACTT	29592007	True	NA	9	True	AATAAA	-17	NA	29593110	29614760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29593736_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609085_29609276_29609354_29609422_29610684_29610767_29611578_29611644_29611875_29612007_29612115_29612274_29612401_29612555_29612651_29612816_29612886_29612964_29613353
WTC11_00036287	chr17	+	452	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	30	0	-30	multi-exon	FALSE	canonical	2	8	junction_2	101.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTGAACTTAGTATGT	30109810	True	NA	NA	False	NA	NA	NA	30116780	30128133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30118079_30118174_30127858
WTC11_00036288	chr17	+	532	4	FSM	ENSG00000126653.18	ENST00000479218.6	540	4	-20	28	0	-28	multi-exon	FALSE	canonical	2	8	junction_3	23.8094285712381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGCCATAGTATATTCC	30109836	True	NA	NA	False	TATAAA	-21	NA	30116806	30128208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30127858
WTC11_00036290	chr17	+	2545	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	-22	-1281	0	0	multi-exon	FALSE	canonical	3	58	junction_1	162.220686166741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	30109836	True	NA	14	True	AATAAA	-21	NA	30116806	30186474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
WTC11_00036291	chr17	+	2530	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	-24	0	11	0	multi-exon	FALSE	canonical	3	211	junction_1	83.9809832971462	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	30109821	True	NA	15	True	AATAAA	-22	NA	30116791	30186475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
WTC11_00036297	chr17	+	9550	21	FSM	ENSG00000108582.12	ENST00000225719.9	9372	21	-11	-167	-11	167	multi-exon	TRUE	canonical	3	170	junction_6	29.2651670078952	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACCTTTCTCTCTCTCT	30374892	True	NA	NA	False	AATAAA	-20	NA	30378915	30470156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30379727_30384988_30385237_30420840_30420984_30421663_30421834_30422673_30423024_30423505_30423698_30427390_30427559_30431771_30431882_30438974_30439078_30442307_30442451_30443801_30443972_30445690_30446021_30449552_30449749_30451710_30451847_30455338_30455471_30456255_30456352_30456461_30456527_30461179_30461312_30461876_30462063_30462369_30462470_30464587
WTC11_00036298	chr17	+	415	2	FSM	ENSG00000108582.12	ENST00000583275.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTATTCTGAGCAAAAAAG	30379602	False	NA	NA	False	NA	NA	NA	30379615	30385292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30379727_30384988
WTC11_00036299	chr17	+	541	6	FSM	ENSG00000108582.12	ENST00000584051.1	575	6	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_1	95.01452520536	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGGGCAGACAATAAGAG	30450259	False	NA	NA	False	NA	NA	NA	30450269	30461266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30450295_30451710_30451847_30455338_30455471_30456255_30456352_30456461_30456527_30461179
WTC11_00036300	chr17	+	479	2	FSM	ENSG00000108582.12	ENST00000580396.1	2733	2	2235	19	2235	-19	multi-exon	FALSE	canonical	3	214	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	30456243	False	NA	NA	False	NA	NA	NA	30456255	30456844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30456352_30456461
WTC11_00036301	chr17	+	6760	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	8	-729	8	729	multi-exon	TRUE	canonical	3	243	junction_2	84.6329390662997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGTGACTTGTCGTT	30468622	True	NA	NA	False	AATAAA	-21	NA	30477369	30528321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
WTC11_00036302	chr17	+	696	4	FSM	ENSG00000108587.16	ENST00000491489.6	723	4	-15	42	0	-42	multi-exon	FALSE	canonical	3	243	junction_2	133.389154981455	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTAAGCGTGTACTTTCA	30468660	True	NA	NA	False	NA	NA	NA	30477407	30485092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662
WTC11_00036303	chr17	+	6716	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	-729	0	729	multi-exon	FALSE	canonical	3	328	junction_2	62.1691241694782	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGTGACTTGTCGTT	30468660	True	NA	NA	False	AATAAA	-21	NA	30477407	30528321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
WTC11_00036304	chr17	+	4924	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	-514	-3137	-514	1997	multi-exon	FALSE	canonical	3	30	junction_5	24.415955621046	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	30600352	False	NA	91	True	AATAAA	-19	NA	30600377	30637463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
WTC11_00036305	chr17	+	5475	6	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-514	1997	intron_retention	FALSE	canonical	3	20	junction_5	26.6052626373054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	30600352	False	NA	91	True	AATAAA	-19	NA	30600377	30637463	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631928_30633097
WTC11_00036306	chr17	+	1221	7	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-168	28	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	31.6530672552703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACATTCTTCTTCTGT	30599988	True	NA	NA	False	NA	NA	NA	30600723	30634190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631896_30633097_30633391_30633993
WTC11_00036307	chr17	+	6062	6	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-531	2000	intron_retention	FALSE	canonical	3	60	junction_1	14.2772546380598	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGTAATAAATTGGT	NA	False	NA	94	True	AATAAA	-22	NA	30600360	30637466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30633391_30633993
WTC11_00036309	chr17	+	929	6	FSM	ENSG00000264538.7	ENST00000578070.5	929	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	139.162351230496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATATTGATTATTTC	30709288	False	NA	1	True	AATATA	-2	NA	30709298	30770034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30709812_30743300_30743370_30766502_30766589_30768833_30768868_30769000_30769065_30769871
WTC11_00036310	chr17	+	563	7	FSM	ENSG00000264538.7	ENST00000579526.5	563	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	117.464060697541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCCTTTGAATCCTGAC	30709596	False	NA	NA	False	AAAAAG	-2	NA	30709607	30768876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30709812_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833
WTC11_00036311	chr17	+	3036	8	Fusion	ENSG00000266490.1_ENSG00000264538.7	novel	563	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	28	junction_7	132.827185562632	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTTGAACTTATTCC	30709596	False	NA	19	True	AATAAA	-16	NA	30709607	30792830	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_30709812_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871_30769966_30784782_30784893_30790637
WTC11_00036313	chr17	+	1560	7	FSM	ENSG00000264538.7	ENST00000582557.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	101.1853360039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30734048	False	NA	17	True	AATATA	-18	NA	30734062	30770050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
WTC11_00036314	chr17	+	1969	1	FSM	ENSG00000280069.1	ENST00000623719.1	2094	1	33	92	33	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTGCATGGGTAGAG	30738200	False	NA	NA	False	NA	NA	NA	30738214	30740183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30738200_30740200
WTC11_00036315	chr17	+	441	1	FSM	ENSG00000276250.1	ENST00000621598.1	424	1	-17	0	-17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTGTCTGTGATGCA	NA	False	NA	NA	False	ATTAAA	-15	NA	30803636	30804077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30803600_30804100
WTC11_00036316	chr17	+	6873	23	FSM	ENSG00000176208.9	ENST00000321990.5	6873	23	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	18.8134051908748	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGATGTAATCATCT	30828886	True	NA	NA	False	ATTAAA	-37	NA	30831965	30895869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495_30869647_30876373_30876551_30877415_30877550_30878002_30878097_30879422_30879488_30887191_30887373_30892606_30892789_30893293_30894151_30894563_30894723_30894834
WTC11_00036317	chr17	+	2686	13	FSM	ENSG00000176208.9	ENST00000585133.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_8	15.9808913671575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGACTTTTAAAAAAGCA	30835196	False	NA	NA	False	NA	NA	NA	30835208	30869852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495
WTC11_00036318	chr17	+	337	2	FSM	ENSG00000184060.11	ENST00000480980.1	804	2	238	229	224	57	multi-exon	FALSE	canonical	3	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGGGCAGAGGACAG	NA	False	NA	NA	False	NA	NA	NA	30954477	30956499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30954556_30956240
WTC11_00036319	chr17	+	2293	5	FSM	ENSG00000181481.14	ENST00000328381.10	2054	5	-241	2	-186	0	multi-exon	FALSE	canonical	3	55	junction_3	13.8270568090248	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGAGTTCTGTGA	30970722	False	NA	19	True	AATAAA	-19	NA	30970797	30999909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30997241_30997332_30998661
WTC11_00036322	chr17	+	938	1	FSM	ENSG00000264456.1	ENST00000580979.1	1661	1	601	122	601	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	2518	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAATTGGGTTGTTT	30972241	False	NA	NA	False	NA	NA	NA	30972252	30973190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30972300_30973200
WTC11_00036323	chr17	+	571	2	FSM	ENSG00000266865.7	ENST00000579692.1	739	2	0	168	0	-168	multi-exon	FALSE	canonical	2	8	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTATTCTCAAATATAT	31008483	False	NA	NA	False	NA	NA	NA	31008496	31022173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31008804_31021909
WTC11_00036324	chr17	+	477	4	FSM	ENSG00000266865.7	ENST00000578883.1	477	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTATTTTTATTATTGTT	31024315	False	NA	NA	False	ATTAAA	-14	NA	31024340	31034162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31024427_31032425_31032507_31033294_31033366_31033923
WTC11_00036325	chr17	+	246	1	ISM	ENSG00000266865.7	ENST00000687724.1	2343	6	25697	1133	9935	230	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCATTCCATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	31034275	31034521	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_31034300_31034500
WTC11_00036326	chr17	+	2021	14	FSM	ENSG00000196712.19	ENST00000487476.5	2265	14	50	194	0	-194	multi-exon	FALSE	canonical	2	3	junction_4	5.16130344529731	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATTCATGATGTTCCT	31094465	True	NA	NA	False	AATGAA	-32	NA	31094976	31219165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004
WTC11_00036327	chr17	+	2746	15	FSM	ENSG00000196712.19	ENST00000431387.8	2889	15	0	143	0	-143	multi-exon	FALSE	canonical	2	3	junction_4	4.99438460183238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTAAAAAGAAGCAGGTA	31094465	True	NA	NA	False	AATATA	-45	NA	31094976	31222621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849
WTC11_00036328	chr17	+	2672	15	ISM	ENSG00000196712.19	ENST00000456735.6	7787	50	32237	37985	-257	-25	internal_fragment	TRUE	canonical	2	5	junction_5	4.08144132204619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAATTGGTTTCAA	31232753	False	NA	NA	False	AATAAA	-43	NA	31232772	31336448	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_31232882_31233001_31233214_31235610_31235773_31235917_31236022_31248983_31249120_31258343_31258503_31259031_31259130_31260368_31260516_31261710_31261858_31265228_31265340_31325819_31326253_31327498_31327840_31330295_31330499_31334837_31335032_31336332
WTC11_00036329	chr17	+	682	4	ISM	ENSG00000196712.19	ENST00000684826.1	7344	24	18018	39503	733	1276	internal_fragment	FALSE	canonical	3	14	junction_3	5.09901951359278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTCACTTCTCCCAAAT	NA	False	NA	NA	False	GATAAA	-36	NA	31336634	31338149	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_31336915_31337367_31337583_31337818_31337881_31338024
WTC11_00036330	chr17	+	510	5	FSM	ENSG00000196712.19	ENST00000584328.1	566	5	56	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	0.866025403784439	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTAACTTTGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	31337818	31343098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31337881_31338024_31338140_31338703_31338806_31340504_31340646_31343008
WTC11_00036331	chr17	+	918	1	FSM	ENSG00000263535.2	ENST00000581275.2	672	1	-203	-43	-203	43	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTGTAGTATTGGT	31343618	True	NA	NA	False	NA	NA	NA	31345315	31346233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31345300_31346200
WTC11_00036332	chr17	+	4033	4	ISM	ENSG00000196712.19	ENST00000471572.6	2028	17	20731	4181	0	19	internal_fragment	TRUE	canonical	3	18	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGAGCTCTGTTTTCTTC	31358536	False	NA	68	True	NA	NA	NA	31358547	31377706	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_31358623_31358968_31359016_31360486_31360704_31374012
WTC11_00036333	chr17	+	8582	15	FSM	ENSG00000131242.18	ENST00000621161.5	8571	15	-11	0	-11	0	multi-exon	FALSE	canonical	2	15	junction_1	59.3424857268795	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGACTGAACCATGAGTT	31391337	True	NA	11	True	AATAAA	-16	NA	31391663	31538211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31392012_31431812_31431901_31434033_31434123_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
WTC11_00036335	chr17	+	8398	13	FSM	ENSG00000284424.1_ENSG00000131242.18	ENST00000394744.6	1968	13	-68	-6362	-68	0	multi-exon	FALSE	canonical	3	129	junction_3	20.6599451435219	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGACTGAACCATGAGTT	NA	False	NA	11	True	AATAAA	-16	NA	31487931	31538211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
WTC11_00036336	chr17	+	4509	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	-14	0	-14	0	multi-exon	FALSE	canonical	3	244	junction_6	31.5845250434801	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	31931763	True	NA	13	True	TATAAA	-6	NA	31936992	32001038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
WTC11_00036338	chr17	+	1315	3	FSM	ENSG00000185158.12	ENST00000579206.5	733	3	-582	0	-480	0	multi-exon	FALSE	canonical	3	16	junction_1	8.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAACTCCGGGTGAACG	32006710	True	NA	NA	False	NA	NA	NA	32007391	32021859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32008133_32020696_32020804_32021392
WTC11_00036339	chr17	+	3614	15	FSM	ENSG00000185158.12	ENST00000543378.6	3091	15	-596	73	-480	0	multi-exon	FALSE	canonical	3	12	junction_2	23.7366503835013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTACTTTGTGGTTG	32006710	True	NA	18	True	ATTAAA	-30	NA	32007391	32053413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32008133_32017971_32018055_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
WTC11_00036340	chr17	+	756	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	-363	0	-199	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	32007662	False	NA	2	True	AATAAA	-14	NA	32007672	32017220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32008133_32016924
WTC11_00036345	chr17	+	721	1	FSM	ENSG00000266777.1	ENST00000582640.1	721	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGAGCGAGTGCCT	NA	False	NA	NA	False	NA	NA	NA	32039973	32040694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32040000_32040700
WTC11_00036346	chr17	+	1088	1	FSM	ENSG00000266777.1	ENST00000583601.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCACTGGTGCCCCCGC	NA	False	NA	NA	False	NA	NA	NA	32040436	32041524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32040400_32041500
WTC11_00036352	chr17	+	3809	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	-109	-3269	-109	3193	multi-exon	FALSE	canonical	3	74	junction_2	13.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGGGTCATTGAGC	32082715	True	NA	6	True	AGTAAA	-15	NA	32083069	32100258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32083323_32095061_32095202_32096842
WTC11_00036353	chr17	+	222	1	FSM	ENSG00000264164.1	ENST00000584248.1	222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGAGGGGCATTTTCTC	NA	False	NA	-81	True	NA	NA	NA	32096843	32097065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32096800_32097100
WTC11_00036354	chr17	+	928	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	-69	1	-69	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGACTCATTTATTTA	32127512	False	NA	NA	False	ATTAAA	-15	NA	32127525	32128453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32127500_32128500
WTC11_00036355	chr17	+	2960	21	NIC	ENSG00000126858.19	novel	3297	21	NA	NA	12	-21	combination_of_known_junctions	TRUE	canonical	3	12	junction_18	77.6285385666895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCCTTACTACTGTTGA	32139656	True	NA	4	True	AATAAA	-44	NA	32142486	32225482	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32207511_32207564_32208106_32208310_32209349_32209446_32224615
WTC11_00036356	chr17	+	3180	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	-15	0	12	0	multi-exon	FALSE	canonical	3	49	junction_18	55.4373195500285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139656	True	NA	10	True	AATAAA	-20	NA	32142486	32225727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
WTC11_00036357	chr17	+	3309	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	-12	0	0	0	multi-exon	FALSE	canonical	3	20	junction_19	65.541494490132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139623	True	NA	10	True	AATAAA	-20	NA	32142453	32225727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
WTC11_00036362	chr17	+	2967	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	-7	0	0	0	multi-exon	FALSE	canonical	3	47	junction_19	53.0256823783509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32142661	False	NA	10	True	AATAAA	-20	NA	32142672	32225727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
WTC11_00036365	chr17	+	4978	8	FSM	ENSG00000141314.13_ENSG00000265794.5	ENST00000538145.5	1338	8	-343	-3297	2	1	multi-exon	FALSE	canonical	0	0	junction_3	24.6601388678083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGGTTATTCAGGAAGT	32265388	True	NA	12	True	ATTAAA	-22	NA	32265833	32324660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32266301_32284658_32284818_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
WTC11_00036366	chr17	+	4768	7	Fusion	ENSG00000141314.13_ENSG00000265794.5	novel	1338	8	NA	NA	2	1	multi-exon	FALSE	canonical	0	0	junction_2	25.9208196029541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGGTTATTCAGGAAGT	32265388	True	NA	12	True	ATTAAA	-22	NA	32265833	32324660	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_32266301_32288791_32289017_32294344_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
WTC11_00036367	chr17	+	1180	6	FSM	ENSG00000141314.13	ENST00000582967.1	1246	6	66	0	66	0	multi-exon	FALSE	canonical	0	0	junction_2	26.1044057584156	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCCTTATCTGTAGT	NA	False	NA	NA	False	NA	NA	NA	32284217	32316274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32284818_32288791_32289017_32294344_32294443_32298091_32298205_32305340_32305442_32316231
WTC11_00036369	chr17	+	2290	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	30	junction_5	387.420043363789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	32329798	True	NA	12	True	AATAAA	-22	NA	32350124	32370451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
WTC11_00036370	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	256.136262805498	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	32329830	True	NA	6	True	AATAAA	-20	NA	32350156	32381885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
WTC11_00036378	chr17	+	3856	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	-6	0	0	0	multi-exon	FALSE	canonical	3	2004	junction_13	131.193068802339	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	32411330	True	NA	NA	False	AATAAA	-19	NA	32444503	32483319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
WTC11_00036382	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	81.8617550433382	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	32922666	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
WTC11_00036386	chr17	+	755	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	-20	6	-20	-6	multi-exon	FALSE	canonical	3	54	junction_2	4	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCTGACTTCCAGTG	34254746	True	NA	NA	False	AATAAA	-12	NA	34255264	34257197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_34255426_34256221_34256340_34256721
WTC11_00036392	chr17	+	10034	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	-6979	0	408	multi-exon	FALSE	canonical	3	30	junction_19	74.4031095766934	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAATGTAATAAGTCCC	34973514	True	NA	NA	False	CATAAA	-8	NA	34980545	35010151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
WTC11_00036400	chr17	+	1410	2	FSM	ENSG00000267321.4	ENST00000659685.1	1410	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTTCATAGAAACTTTA	35565173	True	NA	NA	False	NA	NA	NA	35568115	35574900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35568502_35573876
WTC11_00036403	chr17	+	5717	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	-17	0	-9	0	multi-exon	TRUE	canonical	2	74	junction_14	66.82409982529	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	35580304	True	NA	NA	False	AATAAA	-18	NA	35587304	35726413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
WTC11_00036404	chr17	+	2285	15	FSM	ENSG00000006125.18	ENST00000614600.4	2285	15	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_1	78.2089039244332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCATCTGTTTTTT	35580366	True	NA	NA	False	NA	NA	NA	35587366	35670898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856
WTC11_00036406	chr17	+	5745	21	NIC	ENSG00000006125.18	novel	3483	22	NA	NA	22	4	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	66.2816716747549	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGGTATGTATTTTTT	35580473	False	NA	NA	False	AATAAA	-22	NA	35587473	35726417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587664_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
WTC11_00036407	chr17	+	3497	22	NIC	ENSG00000006125.18	novel	3415	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_1	79.1799237020365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	35580366	True	NA	14	True	ATTAAA	-20	NA	35587366	35724086	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
WTC11_00036413	chr17	+	1310	8	NNC	ENSG00000261499.2	novel	1168	11	NA	NA	8	-4768	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	74.2406456692542	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAATAAAAGTAAACAA	NA	False	NA	NA	False	NA	NA	NA	36274198	36315779	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36274284_36297308_36297387_36307296_36307419_36310674_36310783_36313436_36313638_36314083_36314181_36314308_36314343_36315194
WTC11_00036415	chr17	+	1041	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	-40	-75	-40	75	multi-exon	FALSE	canonical	3	86	junction_1	252.248995152717	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTTTTCTTCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	36486588	36495898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
WTC11_00036416	chr17	+	908	5	FSM	ENSG00000273611.5	ENST00000617429.5	905	5	-3	0	0	0	multi-exon	FALSE	canonical	3	554	junction_2	28.9601018644617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	36482020	True	NA	79	True	AATAAA	-21	NA	36486677	36495822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36495222
WTC11_00036418	chr17	+	2835	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	147	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	NA	False	NA	32	True	AATAAA	-39	NA	36534967	36539303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36535593_36537093
WTC11_00036419	chr17	+	2245	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	-1369	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	36534438	True	NA	32	True	AATAAA	-39	NA	36535019	36539303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36535055_36537093
WTC11_00036420	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	36535355	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36535602_36537093
WTC11_00036422	chr17	+	2565	8	FSM	ENSG00000278311.5	ENST00000617860.4	3497	8	-7	939	0	-939	multi-exon	TRUE	canonical	3	84	junction_1	62.013165159192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATTTCTTAATATCAA	36544712	False	NA	NA	False	NA	NA	NA	36544911	36581538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36579420_36581343
WTC11_00036423	chr17	+	2366	10	FSM	ENSG00000278311.5	ENST00000618837.4	2346	10	-20	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	65.8006716915696	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAAAGCAAGA	36544712	False	NA	NA	False	AATAAA	-3	NA	36544911	36586158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299
WTC11_00036424	chr17	+	2809	14	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	59.709057919491	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	36544732	False	NA	NA	False	AATAAA	-28	NA	36544931	36589848	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
WTC11_00036427	chr17	+	764	5	FSM	ENSG00000278535.5	ENST00000612538.1	756	5	-8	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	135.945761243225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGGTGAAGCCACTG	36591857	False	NA	NA	False	AATGAA	-16	NA	36591878	36599777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36592157_36595026_36595181_36598162_36598258_36598920_36599051_36599670
WTC11_00036428	chr17	+	1301	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	142.13317698553	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGCCTTGGCTTCAG	36591857	False	NA	13	True	ATTAAA	-16	NA	36591878	36600800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_36592157_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
WTC11_00036433	chr17	+	3732	5	ISM	ENSG00000278535.5	ENST00000611337.4	1341	7	3528	48	823	0	3prime_fragment	FALSE	canonical	3	350	junction_2	32.1169737055034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTGGATTTCATGGTG	36595387	False	NA	-31	True	NA	NA	NA	36595409	36600756	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
WTC11_00036434	chr17	+	4505	1	FSM	ENSG00000278535.5	ENST00000610443.1	4505	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCCTTGGCTTCAGGA	36596275	False	NA	15	True	ATTAAA	-18	NA	36596297	36600802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36596300_36600800
WTC11_00036438	chr17	+	1133	1	FSM	ENSG00000275720.1	ENST00000618067.1	630	1	-561	58	-561	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGAGGTGTCTAATTT	NA	False	NA	-54	True	NA	NA	NA	36633507	36634640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36633500_36634600
WTC11_00036447	chr17	+	731	1	FSM	ENSG00000276810.1	ENST00000620102.1	524	1	-178	-29	-178	29	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTAACTCAAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	37162437	37163168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37162400_37163200
WTC11_00036459	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	47.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	37489840	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37489959_37510676_37510765_37512180
WTC11_00036462	chr17	+	1564	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	722	junction_4	38.1115441292841	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	38297130	True	NA	12	True	TATAAA	-18	NA	38297156	38323211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
WTC11_00036463	chr17	+	8114	9	FSM	ENSG00000274211.6	ENST00000613678.5	1827	9	-344	-5943	40	-2	multi-exon	FALSE	canonical	3	12	junction_3	5.15842757049084	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATGTTCTTTGGTTT	NA	False	NA	12	True	AATAAA	-14	NA	38351883	38405591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38353033_38361710_38361776_38364751_38364857_38366286_38366418_38367881_38368051_38377713_38377843_38395308_38395445_38395847_38395999_38399512
WTC11_00036464	chr17	+	480	5	FSM	ENSG00000274211.6	ENST00000617765.1	480	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.280442597476	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGAGGACCGCTGTC	NA	False	NA	NA	False	NA	NA	NA	38352942	38377738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38353033_38361710_38361776_38366286_38366418_38367881_38368051_38377713
WTC11_00036467	chr17	+	6308	24	NIC	ENSG00000275832.5	novel	769	8	NA	NA	-31	0	intron_retention	TRUE	canonical	3	44	junction_13	25.2264601384204	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	NA	False	NA	28	True	AATAAA	-14	NA	38453658	38512385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
WTC11_00036474	chr17	+	5529	8	FSM	ENSG00000275023.5	ENST00000619356.1	3868	8	932	-2593	932	-10	multi-exon	FALSE	canonical	2	6	junction_3	3.77424137532083	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCGAAGAGC	38719496	True	NA	NA	False	AATAAA	-20	NA	38719514	38729785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38719584_38719749_38719896_38720371_38720570_38720658_38720748_38721877_38722228_38722677_38722769_38724619_38724977_38725556
WTC11_00036478	chr17	+	862	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	-201	1	-178	-1	multi-exon	FALSE	canonical	2	12	junction_3	1140.99791410852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCTTTTGTCTTTGA	NA	False	NA	26	True	AATAAA	-15	NA	38752562	38764224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
WTC11_00036479	chr17	+	768	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	2579	junction_5	148.776879924268	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCTTTTGTCTTTGA	38724823	True	NA	26	True	AATAAA	-15	NA	38752733	38764224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
WTC11_00036480	chr17	+	598	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	-46	0	-14	0	multi-exon	FALSE	canonical	3	179	junction_3	1167.35373816166	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724816	True	NA	27	True	AATAAA	-16	NA	38752726	38764225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
WTC11_00036482	chr17	+	4545	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	-635	0	-436	0	multi-exon	FALSE	canonical	3	449	junction_6	23.6008474424119	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	38869407	False	NA	33	True	AATAAA	-22	NA	38869422	38921770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
WTC11_00036486	chr17	+	3482	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	206	4	206	-4	multi-exon	FALSE	canonical	2	17	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACTCTGAAGAATTATAA	38925360	False	NA	NA	False	AATAAA	-18	NA	38925373	38929380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38925892_38926416
WTC11_00036488	chr17	+	737	6	FSM	ENSG00000108298.12	ENST00000225430.9	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	10414	junction_1	2144.15680396747	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCTTGCAAGGTT	39051117	True	NA	36	True	AATAAA	-22	NA	39200282	39204732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200350_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
WTC11_00036489	chr17	+	690	6	FSM	ENSG00000108298.12	ENST00000579374.5	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	5921.76214990099	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	39051150	True	NA	31	True	AATAAA	-17	NA	39200315	39204727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200350_39201221_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
WTC11_00036490	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1265	junction_1	5674.85391530037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	39051176	True	NA	15	True	AATAAA	-1	NA	39200341	39204711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
WTC11_00036491	chr17	+	795	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	-3	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6160.2156001231	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	39051176	True	NA	24	True	AATAAA	-10	NA	39200341	39204720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
WTC11_00036492	chr17	+	2970	3	FSM	ENSG00000108298.12	ENST00000678791.1	2970	3	0	0	0	0	multi-exon	FALSE	canonical	3	13753	junction_2	717.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAAGCCTTAATCTGC	39200420	False	NA	11	True	ATTAAA	-2	NA	39200433	39204707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39203110_39204076_39204188_39204524
WTC11_00036493	chr17	+	1512	5	FSM	ENSG00000108298.12	ENST00000678573.1	1330	5	-165	-17	0	0	multi-exon	FALSE	canonical	3	13753	junction_4	1016.14738104273	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAACAAGCCTTAAT	39051176	True	NA	7	True	NA	NA	NA	39200341	39204703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
WTC11_00036499	chr17	+	770	1	FSM	ENSG00000273576.1	ENST00000615852.1	645	1	-127	2	-127	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGGCCTAAACTCCC	39566776	False	NA	6	True	AATAAA	-14	NA	39566787	39567557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39566800_39567600
WTC11_00036500	chr17	+	1529	8	FSM	ENSG00000131771.14	ENST00000580825.5	1038	8	131	-622	-81	0	multi-exon	FALSE	canonical	3	18	junction_1	23.5293997599009	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	39626860	False	NA	12	True	AATAAA	-12	NA	39626870	39636622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39626941_39627305_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
WTC11_00036501	chr17	+	1896	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	-81	0	-81	0	multi-exon	FALSE	canonical	3	79	junction_1	4.52462398683274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	39626860	False	NA	14	True	AATAAA	-14	NA	39626870	39636624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
WTC11_00036503	chr17	+	1519	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	-17	2	-17	0	multi-exon	FALSE	canonical	3	11	junction_1	27.92499875659	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	39628358	True	NA	14	True	AATAAA	-14	NA	39628480	39636624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
WTC11_00036510	chr17	+	2755	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	44	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	111.765356430153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGACAGTGCTCAGTAAT	39632013	True	NA	8	True	ATTAAA	-14	NA	39637205	39664197	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660159_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
WTC11_00036511	chr17	+	3400	6	FSM	ENSG00000131748.16	ENST00000481171.5	3451	6	51	0	51	0	multi-exon	FALSE	canonical	3	409	junction_5	24.0698982133286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39657923	False	NA	37	True	ATTAAA	-27	NA	39657961	39663484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39658821_39659050_39659107_39659460_39660527_39660809_39660890_39660980_39661086_39662250
WTC11_00036518	chr17	+	2528	18	FSM	ENSG00000141736.14	ENST00000578199.5	2526	18	-18	16	0	-14	multi-exon	TRUE	canonical	3	15	junction_3	324.405316985683	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATGCCCTAGCAGTTC	39687712	True	NA	2	True	ATTAAA	-13	NA	39688100	39717641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694987_39695182_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319
WTC11_00036519	chr17	+	4507	27	FSM	ENSG00000141736.14	ENST00000406381.6	4564	27	57	0	57	0	multi-exon	FALSE	canonical	3	55	junction_1	177.294847690934	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACCGGCCTATGTCTGGG	39694599	False	NA	29	True	AATATA	-17	NA	39694987	39728662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39695182_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
WTC11_00036521	chr17	+	4557	27	FSM	ENSG00000141736.14	ENST00000269571.10	4557	27	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	89.3176384178645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCACCGGCCTATGTC	39682771	True	NA	25	True	AATATA	-13	NA	39700063	39728658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
WTC11_00036522	chr17	+	4539	27	FSM	ENSG00000141736.14	ENST00000578373.5	4523	27	-16	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	179.295201360129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTGTATGGGGAGGC	39682771	True	NA	16	True	AATAAA	-16	NA	39700063	39728577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39700312_39706989_39707205_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
WTC11_00036523	chr17	+	4930	17	FSM	ENSG00000141736.14	ENST00000583038.5	4930	17	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_3	62.6642840859129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGAAAAAAAAAATTA	39707347	False	NA	NA	False	AATAAA	-9	NA	39707403	39726351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048
WTC11_00036538	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	63.9788188090273	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	39955868	True	NA	16	True	AATAAA	-16	NA	39980806	39997959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
WTC11_00036539	chr17	+	3201	3	FSM	ENSG00000108344.15	ENST00000580980.1	580	3	0	-2621	0	2621	multi-exon	FALSE	canonical	3	958	junction_1	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCCGTTCCTGTCTCCCC	39986643	False	NA	NA	False	AAGAAA	-30	NA	39986683	39992773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39986713_39988682_39988820_39989738
WTC11_00036546	chr17	+	3424	6	FSM	ENSG00000188895.12	ENST00000339569.9	3424	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	7.22772439983706	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAACTTCTGCTTC	40130986	False	NA	24	True	AATAAA	-15	NA	40131000	40136787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40131585_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
WTC11_00036549	chr17	+	3867	14	NNC	ENSG00000108349.17	novel	3890	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	102	junction_13	118.01554405693	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	40126950	False	NA	18	True	AATAAA	-19	NA	40140554	40172171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170451
WTC11_00036550	chr17	+	4100	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	-217	7	2	0	multi-exon	FALSE	canonical	3	360	junction_13	58.8052648289048	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTCCCTTGCCAG	40140227	False	NA	11	True	AATAAA	-12	NA	40140319	40172164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
WTC11_00036555	chr17	+	4458	16	NNC	ENSG00000108352.13	novel	4243	15	NA	NA	-58	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	1	junction_2	17.5354878270704	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	40177384	False	NA	14	True	GATAAA	-14	NA	40177411	40195650	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_40178382_40181298_40181456_40181615_40181695_40184213_40184350_40184580_40184679_40188865_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
WTC11_00036556	chr17	+	4243	15	FSM	ENSG00000108352.13	ENST00000620260.6	4243	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	12	junction_1	12.9372504412488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	40177276	True	NA	14	True	GATAAA	-14	NA	40177469	40195650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40178382_40181615_40181695_40184213_40184350_40184580_40184679_40188865_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
WTC11_00036558	chr17	+	3783	11	FSM	ENSG00000108352.13	ENST00000545893.5	1527	11	-437	-1819	-437	0	multi-exon	FALSE	canonical	3	37	junction_1	6.40624695121879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	NA	False	NA	14	True	GATAAA	-14	NA	40188100	40195650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
WTC11_00036559	chr17	+	568	3	FSM	ENSG00000108352.13	ENST00000469209.1	662	3	0	94	0	-94	multi-exon	FALSE	canonical	3	46	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCAGGGCCCAAG	NA	False	NA	NA	False	NA	NA	NA	40189209	40190943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40189376_40190433_40190532_40190639
WTC11_00036561	chr17	+	7497	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	55	junction_5	10.2180312812844	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	40217205	True	NA	16	True	AATAAA	-21	NA	40219298	40284136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
WTC11_00036564	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_11	49.0477925131521	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	40269477	True	NA	9	True	AATAAA	-19	NA	40287878	40304657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
WTC11_00036569	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17.0861786248418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	40317065	True	NA	NA	False	NA	NA	NA	40318280	40356331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
WTC11_00036570	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.3141017767797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	40342247	True	NA	7	True	NA	NA	NA	40342362	40356795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
WTC11_00036573	chr17	+	2077	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	-9	2	-2	1	multi-exon	FALSE	canonical	3	89	junction_1	9	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGTGTGTGTGGT	40818054	True	NA	3	True	ATTAAA	-13	NA	40819103	40836268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40819209_40833114_40833200_40834381
WTC11_00036575	chr17	+	1621	4	FSM	ENSG00000173812.11	ENST00000469308.1	815	4	-183	-623	-133	0	multi-exon	FALSE	canonical	1	11	junction_1	2112.35371617119	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	NA	False	NA	-2	True	TTTAAA	-10	NA	41688751	41691622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689266_41689777_41689942_41690087_41690190_41690781
WTC11_00036576	chr17	+	1136	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	-16	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	41632428	True	NA	6	True	AATAAA	-2	NA	41688884	41691630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689070_41690087_41690190_41690781
WTC11_00036577	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	4597	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	41632428	True	NA	22	True	AATAAA	-18	NA	41688884	41691646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41690190_41690781
WTC11_00036578	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	325.419046086051	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	41632428	True	NA	11	True	AATAAA	-17	NA	41688884	41692668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
WTC11_00036579	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	20.0929936809259	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	41799427	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
WTC11_00036580	chr17	+	268	2	FSM	ENSG00000141756.19	ENST00000487489.1	578	2	310	0	-75	0	multi-exon	FALSE	canonical	3	99	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCGGGATGGACCAGG	41819154	False	NA	NA	False	NA	NA	NA	41819179	41819577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41819400_41819529
WTC11_00036585	chr17	+	2916	4	FSM	ENSG00000168256.18	ENST00000307641.9	2948	4	32	0	32	0	multi-exon	FALSE	canonical	2	4	junction_1	133.868094281896	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCCTCCCCCTTTTT	42016993	True	NA	35	True	AATAAA	-24	NA	42017051	42025644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42017627_42021563_42021672_42022398_42022641_42023653
WTC11_00036586	chr17	+	2390	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	-17	-1376	-11	0	multi-exon	FALSE	canonical	3	23	junction_3	109.68449069946	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	42014291	True	NA	32	True	AATAAA	-21	NA	42020060	42025641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
WTC11_00036590	chr17	+	1048	4	FSM	ENSG00000168256.18	ENST00000491638.5	1041	4	-7	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	121.387350613187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGAGTTCCTATT	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022375_42022641_42023653
WTC11_00036592	chr17	+	2278	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	-9	-808	0	0	multi-exon	FALSE	canonical	3	26	junction_3	116.810387665938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	42014327	True	NA	32	True	AATAAA	-21	NA	42020096	42025641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
WTC11_00036595	chr17	+	1594	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	203	0	-203	multi-exon	FALSE	canonical	3	224	junction_4	15.204851199535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAACCCCGTCTCTGCT	42450784	True	NA	NA	False	NA	NA	NA	42458857	42471236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
WTC11_00036600	chr17	+	4132	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	-22	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	45.7334669580166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	42450784	True	NA	20	True	AATAAA	-24	NA	42458857	42522582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
WTC11_00036601	chr17	+	585	6	FSM	ENSG00000033627.17	ENST00000592324.1	585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	116.81849168689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAACAGAGTCAAGAA	42468023	False	NA	NA	False	NA	NA	NA	42468035	42480717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42478926_42479050_42480666
WTC11_00036602	chr17	+	546	4	FSM	ENSG00000033627.17	ENST00000587375.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	46.2048578494609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGTGCAGTGGCATG	42470169	False	NA	NA	False	NA	NA	NA	42470181	42480965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42470219_42477659_42477743_42478462_42478590_42480666
WTC11_00036603	chr17	+	506	2	FSM	ENSG00000033627.17	ENST00000586001.1	587	2	0	81	0	-81	multi-exon	FALSE	canonical	3	285	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAACTTTAAAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	42477642	42478868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42477743_42478462
WTC11_00036604	chr17	+	496	4	FSM	ENSG00000033627.17	ENST00000589759.1	502	4	6	0	6	0	multi-exon	TRUE	canonical	2	4	junction_1	126.03438684211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGAACTTACCGAGAGA	NA	False	NA	NA	False	NA	NA	NA	42481291	42490608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42481359_42483037_42483132_42487154_42487368_42490486
WTC11_00036606	chr17	+	4652	1	FSM	ENSG00000033627.17	ENST00000592831.1	4652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	NA	False	NA	16	True	AATAAA	-20	NA	42517926	42522578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42517900_42522600
WTC11_00036607	chr17	+	425	1	FSM	ENSG00000267185.1	ENST00000590314.1	478	1	-11	64	-11	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAATTCCAAACAGCTG	NA	False	NA	NA	False	AAAAAG	-9	NA	42533520	42533945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42533500_42533900
WTC11_00036610	chr17	+	2958	4	NIC	ENSG00000108784.10	novel	2475	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	30	junction_3	69.9857128276908	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	42534580	True	NA	23	True	ATTAAA	-24	NA	42536242	42544449	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42537546_42538338_42538486_42538669_42538756_42543027
WTC11_00036615	chr17	+	2441	10	Fusion	ENSG00000266929.1_ENSG00000068120.15	novel	2071	10	NA	NA	-89	0	multi-exon	FALSE	canonical	3	91	junction_1	126.789803694886	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	42562008	False	NA	0	True	NA	NA	NA	42562044	42566260	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
WTC11_00036620	chr17	+	2225	7	FSM	ENSG00000068120.15	ENST00000591753.1	2225	7	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_4	18.46994555728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42556941	False	NA	14	True	ATTAAA	-14	NA	42563306	42566274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
WTC11_00036621	chr17	+	716	2	FSM	ENSG00000068120.15	ENST00000591583.1	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	42559096	False	NA	17	True	ATTAAA	-17	NA	42565461	42566277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42565806_42565905
WTC11_00036623	chr17	+	681	4	FSM	ENSG00000108788.12	ENST00000590084.5	666	4	-15	0	10	0	multi-exon	FALSE	canonical	0	0	junction_1	199.733711615129	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTACAAAAGAGTATGGC	42562583	True	NA	NA	False	NA	NA	NA	42567083	42569290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568469_42568944_42569203
WTC11_00036625	chr17	+	1087	5	FSM	ENSG00000108788.12	ENST00000585403.5	1068	5	-19	0	10	0	multi-exon	FALSE	canonical	0	0	junction_1	203.622659593671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTTCCCAGCCCCA	42562583	True	NA	-42	True	NA	NA	NA	42567083	42571729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569506_42570184_42571546
WTC11_00036626	chr17	+	2598	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	-20	8	-20	-8	multi-exon	FALSE	canonical	3	217	junction_1	88.3462575579169	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTAGCGGCTGATCT	42560686	False	NA	38	True	NA	NA	NA	42567051	42573231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
WTC11_00036627	chr17	+	2408	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	-48	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	158.690817346827	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	42560686	False	NA	10	True	AATAAA	-23	NA	42567051	42573203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
WTC11_00036628	chr17	+	2346	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	-20	8	-20	-8	multi-exon	FALSE	canonical	0	0	junction_1	204.844181974712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTAGCGGCTGATCT	42560686	False	NA	38	True	NA	NA	NA	42567051	42573231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
WTC11_00036631	chr17	+	590	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	-49	1	-49	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	861	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTGGCGCGCTTCTG	NA	False	NA	5	True	AATAAA	-14	NA	42577775	42578365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42577800_42578400
WTC11_00036632	chr17	+	1984	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	1632	junction_7	75.093275331417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592215	True	NA	-1	True	AATAAA	-5	NA	42609636	42615224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
WTC11_00036635	chr17	+	1903	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	-4	0	-4	0	multi-exon	TRUE	canonical	3	1632	junction_7	77.5241897732572	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592215	True	NA	1	True	AATAAA	-7	NA	42609636	42615226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
WTC11_00036639	chr17	+	1620	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	-12	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	94.0370139891734	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	42592249	True	NA	13	True	AATAAA	-19	NA	42609670	42615238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
WTC11_00036645	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	56.6647058484282	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42760763	False	NA	8	True	AATAAA	-18	NA	42760774	42763041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
WTC11_00036646	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	66.9842435867487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	42760618	False	NA	NA	False	NA	NA	NA	42760804	42762698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
WTC11_00036647	chr17	+	752	4	FSM	ENSG00000131477.11	ENST00000253796.10	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	21.4009345590327	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42761179	False	NA	8	True	AATAAA	-18	NA	42761226	42763041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42761359_42761833_42761900_42762354_42762464_42762596
WTC11_00036650	chr17	+	929	3	FSM	ENSG00000131475.7	ENST00000589219.1	914	3	-15	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_2	22.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATGCTTTCATAAGTA	42763844	True	NA	NA	False	NA	NA	NA	42773448	42775348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42773529_42773732_42773879_42774645
WTC11_00036651	chr17	+	1101	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	1167	junction_4	61.4576276795647	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	42763831	True	NA	13	True	ATTAAA	-14	NA	42773435	42779599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
WTC11_00036656	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_6	98.3850090206836	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	42814134	True	NA	12	True	AATAAA	-25	NA	42833396	42843760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
WTC11_00036662	chr17	+	6941	7	Fusion	ENSG00000131471.7_ENSG00000131480.9	novel	4011	4	NA	NA	-3118	1	intron_retention	FALSE	canonical	1	1	junction_2	30.6485453705936	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACTTTTTTTTTTTACT	42848054	False	NA	11	True	AATAAA	-23	NA	42848065	42858129	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_42849731_42850081_42852233_42852377_42852944_42854015_42854304_42854447_42854734_42855443_42855574_42856274
WTC11_00036664	chr17	+	355	1	FSM	ENSG00000260105.6	ENST00000585538.1	2073	1	277	1441	-125	70	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGCCCCATGTTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	42867421	42867776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42867400_42867800
WTC11_00036668	chr17	+	599	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	94	junction_1	5455.2643382333	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	42998245	False	NA	53	True	ATTAAA	-8	NA	42998258	43002949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
WTC11_00036669	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_2	1669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	42913290	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43000103_43002672_43002784_43002871
WTC11_00036670	chr17	+	640	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	-146	11	0	0	multi-exon	FALSE	canonical	3	7329	junction_1	2490.62265056351	4114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	42998198	True	NA	52	True	ATTAAA	-7	NA	42998272	43002948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
WTC11_00036672	chr17	+	482	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	-160	-4	3	4	multi-exon	FALSE	canonical	3	367	junction_2	4315.96990515715	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGCATGCTGTATGTA	42998201	False	NA	67	True	ATTAAA	-22	NA	42998275	43002963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
WTC11_00036673	chr17	+	1240	7	FSM	ENSG00000068079.8	ENST00000438323.2	1232	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	12	junction_4	4.74926894959167	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006600	True	NA	5	True	AGTAAA	-17	NA	43006731	43014456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013380_43013475_43013663_43013775_43013883_43014107
WTC11_00036674	chr17	+	1234	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	-52	0	-8	0	multi-exon	FALSE	canonical	3	11	junction_4	5.01386965216377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006600	True	NA	5	True	AGTAAA	-17	NA	43006731	43014456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
WTC11_00036681	chr17	+	3355	11	ISM	ENSG00000188554.15	ENST00000542611.5	2703	18	19490	-1477	778	-218	3prime_fragment	FALSE	canonical	1	2	junction_10	55.3375098825381	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCCAGGCCGTTCATT	43190680	False	NA	16	True	AATAAA	-18	NA	43190691	43211470	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43209900
WTC11_00036690	chr17	+	1575	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	-3	0	-2	0	multi-exon	FALSE	canonical	3	53	junction_1	325.43853490329	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	44070721	False	NA	-20	True	NA	NA	NA	44070747	44076300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
WTC11_00036694	chr17	+	2725	10	FSM	ENSG00000125319.15	ENST00000319977.8	2725	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	41.9349878964635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140479	True	NA	4	True	AATAAA	-14	NA	44141905	44162476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154552_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
WTC11_00036695	chr17	+	2589	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	42.2640509180083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140503	True	NA	4	True	AATAAA	-14	NA	44141929	44162476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44161870
WTC11_00036698	chr17	+	2642	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_2	28.7672653471886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	44187002	False	NA	-26	True	GGGGCT	-13	NA	44187049	44191691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44188934_44189589_44190500
WTC11_00036700	chr17	+	1906	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	-69	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	44185789	True	NA	-6	True	AATAAA	-2	NA	44187205	44191711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187744_44188934_44189092_44190500
WTC11_00036704	chr17	+	554	3	FSM	ENSG00000030582.18	ENST00000587109.5	535	3	-19	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCCACTGCTCTGCC	44345228	False	NA	NA	False	NA	NA	NA	44345245	44349474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44345606_44349157_44349303_44349425
WTC11_00036711	chr17	+	2200	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	-133	63	-77	0	multi-exon	FALSE	canonical	3	542	junction_1	107.422161742042	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACAGGGGTGTTTGTGT	44345151	False	NA	-42	True	NA	NA	NA	44345168	44353043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
WTC11_00036713	chr17	+	4622	8	FSM	ENSG00000180336.18	ENST00000409122.7	4610	8	-12	0	-12	0	multi-exon	FALSE	canonical	2	9	junction_2	5.22943006220661	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTCATTTTTCTAAA	44656068	True	NA	8	True	AATAAA	-18	NA	44656455	44675801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44656683_44657126_44657262_44662316_44662472_44665383_44665489_44666375_44668234_44669382_44669518_44673365_44673547_44673975
WTC11_00036714	chr17	+	837	1	FSM	ENSG00000279879.1	ENST00000623480.1	3483	1	-308	2954	-308	-2954	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGCCAAAAGCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	44689549	44690386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44689500_44690400
WTC11_00036717	chr17	+	3354	13	NNC	ENSG00000161692.18	novel	3015	14	NA	NA	0	333	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	17.5552698640608	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCCTTGATCTGCCCTCC	44705792	True	NA	48	True	GGGGCT	-15	NA	44708697	44750572	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
WTC11_00036723	chr17	+	3442	4	FSM	ENSG00000167131.17	ENST00000417826.3	3442	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	44899410	True	NA	8	True	NA	NA	NA	44899728	44905390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
WTC11_00036725	chr17	+	2460	11	FSM	ENSG00000136448.13	ENST00000677949.1	2460	11	0	0	0	0	multi-exon	FALSE	canonical	2	498	junction_8	74.8906536224648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATTATATATA	45047808	True	NA	-6	True	AATAAA	-4	NA	45061303	45105960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858
WTC11_00036728	chr17	+	6456	10	FSM	ENSG00000136448.13	ENST00000587014.2	6456	10	0	0	0	0	multi-exon	FALSE	canonical	2	498	junction_8	78.7336500761967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCACTTGTTTCTAA	45047808	True	NA	NA	False	NA	NA	NA	45061303	45108974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708
WTC11_00036729	chr17	+	4761	11	FSM	ENSG00000136448.13	ENST00000587670.2	4756	11	-5	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	225.771654553888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATAAAGAAAGCAGCTG	45047805	True	NA	NA	False	AATACA	-12	NA	45061300	45108989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45061461_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
WTC11_00036733	chr17	+	1905	10	FSM	ENSG00000181513.15	ENST00000586346.5	1579	10	0	-326	0	0	multi-exon	FALSE	canonical	3	21	junction_6	14.2473735937887	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134433	True	NA	12	True	AATAAA	-13	NA	45135646	45144176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
WTC11_00036735	chr17	+	2173	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	-346	0	-306	0	multi-exon	FALSE	canonical	3	44	junction_6	8.09663853432741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45135255	False	NA	12	True	AATAAA	-13	NA	45135340	45144176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
WTC11_00036744	chr17	+	2185	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	-10	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247464	True	NA	-16	True	NA	NA	NA	45247924	45269814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
WTC11_00036746	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	NA	False	NA	-6	True	AATAAA	-2	NA	45262079	45269824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45262344_45267112_45267329_45268008
WTC11_00036752	chr17	+	1528	3	FSM	ENSG00000204650.14	ENST00000582491.5	718	3	0	-810	0	661	multi-exon	FALSE	canonical	3	165	junction_1	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTTTATTAATTGATCA	45614521	True	NA	NA	False	NA	NA	NA	45620341	45631266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45620373_45621907_45622042_45629903
WTC11_00036754	chr17	+	2949	4	FSM	ENSG00000204650.14	ENST00000455565.5	2609	4	-235	-105	29	105	multi-exon	FALSE	canonical	3	29	junction_1	79.9388655299925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTCTATCACCCTGG	45614554	False	NA	124	True	TTTAAA	-36	NA	45620374	45638064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45621153_45621907_45622042_45629903_45630159_45636282
WTC11_00036755	chr17	+	1786	2	FSM	ENSG00000204650.14	ENST00000585677.1	654	2	-910	-222	864	0	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTCTTTTAGTTTTTC	NA	False	NA	14	True	AGTAAA	-22	NA	45638064	45646230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45639521_45645900
WTC11_00036765	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_15	33.1012084371553	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	12	True	AATAAA	-20	NA	46590668	46757464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
WTC11_00036766	chr17	+	548	6	FSM	ENSG00000073969.18	ENST00000571864.5	548	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	111.868494224245	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCACTTAATCTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	46590754	46640696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46637375_46637543_46640053_46640162_46640642
WTC11_00036768	chr17	+	3069	5	FSM	ENSG00000108433.17	ENST00000640621.1	3059	5	-10	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	19.904459299363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTCTTCCTCCCAGT	46917715	True	NA	13	True	TATAAA	-24	NA	46923127	46937696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028
WTC11_00036769	chr17	+	1240	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	5	0	-3	0	multi-exon	TRUE	canonical	3	8	junction_6	120.117188149277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	46917712	True	NA	NA	False	TTTAAA	-36	NA	46923124	46941143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
WTC11_00036770	chr17	+	3939	6	FSM	ENSG00000108433.17	ENST00000640051.2	3932	6	-7	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	35.1431358873963	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAGTCCAAAAAAGATTT	46917740	True	NA	9	True	AATAAA	-21	NA	46923152	46942020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
WTC11_00036772	chr17	+	3821	5	FSM	ENSG00000108433.17	ENST00000640608.1	3871	5	50	0	-3	0	multi-exon	FALSE	canonical	3	40	junction_4	131.805728251848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACCTTAGTCCAAAAAA	46917712	True	NA	4	True	AATAAA	-16	NA	46923124	46942015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598
WTC11_00036776	chr17	+	1444	4	FSM	ENSG00000108433.17	ENST00000575949.6	1444	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_3	12.684198393627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTCATTCTAC	46917740	True	NA	9	True	AATAAA	-21	NA	46923152	46933267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066
WTC11_00036779	chr17	+	895	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	-10	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.168691763099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	46917775	True	NA	NA	False	NA	NA	NA	46923187	46935586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
WTC11_00036808	chr17	+	4121	9	FSM	ENSG00000198933.10	ENST00000361722.7	4121	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	4.29389100932942	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCTCAATCTGTGC	47694772	False	NA	31	True	AATAAA	-13	NA	47695263	47712050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47696338_47696710_47696834_47697088_47697194_47698594_47698776_47699319_47699496_47699635_47699698_47708393_47708513_47708724_47709453_47710497
WTC11_00036813	chr17	+	3295	9	NNC	ENSG00000167182.16	novel	3026	7	NA	NA	-5	824	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	53.305575458858	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAAGCATGTAAAGGAC	47894560	True	NA	NA	False	NA	NA	NA	47896230	47929781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_47896294_47897814_47897928_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723_47929061_47929733
WTC11_00036814	chr17	+	665	7	FSM	ENSG00000108439.11	ENST00000583599.6	696	7	31	0	-11	0	multi-exon	FALSE	canonical	2	3	junction_1	31.5471428535489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCACCGCGGGGAGGAAG	47940158	True	NA	NA	False	NA	NA	NA	47941536	47946733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47941603_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
WTC11_00036815	chr17	+	3449	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	-33	1	-10	-1	multi-exon	FALSE	canonical	3	68	junction_1	9.7082439194738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTTCAACCCGGCCT	47940159	True	NA	21	True	AATAAA	-22	NA	47941537	47949307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
WTC11_00036816	chr17	+	1372	6	FSM	ENSG00000108439.11	ENST00000582171.6	1372	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.7958577343437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTTTTTTTT	47940217	True	NA	NA	False	AAAACA	-20	NA	47941595	47947413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47941814_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
WTC11_00036817	chr17	+	503	4	FSM	ENSG00000108439.11	ENST00000585320.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	45.0357882380471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTGGCTCTATGAGAG	47940239	True	NA	NA	False	NA	NA	NA	47941617	47946749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47941814_47944615_47944716_47946322_47946394_47946613
WTC11_00036820	chr17	+	744	4	FSM	ENSG00000108465.15	ENST00000579853.5	714	4	8	-38	-2	0	multi-exon	FALSE	canonical	3	362	junction_1	89.1889380285844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAAGTGGCCCGGCCTGG	47963646	True	NA	NA	False	NA	NA	NA	47971015	47974447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47974032_47974399
WTC11_00036829	chr17	+	2782	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	-54	31	0	0	multi-exon	FALSE	canonical	3	362	junction_1	64.3913653674489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	47963680	True	NA	-4	True	NA	NA	NA	47971049	47981741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
WTC11_00036830	chr17	+	1843	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	-9	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	93.568062118015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	47963734	True	NA	36	True	AATAAA	-26	NA	47971103	47981781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
WTC11_00036836	chr17	+	4820	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	-148	0	-107	0	multi-exon	FALSE	canonical	3	161	junction_1	27.7342297531408	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	NA	False	NA	-10	True	AATAAA	-17	NA	48048221	48061479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
WTC11_00036837	chr17	+	4831	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	8	0	-8	multi-exon	FALSE	canonical	3	50	junction_3	67.1553423042426	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTAGGGAGGACTGGC	48039495	True	NA	-1	True	AATAAA	-11	NA	48048358	48061537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
WTC11_00036838	chr17	+	4394	6	FSM	ENSG00000082641.16	ENST00000585291.5	4390	6	-4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.6263662194678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	48039495	True	NA	-2	True	AATAAA	-25	NA	48048358	48061487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057343_48057503_48058294
WTC11_00036839	chr17	+	4435	7	NIC	ENSG00000082641.16	novel	4839	6	NA	NA	28	-2	intron_retention	FALSE	canonical	2	4	junction_2	78.7416662257029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTAAGTGCACTTTT	48039534	False	NA	-12	True	AATAAA	-15	NA	48048397	48061477	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
WTC11_00036842	chr17	+	2190	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	-18	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	86.4265905584361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	48053166	True	NA	NA	False	NA	NA	NA	48054691	48059653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
WTC11_00036845	chr17	+	2739	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	-6	0	3	0	multi-exon	TRUE	canonical	3	13	junction_1	53.3731569007401	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	48107533	False	NA	14	True	AATAAA	-24	NA	48107551	48123074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
WTC11_00036846	chr17	+	2100	7	NIC	ENSG00000002919.15	novel	2733	8	NA	NA	1	-328	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	48.8549440236662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTTGCAATTTGTGT	48107542	False	NA	15	True	AATAAA	-16	NA	48107560	48122746	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48107597_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
WTC11_00036849	chr17	+	3716	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	-10	-71	-1	71	multi-exon	TRUE	canonical	2	74	junction_1	19.394300422776	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCTCCCGAGTTCACACC	48829262	True	NA	NA	False	NA	NA	NA	48831024	48865316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
WTC11_00036852	chr17	+	670	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	-24	0	-2	0	multi-exon	FALSE	canonical	3	821	junction_1	1508.36523677125	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880611	True	NA	38	True	ATTAAA	-18	NA	48892762	48895871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
WTC11_00036853	chr17	+	2216	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	-2	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	701	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	48880613	True	NA	35	True	ATTAAA	-15	NA	48892764	48895868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48895335_48895654
WTC11_00036855	chr17	+	623	6	Fusion	ENSG00000159199.14_ENSG00000289021.1	novel	598	5	NA	NA	0	-57	multi-exon	FALSE	non_canonical	0	0	junction_5	1676.4522778773	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAATTATATAGTGCAAT	48880613	True	NA	NA	False	AAAAAG	-2	NA	48892764	48945706	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654_48895871_48945680
WTC11_00036856	chr17	+	374	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	-30	15	5	0	multi-exon	FALSE	canonical	3	2767	junction_1	754.729237688737	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGGGTGGTCTACA	48880620	True	NA	NA	False	GGGGCT	-45	NA	48892771	48895334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
WTC11_00036857	chr17	+	401	3	FSM	ENSG00000159199.14	ENST00000504591.2	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	4271	junction_1	89.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGGGTGGTCTACA	48893287	False	NA	NA	False	GGGGCT	-45	NA	48893312	48895334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48893457_48894371_48894450_48895155
WTC11_00036858	chr17	+	679	3	FSM	ENSG00000159199.14	ENST00000502964.5	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	4169	junction_2	140.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48894125	False	NA	38	True	ATTAAA	-18	NA	48894166	48895871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48894450_48895155_48895335_48895654
WTC11_00036865	chr17	+	4250	5	FSM	ENSG00000159202.18	ENST00000513342.5	4250	5	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	19.1751792690447	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGAAGTGCCTGTGGG	48911145	False	NA	6	True	AATAAA	-15	NA	48911178	48929054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
WTC11_00036867	chr17	+	9013	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	-217	0	-217	0	multi-exon	FALSE	canonical	3	1007	junction_10	112.129230291277	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	48997135	False	NA	23	True	AATAAA	-24	NA	48997167	49056145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
WTC11_00036868	chr17	+	9010	15	NNC	ENSG00000159217.10	novel	8796	15	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	canonical	3	213	junction_10	281.374731978403	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	48997135	False	NA	23	True	AATAAA	-24	NA	48997167	49056145	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043969_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
WTC11_00036869	chr17	+	768	6	FSM	ENSG00000159217.10	ENST00000515586.5	768	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	484.895700125295	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAGAAAAAAACAAAACA	48997734	False	NA	NA	False	NA	NA	NA	48997762	49036933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49036549
WTC11_00036876	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	262.43910536288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49781651	True	NA	24	True	AATAAA	-18	NA	49788705	49829096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
WTC11_00036878	chr17	+	2607	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	295	junction_1	137.532723378838	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49801993	True	NA	24	True	AATAAA	-18	NA	49815045	49829096	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
WTC11_00036880	chr17	+	5025	26	FSM	ENSG00000005884.18	ENST00000320031.13	4889	26	-137	1	5	0	multi-exon	FALSE	canonical	3	49	junction_5	12.0197171347748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCTGCATCTGCTTCC	50055189	True	NA	16	True	AATAAA	-16	NA	50055972	50090480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50056646_50064076_50064205_50064527_50064608_50068055_50068306_50070843_50070931_50071310_50071519_50071985_50072183_50073915_50074005_50074143_50074281_50074447_50074535_50075458_50075527_50075598_50075736_50076325_50076476_50076583_50076682_50076973_50077122_50077378_50077448_50078045_50078126_50078206_50078285_50078823_50078927_50079075_50079259_50079434_50079558_50080261_50080376_50081309_50081409_50087743_50087870_50088224_50088367_50089109
WTC11_00036881	chr17	+	4596	27	NIC	ENSG00000005884.18	novel	4889	26	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	17.332119514471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGCTGCATCTGCTTC	50055196	True	NA	15	True	AATAAA	-15	NA	50055979	50090479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50056017_50056437_50056646_50064076_50064205_50064527_50064608_50068055_50068306_50070843_50070931_50071310_50071519_50071985_50072183_50073915_50074005_50074143_50074281_50074447_50074535_50075458_50075527_50075598_50075736_50076325_50076476_50076583_50076682_50076973_50077122_50077378_50077448_50078045_50078126_50078206_50078285_50078823_50078927_50079075_50079259_50079434_50079558_50080261_50080376_50081309_50081409_50087743_50087870_50088224_50088367_50089109
WTC11_00036885	chr17	+	877	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	-12	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	11.2644968324772	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	50093501	True	NA	NA	False	TATAAA	-22	NA	50095374	50106368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
WTC11_00036887	chr17	+	3507	11	FSM	ENSG00000015532.10	ENST00000017003.7	3507	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	8.86622805932715	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATCACCATTCATTG	50341509	True	NA	42	True	NA	NA	NA	50346125	50361185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
WTC11_00036893	chr17	+	2179	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	-2	0	-2	0	multi-exon	FALSE	canonical	3	20	junction_10	9.78979060041634	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	50425967	True	NA	9	True	CATAAA	-21	NA	50426215	50474837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
WTC11_00036894	chr17	+	415	2	FSM	ENSG00000167107.13	ENST00000507792.1	716	2	301	0	301	0	multi-exon	FALSE	canonical	3	32	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCCACATTCCCCTGT	NA	False	NA	-54	True	NA	NA	NA	50474125	50474774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50474268_50474501
WTC11_00036900	chr17	+	2449	10	FSM	ENSG00000049283.19	ENST00000512379.5	2449	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10.7393357957247	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGCTCTTCTCAACC	50532067	True	NA	NA	False	NA	NA	NA	50532737	50542486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50532986_50536420_50536626_50536707_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
WTC11_00036901	chr17	+	3773	9	NIC	ENSG00000049283.19	novel	3879	10	NA	NA	-69	-147	intron_retention	FALSE	canonical	3	27	junction_4	6.0917464655056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTACAAACAGGATGGACA	50532590	False	NA	NA	False	NA	NA	NA	50532612	50543603	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50532986_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
WTC11_00036903	chr17	+	2657	17	FSM	ENSG00000006282.21	ENST00000006658.11	2634	17	-23	0	-2	0	multi-exon	FALSE	canonical	3	49	junction_1	19.0246550560056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	50545213	True	NA	16	True	AATAAA	-22	NA	50547150	50555852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50547286_50547719_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
WTC11_00036906	chr17	+	6984	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	3	0	-3	multi-exon	FALSE	canonical	3	628	junction_2	59.9526562185056	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTTGGTGTAGGTAGT	50704630	True	NA	29	True	AATAAA	-23	NA	50719602	50756216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
WTC11_00036908	chr17	+	3416	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	-40	-1092	-6	0	multi-exon	FALSE	canonical	3	236	junction_10	148.95301272549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	NA	False	NA	11	True	AATAAA	-14	NA	50719558	50752709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
WTC11_00036909	chr17	+	7244	13	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	61	junction_3	297.694287632277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGTGTAGGTAGTTA	NA	False	NA	31	True	AATAAA	-25	NA	50719558	50756218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50749218_50749345_50750500_50750642_50750746
WTC11_00036911	chr17	+	1978	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	-6	0	0	0	multi-exon	FALSE	canonical	3	547	junction_10	72.1338339477391	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	50704624	True	NA	11	True	AATAAA	-14	NA	50719596	50752709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
WTC11_00036916	chr17	+	1102	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	-116	0	-99	0	multi-exon	FALSE	canonical	3	172	junction_1	1740.53548082192	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	NA	False	NA	53	True	ATTAAA	-43	NA	51153459	51162061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
WTC11_00036919	chr17	+	1946	5	FSM	ENSG00000239672.8	ENST00000480143.5	964	5	-83	-899	-64	57	multi-exon	FALSE	canonical	3	172	junction_1	1804.10573415196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAATCGCTAGAGGCCA	51153481	False	NA	NA	False	NA	NA	NA	51153494	51162485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159
WTC11_00036920	chr17	+	1035	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	127	junction_4	2640.41310929845	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104107	True	NA	25	True	AATAAA	-17	NA	51153575	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036921	chr17	+	908	7	FSM	ENSG00000011052.21	ENST00000376392.10	894	7	-14	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2422.55656968694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104121	True	NA	25	True	AATAAA	-17	NA	51153589	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51171486
WTC11_00036923	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	3226.25745834086	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51164784	False	NA	25	True	AATAAA	-17	NA	51165434	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036924	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	3214.20669644937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	51165758	False	NA	24	True	AATAAA	-16	NA	51165814	51171743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036925	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_1	1058.96659531828	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036926	chr17	+	577	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	-9	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2920.09604103853	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
WTC11_00036927	chr17	+	756	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	-7	0	0	0	multi-exon	TRUE	canonical	3	365	junction_1	3094.591037197	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036928	chr17	+	866	4	FSM	ENSG00000243678.12	ENST00000393190.4	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	7133	junction_3	409.074022098147	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081651	False	NA	25	True	AATAAA	-17	NA	51166563	51171744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00036933	chr17	+	237	1	FSM	ENSG00000262902.1	ENST00000574371.1	625	1	412	-24	412	24	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGGGAGTATTACCTAAA	NA	False	NA	46	True	CATAAA	-30	NA	53106145	53106382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_53106100_53106400
WTC11_00036934	chr17	+	1026	8	FSM	ENSG00000141198.16	ENST00000570965.5	1026	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	147.830708472046	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGATCATGTACCCT	54900691	False	NA	NA	False	NA	NA	NA	54900721	54930206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903679_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072
WTC11_00036935	chr17	+	2261	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	-100	7	0	0	multi-exon	FALSE	canonical	3	246	junction_12	80.4601764850165	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	54896555	True	NA	NA	False	AATAAA	-9	NA	54900751	54961949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
WTC11_00036936	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	119.020707815442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	54896555	True	NA	NA	False	AATAAA	-9	NA	54900751	54961949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
WTC11_00036938	chr17	+	1872	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	-23	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	31.7260651495981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	54896637	True	NA	9	True	AGTAAA	-20	NA	54900833	54938033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
WTC11_00036940	chr17	+	1541	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	-19	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	118.343447632867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	54896637	True	NA	NA	False	NA	NA	NA	54900833	54961475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
WTC11_00036947	chr17	+	382	5	FSM	ENSG00000166263.13	ENST00000463234.1	423	5	0	41	0	-41	multi-exon	FALSE	canonical	1	2	junction_2	12.619429464124	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTCTAATTTAGTTTC	NA	False	NA	NA	False	AGTAAA	-11	NA	54999815	55043325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54999843_55000807_55000884_55031167_55031265_55034167_55034260_55043235
WTC11_00036950	chr17	+	964	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	-45	0	45	multi-exon	FALSE	canonical	3	10	junction_5	53.1473423606487	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATATGCTTATCAAAAT	55748318	True	NA	NA	False	AATAAA	-17	NA	55751093	55823135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
WTC11_00036953	chr17	+	8537	12	FSM	ENSG00000153933.10	ENST00000284061.8	8608	12	0	71	0	-71	multi-exon	FALSE	canonical	3	13	junction_8	3.69498207870938	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATTCTGCCATCTTT	56833304	True	NA	-53	True	NA	NA	NA	56834150	56869496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_56834261_56834777_56835260_56844018_56844179_56845689_56845810_56847921_56848066_56848695_56848854_56849180_56849233_56856511_56856626_56858593_56858666_56861790_56861919_56862139_56862252_56862611
WTC11_00036956	chr17	+	1942	13	FSM	ENSG00000121064.13	ENST00000262288.8	1921	13	-21	0	-19	0	multi-exon	FALSE	canonical	3	251	junction_9	27.2960874282174	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	56974345	True	NA	14	True	AATAAA	-23	NA	56978109	57006768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998384_56998499_57000854_57000993_57002017_57002182_57006172
WTC11_00036961	chr17	+	3909	11	FSM	ENSG00000121057.13	ENST00000337714.8	3909	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.055503148632	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCTTTGAGTCCATTT	57076810	True	NA	17	True	CATAAA	-17	NA	57085245	57121344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57085399_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
WTC11_00036966	chr17	+	1860	10	FSM	ENSG00000153944.12	ENST00000322684.7	1860	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_9	3.78430808131698	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGGTTAGTTTCCTT	57256915	True	NA	NA	False	ATTAAA	-13	NA	57257012	57632900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57631790
WTC11_00036968	chr17	+	802	1	FSM	ENSG00000280233.1	ENST00000623294.1	581	1	-77	-144	-77	144	mono-exon	FALSE	NA	NA	NA	NA	NA	2022	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAGAGATGTCATTACTGG	57988088	False	NA	NA	False	NA	NA	NA	57988102	57988904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57988100_57988900
WTC11_00036970	chr17	+	606	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	-42	3	10	0	multi-exon	FALSE	canonical	3	143	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	58690429	True	NA	4	True	ATTAAA	-15	NA	58692585	58695333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_58692789_58694930
WTC11_00036971	chr17	+	1629	2	FSM	ENSG00000108384.15	ENST00000486827.1	1609	2	-20	0	10	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	58690429	True	NA	4	True	ATTAAA	-15	NA	58692585	58695333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_58693812_58694930
WTC11_00036982	chr17	+	6227	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	-1	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.20568908339411	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	59150312	True	NA	NA	False	AATAAA	-34	NA	59155744	59206709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
WTC11_00036989	chr17	+	5292	31	FSM	ENSG00000141367.12	ENST00000393043.5	5292	31	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	149.19726315631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTACTGTCTGA	59619741	False	NA	NA	False	AATACA	-36	NA	59619857	59690826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635
WTC11_00036990	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	156.406312031479	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	59603211	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
WTC11_00036995	chr17	+	3689	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	-3	0	0	0	multi-exon	TRUE	canonical	3	493	junction_5	52.3675819220597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	59701447	True	NA	5	True	AATAAA	-36	NA	59707650	59842255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
WTC11_00037001	chr17	+	4498	1	FSM	ENSG00000062716.13	ENST00000592790.1	4325	1	-130	-43	-54	43	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTCCAACTTGGTG	59837452	True	NA	48	True	NA	NA	NA	59837800	59842298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59837800_59842300
WTC11_00037003	chr17	+	287	1	FSM	ENSG00000270264.1	ENST00000605113.1	538	1	425	-174	425	174	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCAGGAAATTCTAATG	NA	False	NA	NA	False	NA	NA	NA	59885439	59885726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59885400_59885700
WTC11_00037009	chr17	+	954	1	FSM	ENSG00000259349.3	ENST00000688062.1	950	1	-7	3	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCAGTCTATATAAATT	60526055	True	NA	NA	False	AATAAA	-12	NA	60526280	60527234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60526300_60527200
WTC11_00037012	chr17	+	3664	26	FSM	ENSG00000141376.23	ENST00000589222.5	3673	26	9	0	4	0	multi-exon	TRUE	canonical	2	4	junction_23	24.5254480081404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	60677306	True	NA	28	True	AATAAA	-22	NA	60677860	61392831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61380505_61380572_61388617_61388709_61391976
WTC11_00037013	chr17	+	3507	24	FSM	ENSG00000141376.23	ENST00000407086.8	3517	24	10	0	4	0	multi-exon	FALSE	canonical	3	15	junction_9	22.42011654093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	60677306	True	NA	28	True	AATAAA	-22	NA	60677860	61392831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
WTC11_00037017	chr17	+	2948	16	FSM	ENSG00000141376.23	ENST00000588874.5	2948	16	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	12.9556508477532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAGTTGCTGGGGTA	60886722	True	NA	27	True	AATAAA	-21	NA	60887049	61392830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60887212_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
WTC11_00037018	chr17	+	524	1	FSM	ENSG00000227694.1	ENST00000437246.1	471	1	-8	-45	-8	45	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATATCTTTTC	61069829	False	NA	3	True	AATATA	-16	NA	61069862	61070386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_61069900_61070400
WTC11_00037019	chr17	+	1568	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	-12	0	-12	0	multi-exon	TRUE	canonical	3	328	junction_1	35.4901538515708	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417431	True	NA	-17	True	NA	NA	NA	62423862	62448914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
WTC11_00037020	chr17	+	5820	9	FSM	ENSG00000087995.16	ENST00000311506.10	5799	9	-24	3	-2	-3	multi-exon	FALSE	canonical	3	293	junction_1	40.071615577613	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTCTGGCTCTGAATG	62417441	True	NA	NA	False	AATAAA	-13	NA	62423872	62453382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62424013_62424218_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
WTC11_00037021	chr17	+	5377	22	FSM	ENSG00000146872.19	ENST00000682085.1	5377	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	51.1566000866585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62477820	True	NA	-29	True	ATTAAA	-43	NA	62477838	62615444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62478082_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
WTC11_00037022	chr17	+	3552	21	FSM	ENSG00000146872.19	ENST00000343388.11	3227	21	-325	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.5234552605395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGGATTCTCTGA	62478752	True	NA	18	True	AATAAA	-18	NA	62478824	62613489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
WTC11_00037023	chr17	+	5640	22	FSM	ENSG00000146872.19	ENST00000346027.10	5640	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	40.9612393519984	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	62478752	True	NA	8	True	ATTAAA	-20	NA	62478824	62615481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
WTC11_00037028	chr17	+	5079	20	FSM	ENSG00000146872.19	ENST00000682274.1	5079	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	44.5541781682007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62479139	True	NA	-29	True	ATTAAA	-43	NA	62479205	62615444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
WTC11_00037038	chr17	+	4962	25	FSM	ENSG00000159640.17	ENST00000290866.10	4962	25	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.10650456661784	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAAGCCCTGTTGACGT	63477023	True	NA	11	True	AATAAA	-22	NA	63477060	63498373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63477344_63477930_63478099_63479006_63479101_63479768_63479913_63480336_63480529_63481090_63481189_63481565_63481739_63482465_63482690_63483028_63483174_63483459_63483559_63483848_63483972_63484329_63484542_63485235_63485373_63486556_63486716_63486985_63487074_63488647_63488792_63488940_63489133_63490953_63491052_63491208_63491382_63493435_63493660_63493921_63494067_63494371_63494471_63496393_63496517_63496797_63496986_63497136
WTC11_00037041	chr17	+	6344	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	-20	0	-9	0	multi-exon	FALSE	canonical	3	286	junction_3	26.2641496255934	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	63543212	True	NA	13	True	AATAAA	-14	NA	63550456	63594266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
WTC11_00037042	chr17	+	1391	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	236	0	-8	0	multi-exon	FALSE	canonical	3	90	junction_7	84.3554191187139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	63543213	True	NA	26	True	AATAAA	-27	NA	63550457	63594279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
WTC11_00037044	chr17	+	2488	17	FSM	ENSG00000198909.8	ENST00000584573.5	2480	17	-8	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	35.4091597436313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTGGGAGCCCCCAGC	63619790	True	NA	NA	False	GGGGCT	-29	NA	63622416	63693960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63622764_63632680_63632803_63634708_63634802_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685579_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
WTC11_00037045	chr17	+	4778	16	FSM	ENSG00000198909.8	ENST00000361733.8	4752	16	-26	0	-24	0	multi-exon	FALSE	canonical	3	69	junction_8	16.3440780984701	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGGGTCCTGTGGCAG	63619764	True	NA	14	True	AATAAA	-15	NA	63622390	63696305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63622764_63632680_63632803_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685591_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
WTC11_00037046	chr17	+	4764	16	FSM	ENSG00000198909.8	ENST00000577395.5	2016	16	-319	-2429	-24	0	multi-exon	TRUE	canonical	3	44	junction_8	21.0347860037183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGAGGGGTCCTGTGGC	63619764	True	NA	12	True	AATAAA	-13	NA	63622390	63696303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63622764_63632680_63632803_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685579_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
WTC11_00037047	chr17	+	4818	17	FSM	ENSG00000198909.8	ENST00000361357.7	4818	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	33.5351960632408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGAGGGGTCCTGTGGC	63619815	True	NA	12	True	AATAAA	-13	NA	63622441	63696303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63622764_63632680_63632803_63634708_63634802_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685591_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
WTC11_00037051	chr17	+	4337	19	FSM	ENSG00000198231.14	ENST00000578681.5	4337	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	112.906057312165	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63773286	False	NA	11	True	AGTAAA	-17	NA	63773862	63819317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63774377_63775107_63775179_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
WTC11_00037052	chr17	+	3969	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	84.0007826623614	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63769071	True	NA	11	True	AGTAAA	-17	NA	63774159	63819317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
WTC11_00037066	chr17	+	1680	12	FSM	ENSG00000087191.13	ENST00000578570.5	1680	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	516.336971142485	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGGACTCCAGTCTGT	63810360	True	NA	28	True	AATAAA	-17	NA	63827489	63832018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
WTC11_00037075	chr17	+	4322	20	NNC	ENSG00000258890.8	novel	2754	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	58.2309376986423	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	64505973	True	NA	14	True	AATAAA	-16	NA	64507010	64537946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64517718_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
WTC11_00037086	chr17	+	598	2	FSM	ENSG00000258890.8	ENST00000581980.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	64536843	False	NA	14	True	AATAAA	-16	NA	64536858	64537946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_64537113_64537602
WTC11_00037088	chr17	+	761	3	FSM	ENSG00000108370.17	ENST00000583473.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGCACCTGCAGATC	65137005	True	NA	NA	False	NA	NA	NA	65137430	65158791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_65137598_65153421_65153519_65158294
WTC11_00037099	chr17	+	2071	6	FSM	ENSG00000130935.10	ENST00000583108.5	2071	6	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	37.2912858453553	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTTTTGAATTTTTT	67737012	False	NA	31	True	AGTAAA	-35	NA	67737038	67744151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67737146_67737507_67737973_67738121_67739011_67739515_67739609_67743478_67743587_67743742
WTC11_00037100	chr17	+	7594	22	FSM	ENSG00000171634.19	ENST00000544778.6	7573	22	-21	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	76.3789632801207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTACAGTCTTCAACT	67819859	True	NA	NA	False	NA	NA	NA	67825502	67945891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408
WTC11_00037102	chr17	+	11292	30	FSM	ENSG00000171634.19	ENST00000321892.8	11292	30	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	78.9245489268427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	67820020	False	NA	10	True	AATAAA	-21	NA	67825663	67984378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
WTC11_00037103	chr17	+	10668	31	FSM	ENSG00000171634.19	ENST00000342579.8	10607	31	0	-61	0	0	multi-exon	FALSE	canonical	3	22	junction_5	76.7564980962524	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	67823909	True	NA	10	True	AATAAA	-21	NA	67826032	67984378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
WTC11_00037105	chr17	+	8376	24	ISM	ENSG00000171634.19	ENST00000306378.11	11075	28	609	24001	-30	0	5prime_fragment	FALSE	canonical	3	33	junction_4	75.165853165128	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAAAGTTTCCACT	67823988	True	NA	16	True	ATTAAA	-16	NA	67826111	67960377	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540
WTC11_00037106	chr17	+	10478	30	FSM	ENSG00000171634.19	ENST00000424123.7	8295	30	-30	-2153	-30	63	multi-exon	FALSE	canonical	3	22	junction_5	78.2580110284615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCCAAATTGTACAAAAAG	67823988	True	NA	73	True	AATGAA	-43	NA	67826111	67984441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
WTC11_00037109	chr17	+	1951	6	FSM	ENSG00000171634.19	ENST00000580465.5	1951	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	31.7893063780888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAAAGTTTCCACT	67940521	False	NA	16	True	ATTAAA	-16	NA	67940562	67960377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
WTC11_00037110	chr17	+	1582	8	FSM	ENSG00000171634.19	ENST00000581258.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	82.3179500349661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACTTTCTGGACTTTA	67947724	False	NA	15	True	AATAAA	-16	NA	67947753	67981762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
WTC11_00037113	chr17	+	2320	10	FSM	ENSG00000182481.10	ENST00000678388.1	2315	10	-5	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	237.575614993429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTAGATCATGTAGCTG	67979094	True	NA	-24	True	GGGGCT	-14	NA	68035707	68046588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771
WTC11_00037115	chr17	+	2104	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	-22	0	0	0	multi-exon	FALSE	canonical	3	4248	junction_4	279.890631197435	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979094	True	NA	19	True	AATAAA	-30	NA	68035707	68046854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
WTC11_00037117	chr17	+	1999	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	-22	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	282.770596066847	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979099	True	NA	19	True	AATAAA	-30	NA	68035712	68046854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
WTC11_00037118	chr17	+	4107	5	FSM	ENSG00000182481.10	ENST00000583392.2	4097	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	4225	junction_3	55.258483511584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGACTTCACCATGC	68040015	False	NA	5	True	AATAAA	-16	NA	68040290	68046840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837
WTC11_00037122	chr17	+	4732	1	FSM	ENSG00000277476.1	ENST00000622750.1	2735	1	-1909	-88	-1909	88	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGCCTTGGCGACAAA	NA	False	NA	NA	False	AATGAA	-28	NA	68131291	68136023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68131300_68136000
WTC11_00037123	chr17	+	2735	1	FSM	ENSG00000277476.1	ENST00000622750.1	2735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGTCTACTTACTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	68133200	68135935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68133200_68135900
WTC11_00037124	chr17	+	3485	1	FSM	ENSG00000267731.1	ENST00000591222.1	2919	1	-190	-376	-190	376	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGCTTAAATTTTACTT	NA	False	NA	NA	False	NA	NA	NA	68189693	68193178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68189700_68193200
WTC11_00037133	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	255.799267602787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	68243044	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
WTC11_00037143	chr17	+	578	5	ISM	ENSG00000108946.16	ENST00000585427.6	2726	11	-17	7893	16	-84	5prime_fragment	FALSE	canonical	3	23	junction_1	731.303630511978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGCAGGAGAGACTGT	68510321	False	NA	NA	False	NA	NA	NA	68512394	68524046	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_68512496_68515393_68515577_68522755_68522927_68523724_68523817_68524015
WTC11_00037144	chr17	+	4274	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	-24	3	-6	-3	multi-exon	FALSE	canonical	3	1318	junction_10	163.3	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTCTGGGTTGACAG	68495335	True	NA	NA	False	AATAAA	-14	NA	68512405	68533428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
WTC11_00037145	chr17	+	4318	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	9	0	9	0	multi-exon	TRUE	canonical	3	37	junction_1	496.040159664517	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	68510314	False	NA	NA	False	AATAAA	-9	NA	68512387	68533423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
WTC11_00037148	chr17	+	3717	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	-20	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	629.978354606511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68495359	True	NA	NA	False	AATAAA	-21	NA	68512429	68532762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
WTC11_00037152	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_9	472.948904921733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68515330	True	NA	18	True	AATAAA	-25	NA	68515399	68551319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
WTC11_00037156	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	32.649655434629	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	69502251	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
WTC11_00037170	chr17	+	2092	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	-17	0	8	0	multi-exon	FALSE	canonical	3	6	junction_5	61.9645059691433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	73231883	False	NA	NA	False	AATAAA	-26	NA	73232644	73245344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
WTC11_00037171	chr17	+	3607	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	38	0	-2	0	multi-exon	FALSE	canonical	3	94	junction_1	28.5418990258182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	73229484	True	NA	3	True	AATAAA	-10	NA	73232659	73248947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
WTC11_00037172	chr17	+	3441	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	8	0	8	0	multi-exon	FALSE	canonical	3	43	junction_3	51.8766566000547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	73231883	False	NA	17	True	AATAAA	-13	NA	73232644	73248874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
WTC11_00037174	chr17	+	452	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	870	junction_1	6336.68514978455	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	74203539	False	NA	15	True	ATTAAA	-17	NA	74203560	74209880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
WTC11_00037176	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6671.64312594731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	74128530	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
WTC11_00037177	chr17	+	543	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	-11	0	0	0	multi-exon	FALSE	canonical	3	12347	junction_3	1894.3465012153	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	74128530	True	NA	31	True	ATTAAA	-33	NA	74203692	74209896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
WTC11_00037180	chr17	+	601	2	FSM	ENSG00000170412.18	ENST00000582473.2	584	2	-17	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGGCTGGGGCGGGCA	74431583	True	NA	NA	False	NA	NA	NA	74432115	74439937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74432524_74439744
WTC11_00037192	chr17	+	912	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	235	junction_4	19.9138143006306	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	75007010	True	NA	10	True	AATAAA	-13	NA	75012651	75021261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
WTC11_00037196	chr17	+	1707	6	FSM	ENSG00000170190.16	ENST00000578376.5	1688	6	-19	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	35.4175097938858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAACCAGCGTCTAAG	75086258	True	NA	NA	False	NA	NA	NA	75087940	75104180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
WTC11_00037198	chr17	+	2170	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	-241	11	-14	0	multi-exon	FALSE	canonical	3	54	junction_1	23.1516738055805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTAGGAGG	NA	False	NA	NA	False	AATAAA	-11	NA	75087712	75106151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
WTC11_00037199	chr17	+	2051	6	FSM	ENSG00000170190.16	ENST00000450736.6	2051	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	19.9358972710034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTAGGAGG	75088923	False	NA	NA	False	AATAAA	-11	NA	75088937	75106151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
WTC11_00037201	chr17	+	2330	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	-179	0	-162	0	multi-exon	FALSE	canonical	3	39	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	75109779	False	NA	70	True	ATTAAA	-21	NA	75109789	75130272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75110380_75110462_75110607_75128676
WTC11_00037206	chr17	+	1903	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	-13	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	123.906008578833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	75201304	True	NA	-40	True	NA	NA	NA	75205706	75235691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
WTC11_00037207	chr17	+	2246	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	-13	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	123.203195347158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	75201304	True	NA	-21	True	NA	NA	NA	75205706	75235710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
WTC11_00037215	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	TRUE	canonical	3	1592	junction_3	38.1141377968858	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	75249002	True	NA	49	True	TATAAA	-19	NA	75261878	75266376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
WTC11_00037216	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_2	17.9876500843094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	75249035	True	NA	3	True	NA	NA	NA	75261911	75266330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
WTC11_00037222	chr17	+	556	5	FSM	ENSG00000177728.17	ENST00000582186.5	565	5	9	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	49.9699909945959	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTGTGCTCATCGGG	75455604	True	NA	NA	False	GGGGCT	-36	NA	75456649	75486339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75456752_75471799_75471956_75485427_75485548_75485870_75485999_75486289
WTC11_00037223	chr17	+	5449	31	FSM	ENSG00000177728.17	ENST00000581085.5	5432	31	-17	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_9	35.4768938888398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	75455578	True	NA	NA	False	ATTAAA	-23	NA	75456623	75500090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
WTC11_00037224	chr17	+	5435	32	FSM	ENSG00000177728.17	ENST00000314256.12	5412	32	-23	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_9	35.5635176511144	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTAGA	75455566	True	NA	NA	False	AATAAA	-17	NA	75456611	75500452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
WTC11_00037232	chr17	+	2694	11	FSM	ENSG00000182173.14_ENSG00000073350.14	ENST00000333213.11	1937	11	-15	-742	-13	742	multi-exon	FALSE	canonical	3	390	junction_8	62.7617718041803	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCAGGTGAGGCCGGGGCG	75511954	True	NA	NA	False	NA	NA	NA	75516512	75525477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
WTC11_00037233	chr17	+	3691	10	FSM	ENSG00000182173.14_ENSG00000073350.14	ENST00000680528.1	2555	10	-68	-1068	-58	753	multi-exon	FALSE	canonical	3	409	junction_1	53.0229393636889	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGCGGGCCTGCGGAA	75516378	False	NA	NA	False	NA	NA	NA	75516467	75525488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
WTC11_00037234	chr17	+	2085	11	FSM	ENSG00000182173.14	ENST00000545228.3	2063	11	-22	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	146.067929402727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGCTATAAAGCCAAAGC	75511967	True	NA	-29	True	NA	NA	NA	75516525	75524693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522522_75523274_75523336_75523662_75523780_75524261
WTC11_00037237	chr17	+	1931	11	FSM	ENSG00000182173.14	ENST00000679429.1	1921	11	-10	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	161.303719733923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	75511967	True	NA	13	True	ATTAAA	-16	NA	75516525	75524735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75519002_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
WTC11_00037241	chr17	+	1100	2	FSM	ENSG00000182173.14	ENST00000577197.2	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTCTGTATGTAC	75523128	False	NA	11	True	ATTAAA	-14	NA	75523151	75524733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75523780_75524261
WTC11_00037242	chr17	+	1407	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	-54	21	-19	0	multi-exon	FALSE	canonical	3	399	junction_6	40.2044159481069	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAATTAGCC	75523585	True	NA	-12	True	NA	NA	NA	75525677	75564700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
WTC11_00037243	chr17	+	3572	26	FSM	ENSG00000073350.14	ENST00000392550.8	3553	26	-19	0	-19	0	multi-exon	TRUE	canonical	3	251	junction_25	76.6549254777539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCACTACTTTAATAT	75523585	True	NA	10	True	AATAAA	-18	NA	75525677	75575209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574870
WTC11_00037244	chr17	+	3505	25	NIC	ENSG00000073350.14	novel	3553	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	153	junction_23	87.7728978513426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	75523604	True	NA	8	True	AATAAA	-16	NA	75525696	75575207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574873
WTC11_00037245	chr17	+	3480	25	FSM	ENSG00000073350.14	ENST00000167462.9	3480	25	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_23	86.535307100628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	75523633	True	NA	9	True	AATAAA	-17	NA	75525725	75575208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
WTC11_00037246	chr17	+	3527	22	FSM	ENSG00000073350.14	ENST00000545227.6	3527	22	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_20	88.4775488131929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	NA	False	NA	9	True	AATAAA	-17	NA	75557804	75575208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
WTC11_00037254	chr17	+	543	4	FSM	ENSG00000073350.14	ENST00000577211.1	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	23.2522400354604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	75574123	False	NA	8	True	AATAAA	-16	NA	75574153	75575207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75574261_75574452_75574496_75574609_75574669_75574873
WTC11_00037258	chr17	+	2457	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	-18	0	-10	0	multi-exon	FALSE	canonical	3	156	junction_2	188.661039047072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	75655871	True	NA	18	True	TATAAA	-13	NA	75667327	75708054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
WTC11_00037266	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	262.816845378823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	75655969	True	NA	NA	False	NA	NA	NA	75667425	75706545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
WTC11_00037269	chr17	+	3893	16	FSM	ENSG00000132478.10	ENST00000589666.6	3890	16	-3	0	-3	0	multi-exon	FALSE	canonical	3	48	junction_8	12.6237870704476	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGCTTGTTTACATGG	75782147	True	NA	12	True	AATAAA	-14	NA	75784802	75825799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75784985_75809759_75809970_75812111_75812289_75812454_75812586_75813077_75813214_75813760_75813879_75815168_75815254_75816769_75816913_75817325_75817527_75818102_75818169_75818641_75818817_75819683_75819786_75819919_75820109_75822476_75822659_75823264_75823523_75824261
WTC11_00037270	chr17	+	1004	3	FSM	ENSG00000132478.10	ENST00000587501.1	984	3	-20	0	-13	0	multi-exon	FALSE	canonical	1	3	junction_1	66.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAGTAAGAGTACTT	75782173	True	NA	8	True	ATTAAA	-22	NA	75784828	75794124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75784985_75792312_75792479_75793442
WTC11_00037271	chr17	+	1325	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	-13	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	75782186	True	NA	14	True	ATTAAA	-27	NA	75784841	75794198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
WTC11_00037272	chr17	+	1112	3	NIC	ENSG00000132478.10	novel	1312	4	NA	NA	19	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	66.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAACATTTCTGTTTT	75782225	True	NA	6	True	ATTAAA	-19	NA	75784880	75794190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75784985_75791759_75792020_75793442
WTC11_00037277	chr17	+	3618	9	NIC	ENSG00000261408.7	novel	3287	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_4	75.0782924685957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976676	True	NA	18	True	AATAAA	-21	NA	75979259	76005998	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
WTC11_00037278	chr17	+	3287	10	FSM	ENSG00000261408.7	ENST00000569284.1	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	77.0076154643563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	75976676	True	NA	19	True	AATAAA	-22	NA	75979259	76005999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
WTC11_00037286	chr17	+	1408	2	FSM	ENSG00000163597.16	ENST00000591956.1	556	2	-51	-801	-18	801	multi-exon	FALSE	canonical	3	1194	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGCCTGGGTGACAGA	76516777	True	NA	NA	False	NA	NA	NA	76557714	76562552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76557858_76561287
WTC11_00037291	chr17	+	2507	4	FSM	ENSG00000163597.16	ENST00000670737.2	2542	4	7	28	-2	-17	multi-exon	FALSE	canonical	3	645	junction_1	545.576759035793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	76516826	True	NA	2	True	NA	NA	NA	76557763	76565321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76557858_76558944_76559044_76561287_76561399_76563118
WTC11_00037292	chr17	+	2430	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	-20	27	-11	-17	multi-exon	FALSE	canonical	3	56	junction_2	569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	76516808	True	NA	2	True	NA	NA	NA	76557745	76565321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76557858_76561287_76561403_76563118
WTC11_00037295	chr17	+	3621	3	FSM	ENSG00000163597.16	ENST00000448136.5	3607	3	-14	0	-2	0	multi-exon	FALSE	canonical	3	696	junction_1	565.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTTCAAATTTACTGA	76516826	True	NA	29	True	AATAAA	-19	NA	76557763	76565348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76559044_76561287_76561399_76563118
WTC11_00037300	chr17	+	1193	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	-9	0	4	0	multi-exon	FALSE	canonical	3	10	junction_4	80.7480649922956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	76724398	True	NA	NA	False	ATTAAA	-32	NA	76726833	76733936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
WTC11_00037301	chr17	+	1020	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	10	junction_3	92.1315484631742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724410	True	NA	NA	False	ATTAAA	-17	NA	76726845	76733880	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727179_76732977_76733216_76733292_76733382_76733520
WTC11_00037303	chr17	+	1194	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	101.875741306096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724415	True	NA	NA	False	ATTAAA	-17	NA	76726850	76733880	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727358_76732977_76733216_76733292_76733382_76733520
WTC11_00037305	chr17	+	2560	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	-22	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	17.1974265310232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	76737086	True	NA	NA	False	AAAAAG	-12	NA	76737678	76779286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
WTC11_00037306	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	12.5320889893852	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	76737851	True	NA	16	True	TATAAA	-16	NA	76738070	76778727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
WTC11_00037307	chr17	+	2278	5	FSM	ENSG00000092931.12	ENST00000585692.5	964	5	-238	-1076	-238	0	multi-exon	FALSE	canonical	3	66	junction_4	6.29980158417708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGATTTTGAAAAGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	76766764	76779341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
WTC11_00037321	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	15.8922150753128	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
WTC11_00037322	chr17	+	5474	18	NNC	ENSG00000129657.16	novel	5500	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_17	46.6785369645278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77216271_77216296
WTC11_00037327	chr17	+	3984	11	FSM	ENSG00000184640.20	ENST00000423034.6	3984	11	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	144.442549132865	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	77373059	False	NA	27	True	AATAAA	-23	NA	77373189	77500594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77373553_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
WTC11_00037328	chr17	+	591	5	FSM	ENSG00000184640.20	ENST00000591020.5	582	5	-9	0	-9	0	multi-exon	FALSE	canonical	3	13	junction_1	268.862767039246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGCCTCTACTTCAT	77419296	True	NA	NA	False	NA	NA	NA	77419792	77488826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77419881_77482143_77482336_77487423_77487553_77488239_77488322_77488726
WTC11_00037332	chr17	+	3473	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	-213	-1569	183	0	multi-exon	FALSE	canonical	3	138	junction_1	148.033029347432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77451006	False	NA	26	True	AATAAA	-22	NA	77451030	77500593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
WTC11_00037334	chr17	+	3118	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	156.673837503345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77460955	True	NA	26	True	AATAAA	-22	NA	77466417	77500593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
WTC11_00037341	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	63.6465936943124	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	78159575	True	NA	15	True	AATAAA	-15	NA	78168580	78172720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
WTC11_00037346	chr17	+	1216	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	16.3095064303001	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179624	True	NA	9	True	AATAAA	-17	NA	78187358	78207701	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
WTC11_00037348	chr17	+	2590	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	1306	junction_3	185.581967514806	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	78200861	True	NA	11	True	AATAAA	-21	NA	78214236	78225635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
WTC11_00037349	chr17	+	2685	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	25	1	25	0	multi-exon	FALSE	canonical	3	77	junction_3	730.601250683299	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	NA	False	NA	11	True	AATAAA	-21	NA	78214210	78225635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
WTC11_00037350	chr17	+	484	2	FSM	ENSG00000089685.15	ENST00000590449.1	568	2	-17	101	0	-101	multi-exon	FALSE	canonical	3	1727	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGTAAGATGCCTGATGC	78200887	True	NA	NA	False	ATTAAA	-28	NA	78214262	78214998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679
WTC11_00037351	chr17	+	658	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	-10	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	842.78541159657	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGGCCGGAGCTGCC	78200877	True	NA	NA	False	NA	NA	NA	78214252	78223554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
WTC11_00037352	chr17	+	2456	3	FSM	ENSG00000089685.15	ENST00000374948.6	2446	3	-11	1	0	0	multi-exon	FALSE	canonical	3	122	junction_2	802.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	78200877	True	NA	11	True	AATAAA	-21	NA	78214252	78225635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78223464
WTC11_00037353	chr17	+	512	5	FSM	ENSG00000089685.15	ENST00000587746.5	492	5	-20	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	722.238317662529	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGAGAAAGGTAGGGC	78200989	False	NA	NA	False	NA	NA	NA	78214364	78222979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78222827
WTC11_00037356	chr17	+	2318	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	161	junction_3	61.9039478985961	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372159	True	NA	14	True	AATAAA	-18	NA	78378627	78424659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
WTC11_00037364	chr17	+	1034	3	NIC	ENSG00000267432.6	novel	2710	4	NA	NA	14	-21	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	4	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGATGAATGAATATG	78484661	False	NA	NA	False	NA	NA	NA	78484931	78490604	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78485163_78489374_78489575_78490001
WTC11_00037366	chr17	+	1381	6	FSM	ENSG00000167280.17	ENST00000578419.6	1496	6	115	0	115	0	multi-exon	FALSE	canonical	2	2	junction_3	21.1886762210384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCCGGTGCCCCTGGCG	79072664	True	NA	NA	False	NA	NA	NA	79074938	79082549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79075091_79077429_79077498_79077662_79077865_79080206_79080365_79080924_79081074_79081897
WTC11_00037369	chr17	+	621	3	FSM	ENSG00000167280.17	ENST00000577783.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTCCCCCAGCCCC	79080811	False	NA	NA	False	NA	NA	NA	79083085	79084234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79083124_79083481_79083591_79083760
WTC11_00037373	chr17	+	1101	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183231	True	NA	9	True	AAAAAG	-3	NA	79183579	79186282	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_79183693_79184346_79184578_79185525
WTC11_00037374	chr17	+	582	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	-15	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	79765170	True	NA	3	True	GATAAA	-15	NA	79778147	79779739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79778308_79778383_79778428_79779361
WTC11_00037378	chr17	+	1990	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	-20	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	7.15821206726931	2076	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	80036408	False	NA	20	True	TATAAA	-15	NA	80036631	80067901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
WTC11_00037383	chr17	+	3526	20	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	65	junction_1	69.2692766454263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	80095858	True	NA	14	True	AATAAA	-15	NA	80101536	80119877	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80101626_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
WTC11_00037384	chr17	+	968	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	-16	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	80095902	True	NA	NA	False	AATAAA	-18	NA	80101580	80102733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80101626_80101810
WTC11_00037386	chr17	+	3751	20	FSM	ENSG00000171298.13	ENST00000302262.8	3751	20	0	0	0	0	multi-exon	FALSE	canonical	2	247	junction_19	35.2322724130957	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGGTCTCTCTGGG	80095902	True	NA	18	True	AATAAA	-19	NA	80101580	80119881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
WTC11_00037400	chr17	+	3768	23	FSM	ENSG00000173821.20	ENST00000558116.5	3768	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	13.8017994993945	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCTATAAAA	80354095	True	NA	NA	False	ATTAAA	-25	NA	80354111	80382188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80354167_80354440_80354577_80358287_80358480_80360060_80360207_80361733_80361889_80363101_80363315_80363608_80363791_80364432_80364554_80367747_80367849_80367960_80368144_80369501_80369672_80369767_80369868_80371873_80371986_80372520_80372735_80372974_80373166_80374457_80374590_80375759_80375871_80376300_80376544_80376881_80376964_80377761_80377797_80379619_80379715_80380830_80380988_80381546
WTC11_00037402	chr17	+	6205	21	FSM	ENSG00000173821.20	ENST00000411702.7	6428	21	223	0	223	0	multi-exon	FALSE	canonical	3	74	junction_1	22.2842994056354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTATTTTACTTGTC	80371858	False	NA	-46	True	AATATA	-31	NA	80371873	80395253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80371986_80372520_80372735_80372974_80373166_80374457_80374590_80375759_80375871_80376300_80376544_80376881_80376964_80377761_80377797_80379619_80379715_80380830_80380988_80381546_80383071_80383676_80383929_80385038_80385172_80385537_80385622_80386249_80386431_80386689_80386892_80388611_80388690_80389172_80389368_80389827_80389918_80390011_80390197_80393344
WTC11_00037412	chr17	+	694	2	FSM	ENSG00000173818.17	ENST00000520910.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGCAGAATCACCCAGAA	80417202	False	NA	NA	False	NA	NA	NA	80417416	80418606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80417946_80418441
WTC11_00037421	chr17	+	2143	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	-14	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	21.0776020012346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	81032584	True	NA	15	True	AATAAA	-15	NA	81035147	81116224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
WTC11_00037422	chr17	+	3323	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	-19	0	10	0	multi-exon	TRUE	canonical	3	18	junction_13	18.0111733894243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	81035131	81117434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
WTC11_00037424	chr17	+	751	3	FSM	ENSG00000224877.4	ENST00000573090.1	741	3	-10	0	-4	0	multi-exon	FALSE	canonical	3	8	junction_2	456.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCGTAAACCTGAGTTAG	81223497	True	NA	-34	True	NA	NA	NA	81239300	81241214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81239448_81239567_81239944_81240986
WTC11_00037436	chr17	+	2895	22	FSM	ENSG00000185359.14	ENST00000677243.1	2895	22	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_21	151.429664566285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTCAGAAAGCATCAG	81683945	False	NA	1	True	AATAAA	-2	NA	81683962	81702105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701537
WTC11_00037442	chr17	+	2904	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	-11	0	0	0	multi-exon	FALSE	canonical	2	425	junction_17	78.996455042597	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	81674279	True	NA	17	True	AATAAA	-18	NA	81683999	81702121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
WTC11_00037443	chr17	+	3109	23	FSM	ENSG00000185359.14	ENST00000676729.1	3109	23	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	205.275510287922	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674326	True	NA	12	True	AATAAA	-13	NA	81684046	81702116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81684812_81685070_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
WTC11_00037444	chr17	+	4088	20	FSM	ENSG00000185359.14	ENST00000678658.1	4088	20	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_15	80.8976303286925	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCTGCCTGTTCTGAT	81676012	False	NA	NA	False	NA	NA	NA	81685732	81702915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
WTC11_00037459	chr17	+	1946	11	FSM	ENSG00000183048.12	ENST00000331531.9	1946	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	101.589369522603	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	81710014	True	NA	16	True	AATAAA	-16	NA	81712306	81721012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717756_81717862_81719830_81719888_81719975
WTC11_00037463	chr17	+	678	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	-10	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	1685	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871594	True	NA	28	True	AATAAA	-21	NA	81891712	81900356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81894466_81894587_81899919
WTC11_00037464	chr17	+	643	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	-7	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	1593.39769744475	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871620	True	NA	30	True	ATTAAA	-14	NA	81891738	81900254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
WTC11_00037465	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1730.40515486981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	31	True	ATTAAA	-15	NA	81891646	81900255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
WTC11_00037466	chr17	+	582	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	-7	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	1780	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	81871594	True	NA	28	True	ATTAAA	-12	NA	81891712	81900252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81894466_81894587_81899919
WTC11_00037467	chr17	+	990	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	-74	-278	2	0	multi-exon	FALSE	canonical	3	788	junction_1	1408.73875821207	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCCTCCAGACTGAAG	NA	False	NA	NA	False	NA	NA	NA	81891648	81900533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
WTC11_00037468	chr17	+	741	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	-19	0	0	0	multi-exon	FALSE	canonical	3	873	junction_1	1375.02218163926	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871594	True	NA	28	True	AATAAA	-21	NA	81891712	81900356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
WTC11_00037469	chr17	+	964	4	FSM	ENSG00000141552.18	ENST00000612413.4	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	892.962982933161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCCTCCAGACTGAAG	81871594	True	NA	NA	False	NA	NA	NA	81891712	81900533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893551_81893615_81894466_81894625_81899919
WTC11_00037471	chr17	+	794	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	-101	-94	2	0	multi-exon	FALSE	canonical	2	21	junction_1	1764.60151309014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	NA	False	NA	29	True	ATTAAA	-13	NA	81891648	81900253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
WTC11_00037472	chr17	+	709	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	109	junction_1	1688.07312901097	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871797	False	NA	30	True	ATTAAA	-14	NA	81891915	81900254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
WTC11_00037473	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2080	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81891776	False	NA	30	True	ATTAAA	-14	NA	81892062	81900254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81892107_81894466_81894587_81899919
WTC11_00037474	chr17	+	2136	1	FSM	ENSG00000141552.18	ENST00000573956.1	2136	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	81898097	False	NA	31	True	ATTAAA	-15	NA	81898119	81900255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81898100_81900300
WTC11_00037475	chr17	+	575	2	FSM	ENSG00000183979.8	ENST00000333383.8	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGTGCTGGAGGACT	81902145	True	NA	8	True	AATAAA	-20	NA	81902237	81902905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81902527_81902619
WTC11_00037479	chr17	+	1754	16	NNC	ENSG00000169696.16	novel	1764	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	129	junction_8	89.021944860055	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGCCTTCCTGTCATGCT	81974773	True	NA	8	True	AATAAA	-16	NA	81977628	82017403	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009185_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
WTC11_00037480	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	46.4727399187476	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974773	True	NA	11	True	AATAAA	-19	NA	81977628	82017406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
WTC11_00037482	chr17	+	5503	9	FSM	ENSG00000169696.16	ENST00000577733.5	5503	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_8	30.9303653389351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	NA	False	NA	9	True	AATAAA	-17	NA	82004344	82017404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
WTC11_00037485	chr17	+	3976	2	FSM	ENSG00000169696.16	ENST00000583693.5	3976	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	NA	False	NA	9	True	AATAAA	-17	NA	82013233	82017404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82017114_82017308
WTC11_00037493	chr17	+	1040	6	NNC	ENSG00000169750.9	novel	1038	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	52.5927751692188	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	82024438	True	NA	23	True	AATAAA	-16	NA	82031679	82034204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033604_82033698
WTC11_00037498	chr17	+	2255	13	FSM	ENSG00000169727.13	ENST00000578552.6	1841	13	-421	7	0	0	multi-exon	TRUE	canonical	3	889	junction_1	169.919650129112	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	82050664	True	NA	24	True	ATTAAA	-10	NA	82051476	82057463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
WTC11_00037505	chr17	+	1843	13	FSM	ENSG00000169727.13	ENST00000623691.3	1839	13	-4	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	330.811995533549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038792	True	NA	31	True	ATTAAA	-17	NA	82051892	82057470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055164_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
WTC11_00037506	chr17	+	1858	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	-16	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	352.891026223236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038792	True	NA	31	True	ATTAAA	-17	NA	82051892	82057470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
WTC11_00037509	chr17	+	2276	13	FSM	ENSG00000169727.13	ENST00000392358.6	2276	13	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	342.931480036464	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038857	False	NA	31	True	ATTAAA	-17	NA	82051957	82057470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
WTC11_00037511	chr17	+	2266	13	FSM	ENSG00000169727.13	ENST00000623761.3	1943	13	-284	-39	0	0	multi-exon	FALSE	canonical	3	190	junction_1	436.614500700815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	82038857	False	NA	24	True	ATTAAA	-10	NA	82051957	82057463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055164_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
WTC11_00037512	chr17	+	796	3	FSM	ENSG00000169727.13	ENST00000583486.1	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_2	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82056501	False	NA	31	True	ATTAAA	-17	NA	82056523	82057470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82056551_82056628_82056767_82056839
WTC11_00037516	chr17	+	2256	12	FSM	ENSG00000169660.17	ENST00000337014.10	2285	12	29	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	9.2477381643851	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	82416897	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441267_82441799_82441890_82442176
WTC11_00037521	chr17	+	1770	11	FSM	ENSG00000141562.19	ENST00000390006.8	1766	11	-4	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	259.339179454243	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCTCAATGGATTAC	82457803	True	NA	6	True	ATTAAA	-11	NA	82458180	82488255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458509_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
WTC11_00037522	chr17	+	878	8	FSM	ENSG00000141562.19	ENST00000577432.5	866	8	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	294.660510293678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCTGTTCAACGAGGA	82454006	True	NA	NA	False	NA	NA	NA	82458711	82484900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82478799_82478919_82481081_82481212_82483715_82483780_82484812
WTC11_00037523	chr17	+	1707	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	-56	-197	6	0	multi-exon	FALSE	canonical	0	0	junction_2	289.685523420379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	82453964	True	NA	13	True	ATTAAA	-18	NA	82458669	82488262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
WTC11_00037524	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	209.43722357137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	82454006	True	NA	10	True	ATTAAA	-15	NA	82458711	82488259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
WTC11_00037525	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.851929837254	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	82454035	True	NA	27	True	AATAAA	-14	NA	82458740	82490537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
WTC11_00037529	chr17	+	673	3	FSM	ENSG00000141568.21	ENST00000527313.6	779	3	0	106	0	-106	multi-exon	FALSE	canonical	2	8	junction_2	45	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGCCTTCAGTTTGTT	82519908	True	NA	NA	False	ACTAAA	-40	NA	82519976	82571870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82520308_82563353_82563549_82571723
WTC11_00037530	chr17	+	496	4	FSM	ENSG00000141568.21	ENST00000571160.1	496	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.4624331543013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCAGATCCCAGCGGT	NA	False	NA	NA	False	NA	NA	NA	82582774	82586043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82582935_82584012_82584189_82585251_82585272_82585903
WTC11_00037541	chr17	+	7075	38	FSM	ENSG00000141556.22	ENST00000683041.1	7075	38	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_20	99.4208503205008	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82744834	True	NA	-10	True	AATAAA	-6	NA	82752073	82945900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
WTC11_00037552	chr17	-	510	3	NNC	ENSG00000280279.1	novel	2096	5	NA	NA	5366	-1321	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	20	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTCCCGTCAGCC	NA	False	NA	NA	False	NA	NA	NA	71500	65419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_65737_69249_69308_71365
WTC11_00037553	chr17	-	344	3	NNC	ENSG00000280279.1	novel	2096	5	NA	NA	5366	-4907	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	21	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACAGCTCCATCGTTAC	NA	False	NA	NA	False	NA	NA	NA	71500	69005	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_69157_69249_69308_71365
WTC11_00037554	chr17	-	209	1	ISM	ENSG00000280136.2	ENST00000624936.2	1373	8	20877	8852	20877	-8852	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCCGGGCCAGTCTCG	NA	False	NA	NA	False	NA	NA	NA	97701	97492	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_97500_97700
WTC11_00037555	chr17	-	5406	9	FSM	ENSG00000272636.4	ENST00000613549.3	6062	9	111	545	111	-545	multi-exon	FALSE	canonical	2	5	junction_6	2.57087047515039	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGAAGGGTAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	181539	143333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_147578_148172_148270_149110_149193_156219_156378_161414_161542_162080_162191_164129_164205_172536_172617_181106
WTC11_00037556	chr17	-	680	4	FSM	ENSG00000272636.4	ENST00000609727.1	418	4	-369	107	111	-107	multi-exon	FALSE	canonical	2	3	junction_1	4.02768199119819	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGATGACCCAAGCGTCCGA	NA	False	NA	NA	False	NA	NA	NA	181539	163646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_163739_164129_164205_172536_172617_181106
WTC11_00037557	chr17	-	561	5	FSM	ENSG00000181031.16	ENST00000575130.5	579	5	18	0	18	0	multi-exon	FALSE	canonical	1	2	junction_4	3.63145976158349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGCAAAGACTGCAGGAA	-386056	True	NA	NA	False	NA	NA	NA	386215	319440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_319550_321271_321416_327466_327580_333758_333935_386196
WTC11_00037558	chr17	-	3621	2	FSM	ENSG00000183688.4	ENST00000329099.4	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAGATGCTTCTGTT	-445922	False	NA	NA	False	AATAAA	-19	NA	445939	439977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_443495_445835
WTC11_00037559	chr17	-	13010	22	FSM	ENSG00000141252.21	ENST00000437048.7	13089	22	78	1	0	-1	multi-exon	FALSE	canonical	3	17	junction_18	9.73200997433673	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTCTCCTGAAGTCT	-709833	True	NA	NA	False	ATTAAA	-17	NA	714761	508668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_519299_519825_519931_521600_521739_532841_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
WTC11_00037560	chr17	-	2616	18	FSM	ENSG00000141252.21	ENST00000291074.10	2695	18	9	70	6	-70	multi-exon	FALSE	canonical	3	10	junction_14	10.568936661052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTGCAGTGAGCCG	-709920	True	NA	NA	False	NA	NA	NA	714848	532362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
WTC11_00037564	chr17	-	6213	17	FSM	ENSG00000141252.21	ENST00000679361.1	2237	17	-24	-3952	6	8	multi-exon	FALSE	canonical	3	17	junction_13	9.89633770644474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTATTTTATAAATAAATAA	-709920	True	NA	NA	False	NA	NA	NA	714848	547663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
WTC11_00037568	chr17	-	1371	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	-2	0	2	multi-exon	FALSE	canonical	1	3	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGATTGTCTTTTT	-709886	True	NA	1	True	AATAAA	-16	NA	714814	704997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_706096_710532_710614_714622
WTC11_00037570	chr17	-	3746	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	-2	0	2	multi-exon	FALSE	canonical	3	245	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGTTATTTCGTCTTTT	-746924	True	NA	-8	True	AAAAAG	-27	NA	752264	744418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_748033_752132
WTC11_00037571	chr17	-	1182	3	FSM	ENSG00000179409.11	ENST00000437269.1	1182	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTCTCAGATCCGGC	-746834	True	NA	NA	False	NA	NA	NA	752174	746630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_747283_747544_748033_752132
WTC11_00037572	chr17	-	1015	3	FSM	ENSG00000179409.11	ENST00000573482.5	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAGGCAGAACGGGA	-746845	True	NA	NA	False	NA	NA	NA	752185	747166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_748033_749813_749910_752132
WTC11_00037573	chr17	-	2076	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-250	-47	243	multi-exon	FALSE	canonical	3	689	junction_6	29.7885779284611	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCACGGAGAGAAATAAAT	-771384	True	NA	NA	False	NA	NA	NA	782341	759079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
WTC11_00037574	chr17	-	2311	7	FSM	ENSG00000167699.14	ENST00000571073.5	2311	7	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_6	32.7587986484378	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAGCTGTGATACCAG	-766735	False	NA	-13	True	AATAAA	-24	NA	777692	759322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867
WTC11_00037575	chr17	-	2737	7	FSM	ENSG00000167699.14	ENST00000576239.5	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_4	31.5119025131775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTTTGAAAAT	-771337	True	NA	87	True	ATTAAA	-17	NA	782294	759451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_771462_775774_775920_776867_776989_778694_778745_782165
WTC11_00037578	chr17	-	1442	1	FSM	ENSG00000262228.3	ENST00000570809.1	1755	1	191	122	191	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAAACCTGAATCTATG	-765116	False	NA	NA	False	CATAAA	-22	NA	765128	763686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_763700_765100
WTC11_00037579	chr17	-	853	7	FSM	ENSG00000167699.14	ENST00000575790.5	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	247.458694645299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTCTCAGGCAGG	-771334	True	NA	NA	False	NA	NA	NA	782291	770043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778745_782165
WTC11_00037582	chr17	-	3046	8	FSM	ENSG00000167693.17	ENST00000336868.8	3045	8	0	-1	0	1	multi-exon	FALSE	canonical	3	365	junction_5	17.152378308347	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGCTTGTGGTCCT	NA	False	NA	1	True	NA	NA	NA	979776	799308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_805067_805248_819438_819546_822356_822458_823631_823766_825960_826079_979318
WTC11_00037583	chr17	-	1047	2	FSM	ENSG00000167693.17	ENST00000571281.1	1047	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGAGGTTTTTTGGGTG	-803952	False	NA	NA	False	NA	NA	NA	803984	800387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681
WTC11_00037584	chr17	-	1159	6	FSM	ENSG00000167693.17	ENST00000571684.5	1159	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	151.502607238291	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTAAGCAACACAGT	-825982	True	NA	NA	False	NA	NA	NA	826001	800480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_819438_819546_822356_822458_823631_823766_825960
WTC11_00037585	chr17	-	675	3	FSM	ENSG00000167693.17	ENST00000574018.1	508	3	-167	0	-167	0	multi-exon	FALSE	canonical	1	2	junction_2	206	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGTGGAATCAGC	NA	False	NA	-39	True	AGTAAA	-15	NA	805415	800787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_805209
WTC11_00037586	chr17	-	5395	23	FSM	ENSG00000159842.16	ENST00000302538.10	5395	23	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_22	14.0983118384513	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	NA	False	NA	-1	True	AATAAA	-34	NA	1179981	1003518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1179666
WTC11_00037587	chr17	-	5543	23	FSM	ENSG00000159842.16	ENST00000544583.6	5595	23	60	-8	60	0	multi-exon	FALSE	canonical	0	0	junction_22	25.6278193369421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	NA	False	NA	-1	True	AATAAA	-34	NA	1187262	1003518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1186799
WTC11_00037588	chr17	-	5963	23	FSM	ENSG00000159842.16	ENST00000574139.7	6026	23	63	0	63	0	multi-exon	FALSE	canonical	0	0	junction_22	25.6278193369421	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	-1229661	True	NA	-1	True	AATAAA	-34	NA	1229675	1003518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1228792
WTC11_00037593	chr17	-	1736	7	NNC	ENSG00000108953.17	novel	1818	7	NA	NA	0	46682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4517.91577131166	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTGGCTAAAATAACAAG	-1361551	True	NA	NA	False	NA	NA	NA	1400151	1297592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1297619_1344545_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00037594	chr17	-	1739	7	NNC	ENSG00000108953.17	novel	1818	7	NA	NA	0	46682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4517.91577131166	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTGGCTAAAATAACAAG	-1361551	True	NA	NA	False	NA	NA	NA	1400151	1297592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1297619_1344542_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00037595	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	11131	junction_2	760.132883119787	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	NA	False	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00037596	chr17	-	1377	4	FSM	ENSG00000108953.17	ENST00000466227.6	1377	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5997.38422610687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCGCCTCCATCCTTTA	NA	False	NA	-19	True	AATAAA	-26	NA	1365058	1344538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1345500_1354210_1354348_1361929_1362009_1364858
WTC11_00037597	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	5581.5333441826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	NA	False	NA	-20	True	AATAAA	-25	NA	1400220	1344539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
WTC11_00037601	chr17	-	795	3	FSM	ENSG00000108953.17	ENST00000486241.1	691	3	9	-113	0	103	multi-exon	FALSE	canonical	3	11792	junction_2	805.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGGTGATAATTTTATT	NA	False	NA	22	True	NA	NA	NA	1400200	1361567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1362009_1364858_1365059_1400046
WTC11_00037602	chr17	-	3869	4	NNC	ENSG00000167193.8	novel	3850	3	NA	NA	0	6892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.337398298417	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTTGTGGCGCAC	-1452447	True	NA	NA	False	NA	NA	NA	1456223	1413796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1413825_1420692_1423651_1436619_1437156_1455876
WTC11_00037603	chr17	-	3708	4	NNC	ENSG00000167193.8	novel	3850	3	NA	NA	0	6892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.707093338835	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTTGTGGCGCAC	-1452456	True	NA	NA	False	NA	NA	NA	1456232	1413796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1413825_1420692_1423651_1436789_1437156_1455876
WTC11_00037605	chr17	-	4988	33	NNC	ENSG00000197879.17	novel	4931	32	NA	NA	-29	50389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.2650584196305	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTTGTGGCGCAC	-1491206	True	NA	NA	False	NA	NA	NA	1492715	1413796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1413825_1464185_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
WTC11_00037606	chr17	-	3671	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	4	0	0	multi-exon	FALSE	canonical	3	197	junction_1	34.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1452447	True	NA	-4	True	AATAAA	-42	NA	1456223	1420692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1423651_1436789_1437156_1455876
WTC11_00037607	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	53	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1452456	True	NA	-4	True	AATAAA	-42	NA	1456232	1420692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1423651_1436619_1437156_1455876
WTC11_00037609	chr17	-	4931	32	FSM	ENSG00000197879.17	ENST00000648651.1	4931	32	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_31	39.9618965237802	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	-1491177	True	NA	0	True	AATAAA	-19	NA	1492686	1464185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
WTC11_00037610	chr17	-	4714	32	FSM	ENSG00000197879.17	ENST00000361007.7	4714	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_31	44.6993890317608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGCAATACGTGTT	-1490173	False	1509	-26	True	NA	NA	NA	1491682	1464211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1491599
WTC11_00037613	chr17	-	3064	14	FSM	ENSG00000132376.20	ENST00000406424.8	3194	14	160	-30	0	-2	multi-exon	FALSE	canonical	2	5	junction_11	59.4498446059251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTGCGTGTGACTGAT	-1516380	False	NA	-8	True	NA	NA	NA	1516582	1494578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515426_1515586_1515887_1516119_1516455
WTC11_00037614	chr17	-	2954	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	-248	0	-118	0	multi-exon	FALSE	canonical	3	99	junction_7	21.5299138428988	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-1516658	False	NA	-6	True	NA	NA	NA	1516860	1494576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
WTC11_00037615	chr17	-	2880	13	FSM	ENSG00000132376.20	ENST00000320345.10	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	53.9615990002767	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCTTGTCCTGCCA	-1516533	False	NA	NA	False	NA	NA	NA	1516735	1494756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515887_1516119_1516455
WTC11_00037623	chr17	-	1397	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	12	2479	0	16	multi-exon	FALSE	canonical	0	0	junction_7	185.361206457835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGATTTAAATGATTTAA	-1558592	True	NA	NA	False	NA	NA	NA	1562780	1520196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
WTC11_00037624	chr17	-	1345	11	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	13	26	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	141.467628806028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTAAGTTCATTTGT	-1558538	True	NA	NA	False	NA	NA	NA	1562726	1520186	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1562540
WTC11_00037627	chr17	-	639	7	FSM	ENSG00000174238.16	ENST00000576761.5	589	7	-50	0	-26	0	multi-exon	FALSE	canonical	0	0	junction_6	219.873195779345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGAGGACCCTTGGGCCC	-1558630	True	NA	NA	False	TTTAAA	-13	NA	1562818	1535470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1562655
WTC11_00037629	chr17	-	8119	14	FSM	ENSG00000167703.15	ENST00000301335.10	8133	14	10	4	10	-4	multi-exon	FALSE	canonical	3	40	junction_13	14.3452773500034	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCGAGCGGCTTCCT	-1628071	True	NA	-5	True	AATAAA	-13	NA	1628824	1569271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
WTC11_00037630	chr17	-	1400	10	FSM	ENSG00000167703.15	ENST00000572135.5	2074	10	0	674	0	-674	multi-exon	FALSE	canonical	2	4	junction_9	25.5492745904608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTAGGCAGGGCCGGTG	-1627497	False	NA	NA	False	NA	NA	NA	1628250	1585912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628113
WTC11_00037631	chr17	-	899	8	FSM	ENSG00000167703.15	ENST00000572801.5	915	8	16	0	10	0	multi-exon	FALSE	canonical	2	4	junction_6	26.5214583894257	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGAACAACATCCTCAAG	-1628071	True	NA	NA	False	NA	NA	NA	1628824	1590849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1627714_1627921_1628793
WTC11_00037632	chr17	-	3424	11	FSM	ENSG00000074660.17	ENST00000263071.9	3428	11	0	4	0	3	multi-exon	FALSE	canonical	3	8	junction_8	4.10487515035476	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAGTAAAACGGAGA	-1645643	False	NA	NA	False	AATAAA	-21	NA	1645732	1633861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640041_1640447_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645596
WTC11_00037633	chr17	-	1045	5	ISM	ENSG00000167705.12	ENST00000301336.7	1560	8	846	0	12	0	3prime_fragment	FALSE	canonical	3	86	junction_3	10.3923048454133	6320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-1648936	False	NA	-9	True	AATAAA	-24	NA	1649020	1646149	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_1646620_1646905_1646990_1647834_1647958_1648349_1648496_1648798
WTC11_00037634	chr17	-	7281	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	-1	0	1	multi-exon	FALSE	canonical	3	657	junction_29	202.864229699595	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGGCTGGTTTGTTTT	-1663506	True	NA	-7	True	AATAAA	-31	NA	1684867	1650627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
WTC11_00037635	chr17	-	7445	42	FSM	ENSG00000174231.17	ENST00000572621.5	7445	42	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_29	201.39857221427	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGTTTGT	-1663476	True	NA	-10	True	AATAAA	-28	NA	1684837	1650630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471
WTC11_00037641	chr17	-	2585	2	FSM	ENSG00000186594.15	ENST00000574306.2	2633	2	43	5	0	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTGTTATTATTTAAA	-1716100	True	NA	NA	False	AATATA	-9	NA	1716208	1711508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1714015_1716129
WTC11_00037642	chr17	-	4377	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	28	0	-28	multi-exon	FALSE	canonical	3	76	junction_1	14.4761873433581	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	-1828141	True	NA	10	True	AGTAAA	-39	NA	1829902	1779512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
WTC11_00037645	chr17	-	661	3	NNC	ENSG00000186532.12	novel	4405	11	NA	NA	11	-9097	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	60	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAATGCATACATTCTT	-1828130	True	NA	-13	True	ATTAAA	-14	NA	1829891	1821158	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1821508_1827860_1828007_1829725
WTC11_00037646	chr17	-	408	1	FSM	ENSG00000108958.4	ENST00000451056.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	552	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	NA	False	NA	NA	False	GGGGCT	-14	NA	1858446	1858038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1858000_1858400
WTC11_00037647	chr17	-	3609	2	FSM	ENSG00000185924.7	ENST00000331238.7	3614	2	0	5	0	-5	multi-exon	FALSE	canonical	1	2	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTTTTCATTT	-2025300	True	NA	-3	True	AATAAA	-12	NA	2025334	1934681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1937809_2024852
WTC11_00037648	chr17	-	6311	19	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	282	0	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_18	15.1483405765193	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	-2303467	False	1934	-4	True	AATAAA	-20	NA	2303503	2059842	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303013
WTC11_00037649	chr17	-	6068	19	FSM	ENSG00000070366.14	ENST00000263073.11	5974	19	-94	0	-94	0	multi-exon	FALSE	canonical	3	30	junction_18	13.6950923894494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	-2303843	False	NA	-4	True	AATAAA	-20	NA	2303879	2059842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303632
WTC11_00037650	chr17	-	2225	2	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACCGTCACACTCTACA	NA	False	NA	NA	False	NA	NA	NA	2156033	2153731	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_2153777_2153853
WTC11_00037651	chr17	-	3072	16	NNC	ENSG00000167721.11	novel	4245	15	NA	NA	0	35472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.544806610716	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTATGTTTTGTGTTG	-2321765	True	NA	NA	False	NA	NA	NA	2336443	2286923	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2286950_2323580_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
WTC11_00037652	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	62.143226599887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-2321779	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
WTC11_00037656	chr17	-	4942	6	FSM	ENSG00000070444.15	ENST00000174618.5	4925	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	15	junction_1	2.24499443206436	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGCTGCCAGCCTGCA	-2399912	True	NA	-12	True	AATAAA	-36	NA	2401077	2384072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2387650_2387856_2388050_2394042_2394155_2394304_2394347_2394874_2395455_2400639
WTC11_00037658	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_8	16.164280083483	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508376	True	NA	-7	True	AATAAA	-33	NA	2511888	2416048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
WTC11_00037659	chr17	-	3950	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.7394323972983	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508376	True	NA	-7	True	AATAAA	-33	NA	2511888	2416048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2417178_2418967_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
WTC11_00037660	chr17	-	4295	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	46.1866863933753	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAACACTAGCCATG	-2508376	True	NA	-16	True	AATAAA	-24	NA	2511888	2416057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2417152_2418587_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
WTC11_00037662	chr17	-	266	1	FSM	ENSG00000279872.1	ENST00000625037.1	234	1	13	-45	13	45	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	2424399	2424133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2424100_2424400
WTC11_00037663	chr17	-	5377	26	FSM	ENSG00000132361.18	ENST00000435359.5	5224	26	-150	-3	9	3	multi-exon	FALSE	canonical	3	117	junction_15	48.1356416805676	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCACCTGTGTGTTCTG	-2704860	True	NA	-6	True	AATAAA	-26	NA	2711783	2689382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696536_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
WTC11_00037664	chr17	-	5361	26	FSM	ENSG00000132361.18	ENST00000651024.2	5357	26	0	-4	0	3	multi-exon	TRUE	canonical	3	169	junction_15	42.6829427289169	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCACCTGTGTGTTCTG	-2704841	True	NA	-6	True	AATAAA	-26	NA	2711764	2689382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696539_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
WTC11_00037667	chr17	-	555	5	FSM	ENSG00000132361.18	ENST00000572014.1	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	9.23309265630969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGGCGGGGAAGAGACC	-2694039	False	NA	NA	False	NA	NA	NA	2694154	2692306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122
WTC11_00037672	chr17	-	3301	1	ISM	ENSG00000277200.2	ENST00000614400.2	4643	4	25550	1	25550	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGAGTCCAATCTCTTGC	-2724001	False	NA	-1	True	AATAAA	-14	NA	2724102	2720801	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_2720800_2724100
WTC11_00037673	chr17	-	885	4	FSM	ENSG00000277200.2	ENST00000614400.2	4643	4	148	3610	148	-3610	multi-exon	FALSE	canonical	3	9	junction_1	28.7054001888146	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCAGGCTGGCCGGGGTG	-2749469	False	NA	NA	False	NA	NA	NA	2749504	2724410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2725001_2730445_2730494_2735015_2735169_2749410
WTC11_00037674	chr17	-	794	4	NNC	ENSG00000277200.2	novel	4643	4	NA	NA	-35	-6386	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	7.48331477354788	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGCCAGGCACGGTGA	-2749652	False	NA	-4	True	AATAAA	-23	NA	2749687	2727186	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2727503_2730445_2730494_2735015_2735169_2749410
WTC11_00037675	chr17	-	4162	17	FSM	ENSG00000196689.13	ENST00000572705.2	4164	17	0	2	0	-2	multi-exon	FALSE	canonical	2	5	junction_16	4.29389100932942	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCGTGTCAAGTGTAAA	-3609397	False	NA	-2	True	AATAAA	-17	NA	3609411	3565447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3566988_3571523_3571640_3572121_3572250_3573632_3573956_3577125_3577193_3577597_3577764_3580456_3580528_3583337_3583431_3585767_3585927_3588187_3588368_3589806_3590106_3590251_3590393_3590963_3591117_3591186_3591354_3592066_3592384_3608426_3608566_3609308
WTC11_00037676	chr17	-	2644	14	FSM	ENSG00000196689.13	ENST00000574085.5	2644	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	3.73057097014835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGACCCCGTTGCCACGG	NA	False	NA	NA	False	NA	NA	NA	3592367	3566777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3566988_3571523_3571640_3572121_3572250_3573632_3573956_3577125_3577193_3577597_3577764_3580456_3580528_3583337_3583431_3585767_3585927_3588187_3588368_3589806_3590106_3590251_3590393_3590963_3591354_3592066
WTC11_00037677	chr17	-	3798	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	-10	0	10	multi-exon	FALSE	canonical	3	214	junction_2	11.5289490703475	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTTTTTTTG	-3629614	True	NA	NA	False	AAAAAG	-23	NA	3636250	3608229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
WTC11_00037678	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	35.9289422177844	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662660	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
WTC11_00037680	chr17	-	1303	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	-1	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3668669	False	NA	-6	True	AATAAA	-15	NA	3668679	3662894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3663886_3664678_3664799_3668487
WTC11_00037682	chr17	-	1999	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_6	10.9333064569985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTGATTTTTTTCTCT	-3696085	False	NA	1	True	AATAAA	-18	NA	3696096	3673225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
WTC11_00037683	chr17	-	2293	12	FSM	ENSG00000083454.22	ENST00000225328.10	2060	12	-233	0	-148	0	multi-exon	FALSE	canonical	3	33	junction_6	6.84177735353701	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696377	False	NA	0	True	AATAAA	-17	NA	3696388	3673226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
WTC11_00037684	chr17	-	1039	5	FSM	ENSG00000083454.22	ENST00000547933.1	1111	5	0	72	0	-72	multi-exon	FALSE	canonical	3	36	junction_2	5.3851648071345	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGGAGCCATTCCTGAA	-3695869	True	NA	NA	False	NA	NA	NA	3696240	3690155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
WTC11_00037685	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	30.554141381416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-3719091	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
WTC11_00037686	chr17	-	731	3	FSM	ENSG00000083457.12	ENST00000572433.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCAGTAGTGCCTTTA	-3720592	False	NA	-19	True	AATAAA	-11	NA	3720619	3714635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306
WTC11_00037687	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	278.314907074702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	-3719108	True	NA	-75	True	NA	NA	NA	3723854	3714691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
WTC11_00037688	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	32.025597400968	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-3838720	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
WTC11_00037689	chr17	-	2701	8	FSM	ENSG00000074356.17	ENST00000574911.5	2701	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	70.5184879507292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTCCCATATTTTG	-3825011	False	NA	NA	False	AATAAA	-41	NA	3825021	3811522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824059_3824093_3824941
WTC11_00037693	chr17	-	3572	16	FSM	ENSG00000004660.15	ENST00000348335.7	3572	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	7.05848583070209	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGCGTACATTTTCT	-3892811	True	NA	NA	False	AATAAA	-33	NA	3893053	3860314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
WTC11_00037694	chr17	-	4737	21	FSM	ENSG00000074370.18	ENST00000397041.8	4695	21	-45	3	-18	-1	multi-exon	FALSE	canonical	3	108	junction_15	27.5488656753776	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGAGGATCCTCAGCGT	-3963138	True	NA	-26	True	AATAAA	-17	NA	3964482	3923875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
WTC11_00037695	chr17	-	561	4	FSM	ENSG00000074370.18	ENST00000570773.5	989	4	428	0	-16	0	multi-exon	FALSE	canonical	3	147	junction_1	23.3428552000155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGGTCTCTGTCCCCA	NA	False	NA	NA	False	GATAAA	-40	NA	3930443	3925259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928662_3928781_3929327_3929446_3930300
WTC11_00037696	chr17	-	4498	21	FSM	ENSG00000074370.18	ENST00000397043.7	3197	21	179	-1480	0	4	multi-exon	FALSE	canonical	3	41	junction_1	37.5964094030268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGCGTCTGTTTTCCT	-3964214	False	NA	-16	True	AATAAA	-27	NA	3964236	3923865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925439_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
WTC11_00037700	chr17	-	8688	39	ISM	ENSG00000074755.15	ENST00000381638.7	11466	55	60522	1	-7328	-1	3prime_fragment	FALSE	canonical	2	9	junction_31	5.80792514240962	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTGTGTGGACTGGT	NA	False	NA	NA	False	AATATA	-26	NA	4082508	4004445	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_4006971_4008882_4008955_4009603_4009758_4013448_4013615_4014089_4014189_4014346_4014516_4016322_4016467_4017370_4017731_4017835_4017972_4019668_4019770_4021128_4021321_4022708_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752_4062918_4064360_4064830_4066446_4066541_4067162_4067243_4070683_4070925_4072607_4072757_4074149_4074352_4075096_4075179_4075262_4075430_4076636_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436
WTC11_00037702	chr17	-	2667	15	FSM	ENSG00000074755.15	ENST00000573183.1	2667	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	2.55250976931509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCCCTTTAAAGTTGC	-4062786	False	NA	NA	False	AATAAA	-17	NA	4062798	4022416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752
WTC11_00037705	chr17	-	7520	25	FSM	ENSG00000185722.18	ENST00000341657.9	7506	25	0	-14	0	14	multi-exon	FALSE	canonical	3	82	junction_15	18.4134612595122	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCTTGACCAGCTGCC	-4258747	True	NA	11	True	ATTAAA	-31	NA	4263979	4163806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182350_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
WTC11_00037706	chr17	-	7490	25	FSM	ENSG00000185722.18	ENST00000574367.5	5033	25	0	-2457	0	4	multi-exon	FALSE	canonical	3	16	junction_11	26.9825046197634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTGAATAAGTTTCTTG	-4258724	True	NA	1	True	ATTAAA	-21	NA	4263956	4163816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182353_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
WTC11_00037711	chr17	-	4202	7	NNC	ENSG00000132388.13	novel	1514	7	NA	NA	-8	45044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	474.472836126814	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAAGGTGAGTCACTTA	-4348302	False	NA	NA	False	NA	NA	NA	4366683	4224214	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4224243_4269259_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
WTC11_00037712	chr17	-	4209	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	-42	0	42	multi-exon	FALSE	canonical	3	1153	junction_3	71.6184333813579	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGGACTCTTTCTGTA	-4348294	True	NA	0	True	NA	NA	NA	4366675	4269216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
WTC11_00037713	chr17	-	863	4	FSM	ENSG00000132388.13	ENST00000574633.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	619.759272262671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACCAAATAATGCTTT	-4348244	True	NA	NA	False	AATATA	-31	NA	4366625	4272235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4307020_4307124_4366270
WTC11_00037714	chr17	-	984	5	FSM	ENSG00000132388.13	ENST00000571980.1	984	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	549.190028587556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATAGCACAACATGATC	-4348247	True	NA	NA	False	AATGAA	-35	NA	4366628	4272296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4307020_4307124_4366270
WTC11_00037715	chr17	-	548	5	FSM	ENSG00000132388.13	ENST00000571953.5	553	5	5	0	5	0	multi-exon	FALSE	canonical	3	10	junction_4	524.62391291286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAATTTAAAAGAAAAG	NA	False	NA	-5	True	NA	NA	NA	4331918	4282898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4331773
WTC11_00037716	chr17	-	4589	27	NNC	ENSG00000132382.15	novel	4558	26	NA	NA	0	66122	intron_retention	FALSE	non_canonical	0	0	junction_1	151.481930103656	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTGCCAAGCAAAAGAGCA	-4537460	True	NA	NA	False	NA	NA	NA	4555384	4472774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4472806_4538903_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
WTC11_00037717	chr17	-	1926	7	FSM	ENSG00000132382.15	ENST00000571368.5	1995	7	77	-8	77	3	multi-exon	FALSE	canonical	3	697	junction_3	39.8556422884166	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCTTGTACAACAAGAA	-4543210	False	NA	3	True	NA	NA	NA	4543222	4538893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912
WTC11_00037718	chr17	-	4107	27	FSM	ENSG00000132382.15	ENST00000381556.6	4104	27	0	-3	0	3	multi-exon	FALSE	canonical	3	22	junction_1	147.577158637369	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCTTGTACAACAAGAA	-4537462	True	NA	3	True	NA	NA	NA	4555386	4538893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4538976_4539438_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
WTC11_00037719	chr17	-	4558	26	FSM	ENSG00000132382.15	ENST00000254718.9	4558	26	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_19	58.6923368081387	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGGACCTGGTTCTTGT	-4537460	True	NA	-7	True	AATAAA	-36	NA	4555384	4538903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
WTC11_00037720	chr17	-	1950	4	FSM	ENSG00000132382.15	ENST00000574934.5	1941	4	0	-9	0	0	multi-exon	FALSE	canonical	3	697	junction_3	49.948862738694	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-4542410	False	NA	0	True	AATAAA	-43	NA	4542423	4538896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783
WTC11_00037721	chr17	-	746	3	FSM	ENSG00000132382.15	ENST00000574167.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	346.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAAGGCAGGGAAGCC	-4541887	False	NA	NA	False	AAGAAA	-7	NA	4541898	4539438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4541462_4541565_4541783
WTC11_00037726	chr17	-	3471	18	NNC	ENSG00000141456.16	novel	5084	17	NA	NA	0	18405	intron_retention	FALSE	non_canonical	0	0	junction_1	200.3997561968	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-4694195	True	NA	NA	False	NA	NA	NA	4704111	4651368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4651392_4671383_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
WTC11_00037727	chr17	-	5074	17	FSM	ENSG00000141456.16	ENST00000572293.7	5084	17	8	2	0	-2	multi-exon	FALSE	canonical	3	725	junction_9	59.3806576251897	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTTAATAGCTTTTT	-4694213	True	NA	NA	False	ATTAAA	-20	NA	4704129	4669775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
WTC11_00037728	chr17	-	3881	16	FSM	ENSG00000141456.16	ENST00000573523.5	3878	16	0	-3	0	0	multi-exon	FALSE	canonical	3	725	junction_8	61.2337597517361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	-4694195	True	NA	-2	True	AATAAA	-20	NA	4704111	4671384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
WTC11_00037732	chr17	-	484	4	FSM	ENSG00000141456.16	ENST00000570823.5	484	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	391.757010856928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTTGTATTTTCTCCT	-4694213	True	NA	NA	False	NA	NA	NA	4704129	4683033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4683080_4690887_4690994_4691377_4691443_4703862
WTC11_00037735	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	6.24819974072532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-4739699	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
WTC11_00037736	chr17	-	1425	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	243	0	54	multi-exon	FALSE	canonical	3	23	junction_3	6.53834841531101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTAGGCACTGTATA	-4739693	True	NA	NA	False	AATAAA	-18	NA	4739922	4734528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
WTC11_00037737	chr17	-	1529	9	NNC	ENSG00000108528.14	novel	1692	8	NA	NA	0	11895	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422.493176720051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4940016	False	121548	NA	False	AAAAAG	-5	NA	4940030	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925270_4937311_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
WTC11_00037738	chr17	-	861	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14784.2162306818	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4827007	True	NA	NA	False	AAAAAG	-5	NA	4948555	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925267_4945654_4945998_4946627_4946821_4948262
WTC11_00037739	chr17	-	865	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14784.2162306818	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4827007	True	NA	NA	False	AAAAAG	-5	NA	4948555	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925271_4945654_4945998_4946627_4946821_4948262
WTC11_00037740	chr17	-	863	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14784.2162306818	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4827007	True	NA	NA	False	AAAAAG	-5	NA	4948555	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925272_4945657_4945998_4946627_4946821_4948262
WTC11_00037741	chr17	-	863	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14784.2162306818	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4827007	True	NA	NA	False	AAAAAG	-5	NA	4948555	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925269_4945654_4945998_4946627_4946821_4948262
WTC11_00037742	chr17	-	862	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14784.2162306818	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4827007	True	NA	NA	False	AAAAAG	-5	NA	4948555	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925271_4945657_4945998_4946627_4946821_4948262
WTC11_00037743	chr17	-	891	5	NNC	ENSG00000108518.8	novel	807	3	NA	NA	93	20417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15470.0614312775	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAAGATGCCGGGCG	-4948933	False	NA	NA	False	AAAAAG	-5	NA	4948968	4925234	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925269_4945651_4945998_4946627_4946821_4948262_4948556_4948943
WTC11_00037744	chr17	-	2049	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	-303	-794	-303	200	multi-exon	FALSE	canonical	3	66	junction_6	446.065920639041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGGCACTGGAAGCTT	-4940342	False	NA	NA	False	NA	NA	NA	4940356	4936929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
WTC11_00037745	chr17	-	1692	8	FSM	ENSG00000108528.14	ENST00000225665.12	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_5	85.9724683030704	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCCCGGTGTGTTTC	-4940032	False	121548	3	True	TATAAA	-43	NA	4940046	4937129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
WTC11_00037746	chr17	-	2176	6	FSM	ENSG00000108528.14	ENST00000574710.1	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_5	93.9267799937803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCCCCAAATCTGGAG	-4940016	False	121548	-10	True	AATAAA	-13	NA	4940030	4937316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768
WTC11_00037748	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	30661	junction_2	679	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	-4826982	True	NA	-44	True	AATAAA	-18	NA	4948530	4945651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4945998_4946627_4946821_4948262
WTC11_00037749	chr17	-	1173	2	FSM	ENSG00000108518.8	ENST00000574872.1	1173	2	0	0	0	0	multi-exon	FALSE	canonical	3	32019	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	-4947434	False	NA	34	True	AATAAA	-3	NA	4947469	4945666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4945998_4946627
WTC11_00037750	chr17	-	935	4	NIC	ENSG00000108518.8	novel	539	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	841	junction_3	14388.0515552161	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	-4949026	False	NA	34	True	AATAAA	-3	NA	4949061	4945666	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4945998_4946627_4946821_4948262_4948556_4948943
WTC11_00037751	chr17	-	1975	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-1343	0	at_least_one_novel_splicesite	FALSE	canonical	1	1351	junction_3	14147.8168241213	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	-4950393	False	NA	34	True	AATAAA	-3	NA	4950404	4945666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4945998_4946627_4946821_4948262_4948562_4949252
WTC11_00037753	chr17	-	1093	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	1	0	-1	multi-exon	FALSE	canonical	3	898	junction_2	81.958526097045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGGTTTGTTTATAC	-4967778	False	NA	-2	True	AATAAA	-15	NA	4967790	4959226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
WTC11_00037754	chr17	-	1004	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	1	0	-1	multi-exon	FALSE	canonical	3	898	junction_3	77.3809120879016	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGGTTTGTTTATAC	-4954802	True	NA	-2	True	AATAAA	-15	NA	4967817	4959226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
WTC11_00037755	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	366.258295317511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	-4967179	False	NA	-31	True	GGGGCT	-8	NA	4967191	4959255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
WTC11_00037757	chr17	-	495	3	FSM	ENSG00000091640.8	ENST00000573805.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_1	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCCTCCCCGACCAAG	-4967773	False	NA	NA	False	NA	NA	NA	4967785	4960186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4960548_4960785_4960854_4967719
WTC11_00037758	chr17	-	856	2	FSM	ENSG00000108509.21	ENST00000572192.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGGCGCCGCGGGGA	-4969069	False	NA	NA	False	NA	NA	NA	4969081	4968138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906
WTC11_00037759	chr17	-	783	5	FSM	ENSG00000108509.21	ENST00000576872.1	985	5	0	202	0	-202	multi-exon	FALSE	canonical	3	44	junction_3	15.5463018110418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCCTTCTCCCTCAA	NA	False	NA	NA	False	NA	NA	NA	4972793	4969629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768
WTC11_00037760	chr17	-	407	2	FSM	ENSG00000108509.21	ENST00000575192.1	596	2	8	181	8	-181	multi-exon	FALSE	canonical	3	59	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGCAAGAGTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	4977192	4974228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4974501_4977057
WTC11_00037761	chr17	-	1595	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	15	0	-15	multi-exon	FALSE	canonical	3	21	junction_1	35.311313893551	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCTCATTAGAATTTTG	-5109018	True	NA	56	True	NA	NA	NA	5111841	5105555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
WTC11_00037762	chr17	-	1485	4	ISM	ENSG00000167840.13	ENST00000250076.7	2179	5	11250	69	-7	31	3prime_fragment	FALSE	canonical	3	72	junction_3	31.0590834807897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTACTTAGTTCTGC	-5109029	True	NA	25	True	NA	NA	NA	5111852	5105703	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799
WTC11_00037763	chr17	-	1415	5	NNC	ENSG00000167840.13	novel	1553	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	56.2244386365929	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTGTGTCTTTCTTG	-5109029	True	NA	-5	True	CATAAA	-20	NA	5111852	5105733	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_5106534_5108925_5109053_5109477_5109769_5111075_5111220_5111799
WTC11_00037764	chr17	-	1824	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	-271	0	-52	0	multi-exon	FALSE	canonical	3	93	junction_4	21.821720830402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	NA	False	NA	-44	True	NA	NA	NA	5112116	5105772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
WTC11_00037765	chr17	-	2384	5	FSM	ENSG00000167840.13	ENST00000570486.5	2384	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	51.0245039172357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAACCTTTTATATG	-5122908	True	NA	NA	False	NA	NA	NA	5123116	5105928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109869_5111075_5111220_5111799_5112352_5122976
WTC11_00037768	chr17	-	6024	2	FSM	ENSG00000180626.10	ENST00000575779.2	4863	2	13	-1174	7	1174	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTTTTTTACATATAC	-5190348	True	NA	NA	False	NA	NA	NA	5191855	5178360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5184277_5191747
WTC11_00037769	chr17	-	750	2	FSM	ENSG00000180626.10	ENST00000576772.1	757	2	7	0	7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTGGCCAAAACTTCAA	-5190348	True	NA	NA	False	NA	NA	NA	5191855	5183950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5184277_5191431
WTC11_00037770	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	68.6894904170208	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	-5416547	True	NA	-3	True	AATAAA	-17	NA	5419662	5384832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
WTC11_00037771	chr17	-	788	6	FSM	ENSG00000108559.12	ENST00000576862.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	49.0493628908674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGCTCCCAGTTCTCT	-5394956	False	NA	NA	False	NA	NA	NA	5394979	5387083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5387111_5387385_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890
WTC11_00037773	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_4	383.96770697547	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-5347187	True	NA	-25	True	CATAAA	-20	NA	5439155	5432776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
WTC11_00037774	chr17	-	911	2	FSM	ENSG00000108561.8	ENST00000573204.1	911	2	0	0	0	0	multi-exon	FALSE	canonical	3	7522	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGGAGTACATTACTTT	-5434098	False	NA	NA	False	NA	NA	NA	5434110	5433071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5433165_5433292
WTC11_00037776	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	5.39513095453011	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	-5463271	False	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
WTC11_00037777	chr17	-	4170	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	-3	0	3	multi-exon	FALSE	canonical	3	728	junction_2	50.6557005676558	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGGTATTTTTAATTA	-5480609	True	NA	1	True	AATAAA	-28	NA	5486178	5471250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
WTC11_00037779	chr17	-	610	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	-21	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	352.794872726663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	-5480614	True	NA	NA	False	NA	NA	NA	5486183	5474451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
WTC11_00037781	chr17	-	657	7	FSM	ENSG00000072849.11	ENST00000570848.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	367.467307691749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTGGACACTTTTG	-5480609	True	NA	NA	False	NA	NA	NA	5486178	5474609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5474790_5480053_5480145_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
WTC11_00037788	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-5500170	True	NA	-2	True	AATAAA	-23	NA	5501006	5499426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5499951_5500030
WTC11_00037789	chr17	-	4644	19	NNC	ENSG00000198920.11	novel	4647	19	NA	NA	457	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	12.4242147080253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCTACTAGAGCATTGC	-6640184	False	NA	-24	True	AATAAA	-16	NA	6640195	6578154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640115
WTC11_00037791	chr17	-	3259	18	FSM	ENSG00000198920.11	ENST00000572370.5	3263	18	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_15	15.7872972457371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCAGGTTGCTGTTG	-6638471	True	NA	NA	False	NA	NA	NA	6640707	6579388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623606_6623689_6624754_6624862_6628116_6628742_6640636
WTC11_00037795	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.8859335970941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-6649088	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
WTC11_00037796	chr17	-	635	4	FSM	ENSG00000108590.11	ENST00000574128.1	619	4	0	-16	0	0	multi-exon	FALSE	canonical	1	1	junction_3	52.8540968663315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	-6651399	False	NA	-12	True	AATAGA	-31	NA	6651427	6644278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651348
WTC11_00037797	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	67	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	-6649117	True	NA	-12	True	AATAGA	-31	NA	6651634	6644278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6650355_6650434_6651500
WTC11_00037798	chr17	-	620	2	FSM	ENSG00000108590.11	ENST00000575519.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTTTTGTTATCA	-6649058	True	NA	NA	False	AATAGA	-41	NA	6651575	6649888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6650434_6651500
WTC11_00037800	chr17	-	1730	3	FSM	ENSG00000215067.11	ENST00000399540.2	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCC	-7012041	True	NA	NA	False	NA	NA	NA	7012342	7001131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7002621_7009795_7009890_7012195
WTC11_00037802	chr17	-	492	1	FSM	ENSG00000215067.11	ENST00000691305.1	1034	1	667	-125	623	125	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTATGTGCCTTTCAT	-7011658	False	NA	NA	False	ATTAAA	-26	NA	7011673	7011181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7011200_7011700
WTC11_00037803	chr17	-	1896	1	FSM	ENSG00000267532.5	ENST00000572453.1	3838	1	2137	-195	2108	191	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGAAAGCTCTTGAGG	NA	False	NA	NA	False	CATAAA	-18	NA	7017522	7015626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7015600_7017500
WTC11_00037804	chr17	-	1245	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	579	-122	-55	0	3prime_fragment	FALSE	canonical	3	21	junction_5	6.6248689714506	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7177363	False	174	-5	True	AGTAAA	-17	NA	7177537	7173430	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
WTC11_00037805	chr17	-	892	5	FSM	ENSG00000141505.12	ENST00000574330.5	887	5	0	-5	0	0	multi-exon	FALSE	canonical	3	21	junction_4	3.11247489949718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	-7176872	False	NA	NA	False	NA	NA	NA	7177046	7173552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980
WTC11_00037807	chr17	-	3433	20	FSM	ENSG00000132535.22	ENST00000302955.11	3446	20	13	0	13	0	multi-exon	TRUE	canonical	1	1	junction_19	8.27739303507232	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	-7217534	False	NA	NA	False	NA	NA	NA	7217596	7189889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173_7208240_7217117
WTC11_00037808	chr17	-	2001	17	FSM	ENSG00000132535.22	ENST00000650120.1	2001	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.24137417898012	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCATCCGCCCCCGCTC	-7208074	True	NA	NA	False	NA	NA	NA	7208338	7191927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173
WTC11_00037810	chr17	-	3500	15	FSM	ENSG00000004975.12	ENST00000005340.10	2989	15	-511	0	-511	0	multi-exon	FALSE	canonical	3	308	junction_11	39.1543908971984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-7210880	False	NA	-3	True	AATAAA	-18	NA	7235028	7225341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
WTC11_00037811	chr17	-	2659	15	FSM	ENSG00000004975.12	ENST00000575458.5	2659	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	114.39728928571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	-7210170	False	NA	-61	True	NA	NA	NA	7234318	7225454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230138_7230284_7230431_7230727_7230798_7234068
WTC11_00037812	chr17	-	2892	15	NIC	ENSG00000004975.12	novel	2989	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_11	81.5592935682191	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	-7210397	False	NA	-61	True	NA	NA	NA	7234545	7225454	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230057_7230156_7230284_7230431_7230727_7230798_7234068
WTC11_00037813	chr17	-	900	7	FSM	ENSG00000004975.12	ENST00000575086.1	900	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	159.628126872707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAGGCTCAACTGGG	-7229000	False	NA	NA	False	NA	NA	NA	7229035	7226136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227712_7227976_7228045_7228968
WTC11_00037821	chr17	-	2222	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	2	-246	0	237	multi-exon	FALSE	canonical	3	463	junction_4	77.7383431776109	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCGTGCTCCATCGTGG	-7239445	False	24148	NA	False	NA	NA	NA	7239455	7234791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
WTC11_00037822	chr17	-	497	4	FSM	ENSG00000040633.13	ENST00000574407.5	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	262.161527815709	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGATCTGGATGGGCC	-7238567	False	7486	NA	False	NA	NA	NA	7238577	7236518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7236768_7237384_7237478_7237628_7237661_7238454
WTC11_00037823	chr17	-	1305	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	14	0	-14	multi-exon	FALSE	canonical	3	1594	junction_3	182.410404186701	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGTTGCATGTCAC	-7218301	True	NA	NA	False	AGTAAA	-6	NA	7242449	7240021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
WTC11_00037824	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	863.472446964387	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	-7240718	False	24148	5	True	AATAAA	-32	NA	7241819	7240407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
WTC11_00037827	chr17	-	986	8	FSM	ENSG00000175826.12	ENST00000570828.5	986	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	209.606336561018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-7247326	False	NA	-5	True	TTTAAA	-27	NA	7247339	7243590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7243952_7244188_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276
WTC11_00037828	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_4	46.9298216837152	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-7251724	False	NA	-5	True	TTTAAA	-27	NA	7251734	7243590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
WTC11_00037829	chr17	-	808	2	FSM	ENSG00000175826.12	ENST00000570484.1	393	2	108	-523	108	0	multi-exon	FALSE	canonical	3	689	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATTATAACTTTGA	-7244717	False	NA	17	True	NA	NA	NA	7244730	7243617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550
WTC11_00037830	chr17	-	1724	9	FSM	ENSG00000175826.12	ENST00000573600.5	1724	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	205.444031307799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATTATAACTTTGA	-7252031	False	NA	17	True	NA	NA	NA	7252081	7243617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251964
WTC11_00037831	chr17	-	1506	9	FSM	ENSG00000175826.12	ENST00000574205.5	1506	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	213.204713831566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTTTTTTCCTTT	-7251672	False	NA	-15	True	NA	NA	NA	7251682	7243649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7243952_7244101_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
WTC11_00037837	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_3	59.2002252247968	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	-7245196	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
WTC11_00037838	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	507.919961706567	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	-7262612	True	NA	-40	True	AATAAA	-19	NA	7263213	7260136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
WTC11_00037841	chr17	-	4553	6	FSM	ENSG00000006047.13	ENST00000571485.5	4553	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	21.3391658693586	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293378	True	NA	-18	True	AGTAAA	-14	NA	7294589	7288262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092
WTC11_00037842	chr17	-	1654	9	FSM	ENSG00000006047.13	ENST00000007699.10	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	24.7335804120633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293428	True	NA	-18	True	AGTAAA	-14	NA	7294639	7288262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294229
WTC11_00037845	chr17	-	998	3	FSM	ENSG00000132522.16	ENST00000573807.5	823	3	0	-175	0	175	multi-exon	FALSE	canonical	3	783	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATAAGCAGCTGAG	-7313739	False	NA	NA	False	AATACA	-8	NA	7313757	7312483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211
WTC11_00037847	chr17	-	1761	10	FSM	ENSG00000132522.16	ENST00000571569.5	1586	10	0	-175	0	175	multi-exon	FALSE	canonical	3	123	junction_9	236.107058788755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATAAGCAGCTGAG	-7310165	True	NA	NA	False	AATACA	-8	NA	7315328	7312483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315251
WTC11_00037849	chr17	-	1372	10	FSM	ENSG00000132522.16	ENST00000389167.9	1371	10	0	-1	0	0	multi-exon	FALSE	canonical	3	709	junction_7	70.3167436990966	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGCTGCTGTTTGTG	-7310180	True	NA	-4	True	AATAAA	-18	NA	7315343	7312658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
WTC11_00037851	chr17	-	2349	19	FSM	ENSG00000261915.6	ENST00000315601.8	2349	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	381.24719387755	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	7319075	7312660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330_7315656_7316275_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049
WTC11_00037852	chr17	-	1178	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	-2	0	0	multi-exon	FALSE	canonical	3	360	junction_10	161.519070081523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGCTGCTGTTTGTG	-7310197	True	NA	-4	True	AATAAA	-18	NA	7315360	7312658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
WTC11_00037853	chr17	-	1977	8	FSM	ENSG00000132522.16	ENST00000571697.5	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	187.771680723246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCCCAGGCCAATAAA	NA	False	NA	-41	True	NA	NA	NA	7315564	7312695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313292_7313379_7313470_7313567_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315330
WTC11_00037863	chr17	-	5207	29	FSM	ENSG00000215041.10	ENST00000399464.7	5207	29	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_21	20.5328258838259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	-7328963	True	NA	-1	True	AATAAA	-18	NA	7329335	7315627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
WTC11_00037870	chr17	-	2313	5	FSM	ENSG00000187838.17	ENST00000571541.5	2310	5	0	-3	0	0	multi-exon	FALSE	canonical	3	185	junction_3	32.6525267016199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7385954	False	NA	0	True	TATAAA	-26	NA	7394508	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393510_7393600
WTC11_00037871	chr17	-	1752	8	FSM	ENSG00000187838.17	ENST00000619711.5	1752	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	57.3079757244369	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7385971	False	8554	0	True	TATAAA	-26	NA	7394525	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394268_7394476
WTC11_00037872	chr17	-	2059	7	FSM	ENSG00000187838.17	ENST00000573774.5	2056	7	0	-3	0	0	multi-exon	FALSE	canonical	3	98	junction_6	61.0421075069406	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386011	False	NA	0	True	TATAAA	-26	NA	7394565	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7394268_7394476
WTC11_00037873	chr17	-	1689	8	FSM	ENSG00000187838.17	ENST00000324822.15	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	75.4878014202646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386016	False	NA	0	True	TATAAA	-26	NA	7394570	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394160_7394476
WTC11_00037874	chr17	-	1730	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	10	0	10	0	multi-exon	FALSE	canonical	3	36	junction_6	98.2554776533547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386278	False	NA	0	True	TATAAA	-26	NA	7394832	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
WTC11_00037876	chr17	-	2038	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	-6	0	0	multi-exon	FALSE	canonical	3	36	junction_7	75.4878014202646	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386253	False	NA	0	True	TATAAA	-26	NA	7394807	7389726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
WTC11_00037877	chr17	-	1715	6	ISM	ENSG00000187838.17	ENST00000573070.5	1740	7	334	8	0	0	intron_retention	FALSE	canonical	3	54	junction_3	80.0659727974375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAAGATGTATGTAAT	-7385954	False	NA	-8	True	TATAAA	-18	NA	7394508	7389734	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103
WTC11_00037885	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_3	29.5334085777823	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-7395543	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
WTC11_00037886	chr17	-	5901	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	55	0	55	0	multi-exon	FALSE	canonical	2	8	junction_3	18.8325958557674	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-7484047	True	NA	-5	True	AATAAA	-30	NA	7484208	7459365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
WTC11_00037887	chr17	-	5860	4	FSM	ENSG00000174282.12	ENST00000380599.9	5860	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.59966329107444	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCACAGTGGGATG	-7479320	True	NA	-17	True	AATAAA	-18	NA	7479631	7459377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7479455
WTC11_00037888	chr17	-	3164	18	NNC	ENSG00000129245.12	novel	2987	17	NA	NA	-142	38202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.4964587980361	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTTGTCCCTGCCTCC	-7614934	False	NA	NA	False	NA	NA	NA	7615039	7553027	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7553063_7591229_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
WTC11_00037889	chr17	-	923	7	NNC	ENSG00000141504.12	novel	912	6	NA	NA	0	73206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.78224708357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTTGTCCCTGCCTCC	-7623650	True	NA	NA	False	NA	NA	NA	7627796	7553027	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7553065_7626234_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
WTC11_00037890	chr17	-	733	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	0	12	0	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTATCTCATATTTAT	-7584069	False	1646	-1	True	AATAAA	-24	NA	7584086	7581967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582532_7583917
WTC11_00037891	chr17	-	299	2	FSM	ENSG00000233223.4	ENST00000417897.2	371	2	30	42	4	-41	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGTTCGTCACATTTA	-7584051	False	NA	-49	True	CATAAA	-31	NA	7584068	7582015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582164_7583917
WTC11_00037892	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7588448	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7588547_7589143
WTC11_00037893	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	80	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7590055	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7588547_7589143_7589739_7589986
WTC11_00037894	chr17	-	1285	1	FSM	ENSG00000129194.8	ENST00000570788.1	1093	1	-4	-188	-1	188	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAGGCCGAGCTCATT	-7588449	True	NA	NA	False	NA	NA	NA	7590095	7588810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7588800_7590100
WTC11_00037897	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	65.6396221805092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623675	True	NA	-2	True	AATAAA	-20	NA	7627821	7626233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
WTC11_00037899	chr17	-	1048	5	ISM	ENSG00000141504.12	ENST00000269298.10	912	6	16	3	0	0	intron_retention	FALSE	canonical	3	287	junction_3	22.0737400546441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	-7623659	True	NA	-5	True	AATAAA	-17	NA	7627805	7626236	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362
WTC11_00037900	chr17	-	975	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	2	-3	2	0	multi-exon	FALSE	canonical	3	135	junction_5	71.3845921750625	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623721	True	NA	-2	True	AATAAA	-20	NA	7627867	7626233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
WTC11_00037902	chr17	-	762	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	17	-197	0	0	multi-exon	FALSE	canonical	3	80	junction_2	111.126898184013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTAGGGGTGCCTATCC	-7623713	True	NA	-105	True	NA	NA	NA	7627859	7626336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
WTC11_00037907	chr17	-	3233	11	NNC	ENSG00000141510.18	novel	2579	11	NA	NA	-140	639	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	88.5778753414192	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCATGCTCCTCAG	-7671628	False	129	NA	False	NA	NA	NA	7677574	7667762	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7677397
WTC11_00037908	chr17	-	3161	11	FSM	ENSG00000141510.18	ENST00000269305.9	2512	11	9	-658	0	639	multi-exon	FALSE	canonical	3	196	junction_10	44.8245468465661	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCATGCTCCTCAG	-7681535	True	NA	NA	False	NA	NA	NA	7687481	7667762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
WTC11_00037909	chr17	-	2268	7	FSM	ENSG00000141510.18	ENST00000504937.5	2271	7	3	0	3	0	multi-exon	FALSE	canonical	3	270	junction_5	28.2218394549721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7675466	False	NA	7	True	AATAAA	-32	NA	7675490	7668401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052
WTC11_00037910	chr17	-	2283	8	FSM	ENSG00000141510.18	ENST00000510385.5	2404	8	121	0	121	0	multi-exon	FALSE	canonical	2	3	junction_2	145.317105753211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7675348	False	NA	7	True	AATAAA	-32	NA	7675372	7668401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673206_7673340_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052
WTC11_00037911	chr17	-	2655	12	FSM	ENSG00000141510.18	ENST00000420246.6	2653	12	0	-2	0	0	multi-exon	FALSE	canonical	2	3	junction_2	120.923580813232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7681535	True	NA	7	True	AATAAA	-32	NA	7687481	7668401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673206_7673340_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
WTC11_00037913	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	125.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855405	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7857014_7857199_7857382
WTC11_00037914	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855408	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7856984_7857199_7857382
WTC11_00037915	chr17	-	999	2	FSM	ENSG00000183011.14	ENST00000333775.9	999	2	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7857841	False	NA	-4	True	ATTAAA	-13	NA	7857854	7856684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7857014
WTC11_00037917	chr17	-	712	2	FSM	ENSG00000170049.10	ENST00000572275.1	859	2	147	0	147	0	multi-exon	FALSE	canonical	3	26	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTCATCAAAGGGTAA	-7923672	False	NA	NA	False	AAGAAA	-29	NA	7923695	7922707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7923180_7923455
WTC11_00037918	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	26.2339898266013	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	-7919485	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
WTC11_00037919	chr17	-	646	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	2	0	-1	multi-exon	FALSE	canonical	3	44	junction_2	546.798561324613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGCCTGAGCGTGTTGG	-7919501	True	NA	-8	True	AATAAA	-15	NA	7931962	7930349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
WTC11_00037920	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	604	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	-7919460	True	NA	NA	False	NA	NA	NA	7931921	7930503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931730
WTC11_00037921	chr17	-	755	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	4	0	0	multi-exon	FALSE	canonical	3	147	junction_4	465.898594116788	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	-7931976	False	NA	-7	True	AATAAA	-16	NA	7931999	7930348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
WTC11_00037923	chr17	-	4673	24	NNC	ENSG00000179094.16	novel	4676	23	NA	NA	0	42234	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.845168008208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACCAAAAGTATA	-8150891	True	NA	NA	False	NA	NA	NA	8152383	8098237	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8098257_8140472_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
WTC11_00037924	chr17	-	4675	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	1	0	-1	multi-exon	FALSE	canonical	3	64	junction_22	12.1638266053882	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGACTTTGTGGAATGAA	-8150912	True	NA	-9	True	GATAAA	-6	NA	8152404	8140472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
WTC11_00037925	chr17	-	512	2	FSM	ENSG00000179094.16	ENST00000583677.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGCAGTGGTGAGGGAG	NA	False	NA	NA	False	GGGGCT	-43	NA	8142191	8141215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8141341_8141804
WTC11_00037930	chr17	-	2128	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	-2	0	2	multi-exon	FALSE	canonical	3	143	junction_4	36.0104151600617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTAAGATCTTTTTT	-8161626	True	NA	0	True	AATAAA	-20	NA	8162948	8159146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
WTC11_00037931	chr17	-	2733	4	FSM	ENSG00000220205.9	ENST00000404970.3	1479	4	0	-1254	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	104.680466181614	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTTGTCTAAGATCT	-8163286	True	NA	-5	True	AATAAA	-15	NA	8163546	8159151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8163466
WTC11_00037932	chr17	-	3346	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	-617	-2172	-19	2	multi-exon	FALSE	canonical	3	143	junction_3	37.3214266727424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTAAGATCTTTTTT	-8163305	True	NA	0	True	AATAAA	-20	NA	8163565	8159146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
WTC11_00037933	chr17	-	2310	5	FSM	ENSG00000179029.15	ENST00000437139.7	2263	5	-30	-17	-11	17	multi-exon	TRUE	canonical	3	51	junction_3	1.6583123951777	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTGTGTCAGTTACT	-8175415	True	NA	-26	True	AATAAA	-14	NA	8176410	8172439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8174519_8174617_8175756_8175858_8175958_8176027_8176199
WTC11_00037934	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	-8175378	True	NA	-25	True	AATACA	-3	NA	8176373	8173236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8176199
WTC11_00037935	chr17	-	459	3	FSM	ENSG00000179029.15	ENST00000431792.2	455	3	0	-4	0	0	multi-exon	FALSE	canonical	3	9	junction_1	21	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-8175321	False	NA	-10	True	AATAAA	-19	NA	8176316	8173998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8175958_8176027_8176199
WTC11_00037936	chr17	-	758	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	-2	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.536824204563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-8175404	True	NA	-10	True	AATAAA	-19	NA	8176399	8173998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
WTC11_00037939	chr17	-	1253	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	-10	0	9	multi-exon	TRUE	canonical	3	770	junction_8	125.652298029125	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTAGGTGGAGGCTTT	-8190797	True	NA	2	True	AATAAA	-32	NA	8210575	8204723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
WTC11_00037940	chr17	-	1263	9	FSM	ENSG00000178999.13	ENST00000316199.10	1254	9	0	-9	0	9	multi-exon	FALSE	canonical	3	54	junction_5	346.367376314514	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTAGGTGGAGGCTTT	-8190804	True	NA	2	True	AATAAA	-32	NA	8210582	8204723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207371_8207570_8207626_8207737_8207841_8210176_8210250_8210529
WTC11_00037941	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	370.090667324666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190803	True	NA	-17	True	AATAAA	-13	NA	8210581	8204742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
WTC11_00037942	chr17	-	939	8	FSM	ENSG00000178999.13	ENST00000578549.5	939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	374.982557417471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCCTGTCATTCACTCG	-8190446	False	19778	NA	False	NA	NA	NA	8210224	8204870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176
WTC11_00037947	chr17	-	7031	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	4	4	4	-4	multi-exon	TRUE	canonical	3	82	junction_4	17.5854466501223	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTTCTTGGTTA	-8245672	True	NA	-4	True	AATAAA	-18	NA	8248052	8224818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
WTC11_00037952	chr17	-	1928	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	12	0	12	0	multi-exon	FALSE	canonical	3	16	junction_2	2.77263412660235	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-8294944	True	NA	2	True	TATAAA	-17	NA	8295388	8290060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
WTC11_00037953	chr17	-	870	4	FSM	ENSG00000161970.15	ENST00000584164.6	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_3	6059.16189657356	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTTTGTGTGTGGT	-8221705	True	NA	90	True	AATAAA	-43	NA	8383164	8377520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382780
WTC11_00037954	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	9272	junction_3	2286.31406416529	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-8221734	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
WTC11_00037956	chr17	-	784	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	2	-23	0	0	multi-exon	FALSE	canonical	3	639	junction_3	6195.7682511713	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGTGTTTTGTGT	-8221705	True	NA	85	True	AATAAA	-38	NA	8383164	8377525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
WTC11_00037957	chr17	-	2594	3	FSM	ENSG00000161970.15	ENST00000578812.5	1002	3	27	-1619	0	0	multi-exon	FALSE	canonical	3	9272	junction_2	2796	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGTGTTTTGTGT	-8221707	True	NA	85	True	AATAAA	-38	NA	8383166	8377525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8379937_8382142_8382316_8383156
WTC11_00037958	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	6373.85688226176	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	-8382963	False	NA	-68	True	NA	NA	NA	8383009	8377678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
WTC11_00037959	chr17	-	576	2	FSM	ENSG00000161970.15	ENST00000578115.1	569	2	0	-7	0	7	multi-exon	FALSE	canonical	3	9272	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTTTAGTAGAGGC	-8221734	True	NA	NA	False	NA	NA	NA	8383193	8381776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8382316_8383156
WTC11_00037960	chr17	-	7667	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	-5	0	0	multi-exon	TRUE	canonical	3	658	junction_36	158.909012881586	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-8611398	True	NA	-2	True	AATAAA	-38	NA	8630761	8474206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
WTC11_00037961	chr17	-	7694	42	FSM	ENSG00000133026.14	ENST00000379980.8	7694	42	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_36	252.555342590077	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-8611398	True	NA	-2	True	AATAAA	-38	NA	8630761	8474206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
WTC11_00037962	chr17	-	7741	42	NIC	ENSG00000133026.14	novel	7809	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_41	232.686595563448	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-8611398	True	NA	-2	True	AATAAA	-38	NA	8630761	8474206	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
WTC11_00037967	chr17	-	732	6	ISM	ENSG00000133026.14	ENST00000692526.1	7809	43	90	103091	4	1153	5prime_fragment	FALSE	canonical	3	122	junction_5	380.2067858416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGTTATTCAGTACC	-8611354	True	NA	NA	False	NA	NA	NA	8630717	8577305	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
WTC11_00037968	chr17	-	1091	4	ISM	ENSG00000133026.14	ENST00000685736.1	2417	6	60	25940	11	-25940	5prime_fragment	FALSE	canonical	3	122	junction_3	364.242593152787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTGTTAAGTTGGTTG	-8611347	True	NA	-19	True	AATAAA	-9	NA	8630710	8604398	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_8604983_8622901_8623278_8623423_8623498_8630653
WTC11_00037969	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	NA	False	NA	49	True	AATACA	-19	NA	8799365	8797109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8797100_8799400
WTC11_00037970	chr17	-	2743	9	ISM	ENSG00000141506.15	ENST00000581552.5	3253	19	24841	-1180	-406	0	3prime_fragment	FALSE	canonical	3	12	junction_7	7.45716936913733	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	-8887660	False	NA	-6	True	AATAAA	-18	NA	8887676	8878915	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520
WTC11_00037971	chr17	-	677	4	FSM	ENSG00000141506.15	ENST00000583810.5	1126	4	449	0	-190	0	multi-exon	FALSE	canonical	3	24	junction_2	6.64997911442	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCCCTCTCTGTGGAG	-8882043	False	NA	NA	False	NA	NA	NA	8882059	8880577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787
WTC11_00037973	chr17	-	1303	6	ISM	ENSG00000141506.15	ENST00000584803.1	2653	18	6633	7531	6633	468	internal_fragment	FALSE	canonical	3	20	junction_5	4.63033476111609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCCGTAATGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	8904874	8888169	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776
WTC11_00037974	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	46.3645712736326	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571083	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
WTC11_00037975	chr17	-	639	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	-1	0	0	multi-exon	FALSE	canonical	3	69	junction_4	173.097198128681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571098	True	NA	-1	True	AATAAA	-18	NA	9575835	9250470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
WTC11_00037976	chr17	-	747	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	-16	0	0	multi-exon	FALSE	canonical	3	9	junction_6	190.720927593755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571100	True	NA	-1	True	AATAAA	-18	NA	9575837	9250470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
WTC11_00037977	chr17	-	2014	1	FSM	ENSG00000271851.1	ENST00000607496.1	2374	1	324	36	324	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCCTGGCAAGAATAAA	NA	False	NA	-36	True	AAAAAG	-5	NA	9555372	9553358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9553400_9555400
WTC11_00037978	chr17	-	8517	14	FSM	ENSG00000007237.19	ENST00000432992.7	8269	14	-270	22	-270	-19	multi-exon	TRUE	canonical	3	15	junction_9	3.92232270276368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTTTTCAGGAAGTTA	-10198528	True	NA	23	True	TTTAAA	-43	NA	10198876	9910627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201_9959256_9969676_9969763_9981803_9981885_10019776_10019898_10198207
WTC11_00037979	chr17	-	498	5	FSM	ENSG00000125414.19	ENST00000578017.5	572	5	74	0	74	0	multi-exon	FALSE	canonical	2	5	junction_2	3.08220700148449	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGCCAAGACCGTGAGGAA	-10547500	False	NA	NA	False	NA	NA	NA	10547618	10543749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474
WTC11_00037980	chr17	-	1738	7	NNC	ENSG00000133028.12	novel	9577	6	NA	NA	0	19864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.94413345738	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGCAGACCATCTTAGT	-10688732	True	NA	NA	False	NA	NA	NA	10697527	10652609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10652640_10680336_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
WTC11_00037981	chr17	-	490	1	FSM	ENSG00000261433.1	ENST00000569543.1	541	1	54	-3	54	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGCTGCGTCTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	10659028	10658538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10658500_10659000
WTC11_00037982	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	28.5685141370706	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-10688738	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
WTC11_00037984	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	7.95989949685296	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-10729637	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
WTC11_00037985	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.6450540489952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-10729637	True	NA	NA	False	NA	NA	NA	10730023	10714675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
WTC11_00037987	chr17	-	677	2	NNC	ENSG00000264016.3	novel	750	2	NA	NA	13942	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	76	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCATGCATCTTTGGAT	-10754968	True	NA	-10	True	AATAAA	-17	NA	10755047	10741264	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10741724_10754829
WTC11_00037989	chr17	-	4228	7	NNC	ENSG00000154957.14	novel	2295	7	NA	NA	-932	19558	intron_retention	FALSE	canonical	1	1	junction_1	40.6997815991956	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGATCTTGTGTACCAT	-11993046	False	NA	NA	False	NA	NA	NA	11993849	11957880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_11958730_11977247_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442
WTC11_00037991	chr17	-	2274	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	-13	0	0	multi-exon	FALSE	canonical	3	24	junction_6	35.0780874937934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-11996654	True	NA	-1	True	AATAAA	-26	NA	11997457	11977438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
WTC11_00037992	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	33.6633661748528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-11996672	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
WTC11_00037994	chr17	-	222	1	FSM	ENSG00000277621.1	ENST00000617898.1	390	1	182	-14	182	14	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTCCTGAGTACAGGG	NA	False	NA	NA	False	AATAAA	-32	NA	12982820	12982598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12982600_12982800
WTC11_00037995	chr17	-	3767	24	FSM	ENSG00000006744.19	ENST00000338034.9	3767	24	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_21	59.6112167671592	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACAACGATTTGTAC	-13005680	True	NA	-8	True	AATAAA	-19	NA	13018027	12991611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
WTC11_00037997	chr17	-	3738	22	FSM	ENSG00000006744.19	ENST00000484122.5	3738	22	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_20	60.1368054867372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-13005281	False	152	-6	True	AATAAA	-15	NA	13017628	12992390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070
WTC11_00038003	chr17	-	4221	2	FSM	ENSG00000153976.3	ENST00000284110.2	4186	2	10	-45	10	45	multi-exon	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGACTATGGAAAACACC	-13601144	True	NA	NA	False	TTTAAA	-4	NA	13601919	13493986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_13496819_13600530
WTC11_00038004	chr17	-	5953	2	FSM	ENSG00000236088.11	ENST00000661551.1	5962	2	24	-15	7	15	multi-exon	FALSE	canonical	3	52	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTTCTGTTTG	-14068047	True	NA	NA	False	AATATA	-25	NA	14069468	14028660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14034417_14069271
WTC11_00038006	chr17	-	2868	3	FSM	ENSG00000236088.11	ENST00000664394.1	2883	3	15	0	7	0	multi-exon	FALSE	canonical	2	6	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAGTTGAATCATTTAA	-14068047	True	NA	NA	False	NA	NA	NA	14069468	14028765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14030572_14033551_14034417_14069271
WTC11_00038007	chr17	-	2276	3	FSM	ENSG00000236088.11	ENST00000660804.1	2291	3	15	0	7	0	multi-exon	FALSE	canonical	2	5	junction_1	23.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTGAAATATACTTTAT	-14068047	True	NA	NA	False	NA	NA	NA	14069468	14028901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14030572_14034007_14034417_14069271
WTC11_00038009	chr17	-	278	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	-42	223	-42	-223	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGACTGGTTTTTGAACA	-14705535	True	NA	NA	False	NA	NA	NA	14705576	14705298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14705300_14705600
WTC11_00038010	chr17	-	2298	3	NNC	ENSG00000239704.11	novel	632	3	NA	NA	10793	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	46	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	NA	False	NA	-11	True	AATAAA	-15	NA	15441827	15436020	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_15438201_15440207_15440286_15441787
WTC11_00038011	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.2213327816037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562266	True	NA	-11	True	AATAAA	-15	NA	15563561	15436020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
WTC11_00038012	chr17	-	2983	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	99.1101222203394	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562287	True	NA	-11	True	AATAAA	-15	NA	15563582	15436020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15438201_15440207_15440286_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
WTC11_00038016	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3713650416969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	-15562249	True	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
WTC11_00038017	chr17	-	3006	7	FSM	ENSG00000175106.17	ENST00000584811.5	2989	7	0	-17	0	17	multi-exon	FALSE	non_canonical	0	0	junction_1	106.44208127741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTAACCCTCATGATAAA	-15562133	True	NA	NA	False	TATAAA	-38	NA	15563428	15536962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15538154_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15562192
WTC11_00038022	chr17	-	1872	5	FSM	ENSG00000221926.13	ENST00000577886.5	1979	5	110	-3	78	3	multi-exon	FALSE	canonical	3	49	junction_1	2.44948974278318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGATACCGTTCTTATG	-15642810	False	NA	-6	True	AATAAA	-25	NA	15642854	15627956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720
WTC11_00038023	chr17	-	2668	6	ISM	ENSG00000221926.13	ENST00000336708.11	2900	9	30955	-10	-8649	3	3prime_fragment	FALSE	canonical	2	9	junction_5	16.9422548676379	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGATACCGTTCTTATG	NA	False	NA	-6	True	AATAAA	-25	NA	15651924	15627956	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090
WTC11_00038024	chr17	-	811	8	FSM	ENSG00000221926.13	ENST00000460728.5	793	8	0	-18	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.92599962960761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCCAGGCCAATGTGAT	-15683041	True	NA	NA	False	NA	NA	NA	15684283	15636203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
WTC11_00038027	chr17	-	1011	1	FSM	ENSG00000233966.1	ENST00000450587.1	669	1	-176	-166	-176	166	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAATAATAAGAGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	15705076	15704065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15704100_15705100
WTC11_00038028	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	246.720200111092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994776	True	NA	0	True	GATAAA	-32	NA	15999650	15976559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
WTC11_00038029	chr17	-	2478	5	FSM	ENSG00000214941.8	ENST00000399277.6	2020	5	0	-458	0	458	multi-exon	FALSE	canonical	3	335	junction_4	101.521857252515	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTTTTTTTTTTT	-15994830	True	NA	NA	False	NA	NA	NA	15999704	15976101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
WTC11_00038030	chr17	-	721	8	FSM	ENSG00000214941.8	ENST00000497719.5	721	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	258.60323403442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAAATAGATGACAGA	-15994839	True	NA	NA	False	NA	NA	NA	15999713	15977011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
WTC11_00038031	chr17	-	677	5	FSM	ENSG00000214941.8	ENST00000584519.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	230.323685277915	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	-15994762	True	NA	44	True	NA	NA	NA	15999636	15977682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15999518
WTC11_00038033	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	173.724609655627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994765	True	NA	0	True	AATAAA	-28	NA	15999639	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
WTC11_00038034	chr17	-	561	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	-3	0	0	multi-exon	FALSE	canonical	3	33	junction_5	207.269486418045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994809	True	NA	0	True	AATAAA	-28	NA	15999683	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
WTC11_00038035	chr17	-	2313	6	FSM	ENSG00000214941.8	ENST00000472495.5	703	6	15	-1625	0	458	multi-exon	FALSE	canonical	3	335	junction_5	99.4263546550913	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTTTTTTTTTTT	-15994795	True	NA	NA	False	NA	NA	NA	15999669	15976101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
WTC11_00038036	chr17	-	723	6	FSM	ENSG00000214941.8	ENST00000460315.5	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	195.502838854069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994814	True	NA	0	True	AATAAA	-28	NA	15999688	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
WTC11_00038037	chr17	-	879	5	FSM	ENSG00000214941.8	ENST00000491631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	193.040151263927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994843	True	NA	0	True	AATAAA	-28	NA	15999717	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
WTC11_00038038	chr17	-	924	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	-6	0	0	multi-exon	FALSE	canonical	3	67	junction_3	237.408845665026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994795	True	NA	0	True	AATAAA	-28	NA	15999669	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
WTC11_00038041	chr17	-	10705	46	FSM	ENSG00000141027.22	ENST00000268712.8	10705	46	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_27	52.9941529502414	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAGTAACCCCTGCAG	-16201100	True	NA	-49	True	AATAAA	-24	NA	16215534	16029156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101758_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00038042	chr17	-	1872	7	NIC	ENSG00000141027.22	novel	7950	45	NA	NA	158	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	103.61091748567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	-16057547	False	NA	-13	True	AATAAA	-20	NA	16057565	16031403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048986_16057513
WTC11_00038043	chr17	-	7950	45	FSM	ENSG00000141027.22	ENST00000395851.5	7950	45	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	56.1369847223647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	-16194581	True	NA	-13	True	AATAAA	-20	NA	16194613	16031403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061757_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461
WTC11_00038044	chr17	-	8731	48	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	68	junction_25	53.605900569118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGTGGTTTAAGGCT	-16201114	True	NA	-3	True	AATAAA	-30	NA	16215548	16031393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16087171_16087346_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00038045	chr17	-	559	4	FSM	ENSG00000141027.22	ENST00000582565.1	672	4	113	0	113	0	multi-exon	FALSE	canonical	3	261	junction_3	22.2311093340441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACCAACACCGATTGCA	-16040530	False	NA	NA	False	NA	NA	NA	16040546	16032432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440
WTC11_00038052	chr17	-	1969	17	FSM	ENSG00000141027.22	ENST00000436828.5	1969	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	94.3329997601582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16201096	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
WTC11_00038056	chr17	-	571	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	-17	0	17	multi-exon	FALSE	canonical	3	1797	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTACTGTGATTT	-16344731	False	NA	-2	True	AATAAA	-37	NA	16344742	16342516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596
WTC11_00038057	chr17	-	1787	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	-17	0	17	multi-exon	FALSE	canonical	3	436	junction_3	603.018449137338	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTACTGTGATTT	-16339511	True	NA	-2	True	AATAAA	-37	NA	16353456	16342516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
WTC11_00038058	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1355	junction_3	208.367913796726	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339524	True	NA	-22	True	AATAAA	-17	NA	16353469	16342536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
WTC11_00038062	chr17	-	3026	3	FSM	ENSG00000181350.12	ENST00000409887.3	3157	3	131	0	131	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAAACTCAAGAATG	NA	False	NA	-100	True	AATACA	-31	NA	16448163	16441576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16444132_16446879_16447032_16447844
WTC11_00038065	chr17	-	7336	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	303	0	-303	multi-exon	FALSE	canonical	3	42	junction_4	9.92773891679269	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGCCCTCCTTTCCCA	-16568530	True	NA	NA	False	NA	NA	NA	16569204	16547256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
WTC11_00038068	chr17	-	353	1	FSM	ENSG00000235554.1	ENST00000414124.1	1034	1	459	222	459	-222	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGAAGCAGGTCTCGGTC	NA	False	NA	NA	False	GGGGCT	-45	NA	16617422	16617069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16617100_16617400
WTC11_00038070	chr17	-	601	1	FSM	ENSG00000226478.3	ENST00000413731.1	1126	1	1040	-515	1040	515	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAGGAATATTTATCAG	NA	False	NA	NA	False	NA	NA	NA	16745721	16745120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16745100_16745700
WTC11_00038071	chr17	-	544	2	Genic_Genomic	ENSG00000226478.3	novel	1126	1	NA	NA	0	-475	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCAGTCGTAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	16746761	16746110	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_16746547_16746653
WTC11_00038072	chr17	-	2583	2	FSM	ENSG00000179598.6	ENST00000321560.4	2578	2	0	-5	0	5	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGGTGTCTTTGCCTT	-17205984	True	NA	0	True	AATAAA	-24	NA	17206333	17200989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17203099_17205859
WTC11_00038073	chr17	-	3667	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.099236577363	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTACATGGTTTTAT	-17233822	True	NA	-14	True	AATAAA	-17	NA	17237168	17212211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
WTC11_00038074	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	3.60272006083385	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	-17233793	True	NA	-9	True	AATAAA	-14	NA	17237139	17221170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
WTC11_00038076	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	664	junction_11	72.2685533385918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-17272636	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
WTC11_00038078	chr17	-	1335	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	5	-29	combination_of_known_junctions	FALSE	canonical	2	141	junction_6	187.801384446441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTCGTGGATTTAT	-17272624	True	NA	-33	True	AAGAAA	-22	NA	17281234	17246902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
WTC11_00038088	chr17	-	739	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	-51	-52	-51	52	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTACATACAGCTTTCCA	-17384010	True	NA	NA	False	AATAAA	-28	NA	17384063	17383324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17383300_17384100
WTC11_00038089	chr17	-	2960	2	FSM	ENSG00000108551.5	ENST00000225688.4	1748	2	0	-1212	0	1212	multi-exon	FALSE	canonical	3	23	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCCTGAGACAGCAGAGC	-17495963	True	NA	NA	False	AAAAAG	-5	NA	17496395	17493224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17495685_17495895
WTC11_00038090	chr17	-	744	5	FSM	ENSG00000133027.18	ENST00000490392.5	673	5	-75	4	-75	-1	multi-exon	FALSE	canonical	2	31	junction_4	240.268079444607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATCTGCTCCAGCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	17519155	17505566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17519026
WTC11_00038091	chr17	-	1028	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	-7	0	7	multi-exon	FALSE	canonical	3	504	junction_6	31.0733898304571	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCCTCTGTCTGTCTGT	-17587583	True	NA	0	True	AATAAA	-24	NA	17591708	17505555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
WTC11_00038092	chr17	-	1048	8	FSM	ENSG00000133027.18	ENST00000395781.6	1050	8	0	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	249.277486560906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATCTGCTCCAGCCTC	-17587583	True	NA	-11	True	AATAAA	-13	NA	17591708	17505566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17507168_17507200_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
WTC11_00038093	chr17	-	662	6	FSM	ENSG00000133027.18	ENST00000421096.5	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	217.41812251972	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAACTGCTGTCGGCCTC	-17587525	True	NA	NA	False	NA	NA	NA	17591650	17508783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17508844_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
WTC11_00038094	chr17	-	473	4	FSM	ENSG00000133027.18	ENST00000472446.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	243.8815741753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACCAGGCTTGCCAC	-17587578	True	NA	NA	False	NA	NA	NA	17591703	17509433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17509546_17512508_17512655_17576919_17577028_17591596
WTC11_00038095	chr17	-	4901	19	FSM	ENSG00000072310.18	ENST00000261646.11	4901	19	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_12	28.0354713589943	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	-17830219	True	NA	76	True	AATAAA	-31	NA	17836986	17811333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17836726
WTC11_00038096	chr17	-	3026	14	FSM	ENSG00000072310.18	ENST00000395756.5	3026	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	67.1638462904017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	-17818234	False	NA	-2	True	ATTAAA	-22	NA	17818327	17812072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817547_17817917_17818259
WTC11_00038099	chr17	-	4253	20	FSM	ENSG00000072310.18	ENST00000355815.8	4253	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_19	82.0282364734691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	-17830220	True	NA	-2	True	ATTAAA	-22	NA	17836987	17812072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17823517_17823608_17836726
WTC11_00038104	chr17	-	695	2	FSM	ENSG00000072310.18	ENST00000581707.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGGGCAGCTCTGCAC	-17815280	False	NA	NA	False	NA	NA	NA	17815373	17814402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17814945_17815220
WTC11_00038113	chr17	-	4274	2	FSM	ENSG00000175662.18	ENST00000577794.1	577	2	38	-3735	38	-88	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCACTGGCCCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	17848911	17843598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822
WTC11_00038114	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.76166666071399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-17971858	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
WTC11_00038116	chr17	-	1455	4	NIC	ENSG00000171953.16	novel	1737	6	NA	NA	13	-11	intron_retention	FALSE	canonical	0	0	junction_2	107.011941182073	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTGTCTCTCTTGGT	NA	False	NA	NA	False	AATAAA	-6	NA	18024658	18015069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18016261_18021122_18021239_18021744_18021858_18024623
WTC11_00038117	chr17	-	1562	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_2	83.3884443616814	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTTGTTTCTATTTG	-18035247	True	NA	0	True	NA	NA	NA	18039168	18018011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
WTC11_00038118	chr17	-	980	3	FSM	ENSG00000171953.16	ENST00000497871.1	633	3	5	-352	5	212	multi-exon	FALSE	canonical	3	224	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGATCCACTGGAGGC	-18035275	True	NA	NA	False	AGTAAA	-11	NA	18039196	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18028378_18028614_18028660_18038880
WTC11_00038119	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_19	144.883084604513	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-18244433	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
WTC11_00038121	chr17	-	700	4	FSM	ENSG00000177731.16	ENST00000487369.5	522	4	-56	-122	0	-57	multi-exon	FALSE	canonical	3	992	junction_2	86.6063892947089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTGAGGAAGAGGAAGG	-18246052	False	NA	NA	False	NA	NA	NA	18246062	18245115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18245273_18245353_18245661_18245743_18245851_18245933
WTC11_00038136	chr17	-	6595	19	FSM	ENSG00000177302.15	ENST00000321105.10	6596	19	0	1	0	-1	multi-exon	FALSE	canonical	3	112	junction_4	15.6627260607571	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTGGAATTTCTAAGT	-18309591	True	NA	-5	True	ATTAAA	-15	NA	18314994	18271428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
WTC11_00038138	chr17	-	2519	13	NNC	ENSG00000176974.21	novel	2527	12	NA	NA	0	52515	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.814602310584	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCAGCCTTATCGTC	-18357280	True	NA	NA	False	NA	NA	NA	18363518	18275344	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_18275371_18327874_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
WTC11_00038142	chr17	-	2656	7	FSM	ENSG00000176974.21	ENST00000395684.5	2652	7	9	-13	9	0	multi-exon	FALSE	canonical	3	222	junction_4	91.1349731625205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGGCATTGACTCT	-18341631	False	NA	5	True	AATAAA	-32	NA	18341646	18327859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731
WTC11_00038143	chr17	-	2540	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	-13	0	0	multi-exon	FALSE	canonical	3	222	junction_4	69.910095748778	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGGCATTGACTCT	-18357312	True	NA	5	True	AATAAA	-32	NA	18363550	18327859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
WTC11_00038145	chr17	-	2462	12	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	151.030455031783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTGGCATTGACTC	-18357213	True	NA	4	True	AATAAA	-31	NA	18363451	18327860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
WTC11_00038146	chr17	-	1583	10	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACTTGGTCATAATCAT	-18357209	True	NA	-6	True	AATAAA	-10	NA	18363447	18328473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
WTC11_00038147	chr17	-	1723	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	-67	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	86.234621817458	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357280	True	NA	-9	True	ATTAAA	-12	NA	18363518	18328527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
WTC11_00038148	chr17	-	2756	1	FSM	ENSG00000176974.21	ENST00000582352.1	2756	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCAGGTGGTTCT	-18333427	False	NA	NA	False	NA	NA	NA	18333439	18330683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18330700_18333400
WTC11_00038149	chr17	-	332	3	FSM	ENSG00000176974.21	ENST00000583780.1	332	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGCCAGTCAACGGGGC	-18357304	True	NA	NA	False	NA	NA	NA	18363542	18355978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18356001_18360413_18360553_18363371
WTC11_00038150	chr17	-	5109	3	FSM	ENSG00000249459.11	ENST00000668878.2	1612	3	0	-3497	0	-11	multi-exon	FALSE	canonical	2	2	junction_1	16	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCAGAAACTTTTGTAA	-18680839	False	NA	-8	True	AATAAA	-16	NA	18681846	18658439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18663228_18680740_18680830_18681614
WTC11_00038151	chr17	-	5145	4	FSM	ENSG00000249459.11	ENST00000285274.9	5145	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.8548533034381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTTCTTTTAA	-18681221	True	NA	3	True	AATAAA	-27	NA	18682228	18658428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18663228_18680740_18680830_18681614_18681847_18682203
WTC11_00038152	chr17	-	10336	3	ISM	ENSG00000240445.6	ENST00000395675.7	5859	4	127	-4247	54	4247	3prime_fragment	FALSE	canonical	3	29	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTCCTGGATAGGATG	-18681180	True	NA	88	True	NA	NA	NA	18682187	18663381	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18673056_18680740_18680830_18681614
WTC11_00038154	chr17	-	491	2	FSM	ENSG00000240445.6	ENST00000442380.2	564	2	0	73	0	48	multi-exon	FALSE	canonical	3	33	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAAATGTTAACTTC	-18681234	True	NA	NA	False	NA	NA	NA	18682241	18681393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18681847_18682203
WTC11_00038156	chr17	-	5316	7	NNC	ENSG00000188522.15	novel	5226	6	NA	NA	-65	37160	intron_retention	FALSE	non_canonical	0	0	junction_1	39.2955326836129	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGATATTAGACCCT	-19003674	True	NA	NA	False	NA	NA	NA	19004829	18931628	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_18931654_18968788_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
WTC11_00038157	chr17	-	5317	7	NNC	ENSG00000188522.15	novel	5226	6	NA	NA	-65	37160	intron_retention	FALSE	non_canonical	0	0	junction_1	39.2955326836129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGATATTAGACCCT	-19003674	True	NA	NA	False	NA	NA	NA	19004829	18931628	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_18931655_18968788_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
WTC11_00038158	chr17	-	5297	6	FSM	ENSG00000188522.15	ENST00000388995.11	5226	6	-71	0	-71	0	multi-exon	FALSE	canonical	3	82	junction_3	15.6767343538123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	-19003680	True	NA	0	True	AATAAA	-30	NA	19004835	18968788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
WTC11_00038159	chr17	-	2531	3	FSM	ENSG00000188522.15	ENST00000399096.2	4393	3	0	1862	0	-641	multi-exon	FALSE	canonical	3	82	junction_1	12	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCACACCAGGGGTCAC	-19002625	False	NA	NA	False	NA	NA	NA	19003780	18977571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18979674_18988246_18988415_19003519
WTC11_00038161	chr17	-	938	1	FSM	ENSG00000262202.4	ENST00000573866.2	637	1	12	-313	12	313	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGTCTGTGTATTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	19112624	19111686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19111700_19112600
WTC11_00038162	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11.4960862905599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-19360956	True	NA	NA	False	NA	NA	NA	19362710	19343056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
WTC11_00038163	chr17	-	3113	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	54	-2254	0	0	multi-exon	FALSE	canonical	3	174	junction_1	28.5345794120436	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCTTCTGTATATT	-19360915	True	NA	-6	True	AATAAA	-13	NA	19362669	19340920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
WTC11_00038166	chr17	-	827	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	-190	-36	1	32	multi-exon	FALSE	canonical	3	26	junction_1	89.3657652571722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATAAATGCCTTTACAT	-19360978	True	NA	18	True	NA	NA	NA	19362732	19346913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
WTC11_00038168	chr17	-	1823	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	-3	0	0	multi-exon	FALSE	canonical	3	45	junction_5	8.01498596380555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-19386707	True	NA	1	True	AATAAA	-20	NA	19387190	19383441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
WTC11_00038169	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	22.1503950303375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-19386707	True	NA	1	True	AATAAA	-20	NA	19387190	19383441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
WTC11_00038170	chr17	-	968	1	FSM	ENSG00000189343.7	ENST00000458332.1	883	1	-26	-59	-26	59	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTGACCTTCAAGAGGA	NA	False	NA	NA	False	AATAAA	-37	NA	19446878	19445910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19445900_19446900
WTC11_00038171	chr17	-	9149	27	FSM	ENSG00000083290.20	ENST00000395544.9	9149	27	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_15	6.97417043485731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	-19867672	True	NA	-1	True	AATAAA	-22	NA	19867936	19770829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
WTC11_00038172	chr17	-	3476	16	NNC	ENSG00000108599.15	novel	4063	15	NA	NA	0	16113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.6389868797412	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	-19977667	False	NA	NA	False	NA	NA	NA	19977679	19888188	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_19888218_19904768_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
WTC11_00038173	chr17	-	4253	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	-190	0	190	multi-exon	FALSE	canonical	3	123	junction_6	12.969351627304	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTCCCTGGTGGAGTT	-19974272	True	NA	NA	False	NA	NA	NA	19977828	19904111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
WTC11_00038175	chr17	-	291	1	FSM	ENSG00000266126.1	ENST00000583067.1	366	1	-24	99	-24	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTTGTCACCAGGG	NA	False	NA	NA	False	NA	NA	NA	19929761	19929470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19929500_19929800
WTC11_00038176	chr17	-	720	4	FSM	ENSG00000108599.15	ENST00000460046.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	58.7593964116946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAAC	NA	False	NA	NA	False	AATAAA	-12	NA	19947475	19936001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19936431_19939712_19939850_19941825_19941911_19947406
WTC11_00038179	chr17	-	281	1	Genic_Genomic	ENSG00000214832.5	novel	NA	NA	NA	NA	819	75	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTCTGAGCCATGGT	NA	False	NA	NA	False	NA	NA	NA	20375574	20375293	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_20375300_20375600
WTC11_00038181	chr17	-	2469	1	FSM	ENSG00000229586.2	ENST00000436471.2	2662	1	100	93	100	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATCAAATTGGCAATG	NA	False	NA	NA	False	NA	NA	NA	20483891	20481422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20481400_20483900
WTC11_00038182	chr17	-	210	1	FSM	ENSG00000265916.1	ENST00000584274.1	634	1	475	-51	475	51	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCTGCCAGGGCCATCAC	-20532385	False	NA	NA	False	NA	NA	NA	20532406	20532196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20532200_20532400
WTC11_00038183	chr17	-	5189	13	FSM	ENSG00000124422.12	ENST00000261497.9	5189	13	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_10	55.5689636597824	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGCCAGTTTTCCTTT	-21026352	True	NA	-6	True	AATAAA	-17	NA	21043011	20999595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042664
WTC11_00038188	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	-21204753	True	NA	-5	True	ATTAAA	-17	NA	21214161	21197953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21214090
WTC11_00038189	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	-21204753	True	NA	-9	True	ATTAAA	-13	NA	21214161	21197957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21210935_21211228_21214090
WTC11_00038190	chr17	-	819	3	FSM	ENSG00000178307.10	ENST00000583264.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGAGGCAGCAGA	-21204755	True	NA	NA	False	NA	NA	NA	21214163	21198255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21211066_21211228_21214090
WTC11_00038191	chr17	-	4933	3	FSM	ENSG00000274180.1	ENST00000611551.1	4931	3	0	-2	0	2	multi-exon	FALSE	canonical	3	14	junction_1	2	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTGGTTTTCTGTCC	-21252709	True	NA	1	True	ATTAAA	-26	NA	21253410	21238867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21243430_21244105_21244225_21253158
WTC11_00038192	chr17	-	7912	2	FSM	ENSG00000212719.14	ENST00000647872.1	7914	2	2	0	2	0	multi-exon	FALSE	canonical	3	37	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATGTAATGTTTCATA	-21550904	True	NA	NA	False	AATAAA	-18	NA	21551678	21528309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21535539_21550995
WTC11_00038193	chr17	-	811	1	FSM	ENSG00000265683.1	ENST00000582878.1	727	1	24	-108	24	108	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACACAATGAGATATCAC	-27352385	False	NA	NA	False	AATAAA	-21	NA	27352560	27351749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27351700_27352600
WTC11_00038194	chr17	-	2897	18	ISM	ENSG00000007171.18	ENST00000646938.1	3995	26	14730	5	14730	-5	3prime_fragment	TRUE	canonical	2	6	junction_8	3.12596006013798	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTACATGAATTGCAT	NA	False	NA	-34	True	NA	NA	NA	27779050	27756800	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_27757354_27758880_27759076_27760029_27760179_27760622_27760745_27761143_27761232_27762797_27763006_27763980_27764145_27765534_27765717_27766509_27766589_27767704_27767838_27768976_27769152_27769534_27769585_27770912_27771018_27772307_27772453_27773160_27773244_27774256_27774452_27778689_27778792_27778881
WTC11_00038196	chr17	-	1075	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	-4	0	0	multi-exon	FALSE	canonical	3	74	junction_5	46.2990280675523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTACCTTTTTTCCTG	-28333140	True	NA	-2	True	AATAAA	-19	NA	28335449	28328324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
WTC11_00038197	chr17	-	861	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	-1	0	0	multi-exon	FALSE	canonical	3	99	junction_4	31.6889176211495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTACCTTTTTTCCTG	-28333163	True	NA	-2	True	AATAAA	-19	NA	28335472	28328324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
WTC11_00038201	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	44.9706570999357	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-28340604	True	NA	-8	True	ATTAAA	-14	NA	28357527	28346632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
WTC11_00038202	chr17	-	6493	5	FSM	ENSG00000076351.13	ENST00000612814.5	6492	5	0	-1	0	1	multi-exon	TRUE	canonical	1	2	junction_2	5.76085931090146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGAGTTCTGTGAGTC	-28405778	True	NA	NA	False	AATAAA	-23	NA	28406212	28394640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28399714_28400609_28400767_28402237_28402322_28404615_28405469_28405886
WTC11_00038203	chr17	-	5363	4	FSM	ENSG00000076351.13	ENST00000618626.1	5363	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	6.59966329107444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGAGTGTCTTTGTAT	-28405767	True	NA	0	True	NA	NA	NA	28406201	28395675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28399714_28400609_28400767_28404615_28405469_28405886
WTC11_00038205	chr17	-	1435	2	FSM	ENSG00000076351.13	ENST00000582590.1	1435	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCCCACCGCCTATTCA	-28405734	True	NA	NA	False	NA	NA	NA	28406168	28404315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28405469_28405886
WTC11_00038206	chr17	-	1381	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	-2	0	2	multi-exon	FALSE	canonical	3	361	junction_1	38.8546972707291	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGGCCAGCCTCTGT	-28548011	True	NA	-4	True	AATAAA	-20	NA	28552624	28546705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
WTC11_00038207	chr17	-	1655	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	-2	0	2	multi-exon	FALSE	canonical	3	415	junction_1	19.3045763140937	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGGCCAGCCTCTGT	-28548018	True	NA	-4	True	AATAAA	-20	NA	28552631	28546705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
WTC11_00038208	chr17	-	2055	3	FSM	ENSG00000109103.12	ENST00000470125.5	2050	3	0	-5	0	2	multi-exon	FALSE	canonical	3	415	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGGCCAGCCTCTGT	-28544786	False	NA	-4	True	AATAAA	-20	NA	28549399	28546705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547850_28547998_28548102_28548591
WTC11_00038211	chr17	-	3094	2	FSM	ENSG00000087111.21	ENST00000487231.5	3088	2	0	-6	0	2	multi-exon	FALSE	canonical	3	402	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTCTACTCTTTCTGC	NA	False	NA	1	True	AATAAA	-35	NA	28556829	28553380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850
WTC11_00038212	chr17	-	2795	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	26	-6	0	2	multi-exon	FALSE	canonical	3	322	junction_2	23.7573146630675	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTCTACTCTTTCTGC	-28571499	False	3282	1	True	AATAAA	-35	NA	28571510	28553380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
WTC11_00038213	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_11	30.4335069800941	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571513	False	3282	-5	True	AATAAA	-29	NA	28571524	28553386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
WTC11_00038214	chr17	-	2398	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_10	103.707714274301	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTCTACTCTTTCTG	-28571517	False	3282	0	True	AATAAA	-34	NA	28571528	28553381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
WTC11_00038215	chr17	-	901	3	FSM	ENSG00000087111.21	ENST00000484580.6	919	3	18	0	18	0	multi-exon	FALSE	canonical	3	331	junction_2	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAGGACTTTCAAGGG	NA	False	NA	NA	False	AAGAAA	-9	NA	28560330	28556468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28556973_28558475_28558591_28560048
WTC11_00038219	chr17	-	730	7	NNC	ENSG00000076382.17	novel	3786	24	NA	NA	0	11297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	303.654088652789	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGTAGACAAGGGGT	-28579241	False	NA	NA	False	AAAAAG	-4	NA	28579252	28566267	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28566296_28577573_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140
WTC11_00038220	chr17	-	1613	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	-5	0	0	multi-exon	FALSE	canonical	3	216	junction_8	41.3430768085782	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	-28573613	True	NA	-24	True	AATAAA	-19	NA	28576895	28573114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
WTC11_00038221	chr17	-	1724	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	-2	0	2	multi-exon	TRUE	canonical	3	40	junction_9	106.522819673116	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTCTGTTTTACACA	-28576937	False	NA	-22	True	AATAAA	-21	NA	28576948	28573112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
WTC11_00038223	chr17	-	542	3	FSM	ENSG00000076382.17	ENST00000580377.2	547	3	0	5	0	0	multi-exon	FALSE	canonical	3	759	junction_1	23.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGCTTACGGAATCTTA	-28578419	False	NA	-9	True	AATAAA	-19	NA	28578430	28577569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28577771_28578009_28578293_28578372
WTC11_00038224	chr17	-	657	4	FSM	ENSG00000076382.17	ENST00000582175.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_1	40.8275506109403	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGCTTACGGAATCTTA	-28578724	False	NA	-9	True	AATAAA	-19	NA	28578735	28577569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28577771_28578009_28578091_28578217_28578529_28578671
WTC11_00038225	chr17	-	3788	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	-2	0	-2	multi-exon	FALSE	canonical	3	543	junction_17	72.075417338362	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAGCTTACGGAATCT	-28590952	True	NA	-11	True	AATAAA	-17	NA	28599025	28577571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
WTC11_00038226	chr17	-	1046	3	FSM	ENSG00000076382.17	ENST00000580676.1	1023	3	0	-23	0	0	multi-exon	FALSE	canonical	3	759	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTCTCCAAGCTTA	-28579241	False	NA	-19	True	AATAAA	-9	NA	28579252	28577579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28577771_28578009_28578753_28579140
WTC11_00038237	chr17	-	2806	1	FSM	ENSG00000167524.16	ENST00000579457.1	2975	1	1149	-980	1149	979	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGTAGCTGGGATTAC	-28609777	False	NA	NA	False	NA	NA	NA	28609789	28606983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28607000_28609800
WTC11_00038238	chr17	-	8539	40	Fusion	ENSG00000167524.16_ENSG00000007202.15	novel	7428	39	NA	NA	0	72	multi-exon	TRUE	non_canonical	0	0	junction_1	87.5616660696421	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGATAAAAACTCTGAAT	-28638813	True	NA	60	True	TTTAAA	-24	NA	28645111	28607890	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_28609062_28614454_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00038240	chr17	-	632	5	FSM	ENSG00000167524.16	ENST00000527918.6	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.87367006223537	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTTGGTCGGCTGTTG	-28613808	False	NA	NA	False	NA	NA	NA	28613820	28612338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28612367_28612617_28612688_28613077_28613147_28613261_28613346_28613439
WTC11_00038241	chr17	-	602	5	FSM	ENSG00000167524.16	ENST00000469832.7	602	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	9.95929214352105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCCCCCAGGGTCTTT	-28614185	False	NA	NA	False	NA	NA	NA	28614197	28612598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28612688_28613077_28613147_28613261_28613346_28613439_28613689_28614086
WTC11_00038242	chr17	-	7383	39	NIC	ENSG00000007202.15	novel	7428	39	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	75.222665772913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTGTGTGTTGA	-28638813	True	NA	-1	True	AAAAAG	-22	NA	28645111	28614439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00038243	chr17	-	7320	38	NIC	ENSG00000007202.15	novel	7428	39	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	75.6511832952162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTGTGTGTTGA	-28638857	True	NA	-1	True	AAAAAG	-22	NA	28645155	28614439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00038244	chr17	-	7434	39	FSM	ENSG00000007202.15	ENST00000528896.7	7428	39	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_6	75.222665772913	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTGTGTGTTGA	-28638860	True	NA	-1	True	AAAAAG	-22	NA	28645158	28614439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00038249	chr17	-	1287	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	22	0	-22	multi-exon	FALSE	canonical	3	348	junction_1	2	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAGCCAGTGAAATG	-28657259	True	NA	NA	False	AATACA	-5	NA	28661906	28648367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649277_28655286_28655484_28661725
WTC11_00038250	chr17	-	1246	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	-221	0	-22	multi-exon	FALSE	canonical	3	42	junction_2	153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAGCCAGTGAAATG	-28661462	True	NA	NA	False	AATACA	-5	NA	28662185	28648367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649277_28655286_28655484_28662045
WTC11_00038251	chr17	-	681	3	FSM	ENSG00000132581.10	ENST00000588472.6	681	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGTACTGATAAAACA	-28661409	False	NA	NA	False	NA	NA	NA	28662132	28648740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649138_28655286_28655484_28662045
WTC11_00038255	chr17	-	1775	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	-209	0	-175	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0055547841649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28712047	False	NA	-3	True	AATAAA	-18	NA	28712063	28703196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
WTC11_00038258	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	324.262734503449	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717737	False	3031	-2	True	ATTAAA	-19	NA	28717748	28714283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
WTC11_00038259	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_8	131.832478809798	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717857	False	NA	-2	True	ATTAAA	-19	NA	28717868	28714283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
WTC11_00038260	chr17	-	1185	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	-1	0	0	multi-exon	FALSE	canonical	3	103	junction_10	416.329965291954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717927	False	3832	-2	True	ATTAAA	-19	NA	28718166	28714283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
WTC11_00038261	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	334.06168592043	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718176	False	3832	-2	True	ATTAAA	-19	NA	28718415	28714283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
WTC11_00038271	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	337.681210611429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	-28717922	False	NA	NA	False	NA	NA	NA	28718161	28714624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
WTC11_00038276	chr17	-	730	4	FSM	ENSG00000109113.20	ENST00000636154.2	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	483.173076880555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGGCATTCCCTTCAG	-28717697	False	NA	NA	False	NA	NA	NA	28717708	28715828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28715902_28715992_28716062_28716902_28716995_28717212
WTC11_00038280	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	17.2497987105808	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-28722401	True	NA	-1	True	AATGAA	-15	NA	28726233	28724347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
WTC11_00038281	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	133.369994959719	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	-28726917	False	239	-106	True	NA	NA	NA	28726932	28724452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
WTC11_00038282	chr17	-	4247	3	FSM	ENSG00000173065.14	ENST00000582059.6	3974	3	-258	-15	-47	15	multi-exon	FALSE	canonical	3	10	junction_2	53	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	NA	False	NA	-2	True	AGTAAA	-30	NA	28812482	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759765_28766585_28766708_28812157
WTC11_00038283	chr17	-	4261	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	-15	0	15	multi-exon	FALSE	canonical	3	360	junction_2	10.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28807351	True	NA	-2	True	AGTAAA	-30	NA	28812435	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28812208
WTC11_00038284	chr17	-	4344	4	NIC	ENSG00000173065.14	novel	4169	4	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	141.349055729267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	NA	False	NA	-17	True	AGTAAA	-15	NA	28812485	28755979	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28759877_28766585_28766708_28790377_28790426_28812208
WTC11_00038285	chr17	-	4162	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	-15	0	15	multi-exon	FALSE	canonical	3	7	junction_3	146.348898185125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28838633	True	NA	-2	True	AGTAAA	-30	NA	28842727	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
WTC11_00038286	chr17	-	4024	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	1	-15	0	15	multi-exon	FALSE	canonical	3	52	junction_2	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28838689	True	NA	-2	True	AGTAAA	-30	NA	28842783	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759765_28766585_28766708_28842681
WTC11_00038287	chr17	-	4143	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	-15	0	15	multi-exon	FALSE	canonical	3	52	junction_2	164.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28838696	True	NA	-2	True	AGTAAA	-30	NA	28842790	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28842681
WTC11_00038289	chr17	-	4177	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	-15	0	15	multi-exon	FALSE	canonical	3	43	junction_3	153.573724604468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28838696	True	NA	-2	True	AGTAAA	-30	NA	28842790	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
WTC11_00038290	chr17	-	4135	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	27	-15	11	15	multi-exon	FALSE	canonical	3	7	junction_3	47.4888144724629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	-28838718	True	NA	-2	True	AGTAAA	-30	NA	28842812	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
WTC11_00038291	chr17	-	4302	3	FSM	ENSG00000173065.14	ENST00000577513.6	4302	3	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	NA	False	NA	-17	True	AGTAAA	-15	NA	28855232	28755979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28854949
WTC11_00038292	chr17	-	528	2	FSM	ENSG00000173065.14	ENST00000584059.1	568	2	40	0	40	0	multi-exon	FALSE	canonical	3	381	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGATGCGTATGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	28767064	28759827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585
WTC11_00038293	chr17	-	4561	16	Fusion	ENSG00000132589.16_ENSG00000167536.14	novel	2668	11	NA	NA	0	51239	intron_retention	FALSE	non_canonical	0	0	junction_1	420.405592520154	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTTGATCTTGATTTC	-28900665	True	NA	NA	False	NA	NA	NA	28902965	28828095	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_28828127_28879338_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525_28898893_28900989_28901302_28901492_28901617_28902582_28902702_28902817
WTC11_00038294	chr17	-	2476	11	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_7	306.37018458068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886271	True	NA	-7	True	AATAAA	-17	NA	28897610	28879338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28888944_28889027_28897525
WTC11_00038295	chr17	-	2679	12	FSM	ENSG00000132589.16	ENST00000580805.5	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	401.903158435376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886314	True	NA	-7	True	AATAAA	-17	NA	28897653	28879338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28885856_28885948_28888944_28889027_28897525
WTC11_00038296	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	95.063347300629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886394	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
WTC11_00038298	chr17	-	426	3	FSM	ENSG00000132589.16	ENST00000581509.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAACTTCAGGTGACT	-28889000	False	NA	NA	False	AAAACA	-20	NA	28889026	28882978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28883232_28884224_28884316_28888944
WTC11_00038300	chr17	-	2144	4	FSM	ENSG00000167536.14	ENST00000394901.7	2037	4	-107	0	-99	0	multi-exon	FALSE	canonical	3	227	junction_2	17.8200885394982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-28903167	False	NA	-9	True	AATAAA	-18	NA	28903178	28897780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582
WTC11_00038301	chr17	-	1929	5	FSM	ENSG00000167536.14	ENST00000378895.9	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	21.7313138121007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-28900779	True	NA	-9	True	AATAAA	-18	NA	28903079	28897780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582_28902702_28902817
WTC11_00038302	chr17	-	7684	11	FSM	ENSG00000109118.14	ENST00000577226.5	7679	11	0	-5	0	2	multi-exon	FALSE	canonical	3	55	junction_10	21.1471038206181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGACTGTCTGTCCT	-28950037	False	NA	-2	True	TATAAA	-21	NA	28951307	28905247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
WTC11_00038303	chr17	-	4506	15	FSM	ENSG00000109118.14	ENST00000332830.9	4506	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	25.4282704637085	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	-28950248	True	NA	-4	True	TATAAA	-19	NA	28951518	28905249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
WTC11_00038310	chr17	-	631	4	FSM	ENSG00000063015.21	ENST00000544224.2	807	4	176	0	176	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTTCTCCAGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	28957637	28956363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28956468_28956718_28956758_28957044_28957243_28957347
WTC11_00038311	chr17	-	691	2	ISM	ENSG00000063015.21	ENST00000442608.7	3805	16	-83	26400	37	19	5prime_fragment	FALSE	canonical	3	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACATGGGAAGGCCGTG	-29005862	True	NA	NA	False	NA	NA	NA	29005996	28981530	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_28982040_29005814
WTC11_00038312	chr17	-	9940	42	FSM	ENSG00000196535.18	ENST00000527372.7	9980	42	0	40	0	-40	multi-exon	TRUE	canonical	2	21	junction_31	29.6820349786855	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGCCCAGAAAATAAAGT	-29177199	True	NA	NA	False	NA	NA	NA	29180398	29071161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
WTC11_00038313	chr17	-	9982	43	NNC	ENSG00000196535.18	novel	9980	42	NA	NA	-21	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	34.3928550824968	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGCCCAGAAAATAAAGT	-29177220	True	NA	NA	False	NA	NA	NA	29180419	29071161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29117689_29117711_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
WTC11_00038314	chr17	-	7504	41	FSM	ENSG00000196535.18	ENST00000531253.5	7504	41	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_30	31.8863215187955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCAGTTTTCCTGCCTG	-29177165	True	NA	-14	True	AATAAA	-19	NA	29180364	29073518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29074915_29082315_29082439_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
WTC11_00038317	chr17	-	1104	1	FSM	ENSG00000178082.6	ENST00000580812.1	1049	1	-48	-7	-48	7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACATTAAACATTGCAAT	NA	False	NA	NA	False	ATTAAA	-4	NA	29204522	29203418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29203400_29204500
WTC11_00038318	chr17	-	10880	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	-3	0	3	multi-exon	FALSE	canonical	3	130	junction_3	28.003967972811	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTTATCTTTTGTG	-29273061	True	NA	1	True	AATAAA	-19	NA	29294148	29255835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
WTC11_00038319	chr17	-	3497	2	FSM	ENSG00000168792.5	ENST00000307201.5	3492	2	0	-5	0	5	multi-exon	FALSE	canonical	3	17	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTGCCGGTGAACAACA	-29567016	False	NA	-3	True	AATAAA	-22	NA	29567037	29560541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29563087_29566085
WTC11_00038321	chr17	-	3787	20	FSM	ENSG00000108262.16	ENST00000225394.8	3783	20	0	-4	0	4	multi-exon	FALSE	canonical	3	261	junction_14	17.1685469032788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGATGCTTAGAGAATG	-29586815	True	NA	-3	True	AATAAA	-18	NA	29589648	29573470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326
WTC11_00038322	chr17	-	2798	20	FSM	ENSG00000108262.16	ENST00000579937.5	2798	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4666204522919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAGCAGGGGCCTGCAA	-29586759	True	NA	NA	False	NA	NA	NA	29589592	29574450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574962_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326
WTC11_00038325	chr17	-	861	5	FSM	ENSG00000167549.19	ENST00000579388.6	861	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6.94172168845741	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCGCGCCAGGCAGGCG	-29616774	False	NA	NA	False	NA	NA	NA	29617237	29615731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29615858_29615944_29616176_29616278_29616337_29616701_29616848_29616937
WTC11_00038326	chr17	-	367	1	FSM	ENSG00000264007.1	ENST00000582367.1	638	1	249	22	249	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTTTACACAGCAAAAT	-29621993	False	NA	NA	False	ATTAAA	-2	NA	29622005	29621638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29621600_29622000
WTC11_00038327	chr17	-	9382	15	FSM	ENSG00000141298.19	ENST00000269033.7	9327	15	-57	2	19	-2	multi-exon	FALSE	canonical	2	6	junction_2	4.21186371080159	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGTACTTCATCAGATG	-29928941	True	NA	-2	True	AATAAA	-19	NA	29930209	29625939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29632932_29635967_29636803_29648143_29648345_29650653_29650801_29655560_29655608_29666866_29666996_29667129_29667224_29671934_29672130_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
WTC11_00038328	chr17	-	1347	13	FSM	ENSG00000141298.19	ENST00000394848.5	1796	13	0	449	0	-449	multi-exon	FALSE	canonical	2	8	junction_1	3.3166247903554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAGTGACTTTCTCCA	-29928732	False	NA	NA	False	NA	NA	NA	29930000	29648142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29648345_29650653_29650801_29655560_29655608_29666866_29666996_29667129_29667224_29671934_29672130_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
WTC11_00038330	chr17	-	800	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	165	0	-165	multi-exon	FALSE	canonical	1	1	junction_1	5.22161910928488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTTTGCATGATCT	-29928905	True	NA	NA	False	AATGAA	-39	NA	29930173	29674065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
WTC11_00038331	chr17	-	297	1	FSM	ENSG00000265713.1	ENST00000580031.1	955	1	193	465	193	-465	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCACCTCAGATGGCTG	NA	False	NA	NA	False	GATAAA	-35	NA	29776508	29776211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29776200_29776500
WTC11_00038332	chr17	-	712	3	NNC	ENSG00000141298.19	novel	570	2	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTCTGTAGTGCC	-29928948	True	NA	-14	True	AATAAA	-24	NA	29930216	29925215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_29925556_29928491_29928585_29929937
WTC11_00038333	chr17	-	672	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	-41	-61	7	1	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTCTGTAGTGCC	-29929001	True	NA	-14	True	AATAAA	-24	NA	29930269	29925215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29925556_29929937
WTC11_00038334	chr17	-	2319	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	-12	0	12	multi-exon	FALSE	canonical	3	328	junction_8	37.7008669913681	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTGTCTGAGAAGTG	-30287299	True	NA	-4	True	AATAAA	-31	NA	30291944	30248190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
WTC11_00038335	chr17	-	817	9	FSM	ENSG00000108578.15	ENST00000577623.5	823	9	0	6	0	0	multi-exon	FALSE	canonical	3	25	junction_7	128.265106322803	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTCAGTTTGGTAATA	-30291786	False	NA	NA	False	NA	NA	NA	30291904	30266884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286852_30291491_30291509_30291806
WTC11_00038337	chr17	-	255	1	FSM	ENSG00000279337.1	ENST00000625101.1	200	1	0	-55	0	55	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACAGGGCGAGACTC	NA	False	NA	NA	False	NA	NA	NA	30725181	30724926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30724900_30725200
WTC11_00038339	chr17	-	4565	8	FSM	ENSG00000176390.12_ENSG00000265791.1	ENST00000324238.7	2873	8	21	-1713	0	522	multi-exon	FALSE	canonical	2	86	junction_2	28.7487355533833	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCAGGTGTTGTGGTG	-30818609	True	NA	NA	False	NA	NA	NA	30824671	30780970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
WTC11_00038340	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	4.54606056566195	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905506	True	NA	-3	True	AATAAA	-13	NA	30906238	30898985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
WTC11_00038341	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30900563_30904065_30904530_30906167
WTC11_00038342	chr17	-	1262	4	FSM	ENSG00000172171.11	ENST00000306049.9	1262	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.8760836282606	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30899607_30900412_30900522_30904065_30904530_30906167
WTC11_00038344	chr17	-	546	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	169	40	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTTTTACAGTAGTA	-31095258	False	NA	-13	True	AATAAA	-27	NA	31095281	31090746	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_31091119_31093372_31093492_31095226
WTC11_00038345	chr17	-	874	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_2	258.25955935841	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCGTCTGCTTTTTTCC	-31855238	True	NA	0	True	AATAAA	-22	NA	31859244	31851864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
WTC11_00038347	chr17	-	4336	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	-6	0	6	multi-exon	FALSE	canonical	3	418	junction_7	26.4425769648726	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTTAGAACATTTTTA	-31893878	True	NA	-24	True	ATTAAA	-19	NA	31901708	31860897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
WTC11_00038348	chr17	-	565	5	FSM	ENSG00000108651.10	ENST00000581012.6	563	5	0	-2	0	2	multi-exon	FALSE	canonical	3	18	junction_3	251.775073230056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTTGCTCTGTTGCC	-31873382	False	NA	-5	True	ATTAAA	-19	NA	31873395	31863170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31865365_31865439_31866654_31866716_31868045_31868113_31873377
WTC11_00038349	chr17	-	915	5	FSM	ENSG00000108651.10	ENST00000484661.1	694	5	-43	-178	-43	2	multi-exon	FALSE	canonical	3	466	junction_4	24.0676130931175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTTGCTCTGTTGCC	-31873978	False	NA	-5	True	ATTAAA	-19	NA	31873991	31863170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672
WTC11_00038350	chr17	-	410	2	FSM	ENSG00000108651.10	ENST00000579459.1	410	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGGTCTTGCTCTGTT	-31868066	False	NA	-8	True	ATTAAA	-16	NA	31868112	31863173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31868045
WTC11_00038352	chr17	-	206	1	FSM	ENSG00000253058.1	ENST00000517249.1	129	1	48	-125	48	125	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCAGGCGCCTGTAA	NA	False	NA	NA	False	AATACA	-17	NA	31963885	31963679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31963700_31963900
WTC11_00038353	chr17	-	280	1	FSM	ENSG00000265574.1	ENST00000583470.1	1029	1	784	-35	784	35	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCGCCTTCAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	32111806	32111526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32111500_32111800
WTC11_00038354	chr17	-	1593	2	FSM	ENSG00000214708.4	ENST00000398832.2	1599	2	6	0	6	0	multi-exon	FALSE	canonical	2	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGATTTTTTGTTTTG	-32142888	True	NA	NA	False	ATTAAA	-21	NA	32143129	32141225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32142714_32143024
WTC11_00038355	chr17	-	1035	1	FSM	ENSG00000280020.1	ENST00000623905.1	1129	1	41	53	41	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGCCAGGCAGAGGCG	NA	False	NA	NA	False	NA	NA	NA	32180033	32178998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32179000_32180000
WTC11_00038356	chr17	-	1419	11	NNC	ENSG00000108666.10	novel	4547	10	NA	NA	0	26914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.576685727108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCAACTCCATCAGTTA	-32340109	True	NA	NA	False	AAAAAG	-2	NA	32342167	32297650	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_32297682_32331593_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
WTC11_00038357	chr17	-	4549	10	FSM	ENSG00000108666.10	ENST00000577809.6	4547	10	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_6	156.053409660496	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTTTGTTTAATGA	-32340115	True	NA	1	True	AATAAA	-20	NA	32342173	32328438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
WTC11_00038358	chr17	-	460	2	FSM	ENSG00000108666.10	ENST00000582961.1	458	2	0	-2	0	2	multi-exon	FALSE	canonical	3	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGAGTCCTAGATAGA	-32334471	False	NA	-18	True	AATAAA	-16	NA	32334543	32331593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32331979_32334468
WTC11_00038359	chr17	-	1945	9	ISM	ENSG00000108666.10	ENST00000577809.6	4547	10	164	3153	-57	2	intron_retention	FALSE	canonical	0	0	junction_6	163.824935144196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGAGTCCTAGATAGA	-32341983	False	NA	-18	True	AATAAA	-16	NA	32342009	32331593	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203
WTC11_00038360	chr17	-	884	9	FSM	ENSG00000108666.10	ENST00000580558.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	206.157706622867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTTTCCGACAAGTA	-32341926	False	NA	NA	False	TTTAAA	-21	NA	32341952	32333457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341862
WTC11_00038363	chr17	-	765	7	FSM	ENSG00000108666.10	ENST00000583221.5	776	7	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_3	215.133033777294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACATTAACAGGTAAAG	-32342172	False	NA	NA	False	AAAACA	-4	NA	32342198	32334788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
WTC11_00038365	chr17	-	5579	22	FSM	ENSG00000176658.17	ENST00000318217.10	5510	22	-156	87	-103	0	multi-exon	FALSE	canonical	3	93	junction_21	14.1114771320395	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGGTGTTCTGCTT	-32877270	True	NA	-12	True	AATAAA	-14	NA	32877280	32492608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32494916_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
WTC11_00038366	chr17	-	3507	22	FSM	ENSG00000176658.17	ENST00000579584.5	3500	22	0	-7	0	7	multi-exon	FALSE	canonical	3	15	junction_1	25.7391414262509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGTCTGTACTGAA	-32874928	True	NA	NA	False	AATAAA	-27	NA	32877144	32594195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32594567_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
WTC11_00038370	chr17	-	7156	7	FSM	ENSG00000092871.17	ENST00000394597.7	7210	7	54	0	54	0	multi-exon	FALSE	canonical	3	7	junction_6	28.5116935075184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	-35063607	True	NA	NA	False	ATTAAA	-20	NA	35063653	35005989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35063575
WTC11_00038371	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.3968806648525	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
WTC11_00038372	chr17	-	4039	5	FSM	ENSG00000092871.17	ENST00000584655.5	4039	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.1236587674008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTCTGGTGCGAGGA	-35088385	True	NA	NA	False	AATAAA	-18	NA	35089295	35009111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35016369_35016581_35021370_35021782_35026373_35026562_35089104
WTC11_00038374	chr17	-	9965	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	1	0	-1	multi-exon	FALSE	canonical	3	33	junction_7	14.0712472794703	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTCCTATAAATATGTC	-35119849	False	NA	-20	True	AATAAA	-16	NA	35119860	35092221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
WTC11_00038379	chr17	-	5301	12	FSM	ENSG00000073536.18	ENST00000586869.5	5286	12	-13	-2	0	2	multi-exon	FALSE	canonical	3	191	junction_10	25.5928063239886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTGACTCATCCTGAA	-35136924	True	NA	-8	True	AATAAA	-18	NA	35142297	35128750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978
WTC11_00038381	chr17	-	1107	8	FSM	ENSG00000073536.18	ENST00000588019.1	1107	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	101.482480643464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCCAGAAATCGAAGGTC	-35131794	False	NA	NA	False	NA	NA	NA	35137167	35132243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35134942_35135060_35135248_35135452_35136168_35136216_35136361_35136498_35137000
WTC11_00038385	chr17	-	438	1	FSM	ENSG00000267315.1	ENST00000591442.1	263	1	-69	-106	-69	106	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTCAATGAATAATGA	NA	False	NA	NA	False	AAAACA	-2	NA	35377747	35377309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35377300_35377700
WTC11_00038386	chr17	-	1212	2	FSM	ENSG00000267745.1	ENST00000587012.1	1212	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGTGATTTGTTGT	NA	False	NA	2	True	AATACA	-17	NA	35409768	35406683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35407592_35409464
WTC11_00038387	chr17	-	5309	4	FSM	ENSG00000172123.13_ENSG00000267745.1	ENST00000304905.10	2506	4	-32	-2771	-32	-1467	multi-exon	FALSE	canonical	3	21	junction_3	5.8878405775519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCACTCCAAGTATAATT	-35432507	False	NA	NA	False	NA	NA	NA	35432532	35408150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
WTC11_00038388	chr17	-	627	1	FSM	ENSG00000267102.1	ENST00000590824.1	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGGGTAGTAATAGTGG	NA	False	NA	NA	False	NA	NA	NA	35410228	35409601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35409600_35410200
WTC11_00038392	chr17	-	8382	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	16	0	-16	multi-exon	FALSE	canonical	3	52	junction_1	12.3773987574126	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATTTAAAAGTTCTGTG	-35446995	True	NA	NA	False	AATAAA	-3	NA	35448766	35435111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
WTC11_00038397	chr17	-	771	1	FSM	ENSG00000267312.1	ENST00000588022.1	1070	1	255	44	255	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTGGTGTTGGTAAA	-35460284	False	NA	NA	False	NA	NA	NA	35460295	35459524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35459500_35460300
WTC11_00038398	chr17	-	2617	3	FSM	ENSG00000108733.11	ENST00000225873.9	2617	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGACTTTTTGAGGTGT	-35577979	True	NA	-1	True	AATAAA	-17	NA	35578571	35574794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35576182_35577037_35577592_35577895
WTC11_00038400	chr17	-	687	5	FSM	ENSG00000278023.7	ENST00000619828.4	687	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	17.5979402203781	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAATATCCCAAGG	-35929923	False	NA	NA	False	NA	NA	NA	35930282	35918341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075
WTC11_00038401	chr17	-	1038	3	FSM	ENSG00000278259.5	ENST00000620567.1	1038	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCACATAAGCACTTTTG	-36499325	False	NA	NA	False	NA	NA	NA	36499344	36495932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36496407_36498265_36498560_36499074
WTC11_00038404	chr17	-	3398	27	NNC	ENSG00000278259.5	novel	3931	26	NA	NA	15	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	55.5220516988707	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTTGGTGCCTTTGTT	-36529919	True	NA	NA	False	NA	NA	NA	36534850	36496253	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511358_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532317_36532415_36532526_36532682_36533952_36534105_36534760
WTC11_00038407	chr17	-	569	2	FSM	ENSG00000278259.5	ENST00000610576.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCACATGATAAATGT	-36504114	False	NA	NA	False	AATAAA	-21	NA	36504132	36502814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36503201_36503949
WTC11_00038414	chr17	-	1638	11	NNC	ENSG00000278259.5	novel	1640	11	NA	NA	-248	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	48.9043965303734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-36529536	False	NA	-23	True	ATTAAA	-21	NA	36534467	36513085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534361
WTC11_00038415	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_8	18.0820352836731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-36529937	True	NA	-23	True	ATTAAA	-21	NA	36534868	36513085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
WTC11_00038419	chr17	-	9995	56	FSM	ENSG00000278540.5	ENST00000616317.5	10013	56	17	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_15	81.8534752161365	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAGTTTGTCATTTCA	NA	False	NA	-24	True	AATAAA	-19	NA	37406819	37084992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466_37210491_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37406261
WTC11_00038420	chr17	-	9554	56	FSM	ENSG00000278540.5	ENST00000614428.4	9554	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	74.9615218099667	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTACAGTTTGTCATTTC	-37351777	True	NA	-25	True	AATAAA	-18	NA	37359116	37084993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466_37210491_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37358998
WTC11_00038423	chr17	-	1217	1	FSM	ENSG00000274308.1	ENST00000610837.1	814	1	75	-478	75	478	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCACCCAATTATGTG	-37141334	False	NA	NA	False	NA	NA	NA	37141349	37140132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37140100_37141300
WTC11_00038430	chr17	-	710	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	76.9083148228388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	-37351727	True	NA	0	True	AATAAA	-24	NA	37359066	37328644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
WTC11_00038432	chr17	-	4841	20	FSM	ENSG00000275066.5	ENST00000621136.4	4841	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	30.5001702915186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGGCTAAGAGCTGTGT	-37604651	True	NA	NA	False	CATAAA	-16	NA	37609411	37517829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37519072_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
WTC11_00038433	chr17	-	4758	23	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	26.1554475782107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	-37604626	True	NA	NA	False	AATAAA	-21	NA	37609386	37518460	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37579131_37579435_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
WTC11_00038434	chr17	-	4050	20	FSM	ENSG00000275066.5	ENST00000616179.4	4050	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	34.7374800579378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	-37604626	True	NA	NA	False	AATAAA	-21	NA	37609386	37518460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37519072_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542431_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
WTC11_00038441	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_12	43.3856108000083	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-37637235	True	NA	-4	True	AATAAA	-35	NA	37643446	37609738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
WTC11_00038443	chr17	-	776	6	FSM	ENSG00000278053.5	ENST00000613633.1	776	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	160.632001792918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAAAGCAAGATCCCCC	-37637222	True	NA	NA	False	NA	NA	NA	37643433	37626825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37642109_37642309_37643333
WTC11_00038444	chr17	-	1700	9	ISM	ENSG00000274512.6	ENST00000617678.2	2065	14	4163	0	4163	0	3prime_fragment	TRUE	canonical	3	7	junction_3	26.7578843520933	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGATTTTAGACAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	37984885	37978154	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_37979039_37980019_37980173_37980542_37980643_37981105_37981172_37981555_37981651_37982363_37982485_37983027_37983077_37984324_37984435_37984763
WTC11_00038446	chr17	-	1656	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	-13	2	13	multi-exon	FALSE	canonical	2	8	junction_9	108.205574167839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCTTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	38257192	38195689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
WTC11_00038447	chr17	-	1479	12	FSM	ENSG00000274487.3	ENST00000620148.2	1479	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	112.557423361229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGCTTGAGATAGAAAT	NA	False	NA	NA	False	NA	NA	NA	38257152	38195871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202735_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
WTC11_00038449	chr17	-	726	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	-24	32	24	multi-exon	FALSE	canonical	3	38	junction_2	13.8162545173751	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCAAGGACTCATTTT	-38451946	True	NA	NA	False	AATAAA	-39	NA	38452399	38450369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
WTC11_00038450	chr17	-	619	3	FSM	ENSG00000276170.5	ENST00000688817.1	654	3	52	-17	-24	17	multi-exon	FALSE	canonical	3	37	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGACTAGTTCAAGGAC	-38451934	True	NA	NA	False	AATAAA	-42	NA	38452387	38450376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451625_38451828_38452317
WTC11_00038451	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	-38451493	False	NA	-65	True	NA	NA	NA	38451946	38450625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451625
WTC11_00038455	chr17	-	355	2	FSM	ENSG00000277363.5	ENST00000621275.1	453	2	98	0	98	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTCTGGGCCGAGGAG	NA	False	NA	NA	False	GGGGCT	-36	NA	38546623	38545267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38545460_38546460
WTC11_00038456	chr17	-	3253	1	FSM	ENSG00000273604.2	ENST00000621654.2	3255	1	4	-2	4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTTTCATTTTTCTTT	NA	False	NA	2	True	CATAAA	-23	NA	38674953	38671700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38671700_38675000
WTC11_00038457	chr17	-	2634	11	FSM	ENSG00000277258.5	ENST00000620225.5	2634	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	50.0880225203591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	NA	False	NA	-4	True	AATAAA	-15	NA	38748336	38733897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
WTC11_00038458	chr17	-	3062	12	FSM	ENSG00000277258.5	ENST00000616199.4	3062	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.6741111312861	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	NA	False	NA	-4	True	AATAAA	-15	NA	38749817	38733897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195_38748309_38749361
WTC11_00038460	chr17	-	478	5	FSM	ENSG00000276293.5	ENST00000613767.4	478	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	47.2195669188103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACGAGGAGTGTGAGAA	-38779920	False	NA	NA	False	NA	NA	NA	38779930	38771173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38779851
WTC11_00038462	chr17	-	3084	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	-17	0	17	multi-exon	FALSE	canonical	3	62	junction_5	23.4841685575518	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGTGTTTACGAATTTC	-38824919	True	NA	9	True	TTTAAA	-18	NA	38825321	38800423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
WTC11_00038466	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_4	1166.50618836764	3567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	-38794228	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
WTC11_00038467	chr17	-	645	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	-18	-2	0	2	multi-exon	FALSE	canonical	2	281	junction_1	3412.1314511607	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAAATGTTTTCCTTTG	-38794247	True	NA	NA	False	ATTAAA	-19	NA	38853740	38847862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
WTC11_00038468	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	3917.6953285701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38793935	False	NA	-16	True	AATAAA	-25	NA	38853428	38850080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
WTC11_00038469	chr17	-	2779	3	FSM	ENSG00000125691.14	ENST00000584912.5	2779	3	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_2	1383.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38794247	True	NA	-16	True	AATAAA	-25	NA	38853740	38850080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38852733_38853021_38853106_38853697
WTC11_00038473	chr17	-	3363	14	FSM	ENSG00000067191.16	ENST00000394303.8	3711	14	0	348	0	0	multi-exon	FALSE	canonical	2	4	junction_8	16.6853938180645	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTCCCAAGCCTGC	-39195971	True	NA	-12	True	TATAAA	-20	NA	39197669	39173800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
WTC11_00038477	chr17	-	1864	13	FSM	ENSG00000067191.16	ENST00000344140.5	1889	13	0	25	0	-25	multi-exon	FALSE	canonical	1	3	junction_6	17.3979165419311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTAAAAAAATAAGATGAG	-39196005	True	NA	NA	False	NA	NA	NA	39197703	39177160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
WTC11_00038479	chr17	-	10332	15	FSM	ENSG00000108306.13	ENST00000264658.11	10332	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_14	4.49773185469462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTTCCTGTGG	-39400699	True	NA	-24	True	ATTAAA	-17	NA	39401626	39252662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39401360
WTC11_00038480	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.38344811876192	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	-39402172	True	NA	NA	False	NA	NA	NA	39402523	39261459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
WTC11_00038481	chr17	-	2877	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	11	-18	6	18	multi-exon	TRUE	canonical	3	13	junction_1	5.34744384817107	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGCCTTTGAATACT	-39445639	True	NA	-14	True	AATAAA	-38	NA	39451257	39404266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
WTC11_00038482	chr17	-	8149	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	6	-18	6	18	multi-exon	FALSE	canonical	3	26	junction_7	3.20156211871642	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGCCTTTGAATACT	-39445639	True	NA	-14	True	AATAAA	-38	NA	39451257	39404266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
WTC11_00038486	chr17	-	3032	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	-4	0	3	multi-exon	FALSE	canonical	3	80	junction_2	22.5345413877353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTTCAGCTCATTTG	-39686187	True	NA	1	True	AATAAA	-20	NA	39688057	39671118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
WTC11_00038488	chr17	-	2373	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	-153	0	-153	0	multi-exon	FALSE	canonical	3	5	junction_1	65.4488774201327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39688170	False	NA	-2	True	AATAAA	-17	NA	39688210	39671121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
WTC11_00038494	chr17	-	1411	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	-14	0	0	multi-exon	FALSE	canonical	3	754	junction_3	28.3117564901148	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGATACTGACACCATT	-39723999	True	NA	NA	False	AGTAAA	-29	NA	39730532	39728495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
WTC11_00038495	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723958	True	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729606_39729684_39729762_39730193
WTC11_00038496	chr17	-	808	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	-2	0	0	multi-exon	FALSE	canonical	3	754	junction_2	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723977	True	NA	-6	True	AGTAAA	-20	NA	39730510	39729155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729762_39730193_39730292_39730406
WTC11_00038497	chr17	-	929	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	-4	0	0	multi-exon	FALSE	canonical	3	821	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723983	True	NA	-6	True	AGTAAA	-20	NA	39730516	39729155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729762_39730193
WTC11_00038498	chr17	-	3694	7	FSM	ENSG00000073605.19	ENST00000524039.5	1100	7	-2302	-292	236	75	multi-exon	FALSE	canonical	3	4	junction_4	13.1074618273545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCAGCAGCAGATAAGAA	-39919607	False	NA	75	True	AGTAAA	-41	NA	39919618	39904519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39909755_39909925_39912325_39912498_39917081
WTC11_00038499	chr17	-	2209	4	FSM	ENSG00000073605.19	ENST00000479136.5	2209	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	NA	False	NA	0	True	ATTAAA	-23	NA	39907739	39904594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110
WTC11_00038501	chr17	-	2097	4	FSM	ENSG00000172057.10	ENST00000579695.5	2106	4	9	0	9	0	multi-exon	FALSE	canonical	3	23	junction_3	19.3448241713959	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-39920697	True	NA	-12	True	AATAAA	-22	NA	39927592	39921040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39922686_39923111_39923264_39924029_39924221_39927483
WTC11_00038502	chr17	-	2102	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	9	-2	9	0	multi-exon	FALSE	canonical	3	44	junction_3	9.46337971105226	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-39920697	True	NA	-12	True	AATAAA	-22	NA	39927592	39921040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
WTC11_00038503	chr17	-	4179	25	FSM	ENSG00000008838.21	ENST00000394126.5	3896	25	-283	0	0	0	multi-exon	FALSE	canonical	3	174	junction_20	26.6175328600446	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTGTTGGTATT	-40049908	True	NA	-6	True	AATAAA	-24	NA	40054375	40019096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468
WTC11_00038504	chr17	-	3492	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	-12	0	5	multi-exon	FALSE	canonical	3	90	junction_25	41.7057118390275	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049941	True	NA	-1	True	AATAAA	-29	NA	40054408	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
WTC11_00038505	chr17	-	3472	25	FSM	ENSG00000008838.21	ENST00000394127.6	3456	25	0	-16	0	5	multi-exon	FALSE	canonical	2	4	junction_22	62.3723140147578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049938	True	NA	-1	True	AATAAA	-29	NA	40054405	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40053297_40053381_40053468_40053658_40054360
WTC11_00038506	chr17	-	3452	25	FSM	ENSG00000008838.21	ENST00000356271.7	3446	25	0	-6	0	5	multi-exon	FALSE	canonical	2	4	junction_22	64.8768063332344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049940	True	NA	-1	True	AATAAA	-29	NA	40054407	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40053297_40053381_40053468_40053636_40054360
WTC11_00038508	chr17	-	1994	7	FSM	ENSG00000008838.21	ENST00000422942.6	905	7	-678	-411	-187	5	multi-exon	TRUE	canonical	1	2	junction_3	106.196359008521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40023826	False	NA	-1	True	AATAAA	-29	NA	40023838	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020483_40021954_40022055_40022393_40022485_40022644_40022827_40023130
WTC11_00038511	chr17	-	549	2	FSM	ENSG00000008838.21	ENST00000580720.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATTAAGGTACTTGGG	-40026420	False	NA	NA	False	NA	NA	NA	40026450	40023141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40023396_40026155
WTC11_00038523	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	8.65200224555813	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-40100001	True	NA	-6	True	NA	NA	NA	40100589	40092792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
WTC11_00038524	chr17	-	4830	1	FSM	ENSG00000183153.7	ENST00000578689.2	4086	1	-705	-39	-705	39	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTTTCATCTTAATG	NA	False	NA	NA	False	AATGAA	-41	NA	40365442	40360612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40360600_40365400
WTC11_00038525	chr17	-	5733	36	NNC	ENSG00000131747.15	novel	5695	35	NA	NA	0	10775	intron_retention	TRUE	non_canonical	0	0	junction_1	282.830220941029	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGAATTACCACATTG	-40393709	True	NA	NA	False	NA	NA	NA	40417896	40377749	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40377788_40388524_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
WTC11_00038526	chr17	-	5735	36	NNC	ENSG00000131747.15	novel	5695	35	NA	NA	0	10775	intron_retention	FALSE	non_canonical	0	0	junction_1	282.830220941029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGAATTACCACATTG	-40393709	True	NA	NA	False	NA	NA	NA	40417896	40377749	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40377790_40388524_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
WTC11_00038527	chr17	-	6647	36	NNC	ENSG00000131747.15	novel	5695	35	NA	NA	-913	10775	intron_retention	FALSE	non_canonical	0	0	junction_1	282.830220941029	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGAATTACCACATTG	NA	False	NA	NA	False	NA	NA	NA	40418809	40377749	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40377789_40388524_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
WTC11_00038532	chr17	-	453	1	FSM	ENSG00000240125.1	ENST00000491601.1	451	1	52	-54	52	54	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAGAGAGATGATCC	-40439853	False	NA	NA	False	CATAAA	-4	NA	40439865	40439412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40439400_40439900
WTC11_00038534	chr17	-	2491	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	-3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	416.864982006333	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	-40639966	True	NA	NA	False	AATAAA	-9	NA	40647837	40627718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
WTC11_00038536	chr17	-	2840	10	FSM	ENSG00000073584.20	ENST00000647508.1	2840	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	358.912279939483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	-40648315	False	NA	NA	False	AATAAA	-9	NA	40648370	40627718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
WTC11_00038540	chr17	-	2519	9	FSM	ENSG00000073584.20	ENST00000646448.1	2519	9	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_2	65.6577299333445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTGTTCTAAATA	-40639962	True	NA	29	True	AAAAAG	-15	NA	40647833	40628775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
WTC11_00038541	chr17	-	1973	11	FSM	ENSG00000073584.20	ENST00000447024.6	1973	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	333.802112036458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCCAACAGAAATAAAATG	-40639971	True	NA	NA	False	NA	NA	NA	40647842	40629455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
WTC11_00038546	chr17	-	1403	7	NNC	ENSG00000171345.13	novel	1390	6	NA	NA	0	40696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.518538082413	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGCGG	-41525890	False	NA	NA	False	AATACA	-23	NA	41528299	41482920	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41482946_41523619_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
WTC11_00038547	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_5	79.8298189901493	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-41525899	True	NA	-6	True	AATAAA	-19	NA	41528308	41523616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
WTC11_00038550	chr17	-	5235	10	FSM	ENSG00000173805.16	ENST00000393939.6	5683	10	4	444	3	-444	multi-exon	TRUE	canonical	3	9	junction_4	6.0736223860962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGATATTATAGAAAATTA	-41733816	True	NA	NA	False	NA	NA	NA	41734640	41721256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
WTC11_00038552	chr17	-	3200	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	75.8590597013667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773334	True	NA	-1	True	AATAAA	-19	NA	41786698	41754603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
WTC11_00038553	chr17	-	3510	14	FSM	ENSG00000173801.17	ENST00000393931.8	3505	14	0	-5	0	0	multi-exon	FALSE	canonical	3	277	junction_13	66.7112474215884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773347	True	NA	-1	True	AATAAA	-19	NA	41786711	41754603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
WTC11_00038554	chr17	-	3193	15	NIC	ENSG00000173801.17	novel	3200	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_14	131.354579327118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGGCTGTTTAGGGGA	-41773334	True	NA	-5	True	AATAAA	-15	NA	41786698	41754607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771860_41786587
WTC11_00038555	chr17	-	3207	15	NNC	ENSG00000173801.17	novel	3200	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	141.42359298597	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGGCTGTTTAGGGGA	-41773348	True	NA	-5	True	AATAAA	-15	NA	41786712	41754607	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763319_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
WTC11_00038567	chr17	-	4328	29	NNC	ENSG00000131473.17	novel	4309	29	NA	NA	0	45805	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	432.619088240688	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTCTCAGCCCCTC	-41882163	True	NA	NA	False	NA	NA	NA	41918983	41821111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41821141_41866917_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
WTC11_00038569	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	133.413829867821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-41828019	True	NA	NA	False	NA	NA	NA	41836232	41825056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
WTC11_00038570	chr17	-	1902	8	FSM	ENSG00000141698.17	ENST00000470690.5	1729	8	25	-198	0	28	multi-exon	FALSE	canonical	3	46	junction_7	175.578809562393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTGGGGCTGAAAGGGTA	-41827990	True	NA	NA	False	NA	NA	NA	41836203	41825028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587
WTC11_00038572	chr17	-	1573	9	FSM	ENSG00000141698.17	ENST00000469698.5	1573	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	218.617102487431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-41827989	True	NA	-3	True	AATATA	-40	NA	41836202	41825180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587_41835683_41835858
WTC11_00038573	chr17	-	1534	8	FSM	ENSG00000141698.17	ENST00000523903.5	1534	8	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_2	35.29641249042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-41828045	True	NA	-3	True	AATATA	-40	NA	41836258	41825180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
WTC11_00038574	chr17	-	1264	7	FSM	ENSG00000141698.17	ENST00000393910.5	1253	7	0	-11	0	0	multi-exon	FALSE	canonical	3	27	junction_2	196.61107971492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-41827984	True	NA	-49	True	TTTAAA	-17	NA	41836197	41825226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
WTC11_00038583	chr17	-	7407	2	FSM	ENSG00000178502.6	ENST00000319121.4	7402	2	0	-5	0	5	multi-exon	FALSE	canonical	3	33	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGTGTGACTTTTT	-41864091	True	NA	0	True	AATAAA	-20	NA	41865423	41848512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41855322_41864825
WTC11_00038585	chr17	-	4311	29	FSM	ENSG00000131473.17	ENST00000590151.5	4309	29	0	-2	0	2	multi-exon	FALSE	canonical	3	423	junction_28	339.731196262995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGGCATCCAT	-41882142	True	NA	-14	True	AATAAA	-26	NA	41918962	41866914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
WTC11_00038590	chr17	-	1708	13	FSM	ENSG00000168259.17	ENST00000316603.12	1713	13	0	5	0	-5	multi-exon	FALSE	canonical	2	25	junction_12	221.277101290566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCATCTGCATTGTCTC	-42007885	True	NA	-7	True	AATAAA	-28	NA	42017421	41976425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42017339
WTC11_00038591	chr17	-	1815	14	FSM	ENSG00000168259.17	ENST00000457167.9	1806	14	0	-9	0	-5	multi-exon	FALSE	canonical	3	572	junction_13	93.9215334088505	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCATCTGCATTGTCTC	-42007903	True	NA	-7	True	AATAAA	-28	NA	42017439	41976425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
WTC11_00038592	chr17	-	1343	11	FSM	ENSG00000168259.17	ENST00000674355.1	1320	11	0	-23	0	0	multi-exon	FALSE	canonical	2	7	junction_2	239.150245661592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-42000519	False	NA	-38	True	ATTAAA	-20	NA	42000529	41976456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481
WTC11_00038593	chr17	-	1796	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	-22	0	0	multi-exon	FALSE	canonical	3	56	junction_13	209.428752483664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-42014387	False	9536	-38	True	ATTAAA	-20	NA	42017151	41976456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
WTC11_00038594	chr17	-	1898	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	-22	0	0	multi-exon	FALSE	canonical	3	19	junction_5	273.63005712689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCTCTGGCATCTG	-42007895	True	NA	-16	True	AATAAA	-19	NA	42017431	41976434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
WTC11_00038599	chr17	-	1707	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	-15	0	0	multi-exon	FALSE	canonical	3	182	junction_13	178.367879932784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42015762	True	NA	-28	True	NA	NA	NA	42018526	41976522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
WTC11_00038601	chr17	-	1758	2	FSM	ENSG00000187595.17	ENST00000496039.5	2072	2	314	0	314	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-42027562	False	NA	0	True	AATAAA	-17	NA	42027817	42025575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42027134_42027617
WTC11_00038602	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.33999733546454	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-42028434	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
WTC11_00038604	chr17	-	779	3	FSM	ENSG00000108771.13	ENST00000589979.1	782	3	0	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGGTGTCTTAATT	-42104799	False	NA	-3	True	AATAAA	-18	NA	42104907	42101406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42101947_42102215_42102313_42104765
WTC11_00038605	chr17	-	1329	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	56	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	12.9089116504839	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGGTGTCTTAATT	-42107684	True	NA	-3	True	AATAAA	-18	NA	42107792	42101406	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
WTC11_00038607	chr17	-	3013	18	FSM	ENSG00000108773.11	ENST00000465682.5	2990	18	0	-23	0	16	multi-exon	TRUE	canonical	3	102	junction_12	29.0298736479138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCCCAGCCTTAGCAGG	-42120980	False	NA	14	True	AATAAA	-35	NA	42121058	42113094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
WTC11_00038608	chr17	-	3131	18	FSM	ENSG00000108773.11	ENST00000225916.10	3115	18	0	-16	0	16	multi-exon	FALSE	canonical	3	68	junction_12	35.4885819154102	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCCCAGCCTTAGCAGG	-42118634	True	NA	14	True	AATAAA	-35	NA	42121367	42113094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
WTC11_00038610	chr17	-	404	5	FSM	ENSG00000108773.11	ENST00000588759.1	404	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	87.5985159691647	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTGGGGAGACCAGGT	-42115765	False	NA	NA	False	NA	NA	NA	42115833	42114223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42114283_42114357_42114395_42114489_42114605_42114953_42115036_42115722
WTC11_00038611	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	31.6455368101096	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-42141450	True	NA	-3	True	AATATA	-23	NA	42154989	42124978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
WTC11_00038612	chr17	-	721	4	FSM	ENSG00000108774.15	ENST00000550406.1	500	4	-47	-174	6	-19	multi-exon	FALSE	canonical	3	19	junction_3	327.396803079484	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCGCTTAACCCTCTGT	-42141472	True	NA	NA	False	NA	NA	NA	42155011	42128569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42128801_42130336_42130591_42137761_42137879_42154892
WTC11_00038613	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	2.49443825784929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-42193837	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
WTC11_00038614	chr17	-	757	3	FSM	ENSG00000167925.16	ENST00000585735.1	940	3	0	183	0	-183	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGAGATCAGGGCTG	-42190413	False	NA	NA	False	NA	NA	NA	42191070	42190125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42190758_42190831_42190904_42191017
WTC11_00038618	chr17	-	1337	2	FSM	ENSG00000236194.3	ENST00000597755.2	1496	2	116	43	116	-43	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTGGAAATTATATTAA	-42272557	False	NA	NA	False	ATTAAA	-10	NA	42272567	42270559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42271773_42272443
WTC11_00038621	chr17	-	4888	24	FSM	ENSG00000168610.16	ENST00000678044.1	4912	24	119	-95	0	7	multi-exon	FALSE	canonical	3	93	junction_23	107.933274213375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGCTCTGTTTGGCTG	-42377152	True	NA	-5	True	AATAAA	-26	NA	42388421	42313316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
WTC11_00038622	chr17	-	4929	24	FSM	ENSG00000168610.16	ENST00000264657.10	4921	24	0	-8	0	8	multi-exon	FALSE	canonical	3	344	junction_23	68.649048583761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGCTCTGTTTGGCTGG	-42377173	True	NA	-4	True	AATAAA	-27	NA	42388442	42313315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
WTC11_00038623	chr17	-	4950	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	44	-104	0	7	multi-exon	FALSE	canonical	3	162	junction_3	103.265748168507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGCTCTGTTTGGCTG	-42377198	True	NA	-5	True	AATAAA	-26	NA	42388467	42313316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
WTC11_00038636	chr17	-	4800	24	FSM	ENSG00000168610.16	ENST00000678827.1	4800	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	130.913252855305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	-42388530	True	NA	-87	True	NA	NA	NA	42388540	42313470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
WTC11_00038638	chr17	-	3325	24	FSM	ENSG00000168610.16	ENST00000585517.5	3319	24	0	-6	0	0	multi-exon	FALSE	canonical	3	62	junction_2	144.080278504951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTAACAGCCTCCTT	-42377170	True	NA	NA	False	AAAAAG	-4	NA	42388439	42314847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
WTC11_00038640	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	116.750505477709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-42377145	True	NA	-4	True	AATAGA	-13	NA	42388414	42315558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
WTC11_00038645	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-42421633	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42405389_42422626
WTC11_00038646	chr17	-	873	2	Genic_Genomic	ENSG00000266962.2	novel	2313	1	NA	NA	1473	6203	multi-exon	TRUE	canonical	3	64	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTCTAATCTGATTGTG	-42553265	False	NA	NA	False	NA	NA	NA	42553275	42546232	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_42546398_42552567
WTC11_00038647	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	-42552235	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42552400_42554700
WTC11_00038648	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_7	67.1686880403453	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572221	True	NA	-1	True	AATAAA	-17	NA	42577729	42572309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
WTC11_00038649	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	43.1380213835647	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	-42572189	True	NA	-34	True	NA	NA	NA	42577697	42572342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
WTC11_00038652	chr17	-	902	8	FSM	ENSG00000131470.15	ENST00000588544.5	902	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	143.512070174304	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	42577795	42572961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577079_42577303_42577460_42577562_42577652
WTC11_00038654	chr17	-	3751	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	-2	0	0	multi-exon	FALSE	canonical	3	139	junction_6	17.4839211849059	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAGACTGATGCTGAA	-42604951	True	NA	-8	True	AATAAA	-19	NA	42609374	42579512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
WTC11_00038661	chr17	-	3034	13	FSM	ENSG00000068137.15	ENST00000591022.6	3026	13	0	-8	0	8	multi-exon	FALSE	canonical	3	84	junction_4	28.0431215571068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGTGTTATTCAGTGG	-42676543	True	NA	52	True	AAAAAG	-26	NA	42676994	42667905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
WTC11_00038662	chr17	-	2987	13	FSM	ENSG00000068137.15	ENST00000293349.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	34.154876014349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTTCTTA	-42676543	True	NA	14	True	NA	NA	NA	42676994	42667943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
WTC11_00038663	chr17	-	4652	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	-14	-5	-5	5	multi-exon	FALSE	canonical	3	21	junction_20	9.15478017212866	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGTGTACTGTGTGC	-42743473	True	NA	-2	True	AATAAA	-19	NA	42745054	42700269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
WTC11_00038671	chr17	-	799	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	0	64659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATACTTCTTTAAAA	-42785819	True	NA	NA	False	NA	NA	NA	42798704	42730487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42730516_42797633_42798168_42798467
WTC11_00038672	chr17	-	270	1	FSM	ENSG00000214578.5	ENST00000585707.1	270	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGTGCATTTTTGA	-42753744	False	NA	-99	True	AAAACA	-40	NA	42753799	42753529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42753500_42753800
WTC11_00038673	chr17	-	2459	5	FSM	ENSG00000214578.5_ENSG00000197291.9	ENST00000589716.5	1985	5	-90	-384	-90	0	multi-exon	FALSE	canonical	2	4	junction_3	3.08220700148449	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGTGCATTTTTGA	-42761292	True	NA	-99	True	AAAACA	-40	NA	42761347	42753529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42755214_42759738_42759881_42760425_42760514_42760634_42760712_42760879
WTC11_00038674	chr17	-	1174	3	Fusion	ENSG00000197291.9_ENSG00000214578.5_ENSG00000183978.8	novel	780	2	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	715.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGTGCATTTTTGA	-42785819	True	NA	-99	True	AAAACA	-40	NA	42798704	42753529	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_42753933_42797633_42798168_42798467
WTC11_00038677	chr17	-	795	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	0	31245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGCTC	-42785819	True	NA	NA	False	NA	NA	NA	42798704	42763901	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42763926_42797633_42798168_42798467
WTC11_00038678	chr17	-	897	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	-17	-100	-17	100	multi-exon	FALSE	canonical	3	1431	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAATTACTTTTTCCATG	-42785836	True	NA	NA	False	NA	NA	NA	42798721	42797524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42798168_42798467
WTC11_00038679	chr17	-	2115	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_7	147.637931026163	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCACTGTTGGGTTTTTC	-42817841	True	NA	-7	True	AATAAA	-31	NA	42824282	42810127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
WTC11_00038680	chr17	-	2119	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	-7	0	7	multi-exon	TRUE	canonical	0	0	junction_7	152.474791304894	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTGTTGGGTTTTTCT	-42817822	True	NA	-6	True	AATAAA	-32	NA	42824263	42810126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
WTC11_00038681	chr17	-	1964	11	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	186.971361443404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGGGGTGCACTGTTG	-42817819	True	NA	-15	True	AATAAA	-23	NA	42824260	42810135	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
WTC11_00038682	chr17	-	1901	10	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	198.749671946309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGGGGTGCACTGTTG	-42817817	True	NA	-15	True	AATAAA	-23	NA	42824258	42810135	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
WTC11_00038685	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	154.312831611632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-42817846	True	NA	NA	False	NA	NA	NA	42824287	42810413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
WTC11_00038691	chr17	-	570	2	FSM	ENSG00000126581.13	ENST00000590852.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTAAACATGGATTCAA	-42809530	False	NA	NA	False	AATAAA	-24	NA	42815971	42814167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42814674_42815907
WTC11_00038697	chr17	-	662	2	FSM	ENSG00000266967.7	ENST00000587023.5	539	2	-81	-42	-81	42	multi-exon	FALSE	canonical	3	356	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCCATTGTGCTTGTG	-42952200	False	NA	30	True	NA	NA	NA	42952216	42950483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799
WTC11_00038700	chr17	-	662	5	FSM	ENSG00000266967.7	ENST00000591096.5	562	5	0	-100	0	100	multi-exon	FALSE	canonical	3	45	junction_2	131.675738084128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGCACTGTAATGT	-42952368	False	NA	88	True	TATAAA	-18	NA	42955946	42950425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42954875_42954968_42955157_42955225_42955841
WTC11_00038701	chr17	-	1420	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	-100	0	100	multi-exon	FALSE	canonical	3	269	junction_11	34.5739117240272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGCACTGTAATGT	-42960876	True	NA	88	True	TATAAA	-18	NA	42964454	42950425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
WTC11_00038702	chr17	-	2042	18	FSM	ENSG00000108825.18	ENST00000409399.6	2042	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	156.131499008685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	-42980410	True	NA	-16	True	AATAAA	-13	NA	42980490	42950529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045_42980276_42980365
WTC11_00038703	chr17	-	2148	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	22	-20	-16	0	multi-exon	FALSE	canonical	3	11	junction_16	152.296175263859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	-42980480	False	NA	-16	True	AATAAA	-13	NA	42980506	42950529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
WTC11_00038704	chr17	-	418	2	FSM	ENSG00000266967.7	ENST00000483535.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAACTGTGTTGGGCT	-42951878	False	NA	NA	False	NA	NA	NA	42955456	42954848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42954968_42955157
WTC11_00038709	chr17	-	766	7	FSM	ENSG00000266967.7	ENST00000430739.5	752	7	0	-14	0	0	multi-exon	FALSE	canonical	3	26	junction_6	109.88731602065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGTCATGGAACTG	NA	False	NA	NA	False	NA	NA	NA	42964498	42955886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964442
WTC11_00038712	chr17	-	1546	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_6	7.08088192874933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTGAACTCATGGT	-42979894	True	NA	-10	True	AATAAA	-17	NA	42980080	42968099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
WTC11_00038714	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	TRUE	canonical	3	1291	junction_5	72.9421688737043	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-43010759	True	NA	-20	True	AATAAA	-14	NA	43022385	43014606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
WTC11_00038715	chr17	-	1174	6	FSM	ENSG00000108828.16	ENST00000587173.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	542.170231569384	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACCTCTGAAGAGGTTG	-43010730	True	NA	NA	False	NA	NA	NA	43022356	43015898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43022139
WTC11_00038718	chr17	-	7194	23	FSM	ENSG00000012048.23	ENST00000357654.9	7088	23	-106	0	13	0	multi-exon	FALSE	canonical	3	30	junction_22	19.541067160857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43125395	True	NA	-5	True	AATAAA	-21	NA	43125470	43044294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
WTC11_00038719	chr17	-	7089	23	NIC	ENSG00000012048.23	novel	7088	23	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	30	junction_22	21.2276620559975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTGTTCTTGAGACT	-43122645	True	NA	-1	True	AATAAA	-25	NA	43125364	43044290	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
WTC11_00038732	chr17	-	827	3	NIC	ENSG00000267002.4	novel	1782	4	NA	NA	40	-23	combination_of_known_splicesites	TRUE	canonical	1	3	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAAACTATTGCTCAC	-43169773	True	NA	-24	True	TATAAA	-38	NA	43170276	43148390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43148784_43166979_43167263_43170125
WTC11_00038734	chr17	-	683	2	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGGTGAGCGGTGGC	NA	False	NA	NA	False	NA	NA	NA	43255169	43249040	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_43249262_43254707
WTC11_00038735	chr17	-	300	1	FSM	ENSG00000278774.1	ENST00000613956.1	192	1	14	-122	14	122	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTTCCTGATGTGCGG	NA	False	NA	NA	False	NA	NA	NA	43273278	43272978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43273000_43273300
WTC11_00038736	chr17	-	635	2	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCGTGGTGCTGCCCGTC	NA	False	NA	NA	False	AAAAAG	-6	NA	43294741	43287970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_43288288_43294423
WTC11_00038737	chr17	-	1185	3	FSM	ENSG00000188825.15	ENST00000663186.1	1186	3	1	0	1	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAAGCTGTCTCTCCT	-43356032	False	NA	NA	False	ATTAAA	-23	NA	43356530	43338740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43339505_43341177_43341460_43356391
WTC11_00038738	chr17	-	498	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	778	45	778	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCACCACTTTACTTT	-43360466	False	NA	NA	False	NA	NA	NA	43360583	43360085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43360100_43360600
WTC11_00038740	chr17	-	2440	14	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	-77	68112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	342.648404336111	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTAGTGGAGCTGAAGC	-43546381	False	NA	NA	False	NA	NA	NA	43546417	43459731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43459757_43527842_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
WTC11_00038741	chr17	-	2334	14	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	0	6879	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	342.648404336111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACATCAAGCATTGGAA	-43540441	True	NA	NA	False	NA	NA	NA	43546315	43520964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43520990_43527846_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
WTC11_00038742	chr17	-	2184	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	-2	0	0	multi-exon	FALSE	canonical	3	746	junction_11	143.905961029537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545635	False	NA	-4	True	AATAAA	-20	NA	43545671	43527843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
WTC11_00038743	chr17	-	2337	13	FSM	ENSG00000175832.13	ENST00000319349.10	2335	13	0	-2	0	0	multi-exon	FALSE	canonical	3	500	junction_12	211.949614033357	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43540466	True	NA	-4	True	AATAAA	-20	NA	43546340	43527843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
WTC11_00038750	chr17	-	4097	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	-2	0	2	multi-exon	FALSE	canonical	3	163	junction_1	16	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTTTTTGTCCTTCT	-43775069	True	NA	NA	False	AATAAA	-19	NA	43778977	43766122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43769815_43774711_43774939_43778799
WTC11_00038751	chr17	-	1296	4	NIC	ENSG00000108861.9	novel	4095	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-43775067	True	NA	NA	False	AATAAA	-17	NA	43778975	43766124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
WTC11_00038752	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.29197089312436	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-43832625	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
WTC11_00038753	chr17	-	328	3	FSM	ENSG00000161647.19	ENST00000466083.5	328	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTCTAAGCAAGCAT	NA	False	NA	NA	False	NA	NA	NA	43814394	43811156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43811206_43814010_43814092_43814196
WTC11_00038756	chr17	-	580	3	FSM	ENSG00000131096.11	ENST00000592796.2	728	3	0	148	0	-148	multi-exon	FALSE	canonical	3	12	junction_1	1	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAACCCGGATTCTGCC	-43953865	True	NA	NA	False	NA	NA	NA	43953940	43952888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43953190_43953295_43953484_43953849
WTC11_00038759	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	61.5589148702282	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-44049403	True	NA	-1	True	AGTAAA	-18	NA	44066671	44034327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
WTC11_00038764	chr17	-	5326	27	FSM	ENSG00000108840.16	ENST00000225983.10	5326	27	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_25	71.2416090771771	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGTCTCTATTCTCTG	-44118641	True	NA	-3	True	AATAAA	-26	NA	44123638	44076745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110804_44117493_44117705_44123503
WTC11_00038769	chr17	-	2092	3	FSM	ENSG00000267080.7	ENST00000667684.1	1853	3	20	-259	0	6	multi-exon	FALSE	canonical	3	28	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCTTTCTGTCCCCA	-44185534	True	NA	-8	True	AATAAA	-12	NA	44186703	44175961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44177817_44181622_44181721_44186564
WTC11_00038770	chr17	-	2263	4	FSM	ENSG00000267080.7	ENST00000585457.6	2249	4	0	-14	0	9	multi-exon	FALSE	canonical	3	20	junction_2	3.29983164553722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTGTCCCCACAC	-44185538	True	NA	-5	True	AATAAA	-15	NA	44186707	44175958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44177817_44181622_44181721_44182929_44183094_44186564
WTC11_00038772	chr17	-	3523	12	FSM	ENSG00000087152.16	ENST00000454077.6	3523	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	42.371439000525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-44198027	False	NA	-14	True	AATAAA	-19	NA	44198070	44191804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196101_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
WTC11_00038773	chr17	-	4775	12	FSM	ENSG00000087152.16	ENST00000389384.8	3811	12	-964	0	-137	0	multi-exon	FALSE	canonical	3	95	junction_10	28.7637857713623	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-44199300	False	NA	-14	True	AATAAA	-19	NA	44199343	44191804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
WTC11_00038778	chr17	-	4771	19	FSM	ENSG00000108312.15	ENST00000526094.5	2459	19	-112	-2200	-74	0	multi-exon	FALSE	canonical	3	215	junction_13	68.855032002743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-44218494	False	NA	-13	True	AATAAA	-13	NA	44218614	44205039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
WTC11_00038781	chr17	-	5008	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	-11	0	11	multi-exon	TRUE	canonical	3	62	junction_20	121.20948807746	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGGAATCAATGAAGGT	-44221506	False	120	5	True	AATAAA	-31	NA	44221626	44205021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
WTC11_00038790	chr17	-	1588	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	-7	0	4	multi-exon	FALSE	canonical	3	667	junction_8	627.020726719251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCCCTCTGGGGCCT	-44298524	True	NA	NA	False	NA	NA	NA	44324823	44319620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
WTC11_00038792	chr17	-	867	4	FSM	ENSG00000013306.16	ENST00000592372.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_2	178.389710714741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCTGGTGTAGTCTC	-44321115	False	135	55	True	NA	NA	NA	44321147	44319690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320437_44320621_44320732_44321057
WTC11_00038801	chr17	-	3139	8	FSM	ENSG00000161682.15	ENST00000293443.12	3138	8	0	-1	0	1	multi-exon	TRUE	canonical	3	100	junction_5	15.2636690162207	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTATGTCTTTCTGTG	-44361317	True	NA	0	True	TATAAA	-16	NA	44363853	44353213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44355192_44355714_44355842_44355957_44356075_44356172_44356353_44356429_44356589_44359578_44359672_44359904_44360133_44363596
WTC11_00038802	chr17	-	1066	7	FSM	ENSG00000161682.15	ENST00000589407.5	1066	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	53.7246064046386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGCTGGTAAGAGTAGT	-44361276	True	NA	NA	False	NA	NA	NA	44363812	44355966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44356075_44356172_44356353_44356429_44356589_44359061_44359144_44359578_44359672_44359904_44360133_44363596
WTC11_00038803	chr17	-	964	6	FSM	ENSG00000161682.15	ENST00000588067.1	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	55.4422221776869	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGCTGACAGGTAATGG	-44361298	True	NA	NA	False	NA	NA	NA	44363834	44356305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44356353_44356429_44356589_44358944_44359144_44359578_44359672_44359904_44360133_44363596
WTC11_00038804	chr17	-	776	3	FSM	ENSG00000161682.15	ENST00000592560.1	758	3	0	-18	0	18	multi-exon	FALSE	canonical	3	129	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTCTCCATCTATTCC	-44361264	True	NA	NA	False	AATAAA	-30	NA	44363800	44359327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44359672_44359904_44360133_44363596
WTC11_00038806	chr17	-	2454	15	FSM	ENSG00000005961.19	ENST00000592462.5	3189	15	0	735	0	-735	multi-exon	FALSE	canonical	3	30	junction_4	14.9497457489813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGGGGGATGGAG	-44383117	False	NA	NA	False	NA	NA	NA	44383497	44374658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492
WTC11_00038807	chr17	-	6838	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	-6	0	6	multi-exon	TRUE	canonical	3	84	junction_2	13.5631553730491	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTGTCGTAATTGTTG	-44498750	True	NA	2	True	AATAAA	-24	NA	44503406	44395274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
WTC11_00038810	chr17	-	465	1	FSM	ENSG00000283045.1	ENST00000634783.1	663	1	47	151	47	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTGGGCAACACAGGC	NA	False	NA	NA	False	NA	NA	NA	44486768	44486303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44486300_44486800
WTC11_00038811	chr17	-	2103	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	-45	0	45	multi-exon	FALSE	non_canonical	0	0	junction_1	148.041285532861	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTGTGAGTAGTTAC	-44684903	True	NA	36	True	NA	NA	NA	44689779	44677394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
WTC11_00038812	chr17	-	2159	5	FSM	ENSG00000180329.14	ENST00000315286.13	2114	5	0	-45	0	45	multi-exon	FALSE	canonical	0	0	junction_2	130.616566713415	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTGTGAGTAGTTAC	-44684900	True	NA	36	True	NA	NA	NA	44689776	44677394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44679044_44680584_44680644_44682002_44682139_44683871_44683960_44689549
WTC11_00038814	chr17	-	7692	3	FSM	ENSG00000182963.11	ENST00000592524.6	7692	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	40.5	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTTTGTGTTTCCTT	-44825888	True	NA	-6	True	AATACA	-15	NA	44830287	44798447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44805838_44807393_44807470_44830061
WTC11_00038817	chr17	-	3595	11	FSM	ENSG00000108883.13	ENST00000586276.5	3678	11	83	0	83	0	multi-exon	FALSE	canonical	3	903	junction_7	71.1497716089096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCAGCCTCCTTCCTGC	-44863491	False	NA	-6	True	AATATA	-37	NA	44863512	44850809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860544_44862712
WTC11_00038818	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_23	204.343621140191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-44882016	True	NA	-62	True	NA	NA	NA	44899431	44850865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
WTC11_00038819	chr17	-	1955	8	FSM	ENSG00000108883.13	ENST00000590977.5	2422	8	468	-1	468	0	multi-exon	FALSE	canonical	3	20	junction_3	371.271835061864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTTGCTCTGCTC	-44859160	False	NA	-112	True	NA	NA	NA	44859181	44850915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853516_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079
WTC11_00038827	chr17	-	865	3	FSM	ENSG00000131095.14	ENST00000586125.2	2542	3	0	1677	0	-74	multi-exon	FALSE	canonical	2	3	junction_2	1	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCATTAAGGAGTCCAAG	-44911199	False	NA	NA	False	NA	NA	NA	44911297	44907390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44908150_44910614_44910659_44911235
WTC11_00038829	chr17	-	4090	16	FSM	ENSG00000186185.14	ENST00000593135.6	4088	16	0	-2	0	0	multi-exon	TRUE	canonical	3	12	junction_7	46.7653242857949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	-44943798	True	NA	-2	True	AATAAA	-17	NA	44947773	44924708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932207_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
WTC11_00038830	chr17	-	581	3	FSM	ENSG00000186185.14	ENST00000585687.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	9.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCACAGAGATCCCACCC	-44933645	False	NA	NA	False	NA	NA	NA	44933976	44932321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44932774_44932911_44932987_44933922
WTC11_00038831	chr17	-	1527	2	FSM	ENSG00000131094.4	ENST00000253407.4	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTTCAGTCTGTGCCCT	-44967717	True	NA	-1	True	AATAAA	-18	NA	44968303	44959692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44960368_44967451
WTC11_00038832	chr17	-	2431	4	FSM	ENSG00000172992.13	ENST00000692009.1	2452	4	28	-7	28	5	multi-exon	FALSE	canonical	3	144	junction_1	9.89949493661167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGCTTCTTCCCACA	NA	False	NA	-2	True	AATAAA	-41	NA	45035520	45023332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773
WTC11_00038833	chr17	-	1963	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	-6	5	0	multi-exon	FALSE	canonical	3	49	junction_4	47.5447157947127	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGACTTGGCTTCTTC	-45047273	True	NA	-7	True	AATAAA	-36	NA	45051610	45023337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
WTC11_00038834	chr17	-	2183	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	0	-12	0	6	multi-exon	FALSE	canonical	0	0	junction_4	68.521438251105	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCTTCTTCCCACAC	-45047295	True	NA	-1	True	AATAAA	-42	NA	45051632	45023331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
WTC11_00038835	chr17	-	2093	5	FSM	ENSG00000172992.13	ENST00000342350.10	2149	5	56	0	5	0	multi-exon	FALSE	canonical	3	28	junction_4	56.5127198071372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGACTTGGCTTCTTC	-45059403	True	NA	-7	True	AATAAA	-36	NA	45061075	45023337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45060887
WTC11_00038838	chr17	-	560	3	FSM	ENSG00000161714.12	ENST00000546350.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	5.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCACCTCCAAGATTCTC	-45119079	False	NA	NA	False	NA	NA	NA	45119089	45118055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45118139_45118290_45118493_45118814
WTC11_00038839	chr17	-	347	2	FSM	ENSG00000161714.12	ENST00000542173.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGGAGAGACATGGGCT	-45118912	False	NA	NA	False	NA	NA	NA	45118922	45118253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45118493_45118814
WTC11_00038840	chr17	-	1528	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	217	-4	217	4	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTTCTTTTTATTCCCA	-45148243	False	NA	NA	False	NA	NA	NA	45148253	45146725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45146700_45148300
WTC11_00038841	chr17	-	472	3	NNC	ENSG00000233483.3	novel	1086	8	NA	NA	2	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTGCGGGTGGCTGC	-45248170	False	NA	1	True	AGTAAA	-17	NA	45248337	45247363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_45247517_45247882_45248049_45248184
WTC11_00038844	chr17	-	3632	17	FSM	ENSG00000159314.12	ENST00000376922.6	3628	17	0	-4	0	-3	multi-exon	TRUE	canonical	3	26	junction_11	9.72753822917186	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTGTCTTGATAA	-45425328	True	NA	-4	True	AATAAA	-22	NA	45425631	45393904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
WTC11_00038845	chr17	-	4239	17	FSM	ENSG00000159314.12	ENST00000428638.5	4242	17	0	3	0	-3	multi-exon	FALSE	canonical	3	7	junction_16	12.3666322719647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTGTCTTGATAA	NA	False	NA	-4	True	AATAAA	-22	NA	45430297	45393904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45429622
WTC11_00038846	chr17	-	372	2	FSM	ENSG00000159314.12	ENST00000590026.1	372	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCCTGCCACACAAGCTG	NA	False	NA	NA	False	NA	NA	NA	45395908	45395426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743
WTC11_00038847	chr17	-	2605	16	FSM	ENSG00000159314.12	ENST00000532891.6	2604	16	0	-1	0	0	multi-exon	FALSE	canonical	3	7	junction_15	13.0571393838348	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGTGACTGGGGC	NA	False	NA	NA	False	NA	NA	NA	45430279	45395454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45429622
WTC11_00038849	chr17	-	3292	11	FSM	ENSG00000225190.11	ENST00000581448.5	3292	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	9.67729300992793	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTTTTTCCCATTCAT	-45489596	True	NA	-28	True	ATTAAA	-17	NA	45490729	45437470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45437970_45439476_45439635_45440162_45440227_45445469_45445664_45450617_45450764_45453354_45454273_45458168_45458440_45475099_45475727_45477899_45478148_45482436_45482526_45490651
WTC11_00038852	chr17	-	8816	13	NNC	ENSG00000214425.9	novel	5372	14	NA	NA	-1431	1566	intron_retention	FALSE	canonical	3	11	junction_1	34.1771325433965	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCGATATCTGATTAGG	NA	False	NA	NA	False	AATAAA	-22	NA	45586136	45505174	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_45508161_45508266_45508540_45510243_45510294_45513184_45513290_45513867_45515526_45517177_45517283_45517860_45519519_45521306_45521426_45539162_45539244_45539891_45539964_45542763_45542836_45545604_45545677_45584571
WTC11_00038853	chr17	-	3243	4	FSM	ENSG00000214425.9	ENST00000579913.5	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	20.8859335970941	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAAAATTAGCCGGGC	NA	False	NA	NA	False	ACTAAA	-3	NA	45515156	45506740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45508540_45510243_45510294_45513184_45513290_45513867
WTC11_00038854	chr17	-	482	1	FSM	ENSG00000278770.1	ENST00000585071.2	281	1	-81	-120	-81	120	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCAGGCTGGAGTAC	NA	False	NA	NA	False	CATAAA	-32	NA	45526827	45526345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45526300_45526800
WTC11_00038855	chr17	-	1824	1	FSM	ENSG00000263503.1	ENST00000580257.1	1472	1	42	-394	42	394	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACCTGCAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	45602298	45600474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45600500_45602300
WTC11_00038856	chr17	-	5575	15	FSM	ENSG00000120071.15	ENST00000432791.7	5574	15	0	-1	0	1	multi-exon	FALSE	canonical	2	14	junction_14	23.2919579709918	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTACCAGGCCTTTCT	-46192248	True	NA	-7	True	AATAAA	-18	NA	46193429	46029914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
WTC11_00038865	chr17	-	8043	1	NIC	ENSG00000120071.15	novel	1724	5	NA	NA	9946	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAACTAAAATGCGTTG	-46161253	False	NA	NA	False	NA	NA	NA	46161277	46153234	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46153200_46161300
WTC11_00038867	chr17	-	963	1	FSM	ENSG00000262539.1	ENST00000571422.1	1056	1	75	18	75	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGCATGGTTAAACAGTG	NA	False	NA	NA	False	GGGGCT	-7	NA	46260531	46259568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46259600_46260500
WTC11_00038868	chr17	-	2361	5	NIC	ENSG00000228696.10	novel	5240	4	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	116.754014920259	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCCAGTTTCTAAAATT	NA	False	NA	NA	False	AATAAA	-24	NA	46361718	46309499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46311276_46339508_46339775_46352819_46352931_46358249_46358415_46361675
WTC11_00038869	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	93.6919820475584	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	46361718	46330452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
WTC11_00038871	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	58.7669597270061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
WTC11_00038873	chr17	-	1084	6	NNC	ENSG00000185829.18	novel	798	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	130.29658475954	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATCTCTCTTGCTTGG	-46579670	False	NA	NA	False	AATAAA	-21	NA	46579691	46516702	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_46517014_46517093_46517234_46557364_46557631_46570758_46570870_46576174_46576340_46579600
WTC11_00038878	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	61.4220373047546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	-46579670	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
WTC11_00038881	chr17	-	1098	1	FSM	ENSG00000179673.5	ENST00000322329.5	1098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCGCCTGTGAGGTGTGT	-46978894	True	NA	-6	True	AATAAA	-33	NA	46979253	46978155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46978200_46979300
WTC11_00038882	chr17	-	10221	3	FSM	ENSG00000262879.6	ENST00000573341.6	5940	3	-36	-4245	5	1092	multi-exon	FALSE	canonical	2	7	junction_1	8	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAGGTGTGGGAAAAAG	-47099064	True	NA	NA	False	NA	NA	NA	47100284	47047070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47056754_47072471_47072560_47099834
WTC11_00038883	chr17	-	1363	2	FSM	ENSG00000262879.6	ENST00000574741.1	836	2	-47	-480	3	480	multi-exon	FALSE	canonical	3	8	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTGTTTTCTCTATAA	-47099066	True	NA	87	True	NA	NA	NA	47100286	47081439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47082351_47099834
WTC11_00038884	chr17	-	5762	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	-3183	0	6	multi-exon	FALSE	canonical	3	99	junction_8	23.2893765852243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGAATACCTTTTTTC	-47186817	True	NA	3	True	AATAAA	-24	NA	47189224	47117696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
WTC11_00038885	chr17	-	5820	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	-85	-2558	0	6	multi-exon	FALSE	canonical	2	7	junction_11	42.6695962535907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGAATACCTTTTTTC	-47186854	True	NA	3	True	AATAAA	-24	NA	47189261	47117696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
WTC11_00038886	chr17	-	5836	19	FSM	ENSG00000004897.12	ENST00000066544.8	5830	19	0	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_8	29.411931735183	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGAATACCTTTTTTC	-47186888	True	NA	3	True	AATAAA	-24	NA	47189295	47117696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
WTC11_00038887	chr17	-	3011	18	NIC	ENSG00000004897.12	novel	2579	19	NA	NA	11	-61	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	39.3999982435494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGCAAGAATGCTTTA	-47186833	True	NA	-67	True	NA	NA	NA	47189240	47120315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
WTC11_00038888	chr17	-	2889	17	NIC	ENSG00000004897.12	novel	2570	18	NA	NA	10	-61	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	45.0860288781347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGCAAGAATGCTTTA	-47186834	True	NA	-67	True	NA	NA	NA	47189241	47120315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47181561_47181638_47189145
WTC11_00038893	chr17	-	735	6	NNC	ENSG00000228782.8	novel	473	4	NA	NA	0	24968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.9310817918555	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACTTGGCTGCAAGTG	-47491861	True	NA	NA	False	AAAAAG	-18	NA	47492459	47425599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_47425752_47456683_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
WTC11_00038894	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	69.5333652924184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	-47491861	True	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
WTC11_00038896	chr17	-	626	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	-155	315	-155	-315	multi-exon	FALSE	canonical	3	13	junction_2	3.39934634239519	1228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	-47649547	False	NA	NA	False	NA	NA	NA	47649604	47621841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
WTC11_00038899	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	51.7904431338447	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-47827330	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
WTC11_00038901	chr17	-	1766	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	-21	0	6	multi-exon	FALSE	canonical	3	316	junction_1	25.0094426611674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACTTTATCCCAGGACC	-47838197	True	NA	-3	True	AATAAA	-21	NA	47841173	47837685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
WTC11_00038904	chr17	-	1777	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	13	-11	-3	11	multi-exon	FALSE	canonical	3	248	junction_6	44.0898703407786	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCCCAGGACCAGTGG	-47838300	True	NA	2	True	AATAAA	-26	NA	47841276	47837680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
WTC11_00038906	chr17	-	1403	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	105.335421489678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	-47838285	True	NA	-24	True	NA	NA	NA	47841261	47837706	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
WTC11_00038913	chr17	-	3822	2	FSM	ENSG00000189120.5	ENST00000536300.2	3824	2	0	2	0	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTTTGTGTTCCAGC	-47851034	True	NA	-6	True	AATAAA	-17	NA	47851163	47844909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47848487_47850918
WTC11_00038914	chr17	-	503	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	45	9	0	1	multi-exon	FALSE	canonical	3	27	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCATAACTGGTGCT	-47895498	True	NA	NA	False	ATTAAA	-44	NA	47895792	47891227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47891582_47893899_47893959_47895702
WTC11_00038917	chr17	-	2393	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	29	0	29	0	multi-exon	FALSE	canonical	3	13	junction_4	219.942606149877	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-48101152	False	33208	-1	True	AATAAA	-23	NA	48101169	48070051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
WTC11_00038922	chr17	-	234	1	FSM	ENSG00000248278.1	ENST00000504438.1	285	1	171	-120	171	66	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTGTTCTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	48875027	48874793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48874800_48875000
WTC11_00038924	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	518.534315869928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	-48934254	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
WTC11_00038925	chr17	-	1901	2	FSM	ENSG00000159210.10	ENST00000504000.1	1899	2	0	-2	0	0	multi-exon	FALSE	canonical	3	1688	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTCCAAGTTTTT	-48933282	False	191	15	True	AATAAA	-31	NA	48933318	48930387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48930613_48931642
WTC11_00038933	chr17	-	534	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	443	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48996680	True	NA	-12	True	ATTAAA	-16	NA	48997049	48995265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_48995583_48996417_48996492_48996906
WTC11_00038935	chr17	-	11628	6	FSM	ENSG00000198740.9	ENST00000430262.3	11628	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.40908153700972	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTGTGTGTCTTTCTTC	-49360776	True	NA	-9	True	AGTAAA	-24	NA	49362250	49289205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49298925_49311311_49311457_49311926_49312043_49312697_49312846_49316825_49317984_49361908
WTC11_00038936	chr17	-	1847	7	FSM	ENSG00000167085.13	ENST00000511832.6	1847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1649.03301631256	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-49346675	False	NA	-3	True	AATAAA	-24	NA	49414802	49404051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414741
WTC11_00038938	chr17	-	1895	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	10	-20	0	0	multi-exon	FALSE	canonical	3	128	junction_6	1601.41926635927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-49346721	True	NA	-3	True	AATAAA	-24	NA	49414848	49404051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
WTC11_00038939	chr17	-	1867	7	FSM	ENSG00000167085.13	ENST00000419140.7	1867	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	1645.68500597438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346721	True	NA	-23	True	AATAAA	-4	NA	49414848	49404071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414747
WTC11_00038940	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_7	1814.59125661164	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346757	True	NA	-23	True	AATAAA	-4	NA	49414884	49404071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
WTC11_00038941	chr17	-	4017	6	FSM	ENSG00000167085.13	ENST00000508009.6	4017	6	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_5	345.986704946881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346771	True	NA	-23	True	AATAAA	-4	NA	49414898	49404071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
WTC11_00038947	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	82.8505280610812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675271	True	NA	0	True	AATAAA	-20	NA	49678110	49598883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
WTC11_00038949	chr17	-	919	8	FSM	ENSG00000121067.19	ENST00000507970.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	108.803698916715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATGAGTTAGGAGGAC	-49675216	True	NA	NA	False	NA	NA	NA	49678055	49611380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49675894_49676017_49677932
WTC11_00038951	chr17	-	1338	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	-18	0	0	multi-exon	FALSE	canonical	3	163	junction_7	96.6187740555633	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	-49708073	False	NA	-15	True	AATAAA	-20	NA	49708090	49701320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
WTC11_00038952	chr17	-	943	9	FSM	ENSG00000121073.15	ENST00000503334.5	943	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	191.794649299713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGGGTGGGCACTGT	-49707984	True	NA	NA	False	NA	NA	NA	49708163	49702891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707342_49707445_49708075
WTC11_00038954	chr17	-	2336	8	FSM	ENSG00000121104.8	ENST00000240364.7	2329	8	0	-7	0	7	multi-exon	FALSE	canonical	3	155	junction_7	20.4230761839721	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTAAATATTTGGGG	-49760892	True	NA	0	True	AATAAA	-27	NA	49764131	49710324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49763891
WTC11_00038955	chr17	-	1496	8	FSM	ENSG00000121104.8	ENST00000513602.5	1522	8	26	0	9	0	multi-exon	FALSE	canonical	0	0	junction_7	73.328725891129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCCAGAAGGTCTTG	-49788531	False	NA	NA	False	NA	NA	NA	49788566	49710994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49788496
WTC11_00038958	chr17	-	240	1	FSM	ENSG00000167100.15	ENST00000573376.1	2356	1	1522	594	1522	-592	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAACCCTCATCTTTCCC	-50113466	False	NA	NA	False	NA	NA	NA	50113502	50113262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50113300_50113500
WTC11_00038959	chr17	-	2157	5	ISM	ENSG00000108819.11	ENST00000612501.2	4212	10	11123	-2	5598	2	3prime_fragment	FALSE	canonical	3	15	junction_1	2.1650635094611	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCCTGGTTTCTTGA	NA	False	NA	-5	True	CATAAA	-16	NA	50139554	50133734	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_50135385_50135552_50135650_50135967_50136198_50139262_50139317_50139428
WTC11_00038961	chr17	-	1147	2	FSM	ENSG00000108821.14	ENST00000510710.3	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCGAGATCCGCGCCGA	-50187110	False	NA	NA	False	NA	NA	NA	50187122	50185843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50186508_50186639
WTC11_00038962	chr17	-	600	9	FSM	ENSG00000108821.14	ENST00000476387.1	600	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	15.6479830968723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTGATGGCTCTCCT	-50189708	False	NA	NA	False	NA	NA	NA	50194058	50190908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942
WTC11_00038965	chr17	-	648	4	NNC	ENSG00000108826.16	novel	636	3	NA	NA	0	32271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	696.995616118845	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGGTGTGGTGGTGCA	-50359916	False	185	NA	False	ACTAAA	-25	NA	50370573	50335585	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_50335613_50367864_50368299_50370031_50370100_50370454
WTC11_00038967	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_3	91.3613095839201	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50362527	True	NA	-13	True	AATAAA	-38	NA	50373184	50367866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
WTC11_00038968	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	1	-1	1	0	multi-exon	FALSE	canonical	3	1323	junction_2	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50362549	True	NA	-13	True	AATAAA	-38	NA	50373206	50367866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50370100_50370454_50370587_50373130
WTC11_00038970	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	56.4852488118211	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-50380134	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
WTC11_00038971	chr17	-	1484	4	FSM	ENSG00000136457.10	ENST00000508540.6	1705	4	0	221	0	-218	multi-exon	FALSE	canonical	2	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTTCCTCTGTTCCTC	-50468854	False	NA	NA	False	NA	NA	NA	50468880	50464716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50465050_50465293_50465440_50465706_50465871_50468039
WTC11_00038972	chr17	-	4174	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	-8	0	8	multi-exon	FALSE	canonical	3	157	junction_2	26.7523363465698	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTTCATTTTGGCTTC	-50707569	False	NA	-1	True	ATTAAA	-26	NA	50707914	50693189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
WTC11_00038986	chr17	-	5371	17	FSM	ENSG00000011258.16	ENST00000586178.6	5365	17	0	-6	0	6	multi-exon	FALSE	canonical	3	21	junction_13	10.8793094909558	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCAGTTCTTTAATAT	-51253355	True	NA	-7	True	AATAAA	-20	NA	51260049	51177418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_51180695_51192202_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259142_51259207_51259834
WTC11_00038988	chr17	-	3248	1	FSM	ENSG00000166260.13	ENST00000572088.1	3244	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	-54955139	False	NA	-7	True	AATAAA	-18	NA	54955149	54951901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54951900_54955100
WTC11_00038989	chr17	-	3948	5	FSM	ENSG00000166260.13	ENST00000576370.5	2663	5	0	-1285	0	1285	multi-exon	FALSE	canonical	3	6	junction_1	135.368709456802	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTGACCAATATGAAATC	-54958257	True	NA	NA	False	ATTAAA	-37	NA	54968653	54950616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54952113_54961118_54962916_54963305_54963432_54964696_54964853_54968280
WTC11_00038990	chr17	-	1061	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	-7	0	0	multi-exon	FALSE	canonical	3	6	junction_1	158.854493169063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	-54958258	True	NA	-7	True	AATAAA	-18	NA	54968654	54951901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
WTC11_00038991	chr17	-	3364	1	FSM	ENSG00000279059.1	ENST00000623493.1	1667	1	-1624	-73	-1624	73	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTTGAGCCCAGGAGT	-54949654	False	NA	64	True	NA	NA	NA	54960050	54956686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54956700_54960000
WTC11_00038992	chr17	-	3144	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	6	0	-6	multi-exon	FALSE	canonical	3	277	junction_1	27.7168220079832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGTGTGTATTCTAGT	-54958258	True	NA	NA	False	AGTAAA	-14	NA	54968654	54960427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
WTC11_00038993	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-54958307	True	NA	15	True	ATTAAA	-33	NA	54968703	54962902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54963432_54964696_54964853_54968280
WTC11_00038994	chr17	-	2658	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	-89	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.7039486250005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419629	True	NA	-19	True	AATAAA	-14	NA	55421924	55392621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
WTC11_00038995	chr17	-	2662	8	FSM	ENSG00000108960.9	ENST00000649377.1	2641	8	0	-21	0	0	multi-exon	FALSE	canonical	2	8	junction_4	150.849702197456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419540	True	NA	-19	True	AATAAA	-14	NA	55421835	55392621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55404454_55404548_55407745_55407821_55411256_55411418_55414150_55414233_55421669
WTC11_00038997	chr17	-	1167	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	-163	-434	-36	434	multi-exon	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAATGTCCTGATTTT	-55419665	True	NA	1	True	AATAAA	-23	NA	55421960	55419657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55420534_55421669
WTC11_00038999	chr17	-	5782	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	-33	-4	-2	4	multi-exon	TRUE	canonical	0	0	junction_5	10.5445483544816	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTGTGATTTTTAGT	-56909476	True	NA	-2	True	AATAAA	-21	NA	56914082	56887904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
WTC11_00039000	chr17	-	2644	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	-10	0	10	multi-exon	FALSE	canonical	3	307	junction_3	17.410884207555	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTATCATGTTGAGTATT	-56960093	True	NA	-5	True	AATAAA	-27	NA	56961050	56938188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
WTC11_00039003	chr17	-	946	6	NNC	ENSG00000181610.13	novel	5609	5	NA	NA	0	102154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.214531575005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTTAATTTTAAGTTA	-57838032	True	NA	NA	False	NA	NA	NA	57850056	57732626	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57732652_57839480_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
WTC11_00039004	chr17	-	881	6	NNC	ENSG00000181610.13	novel	5609	5	NA	NA	0	6269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.214531575005	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAAAGATCCTCCATA	-57837973	True	NA	NA	False	AAAAAG	-3	NA	57849997	57828511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57828537_57839486_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
WTC11_00039005	chr17	-	5610	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	-1	0	1	multi-exon	FALSE	canonical	3	780	junction_4	64.5155020130821	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCAGATTTCTTTTTT	-57838020	True	NA	-5	True	AATAAA	-23	NA	57850044	57834779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
WTC11_00039012	chr17	-	4655	7	NNC	ENSG00000136451.9	novel	4630	6	NA	NA	0	21982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.9286139835624	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCAGAGACACCCCTA	-57985189	True	NA	NA	False	NA	NA	NA	57988254	57949564	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57949591_57971552_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
WTC11_00039013	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	18.9272290629136	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-57985189	True	NA	-5	True	ATTAAA	-17	NA	57988254	57971551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
WTC11_00039014	chr17	-	2342	6	FSM	ENSG00000136451.9	ENST00000584396.5	2342	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	80.2456229335906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	-57985336	False	NA	NA	False	AATATA	-20	NA	57985348	57973758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57985253
WTC11_00039016	chr17	-	7117	2	FSM	ENSG00000264112.1	ENST00000577267.1	4056	2	-3024	-37	-1653	34	multi-exon	FALSE	canonical	3	224	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTGGGATAGAATTTC	-57996492	False	NA	31	True	NA	NA	NA	57996503	57989004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57989267_57989648
WTC11_00039017	chr17	-	7499	1	FSM	ENSG00000264112.1	ENST00000582096.1	2483	1	-4982	-34	-1653	34	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTGGGATAGAATTTC	-57996492	False	NA	31	True	NA	NA	NA	57996503	57989004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57989000_57996500
WTC11_00039020	chr17	-	5349	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	-6	0	6	multi-exon	FALSE	canonical	3	1335	junction_1	199.707007610872	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCATTTTGCACTTAGTG	-57975877	True	NA	-4	True	ATTAAA	-25	NA	58007246	58000912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
WTC11_00039027	chr17	-	212	1	FSM	ENSG00000278627.1	ENST00000611427.1	652	1	404	36	404	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTAAAAAGTTTTCAG	NA	False	NA	-20	True	AATAAA	-3	NA	58202599	58202387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58202400_58202600
WTC11_00039028	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.5229216102066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039031	chr17	-	2265	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	-5	0	5	multi-exon	TRUE	canonical	2	7	junction_2	38.6316236230112	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTGGCTGTTTGTCT	-58217779	True	NA	0	True	CATAAA	-21	NA	58219255	58205435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039033	chr17	-	2408	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	-5	0	5	multi-exon	FALSE	canonical	3	9	junction_14	37.5303337522742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTGGCTGTTTGTCT	-58217779	True	NA	0	True	CATAAA	-21	NA	58219255	58205435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039034	chr17	-	3596	17	FSM	ENSG00000011143.19	ENST00000677160.1	3592	17	0	-4	0	4	multi-exon	FALSE	canonical	3	109	junction_3	20.1880804870102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTTGGCTGTTTGTC	-58217779	True	NA	-1	True	CATAAA	-20	NA	58219255	58205436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039035	chr17	-	3023	17	FSM	ENSG00000011143.19	ENST00000677709.1	3018	17	0	-5	0	5	multi-exon	FALSE	canonical	3	109	junction_3	20.6666246639358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTGGCTGTTTGTCT	-58217779	True	NA	0	True	CATAAA	-21	NA	58219255	58205435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039038	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	42.0602701671139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-58217779	True	NA	-7	True	AATAAA	-21	NA	58219255	58207560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039039	chr17	-	1663	14	ISM	ENSG00000011143.19	ENST00000675753.2	2403	18	19	2129	0	-4	5prime_fragment	FALSE	canonical	3	9	junction_10	41.8007389306449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTGCCAGGCATT	-58217760	True	NA	-16	True	AATAAA	-12	NA	58219236	58207569	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
WTC11_00039041	chr17	-	887	6	FSM	ENSG00000005379.17	ENST00000582679.1	887	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	3.37045990927054	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTAAGACCCCATTCTC	NA	False	NA	NA	False	AAGAAA	-2	NA	58310740	58306341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58306387_58306799_58306969_58307610_58307763_58307841_58307942_58309966_58310159_58310511
WTC11_00039042	chr17	-	381	2	FSM	ENSG00000005379.17	ENST00000585149.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATGGGCTTTGGCAGC	NA	False	NA	NA	False	NA	NA	NA	58311988	58311438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58311723_58311891
WTC11_00039044	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	210.874962951983	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	-58352411	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
WTC11_00039047	chr17	-	5993	18	FSM	ENSG00000108389.10	ENST00000682306.1	5987	18	0	-6	0	-2	multi-exon	FALSE	canonical	3	57	junction_17	12.8908110831174	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGGTCGTTTTATTTT	-58512908	True	NA	-2	True	AATAAA	-21	NA	58514638	58489530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58514362
WTC11_00039048	chr17	-	5838	19	FSM	ENSG00000108389.10	ENST00000323456.9	5839	19	0	1	0	-1	multi-exon	FALSE	canonical	3	16	junction_18	23.3595091272626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCGTT	-58517056	True	NA	-9	True	AATAAA	-14	NA	58517905	58489537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
WTC11_00039049	chr17	-	631	4	FSM	ENSG00000108389.10	ENST00000580983.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTATTCATTCCCCCCC	-58511489	False	NA	NA	False	AAAACA	-43	NA	58511511	58507984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58508275_58508467_58508565_58508680_58508842_58511428
WTC11_00039052	chr17	-	1530	12	FSM	ENSG00000108387.16	ENST00000317256.10	1530	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	17.1907143876287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCTGCTCAGGCCCCT	-58531527	True	NA	-113	True	TTTAAA	-42	NA	58532046	58520358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531960
WTC11_00039054	chr17	-	330	1	FSM	ENSG00000108387.16	ENST00000582976.1	1707	1	1307	70	-866	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGGCTGATGCTCCC	-58530207	False	NA	NA	False	NA	NA	NA	58530217	58529887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58529900_58530200
WTC11_00039055	chr17	-	918	6	ISM	ENSG00000121101.16	ENST00000240361.12	4911	33	126083	-1	-1682	-1	3prime_fragment	FALSE	canonical	2	10	junction_2	3.3466401061363	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCTGTGTAAGATATA	-58565922	False	NA	-15	True	AATAAA	-21	NA	58565940	58556678	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_58557048_58557798_58557851_58559452_58559563_58561519_58561613_58564868_58564969_58565746
WTC11_00039056	chr17	-	4559	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	-638	-299	-638	286	multi-exon	TRUE	canonical	3	57	junction_1	60.8286385174688	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTGAATGAATGAATCT	-59107524	False	NA	NA	False	NA	NA	NA	59107559	58982351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00039058	chr17	-	4491	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	-2	0	0	multi-exon	FALSE	canonical	3	252	junction_15	32.6202298441483	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTGCTGTTTATTAAA	-59099954	True	NA	-1	True	AATAAA	-18	NA	59106880	58998199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00039059	chr17	-	3548	23	FSM	ENSG00000108395.14	ENST00000393065.6	3548	23	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_22	65.7575844854065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTGTTTAAATAATC	-59099900	True	NA	NA	False	NA	NA	NA	59106826	58998986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
WTC11_00039062	chr17	-	2802	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	0	7	0	-7	multi-exon	FALSE	canonical	3	420	junction_2	64.5617705939221	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGACTATAGTGTCTTT	-59143571	True	NA	-6	True	NA	NA	NA	59155186	59109863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
WTC11_00039063	chr17	-	608	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	-13	0	0	multi-exon	FALSE	canonical	3	255	junction_1	156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-59143633	True	NA	-46	True	NA	NA	NA	59155248	59111942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59131280_59131368_59155130
WTC11_00039064	chr17	-	717	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	-184	0	-184	0	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-59155375	False	NA	-46	True	NA	NA	NA	59155444	59111942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59155130
WTC11_00039066	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	223.861564365123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	-59143559	True	NA	NA	False	AATATA	-6	NA	59155174	59112090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
WTC11_00039069	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59700737	True	NA	-7	True	AATAAA	-17	NA	59707430	59697307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59697979_59707370
WTC11_00039070	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59707559	True	NA	-7	True	AATAAA	-17	NA	59707626	59697307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59697979_59698870_59700190_59707370
WTC11_00039071	chr17	-	2473	10	NNC	ENSG00000108423.15	novel	2491	9	NA	NA	0	15405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2767794031626	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGGTGGTGGAGGTGGA	-59891123	True	NA	NA	False	AGTAAA	-38	NA	59892893	59844073	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_59844101_59859473_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
WTC11_00039076	chr17	-	2196	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	3	-77	0	77	multi-exon	TRUE	canonical	3	32	junction_6	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTTTGGGAGGCAGA	-59964038	True	NA	NA	False	AAAACA	-39	NA	59964737	59952162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
WTC11_00039081	chr17	-	543	5	NNC	ENSG00000266992.1	novel	1412	11	NA	NA	9452	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	22.349496638627	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATTGCCATAATGTTT	NA	False	NA	NA	False	NA	NA	NA	59992932	59976025	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_59976133_59976655_59976771_59987446_59987605_59989263_59989345_59992850
WTC11_00039084	chr17	-	6129	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	-21	0	21	multi-exon	FALSE	canonical	3	83	junction_2	11.8982295756979	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAATGCCAGATTCTAA	-60077858	True	NA	NA	False	NA	NA	NA	60078921	60040986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
WTC11_00039087	chr17	-	402	3	FSM	ENSG00000261040.8	ENST00000587298.2	577	3	165	10	11	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	-60088287	True	NA	NA	False	AATAAA	-13	NA	60088302	60083571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60083767_60085102_60085204_60088196
WTC11_00039089	chr17	-	7086	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	-149	0	149	multi-exon	FALSE	canonical	3	132	junction_17	30.7835239105697	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTGATCCTGTTTT	-60388476	True	NA	0	True	AGTAAA	-27	NA	60392133	60177177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
WTC11_00039090	chr17	-	6981	33	NIC	ENSG00000170832.13	novel	6937	34	NA	NA	-39	137	combination_of_known_splicesites	FALSE	canonical	3	13	junction_28	42.198146804688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCAGCCTCCCTCTCTG	-60392162	False	NA	-12	True	AGTAAA	-15	NA	60392172	60177189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
WTC11_00039093	chr17	-	806	1	FSM	ENSG00000241157.1	ENST00000475274.1	360	1	-359	-87	-359	87	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAATAATAAAAGACAGT	-60245990	False	NA	NA	False	AATAAA	-25	NA	60246006	60245200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60245200_60246000
WTC11_00039097	chr17	-	1110	2	ISM	ENSG00000062725.10	ENST00000588668.5	525	5	29500	14372	29500	940	internal_fragment	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAACCTCCTCTCTAAA	NA	False	NA	NA	False	NA	NA	NA	60496438	60493533	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_60494618_60496412
WTC11_00039099	chr17	-	8018	20	FSM	ENSG00000136492.10	ENST00000259008.7	8182	20	12	152	-3	-152	multi-exon	FALSE	canonical	0	0	junction_19	16.0913252382281	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGGCACTGTTTCTA	-61861353	True	NA	NA	False	TATAAA	-42	NA	61863516	61679290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
WTC11_00039105	chr17	-	6131	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	0	-3	0	3	multi-exon	TRUE	canonical	3	43	junction_24	17.3060181407766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTTTGTGTTTCATTC	-61925602	True	NA	4	True	TATAAA	-28	NA	61927982	61865363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
WTC11_00039109	chr17	-	4598	1	FSM	ENSG00000279133.1	ENST00000624147.1	3819	1	-819	40	-819	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGGGAAAAAAAAGATTG	-62008327	False	NA	NA	False	NA	NA	NA	62008337	62003739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62003700_62008300
WTC11_00039110	chr17	-	1042	3	FSM	ENSG00000108510.10	ENST00000583958.1	1068	3	0	26	0	-26	multi-exon	FALSE	canonical	3	15	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATAAATTCATTGAG	-62029963	False	NA	-32	True	NA	NA	NA	62030000	62010452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62011234_62029540_62029652_62029850
WTC11_00039113	chr17	-	371	3	ISM	ENSG00000263887.7	ENST00000582394.1	1500	11	8275	3939	8275	-3939	internal_fragment	FALSE	canonical	3	31	junction_1	26	6527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCAGAGGTTTGTCAG	NA	False	NA	NA	False	NA	NA	NA	62288751	62286640	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_62286804_62288286_62288393_62288649
WTC11_00039114	chr17	-	348	1	FSM	ENSG00000239246.3	ENST00000460492.1	447	1	-21	120	-21	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGAGGAGTGCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	62516788	62516440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62516400_62516800
WTC11_00039115	chr17	-	1254	1	FSM	ENSG00000274565.1	ENST00000611274.1	1154	1	-83	-17	-83	17	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCACCTTGGTATGTTT	-62627638	False	NA	NA	False	AATAAA	-31	NA	62627673	62626419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62626400_62627700
WTC11_00039116	chr17	-	2934	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	-5	0	5	multi-exon	FALSE	canonical	3	80	junction_5	31.5556651015313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTTATCTTCCTTTAC	-63444271	True	NA	-1	True	AATAAA	-19	NA	63446306	63432298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
WTC11_00039117	chr17	-	3147	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	4	0	4	0	multi-exon	FALSE	canonical	3	35	junction_5	49.3169342112828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	-63444145	False	NA	-9	True	AATAAA	-11	NA	63446180	63432306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
WTC11_00039121	chr17	-	3528	1	FSM	ENSG00000270587.1	ENST00000603263.1	413	1	-1166	-1949	-1166	1949	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCACTTGATTTCCT	-63612256	False	NA	NA	False	NA	NA	NA	63612350	63608822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63608800_63612400
WTC11_00039122	chr17	-	3274	14	NNC	ENSG00000108588.15	novel	3283	13	NA	NA	0	82604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.384447961938	154	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCTTCTGGATGGTGA	-63755540	True	NA	NA	False	NA	NA	NA	63773564	63662650	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_63662675_63745254_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
WTC11_00039125	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	49	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	-63691799	True	NA	-18	True	AATAGA	-5	NA	63700108	63697815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63699070_63699256
WTC11_00039126	chr17	-	2549	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	-1311	-482	0	9	multi-exon	FALSE	canonical	3	68	junction_4	477.537433087711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGCCTGCTGGGGGA	-63701162	False	NA	-9	True	AATAGA	-14	NA	63701172	63697806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
WTC11_00039128	chr17	-	846	6	FSM	ENSG00000136490.9	ENST00000580222.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	550.132856681002	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCGGAGACTGTGTGG	-63691804	True	NA	NA	False	NA	NA	NA	63700113	63698188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698373_63698496_63698712_63698798_63698939_63699027_63699114_63699256_63699396_63700031
WTC11_00039130	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	495.420213051506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	-63691793	True	NA	NA	False	NA	NA	NA	63700102	63698334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
WTC11_00039135	chr17	-	2965	10	FSM	ENSG00000266173.7	ENST00000245865.10	2959	10	0	-6	0	3	multi-exon	TRUE	canonical	0	0	junction_2	67.9396972994125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63741735	False	NA	-20	True	ATTAAA	-28	NA	63741761	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63704909_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
WTC11_00039136	chr17	-	2097	11	FSM	ENSG00000266173.7	ENST00000640979.1	2086	11	0	-11	0	3	multi-exon	FALSE	canonical	1	2	junction_1	57.1860122757305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63739631	True	NA	-20	True	ATTAAA	-28	NA	63741799	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
WTC11_00039137	chr17	-	2149	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	-9	0	3	multi-exon	FALSE	canonical	3	14	junction_10	48.1857631318115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63739664	True	NA	-20	True	ATTAAA	-28	NA	63741832	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
WTC11_00039138	chr17	-	2143	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	10	0	3	multi-exon	FALSE	canonical	3	41	junction_9	39.3330649708359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63739692	True	NA	-20	True	ATTAAA	-28	NA	63741860	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
WTC11_00039139	chr17	-	2120	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	10	0	3	multi-exon	FALSE	canonical	3	47	junction_9	37.8181173513437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63739693	True	NA	-20	True	ATTAAA	-28	NA	63741861	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
WTC11_00039140	chr17	-	2215	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	-6	0	3	multi-exon	FALSE	canonical	3	60	junction_10	38.8174366545468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTGCGTCAGCTC	-63739706	True	NA	-20	True	ATTAAA	-28	NA	63741874	63702828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
WTC11_00039158	chr17	-	908	5	FSM	ENSG00000108592.17	ENST00000583202.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_3	35.8538700839951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTAAGTGATGGGGCCT	-63822010	False	NA	NA	False	AAGAAA	-3	NA	63822023	63820258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63820439_63820838_63821116_63821353_63821644_63821722_63821844_63821983
WTC11_00039159	chr17	-	867	4	FSM	ENSG00000108592.17	ENST00000583901.1	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_3	34.08160142299	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTTGCTCTAGGTGCT	-63822176	False	NA	NA	False	NA	NA	NA	63822189	63820914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63820939_63821029_63821116_63821353_63821644_63821722
WTC11_00039160	chr17	-	380	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTCAGGAGATGATTGA	-63822891	False	NA	NA	False	NA	NA	NA	63822904	63822524	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_63822500_63822900
WTC11_00039161	chr17	-	575	3	FSM	ENSG00000108592.17	ENST00000580376.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTTGCTCTGTTGCCC	-63824374	False	NA	NA	False	NA	NA	NA	63824386	63823589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63823953_63824083_63824240_63824330
WTC11_00039168	chr17	-	2464	13	FSM	ENSG00000108604.17	ENST00000448276.7	2464	13	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	46.7297193086655	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	-63838330	True	NA	-11	True	AATAAA	-16	NA	63842685	63832080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
WTC11_00039172	chr17	-	905	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	0	-2	0	2	multi-exon	FALSE	canonical	3	4	junction_4	1.87082869338697	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGACTAGGTGTCCTT	-63881918	True	NA	-1	True	AATAAA	-17	NA	63881944	63880212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
WTC11_00039175	chr17	-	3813	3	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	29070	1	5856	-1	3prime_fragment	FALSE	canonical	2	9	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGCTTCTCCCTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	63943848	63938554	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_63941994_63942825_63943097_63943745
WTC11_00039176	chr17	-	419	3	FSM	ENSG00000007314.12	ENST00000584310.1	577	3	158	0	158	0	multi-exon	FALSE	canonical	3	6	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTACGGCTTTAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	63949546	63947953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63948064_63948610_63948766_63949392
WTC11_00039177	chr17	-	519	4	FSM	ENSG00000178607.17	ENST00000583896.1	571	4	52	0	52	0	multi-exon	FALSE	canonical	2	6	junction_1	1.69967317119759	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACTGTCTGCGTCTACC	NA	False	NA	NA	False	ACTAAA	-33	NA	64066932	64060575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64060588_64063985_64064152_64065208_64065288_64066670
WTC11_00039187	chr17	-	4147	12	FSM	ENSG00000108654.16	ENST00000678757.1	4144	12	0	-3	0	0	multi-exon	FALSE	canonical	3	48	junction_2	1063.41927854608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64505371	False	NA	-6	True	AATAAA	-18	NA	64505410	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500883_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676
WTC11_00039188	chr17	-	4911	12	FSM	ENSG00000108654.16	ENST00000580026.6	4908	12	0	-3	0	0	multi-exon	FALSE	canonical	2	87	junction_11	1052.40668693749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64505911	False	NA	-6	True	AATAAA	-18	NA	64505950	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
WTC11_00039190	chr17	-	5211	11	FSM	ENSG00000108654.16	ENST00000678110.1	5208	11	0	-3	0	0	multi-exon	FALSE	canonical	3	3156	junction_8	208.102763076322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64485588	True	NA	-6	True	AATAAA	-18	NA	64506349	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039193	chr17	-	5345	11	FSM	ENSG00000108654.16	ENST00000678810.1	5342	11	0	-3	0	0	multi-exon	FALSE	canonical	3	3156	junction_8	206.773039828697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64506460	False	NA	-6	True	AATAAA	-18	NA	64506499	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039194	chr17	-	5721	10	FSM	ENSG00000108654.16	ENST00000585317.2	5718	10	0	-3	0	0	multi-exon	FALSE	canonical	3	3156	junction_7	211.480904195878	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64506460	False	NA	-6	True	AATAAA	-18	NA	64506499	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039195	chr17	-	4003	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	-5	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1311.4695131888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64506482	False	408	-6	True	AATAAA	-18	NA	64506521	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039196	chr17	-	3830	14	FSM	ENSG00000108654.16	ENST00000450599.7	3826	14	0	-4	0	0	multi-exon	FALSE	canonical	2	32	junction_13	987.244950210421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64506647	False	NA	-6	True	AATAAA	-18	NA	64506686	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506513
WTC11_00039198	chr17	-	4465	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	-4	0	0	multi-exon	FALSE	canonical	3	58	junction_13	980.47334299886	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64507523	True	NA	-6	True	AATAAA	-18	NA	64507562	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
WTC11_00039199	chr17	-	5782	7	FSM	ENSG00000108654.16	ENST00000579461.2	5782	7	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_4	260.28280559593	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTAATAAATGTGATTT	-64485545	True	NA	-35	True	NA	NA	NA	64506306	64498282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64502550_64502925_64503099_64503187_64503349_64503429_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039201	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_9	198.690922401171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-64485528	True	NA	-4	True	AATAAA	-23	NA	64506289	64499615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00039202	chr17	-	5340	3	FSM	ENSG00000108654.16	ENST00000582326.2	5340	3	0	0	0	0	multi-exon	FALSE	canonical	3	3713	junction_2	32.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTGAAGACTGAATTAA	-64485528	True	NA	-24	True	AATAAA	-31	NA	64506289	64499635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64503349_64503429_64504843_64506075
WTC11_00039209	chr17	-	5905	19	FSM	ENSG00000108854.16	ENST00000582081.5	5892	19	0	-13	0	0	multi-exon	TRUE	canonical	2	2	junction_16	49.5986359828375	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTTTGTAATGAATC	-64659705	False	NA	-1	True	AATAAA	-45	NA	64661897	64542281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64593990_64594105_64598381_64598491_64661828
WTC11_00039213	chr17	-	848	6	FSM	ENSG00000266820.1	ENST00000584190.1	848	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	76.9701240742147	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCATGTAGCTGAGGCAT	NA	False	NA	NA	False	GGGGCT	-20	NA	64758603	64749917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64750009_64751806_64751957_64754004_64754165_64754420_64754655_64758241_64758380_64758528
WTC11_00039215	chr17	-	3443	5	FSM	ENSG00000214174.9	ENST00000430983.6	3430	5	5	-18	-1	18	multi-exon	FALSE	canonical	3	69	junction_4	67.0634028364204	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATCTTTGTAGTTTTAG	-64973942	True	NA	NA	False	AATATA	-36	NA	64975568	64966531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554
WTC11_00039218	chr17	-	1144	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-88	12	-76	0	multi-exon	FALSE	canonical	3	39	junction_5	74.8668150785113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64975666	False	NA	70	True	AATAAA	-15	NA	64975693	64968037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
WTC11_00039220	chr17	-	4345	2	NNC	ENSG00000120063.10	novel	6249	4	NA	NA	12	-1426	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTACCATTTCATTTA	-65052980	False	NA	-15	True	AATAAA	-15	NA	65056728	65010714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_65014642_65056310
WTC11_00039221	chr17	-	4424	11	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	22.9660619175339	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCCTCGTCTTT	-65561150	False	NA	-5	True	ATTAAA	-15	NA	65561191	65528566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65560824
WTC11_00039223	chr17	-	4060	10	FSM	ENSG00000168646.14	ENST00000618960.4	4060	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	31.6403399335581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCCTCGTCTTT	-65561606	True	NA	-5	True	ATTAAA	-15	NA	65561647	65528566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
WTC11_00039225	chr17	-	13851	34	NNC	ENSG00000198265.12	novel	6279	33	NA	NA	146	19	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_33	27.5843143567275	1297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAACTATAATTCTCT	-67245291	True	NA	NA	False	AATAAA	-35	NA	67245843	67070424	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160366_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147_67245180_67245814
WTC11_00039226	chr17	-	6279	33	FSM	ENSG00000198265.12	ENST00000580168.5	6279	33	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	24.342285739018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTAATTGTGCAACTA	-67240328	True	NA	NA	False	TTTAAA	-42	NA	67245183	67077971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160366_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
WTC11_00039227	chr17	-	425	2	FSM	ENSG00000198265.12	ENST00000582864.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAGAAAAAAATCCCA	-67189598	False	NA	-24	True	AATATA	-24	NA	67189614	67188217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67188617_67189588
WTC11_00039229	chr17	-	1743	12	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	0	46577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	391.432820408001	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAAAAATAGAGTCCTG	-67344826	False	NA	NA	False	NA	NA	NA	67366519	67291338	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67291371_67340502_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
WTC11_00039232	chr17	-	3601	13	NNC	ENSG00000197170.10	novel	1752	13	NA	NA	0	8776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	504.55185698686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTCAAGATCCCCCTG	-67344875	True	NA	NA	False	NA	NA	NA	67366568	67329139	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67329170_67337918_67338622_67339394_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
WTC11_00039234	chr17	-	3592	13	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	0	8776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	504.55185698686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTCAAGATCCCCCTG	-67344884	True	NA	NA	False	NA	NA	NA	67366577	67329139	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67329170_67337918_67338605_67339395_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
WTC11_00039235	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	64.8617761088917	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-67344884	True	NA	-1	True	AATAAA	-20	NA	67366577	67337915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
WTC11_00039238	chr17	-	97	1	FSM	ENSG00000263690.2	ENST00000582790.2	97	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGTTTAAAAGGAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	67471585	67471488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67471500_67471600
WTC11_00039240	chr17	-	1657	2	FSM	ENSG00000186665.10	ENST00000536693.1	1654	2	0	-3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-67991531	True	NA	-6	True	AATAAA	-19	NA	67993552	67991098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67992900
WTC11_00039241	chr17	-	2088	4	FSM	ENSG00000186665.10	ENST00000580729.3	2105	4	17	0	17	0	multi-exon	FALSE	canonical	3	68	junction_3	54.8776416726845	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	NA	False	NA	-6	True	AATAAA	-19	NA	67996452	67991098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67993043_67993236_67993423_67993985_67996122
WTC11_00039242	chr17	-	1557	2	ISM	ENSG00000186665.10	ENST00000449250.3	1082	3	-50	-237	-43	0	intron_retention	FALSE	canonical	3	200	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-67991574	True	NA	-6	True	AATAAA	-19	NA	67993595	67991098	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_67992104_67993043
WTC11_00039243	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	-67993639	False	NA	-37	True	NA	NA	NA	67993649	67991129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67992900_67993236_67993423
WTC11_00039245	chr17	-	2140	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	17	-249	0	-84	multi-exon	FALSE	canonical	1	64	junction_5	30.5053501682719	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAATCCGGATTCTCACAA	-68456202	True	NA	NA	False	NA	NA	NA	68457479	68421031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
WTC11_00039246	chr17	-	1575	12	FSM	ENSG00000070540.13	ENST00000546360.5	1575	12	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_11	49.3968580658412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTGGTATATAACCGG	-68456202	True	NA	NA	False	TTTAAA	-34	NA	68457479	68421513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
WTC11_00039252	chr17	-	939	2	ISM	ENSG00000108950.12	ENST00000590074.5	1642	12	23	52105	23	-48811	5prime_fragment	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAGTTTCTGTATAAT	-68600237	False	NA	NA	False	AATAAA	-24	NA	68600573	68589721	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_68590350_68600262
WTC11_00039257	chr17	-	804	6	FSM	ENSG00000154265.16	ENST00000587607.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	5.70613704707484	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGATAATGGGACT	-69327067	False	NA	NA	False	AATAAA	-5	NA	69327090	69306762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69327051
WTC11_00039258	chr17	-	2770	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	-18	0	17	multi-exon	FALSE	canonical	0	0	junction_5	22.000561160071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTCTCAAAGCTGCTT	-73090957	True	NA	0	True	AATAAA	-34	NA	73092688	72645931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
WTC11_00039260	chr17	-	254	1	FSM	ENSG00000252274.1	ENST00000516465.1	137	1	71	-188	71	188	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGACACAGGGACCTAAG	NA	False	NA	NA	False	NA	NA	NA	72818901	72818647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72818600_72818900
WTC11_00039263	chr17	-	290	1	FSM	ENSG00000266501.1	ENST00000578331.1	419	1	122	7	122	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGGATGAACCACAAAGA	NA	False	NA	NA	False	NA	NA	NA	73068166	73067876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73067900_73068200
WTC11_00039267	chr17	-	895	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	68	-451	-6	373	multi-exon	FALSE	canonical	3	62	junction_1	0	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCCATGAAAAAACATAAG	-73232049	True	NA	-14	True	AATAAA	-19	NA	73232326	73209114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73209769_73232085
WTC11_00039268	chr17	-	3416	2	FSM	ENSG00000179604.10	ENST00000580315.1	1022	2	101	-2495	101	0	multi-exon	FALSE	canonical	3	26	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-73310533	False	NA	-2	True	ATTAAA	-18	NA	73311307	73283623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73286613_73310880
WTC11_00039270	chr17	-	1789	3	FSM	ENSG00000204347.4	ENST00000375366.4	1727	3	-62	0	-62	0	multi-exon	FALSE	canonical	3	23	junction_1	4.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGATTGAACCACTCAG	-74361692	True	NA	-3	True	AATAAA	-21	NA	74361930	74356415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74357732_74359968_74360246_74361734
WTC11_00039271	chr17	-	1907	7	FSM	ENSG00000109065.12	ENST00000357814.8	1907	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	66.5749368923638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	-74773195	True	NA	0	True	TATAAA	-38	NA	74776345	74770528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
WTC11_00039272	chr17	-	1880	7	FSM	ENSG00000109065.12	ENST00000580301.5	1860	7	0	-20	0	-18	multi-exon	FALSE	canonical	3	203	junction_2	30.0152738895827	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTTGCTTGCCGTGGCTC	-74773189	True	NA	-18	True	TATAAA	-20	NA	74776339	74770546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
WTC11_00039273	chr17	-	1982	7	NNC	ENSG00000109065.12	novel	1860	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	94.9679770589364	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACATTATAAAACGAA	-74773148	True	NA	-38	True	AAAACA	-14	NA	74776298	74770566	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776103
WTC11_00039274	chr17	-	2020	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	-13	-14	0	0	multi-exon	FALSE	canonical	3	246	junction_4	16.9587735405601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACATTATAAAACGAA	-74773186	True	NA	-38	True	AAAACA	-14	NA	74776336	74770566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
WTC11_00039291	chr17	-	1848	12	FSM	ENSG00000161513.12	ENST00000293195.10	1846	12	0	-2	0	2	multi-exon	FALSE	canonical	3	209	junction_4	27.8973916847062	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGATGGGGGACTTT	-74871209	True	NA	-1	True	AATAAA	-19	NA	74872994	74862494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
WTC11_00039292	chr17	-	2487	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	-5	0	3	multi-exon	FALSE	canonical	3	16	junction_11	93.4707272866973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGATGGGGGACTTTT	-74871221	True	NA	0	True	AATAAA	-20	NA	74873006	74862493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
WTC11_00039296	chr17	-	3307	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	-9	0	9	multi-exon	FALSE	canonical	2	72	junction_16	13.752665286014	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGAGGCGAGGGGCC	-74971239	True	NA	6	True	AATAAA	-25	NA	74972759	74950732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
WTC11_00039299	chr17	-	1704	12	NIC	ENSG00000167861.16	novel	3298	19	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	2	16	junction_9	27.9521432818592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTTTTATCTATCAT	-74971203	True	NA	NA	False	ATTAAA	-24	NA	74972723	74957971	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963079_74963739_74963911_74964482_74964633_74972590
WTC11_00039304	chr17	-	578	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	-25	0	25	multi-exon	FALSE	canonical	3	23	junction_2	1482.69338957857	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGATAATTAAGCCTCT	-75011775	True	NA	14	True	ATTAAA	-41	NA	75046985	75038837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
WTC11_00039305	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	15.9652400197707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	-75131435	False	NA	-3	True	AATAAA	-20	NA	75131446	75130224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
WTC11_00039307	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	259.265629551367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	-75131462	False	NA	-49	True	AATACA	-4	NA	75131473	75130270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
WTC11_00039317	chr17	-	3884	18	NNC	ENSG00000125447.18	novel	4034	18	NA	NA	0	33809	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.1101461565677	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGGAACTAGTGGCACA	-75252930	True	NA	NA	False	NA	NA	NA	75261585	75202789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75202824_75236598_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
WTC11_00039319	chr17	-	4034	18	FSM	ENSG00000125447.18	ENST00000621870.4	4034	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	100.560711748699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252945	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75248839_75249009_75261547
WTC11_00039321	chr17	-	4181	15	FSM	ENSG00000125447.18	ENST00000621217.4	4181	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	84.4822164597922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252966	True	NA	-5	True	AATAAA	-16	NA	75261621	75236598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
WTC11_00039323	chr17	-	5164	14	FSM	ENSG00000125447.18	ENST00000613421.4	5156	14	2	-10	0	7	multi-exon	FALSE	canonical	3	286	junction_11	27.6893160777234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTAGTATAGACGCCA	-75252966	True	NA	2	True	AATAAA	-23	NA	75261621	75236591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75241058_75241399_75241517_75241614_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
WTC11_00039332	chr17	-	1828	2	FSM	ENSG00000125457.15	ENST00000678201.1	1824	2	0	-4	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	-75267461	False	NA	NA	False	NA	NA	NA	75268661	75266263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537
WTC11_00039333	chr17	-	2072	6	FSM	ENSG00000125457.15	ENST00000579194.6	2058	6	0	-14	0	0	multi-exon	FALSE	canonical	3	36	junction_5	67.727099450663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	-75269799	False	NA	NA	False	NA	NA	NA	75270999	75266263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113
WTC11_00039338	chr17	-	2344	6	FSM	ENSG00000125454.12	ENST00000402418.7	2331	6	0	-13	0	1	multi-exon	FALSE	canonical	3	154	junction_1	10.3614670775909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCTCCCCTGGCACAT	-75285214	False	NA	-4	True	ATTAAA	-25	NA	75287674	75272979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632
WTC11_00039340	chr17	-	1642	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	-12	0	1	multi-exon	FALSE	canonical	3	27	junction_7	64.3948280341754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCTCCCCTGGCACAT	-75286973	True	NA	-4	True	ATTAAA	-25	NA	75289433	75272979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
WTC11_00039342	chr17	-	1599	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	5	-50	0	1	multi-exon	FALSE	canonical	3	68	junction_7	43.4638014998266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCTCCCCTGGCACAT	-75286946	True	NA	-4	True	ATTAAA	-25	NA	75289406	75272979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
WTC11_00039351	chr17	-	3180	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	2	0	-2	multi-exon	FALSE	canonical	3	808	junction_2	45.985731482711	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTATCTTTTTTTCC	-75391775	True	NA	-8	True	AATAAA	-17	NA	75393864	75318077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
WTC11_00039353	chr17	-	3181	5	FSM	ENSG00000177885.15	ENST00000316615.9	3181	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	349.933118609828	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75389017	True	NA	-6	True	AATAAA	-19	NA	75405709	75318075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75321658_75321828_75332699_75332798_75393550_75393766_75405488
WTC11_00039358	chr17	-	1176	4	FSM	ENSG00000108469.15	ENST00000578865.5	1176	4	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_2	1.24721912892465	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGAGTTTTATTTCCT	NA	False	NA	-9	True	AATAAA	-45	NA	75628874	75626844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671
WTC11_00039359	chr17	-	4187	19	ISM	ENSG00000108469.15	ENST00000317905.10	3669	20	-46	0	-11	0	intron_retention	FALSE	canonical	3	76	junction_5	14.5737799396174	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664713	False	NA	-18	True	AATAAA	-36	NA	75667200	75626853	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
WTC11_00039372	chr17	-	1751	10	NNC	ENSG00000092929.12	novel	4080	32	NA	NA	0	24980	intron_retention	FALSE	non_canonical	0	0	junction_1	26.4425769648726	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACATCTGTGCTGAAAAA	-75833198	False	NA	NA	False	NA	NA	NA	75833269	75802244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75802278_75827229_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
WTC11_00039373	chr17	-	1768	11	Fusion	ENSG00000092929.12_ENSG00000204316.13	novel	1358	9	NA	NA	0	540	multi-exon	FALSE	non_canonical	0	0	junction_1	476.431904893029	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGAGGTGCCAGGCTG	-75893543	True	NA	NA	False	TTTAAA	-38	NA	75904901	75829121	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_75829492_75841138_75841161_75898642_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
WTC11_00039376	chr17	-	1765	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	130	0	12	0	multi-exon	FALSE	canonical	2	9	junction_7	153.254623394652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	-75846531	False	NA	-16	True	AGTAAA	-6	NA	75855192	75845708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
WTC11_00039377	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	176.457501965771	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-75846674	True	NA	NA	False	NA	NA	NA	75855335	75846494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
WTC11_00039381	chr17	-	1924	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	-17	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	7.49933330370107	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878191	False	NA	NA	False	AATAAA	-16	NA	75878213	75874163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
WTC11_00039384	chr17	-	2049	5	FSM	ENSG00000141569.12	ENST00000648382.1	2049	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	105.860757601672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTGAGTAGCTGGGAT	-75895673	False	NA	NA	False	NA	NA	NA	75896050	75889852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75891348_75892010_75892186_75892266_75892501_75892754_75892851_75896001
WTC11_00039385	chr17	-	865	5	FSM	ENSG00000141569.12	ENST00000543309.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	88.933964265628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAAGCCCAGCGCCTCC	-75896181	False	NA	NA	False	GGGGCT	-37	NA	75896558	75891022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75891348_75892010_75892186_75892266_75892501_75892754_75892851_75896523
WTC11_00039388	chr17	-	1359	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	-1	0	1	multi-exon	FALSE	canonical	3	1065	junction_1	59.9979166304964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGGCTCACACCTGTAA	-75893526	True	NA	-2	True	AATAAA	-19	NA	75904884	75898642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
WTC11_00039399	chr17	-	4429	16	NNC	ENSG00000161533.12	novel	2417	15	NA	NA	0	34001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.9836823897295	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCAGTGGTACACACCT	-75976062	True	NA	NA	False	NA	NA	NA	75979128	75907505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75907536_75941506_75942169_75945048_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
WTC11_00039400	chr17	-	5879	25	FSM	ENSG00000188878.20	ENST00000319129.10	4156	25	0	-1723	0	1453	multi-exon	TRUE	canonical	2	15	junction_16	9.33398435229505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTACCTGAGGT	-75929747	False	NA	NA	False	NA	NA	NA	75931289	75908120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75910807_75912191_75912308_75913701_75913820_75913912_75914051_75914121_75914299_75914746_75914933_75915016_75915140_75917731_75917851_75917930_75918071_75918161_75918270_75919667_75919875_75920006_75920108_75920273_75920430_75921243_75921303_75921471_75921561_75921944_75922047_75923185_75923639_75925346_75925447_75926029_75926164_75926287_75926427_75926757_75926878_75927454_75927533_75928075_75928194_75929996_75930048_75931228
WTC11_00039402	chr17	-	876	6	FSM	ENSG00000188878.20	ENST00000588283.1	877	6	0	1	0	-1	multi-exon	FALSE	canonical	2	29	junction_3	5.65685424949238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTCTCCTGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	75917761	75912191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75912308_75913701_75913820_75913912_75914299_75914829_75914933_75915016_75915140_75917731
WTC11_00039414	chr17	-	2832	17	NNC	ENSG00000167881.15	novel	2831	16	NA	NA	0	32632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.466084650409	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTAGCCCCTGTCTC	-76060763	True	NA	NA	False	NA	NA	NA	76072491	76006142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_76006170_76038784_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
WTC11_00039421	chr17	-	4793	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	-11	0	11	multi-exon	FALSE	canonical	3	50	junction_12	184.396981845095	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGTCACAGGCTCGTC	-76091367	True	NA	-24	True	AATAAA	-31	NA	76103787	76081004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
WTC11_00039427	chr17	-	719	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	-1	0	1	multi-exon	FALSE	canonical	3	693	junction_1	20.7257220756131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTGTTGT	-76091314	True	NA	NA	False	ATTAAA	-38	NA	76103734	76101010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
WTC11_00039428	chr17	-	2587	3	FSM	ENSG00000129654.8	ENST00000322957.7	2587	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9.5	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCTGCTCAAAACTT	-76141034	True	NA	-4	True	AATAAA	-18	NA	76141245	76136332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76138121_76139897_76140565_76141113
WTC11_00039430	chr17	-	5085	19	FSM	ENSG00000141576.16	ENST00000269391.11	5054	19	-31	0	-31	0	multi-exon	FALSE	canonical	3	32	junction_7	7.66344537800906	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGCTAACTGCAAAGTG	-76239722	True	NA	-20	True	AATAAA	-17	NA	76240524	76142473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76145354_76152354_76152466_76154282_76154329_76155251_76155318_76155561_76155735_76156209_76156322_76158392_76158502_76159334_76159574_76161534_76161648_76161842_76162003_76162551_76162624_76164747_76164796_76165501_76165546_76166460_76166528_76167008_76167127_76167650_76167798_76173701_76173791_76212363_76212483_76240152
WTC11_00039441	chr17	-	5431	18	NIC	ENSG00000175931.13	novel	5377	18	NA	NA	-51	0	combination_of_known_junctions	TRUE	canonical	1	18	junction_6	56.7605911340109	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCCGTTGCCTTTG	-76450706	True	NA	-5	True	ATTAAA	-18	NA	76453203	76389455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397892_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
WTC11_00039447	chr17	-	3597	19	FSM	ENSG00000129667.13	ENST00000313080.8	3582	19	0	-15	0	10	multi-exon	TRUE	canonical	2	10	junction_16	21.506817753367	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGACCTCAGGTAGCATG	-76499401	True	NA	2	True	ATTAAA	-33	NA	76501407	76470880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479942_76481374_76481546_76487711_76487910_76501352
WTC11_00039457	chr17	-	5643	4	FSM	ENSG00000182534.14	ENST00000355797.7	5661	4	0	18	0	-18	multi-exon	FALSE	canonical	3	60	junction_1	203.454062519173	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGTATGCTGTTTTCATA	-76706987	True	NA	NA	False	AATAAA	-6	NA	76710955	76672568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76677703_76685071_76685166_76688112_76688177_76710604
WTC11_00039458	chr17	-	1922	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	10	-99	0	99	multi-exon	FALSE	canonical	3	420	junction_1	38.3869190682914	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTACAAAGCCATACATC	-76706987	True	NA	98	True	NA	NA	NA	76710955	76679466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
WTC11_00039459	chr17	-	2068	5	FSM	ENSG00000182534.14	ENST00000375036.6	1950	5	-16	-102	-16	99	multi-exon	FALSE	canonical	3	67	junction_2	202.488734254526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTACAAAGCCATACATC	-76707052	True	NA	98	True	NA	NA	NA	76711020	76679466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76680880_76683846_76683928_76685071_76685166_76688112_76688177_76710604
WTC11_00039460	chr17	-	2959	3	FSM	ENSG00000182534.14	ENST00000592148.1	3510	3	556	-5	556	0	multi-exon	FALSE	canonical	3	420	junction_1	47	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	NA	False	NA	-1	True	AATAAA	-24	NA	76689663	76679565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76680880_76685071_76685166_76688112
WTC11_00039462	chr17	-	1628	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	-7	0	2	multi-exon	FALSE	canonical	3	147	junction_3	11.0526015037185	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTCCTTTGAGAATA	-76724383	True	NA	-22	True	AATAAA	-26	NA	76726606	76718443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
WTC11_00039463	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_1	96.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-76654137	True	NA	-4	True	ATTAAA	-31	NA	76737331	76734114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76735159_76736153_76736465_76736798
WTC11_00039465	chr17	-	1359	4	FSM	ENSG00000161547.17	ENST00000585202.5	1359	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	831.762385941241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAATATGTCTCGGTC	-76736983	False	NA	-12	True	ATTAAA	-23	NA	76737308	76734122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76734563_76735060_76735159_76736153_76736465_76736798
WTC11_00039470	chr17	-	703	2	FSM	ENSG00000141524.17	ENST00000590494.1	702	2	0	-1	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTGTCCCTTGGGGCTC	-78113940	False	NA	-16	True	ATTAAA	-15	NA	78113959	78112920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78113212_78113547
WTC11_00039472	chr17	-	3070	19	FSM	ENSG00000141524.17	ENST00000593044.5	3070	19	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_18	60.5775953775684	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACACCAGGACAAGGAAG	-78124610	True	NA	NA	False	NA	NA	NA	78128772	78113075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78126367_78126523_78126649_78126776_78126907_78128658
WTC11_00039474	chr17	-	580	3	FSM	ENSG00000141524.17	ENST00000589933.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGCGCAAGGTCATC	-78118156	False	NA	NA	False	NA	NA	NA	78118172	78117315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78117348_78117467_78117645_78117801
WTC11_00039483	chr17	-	1670	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	11	0	11	0	multi-exon	FALSE	canonical	3	1002	junction_1	57.877802307966	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	NA	False	NA	NA	False	GGGGCT	-45	NA	78187222	78174120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
WTC11_00039486	chr17	-	2737	2	FSM	ENSG00000184557.4	ENST00000330871.3	2734	2	0	-3	0	3	multi-exon	FALSE	canonical	3	223	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGCCTTTTCTGCAC	-78357147	True	NA	NA	False	AATAAA	-27	NA	78360077	78356774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78359184_78359749
WTC11_00039491	chr17	-	602	4	FSM	ENSG00000055483.20	ENST00000588130.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	75.5351279574977	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	-78799705	True	NA	2	True	AATACA	-24	NA	78799722	78787380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666
WTC11_00039492	chr17	-	3884	21	NIC	ENSG00000055483.20	novel	5885	21	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	36.4919169132015	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGCCTGTGGGTGCTTC	-78833826	True	NA	-3	True	AATACA	-19	NA	78840781	78787385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
WTC11_00039493	chr17	-	2482	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	-2	6	2	3prime_fragment	FALSE	canonical	3	53	junction_1	69.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTTGTTGGTTTC	-78798974	False	NA	-10	True	AATAAA	-20	NA	78798984	78795649	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_78797903_78798399_78798552_78798907
WTC11_00039494	chr17	-	5957	21	FSM	ENSG00000055483.20	ENST00000449938.7	5872	21	-85	0	-12	0	multi-exon	FALSE	canonical	3	69	junction_1	31.1457862318484	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTCTTTGTTGGTT	-78833944	True	NA	-12	True	AATAAA	-18	NA	78840899	78795651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78797880_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
WTC11_00039495	chr17	-	5967	21	FSM	ENSG00000055483.20	ENST00000592231.6	5895	21	-72	0	1	0	multi-exon	FALSE	canonical	3	53	junction_1	33.7446292022894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTCTTTGTTGGTT	-78833931	True	NA	-12	True	AATAAA	-18	NA	78840886	78795651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78797903_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
WTC11_00039496	chr17	-	6479	20	FSM	ENSG00000055483.20	ENST00000312010.10	5234	20	-12	-1233	-12	2	multi-exon	FALSE	canonical	3	136	junction_11	22.1632072641278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTTGTTGGTTTC	-78833944	True	NA	-10	True	AATAAA	-20	NA	78840899	78795649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
WTC11_00039501	chr17	-	3669	5	FSM	ENSG00000035862.12	ENST00000262768.11	3652	5	0	-17	0	17	multi-exon	FALSE	canonical	3	85	junction_1	10.0498756211209	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTATCCGATGTTCAG	-78923432	True	NA	10	True	AATAAA	-36	NA	78925387	78852959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78855865_78857521_78857647_78870897_78871007_78873818_78873920_78924958
WTC11_00039509	chr17	-	3526	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	12	-4	-3	3	multi-exon	FALSE	canonical	3	148	junction_3	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCCCGGTCTGTGC	-79007247	True	NA	-7	True	AATAAA	-21	NA	79009805	78991712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
WTC11_00039510	chr17	-	3593	5	NIC	ENSG00000171302.17	novel	3287	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_4	76.0213785720833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTCTCCCGGTCTGT	-79007206	True	NA	-9	True	AATAAA	-19	NA	79009764	78991714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78993921_78995017_78995222_78996991_78997964_79005371_79005482_79009663
WTC11_00039511	chr17	-	1492	5	NIC	ENSG00000171302.17	novel	3287	5	NA	NA	15	0	intron_retention	FALSE	canonical	1	2	junction_1	60.8661441196992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-79007191	True	NA	-10	True	AATAAA	-18	NA	79009749	78991715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78992141_78995017_78995222_78996991_78997645_78997839_78997964_79009663
WTC11_00039517	chr17	-	2674	11	NIC	ENSG00000167281.20	novel	1519	15	NA	NA	0	48	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	29.3579631446053	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCCCAGGGTGCAGGAC	-79182469	True	NA	47	True	NA	NA	NA	79183472	79089296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79104072_79104127_79106650_79106789_79115493_79115749_79183263
WTC11_00039518	chr17	-	2480	11	FSM	ENSG00000167281.20	ENST00000648001.1	2461	11	0	-19	0	-3	multi-exon	FALSE	canonical	3	16	junction_4	36.0223541707091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACTCTGTATGCTCTG	NA	False	NA	-4	True	AATAAA	-20	NA	79115580	79089347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096834_79097291_79097425_79097691_79097746_79101583_79101645_79103161_79103255_79104072_79104127_79106650_79106789_79115493
WTC11_00039519	chr17	-	2676	12	NIC	ENSG00000167281.20	novel	1519	15	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	32.4488153841509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTTCTTCAAACCAG	-79182448	True	NA	-23	True	AATAAA	-1	NA	79183451	79089366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79103161_79103255_79104072_79104127_79106650_79106789_79115493_79115749_79183263
WTC11_00039526	chr17	-	10957	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	39.2874551508672	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028958	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
WTC11_00039528	chr17	-	10915	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	50.1585914626862	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028958	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
WTC11_00039532	chr17	-	1325	4	FSM	ENSG00000141543.12	ENST00000576573.1	697	4	80	-708	80	-187	multi-exon	FALSE	canonical	3	1405	junction_3	71.0977417988004	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCCTGGCCTCATTT	-80137498	False	NA	NA	False	NA	NA	NA	80137523	80134555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385
WTC11_00039533	chr17	-	1536	13	NNC	ENSG00000141543.12	novel	1579	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	398.745141036226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTTCATTA	-80132367	True	NA	40	True	AATACA	-3	NA	80147128	80135298	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792_80147043_80147100
WTC11_00039536	chr17	-	4494	1	FSM	ENSG00000262580.5	ENST00000570309.1	4399	1	-100	5	-100	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGTAACGTGCTTGAA	NA	False	NA	-8	True	AATAAA	-8	NA	80205171	80200677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80200700_80205200
WTC11_00039538	chr17	-	5554	5	FSM	ENSG00000181523.13	ENST00000575282.5	5562	5	0	8	0	0	multi-exon	TRUE	canonical	3	69	junction_2	7.08872343937891	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTGAACTCATTTATG	-80219441	True	NA	-26	True	AGTAAA	-15	NA	80220322	80209289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
WTC11_00039544	chr17	-	490	1	FSM	ENSG00000260369.2	ENST00000562672.2	995	1	103	402	103	-402	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGTGTGGTTCCCCT	-80454482	False	NA	NA	False	NA	NA	NA	80454626	80454136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80454100_80454600
WTC11_00039545	chr17	-	5440	5	FSM	ENSG00000171246.6	ENST00000306773.5	5439	5	0	-1	0	1	multi-exon	FALSE	canonical	3	50	junction_4	6.81909084849293	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTCCTCAGGATGTCT	-80475585	True	NA	1	True	AGTAAA	-16	NA	80476607	80466832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80471035_80471731_80471912_80473199_80473445_80475510_80475719_80476002
WTC11_00039547	chr17	-	3505	25	FSM	ENSG00000141577.14	ENST00000374782.7	3505	25	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_7	33.253210997837	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGACTGCCTTGTCT	-81220152	True	NA	-11	True	AGTAAA	-22	NA	81222945	81189592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
WTC11_00039550	chr17	-	3630	26	FSM	ENSG00000141577.14	ENST00000450824.7	3630	26	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	26.9468810811196	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	-81220172	True	NA	-14	True	AGTAAA	-19	NA	81222965	81189595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
WTC11_00039551	chr17	-	3673	26	FSM	ENSG00000141577.14	ENST00000269392.8	3673	26	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	29.0149202997354	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	-81220206	True	NA	-14	True	AGTAAA	-19	NA	81222999	81189595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198105_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
WTC11_00039555	chr17	-	3644	11	FSM	ENSG00000167302.11	ENST00000576090.5	3642	11	0	-2	0	0	multi-exon	TRUE	canonical	3	64	junction_3	13.0598621738516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81236502	False	NA	-5	True	AATAAA	-19	NA	81238403	81228276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979
WTC11_00039557	chr17	-	3967	12	ISM	ENSG00000167302.11	ENST00000637944.2	2455	13	14	0	0	0	intron_retention	FALSE	canonical	3	63	junction_11	13.9402503030755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237140	True	NA	-5	True	AATAAA	-19	NA	81239041	81228276	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386
WTC11_00039559	chr17	-	2262	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	25	0	-9	0	multi-exon	FALSE	canonical	3	24	junction_5	23.61187542651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237165	True	NA	-5	True	AATAAA	-19	NA	81239066	81228276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
WTC11_00039566	chr17	-	1627	1	FSM	ENSG00000157637.13	ENST00000573058.1	1627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAACTTCTCGCCCCTT	-81252493	False	NA	-17	True	AATAAA	-18	NA	81252503	81250876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81250900_81252500
WTC11_00039567	chr17	-	3067	14	FSM	ENSG00000157637.13	ENST00000288439.9	2708	14	-40	-319	0	0	multi-exon	TRUE	canonical	3	158	junction_1	15.4199594010164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAACTTCTCGCCCCTT	-81291459	True	NA	-17	True	AATAAA	-18	NA	81295307	81250876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
WTC11_00039570	chr17	-	6828	1	FSM	ENSG00000287431.1	ENST00000665286.1	6784	1	-29	-15	-29	15	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCAATTTGTTTTAA	-81345910	True	NA	-2	True	AATAAA	-31	NA	81345995	81339167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81339200_81346000
WTC11_00039571	chr17	-	1571	2	FSM	ENSG00000262877.5	ENST00000571724.3	1565	2	0	-6	0	6	multi-exon	FALSE	canonical	3	5	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTGGCCTGAACA	-81390246	False	NA	NA	False	ATTAAA	-26	NA	81390256	81388119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81389324_81389889
WTC11_00039572	chr17	-	1794	1	FSM	ENSG00000279692.1	ENST00000624417.1	1536	1	-142	-116	-142	116	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGCGGCTCTCAA	-81397276	False	NA	76	True	NA	NA	NA	81397286	81395492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81395500_81397300
WTC11_00039573	chr17	-	1979	7	NNC	ENSG00000184009.13	novel	1859	7	NA	NA	0	62889	intron_retention	FALSE	non_canonical	0	0	junction_1	5205.25132278292	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGCCTGAGGCCAGG	-81262518	True	NA	NA	False	AAAAAG	-3	NA	81512818	81446523	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81446565_81509970_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
WTC11_00039577	chr17	-	2053	6	FSM	ENSG00000184009.13	ENST00000570382.2	2052	6	0	-1	0	1	multi-exon	FALSE	canonical	3	88	junction_5	5661.98733308368	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGAATGGCTCCTGTTT	-81262518	True	NA	28	True	AATAAA	-14	NA	81512818	81509974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
WTC11_00039579	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5511.97106668749	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
WTC11_00039580	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6189.05972933961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
WTC11_00039583	chr17	-	2256	5	FSM	ENSG00000184009.13	ENST00000575842.5	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	13369	junction_4	509.754352605252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGCCGTAACCAATG	-81262481	True	NA	14	True	NA	NA	NA	81512781	81509988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
WTC11_00039588	chr17	-	3567	5	FSM	ENSG00000185504.17	ENST00000425898.2	2996	5	-570	-1	-570	0	multi-exon	FALSE	canonical	1	104	junction_3	72.6683390480338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	-81548386	False	NA	-1	True	NA	NA	NA	81549068	81539884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908
WTC11_00039589	chr17	-	3822	9	FSM	ENSG00000185504.17	ENST00000443656.6	3822	9	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_7	79.984373473823	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	-81550499	True	NA	-1	True	NA	NA	NA	81552376	81539884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551731_81552053_81552165
WTC11_00039590	chr17	-	3603	9	FSM	ENSG00000185504.17	ENST00000327787.13	3597	9	0	-6	0	0	multi-exon	FALSE	canonical	1	72	junction_7	75.1156400159115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	-81550476	True	NA	-1	True	NA	NA	NA	81552353	81539884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551927_81552053_81552165
WTC11_00039591	chr17	-	4411	11	NNC	ENSG00000185504.17	novel	3597	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.0260716143598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGCCTCGGCTGTTT	-81552451	True	NA	-7	True	NA	NA	NA	81553133	81539890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546400_81546541_81546908_81547679_81549205_81549363_81550247_81551204_81551927_81552053_81552165_81552968_81553073
WTC11_00039593	chr17	-	4381	17	FSM	ENSG00000182446.14	ENST00000331134.11	4381	17	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_3	40.6877880174138	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTCCTGGTGTGTC	-81632361	True	NA	-8	True	AATAAA	-15	NA	81637112	81556886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81559417_81565504_81565608_81567416_81567534_81569015_81569112_81572016_81572089_81588943_81589105_81596115_81596243_81597244_81597317_81600340_81600428_81604547_81604728_81606690_81606815_81608727_81608823_81610209_81610259_81613317_81613495_81622165_81622279_81629724_81629806_81636915
WTC11_00039594	chr17	-	654	5	FSM	ENSG00000182446.14	ENST00000573519.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	275.280765764701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGAGAGCGGGCGCCAC	NA	False	NA	NA	False	NA	NA	NA	81569064	81559090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81559417_81563920_81563980_81565504_81565608_81567416_81567534_81569015
WTC11_00039599	chr17	-	1057	6	NNC	ENSG00000214087.9	novel	786	4	NA	NA	0	49750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.156468157438	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATGTACA	-81674492	True	NA	NA	False	NA	NA	NA	81683734	81631436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81631462_81681178_81681880_81682033_81682150_81683012_81683127_81683535_81683594_81683691
WTC11_00039601	chr17	-	937	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	-479	0	-25	multi-exon	FALSE	canonical	3	27	junction_1	1.24721912892465	3272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAATTAGTGTGTCC	-81653306	True	NA	-27	True	AATACA	-25	NA	81653694	81650483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
WTC11_00039605	chr17	-	980	2	FSM	ENSG00000204237.5	ENST00000571757.1	923	2	28	-85	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGTTTCACAGGA	-81662532	True	NA	-21	True	AATAAA	-4	NA	81666605	81665055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81665585_81666154
WTC11_00039606	chr17	-	836	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	-15	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCACACCCCCTCACAGA	-81662464	True	NA	-106	True	NA	NA	NA	81666537	81665140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81665585_81666145
WTC11_00039608	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	264.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674539	True	NA	-45	True	AATAAA	-15	NA	81683781	81681186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81681880_81682033_81683595_81683692
WTC11_00039609	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.941379338799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674555	True	NA	-45	True	AATAAA	-15	NA	81683797	81681186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
WTC11_00039612	chr17	-	1545	5	FSM	ENSG00000214087.9	ENST00000571082.5	1526	5	0	-19	0	0	multi-exon	FALSE	canonical	0	0	junction_4	242.759654802852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	-81674501	True	NA	-59	True	AATAAA	-1	NA	81683743	81681200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81681880_81682033_81682676_81683012_81683127_81683535_81683595_81683692
WTC11_00039620	chr17	-	2036	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	18	-77	18	77	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGTGAGCAGACGTACG	-81702844	True	NA	NA	False	NA	NA	NA	81703282	81701246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81701200_81703300
WTC11_00039621	chr17	-	942	6	FSM	ENSG00000225663.8	ENST00000457257.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	379.141873182058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-81817096	False	NA	44	True	NA	NA	NA	81826394	81822360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379
WTC11_00039622	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	141.046756432043	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-81823993	True	NA	44	True	NA	NA	NA	81833291	81822360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
WTC11_00039623	chr17	-	2979	5	FSM	ENSG00000225663.8	ENST00000576730.5	2979	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	218.112786190998	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81817364	False	NA	-12	True	AATAAA	-16	NA	81826662	81822416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498
WTC11_00039625	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	210.814041278089	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823993	True	NA	-12	True	AATAAA	-16	NA	81833291	81822416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
WTC11_00039626	chr17	-	1120	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	3	0	3	0	multi-exon	FALSE	canonical	3	44	junction_1	372.786206230268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	-81824001	True	NA	-24	True	AATAAA	-4	NA	81833299	81822428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
WTC11_00039627	chr17	-	3418	4	FSM	ENSG00000225663.8	ENST00000574190.5	2775	4	-643	0	-175	0	multi-exon	FALSE	canonical	3	945	junction_3	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCGAGGGTCTGTGAATA	-81817539	False	NA	-49	True	NA	NA	NA	81826837	81822453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498
WTC11_00039632	chr17	-	3568	2	FSM	ENSG00000185624.16	ENST00000474712.2	3562	2	0	-6	0	0	multi-exon	FALSE	canonical	3	2303	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81847011	False	69	-6	True	AATAAA	-16	NA	81847047	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81846630_81846946
WTC11_00039634	chr17	-	3883	5	FSM	ENSG00000185624.16	ENST00000681954.1	3878	5	0	-5	0	0	multi-exon	FALSE	canonical	3	2166	junction_4	89.2370438775288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81856457	False	NA	-6	True	AATAAA	-16	NA	81856497	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845992_81846428_81847073_81847242_81847348_81855141
WTC11_00039635	chr17	-	3450	8	FSM	ENSG00000185624.16	ENST00000681571.1	3438	8	0	-12	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	140.702029923132	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81856655	False	NA	-6	True	AATAAA	-16	NA	81856695	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81847073_81847242_81847348_81855141_81855280_81855452
WTC11_00039636	chr17	-	2892	9	FSM	ENSG00000185624.16	ENST00000680719.1	2879	9	0	-13	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	142.524559287163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81859708	False	NA	-6	True	AATAAA	-16	NA	81859718	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180
WTC11_00039640	chr17	-	2380	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	-3	0	0	multi-exon	FALSE	canonical	1	51	junction_6	697.501541216935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827752	True	NA	-6	True	AATAAA	-16	NA	81860535	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039641	chr17	-	2380	11	FSM	ENSG00000185624.16	ENST00000680593.1	2371	11	0	-9	0	2	multi-exon	FALSE	canonical	3	46	junction_2	698.641259875195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	-81827752	True	NA	0	True	AATAAA	-22	NA	81860535	81843156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845626_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039643	chr17	-	8211	7	FSM	ENSG00000185624.16	ENST00000466567.3	8201	7	0	-10	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	143.607586460078	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827766	True	NA	-6	True	AATAAA	-16	NA	81860549	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141
WTC11_00039644	chr17	-	2780	10	FSM	ENSG00000185624.16	ENST00000679470.1	2780	10	0	0	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	139.421910529882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827775	True	NA	-6	True	AATAAA	-16	NA	81860558	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039645	chr17	-	2602	10	FSM	ENSG00000185624.16	ENST00000680076.1	2596	10	0	-6	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	104.415244145079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827786	True	NA	-6	True	AATAAA	-16	NA	81860569	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039646	chr17	-	2833	10	FSM	ENSG00000185624.16	ENST00000679396.1	2822	10	0	-11	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	135.200080356467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827815	True	NA	-6	True	AATAAA	-16	NA	81860598	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039647	chr17	-	2631	11	FSM	ENSG00000185624.16	ENST00000680884.1	2631	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	700.275867069543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827841	True	NA	-6	True	AATAAA	-16	NA	81860624	81843162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855689_81859180_81859388_81860326
WTC11_00039648	chr17	-	3868	9	FSM	ENSG00000185624.16	ENST00000477607.7	2527	9	-1327	-14	0	0	multi-exon	FALSE	canonical	3	2166	junction_7	131.61775858523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	-81857417	False	NA	-33	True	NA	NA	NA	81857457	81843189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452
WTC11_00039649	chr17	-	2743	8	FSM	ENSG00000185624.16	ENST00000681614.1	2721	8	0	-22	0	0	multi-exon	FALSE	canonical	3	2166	junction_7	138.627381928709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	-81856119	False	NA	-33	True	NA	NA	NA	81856159	81843189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141
WTC11_00039653	chr17	-	3907	8	FSM	ENSG00000185624.16	ENST00000680799.1	3905	8	0	-2	0	0	multi-exon	FALSE	canonical	3	2166	junction_4	109.217252132002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	-81827737	True	NA	-33	True	NA	NA	NA	81860520	81843189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039654	chr17	-	3451	10	FSM	ENSG00000185624.16	ENST00000681020.1	3432	10	0	-19	0	0	multi-exon	FALSE	canonical	3	2166	junction_6	137.512109455544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	-81827739	True	NA	-33	True	NA	NA	NA	81860522	81843189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00039677	chr17	-	1162	7	NNC	ENSG00000183684.8	novel	1097	6	NA	NA	-27	10581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	659.870294493968	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTCACCAACCTGGGC	-81856224	True	NA	NA	False	NA	NA	NA	81891613	81877253	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81877292_81887834_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
WTC11_00039678	chr17	-	3191	1	FSM	ENSG00000263731.1	ENST00000582866.1	2682	1	-514	5	-514	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAATTTGTCTTTTCTG	-81846231	False	NA	-7	True	AATAAA	-15	NA	81881620	81878429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81878400_81881600
WTC11_00039687	chr17	-	1727	13	NNC	ENSG00000185813.11	novel	5089	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	82.6731768269895	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCGCCACTCTCCTTAT	-81907502	True	NA	-18	True	AAAACA	-21	NA	81911408	81904325	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907596_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
WTC11_00039697	chr17	-	2914	6	FSM	ENSG00000187531.14	ENST00000572976.5	2916	6	0	2	0	-2	multi-exon	FALSE	canonical	3	12	junction_3	40.4870349618245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGGTGTCCCCGAGTG	-81917142	False	NA	-3	True	ATTAAA	-14	NA	81917153	81911940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81912615_81913773_81913881_81914086_81914505_81914603_81914703_81915439_81915513_81915610
WTC11_00039699	chr17	-	2511	8	FSM	ENSG00000187531.14	ENST00000571832.5	2511	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.4052726193346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918135	False	2286	-1	True	ATTAAA	-16	NA	81918152	81911938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
WTC11_00039700	chr17	-	1725	10	FSM	ENSG00000187531.14	ENST00000328666.11	1725	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.0966918352397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918159	False	2286	-1	True	ATTAAA	-16	NA	81918176	81911938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
WTC11_00039711	chr17	-	5061	3	FSM	ENSG00000197063.11	ENST00000357736.9	5061	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCAGGTGCTTCTTTGGG	-81915813	False	11922	-2	True	AATAAA	-14	NA	81927735	81918269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81923058_81923149_81923215_81927527
WTC11_00039713	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	524.684356036453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925335	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
WTC11_00039715	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	557.088388159565	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
WTC11_00039716	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	606.730765844474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
WTC11_00039717	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_1	149.68234884433	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925378	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
WTC11_00039726	chr17	-	8576	44	NNC	ENSG00000169710.9	novel	8464	43	NA	NA	0	76397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	364.068134109072	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATGAGCCCGTCTGGA	-82047280	True	NA	NA	False	AAAAAG	-45	NA	82098294	82001940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_82001995_82078337_82079281_82079356_82079609_82080139_82080239_82080369_82080591_82080691_82080923_82081163_82081353_82081600_82081844_82082008_82082161_82082322_82082415_82082526_82082679_82082913_82083116_82083201_82083426_82083516_82083640_82083771_82083892_82083974_82084154_82084233_82084385_82084512_82084717_82084798_82084954_82085034_82085157_82085237_82085403_82085481_82085872_82086253_82086559_82087049_82087254_82087324_82087505_82087684_82087862_82087953_82088035_82088115_82088308_82088389_82088563_82088760_82088877_82088968_82089173_82089249_82089385_82089631_82089727_82090374_82090565_82090881_82091070_82091221_82091685_82092454_82092590_82092696_82092813_82092896_82093020_82093218_82093420_82093597_82093772_82095319_82095473_82096318_82096453_82098120
WTC11_00039727	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	530.744936386585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000800	True	NA	-32	True	AATAAA	-19	NA	82022858	82018702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
WTC11_00039728	chr17	-	765	5	FSM	ENSG00000169689.15	ENST00000392359.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	403.271233166959	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000820	True	NA	-32	True	AATAAA	-19	NA	82022878	82018702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022825
WTC11_00039729	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	617.10993077949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000834	True	NA	-32	True	AATAAA	-19	NA	82022892	82018702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
WTC11_00039730	chr17	-	750	4	FSM	ENSG00000169689.15	ENST00000306704.10	751	4	1	0	1	0	multi-exon	FALSE	canonical	3	1202	junction_2	268.254853948007	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000859	True	NA	-32	True	AATAAA	-19	NA	82022917	82018702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022825
WTC11_00039732	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	603.596512581045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	-82000763	False	NA	-45	True	AATAAA	-6	NA	82022821	82018715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
WTC11_00039733	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	681.188116455359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	-82000821	True	NA	-130	True	NA	NA	NA	82022879	82018800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
WTC11_00039734	chr17	-	861	4	FSM	ENSG00000169689.15	ENST00000577379.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	420.721074136086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	-82000791	True	NA	NA	False	NA	NA	NA	82022849	82018837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019382_82019640_82019695_82019857_82019910_82022638
WTC11_00039741	chr17	-	1249	7	FSM	ENSG00000169738.8	ENST00000579334.5	1251	7	0	2	0	0	multi-exon	FALSE	canonical	3	853	junction_6	71.4510321828873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	-82037601	False	NA	-5	True	AATAAA	-18	NA	82037681	82035880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037548_82037630
WTC11_00039742	chr17	-	832	8	FSM	ENSG00000169738.8	ENST00000306869.7	852	8	0	20	0	1	multi-exon	FALSE	canonical	3	836	junction_6	86.1012692788473	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCTATTCCTAGGCTG	-82029194	True	NA	-2	True	AATAAA	-21	NA	82037697	82035877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
WTC11_00039746	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	82.0399902486586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	-82037601	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
WTC11_00039752	chr17	-	2086	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	-4	0	0	multi-exon	FALSE	canonical	3	183	junction_4	37.989472225868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	-82049049	False	79	-1	True	AGTAAA	-19	NA	82051562	82047901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
WTC11_00039754	chr17	-	3107	4	FSM	ENSG00000169733.12	ENST00000582478.5	3107	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	36.5270067514739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	-82049318	True	NA	-1	True	AGTAAA	-19	NA	82051831	82047901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82049117_82049676_82050556_82050661_82051343_82051499
WTC11_00039773	chr17	-	961	4	FSM	ENSG00000169710.9	ENST00000578424.2	951	4	0	-10	0	0	multi-exon	FALSE	canonical	3	1507	junction_3	86.7448365418177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGGCATGTCCCACCC	-82080678	False	NA	NA	False	NA	NA	NA	82080695	82078996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82079281_82079356_82079609_82080139_82080239_82080369
WTC11_00039777	chr17	-	2829	8	FSM	ENSG00000176155.20	ENST00000419322.6	2829	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.94532915619566	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	82171732	82111985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82113766_82127691_82127909_82128492_82128598_82134072_82134195_82151559_82151774_82157747_82157949_82163199_82163358_82171700
WTC11_00039778	chr17	-	3742	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	-1695	0	0	multi-exon	TRUE	canonical	3	171	junction_2	85.7335810145607	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	-82271026	True	NA	-13	True	AATAAA	-22	NA	82273697	82242666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
WTC11_00039779	chr17	-	3716	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	-4	-31	4	multi-exon	FALSE	canonical	3	177	junction_1	70.8818338857002	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCTTTCCATGTGGTC	NA	False	NA	-9	True	AATAAA	-26	NA	82273731	82242662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
WTC11_00039792	chr17	-	1058	3	FSM	ENSG00000173762.8	ENST00000583376.1	1659	3	602	-1	600	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-82316921	False	NA	-7	True	AATAAA	-16	NA	82316950	82314872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82315432_82316194_82316410_82316666
WTC11_00039793	chr17	-	4249	9	FSM	ENSG00000181396.13	ENST00000313056.10	4249	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	13.2382022948737	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTCGGGAAGGGA	-82417247	True	NA	-14	True	AATAAA	-17	NA	82418586	82389209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82392535_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
WTC11_00039794	chr17	-	1652	10	FSM	ENSG00000181396.13	ENST00000329197.9	1652	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5806337495115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGGGGCCAGCAGCT	-82417237	True	NA	NA	False	CATAAA	-7	NA	82418576	82392009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82392535_82394330_82394544_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
WTC11_00039797	chr17	-	3155	4	FSM	ENSG00000178927.18	ENST00000578895.5	3154	4	0	-1	0	0	multi-exon	FALSE	canonical	3	209	junction_3	19.09624744987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGCTTCCACTCTTTA	-82444822	False	NA	-6	True	CATAAA	-18	NA	82448053	82442642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622
WTC11_00039798	chr17	-	2242	8	FSM	ENSG00000178927.18	ENST00000437807.6	2242	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	92.4770241735751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82447478	True	NA	-7	True	CATAAA	-17	NA	82450709	82442643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450479
WTC11_00039799	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	89.2143486217324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82447545	True	NA	-7	True	CATAAA	-17	NA	82450776	82442643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
WTC11_00039817	chr17	-	343	3	FSM	ENSG00000141542.11	ENST00000576148.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	14	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAGAGCCCCCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	82661031	82657914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82658135_82659579_82659658_82660986
WTC11_00039818	chr17	-	1532	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1493	-1	149	multi-exon	TRUE	canonical	3	120	junction_5	16.1012421881046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCCTGGTCTTGTGGT	-83050426	True	NA	NA	False	NA	NA	NA	83051810	82943641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
WTC11_00039819	chr17	-	3329	2	FSM	ENSG00000175711.9	ENST00000571301.1	3324	2	0	-5	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	NA	False	NA	-6	True	AATAAA	-21	NA	82949948	82943790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82944050_82946878
WTC11_00039821	chr17	+	1318	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGACCCCGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	61423	62741	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_61400_62700
WTC11_00039822	chr17	+	298	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	1696561	1696859	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_1696600_1696900
WTC11_00039823	chr17	+	604	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAATACCTGAGTCCTC	3727289	False	NA	0	True	GATAAA	-8	NA	3727304	3727908	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_3727300_3727900
WTC11_00039824	chr17	+	1571	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAAAGTCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	4233783	4235354	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_4233800_4235400
WTC11_00039826	chr17	+	276	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8033339	8033615	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_8033300_8033600
WTC11_00039827	chr17	+	273	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTCAAGTACCCCAACC	11972137	False	NA	NA	False	NA	NA	NA	11972389	11972662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_11972400_11972700
WTC11_00039828	chr17	+	731	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTTTCCTCTAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	18651956	18652687	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_18652000_18652700
WTC11_00039829	chr17	+	1643	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTAGTGTCTTTAGC	NA	False	NA	NA	False	ACTAAA	-41	NA	19293534	19295177	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_19293500_19295200
WTC11_00039830	chr17	+	440	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAACACACCCACGGCC	NA	False	NA	NA	False	NA	NA	NA	22521199	22521639	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_22521200_22521600
WTC11_00039833	chr17	+	307	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29885040	29885347	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_29885000_29885300
WTC11_00039834	chr17	+	239	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGATCCACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	30780971	30781210	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_30781000_30781200
WTC11_00039835	chr17	+	870	1	NIC	ENSG00000196712.19	novel	5082	13	NA	NA	4030	-1243	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCCCCATCCATCCTC	31345340	False	NA	NA	False	AATATA	-7	NA	31347037	31347907	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_31347000_31347900
WTC11_00039836	chr17	+	282	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGACTCGCAAAACACCG	NA	False	NA	NA	False	NA	NA	NA	31936304	31936586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_31936300_31936600
WTC11_00039838	chr17	+	267	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCATTCCTTTCTAAGG	NA	False	NA	NA	False	NA	NA	NA	37454325	37454592	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_37454300_37454600
WTC11_00039839	chr17	+	2117	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	38504987	38507104	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_38505000_38507100
WTC11_00039840	chr17	+	295	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATATATATAAATA	NA	False	NA	NA	False	NA	NA	NA	38945654	38945949	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_38945700_38945900
WTC11_00039842	chr17	+	217	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTTGTGGTGGAATG	NA	False	NA	NA	False	NA	NA	NA	40011766	40011983	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_40011800_40012000
WTC11_00039844	chr17	+	697	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGGTTTTTGGATCTG	NA	False	NA	NA	False	TATAAA	-29	NA	43345791	43346488	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_43345800_43346500
WTC11_00039847	chr17	+	416	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCTTGGCTCACTGCA	NA	False	NA	NA	False	NA	NA	NA	45524698	45525114	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_45524700_45525100
WTC11_00039851	chr17	+	259	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTGGCTTGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	53455833	53456092	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_53455800_53456100
WTC11_00039854	chr17	+	412	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATATTTGAAGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	60099909	60100321	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_60099900_60100300
WTC11_00039856	chr17	+	4143	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	62044279	62048422	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62044300_62048400
WTC11_00039857	chr17	+	1145	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	62057395	62058540	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62057400_62058500
WTC11_00039858	chr17	+	275	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCTGCAGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	68182472	68182747	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_68182500_68182700
WTC11_00039860	chr17	+	262	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	75110678	False	NA	NA	False	NA	NA	NA	75110688	75110950	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_75110700_75111000
WTC11_00039861	chr17	+	592	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTAGATTCCCATAG	76267475	False	NA	NA	False	GATAAA	-15	NA	76267490	76268082	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_76267500_76268100
WTC11_00039862	chr17	+	223	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACAGTCAAAGGGGTT	NA	False	NA	NA	False	GATAAA	-4	NA	76611016	76611239	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_76611000_76611200
WTC11_00039863	chr17	+	673	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81881760	81882433	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_81881800_81882400
WTC11_00039864	chr17	+	295	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCGGTATTCATTT	82498329	False	NA	NA	False	NA	NA	NA	82498370	82498665	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_82498400_82498700
WTC11_00039865	chr17	+	664	2	FSM	ENSG00000187624.9	ENST00000571106.1	736	2	-24	96	-12	-96	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGATTCTCAGTGAGT	NA	False	NA	NA	False	AATACA	-17	NA	410312	421001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_410647_420671
WTC11_00039866	chr17	+	2677	1	FSM	ENSG00000231784.8	ENST00000536214.1	2677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGTTCCTCTGCCCGC	752595	False	NA	NA	False	AGTAAA	-24	NA	752659	755336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_752700_755300
WTC11_00039868	chr17	+	1312	2	ISM	ENSG00000167711.14	ENST00000382061.5	2262	10	9589	8	9589	-8	3prime_fragment	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGGCCTGGCTGGTTTG	NA	False	NA	-6	True	AATAAA	-5	NA	1752614	1755257	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_1752791_1754121
WTC11_00039869	chr17	+	955	1	FSM	ENSG00000262333.1	ENST00000575692.1	955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAGGCAACAAAGCTTA	2305934	False	NA	NA	False	NA	NA	NA	2306760	2307715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2306800_2307700
WTC11_00039872	chr17	+	3751	9	NIC	ENSG00000141258.13	novel	4878	24	NA	NA	241	0	intron_retention	FALSE	canonical	3	98	junction_2	15.5317215723177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	2372090	False	NA	20	True	AATAAA	-16	NA	2372103	2381054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
WTC11_00039873	chr17	+	5494	12	FSM	ENSG00000007168.14	ENST00000675202.1	5491	12	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	206.337443271617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591601	True	NA	12	True	ATTAAA	-41	NA	2593946	2685608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2594007_2613657_2613863_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
WTC11_00039874	chr17	+	6954	28	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	-60	0	intron_retention	TRUE	canonical	1	5	junction_2	57.4921238716246	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGTGTTCAGAGTTCT	2755465	True	NA	26	True	AATAAA	-16	NA	2755644	3037738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2755768_2770328_2770446_2800514_2800551_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2985139_2985198_2991296_2991398_2995336_2995467_2998220_2998377_3005150_3005281_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
WTC11_00039875	chr17	+	7099	23	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57098	0	intron_retention	FALSE	canonical	3	24	junction_9	34.5348069715466	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGTGTTCAGAGTTCT	2853562	False	NA	26	True	AATAAA	-16	NA	2853579	3037738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985198_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
WTC11_00039876	chr17	+	4796	1	FSM	ENSG00000132359.15	ENST00000571555.1	4658	1	-135	-3	-135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	3032935	False	NA	29	True	AATAAA	-19	NA	3032945	3037741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3032900_3037700
WTC11_00039877	chr17	+	2418	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	-1	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21.1974841274462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3635602	True	NA	-9	True	NA	NA	NA	3636724	3661512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
WTC11_00039878	chr17	+	2476	11	NIC	ENSG00000040531.16	novel	4139	12	NA	NA	9	-6	intron_retention	FALSE	canonical	2	16	junction_4	14.1070904158157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTCTGTGTGCTCGA	3635648	True	NA	15	True	ATTAAA	-17	NA	3636770	3661536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
WTC11_00039879	chr17	+	1247	1	FSM	ENSG00000240898.1	ENST00000486753.1	483	1	-701	-63	-701	63	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGAGGAAGGGCTTG	NA	False	NA	NA	False	AATAAA	-39	NA	3664518	3665765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3664500_3665800
WTC11_00039881	chr17	+	419	1	FSM	ENSG00000274363.1	ENST00000616113.1	740	1	-284	605	-284	-605	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGACTAGAACCTTTAG	4267342	False	NA	NA	False	NA	NA	NA	4267406	4267825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4267400_4267800
WTC11_00039882	chr17	+	1918	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_1	8.06858356939596	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGGTTTGTCATTTCT	4583975	True	NA	8	True	CATAAA	-19	NA	4583998	4608318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
WTC11_00039883	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	4703968	True	NA	5	True	CATAAA	-17	NA	4704229	4705529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4704371_4705198
WTC11_00039885	chr17	+	2000	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	119.133093125089	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710285	False	NA	19	True	AATAAA	-15	NA	4710445	4721497	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
WTC11_00039886	chr17	+	1942	14	NNC	ENSG00000141480.18	novel	1778	15	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_12	159.478180140195	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710319	False	NA	19	True	AATAAA	-15	NA	4710479	4721497	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718353_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
WTC11_00039887	chr17	+	724	2	FSM	ENSG00000161920.11	ENST00000674339.1	706	2	-18	0	-18	0	multi-exon	FALSE	canonical	1	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTCACTGGG	4730107	True	NA	NA	False	AATAAA	-34	NA	4731409	4733608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4733049
WTC11_00039888	chr17	+	462	2	ISM	ENSG00000141497.14	ENST00000573751.2	2409	13	4690	3	1462	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTCATGGATCTTT	NA	False	NA	10	True	AATAAA	-16	NA	4745208	4746113	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_4745376_4745818
WTC11_00039889	chr17	+	2106	1	FSM	ENSG00000280254.1	ENST00000623798.1	2106	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCCCTCACGACTCAAG	NA	False	NA	NA	False	NA	NA	NA	4787056	4789162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4787100_4789200
WTC11_00039890	chr17	+	666	2	FSM	ENSG00000142507.10	ENST00000575643.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	7302	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTTTGTCACAGAGAA	4797672	False	NA	9	True	NA	NA	NA	4797683	4798475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4798154_4798279
WTC11_00039894	chr17	+	662	4	FSM	ENSG00000108515.18	ENST00000522425.5	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	10.6144555520604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGCTGTGTGCTTCTT	4955000	False	NA	7	True	AATAAA	-15	NA	4955799	4957127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4956144_4956572_4956682_4956830_4956890_4956977
WTC11_00039895	chr17	+	512	2	FSM	ENSG00000262227.1	ENST00000574260.1	551	2	39	0	39	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGGTTCCTTCTGGCTG	4987502	True	NA	NA	False	NA	NA	NA	4987744	4988446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4988226_4988415
WTC11_00039896	chr17	+	2548	1	FSM	ENSG00000234327.9	ENST00000623522.1	1646	1	-956	54	446	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACAGCCTTGCAGCCT	5112392	False	NA	NA	False	NA	NA	NA	5112402	5114950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5112400_5115000
WTC11_00039897	chr17	+	3001	1	Genic_Genomic	ENSG00000129204.17	novel	NA	NA	NA	NA	45211	1992	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTACTAAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5174025	5177026	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_+_5174000_5177000
WTC11_00039898	chr17	+	330	2	FSM	ENSG00000261879.8	ENST00000656594.1	789	2	0	459	0	-104	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTTTTCTTTTC	NA	False	NA	NA	False	AATGAA	-45	NA	5215186	5223539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5215294_5223316
WTC11_00039899	chr17	+	324	3	ISM	ENSG00000261879.8	ENST00000573772.3	1041	5	23239	301	59	-301	3prime_fragment	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCGCTCCTTATGAGAAT	NA	False	NA	NA	False	NA	NA	NA	5215245	5247881	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_5215294_5223316_5223485_5247773
WTC11_00039900	chr17	+	1564	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	118	junction_4	299.256996576521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
WTC11_00039901	chr17	+	1376	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	-17	0	-17	0	multi-exon	FALSE	canonical	2	3	junction_3	340.130122159153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
WTC11_00039902	chr17	+	1299	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	103	junction_3	360.243927776722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
WTC11_00039903	chr17	+	278	2	FSM	ENSG00000167842.16	ENST00000574186.1	267	2	-11	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGAGCTAAGAGGATCA	5483823	True	NA	NA	False	NA	NA	NA	5486565	5487159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5487000
WTC11_00039904	chr17	+	5803	9	FSM	ENSG00000179314.16	ENST00000574946.5	5884	9	81	0	70	0	multi-exon	FALSE	canonical	1	2	junction_1	33.6375441285478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	6069173	False	NA	21	True	AATAAA	-18	NA	6069186	6124427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6069208_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
WTC11_00039905	chr17	+	2108	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	-8	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATGTGTCTAAACAAT	6629682	True	NA	21	True	AATAAA	-15	NA	6641015	6643123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641000_6643100
WTC11_00039906	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1574.51163504399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	6641446	False	NA	18	True	AATAAA	-12	NA	6641465	6643120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
WTC11_00039908	chr17	+	1447	4	FSM	ENSG00000274114.2	ENST00000634558.1	1009	4	265	-703	-5	337	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATTTTGCACTAAATA	6656968	True	NA	25	True	AATAAA	-37	NA	6657298	6693914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6657405_6657644_6657784_6689875_6690028_6692864
WTC11_00039909	chr17	+	1269	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	15	331	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAAGATATTTTGCAC	6656988	True	NA	19	True	AATAAA	-31	NA	6657318	6693908	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_6657405_6657644_6657784_6692864
WTC11_00039911	chr17	+	996	7	ISM	ENSG00000262943.8	ENST00000574271.6	2490	15	40	4863	-1	366	5prime_fragment	TRUE	canonical	2	3	junction_2	5.18544972870135	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTGGAGAAAGAACTCCA	6853027	True	NA	NA	False	NA	NA	NA	6853928	6895482	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_6854061_6854213_6854436_6892002_6892076_6894317_6894520_6894883_6895007_6895095_6895200_6895342
WTC11_00039912	chr17	+	1314	7	ISM	ENSG00000262943.8	ENST00000570890.5	2209	13	2801	-3	-4	0	3prime_fragment	TRUE	canonical	3	8	junction_1	3.41565025531987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTATATGTGTGGTGGT	NA	False	NA	NA	False	ATTAAA	-9	NA	6896582	6900345	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_6896764_6898203_6898291_6898528_6898699_6898799_6898930_6899390_6899491_6899592_6899761_6899867
WTC11_00039913	chr17	+	776	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	-16	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	274.536427455447	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	7001886	True	NA	17	True	AATAAA	-13	NA	7014752	7017519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
WTC11_00039916	chr17	+	1539	10	ISM	ENSG00000072778.20	ENST00000356839.10	2184	20	-43	2029	0	0	intron_retention	FALSE	canonical	3	602	junction_1	56.8951819435975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGCCTCCCAAGCCCC	7207409	True	NA	NA	False	NA	NA	NA	7219894	7223237	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666
WTC11_00039917	chr17	+	2160	20	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_16	159.096618669355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCGCAAATAATAAAAATTTC	7207442	True	NA	-15	True	NA	NA	NA	7219927	7225236	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224483_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00039918	chr17	+	1717	1	FSM	ENSG00000279641.1	ENST00000624722.1	1615	1	33	-135	33	135	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGGTTTCCATGGAGT	7242218	False	NA	NA	False	NA	NA	NA	7242232	7243949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7242200_7243900
WTC11_00039919	chr17	+	674	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	424.850561962674	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	7251761	True	NA	37	True	AATAAA	-27	NA	7252052	7254913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
WTC11_00039920	chr17	+	2200	7	ISM	ENSG00000170291.16	ENST00000396627.7	1389	9	-34	9	-17	0	intron_retention	FALSE	canonical	3	20	junction_1	456.140938258731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251906	False	NA	NA	False	AATAAA	-19	NA	7252197	7259931	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
WTC11_00039921	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	458.592653912186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7245170	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
WTC11_00039922	chr17	+	1832	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	-49	-15	-31	-1	multi-exon	FALSE	canonical	2	5	junction_9	1.03040205505508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAACAGCTGGGACTCTC	7281260	True	NA	6	True	AATAAA	-23	NA	7281686	7286166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
WTC11_00039923	chr17	+	1197	1	ISM	ENSG00000181856.15	ENST00000317370.13	3375	11	5106	237	4694	187	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGGGCATTGCTCTTGG	7286397	False	NA	9	True	AATAAA	-13	NA	7286823	7288020	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7286800_7288000
WTC11_00039924	chr17	+	3207	1	FSM	ENSG00000072818.12	ENST00000570439.1	4898	1	1700	-9	-98	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGCCTGAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	7347030	7350237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7347000_7350200
WTC11_00039926	chr17	+	2734	13	NNC	ENSG00000174292.13	novel	2761	13	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.47031161033832	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAAAGTTACAAAGTTT	7380841	False	NA	22	True	NA	NA	NA	7381101	7389734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7381115_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386989_7387155_7387383_7387458_7388405_7388705_7388787_7388884_7388970
WTC11_00039928	chr17	+	5228	8	NNC	ENSG00000169992.10	novel	4980	7	NA	NA	-246	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	5.82745087267747	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	NA	False	NA	27	True	TATAAA	-13	NA	7404627	7419860	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7405611_7408579_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
WTC11_00039929	chr17	+	4980	7	FSM	ENSG00000169992.10	ENST00000302926.7	4980	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.98377435700541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	7407791	False	NA	27	True	TATAAA	-13	NA	7407844	7419860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
WTC11_00039930	chr17	+	1981	3	FSM	ENSG00000181284.3	ENST00000323206.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	45	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTCCAGCCTCGCTAT	7434588	True	NA	NA	False	NA	NA	NA	7435434	7437679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7435697_7435852_7436086_7436193
WTC11_00039932	chr17	+	2578	5	FSM	ENSG00000161958.11	ENST00000293829.9	2578	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	28.429737951659	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7438886	False	NA	20	True	ATTAAA	-20	NA	7439511	7444937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7439814_7441470_7441582_7441775_7441880_7442593_7442793_7443075
WTC11_00039933	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	26.8374738006393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7439965	True	NA	-15	True	NA	NA	NA	7440742	7444902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
WTC11_00039934	chr17	+	912	3	FSM	ENSG00000161958.11	ENST00000576328.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	32	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTGTCTTTTTATC	7439995	True	NA	NA	False	AAAAAG	-32	NA	7440772	7442532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7440817_7441470_7441582_7441775
WTC11_00039936	chr17	+	2466	9	ISM	ENSG00000170175.11	ENST00000306071.7	2560	11	740	97	258	-97	3prime_fragment	FALSE	canonical	3	105	junction_5	11.13552872566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7445694	False	NA	23	True	AATAAA	-32	NA	7445800	7457613	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
WTC11_00039937	chr17	+	1786	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	-407	-284	-407	-97	multi-exon	FALSE	canonical	3	144	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7455097	False	NA	23	True	AATAAA	-32	NA	7455186	7457613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7455942_7456582
WTC11_00039938	chr17	+	1567	7	NIC	ENSG00000161955.17	novel	1593	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	5.22812904711937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7558270	True	NA	10	True	AATAAA	-16	NA	7558301	7561601	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
WTC11_00039939	chr17	+	901	8	FSM	ENSG00000161956.13	ENST00000580231.5	901	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	197.290007194423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGCTACAGAAAAGCC	7564810	False	NA	NA	False	NA	NA	NA	7564842	7571670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7570355_7570494_7570680_7570765_7570882_7570934_7571372
WTC11_00039941	chr17	+	784	4	FSM	ENSG00000161960.16	ENST00000584712.5	782	4	-2	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	1906.73758609365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGATGTCAGAGCATGT	7340153	True	NA	NA	False	NA	NA	NA	7572823	7575679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118
WTC11_00039945	chr17	+	1102	7	FSM	ENSG00000129255.16	ENST00000572936.5	1102	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	188.171021502604	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTAGTGGAAACAA	7583619	False	NA	NA	False	NA	NA	NA	7583665	7587681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586655_7586778_7586898_7587018_7587160_7587272_7587425
WTC11_00039947	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	79.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	7687515	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
WTC11_00039950	chr17	+	2697	14	FSM	ENSG00000179593.16	ENST00000380183.9	2697	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	2.09535976490404	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCTGGTGGTATGTGG	8039032	True	NA	NA	False	AATAAA	-15	NA	8039058	8049134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046667_8046755_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
WTC11_00039951	chr17	+	2946	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	-1142	0	1142	multi-exon	TRUE	canonical	2	3	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCCTTTTGCAGCCTC	8079236	True	NA	NA	False	AATAAA	-19	NA	8079481	8082707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8079525_8079804
WTC11_00039953	chr17	+	1128	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	10	0	10	0	multi-exon	FALSE	canonical	1	3	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	10704895	False	NA	18	True	AATAAA	-22	NA	10704909	10711230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10705528_10706437_10706551_10710833
WTC11_00039954	chr17	+	2621	3	FSM	ENSG00000263400.8	ENST00000581366.5	562	3	6	-2065	6	0	multi-exon	FALSE	canonical	3	12	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTTTTGGCATAG	10729345	True	NA	4	True	AATAAA	-18	NA	10729782	10769071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10729877_10754228_10754363_10766678
WTC11_00039955	chr17	+	1419	3	NIC	ENSG00000263400.8	novel	575	4	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	2	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCACTGAGTTTTGGC	10729357	True	NA	0	True	AATAAA	-14	NA	10729794	10769067	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_10729877_10754228_10754363_10767864
WTC11_00039956	chr17	+	753	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGTTCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	11971991	11976909	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_11972336_11976500
WTC11_00039957	chr17	+	558	5	FSM	ENSG00000065559.15	ENST00000582183.5	551	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	24	junction_1	95.5441651802976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCCAAGACAAGAGATGC	12016277	True	NA	NA	False	NA	NA	NA	12020821	12113318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232
WTC11_00039958	chr17	+	3593	10	FSM	ENSG00000065559.15	ENST00000602375.5	1064	10	-81	-2448	-40	0	multi-exon	FALSE	canonical	2	14	junction_2	72.7568248039698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGTAATTTGATTT	12016244	True	NA	11	True	AATAAA	-15	NA	12020788	12143730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12054888_12054992_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
WTC11_00039959	chr17	+	666	5	FSM	ENSG00000006740.18	ENST00000538915.2	666	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	9.93415824315276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGATGAGTTTCTTT	NA	False	NA	13	True	ATTAAA	-13	NA	12949680	12959045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716
WTC11_00039961	chr17	+	1384	6	FSM	ENSG00000006695.12	ENST00000580561.1	1384	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	107.324927207057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCACTTGGTGGCCAGA	14065102	False	NA	NA	False	NA	NA	NA	14069603	14207585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14069649_14074322_14074457_14102117_14102243_14159876_14159948_14191988_14192222_14206809
WTC11_00039962	chr17	+	3142	1	ISM	ENSG00000125430.9	ENST00000360954.3	5369	2	45182	0	45180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTACCTTTATGTT	NA	False	NA	14	True	AATAAA	-15	NA	14346262	14349404	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_14346300_14349400
WTC11_00039966	chr17	+	870	6	NIC	ENSG00000187607.16	novel	5541	6	NA	NA	0	106	intron_retention	FALSE	canonical	2	5	junction_5	69.9531271638374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTACTTGGCTATTCA	15693770	True	NA	NA	False	GATAAA	-17	NA	15699752	15710044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15709815
WTC11_00039967	chr17	+	958	1	FSM	ENSG00000179277.9	ENST00000495167.3	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCCAGAGGGCCAGCC	15786270	False	NA	NA	False	NA	NA	NA	15786617	15787575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15786600_15787600
WTC11_00039968	chr17	+	2630	1	FSM	ENSG00000276855.1	ENST00000612568.1	690	1	0	-1940	0	1940	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTGCTTCCTTGTC	15788668	False	NA	NA	False	AATAAA	-25	NA	15789015	15791645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15789000_15791600
WTC11_00039971	chr17	+	965	5	FSM	ENSG00000108474.17	ENST00000498772.6	946	5	-19	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.6858551365813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACCTGACCATTTACTG	16214711	True	NA	NA	False	CATAAA	-9	NA	16217190	16317115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680
WTC11_00039972	chr17	+	1276	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	-19	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.4	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214711	True	NA	NA	False	NA	NA	NA	16217190	16326411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
WTC11_00039973	chr17	+	361	1	FSM	ENSG00000265095.1	ENST00000578296.1	449	1	45	43	45	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAACTGTCTTTTCCAA	16391468	False	NA	NA	False	NA	NA	NA	16391478	16391839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16391500_16391800
WTC11_00039974	chr17	+	2778	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	1	0	1	0	multi-exon	TRUE	canonical	1	3	junction_7	5.08749968660682	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	16415533	True	NA	15	True	AATATA	-17	NA	16415571	16437003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
WTC11_00039977	chr17	+	1005	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	-12	4	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1300.5817160025	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438974	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
WTC11_00039978	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1388.21414054172	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369181	True	NA	-17	True	AATAAA	-30	NA	16439000	16442028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
WTC11_00039980	chr17	+	3077	5	FSM	ENSG00000175061.19	ENST00000658943.1	3077	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1325.50714351149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAACACTAGGTTTAAA	16438824	True	NA	-47	True	AATGAA	-20	NA	16439390	16473052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16470301
WTC11_00039984	chr17	+	926	4	FSM	ENSG00000133030.22	ENST00000395807.2	926	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.7275116576683	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTGGCCAGGCATGG	17042720	False	NA	NA	False	AATAAA	-19	NA	17042759	17097337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17096767
WTC11_00039985	chr17	+	1735	6	NIC	ENSG00000205309.14	novel	1408	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	46.5084938478984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGGCCTGCCCTAA	17302580	True	NA	7	True	AATAAA	-22	NA	17303330	17347661	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344909_17346804
WTC11_00039987	chr17	+	1912	13	FSM	ENSG00000108591.10	ENST00000395726.8	1897	13	-15	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_12	67.6011074038157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAACGGTTCCTGTTCA	18083994	True	NA	-1	True	AATAAA	-4	NA	18087909	18107959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106471_18107153
WTC11_00039991	chr17	+	232	1	FSM	ENSG00000227077.3	ENST00000442562.1	210	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTGCTCGCTGGGTC	NA	False	NA	NA	False	NA	NA	NA	18572729	18572961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18572700_18573000
WTC11_00039992	chr17	+	2212	9	FSM	ENSG00000108448.23	ENST00000572555.5	1809	9	41	-444	29	-1	multi-exon	FALSE	canonical	2	6	junction_4	4.11551940828858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTATGTGCCAGATAC	18697625	True	NA	8	True	AATAAA	-15	NA	18698038	18736111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
WTC11_00039995	chr17	+	681	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	37	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	142.060550470565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	18778978	True	NA	NA	False	NA	NA	NA	18781179	18805661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
WTC11_00040000	chr17	+	1173	2	FSM	ENSG00000281856.1	ENST00000631194.1	1173	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19219142	19220473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19219476_19219633
WTC11_00040007	chr17	+	2542	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	-6	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	85.1694781010193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	20149795	True	NA	NA	False	AATAAA	-23	NA	20156082	20237179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
WTC11_00040013	chr17	+	3363	3	FSM	ENSG00000034152.19	ENST00000477540.1	927	3	-1633	-803	-1633	3	multi-exon	FALSE	canonical	3	166	junction_1	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTTGTGTGAGATTG	21310042	False	NA	87	True	ATTAAA	-20	NA	21310053	21315235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21312282_21313491_21313538_21314146
WTC11_00040016	chr17	+	391	1	FSM	ENSG00000239223.3	ENST00000475295.1	371	1	-20	0	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27274086	27274477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27274100_27274500
WTC11_00040019	chr17	+	2969	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	172.707702831356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281874	True	NA	38	True	ATTAAA	-20	NA	27294130	27313631	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
WTC11_00040022	chr17	+	1718	11	FSM	ENSG00000168961.17	ENST00000395473.7	1724	11	0	6	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.02654919008431	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTGGGTTGACCAT	27631171	False	NA	13	True	AATAAA	-23	NA	27631187	27649554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27631305_27638262_27638355_27640571_27640774_27642237_27642349_27643524_27643621_27645313_27645350_27645860_27645912_27646546_27646589_27647029_27647119_27647269_27647433_27648835
WTC11_00040028	chr17	+	410	2	NNC	ENSG00000265254.1	novel	493	2	NA	NA	618	0	intron_retention	FALSE	canonical	3	18	junction_1	0	86	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTCTGGTATATTCAA	28405597	True	NA	29	True	AAAAAG	-11	NA	28405857	28406796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28405987_28406515
WTC11_00040031	chr17	+	641	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	12918	junction_3	1686.96499337979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720100	False	NA	36	True	AATATA	-26	NA	28720566	28723936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
WTC11_00040033	chr17	+	3981	13	NNC	ENSG00000160602.14	novel	782	5	NA	NA	-617	0	intron_retention	FALSE	canonical	3	32	junction_3	9.99548509189135	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28727115	False	NA	12	True	AATAAA	-14	NA	28728170	28743455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28728257_28733982_28734189_28734771_28735372_28737305_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
WTC11_00040045	chr17	+	1362	5	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-304	0	intron_retention	FALSE	canonical	3	110	junction_1	109.007740550843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30705972	True	NA	17	True	AATATA	-18	NA	30708994	30770050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30769065_30769871
WTC11_00040046	chr17	+	1029	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	96	-2	intron_retention	FALSE	canonical	3	108	junction_1	101.162048219676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATTGCCTTTGTTTC	30709384	False	NA	15	True	AATATA	-16	NA	30709394	30770048	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
WTC11_00040050	chr17	+	8237	22	NIC	ENSG00000176208.9	novel	6873	23	NA	NA	0	1446	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	24.4413314859738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAAAATATTTAATAC	30828886	True	NA	NA	False	AATATA	-32	NA	30831965	30897315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495_30869647_30876373_30876551_30877415_30877550_30878002_30878097_30879422_30879488_30887191_30887373_30892606_30892789_30893293_30894151_30894563_30894723_30894834
WTC11_00040059	chr17	+	3518	14	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-520	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	21.1425144474295	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTTTAAAATTGTTAT	32007332	False	NA	-35	True	NA	NA	NA	32007351	32053360	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32008133_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
WTC11_00040061	chr17	+	2731	18	FSM	ENSG00000126858.19	ENST00000581094.5	3231	18	0	500	0	-500	multi-exon	FALSE	canonical	3	196	junction_2	13.8031138355479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTTCTATTTGTATT	32142618	False	NA	NA	False	NA	NA	NA	32142629	32209238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106
WTC11_00040064	chr17	+	641	3	FSM	ENSG00000006042.12	ENST00000583437.2	776	3	135	0	135	0	multi-exon	FALSE	canonical	3	550	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCCATCTTGAAGGTAA	32925682	False	NA	NA	False	NA	NA	NA	32931168	32934308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32931660_32933173_32933306_32934290
WTC11_00040068	chr17	+	1268	4	FSM	ENSG00000267364.3	ENST00000657419.1	1271	4	-5	8	-1	-8	multi-exon	FALSE	canonical	1	3	junction_1	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAACTTCTGGGTTAT	35313313	True	NA	NA	False	AATATA	-23	NA	35313490	35325440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35313645_35321734_35321866_35323147_35323344_35324653
WTC11_00040069	chr17	+	1199	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	12	8	-1	-8	multi-exon	FALSE	canonical	2	10	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAACTTCTGGGTTAT	35313313	True	NA	NA	False	AATATA	-23	NA	35313490	35325440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35313707_35323147_35323344_35324653
WTC11_00040071	chr17	+	2426	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_14	69.0255794053545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	35580371	True	NA	12	True	AATAAA	-24	NA	35587371	35660120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
WTC11_00040074	chr17	+	3225	3	FSM	ENSG00000273611.5	ENST00000617922.4	4420	3	1195	0	1195	0	multi-exon	FALSE	canonical	3	615	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTTCCTTTTTAA	36485695	False	NA	76	True	AATAAA	-18	NA	36490352	36495819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36492900_36493925_36494007_36495222
WTC11_00040075	chr17	+	2316	2	FSM	ENSG00000278311.5	ENST00000611219.1	2315	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATCTCAAAATAAC	36544711	False	NA	5	True	AATAAA	-17	NA	36544910	36547747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36545098_36545618
WTC11_00040076	chr17	+	2764	13	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	573	0	-12	0	3prime_fragment	FALSE	canonical	3	118	junction_6	45.2004025301644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	36545292	False	NA	NA	False	AATAAA	-28	NA	36545491	36589848	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
WTC11_00040077	chr17	+	2677	13	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_6	40.2977632409321	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	NA	False	NA	NA	False	AATAAA	-28	NA	36545584	36589848	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
WTC11_00040078	chr17	+	2255	2	FSM	ENSG00000276023.5	ENST00000614411.1	2207	2	-48	0	-48	0	multi-exon	FALSE	canonical	3	307	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTACTAATAATTTC	NA	False	NA	NA	False	AATAAA	-21	NA	37509830	37513501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37510765_37512180
WTC11_00040084	chr17	+	8286	22	NIC	ENSG00000275832.5	novel	5911	24	NA	NA	-1855	0	intron_retention	FALSE	canonical	3	23	junction_20	29.8630282040308	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	38455516	False	NA	28	True	AATAAA	-14	NA	38455544	38512385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38500596_38500629_38509943
WTC11_00040086	chr17	+	592	2	FSM	ENSG00000277972.2	ENST00000616128.1	773	2	181	0	181	0	multi-exon	FALSE	canonical	3	459	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCCCACGTGCTGCCT	38731265	False	NA	36	True	AAAACA	-40	NA	38731287	38733715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38731440_38733275
WTC11_00040088	chr17	+	1351	4	FSM	ENSG00000108298.12	ENST00000585199.2	1351	4	0	0	0	0	multi-exon	FALSE	canonical	3	13753	junction_3	773.832453872714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTATCCAAGGAGGAAG	39200793	False	NA	-42	True	NA	NA	NA	39200962	39204614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39201320_39202316_39203110_39204076_39204188_39204524
WTC11_00040095	chr17	+	3167	8	FSM	ENSG00000171475.14	ENST00000582781.5	3163	8	-4	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	26.6764437858802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATCACACACATCAC	40217228	True	NA	NA	False	NA	NA	NA	40219321	40279869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40219493_40256390_40256523_40260534_40260628_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
WTC11_00040103	chr17	+	4026	20	NIC	ENSG00000033627.17	novel	4110	21	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	3	30	junction_17	64.411764036241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	42450778	True	NA	16	True	AATAAA	-20	NA	42458851	42522578	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42513860_42513979_42514288_42514461_42521026
WTC11_00040109	chr17	+	293	2	FSM	ENSG00000126562.17	ENST00000592669.1	581	2	288	0	288	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAGTACGATGAGGC	42783851	False	NA	NA	False	NA	NA	NA	42783896	42784453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42784158_42784421
WTC11_00040114	chr17	+	2522	4	FSM	ENSG00000131471.7	ENST00000591562.1	2522	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	10.9645894689324	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTTTTTTTTTACTG	NA	False	NA	12	True	AATAAA	-24	NA	42854077	42858130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42854156_42854275_42854734_42855443_42855574_42856274
WTC11_00040118	chr17	+	1012	2	Antisense	novelGene_ENSG00000274452.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATGCAACGTATAGGT	NA	False	NA	NA	False	NA	NA	NA	43287969	43295116	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_43288651_43294785
WTC11_00040120	chr17	+	636	1	FSM	ENSG00000267496.4	ENST00000588043.3	755	1	1	118	1	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCCATCCGCATGGAGC	NA	False	NA	NA	False	GGGGCT	-15	NA	43917209	43917845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43917200_43917800
WTC11_00040122	chr17	+	2698	10	NNC	ENSG00000125319.15	novel	2698	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	34.2499887356925	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140500	True	NA	4	True	AATAAA	-14	NA	44141926	44162476	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150963_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
WTC11_00040123	chr17	+	2381	8	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	38.9594242089623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140595	True	NA	4	True	AATAAA	-14	NA	44142021	44162476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
WTC11_00040125	chr17	+	1573	6	FSM	ENSG00000168591.16	ENST00000446571.7	1580	6	7	0	5	0	multi-exon	FALSE	canonical	3	8	junction_4	35.8240142920918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGCCTGCAAGGGCAGC	44186955	False	NA	NA	False	NA	NA	NA	44186976	44191226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187110_44187675_44187744_44187906_44188010_44188934_44189300_44189410_44189589_44190500
WTC11_00040127	chr17	+	2399	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_2	29.7806797922561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	44185789	True	NA	-26	True	GGGGCT	-13	NA	44187205	44191691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44189021_44189589_44190500
WTC11_00040128	chr17	+	1973	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	-56	1	0	0	multi-exon	FALSE	canonical	3	37	junction_1	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	44185789	True	NA	-6	True	AATAAA	-2	NA	44187205	44191711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187401_44189021_44189589_44190500
WTC11_00040129	chr17	+	2296	3	ISM	ENSG00000168591.16	ENST00000587989.1	1969	4	157	23	0	0	3prime_fragment	FALSE	canonical	3	34	junction_1	36.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	44185789	True	NA	-26	True	GGGGCT	-13	NA	44187205	44191691	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_44187744_44189021_44189589_44190500
WTC11_00040130	chr17	+	1956	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_1	34.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185852	True	NA	9	True	AATAAA	-17	NA	44187268	44191726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187432_44189021_44189589_44190500
WTC11_00040134	chr17	+	2534	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	-140	0	intron_retention	FALSE	canonical	3	151	junction_1	210.590175986968	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACAGGGGTGTTTGTGT	44345048	True	NA	-42	True	NA	NA	NA	44345105	44353043	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
WTC11_00040137	chr17	+	921	4	FSM	ENSG00000167131.17	ENST00000410006.6	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGCAGGACCATAATA	44899393	True	NA	-84	True	NA	NA	NA	44899711	44902882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44899830_44900989_44901142_44901519_44901653_44902364
WTC11_00040143	chr17	+	2101	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	-11	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247464	True	NA	-16	True	NA	NA	NA	45247924	45269814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45248004_45267112_45267329_45268008
WTC11_00040145	chr17	+	9338	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	5	335	-1	-335	multi-exon	TRUE	canonical	3	26	junction_3	82.6599459633665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACCCACTGGGTCTCTG	45614524	True	NA	NA	False	NA	NA	NA	45620344	45654821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
WTC11_00040147	chr17	+	2111	1	FSM	ENSG00000204650.14	ENST00000580655.1	1942	1	-172	3	-172	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATTTCTCTGAGAGC	NA	False	NA	2	True	AATAAA	-17	NA	45640189	45642300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45640200_45642300
WTC11_00040148	chr17	+	9591	1	FSM	ENSG00000204650.14	ENST00000589868.1	2546	1	-2844	-4201	2465	-2739	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCTCTCAGGTTCAAGCA	NA	False	NA	NA	False	NA	NA	NA	45642826	45652417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45642800_45652400
WTC11_00040150	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.278719262151	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	45894657	False	NA	NA	False	NA	NA	NA	45894667	46024183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
WTC11_00040158	chr17	+	3435	5	FSM	ENSG00000108433.17	ENST00000638634.1	3446	5	11	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	149.204557571141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTGGCTCACTGCATC	46917715	True	NA	NA	False	NA	NA	NA	46923127	46941635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931101_46931208_46932066_46932200_46938598
WTC11_00040159	chr17	+	3818	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	-10	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	157.356879417457	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	46917715	True	NA	8	True	AATAAA	-20	NA	46923127	46942019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
WTC11_00040162	chr17	+	2302	8	FSM	ENSG00000108433.17	ENST00000640358.1	2313	8	11	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	142.107317883065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGATTTCTGTGATG	46917715	True	NA	1	True	ATTAAA	-1	NA	46923127	46966982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46963834_46965040_46966533
WTC11_00040164	chr17	+	568	5	FSM	ENSG00000178852.16	ENST00000520802.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	9.40744386111339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGGTAAATAAAGATTTG	47323225	True	NA	NA	False	AGTAAA	-5	NA	47323960	47342027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47324075_47324453_47324524_47326225_47326388_47328268_47328384_47341920
WTC11_00040166	chr17	+	5223	7	ISM	ENSG00000178852.16	ENST00000517484.5	3466	22	273	81379	273	7304	internal_fragment	FALSE	canonical	2	12	junction_1	6.99205898780101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTTTATTTAATGACAGGA	47323562	False	NA	NA	False	AATAAA	-18	NA	47324297	47349331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015
WTC11_00040170	chr17	+	1196	6	FSM	ENSG00000108439.11	ENST00000434554.7	1196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.9293383371972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGCTTAGTCCTAGC	47940192	True	NA	NA	False	NA	NA	NA	47941570	47947141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945860_47945990_47946322_47946394_47946613
WTC11_00040175	chr17	+	4878	6	NIC	ENSG00000082641.16	novel	4839	6	NA	NA	-107	0	intron_retention	FALSE	canonical	3	27	junction_2	76.7838524691227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGTGCACTTTTTCC	NA	False	NA	-9	True	AATAAA	-18	NA	48048221	48061480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48048463_48050606_48051629_48056418_48056599_48057031_48057122_48057343_48057503_48058294
WTC11_00040176	chr17	+	4645	5	NIC	ENSG00000082641.16	novel	4729	6	NA	NA	14	-1	intron_retention	FALSE	canonical	3	21	junction_1	78.3689192218446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTAAGTGCACTTTTT	48047574	True	NA	-11	True	AATAAA	-16	NA	48048797	48061478	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48048865_48050606_48051629_48056385_48056599_48057343_48057503_48058294
WTC11_00040177	chr17	+	3290	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	-22	-1986	0	272	multi-exon	FALSE	canonical	3	56	junction_2	30.8436919536772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCATTGAGCTGTTT	48107177	True	NA	NA	False	NA	NA	NA	48107765	48123873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
WTC11_00040192	chr17	+	2190	17	NIC	ENSG00000167107.13	novel	2251	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	11.6831542722845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCCACATTCCCCTGT	50425967	True	NA	-54	True	NA	NA	NA	50426215	50474774	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
WTC11_00040193	chr17	+	2254	17	FSM	ENSG00000167107.13	ENST00000427954.6	2251	17	-3	0	-2	0	multi-exon	TRUE	canonical	1	1	junction_1	14.7329085298864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	50425967	True	NA	9	True	CATAAA	-21	NA	50426215	50474837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50426390_50426904_50426980_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
WTC11_00040195	chr17	+	2609	16	FSM	ENSG00000006282.21	ENST00000356488.8	2634	16	25	0	-2	0	multi-exon	FALSE	canonical	3	6	junction_1	27.2929783399809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	50545213	True	NA	16	True	AATAAA	-22	NA	50547150	50555852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50547286_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
WTC11_00040201	chr17	+	7076	11	NIC	ENSG00000108848.16	novel	6987	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	72	junction_9	244.980591067946	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTTGGTGTAGGTAGT	50704664	True	NA	29	True	AATAAA	-23	NA	50719636	50756216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50749218_50749345_50750500
WTC11_00040203	chr17	+	788	5	FSM	ENSG00000108848.16	ENST00000503728.1	783	5	-5	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	255.102920406647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTAGCCTTTGGATTT	50746563	True	NA	-38	True	NA	NA	NA	50746613	50752585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
WTC11_00040216	chr17	+	1195	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	35.6431971068814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690429	True	NA	10	True	AATAAA	-21	NA	58692585	58734331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
WTC11_00040224	chr17	+	3571	25	NIC	ENSG00000141376.23	novel	3673	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_23	23.9882783875792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAGTTGCTGGGGTA	60677332	True	NA	27	True	AATAAA	-21	NA	60677886	61392830	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61388617_61388709_61391976
WTC11_00040233	chr17	+	1805	5	FSM	ENSG00000136463.9	ENST00000684587.1	1218	5	-204	-383	-2	347	multi-exon	FALSE	canonical	2	3	junction_1	99.7029964444399	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGAGCTGCTGTGCAA	63596615	True	NA	NA	False	NA	NA	NA	63600879	63608712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63601364_63604536_63604641_63606312_63606441_63607286_63607465_63607801
WTC11_00040242	chr17	+	8726	25	NIC	ENSG00000171634.19	novel	8295	30	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	78.6087246889442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTCAAAGTTTCCA	67819876	True	NA	14	True	ATTAAA	-14	NA	67825519	67960375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
WTC11_00040243	chr17	+	8683	25	NIC	ENSG00000171634.19	novel	8295	30	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	80.0296711469496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTCAAAGTTTCCA	67819892	False	NA	14	True	ATTAAA	-14	NA	67825535	67960375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
WTC11_00040244	chr17	+	9262	30	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	1	593	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	75.8825834331561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGAATGTGCGCTAAT	67823910	True	NA	18	True	AATAAA	-32	NA	67826033	67983162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
WTC11_00040245	chr17	+	11610	32	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	-30	43	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	80.6581666932643	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTATAGCTGTTAGCC	67823988	True	NA	53	True	AATGAA	-23	NA	67826111	67984421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
WTC11_00040246	chr17	+	8551	25	NIC	ENSG00000171634.19	novel	11292	30	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	2	18	junction_4	78.6002434085855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTCAAAGTTTCCA	67824000	True	NA	14	True	ATTAAA	-14	NA	67826123	67960375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540
WTC11_00040247	chr17	+	7913	24	NIC	ENSG00000171634.19	novel	8295	30	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	73.2185273071017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTCAAAGTTTCCA	67824020	False	NA	14	True	ATTAAA	-14	NA	67826143	67960375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
WTC11_00040251	chr17	+	2967	10	FSM	ENSG00000182481.10	ENST00000677086.1	2950	10	-17	0	-17	0	multi-exon	FALSE	canonical	3	4225	junction_5	297.746349916987	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979400	False	NA	19	True	AATAAA	-30	NA	68036013	68046854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
WTC11_00040257	chr17	+	2257	6	FSM	ENSG00000196704.14	ENST00000577985.5	2257	6	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_1	46.0929495693213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68249153	False	NA	20	True	AATAAA	-17	NA	68249199	68257155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
WTC11_00040259	chr17	+	1340	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	449.667254756225	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68495353	True	NA	18	True	AATAAA	-25	NA	68512423	68551319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
WTC11_00040270	chr17	+	2195	3	FSM	ENSG00000172794.20	ENST00000488977.1	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCCACTGTTTCT	74744819	True	NA	8	True	ATTAAA	-20	NA	74744840	74747334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74744930_74745007_74745085_74745305
WTC11_00040273	chr17	+	3641	6	ISM	ENSG00000170190.16	ENST00000329783.9	1940	7	-13	11	0	0	intron_retention	FALSE	canonical	3	54	junction_1	24.416387939251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTAGGAGG	75086258	True	NA	NA	False	AATAAA	-11	NA	75087940	75106151	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
WTC11_00040274	chr17	+	1089	6	NNC	ENSG00000170190.16	novel	1940	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	40.7332787779231	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTAGGAGGTTGGTTTGG	75086258	True	NA	NA	False	AATAAA	-20	NA	75087940	75106160	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75104021_75104181_75105879
WTC11_00040275	chr17	+	1990	7	NIC	ENSG00000170190.16	novel	1940	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	32.545694373023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086258	True	NA	NA	False	AATAAA	-22	NA	75087940	75106162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
WTC11_00040276	chr17	+	1142	6	NNC	ENSG00000170190.16	novel	1688	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	45.7951962546292	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTAGGAGGTTGGTTTG	75086289	True	NA	NA	False	AATAAA	-19	NA	75087971	75106159	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_75088045_75089113_75089305_75093592_75093836_75098037_75098182_75103969_75104181_75105879
WTC11_00040289	chr17	+	3519	26	NIC	ENSG00000073350.14	novel	3553	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_25	77.9957537305718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	75523633	True	NA	8	True	AATAAA	-16	NA	75525725	75575207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574873
WTC11_00040292	chr17	+	4349	28	ISM	ENSG00000266714.10	ENST00000633867.1	6323	51	13096	5249	-1213	0	internal_fragment	TRUE	canonical	2	8	junction_6	6.96197786569802	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTGCCCCAGCAGATG	NA	False	NA	-28	True	GGGGCT	-41	NA	75609485	75620872	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_75610260_75610899_75610960_75611600_75611659_75611885_75612017_75612797_75612894_75612973_75613210_75613292_75613472_75613704_75613778_75614198_75614361_75614582_75614684_75614772_75614850_75614960_75615043_75615239_75615339_75615502_75615601_75615692_75615885_75616068_75616148_75616311_75616447_75616523_75616786_75616873_75616962_75617084_75617305_75617809_75617923_75618125_75618186_75619142_75619219_75619357_75619477_75619680_75619800_75619878_75620021_75620245_75620358_75620466
WTC11_00040304	chr17	+	2391	11	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	80.5099372748483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976649	True	NA	18	True	AATAAA	-21	NA	75979232	76005998	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
WTC11_00040311	chr17	+	1174	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	-16	13	-16	0	multi-exon	FALSE	canonical	0	0	junction_4	86.1521183720981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTATTACAAGTACTTGGA	76724378	True	NA	NA	False	ATTAAA	-3	NA	76726813	76733866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
WTC11_00040315	chr17	+	1053	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	10	junction_3	92.4589999224882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724412	True	NA	NA	False	ATTAAA	-17	NA	76726847	76733880	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727214_76732977_76733216_76733292_76733382_76733520
WTC11_00040318	chr17	+	2850	14	FSM	ENSG00000092931.12	ENST00000621483.4	2850	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	15.992231842052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	76736335	True	NA	NA	False	NA	NA	NA	76736564	76779254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76737092_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
WTC11_00040321	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_17	44.4644409072048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135995	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
WTC11_00040325	chr17	+	1362	2	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGACTTATTTCTTG	77786945	True	NA	2	True	ATTAAA	-16	NA	77787417	77794327	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_77787546_77793093
WTC11_00040328	chr17	+	9740	21	FSM	ENSG00000078687.17	ENST00000335749.4	9740	21	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	17.1172427686237	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGGTTTGTGTTTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	78005055	78108835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78005080_78031515_78031843_78048844_78051449_78064721_78064938_78067756_78067924_78071084_78071166_78073036_78073095_78075135_78075279_78077184_78077335_78079394_78079542_78083046_78083167_78086502_78086587_78086852_78087094_78091439_78091608_78092932_78093125_78093619_78093764_78097744_78097862_78098342_78098538_78102473_78102545_78103413_78103554_78104484
WTC11_00040329	chr17	+	9632	20	FSM	ENSG00000078687.17	ENST00000301624.8	9632	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	23.6562407945949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGGTTTGTGTTTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	78005055	78108835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78005080_78031515_78031843_78048844_78051458_78064721_78064938_78067756_78067924_78071084_78071166_78073036_78073095_78075135_78075279_78077184_78077335_78079394_78079542_78083046_78083167_78086502_78086587_78086852_78087094_78091439_78091608_78092932_78093125_78093619_78093764_78098342_78098538_78102473_78102545_78103413_78103554_78104484
WTC11_00040333	chr17	+	3036	1	FSM	ENSG00000108639.8	ENST00000592456.1	3036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	78160678	False	NA	14	True	AATAAA	-14	NA	78169683	78172719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78169700_78172700
WTC11_00040335	chr17	+	1096	5	NIC	ENSG00000183077.16	novel	1686	11	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	22.1852991866236	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCGTTCATTTACGT	78179640	True	NA	10	True	AATAAA	-18	NA	78187374	78207702	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78206910
WTC11_00040341	chr17	+	4777	14	NNC	ENSG00000167280.17	novel	4603	14	NA	NA	129	0	intron_retention	FALSE	canonical	2	10	junction_5	21.0325192001654	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	79072678	True	NA	18	True	AATAAA	-18	NA	79074952	79088599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_79075091_79077429_79077498_79077662_79077865_79079488_79079638_79080206_79080365_79080502_79080608_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79083952_79084537_79084687_79085233_79085343_79085619
WTC11_00040348	chr17	+	12323	43	NNC	ENSG00000173821.20	novel	17730	69	NA	NA	1933	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	33.951813259129	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCTCTGGGGGCAGA	80339430	False	NA	13	True	AATAAA	-23	NA	80339446	80395312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_80340357_80343131_80343326_80343856_80344016_80344677_80348287_80349769_80349907_80350300_80350397_80351684_80351804_80352939_80353060_80353511_80353631_80354018_80354167_80354440_80354577_80358287_80358480_80360060_80360207_80361733_80361889_80363101_80363315_80363608_80363791_80364432_80364554_80367747_80367849_80367960_80368144_80369501_80369672_80369767_80369868_80371873_80371986_80372520_80372735_80372974_80373166_80374457_80374590_80375759_80375871_80376300_80376544_80376881_80376964_80377761_80377797_80379619_80379715_80380830_80380988_80381546_80381728_80382978_80383071_80383676_80383929_80385038_80385172_80385537_80385622_80386249_80386431_80386689_80386892_80388611_80388690_80389172_80389368_80389827_80389918_80390011_80390197_80393344
WTC11_00040351	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.0903233667185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	80414434	True	NA	7	True	AATAAA	-22	NA	80415166	80438086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
WTC11_00040353	chr17	+	1852	2	FSM	ENSG00000173818.17	ENST00000521847.5	1847	2	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGTATGTTAATT	80415249	True	NA	NA	False	TTTAAA	-7	NA	80415463	80418837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415822_80417343
WTC11_00040354	chr17	+	1473	7	FSM	ENSG00000173818.17	ENST00000522751.5	1475	7	2	0	2	0	multi-exon	FALSE	canonical	3	45	junction_1	13.3468681303476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTGCTCTTTTTTAT	80414584	False	NA	15	True	AATAGA	-5	NA	80415316	80430324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
WTC11_00040355	chr17	+	2572	8	FSM	ENSG00000173818.17	ENST00000518901.5	2549	8	-23	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	30.9489375373998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTGATTTTTTTTCT	80415249	True	NA	3	True	AATAAA	-18	NA	80415463	80438082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415611_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
WTC11_00040365	chr17	+	1781	15	FSM	ENSG00000169696.16	ENST00000580534.5	1776	15	-5	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	153.945806128292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	81974773	True	NA	9	True	AATAAA	-17	NA	81977628	82017404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81977749_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012155_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
WTC11_00040367	chr17	+	1125	5	NNC	ENSG00000169750.9	novel	1038	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	56.8303396083465	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	82021026	False	NA	23	True	AATAAA	-16	NA	82032184	82034204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_82032459_82032710_82032829_82032946_82033010_82033439_82033604_82033698
WTC11_00040371	chr17	+	4791	4	FSM	ENSG00000141526.18	ENST00000581287.5	4830	4	0	39	0	-39	multi-exon	FALSE	canonical	3	37	junction_2	6.68331255192114	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCCCTGCTCCTCTGCA	82233661	False	NA	NA	False	NA	NA	NA	82233686	82240047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82236232_82236728_82236873_82237137_82237894_82238701
WTC11_00040384	chr17	-	443	3	ISM	ENSG00000280279.1	ENST00000623180.1	2096	5	5380	1374	5380	-1374	3prime_fragment	FALSE	canonical	3	26	junction_2	28	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTCTCCAGGCCC	NA	False	NA	NA	False	NA	NA	NA	71486	65472	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_65737_65829_65888_71365
WTC11_00040385	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_213924_215653
WTC11_00040387	chr17	-	418	1	FSM	ENSG00000244097.1	ENST00000479057.1	754	1	-6	342	-6	-342	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCCTCATCAAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	657553	657135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_657100_657600
WTC11_00040388	chr17	-	4713	1	FSM	ENSG00000179409.11	ENST00000576778.1	4729	1	18	-2	18	2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTCTCTTCTAAGT	-749260	False	NA	-4	True	CATAAA	-20	NA	749333	744620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_744600_749300
WTC11_00040393	chr17	-	1773	8	NNC	ENSG00000108953.17	novel	1818	7	NA	NA	0	89605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5449.55995227774	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCATTAAATGGGATTAG	-1361551	True	NA	NA	False	AAAAAG	-5	NA	1400151	1254669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1254702_1342822_1342847_1344538_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00040397	chr17	-	4804	32	FSM	ENSG00000197879.17	ENST00000575158.5	4804	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_31	55.7595551603072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	-1484692	False	NA	0	True	AATAAA	-19	NA	1486201	1464185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1486054
WTC11_00040400	chr17	-	229	2	FSM	ENSG00000167703.15	ENST00000576769.1	565	2	336	0	336	0	multi-exon	FALSE	canonical	3	91	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTAAGTCCTGGAAGCC	NA	False	NA	NA	False	NA	NA	NA	1583362	1578253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1578324_1583203
WTC11_00040403	chr17	-	1204	4	FSM	ENSG00000174231.17	ENST00000572723.1	959	4	-36	-209	-36	0	multi-exon	FALSE	canonical	3	1241	junction_2	77.3864759933328	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGTTTGT	-1652127	False	NA	-10	True	AATAAA	-28	NA	1652182	1650630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647
WTC11_00040406	chr17	-	2853	1	FSM	ENSG00000070366.14	ENST00000574501.1	2419	1	14	-448	14	448	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTGGGGCTAGTGCC	NA	False	NA	NA	False	NA	NA	NA	2062243	2059390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2059400_2062200
WTC11_00040409	chr17	-	2545	15	NNC	ENSG00000167721.11	novel	4245	15	NA	NA	0	611	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	165.898619767665	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAAGACTTTTTTTTAG	-2321765	True	NA	-31	True	NA	NA	NA	2336443	2324079	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2324375_2324503_2324577_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
WTC11_00040410	chr17	-	3316	1	Genic_Genomic	ENSG00000127804.13	novel	NA	NA	NA	NA	7490	518	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGAAGCCATGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	2408359	2405043	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_2405000_2408400
WTC11_00040411	chr17	-	2768	11	NIC	ENSG00000127804.13	novel	5740	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	49.8822613761646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508366	True	NA	-7	True	AATAAA	-33	NA	2511878	2416048	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_2416698_2419659_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
WTC11_00040412	chr17	-	278	1	FSM	ENSG00000262480.2	ENST00000571429.2	661	1	390	-7	390	7	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCAGGGGTGGGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	2613554	2613276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2613300_2613600
WTC11_00040415	chr17	-	4772	8	NNC	ENSG00000197417.9	novel	3788	7	NA	NA	-39	2300	at_least_one_novel_splicesite	TRUE	canonical	1	18	junction_1	74.4289827243914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGAAGCCACTGAGA	-3629653	True	NA	NA	False	AATAAA	-29	NA	3636289	3605939	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3607619_3608973_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
WTC11_00040416	chr17	-	2842	1	NIC	ENSG00000257950.3	novel	5905	15	NA	NA	23362	-6928	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTTGGCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	3672832	3669990	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3670000_3672800
WTC11_00040417	chr17	-	1836	12	NNC	ENSG00000083454.22	novel	2060	12	NA	NA	222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.2897987077299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3695800	False	NA	0	True	AATAAA	-17	NA	3695811	3673226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695748
WTC11_00040418	chr17	-	2049	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	-18	0	0	multi-exon	FALSE	canonical	3	12	junction_9	11.894956914592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696205	False	NA	0	True	AATAAA	-17	NA	3696216	3673226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
WTC11_00040419	chr17	-	702	5	NNC	ENSG00000083457.12	novel	672	4	NA	NA	0	3257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.018416655564	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTGCTGGGCTCAGC	-3719091	True	NA	NA	False	NA	NA	NA	3723837	3711370	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3711401_3714627_3714943_3716687_3716799_3720306_3720403_3723687
WTC11_00040420	chr17	-	645	5	FSM	ENSG00000074356.17	ENST00000577169.1	645	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	90.8639092269312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGAATTATATGTAGT	-3826107	True	NA	NA	False	AATAAA	-22	NA	3826117	3822503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3822899_3824059_3824093_3824941_3825051_3825766_3825844_3826086
WTC11_00040421	chr17	-	3724	17	NIC	ENSG00000004660.15	novel	3572	16	NA	NA	-43	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	12.1615107511361	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTTTGTGCGTACAT	-3892854	True	NA	NA	False	AATAAA	-28	NA	3893096	3860319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882256_3882371_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
WTC11_00040423	chr17	-	1660	2	FSM	ENSG00000074370.18	ENST00000574999.1	776	2	297	-1181	297	4	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGCGTCTGTTTTCCT	NA	False	NA	-16	True	AATAAA	-27	NA	3928323	3923865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928239
WTC11_00040424	chr17	-	11440	55	NIC	ENSG00000074755.15	novel	11466	55	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_41	6.86267913306472	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTGTGTGGACTGGTC	-4142125	True	NA	NA	False	AATATA	-27	NA	4143001	4004444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4006971_4008882_4008955_4009603_4009758_4013448_4013615_4014089_4014189_4014346_4014516_4016322_4016467_4017370_4017731_4017835_4017972_4019668_4019770_4021128_4021321_4022708_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752_4062918_4064360_4064830_4066446_4066541_4067162_4067243_4070683_4070925_4072607_4072757_4074149_4074352_4075096_4075179_4075262_4075430_4076636_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436_4082508_4085669_4085804_4086485_4086656_4087433_4087535_4088677_4088894_4090718_4090831_4095830_4095980_4096608_4096701_4102316_4102416_4104632_4104812_4105692_4105810_4109652_4109864_4112608_4112809_4114298_4114471_4116971_4117167_4123906_4124052_4142541
WTC11_00040425	chr17	-	320	3	FSM	ENSG00000074755.15	ENST00000575428.1	563	3	243	0	243	0	multi-exon	FALSE	canonical	3	22	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGAGCTATGCCAAGC	NA	False	NA	NA	False	NA	NA	NA	4019769	4017647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4017731_4017835_4017972_4019668
WTC11_00040426	chr17	-	3827	21	FSM	ENSG00000074755.15	ENST00000574474.1	4047	21	19	201	19	-201	multi-exon	FALSE	canonical	1	3	junction_7	3.44818792991333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAAAAAAAAGAAAG	-4142125	True	NA	NA	False	NA	NA	NA	4143001	4076152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436_4082508_4085669_4085804_4086485_4086656_4087433_4087535_4088677_4088894_4090718_4090831_4095830_4095980_4096608_4096701_4102316_4102416_4104632_4104812_4105692_4105810_4109652_4109864_4112608_4112809_4114298_4114471_4116971_4117167_4123906_4124052_4142541
WTC11_00040428	chr17	-	4565	27	NNC	ENSG00000132382.15	novel	4558	26	NA	NA	0	66122	intron_retention	TRUE	non_canonical	0	0	junction_1	151.481930103656	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTGCCAAGCAAAAGAGCA	-4537434	True	NA	NA	False	NA	NA	NA	4555358	4472774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4472808_4538903_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
WTC11_00040429	chr17	-	697	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	1	0	-1	multi-exon	FALSE	canonical	1	7	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTCTCGCCTGTTTA	-4786258	False	18	0	True	ATTAAA	-15	NA	4786364	4785285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4785660_4785936_4786053_4786157
WTC11_00040431	chr17	-	587	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	-8	0	8	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGCTTGGTGGCGCGCT	-4954793	True	NA	NA	False	AATAAA	-42	NA	4967808	4965821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4966320_4967719
WTC11_00040432	chr17	-	4486	22	NIC	ENSG00000108509.21	novel	4515	23	NA	NA	-12	0	intron_retention	TRUE	canonical	3	41	junction_21	12.7761114954164	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCCTCTGTCTGCGG	-4987033	True	NA	2	True	ATTAAA	-19	NA	4987662	4967991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4968820_4968906_4968982_4969149_4969338_4969629_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982088_4982161_4982756_4982893_4982975_4983044_4985879_4985984_4986191_4986287_4987592
WTC11_00040433	chr17	-	437	5	FSM	ENSG00000108509.21	ENST00000572326.1	437	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.9525473836069	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCGTTGGAACCGAC	-4977940	False	NA	NA	False	NA	NA	NA	4978569	4972950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4972992_4973174_4973254_4974384_4974501_4977057_4977193_4978503
WTC11_00040434	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	52.083466666496	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	-5122894	True	NA	-23	True	NA	NA	NA	5123102	5105634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
WTC11_00040435	chr17	-	1907	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	65.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-6	True	CATAAA	-19	NA	5112064	5105734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109769_5111799
WTC11_00040437	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	49.5730773706858	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	-5416547	True	NA	NA	False	NA	NA	NA	5419662	5388375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
WTC11_00040438	chr17	-	2568	11	FSM	ENSG00000005100.13	ENST00000572490.1	2564	11	0	-4	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.58483105326173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGACCCTGTCAGTGC	-5463037	False	NA	NA	False	AGTAAA	-19	NA	5468748	5443488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5468570
WTC11_00040439	chr17	-	509	4	FSM	ENSG00000198920.11	ENST00000576281.5	508	4	0	-1	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.7033556081755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	NA	False	NA	-16	True	AATAAA	-24	NA	6594999	6578146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6578282_6589778_6590004_6590509_6590631_6594971
WTC11_00040440	chr17	-	5425	19	NIC	ENSG00000198920.11	novel	4647	19	NA	NA	-1756	-178	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	12.2771493051819	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGCCTATTTTAAATAAC	-6636918	False	NA	-17	True	AATAAA	-17	NA	6636929	6578325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6635897
WTC11_00040443	chr17	-	962	1	FSM	ENSG00000215067.11	ENST00000666062.1	1224	1	66	196	10	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGATAGAGACTACTTC	-7012449	False	NA	NA	False	NA	NA	NA	7012464	7011502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7011500_7012500
WTC11_00040444	chr17	-	1175	3	ISM	ENSG00000174326.15	ENST00000574600.3	1726	5	1035	9	549	-9	3prime_fragment	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAAACCTCCAACTGT	-7043001	True	NA	-25	True	AATAAA	-17	NA	7043057	7041629	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7041909_7041995_7042764_7042929
WTC11_00040446	chr17	-	1661	2	FSM	ENSG00000132535.22	ENST00000489885.1	1894	2	233	0	208	0	multi-exon	FALSE	canonical	3	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	7192002	7189889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7190815_7191266
WTC11_00040448	chr17	-	217	1	FSM	ENSG00000199053.3	ENST00000362183.3	83	1	-174	40	-174	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACCCACTGCCCCAGG	-7223538	False	NA	NA	False	NA	NA	NA	7223553	7223336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7223300_7223600
WTC11_00040449	chr17	-	1513	11	Fusion	ENSG00000004975.12_ENSG00000040633.13	novel	1136	10	NA	NA	-46	0	multi-exon	FALSE	non_canonical	0	0	junction_10	153.972757330639	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACACTCAGGGAGG	-7238613	False	NA	NA	False	NA	NA	NA	7238623	7227976	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230057_7230156_7230284_7230431_7230727_7230798_7234068_7234517_7238454
WTC11_00040450	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	232.270316657123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	-7239429	False	24148	-22	True	AATAAA	-26	NA	7239439	7235028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
WTC11_00040453	chr17	-	735	3	FSM	ENSG00000181885.18	ENST00000571881.2	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAACATTAAGTAAGTCT	-7262308	False	NA	NA	False	NA	NA	NA	7262343	7260653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7260727_7260820_7260986_7261846
WTC11_00040455	chr17	-	1234	11	NIC	ENSG00000132522.16	novel	1176	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_10	228.169323091427	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	-7310175	True	NA	-5	True	AATAAA	-17	NA	7315338	7312659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315251
WTC11_00040456	chr17	-	1615	8	ISM	ENSG00000132522.16	ENST00000577040.2	916	9	10	-577	9	0	intron_retention	FALSE	canonical	3	709	junction_5	73.9183222709156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-7310149	True	NA	-6	True	AATAAA	-16	NA	7315312	7312660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
WTC11_00040458	chr17	-	5203	29	NIC	ENSG00000215041.10	novel	5207	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_19	23.1147039958622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	-7328963	True	NA	-1	True	AATAAA	-18	NA	7329335	7315627	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324267_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
WTC11_00040462	chr17	-	1391	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	51	0	12	0	multi-exon	FALSE	canonical	3	10	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTATCTCATATTTAT	-7583709	False	345	-1	True	AATAAA	-24	NA	7583726	7581967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582532_7582899
WTC11_00040464	chr17	-	805	2	FSM	ENSG00000233223.4	ENST00000685745.1	1030	2	225	0	16	0	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGACTGCATTATCTCAT	-7583497	False	199	-7	True	AATAAA	-18	NA	7583514	7581973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582164_7582899
WTC11_00040466	chr17	-	1562	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTGTTGGGTCTTTCT	-7623650	True	NA	-3	True	AATAAA	-19	NA	7627796	7626234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626200_7627800
WTC11_00040467	chr17	-	2639	10	FSM	ENSG00000141510.18	ENST00000610292.4	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_9	47.1336424108468	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7681535	True	NA	7	True	AATAAA	-32	NA	7687481	7668401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
WTC11_00040468	chr17	-	1311	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	-76	-123	-76	123	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGGTTGTACCA	-7680501	False	NA	71	True	AGTAAA	-39	NA	7686447	7685136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7685100_7686400
WTC11_00040469	chr17	-	2683	2	FSM	ENSG00000179859.10	ENST00000324348.9	2850	2	92	75	92	-74	multi-exon	FALSE	canonical	1	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTTTTATCTCCAG	-7916180	False	NA	-81	True	NA	NA	NA	7916197	7913413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7915578_7915678
WTC11_00040470	chr17	-	2856	14	FSM	ENSG00000170049.10	ENST00000303790.3	2879	14	23	0	23	0	multi-exon	FALSE	canonical	2	7	junction_13	6.05692913385524	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTGTACTTCTCA	-7929810	False	12461	NA	False	TTTAAA	-16	NA	7929833	7921858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7923180_7923455_7923545_7923710_7923832_7923967_7924063_7924144_7924266_7924414_7924501_7925096_7925184_7925682_7925727_7925930_7925976_7926058_7926104_7927343_7927424_7927656_7927695_7927782_7927827_7929193
WTC11_00040471	chr17	-	1692	4	FSM	ENSG00000179111.9	ENST00000541682.7	1694	4	0	2	0	-2	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTGTGTGTTTTTGTC	-8123873	True	NA	NA	False	AATAAA	-15	NA	8124106	8120593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8122038_8122342_8122431_8123030_8123127_8124042
WTC11_00040476	chr17	-	12361	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	9	0	9	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-8376649	False	161459	NA	False	GATAAA	-1	NA	8376695	8358821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8370387_8375899
WTC11_00040479	chr17	-	4505	19	FSM	ENSG00000141506.15	ENST00000447110.6	4491	19	-14	0	-9	0	multi-exon	FALSE	canonical	2	12	junction_7	7.0858927837789	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	-8965396	True	NA	-6	True	AATAAA	-18	NA	8965721	8878915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
WTC11_00040480	chr17	-	4507	19	NIC	ENSG00000141506.15	novel	4491	19	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	7.39222982112942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	-8965401	True	NA	-6	True	AATAAA	-18	NA	8965726	8878915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886603_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
WTC11_00040481	chr17	-	210	1	FSM	ENSG00000273816.1	ENST00000614522.1	232	1	-164	186	-164	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGAAGGAAGGGCCTGTTG	NA	False	NA	NA	False	GGGGCT	-10	NA	9245061	9244851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9244900_9245100
WTC11_00040482	chr17	-	436	1	FSM	ENSG00000264176.1	ENST00000580926.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTGAATATTGATGTG	NA	False	NA	NA	False	ATTAAA	-6	NA	10716511	10716075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10716100_10716500
WTC11_00040484	chr17	-	1964	3	FSM	ENSG00000236088.11	ENST00000449363.2	1964	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTCAGTTTCATTG	-14068057	True	NA	0	True	NA	NA	NA	14069478	14029291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14030572_14033939_14034417_14069271
WTC11_00040485	chr17	-	547	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	-42	-46	-42	46	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATTGAAAAGATGAATA	-14705535	True	NA	NA	False	AATAAA	-21	NA	14705576	14705029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14705000_14705600
WTC11_00040486	chr17	-	1780	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	637	6	-1	0	multi-exon	FALSE	canonical	2	7	junction_4	4.03112887414927	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCTCTTGAGTTTTT	-15262480	True	NA	-1	True	AATAAA	-16	NA	15262553	15229778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
WTC11_00040487	chr17	-	692	2	FSM	ENSG00000125409.13	ENST00000470325.1	914	2	0	222	0	-222	multi-exon	FALSE	canonical	1	2	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGGGGGAAATGCA	-15331544	False	NA	NA	False	NA	NA	NA	15331614	15327991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15328076_15331006
WTC11_00040488	chr17	-	3030	4	NIC	ENSG00000239704.11	novel	632	3	NA	NA	-13447	-6	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	35.1093529798922	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	NA	False	NA	-11	True	AATAAA	-15	NA	15517055	15436020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15516418
WTC11_00040489	chr17	-	1010	7	NNC	ENSG00000175106.17	novel	4079	6	NA	NA	0	14252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.545561350471	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGATGTCTATTGAGTGC	-15562249	True	NA	NA	False	NA	NA	NA	15563544	15488011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_15488335_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
WTC11_00040491	chr17	-	2478	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	3	1	intron_retention	FALSE	canonical	3	29	junction_7	9.55824251627882	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGATACCGTTCTTA	-15683038	True	NA	-8	True	AATAAA	-23	NA	15684280	15627958	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
WTC11_00040492	chr17	-	3351	12	FSM	ENSG00000221926.13	ENST00000649191.2	3358	12	14	-7	0	1	multi-exon	FALSE	canonical	1	2	junction_6	16.9349753005356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGATACCGTTCTTA	-15683055	True	NA	-8	True	AATAAA	-23	NA	15684297	15627958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090_15651947_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
WTC11_00040493	chr17	-	966	6	NIC	ENSG00000214941.8	novel	969	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	238.961586871196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994714	True	NA	0	True	GATAAA	-32	NA	15999588	15976559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
WTC11_00040494	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	251.893151951378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994714	True	NA	0	True	GATAAA	-32	NA	15999588	15976559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
WTC11_00040495	chr17	-	878	6	NIC	ENSG00000214941.8	novel	918	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_3	222.668003988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994762	True	NA	0	True	AATAAA	-28	NA	15999636	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999518
WTC11_00040497	chr17	-	831	4	NIC	ENSG00000214941.8	novel	723	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_3	265.182955711712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994814	True	NA	0	True	AATAAA	-28	NA	15999688	15977726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15978164_15981039_15981145_15987265_15987369_15999502
WTC11_00040500	chr17	-	8532	47	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	3	126	junction_39	45.3964681387297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGTGGTTTAAGGCT	-16201089	True	NA	-3	True	AATAAA	-30	NA	16215523	16031393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00040501	chr17	-	8504	46	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_32	43.1069070115076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	-16201095	True	NA	-13	True	AATAAA	-20	NA	16215529	16031403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00040502	chr17	-	5100	33	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	8	-5976	combination_of_known_junctions	FALSE	canonical	3	123	junction_18	49.4632123400816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTCAGCTTTCTGTT	-16201087	True	NA	NA	False	AATAAA	-14	NA	16215521	16067842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00040506	chr17	-	1627	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_8	293.756012774756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272581	True	NA	-31	True	ATTAAA	-19	NA	17281191	17246834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
WTC11_00040508	chr17	-	959	7	NNC	ENSG00000133027.18	novel	1021	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	208.619603318789	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587525	True	NA	-7	True	AATAAA	-17	NA	17591650	17505562	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577024_17591530
WTC11_00040510	chr17	-	564	2	FSM	ENSG00000072310.18	ENST00000584760.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCAACAATGGCATCTT	-17816245	False	NA	NA	False	NA	NA	NA	17816338	17815596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17816029_17816206
WTC11_00040513	chr17	-	680	3	FSM	ENSG00000175662.18	ENST00000486413.1	680	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCACACGGCCTGCACA	NA	False	NA	NA	False	NA	NA	NA	17851303	17847551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822_17848860_17850892
WTC11_00040515	chr17	-	567	2	FSM	ENSG00000171953.16	ENST00000467560.5	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGCCCTGTTTTCA	NA	False	NA	-19	True	ATTAAA	-20	NA	18021264	18018261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18018687_18021122
WTC11_00040517	chr17	-	4001	29	FSM	ENSG00000177731.16	ENST00000545457.6	3975	29	0	-26	0	0	multi-exon	TRUE	canonical	0	0	junction_24	219.606059635365	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-18244418	True	NA	NA	False	ATTAAA	-24	NA	18258723	18244814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
WTC11_00040518	chr17	-	3714	30	NIC	ENSG00000177731.16	novel	4181	30	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	11	junction_24	214.292248244192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGAGCGGCCGCGCCGGC	-18244402	True	NA	NA	False	NA	NA	NA	18258707	18245243	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254179_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
WTC11_00040522	chr17	-	805	5	FSM	ENSG00000176974.21	ENST00000582653.1	879	5	74	0	74	0	multi-exon	FALSE	canonical	1	3	junction_4	163.461578054294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTATGCCCTACAAGGT	-18357034	False	NA	NA	False	AAGAAA	-25	NA	18363272	18347513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18362987
WTC11_00040527	chr17	-	586	5	FSM	ENSG00000108641.20	ENST00000646248.1	586	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	102.659631793612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCCTGGGGCTGCCT	-19356122	False	1754	-8	True	AATAAA	-17	NA	19357876	19343174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343496_19343789_19343858_19347268_19347332_19347783_19347881_19357839
WTC11_00040528	chr17	-	755	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	97.3192683901806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGAGTCAGACACCT	-19360915	True	NA	-14	True	ATTAAA	-23	NA	19362669	19346945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
WTC11_00040532	chr17	-	3909	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	-1	0	0	multi-exon	TRUE	canonical	2	14	junction_1	7.93180813225544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGTTCCTGTTTGC	-19867672	True	NA	0	True	AATAAA	-23	NA	19867936	19770828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
WTC11_00040533	chr17	-	492	7	FSM	ENSG00000083290.20	ENST00000571177.5	492	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.7709623886731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGTGAAACTAAGGAAAG	NA	False	NA	NA	False	AATAGA	-13	NA	19843138	19816465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19816489_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120
WTC11_00040535	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	-20009175	True	NA	NA	False	AATAAA	-36	NA	20009234	20008050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20008000_20009200
WTC11_00040536	chr17	-	1061	1	FSM	ENSG00000260907.1	ENST00000563569.1	840	1	-225	4	-225	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGTTTGTAGTCATTT	-20531085	False	NA	NA	False	AATAAA	-18	NA	20531106	20530045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20530000_20531100
WTC11_00040538	chr17	-	1426	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	10	-17	4	17	multi-exon	FALSE	canonical	2	6	junction_3	10.6144555520604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATAAACCATACGTTCC	-27893010	True	NA	19	True	AGTAAA	-35	NA	27893355	27878340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
WTC11_00040539	chr17	-	460	2	FSM	ENSG00000232859.10	ENST00000508816.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAGGGCATCCAGCAGC	-27883251	False	NA	NA	False	NA	NA	NA	27883297	27882611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27882713_27882938
WTC11_00040543	chr17	-	7381	39	NIC	ENSG00000007202.15	novel	7428	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	73.9046139747648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-28638813	True	NA	-7	True	AAAAAG	-16	NA	28645111	28614445	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617227_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00040544	chr17	-	7421	39	NNC	ENSG00000007202.15	novel	7428	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.3277109867424	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-28638856	True	NA	-7	True	AAAAAG	-16	NA	28645154	28614445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631679_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00040545	chr17	-	7421	39	NNC	ENSG00000007202.15	novel	7428	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	85.2081897212226	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-28638856	True	NA	-7	True	AAAAAG	-16	NA	28645154	28614445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617227_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631679_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
WTC11_00040550	chr17	-	4244	4	NIC	ENSG00000173065.14	novel	4168	5	NA	NA	-47	15	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	28.9942523039768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCGTTTAGTGCTGTG	NA	False	NA	-2	True	AGTAAA	-30	NA	28812482	28755964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28759765_28766585_28766708_28790377_28790426_28812208
WTC11_00040551	chr17	-	4122	3	NIC	ENSG00000173065.14	novel	4246	3	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGCTTTCTGACCTTGTT	-28807343	True	NA	-21	True	AGTAAA	-11	NA	28812427	28755983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28759765_28766585_28766708_28812208
WTC11_00040553	chr17	-	2587	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	-2	0	0	multi-exon	FALSE	canonical	2	36	junction_9	411.833716443907	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886313	True	NA	-7	True	AATAAA	-17	NA	28897652	28879338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
WTC11_00040555	chr17	-	297	2	FSM	ENSG00000167536.14	ENST00000581974.1	467	2	170	0	170	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGGTGCTCCGGGCAC	-28899335	False	NA	NA	False	NA	NA	NA	28899353	28898822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28898893_28899126
WTC11_00040557	chr17	-	5575	1	FSM	ENSG00000221995.5	ENST00000359450.6	5337	1	-236	-2	-236	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCAGTTTTCCTGCCTG	-29079083	False	NA	-14	True	AATAAA	-19	NA	29079093	29073518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29073500_29079100
WTC11_00040559	chr17	-	3401	12	FSM	ENSG00000108262.16	ENST00000473217.5	3462	12	65	-4	65	4	multi-exon	FALSE	canonical	3	267	junction_4	15.257568234478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGATGCTTAGAGAATG	-29579231	False	NA	-3	True	AATAAA	-18	NA	29579265	29573470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574915_29575078_29575143_29575287_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730
WTC11_00040562	chr17	-	2372	7	FSM	ENSG00000167549.19	ENST00000469090.5	2378	7	0	6	0	0	multi-exon	TRUE	canonical	1	7	junction_6	4.95815826021451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTATGAAGCCTCTTTT	-29617654	False	463	0	True	AGTAAA	-18	NA	29618117	29614761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29615855_29615944_29616176_29616278_29616337_29616701_29616848_29616937_29617043_29617241_29617341_29617477
WTC11_00040568	chr17	-	492	3	FSM	ENSG00000264107.1	ENST00000583377.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAATAAATAAATG	-31095168	True	NA	-53	True	NA	NA	NA	31095450	31090786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31090936_31093372_31093492_31095226
WTC11_00040572	chr17	-	1779	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	68	0	1	multi-exon	TRUE	canonical	1	2	junction_11	3.39334538463274	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTCTTAATAGTCTCAAA	-34961318	True	NA	-8	True	AATAAA	-17	NA	34961460	34927928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
WTC11_00040573	chr17	-	4133	6	NIC	ENSG00000092871.17	novel	7293	7	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	25.4903903461677	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTCTGGTGCGAG	-35088397	True	NA	NA	False	AATAAA	-16	NA	35089307	35009113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_35012150_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
WTC11_00040583	chr17	-	1160	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	3	0	-1	0	multi-exon	FALSE	canonical	2	13	junction_2	13.5451918488526	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930411	True	NA	-17	True	AATAAA	-16	NA	35930770	35918079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
WTC11_00040584	chr17	-	1535	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	14.6205335059977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930410	True	NA	-17	True	AATAAA	-16	NA	35930769	35918079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
WTC11_00040587	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	8.06225774829855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	-35930381	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
WTC11_00040591	chr17	-	4099	27	NIC	ENSG00000278259.5	novel	3931	26	NA	NA	9	21	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	48.8219352437687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGTGCTCCAAATGCAC	-36529956	True	NA	NA	False	NA	NA	NA	36534887	36496163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36512657_36512780_36512873_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
WTC11_00040593	chr17	-	639	2	FSM	ENSG00000277268.2	ENST00000614277.1	640	2	-16	17	-4	-17	multi-exon	FALSE	canonical	2	3	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGCATGAATATACAT	-36936632	True	NA	NA	False	AATAAA	-3	NA	36936674	36907011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36907540_36936563
WTC11_00040595	chr17	-	9531	55	NIC	ENSG00000278540.5	novel	9554	56	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_15	79.3393416820807	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAGTTTGTCATTTCA	-37351777	True	NA	-24	True	AATAAA	-19	NA	37359116	37084992	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37358998
WTC11_00040598	chr17	-	7993	22	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	0	0	intron_retention	TRUE	canonical	3	23	junction_8	26.8655846239796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-37604651	True	NA	-14	True	AATACA	-13	NA	37609411	37514806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542428_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596342_37600362_37600404_37609278
WTC11_00040599	chr17	-	4291	21	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	27.4763079761456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTTCTGCTTTTTA	-37604613	True	NA	NA	False	AATAAA	-19	NA	37609373	37518462	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
WTC11_00040604	chr17	-	739	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	485	0	0	0	3prime_fragment	FALSE	canonical	3	38	junction_2	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451493	False	NA	NA	False	AATAAA	-33	NA	38451946	38450393	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_38450724_38451305_38451394_38451625
WTC11_00040605	chr17	-	1131	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-283	2	155	-2	multi-exon	FALSE	canonical	3	46	junction_2	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGGCTCAAAGAGAAC	-38451755	False	NA	NA	False	AATAAA	-31	NA	38452208	38450395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451305_38451526_38451625
WTC11_00040606	chr17	-	4790	15	FSM	ENSG00000277363.5	ENST00000622190.4	4635	15	-155	0	-155	0	multi-exon	TRUE	canonical	2	3	junction_1	2.49897938350513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTATTTTATTTTA	NA	False	NA	-6	True	AATAAA	-16	NA	38563579	38541280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38543137_38543822_38543970_38548556_38548710_38549055_38549211_38551154_38551390_38551885_38552133_38552446_38552595_38552724_38552856_38558226_38558403_38559584_38559773_38560053_38560098_38560332_38560426_38561462_38562329_38562826_38562921_38563322
WTC11_00040609	chr17	-	2541	10	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	48.2907858705985	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	NA	False	NA	-4	True	AATAAA	-15	NA	38748336	38733897	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
WTC11_00040610	chr17	-	3175	11	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.5030378578661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	-38824902	True	NA	-8	True	AATAAA	-30	NA	38825304	38800440	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810401_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
WTC11_00040612	chr17	-	5576	14	FSM	ENSG00000161381.14	ENST00000315392.9	6230	14	232	422	114	-422	multi-exon	TRUE	canonical	1	1	junction_3	3.09991410455537	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAAAGATCTGGGGACT	-39151339	False	NA	NA	False	NA	NA	NA	39151405	39063734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
WTC11_00040614	chr17	-	3422	11	FSM	ENSG00000141750.7	ENST00000333461.6	3430	11	11	-3	11	3	multi-exon	FALSE	canonical	0	0	junction_1	1.36014705087354	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCTGTGTCTCTCA	-39225763	True	NA	-1	True	ATTAAA	-18	NA	39225934	39210537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39212397_39212994_39213133_39213506_39213559_39214232_39214331_39214790_39214862_39214950_39215024_39215117_39215231_39216809_39216901_39217075_39217174_39217866_39218174_39225412
WTC11_00040615	chr17	-	2755	18	NNC	ENSG00000125686.12	novel	2870	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	5.54066439497253	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-39445634	True	NA	-32	True	AATAAA	-20	NA	39451252	39404284	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_39405210_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
WTC11_00040619	chr17	-	1468	10	FSM	ENSG00000073605.19	ENST00000360317.7	1468	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	13.7679176187089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	-39917288	False	NA	0	True	ATTAAA	-23	NA	39917316	39904594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39908175_39908215_39908957_39909043_39909755_39909925_39912325_39912498_39917081
WTC11_00040620	chr17	-	3556	27	NIC	ENSG00000008838.21	novel	3037	26	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_20	68.5134742502973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049926	True	NA	-1	True	AATAAA	-29	NA	40054393	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40034915_40034973_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
WTC11_00040621	chr17	-	3610	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	3	11	junction_25	54.6505407109573	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049926	True	NA	-1	True	AATAAA	-29	NA	40054393	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053769_40054360
WTC11_00040622	chr17	-	3511	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	118	junction_25	37.5809313349204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGGTATTGGTGC	-40049938	True	NA	-1	True	AATAAA	-29	NA	40054405	40019091	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
WTC11_00040623	chr17	-	3482	26	NNC	ENSG00000008838.21	novel	3896	25	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_25	68.5798104400996	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTGTTGGTATT	-40049871	True	NA	-6	True	AATAAA	-24	NA	40054338	40019096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40019646_40019784_40019934_40020272_40020351_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054314
WTC11_00040624	chr17	-	882	3	FSM	ENSG00000131747.15	ENST00000578412.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_2	45.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGTACCTGGAAGAGT	-40391969	False	NA	NA	False	AAGAAA	-3	NA	40392101	40389561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40389648_40389964_40390165_40391505
WTC11_00040625	chr17	-	5796	9	FSM	ENSG00000073584.20	ENST00000643318.1	5796	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	379.874239058139	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTAGCCAAACGCTGAT	-40648599	True	NA	-41	True	NA	NA	NA	40648654	40625002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645795_40645848_40647772
WTC11_00040627	chr17	-	2703	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.4142135623731	557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-40665089	True	NA	NA	False	AATAAA	-19	NA	40665177	40654664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
WTC11_00040629	chr17	-	868	3	FSM	ENSG00000171345.13	ENST00000468880.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGGGTGTCTTCTGGG	-41522584	False	103	-103	True	GGGGCT	-11	NA	41524993	41523713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41524269_41524378_41524541_41524842
WTC11_00040630	chr17	-	684	4	FSM	ENSG00000128422.18	ENST00000649249.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1.63299316185545	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCCTTGCCTGATGAC	-41621163	True	NA	-45	True	NA	NA	NA	41621201	41619484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965
WTC11_00040634	chr17	-	4473	30	NNC	ENSG00000131473.17	novel	4309	29	NA	NA	-77	45805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	429.950548825323	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTCTCAGCCCCTC	-41919035	False	NA	NA	False	NA	NA	NA	41919099	41821111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41821141_41866918_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
WTC11_00040636	chr17	-	1563	9	FSM	ENSG00000187595.17	ENST00000436535.5	2893	9	9	1321	3	-1272	multi-exon	FALSE	canonical	2	3	junction_5	11.409973707244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCATGGGGAGGCCAGAG	-42098362	False	108	NA	False	NA	NA	NA	42098470	42026896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42027134_42027632_42027729_42028049_42028247_42028782_42029077_42031618_42031785_42034224_42034336_42037736_42037886_42062806_42063059_42098409
WTC11_00040639	chr17	-	1632	7	ISM	ENSG00000108771.13	ENST00000251642.8	2591	14	4873	-4	7	-3	3prime_fragment	FALSE	canonical	1	2	junction_5	22.637849328552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGGTGTCTTAATT	-42107733	True	NA	-3	True	AATAAA	-18	NA	42107841	42101406	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42105735_42105990_42107603
WTC11_00040651	chr17	-	1552	6	FSM	ENSG00000267060.7	ENST00000424284.5	1446	6	-119	13	-119	2	multi-exon	FALSE	canonical	2	4	junction_5	10.1074230147946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTCTTGAACTCATGG	-42979757	False	NA	-11	True	AATAAA	-16	NA	42979783	42968100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979627
WTC11_00040660	chr17	-	5078	3	FSM	ENSG00000267002.4	ENST00000590740.2	5084	3	0	6	0	-6	multi-exon	FALSE	canonical	2	3	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTAACTCGGTGTCTGA	-43170337	False	NA	-6	True	AATAAA	-9	NA	43170403	43160295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43164813_43166979_43167263_43170125
WTC11_00040662	chr17	-	533	2	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGCGGGGCATGCAAA	-43242092	False	NA	NA	False	NA	NA	NA	43242142	43234211	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_43234374_43241771
WTC11_00040669	chr17	-	872	5	FSM	ENSG00000188825.15	ENST00000656704.1	874	5	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCCCTGCGTGAATTAC	-43388224	True	NA	NA	False	AATAAA	-19	NA	43388314	43375931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43376107_43377670_43377814_43379122_43379263_43381272_43381661_43388288
WTC11_00040670	chr17	-	2097	11	NNC	ENSG00000175832.13	novel	2147	12	NA	NA	1109	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	454.949678535989	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCTCCTGTGTCCTCTT	-43544257	False	105	-5	True	AATAAA	-19	NA	43544293	43527844	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43542970_43543047_43544199
WTC11_00040671	chr17	-	2031	10	NNC	ENSG00000175832.13	novel	2147	12	NA	NA	1099	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	369.996329644792	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCTCCTGTGTCCTCTT	-43544267	False	105	-5	True	AATAAA	-19	NA	43544303	43527844	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544199
WTC11_00040674	chr17	-	2296	13	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_4	281.088200372924	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCTCCTGTGTCCTCTT	-43540441	True	NA	-5	True	AATAAA	-19	NA	43546315	43527844	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530121_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
WTC11_00040675	chr17	-	2315	13	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	348.248504423685	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43540447	True	NA	-4	True	AATAAA	-20	NA	43546321	43527843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533983_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
WTC11_00040683	chr17	-	3740	27	NNC	ENSG00000108840.16	novel	5319	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_19	93.1526789611181	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTGCCGTGTGGGTC	-44118621	True	NA	35	True	ATTAAA	-22	NA	44123618	44078293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092395_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
WTC11_00040687	chr17	-	4915	21	NIC	ENSG00000108312.15	novel	4795	21	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_20	112.929801204111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-44220970	False	NA	-13	True	AATAAA	-13	NA	44221090	44205039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
WTC11_00040689	chr17	-	1994	15	NIC	ENSG00000108312.15	novel	2683	20	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	150.003418328397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTCCCAGAGCCAGAAG	-44219630	False	NA	NA	False	NA	NA	NA	44219750	44209440	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44216528_44216705_44218171_44218297_44219444
WTC11_00040690	chr17	-	1915	4	ISM	ENSG00000161682.15	ENST00000588067.1	964	6	-17	1499	2	-1499	5prime_fragment	FALSE	canonical	3	36	junction_1	49.2363912388207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTGTATTGGAATTG	-44361315	True	NA	-15	True	AATAAA	-12	NA	44363851	44357804	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_44359144_44359578_44359672_44359904_44360133_44363596
WTC11_00040691	chr17	-	497	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	-1	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	-44375804	False	380	-35	True	AATAAA	-17	NA	44376184	44372179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44372424_44375832_44375986_44376084
WTC11_00040693	chr17	-	955	7	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	13465	0	0	0	3prime_fragment	FALSE	canonical	2	47	junction_2	14.5792851524194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375804	False	380	-36	True	AATAAA	-16	NA	44376184	44372180	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084
WTC11_00040694	chr17	-	850	6	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	23.5151015307185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375801	False	380	-36	True	AATAAA	-16	NA	44376181	44372180	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44372424_44374353_44374471_44374997_44375112_44375590_44375717_44375832_44375986_44376084
WTC11_00040709	chr17	-	3226	2	NNC	ENSG00000214425.9	novel	1397	7	NA	NA	-5454	-5080	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAGAACCTGTAA	NA	False	NA	NA	False	NA	NA	NA	45520610	45513391	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_45514596_45518588
WTC11_00040710	chr17	-	1397	7	FSM	ENSG00000214425.9	ENST00000661058.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.14239210126832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGCTTTCACAAAACTCG	NA	False	NA	NA	False	NA	NA	NA	45551537	45518635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45519519_45521306_45521426_45539162_45539244_45539891_45539964_45542763_45542836_45545604_45545677_45551439
WTC11_00040712	chr17	-	4973	15	FSM	ENSG00000120071.15	ENST00000572904.6	4973	15	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_14	18.8933634822778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	-46221555	False	NA	-8	True	AATAAA	-17	NA	46223676	46029915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670
WTC11_00040716	chr17	-	714	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	2	12335	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	123.103614894121	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGGTGTTCTATGGC	-46579634	False	NA	NA	False	AATAAA	-27	NA	46579655	46504366	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_46504610_46517093_46517234_46570758_46570870_46576174_46576340_46579600
WTC11_00040719	chr17	-	770	3	FSM	ENSG00000262879.6	ENST00000572864.5	370	3	-324	-76	16	76	multi-exon	FALSE	canonical	2	3	junction_1	10	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCGTAGGCCATGACAG	-47099053	True	NA	NA	False	NA	NA	NA	47100273	47071369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47071613_47072471_47072560_47099834
WTC11_00040720	chr17	-	680	3	FSM	ENSG00000262879.6	ENST00000576938.1	372	3	-291	-17	7	-11	multi-exon	FALSE	canonical	3	15	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCCCAACTGCCTGAA	-47099012	True	NA	NA	False	AATAAA	-6	NA	47100232	47071456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47071651_47072471_47072560_47099834
WTC11_00040739	chr17	-	688	3	FSM	ENSG00000159210.10	ENST00000515572.5	687	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1569	junction_2	59.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTCCAAGTTTTTC	-48933555	False	NA	16	True	AATAAA	-32	NA	48933591	48930386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48930613_48931642_48931718_48933204
WTC11_00040753	chr17	-	890	4	FSM	ENSG00000108826.16	ENST00000511860.1	869	4	0	-21	0	0	multi-exon	FALSE	canonical	3	93	junction_3	653.314795655373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50360506	False	NA	-13	True	AATAAA	-38	NA	50371163	50367866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50370905
WTC11_00040768	chr17	-	1545	2	NNC	ENSG00000214226.9	novel	2037	8	NA	NA	-17	-7299	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGAGGCGGAGGTTG	-56833135	True	NA	NA	False	NA	NA	NA	56833937	56832045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_56833343_56833689
WTC11_00040773	chr17	-	6001	3	NIC	ENSG00000266086.3	novel	711	3	NA	NA	8748	0	combination_of_known_splicesites	FALSE	canonical	3	224	junction_1	115.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTTGTTTTTATTTTT	-57996494	False	NA	-2	True	ACTAAA	-26	NA	57996505	57989037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_57989267_57989648_57989797_57990881
WTC11_00040778	chr17	-	1504	7	FSM	ENSG00000005379.17	ENST00000578511.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	5.67890834580027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATCCTGTCTTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	58306867	58301851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58302448_58304337_58304400_58305060_58305172_58305386_58305459_58305539_58305644_58305832_58305866_58306341
WTC11_00040779	chr17	-	1400	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_2	275.531405751786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGCCATTTTTCAATA	-58340863	True	NA	-2	True	TATAAA	-23	NA	58352167	58345175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
WTC11_00040783	chr17	-	1349	11	NIC	ENSG00000108387.16	novel	1530	12	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	16.4255897915417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTGTCCCTGTGTGT	-58531541	True	NA	-11	True	AATAAA	-22	NA	58532060	58520256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531960
WTC11_00040790	chr17	-	4114	1	FSM	ENSG00000141378.15	ENST00000470557.2	4114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGGTTGGCAGTTGT	-59701358	False	NA	-11	True	AATAAA	-13	NA	59701425	59697311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59697300_59701400
WTC11_00040803	chr17	-	3693	1	FSM	ENSG00000266173.7	ENST00000583085.1	3685	1	0	-8	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	NA	False	NA	-23	True	ATTAAA	-25	NA	63706524	63702831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63702800_63706500
WTC11_00040810	chr17	-	1248	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	-2	0	2	multi-exon	TRUE	canonical	1	3	junction_5	6.93974062915899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCTCGTGGCATCTTA	-63932237	True	NA	-1	True	AATAAA	-23	NA	63932331	63928737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
WTC11_00040811	chr17	-	1256	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	-2	0	2	multi-exon	FALSE	canonical	2	9	junction_5	4.81663783151692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCTCGTGGCATCTTA	-63932242	True	NA	-1	True	AATAAA	-23	NA	63932336	63928737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
WTC11_00040817	chr17	-	5034	13	FSM	ENSG00000108654.16	ENST00000676575.1	5031	13	0	-3	0	0	multi-exon	FALSE	canonical	1	23	junction_2	1029.8208683229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64506482	False	408	-6	True	AATAAA	-18	NA	64506521	64498253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64501892_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00040818	chr17	-	3815	12	FSM	ENSG00000108654.16	ENST00000578491.2	3815	12	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1069.4109987734	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTACAGTGATTTGAAA	-64506482	False	408	43	True	NA	NA	NA	64506521	64499694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64501892_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
WTC11_00040822	chr17	-	1929	9	NNC	ENSG00000215769.8	novel	2732	12	NA	NA	2831	-1944	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	66.4473475768597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTTTGGTTTCTACAA	NA	False	NA	NA	False	AATAAA	-18	NA	64778795	64751606	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_64751957_64754004_64754165_64754420_64754655_64758241_64758380_64758528_64758627_64761915_64762048_64762354_64762711_64764450_64764549_64778432
WTC11_00040826	chr17	-	1636	6	FSM	ENSG00000214174.9	ENST00000687667.1	1628	6	-9	1	0	0	multi-exon	FALSE	canonical	3	28	junction_5	77.5798943025833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973950	True	NA	70	True	AATAAA	-15	NA	64975576	64968037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64974950
WTC11_00040827	chr17	-	939	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	41	13	0	-1	multi-exon	FALSE	canonical	3	13	junction_4	85.9156563147835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTCTCATCTTACT	-64973950	True	NA	69	True	AATAAA	-14	NA	64975576	64968038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
WTC11_00040828	chr17	-	879	4	FSM	ENSG00000214174.9	ENST00000690613.1	921	4	32	10	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	94.0673517574863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTCTCATCTTACT	-64973950	True	NA	69	True	AATAAA	-14	NA	64975576	64968038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972317_64972663_64972753_64972928_64975559
WTC11_00040832	chr17	-	4438	12	ISM	ENSG00000198265.12	ENST00000417253.7	1872	14	18	17670	3	3022	5prime_fragment	FALSE	canonical	3	75	junction_11	14.5255545690067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTATTTTGTATCTTT	-67240314	True	NA	-3	True	AATAAA	-15	NA	67245169	67185195	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
WTC11_00040838	chr17	-	1322	3	NNC	ENSG00000186665.10	novel	2105	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	76	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-67991531	True	NA	-6	True	AATAAA	-19	NA	67993552	67991098	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67992100_67993043_67993236_67993423
WTC11_00040858	chr17	-	1363	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	-5	0	0	multi-exon	FALSE	canonical	3	8	junction_5	69.8593825719447	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-75269973	True	NA	NA	False	AATAAA	-19	NA	75271173	75266227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
WTC11_00040859	chr17	-	1438	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	-19	0	0	multi-exon	FALSE	canonical	3	36	junction_5	62.651593932016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-75270027	True	NA	NA	False	AATAAA	-19	NA	75271227	75266227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
WTC11_00040863	chr17	-	2590	8	FSM	ENSG00000108469.15	ENST00000420326.6	3710	8	0	1120	0	374	multi-exon	FALSE	canonical	0	0	junction_7	41.6952011137777	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGGGTCTGCTCCGCC	-75664702	True	NA	NA	False	GGGGCT	-44	NA	75667189	75649984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
WTC11_00040883	chr17	-	3193	2	FSM	ENSG00000141524.17	ENST00000589217.1	3192	2	0	-1	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-78111780	False	NA	2	True	AATAAA	-22	NA	78111799	78107396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78107841_78109050
WTC11_00040884	chr17	-	2665	19	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	71.7130771345001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	-78124576	True	NA	-17	True	ATTAAA	-14	NA	78128738	78112921	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
WTC11_00040891	chr17	-	9820	8	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	60.8950250975616	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-79950573	True	NA	NA	False	AATAAA	-23	NA	79950844	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79950755
WTC11_00040892	chr17	-	10906	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	43.5704046950365	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028946	True	NA	NA	False	AATAAA	-23	NA	80035860	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
WTC11_00040893	chr17	-	10783	13	NNC	ENSG00000167291.16	novel	10960	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	51.0051059535546	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028948	True	NA	NA	False	AATAAA	-23	NA	80035862	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_79940695_79940858_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
WTC11_00040894	chr17	-	10789	13	NNC	ENSG00000167291.16	novel	10960	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	45.4101677307333	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028951	True	NA	NA	False	AATAAA	-23	NA	80035865	79932342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_79940695_79940858_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
WTC11_00040902	chr17	-	3532	25	NIC	ENSG00000141577.14	novel	3630	26	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	32.2648544601294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGCCTTGAGTGACTGCC	-81220172	True	NA	-17	True	AGTAAA	-16	NA	81222965	81189598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
WTC11_00040905	chr17	-	3601	4	ISM	ENSG00000185504.17	ENST00000425898.2	2996	5	416	5	416	0	intron_retention	FALSE	canonical	1	104	junction_3	81.3674791711447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGCCTCGGCTGTTT	-81547400	False	NA	-7	True	NA	NA	NA	81548082	81539890	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745
WTC11_00040912	chr17	-	1114	5	NNC	ENSG00000214087.9	novel	1087	5	NA	NA	0	43	at_least_one_novel_splicesite	FALSE	non_canonical	1	208	junction_4	120.997933866657	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTAGAGTGGTGCTA	-81674539	True	NA	-2	True	NA	NA	NA	81683781	81681143	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683594_81683691
WTC11_00040917	chr17	-	2395	11	FSM	ENSG00000185624.16	ENST00000680400.1	2386	11	0	-9	0	2	multi-exon	FALSE	canonical	2	3	junction_10	709.790926963708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	-81860846	False	NA	0	True	AATAAA	-22	NA	81860856	81843156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860698
WTC11_00040918	chr17	-	2728	10	FSM	ENSG00000185624.16	ENST00000679366.1	2711	10	0	-17	0	0	multi-exon	FALSE	canonical	1	37	junction_5	738.43454702967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	-81827741	True	NA	-33	True	NA	NA	NA	81860524	81843189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
WTC11_00040919	chr17	-	4068	7	FSM	ENSG00000185624.16	ENST00000679628.1	4068	7	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_3	860.828428511358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCAGGCATTTCTATT	-81827738	True	NA	-74	True	NA	NA	NA	81860521	81843230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845992_81846428_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180
WTC11_00040923	chr17	-	2097	8	NIC	ENSG00000183010.17	novel	1346	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_7	523.671925650293	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925314	True	NA	-19	True	ATTAAA	-18	NA	81937236	81932390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81936969
WTC11_00040924	chr17	-	1858	8	NIC	ENSG00000183010.17	novel	1346	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	85	junction_7	507.157062175305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925363	True	NA	-19	True	ATTAAA	-18	NA	81937285	81932390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937257
WTC11_00040934	chr17	-	1873	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	-293	0	-21	0	multi-exon	FALSE	canonical	3	20	junction_1	121.170076751647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	NA	False	NA	-2	True	AATAAA	-17	NA	82273721	82239726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
WTC11_00040945	chr17	+	304	1	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTTTACTTCTTTAGG	2755008	False	NA	NA	False	NA	NA	NA	2755019	2755323	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_2755000_2755300
WTC11_00040946	chr17	+	259	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGACTCCGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6866702	6866961	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_6866700_6867000
WTC11_00040949	chr17	+	254	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGAGCG	NA	False	NA	NA	False	NA	NA	NA	29783779	29784033	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_29783800_29784000
WTC11_00040958	chr17	+	476	1	FSM	ENSG00000277491.1	ENST00000612517.1	489	1	-36	49	-36	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGCTCACCTGTTTTT	795250	False	NA	NA	False	GGGGCT	-40	NA	795269	795745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_795300_795700
WTC11_00040959	chr17	+	337	1	FSM	ENSG00000275997.1	ENST00000618967.1	210	1	15	-142	15	142	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAATAAACCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	1155980	1156317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1156000_1156300
WTC11_00040960	chr17	+	1365	1	FSM	ENSG00000205899.4	ENST00000391429.2	1372	1	-73	80	-73	-80	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCCAAGCCTGATCCG	1270348	True	NA	-78	True	NA	NA	NA	1270370	1271735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1270400_1271700
WTC11_00040961	chr17	+	660	1	FSM	ENSG00000277597.1	ENST00000615078.1	426	1	-241	7	-241	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTACGATGTCTGTTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	1684484	1685144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1684500_1685100
WTC11_00040962	chr17	+	2573	13	NIC	ENSG00000108963.19	novel	2662	13	NA	NA	-28	-473	intron_retention	FALSE	canonical	3	162	junction_5	44.1722480750075	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	NA	False	NA	18	True	AATAAA	-14	NA	2030108	2043425	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2042232_2042604
WTC11_00040963	chr17	+	535	2	FSM	ENSG00000108963.19	ENST00000575998.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCCTCCCTCTCCCAA	2039516	False	NA	NA	False	NA	NA	NA	2039552	2040481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2039824_2040217
WTC11_00040964	chr17	+	4462	24	NNC	ENSG00000141258.13	novel	4878	24	NA	NA	-468	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_23	25.9309100939145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGGAGCCTCTGGGAC	2337009	False	NA	16	True	AATAAA	-12	NA	2337029	2381050	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431_2379517_2380264
WTC11_00040966	chr17	+	711	3	NNC	ENSG00000007168.14	novel	694	4	NA	NA	-1	4422	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	254	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATATGTTCTTTGTTT	2591610	True	NA	4	True	AATAAA	-9	NA	2593955	2643070	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2594007_2638098_2638321_2642632
WTC11_00040968	chr17	+	7155	24	NNC	ENSG00000132359.15	novel	606	6	NA	NA	56972	0	intron_retention	FALSE	canonical	2	8	junction_9	42.1043352549233	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	2853442	False	NA	29	True	AATAAA	-19	NA	2853453	3037741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2985139_2985198_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
WTC11_00040970	chr17	+	219	1	FSM	ENSG00000280254.1	ENST00000623798.1	2106	1	2	1885	2	-1885	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCGCCTGCCTCGGCC	NA	False	NA	NA	False	NA	NA	NA	4787058	4787277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4787100_4787300
WTC11_00040972	chr17	+	589	6	FSM	ENSG00000129219.14	ENST00000576983.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.7224823152161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATGAATGGGGCAGAG	4814600	False	NA	NA	False	NA	NA	NA	4817145	4819515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4817260_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428
WTC11_00040973	chr17	+	1622	12	NIC	ENSG00000108515.18	novel	1448	11	NA	NA	206	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	36.0078044800162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGCTGTGTGCTTCTT	4950350	True	NA	7	True	AATAAA	-15	NA	4950395	4957127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4950631_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
WTC11_00040974	chr17	+	1425	7	NNC	ENSG00000029725.17	novel	2490	17	NA	NA	0	-11724	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	110.569736667257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCTAAGACTTACTAAGA	5277578	True	NA	NA	False	AATAAA	-20	NA	5282264	5349905	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5349486
WTC11_00040976	chr17	+	1488	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	13	junction_4	303.260284244409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419585	False	NA	26	True	AATAAA	-15	NA	5419623	5432876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
WTC11_00040978	chr17	+	2359	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	1159	-1418	525	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	6642163	False	NA	-47	True	NA	NA	NA	6642182	6644541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6642200_6644500
WTC11_00040979	chr17	+	712	4	FSM	ENSG00000262943.8	ENST00000575787.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.84754619472471	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTATATGTGTGGTGGT	NA	False	NA	NA	False	ATTAAA	-9	NA	6898909	6900345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6898930_6899390_6899491_6899592_6899707_6899867
WTC11_00040980	chr17	+	1028	3	FSM	ENSG00000108839.12	ENST00000406228.1	1023	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGAATGTTACATCACA	NA	False	NA	4	True	AATAAA	-17	NA	7009483	7010736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7009848_7009955_7010127_7010243
WTC11_00040981	chr17	+	1349	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	136	0	134	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7012702	False	NA	40	True	AATAAA	-19	NA	7012781	7014532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7013743_7014144
WTC11_00040982	chr17	+	632	4	NIC	ENSG00000258315.5	novel	764	5	NA	NA	5	4	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	336.254202782491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTCAGCTTCGTGCT	7001920	True	NA	8	True	AATAAA	-4	NA	7014786	7017510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7016494_7016686_7017256
WTC11_00040983	chr17	+	433	3	FSM	ENSG00000161940.11	ENST00000576705.1	459	3	26	0	26	0	multi-exon	FALSE	canonical	2	5	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGACCCTGGCTCGGC	7022942	False	NA	NA	False	NA	NA	NA	7023127	7024304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7023148_7023659_7023851_7024082
WTC11_00040984	chr17	+	471	2	FSM	ENSG00000161940.11	ENST00000573503.1	529	2	58	0	58	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGGCCGCCACCTATTTG	7023349	False	NA	NA	False	NA	NA	NA	7023534	7024237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7023851_7024082
WTC11_00040985	chr17	+	1373	10	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	-28	0	intron_retention	FALSE	canonical	3	705	junction_6	54.7461030802114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7222808	False	NA	15	True	AATAAA	-17	NA	7222819	7225266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
WTC11_00040986	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	437.872966024394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7252031	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
WTC11_00040988	chr17	+	3923	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	-867	-5	-867	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGAAGGCTGTTGAGGG	7351004	False	NA	12	True	AATAAA	-21	NA	7351021	7354944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7351000_7354900
WTC11_00040989	chr17	+	2283	13	NNC	ENSG00000174292.13	novel	253	3	NA	NA	-9855	-493	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.84352174302675	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCACTGGCAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	7370678	7389244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7370725_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386989_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
WTC11_00040990	chr17	+	5538	9	NNC	ENSG00000169992.10	novel	4374	8	NA	NA	-221	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.70087712549569	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	7402266	True	NA	27	True	TATAAA	-13	NA	7404652	7419860	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7404801_7405033_7405611_7408011_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
WTC11_00040991	chr17	+	4076	4	NNC	ENSG00000161958.11	novel	2578	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	6	junction_1	40.3236903073119	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7438068	False	NA	20	True	ATTAAA	-20	NA	7438250	7444937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7439768_7441470_7441582_7441775_7441880_7442593
WTC11_00040992	chr17	+	423	2	FSM	ENSG00000170175.11	ENST00000574054.1	583	2	0	160	0	-160	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGAAGGACGGACCT	7444814	False	NA	NA	False	NA	NA	NA	7445107	7445614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445186_7445269
WTC11_00040993	chr17	+	648	3	FSM	ENSG00000181222.19	ENST00000573603.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_2	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATCTCAAAAAATAAAAAA	7508456	False	NA	NA	False	NA	NA	NA	7508470	7509927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7508476_7508943_7509191_7509531
WTC11_00040994	chr17	+	1615	7	NNC	ENSG00000239697.11	novel	1625	8	NA	NA	-225	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	9.82202739877171	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTTTATTGGGGCT	7548817	False	NA	NA	False	ATTAAA	-16	NA	7548832	7557891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7549313_7549470_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
WTC11_00040995	chr17	+	1448	8	FSM	ENSG00000161960.16	ENST00000581544.5	1444	8	-4	0	0	0	multi-exon	FALSE	canonical	2	52	junction_3	4898.60093729395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGACCTCATCTGAG	7340153	True	NA	NA	False	NA	NA	NA	7572823	7578467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7578245_7578341
WTC11_00040996	chr17	+	1910	7	FSM	ENSG00000129255.16	ENST00000571822.5	1020	7	-292	-598	0	176	multi-exon	FALSE	canonical	3	19	junction_2	149.242531918128	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGGCATGGGGGCACCA	7583482	False	NA	44	True	NA	NA	NA	7583528	7588388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
WTC11_00040997	chr17	+	3888	13	ISM	ENSG00000132510.11	ENST00000448097.7	6728	24	14390	1	3692	-1	3prime_fragment	TRUE	canonical	2	7	junction_1	2.66014828325206	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTTCGCTAACGGCT	7848577	False	NA	17	True	AATAAA	-13	NA	7848606	7854795	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209_7853381_7853497
WTC11_00040998	chr17	+	7307	40	NIC	ENSG00000170004.18	novel	7361	40	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	23.0327212003024	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATACTTTCCTTTCTGTGT	7883838	True	NA	-3	True	TATAAA	-1	NA	7884822	7912740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7885084_7889663_7889777_7890570_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894126_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970_7898103_7898495_7898596_7899010_7899203_7899342_7899544_7899895_7900034_7900289_7900412_7900557_7900732_7900851_7900994_7901243_7901376_7902609_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
WTC11_00041004	chr17	+	2555	1	FSM	ENSG00000269947.1	ENST00000602597.1	674	1	-1904	23	-1904	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTTTCTGAGAAACT	8275848	False	NA	0	True	NA	NA	NA	8275858	8278413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8275900_8278400
WTC11_00041005	chr17	+	545	5	FSM	ENSG00000166579.16	ENST00000582665.5	555	5	10	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	98.6797218277393	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGAATCTTTGTTGGTC	8431523	True	NA	NA	False	NA	NA	NA	8435861	8448635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8435920_8444259_8444358_8445710_8445865_8446753_8446903_8448549
WTC11_00041006	chr17	+	243	1	FSM	ENSG00000270606.1	ENST00000605229.1	492	1	-189	438	-189	-438	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCTCCTTCGAGCTG	NA	False	NA	NA	False	NA	NA	NA	8560281	8560524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8560300_8560500
WTC11_00041007	chr17	+	3425	13	FSM	ENSG00000154914.17	ENST00000574408.5	3425	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.352133435513	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACGCATGGCTGTCTGA	NA	False	NA	3	True	AATAAA	-13	NA	9656435	9729684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_9656535_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701701_9709955_9710115_9711967_9712133_9727953
WTC11_00041009	chr17	+	2039	16	ISM	ENSG00000006740.18	ENST00000262444.13	3001	22	-289	31539	-27	0	5prime_fragment	FALSE	canonical	3	84	junction_7	10.9658054373078	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGATGAGTTTCTTT	12787736	True	NA	13	True	ATTAAA	-13	NA	12789470	12959045	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716
WTC11_00041011	chr17	+	278	2	Antisense	novelGene_ENSG00000233966.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACCCTCAGCCCCTCC	NA	False	NA	NA	False	NA	NA	NA	15602618	15704316	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_15602647_15704066
WTC11_00041013	chr17	+	4206	1	FSM	ENSG00000179277.9	ENST00000495167.3	958	1	-289	-2959	-289	2959	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATCAAAGTTATAA	15785981	False	NA	NA	False	AATAAA	-21	NA	15786328	15790534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15786300_15790500
WTC11_00041014	chr17	+	908	6	FSM	ENSG00000011295.16	ENST00000466729.5	908	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	263.53094694931	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGCAGAACAGGTAAGTACA	15995873	True	NA	NA	False	NA	NA	NA	15999783	16004251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117_16000383_16001914_16002026_16002656_16002832_16003830_16003888_16004200
WTC11_00041015	chr17	+	805	2	NNC	ENSG00000108474.17	novel	395	2	NA	NA	0	-35	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAATAAAGCTATTTTT	16214757	True	NA	-21	True	NA	NA	NA	16217236	16218184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_16217462_16217604
WTC11_00041018	chr17	+	1043	5	FSM	ENSG00000188933.16	ENST00000445583.6	1370	5	327	0	327	0	multi-exon	FALSE	canonical	2	2	junction_1	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAACATTCTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	16788085	16801126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16788136_16796042_16796235_16798241_16798531_16799950_16800372_16801035
WTC11_00041019	chr17	+	10191	18	NIC	ENSG00000133030.22	novel	3846	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_13	45.0479943982855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTGTAATGAGATTT	17136320	False	NA	22	True	AATAAA	-22	NA	17136337	17192648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
WTC11_00041020	chr17	+	4043	10	FSM	ENSG00000133030.22	ENST00000414263.5	4043	10	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	59.0017785879647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	17165535	False	NA	79	True	ATTAAA	-13	NA	17165555	17185560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17167916_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
WTC11_00041021	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	89.6178553637611	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	18084091	True	NA	NA	False	NA	NA	NA	18088006	18107600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
WTC11_00041022	chr17	+	401	4	FSM	ENSG00000091536.20	ENST00000473013.1	2243	4	570	1272	-51	554	multi-exon	FALSE	canonical	2	6	junction_1	0.942809041582063	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGCCAGGAAGACTGA	18161297	False	NA	NA	False	AATGAA	-29	NA	18161316	18163838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18161448_18162584_18162680_18163243_18163322_18163741
WTC11_00041024	chr17	+	268	2	FSM	ENSG00000214856.11	ENST00000577750.2	679	2	0	411	0	-250	multi-exon	FALSE	canonical	1	2	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCCTGAGGCTCCC	NA	False	NA	NA	False	NA	NA	NA	18442122	18442484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18442344_18442437
WTC11_00041025	chr17	+	214	1	FSM	ENSG00000230662.1	ENST00000426249.1	2665	1	2020	431	2020	-431	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCCCTATGGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	18462410	18462624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18462400_18462600
WTC11_00041026	chr17	+	1554	1	FSM	ENSG00000174977.8	ENST00000447794.1	1348	1	3	-209	3	209	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	AATAAA	-44	NA	18650197	18651751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18650200_18651800
WTC11_00041027	chr17	+	431	1	FSM	ENSG00000265478.2	ENST00000584957.2	985	1	258	296	258	-296	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGATGAACAGTCTGTC	18810194	False	NA	NA	False	GATAAA	-44	NA	18810213	18810644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18810200_18810600
WTC11_00041028	chr17	+	595	6	FSM	ENSG00000141127.15	ENST00000573253.5	584	6	-11	0	4	0	multi-exon	FALSE	canonical	3	8	junction_1	150.1444637674	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTCTCTAAATTGCT	18855842	True	NA	NA	False	AAAAAG	-5	NA	18856356	18877827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18856430_18865468_18865565_18865801_18865953_18867256_18867335_18872582_18872650_18877697
WTC11_00041029	chr17	+	1847	11	FSM	ENSG00000141127.15	ENST00000492129.5	1835	11	7	-19	4	0	multi-exon	FALSE	canonical	3	8	junction_1	138.854204113523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18855842	True	NA	35	True	AATAAA	-36	NA	18856356	18931287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18856430_18865468_18865565_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
WTC11_00041030	chr17	+	879	1	FSM	ENSG00000265185.6	ENST00000577988.2	758	1	191	-312	191	312	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGTTGAAAATGTCCA	NA	False	NA	NA	False	ACTAAA	-44	NA	19062102	19062981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19062100_19063000
WTC11_00041031	chr17	+	1279	1	FSM	ENSG00000263934.5	ENST00000584923.1	699	1	9	-589	9	589	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACTTTTAGGGCCGGG	19187922	True	NA	NA	False	NA	NA	NA	19188024	19189303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19188000_19189300
WTC11_00041034	chr17	+	566	4	FSM	ENSG00000166484.20	ENST00000579284.5	615	4	49	0	27	0	multi-exon	FALSE	canonical	1	3	junction_1	103.256961024427	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCGCTACTTCCTGTA	19378269	False	NA	NA	False	NA	NA	NA	19378308	19380680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378399_19378895_19379133_19379781_19379948_19380607
WTC11_00041036	chr17	+	332	2	FSM	ENSG00000128482.16	ENST00000574782.1	426	2	94	0	94	0	multi-exon	FALSE	canonical	2	5	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGGGGCGTGGTGGGTG	19415502	False	NA	NA	False	NA	NA	NA	19415517	19415961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19415593_19415704
WTC11_00041038	chr17	+	982	8	FSM	ENSG00000142494.13	ENST00000495425.6	1066	8	84	0	20	0	multi-exon	FALSE	canonical	2	2	junction_7	4.26662414944802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTCAGGTGTGCCCA	NA	False	NA	NA	False	NA	NA	NA	19555592	19577640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19577326
WTC11_00041040	chr17	+	1524	9	FSM	ENSG00000072210.19	ENST00000672567.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	174.901356126818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19649063	False	NA	NA	False	NA	NA	NA	19649080	19685700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19685274
WTC11_00041042	chr17	+	3661	14	FSM	ENSG00000128487.19	ENST00000681564.1	3651	14	-10	0	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	90.47939384224	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATGCTGATCTTCTTAG	NA	False	NA	NA	False	CATAAA	-12	NA	20057761	20306549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20057818_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022
WTC11_00041045	chr17	+	3538	1	FSM	ENSG00000188013.6	ENST00000418141.2	1075	1	-455	-2008	-455	2008	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTGTCTAAAAGTGG	20588707	True	NA	15	True	AATAAA	-24	NA	20588837	20592375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20588800_20592400
WTC11_00041046	chr17	+	243	1	FSM	ENSG00000235546.2	ENST00000452760.2	1342	1	264	835	264	-835	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGTCACAGCAAGT	NA	False	NA	NA	False	GGGGCT	-34	NA	20612930	20613173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20612900_20613200
WTC11_00041047	chr17	+	229	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTAGCTGCGGGGGCGC	NA	False	NA	NA	False	GGGGCT	-34	NA	20840686	20840915	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_20840700_20840900
WTC11_00041049	chr17	+	3228	3	NNC	ENSG00000233098.10	novel	3382	3	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	50.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTACTTGATCTTTGTG	20862777	True	NA	NA	False	AATAAA	-18	NA	20868530	20905228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_20868686_20892370_20892433_20902217
WTC11_00041050	chr17	+	4724	2	NNC	ENSG00000233098.10	novel	3727	4	NA	NA	-23965	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTACTTGATCTTTGTG	20897030	False	NA	NA	False	AATAAA	-18	NA	20897047	20905228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_20898761_20902217
WTC11_00041052	chr17	+	2321	1	Genic_Genomic	ENSG00000233098.10	novel	NA	NA	NA	NA	36848	1170	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTACCTCTGCCTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	20993141	20995462	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_+_20993100_20995500
WTC11_00041053	chr17	+	1088	7	NNC	ENSG00000109016.18	novel	1253	7	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	42.6653645634645	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCACAAGTGGGAAAGAC	21125239	True	NA	NA	False	NA	NA	NA	21126951	21191251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_21126992_21172017_21172197_21178232_21178343_21183593_21183811_21184370_21184464_21188710_21188856_21190947
WTC11_00041055	chr17	+	375	1	FSM	ENSG00000263563.7	ENST00000583708.6	917	1	218	324	218	-324	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAGCAGCTGGAAGATGG	NA	False	NA	NA	False	GATAAA	-39	NA	22204310	22204685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22204300_22204700
WTC11_00041056	chr17	+	1154	1	FSM	ENSG00000256618.3	ENST00000540040.3	1249	1	-34	129	-34	-129	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACATTTCTTCCAGTAC	NA	False	NA	33	True	NA	NA	NA	22523380	22524534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22523400_22524500
WTC11_00041062	chr17	+	4822	15	NIC	ENSG00000141068.15	novel	6026	21	NA	NA	1303	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	12.3835391070698	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGGGCTTGTCTTTG	27588401	False	NA	5	True	AATAAA	-13	NA	27588414	27626433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27623313
WTC11_00041063	chr17	+	6208	15	ISM	ENSG00000266728.5_ENSG00000141068.15	ENST00000398982.6	2048	17	5494	-4290	1303	0	3prime_fragment	FALSE	canonical	3	31	junction_7	9.74470028648749	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGGCTTGTCTTTGC	27588401	False	NA	6	True	AATAAA	-14	NA	27588414	27626434	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27621928
WTC11_00041065	chr17	+	559	1	FSM	ENSG00000267644.1	ENST00000587058.1	721	1	499	-337	499	337	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTAGGTGGCTGAGGC	NA	False	NA	NA	False	NA	NA	NA	28219783	28220342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28219800_28220300
WTC11_00041067	chr17	+	2872	6	FSM	ENSG00000004139.14	ENST00000585453.5	2919	6	47	0	47	0	multi-exon	FALSE	canonical	3	19	junction_1	2.22710574513201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGATGATTTCTGGCTCT	28384678	True	NA	27	True	AATACA	-17	NA	28384716	28398163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28384931_28385039_28385276_28388173_28388277_28388349_28388540_28395904_28396027_28396156
WTC11_00041068	chr17	+	325	1	FSM	ENSG00000227543.5	ENST00000584675.1	1689	1	-141	1505	-141	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCCACTTGAGTGCC	NA	False	NA	NA	False	AATACA	-21	NA	28615542	28615867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28615500_28615900
WTC11_00041069	chr17	+	3688	14	NNC	ENSG00000160602.14	novel	782	5	NA	NA	-559	0	intron_retention	FALSE	canonical	3	32	junction_4	10.6853879102679	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28728212	False	NA	12	True	AATAAA	-14	NA	28728228	28743455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28728257_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
WTC11_00041071	chr17	+	789	6	FSM	ENSG00000076604.16	ENST00000586813.5	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	130.164511292441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGCTGTAACACCGC	28737505	True	NA	NA	False	NA	NA	NA	28744035	28748603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28744256_28747217_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510
WTC11_00041073	chr17	+	252	1	FSM	ENSG00000265908.1	ENST00000579154.1	599	1	187	160	187	-160	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAACAAACAAACAACCC	NA	False	NA	NA	False	NA	NA	NA	28944982	28945234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28945000_28945200
WTC11_00041075	chr17	+	11431	14	ISM	ENSG00000160551.12	ENST00000261716.8	12643	20	90017	-5	309	5	3prime_fragment	FALSE	canonical	1	3	junction_1	5.31493374465375	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGTTTTTTTAAGCAA	29480361	True	NA	14	True	AATAAA	-22	NA	29480379	29551908	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_29480482_29482196_29482289_29489663_29489758_29491783_29491866_29495559_29495728_29498317_29498522_29502588_29502724_29507895_29508133_29510863_29510993_29517452_29517657_29522279_29522520_29530406_29530620_29534117_29534301_29542560
WTC11_00041078	chr17	+	535	6	FSM	ENSG00000198720.13	ENST00000583728.5	582	6	47	0	33	0	multi-exon	FALSE	canonical	1	1	junction_1	13.676256797823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTGGTGTACACAGAGA	29589777	True	NA	NA	False	NA	NA	NA	29589815	29609122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29589863_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609085
WTC11_00041079	chr17	+	2671	16	FSM	ENSG00000198720.13	ENST00000488766.5	2671	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	14.8458748479165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTGCTACCTAACTTT	29593454	True	NA	10	True	AATAAA	-18	NA	29593467	29614761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29593736_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609085_29609276_29609354_29609422_29610684_29610767_29611578_29611644_29611875_29612007_29612115_29612274_29612401_29612555_29612651_29612816_29612886_29612964_29613353_29613720_29614262
WTC11_00041081	chr17	+	357	2	FSM	ENSG00000108582.12	ENST00000588977.1	357	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTTCTCTAAATCCAGA	NA	False	NA	NA	False	NA	NA	NA	30445690	30451737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30446021_30451710
WTC11_00041082	chr17	+	6656	10	NNC	ENSG00000108587.16	novel	5987	9	NA	NA	-5	713	at_least_one_novel_splicesite	TRUE	canonical	1	32	junction_9	142.700930464926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAATATACCTTCCCAT	30468655	True	NA	NA	False	AATAAA	-5	NA	30477402	30528305	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253_30523523_30523571
WTC11_00041084	chr17	+	1649	7	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-473	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.8991466273873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTTTAAGAAGTTAAGTT	30599507	True	NA	NA	False	AATAAA	-21	NA	30600418	30634325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30600917_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
WTC11_00041086	chr17	+	1519	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-460	134	combination_of_known_splicesites	FALSE	canonical	3	107	junction_4	122.58319623831	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGAATATTTTGAGTGTCT	30708707	False	NA	NA	False	NA	NA	NA	30708838	30770184	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30768868_30769000_30769065_30769871
WTC11_00041087	chr17	+	1694	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	20	635	intron_retention	FALSE	canonical	3	45	junction_5	139.021437195851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCATACAATAAGTGCT	30709308	False	NA	NA	False	AATAAA	-16	NA	30709318	30777037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30769065_30769871_30769966_30776296
WTC11_00041090	chr17	+	1091	6	NIC	ENSG00000264538.7	novel	985	9	NA	NA	-21	0	intron_retention	FALSE	canonical	2	13	junction_1	134.986517845302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30729002	True	NA	17	True	AATATA	-18	NA	30731646	30770050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30732124_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
WTC11_00041093	chr17	+	266	1	FSM	ENSG00000276250.1	ENST00000621598.1	424	1	174	-16	174	16	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTTCTTTGATCTAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	30803827	30804093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30803800_30804100
WTC11_00041094	chr17	+	1216	1	FSM	ENSG00000264456.1	ENST00000580979.1	1661	1	431	14	431	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCATTCTAAGCGTTGT	30972071	False	NA	NA	False	TATAAA	-9	NA	30972082	30973298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30972100_30973300
WTC11_00041095	chr17	+	2883	4	ISM	ENSG00000181481.14	ENST00000328381.10	2054	5	12340	2	-4698	0	3prime_fragment	FALSE	canonical	3	55	junction_2	15.7691682300198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGAGTTCTGTGA	NA	False	NA	19	True	AATAAA	-19	NA	30983378	30999909	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_30984761_30987943_30988107_30997241_30997332_30998661
WTC11_00041096	chr17	+	837	7	NNC	ENSG00000266865.7	novel	527	7	NA	NA	-7405	262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	462.569063912503	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACAGTGCAACAAGCTAG	31016924	False	NA	NA	False	NA	NA	NA	31016935	31034553	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_31017004_31021048_31021163_31021909_31022043_31024376_31024427_31031559_31031683_31032425_31032507_31034285
WTC11_00041101	chr17	+	3165	20	NNC	ENSG00000126858.19	novel	3165	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	70.6900691227288	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139624	True	NA	10	True	AATAAA	-20	NA	32142454	32225727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_32142730_32152828_32152905_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
WTC11_00041102	chr17	+	2732	18	NIC	ENSG00000126858.19	novel	2771	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	57.9766090525466	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCCCAAGTGTAAATC	32139673	True	NA	25	True	AATAAA	-24	NA	32142503	32225503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32206909_32207030_32208106_32208310_32224615
WTC11_00041103	chr17	+	1209	1	FSM	ENSG00000280033.1	ENST00000623319.1	1061	1	-92	-56	-92	56	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGAATGGTGGGGCTAA	NA	False	NA	60	True	NA	NA	NA	32159218	32160427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32159200_32160400
WTC11_00041105	chr17	+	4439	6	NNC	ENSG00000265794.5	novel	514	5	NA	NA	-35976	-36006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.1311215560276	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGGTTATTCAGGAAG	NA	False	NA	11	True	ATTAAA	-21	NA	32288454	32324659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_32288647_32288791_32289017_32294344_32294443_32298091_32298213_32305340_32305442_32320957
WTC11_00041107	chr17	+	559	5	FSM	ENSG00000108671.11	ENST00000584340.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	970.692375317742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCAATCATCAGCACAC	32468987	True	NA	NA	False	NA	NA	NA	32469071	32479282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32469194_32473800_32474082_32474763_32474825_32477520_32477584_32479250
WTC11_00041109	chr17	+	664	2	FSM	ENSG00000176749.9	ENST00000584792.5	664	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTCTAGCAAAGCCA	32487524	False	NA	NA	False	ATTAAA	-16	NA	32487795	32488619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32488087_32488246
WTC11_00041110	chr17	+	962	3	FSM	ENSG00000176749.9	ENST00000584716.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCCCCACCCGTTAAT	32487524	False	NA	NA	False	NA	NA	NA	32487795	32489520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32488087_32488246_32488541_32489143
WTC11_00041111	chr17	+	1358	4	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	1964	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9652400197707	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34157549	False	NA	NA	False	NA	NA	NA	34157577	34162199	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_34157838_34157870_34158121_34159042_34159116_34161424
WTC11_00041112	chr17	+	332	1	FSM	ENSG00000273687.1	ENST00000612426.1	332	1	14	-14	14	14	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTATTGTATATACTT	NA	False	NA	NA	False	AATAAA	-28	NA	35018673	35019005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35018700_35019000
WTC11_00041113	chr17	+	1330	4	FSM	ENSG00000267364.3	ENST00000664469.1	1343	4	5	8	-1	-8	multi-exon	FALSE	canonical	2	9	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAACTTCTGGGTTAT	35313313	True	NA	NA	False	AATATA	-23	NA	35313490	35325440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35313707_35321734_35321866_35323147_35323344_35324653
WTC11_00041114	chr17	+	903	3	NIC	ENSG00000270885.2	novel	3215	4	NA	NA	59	62	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	78.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAACCATACTGTTCT	35729830	True	NA	NA	False	AAGAAA	-41	NA	35731697	35737134	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35731879_35735037_35735401_35736775
WTC11_00041115	chr17	+	903	2	ISM	ENSG00000270806.2	ENST00000605587.2	1041	3	3190	0	3168	0	3prime_fragment	TRUE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTGAGGTGGCGCAGG	35764051	True	NA	NA	False	AATAAA	-20	NA	35764076	35765079	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_35764326_35764425
WTC11_00041116	chr17	+	2162	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	-22	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_4	19.2208220427743	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	35791470	True	NA	36	True	AATAAA	-20	NA	35809466	35847234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
WTC11_00041117	chr17	+	766	2	Antisense	novelGene_ENSG00000270871.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGACAGAGCGAGACT	35828624	False	NA	NA	False	NA	NA	NA	35828813	35829604	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_35829042_35829066
WTC11_00041118	chr17	+	726	7	NNC	ENSG00000261499.2	novel	1168	11	NA	NA	23117	-5268	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_4	64.3758495089579	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATGGTTTGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	36297307	36315279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36297387_36307296_36307419_36310674_36310783_36313436_36313638_36314083_36314181_36314308_36314343_36315194
WTC11_00041119	chr17	+	1244	5	NNC	ENSG00000278619.5	novel	1839	5	NA	NA	25	18443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.1382552094198	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTCGCCTCTCATT	36601585	False	NA	NA	False	AATAAA	-18	NA	36601607	36627407	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36627255
WTC11_00041120	chr17	+	1435	1	FSM	ENSG00000275720.1	ENST00000618067.1	630	1	-812	7	-812	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATTACTGTTGTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	36633256	36634691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36633300_36634700
WTC11_00041123	chr17	+	576	5	FSM	ENSG00000276234.5	ENST00000610834.4	689	5	1	112	1	6	multi-exon	FALSE	canonical	3	41	junction_1	13.235841491949	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGTCCCCTCTGTACAT	37404878	True	NA	NA	False	NA	NA	NA	37406886	37437961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737
WTC11_00041124	chr17	+	1559	3	FSM	ENSG00000276023.5	ENST00000613659.1	1559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAACATATTAGAATTT	37491413	False	NA	NA	False	AATAAA	-7	NA	37491463	37513487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37491628_37510676_37510765_37512180
WTC11_00041125	chr17	+	667	7	ISM	ENSG00000274419.6	ENST00000616101.4	2116	14	4679	1860	4679	-1860	internal_fragment	TRUE	canonical	3	5	junction_5	9.4457515435365	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACCTGCCACCCCCAGG	NA	False	NA	NA	False	AAGAAA	-16	NA	38008654	38013042	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38008757_38010004_38010054_38010596_38010718_38011430_38011526_38011909_38011976_38012438_38012539_38012908
WTC11_00041126	chr17	+	1555	8	NNC	ENSG00000274615.1	novel	1300	11	NA	NA	33173	-5	intron_retention	FALSE	canonical	3	69	junction_3	84.2779657455262	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTCAGGTTGAATAT	NA	False	NA	NA	False	AATAAA	-20	NA	38111434	38124765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_38111523_38114778_38114887_38117539_38118284_38118407_38118442_38119292_38119408_38122799_38122965_38124038_38124144_38124569
WTC11_00041130	chr17	+	799	6	FSM	ENSG00000275023.5	ENST00000615858.1	1208	6	0	409	0	-409	multi-exon	FALSE	canonical	2	6	junction_2	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCGCTACGAGGAGTGG	38717402	False	NA	NA	False	NA	NA	NA	38717423	38720747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38717614_38717844_38717954_38719516_38719584_38719749_38719896_38720371_38720570_38720658
WTC11_00041131	chr17	+	2998	1	FSM	ENSG00000277182.1	ENST00000610658.1	2098	1	-832	-68	-832	68	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGTGTCTTTAGGTT	NA	False	NA	NA	False	NA	NA	NA	38748527	38751525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38748500_38751500
WTC11_00041132	chr17	+	548	2	FSM	ENSG00000277791.5	ENST00000618159.1	562	2	14	0	14	0	multi-exon	FALSE	canonical	3	2579	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38762010	False	NA	27	True	AATAAA	-16	NA	38762064	38764225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38762506_38764118
WTC11_00041135	chr17	+	2771	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-10	-1	combination_of_known_junctions	TRUE	canonical	3	54	junction_4	99.1886730284404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGTGCTCAGTAATCAA	39631936	True	NA	11	True	ATTAAA	-17	NA	39637128	39664200	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
WTC11_00041142	chr17	+	714	5	FSM	ENSG00000108349.17	ENST00000577605.1	714	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	221.42775345471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTCCATGTCTCC	40163901	False	NA	NA	False	NA	NA	NA	40163911	40168255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40164167_40166796_40166862_40167370_40167613_40167849_40167949_40168202
WTC11_00041144	chr17	+	262	1	FSM	ENSG00000278954.1	ENST00000622936.1	2466	1	1843	361	1843	-361	mono-exon	FALSE	NA	NA	NA	NA	NA	3804	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTAGGCCACGCGGC	NA	False	NA	NA	False	NA	NA	NA	41667408	41667670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41667400_41667700
WTC11_00041145	chr17	+	1438	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	-10	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	386.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	41632428	True	NA	-2	True	TTTAAA	-10	NA	41688884	41691622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689070_41689777_41690190_41690781
WTC11_00041147	chr17	+	876	1	FSM	ENSG00000260325.2	ENST00000565659.2	549	1	8	-335	8	335	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	42122801	False	NA	NA	False	NA	NA	NA	42122811	42123687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42122800_42123700
WTC11_00041149	chr17	+	3801	19	FSM	ENSG00000126561.18	ENST00000677893.1	3801	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	36.6961581734568	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTTTTTCATAAA	42288429	True	NA	NA	False	NA	NA	NA	42288440	42311923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42288599_42289401_42289540_42289865_42290023_42291971_42292062_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304647_42305609_42305703_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
WTC11_00041152	chr17	+	514	1	FSM	ENSG00000267632.1	ENST00000591237.1	1736	1	12	1210	12	-1210	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTTCAAAGACCTCCCA	NA	False	NA	NA	False	AATATA	-5	NA	42509795	42510309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42509800_42510300
WTC11_00041153	chr17	+	253	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTCTTTTTAATGT	NA	False	NA	NA	False	AATAAA	-39	NA	42533171	42533424	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_42533200_42533400
WTC11_00041154	chr17	+	719	2	ISM	ENSG00000108786.11	ENST00000225929.5	1265	6	1476	-1	1476	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGGCACCATTCCTT	42554278	True	NA	17	True	AATAAA	-17	NA	42554409	42555214	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_42554583_42554668
WTC11_00041155	chr17	+	2491	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	12	34	10	2	multi-exon	FALSE	canonical	0	0	junction_1	216.973178065861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCACTGCCTGTCAGT	42562583	True	NA	12	True	AATAAA	-25	NA	42567083	42573205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
WTC11_00041156	chr17	+	1392	7	NIC	ENSG00000108788.12	novel	2360	8	NA	NA	-1	-435	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	170.737615461073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGATGCTGCATGGCAGA	42562597	True	NA	NA	False	NA	NA	NA	42567097	42572270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42567167_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
WTC11_00041158	chr17	+	1776	11	NNC	ENSG00000037042.9	novel	1782	11	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	157.989113549004	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656157	True	NA	14	True	AATAAA	-26	NA	42659243	42667006	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663422_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
WTC11_00041159	chr17	+	1742	10	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	155.23920212544	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656157	True	NA	14	True	AATAAA	-26	NA	42659243	42667006	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
WTC11_00041160	chr17	+	2437	11	NNC	ENSG00000037042.9	novel	1782	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	164.76653179575	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656218	True	NA	14	True	AATAAA	-26	NA	42659304	42667006	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42661200_42661957_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
WTC11_00041161	chr17	+	1943	3	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	-74	2	15	-2	intron_retention	FALSE	canonical	3	11	junction_2	8.5	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCTGGGTTTTGTGA	43124696	True	NA	11	True	AATAAA	-20	NA	43125565	43140331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_43125771_43131207_43131271_43138656
WTC11_00041163	chr17	+	1103	2	NIC	ENSG00000125319.15	novel	2272	7	NA	NA	760	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44147104	False	NA	4	True	AATAAA	-14	NA	44148530	44162476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44149028_44161870
WTC11_00041164	chr17	+	1919	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	2	0	2	0	multi-exon	FALSE	canonical	2	13	junction_1	47	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	44186742	True	NA	13	True	AATAAA	-21	NA	44186987	44191730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187110_44189021_44189589_44190500
WTC11_00041166	chr17	+	2194	4	NIC	ENSG00000168591.16	novel	2418	3	NA	NA	12	2	intron_retention	FALSE	canonical	1	15	junction_3	40.8357142163028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTGTGACAGAGAAT	44185801	True	NA	16	True	AATAAA	-24	NA	44187217	44191733	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44188934_44189589_44190500_44190887_44191105
WTC11_00041167	chr17	+	2009	4	NIC	ENSG00000168591.16	novel	2151	4	NA	NA	-13	0	intron_retention	FALSE	canonical	3	10	junction_3	19.3620476419435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185804	True	NA	9	True	AATAAA	-17	NA	44187220	44191726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44188934_44189092_44190500
WTC11_00041168	chr17	+	1642	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	19	0	intron_retention	FALSE	canonical	3	9	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185877	False	NA	9	True	AATAAA	-17	NA	44187293	44191726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187432_44189021_44189300_44190500
WTC11_00041170	chr17	+	477	1	FSM	ENSG00000260793.3	ENST00000563394.1	1796	1	-220	1539	-220	-643	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGTCACACCCGGACCAG	44221682	False	NA	NA	False	NA	NA	NA	44221694	44222171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44221700_44222200
WTC11_00041173	chr17	+	4994	12	NNC	ENSG00000161692.18	novel	2998	12	NA	NA	2	5	intron_retention	FALSE	canonical	3	18	junction_8	15.7075546386849	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTCTTTCCCTAT	44705761	True	NA	8	True	AATAAA	-21	NA	44708666	44752269	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
WTC11_00041174	chr17	+	603	4	FSM	ENSG00000161692.18	ENST00000531699.5	624	4	21	0	5	0	multi-exon	FALSE	canonical	2	3	junction_1	25.5081686262787	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTGGAGGCTCAGACAA	44708544	True	NA	NA	False	NA	NA	NA	44708866	44731160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44708939_44722879_44723023_44729904_44730097_44730964
WTC11_00041175	chr17	+	3307	8	ISM	ENSG00000073670.14	ENST00000200557.11	4614	27	17785	0	1215	0	intron_retention	FALSE	canonical	3	9	junction_6	3.15581743348207	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCGTTTCTCTCCTGTC	44776719	False	NA	21	True	ATTAAA	-37	NA	44776772	44781846	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_44776796_44776898_44776963_44777165_44777266_44777481_44777602_44777694_44777864_44777951_44778067_44778151_44778243_44779221
WTC11_00041176	chr17	+	505	3	FSM	ENSG00000131097.7	ENST00000253410.3	650	3	144	1	86	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACAGACTCTTTTTCAC	NA	False	NA	NA	False	AATAAA	-16	NA	44848026	44850475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44848253_44849253_44849389_44850331
WTC11_00041179	chr17	+	778	5	FSM	ENSG00000184922.15	ENST00000585852.5	877	5	0	99	0	-99	multi-exon	FALSE	canonical	1	3	junction_2	2.1650635094611	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGATGGAGGTTGCAGTG	45230656	False	NA	NA	False	NA	NA	NA	45230668	45234588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45230688_45232366_45232451_45233223_45233298_45233647_45233732_45234071
WTC11_00041180	chr17	+	454	4	FSM	ENSG00000267278.6	ENST00000591263.5	454	4	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	8.05536398239638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGACAGAGGTAAGGGTT	45247464	True	NA	NA	False	GGGGCT	-9	NA	45247924	45267490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45267415
WTC11_00041183	chr17	+	463	1	FSM	ENSG00000204652.6	ENST00000393490.3	348	1	-28	-87	-28	87	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGACCGCACTATGTTG	NA	False	NA	NA	False	AATAAA	-36	NA	45608542	45609005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45608500_45609000
WTC11_00041184	chr17	+	530	4	NNC	ENSG00000204650.14	novel	546	4	NA	NA	5	-1669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.4681016122491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGGTGTGTGTGTG	45614530	True	NA	NA	False	ATTAAA	-13	NA	45620350	45634675	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_45620373_45621907_45622042_45629903_45630159_45634556
WTC11_00041187	chr17	+	671	1	FSM	ENSG00000204650.14	ENST00000580655.1	1942	1	1223	48	1223	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCTAGTACTGCTGTG	NA	False	NA	-43	True	AATACA	-6	NA	45641584	45642255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45641600_45642300
WTC11_00041188	chr17	+	2505	12	FSM	ENSG00000120088.15	ENST00000339069.9	2490	12	-17	2	-17	0	multi-exon	FALSE	canonical	1	1	junction_3	5.01567789968499	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTGAAGGCCTGGAC	NA	False	NA	6	True	TATAAA	-22	NA	45784262	45835825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45784578_45807009_45807098_45816462_45816583_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
WTC11_00041189	chr17	+	621	1	FSM	ENSG00000265411.1	ENST00000579044.1	281	1	-196	-144	-196	144	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCTTGATCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	46319482	46320103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46319500_46320100
WTC11_00041190	chr17	+	2069	15	Fusion	ENSG00000238083.8_ENSG00000260075.1	novel	1471	13	NA	NA	-69	25606	multi-exon	TRUE	canonical	1	5	junction_14	103.124874768013	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCCCGGCTGCGTTTCT	NA	False	NA	NA	False	NA	NA	NA	46372785	46512747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_46372867_46406663_46406750_46409033_46409134_46412830_46412871_46419797_46419965_46422476_46422585_46423065_46423142_46425526_46425683_46456706_46456907_46475199_46475366_46476143_46476219_46476771_46476960_46487044_46487141_46511510_46511609_46512315
WTC11_00041191	chr17	+	2648	20	FSM	ENSG00000073969.18	ENST00000575068.5	2667	20	19	0	19	0	multi-exon	FALSE	canonical	3	204	junction_14	33.0664570481546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAAGTGATTCCTTCT	NA	False	NA	73	True	NA	NA	NA	46624054	46756059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
WTC11_00041195	chr17	+	5340	4	NNC	ENSG00000178852.16	novel	558	3	NA	NA	10937	7373	intron_retention	FALSE	canonical	0	0	junction_1	15.121728296285	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAATTAGTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	47340787	47349400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_47341500_47341920_47342033_47344161_47344293_47345015
WTC11_00041196	chr17	+	4252	22	FSM	ENSG00000141279.17	ENST00000678461.1	4252	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	106.866840235641	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTCCTGATTCACTT	NA	False	NA	19	True	AATAAA	-15	NA	47531107	47623271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585746_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
WTC11_00041197	chr17	+	559	4	FSM	ENSG00000141279.17	ENST00000533573.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	251.884894346604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATTTAAAACCGAGTAA	47529465	True	NA	NA	False	NA	NA	NA	47531215	47577136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47577080
WTC11_00041198	chr17	+	1142	9	FSM	ENSG00000141279.17	ENST00000528751.6	1344	9	-10	212	0	-212	multi-exon	FALSE	canonical	1	3	junction_7	163.173172963573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATATTTTTAAGTG	47529508	False	NA	NA	False	NA	NA	NA	47531258	47587344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586250_47586364_47586399_47587229
WTC11_00041204	chr17	+	2989	5	NIC	ENSG00000082641.16	novel	4390	6	NA	NA	0	-11	intron_retention	FALSE	canonical	3	27	junction_2	75.5227614696391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGTGGAGTGGAAGTGGC	48039499	True	NA	NA	False	NA	NA	NA	48048362	48059822	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48048463_48050606_48051629_48056418_48056599_48057343_48057503_48058294
WTC11_00041207	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2033.34224041765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	48880702	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
WTC11_00041214	chr17	+	3277	10	FSM	ENSG00000015532.10	ENST00000376550.7	3267	10	-10	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	29.0661229986532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	50341509	True	NA	8	True	AATATA	-15	NA	50346125	50361151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50358206_50358541_50359968
WTC11_00041219	chr17	+	545	2	FSM	ENSG00000167107.13	ENST00000503295.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGAGGACTTCTTTCACA	NA	False	NA	NA	False	NA	NA	NA	50472130	50473760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50472580_50473664
WTC11_00041223	chr17	+	2615	17	NNC	ENSG00000006282.21	novel	2634	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	28.9025842270203	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	50545249	True	NA	16	True	AATAAA	-22	NA	50547186	50555852	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_50547286_50547719_50547768_50548288_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
WTC11_00041226	chr17	+	986	8	NIC	ENSG00000108848.16	novel	1112	9	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	282.031840726669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCAAAATTAAAGCTAC	50704624	True	NA	-14	True	AAAACA	-11	NA	50719596	50744777	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
WTC11_00041227	chr17	+	2032	13	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	258.765485312259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACTTAGCCTTTGGATT	50704624	True	NA	-39	True	NA	NA	NA	50719596	50752584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50749218_50749345_50750500_50750642_50750746_50750853_50752199
WTC11_00041229	chr17	+	2093	13	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_11	249.59315506551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACTAGTCCCCTGTTT	50704624	True	NA	7	True	AATAAA	-10	NA	50719596	50752705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
WTC11_00041232	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	3157.69411269917	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	51104167	True	NA	23	True	AATAAA	-15	NA	51153635	51171742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
WTC11_00041233	chr17	+	810	5	NNC	ENSG00000243678.12	novel	690	5	NA	NA	-123	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2934.46744529565	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	51166166	False	NA	23	True	AATAAA	-15	NA	51166287	51171742	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_51166498_51166826_51166957_51168241_51168343_51169936_51170050_51171486
WTC11_00041237	chr17	+	952	8	ISM	ENSG00000141198.16	ENST00000576932.5	1252	11	0	10034	0	-39	5prime_fragment	FALSE	canonical	3	44	junction_1	144.642839506172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCCTTAATTACGTG	54896637	True	NA	20	True	AATAAA	-43	NA	54900833	54937277	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
WTC11_00041238	chr17	+	2182	16	NIC	ENSG00000141198.16	novel	2168	16	NA	NA	0	-25	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	118.848811521193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGATGACAAATAAATCA	54896637	True	NA	NA	False	AATGAA	-22	NA	54900833	54961924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_54900924_54903679_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
WTC11_00041239	chr17	+	2537	16	NNC	ENSG00000141198.16	novel	2168	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	125.231447949609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	54896637	True	NA	NA	False	AATAAA	-16	NA	54900833	54961956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937578_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
WTC11_00041249	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	59220074	False	NA	NA	False	NA	NA	NA	59220681	59249228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
WTC11_00041251	chr17	+	4785	2	FSM	ENSG00000141367.12	ENST00000498711.1	2941	2	0	-1844	0	0	multi-exon	FALSE	canonical	3	1526	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	59689138	False	NA	NA	False	TATAAA	-3	NA	59689155	59696956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59690712_59693727
WTC11_00041260	chr17	+	3821	14	FSM	ENSG00000173826.15	ENST00000583023.1	3821	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	4.79644839019074	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	63523132	False	NA	4	True	AATAAA	-20	NA	63523402	63546727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544011_63544120_63544248_63544412_63545077_63545265_63545608
WTC11_00041264	chr17	+	332	1	FSM	ENSG00000199753.1	ENST00000362883.1	70	1	-105	-157	-105	157	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCGGTGTGTGTC	64141726	True	NA	28	True	AATAAA	-16	NA	64145977	64146309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_64146000_64146300
WTC11_00041271	chr17	+	9651	30	NIC	ENSG00000171634.19	novel	11292	30	NA	NA	21	585	combination_of_known_junctions	FALSE	canonical	2	18	junction_4	80.6472626629678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGGTGTCTTTGAATGT	67823930	True	NA	10	True	AATAAA	-24	NA	67826053	67983154	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
WTC11_00041272	chr17	+	11405	31	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	77.5849355366248	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	67823988	True	NA	10	True	AATAAA	-21	NA	67826111	67984378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
WTC11_00041279	chr17	+	1954	5	NIC	ENSG00000141219.16	novel	2075	6	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	65.6467820993535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGATACAGGAAGTAAAC	73229498	True	NA	NA	False	AATAAA	-25	NA	73232673	73245343	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73245167
WTC11_00041281	chr17	+	894	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	-162	-339	-162	0	multi-exon	FALSE	canonical	0	0	junction_1	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTGCTCTGGGATTGT	74442904	True	NA	11	True	AATAAA	-18	NA	74442914	74447427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74443135_74443817_74443913_74446848
WTC11_00041283	chr17	+	555	6	FSM	ENSG00000172794.20	ENST00000533530.5	578	6	23	0	10	0	multi-exon	FALSE	canonical	3	26	junction_2	3.44093010681705	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAAAAGGACTCTGCA	74736859	True	NA	NA	False	NA	NA	NA	74737241	74744465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307
WTC11_00041290	chr17	+	4952	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	39.2628485965646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATACCTGTGGCTGGT	75455608	True	NA	NA	False	ATTAAA	-15	NA	75456653	75500082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491468_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494709_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
WTC11_00041296	chr17	+	1352	10	NIC	ENSG00000073350.14	novel	3527	22	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	152.57938633971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGCACGTACCTGTA	75525066	False	NA	11	True	AATAAA	-14	NA	75525104	75564723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75525175_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
WTC11_00041298	chr17	+	1393	11	FSM	ENSG00000073350.14	ENST00000578363.5	1393	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	189.485118149157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGCACGTACCTGTA	75523686	True	NA	11	True	AATAAA	-14	NA	75525778	75564723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75533641_75533706_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
WTC11_00041305	chr17	+	1986	16	NIC	ENSG00000266714.10	novel	9914	64	NA	NA	-38	-9	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	3.8815804341359	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAAAAGGGCTGTGTGC	75620283	False	NA	-2	True	AATAAA	-7	NA	75620293	75626840	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75620358_75621030_75621177_75621344_75621409_75621500_75621571_75622003_75622081_75623780_75623855_75623948_75624065_75624174_75624270_75624369_75624448_75624542_75624640_75624770_75624917_75625122_75625239_75625526_75625661_75625843_75625978_75626087_75626229_75626406
WTC11_00041308	chr17	+	2411	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	-5	3	0	0	multi-exon	FALSE	canonical	3	58	junction_6	214.504827422728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	75655909	True	NA	23	True	TATAAA	-18	NA	75667365	75708059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
WTC11_00041309	chr17	+	1255	7	ISM	ENSG00000132470.14	ENST00000450894.7	5645	39	33238	-3	117	0	3prime_fragment	FALSE	canonical	3	18	junction_6	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGCCTTGCCCATTCT	75754690	False	NA	11	True	AATAAA	-18	NA	75754734	75757818	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
WTC11_00041315	chr17	+	1476	5	NNC	ENSG00000181038.14	novel	1184	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	88.6943487489479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724415	True	NA	NA	False	ATTAAA	-17	NA	76726850	76733880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_76727535_76729689_76729795_76732977_76733216_76733292_76733382_76733520
WTC11_00041317	chr17	+	2693	14	NIC	ENSG00000092931.12	novel	2538	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.6571200043116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGATTTTGAAAAGATGT	76737101	True	NA	NA	False	AATAAA	-22	NA	76737693	76779341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76737977_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
WTC11_00041322	chr17	+	2680	17	NIC	ENSG00000129657.16	novel	5500	17	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	46.6514670187337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGATATTGATGCAAAA	77135972	True	NA	0	True	ATTAAA	-13	NA	77141008	77214325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_77141108_77142649_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
WTC11_00041323	chr17	+	5050	18	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_17	43.8030350815208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135995	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215897_77216283
WTC11_00041324	chr17	+	4998	19	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_17	57.2313099579782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135995	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215806_77215857_77215897_77216283
WTC11_00041326	chr17	+	772	5	FSM	ENSG00000184640.20	ENST00000586128.5	752	5	-20	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_1	292.337561733008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACCACATCAACAACGAGA	77450170	True	NA	NA	False	NA	NA	NA	77450555	77488297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77450787_77451366_77451529_77482143_77482336_77487423_77487553_77488239
WTC11_00041334	chr17	+	1939	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	1	-25	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	106.058872212559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATATAATTATACATCTG	78372229	True	NA	-22	True	NA	NA	NA	78378697	78424529	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78403567_78404090_78414878_78415028_78419545_78419676_78424060
WTC11_00041342	chr17	+	2938	18	NIC	ENSG00000181045.15	novel	2888	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	28.5680151198727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAATGTCTGCGTGG	80218768	True	NA	45	True	AATAAA	-17	NA	80220448	80253500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80220497_80220915_80221116_80221547_80221795_80222654_80222848_80223179_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
WTC11_00041348	chr17	+	1010	9	NIC	ENSG00000173818.17	novel	1226	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	15.169356446468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414458	True	NA	34	True	AATAGA	-24	NA	80415190	80430343	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
WTC11_00041362	chr17	+	613	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	-10	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	280.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	81871594	True	NA	29	True	ATTAAA	-13	NA	81891712	81900253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81894466_81894625_81899919
WTC11_00041363	chr17	+	1213	2	FSM	ENSG00000141552.18	ENST00000575195.2	1361	2	148	0	-20	0	multi-exon	FALSE	canonical	3	4236	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCACGTGATCACAAGG	81894159	False	NA	NA	False	NA	NA	NA	81894445	81900991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81894587_81899919
WTC11_00041376	chr17	-	6446	21	NIC	ENSG00000141252.21	novel	13089	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_17	10.3221848462426	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACTCTGCTCTTACTG	-709746	False	NA	-20	True	AATAAA	-28	NA	714674	515058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_519299_519825_519931_521600_521739_532841_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
WTC11_00041385	chr17	-	1585	6	NNC	ENSG00000108953.17	novel	2052	6	NA	NA	0	89606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5930.92604573687	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATTAAATGGGATTAGC	-1361535	True	NA	NA	False	AAAAAG	-6	NA	1400135	1254668	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1254703_1344551_1345500_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00041386	chr17	-	1667	7	NNC	ENSG00000108953.17	novel	1818	7	NA	NA	0	89606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6087.93449966589	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATTAAATGGGATTAGC	-1361581	True	NA	NA	False	AAAAAG	-6	NA	1400181	1254668	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1254702_1342822_1342847_1344538_1345500_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00041387	chr17	-	1585	6	NNC	ENSG00000108953.17	novel	2052	6	NA	NA	0	46682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5930.92604573687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTGGCTAAAATAACAAG	-1361535	True	NA	NA	False	NA	NA	NA	1400135	1297592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1297619_1344543_1345500_1361091_1361299_1361901_1362009_1364858_1365059_1400046
WTC11_00041389	chr17	-	1877	11	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	688	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	190.447604343032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTTTGTGATGTGGT	-1557754	False	NA	NA	False	NA	NA	NA	1561942	1520212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1561198
WTC11_00041390	chr17	-	1242	11	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	191.256398585773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTTTGTGATGTGGT	-1558576	True	NA	NA	False	NA	NA	NA	1562764	1520212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1562655
WTC11_00041391	chr17	-	1356	10	FSM	ENSG00000167703.15	ENST00000574743.5	2030	10	0	674	0	-674	multi-exon	FALSE	canonical	3	40	junction_9	15.8706188666314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTAGGCAGGGCCGGTG	-1628133	True	NA	NA	False	NA	NA	NA	1628886	1585912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
WTC11_00041393	chr17	-	5934	10	NIC	ENSG00000186532.12	novel	4405	11	NA	NA	12	-54	intron_retention	FALSE	canonical	3	89	junction_8	10.9657153702003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTCCTTCTGAGTT	-1828129	True	NA	-16	True	AATAAA	-30	NA	1829890	1779538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
WTC11_00041394	chr17	-	6230	20	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	20.7157252887324	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	-2303862	False	NA	-4	True	AATAAA	-20	NA	2303898	2059842	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303013_2303157_2303632
WTC11_00041395	chr17	-	4254	16	NNC	ENSG00000167721.11	novel	4245	15	NA	NA	0	2144	intron_retention	FALSE	non_canonical	0	0	junction_1	167.544806610716	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGAGATGAGGTCAGAA	-2321765	True	NA	NA	False	NA	NA	NA	2336443	2320251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2320277_2322397_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
WTC11_00041398	chr17	-	3197	12	ISM	ENSG00000196689.13	ENST00000399756.8	4068	15	2529	-304	2002	-31	3prime_fragment	FALSE	canonical	3	9	junction_11	3.24228263638673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATACTGGCATCCTCA	NA	False	NA	-44	True	NA	NA	NA	3590348	3565489	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_3566988_3571523_3571640_3572121_3572250_3573632_3573956_3577125_3577193_3577597_3577764_3580456_3580528_3583337_3583431_3585767_3585927_3588187_3588368_3589806_3590106_3590251
WTC11_00041399	chr17	-	367	3	FSM	ENSG00000196689.13	ENST00000570742.1	492	3	125	0	125	0	multi-exon	FALSE	canonical	3	13	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTTCACCATCGGCAT	NA	False	NA	NA	False	NA	NA	NA	3577763	3573821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3573956_3577125_3577193_3577597
WTC11_00041401	chr17	-	2260	14	NIC	ENSG00000074356.17	novel	12772	13	NA	NA	12	344	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	46.3661782467253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTGTCGTCTTTTGTG	-3838708	True	NA	13	True	NA	NA	NA	3846234	3812195	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3812655_3813116_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
WTC11_00041405	chr17	-	9022	42	NIC	ENSG00000074755.15	novel	11466	55	NA	NA	-12285	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_41	6.60169610279589	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCCTGTGTGTGGACTGG	NA	False	NA	NA	False	AATATA	-25	NA	4087465	4004446	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4006971_4008882_4008955_4009603_4009758_4013448_4013615_4014089_4014189_4014346_4014516_4016322_4016467_4017370_4017731_4017835_4017972_4019668_4019770_4021128_4021321_4022708_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752_4062918_4064360_4064830_4066446_4066541_4067162_4067243_4070683_4070925_4072607_4072757_4074149_4074352_4075096_4075179_4075262_4075430_4076636_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436_4082508_4085669_4085804_4086485_4086656_4087433
WTC11_00041406	chr17	-	6162	26	FSM	ENSG00000185722.18	ENST00000648043.1	6162	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.2258515701425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCATTTTCTGTAACAA	-4258763	True	NA	-62	True	NA	NA	NA	4263995	4163956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4164174_4165397_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182350_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
WTC11_00041409	chr17	-	445	3	FSM	ENSG00000141456.16	ENST00000575534.1	601	3	156	0	156	0	multi-exon	FALSE	canonical	3	782	junction_2	42.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCCCTGATGGGAGT	-4675346	False	NA	NA	False	NA	NA	NA	4675362	4674656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4674670_4674808_4674957_4675078
WTC11_00041410	chr17	-	685	3	FSM	ENSG00000182853.12	ENST00000416307.6	712	3	0	27	0	-27	multi-exon	FALSE	canonical	1	2	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTATTAAAGCTTCTCT	-4786292	False	NA	-26	True	NA	NA	NA	4786398	4785311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4785660_4785956_4786053_4786157
WTC11_00041411	chr17	-	887	5	NNC	ENSG00000108518.8	novel	807	3	NA	NA	93	20418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15470.0614312775	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGAAGATGCCGGGCGT	-4948933	False	NA	NA	False	AAAAAG	-6	NA	4948968	4925233	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925267_4945654_4945998_4946627_4946821_4948262_4948556_4948943
WTC11_00041412	chr17	-	703	3	FSM	ENSG00000108509.21	ENST00000574442.1	764	3	61	0	61	0	multi-exon	FALSE	canonical	3	59	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCTCGGTTCCCACCAC	-4969342	False	NA	NA	False	NA	NA	NA	4969354	4968396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906_4968982_4969149
WTC11_00041415	chr17	-	2294	5	FSM	ENSG00000132517.15	ENST00000254853.10	2375	5	12	69	8	45	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAATGAAAACCTTATAAG	-5035392	False	NA	NA	False	AATAAA	-36	NA	5035414	5032670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034714_5034860
WTC11_00041416	chr17	-	1436	4	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	43.8710230866191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	-5109022	True	NA	-7	True	CATAAA	-18	NA	5111845	5105735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_5106507_5109393_5109869_5111075_5111220_5111799
WTC11_00041417	chr17	-	1585	5	NNC	ENSG00000167840.13	novel	1553	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	37.157603528753	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	-5109022	True	NA	-7	True	CATAAA	-18	NA	5111845	5105735	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_5106529_5108925_5109053_5109393_5109869_5111075_5111220_5111799
WTC11_00041418	chr17	-	1129	4	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	55.2589861973196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	-5109022	True	NA	-7	True	CATAAA	-18	NA	5111845	5105735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_5106534_5108925_5109053_5109710_5109869_5111799
WTC11_00041420	chr17	-	544	3	FSM	ENSG00000091622.16	ENST00000575201.2	734	3	0	190	0	-190	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGAAGAGGCGTTGAC	NA	False	NA	NA	False	NA	NA	NA	6463881	6460758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6460969_6461372_6461557_6463731
WTC11_00041421	chr17	-	1299	1	FSM	ENSG00000215067.11	ENST00000691305.1	1034	1	-71	-194	-62	194	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCCAAAAACATGATTCT	-7012396	False	NA	NA	False	NA	NA	NA	7012411	7011112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7011100_7012400
WTC11_00041422	chr17	-	2897	18	NNC	ENSG00000132535.22	novel	4114	22	NA	NA	250	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	8.39838508121165	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	-7204233	False	NA	NA	False	NA	NA	NA	7204252	7189889	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204067_7204197
WTC11_00041423	chr17	-	3346	15	NNC	ENSG00000004975.12	novel	2989	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	147.982348644033	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-7210369	False	7486	-3	True	AATAAA	-18	NA	7234517	7225341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7226314_7226420_7226959_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229549_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
WTC11_00041431	chr17	-	1313	10	NIC	ENSG00000132522.16	novel	1371	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	10	junction_2	274.819985975107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	-7310149	True	NA	-5	True	AATAAA	-17	NA	7315312	7312659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7312840_7313028_7313098_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
WTC11_00041433	chr17	-	3206	17	NIC	ENSG00000129245.12	novel	2987	17	NA	NA	13	0	intron_retention	FALSE	canonical	3	15	junction_1	67.6655377574139	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTCCTGTGCCTTC	-7613718	True	NA	-1	True	AATAAA	-15	NA	7614884	7591229	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7592158_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
WTC11_00041435	chr17	-	1261	5	FSM	ENSG00000141510.18	ENST00000505014.5	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_4	51.5915448499073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGCTGG	-7681541	True	NA	NA	False	AATACA	-9	NA	7687487	7674525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
WTC11_00041436	chr17	-	578	4	NNC	ENSG00000170043.12	novel	812	4	NA	NA	1	-50	at_least_one_novel_splicesite	FALSE	canonical	1	84	junction_3	536.152548772787	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCCAACTAAGGGC	-7919459	True	NA	NA	False	NA	NA	NA	7931920	7930553	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7930735_7931010_7931150_7931505_7931574_7931730
WTC11_00041439	chr17	-	2261	6	NNC	ENSG00000220205.9	novel	2126	5	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	80.5222950492595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTTGTCTAAGATCT	-8163480	False	NA	-5	True	AATAAA	-15	NA	8163511	8159151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877_8162953_8163377
WTC11_00041441	chr17	-	746	7	FSM	ENSG00000178999.13	ENST00000580998.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	399.240424639924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCCTTCAAT	-8190469	False	NA	NA	False	NA	NA	NA	8210247	8204901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8207317_8207368_8207570_8207626_8207737_8207841_8210176
WTC11_00041445	chr17	-	639	7	NNC	ENSG00000161970.15	novel	528	4	NA	NA	0	98091	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5882.93761653139	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACACCAATGACAGAA	-8221733	True	NA	NA	False	AAAAAG	-3	NA	8383192	8279424	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8279463_8349214_8349240_8377522_8377693_8378588_8378645_8379795_8379937_8382142_8382316_8383156
WTC11_00041446	chr17	-	353	3	NIC	ENSG00000161970.15	novel	528	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	338	junction_1	4467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	-8221733	True	NA	62	True	AATAAA	-15	NA	8383192	8377548	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8377693_8382142_8382316_8383156
WTC11_00041447	chr17	-	2786	1	FSM	ENSG00000189051.6	ENST00000344001.3	2786	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCAGAGACTCTGCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8393489	8390703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8390700_8393500
WTC11_00041448	chr17	-	7765	43	FSM	ENSG00000133026.14	ENST00000692526.1	7809	43	46	-2	0	-1	multi-exon	FALSE	canonical	0	0	junction_36	293.746744083852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAATCTGTTTTCTCA	-8611398	True	NA	-8	True	AATAAA	-32	NA	8630761	8474212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
WTC11_00041449	chr17	-	7997	42	NIC	ENSG00000133026.14	novel	8075	43	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	284.22327232413	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAATCTGTTTTCTCA	-8629895	True	NA	-8	True	AATAAA	-32	NA	8631337	8474212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630920
WTC11_00041454	chr17	-	7691	12	ISM	ENSG00000007237.19	ENST00000542249.5	1799	14	38257	-6171	-22390	-56	3prime_fragment	FALSE	canonical	3	15	junction_9	4.00825594273611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGTTTGCTATATACAG	NA	False	NA	-14	True	ATTAAA	-23	NA	9981885	9910664	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201_9959256_9969676_9969763_9981803
WTC11_00041456	chr17	-	750	2	ISM	ENSG00000007237.19	ENST00000432992.7	8269	14	-230	109171	-230	-60561	5prime_fragment	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCGCTCGGGGGAG	-10198488	False	NA	NA	False	NA	NA	NA	10198836	10019776	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_10019898_10198207
WTC11_00041457	chr17	-	367	3	FSM	ENSG00000109063.15	ENST00000579928.2	480	3	92	21	-3	-15	multi-exon	FALSE	canonical	3	9	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGTTTCAATCTGG	NA	False	NA	NA	False	AATAAA	-2	NA	10629937	10628546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10628680_10629596_10629735_10629841
WTC11_00041458	chr17	-	702	4	FSM	ENSG00000109063.15	ENST00000579489.2	609	4	-38	-55	-38	55	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGACAACTCCTCCCGT	NA	False	NA	NA	False	NA	NA	NA	10652006	10648579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10648650_10649576_10649686_10650373_10650402_10651511
WTC11_00041459	chr17	-	3216	8	NNC	ENSG00000133028.12	novel	9577	6	NA	NA	0	19864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.184976378054	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGCAGACCATCTTAGT	-10688732	True	NA	NA	False	NA	NA	NA	10697527	10652609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10652640_10677478_10677874_10679253_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
WTC11_00041460	chr17	-	1737	7	NNC	ENSG00000133028.12	novel	9577	6	NA	NA	0	19864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.94413345738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGCAGACCATCTTAGT	-10688732	True	NA	NA	False	NA	NA	NA	10697527	10652609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10652639_10680336_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
WTC11_00041463	chr17	-	559	4	FSM	ENSG00000187824.9	ENST00000578345.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.9795211273157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCAATCAATTTTTTA	-10729600	True	NA	NA	False	AATAAA	-27	NA	10729986	10715421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715589_10725010_10725135_10726203_10726265_10729779
WTC11_00041464	chr17	-	471	1	FSM	ENSG00000264176.1	ENST00000584384.1	429	1	46	-88	46	88	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTCAAAACCTTGGT	NA	False	NA	NA	False	AATAAA	-43	NA	10716384	10715913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715900_10716400
WTC11_00041465	chr17	-	1391	2	FSM	ENSG00000263429.3	ENST00000581851.1	1530	2	139	0	139	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGATTTGCGAGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	10803960	10794912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10795949_10803605
WTC11_00041466	chr17	-	452	2	FSM	ENSG00000266368.1	ENST00000580270.1	463	2	0	11	0	-11	multi-exon	FALSE	canonical	1	2	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTATACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	11977594	11953899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11954005_11977247
WTC11_00041467	chr17	-	2603	6	NIC	ENSG00000154957.14	novel	2261	7	NA	NA	-672	23539	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	44.5735347487722	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTATACTCTTGTTT	-11990889	False	NA	NA	False	AATAAA	-13	NA	11991692	11953899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_11954005_11977247_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973
WTC11_00041468	chr17	-	729	5	FSM	ENSG00000154957.14	ENST00000582607.1	729	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	44.7346342334438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCACCAAAGAACTC	-11990217	False	NA	NA	False	NA	NA	NA	11991020	11978338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983405_11984112_11984192_11990461_11990551_11990973
WTC11_00041469	chr17	-	2909	24	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	175.03291615902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-13005606	True	NA	-6	True	AATAAA	-15	NA	13017953	12992390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002445_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
WTC11_00041477	chr17	-	8800	10	NNC	ENSG00000259024.6	novel	2833	7	NA	NA	-46	7751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.650834191842	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACATAAGGTCAGTTCCT	-15562312	True	NA	-3	True	ATTAAA	-17	NA	15563607	15428269	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_15433928_15436021_15438201_15440207_15440286_15503097_15503233_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
WTC11_00041479	chr17	-	222	1	FSM	ENSG00000266538.1	ENST00000584643.1	317	1	-154	249	-154	-249	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGTACTTTA	NA	False	NA	NA	False	AAGAAA	-22	NA	15531243	15531021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15531000_15531200
WTC11_00041480	chr17	-	2472	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	3	-2	intron_retention	FALSE	canonical	2	4	junction_8	18.0058323884235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCTATGTGCCAGAT	-15683052	True	NA	-18	True	AATAAA	-13	NA	15684294	15627968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677278_15677574_15677722_15680864_15680954_15682860_15682952_15683035_15683158_15684195
WTC11_00041487	chr17	-	613	1	FSM	ENSG00000267227.1	ENST00000587972.1	613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGCTGCAGTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	15749315	15748702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15748700_15749300
WTC11_00041489	chr17	-	331	1	FSM	ENSG00000275413.1	ENST00000616896.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAACTTGTTACCCTTG	-16023642	False	NA	-4	True	AATAAA	-17	NA	16023653	16023322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16023300_16023700
WTC11_00041490	chr17	-	10941	47	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_25	51.6998023711638	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAGTAACCCCTGCAG	-16201114	True	NA	-49	True	AATAAA	-24	NA	16215548	16029156	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16087171_16087346_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00041492	chr17	-	8531	47	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_32	45.8542113186147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	-16201095	True	NA	-13	True	AATAAA	-20	NA	16215529	16031403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
WTC11_00041494	chr17	-	1135	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	0	26827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	707.874395638096	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	-16339500	True	NA	NA	False	AAAAAG	-2	NA	16353445	16315706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315734_16342536_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
WTC11_00041495	chr17	-	1162	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	0	26827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	707.874395638096	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	-16339524	True	NA	NA	False	AAAAAG	-2	NA	16353469	16315706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315735_16342534_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
WTC11_00041496	chr17	-	490	1	FSM	ENSG00000235554.1	ENST00000414124.1	1034	1	442	102	442	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTCTGTGTCCCCTCC	NA	False	NA	NA	False	NA	NA	NA	16617439	16616949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16616900_16617400
WTC11_00041497	chr17	-	4225	6	FSM	ENSG00000197566.10	ENST00000311331.12	4241	6	3	13	3	-1	multi-exon	FALSE	canonical	2	2	junction_1	3.05941170815567	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATATTTTCGTTGTGC	-16653694	True	NA	NA	False	ATTAAA	-3	NA	16653847	16620746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328_16647395_16649657_16649747_16653763
WTC11_00041499	chr17	-	691	2	FSM	ENSG00000141030.13	ENST00000486032.1	725	2	34	0	34	0	multi-exon	FALSE	canonical	3	797	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17247819	False	NA	-31	True	ATTAAA	-19	NA	17247853	17246834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479
WTC11_00041501	chr17	-	1663	4	FSM	ENSG00000171953.16	ENST00000496852.5	1662	4	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	107.954723019524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGCCCTGTTTTCA	NA	False	NA	-19	True	ATTAAA	-20	NA	18025632	18018261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623
WTC11_00041507	chr17	-	497	2	FSM	ENSG00000177302.15	ENST00000477508.1	600	2	0	103	0	-103	multi-exon	FALSE	canonical	3	164	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGATGATTGCTACACC	NA	False	NA	NA	False	NA	NA	NA	18282813	18280277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18280659_18282697
WTC11_00041511	chr17	-	1714	11	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_10	162.070385943885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357255	True	NA	-9	True	ATTAAA	-12	NA	18363493	18328527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
WTC11_00041513	chr17	-	3907	1	ISM	ENSG00000249459.11	ENST00000285274.9	5145	4	19893	0	19511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTTCTTTTAA	-18662322	False	NA	3	True	AATAAA	-27	NA	18662335	18658428	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18658400_18662300
WTC11_00041515	chr17	-	240	3	FSM	ENSG00000154016.14	ENST00000571380.1	610	3	144	226	90	-226	multi-exon	FALSE	canonical	2	2	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTCTGGCCCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	19046867	19035957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19036081_19041806_19041905_19046848
WTC11_00041516	chr17	-	428	3	FSM	ENSG00000266311.6	ENST00000460772.6	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19174428	19164208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19164373_19171958_19172092_19174297
WTC11_00041517	chr17	-	891	7	FSM	ENSG00000108641.20	ENST00000582857.2	928	7	37	0	3	0	multi-exon	TRUE	canonical	2	5	junction_1	111.54134759013	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTCCCTAGCCTCCT	-19377662	False	483	NA	False	NA	NA	NA	19378145	19337553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19337749_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
WTC11_00041518	chr17	-	901	7	FSM	ENSG00000108641.20	ENST00000647056.1	904	7	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_4	114.711837033305	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTTCTGTATATTTCA	-19360843	True	NA	-3	True	AATAAA	-16	NA	19362597	19340917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347873_19357839_19357952_19360319_19360389_19362506
WTC11_00041519	chr17	-	502	1	FSM	ENSG00000264932.3	ENST00000578640.1	563	1	68	-7	68	7	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGACAAGAATAGAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	19649867	19649365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19649400_19649900
WTC11_00041520	chr17	-	233	1	FSM	ENSG00000180638.19	ENST00000456947.3	3114	1	936	1945	-458	-1945	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGCTCTGGGGGCTGCA	NA	False	NA	NA	False	NA	NA	NA	19717901	19717668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19717700_19717900
WTC11_00041521	chr17	-	488	2	FSM	ENSG00000108602.18	ENST00000575860.1	612	2	124	0	111	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATACAGAGAGGGCCTG	-19744983	True	NA	NA	False	NA	NA	NA	19745022	19743030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19743464_19744967
WTC11_00041523	chr17	-	273	1	FSM	ENSG00000270091.1	ENST00000602353.1	681	1	269	139	269	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATGTAGAGAGTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	19897001	19896728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19896700_19897000
WTC11_00041526	chr17	-	533	1	FSM	ENSG00000265916.1	ENST00000584274.1	634	1	395	-294	395	294	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAGAAAGGAGGGTGG	-20532465	False	NA	NA	False	NA	NA	NA	20532486	20531953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20532000_20532500
WTC11_00041527	chr17	-	1008	1	FSM	ENSG00000265790.1	ENST00000578666.1	742	1	-4	-262	-4	262	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCCCAGCTACTCGGGAA	-20902669	False	NA	NA	False	ATTAAA	-39	NA	20902684	20901676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20901700_20902700
WTC11_00041528	chr17	-	412	1	FSM	ENSG00000265683.1	ENST00000582878.1	727	1	140	175	140	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACCAGCATGGGATTCC	-27352269	False	NA	50	True	AAGAAA	-26	NA	27352444	27352032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27352000_27352400
WTC11_00041529	chr17	-	2540	3	ISM	ENSG00000232859.10	ENST00000379103.7	1685	5	8483	0	-541	0	intron_retention	FALSE	canonical	3	28	junction_2	0.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTGTCTCCTTCCTGAG	-27883493	False	NA	-1	True	GATAAA	-19	NA	27883838	27878313	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_27879491_27880273_27880367_27882568
WTC11_00041530	chr17	-	2190	3	FSM	ENSG00000232859.10	ENST00000460380.6	2196	3	6	0	6	0	multi-exon	FALSE	canonical	2	6	junction_2	11	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893008	True	NA	2	True	AGTAAA	-18	NA	27893353	27878357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27880367_27882568_27882713_27893316
WTC11_00041531	chr17	-	958	1	FSM	ENSG00000266830.1	ENST00000579045.1	1553	1	485	110	485	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCCTGGTACTCGCAA	-28247503	False	NA	NA	False	NA	NA	NA	28247521	28246563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28246600_28247500
WTC11_00041532	chr17	-	863	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	-11	0	0	multi-exon	FALSE	canonical	2	4	junction_5	67.2577133123035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-28333130	True	NA	-3	True	AATAAA	-18	NA	28335439	28328325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
WTC11_00041533	chr17	-	2469	1	NIC	ENSG00000258472.9	novel	2091	8	NA	NA	9893	-21810	mono-exon	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTTGATAGAGTCTT	-28604279	False	NA	-1	True	AATAAA	-23	NA	28604290	28601821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28601800_28604300
WTC11_00041534	chr17	-	2205	5	NNC	ENSG00000167525.15	novel	1684	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	23.8432380351327	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTGTGCCTGGCCT	-28704852	False	NA	0	True	AATAAA	-21	NA	28707883	28703193	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28704213_28704306_28704436_28704707_28704844_28706679_28706764_28707046
WTC11_00041535	chr17	-	1671	4	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	37	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	22.0655588845805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTGCCACTGTGCCT	-28711246	False	3031	-5	True	AATAAA	-16	NA	28711262	28703198	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
WTC11_00041537	chr17	-	745	4	FSM	ENSG00000109113.20	ENST00000484161.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	529.474162626364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGGGGCTGGAGTTC	-28715475	False	NA	-5	True	ATTAAA	-16	NA	28715485	28714286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715215_28715455
WTC11_00041538	chr17	-	2440	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	309.914125899577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886257	True	NA	-7	True	AATAAA	-17	NA	28897596	28879338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28888944_28889027_28897525
WTC11_00041543	chr17	-	336	2	FSM	ENSG00000063015.21	ENST00000539265.1	601	2	0	265	0	-265	multi-exon	FALSE	canonical	2	4	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTGCTGGGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	28960973	28960504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28960672_28960804
WTC11_00041545	chr17	-	323	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	62	-44	62	44	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTTCAGGCCGGG	NA	False	NA	NA	False	AATAAA	-25	NA	29340760	29340437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29340400_29340800
WTC11_00041547	chr17	-	275	1	FSM	ENSG00000264007.1	ENST00000582367.1	638	1	-16	379	-16	-379	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAAATTTTAGGAAAAG	-29622258	False	NA	NA	False	NA	NA	NA	29622270	29621995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29622000_29622300
WTC11_00041548	chr17	-	2435	13	NNC	ENSG00000108578.15	novel	2307	12	NA	NA	0	58349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.425404322252	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGCTTCGCATCCTCA	-30287397	True	NA	NA	False	NA	NA	NA	30292042	30189853	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_30189884_30248202_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
WTC11_00041549	chr17	-	335	3	FSM	ENSG00000231421.8	ENST00000436477.7	1352	3	895	122	895	-120	multi-exon	FALSE	canonical	1	2	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTGGGCCCCGGTT	-30576088	False	NA	NA	False	NA	NA	NA	30576105	30573592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30573778_30573935_30573986_30576005
WTC11_00041550	chr17	-	4619	8	Fusion	ENSG00000176390.12_ENSG00000265791.1	novel	2873	8	NA	NA	-37	522	intron_retention	FALSE	canonical	0	0	junction_7	59.6226227438641	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCAGGTGTTGTGGTG	-30818667	True	NA	NA	False	NA	NA	NA	30824729	30780970	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824526
WTC11_00041551	chr17	-	782	5	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-123	7971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.9660979437743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTCTGGTACTGGTAT	-31095550	False	NA	NA	False	NA	NA	NA	31095573	31082815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_31082842_31090739_31090936_31091024_31091119_31093372_31093492_31095226
WTC11_00041552	chr17	-	1047	4	FSM	ENSG00000172301.11	ENST00000378634.6	1041	4	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_2	275.301450938583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCGTCTGCTTTTTTCC	-31859061	False	NA	0	True	AATAAA	-22	NA	31859074	31851864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31858757
WTC11_00041553	chr17	-	1525	1	FSM	ENSG00000265574.1	ENST00000583470.1	1029	1	-82	-414	-82	414	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCAAATGTAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	32112672	32111147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32111100_32112700
WTC11_00041554	chr17	-	5578	6	ISM	ENSG00000108666.10	ENST00000577809.6	4547	10	2663	0	-1569	0	intron_retention	FALSE	canonical	3	469	junction_1	35.4457331705806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTTTTTGTTTAAT	-32339438	False	NA	-1	True	AATAAA	-18	NA	32339510	32328440	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896
WTC11_00041555	chr17	-	1214	9	NNC	ENSG00000108666.10	novel	4581	10	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	210.967377513681	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGAGTCCTAGATAGA	-32340086	True	NA	-18	True	AATAAA	-16	NA	32342144	32331593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337962_32339812_32339925_32341203_32341285_32341999
WTC11_00041556	chr17	-	1363	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	201.987226096535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGAGTCCTAGATAGA	-32340098	True	NA	-18	True	AATAAA	-16	NA	32342156	32331593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
WTC11_00041558	chr17	-	1905	15	NNC	ENSG00000176658.17	novel	427	5	NA	NA	282	1699	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.8043284180385	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACCTTCTATAATTTC	-32876832	False	NA	NA	False	AATAAA	-5	NA	32876842	32736658	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_32736848_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
WTC11_00041559	chr17	-	1911	11	FSM	ENSG00000176658.17	ENST00000583621.1	1916	11	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	35.8892741637387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTATTACACTT	-32874956	True	NA	NA	False	ATTAAA	-20	NA	32877172	32759811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32760127_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
WTC11_00041560	chr17	-	3706	10	FSM	ENSG00000108684.15	ENST00000225823.7	3750	10	44	0	44	0	multi-exon	TRUE	canonical	0	0	junction_7	1.72848324290045	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTTATTTCTGCCT	-33293180	True	NA	3	True	ATTAAA	-18	NA	33293251	33013086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_33014067_33015970_33016040_33017604_33017685_33021218_33021311_33023860_33024015_33025925_33025983_33028241_33028393_33088862_33088991_33111916_33112068_33291407
WTC11_00041561	chr17	-	1306	1	Genic_Genomic	ENSG00000279668.3	novel	NA	NA	NA	NA	5615	52	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGGGCTCTGTGGCT	NA	False	NA	NA	False	CATAAA	-12	NA	33828952	33827646	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_33827600_33829000
WTC11_00041562	chr17	-	1530	4	ISM	ENSG00000172716.17	ENST00000308377.8	4910	5	10799	2228	184	-634	3prime_fragment	FALSE	canonical	1	1	junction_2	20.2703943940144	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGGTGATCACATTGT	NA	False	NA	NA	False	AAGAAA	-31	NA	35362808	35352532	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_35353140_35353335_35354060_35360242_35360372_35362738
WTC11_00041563	chr17	-	7757	5	Fusion	ENSG00000172123.13_ENSG00000267745.1_ENSG00000267547.1	novel	2506	4	NA	NA	-41	-2	multi-exon	FALSE	canonical	3	8	junction_1	9.67923034130297	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCTGAGGGGTT	-35432516	False	194	-2	True	AATAAA	-15	NA	35432541	35403838	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_35407592_35409464_35411928_35420273_35420382_35421989_35423069_35432187
WTC11_00041567	chr17	-	485	1	FSM	ENSG00000267312.1	ENST00000588022.1	1070	1	276	309	276	-309	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATGGATTTACTGCGC	-35460263	False	NA	NA	False	NA	NA	NA	35460274	35459789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35459800_35460300
WTC11_00041568	chr17	-	949	2	Antisense	novelGene_ENSG00000270647.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35840893	35839405	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_-_35840292_35840830
WTC11_00041569	chr17	-	4226	13	FSM	ENSG00000278259.5	ENST00000611622.4	4226	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	64.612251590202	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAATCACGTTTTGAT	-36509896	False	NA	-6	True	ATTAAA	-20	NA	36509922	36495754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36501851_36501902_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802
WTC11_00041571	chr17	-	1669	12	NNC	ENSG00000278259.5	novel	1640	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	61.7043068805031	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTCTGCTCACTTAGT	-36529875	True	NA	-25	True	ATTAAA	-19	NA	36534806	36513087	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527363_36527457_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
WTC11_00041573	chr17	-	567	2	FSM	ENSG00000278540.5	ENST00000614438.1	569	2	0	2	0	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGATTGTTCTGTCTTA	-37330383	False	NA	-2	True	AATAAA	-22	NA	37330399	37328646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37328987_37330172
WTC11_00041574	chr17	-	271	1	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37454592	37454321	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_37454300_37454600
WTC11_00041575	chr17	-	8100	22	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	35	junction_20	23.3288625454478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGGCTACTAAGCCTT	-37604621	True	NA	-15	True	AATACA	-12	NA	37609381	37514807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596342_37600362_37600404_37609278
WTC11_00041576	chr17	-	4306	22	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	24.211651774149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	-37604615	True	NA	NA	False	AATAAA	-21	NA	37609375	37518460	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542428_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
WTC11_00041578	chr17	-	227	2	ISM	ENSG00000278299.6	ENST00000622206.2	2105	14	8454	1891	8454	-1891	internal_fragment	FALSE	canonical	3	23	junction_1	0	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGGGACCTGCCAC	NA	False	NA	NA	False	AAGAAA	-9	NA	38060180	38059583	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_38059711_38060080
WTC11_00041580	chr17	-	3382	25	Fusion	ENSG00000274611.4_ENSG00000274487.3	novel	2077	14	NA	NA	0	1	multi-exon	TRUE	canonical	0	0	junction_1	102.818939767924	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGATTTTAGACAGAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	38257152	38181657	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_38182543_38183523_38183677_38184046_38184147_38184609_38184676_38185059_38185155_38185867_38185989_38186531_38186581_38187833_38187944_38188272_38188381_38188823_38188905_38189386_38189427_38190709_38190796_38190957_38191031_38195879_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202735_38202982_38205634_38205743_38209050_38209117_38219045_38219124_38242200_38242286_38256897
WTC11_00041581	chr17	-	3952	23	Fusion	ENSG00000274611.4_ENSG00000274487.3	novel	2077	14	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_1	106.391177475522	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGATTTTAGACAGAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	38257189	38181657	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_38182543_38183523_38183677_38184046_38184147_38184609_38184676_38185059_38185155_38185867_38185989_38186531_38186581_38187833_38187944_38188272_38188381_38188823_38188905_38189386_38189427_38190709_38190796_38190957_38191031_38195879_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202982_38205634_38205743_38209050_38209117_38219045_38219124_38242200_38242286_38256897
WTC11_00041582	chr17	-	458	4	FSM	ENSG00000276170.5	ENST00000617855.1	482	4	24	0	11	0	multi-exon	FALSE	canonical	1	2	junction_3	28.1780056072107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAGAAATTAGCCA	-38451967	True	NA	-27	True	NA	NA	NA	38452420	38450587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451305_38451394_38451625_38451757_38452317
WTC11_00041583	chr17	-	461	2	FSM	ENSG00000277258.5	ENST00000610747.1	459	2	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	-38735524	False	NA	-4	True	AATAAA	-15	NA	38735596	38733897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38734254_38735491
WTC11_00041584	chr17	-	2695	10	ISM	ENSG00000277258.5	ENST00000620225.5	2634	11	161	2	9	0	3prime_fragment	FALSE	canonical	0	0	junction_4	45.6897751751478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	-38748164	False	NA	-6	True	AATAAA	-13	NA	38748175	38733899	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
WTC11_00041585	chr17	-	1334	11	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.3070170639456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	38748369	38733899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38734254_38735491_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
WTC11_00041586	chr17	-	1259	8	NNC	ENSG00000276293.5	novel	547	5	NA	NA	0	616	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	37.3772821977441	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAGCAAACAGC	NA	False	NA	NA	False	AATAAA	-4	NA	38799556	38775987	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_38776308_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
WTC11_00041587	chr17	-	2446	7	NNC	ENSG00000273559.5	novel	3067	10	NA	NA	0	9034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.2375195692607	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTGAGCCAGATT	NA	False	NA	NA	False	NA	NA	NA	38810595	38791406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_38791434_38800452_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467
WTC11_00041588	chr17	-	3168	10	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	76	0	intron_retention	FALSE	canonical	3	45	junction_5	27.8505712865581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	-38824828	True	NA	-8	True	AATAAA	-30	NA	38825230	38800440	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
WTC11_00041590	chr17	-	1948	2	ISM	ENSG00000161395.14	ENST00000619169.4	2094	5	10268	1094	10268	559	intron_retention	FALSE	canonical	3	114	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCATACTCCCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	39674348	39672216	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_39672867_39673050
WTC11_00041591	chr17	-	4656	8	FSM	ENSG00000073605.19	ENST00000477054.6	4655	8	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_5	12.2457822809925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	-39919843	False	NA	0	True	ATTAAA	-23	NA	39919854	39904594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906988_39908957_39909043_39909755_39909925_39912325_39912498_39917081
WTC11_00041595	chr17	-	652	3	NNC	ENSG00000186395.9	novel	2143	8	NA	NA	3566	84485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACACAGTGGCTCATG	-40806279	True	NA	NA	False	NA	NA	NA	40819048	40733631	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40733659_40818119_40818483_40818786
WTC11_00041596	chr17	-	651	3	NNC	ENSG00000186395.9	novel	2143	8	NA	NA	3566	84485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACACAGTGGCTCATG	-40806279	True	NA	NA	False	NA	NA	NA	40819048	40733631	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40733658_40818119_40818483_40818786
WTC11_00041597	chr17	-	812	1	FSM	ENSG00000198443.8	ENST00000398472.2	812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCTCTTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41184911	41184099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41184100_41184900
WTC11_00041598	chr17	-	537	2	FSM	ENSG00000173805.16	ENST00000458656.5	601	2	0	64	0	-64	multi-exon	FALSE	canonical	2	2	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTCACGCTCCCAGT	-41724257	False	NA	NA	False	NA	NA	NA	41725081	41717805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41718027_41724765
WTC11_00041599	chr17	-	3198	15	NNC	ENSG00000173801.17	novel	3200	15	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_14	114.248141145062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTGTTTAGGGGAGT	-41773312	False	NA	-3	True	AATAAA	-17	NA	41786676	41754605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786565
WTC11_00041600	chr17	-	3476	14	NIC	ENSG00000173801.17	novel	3505	14	NA	NA	16	-2	intron_retention	FALSE	canonical	3	19	junction_13	131.337858731192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTGTTTAGGGGAGT	-41773318	True	NA	-3	True	AATAAA	-17	NA	41786682	41754605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771860_41786587
WTC11_00041601	chr17	-	3625	15	NNC	ENSG00000173801.17	novel	3505	14	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_14	170.263241566027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTGTTTAGGGGAGT	-41773333	True	NA	-3	True	AATAAA	-17	NA	41786697	41754605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41772817_41772927_41786565
WTC11_00041603	chr17	-	3000	9	NIC	ENSG00000141696.13	novel	2791	9	NA	NA	-20	5	intron_retention	FALSE	canonical	2	3	junction_8	76.2576840390527	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCGTCTCCCTGGAGC	-41812613	False	NA	-2	True	AATAAA	-29	NA	41812624	41801941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810679_41811035_41811131_41811285_41811453_41812143_41812363
WTC11_00041604	chr17	-	1935	7	NIC	ENSG00000141696.13	novel	2352	8	NA	NA	10	2	intron_retention	FALSE	canonical	2	7	junction_4	66.1337029559563	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTACCCGTGGTCGTCT	-41811648	False	NA	-11	True	AATAAA	-20	NA	41811659	41801950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41810862_41811035_41811131_41811285_41811453
WTC11_00041606	chr17	-	3705	28	NNC	ENSG00000131473.17	novel	4309	29	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_22	432.297854311411	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCTTTCTTTTTCCAT	-41882142	True	NA	73	True	NA	NA	NA	41918962	41867487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907570_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
WTC11_00041608	chr17	-	1783	14	NIC	ENSG00000168259.17	novel	1806	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	224.650840194289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCCTTTGCTCTGGCAT	-42007888	True	NA	-19	True	AATAAA	-16	NA	42017424	41976437	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987906_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
WTC11_00041609	chr17	-	2029	16	FSM	ENSG00000168259.17	ENST00000674179.1	2025	16	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_15	344.760683502178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42014387	False	9536	-28	True	NA	NA	NA	42017151	41976522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42003358_42003558_42017039
WTC11_00041612	chr17	-	259	1	FSM	ENSG00000168259.17	ENST00000586240.2	4172	1	157	3756	6	-3756	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTCCTGGGTGATCTT	-42014232	False	NA	NA	False	GGGGCT	-36	NA	42016996	42016737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42016700_42017000
WTC11_00041613	chr17	-	1362	6	NNC	ENSG00000108773.11	novel	2990	18	NA	NA	609	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	80.7351224684771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGATTGTTTCTTT	-42112491	False	NA	-9	True	AATAAA	-12	NA	42115224	42113117	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114888
WTC11_00041615	chr17	-	2497	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.97791931915893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-42193837	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
WTC11_00041616	chr17	-	463	3	FSM	ENSG00000173757.10	ENST00000481253.2	491	3	28	0	28	0	multi-exon	FALSE	canonical	3	185	junction_2	12	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAATGTTCGCATTCT	NA	False	NA	NA	False	NA	NA	NA	42210564	42207558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42207729_42210170_42210302_42210402
WTC11_00041620	chr17	-	378	1	FSM	ENSG00000168610.16	ENST00000590776.1	1483	1	1026	79	978	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATTTAGACTGTGTTA	-42387385	False	NA	NA	False	AATAAA	-32	NA	42387395	42387017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42387000_42387400
WTC11_00041621	chr17	-	4342	11	FSM	ENSG00000068137.15	ENST00000591490.5	4339	11	0	-3	0	0	multi-exon	FALSE	canonical	3	38	junction_2	27.421889066948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42676886	False	NA	44	True	AAAAAG	-18	NA	42676897	42667913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42670377_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
WTC11_00041622	chr17	-	2844	13	NIC	ENSG00000068137.15	novel	3026	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	40.4085902583432	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42676541	True	NA	44	True	AAAAAG	-18	NA	42676992	42667913	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672213_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
WTC11_00041624	chr17	-	2280	19	FSM	ENSG00000108799.13	ENST00000588897.5	2283	19	3	0	1	0	multi-exon	FALSE	canonical	1	1	junction_15	13.3630455980035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGCACAAAACTGTCTCA	-42743453	True	NA	NA	False	NA	NA	NA	42745034	42702380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42727634_42727764_42728824_42728953_42730827_42730919_42745010
WTC11_00041626	chr17	-	795	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	0	64659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATACTTCTTTAAAA	-42785819	True	NA	NA	False	NA	NA	NA	42798704	42730487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42730516_42797637_42798168_42798467
WTC11_00041627	chr17	-	797	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	0	64659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATACTTCTTTAAAA	-42785819	True	NA	NA	False	NA	NA	NA	42798704	42730487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42730516_42797635_42798168_42798467
WTC11_00041632	chr17	-	1808	17	FSM	ENSG00000108825.18	ENST00000360221.8	1790	17	82	-100	72	100	multi-exon	FALSE	canonical	1	1	junction_16	153.156323326855	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGCACTGTAATGT	-42979895	False	NA	88	True	TATAAA	-18	NA	42979921	42950425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42979904
WTC11_00041634	chr17	-	4246	23	NIC	ENSG00000012048.23	novel	7088	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_22	24.4148038007292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43125225	False	NA	-5	True	AATAAA	-21	NA	43125300	43044294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099878_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
WTC11_00041637	chr17	-	488	2	FSM	ENSG00000267002.4	ENST00000659136.1	622	2	134	0	134	0	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACCCTGTGACCTGCAC	NA	False	NA	NA	False	GATAAA	-44	NA	43159875	43148704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43148784_43159466
WTC11_00041638	chr17	-	863	3	FSM	ENSG00000188825.15	ENST00000592094.1	1042	3	18	161	-3	-161	multi-exon	FALSE	canonical	1	1	junction_1	2.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTTTCTGTACCTTTA	-43388227	True	NA	NA	False	NA	NA	NA	43388317	43377367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43377814_43381272_43381661_43388288
WTC11_00041639	chr17	-	2323	14	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	-77	68112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	474.093067536734	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTAGTGGAGCTGAAGC	-43546381	False	NA	NA	False	NA	NA	NA	43546417	43459731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43459757_43527842_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545371_43545557_43545669_43546304
WTC11_00041640	chr17	-	2147	12	FSM	ENSG00000175832.13	ENST00000538265.5	2147	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_11	331.921677508415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545901	False	NA	-4	True	AATAAA	-20	NA	43545937	43527843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545860
WTC11_00041641	chr17	-	547	1	Genic_Genomic	ENSG00000091947.10	novel	NA	NA	NA	NA	-329	2103	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATATATCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	44019776	44019229	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_44019200_44019800
WTC11_00041642	chr17	-	3803	28	NNC	ENSG00000108840.16	novel	5326	27	NA	NA	0	37383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.0043908895461	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTGGTCGGGCACGG	-44118641	True	NA	NA	False	AAAAAG	-3	NA	44123638	44039362	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44039391_44078293_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
WTC11_00041648	chr17	-	4060	14	NNC	ENSG00000087152.16	novel	3951	13	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	51	junction_13	37.6943484533881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-44200162	False	NA	-14	True	AATAAA	-19	NA	44200175	44191804	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44192432_44192613_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019_44198131_44199495
WTC11_00041650	chr17	-	4888	20	Fusion	ENSG00000288877.1_ENSG00000108312.15	novel	4997	21	NA	NA	-9	0	multi-exon	FALSE	canonical	3	62	junction_19	109.074042807647	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-44221515	False	NA	-13	True	AATAAA	-13	NA	44221635	44205039	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
WTC11_00041651	chr17	-	4866	19	NIC	ENSG00000108312.15	novel	2683	20	NA	NA	-150	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	140.81755335658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGACTGCTGTCTGGT	-44219780	False	NA	-14	True	AATAAA	-12	NA	44219900	44205040	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
WTC11_00041652	chr17	-	7293	7	FSM	ENSG00000186566.13	ENST00000335500.8	8109	7	825	-9	825	6	multi-exon	FALSE	canonical	2	7	junction_5	42.760638702225	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTGTCGTAATTGTTG	NA	False	NA	2	True	AATAAA	-24	NA	44465110	44395274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44438670_44438716_44464471
WTC11_00041653	chr17	-	3451	1	FSM	ENSG00000267160.1	ENST00000591628.1	2569	1	-192	-690	-192	690	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAGCTAAAAAGAGAAG	-44676438	False	NA	NA	False	AAAAAG	-1	NA	44676449	44672998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44673000_44676400
WTC11_00041655	chr17	-	3508	29	NIC	ENSG00000108883.13	novel	3675	28	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_28	261.136927488165	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTTGCTCTGCTC	-44899005	False	NA	-112	True	NA	NA	NA	44899037	44850915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44895825_44895990_44898974
WTC11_00041656	chr17	-	4097	16	NNC	ENSG00000186185.14	novel	4088	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	43.422677127152	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-44943798	True	NA	-4	True	AATAAA	-15	NA	44947773	44924710	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928552_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
WTC11_00041657	chr17	-	1629	3	NNC	ENSG00000131094.4	novel	1527	2	NA	NA	-77	23060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATATATATATA	-44967794	True	NA	NA	False	NA	NA	NA	44968380	44936632	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44936659_44959693_44960368_44967451
WTC11_00041658	chr17	-	1638	3	NNC	ENSG00000131094.4	novel	1527	2	NA	NA	-77	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGCACACAGTGGCTT	-44967794	True	NA	NA	False	NA	NA	NA	44968380	44954750	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44954785_44959692_44960368_44967451
WTC11_00041660	chr17	-	377	2	FSM	ENSG00000233175.2	ENST00000393507.2	377	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAAGTGTACAATTC	-45241030	False	NA	NA	False	CATAAA	-4	NA	45241197	45240314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45240605_45241110
WTC11_00041664	chr17	-	413	1	FSM	ENSG00000278770.1	ENST00000585071.2	281	1	82	-214	82	214	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAATTACAGGCAAGC	NA	False	NA	NA	False	NA	NA	NA	45526664	45526251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45526300_45526700
WTC11_00041665	chr17	-	2851	7	FSM	ENSG00000120071.15	ENST00000576870.5	2848	7	0	-3	0	1	multi-exon	FALSE	canonical	3	19	junction_6	30.9663796183323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTACCAGGCCTTTCT	NA	False	NA	-7	True	AATAAA	-18	NA	46040065	46029914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039701
WTC11_00041666	chr17	-	4719	13	NIC	ENSG00000120071.15	novel	5574	15	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	23.6189366116823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTACCAGGCCTTTCT	NA	False	NA	-7	True	AATAAA	-18	NA	46172172	46029914	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854
WTC11_00041668	chr17	-	4926	16	FSM	ENSG00000120071.15	ENST00000648792.1	4933	16	7	0	1	0	multi-exon	FALSE	canonical	1	1	junction_2	27.9749093931608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGACTAGTGCTTAAA	-46223245	True	NA	-77	True	NA	NA	NA	46225366	46029984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032168_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
WTC11_00041670	chr17	-	1140	5	FSM	ENSG00000228696.10	ENST00000570618.5	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	136.208250484323	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGCAAGAAACA	NA	False	NA	NA	False	ATTAAA	-10	NA	46361764	46274783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46275419_46299525_46299666_46352819_46352931_46358249_46358415_46361675
WTC11_00041672	chr17	-	757	5	FSM	ENSG00000228696.10	ENST00000434041.6	798	5	0	41	0	-41	multi-exon	FALSE	canonical	2	2	junction_1	138.095075944076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGCAAAAAACAAAATAAA	NA	False	NA	NA	False	AAAACA	-28	NA	46361745	46299174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46299446_46299525_46299666_46352819_46352931_46358249_46358415_46361675
WTC11_00041673	chr17	-	8691	2	FSM	ENSG00000262879.6	ENST00000658121.1	8712	2	21	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGCACCTCTGATCTT	-47067323	True	NA	NA	False	NA	NA	NA	47067513	47048162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47056754_47067413
WTC11_00041674	chr17	-	218	2	FSM	ENSG00000262879.6	ENST00000571665.1	255	2	37	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGAATGTTAGGAGTA	-47099066	True	NA	NA	False	NA	NA	NA	47100286	47099835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47100022_47100254
WTC11_00041675	chr17	-	5545	20	NNC	ENSG00000004897.12	novel	2579	19	NA	NA	0	3212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.3823504769062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCGTGGTGGCGGGC	-47186817	True	NA	NA	False	ACTAAA	-44	NA	47189224	47114490	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_47114521_47117943_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
WTC11_00041677	chr17	-	430	4	FSM	ENSG00000006025.12	ENST00000578461.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	13.0979218029257	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTCCCCGCCTCAC	NA	False	NA	NA	False	NA	NA	NA	47809115	47808215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47808400_47808537_47808661_47808863_47808947_47809075
WTC11_00041690	chr17	-	1687	8	FSM	ENSG00000167085.13	ENST00000512041.7	1659	8	43	-71	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1519.63978008753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346731	True	NA	-23	True	AATAAA	-4	NA	49414858	49404071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49404755_49404857_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
WTC11_00041694	chr17	-	254	3	FSM	ENSG00000121067.19	ENST00000504889.5	400	3	0	146	0	36	multi-exon	FALSE	canonical	3	191	junction_1	4.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGACTTCTTGTGTT	NA	False	NA	NA	False	AATAGA	-21	NA	49611318	49607213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49607373_49607873_49607930_49611279
WTC11_00041707	chr17	-	2796	8	NNC	ENSG00000108960.9	novel	2569	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	153.917284969054	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419629	True	NA	-19	True	AATAAA	-14	NA	55421924	55392621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_55394535_55401468_55401539_55402165_55402304_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
WTC11_00041710	chr17	-	2604	7	NNC	ENSG00000121058.5	novel	2634	7	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	122.66168468144	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTCTACCGAGTTAT	-56960070	True	NA	-18	True	AATAAA	-14	NA	56961027	56938201	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_56939155_56942034_56942124_56946441_56946508_56949386_56949435_56949680_56949768_56949888_56950997_56960774
WTC11_00041712	chr17	-	2484	1	FSM	ENSG00000264112.1	ENST00000582096.1	2483	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTTGTTTTTATTTTT	NA	False	NA	-2	True	ACTAAA	-26	NA	57991521	57989037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57989000_57991500
WTC11_00041713	chr17	-	3778	3	NNC	ENSG00000266086.3	novel	711	3	NA	NA	8748	0	intron_retention	FALSE	canonical	3	141	junction_2	157	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTTGTTTTTATTTTT	-57996494	False	NA	-2	True	ACTAAA	-26	NA	57996505	57989037	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57989797_57990881_57990946_57993550
WTC11_00041720	chr17	-	578	2	FSM	ENSG00000108389.10	ENST00000578259.1	588	2	10	0	10	0	multi-exon	FALSE	canonical	3	105	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGATACCCTCACCTT	NA	False	NA	NA	False	NA	NA	NA	58492728	58491480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58491841_58492510
WTC11_00041725	chr17	-	3227	24	NIC	ENSG00000108395.14	novel	3622	25	NA	NA	43	-6	combination_of_known_junctions	FALSE	canonical	3	43	junction_23	81.9940751236791	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGTGAAGCTGTTTTT	-59106586	False	NA	-3	True	AATAAA	-27	NA	59106621	58982643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
WTC11_00041726	chr17	-	4166	23	NIC	ENSG00000108395.14	novel	4489	24	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	69.6301326431368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59106573	False	NA	-3	True	AATAAA	-16	NA	59106608	58998201	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00041727	chr17	-	4452	24	NIC	ENSG00000108395.14	novel	4489	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	66.8788086560981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099890	True	NA	-3	True	AATAAA	-16	NA	59106816	58998201	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58999460_59001597_59001742_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00041728	chr17	-	4473	25	NIC	ENSG00000108395.14	novel	4489	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	92.548101232098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099890	True	NA	-3	True	AATAAA	-16	NA	59106816	58998201	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59073093_59073142_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00041729	chr17	-	4401	23	NIC	ENSG00000108395.14	novel	4489	24	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	90.421007944426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099890	True	NA	-3	True	AATAAA	-16	NA	59106816	58998201	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58999460_59001597_59001742_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
WTC11_00041742	chr17	-	5980	24	NIC	ENSG00000108506.13	novel	6128	25	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	23.5549472245718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	-61925562	True	NA	1	True	TATAAA	-25	NA	61927942	61865366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_61867727_61867832_61868010_61869033_61869140_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
WTC11_00041747	chr17	-	2800	14	NNC	ENSG00000108604.17	novel	2464	13	NA	NA	74	17405	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	233.258675010075	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTCTCTGGGAAGGT	NA	False	NA	NA	False	AAAAAG	-24	NA	63842991	63814675	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_63814706_63832080_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
WTC11_00041757	chr17	-	964	6	FSM	ENSG00000214174.9	ENST00000686661.1	1046	6	7	75	0	0	multi-exon	FALSE	canonical	3	39	junction_5	82.7946858198037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTAGAACCTTCTTTCA	-64973950	True	NA	-3	True	AATAAA	-29	NA	64975576	64968110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973231_64973518_64974554_64974642_64975559
WTC11_00041763	chr17	-	545	4	FSM	ENSG00000234899.11	ENST00000533996.5	1001	4	456	0	456	0	multi-exon	FALSE	canonical	1	1	junction_1	2.05480466765633	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGTGCAGAGAGGGCAC	NA	False	NA	NA	False	NA	NA	NA	72085045	72076485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72076731_72081920_72082042_72083905_72084029_72084989
WTC11_00041764	chr17	-	2798	10	NIC	ENSG00000133195.12	novel	2732	10	NA	NA	27	-10	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	20.455914656755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGTGGATGACCTGTG	-73090918	True	NA	-28	True	AATAAA	-6	NA	73092649	72645959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092494
WTC11_00041767	chr17	-	1732	6	NIC	ENSG00000109065.12	novel	1860	7	NA	NA	12	-18	combination_of_known_splicesites	FALSE	canonical	1	18	junction_1	101.772294854739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTTGCTTGCCGTGGCTC	-74773136	True	NA	-18	True	TATAAA	-20	NA	74776286	74770546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_74771859_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
WTC11_00041776	chr17	-	1974	11	NIC	ENSG00000161513.12	novel	1846	12	NA	NA	3	3	intron_retention	FALSE	canonical	3	209	junction_3	28.2389801515565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGATGGGGGACTTTT	-74871206	True	NA	0	True	AATAAA	-20	NA	74872991	74862493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
WTC11_00041777	chr17	-	1851	12	NIC	ENSG00000161513.12	novel	1846	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	49	junction_10	66.839514219936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGATGGGGGACTTT	-74871209	True	NA	-1	True	AATAAA	-19	NA	74872994	74862494	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
WTC11_00041781	chr17	-	1315	3	FSM	ENSG00000125458.7	ENST00000583655.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	284	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	-75123260	True	NA	-6	True	AATAAA	-17	NA	75131749	75130227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75130964
WTC11_00041784	chr17	-	287	2	FSM	ENSG00000189159.16	ENST00000481094.1	382	2	95	0	95	0	multi-exon	FALSE	canonical	3	1977	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTTTTTTTTTTTT	-75101895	False	NA	-6	True	ATTAAA	-18	NA	75146685	75135983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75136251_75146665
WTC11_00041798	chr17	-	1401	10	Fusion	ENSG00000092929.12_ENSG00000204316.13	novel	1358	9	NA	NA	0	-342	multi-exon	FALSE	non_canonical	0	0	junction_1	376.215068515042	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCGGCTGGGAGGAGG	-75893543	True	NA	NA	False	NA	NA	NA	75904901	75841135	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_75841161_75898642_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
WTC11_00041807	chr17	-	5407	18	NNC	ENSG00000175931.13	novel	5377	18	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	58.7327534871296	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCCGTTGCCTTTG	-76450715	True	NA	-5	True	ATTAAA	-18	NA	76453212	76389455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397889_76398254_76398325_76398442_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
WTC11_00041808	chr17	-	2969	15	NIC	ENSG00000175931.13	novel	5377	18	NA	NA	-34	-392	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	50.4067131907435	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAAGACTTTTGAAGATA	-76450689	True	NA	NA	False	NA	NA	NA	76453186	76395749	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_76395862_76396127_76396822_76397798_76397892_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
WTC11_00041814	chr17	-	1390	3	FSM	ENSG00000161547.17	ENST00000508921.7	1390	3	0	0	0	0	multi-exon	TRUE	canonical	2	343	junction_2	718.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCACTAGGCGCAG	-76654137	True	NA	NA	False	NA	NA	NA	76737331	76734576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76735159_76736153_76736465_76736834
WTC11_00041828	chr17	-	3084	13	NNC	ENSG00000167281.20	novel	1519	15	NA	NA	-620	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.15386550848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACTCTGTATGCTCTG	NA	False	NA	-4	True	AATAAA	-20	NA	79184092	79089347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79103161_79103255_79104072_79104127_79106650_79106789_79115493_79115749_79183263_79183677_79183928
WTC11_00041829	chr17	-	1908	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	1025	-1465	243	-6	3prime_fragment	FALSE	canonical	3	85	junction_1	15.2212844398888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGACAACTCTGTATGCT	-79096865	True	NA	-7	True	AATAAA	-17	NA	79097483	79089350	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
WTC11_00041849	chr17	-	925	4	NIC	ENSG00000214087.9	novel	1087	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	234.990779960973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674507	True	NA	-45	True	AATAAA	-15	NA	81683749	81681186	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81681880_81682033_81682150_81683535_81683595_81683692
WTC11_00041850	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	262.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	-81674424	True	NA	-59	True	AATAAA	-1	NA	81683666	81681200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81681880_81682033_81682150_81683592
WTC11_00041857	chr17	-	1862	8	NIC	ENSG00000183010.17	novel	1904	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_4	556.400274358418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925374	True	NA	-19	True	ATTAAA	-18	NA	81937296	81932390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935145_81935336_81935517_81936122_81936194_81936747_81936862_81937261
WTC11_00041866	chr17	-	2188	7	FSM	ENSG00000141542.11	ENST00000269347.10	2189	7	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_5	11.4515889242013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGCGACCGGTTCTTT	-82698310	True	NA	-15	True	AATAAA	-26	NA	82698686	82657066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82696388_82696854_82698454
WTC11_00041871	chr17	+	240	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTGTAAAAGAACCCT	31346800	False	NA	NA	False	ATTAAA	-27	NA	31348497	31348737	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_31348500_31348700
WTC11_00041876	chr17_GL000205v2_random	-	7583	3	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	17	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAAAAATCAGTACTT	-139159	True	NA	NA	False	NA	NA	NA	140737	129245	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_136572_138199_138292_140572
WTC11_00041878	chr18	+	2475	5	FSM	ENSG00000263006.7	ENST00000576266.6	2646	5	-8	179	-8	-58	multi-exon	FALSE	canonical	3	9	junction_1	18.0969610708539	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTGTGCTCATTTA	NA	False	NA	-47	True	AATAAA	-20	NA	112089	122161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_112555_116841_116921_117042_117305_118296_118505_120700
WTC11_00041879	chr18	+	560	4	ISM	ENSG00000263006.7	ENST00000576266.6	2646	5	269	4013	269	-177	5prime_fragment	FALSE	canonical	3	9	junction_1	19.3045763140937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTTAGCATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	112366	118327	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_112555_116841_116921_117042_117305_118296
WTC11_00041880	chr18	+	549	3	FSM	ENSG00000263006.7	ENST00000573767.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	3.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGATTTGAAATGCTAA	116828	False	NA	NA	False	AATACA	-15	NA	116841	118504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_116921_117042_117305_118296
WTC11_00041881	chr18	+	5375	15	FSM	ENSG00000101557.15	ENST00000582707.5	1803	15	-50	-3522	-50	284	multi-exon	FALSE	canonical	3	23	junction_3	151.095455704974	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGGACCTAGAAAATGAA	158303	True	NA	NA	False	NA	NA	NA	158332	214913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
WTC11_00041882	chr18	+	2100	14	FSM	ENSG00000101557.15	ENST00000578942.5	3189	14	-162	1251	16	0	multi-exon	FALSE	canonical	3	23	junction_3	156.235711772745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTAGAGGAAGACAC	158383	True	NA	NA	False	AATAAA	-29	NA	158398	211350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210494_211132
WTC11_00041883	chr18	+	1681	15	FSM	ENSG00000101557.15	ENST00000400266.7	1681	15	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_2	154.587551971334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTAGAGGAAGACAC	147370	True	NA	NA	False	AATAAA	-29	NA	158535	211350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
WTC11_00041884	chr18	+	4993	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	-21	0	0	0	multi-exon	FALSE	canonical	3	512	junction_10	46.9545406631658	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	147370	True	NA	10	True	AATAAA	-22	NA	158535	214629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
WTC11_00041886	chr18	+	2100	1	FSM	ENSG00000263884.1	ENST00000581677.1	2131	1	0	31	0	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATACATTAAATTTACAA	267991	True	NA	NA	False	NA	NA	NA	268147	270247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_268100_270200
WTC11_00041887	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	116.514305273358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	651141	True	NA	9	True	ATTAAA	-19	NA	657652	673578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
WTC11_00041888	chr18	+	1329	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	92	-94	92	0	multi-exon	FALSE	canonical	3	30	junction_3	305.469212851312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	657812	True	NA	9	True	ATTAAA	-19	NA	657834	673578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
WTC11_00041889	chr18	+	886	5	FSM	ENSG00000176890.16	ENST00000581920.1	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	306.623955359003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCACAAGCTATTCC	667710	False	NA	36	True	NA	NA	NA	667720	673363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_667753_669071_669174_670691_670868_671379_671452_672859
WTC11_00041890	chr18	+	1136	1	FSM	ENSG00000273355.1	ENST00000610185.1	483	1	-660	7	-660	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGAGCTGTTGCCTTTC	812471	False	NA	2	True	ATTAAA	-10	NA	812613	813749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_812600_813700
WTC11_00041891	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	26.943227349373	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	2567824	True	NA	14	True	AATAAA	-20	NA	2571556	2616635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
WTC11_00041892	chr18	+	8949	48	FSM	ENSG00000101596.17	ENST00000320876.11	8833	48	-116	0	-116	0	multi-exon	TRUE	canonical	3	48	junction_6	29.5495532585825	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCATCAGTTTTCATGTG	2655599	False	NA	19	True	AATAAA	-28	NA	2655609	2805017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627_2688748_2694526_2694694_2697031_2697123_2697830_2698042_2700538_2700660_2700734_2700919_2703691_2703887_2705693_2705808_2706363_2706471_2707562_2707646_2707806_2707921_2718157_2718236_2718314_2718435_2722518_2722664_2724898_2724996_2726451_2726525_2728456_2728597_2729274_2729410_2732264_2732493_2738396_2738546_2739431_2739521_2740702_2740822_2743760_2743929_2747521_2747648_2750042_2750123_2750349_2750508_2751277_2751394_2752487_2752553_2760651_2760740_2762104_2762237_2763636_2763790_2769693_2769821_2769988_2770109_2771532_2771619_2772249_2772373_2775733_2775925_2777805_2777916_2778168_2778240_2784449_2784622_2795948_2796108_2796406_2796522_2802527
WTC11_00041895	chr18	+	5934	8	FSM	ENSG00000132205.11	ENST00000254528.4	5944	8	0	10	0	-10	multi-exon	FALSE	canonical	3	13	junction_3	19.9979590795396	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATTACTTCCTGGTT	2846849	True	NA	25	True	AATAAA	-19	NA	2847005	2915993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2847323_2847808_2847932_2884963_2885140_2890560_2892487_2906782_2907086_2908942_2908976_2909690_2909820_2913066
WTC11_00041896	chr18	+	2049	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	-372	-902	-18	23	multi-exon	FALSE	canonical	3	52	junction_3	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCCAGTTAACTTTTGT	2905622	True	NA	0	True	AATAAA	-11	NA	2906196	2914064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
WTC11_00041897	chr18	+	1053	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	-106	0	-106	0	multi-exon	FALSE	canonical	3	72	junction_1	1729.07920260724	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	NA	False	NA	5	True	ATTAAA	-7	NA	3247374	3256227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
WTC11_00041898	chr18	+	1016	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	-12	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1851.53468439022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	3229342	True	NA	-11	True	AATATA	-40	NA	3247800	3256211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
WTC11_00041899	chr18	+	976	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	-18	0	18	multi-exon	FALSE	canonical	3	3328	junction_1	223.402476858845	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTACCAAACTTGGCTT	3229342	True	NA	32	True	ATTAAA	-34	NA	3247800	3256254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
WTC11_00041901	chr18	+	1232	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	-246	177	-246	0	multi-exon	FALSE	canonical	3	2517	junction_2	103.866367136924	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3261839	False	NA	38	True	AATAAA	-28	NA	3261886	3278284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
WTC11_00041906	chr18	+	3175	3	FSM	ENSG00000177426.22	ENST00000343820.10	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	151.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3439063	True	NA	NA	False	AATATA	-23	NA	3450171	3459978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3450506_3456353_3456581_3457364
WTC11_00041911	chr18	+	2214	2	FSM	ENSG00000177426.22	ENST00000472042.1	2214	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	3455368	False	NA	17	True	AATAAA	-17	NA	3455413	3458411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3456581_3457364
WTC11_00041912	chr18	+	522	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	-20	-52	-20	1	multi-exon	FALSE	canonical	2	3	junction_2	8	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTAGTTACCTTTCCT	3466118	True	NA	4	True	AATAAA	-20	NA	3466229	3478979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3466358_3467126_3467297_3478755
WTC11_00041913	chr18	+	997	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	980	2	0	multi-exon	FALSE	canonical	3	19	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593896	True	NA	3	True	AATAAA	-14	NA	3594102	3597372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3594241_3594419_3594485_3596578
WTC11_00041914	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	3603724	True	NA	NA	False	NA	NA	NA	3603737	3608336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553
WTC11_00041915	chr18	+	832	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-38	9	-38	0	multi-exon	FALSE	canonical	3	118	junction_2	68.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603877	False	NA	8	True	AATAAA	-28	NA	3603889	3610094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553_3606698_3609732
WTC11_00041916	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	5237786	True	NA	NA	False	AATAAA	-19	NA	5237825	5239859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5237800_5239900
WTC11_00041917	chr18	+	4479	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	-18	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	5238004	False	NA	NA	False	NA	NA	NA	5238043	5246875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5239050_5241698_5241890_5243593
WTC11_00041918	chr18	+	9085	1	FSM	ENSG00000263753.9	ENST00000670111.1	9085	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATAAAGTATTTTTTA	5238004	False	NA	NA	False	AGTAAA	-12	NA	5238043	5247128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5238000_5247100
WTC11_00041922	chr18	+	5858	18	FSM	ENSG00000088756.13	ENST00000383472.9	5858	18	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_2	8.21931222339227	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATGAGAATTCTTCT	6728615	True	NA	NA	False	AATAAA	-18	NA	6729715	6915716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6908959_6909025_6912059
WTC11_00041924	chr18	+	3952	25	NNC	ENSG00000173482.17	novel	701	7	NA	NA	13830	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.89249058975543	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGTGAGTGACAATCAT	8063156	False	NA	6	True	ATTAAA	-16	NA	8063193	8406856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_8063225_8069685_8069995_8076454_8076565_8085670_8085873_8088748_8088852_8113485_8113760_8114790_8114828_8143646_8143780_8244057_8244210_8247844_8247920_8253226_8253415_8296367_8296456_8314780_8314858_8319177_8319215_8343422_8343521_8370889_8371007_8376045_8376201_8376461_8376598_8378264_8378415_8379166_8379341_8380295_8380428_8384560_8384687_8387071_8387236_8394475_8394612_8406108
WTC11_00041926	chr18	+	2161	6	FSM	ENSG00000206418.5	ENST00000649141.2	2147	6	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGCCATATTTATT	8603751	True	NA	NA	False	AATAAA	-21	NA	8609422	8639383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8609954_8624937_8624999_8633188_8633328_8635532_8635623_8636252_8636358_8638148
WTC11_00041927	chr18	+	1858	1	NIC	ENSG00000206418.5	novel	2147	6	NA	NA	21	-24252	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGTCAATATTTTAT	8603786	True	NA	NA	False	AATAAA	-19	NA	8609457	8611315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_8609500_8611300
WTC11_00041928	chr18	+	231	2	FSM	ENSG00000206418.5	ENST00000580987.1	504	2	273	0	273	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTTGGACTGTGAAA	8633121	False	NA	NA	False	TTTAAA	-45	NA	8633131	8635567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8633328_8635532
WTC11_00041929	chr18	+	7269	14	NIC	ENSG00000168502.17	novel	5718	14	NA	NA	-418	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	14.0337716085923	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	8703916	True	NA	19	True	AATAAA	-18	NA	8705242	8832778	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_8706714_8718423_8718649_8720337_8720497_8777832_8777893_8783529_8784844_8785935_8786092_8796231_8796463_8798096_8798292_8806892_8807061_8812978_8813234_8818962_8819260_8821466_8821499_8824698_8826233_8831606
WTC11_00041930	chr18	+	474	2	FSM	ENSG00000168502.17	ENST00000523811.2	474	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTTGTTTGTTTGTTTT	8784524	False	NA	NA	False	NA	NA	NA	8784540	8785860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8784844_8785689
WTC11_00041932	chr18	+	727	1	FSM	ENSG00000272788.1	ENST00000609424.1	650	1	-87	10	-87	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTCTATTTTGTGACT	8801556	False	NA	-2	True	AATAAA	-11	NA	8801568	8802295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8801600_8802300
WTC11_00041934	chr18	+	1007	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	-86	-53	-21	53	multi-exon	FALSE	canonical	3	25	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCATTTTTGAGGCTG	9082219	True	NA	NA	False	NA	NA	NA	9102608	9103909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9102798_9103091
WTC11_00041935	chr18	+	875	2	FSM	ENSG00000178127.13	ENST00000577703.1	854	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTTTATTTGTGGTAA	9082219	True	NA	NA	False	NA	NA	NA	9102608	9117887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9103434_9117837
WTC11_00041936	chr18	+	861	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	-4	0	0	0	multi-exon	FALSE	canonical	3	3359	junction_2	229.953056433841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	9082305	True	NA	28	True	AATAAA	-25	NA	9102694	9134341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
WTC11_00041939	chr18	+	7333	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-7	25628	-7	4246	5prime_fragment	FALSE	canonical	3	29	junction_3	31.2307440673449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTACAAAAATAAAAAATAA	9128471	True	NA	-26	True	NA	NA	NA	9136773	9260357	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
WTC11_00041940	chr18	+	10457	13	FSM	ENSG00000101745.17	ENST00000262126.9	11284	13	-7	834	-7	-834	multi-exon	FALSE	canonical	3	29	junction_3	31.1510656140185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGAGATCGTGCCACT	9128471	True	NA	NA	False	NA	NA	NA	9136773	9285151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210_9258932_9263789_9263889_9275523_9275668_9279548_9279645_9280940
WTC11_00041944	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	10.3531396204243	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	9330631	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
WTC11_00041946	chr18	+	4367	10	FSM	ENSG00000017797.13	ENST00000019317.8	4368	10	0	1	0	-1	multi-exon	FALSE	canonical	2	26	junction_1	145.072225519856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGACTTCTCTGTTTT	9474795	True	NA	16	True	ATTAAA	-27	NA	9475008	9538113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475177_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
WTC11_00041947	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	32.1527987760911	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	9471307	True	NA	17	True	ATTAAA	-28	NA	9475512	9538114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
WTC11_00041948	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	51	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	9475544	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475692_9512990_9513290_9516844
WTC11_00041950	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.619420637395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	9706767	True	NA	NA	False	NA	NA	NA	9708274	9859469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
WTC11_00041951	chr18	+	475	5	FSM	ENSG00000168461.13	ENST00000581109.1	469	5	-6	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	139.252244147087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCCAACCATGCAAGC	9706793	True	NA	NA	False	NA	NA	NA	9708300	9859286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9845581_9845692_9859227
WTC11_00041952	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	31.6842056692114	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	9706793	True	NA	18	True	AATAAA	-15	NA	9708300	9862551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
WTC11_00041953	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	85.6434469180217	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	9891046	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
WTC11_00041954	chr18	+	1237	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	-10	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	629.02907987893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	9891082	True	NA	NA	False	NA	NA	NA	9914051	9954358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
WTC11_00041956	chr18	+	3864	5	FSM	ENSG00000154856.13	ENST00000355285.10	3803	5	-61	0	-61	0	multi-exon	FALSE	canonical	3	30	junction_4	2.73861278752583	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGCTGAAGAATACCT	10454542	False	NA	NA	False	AATAAA	-19	NA	10454573	10489949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10455040_10468468_10468653_10471529_10472062_10485461_10485784_10487589
WTC11_00041958	chr18	+	3496	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	-20	-1960	-20	0	multi-exon	TRUE	canonical	2	8	junction_1	82.6161520008562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGTTCTTTGTA	NA	False	NA	6	True	AATAAA	-15	NA	10525884	10552761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
WTC11_00041959	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	18.1121392103986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	10523397	True	NA	9	True	AATAAA	-18	NA	10526026	10552764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
WTC11_00041962	chr18	+	6227	12	FSM	ENSG00000141404.17	ENST00000334049.11	6227	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.078815837558	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11688600	True	NA	28	True	AATAAA	-23	NA	11689263	11885685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
WTC11_00041964	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4618631588204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11751996	True	NA	28	True	AATAAA	-23	NA	11752084	11885685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
WTC11_00041965	chr18	+	3054	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	11848836	True	NA	9	True	ATTAAA	-16	NA	11851390	11854444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11851400_11854400
WTC11_00041967	chr18	+	664	6	FSM	ENSG00000141401.12	ENST00000588752.5	651	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	23	junction_1	306.945337153051	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGCGGCTGCTGCATG	11980762	True	NA	NA	False	NA	NA	NA	11981011	12028118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981206_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042
WTC11_00041969	chr18	+	1638	8	FSM	ENSG00000141401.12	ENST00000590107.5	1616	8	-22	0	15	0	multi-exon	FALSE	canonical	1	4	junction_4	295.690820325031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGCCCTGTGTGTAT	11974162	True	NA	14	True	AATAAA	-5	NA	11981442	12030868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012350_12014264_12014374_12028042_12028152_12028841_12028994_12030342
WTC11_00041970	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	54.8020556742395	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11974226	True	NA	23	True	AATAAA	-14	NA	11981506	12030877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
WTC11_00041972	chr18	+	919	2	FSM	ENSG00000141401.12	ENST00000589374.1	919	2	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTGTATCTGTTTC	12028565	False	NA	21	True	AATAAA	-12	NA	12028607	12030875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12028994_12030342
WTC11_00041974	chr18	+	1032	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	-31	7	-31	-5	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAGATGTGTGACACT	NA	False	NA	NA	False	AATAAA	-17	NA	12254329	12277588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
WTC11_00041975	chr18	+	4397	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	-2620	-702	-2057	0	multi-exon	FALSE	canonical	3	50	junction_2	538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	NA	False	NA	34	True	CATAAA	-26	NA	12305611	12326616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12325066
WTC11_00041976	chr18	+	4885	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	-2642	-1455	-2070	106	multi-exon	FALSE	canonical	3	30	junction_3	506.386106532248	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCAGCCAAAACTGTTGC	NA	False	NA	NA	False	TTTAAA	-15	NA	12305598	12326722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
WTC11_00041978	chr18	+	2172	3	FSM	ENSG00000176014.13	ENST00000417736.2	2163	3	-9	0	0	0	multi-exon	FALSE	canonical	3	937	junction_2	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	12289064	True	NA	8	True	AATAAA	-15	NA	12308231	12326563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308796_12310942_12311054_12325066
WTC11_00041979	chr18	+	1888	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	-9	0	0	0	multi-exon	FALSE	canonical	3	937	junction_3	80.6101730552664	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	12289064	True	NA	34	True	CATAAA	-26	NA	12308231	12326616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
WTC11_00041980	chr18	+	1019	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	-2	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	488.01388869125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	12289064	True	NA	22	True	ATTAAA	-18	NA	12308231	12329826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
WTC11_00041981	chr18	+	1689	7	FSM	ENSG00000141391.14	ENST00000440960.6	1684	7	-5	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_1	9.04924797366549	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCGTTTCGTGTCTGTC	12407610	True	NA	NA	False	ATTAAA	-22	NA	12407923	12432234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12408008_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
WTC11_00041982	chr18	+	2001	6	FSM	ENSG00000141391.14	ENST00000592149.5	2001	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	5.62138772902208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419932	12432238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
WTC11_00041983	chr18	+	487	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATTCATTTGTAACATT	12657896	True	NA	NA	False	TATAAA	-39	NA	12658176	12658893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12658344_12658573
WTC11_00041984	chr18	+	269	3	FSM	ENSG00000128789.21	ENST00000585853.2	377	3	108	0	-42	0	multi-exon	FALSE	canonical	2	2	junction_1	9	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCCAGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	12658150	12663471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12658206_12658573_12658774_12663457
WTC11_00041985	chr18	+	1155	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	-16	-103	-16	103	multi-exon	FALSE	canonical	3	559	junction_5	22.0036360631601	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACTGTAGCTATTGAAT	12692792	True	NA	NA	False	AGTAAA	-18	NA	12703006	12724971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
WTC11_00041986	chr18	+	1089	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	-19	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	20.0866179886566	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	12692808	True	NA	18	True	AATAAA	-19	NA	12703022	12725740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
WTC11_00041988	chr18	+	659	1	FSM	ENSG00000267570.1	ENST00000585406.1	838	1	-35	214	-35	-214	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGCGCGCCCAGTTCCT	12911066	True	NA	NA	False	NA	NA	NA	12911150	12911809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12911200_12911800
WTC11_00041990	chr18	+	3505	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	750	junction_3	43.0985426087704	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	12937457	True	NA	21	True	AATAAA	-32	NA	12947983	12987536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
WTC11_00041994	chr18	+	4560	4	FSM	ENSG00000085415.16	ENST00000590843.1	5206	4	646	0	646	0	multi-exon	FALSE	canonical	3	768	junction_3	33.8657480190367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	NA	False	NA	16	True	AATAAA	-27	NA	12976933	12987531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12978893_12982517_12982676_12984039_12984191_12985239
WTC11_00041995	chr18	+	7931	45	NNC	ENSG00000101639.19	novel	7960	45	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	20.076352192452	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGTGGTATATCCAG	12989116	True	NA	3	True	AATAAA	-12	NA	12991361	13125030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012998_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116373_13116504_13117584_13117644_13124631
WTC11_00041996	chr18	+	7960	45	FSM	ENSG00000101639.19	ENST00000506447.5	7960	45	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	18.5691136964335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTATATCCAGAAATTT	12989116	True	NA	9	True	AATAAA	-18	NA	12991361	13125036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116376_13116504_13117584_13117644_13124631
WTC11_00042001	chr18	+	6256	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	-21	1	-8	0	multi-exon	FALSE	canonical	3	48	junction_1	27.2509003566476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTGGTTCATTTA	13721485	True	NA	12	True	AATAAA	-19	NA	13726651	13764555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
WTC11_00042003	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	34.9729529496228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721537	True	NA	13	True	AATAAA	-20	NA	13726703	13764556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
WTC11_00042006	chr18	+	1571	1	FSM	ENSG00000267150.1	ENST00000591211.1	1085	1	-419	-67	-419	67	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCATTGAAAAATAAAAACA	NA	False	NA	NA	False	NA	NA	NA	14089515	14091086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14089500_14091100
WTC11_00042008	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	5573	junction_3	265.557275680157	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	21554396	True	NA	17	True	AATAAA	-14	NA	21612313	21633520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
WTC11_00042009	chr18	+	10122	21	FSM	ENSG00000101752.12	ENST00000261537.7	10100	21	-22	0	-22	0	multi-exon	FALSE	canonical	3	50	junction_1	12.1466044637997	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTATATTTTTCATC	NA	False	NA	7	True	AATAAA	-15	NA	21740769	21870953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21741813_21765771_21765944_21768622_21768753_21773623_21773729_21778102_21778170_21779480_21779686_21791373_21791558_21798083_21798229_21799840_21799975_21803906_21804015_21815615_21815814_21819494_21819647_21838364_21838498_21843130_21843218_21844091_21844254_21846943_21847126_21849195_21849389_21853139_21853219_21857129_21857244_21858545_21858647_21864525
WTC11_00042010	chr18	+	1018	1	FSM	ENSG00000199977.1	ENST00000363107.1	205	1	-436	-377	-436	377	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCTCACCTCTAGAGAT	21817159	False	NA	NA	False	NA	NA	NA	21817187	21818205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21817200_21818200
WTC11_00042011	chr18	+	3284	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	-9	0	-9	0	multi-exon	FALSE	canonical	3	169	junction_8	26.6149962369217	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	NA	False	NA	15	True	AATACA	-16	NA	22933318	23026486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
WTC11_00042013	chr18	+	3307	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	-14	0	14	multi-exon	FALSE	canonical	3	36	junction_1	46.7478130471507	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGCCTTTCAGTTCTT	22930883	False	NA	31	True	AATACA	-32	NA	22933825	23026502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
WTC11_00042018	chr18	+	5283	10	FSM	ENSG00000134508.13	ENST00000256925.12	5283	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.44557811326349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTTCTTTATCTC	23134177	True	NA	16	True	AATAAA	-17	NA	23135484	23260470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
WTC11_00042019	chr18	+	2705	11	NNC	ENSG00000134508.13	novel	5283	10	NA	NA	-290	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	22.5335305711289	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATACCTGTATGCGTTT	23136118	False	NA	6	True	ATTAAA	-14	NA	23136133	23258648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_23136417_23136523_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
WTC11_00042021	chr18	+	3586	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	-12	0	-12	0	multi-exon	TRUE	canonical	3	98	junction_5	10.2479672781159	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	23451947	True	NA	19	True	ATTAAA	-21	NA	23453274	23483140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
WTC11_00042025	chr18	+	2210	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	-10	0	-10	0	multi-exon	FALSE	non_canonical	3	80	junction_18	14.1646432751966	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	23502104	True	NA	NA	False	TATAAA	-42	NA	23503500	23531822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
WTC11_00042026	chr18	+	2018	20	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	3	0	combination_of_known_junctions	FALSE	non_canonical	3	10	junction_18	24.2899156029822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATGTTATAAAGTGTA	23502126	True	NA	NA	False	AATAAA	-13	NA	23503522	23531776	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530510_23530613_23531624
WTC11_00042030	chr18	+	808	4	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	51791	1	159	-1	3prime_fragment	FALSE	canonical	1	4	junction_3	1.69967317119759	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAGAATATGAAACTT	23950041	False	NA	NA	False	ATTAAA	-14	NA	23950051	23954988	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_23950160_23951683_23951778_23952989_23953110_23954502
WTC11_00042031	chr18	+	1369	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	-324	3	-324	0	multi-exon	FALSE	canonical	3	176	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	NA	False	NA	4	True	ATTAAA	-15	NA	24014095	24020285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24019859
WTC11_00042032	chr18	+	6055	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	-658	-501	-324	491	multi-exon	TRUE	canonical	3	55	junction_10	8.29842788276453	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACACACACCTTTGCTG	NA	False	NA	NA	False	TTTAAA	-43	NA	24014095	24136101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
WTC11_00042033	chr18	+	499	4	FSM	ENSG00000168234.13	ENST00000578150.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.8870119584549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTTGGATATGGCCTT	24014889	False	NA	NA	False	NA	NA	NA	24014912	24080779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24080584
WTC11_00042035	chr18	+	1374	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	-72	3	3	0	multi-exon	FALSE	canonical	3	22	junction_4	13.4669966956259	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137444	True	NA	23	True	AATAAA	-13	NA	24138989	24161597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
WTC11_00042036	chr18	+	2259	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	-33	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.79795897113271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137516	True	NA	23	True	AATAAA	-13	NA	24139061	24161597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
WTC11_00042037	chr18	+	3751	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	-17	0	6	0	multi-exon	FALSE	canonical	3	267	junction_1	14.7461859475595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	24422395	True	NA	9	True	AATAAA	-20	NA	24426652	24453531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
WTC11_00042038	chr18	+	4930	10	FSM	ENSG00000154059.11	ENST00000580706.1	2948	10	-68	-1914	-55	0	multi-exon	FALSE	canonical	3	267	junction_7	13.7741930820549	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	NA	False	NA	-12	True	NA	NA	NA	24426578	24453510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
WTC11_00042039	chr18	+	4751	15	FSM	ENSG00000141384.13	ENST00000269142.10	4751	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.442520907381	4351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGCTCATTCACTGA	26223941	True	NA	NA	False	ATTAAA	-22	NA	26226444	26391685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425_26293532_26315228_26315399_26321069_26321201_26327014_26327141_26335174_26335232_26357689_26357795_26389844
WTC11_00042041	chr18	+	832	1	FSM	ENSG00000263846.1	ENST00000584883.1	931	1	-46	145	-46	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATGAGCTCCCAGCCC	NA	False	NA	NA	False	AAAAAG	-13	NA	26599361	26600193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_26599400_26600200
WTC11_00042042	chr18	+	5778	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	-229	148	-229	-148	multi-exon	FALSE	canonical	3	483	junction_7	48.3121229557323	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTTTTATTTCTCTA	NA	False	NA	30	True	AATAAA	-27	NA	31497947	31548860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
WTC11_00042044	chr18	+	3910	1	FSM	ENSG00000259985.1	ENST00000565978.1	1169	1	-1353	-1388	-1353	1388	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAATGGAATATTTATA	NA	False	NA	NA	False	TATAAA	-17	NA	31684301	31688211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31684300_31688200
WTC11_00042045	chr18	+	1582	1	FSM	ENSG00000263823.1	ENST00000580420.1	1582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAATGTCTCAAATTTTT	31942557	False	NA	5	True	ATTAAA	-15	NA	31942574	31944156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31942600_31944200
WTC11_00042046	chr18	+	5833	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	-282	22	-282	-22	multi-exon	FALSE	canonical	3	31	junction_4	12.6712272491657	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTATTCTTAAACATT	32018520	False	NA	20	True	AATAAA	-37	NA	32018542	32073197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
WTC11_00042047	chr18	+	1010	5	NNC	ENSG00000263917.1	novel	565	5	NA	NA	-235	-23646	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	22.1852991866236	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACTGGAACCAAATTGG	32017232	True	NA	NA	False	AATAAA	-8	NA	32018593	32088133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32087897
WTC11_00042049	chr18	+	632	3	FSM	ENSG00000134758.14	ENST00000585103.5	608	3	-24	0	-14	0	multi-exon	FALSE	canonical	2	4	junction_2	190.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCATTCCAAACTTTCA	32084704	True	NA	NA	False	NA	NA	NA	32091859	32113813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32092236_32092699_32092887_32113744
WTC11_00042050	chr18	+	3565	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	385	junction_1	63.9639566873567	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32084704	True	NA	10	True	ATTAAA	-16	NA	32091859	32131561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
WTC11_00042052	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	229.18224189496	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32090338	True	NA	7	True	AATAAA	-15	NA	32092689	32130715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
WTC11_00042054	chr18	+	6133	21	NIC	ENSG00000134769.23	novel	5888	22	NA	NA	-63	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_20	12.6071408336704	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGTGGTTTATTCC	NA	False	NA	12	True	ATTAAA	-21	NA	34493227	34891402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34887765
WTC11_00042055	chr18	+	1663	12	NIC	ENSG00000134769.23	novel	1706	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	7.8886884181515	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	34492169	True	NA	10	True	AATAAA	-20	NA	34493350	34829328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34829040
WTC11_00042056	chr18	+	4223	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	-15	4	-6	0	multi-exon	FALSE	canonical	3	316	junction_3	24.9844396019247	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGCCTGGAGTTACA	35038184	True	NA	13	True	AATAAA	-17	NA	35041397	35143466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
WTC11_00042058	chr18	+	2065	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	-19	0	1	0	multi-exon	FALSE	canonical	3	13	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	35236489	True	NA	-28	True	NA	NA	NA	35241037	35244069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241691_35242390_35242885_35243151
WTC11_00042059	chr18	+	1523	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	-7	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	NA	False	NA	3	True	ATTAAA	-17	NA	35241029	35244100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241110_35242390_35242885_35243151
WTC11_00042060	chr18	+	5836	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.0369800568452	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	35236489	True	NA	NA	False	ATTAAA	-18	NA	35241037	35249808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
WTC11_00042061	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	77	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	35287642	True	NA	17	True	AATAAA	-17	NA	35290281	35310766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35290392_35291009_35291233_35305975
WTC11_00042062	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	35287696	True	NA	NA	False	NA	NA	NA	35290335	35308110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35290392_35305975
WTC11_00042063	chr18	+	5648	2	FSM	ENSG00000257267.4	ENST00000639141.1	1865	2	0	-3783	0	8	multi-exon	FALSE	canonical	3	329	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGTTGAAGAGGGGTG	35287744	True	NA	25	True	AATAAA	-25	NA	35290383	35310774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35291233_35305975
WTC11_00042064	chr18	+	3970	12	FSM	ENSG00000141429.14	ENST00000269195.6	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	85.9333780003175	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	35581641	False	NA	29	True	ATTAAA	-42	NA	35581739	35711834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35581863_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
WTC11_00042065	chr18	+	1337	1	FSM	ENSG00000278986.1	ENST00000623524.1	1766	1	468	-39	468	39	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTGAAAGTCCTTTAA	35968924	True	NA	NA	False	NA	NA	NA	35972618	35973955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972600_35974000
WTC11_00042067	chr18	+	1631	4	FSM	ENSG00000141428.17	ENST00000610527.4	1059	4	-580	8	-580	0	multi-exon	TRUE	canonical	3	47	junction_1	137.211110661232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	NA	False	NA	8	True	TATAAA	-19	NA	35972044	35979278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
WTC11_00042068	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	30.1122898498271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35968984	True	NA	8	True	TATAAA	-19	NA	35972678	35979278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
WTC11_00042069	chr18	+	951	4	NIC	ENSG00000141428.17	novel	985	5	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	158.293679244905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35968995	True	NA	8	True	TATAAA	-19	NA	35972689	35979278	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_35972806_35974895_35975096_35977409_35977601_35978834
WTC11_00042074	chr18	+	2740	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	-18	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	157.084128904606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	36123855	True	NA	17	True	AATAAA	-23	NA	36129879	36174651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
WTC11_00042075	chr18	+	2563	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	-21	0	0	0	multi-exon	FALSE	canonical	2	25	junction_18	121.659015694577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	36123855	True	NA	27	True	NA	NA	NA	36129879	36174721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
WTC11_00042076	chr18	+	8451	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	-19	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	49.7146962216221	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	36123855	True	NA	8	True	AATAAA	-22	NA	36129879	36180557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
WTC11_00042079	chr18	+	674	4	FSM	ENSG00000134759.14	ENST00000541748.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	53.3916348004691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTTGCAGTCACTG	36166947	False	NA	19	True	AATAAA	-25	NA	36166965	36174653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36167223_36170062_36170197_36171046_36171161_36174484
WTC11_00042080	chr18	+	7472	3	FSM	ENSG00000134759.14	ENST00000536830.1	636	3	-1008	-5828	-1008	16	multi-exon	FALSE	canonical	3	599	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCAAGTATTCTTTTTT	36168910	False	NA	24	True	AATAAA	-38	NA	36168927	36180573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36170197_36171046_36171161_36174484
WTC11_00042082	chr18	+	3011	1	FSM	ENSG00000274849.1	ENST00000612081.1	449	1	-2315	-247	-2315	247	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGATCACTTGAGCCCA	36185737	True	NA	NA	False	NA	NA	NA	36187508	36190519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36187500_36190500
WTC11_00042083	chr18	+	6196	15	FSM	ENSG00000075643.6	ENST00000261326.6	6182	15	-14	0	-14	0	multi-exon	FALSE	canonical	3	17	junction_4	6.61669194121186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAATTTTCTTTGCTTTG	36185711	True	NA	18	True	ATTAAA	-19	NA	36187482	36272157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36187682_36195256_36195347_36198689_36198757_36199682_36200325_36203112_36203190_36205076_36205277_36213365_36213483_36215515_36215978_36220054_36220218_36248921_36249001_36251158_36251284_36256967_36257074_36260036_36260176_36266748_36266854_36268532
WTC11_00042084	chr18	+	1042	2	NNC	ENSG00000075643.6	novel	6182	15	NA	NA	5	-72486	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGATAAGTGAATGAAT	36185730	True	NA	24	True	AATAAA	-37	NA	36187501	36194328	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_36187682_36193466
WTC11_00042085	chr18	+	652	3	FSM	ENSG00000134775.16	ENST00000587493.1	885	3	233	0	233	0	multi-exon	FALSE	canonical	3	7	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAGGACCCAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	36693208	36717971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36693424_36709094_36709392_36717831
WTC11_00042086	chr18	+	1327	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	-9	-128	-7	128	multi-exon	FALSE	canonical	3	34	junction_3	2.8613807855649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAGCATTATTTGTAAG	36827553	True	NA	NA	False	NA	NA	NA	36829119	36886532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
WTC11_00042087	chr18	+	365	2	FSM	ENSG00000150477.15	ENST00000599493.1	507	2	0	142	0	-142	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACGTTTGGTATACTTT	NA	False	NA	NA	False	CATAAA	-7	NA	37067339	37084283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_37067546_37084124
WTC11_00042088	chr18	+	3018	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	-37	6434	-37	0	multi-exon	TRUE	canonical	3	93	junction_11	17.5639703813106	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCTTATTTATGTAC	41952051	True	NA	13	True	AATAAA	-13	NA	41955196	42081396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
WTC11_00042089	chr18	+	235	1	FSM	ENSG00000276174.1	ENST00000611384.1	326	1	-136	227	-136	-227	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCATTGTATATTTTGA	NA	False	NA	NA	False	TTTAAA	-25	NA	42052568	42052803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_42052600_42052800
WTC11_00042091	chr18	+	528	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	-22	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	438.021734620555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	46095970	True	NA	68	True	AATAAA	-40	NA	46104379	46128179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
WTC11_00042092	chr18	+	1115	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	-46	3	-39	0	multi-exon	FALSE	canonical	3	983	junction_4	64.3229158232119	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	46095929	True	NA	22	True	ATTAAA	-13	NA	46104338	46128330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
WTC11_00042093	chr18	+	1157	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	-57	-2	-39	0	multi-exon	FALSE	canonical	3	14	junction_2	365.02754604961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTTTCTGTGTGGTTG	46095929	True	NA	24	True	ATTAAA	-15	NA	46104338	46128332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
WTC11_00042098	chr18	+	5136	4	NIC	ENSG00000152242.11	novel	586	3	NA	NA	-24	-15	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	53.5599352750418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGAGTGTATTTAAACA	46172769	True	NA	2	True	CATAAA	-26	NA	46173528	46266968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_46173713_46215810_46216596_46253696_46253824_46262928
WTC11_00042099	chr18	+	5477	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	-213	0	-198	0	multi-exon	FALSE	canonical	3	116	junction_1	14.522013940528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	46173786	False	NA	17	True	AATAAA	-14	NA	46173820	46266983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
WTC11_00042100	chr18	+	3751	2	FSM	ENSG00000152242.11	ENST00000619230.1	3744	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	116	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCGGCACTAGATCAT	46173977	False	NA	NA	False	TTTAAA	-26	NA	46174011	46219242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46174331_46215810
WTC11_00042101	chr18	+	5478	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	-22	0	-7	0	multi-exon	FALSE	canonical	3	21	junction_2	54.8497948947852	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	46173977	False	NA	26	True	AATAAA	-23	NA	46174011	46266992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
WTC11_00042102	chr18	+	3263	1	FSM	ENSG00000141622.14	ENST00000588679.1	2904	1	289	-648	289	128	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGAATGCCTTTTCTT	46334491	False	NA	NA	False	NA	NA	NA	46334512	46337775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46334500_46337800
WTC11_00042103	chr18	+	425	4	FSM	ENSG00000141622.14	ENST00000592777.1	541	4	116	0	116	0	multi-exon	FALSE	canonical	1	3	junction_3	0.471404520791032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGATGTGAGGTAGGAG	NA	False	NA	NA	False	NA	NA	NA	46447562	46456067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46447693_46450295_46450401_46450703_46450800_46455973
WTC11_00042104	chr18	+	679	1	FSM	ENSG00000270112.4	ENST00000624895.1	4685	1	1447	2559	1447	1505	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATATCTCCAAGCTGAG	46761160	False	NA	NA	False	NA	NA	NA	46761170	46761849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46761200_46761800
WTC11_00042105	chr18	+	3455	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	10	-2323	10	2127	multi-exon	FALSE	canonical	3	122	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACACCACTATGTTTTG	46863560	False	NA	-5	True	AATAAA	-8	NA	46868656	46877890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46868991_46874769
WTC11_00042106	chr18	+	865	8	FSM	ENSG00000167216.19	ENST00000585469.5	865	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.6816559150582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATCTGATATTCAATT	46946546	True	NA	NA	False	NA	NA	NA	46946796	47063361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46946924_47046390_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283
WTC11_00042107	chr18	+	2403	1	FSM	ENSG00000267724.1	ENST00000591183.1	2117	1	-286	0	-286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGTCATCTCTGGCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	47105659	47108062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_47105700_47108100
WTC11_00042108	chr18	+	273	1	FSM	ENSG00000267800.1	ENST00000588843.1	273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGTCTAGCGAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	47137017	47137290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_47137000_47137300
WTC11_00042109	chr18	+	621	1	FSM	ENSG00000267156.1	ENST00000592307.1	737	1	43	73	43	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGAAGAATGACATAAAA	NA	False	NA	NA	False	AATATA	-24	NA	47630154	47630775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_47630200_47630800
WTC11_00042110	chr18	+	4409	13	FSM	ENSG00000134030.14	ENST00000382998.8	4407	13	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	8.03983139679489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	48538802	True	NA	14	True	TATAAA	-45	NA	48539155	48861906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48539313_48539757_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758412_48761389_48761690_48817220_48817377_48857587_48857642_48859343
WTC11_00042111	chr18	+	5724	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	41	0	41	0	multi-exon	FALSE	canonical	2	8	junction_1	6.20849857416868	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	48539029	False	NA	NA	False	AATAAA	-21	NA	48539071	48863217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
WTC11_00042112	chr18	+	4241	4	FSM	ENSG00000134030.14	ENST00000587860.1	2940	4	40	-1341	40	0	multi-exon	FALSE	canonical	3	22	junction_1	2.49443825784929	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	NA	False	NA	14	True	TATAAA	-45	NA	48760221	48861906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48761690_48817220_48817377_48857587_48857642_48859343
WTC11_00042113	chr18	+	952	3	FSM	ENSG00000134030.14	ENST00000592658.1	952	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCCACTGCCTGTCAG	NA	False	NA	NA	False	NA	NA	NA	48859881	48862355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48860430_48861216_48861293_48862027
WTC11_00042114	chr18	+	412	2	FSM	ENSG00000134030.14	ENST00000590422.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAATGCCCAGAGTC	NA	False	NA	NA	False	AATAAA	-12	NA	48862543	48863208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48862626_48862878
WTC11_00042115	chr18	+	505	3	FSM	ENSG00000101670.12	ENST00000583083.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTCAGCCCTGCACACA	49561136	False	NA	NA	False	NA	NA	NA	49561171	49567475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_49561461_49565316_49565499_49567441
WTC11_00042118	chr18	+	236	1	FSM	ENSG00000267322.3	ENST00000617833.1	660	1	83	341	83	-341	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCCATTTAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	49839949	49840185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_49839900_49840200
WTC11_00042119	chr18	+	2968	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	-68	-1921	-68	0	multi-exon	FALSE	canonical	3	58	junction_1	28.487814158962	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50374971	50394168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
WTC11_00042120	chr18	+	2805	6	FSM	ENSG00000154839.10	ENST00000494518.1	746	6	-44	-2015	-23	7	multi-exon	FALSE	canonical	3	8	junction_2	51.4042799774493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGAGTTCTGTATT	NA	False	NA	21	True	AATAAA	-21	NA	50375016	50394175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50375240_50375819_50375919_50382128_50382227_50385215_50385354_50391123_50391294_50392098
WTC11_00042123	chr18	+	2879	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	-30	0	-24	0	multi-exon	FALSE	canonical	3	87	junction_1	20.0783188760635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50375015	50394168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
WTC11_00042124	chr18	+	2688	6	NIC	ENSG00000154839.10	novel	2849	7	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	48.9301543018209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGCATTTCCCTGAGT	50374259	True	NA	13	True	AATAAA	-13	NA	50375080	50394167	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_50375195_50375819_50375919_50382128_50382227_50385215_50385354_50391123_50391294_50392098
WTC11_00042125	chr18	+	4771	6	FSM	ENSG00000141639.12	ENST00000400384.7	4763	6	-13	5	-13	-3	multi-exon	FALSE	canonical	3	11	junction_4	3.87814388593306	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTTATTTATGTATTA	50560060	False	NA	NA	False	AATAAA	-14	NA	50560073	50731821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50560244_50663088_50664505_50715078_50715224_50721937_50722100_50725961_50726176_50729157
WTC11_00042126	chr18	+	2426	14	FSM	ENSG00000082212.13	ENST00000640530.1	2426	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	107.144320080179	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAACCTTTTTATTTAA	50873899	True	NA	-24	True	AATAAA	-33	NA	50879079	50947852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
WTC11_00042127	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	24.2224872564501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	50873937	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
WTC11_00042129	chr18	+	1471	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	-5	39	0	-39	multi-exon	FALSE	canonical	3	14	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAAGTTTTTCAGAAT	50967415	True	NA	NA	False	NA	NA	NA	50968039	50969827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50968115_50968431
WTC11_00042130	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.4821855949366	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	50967366	True	NA	NA	False	NA	NA	NA	50967990	50986946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
WTC11_00042131	chr18	+	2250	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	-2	-37	-2	37	multi-exon	FALSE	canonical	3	34	junction_2	6.16441400296898	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGATTCACTCAGAGG	50967413	True	NA	42	True	AAAACA	-24	NA	50968037	50988158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
WTC11_00042132	chr18	+	8791	12	FSM	ENSG00000141646.15	ENST00000342988.8	8772	12	-20	1	-20	-1	multi-exon	FALSE	canonical	3	351	junction_1	22.4016675884587	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTATGTGCTCATTCTT	51022900	True	NA	15	True	ATTAAA	-17	NA	51030192	51085041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_51030624_51046919_51047296_51048685_51048861_51049294_51049325_51054780_51054994_51058124_51058245_51058339_51058457_51059865_51059917_51065422_51065607_51067018_51067188_51076637_51076777_51078255
WTC11_00042135	chr18	+	2031	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	-1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_4	119.534513844329	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	54265322	True	NA	NA	False	CATAAA	-20	NA	54269517	54294483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
WTC11_00042136	chr18	+	6038	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	-18	0	-18	0	multi-exon	FALSE	canonical	3	238	junction_1	40.4340646021015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	54265303	True	NA	9	True	AATAAA	-14	NA	54269498	54298234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
WTC11_00042139	chr18	+	1204	6	FSM	ENSG00000101751.11	ENST00000583136.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	126.724898895205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATTTTAGAAAAAGAA	54265389	True	NA	NA	False	NA	NA	NA	54269584	54282911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
WTC11_00042141	chr18	+	577	4	FSM	ENSG00000101751.11	ENST00000580880.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	159.343095935225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTCAACATCTTATT	54272154	False	NA	NA	False	TTTAAA	-29	NA	54272169	54280852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54272243_54273925_54274091_54277702_54277856_54280666
WTC11_00042150	chr18	+	5862	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	-579	-3187	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	69.6047148297485	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	54347191	True	NA	24	True	TATAAA	-38	NA	54357902	54382032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
WTC11_00042151	chr18	+	6402	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	-682	-1664	-3	0	multi-exon	FALSE	canonical	3	98	junction_3	37.6406206979988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	54347191	True	NA	24	True	TATAAA	-38	NA	54357902	54382032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
WTC11_00042152	chr18	+	6050	9	NNC	ENSG00000166845.15	novel	5703	9	NA	NA	211	-25	intron_retention	FALSE	canonical	3	10	junction_2	65.8975293542937	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGAGACCACATTCT	54358113	True	NA	-1	True	TATAAA	-13	NA	54358127	54382007	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_54358871_54360526_54360655_54360756_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
WTC11_00042153	chr18	+	6077	8	FSM	ENSG00000166845.15	ENST00000300091.5	5237	8	-682	-158	-3	156	multi-exon	FALSE	canonical	3	61	junction_3	49.342617254773	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCAACCTCCCGTTTTC	54347191	True	NA	NA	False	CATAAA	-17	NA	54357902	54382190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54358871_54360526_54360856_54361642_54361949_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
WTC11_00042154	chr18	+	518	3	FSM	ENSG00000267327.2	ENST00000589440.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAATTTCTCTGCATC	55892360	True	NA	NA	False	NA	NA	NA	55893037	56023462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_55893443_56017727_56017780_56023401
WTC11_00042155	chr18	+	1550	1	Genic_Genomic	ENSG00000267327.2	novel	NA	NA	NA	NA	26213	19	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGTCTTTTGTCTTAA	NA	False	NA	10	True	AATAAA	-24	NA	56024551	56026101	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr18_+_56024600_56026100
WTC11_00042156	chr18	+	1190	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTATCCACCCCATGGT	56417537	False	NA	NA	False	NA	NA	NA	56417566	56418756	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_56417600_56418800
WTC11_00042157	chr18	+	402	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCGTTGTTCCTGGCCC	56418981	False	NA	NA	False	NA	NA	NA	56419014	56419416	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_56419000_56419400
WTC11_00042158	chr18	+	7211	27	FSM	ENSG00000091157.15	ENST00000357574.7	7213	27	2	0	2	0	multi-exon	FALSE	canonical	3	31	junction_22	5.81736331823373	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTCCAGTGTTCAC	56650399	True	NA	25	True	AATAAA	-34	NA	56651362	57029811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_56651577_56672496_56672675_56679331_56679439_56681312_56681392_56682678_56682854_56685955_56686033_56686854_56686975_56691215_56691362_56691714_56691818_56694618_56694761_56694949_56695199_56696241_56696463_56717963_56718160_56731382_56731598_56756582_56757353_56758864_56758954_56779430_56779550_56781532_56781657_56816030_56816145_56879943_56880166_56923921_56924109_56935787_56935906_56938532_56938683_56939310_56939394_56962429_56962530_57020744_57020850_57027003
WTC11_00042159	chr18	+	617	3	FSM	ENSG00000091157.15	ENST00000585754.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGAGCCAAGTTATATT	NA	False	NA	NA	False	TATAAA	-15	NA	56694646	56696495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_56694761_56694949_56695199_56696241
WTC11_00042160	chr18	+	10085	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	2	0	-2	multi-exon	TRUE	canonical	3	11	junction_1	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCTGGTTGTCTGTC	57352455	True	NA	22	True	AATAAA	-22	NA	57352556	57368929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
WTC11_00042161	chr18	+	1978	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	-24	0	24	multi-exon	FALSE	canonical	3	28	junction_2	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTTTTCAATCTCCT	57629458	True	NA	NA	False	AAAAAG	-24	NA	57630349	57669320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_57630519_57641558_57642053_57668005
WTC11_00042163	chr18	+	8251	30	FSM	ENSG00000049759.20	ENST00000382850.8	8251	30	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	38.6013498374691	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	58044532	False	NA	15	True	AATAAA	-28	NA	58044547	58401539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042164	chr18	+	5305	32	NIC	ENSG00000049759.20	novel	8633	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	82.0034896848877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58042915	True	NA	79	True	NA	NA	NA	58044225	58398157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58351145_58351200_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042165	chr18	+	8633	31	FSM	ENSG00000049759.20	ENST00000400345.8	8633	31	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	59.1918631795508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	58042915	True	NA	15	True	AATAAA	-28	NA	58044225	58401539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042166	chr18	+	748	2	FSM	ENSG00000049759.20	ENST00000617539.1	728	2	-20	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGGTCGGTTTCACTGG	58043056	True	NA	10	True	AATAAA	-24	NA	58044366	58045477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58044709_58045071
WTC11_00042168	chr18	+	3437	30	NIC	ENSG00000049759.20	novel	4978	29	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	70.2937272138302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTAATGACAATGAATGG	58194425	True	NA	7	True	AATAAA	-13	NA	58195404	58396571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042169	chr18	+	4963	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	15	0	15	0	multi-exon	FALSE	canonical	3	41	junction_1	54.5876939110878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58194425	True	NA	79	True	NA	NA	NA	58195404	58398157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042171	chr18	+	3330	28	NIC	ENSG00000049759.20	novel	4978	29	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	71.4097509988861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCATTTTTTTTTTTTT	58194475	True	NA	23	True	ATTAAA	-23	NA	58195454	58396706	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
WTC11_00042176	chr18	+	1473	1	FSM	ENSG00000267504.1	ENST00000587933.1	1101	1	-326	-46	-326	46	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGAGGCTGAGGCGGG	58371224	False	NA	NA	False	AATACA	-43	NA	58371239	58372712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58371200_58372700
WTC11_00042179	chr18	+	8710	17	FSM	ENSG00000172175.15	ENST00000649217.2	9289	17	0	579	0	-579	multi-exon	FALSE	canonical	3	35	junction_4	6.77743268133295	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGTAATTCCCACTTT	58670331	True	NA	NA	False	AGTAAA	-19	NA	58671464	58753898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58671853_58681169_58681337_58696365_58696488_58700440_58700592_58709377_58709557_58709975_58710073_58710920_58710954_58714082_58714110_58715934_58715968_58723047_58723252_58733396_58733575_58734306_58734382_58735201_58735330_58741864_58742015_58744337_58744496_58745665_58745792_58747404
WTC11_00042180	chr18	+	6452	11	FSM	ENSG00000074657.14	ENST00000336078.8	6696	11	244	0	-104	0	multi-exon	FALSE	canonical	3	44	junction_1	71.0299232718155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	58862808	True	NA	4	True	AATAAA	-20	NA	58862843	58986480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58863167_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042181	chr18	+	5324	10	FSM	ENSG00000074657.14	ENST00000591083.5	5324	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	77.2079123431987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTATTGCAATTGGCCG	58861123	True	NA	NA	False	NA	NA	NA	58862947	58985538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58863167_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042183	chr18	+	5586	10	NIC	ENSG00000074657.14	novel	5585	10	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	95.8876657576168	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	58862843	True	NA	9	True	AATAAA	-14	NA	58863530	58985944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58863687_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042191	chr18	+	6250	11	NIC	ENSG00000074657.14	novel	6556	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	72.9754068162693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	58862333	False	NA	4	True	AATAAA	-20	NA	58864408	58986480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58864530_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042194	chr18	+	6553	10	FSM	ENSG00000074657.14	ENST00000591808.6	6556	10	0	3	0	-3	multi-exon	FALSE	canonical	3	145	junction_1	44.4374994573805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACAGAATTTTTGTTTT	58864402	True	NA	1	True	AATAAA	-17	NA	58864876	58986477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042198	chr18	+	2564	5	NIC	ENSG00000074657.14	novel	5585	10	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	115.350281750848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	58920568	False	NA	9	True	AATAAA	-14	NA	58920585	58985944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58920634_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042201	chr18	+	4024	2	FSM	ENSG00000074657.14	ENST00000590442.1	4024	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	58979548	False	NA	9	True	AATAAA	-14	NA	58979566	58985944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58981618_58983971
WTC11_00042202	chr18	+	2583	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	-414	-115	-414	115	multi-exon	FALSE	canonical	3	757	junction_3	37.1872140511882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGCTCCTTACTAAT	59139351	True	NA	NA	False	NA	NA	NA	59139451	59157426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
WTC11_00042203	chr18	+	765	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	-47	0	-14	0	multi-exon	FALSE	canonical	3	57	junction_4	327.070615464	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131171	True	NA	15	True	AATAAA	-16	NA	59139851	59158832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
WTC11_00042204	chr18	+	750	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	-23	0	-14	0	multi-exon	FALSE	canonical	3	11	junction_3	324.297024346509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131171	True	NA	15	True	AATAAA	-16	NA	59139851	59158832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
WTC11_00042206	chr18	+	809	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	-18	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.2161255371915	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131185	True	NA	15	True	AATAAA	-16	NA	59139865	59158832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
WTC11_00042207	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	59875633	True	NA	25	True	ATTAAA	-14	NA	59899995	59904305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59900236_59902646
WTC11_00042208	chr18	+	8589	29	FSM	ENSG00000134444.15	ENST00000644646.2	8617	29	0	28	0	-28	multi-exon	FALSE	canonical	3	122	junction_7	11.9697748602086	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGTGAATACTTTCAT	62184282	True	NA	NA	False	ATTAAA	-10	NA	62187254	62310221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
WTC11_00042209	chr18	+	764	7	FSM	ENSG00000134444.15	ENST00000588446.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	14.2993783858678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGTTGATATATATTT	62261598	False	NA	97	True	AATAAA	-17	NA	62261610	62275572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373
WTC11_00042210	chr18	+	8164	10	FSM	ENSG00000141655.17	ENST00000586569.3	8148	10	-16	0	7	0	multi-exon	FALSE	canonical	3	15	junction_6	2.29868454061969	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTGGATGTGTGCTTT	62324793	True	NA	NA	False	AATAAA	-14	NA	62325293	62391288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62325428_62348167_62348250_62349811_62349938_62354390_62354535_62358247_62358342_62359954_62360050_62361679_62361794_62366707_62366761_62368700_62369485_62384750
WTC11_00042211	chr18	+	5960	14	FSM	ENSG00000141664.10	ENST00000269499.10	5937	14	-23	0	-23	0	multi-exon	FALSE	canonical	2	8	junction_6	4.46419019339905	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAGAATTGTGCCTCAT	62522775	True	NA	8	True	AATAAA	-14	NA	62523001	62578579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62524364_62539680_62539793_62542497_62542575_62544801_62544874_62550347_62550461_62556202_62556298_62558686_62558771_62560586_62560645_62563008_62563145_62564570_62564636_62565001_62565097_62570102_62570232_62574056_62575551_62576511
WTC11_00042212	chr18	+	704	8	FSM	ENSG00000141664.10	ENST00000621048.4	704	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.89015089373951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCCTCTTTCTAAA	62526865	True	NA	NA	False	NA	NA	NA	62526888	62560644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62526982_62539680_62539793_62542497_62542575_62544801_62544874_62550347_62550461_62556202_62556298_62558686_62558771_62560586
WTC11_00042214	chr18	+	6463	17	FSM	ENSG00000081913.14	ENST00000262719.10	6299	17	-164	0	-164	0	multi-exon	FALSE	canonical	3	152	junction_11	9.55820982192795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAAGTATCTGCTTTTG	62715294	True	NA	24	True	AATAAA	-18	NA	62715376	62980433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62717260_62830034_62830232_62838783_62838910_62860434_62860602_62895010_62895158_62895780_62896012_62902963_62903167_62905223_62905285_62914912_62915009_62919958_62920115_62941717_62941919_62945108_62945272_62958628_62958760_62963367_62963473_62972513_62972709_62975396_62975626_62978261
WTC11_00042215	chr18	+	6396	18	NNC	ENSG00000081913.14	novel	6299	17	NA	NA	-139	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.4593007515088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAAGTATCTGCTTTTG	62715277	False	NA	24	True	AATAAA	-18	NA	62715401	62980433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_62715754_62715795_62717260_62830034_62830232_62838783_62838910_62860434_62860602_62895010_62895158_62895780_62896012_62902963_62903167_62905223_62905285_62914912_62915009_62919958_62920115_62941717_62941919_62945108_62945272_62958628_62958760_62963367_62963473_62972513_62972709_62975396_62975626_62978261
WTC11_00042216	chr18	+	595	5	FSM	ENSG00000206075.14	ENST00000489441.5	1268	5	-9	682	-9	-682	multi-exon	FALSE	canonical	2	2	junction_4	1.11803398874989	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACTTTGTTGGCAAGT	63476909	True	NA	NA	False	NA	NA	NA	63476948	63493019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_63477046_63484421_63484597_63486945_63487084_63489346_63489465_63492952
WTC11_00042217	chr18	+	2112	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	23	junction_2	8.05536398239638	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	63948846	True	NA	16	True	AATAAA	-16	NA	63949290	63961835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
WTC11_00042218	chr18	+	3321	7	FSM	ENSG00000166401.15	ENST00000397985.7	3321	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTATGGACATATG	63970039	True	NA	NA	False	AATAAA	-26	NA	63970080	63989374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_63970171_63978298_63978477_63979800_63979939_63981720_63981839_63983578_63983722_63985092_63985246_63986873
WTC11_00042219	chr18	+	936	1	FSM	ENSG00000273584.1	ENST00000620563.1	552	1	-385	1	-385	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTAGTTAAATGACA	NA	False	NA	NA	False	AATAAA	-14	NA	68907662	68908598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_68907700_68908600
WTC11_00042220	chr18	+	449	3	FSM	ENSG00000206052.11	ENST00000582992.1	506	3	0	57	0	23	multi-exon	FALSE	canonical	3	9	junction_1	2.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCCCTTCCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	69677733	69739103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_69677854_69698403_69698594_69738964
WTC11_00042221	chr18	+	5864	2	FSM	ENSG00000170677.6	ENST00000397942.4	5703	2	-163	2	-163	-2	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTTGTAGTCTACT	70288823	False	NA	4	True	AATAAA	-16	NA	70288881	70330197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_70289091_70324542
WTC11_00042222	chr18	+	5846	2	NNC	ENSG00000170677.6	novel	2625	2	NA	NA	-85	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTTGTAGTCTACT	NA	False	NA	4	True	AATAAA	-16	NA	70314104	70330197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_70314296_70324542
WTC11_00042223	chr18	+	353	2	FSM	ENSG00000263958.3	ENST00000580564.1	285	2	-112	44	-112	0	multi-exon	FALSE	canonical	3	8	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGTACTTTGCTTAAA	72868249	False	NA	-38	True	AATAAA	-41	NA	72868275	72881355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_72868463_72881189
WTC11_00042224	chr18	+	372	2	FSM	ENSG00000263958.3	ENST00000687839.1	369	2	-70	67	-26	-24	multi-exon	FALSE	canonical	3	6	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATCATTGTTAAAATA	72868704	True	NA	-62	True	AATAAA	-17	NA	72868910	72881331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_72869141_72881189
WTC11_00042225	chr18	+	314	2	FSM	ENSG00000263958.3	ENST00000664848.1	2957	2	2643	0	2643	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGTACTTTGCTTAAA	NA	False	NA	-38	True	AATAAA	-41	NA	72880086	72881355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_72880235_72881189
WTC11_00042226	chr18	+	2720	1	Genic_Genomic	ENSG00000261780.3	novel	NA	NA	NA	NA	-38	-6220	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATATCCCATCCTGCA	NA	False	NA	NA	False	ATTAAA	-26	NA	73324902	73327622	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr18_+_73324900_73327600
WTC11_00042227	chr18	+	1285	4	FSM	ENSG00000261780.3	ENST00000659659.1	1285	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTTATAATTTGTG	73325079	False	NA	NA	False	ATTAAA	-16	NA	73325109	73349878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_73325194_73326901_73327189_73332462_73332582_73349083
WTC11_00042228	chr18	+	2992	3	FSM	ENSG00000261780.3	ENST00000583942.2	1443	3	-1551	2	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACCTTTTATAATTTGT	73325079	False	NA	NA	False	ATTAAA	-15	NA	73325109	73349877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_73327189_73332462_73332582_73349083
WTC11_00042229	chr18	+	2305	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	-15	794	-15	-794	multi-exon	TRUE	canonical	3	457	junction_2	22.4	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAATCGTTTTTTCCTTT	74142546	True	NA	NA	False	NA	NA	NA	74148507	74159737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
WTC11_00042230	chr18	+	873	3	FSM	ENSG00000075336.12	ENST00000577952.1	858	3	-15	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTATGGGGAGGTGAC	74142561	True	NA	NA	False	NA	NA	NA	74148522	74158040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74149110_74155144_74155404_74158013
WTC11_00042231	chr18	+	579	3	FSM	ENSG00000075336.12	ENST00000581467.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	13	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGCTAGTGAAATTCACAT	74148748	False	NA	NA	False	NA	NA	NA	74148781	74155493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74149110_74155144_74155208_74155305
WTC11_00042234	chr18	+	600	4	FSM	ENSG00000133313.15	ENST00000583399.5	601	4	-16	17	-16	0	multi-exon	FALSE	canonical	3	1021	junction_1	212.48111027153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGCCGCGCGCCTATG	74478036	True	NA	NA	False	NA	NA	NA	74496290	74506011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848
WTC11_00042235	chr18	+	2672	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	-29	10	-29	0	multi-exon	TRUE	canonical	1	338	junction_1	416.920389967015	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCGCTCCATCTCA	74478023	True	NA	11	True	AATAAA	-20	NA	74496277	74521121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
WTC11_00042236	chr18	+	589	2	FSM	ENSG00000133313.15	ENST00000580229.1	586	2	-3	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTGACTGGATGAGT	74478104	True	NA	NA	False	NA	NA	NA	74496358	74498024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74497508
WTC11_00042237	chr18	+	568	6	FSM	ENSG00000133313.15	ENST00000581513.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	708.532116420985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATGGGAGAGGTTCGA	74478104	True	NA	NA	False	NA	NA	NA	74496358	74508843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74497508_74497596_74499936_74500034_74501328_74501473_74505848_74506012_74508839
WTC11_00042238	chr18	+	525	5	FSM	ENSG00000133313.15	ENST00000579583.5	510	5	-15	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	650.127295227635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAAAGACCTCCATTCT	74478104	True	NA	NA	False	NA	NA	NA	74496358	74512457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74510812_74511014_74512447
WTC11_00042239	chr18	+	4979	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	-4	0	0	0	multi-exon	FALSE	canonical	1	454	junction_9	311.175005901053	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	74478104	True	NA	NA	False	AATAAA	-24	NA	74496358	74523454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
WTC11_00042244	chr18	+	719	1	FSM	ENSG00000276934.1	ENST00000618739.1	483	1	-245	9	-245	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCCGAACTCAGCCTG	74504380	False	NA	NA	False	AATAAA	-7	NA	74504520	74505239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74504500_74505200
WTC11_00042246	chr18	+	4523	6	FSM	ENSG00000133313.15	ENST00000584581.5	4523	6	0	0	0	0	multi-exon	FALSE	canonical	3	1354	junction_3	86.1175940211987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCGCTCCATCTCA	74508803	True	NA	11	True	AATAAA	-20	NA	74508844	74521121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74519097_74519998
WTC11_00042248	chr18	+	8073	9	FSM	ENSG00000215421.10	ENST00000299687.10	8071	9	-3	1	-3	-1	multi-exon	FALSE	canonical	2	9	junction_1	3.80788655293195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGATGGCATGTTATTTT	74597293	True	NA	7	True	AATAAA	-18	NA	74597866	75065670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74597938_74630966_74635707_74641007_74641123_74781427_74781503_74877196_74877364_74881035_74881120_74889917_74890039_74920513_74920693_75063149
WTC11_00042249	chr18	+	4578	1	FSM	ENSG00000215421.10	ENST00000579200.1	4390	1	-190	2	-190	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGATGGCATGTTATTT	NA	False	NA	6	True	AATAAA	-17	NA	75061091	75065669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_75061100_75065700
WTC11_00042250	chr18	+	4840	2	FSM	ENSG00000179981.11	ENST00000322038.5	4992	2	146	6	104	0	multi-exon	FALSE	canonical	1	2	junction_1	0	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGATTGTCATGTCGTCA	75210797	False	NA	26	True	AATAAA	-23	NA	75210900	75289944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_75211244_75285447
WTC11_00042251	chr18	+	10310	31	FSM	ENSG00000130856.17	ENST00000320610.14	10157	31	-161	8	-161	-8	multi-exon	FALSE	canonical	0	0	junction_26	10.3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACTCCTGTATATT	76822219	False	NA	5	True	AATAAA	-17	NA	76822395	76972893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_76822663_76849525_76849669_76851774_76851940_76868684_76868864_76871700_76871826_76875491_76875665_76878008_76878153_76880112_76880317_76881283_76881513_76895012_76895286_76899018_76899223_76904379_76904522_76905154_76905416_76908319_76908574_76910067_76910170_76910659_76910812_76912243_76912348_76913746_76913899_76915646_76915860_76919775_76920059_76923070_76923175_76925188_76925555_76927036_76927183_76927276_76927518_76927926_76928107_76937155_76937344_76947520_76947653_76955984_76956183_76959686_76959817_76960678_76960856_76968214
WTC11_00042252	chr18	+	6007	3	FSM	ENSG00000256463.10	ENST00000537592.7	6007	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGATGCTCTGGTAG	NA	False	NA	NA	False	NA	NA	NA	78979817	78998969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_78980357_78992073_78995463_78996890
WTC11_00042253	chr18	+	9117	4	FSM	ENSG00000256463.10	ENST00000575389.6	3996	4	-75	-5046	-75	0	multi-exon	FALSE	canonical	3	39	junction_1	18.3847763108502	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAAATGTGATTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	78980199	79002677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_78980357_78992073_78994906_78995121_78995463_78996890
WTC11_00042255	chr18	+	3607	5	FSM	ENSG00000267655.1_ENSG00000166377.21	ENST00000586722.5	1650	5	-119	-1838	4	0	multi-exon	FALSE	canonical	3	20	junction_4	28.2079332812597	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATGCTTTAACATTT	NA	False	NA	8	True	ATTAAA	-17	NA	79069288	79117920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
WTC11_00042257	chr18	+	4382	30	FSM	ENSG00000166377.21	ENST00000426216.6	4361	30	-21	0	-19	0	multi-exon	FALSE	canonical	3	19	junction_28	16.5552438786354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTTCTCACACACTCT	NA	False	NA	22	True	AGTAAA	-31	NA	79069372	79378283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79375393_79375427_79377246
WTC11_00042258	chr18	+	4434	29	FSM	ENSG00000166377.21	ENST00000307671.12	4329	29	-108	3	4	1	multi-exon	FALSE	canonical	3	41	junction_8	12.4040706781183	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTCTCACACACTCTA	NA	False	NA	23	True	AGTAAA	-32	NA	79069288	79378284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79377246
WTC11_00042259	chr18	+	1246	1	FSM	ENSG00000279416.1	ENST00000624383.1	1302	1	30	26	30	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGACAGAGCAAGGCTC	NA	False	NA	NA	False	NA	NA	NA	79085163	79086409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79085200_79086400
WTC11_00042263	chr18	+	3381	8	FSM	ENSG00000131196.18	ENST00000591814.5	4819	8	-120	1558	-46	455	multi-exon	FALSE	canonical	3	15	junction_1	26.9587742711734	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTAGCTAACATCAATA	NA	False	NA	NA	False	NA	NA	NA	79395809	79468456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
WTC11_00042265	chr18	+	4873	10	FSM	ENSG00000131196.18	ENST00000427363.7	4873	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	32.022368725087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	79395494	True	NA	16	True	AATAAA	-20	NA	79395929	79529323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486938_79527527
WTC11_00042267	chr18	+	2550	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	-19	0	-8	0	multi-exon	FALSE	canonical	3	75	junction_1	7.62915995589639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	79399639	True	NA	19	True	AATAAA	-19	NA	79400313	79468001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
WTC11_00042268	chr18	+	4753	10	FSM	ENSG00000131196.18	ENST00000329101.8	4595	10	-56	-102	6	100	multi-exon	FALSE	canonical	3	16	junction_9	25.7384757863101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGTTGGGAAGGCTGTG	79399605	True	NA	NA	False	AATGAA	-2	NA	79400279	79529425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486938_79527527
WTC11_00042269	chr18	+	4344	10	FSM	ENSG00000131196.18	ENST00000318065.9	4302	10	-42	0	6	0	multi-exon	FALSE	canonical	3	22	junction_9	24.2201834004331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	79399605	True	NA	16	True	AATAAA	-20	NA	79400279	79529323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
WTC11_00042270	chr18	+	3584	12	FSM	ENSG00000060069.18	ENST00000075430.11	3538	12	-50	4	-7	0	multi-exon	FALSE	canonical	3	78	junction_10	43.7056268480595	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	79679782	False	NA	15	True	AATAAA	-11	NA	79679795	79754499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79736354_79736522_79753651
WTC11_00042271	chr18	+	3763	13	FSM	ENSG00000060069.18	ENST00000613122.5	3744	13	-7	-12	-7	12	multi-exon	FALSE	canonical	3	170	junction_10	20.6067680359849	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGTGGCAGCGGTGA	79679782	False	NA	31	True	AATAAA	-27	NA	79679795	79754515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79736354_79736522_79753651
WTC11_00042272	chr18	+	3228	12	FSM	ENSG00000060069.18	ENST00000591598.5	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	60.0393810155241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	79680114	True	NA	19	True	AATAAA	-15	NA	79680151	79754503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79753651
WTC11_00042273	chr18	+	1887	4	FSM	ENSG00000060069.18	ENST00000299543.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	102.587631916436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	79714826	False	NA	15	True	AATAAA	-11	NA	79714838	79754499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79715529_79717534_79717677_79717809_79718017_79753651
WTC11_00042274	chr18	+	701	4	FSM	ENSG00000226742.4	ENST00000451882.3	689	4	-17	5	-4	0	multi-exon	FALSE	canonical	2	5	junction_2	3.74165738677394	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTATTTTATCTTTTT	79964525	True	NA	22	True	AATAAA	-27	NA	79964625	79970817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79964787_79966611_79966679_79968088_79968184_79970439
WTC11_00042277	chr18	+	1300	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	-29	4319	16	0	multi-exon	FALSE	canonical	3	174	junction_4	10.9239797387826	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCACTGTGTGTAATTT	NA	False	NA	21	True	NA	NA	NA	80034404	80046332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
WTC11_00042278	chr18	+	1551	3	FSM	ENSG00000101546.13	ENST00000593019.1	1551	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCACTGTGTGTAATTT	80041286	False	NA	21	True	NA	NA	NA	80041301	80046332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80042220_80044211_80044286_80045773
WTC11_00042279	chr18	+	5157	4	FSM	ENSG00000101544.9	ENST00000262198.9	5157	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	7.58653778449403	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGTTTAATTCTTTT	80105330	True	NA	76	True	ATTAAA	-21	NA	80109261	80140346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80109473_80117529_80117651_80133102_80133193_80135611
WTC11_00042282	chr18	+	717	1	FSM	ENSG00000278000.1	ENST00000616901.1	662	1	-83	28	-83	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAATAAAATGACAC	NA	False	NA	-14	True	CATAAA	-29	NA	80161668	80162385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80161700_80162400
WTC11_00042283	chr18	-	2682	17	FSM	ENSG00000079134.13	ENST00000578529.5	2681	17	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_4	105.363934027493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-255482	False	NA	-13	True	AATAAA	-15	NA	261162	214519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185
WTC11_00042287	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.2741215816939	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262367	True	NA	-13	True	AATAAA	-15	NA	268047	214519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
WTC11_00042296	chr18	-	4613	10	FSM	ENSG00000158270.12	ENST00000400256.5	5724	10	0	1111	0	-1108	multi-exon	FALSE	canonical	1	3	junction_8	3.74495545474505	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCAGGCAGGTGGGAC	-500592	True	NA	NA	False	NA	NA	NA	500701	317847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_320065_321661_321808_331667_331778_333006_333144_334741_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
WTC11_00042297	chr18	-	611	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	-27	2	22	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-656405	True	NA	-9	True	AATAAA	-20	NA	658318	649619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_649965_658052
WTC11_00042298	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-658264	False	NA	-9	True	AATAAA	-20	NA	658340	649619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_649965_657841
WTC11_00042299	chr18	-	6346	10	FSM	ENSG00000132199.20	ENST00000584259.6	6340	10	0	-6	0	0	multi-exon	FALSE	canonical	3	42	junction_1	35.3787269554411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-693265	False	NA	NA	False	ATTAAA	-24	NA	693277	670317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_673077_674160_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548
WTC11_00042300	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	21.7300611033553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-710562	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
WTC11_00042304	chr18	-	1409	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	-12	0	0	multi-exon	FALSE	canonical	2	8	junction_9	51.1172399707009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATTAAACTGTAATTTG	-710547	True	NA	-41	True	NA	NA	NA	712615	674027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
WTC11_00042311	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	45.5277592190098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-804607	True	NA	0	True	ATTAAA	-22	NA	812242	721587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
WTC11_00042312	chr18	-	4639	12	FSM	ENSG00000176105.14	ENST00000584307.5	4639	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	114.274354512172	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-812502	False	NA	0	True	ATTAAA	-22	NA	812546	721587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812383
WTC11_00042313	chr18	-	2923	9	NIC	ENSG00000101574.15	novel	3684	9	NA	NA	29	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	23.8219305472919	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGATCTCATTTGAATT	-2570598	True	NA	-11	True	ATTAAA	-15	NA	2571442	2537536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2567511_2567655_2571148
WTC11_00042314	chr18	-	3681	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	3	0	3	0	multi-exon	FALSE	canonical	3	47	junction_7	14.0484652186636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-2570658	True	NA	-4	True	ATTAAA	-22	NA	2571502	2537529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
WTC11_00042316	chr18	-	1131	1	FSM	ENSG00000266783.1	ENST00000583253.1	1049	1	-121	39	-121	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATATTTGTGTGCAT	-2561497	False	NA	NA	False	AATACA	-5	NA	2562341	2561210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2561200_2562300
WTC11_00042317	chr18	-	6227	20	FSM	ENSG00000101577.10	ENST00000261596.8	6229	20	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_19	10.3517097494492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCATTTGGCTCTTTTCT	-3011936	False	NA	NA	False	AATAAA	-19	NA	3011947	2916995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3011717
WTC11_00042318	chr18	-	6201	20	FSM	ENSG00000101577.10	ENST00000677752.1	6052	20	-149	0	-149	0	multi-exon	FALSE	canonical	3	20	junction_13	7.75168643969038	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCATTTGGCTCTTT	-3013282	False	NA	NA	False	AATAAA	-16	NA	3013293	2916998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3013086
WTC11_00042319	chr18	-	6654	13	FSM	ENSG00000170579.17	ENST00000315677.8	6655	13	0	1	0	-1	multi-exon	FALSE	canonical	3	20	junction_4	4.97423919364113	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGTCTGTGTGTTTTT	-4452670	True	NA	-4	True	AATAAA	-17	NA	4455307	3496032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3499395_3502492_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
WTC11_00042320	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.19535711353802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	-4452629	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
WTC11_00042321	chr18	-	1755	5	FSM	ENSG00000170579.17	ENST00000498188.5	1759	5	0	4	0	-4	multi-exon	FALSE	canonical	2	2	junction_1	8.68907359849138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGTCAGATGTGTGTTC	NA	False	NA	1	True	AATAAA	-16	NA	3880076	3708345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3708502_3729134_3729376_3742334_3742513_3814058_3814274_3879111
WTC11_00042322	chr18	-	1246	1	FSM	ENSG00000250933.1	ENST00000509132.1	967	1	-90	-189	-90	189	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	3978705	3977459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3977500_3978700
WTC11_00042324	chr18	-	496	1	FSM	ENSG00000264775.1	ENST00000577627.1	496	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAATAAGTTTGACTTG	-5003191	False	NA	NA	False	NA	NA	NA	5003254	5002758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5002800_5003300
WTC11_00042325	chr18	-	10452	1	FSM	ENSG00000264575.1	ENST00000581067.1	1875	1	-8594	17	-8594	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGATGCATTTTGATAT	NA	False	NA	NA	False	NA	NA	NA	5247192	5236740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5236700_5247200
WTC11_00042326	chr18	-	4084	4	FSM	ENSG00000198081.11	ENST00000578327.1	442	4	-641	-3001	237	119	multi-exon	FALSE	canonical	3	47	junction_3	49.3986054683958	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTGAAACCACATAGTC	-5295449	False	NA	NA	False	NA	NA	NA	5295465	5288899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5294800
WTC11_00042327	chr18	-	1830	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	50	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	-5296195	False	NA	NA	False	NA	NA	NA	5296211	5290857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5295812
WTC11_00042328	chr18	-	3990	19	NIC	ENSG00000082397.18	novel	3370	20	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	66	junction_6	16.1654256873836	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGTATGTTTAATAA	-5544293	True	NA	-1	True	AATAAA	-24	NA	5544307	5392381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
WTC11_00042334	chr18	-	1920	1	FSM	ENSG00000206432.4	ENST00000383490.2	1920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGGAGGAGGAAAGAGAA	-5892090	False	NA	NA	False	NA	NA	NA	5892104	5890184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5890200_5892100
WTC11_00042335	chr18	-	923	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	-56	0	56	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGACAGGATTGAGGG	-6461073	True	NA	NA	False	ATTAAA	-35	NA	6463010	6462087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6462100_6463000
WTC11_00042336	chr18	-	479	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	12	0	-12	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCCAATCATGATCACA	-6729834	False	104	NA	False	NA	NA	NA	6729862	6728832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6729169_6729719
WTC11_00042337	chr18	-	9643	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	-1	0	1	multi-exon	FALSE	canonical	3	98	junction_44	47.2915135395517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGCCTTTTATTTCTT	-7111114	True	NA	-1	True	AATACA	-19	NA	7117797	6941740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
WTC11_00042340	chr18	-	808	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	10	78	-10	multi-exon	FALSE	canonical	3	9	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATATTATTCCTGTGTA	-8707566	False	NA	NA	False	AATAAA	-5	NA	8707621	8695865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_8696122_8707069
WTC11_00042341	chr18	-	3926	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	-3	0	0	multi-exon	TRUE	canonical	3	68	junction_18	31.2511938830115	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-9613396	True	NA	-15	True	ATTAAA	-22	NA	9614559	9546790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
WTC11_00042350	chr18	-	449	1	FSM	ENSG00000264644.1	ENST00000581937.1	1246	1	848	-51	848	51	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTCCAGAGTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	9678645	9678196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9678200_9678600
WTC11_00042351	chr18	-	314	4	FSM	ENSG00000154864.14	ENST00000579949.2	3682	4	0	3368	0	-3368	multi-exon	FALSE	canonical	3	19	junction_2	2.16024689946929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTTCTCGATCCCCT	NA	False	NA	NA	False	AAAAAG	-35	NA	10748500	10741030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_10741103_10742493_10742616_10744141_10744232_10748470
WTC11_00042352	chr18	-	4108	21	ISM	ENSG00000154864.14	ENST00000503781.7	8259	52	-981	91020	0	7213	5prime_fragment	FALSE	canonical	3	20	junction_3	20.3353755805001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTCGGCCTGCGGAAG	-11148347	True	NA	NA	False	NA	NA	NA	11149569	10762546	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_10762626_10762921_10763099_10770147_10770309_10773411_10773630_10784783_10784958_10787035_10787185_10789078_10789366_10791200_10791325_10794771_10795003_10797373_10797523_10800336_10800476_10801389_10801429_10803874_10803995_10807111_10807275_10855352_10855567_10857000_10857212_10871252_10871416_10911185_10911229_10979534_10979661_11066126_11066223_11148524
WTC11_00042353	chr18	-	1636	8	FSM	ENSG00000154889.17	ENST00000309976.13	1636	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	33.4383380116236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-11906773	True	NA	-7	True	AATAAA	-21	NA	11908350	11884052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
WTC11_00042354	chr18	-	2530	7	FSM	ENSG00000154889.17	ENST00000592447.5	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	24.0393196428037	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTGTACAGTATGTAAA	NA	False	NA	-13	True	AATATA	-17	NA	11897277	11884194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11884878_11885044_11885675_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983
WTC11_00042356	chr18	-	1210	2	NNC	ENSG00000267480.1	novel	527	2	NA	NA	3	231	intron_retention	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAGAGCCACAGAGT	NA	False	NA	NA	False	NA	NA	NA	12032178	12030946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_12030983_12031004
WTC11_00042357	chr18	-	1226	1	FSM	ENSG00000256616.3	ENST00000590929.1	1450	1	232	-8	174	8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCAGATTTGTAGCAT	NA	False	NA	NA	False	NA	NA	NA	12076422	12075196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12075200_12076400
WTC11_00042358	chr18	-	3177	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	-17	0	17	multi-exon	TRUE	canonical	3	621	junction_15	63.1699097672302	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTGGATATTTTTAGAA	-12363110	True	NA	16	True	NA	NA	NA	12377227	12328926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
WTC11_00042359	chr18	-	627	5	FSM	ENSG00000141385.12	ENST00000590811.1	627	5	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	329.076738770761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTATCAAGACCTAGGAG	-12376760	False	NA	NA	False	NA	NA	NA	12377002	12358703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12376968
WTC11_00042360	chr18	-	5779	17	NIC	ENSG00000134278.16	novel	5638	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	16.1224561946994	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTTGAGTTGCTA	-12657100	True	NA	-1	True	AATAAA	-17	NA	12658116	12446511	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12459754_12459929_12463350_12463494_12464867_12464959_12479698_12479872_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
WTC11_00042361	chr18	-	5619	16	FSM	ENSG00000134278.16	ENST00000410092.7	5533	16	-85	-1	-23	0	multi-exon	FALSE	canonical	3	41	junction_5	11.7215850274421	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTTGAGTTGCTA	NA	False	NA	-1	True	AATAAA	-17	NA	12658130	12446511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12463350_12463494_12464867_12464959_12479698_12479872_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
WTC11_00042362	chr18	-	1264	10	FSM	ENSG00000134278.16	ENST00000464481.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	18.9254548031526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGAGGACGATCAGTG	NA	False	NA	NA	False	NA	NA	NA	12493149	12449665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12459754_12459929_12463350_12463494_12464867_12464959_12479698_12479872_12493071
WTC11_00042363	chr18	-	3868	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	-973	0	973	multi-exon	FALSE	canonical	3	60	junction_4	13.2121907143015	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGTGTGAA	-12700816	True	NA	NA	False	NA	NA	NA	12702723	12671651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
WTC11_00042364	chr18	-	2502	11	NIC	ENSG00000101624.11	novel	2895	12	NA	NA	7	216	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	25.5321366125125	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGGTTTATTCGTGG	-12700808	True	NA	NA	False	AATAAA	-17	NA	12702715	12672880	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
WTC11_00042368	chr18	-	1880	1	FSM	ENSG00000260302.3	ENST00000563722.1	1273	1	-616	9	-399	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAGAAACTATATATAC	-12776516	False	NA	NA	False	AATAAA	-14	NA	12776539	12774659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12774700_12776500
WTC11_00042369	chr18	-	2264	1	FSM	ENSG00000175354.20	ENST00000589444.1	2264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	-12787716	False	NA	-1	True	ATTAAA	-19	NA	12787741	12785477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785500_12787700
WTC11_00042370	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_5	56.5340496111158	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	-12881205	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
WTC11_00042372	chr18	-	741	4	FSM	ENSG00000175354.20	ENST00000591901.5	743	4	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_2	198.503288525796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	NA	False	NA	-4	True	ATTAAA	-16	NA	12802151	12785480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785845_12793481_12793575_12794383_12794486_12801969
WTC11_00042374	chr18	-	4276	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	-806	0	806	multi-exon	FALSE	canonical	3	252	junction_4	52.9362824535309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTTAAGGAAGAAAAAATT	-12881104	True	NA	NA	False	NA	NA	NA	12884237	12791345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
WTC11_00042380	chr18	-	4294	5	NIC	ENSG00000177150.13	novel	4340	5	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	2	11	junction_3	78.1040972036679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGTTTATTTGTCACA	-13723097	True	NA	NA	False	AATAAA	-20	NA	13726502	13663346	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_13666714_13671861_13671974_13681604_13682106_13687742_13687883_13726328
WTC11_00042381	chr18	-	4244	4	FSM	ENSG00000177150.13	ENST00000402563.5	4240	4	0	-4	0	0	multi-exon	FALSE	canonical	3	168	junction_2	5.31245915016974	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGTTTATTTGTCACA	-13723187	True	NA	NA	False	AATAAA	-20	NA	13726592	13663346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
WTC11_00042385	chr18	-	2114	5	FSM	ENSG00000175322.12	ENST00000587419.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	14.9227175809234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATTGTAAATGTTCT	-14131060	True	NA	NA	False	AATAAA	-14	NA	14132429	14075993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14077527_14078199_14078299_14084876_14085077_14124349_14124477_14132274
WTC11_00042386	chr18	-	558	5	FSM	ENSG00000175322.12	ENST00000592049.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGGGAGATGATGTCACA	-14131065	True	NA	NA	False	NA	NA	NA	14132434	14077505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14132274
WTC11_00042388	chr18	-	6654	1	FSM	ENSG00000175322.12	ENST00000624133.1	6497	1	-152	-5	-152	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	NA	False	NA	-13	True	AATAAA	-26	NA	14106591	14099937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14099900_14106600
WTC11_00042389	chr18	-	2119	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	-2	0	2	multi-exon	FALSE	canonical	2	3	junction_1	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAAGGATTTTCTTCCA	-14131059	True	NA	-11	True	AATAAA	-28	NA	14132428	14099935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14101774_14124349_14124477_14132274
WTC11_00042390	chr18	-	6762	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	-2	0	2	multi-exon	FALSE	canonical	3	25	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAAGGATTTTCTTCCA	-14131066	True	NA	-11	True	AATAAA	-28	NA	14132435	14099935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14106410_14124349_14124477_14132274
WTC11_00042391	chr18	-	6626	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	29	-6056	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131059	True	NA	-13	True	AATAAA	-26	NA	14132428	14099937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14106410_14132274
WTC11_00042393	chr18	-	9370	33	FSM	ENSG00000067900.8	ENST00000399799.3	9446	33	0	76	0	-76	multi-exon	TRUE	canonical	3	97	junction_32	30.2888277412233	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTTAATCCTATAAA	-21108816	True	NA	NA	False	AATAAA	-35	NA	21111813	20946981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_20951388_20953577_20953786_20954782_20955045_20955166_20955246_20959839_20959929_20960135_20960207_20966916_20967077_20967751_20967941_20968771_20968861_20969114_20969209_20970347_20970514_20979909_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
WTC11_00042394	chr18	-	672	3	FSM	ENSG00000067900.8	ENST00000583556.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	10.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGGATAATATATAAATC	-20982764	False	NA	NA	False	AATATA	-27	NA	20982783	20969957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_20970514_20979909_20980005_20982762
WTC11_00042395	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_3	28.0592643176828	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-21595721	True	NA	14	True	AATAAA	-42	NA	21600704	21529283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
WTC11_00042396	chr18	-	4792	13	FSM	ENSG00000141446.11	ENST00000383276.1	4773	13	0	-19	0	0	multi-exon	FALSE	canonical	3	14	junction_4	80.8614641772512	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-21600819	False	NA	14	True	AATAAA	-42	NA	21600884	21529283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21540576_21540701_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
WTC11_00042397	chr18	-	2035	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	-6	0	6	multi-exon	FALSE	canonical	3	36	junction_4	24.8646335183127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTTTTTATCTGC	-21703221	True	NA	0	True	AATAAA	-22	NA	21704774	21650894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
WTC11_00042398	chr18	-	254	2	FSM	ENSG00000158201.10	ENST00000580477.1	291	2	0	37	0	-37	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACCAATAAAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	21656956	21654925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21655084_21656860
WTC11_00042399	chr18	-	900	5	ISM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	13094	0	-145	5prime_fragment	FALSE	canonical	3	69	junction_1	14.3592304807744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTAAATGCGGTTG	-21703221	True	NA	NA	False	AATAAA	-20	NA	21704774	21663994	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
WTC11_00042401	chr18	-	508	1	FSM	ENSG00000243303.1	ENST00000473394.1	348	1	-131	-29	-131	29	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAGCA	NA	False	NA	NA	False	ATTAAA	-8	NA	21855118	21854610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21854600_21855100
WTC11_00042402	chr18	-	510	1	FSM	ENSG00000265939.1	ENST00000583290.1	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCGGGCTGCCCAACCT	NA	False	NA	NA	False	AAGAAA	-33	NA	22900995	22900485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22900500_22901000
WTC11_00042404	chr18	-	2793	11	NIC	ENSG00000134490.14	novel	2941	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	15	junction_4	27.726521599364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGGTCACTTGTTTC	-23436170	True	NA	-30	True	AATAAA	-10	NA	23437932	23296018	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
WTC11_00042405	chr18	-	3074	16	FSM	ENSG00000134490.14	ENST00000542162.5	1022	16	-63	-1989	0	-2	multi-exon	TRUE	canonical	3	25	junction_9	26.2317873326746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGGTCACTTGTTTC	-23436170	True	NA	-30	True	AATAAA	-10	NA	23437932	23296018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23376826_23376942_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
WTC11_00042412	chr18	-	755	2	FSM	ENSG00000141458.13	ENST00000590723.5	755	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCAGACACAAGACAATC	-23533507	False	NA	NA	False	NA	NA	NA	23533517	23522314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23522907_23533354
WTC11_00042414	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_14	13.254912611305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-23583986	True	NA	54	True	AATACA	-19	NA	23586506	23531441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
WTC11_00042417	chr18	-	452	2	FSM	ENSG00000141458.13	ENST00000587163.1	431	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	106	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCATCCAGGGGATT	-23534565	False	NA	NA	False	AGTAAA	-19	NA	23534581	23533201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23533518_23534445
WTC11_00042419	chr18	-	1022	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	-151	-25	-12	25	multi-exon	FALSE	canonical	3	63	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTCCAGCTTTTATT	-23662432	True	NA	4	True	AATAAA	-40	NA	23662923	23648385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23649194_23662709
WTC11_00042420	chr18	-	362	1	FSM	ENSG00000279332.1	ENST00000623599.1	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTTCAGTCAACCTAAT	NA	False	NA	NA	False	NA	NA	NA	24135829	24135467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24135500_24135800
WTC11_00042421	chr18	-	3733	16	NNC	ENSG00000141447.19	novel	3317	14	NA	NA	17	20999	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	109.810422496632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAAATCAGTATACAG	-24272147	False	NA	NA	False	TTTAAA	-44	NA	24272215	24141045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_24141115_24159612_24159829_24161896_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
WTC11_00042423	chr18	-	4159	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	-7	0	0	multi-exon	FALSE	canonical	3	94	junction_19	98.4212134337526	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-24392538	True	NA	-1	True	AATAAA	-23	NA	24397824	24162044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
WTC11_00042424	chr18	-	3094	13	NIC	ENSG00000141447.19	novel	3317	14	NA	NA	81	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	85.9460425047147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-24272083	False	NA	-8	True	AATAAA	-16	NA	24272151	24162051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24196124_24196201_24225041_24225199_24239219_24239383_24271621
WTC11_00042430	chr18	-	1889	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	-2	0	2	multi-exon	FALSE	canonical	2	10	junction_4	94.1524694312369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCATCATTTTTCTT	-24392502	True	NA	-11	True	AATAAA	-17	NA	24397788	24357122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
WTC11_00042431	chr18	-	1858	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	79.9202727723073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCATCATTTTTCT	-24392554	True	NA	-12	True	AATAAA	-16	NA	24397840	24357123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
WTC11_00042432	chr18	-	4885	8	FSM	ENSG00000198795.11	ENST00000361524.8	4887	8	0	2	0	-2	multi-exon	FALSE	canonical	3	20	junction_7	8.23630588879976	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGAGTGTATTTGTGTG	-25351828	True	NA	-2	True	AATAAA	-16	NA	25352166	25061925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_25062742_25089464_25089581_25091949_25092082_25195159_25195245_25224344_25227698_25322007_25322188_25350906_25350948_25352004
WTC11_00042434	chr18	-	3317	11	NNC	ENSG00000141380.14	novel	3402	11	NA	NA	0	63345	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	197.47303613405	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCACTGTTTTTTGGATG	-26082062	True	NA	NA	False	NA	NA	NA	26090598	25952907	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_25952934_26016255_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
WTC11_00042435	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	224.36187287505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-26082077	True	NA	-26	True	AATAAA	-17	NA	26090613	26016252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
WTC11_00042436	chr18	-	2314	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	7	0	6	0	multi-exon	FALSE	canonical	2	16	junction_10	270.512476606903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-26090357	True	NA	-15	True	ATTAAA	-13	NA	26091210	26017342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
WTC11_00042447	chr18	-	559	1	FSM	ENSG00000188985.6	ENST00000579682.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGAAGGTGTTTTCTA	-26171243	False	NA	NA	False	NA	NA	NA	26171284	26170725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26170700_26171300
WTC11_00042448	chr18	-	365	1	FSM	ENSG00000263829.1	ENST00000578364.1	658	1	124	169	124	-169	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACTAGAAAAGACAGAAGA	NA	False	NA	NA	False	NA	NA	NA	26256231	26255866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26255900_26256200
WTC11_00042449	chr18	-	2107	5	FSM	ENSG00000134504.14	ENST00000408011.7	2103	5	0	-4	0	4	multi-exon	TRUE	canonical	3	11	junction_4	11.1130553854464	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAAACACACATGTGG	-26549190	True	NA	NA	False	AATAAA	-22	NA	26549435	26454969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26548890
WTC11_00042450	chr18	-	1092	1	FSM	ENSG00000277534.1	ENST00000620414.1	2821	1	1726	3	1726	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCACTCAGTGTTTTGC	-26543820	False	NA	-8	True	AATAAA	-14	NA	26544065	26542973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26543000_26544100
WTC11_00042451	chr18	-	5177	4	FSM	ENSG00000171885.18	ENST00000581374.5	1586	4	442	-4033	0	259	multi-exon	FALSE	canonical	3	20	junction_2	1.69967317119759	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTATGGTGAATCTAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	26862406	26851783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26856490_26860771_26860853_26861130_26861296_26862181
WTC11_00042452	chr18	-	11485	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	-91	-15	-91	15	multi-exon	FALSE	canonical	3	154	junction_1	70.4573629935154	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATCTCTGTGCTTAA	NA	False	NA	10	True	AATAAA	-38	NA	27185399	26906465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
WTC11_00042453	chr18	-	2892	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	0	712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	133.430131529576	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCATGTGTCACCCTTAT	-27181056	True	NA	NA	False	ATTAAA	-21	NA	27185308	26915064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_26917351_27024115_27024158_27048464_27048504_27078602_27078738_27142688_27142906_27185135
WTC11_00042454	chr18	-	2035	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	-2	0	0	multi-exon	FALSE	canonical	3	78	junction_1	103.572438418722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	-27181046	True	NA	-4	True	GATAAA	-15	NA	27185298	26915776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
WTC11_00042455	chr18	-	704	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	0	-19906	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	114.304155654989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTATATGCCTTGCT	-27181056	True	NA	NA	False	AATAAA	-21	NA	27185308	26935684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_26935880_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
WTC11_00042456	chr18	-	4916	17	NNC	ENSG00000170558.10	novel	3143	17	NA	NA	-57	5642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.6525860712421	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTTCCTGGAAAGTAT	-28177325	True	NA	NA	False	NA	NA	NA	28178003	27945323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_27945352_27950966_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
WTC11_00042457	chr18	-	5129	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	-873	-240	-57	240	multi-exon	FALSE	canonical	3	70	junction_11	10.1893190264228	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCCTTTACCTTCAGT	-28177325	True	NA	NA	False	AATAGA	-24	NA	28178003	27950725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
WTC11_00042458	chr18	-	1354	2	FSM	ENSG00000170558.10	ENST00000674998.1	3627	2	2273	0	2273	0	multi-exon	FALSE	canonical	3	96	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTAGCACAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	27963562	27951211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_27952360_27963356
WTC11_00042459	chr18	-	12331	16	FSM	ENSG00000134755.18	ENST00000280904.11	12331	16	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	17.0351271071147	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	-31100015	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31068213_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
WTC11_00042460	chr18	-	12377	17	FSM	ENSG00000134755.18	ENST00000251081.8	12377	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.7062857569342	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	-31100015	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31068213_31068298_31068345_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
WTC11_00042461	chr18	-	5929	9	FSM	ENSG00000118276.12	ENST00000306851.10	4672	9	-1257	0	-2	0	multi-exon	FALSE	canonical	3	76	junction_6	19.0312243431683	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTGAAGATGTAATT	-31685815	False	23	-16	True	AATATA	-13	NA	31685838	31622245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31625762_31626282_31626385_31626998_31627122_31630958_31631147_31638643_31638761_31645354_31645480_31657975_31658090_31666255_31666373_31684311
WTC11_00042463	chr18	-	6234	29	FSM	ENSG00000153339.15	ENST00000283351.10	6230	29	0	-4	0	4	multi-exon	FALSE	canonical	3	151	junction_17	26.3696253833296	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAATATTACTCAGGA	-31936978	True	NA	NA	False	AATAAA	-24	NA	31943128	31829192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
WTC11_00042466	chr18	-	5438	28	NIC	ENSG00000153339.15	novel	6230	29	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	21	junction_1	44.8123660181891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATAGCGTATTAGTAT	-31943157	False	NA	-6	True	AATAAA	-13	NA	31943175	31829945	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_31830990_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
WTC11_00042468	chr18	-	7037	6	FSM	ENSG00000141441.16	ENST00000399218.8	7033	6	0	-4	0	4	multi-exon	FALSE	canonical	3	11	junction_1	6.11228271597445	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTTGTTCCTCAGT	-32470474	False	NA	3	True	AATAAA	-21	NA	32470484	32263517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_32268766_32270216_32270384_32287030_32288204_32310192_32310324_32392894_32393036_32470307
WTC11_00042469	chr18	-	7434	6	FSM	ENSG00000141441.16	ENST00000269209.7	7434	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.44980619863884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGCAGTTGTTCCT	-32470302	True	NA	-1	True	AATAAA	-17	NA	32470882	32263521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_32268769_32270216_32270384_32287030_32288204_32310192_32310324_32392894_32393036_32470307
WTC11_00042470	chr18	-	963	1	FSM	ENSG00000215492.6	ENST00000521273.1	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAACAAAGCTTAGCA	-32413086	True	NA	NA	False	NA	NA	NA	32413176	32412213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_32412200_32413200
WTC11_00042471	chr18	-	4040	9	NIC	ENSG00000197705.10	novel	4271	9	NA	NA	75	80	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	7.1019363556709	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATATTTTTGTTCTGAA	-32772079	False	NA	77	True	ATTAAA	-30	NA	32772092	32672592	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_32674798_32677172_32677331_32680168_32680328_32680408_32680600_32687154_32687234_32695462_32695553_32741927_32742050_32769644_32770635_32772046
WTC11_00042472	chr18	-	4310	4	ISM	ENSG00000186814.14	ENST00000420878.7	4323	5	22423	-6	139	0	3prime_fragment	FALSE	canonical	3	32	junction_3	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	NA	False	NA	-4	True	AATAAA	-16	NA	35267809	35251061	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_35254382_35263512_35263658_35263944_35264456_35267475
WTC11_00042473	chr18	-	3937	3	NIC	ENSG00000186814.14	novel	4122	4	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-35289480	True	NA	-4	True	AATAAA	-16	NA	35290189	35251061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_35254382_35263944_35264456_35290083
WTC11_00042474	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	18.2391520270726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-35289520	True	NA	-4	True	AATAAA	-16	NA	35290229	35251061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
WTC11_00042475	chr18	-	3947	1	NIC	ENSG00000186814.14	novel	1305	9	NA	NA	833	1376	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTAAGATTGCGCCACT	-35262188	False	NA	NA	False	NA	NA	NA	35263213	35259266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_35259300_35263200
WTC11_00042476	chr18	-	5696	2	FSM	ENSG00000268573.1	ENST00000586922.2	4382	2	4	-1318	4	1318	multi-exon	TRUE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCTATGCTATTTTTT	-35289488	True	NA	0	True	AATAAA	-21	NA	35290197	35279548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35285178_35290130
WTC11_00042477	chr18	-	6299	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	-17	0	17	multi-exon	FALSE	canonical	3	203	junction_3	16.1314048434171	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATTTGTTACTCCAT	-35339158	True	NA	-3	True	AATAAA	-38	NA	35344456	35332209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
WTC11_00042478	chr18	-	6344	4	FSM	ENSG00000172466.16	ENST00000261332.11	6256	4	-71	-17	-35	17	multi-exon	FALSE	canonical	3	40	junction_3	89.9123029525005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATTTGTTACTCCAT	-35339193	True	NA	-3	True	AATAAA	-38	NA	35344491	35332209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344359
WTC11_00042479	chr18	-	586	1	FSM	ENSG00000186496.12	ENST00000586585.1	2555	1	-96	2065	-96	23	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGGATGCCTGTGGA	-35374392	False	NA	NA	False	NA	NA	NA	35374461	35373875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35373900_35374500
WTC11_00042480	chr18	-	457	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	-2	0	2	multi-exon	FALSE	canonical	3	15	junction_2	7.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTTTGG	-35494560	True	NA	0	True	AATAAA	-19	NA	35497940	35443868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35444023_35446874_35446956_35497718
WTC11_00042481	chr18	-	3250	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	-5	0	5	multi-exon	FALSE	canonical	3	21	junction_1	132.222114262328	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTGGTCATGTTGTG	-35494553	True	NA	-4	True	AATAAA	-25	NA	35497933	35452224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
WTC11_00042482	chr18	-	1285	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	-342	0	342	multi-exon	FALSE	canonical	3	295	junction_1	17.0055138117024	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGCTCCAGAAAGGGAG	-35494580	True	NA	NA	False	NA	NA	NA	35497960	35467990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
WTC11_00042483	chr18	-	602	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	-7	0	6	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGAATTTTTGTTTTA	-35494524	True	NA	-1	True	AATAAA	-24	NA	35497904	35468326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35468743_35497718
WTC11_00042488	chr18	-	832	1	FSM	ENSG00000279074.1	ENST00000622938.1	237	1	-234	-361	-234	361	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGAAAATGGCTAAATG	-35483514	False	NA	NA	False	CATAAA	-33	NA	35483901	35483069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35483100_35483900
WTC11_00042490	chr18	-	4417	8	NNC	ENSG00000141425.18	novel	1945	9	NA	NA	0	8249	intron_retention	FALSE	non_canonical	0	0	junction_1	227.27983291304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAACAAATACCTCTA	-36052768	True	NA	NA	False	NA	NA	NA	36067530	35976137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_35976168_35989828_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
WTC11_00042491	chr18	-	1945	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	272.485980143933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-36052768	True	NA	-1	True	AATAAA	-25	NA	36067530	35989823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
WTC11_00042492	chr18	-	4423	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	-2	0	2	multi-exon	FALSE	canonical	3	483	junction_1	77.6410902093015	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTGAATCTGAT	-36052797	True	NA	1	True	AATAAA	-27	NA	36067559	35989821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
WTC11_00042493	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	201.244596834554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-36052794	True	NA	-63	True	NA	NA	NA	36067556	35989885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
WTC11_00042495	chr18	-	3377	7	ISM	ENSG00000141425.18	ENST00000588737.5	1264	8	-23	31509	-6	340	5prime_fragment	FALSE	canonical	3	75	junction_5	277.339993910403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGTGGTTTAAAATTT	-36052820	True	NA	-21	True	ATTAAA	-21	NA	36067582	36024548	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
WTC11_00042496	chr18	-	2357	3	FSM	ENSG00000141425.18	ENST00000585953.5	2357	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCTTTGTAAATTATCA	-36030805	False	43	NA	False	AATAAA	-19	NA	36030850	36024888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36027076_36027183_36027311_36030807
WTC11_00042497	chr18	-	2209	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	35	35711	9	2	5prime_fragment	FALSE	canonical	3	577	junction_5	54.5688555863141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTGTCTCATGTTT	-36052759	True	NA	-5	True	AATAAA	-15	NA	36067521	36025596	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
WTC11_00042498	chr18	-	2073	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	1	-1052	0	342	multi-exon	FALSE	canonical	2	19	junction_1	237.753665703719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGTTTAAAATTTGT	-36052794	True	NA	-19	True	ATTAAA	-23	NA	36067556	36024546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
WTC11_00042499	chr18	-	3566	10	FSM	ENSG00000141424.13	ENST00000269187.10	3566	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_8	37.4396633940762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122801	True	NA	-1	True	AATAAA	-19	NA	36129340	36108530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
WTC11_00042500	chr18	-	3620	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	-617	0	0	multi-exon	FALSE	canonical	3	26	junction_9	73.3572351620294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122842	True	NA	-1	True	AATAAA	-19	NA	36129381	36108530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
WTC11_00042501	chr18	-	4346	11	NNC	ENSG00000141424.13	novel	3566	10	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	94.6858489955072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36129364	False	NA	-1	True	AATAAA	-19	NA	36129423	36108530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36128030_36128728_36129113
WTC11_00042503	chr18	-	1683	9	NNC	ENSG00000134779.15	novel	3835	7	NA	NA	0	22246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	445.112046989295	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACAGCTTTTAACTGT	-36828705	False	NA	NA	False	NA	NA	NA	36828773	36755400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36755427_36777203_36777218_36796070_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042504	chr18	-	2625	2	FSM	ENSG00000134779.15	ENST00000590258.2	2679	2	0	54	0	-54	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACAGAATTTGTTCT	-36798539	True	NA	NA	False	NA	NA	NA	36798585	36777700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36780189_36798448
WTC11_00042505	chr18	-	1268	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	379.520750420843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829216	36780026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042507	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	329.843734045212	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-36828774	False	NA	-4	True	AATAAA	-16	NA	36828842	36786572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042508	chr18	-	4317	8	NNC	ENSG00000134779.15	novel	3835	7	NA	NA	0	503	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	363.960358908965	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAACTGTTACTGTTTCA	-36825179	True	NA	1	True	NA	NA	NA	36829011	36793604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36794833_36794862_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042510	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_1	91.5600895587155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-36825170	True	NA	-14	True	ACTAAA	-20	NA	36829002	36794107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042511	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	403.702068362301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	-36828918	False	NA	-26	True	TATAAA	-17	NA	36828986	36796071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
WTC11_00042512	chr18	-	3253	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	-205	-1946	0	0	multi-exon	FALSE	canonical	3	929	junction_1	76.8749634146254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	-36828918	False	NA	-26	True	TATAAA	-17	NA	36828986	36796071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042516	chr18	-	507	3	FSM	ENSG00000267374.3	ENST00000658494.1	517	3	0	10	0	-10	multi-exon	TRUE	canonical	0	0	junction_1	10	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCGCACTGCTGCCTC	-39800095	True	NA	NA	False	AATAAA	-13	NA	39800305	39733137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_39733376_39751328_39751361_39800068
WTC11_00042517	chr18	-	1713	6	FSM	ENSG00000267313.7	ENST00000592302.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	6.61513416341649	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGCCCCTCTGTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	41520597	41480270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_41481268_41481881_41481958_41482444_41482578_41501119_41501277_41516419_41516556_41520383
WTC11_00042518	chr18	-	640	3	FSM	ENSG00000267313.7	ENST00000601445.5	620	3	0	-20	0	20	multi-exon	FALSE	canonical	3	20	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTTAGCCTTCAACT	NA	False	NA	NA	False	NA	NA	NA	41520594	41500983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_41501277_41516419_41516556_41520383
WTC11_00042519	chr18	-	547	3	FSM	ENSG00000267313.7	ENST00000600183.5	547	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGACAAATCGAAACATT	-41631340	False	NA	NA	False	NA	NA	NA	41632075	41521197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_41521497_41525354_41525527_41631999
WTC11_00042520	chr18	-	630	1	NIC	ENSG00000152214.14	novel	1086	5	NA	NA	230234	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCCCTTTAAAGAG	-42743684	True	NA	-36	True	AATAAA	-17	NA	42743861	42743231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_42743200_42743900
WTC11_00042521	chr18	-	4044	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	-108	0	-63	0	multi-exon	FALSE	canonical	3	12	junction_1	3.39934634239519	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	NA	False	NA	-25	True	AATAAA	-18	NA	43277598	43267891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
WTC11_00042522	chr18	-	12688	44	FSM	ENSG00000152223.15	ENST00000282041.11	12688	44	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_32	7.98220031718897	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCGGGCCTGTCTCA	-45966110	True	NA	-3	True	AATAAA	-21	NA	45967329	45847608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_45852650_45855572_45855688_45857852_45858069_45858565_45858783_45860103_45860347_45865614_45865760_45866797_45867008_45867562_45867749_45870566_45870743_45876235_45876343_45878375_45878449_45879012_45879215_45880074_45880224_45882273_45882488_45884616_45884812_45887750_45887908_45889797_45889941_45899403_45899567_45900995_45901168_45903972_45904118_45907957_45908082_45910520_45910743_45912289_45912457_45913705_45913829_45915510_45915622_45916008_45916207_45916437_45916583_45917678_45917820_45922340_45922601_45923267_45923388_45925737_45925903_45928868_45929010_45930675_45930831_45934808_45934967_45939599_45939756_45943160_45943312_45944004_45944120_45946662_45946769_45948502_45948577_45949483_45949592_45951101_45951239_45952399_45952644_45954393_45955339_45967176
WTC11_00042523	chr18	-	2002	3	ISM	ENSG00000152229.18	ENST00000589328.5	2900	14	81505	2	3222	-2	3prime_fragment	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTCGTATTTTTGT	NA	False	NA	-14	True	AATAAA	-18	NA	45990752	45983537	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_45985451_45988701_45988760_45990721
WTC11_00042524	chr18	-	569	4	FSM	ENSG00000152229.18	ENST00000591729.1	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.49443825784929	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACCCGAAGCAACAAGAA	NA	False	NA	NA	False	NA	NA	NA	46016225	45999458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_45999535_46005468_46005532_46011180_46011288_46015902
WTC11_00042525	chr18	-	521	5	FSM	ENSG00000152229.18	ENST00000587042.1	859	5	0	338	0	-338	multi-exon	FALSE	canonical	3	19	junction_1	3.46410161513775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCCACCATCATGTAAT	-46071937	True	NA	NA	False	NA	NA	NA	46072272	46011097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
WTC11_00042526	chr18	-	1895	13	NNC	ENSG00000152234.16	novel	5761	12	NA	NA	0	15974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2015.09228490078	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAGAAGAAAAAAAGAAA	-46055831	True	NA	NA	False	AAAAAG	-9	NA	46098296	46064273	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_46064309_46084148_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
WTC11_00042527	chr18	-	5761	12	FSM	ENSG00000152234.16	ENST00000398752.11	5761	12	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_8	390.106130929046	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTCTTTTTTGCTCT	-46055831	True	NA	2	True	TTTAAA	-20	NA	46098296	46080247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
WTC11_00042530	chr18	-	313	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGAATTTCTGCCTGA	-46433407	True	NA	NA	False	AATAAA	-23	NA	46433550	46429225	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr18_-_46429415_46433426
WTC11_00042531	chr18	-	1499	6	FSM	ENSG00000101638.14	ENST00000536490.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.15843122174846	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAGGAACCGGGGCAGA	-46756753	False	57	NA	False	NA	NA	NA	46756810	46679882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46756377
WTC11_00042532	chr18	-	10945	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	298	0	-298	multi-exon	FALSE	canonical	3	233	junction_2	63.5668589921681	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGAACTCATCCAGAGG	-46910744	True	NA	NA	False	NA	NA	NA	46917507	46803515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
WTC11_00042533	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	126.823669145612	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	-46910691	True	NA	NA	False	NA	NA	NA	46917454	46812279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
WTC11_00042534	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	65.384068310934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-46910740	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
WTC11_00042537	chr18	-	2187	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_5	182.945726621009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-47146237	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
WTC11_00042538	chr18	-	3553	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	7	-1336	0	1336	multi-exon	FALSE	canonical	3	51	junction_5	164.297156261317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAAAATCTTACTTATA	-47146230	True	NA	NA	False	NA	NA	NA	47150493	47106071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
WTC11_00042545	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	57.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-47168621	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47156233_47157435_47157538_47176186
WTC11_00042546	chr18	-	34626	11	FSM	ENSG00000175387.16	ENST00000262160.11	34626	11	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_10	36.9269549245534	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACGAGACTGCTTTTCTT	-47930641	False	NA	NA	False	AATAAA	-20	NA	47930659	47808956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360
WTC11_00042547	chr18	-	23870	13	NNC	ENSG00000175387.16	novel	34626	11	NA	NA	-377	-11247	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	105.571723907914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGGCCCAAATATATT	-47931505	False	NA	NA	False	NA	NA	NA	47931523	47820203	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_47820893_47820912_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
WTC11_00042548	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_10	75.1039279931483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-47929825	True	NA	-92	True	AATAAA	-19	NA	47931141	47831550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
WTC11_00042555	chr18	-	4402	4	FSM	ENSG00000101665.10	ENST00000262158.8	3341	4	-1061	0	-1061	0	multi-exon	FALSE	canonical	3	91	junction_2	9.39266853573691	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTTGTCCTCCAACT	-48949359	True	NA	-5	True	ATTAAA	-24	NA	48952026	48919852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_48921911_48942480_48942556_48948383_48948438_48949811
WTC11_00042556	chr18	-	2049	2	FSM	ENSG00000101665.10	ENST00000545051.2	2211	2	162	0	87	0	multi-exon	FALSE	canonical	3	114	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAATAAAGAAAAGAT	-48942634	False	NA	-119	True	TATAAA	-2	NA	48942645	48920026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_48921911_48942480
WTC11_00042558	chr18	-	4990	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	59	0	-29	0	multi-exon	FALSE	canonical	3	140	junction_11	17.1472255408856	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	49460743	49041473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
WTC11_00042559	chr18	-	2209	16	NNC	ENSG00000141627.14	novel	5049	17	NA	NA	117	-32	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	58.6142189802668	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAACAATAATAAATGTAAA	-49456443	False	NA	-56	True	AATAGA	-42	NA	49460510	49043835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_49044205_49097401_49097516_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391643_49430254_49430448_49460397
WTC11_00042561	chr18	-	5486	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	62	0	-55	multi-exon	FALSE	canonical	3	248	junction_2	102.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACAACAGAGCAATACCC	-49310487	False	176747	-63	True	NA	NA	NA	49487234	49477304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49487042
WTC11_00042562	chr18	-	5340	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	55	0	-55	multi-exon	FALSE	canonical	3	155	junction_2	149	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACAACAGAGCAATACCC	-49310505	False	176747	-63	True	NA	NA	NA	49487252	49477304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49487206
WTC11_00042563	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6920.04049642935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	-49314839	False	NA	23	True	TATAAA	-42	NA	49491586	49481680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
WTC11_00042565	chr18	-	753	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	-14	-125	0	97	multi-exon	FALSE	canonical	3	8803	junction_6	2523.35183282519	5018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGGCACAGTGGCTCA	-49315732	True	NA	-9	True	ATTAAA	-12	NA	49492479	49488355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
WTC11_00042566	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	6366.89601111299	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	-49315735	True	NA	7	True	ATTAAA	-39	NA	49492482	49488452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
WTC11_00042567	chr18	-	523	4	FSM	ENSG00000265681.8	ENST00000584364.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	2084.35425651847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49314191	False	NA	-21	True	AATAAA	-21	NA	49490938	49488480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792
WTC11_00042568	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	6439.05065889026	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315662	True	NA	-21	True	AATAAA	-21	NA	49492409	49488480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
WTC11_00042569	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	1753.85844354669	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315093	False	NA	-24	True	AATAAA	-18	NA	49491840	49488483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
WTC11_00042570	chr18	-	790	7	FSM	ENSG00000265681.8	ENST00000579248.5	790	7	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_6	4989.20085172855	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315697	True	NA	-24	True	AATAAA	-18	NA	49492444	49488483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492257
WTC11_00042571	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	5759.97620133972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	-49315067	False	NA	-58	True	AGTAAA	-1	NA	49491814	49488517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
WTC11_00042574	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	5775.55508674274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	-49315736	True	NA	NA	False	AAAAAG	-1	NA	49492483	49489358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
WTC11_00042581	chr18	-	2938	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	-12	0	12	multi-exon	FALSE	canonical	3	630	junction_9	123.546662349809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTTCGTTTGTTGTA	-49808002	False	5531	13	True	AATAAA	-31	NA	49813533	49782151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
WTC11_00042582	chr18	-	1851	2	FSM	ENSG00000167315.18	ENST00000591171.1	1850	2	0	-1	0	-1	multi-exon	FALSE	canonical	3	1029	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTTCCTGTCATT	-49786587	False	NA	-11	True	AATAAA	-17	NA	49786619	49783503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49783932_49785196
WTC11_00042583	chr18	-	1658	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	-1	0	-1	multi-exon	FALSE	canonical	3	138	junction_9	266.160770128799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTTCCTGTCATT	-49808422	True	NA	-11	True	AATAAA	-17	NA	49813953	49783503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
WTC11_00042586	chr18	-	3109	19	FSM	ENSG00000167306.20	ENST00000324581.10	3109	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_11	10.8344728745397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAAGTTTGATTT	NA	False	NA	-4	True	AATAAA	-16	NA	49902833	49826259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566_49849661_49853448_49853648_49863226_49863328_49864140_49864381_49872166_49872233_49875686_49875828_49877762_49877883_49878944_49879091_49880370_49880456_49894940_49895175_49902593
WTC11_00042587	chr18	-	6061	39	NIC	ENSG00000167306.20	novel	9583	40	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_32	10.9536925053328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAAGTTTGATTT	-50194200	True	NA	-4	True	AATAAA	-16	NA	50195174	49826259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566_49849661_49853448_49853648_49863226_49863328_49864140_49864381_49872166_49872233_49875686_49875828_49877762_49877883_49878944_49879091_49880370_49880456_49894940_49895175_49902593_49902834_49904671_49904829_49906418_49906631_49912061_49912174_49929511_49929599_49936251_49936350_49937244_49937398_49953259_49953344_49954312_49954436_49962265_49962407_49962948_49963031_49974349_49974616_49980443_49980554_49984717_49984826_49990438_49990521_49992287_49992432_50001254_50001412_50036849_50036995_50040142_50040315_50055267_50055379_50194766
WTC11_00042588	chr18	-	1602	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	91	0	91	0	multi-exon	FALSE	canonical	3	44	junction_7	8.46223227050641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-49849741	False	NA	-34	True	NA	NA	NA	49849755	49826289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
WTC11_00042589	chr18	-	2434	17	FSM	ENSG00000141644.18	ENST00000382948.9	2434	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	59.1650234513602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTCCACTGTGACCCT	-50281764	False	7686	NA	False	NA	NA	NA	50281774	50267516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50267664_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042590	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	53.0312039628557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281513	False	7686	-3	True	TTTAAA	-31	NA	50281523	50268845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042591	chr18	-	4901	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	4	0	2	0	multi-exon	FALSE	canonical	3	49	junction_8	45.368809648137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281755	False	7686	-3	True	TTTAAA	-31	NA	50281765	50268845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042592	chr18	-	3083	16	FSM	ENSG00000141644.18	ENST00000347968.7	3091	16	9	-1	2	0	multi-exon	FALSE	canonical	3	49	junction_8	56.6142502673429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281755	False	7686	-3	True	TTTAAA	-31	NA	50281765	50268845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042595	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	31.4759332665451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	-50281456	False	7686	-28	True	AATAAA	-11	NA	50281466	50271049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042604	chr18	-	2280	15	FSM	ENSG00000154832.16	ENST00000412036.6	2280	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	80.8142554104845	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCACATTGCTGCG	-50279950	True	NA	-11	True	AATAAA	-21	NA	50287636	50282342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284719_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
WTC11_00042605	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	82.8145210573555	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50279965	True	NA	-15	True	AATAAA	-17	NA	50287651	50282346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
WTC11_00042606	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	38.3762921074766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50280006	True	NA	-15	True	AATAAA	-17	NA	50287692	50282346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
WTC11_00042607	chr18	-	2378	13	FSM	ENSG00000154832.16	ENST00000590901.5	2562	13	184	0	184	0	multi-exon	FALSE	canonical	3	227	junction_9	40.6150628872261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCTGTCTCCACATT	-50286921	False	NA	-17	True	AATAAA	-15	NA	50286931	50282348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50286258_50286538_50286640_50286739
WTC11_00042609	chr18	-	2438	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	-15	0	0	multi-exon	FALSE	canonical	3	24	junction_9	82.079193970459	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCTGTCTCCACATT	NA	False	NA	-17	True	AATAAA	-15	NA	50287839	50282348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
WTC11_00042616	chr18	-	4142	2	FSM	ENSG00000176624.12	ENST00000406189.4	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	-51197511	False	NA	-3	True	AATAAA	-23	NA	51197681	51174549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_51177577_51196566
WTC11_00042617	chr18	-	1183	3	FSM	ENSG00000134046.12	ENST00000583046.1	1182	3	0	-1	0	0	multi-exon	FALSE	canonical	3	298	junction_1	191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAATACCTTTCATT	-54220040	True	NA	-6	True	AATAAA	-35	NA	54224617	54202679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_54203103_54204997_54205158_54224017
WTC11_00042618	chr18	-	4024	3	FSM	ENSG00000134046.12	ENST00000398398.6	1237	3	-42	-2745	-20	2745	multi-exon	FALSE	canonical	3	359	junction_1	160.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTTGGTGGCAATTTC	-54224664	False	NA	-3	True	AATAAA	-20	NA	54224689	54199934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_54203127_54204997_54205158_54224017
WTC11_00042619	chr18	-	226	1	FSM	ENSG00000264350.1	ENST00000580909.1	226	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAATGGCTGTTCAG	-54406607	False	NA	NA	False	NA	NA	NA	54407114	54406888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_54406900_54407100
WTC11_00042620	chr18	-	7926	19	FSM	ENSG00000196628.20	ENST00000638154.3	7946	19	21	-1	21	0	multi-exon	FALSE	canonical	3	21	junction_7	38.7625328199446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	-55586304	False	NA	-3	True	TATAAA	-14	NA	55587328	55222333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257389_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044
WTC11_00042622	chr18	-	8295	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	26	-4	14	1	multi-exon	FALSE	canonical	3	61	junction_3	30.5408313945686	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAGTATTATATTTG	-55587579	False	NA	1	True	TATAAA	-18	NA	55588603	55222329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
WTC11_00042623	chr18	-	7887	20	NIC	ENSG00000196628.20	novel	8041	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	39.6031560901296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAGTCTTTTAGTATTA	-55582620	True	NA	-5	True	TATAAA	-12	NA	55588192	55222335	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
WTC11_00042635	chr18	-	1252	9	NNC	ENSG00000091164.13	novel	6840	8	NA	NA	0	50254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	310.519725621417	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGATTGTATCTGTGA	-56628602	True	NA	NA	False	NA	NA	NA	56638592	56546954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_56546980_56602821_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
WTC11_00042636	chr18	-	1251	9	NNC	ENSG00000091164.13	novel	6840	8	NA	NA	0	50254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	310.519725621417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGATTGTATCTGTGA	-56628602	True	NA	NA	False	NA	NA	NA	56638592	56546954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_56546980_56602822_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
WTC11_00042637	chr18	-	6855	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	-15	0	15	multi-exon	FALSE	canonical	3	825	junction_4	81.3611249495803	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTATAAATTTTGTCC	-56628602	True	NA	NA	False	ATTAAA	-31	NA	56638592	56597193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
WTC11_00042638	chr18	-	2799	6	NNC	ENSG00000258609.3	novel	2604	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	18.2054936763604	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071486	True	NA	-1	True	AATAAA	-15	NA	57072119	57054557	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_57056251_57056588_57056711_57057499_57058001_57058677_57058751_57069809_57070004_57071903
WTC11_00042639	chr18	-	3926	4	NIC	ENSG00000258609.3	novel	2604	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	19.131126469709	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071486	True	NA	-1	True	AATAAA	-15	NA	57072119	57054557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_57058001_57058677_57058751_57069809_57070004_57071903
WTC11_00042640	chr18	-	2599	3	NNC	ENSG00000258609.3	novel	766	3	NA	NA	0	1013	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCTATGCCTCATC	-57071486	True	NA	NA	False	ATTAAA	-34	NA	57072119	57062541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_57064731_57069809_57070004_57071903
WTC11_00042642	chr18	-	7321	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	368	0	-356	multi-exon	FALSE	canonical	3	117	junction_4	12.4755761390006	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGCCATTACACTGTG	-57583890	True	NA	NA	False	AAGAAA	-41	NA	57586702	57544744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
WTC11_00042643	chr18	-	7339	11	FSM	ENSG00000066926.13	ENST00000652755.1	7695	11	0	356	0	-356	multi-exon	FALSE	canonical	3	14	junction_9	39.2989821751149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGCCATTACACTGTG	-57583890	True	NA	NA	False	AAGAAA	-41	NA	57586702	57544744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580054_57580200_57586553
WTC11_00042649	chr18	-	331	1	FSM	ENSG00000278703.1	ENST00000611316.1	481	1	154	-4	154	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCTGGACAGAAATTT	NA	False	NA	2	True	AATAAA	-23	NA	57588937	57588606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57588600_57588900
WTC11_00042650	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_13	126.674722052589	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-57593581	True	NA	-30	True	AATAAA	-20	NA	57621836	57600655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
WTC11_00042651	chr18	-	1036	3	FSM	ENSG00000134440.12	ENST00000589314.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	3	1578	junction_2	64.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTATATGTATGTATAA	-57605719	False	102	NA	False	NA	NA	NA	57605862	57601342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57601784_57602354_57602944_57605856
WTC11_00042652	chr18	-	612	2	FSM	ENSG00000134440.12	ENST00000589001.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	1483	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTCAGATGCTATCGTT	-57607047	False	34	-33	True	NA	NA	NA	57607190	57605933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57605971_57606615
WTC11_00042653	chr18	-	1097	7	FSM	ENSG00000134440.12	ENST00000411676.6	1097	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	612.332811649206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACGAAGGCACCTGGCT	-57593553	True	NA	NA	False	NA	NA	NA	57621808	57607155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57621707
WTC11_00042654	chr18	-	406	3	FSM	ENSG00000081923.15	ENST00000588255.1	489	3	83	0	83	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAGGGAAAGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	57688585	57684117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57684193_57685071_57685116_57688298
WTC11_00042655	chr18	-	4837	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	-13	0	13	multi-exon	TRUE	canonical	3	473	junction_5	60.936898145176	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGATCTTGGATAATAA	-59349716	True	NA	87	True	AATAAA	-30	NA	59359265	59327809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
WTC11_00042658	chr18	-	6403	12	FSM	ENSG00000183287.14	ENST00000649564.1	6403	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	14.9633160244072	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTACTGTGTTTTG	-59697406	False	NA	-2	True	NA	NA	NA	59697662	59430938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211_59697470_59697576
WTC11_00042660	chr18	-	826	2	FSM	ENSG00000267279.3	ENST00000666670.1	875	2	44	5	-23	-5	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTCTTTGTTCTTGT	-61606825	True	NA	NA	False	AATAAA	-13	NA	61606962	61605940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_61606655_61606850
WTC11_00042661	chr18	-	7936	31	FSM	ENSG00000197563.11	ENST00000640252.2	7936	31	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_29	35.2584111320342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTTATGATTTGA	-62183487	True	NA	NA	False	AATAAA	-18	NA	62187056	62041163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
WTC11_00042662	chr18	-	6345	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	81	-381	0	0	multi-exon	FALSE	canonical	3	96	junction_28	15.1195912913123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAACTTTCTACCTT	-62183406	True	NA	NA	False	NA	NA	NA	62186975	62042470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
WTC11_00042673	chr18	-	2380	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	-13	0	13	multi-exon	FALSE	canonical	3	23	junction_13	41.9139667920479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCTTTAATGATACTTC	-62183480	True	NA	NA	False	AATAAA	-10	NA	62187049	62112551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
WTC11_00042674	chr18	-	2177	16	FSM	ENSG00000197563.11	ENST00000589339.6	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_14	46.9393935481347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAACTGGTCAGAAAAC	-62183459	True	NA	NA	False	NA	NA	NA	62187028	62112810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
WTC11_00042675	chr18	-	2034	16	NIC	ENSG00000197563.11	novel	3891	12	NA	NA	0	332	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	63.9254426830368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTGTATTCCAGTCT	-62183420	True	NA	NA	False	AATAAA	-31	NA	62186989	62118214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_62118658_62123506_62123545_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
WTC11_00042677	chr18	-	5147	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	-4	0	4	multi-exon	FALSE	canonical	3	120	junction_5	13.4421485642992	1051	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTAGAAGTTTGTGTT	-63364037	True	NA	0	True	AATAAA	-33	NA	63367206	63327721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
WTC11_00042678	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_5	21.2953046467995	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-63417468	True	NA	0	True	ATTAAA	-23	NA	63422476	63389189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
WTC11_00042679	chr18	-	1228	8	FSM	ENSG00000119541.10	ENST00000589604.5	1672	8	0	444	0	-444	multi-exon	FALSE	canonical	3	4	junction_5	114.207473217717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCATTTTTATCTATC	-63417455	True	NA	NA	False	AAAAAG	-1	NA	63422463	63397033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63410289_63410447_63411466_63411579_63422232
WTC11_00042680	chr18	-	1316	9	FSM	ENSG00000119541.10	ENST00000591475.5	2008	9	0	692	0	-444	multi-exon	FALSE	canonical	3	291	junction_3	21.5953554034195	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCATTTTTATCTATC	-63417475	True	NA	NA	False	AAAAAG	-1	NA	63422483	63397033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
WTC11_00042682	chr18	-	1692	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	15	0	-15	multi-exon	FALSE	canonical	2	6	junction_1	1.98976975388345	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGACATAAAATCATTTTT	-63644183	True	NA	NA	False	AATAAA	-3	NA	63644256	63637273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
WTC11_00042683	chr18	-	1632	8	FSM	ENSG00000057149.16	ENST00000283752.10	1707	8	9	66	0	-65	multi-exon	FALSE	canonical	0	0	junction_5	1.97948663722157	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATGTTTCTAAATTTT	-63661828	False	NA	NA	False	NA	NA	NA	63661884	63655262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63656062_63656830_63656987_63657269_63657413_63658512_63658631_63659398_63659528_63660799_63660857_63661051_63661243_63661845
WTC11_00042684	chr18	-	3243	1	FSM	ENSG00000260578.1	ENST00000562669.1	3176	1	-67	0	-67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTGTCTGGTGATA	NA	False	NA	NA	False	AATAAA	-21	NA	67485033	67481790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_67481800_67485000
WTC11_00042685	chr18	-	9266	2	FSM	ENSG00000171451.15	ENST00000310045.9	9266	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTATGATTGGGATAA	NA	False	NA	-10	True	AATAAA	-14	NA	67516720	67506586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_67515493_67516360
WTC11_00042686	chr18	-	434	1	FSM	ENSG00000260747.1	ENST00000567372.1	442	1	-1	9	-1	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTGCCACATTTTTA	NA	False	NA	NA	False	NA	NA	NA	68278244	68277810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68277800_68278200
WTC11_00042687	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	17.3789144271634	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-68712762	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
WTC11_00042688	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	18.2029376413674	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	-68712712	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
WTC11_00042689	chr18	-	530	7	FSM	ENSG00000166479.10	ENST00000564008.5	530	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	58.7293699003224	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATTTAAAATTTGATT	-68712719	True	NA	NA	False	NA	NA	NA	68715065	68697225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68711363_68711404_68713845_68713901_68714935
WTC11_00042690	chr18	-	315	1	FSM	ENSG00000278532.1	ENST00000619582.1	524	1	-189	398	-189	-398	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTATGACCACTGAC	-69399427	False	NA	NA	False	NA	NA	NA	69399438	69399123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_69399100_69399400
WTC11_00042691	chr18	-	7671	49	FSM	ENSG00000176225.15	ENST00000640769.2	7830	49	0	159	0	-119	multi-exon	TRUE	canonical	3	20	junction_36	9.84142940018821	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCGTCTATAATCTCAG	-70204038	True	NA	NA	False	AATACA	-21	NA	70205687	70003189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_70004237_70005197_70005268_70006380_70006485_70017406_70017675_70020614_70020818_70024721_70024849_70028723_70028802_70030011_70030110_70030875_70030982_70047970_70048189_70051410_70051549_70054130_70054285_70057741_70057833_70059849_70060043_70065828_70065923_70073905_70073995_70075351_70075542_70086612_70086685_70087988_70088148_70092109_70092221_70092675_70092805_70109497_70109718_70114444_70114600_70121555_70121701_70127501_70127742_70128357_70128547_70134472_70134542_70135183_70135281_70139598_70139717_70140099_70140189_70142287_70142388_70145611_70145784_70148900_70149038_70149970_70150088_70150607_70150734_70166061_70166189_70166918_70167032_70168854_70169068_70176674_70176846_70188107_70188224_70190537_70190720_70193287_70193454_70196500_70196649_70197623_70197739_70199413_70199505_70201893_70201984_70204085_70204264_70205127_70205316_70205627
WTC11_00042692	chr18	-	3307	25	FSM	ENSG00000176225.15	ENST00000640376.1	3307	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	9.65516557197349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATAGTGAAGAACATATT	-70199405	False	NA	NA	False	NA	NA	NA	70199472	70092186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_70092221_70092675_70092805_70109497_70109718_70114444_70114600_70121555_70121701_70128357_70128547_70134472_70134542_70135183_70135281_70139598_70139717_70140099_70140189_70142287_70142388_70145611_70145784_70148900_70149038_70149970_70150088_70150607_70150734_70166061_70166189_70166918_70167032_70168854_70169068_70176674_70176846_70188107_70188224_70190537_70190720_70193287_70193454_70196500_70196649_70197623_70197739_70199413
WTC11_00042693	chr18	-	1870	13	FSM	ENSG00000176225.15	ENST00000581583.1	2355	13	0	485	0	-485	multi-exon	FALSE	canonical	3	21	junction_10	5.29871577732651	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATATTTTCTTTCTTAAT	-70204077	True	NA	NA	False	AATAAA	-28	NA	70205726	70166918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_70167032_70168854_70169068_70176674_70176846_70188107_70188224_70190537_70190720_70193287_70193454_70196500_70196649_70197623_70197739_70199413_70199505_70201893_70201984_70204085_70204264_70205127_70205316_70205627
WTC11_00042694	chr18	-	6748	11	FSM	ENSG00000166342.19	ENST00000327305.11	6721	11	-27	0	-27	0	multi-exon	FALSE	canonical	3	30	junction_1	16.0564628732483	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGTACTCTTTATT	-72866723	True	NA	-2	True	AATAAA	-23	NA	72868014	72743755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_72748165_72749013_72749089_72750061_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
WTC11_00042695	chr18	-	629	2	FSM	ENSG00000166342.19	ENST00000582281.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTTTAGGGTACAGGA	NA	False	NA	NA	False	ATTAAA	-41	NA	72749038	72747141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_72747746_72749013
WTC11_00042696	chr18	-	4436	5	NNC	ENSG00000166342.19	novel	575	4	NA	NA	0	4949	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	26.1055549644132	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTCATGGATTCAATGT	-72866696	True	NA	NA	False	AATAAA	-2	NA	72867987	72854030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_72857302_72858825_72859075_72864807_72864946_72865187_72865242_72867263
WTC11_00042697	chr18	-	3220	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	11	0	-11	multi-exon	FALSE	canonical	3	2345	junction_2	44.4325331260778	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTGCACTGCGGACT	-74277517	True	NA	-17	True	AATAAA	-7	NA	74291963	74250856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
WTC11_00042698	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	1017.03171042008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	-74276595	False	NA	-9	True	AATATA	-17	NA	74291041	74253295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
WTC11_00042699	chr18	-	259	1	FSM	ENSG00000235297.3	ENST00000474180.1	414	1	48	107	48	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAGAAGACAGGTCAG	NA	False	NA	17	True	NA	NA	NA	74390249	74389990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74390000_74390200
WTC11_00042700	chr18	-	4921	2	FSM	ENSG00000264247.2	ENST00000654728.1	4931	2	14	-4	3	4	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGTGAAATTCCATC	-74597497	True	NA	NA	False	NA	NA	NA	74597821	74590312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74593840_74596427
WTC11_00042702	chr18	-	7485	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	33	0	-33	multi-exon	FALSE	canonical	3	28	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTTACAAATCAAATAAAG	-75208994	False	NA	NA	False	NA	NA	NA	75209139	75195145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_75202341_75208849
WTC11_00042703	chr18	-	8128	6	NIC	ENSG00000101493.11	novel	8678	7	NA	NA	-79	0	intron_retention	FALSE	canonical	3	15	junction_5	16.6805275695944	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGAGATTTGTAAGACA	-76495289	False	NA	-17	True	AATAAA	-16	NA	76495321	76358196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_76362558_76370527_76370596_76371466_76371572_76378854_76380304_76441244_76443212_76495143
WTC11_00042704	chr18	-	1749	2	FSM	ENSG00000197971.16	ENST00000490319.1	4820	2	3063	8	594	-7	multi-exon	FALSE	canonical	3	7	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGTATTTGCATGGGT	NA	False	NA	-8	True	AATAAA	-12	NA	76984893	76978841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_76980472_76984774
WTC11_00042705	chr18	-	4844	4	FSM	ENSG00000197971.16	ENST00000397860.7	4844	4	-14	14	0	-14	multi-exon	FALSE	canonical	3	41	junction_2	4.32049379893857	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGTGTACTAATTGCAT	-77131311	True	NA	-11	True	ATTAAA	-17	NA	77132783	77012792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77132579
WTC11_00042707	chr18	-	1256	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTGCAATGTTGTT	NA	False	NA	0	True	ATTAAA	-19	NA	78978843	78976554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_78977430_78978462
WTC11_00042708	chr18	-	2312	3	NIC	ENSG00000263146.3	novel	471	2	NA	NA	-238	-20	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	30.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATTTGTTAATTGTC	NA	False	NA	-20	True	AAAACA	-27	NA	78979312	78976574	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_78977430_78977554_78978739_78979039
WTC11_00042709	chr18	-	393	2	FSM	ENSG00000263146.3	ENST00000583511.2	724	2	44	287	0	193	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGAGGGCCCGGGAGG	NA	False	NA	NA	False	NA	NA	NA	78978843	78977094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_78977430_78978785
WTC11_00042712	chr18	-	2075	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAAAGTTTTCCTTT	NA	False	NA	0	True	ATTAAA	-16	NA	79679359	79677284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79677300_79679400
WTC11_00042713	chr18	-	297	1	FSM	ENSG00000278075.1	ENST00000618070.1	349	1	-9	61	-9	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCGGCCACCATGTCT	NA	False	NA	NA	False	NA	NA	NA	79900912	79900615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79900600_79900900
WTC11_00042714	chr18	-	2476	5	FSM	ENSG00000122490.19	ENST00000357575.8	2475	5	0	-1	0	1	multi-exon	FALSE	canonical	3	101	junction_2	38.1665756913035	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCTTGGGCAGAGGGAA	-79950837	True	NA	-22	True	AATAAA	-19	NA	79951638	79902418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79919183_79919401_79943328_79943463_79950723_79951026_79951580
WTC11_00042715	chr18	-	2271	4	FSM	ENSG00000122490.19	ENST00000590381.5	1247	4	0	-1024	0	-1	multi-exon	FALSE	canonical	3	84	junction_1	47.7656315310031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGCCTTGGGCAGAGG	-79950852	True	NA	-25	True	AATAAA	-16	NA	79951653	79902421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79943328_79943463_79950723_79951026_79951580
WTC11_00042716	chr18	-	2545	6	FSM	ENSG00000122490.19	ENST00000397778.7	2544	6	0	-1	0	1	multi-exon	FALSE	canonical	2	5	junction_2	76.5584743839635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCTTGGGCAGAGGGAA	-79950852	True	NA	-22	True	AATAAA	-19	NA	79951653	79902418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79919183_79919401_79933968_79934023_79943328_79943463_79950723_79951026_79951580
WTC11_00042718	chr18	-	3473	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1188	junction_2	108	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAAGTTTATTGTATA	-79959092	True	NA	-17	True	GATAAA	-16	NA	79988563	79970811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79977597_79977702_79988239
WTC11_00042719	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-80033764	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79977597_79977702_80033850
WTC11_00042720	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	-79959070	True	NA	-8	True	AGTAAA	-21	NA	79988541	79973406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79988239
WTC11_00042723	chr18	-	997	5	FSM	ENSG00000141759.15	ENST00000585769.5	988	5	0	-9	0	0	multi-exon	FALSE	canonical	3	23	junction_2	66.6197230555637	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGAGAGGAGCAGGCCT	-79959110	True	NA	-23	True	AATAAA	-8	NA	79988581	79973524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79976717_79976788_79977597_79977702_79986601_79986751_79988239
WTC11_00042727	chr18	-	3916	3	FSM	ENSG00000178184.16	ENST00000353265.8	3836	3	-68	-12	-68	12	multi-exon	FALSE	canonical	3	28	junction_1	16.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTTCTAAGTGGA	-80246397	True	NA	31	True	AATAAA	-41	NA	80247582	80157219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_80160607_80202709_80202933_80247276
WTC11_00042728	chr18	-	590	3	FSM	ENSG00000178184.16	ENST00000470488.2	596	3	0	6	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTTCTCTGGGAAC	-80246163	False	NA	NA	False	AATAAA	-15	NA	80247348	80182855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_80183151_80202709_80202933_80247276
WTC11_00042729	chr18	+	295	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTGCTGGTGCTATAT	3014169	False	NA	NA	False	AAAACA	-8	NA	3014182	3014477	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_3014200_3014500
WTC11_00042730	chr18	+	260	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTCTCACCAT	NA	False	NA	NA	False	NA	NA	NA	3581383	3581643	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_3581400_3581600
WTC11_00042731	chr18	+	1456	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATTCTTGGGCCCCAG	NA	False	NA	NA	False	AATAGA	-1	NA	4297658	4299114	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_4297700_4299100
WTC11_00042732	chr18	+	604	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTGTTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	10567384	10567988	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_10567400_10568000
WTC11_00042733	chr18	+	320	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTTTTAAAGTAAGGG	22177930	False	NA	NA	False	NA	NA	NA	22177944	22178264	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_22177900_22178300
WTC11_00042734	chr18	+	246	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCAGTCCGACCTGGGC	NA	False	NA	NA	False	NA	NA	NA	25312530	25312776	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_25312500_25312800
WTC11_00042735	chr18	+	2434	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCAATTTTCCACTGTT	NA	False	NA	NA	False	NA	NA	NA	26167845	26170279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_26167800_26170300
WTC11_00042737	chr18	+	313	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTTTTAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	42837153	42837466	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_42837200_42837500
WTC11_00042738	chr18	+	3275	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTAGTGACAGGGTTTT	44703341	False	NA	NA	False	NA	NA	NA	44703352	44706627	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_44703400_44706600
WTC11_00042739	chr18	+	333	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTTAGTGCAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	49577039	49577372	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_49577000_49577400
WTC11_00042740	chr18	+	267	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTATGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	59399534	59399801	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_59399500_59399800
WTC11_00042741	chr18	+	226	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAACTGAAGTAATCCAG	NA	False	NA	NA	False	GATAAA	-13	NA	60015303	60015529	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_60015300_60015500
WTC11_00042742	chr18	+	328	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4871	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGGTCTTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	63754875	63755203	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_63754900_63755200
WTC11_00042743	chr18	+	270	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAGTGACAACTGAAT	NA	False	NA	NA	False	TTTAAA	-25	NA	68278336	68278606	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_68278300_68278600
WTC11_00042744	chr18	+	272	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTTAAAACACATATT	NA	False	NA	NA	False	NA	NA	NA	72310429	72310701	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_72310400_72310700
WTC11_00042752	chr18	+	1334	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	-186	-123	10	-24	multi-exon	FALSE	canonical	3	98	junction_1	1201.4364550635	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTACCCTTTAACAT	3262406	False	NA	NA	False	NA	NA	NA	3262426	3278407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
WTC11_00042757	chr18	+	691	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	45	0	2	0	multi-exon	FALSE	canonical	3	44	junction_2	105.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3602563	True	NA	8	True	AATAAA	-28	NA	3603973	3610094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553_3606641_3609732
WTC11_00042778	chr18	+	7764	44	FSM	ENSG00000101639.19	ENST00000325971.12	7764	44	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	19.9916423857203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCAGTGAGCTTGT	12989116	True	NA	23	True	AATAAA	-32	NA	12991361	13125050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116376_13116504_13117584_13117644_13124631
WTC11_00042779	chr18	+	7517	42	NIC	ENSG00000101639.19	novel	7960	45	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	18.5985165688122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTATATCCAGAAATTT	13008520	False	NA	9	True	AATAAA	-18	NA	13008531	13125036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116373_13116504_13117584_13117644_13124631
WTC11_00042786	chr18	+	3234	18	NIC	ENSG00000101773.19	novel	3260	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	62.5938741378481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22932833	False	NA	15	True	AATACA	-16	NA	22933893	23026486	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23016827_23016925_23022128_23022271_23026142
WTC11_00042791	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	78.7412332782629	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	24426620	False	NA	-12	True	NA	NA	NA	24426633	24453510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
WTC11_00042799	chr18	+	1103	3	FSM	ENSG00000186812.13	ENST00000592264.1	1104	3	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	35242378	False	NA	NA	False	AATAAA	-20	NA	35242390	35258394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35242885_35243151_35243294_35257927
WTC11_00042800	chr18	+	3903	12	NIC	ENSG00000141429.14	novel	1770	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	140.138951115793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	NA	False	NA	29	True	ATTAAA	-42	NA	35627428	35711834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_35627485_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
WTC11_00042802	chr18	+	4873	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	-25	5	-4	-5	multi-exon	FALSE	canonical	1	5	junction_7	15.4488403016753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGTGGGTTTGATATT	36827535	True	NA	7	True	AATAAA	-20	NA	36829101	37225329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
WTC11_00042826	chr18	+	5625	10	NIC	ENSG00000074657.14	novel	598	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	69.2490584684401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	58862340	False	NA	9	True	AATAAA	-14	NA	58864415	58985944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58864530_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
WTC11_00042827	chr18	+	4531	9	NNC	ENSG00000074657.14	novel	5324	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	87.8235980531429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTTAAAGCAGTCTTG	58865531	False	NA	NA	False	NA	NA	NA	58865553	58985066	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979147_58981466_58981618_58983971
WTC11_00042832	chr18	+	591	2	FSM	ENSG00000141655.17	ENST00000592013.1	575	2	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCTCTGGAAGACAAA	62324809	True	NA	NA	False	NA	NA	NA	62325309	62336786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62325428_62336313
WTC11_00042837	chr18	+	500	3	ISM	ENSG00000221887.6	ENST00000481726.1	682	6	-47	21358	9	216	5prime_fragment	FALSE	canonical	3	30	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACTCGTAGACCTTTTC	63948865	True	NA	9	True	ATTAAA	-20	NA	63949309	63960416	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_63949401_63954407_63954558_63960157
WTC11_00042853	chr18	+	8124	31	FSM	ENSG00000130856.17	ENST00000253159.12	8124	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	10.9731490466502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTAATTTTTTTCGTT	76823961	False	NA	6	True	AATAAA	-17	NA	76824159	76970727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_76824407_76849525_76849669_76851774_76851940_76868684_76868864_76871700_76871826_76875491_76875665_76878008_76878153_76880112_76880317_76881283_76881513_76895012_76895286_76899018_76899223_76904379_76904522_76905154_76905416_76908319_76908574_76910067_76910170_76910659_76910812_76912243_76912348_76913746_76913899_76915646_76915860_76919775_76920059_76923070_76923175_76925188_76925555_76927036_76927183_76927276_76927518_76927926_76928107_76937155_76937344_76947520_76947653_76955984_76956183_76959686_76959817_76960678_76960856_76968214
WTC11_00042856	chr18	+	9076	4	NNC	ENSG00000256463.10	novel	3997	3	NA	NA	1634	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3270434653114	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAAATGTGATTATTTG	78981760	False	NA	NA	False	AATAAA	-16	NA	78981908	79002677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_78982025_78992073_78994906_78995121_78995463_78996890
WTC11_00042859	chr18	+	2094	2	FSM	ENSG00000060069.18	ENST00000590599.2	2671	2	577	0	577	0	multi-exon	FALSE	canonical	3	249	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCTTCTCGTGGGTG	79735256	False	NA	17	True	AATAAA	-13	NA	79735277	79754501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79736522_79753651
WTC11_00042861	chr18	+	1630	1	FSM	ENSG00000226742.4	ENST00000590571.1	775	1	-867	12	-867	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTGGAATGTAATTA	79969075	False	NA	10	True	AATAAA	-15	NA	79969175	79970805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79969200_79970800
WTC11_00042876	chr18	-	10374	62	FSM	ENSG00000101680.16	ENST00000579014.5	10374	62	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_44	47.5510842859517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACGTTACACTAAAACCA	-7111076	True	NA	-66	True	NA	NA	NA	7117759	6941947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
WTC11_00042889	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	42.8200368467328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-12700870	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
WTC11_00042896	chr18	-	3921	3	NIC	ENSG00000175322.12	novel	826	4	NA	NA	0	2219	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTTTGTTGTTGTAC	-14131065	True	NA	-7	True	AATAAA	-17	NA	14132434	14119573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_14123208_14124349_14124477_14132274
WTC11_00042914	chr18	-	1483	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	1	4074	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	86.8058177773817	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGCTTGACTTTGTGGG	-24392536	True	NA	-5	True	AATAAA	-22	NA	24397822	24362330	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_24363362_24366891_24366967_24368286_24368373_24377412_24377536_24397654
WTC11_00042922	chr18	-	639	4	FSM	ENSG00000153339.15	ENST00000577474.2	862	4	223	0	223	0	multi-exon	FALSE	canonical	3	151	junction_3	26.4112770527204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGCAGTGGCGAGAAC	-31890969	False	NA	NA	False	NA	NA	NA	31890984	31871065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31871121_31873429_31873539_31874479_31874705_31890734
WTC11_00042930	chr18	-	1357	2	NIC	ENSG00000268573.1	novel	4382	2	NA	NA	0	-3072	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCCTCCACTTGTCTA	-35289492	True	NA	NA	False	AGTAAA	-35	NA	35290201	35283938	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_35285178_35290083
WTC11_00042938	chr18	-	4203	9	NNC	ENSG00000134779.15	novel	1239	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	2	3	junction_1	440.444076330923	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-36825179	True	NA	-4	True	AATAAA	-16	NA	36829011	36786572	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36787080_36794223_36794833_36794864_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00042958	chr18	-	2464	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	14	-9	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAAATCCTTGACCTT	-47929811	True	NA	-29	True	AATAAA	-27	NA	47931127	47841233	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
WTC11_00042959	chr18	-	1752	12	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	-23	-272	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	125.48161763237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCAAATTACTGAGCT	-47928864	True	NA	-7	True	AATAAA	-24	NA	47930878	47845183	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47920071_47920170_47930360_47930447_47930799
WTC11_00042961	chr18	-	827	6	FSM	ENSG00000265681.8	ENST00000580387.5	827	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	5926.73837451933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCATGGTCGGATTA	-49315686	True	NA	NA	False	NA	NA	NA	49492433	49489476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492257
WTC11_00042966	chr18	-	2108	11	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	51.9673936233096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-50275928	False	16	-57	True	ATTAAA	-22	NA	50275964	50269030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50269819_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834
WTC11_00042967	chr18	-	4504	17	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	45.4021957068158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-50281513	False	7686	-57	True	ATTAAA	-22	NA	50281523	50269030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273427_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
WTC11_00042974	chr18	-	6762	20	NIC	ENSG00000196628.20	novel	8041	20	NA	NA	3	-1123	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	38.6094874451296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACTGTTTCTGACACT	-55582617	True	NA	-17	True	AATAAA	-12	NA	55588189	55223457	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257389_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
WTC11_00042990	chr18	-	3161	27	NIC	ENSG00000197563.11	novel	4456	30	NA	NA	38	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	41.9563029942671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCATATTTCTTTAGTA	-62183368	True	NA	-6	True	AATAAA	-18	NA	62186937	62045340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
WTC11_00042991	chr18	-	3569	29	NIC	ENSG00000197563.11	novel	4456	30	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	41.0695030604542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCATATTTCTTTAGTA	-62183417	True	NA	-6	True	AATAAA	-18	NA	62186986	62045340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_62045980_62072672_62072726_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
WTC11_00042992	chr18	-	1738	13	NIC	ENSG00000197563.11	novel	1622	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	45.1801179232144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGGATGTGATTGAAT	-62183428	True	NA	NA	False	ATTAAA	-23	NA	62186997	62136732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_62137113_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
WTC11_00043004	chr18	-	5914	4	FSM	ENSG00000166347.19	ENST00000583418.1	5913	4	0	-1	0	0	multi-exon	FALSE	canonical	3	2386	junction_3	29.9369708257569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	-74277511	True	NA	-9	True	AATATA	-17	NA	74291957	74253295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74253666_74255740_74260945_74263348_74263478_74291746
WTC11_00043007	chr18	-	8157	6	NNC	ENSG00000101493.11	novel	8678	7	NA	NA	338	0	intron_retention	FALSE	canonical	1	2	junction_5	21.0618137870412	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGAGATTTGTAAGACA	-76494872	False	NA	-17	True	AATAAA	-16	NA	76494904	76358196	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_76362558_76370527_76370596_76371466_76371572_76378854_76380304_76441244_76443212_76494697
WTC11_00043020	chr18	+	442	3	NIC	ENSG00000266835.6	novel	623	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466171	True	NA	3	True	AATAAA	-19	NA	3466282	3478978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_3466358_3467126_3467271_3478755
WTC11_00043022	chr18	+	454	2	FSM	ENSG00000262001.2	ENST00000693339.1	610	2	148	8	144	-8	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATTCATCTCATCG	3603887	False	NA	0	True	AATAAA	-20	NA	3604115	3610086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3609732
WTC11_00043040	chr18	+	1709	5	FSM	ENSG00000141391.14	ENST00000587735.1	1694	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	13	junction_2	6.05702071979286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	12421247	True	NA	NA	False	ATTAAA	-26	NA	12421270	12432238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
WTC11_00043045	chr18	+	525	3	FSM	ENSG00000101752.12	ENST00000578260.1	544	3	19	0	19	0	multi-exon	FALSE	canonical	3	58	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGGAAGCTGGAGCA	21803739	False	NA	NA	False	AAGAAA	-20	NA	21803751	21819558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21804015_21815615_21815814_21819494
WTC11_00043047	chr18	+	813	5	NNC	ENSG00000134508.13	novel	604	4	NA	NA	-320	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	31.5465925259766	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTCGTTGTGTGTGTG	23136088	False	NA	NA	False	GATAAA	-31	NA	23136103	23214227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_23136417_23136523_23136608_23188837_23188910_23194447_23194541_23213976
WTC11_00043081	chr18	+	3611	18	FSM	ENSG00000167216.19	ENST00000683218.1	3689	18	176	-98	-11	98	multi-exon	FALSE	canonical	2	4	junction_17	12.2990420759569	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCGTGGCTTGTTAGAAC	46917097	False	NA	NA	False	NA	NA	NA	46917777	47102341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46917927_46946056_46946547_46946853_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
WTC11_00043087	chr18	+	687	3	Fusion	ENSG00000267057.6_ENSG00000267327.2	novel	518	3	NA	NA	46	-4	multi-exon	TRUE	canonical	2	5	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACCAAGCATATGCAC	55892406	False	NA	-1	True	AATAAA	-14	NA	55893083	56096304	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr18_+_55893443_56050079_56050178_56096074
WTC11_00043101	chr18	+	3153	3	NNC	ENSG00000256463.10	novel	838	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	24.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAAATGTGATTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	78994803	79002677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_78994906_78995121_78995463_78999967
WTC11_00043103	chr18	+	1406	7	ISM	ENSG00000131196.18	ENST00000590313.5	1919	9	12	59756	7	-16	5prime_fragment	FALSE	canonical	0	0	junction_1	33.728079300982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTAAGCCTGTAGTC	79399668	True	NA	3	True	AATAAA	-3	NA	79400342	79467985	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_79400480_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
WTC11_00043117	chr18	-	3352	4	FSM	ENSG00000198081.11	ENST00000615385.4	3350	4	-10	8	-10	-6	multi-exon	FALSE	canonical	3	10	junction_3	65.0589476295664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATCATTCCTCTTTTC	-5295696	False	742	-8	True	TATAAA	-11	NA	5295712	5289027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
WTC11_00043118	chr18	-	4034	21	NIC	ENSG00000082397.18	novel	4270	22	NA	NA	118	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	36.5199945235483	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTAAGTTTGTATGTTTA	-5544152	False	NA	-5	True	AATAAA	-20	NA	5544163	5392385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5394676_5394794_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5400968_5401044_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
WTC11_00043119	chr18	-	3947	19	NIC	ENSG00000082397.18	novel	3370	20	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.1131610618315	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTAAGTTTGTATGTTTA	-5544221	False	132	-5	True	AATAAA	-20	NA	5544232	5392385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5394676_5394794_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
WTC11_00043129	chr18	-	8423	35	NIC	ENSG00000154864.14	novel	7093	38	NA	NA	7	560	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	18.4529936806619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTAGAAGCTTCCAGAT	-11148340	True	NA	NA	False	NA	NA	NA	11149562	10712491	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_10714931_10715649_10715817_10718199_10718260_10731406_10731522_10736603_10736711_10742493_10742616_10744141_10744232_10748470_10748631_10750090_10750188_10752635_10752880_10757968_10758135_10759481_10759584_10759704_10759910_10760910_10761112_10762499_10762626_10762921_10763099_10770147_10770309_10773411_10773630_10784783_10784958_10787035_10787185_10789078_10789366_10791200_10791325_10794771_10795003_10797373_10797523_10800336_10800476_10801389_10801429_10803874_10803995_10807111_10807275_10855352_10855567_10857000_10857212_10871252_10871416_10911185_10911229_10979534_10979661_11066126_11066223_11148524
WTC11_00043131	chr18	-	5238	13	ISM	ENSG00000154864.14	ENST00000686869.1	7093	38	-912	79209	12	5236	5prime_fragment	FALSE	canonical	3	22	junction_3	20.2709082732428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTCTGTGTGACCAGGC	-11148335	True	NA	NA	False	AATAAA	-15	NA	11149557	10792260	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_10795003_10797373_10797523_10800336_10800476_10801389_10801429_10803874_10803995_10807111_10807275_10855352_10855567_10857000_10857212_10871252_10871416_10911185_10911229_10979534_10979661_11066126_11066223_11148524
WTC11_00043138	chr18	-	4287	11	NIC	ENSG00000141446.11	novel	4488	12	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	62.9790441337434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAATGGTGTGTTGTCA	-21595709	True	NA	13	True	AATAAA	-41	NA	21600692	21529284	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_21530491_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
WTC11_00043174	chr18	-	844	7	NIC	ENSG00000134779.15	novel	1239	7	NA	NA	-2	-231	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	383.550264705365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAACCAAGTGAACAGACT	-36828707	False	NA	-19	True	AATAAA	-5	NA	36828775	36786803	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_36786983_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00043175	chr18	-	3787	8	NNC	ENSG00000134779.15	novel	3835	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	363.960358908965	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-36828918	False	NA	-14	True	ACTAAA	-20	NA	36828986	36794107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36794831_36794862_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
WTC11_00043179	chr18	-	4531	10	NIC	ENSG00000267313.7	novel	1713	6	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	9.2135166407235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGATTAAAAAAATGAGTT	-41631389	True	NA	NA	False	AATAAA	-19	NA	41632124	41465796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_41467781_41480755_41481268_41481881_41481958_41482444_41482578_41501119_41501277_41516419_41516556_41520383_41521497_41525354_41525527_41594345_41594469_41631999
WTC11_00043193	chr18	-	1876	10	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	341	-12	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	102.904486458722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTGAAATCCTTGAC	-47895374	False	NA	-32	True	AATAAA	-24	NA	47895384	47841236	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47895266
WTC11_00043195	chr18	-	1036	8	FSM	ENSG00000215472.10	ENST00000577910.1	1012	8	0	-24	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6413.26913356923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAAGTTCCTTTTTCGTT	-49314839	False	NA	-140	True	TTTAAA	-30	NA	49491586	49482151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49488499_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
WTC11_00043196	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	5487.52845641824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315732	True	NA	-24	True	AATAAA	-18	NA	49492479	49488483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
WTC11_00043202	chr18	-	2277	14	NIC	ENSG00000154832.16	novel	2320	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	107.692967030949	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50279978	True	NA	-15	True	AATAAA	-17	NA	50287664	50282346	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284719_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
WTC11_00043215	chr18	-	4122	31	NIC	ENSG00000197563.11	novel	3646	30	NA	NA	2	193	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.1754851620765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATCATAAGAATTCATAT	-62183418	True	NA	97	True	NA	NA	NA	62186987	62044993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_62045980_62056721_62056845_62058815_62059021_62072672_62072726_62074778_62074822_62082672_62082707_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
WTC11_00043226	chr18	-	8175	9	NIC	ENSG00000166342.19	novel	6721	11	NA	NA	-44	0	intron_retention	FALSE	canonical	3	37	junction_5	14.4287040305081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGTACTCTTTATT	-72867597	False	NA	-2	True	AATAAA	-23	NA	72867619	72743755	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
WTC11_00043227	chr18	-	3507	6	NNC	ENSG00000166342.19	novel	575	4	NA	NA	-95	3904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.1987951588608	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTGTTTATTGTATTA	-72868219	False	NA	-8	True	AATAAA	-16	NA	72868241	72855075	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_72857302_72858825_72859075_72864807_72864946_72865187_72865242_72867263_72867982_72868119
WTC11_00043234	chr18	-	2970	7	NNC	ENSG00000122490.19	novel	2544	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	6	junction_2	73.6990878882199	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGCCTTGGGCAGAGG	-79950872	True	NA	-25	True	AATAAA	-16	NA	79951673	79902421	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_79904184_79915386_79915695_79916325_79916480_79919183_79919401_79943328_79943463_79950723_79951026_79951580
WTC11_00043237	chr19	+	776	1	FSM	ENSG00000282542.1	ENST00000632280.1	776	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTCCTGTGATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	68402	69178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_68400_69200
WTC11_00043238	chr19	+	1114	2	FSM	ENSG00000141933.9	ENST00000359315.6	1114	2	-3	3	-3	-3	multi-exon	FALSE	canonical	3	214	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGCTGGTGTGTATGCGA	505585	True	NA	2	True	AATAAA	-15	NA	507493	519651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_507845_518888
WTC11_00043239	chr19	+	4483	9	NNC	ENSG00000099804.9	novel	1418	5	NA	NA	-597	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	850.32213564919	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	531008	True	NA	20	True	AATAAA	-20	NA	531162	542092	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_532109_535836_535924_536242_536341_537012_537148_538677_540050_540087_540724_540760_540798_540834_541253_541338
WTC11_00043241	chr19	+	1418	5	FSM	ENSG00000099804.9	ENST00000215574.9	1418	5	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_4	107.850301344039	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGAAGCTGTGCTTG	520644	True	NA	15	True	AATAAA	-15	NA	531759	542087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541338
WTC11_00043245	chr19	+	1772	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	23	0	-10	0	multi-exon	FALSE	canonical	3	82	junction_1	2649.90713737948	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	571238	True	NA	25	True	AATAAA	-24	NA	571299	583493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00043246	chr19	+	1615	7	FSM	ENSG00000172270.22	ENST00000346916.9	1605	7	-10	0	-10	0	multi-exon	FALSE	canonical	2	4	junction_1	2836.41767414854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	571238	True	NA	25	True	AATAAA	-24	NA	571299	583493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_571580_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00043247	chr19	+	1610	8	FSM	ENSG00000172270.22	ENST00000679472.1	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	2639.50122066226	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCACCCACCGCC	448918	True	NA	-26	True	NA	NA	NA	572528	583442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582517_582583_582749
WTC11_00043248	chr19	+	1630	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2708.20634971803	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	448918	True	NA	-6	True	NA	NA	NA	572528	583462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
WTC11_00043249	chr19	+	579	4	FSM	ENSG00000172270.22	ENST00000613627.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	3507.02545693007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCTTCATCTACGAGAA	448960	True	NA	NA	False	NA	NA	NA	572570	581542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_580378_580462_580645_580783_581314
WTC11_00043250	chr19	+	969	4	FSM	ENSG00000172270.22	ENST00000572899.6	946	4	-23	0	0	0	multi-exon	FALSE	canonical	3	7400	junction_3	197.001410034435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCGTCTGCCCTCCTG	448960	True	NA	NA	False	NA	NA	NA	572570	581591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580783_581314
WTC11_00043251	chr19	+	1622	8	FSM	ENSG00000172270.22	ENST00000353555.9	1598	8	-24	0	0	0	multi-exon	FALSE	canonical	3	7277	junction_7	314.586219971439	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448961	True	NA	25	True	AATAAA	-24	NA	572571	583493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00043252	chr19	+	1589	8	FSM	ENSG00000172270.22	ENST00000680326.1	1575	8	-14	0	0	0	multi-exon	FALSE	canonical	1	290	junction_1	2577.61547772751	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448985	True	NA	25	True	AATAAA	-24	NA	572595	583493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579508_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00043254	chr19	+	1886	7	FSM	ENSG00000172270.22	ENST00000571735.3	2141	7	255	0	255	0	multi-exon	FALSE	canonical	3	7277	junction_6	328.062705726952	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTCCTGGCTCCTGTC	579064	False	NA	24	True	AATAAA	-23	NA	579104	583492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00043256	chr19	+	1290	3	FSM	ENSG00000070388.12	ENST00000586042.6	1288	3	-9	7	7	-7	multi-exon	FALSE	canonical	2	3	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCAACTTTGTGGTCT	639790	True	NA	-3	True	AATAAA	-8	NA	639885	644364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_640140_643234_643339_643432
WTC11_00043257	chr19	+	2148	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	-4	0	-4	0	multi-exon	FALSE	canonical	2	13	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	680630	False	NA	8	True	AATAAA	-15	NA	680702	683392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_680880_681332_681561_681649
WTC11_00043258	chr19	+	568	2	FSM	ENSG00000070404.10	ENST00000591573.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGAGTCTAATTTATA	680510	True	NA	NA	False	NA	NA	NA	680750	681771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_680880_681332
WTC11_00043259	chr19	+	2775	8	FSM	ENSG00000099864.18	ENST00000264560.11	2755	8	-20	0	-16	0	multi-exon	FALSE	canonical	3	12	junction_3	3.54562104171167	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	708782	True	NA	21	True	AATAAA	-18	NA	708918	748329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_746284
WTC11_00043261	chr19	+	538	1	FSM	ENSG00000267530.4	ENST00000666859.1	603	1	16	49	-3	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTGTTTTTATTGTT	782491	True	NA	NA	False	GATAAA	-14	NA	782792	783330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_782800_783300
WTC11_00043263	chr19	+	3320	14	FSM	ENSG00000011304.22	ENST00000349038.8	3155	14	-202	37	148	0	multi-exon	FALSE	canonical	3	576	junction_8	325.231788077874	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACCTGGACTTCGAAT	NA	False	NA	-10	True	NA	NA	NA	797222	812275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043264	chr19	+	3691	14	FSM	ENSG00000011304.22	ENST00000635647.1	3691	14	0	0	0	0	multi-exon	TRUE	canonical	3	1164	junction_7	227.640690614988	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTGGCTTCCTCTTTC	NA	False	NA	42	True	AATAAA	-30	NA	797074	812327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043267	chr19	+	4664	12	FSM	ENSG00000011304.22	ENST00000586944.5	4661	12	-3	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_1	116.930720464854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCGGCTGCGACACC	751773	True	NA	NA	False	NA	NA	NA	797424	811289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043268	chr19	+	3206	15	FSM	ENSG00000011304.22	ENST00000356948.11	3206	15	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_8	219.360259548961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751800	True	NA	27	True	AATAAA	-15	NA	797451	812312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043269	chr19	+	3185	15	FSM	ENSG00000011304.22	ENST00000394601.8	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	460.163790715561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751800	True	NA	27	True	AATAAA	-15	NA	797451	812312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805512_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043271	chr19	+	3622	15	FSM	ENSG00000011304.22	ENST00000679114.1	3233	15	-442	53	-442	0	multi-exon	FALSE	canonical	3	63	junction_1	464.53516375765	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCTAGCCCTGTGT	797697	True	NA	27	True	ATTAAA	-18	NA	797985	812222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_798546_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
WTC11_00043278	chr19	+	1907	5	FSM	ENSG00000116014.10	ENST00000234371.10	1624	5	-301	18	-255	-18	multi-exon	TRUE	canonical	3	10	junction_1	1.6393596310755	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGACGTTTTCTCATT	NA	False	NA	39	True	ATTAAA	-39	NA	917031	920987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_917747_918543_918669_919489_919626_919873_920107_920289
WTC11_00043281	chr19	+	5962	9	FSM	ENSG00000116017.11	ENST00000263620.8	5948	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	28	junction_1	55.9998604908977	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	925007	True	NA	28	True	ATTAAA	-35	NA	926020	975939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_926060_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
WTC11_00043283	chr19	+	840	3	FSM	ENSG00000065268.11	ENST00000586317.2	831	3	-9	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCACGTCTGGTCTCACC	974979	True	NA	NA	False	NA	NA	NA	984331	990258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_985864_985976_989761
WTC11_00043284	chr19	+	1534	10	FSM	ENSG00000065268.11	ENST00000585809.6	1521	10	-13	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_7	87.0708523751395	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	974979	True	NA	19	True	NA	NA	NA	984331	994557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
WTC11_00043285	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	465.81541408588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	974979	True	NA	19	True	NA	NA	NA	984331	994557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
WTC11_00043286	chr19	+	1397	9	FSM	ENSG00000065268.11	ENST00000607440.5	1397	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	481.867136771123	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	975005	True	NA	19	True	NA	NA	NA	984357	994557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
WTC11_00043288	chr19	+	563	5	FSM	ENSG00000064666.15	ENST00000562015.5	563	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1367.48919099933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGCCCAGAGAGGGGC	976368	True	NA	NA	False	NA	NA	NA	1026585	1032695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1026976_1027075_1031070_1031193_1032391_1032459_1032558
WTC11_00043289	chr19	+	2171	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	-22	0	0	0	multi-exon	FALSE	canonical	3	2356	junction_6	139.610967413818	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	976368	True	NA	28	True	AATAAA	-20	NA	1026585	1039065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
WTC11_00043291	chr19	+	1515	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	-23	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	1192.54599877056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	976390	True	NA	NA	False	AAGAAA	-3	NA	1026607	1038309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
WTC11_00043292	chr19	+	2119	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	-10	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	909.023545105161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976390	True	NA	31	True	AATAAA	-23	NA	1026607	1039068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
WTC11_00043293	chr19	+	2215	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	-21	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	978.693800713765	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976390	True	NA	31	True	AATAAA	-23	NA	1026607	1039068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
WTC11_00043295	chr19	+	623	5	FSM	ENSG00000064666.15	ENST00000562075.6	623	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	1092.33725904594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGACCACCTCCGGCTT	976473	False	NA	NA	False	NA	NA	NA	1026690	1036677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415
WTC11_00043296	chr19	+	2373	1	FSM	ENSG00000064666.15	ENST00000564572.1	2266	1	-107	0	-107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGCCAAGAGAGTT	1036580	False	NA	27	True	AATAAA	-19	NA	1036691	1039064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1036700_1039100
WTC11_00043297	chr19	+	1063	6	FSM	ENSG00000064687.13	ENST00000526885.5	1076	6	13	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	2.31516738055804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCCCTGGGGTTGGCAC	1038598	True	NA	NA	False	NA	NA	NA	1040115	1042744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314
WTC11_00043298	chr19	+	6813	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	2	0	2	0	multi-exon	TRUE	canonical	3	23	junction_12	22.0315978618852	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1038591	True	NA	20	True	AATAAA	-33	NA	1040108	1065572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
WTC11_00043299	chr19	+	4269	23	FSM	ENSG00000180448.11	ENST00000313093.7	4272	23	3	0	3	0	multi-exon	FALSE	canonical	3	28	junction_2	59.6601255321542	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1066799	True	NA	14	True	AATAAA	-16	NA	1067169	1086628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1067496_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
WTC11_00043300	chr19	+	3750	22	FSM	ENSG00000180448.11	ENST00000543365.5	3750	22	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	45.7157737853043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1069274	True	NA	14	True	AATAAA	-16	NA	1071220	1086628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1071359_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
WTC11_00043301	chr19	+	4195	13	FSM	ENSG00000180448.11	ENST00000590577.2	3218	13	-1005	28	-1005	0	multi-exon	FALSE	canonical	3	192	junction_10	14.8218588577816	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	1076467	False	NA	-14	True	NA	NA	NA	1076481	1086600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
WTC11_00043303	chr19	+	851	7	FSM	ENSG00000167468.19	ENST00000354171.13	851	7	0	0	0	0	multi-exon	FALSE	canonical	3	3170	junction_1	180.753054377144	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073097	True	NA	13	True	AATAAA	-13	NA	1103993	1106779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
WTC11_00043304	chr19	+	826	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	-14	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1392.03930978978	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073097	True	NA	13	True	AATAAA	-13	NA	1103993	1106779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
WTC11_00043305	chr19	+	824	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	-21	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	1272.86317672665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	1073155	True	NA	22	True	AATAAA	-22	NA	1104051	1106788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
WTC11_00043306	chr19	+	1232	7	NIC	ENSG00000167468.19	novel	536	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	358	junction_1	1198.14323944269	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073518	False	NA	13	True	AATAAA	-13	NA	1104414	1106779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1104930_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
WTC11_00043307	chr19	+	536	6	FSM	ENSG00000167468.19	ENST00000587648.5	536	6	0	0	0	0	multi-exon	FALSE	canonical	3	3397	junction_5	117.711511756497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAGCTCCACAAGTGT	1105129	False	NA	NA	False	NA	NA	NA	1105151	1106564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
WTC11_00043309	chr19	+	3293	10	FSM	ENSG00000118046.17	ENST00000326873.12	3293	10	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_8	40.2188457760234	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCGTCTGGGTTTTGT	1203666	True	NA	17	True	AATAAA	-21	NA	1205777	1228431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1226453_1226664_1227592
WTC11_00043310	chr19	+	2072	9	FSM	ENSG00000118046.17	ENST00000652231.1	2072	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	184.299348886533	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCAGGGTGGATGCTT	1204074	False	NA	NA	False	CATAAA	-14	NA	1206185	1223873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1223637
WTC11_00043314	chr19	+	3554	3	FSM	ENSG00000118046.17	ENST00000585465.2	3554	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	297.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTGAGGGGTGT	1223127	False	NA	12	True	AATAAA	-13	NA	1223147	1228095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1223173_1223637_1226664_1227592
WTC11_00043315	chr19	+	726	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	-22	0	-22	0	multi-exon	FALSE	canonical	3	958	junction_4	330.846924573888	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222530	True	NA	28	True	ATTAAA	-16	NA	1241723	1244825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
WTC11_00043316	chr19	+	1022	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	-27	0	-22	0	multi-exon	FALSE	canonical	3	1685	junction_3	37.6769897358528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222530	True	NA	28	True	ATTAAA	-16	NA	1241723	1244825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
WTC11_00043318	chr19	+	1393	3	FSM	ENSG00000099624.8	ENST00000588538.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222623	True	NA	28	True	ATTAAA	-16	NA	1241816	1244825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1242610_1244096_1244186_1244314
WTC11_00043319	chr19	+	728	2	FSM	ENSG00000099624.8	ENST00000589478.1	640	2	-88	0	-88	0	multi-exon	FALSE	canonical	3	1685	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1243948	False	NA	28	True	ATTAAA	-16	NA	1243968	1244825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1244186_1244314
WTC11_00043320	chr19	+	3790	8	FSM	ENSG00000167470.14	ENST00000300952.7	3793	8	0	3	0	-3	multi-exon	FALSE	canonical	3	46	junction_1	21.8351897221911	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	1245920	True	NA	7	True	AATAAA	-14	NA	1248552	1259140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254901_1255062_1255421_1255695_1256994
WTC11_00043321	chr19	+	3886	9	NNC	ENSG00000167470.14	novel	3892	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	31.3677780532826	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	1245950	True	NA	7	True	AATAAA	-14	NA	1248582	1259140	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1253953_1254083_1254166_1254479_1254904_1255062_1255421_1255695_1256994
WTC11_00043322	chr19	+	3892	9	FSM	ENSG00000167470.14	ENST00000682408.1	3892	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	26.0480325552622	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGACTCCCGCCTGCTCG	1245950	True	NA	10	True	AATAAA	-17	NA	1248582	1259143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1253953_1254083_1254166_1254479_1254901_1255062_1255421_1255695_1256994
WTC11_00043323	chr19	+	518	3	FSM	ENSG00000167470.14	ENST00000591302.1	523	3	5	0	5	0	multi-exon	FALSE	canonical	3	64	junction_2	29	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCAGCTCGCGGCCC	1251047	False	NA	NA	False	NA	NA	NA	1251265	1254237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1251650_1251838_1251902_1254166
WTC11_00043324	chr19	+	536	2	FSM	ENSG00000167470.14	ENST00000590136.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCTGCTGCGCGGGGGG	1253653	False	NA	NA	False	NA	NA	NA	1253683	1254303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1254083_1254166
WTC11_00043325	chr19	+	738	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	31	0	-31	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACGCTGGGGCGGGCAGG	1261527	False	NA	NA	False	NA	NA	NA	1261820	1264667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1262144_1264252
WTC11_00043327	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	376.4781002927	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1269225	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
WTC11_00043333	chr19	+	1338	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	-10	0	0	0	multi-exon	FALSE	canonical	3	775	junction_6	94.1855438306042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1269286	False	NA	NA	False	ATTAAA	-18	NA	1269326	1273172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
WTC11_00043334	chr19	+	3533	4	FSM	ENSG00000099622.14	ENST00000593093.5	3528	4	-5	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	45.6143252352445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGAGTCTGTGGTTCA	1269286	False	NA	14	True	AATAAA	-20	NA	1269326	1274807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271468_1271550_1271633_1271980
WTC11_00043335	chr19	+	1180	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	-112	5	-28	0	multi-exon	FALSE	canonical	3	232	junction_6	291.282795006273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCGAGTCTGTGGTT	1269197	False	NA	12	True	AATAAA	-18	NA	1269237	1274805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
WTC11_00043336	chr19	+	3039	6	FSM	ENSG00000099622.14	ENST00000587169.5	3028	6	-11	0	-3	0	multi-exon	FALSE	canonical	3	86	junction_2	403.349277921754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1269283	False	NA	17	True	AATAAA	-23	NA	1269323	1274810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1274441_1274648
WTC11_00043341	chr19	+	972	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	-109	75	-28	0	multi-exon	FALSE	canonical	3	232	junction_6	333.559773427462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCGAGTCTGTGGTT	1269197	False	NA	12	True	AATAAA	-18	NA	1269237	1274805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
WTC11_00043343	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1272897	False	NA	17	True	AATAAA	-23	NA	1272924	1274810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1273716_1274306_1274441_1274648
WTC11_00043345	chr19	+	881	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	248	junction_1	117.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1275491	False	NA	11	True	AATAAA	-19	NA	1275518	1279228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1275831_1277182_1277300_1278776
WTC11_00043346	chr19	+	793	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	-141	16	-141	0	multi-exon	FALSE	canonical	3	166	junction_1	158.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1275670	False	NA	11	True	AATAAA	-19	NA	1275879	1279228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1276104_1277182_1277300_1278776
WTC11_00043347	chr19	+	758	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	-7	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	237.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	1276037	False	NA	NA	False	NA	NA	NA	1276092	1278836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1276674_1277182_1277300_1278776
WTC11_00043348	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1276037	False	NA	27	True	AATAAA	-35	NA	1276092	1279244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1277300_1278776
WTC11_00043349	chr19	+	2364	4	FSM	ENSG00000099617.4	ENST00000215368.4	2424	4	60	0	60	0	multi-exon	FALSE	canonical	3	14	junction_3	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGTCTGTATGTGGG	1285505	False	NA	NA	False	AATAAA	-19	NA	1285932	1301431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1286309_1295544_1295859_1298550_1298617_1299823
WTC11_00043350	chr19	+	1227	1	ISM	ENSG00000099617.4	ENST00000215368.4	2424	4	14332	0	14332	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGTCTGTATGTGGG	1300194	False	NA	NA	False	AATAAA	-19	NA	1300204	1301431	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_1300200_1301400
WTC11_00043351	chr19	+	1535	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	-22	0	-9	0	multi-exon	FALSE	canonical	3	28	junction_1	118.412649474436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	1351167	True	NA	NA	False	NA	NA	NA	1354949	1359894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
WTC11_00043353	chr19	+	2709	15	NIC	ENSG00000160953.17	novel	2793	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_5	138.902329508389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	1351185	True	NA	17	True	NA	NA	NA	1354967	1376917	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00043354	chr19	+	4240	14	FSM	ENSG00000160953.17	ENST00000591337.7	4232	14	-9	1	-9	0	multi-exon	FALSE	canonical	3	142	junction_1	91.7181171729527	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	1351167	True	NA	20	True	ATTAAA	-13	NA	1354949	1378428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00043356	chr19	+	4089	13	FSM	ENSG00000160953.17	ENST00000591806.6	4067	13	-24	2	0	0	multi-exon	FALSE	canonical	3	305	junction_2	61.3914466536033	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	1352507	False	NA	21	True	ATTAAA	-14	NA	1356289	1378429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00043361	chr19	+	1461	2	FSM	ENSG00000160953.17	ENST00000591627.5	1461	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	NA	False	NA	17	True	NA	NA	NA	1372098	1376917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1373161_1376518
WTC11_00043364	chr19	+	966	8	FSM	ENSG00000115286.21	ENST00000233627.14	758	8	-211	3	169	0	multi-exon	FALSE	canonical	3	1158	junction_1	204.512261994538	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	1383679	False	NA	22	True	AATAAA	-18	NA	1383695	1395581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
WTC11_00043366	chr19	+	2822	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	-4	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	220.897915084975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	1361014	True	NA	22	True	AATAAA	-18	NA	1383899	1395581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
WTC11_00043368	chr19	+	1720	7	FSM	ENSG00000115286.21	ENST00000540530.5	1707	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	11	junction_6	644.433278159966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	1364905	False	NA	30	True	AATAAA	-26	NA	1387790	1395589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
WTC11_00043369	chr19	+	3743	1	FSM	ENSG00000115286.21	ENST00000591358.1	3743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1391824	False	NA	25	True	AATAAA	-21	NA	1391841	1395584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1391800_1395600
WTC11_00043370	chr19	+	2201	12	FSM	ENSG00000071626.17	ENST00000233078.9	2184	12	-17	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_4	95.4866612639632	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1396290	True	NA	33	True	AATAAA	-24	NA	1407568	1435684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
WTC11_00043371	chr19	+	2290	13	FSM	ENSG00000071626.17	ENST00000336761.10	2290	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	450.078349660738	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1396290	True	NA	33	True	AATAAA	-24	NA	1407568	1435684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1433738_1433828_1434736
WTC11_00043372	chr19	+	2157	12	FSM	ENSG00000071626.17	ENST00000592522.5	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_11	276.946783085049	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCCGTTTTTTCCC	1396334	True	NA	36	True	AATAAA	-27	NA	1407612	1435687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434739
WTC11_00043374	chr19	+	2089	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	-3	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	277.981181359607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	1407592	True	NA	32	True	AATAAA	-23	NA	1407676	1435683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
WTC11_00043376	chr19	+	3414	10	FSM	ENSG00000071626.17	ENST00000589484.5	3414	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	452.431073803745	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCCGTTTTTTCCC	1415959	False	NA	36	True	AATAAA	-27	NA	1415969	1435687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434739
WTC11_00043377	chr19	+	1720	1	FSM	ENSG00000071626.17	ENST00000589874.2	3642	1	1922	0	1922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1433953	False	NA	33	True	AATAAA	-24	NA	1433964	1435684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1434000_1435700
WTC11_00043378	chr19	+	534	4	FSM	ENSG00000115268.10	ENST00000233609.8	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	9135.83464532205	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307558	True	NA	29	True	AATAAA	-17	NA	1438357	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438810_1438893_1440018_1440254_1440348
WTC11_00043379	chr19	+	565	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	-15	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	8198.03368023224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	1307585	True	NA	25	True	AATAAA	-13	NA	1438384	1440490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
WTC11_00043380	chr19	+	889	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	-16	0	0	0	multi-exon	FALSE	canonical	3	19200	junction_2	653	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307585	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438893_1440018_1440254_1440348
WTC11_00043381	chr19	+	732	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	-21	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8621.60954738151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307585	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
WTC11_00043382	chr19	+	512	4	FSM	ENSG00000115268.10	ENST00000592588.7	501	4	-11	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2468.09737787363	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGCAGCTTGTTCT	1307585	True	NA	30	True	AATAAA	-18	NA	1438384	1440495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440018_1440254_1440348
WTC11_00043384	chr19	+	652	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	-23	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	8870.42922674358	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307596	True	NA	29	True	AATAAA	-17	NA	1438395	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
WTC11_00043385	chr19	+	572	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	-2	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2882.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307619	True	NA	29	True	AATAAA	-17	NA	1438418	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440018
WTC11_00043386	chr19	+	1626	3	FSM	ENSG00000115268.10	ENST00000592700.2	1602	3	-24	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2229.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307596	True	NA	29	True	AATAAA	-17	NA	1438395	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1440254_1440348
WTC11_00043387	chr19	+	470	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	-3	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8176.43227004704	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307619	True	NA	29	True	AATAAA	-17	NA	1438418	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
WTC11_00043389	chr19	+	1435	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	-77	2	-62	-2	multi-exon	FALSE	canonical	3	228	junction_4	13.0072095393286	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTGCCACGTGTGC	1491068	False	NA	25	True	AATAAA	-15	NA	1491103	1497925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
WTC11_00043390	chr19	+	1026	3	FSM	ENSG00000115255.12	ENST00000591735.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	11.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTCCAGGATGGGCA	1489261	True	NA	NA	False	NA	NA	NA	1491165	1496181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1491385_1495293_1495388_1495468
WTC11_00043391	chr19	+	2527	1	FSM	ENSG00000267244.5	ENST00000590823.2	2397	1	-101	-29	-44	29	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCACTAAAAAAAAGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1822044	1824571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1822000_1824600
WTC11_00043392	chr19	+	1448	2	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	1901876	True	NA	13	True	AATAAA	-15	NA	1905358	1913447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1912080
WTC11_00043393	chr19	+	2143	3	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	1901876	True	NA	13	True	AATAAA	-15	NA	1905358	1913447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1906020_1906179_1911543
WTC11_00043395	chr19	+	2533	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	-40	8	-13	0	multi-exon	FALSE	canonical	3	183	junction_5	37.1797435888594	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGAGCCAGGGACCTG	1901876	True	NA	4	True	AATAAA	-13	NA	1905358	1926005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
WTC11_00043396	chr19	+	6615	8	NNC	ENSG00000227500.10	novel	2501	7	NA	NA	-13	0	intron_retention	FALSE	canonical	1	1	junction_2	124.38042368443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGAGCCAGGGACCTG	1901876	True	NA	4	True	AATAAA	-13	NA	1905358	1926005	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1914978_1915027_1915431_1915545_1917693_1917823_1918126_1918284_1918888_1920852_1920961_1923188_1924107
WTC11_00043397	chr19	+	1607	2	FSM	ENSG00000213638.6	ENST00000329478.4	1599	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	38	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	1901908	True	NA	13	True	AATAAA	-15	NA	1905390	1913447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1911889
WTC11_00043400	chr19	+	2973	2	FSM	ENSG00000227500.10	ENST00000472442.2	2973	2	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGAGCCAGGGACCTG	1922077	False	NA	4	True	AATAAA	-13	NA	1922112	1926005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1923188_1924107
WTC11_00043401	chr19	+	3027	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	-132	0	-132	0	multi-exon	TRUE	canonical	3	670	junction_2	42.1616331014955	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	1941026	False	NA	NA	False	AATAAA	-18	NA	1941039	1981338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
WTC11_00043408	chr19	+	7655	28	FSM	ENSG00000104885.19	ENST00000398665.8	7652	28	-3	0	-3	0	multi-exon	FALSE	canonical	2	13	junction_1	20.1540024174622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	2158624	True	NA	20	True	AATAAA	-20	NA	2163929	2232578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2229784
WTC11_00043409	chr19	+	3296	4	FSM	ENSG00000104885.19	ENST00000482433.1	3658	4	39	323	39	-323	multi-exon	FALSE	canonical	3	59	junction_2	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATGGGGACCGGCAG	2216182	False	NA	NA	False	NA	NA	NA	2216204	2222559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2216766_2216954_2217091_2217771_2217919_2220107
WTC11_00043410	chr19	+	2907	7	FSM	ENSG00000104885.19	ENST00000457590.2	2907	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.5382235919696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATTTTTAGATGGTA	2222517	False	NA	22	True	TATAAA	-17	NA	2222529	2230694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2227362_2227468_2227736_2228383_2229784
WTC11_00043411	chr19	+	5053	2	ISM	ENSG00000104885.19	ENST00000686010.1	5469	28	62984	-4231	4387	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	2226905	False	NA	20	True	AATAAA	-20	NA	2226916	2232578	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_2227128_2227736
WTC11_00043412	chr19	+	1626	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	753	junction_1	52.9172408105336	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	2219477	True	NA	21	True	ATTAAA	-13	NA	2236816	2248655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
WTC11_00043414	chr19	+	1000	8	FSM	ENSG00000104897.10	ENST00000592314.5	885	8	-115	0	-79	0	multi-exon	FALSE	canonical	3	753	junction_1	49.5897454837475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCCACCGCTGCCTGAG	2236712	False	NA	NA	False	NA	NA	NA	2236744	2247878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2247023_2247593_2247663_2247766
WTC11_00043418	chr19	+	2760	3	FSM	ENSG00000104899.8	ENST00000589313.2	1686	3	-608	-466	-173	0	multi-exon	FALSE	canonical	3	12	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTCCGTGCGTGTTA	2249110	False	NA	9	True	AATAAA	-19	NA	2249135	2252073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2250761_2250848_2251009_2251098
WTC11_00043419	chr19	+	1142	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	-11	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_3	138.420454493627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	2269494	False	NA	-5	True	NA	NA	NA	2269508	2273221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
WTC11_00043420	chr19	+	987	5	NIC	ENSG00000104904.12	novel	969	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	118	junction_1	2914.78018039097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	2268702	True	NA	31	True	AATAAA	-20	NA	2269516	2273331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2269745_2271390_2271531_2271781_2271955_2272734_2272821_2272971
WTC11_00043421	chr19	+	1152	5	NIC	ENSG00000104904.12	novel	1148	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	6605	junction_2	215.174928836981	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTCTGTGGTGGTG	2268702	True	NA	111	True	AATAAA	-17	NA	2269516	2273490	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2269745_2271384_2271531_2271781_2271955_2272734_2272821_2272971
WTC11_00043422	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	3225.4334075697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	2269494	False	NA	109	True	AATAAA	-15	NA	2269508	2273488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
WTC11_00043424	chr19	+	2002	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	-1220	-56	-149	0	multi-exon	FALSE	canonical	3	6605	junction_1	195.766868153594	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	2270072	False	NA	25	True	AATAAA	-14	NA	2270141	2273325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
WTC11_00043425	chr19	+	2832	1	FSM	ENSG00000104904.12	ENST00000586054.2	2832	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	2270551	False	NA	109	True	AATAAA	-15	NA	2270656	2273488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2270700_2273500
WTC11_00043426	chr19	+	657	2	FSM	ENSG00000104904.12	ENST00000589739.3	657	2	0	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	2272366	False	NA	31	True	AATAAA	-20	NA	2272523	2273331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2272821_2272971
WTC11_00043427	chr19	+	3702	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	-11	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	39.0850067813994	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	2324597	True	NA	NA	False	ATTAAA	-13	NA	2328672	2355095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
WTC11_00043428	chr19	+	2482	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	-23	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	27.6095221669212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	2324597	True	NA	NA	False	AATACA	-7	NA	2328672	2342503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
WTC11_00043429	chr19	+	2603	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	-20	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	50.9193039053371	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	2324597	True	NA	29	True	AATAAA	-19	NA	2328672	2353933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
WTC11_00043430	chr19	+	749	5	FSM	ENSG00000005206.17	ENST00000622308.4	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	55.974882760038	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACCTGGGGTTTGTCCGG	NA	False	NA	NA	False	NA	NA	NA	2338759	2341187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2338842_2339068_2339209_2339826_2339967_2340075_2340173_2340897
WTC11_00043431	chr19	+	495	6	FSM	ENSG00000005206.17	ENST00000612623.1	495	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	55.3736399381511	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTGCTGGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	2339157	2343972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2339209_2339826_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964
WTC11_00043433	chr19	+	1733	7	FSM	ENSG00000005206.17	ENST00000589515.2	1733	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	65.1786007827722	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTCACCAGCTGCTT	2342663	False	NA	NA	False	NA	NA	NA	2342721	2353567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
WTC11_00043436	chr19	+	1372	4	FSM	ENSG00000099860.9	ENST00000215631.9	1371	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	53	junction_1	9.93310961716756	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTATGTTTTCG	2475054	True	NA	24	True	AATAAA	-14	NA	2476125	2478257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2476403_2476528_2476631_2477028_2477252_2477487
WTC11_00043437	chr19	+	1609	3	FSM	ENSG00000099860.9	ENST00000587345.1	765	3	-21	-823	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTATGTTTTCGGC	2475055	True	NA	26	True	AATAAA	-16	NA	2476126	2478259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2476403_2476528_2476631_2477028
WTC11_00043438	chr19	+	4778	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	-22	5	-22	-5	multi-exon	FALSE	canonical	3	439	junction_8	49.9407287580877	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATATATTGGAACCTGT	2785459	False	NA	NA	False	AATAAA	-13	NA	2785480	2815802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
WTC11_00043439	chr19	+	421	3	FSM	ENSG00000172009.15	ENST00000586780.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGAGGATCGTGTGGCT	2775952	True	NA	NA	False	NA	NA	NA	2785566	2794888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2785679_2790420_2790634_2794792
WTC11_00043443	chr19	+	1200	6	NIC	ENSG00000172009.15	novel	1104	5	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	221.597292402231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	NA	False	NA	23	True	ATTAAA	-17	NA	2807712	2813599	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
WTC11_00043444	chr19	+	1104	5	FSM	ENSG00000172009.15	ENST00000590970.5	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	247.729060669111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	2808219	False	NA	23	True	ATTAAA	-17	NA	2808242	2813599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
WTC11_00043445	chr19	+	1877	5	FSM	ENSG00000172009.15	ENST00000395212.8	1877	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	303.623533343514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGCTCCCTGGCCTGG	2809527	False	NA	22	True	ATTAAA	-16	NA	2809537	2813598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2810491_2810639_2810769_2811597_2811735_2812198_2812373_2813114
WTC11_00043447	chr19	+	3014	5	FSM	ENSG00000172006.12	ENST00000317243.10	3704	5	0	690	0	273	multi-exon	FALSE	canonical	3	43	junction_3	5.11737237261468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGTCTCAAACTCCTG	2819346	True	NA	NA	False	NA	NA	NA	2819867	2836045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2820125_2823039_2823113_2827616_2827744_2832302_2832495_2833680
WTC11_00043448	chr19	+	1365	3	NNC	ENSG00000172006.12	novel	1148	6	NA	NA	0	-9527	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	20	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACTTTACCGTCTTAG	2819428	True	NA	NA	False	GATAAA	-17	NA	2819949	2824627	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_2820125_2823039_2823113_2823510
WTC11_00043449	chr19	+	2260	4	FSM	ENSG00000186300.12	ENST00000591539.1	2270	4	10	0	10	0	multi-exon	FALSE	canonical	3	8	junction_3	16.1314048434171	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTGGATATTACGTATC	2840522	True	NA	104	True	NA	NA	NA	2841453	2854209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852382
WTC11_00043451	chr19	+	1979	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	55	junction_3	6.12825877028341	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	2899456	True	NA	NA	False	AATAAA	-17	NA	2900918	2918473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
WTC11_00043452	chr19	+	921	1	FSM	ENSG00000279452.1	ENST00000624348.1	1610	1	565	124	565	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCATCGGAGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	2949599	2950520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2949600_2950500
WTC11_00043453	chr19	+	568	7	FSM	ENSG00000104953.20	ENST00000453329.5	582	7	14	0	2	0	multi-exon	FALSE	canonical	1	3	junction_1	3.23608130649127	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGACACTCTGACCGAGC	2977391	True	NA	NA	False	NA	NA	NA	2977551	2987161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2977620_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982
WTC11_00043454	chr19	+	1984	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	-14	7	0	-7	multi-exon	TRUE	canonical	2	4	junction_1	3.94443833137241	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCAGAGTGTGGACGCG	2977389	True	NA	-3	True	AATAAA	-10	NA	2977549	2995172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
WTC11_00043455	chr19	+	4211	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	45	junction_1	6.69991708074726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	3092326	True	NA	13	True	AATAAA	-14	NA	3094340	3123999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
WTC11_00043456	chr19	+	902	2	FSM	ENSG00000088256.9	ENST00000590534.1	2676	2	1774	0	111	0	multi-exon	FALSE	canonical	3	45	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3118923	3121454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3119360_3120988
WTC11_00043457	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	94.3225306908077	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3179440	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
WTC11_00043459	chr19	+	2735	9	FSM	ENSG00000125912.11	ENST00000592737.5	2735	9	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_5	138.442903393421	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3203767	True	NA	35	True	AATAAA	-21	NA	3203796	3209575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
WTC11_00043460	chr19	+	836	7	FSM	ENSG00000125912.11	ENST00000586904.1	836	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	288.726754716096	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGCAGTGCCCAGGCTC	3203985	False	NA	NA	False	NA	NA	NA	3204014	3207468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3204145_3204572_3204752_3205831_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390
WTC11_00043461	chr19	+	5178	14	FSM	ENSG00000105325.15	ENST00000441788.7	5178	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_9	20.7147433417838	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGTTCAGTACCTTCA	3502935	True	NA	19	True	AATACA	-22	NA	3506310	3538334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
WTC11_00043462	chr19	+	675	5	FSM	ENSG00000105325.15	ENST00000588327.1	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	20.1246117974981	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTCCCAGCTTCCTC	3503001	False	NA	NA	False	NA	NA	NA	3506376	3527060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526387_3526979
WTC11_00043464	chr19	+	1331	13	FSM	ENSG00000105325.15	ENST00000591290.5	1331	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	56.9977460568008	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGCAGGACCGTGCCA	NA	False	NA	NA	False	NA	NA	NA	3522983	3534839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532576_3532651_3533293_3533399_3534420_3534514_3534794
WTC11_00043467	chr19	+	798	3	FSM	ENSG00000064961.19	ENST00000470356.3	806	3	8	0	8	0	multi-exon	FALSE	canonical	3	616	junction_1	138.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGGCCCCGCCCCCATC	3572810	False	NA	NA	False	NA	NA	NA	3572830	3574269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572995_3573291_3573348_3573691
WTC11_00043468	chr19	+	1585	10	FSM	ENSG00000064961.19	ENST00000333651.11	1585	10	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	132.281685975211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	3555611	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
WTC11_00043471	chr19	+	2436	8	FSM	ENSG00000064961.19	ENST00000488973.6	2434	8	-2	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	62.4195809152277	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTAAGCTTGTTTG	3555644	True	NA	27	True	AATAAA	-29	NA	3572976	3579088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
WTC11_00043472	chr19	+	1833	9	NIC	ENSG00000064961.19	novel	1585	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	872	junction_2	71.0264035412184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	3555660	True	NA	22	True	AATAAA	-24	NA	3572992	3579083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
WTC11_00043479	chr19	+	555	4	FSM	ENSG00000105289.15	ENST00000587912.1	721	4	79	87	-41	-87	multi-exon	FALSE	canonical	2	77	junction_1	29.2384830127845	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCTGAGAGCAAGGAG	3719309	True	NA	NA	False	NA	NA	NA	3721695	3730200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027
WTC11_00043480	chr19	+	3068	21	FSM	ENSG00000105289.15	ENST00000589378.5	3068	21	0	0	0	0	multi-exon	FALSE	canonical	2	77	junction_1	17.43925170413	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGGCTTCTAGTGGCT	3719350	True	NA	11	True	AATAAA	-15	NA	3721736	3750809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
WTC11_00043481	chr19	+	2898	20	FSM	ENSG00000105289.15	ENST00000587686.1	2946	20	48	0	48	0	multi-exon	FALSE	canonical	3	111	junction_4	11.7438025148129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTCTAGTGGCTTCCA	3726037	False	NA	15	True	AATAAA	-19	NA	3728423	3750813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
WTC11_00043482	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	52	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	3758873	True	NA	22	True	AATAAA	-22	NA	3762681	3767565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3762819_3765165_3765332_3767260
WTC11_00043483	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.82664841387841	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	3879326	True	NA	14	True	AATAAA	-18	NA	3880684	3928082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
WTC11_00043484	chr19	+	1126	8	FSM	ENSG00000077009.14	ENST00000168977.7	1160	8	34	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	176.569694859727	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTGTCTACCGTGTT	3933075	False	NA	15	True	AGTAAA	-20	NA	3933102	3942416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
WTC11_00043485	chr19	+	1162	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	-23	0	11	0	multi-exon	FALSE	canonical	2	7	junction_1	213.303750074673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	3932863	False	NA	13	True	AGTAAA	-18	NA	3933079	3942414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
WTC11_00043486	chr19	+	691	5	FSM	ENSG00000077009.14	ENST00000599576.5	691	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	269.770620157199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	3933088	False	NA	12	True	AGTAAA	-17	NA	3933115	3942413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3933179_3936574_3936666_3937239_3937289_3938602_3938760_3942082
WTC11_00043487	chr19	+	1152	7	ISM	ENSG00000077009.14	ENST00000168977.7	1160	8	284	3	237	0	3prime_fragment	FALSE	canonical	3	370	junction_5	64.5249736320924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	3933325	False	NA	12	True	AGTAAA	-17	NA	3933352	3942413	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
WTC11_00043488	chr19	+	1045	6	NIC	ENSG00000077009.14	novel	1160	8	NA	NA	237	0	intron_retention	FALSE	canonical	3	99	junction_5	171.33989611296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	3933325	False	NA	12	True	AGTAAA	-17	NA	3933352	3942413	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3942082
WTC11_00043490	chr19	+	3078	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	100	junction_9	9.42814934120159	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	3998401	True	NA	17	True	AATAAA	-20	NA	4007726	4039386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
WTC11_00043492	chr19	+	3752	20	FSM	ENSG00000089847.13	ENST00000262970.9	3711	20	268	-309	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	17.7977246514852	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	4197757	True	NA	16	True	AATAAA	-19	NA	4198407	4224814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4198533_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
WTC11_00043493	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	24.3595516194786	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	4245002	True	NA	14	True	AATAAA	-15	NA	4247079	4269088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
WTC11_00043495	chr19	+	1910	6	FSM	ENSG00000105251.11	ENST00000543264.7	1910	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.12795348811006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4279219	True	NA	2	True	AATAAA	-13	NA	4279265	4290722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4280361_4282869_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
WTC11_00043496	chr19	+	1846	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	-6	-7	-6	0	multi-exon	FALSE	canonical	3	443	junction_6	31.770881147505	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	4300525	True	NA	17	True	AATAAA	-22	NA	4304591	4323843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
WTC11_00043497	chr19	+	720	6	FSM	ENSG00000105255.11	ENST00000601815.5	696	6	-24	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	14.9853261559434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCATGGAGCCCCGCCC	4300609	True	NA	NA	False	NA	NA	NA	4304675	4310755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474
WTC11_00043498	chr19	+	1650	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	-16	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	120.106521009015	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	4300593	True	NA	-20	True	NA	NA	NA	4304659	4323806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
WTC11_00043499	chr19	+	700	7	FSM	ENSG00000105255.11	ENST00000598010.5	700	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	157.659619292816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGGAAGGGGAGAAGAA	4303872	False	NA	NA	False	NA	NA	NA	4307938	4318950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318383_4318506_4318871
WTC11_00043500	chr19	+	1570	7	FSM	ENSG00000105255.11	ENST00000598179.1	1570	7	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	38.5461483880758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	4307406	False	NA	17	True	AATAAA	-22	NA	4311472	4323843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
WTC11_00043501	chr19	+	1656	13	FSM	ENSG00000269425.1_ENSG00000008382.16	ENST00000599840.6	1614	13	-82	40	-47	0	multi-exon	FALSE	canonical	3	49	junction_1	25.8009205262138	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	4343255	False	NA	-33	True	NA	NA	NA	4343479	4360038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
WTC11_00043502	chr19	+	1478	11	FSM	ENSG00000008382.16	ENST00000359935.8	1475	11	-3	0	-3	0	multi-exon	FALSE	canonical	2	11	junction_6	43.3981566428806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACGCTGGTCTCCCCAA	4341275	True	NA	10	True	AATAAA	-19	NA	4343550	4360081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
WTC11_00043503	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	37.0293606982217	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	4341435	False	NA	-33	True	NA	NA	NA	4343710	4360038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
WTC11_00043504	chr19	+	1578	11	FSM	ENSG00000008382.16	ENST00000596722.5	1578	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	37.0487516658794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGCAGCCAGCCACG	4341329	False	NA	-3	True	AATAAA	-6	NA	4343604	4360068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4359162_4359256_4359915
WTC11_00043505	chr19	+	379	3	FSM	ENSG00000008382.16	ENST00000601877.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGGCCAGGCCCAGT	4352972	False	NA	3	True	AATAAA	-13	NA	4352989	4354577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4353030_4354044_4354130_4354323
WTC11_00043506	chr19	+	3387	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	-21	0	-21	0	multi-exon	FALSE	canonical	3	535	junction_4	79.1241919712425	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	4395812	True	NA	27	True	TATAAA	-19	NA	4402618	4443397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
WTC11_00043507	chr19	+	875	5	FSM	ENSG00000167670.16	ENST00000587739.1	875	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	272.411912368017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGAATGCAGATATTT	4409098	False	NA	NA	False	NA	NA	NA	4409444	4428863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663
WTC11_00043508	chr19	+	2087	1	FSM	ENSG00000280239.1	ENST00000624986.1	2027	1	-146	86	-146	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	4448612	False	NA	NA	False	NA	NA	NA	4448663	4450750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4448700_4450800
WTC11_00043509	chr19	+	2022	15	NIC	ENSG00000167674.15	novel	2267	16	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	123.320409784381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCGAGCTCAGGCTGC	4465861	True	NA	-97	True	NA	NA	NA	4472240	4502033	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501910
WTC11_00043510	chr19	+	2450	16	FSM	ENSG00000167674.15	ENST00000616600.5	2267	16	-189	6	-189	0	multi-exon	FALSE	canonical	3	368	junction_1	51.3378353004228	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATCACTTTTAT	NA	False	NA	71	True	TATAAA	-14	NA	4472107	4502201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
WTC11_00043511	chr19	+	2193	15	NNC	ENSG00000167674.15	novel	2267	16	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	154.860635174116	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	4465861	True	NA	77	True	TATAAA	-20	NA	4472240	4502207	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493705_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501910
WTC11_00043512	chr19	+	2264	16	FSM	ENSG00000167674.15	ENST00000621835.4	2255	16	-9	0	0	0	multi-exon	FALSE	canonical	3	150	junction_15	88.6452104365111	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	4465917	True	NA	77	True	TATAAA	-20	NA	4472296	4502207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501913
WTC11_00043514	chr19	+	805	7	FSM	ENSG00000167674.15	ENST00000589486.5	805	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	148.653586868561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGGCCATGGCGCGGTC	4474579	True	NA	NA	False	NA	NA	NA	4474891	4493762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4475031_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702
WTC11_00043515	chr19	+	1349	4	FSM	ENSG00000167674.15	ENST00000592417.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTTTTATTGGCTTG	4498344	False	NA	78	True	TATAAA	-21	NA	4498361	4502208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4498377_4498813_4498916_4499490_4499705_4501190
WTC11_00043516	chr19	+	3840	2	FSM	ENSG00000185361.9	ENST00000327473.9	3816	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTGGCTCATGTCAGTT	4638959	True	NA	NA	False	AATAAA	-19	NA	4639491	4655568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4639630_4651866
WTC11_00043517	chr19	+	9548	1	FSM	ENSG00000141965.5	ENST00000269856.5	9540	1	-9	1	-9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATCTCCTCCATGAAG	4789781	True	NA	111	True	ATTAAA	-18	NA	4791724	4801272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4791700_4801300
WTC11_00043518	chr19	+	3966	17	FSM	ENSG00000276043.5	ENST00000620565.4	3965	17	-1	0	-1	0	multi-exon	TRUE	canonical	3	151	junction_1	69.0769215711731	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTGATTGTGTCTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	4909428	4962150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
WTC11_00043522	chr19	+	5711	24	FSM	ENSG00000127663.15	ENST00000611640.4	5703	24	-8	0	-8	0	multi-exon	FALSE	canonical	3	195	junction_11	23.4274813180455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCGTTCCATGCCCCG	4965712	True	NA	10	True	ATTAAA	-18	NA	4969104	5153595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119117_5119220_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
WTC11_00043523	chr19	+	5612	23	FSM	ENSG00000127663.15	ENST00000159111.9	5604	23	-8	0	-8	0	multi-exon	FALSE	canonical	3	26	junction_10	50.3411502148955	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTCCATGCCCCGGCA	4965712	True	NA	13	True	ATTAAA	-21	NA	4969104	5153598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
WTC11_00043525	chr19	+	454	1	FSM	ENSG00000274447.1	ENST00000619774.1	450	1	-68	64	-68	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTTCAAACATCGAATA	5294135	False	NA	NA	False	NA	NA	NA	5294178	5294632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5294200_5294600
WTC11_00043526	chr19	+	2708	19	FSM	ENSG00000160633.13	ENST00000589863.5	2708	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	283.600070521853	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAACTGTGTAAAAATA	5594476	True	NA	-51	True	NA	NA	NA	5623034	5668349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
WTC11_00043528	chr19	+	3058	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	-16	0	0	0	multi-exon	FALSE	canonical	3	415	junction_18	229.232545682327	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	5594524	True	NA	57	True	AATAAA	-26	NA	5623082	5668478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
WTC11_00043529	chr19	+	3064	21	FSM	ENSG00000160633.13	ENST00000588852.2	3064	21	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_14	180.657929524281	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	5594524	True	NA	57	True	AATAAA	-26	NA	5623082	5668478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
WTC11_00043532	chr19	+	3049	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	-35	0	0	0	multi-exon	FALSE	canonical	3	874	junction_18	140.503167224088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	5594524	True	NA	45	True	AATAAA	-14	NA	5623082	5668466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
WTC11_00043538	chr19	+	1537	6	FSM	ENSG00000167733.14	ENST00000581893.5	1540	6	0	3	0	-3	multi-exon	FALSE	canonical	3	9	junction_1	29.312113536898	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATCTGTTGTTCAAATT	NA	False	NA	14	True	AATAAA	-16	NA	5681008	5688519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684964_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00043539	chr19	+	741	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	-11	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.326921891156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	NA	False	NA	NA	False	AATAAA	-23	NA	5681036	5685589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
WTC11_00043541	chr19	+	861	4	FSM	ENSG00000167733.14	ENST00000578046.1	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	18.4028983224563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGGTGCCCCGTGTTAG	5683835	False	NA	NA	False	NA	NA	NA	5684854	5688126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5684906_5686899_5686992_5687281_5687376_5687502
WTC11_00043543	chr19	+	886	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	-344	14	-323	0	multi-exon	FALSE	canonical	3	14569	junction_2	662	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	5689958	False	NA	28	True	AATAAA	-3	NA	5689971	5691653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690601_5691318_5691454_5691531
WTC11_00043544	chr19	+	918	2	FSM	ENSG00000130255.13	ENST00000590786.5	907	2	-11	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGCCATGGAGTTACTGAA	5498632	True	NA	NA	False	NA	NA	NA	5690294	5691390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505
WTC11_00043545	chr19	+	463	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	-11	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3544.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	5498632	True	NA	28	True	AATAAA	-3	NA	5690294	5691653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505_5690601_5691318
WTC11_00043546	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3077.55534294493	2904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	5498632	True	NA	44	True	ATTAAA	-17	NA	5690294	5691875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
WTC11_00043547	chr19	+	1551	3	FSM	ENSG00000171119.3	ENST00000303212.3	1528	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	42	junction_1	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGGTGATTCATCCT	5804836	True	NA	8	True	GATAAA	-15	NA	5805043	5828324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5805452_5823767_5824335_5827748
WTC11_00043548	chr19	+	784	2	FSM	ENSG00000105519.18	ENST00000585541.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGGACGGGCAGGTGG	5913935	False	NA	NA	False	NA	NA	NA	5914271	5915130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5914310_5914384
WTC11_00043550	chr19	+	2402	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	8	0	-8	multi-exon	FALSE	canonical	3	563	junction_1	33.2962460346508	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGGCCGGGCGCGGTGG	6353228	True	NA	NA	False	AATAAA	-11	NA	6361530	6370234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
WTC11_00043551	chr19	+	1506	5	FSM	ENSG00000125656.11	ENST00000596070.1	1346	5	-113	-47	-79	0	multi-exon	FALSE	canonical	3	563	junction_1	36.2172265641642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGACCCCCAGCTGGGC	6361359	False	NA	NA	False	NA	NA	NA	6361451	6368754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361773_6361868_6362543_6364451_6364640_6366257_6366364_6368537
WTC11_00043552	chr19	+	1787	5	FSM	ENSG00000125656.11	ENST00000596149.5	745	5	-339	-703	-66	551	multi-exon	FALSE	canonical	3	605	junction_1	18.8729303501073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGTAAGCGTGTTACAG	6361372	False	NA	NA	False	AAAACA	-27	NA	6361464	6369457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
WTC11_00043553	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	89.3582054927744	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	6366292	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
WTC11_00043555	chr19	+	1118	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	179	junction_3	19.7709101684492	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460299	True	NA	12	True	TATAAA	-24	NA	6464238	6467221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
WTC11_00043556	chr19	+	774	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	-41	0	-29	0	multi-exon	FALSE	canonical	3	57	junction_4	67.0312427156173	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460302	True	NA	12	True	TATAAA	-24	NA	6464241	6467221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
WTC11_00043557	chr19	+	688	1	FSM	ENSG00000275234.1	ENST00000615487.1	688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTTCAGTTCTGATT	6469437	False	NA	-16	True	AATAAA	-38	NA	6469464	6470152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6469500_6470200
WTC11_00043558	chr19	+	2042	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	-18	11	-18	6	multi-exon	FALSE	canonical	3	510	junction_1	43.3077606229821	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCGGTGTCTTATTAGA	6731257	True	NA	22	True	TATAAA	-7	NA	6739661	6751515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
WTC11_00043559	chr19	+	2068	13	FSM	ENSG00000125733.18	ENST00000595305.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	42.3073246876025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731322	True	NA	33	True	TATAAA	-18	NA	6739726	6751526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750634_6751062
WTC11_00043565	chr19	+	5172	21	NIC	ENSG00000104880.19	novel	5368	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_20	36.224956866779	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGAGATGAGCGGTGACT	7388038	True	NA	1	True	AATAAA	-4	NA	7395142	7472467	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125_7470316_7470536
WTC11_00043566	chr19	+	5416	20	FSM	ENSG00000104880.19	ENST00000594665.2	5368	20	-48	0	-35	0	multi-exon	FALSE	canonical	3	152	junction_1	19.4891830215544	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGAGATGAGCGGTGACT	7388015	True	NA	1	True	AATAAA	-4	NA	7395119	7472467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
WTC11_00043567	chr19	+	5532	20	FSM	ENSG00000104880.19	ENST00000617428.4	5514	20	-18	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	38.2158181053684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGTGACTGGCGTGCAC	7388063	True	NA	10	True	AATAAA	-13	NA	7395167	7472476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7395248_7440188_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
WTC11_00043568	chr19	+	5232	20	FSM	ENSG00000104880.19	ENST00000359920.11	5733	20	501	0	501	0	multi-exon	FALSE	canonical	3	38	junction_19	36.8530059061853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGTGACTGGCGTGCACG	NA	False	NA	11	True	AATAAA	-14	NA	7440188	7472477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125_7470316_7470536
WTC11_00043569	chr19	+	1968	2	FSM	ENSG00000198816.7	ENST00000597229.2	1968	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGTCGTGGCTTGCC	7513652	True	NA	31	True	AGTAAA	-20	NA	7516102	7521025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7516250_7519204
WTC11_00043571	chr19	+	1920	14	NIC	ENSG00000090674.16	novel	2084	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	35.1556134886495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7521222	True	NA	5	True	AATAAA	-13	NA	7522619	7533990	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530434_7530502_7533522_7533654_7533758
WTC11_00043572	chr19	+	2097	14	FSM	ENSG00000090674.16	ENST00000264079.11	2084	14	-13	0	-13	0	multi-exon	TRUE	canonical	3	100	junction_11	20.3501886358528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGGAGCAGTCCTTGC	7521213	True	NA	24	True	AATAAA	-32	NA	7522610	7534009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
WTC11_00043573	chr19	+	2253	13	FSM	ENSG00000090674.16	ENST00000394321.9	2253	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	20.7498326633146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7521273	True	NA	5	True	AATAAA	-13	NA	7522670	7533990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
WTC11_00043574	chr19	+	573	2	FSM	ENSG00000090674.16	ENST00000596008.1	772	2	199	0	58	0	multi-exon	FALSE	canonical	3	144	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCTGAGGCAGGAGGAT	7525041	False	NA	NA	False	NA	NA	NA	7526438	7527165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7526607_7526760
WTC11_00043575	chr19	+	758	4	FSM	ENSG00000090674.16	ENST00000595860.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	17.2497987105808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCCGCATGCACCCAGC	7527256	False	NA	NA	False	NA	NA	NA	7528653	7530501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7528971_7529100_7529203_7529589_7529713_7530285
WTC11_00043578	chr19	+	4617	35	FSM	ENSG00000032444.17	ENST00000221249.10	4617	35	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_1	77.5996735982862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	22	True	AATAAA	-16	NA	7534003	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7534240_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00043584	chr19	+	4372	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	0	0	0	0	multi-exon	FALSE	canonical	1	134	junction_27	59.8449262052165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7534947	True	NA	22	True	AATAAA	-16	NA	7535716	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00043588	chr19	+	4149	17	FSM	ENSG00000076826.10	ENST00000160298.9	4137	17	-12	0	-12	0	multi-exon	FALSE	canonical	3	77	junction_4	37.4035739435418	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592400	True	NA	11	True	AATAAA	-16	NA	7595850	7618304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
WTC11_00043589	chr19	+	4171	18	NIC	ENSG00000076826.10	novel	4179	19	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	51.7010303552297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592426	True	NA	11	True	AATAAA	-16	NA	7595876	7618304	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
WTC11_00043590	chr19	+	460	2	NNC	ENSG00000076826.10	novel	4137	17	NA	NA	-10	-19905	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATCTGTTTTGCGAATG	7592441	True	NA	12	True	TATAAA	-20	NA	7595891	7597526	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7596151_7597325
WTC11_00043593	chr19	+	663	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	2942	junction_1	189.519274891911	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCATTTGAGTGTGAG	7619674	True	NA	NA	False	NA	NA	NA	7629792	7631956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
WTC11_00043594	chr19	+	244	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	-21	-4	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1671	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7619674	True	NA	13	True	AATATA	-26	NA	7629792	7631624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629861_7630822_7630847_7631472
WTC11_00043595	chr19	+	521	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	-150	4	-104	0	multi-exon	FALSE	canonical	3	19	junction_4	1543.73692302154	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	7619570	True	NA	9	True	AATATA	-22	NA	7629688	7631620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
WTC11_00043596	chr19	+	1831	1	FSM	ENSG00000229833.10	ENST00000623154.1	1815	1	-16	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTGTTTTATTCTTT	7619674	True	NA	12	True	AATATA	-25	NA	7629792	7631623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629800_7631600
WTC11_00043597	chr19	+	474	2	FSM	ENSG00000229833.10	ENST00000600836.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	3389	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7620406	False	NA	13	True	AATATA	-26	NA	7630524	7631624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7630847_7631472
WTC11_00043599	chr19	+	1173	4	FSM	ENSG00000076944.17	ENST00000595181.5	632	4	-7	-534	1	-315	multi-exon	FALSE	canonical	3	364	junction_1	47.2440472440709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGCTCAGGCCCAGA	7631060	True	NA	NA	False	NA	NA	NA	7637105	7640690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730
WTC11_00043600	chr19	+	1899	19	FSM	ENSG00000076944.17	ENST00000221283.10	1885	19	0	-14	0	14	multi-exon	FALSE	canonical	3	352	junction_10	26.7420231558709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCTTATCAAGGGAGT	7631064	True	NA	35	True	AATAAA	-35	NA	7637109	7647887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640730_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
WTC11_00043602	chr19	+	1922	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	-8	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	94.2613912296186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	7631059	True	NA	20	True	AATAAA	-20	NA	7637104	7647872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
WTC11_00043603	chr19	+	1890	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	-17	-14	0	14	multi-exon	FALSE	canonical	3	13	junction_4	91.8466415039524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCTTATCAAGGGAGT	7631064	True	NA	35	True	AATAAA	-35	NA	7637109	7647887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
WTC11_00043610	chr19	+	5506	2	FSM	ENSG00000181029.9	ENST00000596148.3	5508	2	0	2	0	-2	multi-exon	FALSE	canonical	3	651	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAGTTGCTCCTCAAT	7667622	True	NA	6	True	AATAAA	-18	NA	7680832	7687701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7680879_7682241
WTC11_00043611	chr19	+	842	2	FSM	ENSG00000181029.9	ENST00000317378.5	790	2	-54	2	-12	0	multi-exon	FALSE	canonical	3	142	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	7667610	True	NA	26	True	GATAAA	-19	NA	7680820	7682854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7681050_7682241
WTC11_00043612	chr19	+	3920	20	NNC	ENSG00000142459.9	novel	3903	20	NA	NA	-21	0	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_1	15.8276730904155	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7829673	True	NA	22	True	AATAAA	-18	NA	7830196	7864976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7830382_7846499_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7857091_7857125_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
WTC11_00043613	chr19	+	3876	19	FSM	ENSG00000142459.9	ENST00000270530.8	3855	19	-21	0	-6	0	multi-exon	FALSE	canonical	3	16	junction_11	14.14006216481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7829688	True	NA	22	True	AATAAA	-18	NA	7830211	7864976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
WTC11_00043615	chr19	+	3600	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	-10	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_2	1	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	7888284	True	NA	7	True	AATAAA	-18	NA	7888499	7902016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7888601_7895598_7895742_7898660
WTC11_00043616	chr19	+	3468	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	-112	19	-78	0	multi-exon	FALSE	canonical	3	104	junction_7	9.48894093142117	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCCTTTTCTTCCAC	7903730	False	NA	-2	True	TTTAAA	-44	NA	7903764	7914459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
WTC11_00043617	chr19	+	3430	11	FSM	ENSG00000076984.18	ENST00000397981.7	3430	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	37.9711732765792	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	7898613	True	NA	17	True	AATAAA	-19	NA	7903842	7914478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911414_7911579_7912148_7912195_7912296
WTC11_00043619	chr19	+	1693	5	NIC	ENSG00000260001.7	novel	2575	6	NA	NA	953	0	intron_retention	FALSE	canonical	3	36	junction_1	5.7227615711298	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTAAGTTCTGGTGCAGT	7915761	False	NA	3	True	AATAAA	-14	NA	7915782	7919090	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7916943_7917472_7917600_7917700_7917860_7918056_7918130_7918916
WTC11_00043620	chr19	+	479	3	FSM	ENSG00000260001.7	ENST00000566166.1	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTAAGTTCTGGTGCAGT	7917604	False	NA	3	True	AATAAA	-14	NA	7917627	7919090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7917860_7918056_7918130_7918916
WTC11_00043621	chr19	+	1535	5	FSM	ENSG00000104976.12	ENST00000221573.11	1520	5	-18	3	-18	-3	multi-exon	FALSE	canonical	3	162	junction_1	19.5751756058534	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGTGACTTAAAGATG	7917893	True	NA	21	True	AATAAA	-21	NA	7920319	7923247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034_7922348_7922444
WTC11_00043622	chr19	+	975	4	FSM	ENSG00000104976.12	ENST00000595637.1	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	22.464787260659	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGCGAACTGAAATCG	7917960	True	NA	NA	False	NA	NA	NA	7920386	7922657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034
WTC11_00043624	chr19	+	1947	12	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	130.095324237383	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	8209209	True	NA	8	True	ATTAAA	-13	NA	8209231	8262418	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8210705_8210863_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043625	chr19	+	791	5	FSM	ENSG00000090661.12	ENST00000561053.5	768	5	-23	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	177.665943557002	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGCCCAGGATGGGGCT	8204379	True	NA	NA	False	NA	NA	NA	8209302	8255724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251043_8251250_8254498_8254617_8255606
WTC11_00043626	chr19	+	1813	12	FSM	ENSG00000090661.12	ENST00000558331.5	1803	12	-10	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	134.628782550052	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204379	True	NA	11	True	ATTAAA	-16	NA	8209302	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251109_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043628	chr19	+	1794	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	-14	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	92.4106000860532	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204432	True	NA	11	True	ATTAAA	-16	NA	8209355	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043629	chr19	+	1653	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	-16	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.734327760094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204416	True	NA	11	True	ATTAAA	-16	NA	8209339	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043630	chr19	+	1666	11	NIC	ENSG00000090661.12	novel	1637	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	136.613359522413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204435	True	NA	11	True	ATTAAA	-16	NA	8209358	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043631	chr19	+	1617	11	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	139.204202522769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204435	True	NA	11	True	ATTAAA	-16	NA	8209358	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8210705_8210863_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043632	chr19	+	1460	10	NIC	ENSG00000090661.12	novel	1637	11	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_1	148.033613133247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204435	True	NA	11	True	ATTAAA	-16	NA	8209358	8262421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00043635	chr19	+	1523	3	FSM	ENSG00000233927.5	ENST00000449223.3	1523	3	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	151.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCAATCTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8321157	8322946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8321570_8321655_8322092_8322271
WTC11_00043636	chr19	+	1331	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	-1	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	577.440521227559	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	8173549	True	NA	30	True	AATAAA	-30	NA	8321494	8323340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
WTC11_00043638	chr19	+	510	2	FSM	ENSG00000185236.12	ENST00000598706.1	574	2	-19	83	-16	-83	multi-exon	FALSE	canonical	3	1359	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCTGGGTACCAAGTG	8372667	True	NA	NA	False	NA	NA	NA	8390343	8400259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8390457_8399862
WTC11_00043639	chr19	+	1606	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	-16	0	-16	0	multi-exon	FALSE	canonical	3	1192	junction_4	88.7760525141775	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	8372667	True	NA	37	True	NA	NA	NA	8390343	8404434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
WTC11_00043640	chr19	+	2525	4	FSM	ENSG00000185236.12	ENST00000594216.1	894	4	-121	-1510	-88	0	multi-exon	FALSE	canonical	3	1359	junction_1	24.6576560118759	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	8390248	False	NA	37	True	NA	NA	NA	8390271	8404434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484
WTC11_00043641	chr19	+	1198	4	FSM	ENSG00000099785.11	ENST00000381035.8	1192	4	-6	0	-6	0	multi-exon	TRUE	canonical	2	15	junction_3	90.0777441991084	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	NA	False	NA	9	True	AATAAA	-9	NA	8413263	8439004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8438387
WTC11_00043642	chr19	+	2051	6	NNC	ENSG00000099785.11	novel	1667	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	76.5469790390189	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	NA	False	NA	9	True	AATAAA	-9	NA	8413263	8439004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_8413795_8418538_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00043643	chr19	+	1575	5	FSM	ENSG00000099785.11	ENST00000215555.7	1380	5	-41	-154	-6	154	multi-exon	FALSE	canonical	3	84	junction_1	54.4357419348722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGACCATCCTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	8413263	8439171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00043644	chr19	+	700	4	FSM	ENSG00000099785.11	ENST00000595142.5	690	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	49	junction_1	74.4222189044822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGCACCGGCACGC	8412157	True	NA	NA	False	NA	NA	NA	8413279	8426668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608
WTC11_00043646	chr19	+	1434	5	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	15	junction_4	83.3351666465004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGGACTTGTCAGTT	8412183	True	NA	16	True	AATAAA	-16	NA	8413305	8439011	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608_8426805_8438387
WTC11_00043647	chr19	+	1665	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	62.7745171227943	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	8412168	True	NA	22	True	AATAAA	-22	NA	8413290	8439017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00043649	chr19	+	2531	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-57	0	intron_retention	FALSE	canonical	0	0	junction_3	1294.30056953001	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	NA	False	NA	40	True	AATAAA	-13	NA	8444862	8489110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
WTC11_00043650	chr19	+	2472	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	96	0	-57	0	multi-exon	FALSE	canonical	0	0	junction_3	1120.79870899897	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	NA	False	NA	44	True	AATAAA	-17	NA	8444862	8489114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
WTC11_00043652	chr19	+	2528	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	-55	4	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1132.26468048185	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386007	True	NA	40	True	AATAAA	-13	NA	8444919	8489110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
WTC11_00043653	chr19	+	2357	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1268.78703230027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386007	True	NA	40	True	AATAAA	-13	NA	8444919	8489110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
WTC11_00043655	chr19	+	2379	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1398.55107185677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386058	True	NA	40	True	AATAAA	-13	NA	8444970	8489110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
WTC11_00043658	chr19	+	1809	1	FSM	ENSG00000099783.12	ENST00000602219.1	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8487278	False	NA	40	True	AATAAA	-13	NA	8487301	8489110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8487300_8489100
WTC11_00043659	chr19	+	4071	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	132	junction_3	19.5056971734471	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	9137185	True	NA	10	True	AATAAA	-23	NA	9140381	9163413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
WTC11_00043662	chr19	+	3099	7	NIC	ENSG00000188321.14	novel	2732	7	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	15.7630016882008	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323787	True	NA	4	True	AATAAA	-18	NA	9323804	9343843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341616
WTC11_00043668	chr19	+	1824	9	NNC	ENSG00000188629.13	novel	1920	6	NA	NA	-11074	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	20.5939159704996	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	NA	False	NA	13	True	AATAAA	-14	NA	9351945	9382185	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_9352005_9364861_9364949_9371609_9371753_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9381147
WTC11_00043669	chr19	+	1920	6	FSM	ENSG00000188629.13	ENST00000589262.5	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	13.5705563629499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	NA	False	NA	13	True	AATAAA	-14	NA	9376410	9382185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9380667
WTC11_00043670	chr19	+	903	2	FSM	ENSG00000278611.3	ENST00000653468.2	909	2	0	6	0	-6	multi-exon	FALSE	canonical	3	11	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTGGTGGTC	9538460	True	NA	10	True	AATAAA	-16	NA	9538688	9539728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9538999_9539135
WTC11_00043671	chr19	+	2332	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	5	-1	-5	multi-exon	FALSE	canonical	3	58	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCACAGAGTGAGACTC	9620082	True	NA	NA	False	NA	NA	NA	9621485	9635441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9621646_9632227_9632418_9633459
WTC11_00043672	chr19	+	2651	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	-243	5	-5	-5	multi-exon	FALSE	canonical	3	39	junction_1	20.6074420214316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCACAGAGTGAGACTC	9621227	False	NA	NA	False	NA	NA	NA	9621243	9635441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
WTC11_00043673	chr19	+	376	1	FSM	ENSG00000267119.1	ENST00000585756.1	315	1	12	-73	12	73	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	9820141	False	NA	NA	False	AATAAA	-27	NA	9820152	9820528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9820200_9820500
WTC11_00043674	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	-39	39	-13	0	multi-exon	FALSE	canonical	3	3703	junction_1	510.830390149216	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	9827867	False	NA	-17	True	NA	NA	NA	9827878	9830076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
WTC11_00043675	chr19	+	829	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	-355	39	-355	0	multi-exon	FALSE	canonical	3	603	junction_1	1840.77706078167	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	9827525	False	NA	-17	True	NA	NA	NA	9827536	9830076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
WTC11_00043680	chr19	+	1062	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	-60	7	1	0	multi-exon	FALSE	canonical	3	1813	junction_3	99.9344229426922	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9795311	False	NA	13	True	ATTAAA	-13	NA	9835257	9849682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
WTC11_00043681	chr19	+	784	6	FSM	ENSG00000127445.14	ENST00000590540.5	702	6	-82	0	1	0	multi-exon	FALSE	canonical	3	40	junction_1	859.245855387153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9795311	False	NA	13	True	ATTAAA	-13	NA	9835257	9849682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089_9849202_9849532
WTC11_00043683	chr19	+	766	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	-118	0	-34	0	multi-exon	FALSE	canonical	3	287	junction_4	721.269843747817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9795276	False	NA	13	True	ATTAAA	-13	NA	9835222	9849682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
WTC11_00043685	chr19	+	4035	3	FSM	ENSG00000127445.14	ENST00000586025.5	4022	3	-13	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_2	69.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815161	True	NA	13	True	ATTAAA	-13	NA	9835317	9849682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9838649_9848029_9848141_9849089
WTC11_00043687	chr19	+	1504	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	-23	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	55.2700236132036	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	10083664	True	NA	NA	False	AATACA	-33	NA	10086316	10092927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
WTC11_00043688	chr19	+	1948	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	-20	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	41.5893432189997	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	10083644	True	NA	11	True	AATAAA	-17	NA	10086296	10093243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
WTC11_00043689	chr19	+	2239	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	-170	10	5	0	multi-exon	FALSE	canonical	3	130	junction_6	21.5148527508066	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	10086098	True	NA	10	True	AATAAA	-16	NA	10086126	10093242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
WTC11_00043691	chr19	+	2063	8	FSM	ENSG00000130813.18	ENST00000397881.7	2140	8	77	0	77	0	multi-exon	FALSE	canonical	3	19	junction_3	64.9257032212629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	10084276	False	NA	10	True	AATAAA	-16	NA	10086928	10093242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10087053_10087250_10087301_10089110_10089379_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
WTC11_00043692	chr19	+	550	5	FSM	ENSG00000130813.18	ENST00000586889.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	76.2397534098845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGACCTCCCTCCTGCCA	10084391	False	NA	NA	False	NA	NA	NA	10087043	10089901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10087053_10087250_10087301_10089110_10089209_10089306_10089696_10089897
WTC11_00043693	chr19	+	1655	1	FSM	ENSG00000130813.18	ENST00000586730.1	1655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1048	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCAGAGGGGCGTCTT	10088937	False	NA	12	True	AATAAA	-18	NA	10091589	10093244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10091600_10093200
WTC11_00043694	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_9	66.6611016961079	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	10091390	True	NA	46	True	NA	NA	NA	10106361	10112012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
WTC11_00043695	chr19	+	1641	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	-24	-42	-24	0	multi-exon	FALSE	canonical	3	883	junction_8	69.699067425612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCCACGTCAGCGTTTG	10091423	True	NA	44	True	AGTAAA	-16	NA	10106394	10111296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
WTC11_00043696	chr19	+	581	4	FSM	ENSG00000130810.20	ENST00000430370.1	594	4	13	0	13	0	multi-exon	FALSE	canonical	1	7	junction_1	462.550177458259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGAACCTGTTCCCCTC	10106687	True	NA	NA	False	NA	NA	NA	10106712	10108098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10107006_10107504_10107607_10107803_10107855_10107963
WTC11_00043697	chr19	+	523	4	FSM	ENSG00000130810.20	ENST00000466025.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_3	69.3124968690511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCAGATCGGCCCGCGG	10107955	True	NA	NA	False	NA	NA	NA	10107989	10110315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10108135_10109630_10109708_10109912_10110021_10110122
WTC11_00043699	chr19	+	757	5	FSM	ENSG00000130810.20	ENST00000444703.1	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	359.64913457424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCCACGTCAGCGTTTG	10110128	True	NA	44	True	AGTAAA	-16	NA	10110145	10111296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10110247_10110323_10110403_10110484_10110615_10110696_10110792_10110944
WTC11_00043700	chr19	+	1017	3	FSM	ENSG00000130810.20	ENST00000486482.1	1017	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	19.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCAGGGCCCACTAAGC	10110427	False	NA	NA	False	NA	NA	NA	10110457	10111634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10110615_10110696_10110867_10110944
WTC11_00043705	chr19	+	1392	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	-204	30	0	0	multi-exon	FALSE	canonical	3	1042	junction_8	74.1788379526129	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATTTTTGAATCAA	10251681	False	NA	-10	True	TTTAAA	-3	NA	10252009	10260025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
WTC11_00043706	chr19	+	845	6	FSM	ENSG00000105364.14	ENST00000588502.5	827	6	-18	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_3	63.4255469034363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGAGCATCGTGGAGG	10235651	False	NA	NA	False	NA	NA	NA	10252257	10258623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412
WTC11_00043707	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	4.50924975282289	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	10270838	True	NA	11	True	AATAAA	-16	NA	10271119	10286615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
WTC11_00043708	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	10286797	True	NA	19	True	AATAAA	-15	NA	10286954	10288520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10287407_10287535_10287839_10287985
WTC11_00043710	chr19	+	2905	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	-96	4	-96	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGAACGTTTATGACTA	10333280	False	NA	12	True	AATAAA	-18	NA	10333339	10336244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10333300_10336200
WTC11_00043711	chr19	+	4920	15	FSM	ENSG00000065989.16	ENST00000380702.7	4897	15	-23	0	-23	0	multi-exon	TRUE	canonical	2	4	junction_1	12.1646862613359	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGCTGATGTGGCT	10420438	True	NA	4	True	ATTAAA	-17	NA	10420514	10469630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10421085_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
WTC11_00043714	chr19	+	1747	10	FSM	ENSG00000130734.10	ENST00000586417.5	1752	10	5	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_1	84.2620837947419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGGATCTTGAGCTC	10540595	True	NA	NA	False	NA	NA	NA	10543899	10553124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10544326_10544708_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
WTC11_00043715	chr19	+	1967	10	FSM	ENSG00000130734.10	ENST00000309469.9	1963	10	-4	0	-4	0	multi-exon	FALSE	canonical	3	233	junction_4	37.4515324646485	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10540595	True	NA	15	True	AATAAA	-15	NA	10543899	10553418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
WTC11_00043717	chr19	+	1503	8	NIC	ENSG00000130734.10	novel	1619	9	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_3	87.386544520683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10543996	False	NA	15	True	AATAAA	-15	NA	10544021	10553418	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10544326_10544782_10544867_10544956_10545131_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
WTC11_00043719	chr19	+	586	7	FSM	ENSG00000129353.15	ENST00000590382.5	586	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	239.2632209281	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTACACCGTCTCTTGGT	10599292	True	NA	NA	False	NA	NA	NA	10602456	10631918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10602562_10626252_10626302_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867
WTC11_00043720	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	105.290226260711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	10599345	True	NA	12	True	AATAAA	-12	NA	10602509	10644550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
WTC11_00043721	chr19	+	3853	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	-71	2	-66	0	multi-exon	FALSE	canonical	3	152	junction_21	110.033101595438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	10618009	True	NA	17	True	AATAAA	-17	NA	10625453	10644555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
WTC11_00043723	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	66.3069889230792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618108	True	NA	19	True	AATAAA	-19	NA	10625552	10644557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
WTC11_00043726	chr19	+	2577	8	FSM	ENSG00000129353.15	ENST00000589561.5	2577	8	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_7	69.6797338264323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	10635784	False	NA	17	True	AATAAA	-17	NA	10635803	10644555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
WTC11_00043728	chr19	+	3726	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	-100	-1004	0	0	multi-exon	FALSE	canonical	3	1008	junction_13	188.114832778861	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10624864	True	NA	40	True	AATACA	-15	NA	10654260	10685765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
WTC11_00043729	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_17	393.978766811184	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	10624864	True	NA	35	True	AATAAA	-35	NA	10654260	10692417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
WTC11_00043730	chr19	+	3695	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	-24	0	0	0	multi-exon	FALSE	canonical	3	600	junction_13	256.409396369776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10624907	True	NA	40	True	AATACA	-15	NA	10654303	10685765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
WTC11_00043732	chr19	+	599	4	FSM	ENSG00000129351.17	ENST00000589283.5	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	616.753327244099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTCCTACTCAAGGGGG	10654627	False	NA	NA	False	NA	NA	NA	10654937	10671423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10655148_10670515_10670609_10670973_10671204_10671357
WTC11_00043734	chr19	+	3599	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	305.729814907188	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10650550	True	NA	40	True	AATACA	-15	NA	10655023	10685765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
WTC11_00043735	chr19	+	3035	17	FSM	ENSG00000129351.17	ENST00000250241.12	3035	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	391.807988688337	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10670472	True	NA	40	True	AATACA	-15	NA	10670536	10685765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684858
WTC11_00043736	chr19	+	3866	16	FSM	ENSG00000129351.17	ENST00000592763.5	3866	16	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_12	255.279576586577	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10670587	False	NA	40	True	AATACA	-15	NA	10670605	10685765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916
WTC11_00043737	chr19	+	3220	19	FSM	ENSG00000129351.17	ENST00000590261.5	3219	19	0	-1	0	0	multi-exon	FALSE	canonical	3	537	junction_16	371.451328583131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	10670587	False	NA	10	True	AATAAA	-15	NA	10670605	10689847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
WTC11_00043744	chr19	+	2579	3	FSM	ENSG00000129351.17	ENST00000591649.5	2579	3	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	55	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	10685911	False	NA	10	True	AATAAA	-15	NA	10685927	10689847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10687709_10688549_10688679_10689178
WTC11_00043746	chr19	+	1577	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	385	junction_5	40.5322017043239	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	10696604	True	NA	6	True	GGGGCT	-31	NA	10701423	10713345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
WTC11_00043747	chr19	+	1344	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	-15	0	-6	0	multi-exon	FALSE	canonical	3	369	junction_6	46.4234402265616	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	10696604	True	NA	26	True	NA	NA	NA	10701423	10713365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
WTC11_00043752	chr19	+	3726	21	FSM	ENSG00000079805.19	ENST00000585892.5	2774	21	-102	-850	-78	0	multi-exon	FALSE	canonical	0	0	junction_9	251.039658221565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGCTGCTGTGTGGGC	10717807	True	NA	17	True	AATAAA	-23	NA	10717976	10831897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
WTC11_00043755	chr19	+	3767	21	FSM	ENSG00000079805.19	ENST00000389253.9	3633	21	-163	29	-139	0	multi-exon	FALSE	canonical	0	0	junction_9	192.898807668684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAATAAAGGGAAGACG	10717905	False	NA	-6	True	NA	NA	NA	10717915	10831874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
WTC11_00043756	chr19	+	3767	21	FSM	ENSG00000079805.19	ENST00000355667.11	3633	21	-163	29	-139	0	multi-exon	FALSE	canonical	0	0	junction_9	225.41949782572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAATAAAGGGAAGACG	10717905	False	NA	-6	True	NA	NA	NA	10717915	10831874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
WTC11_00043757	chr19	+	3602	20	NIC	ENSG00000079805.19	novel	3633	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	269.737946082465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	10704095	True	NA	23	True	AATAAA	-29	NA	10718094	10831903	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
WTC11_00043762	chr19	+	5651	7	FSM	ENSG00000079805.19	ENST00000590806.5	5651	7	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	93.1583180517028	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGCTGCTGTGTGGGC	NA	False	NA	17	True	AATAAA	-23	NA	10808518	10831897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
WTC11_00043764	chr19	+	1943	5	FSM	ENSG00000079805.19	ENST00000593203.1	2507	5	564	0	564	0	multi-exon	FALSE	canonical	3	26	junction_4	353.060193168247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGGCTCATGCCTA	NA	False	NA	5	True	AATAAA	-13	NA	10823787	10833484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10832303
WTC11_00043766	chr19	+	3295	16	FSM	ENSG00000142453.12	ENST00000327064.9	3295	16	0	0	0	0	multi-exon	TRUE	canonical	3	1188	junction_14	93.3319999904761	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGAAAGTAGCAGAATC	10865085	True	NA	17	True	AATAAA	-22	NA	10871552	10923075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921374_10921444_10921614
WTC11_00043767	chr19	+	2722	15	FSM	ENSG00000142453.12	ENST00000344150.8	2722	15	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_14	303.142554194005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	10871679	False	NA	21	True	NA	NA	NA	10871702	10922721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921614
WTC11_00043770	chr19	+	1347	2	FSM	ENSG00000142444.7	ENST00000270502.7	1347	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTATTCTCTCTCGTTT	10926559	True	NA	31	True	AATAAA	-27	NA	10928810	10930254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10928917_10929013
WTC11_00043771	chr19	+	5918	34	FSM	ENSG00000127616.20	ENST00000646484.1	5579	34	-40	-299	-40	110	multi-exon	FALSE	canonical	3	401	junction_1	218.090603828823	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGATGCCACATAGAG	10960833	False	NA	NA	False	NA	NA	NA	10960891	11062578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043772	chr19	+	5337	34	NNC	ENSG00000127616.20	novel	5777	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	297.895458703026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTAAAGAGAGAGAGAG	10960821	False	NA	-88	True	NA	NA	NA	10960931	11062028	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035132_11041296_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043773	chr19	+	5675	35	FSM	ENSG00000127616.20	ENST00000642726.1	5675	35	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_29	341.129871310541	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTGCAGGTGGACT	10960821	False	NA	23	True	AATAAA	-24	NA	10960931	11062279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043774	chr19	+	5637	35	FSM	ENSG00000127616.20	ENST00000642628.1	5637	35	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_29	324.369966908969	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAAAACGCACAGCCT	10960846	False	NA	7	True	AATAAA	-8	NA	10960956	11062263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043775	chr19	+	5554	34	FSM	ENSG00000127616.20	ENST00000647230.1	5554	34	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_1	186.791575681662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	10960846	False	NA	20	True	AATAAA	-21	NA	10960956	11062276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043776	chr19	+	758	5	FSM	ENSG00000127616.20	ENST00000644760.1	740	5	-18	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	593.035622876063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCAGGCCTTGGGGCA	10938552	True	NA	NA	False	NA	NA	NA	10960991	10986304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10980776_10980853_10984123_10984374_10985272_10985406_10986188
WTC11_00043777	chr19	+	5570	34	NIC	ENSG00000127616.20	novel	5577	35	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	627	junction_29	210.770356669738	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	10960824	False	NA	17	True	AATAAA	-18	NA	10960934	11062273	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043778	chr19	+	5674	36	FSM	ENSG00000127616.20	ENST00000429416.8	5665	36	-9	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	406.62956717135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAACCAACAACAAAACGC	10938552	True	NA	0	True	AATAAA	-1	NA	10960991	11062256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10980776_10980853_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043779	chr19	+	5595	35	FSM	ENSG00000127616.20	ENST00000646510.1	5595	35	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	332.038711421354	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	10938552	True	NA	20	True	AATAAA	-21	NA	10960991	11062276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10980776_10980853_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043780	chr19	+	5470	34	FSM	ENSG00000127616.20	ENST00000645460.1	5457	34	-13	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	238.507218541918	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACAGCCTTGCCTGCA	10938590	True	NA	15	True	AATAAA	-16	NA	10961029	11062271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043781	chr19	+	5577	35	FSM	ENSG00000127616.20	ENST00000344626.10	5577	35	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_26	317.913081688455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	10938590	True	NA	17	True	AATAAA	-18	NA	10961029	11062273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043782	chr19	+	5670	36	FSM	ENSG00000127616.20	ENST00000646693.2	5670	36	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_30	411.386073201913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	10938590	True	NA	17	True	AATAAA	-18	NA	10961029	11062273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043783	chr19	+	5755	34	FSM	ENSG00000127616.20	ENST00000590574.6	5739	34	-16	0	-16	0	multi-exon	FALSE	canonical	3	24	junction_1	265.899972216954	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	10961182	True	NA	17	True	AATAAA	-18	NA	10961304	11062273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961730_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043785	chr19	+	3940	27	FSM	ENSG00000127616.20	ENST00000643208.1	3940	27	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_18	362.962816163254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAACAACAAAACGCAC	10994839	False	NA	2	True	AATAAA	-3	NA	10994851	11062258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043788	chr19	+	3522	25	FSM	ENSG00000127616.20	ENST00000647268.1	3522	25	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	297.516313161518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATGCATGTGCGTCAC	10996137	True	NA	24	True	NA	NA	NA	10996263	11062140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10996381_10996496_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00043798	chr19	+	2791	17	FSM	ENSG00000130164.14	ENST00000535915.5	2768	17	-23	0	-22	0	multi-exon	FALSE	canonical	1	2	junction_2	82.9773124112851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGACCAGGATGACACC	11080765	True	NA	NA	False	NA	NA	NA	11089439	11131538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11089616_11100222_11100346_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
WTC11_00043800	chr19	+	5214	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	-45	4	-44	0	multi-exon	FALSE	canonical	3	267	junction_4	34.6482073114352	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTGTCTAAACTCGAT	11080743	True	NA	15	True	ATTAAA	-14	NA	11089417	11133816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
WTC11_00043802	chr19	+	605	5	FSM	ENSG00000130164.14	ENST00000559340.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	121.632643644706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCCAGTATCTGTGCC	11113359	False	NA	NA	False	NA	NA	NA	11113370	11120406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11113450_11113534_11113763_11116093_11116213_11120091_11120234_11120369
WTC11_00043803	chr19	+	1061	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	-12	0	2	0	multi-exon	FALSE	canonical	3	7	junction_5	5.5937465083788	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	11346248	True	NA	6	True	AATAAA	-21	NA	11346506	11354944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
WTC11_00043805	chr19	+	2727	10	FSM	ENSG00000105520.11	ENST00000251473.9	2727	10	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	7.76029781788188	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCCATCTGCCTTCCT	11355127	False	NA	31	True	AATAAA	-44	NA	11355385	11365698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363820_11364160_11364213_11364346
WTC11_00043807	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11373451	True	NA	NA	False	NA	NA	NA	11374706	11376951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11374930_11375512
WTC11_00043808	chr19	+	804	8	FSM	ENSG00000130175.10	ENST00000676823.1	814	8	10	0	10	0	multi-exon	FALSE	canonical	2	26	junction_1	349.53998924534	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGATGCTGCGGACAG	11435260	False	NA	NA	False	AAAAAG	-42	NA	11435293	11442432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435444_11435644_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385
WTC11_00043811	chr19	+	2074	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	-11	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	213.590576234195	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413575	True	NA	15	True	AATAAA	-16	NA	11435623	11450965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00043812	chr19	+	2395	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	-302	3	49	0	multi-exon	TRUE	canonical	3	261	junction_11	193.48377792037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11435299	False	NA	15	True	AATAAA	-16	NA	11435332	11450965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00043813	chr19	+	2072	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	485	junction_11	145.584373091968	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413586	True	NA	15	True	AATAAA	-16	NA	11435634	11450965	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00043814	chr19	+	2111	18	FSM	ENSG00000130175.10	ENST00000592741.5	2100	18	-11	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	285.306464256793	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413575	True	NA	18	True	AATAAA	-19	NA	11435623	11450968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435711_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00043815	chr19	+	2189	17	FSM	ENSG00000130175.10	ENST00000587327.5	2189	17	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	216.349399120959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCACCCCCAGCCCTG	11435695	False	NA	-83	True	NA	NA	NA	11435744	11450867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00043823	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7.85281265959316	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11537888	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
WTC11_00043825	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	6.18241233033047	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	11595007	True	NA	39	True	CATAAA	-23	NA	11597482	11619161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
WTC11_00043826	chr19	+	4709	4	FSM	ENSG00000171295.13	ENST00000304060.10	4215	4	-7	-487	-7	487	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAACAGCCTGCTTATC	11813253	True	NA	NA	False	NA	NA	NA	11814265	11835703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11814451_11830282_11830410_11830616_11830678_11831367
WTC11_00043827	chr19	+	2274	1	FSM	ENSG00000171291.9	ENST00000592495.1	2385	1	6	105	6	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACAGAGTGAGACCC	11848186	True	NA	NA	False	NA	NA	NA	11848731	11851005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11848700_11851000
WTC11_00043828	chr19	+	2937	4	NIC	ENSG00000171291.9	novel	2574	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	8.33999733546454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAATGTTACATTGTT	11848200	True	NA	NA	False	AATAAA	-30	NA	11848745	11869486	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11849314_11866204_11866332_11866536_11866598_11867305
WTC11_00043830	chr19	+	605	4	FSM	ENSG00000171291.9	ENST00000442091.5	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	9.7410927974683	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATCTTCTAATATGAA	11848517	False	NA	NA	False	AGTAAA	-38	NA	11849062	11867462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11849314_11866195_11866332_11866536_11866598_11867305
WTC11_00043832	chr19	+	591	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	-22	0	14	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8012344973464	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	11885031	True	NA	NA	False	NA	NA	NA	11887795	11904902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
WTC11_00043833	chr19	+	8973	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	23	-6555	-13	-1078	multi-exon	FALSE	canonical	3	26	junction_2	2.05480466765633	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTTAAATTGTTATTA	11885040	True	NA	NA	False	AATAAA	-35	NA	11887804	11913251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
WTC11_00043835	chr19	+	1702	5	NIC	ENSG00000198429.10	novel	1438	5	NA	NA	0	222	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	8.98262211161084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGCCTGTCTTTCTCTG	11885090	True	NA	5	True	AATAAA	-20	NA	11887854	11914551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648_11904888_11913408
WTC11_00043836	chr19	+	2877	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	-34	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	8.17856276425687	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	11924019	True	NA	23	True	AATAAA	-25	NA	11925072	11950763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
WTC11_00043837	chr19	+	678	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	-56	0	-2	0	multi-exon	FALSE	canonical	3	120	junction_2	1.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985442	True	NA	4	True	AATAAA	-20	NA	11987614	12003811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11987824_12001773_12001823_12003391
WTC11_00043839	chr19	+	4364	1	FSM	ENSG00000219665.8	ENST00000592187.1	4000	1	-276	-88	-276	88	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGCTCACCATGATAA	NA	False	NA	NA	False	NA	NA	NA	12022918	12027282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12022900_12027300
WTC11_00043840	chr19	+	3862	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-19	1705	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATTTATGTCTGATC	12088050	True	NA	7	True	NA	NA	NA	12092243	12114753	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12092471_12110304_12110432_12111245
WTC11_00043844	chr19	+	388	1	ISM	ENSG00000213290.4	ENST00000431702.2	1214	2	196	951	196	-951	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCGAGGCCTTGGA	12559701	False	NA	NA	False	NA	NA	NA	12559766	12560154	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_12559800_12560200
WTC11_00043847	chr19	+	6457	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	8	0	8	0	multi-exon	FALSE	canonical	3	59	junction_3	4.98887651569859	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	12607503	True	NA	NA	False	AGTAAA	-21	NA	12610927	12633834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
WTC11_00043850	chr19	+	1450	11	FSM	ENSG00000123154.12	ENST00000418543.8	1450	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	43.7236777959037	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	12665999	True	NA	22	True	AATAAA	-34	NA	12666806	12675832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
WTC11_00043854	chr19	+	1416	8	NNC	ENSG00000198356.12	novel	1368	8	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	520.503523876013	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	NA	False	NA	15	True	AATAAA	-16	NA	12737053	12748323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_12737157_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
WTC11_00043855	chr19	+	1353	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	15	0	15	0	multi-exon	FALSE	canonical	0	0	junction_5	520.952424479845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	12737119	False	NA	15	True	AATAAA	-16	NA	12737153	12748323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
WTC11_00043858	chr19	+	2011	10	FSM	ENSG00000039987.7	ENST00000553030.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	3.01846171271247	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGTCTGATTTCTC	12751381	True	NA	9	True	AATAAA	-23	NA	12751790	12758458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12751840_12752541_12752745_12753259_12753355_12754551_12754786_12754876_12755032_12755378_12755457_12755614_12755768_12755854_12755936_12756140_12756296_12757650
WTC11_00043859	chr19	+	1831	1	FSM	ENSG00000171223.6	ENST00000302754.6	1830	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTGTCTTTTTTTCC	12789257	True	NA	16	True	AGTAAA	-23	NA	12791484	12793315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12791500_12793300
WTC11_00043860	chr19	+	1317	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	-131	-308	-38	308	multi-exon	FALSE	canonical	3	827	junction_3	86.6833317310773	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTGCAGATTCAG	12793334	True	NA	9	True	AATAAA	-37	NA	12806545	12808284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
WTC11_00043861	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	827	junction_3	67.5398597352795	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12793372	True	NA	17	True	AATAGA	-20	NA	12806583	12813640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
WTC11_00043862	chr19	+	1252	6	FSM	ENSG00000104889.7	ENST00000593017.2	1245	6	-7	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	44.6569143582492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTAGGGGATGT	12793465	True	NA	8	True	ATTAAA	-13	NA	12806676	12813525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12807080_12807205_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
WTC11_00043864	chr19	+	829	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	21	-111	21	111	multi-exon	FALSE	canonical	2	9	junction_1	10	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCGTGAGGGAGGGGTCG	12825613	True	NA	28	True	TATAAA	-31	NA	12825731	12833094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12825913_12826784_12826893_12832554
WTC11_00043865	chr19	+	1854	13	FSM	ENSG00000105613.10	ENST00000591495.5	1496	13	-58	-300	-58	243	multi-exon	TRUE	canonical	3	9	junction_2	15.4371485565034	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTCCCAGGCTCAAGCGA	12833431	True	NA	NA	False	NA	NA	NA	12833892	12859164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12834007_12838268_12838301_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
WTC11_00043866	chr19	+	4972	26	FSM	ENSG00000105613.10	ENST00000251472.9	4853	26	-119	0	-77	0	multi-exon	FALSE	canonical	3	14	junction_16	14.4318536577946	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	12837934	False	NA	23	True	AATAAA	-20	NA	12838395	12874952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
WTC11_00043869	chr19	+	1884	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	-17	0	-17	0	multi-exon	FALSE	canonical	3	354	junction_1	33.4789486095367	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	12885536	True	NA	-15	True	NA	NA	NA	12891142	12899946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
WTC11_00043870	chr19	+	1869	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	-17	0	-17	0	multi-exon	FALSE	canonical	3	274	junction_1	57.0316716417109	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	12885536	True	NA	38	True	NA	NA	NA	12891142	12899999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
WTC11_00043871	chr19	+	2112	13	NNC	ENSG00000105607.13	novel	1852	12	NA	NA	-17	-245	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	127.896741119111	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCAGCGCCCCCCCTGT	12885536	True	NA	NA	False	NA	NA	NA	12891142	12900425	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467_12900051_12900233
WTC11_00043876	chr19	+	1748	11	NIC	ENSG00000105607.13	novel	1852	12	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	138.464291425624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATAAAGACCTGCAC	12885565	True	NA	-18	True	NA	NA	NA	12891171	12899943	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12891203_12891270_12891396_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
WTC11_00043879	chr19	+	971	1	FSM	ENSG00000240616.1	ENST00000464444.1	748	1	-180	-43	-180	43	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCACAAGGCCCTGT	12893935	False	NA	NA	False	NA	NA	NA	12893952	12894923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12894000_12894900
WTC11_00043880	chr19	+	959	3	FSM	ENSG00000179218.15	ENST00000587486.6	957	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	2768	junction_2	161	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGGGGGTGGTGGC	12938562	False	NA	NA	False	NA	NA	NA	12938575	12940147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12939236_12939427_12939632_12940052
WTC11_00043882	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_3	281.249194443291	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
WTC11_00043884	chr19	+	1661	8	FSM	ENSG00000179218.15	ENST00000588454.6	1661	8	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	1115.8936749877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734611	True	NA	25	True	ATTAAA	-17	NA	12938644	12944489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12938771_12939133_12939236_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
WTC11_00043885	chr19	+	1045	6	FSM	ENSG00000179262.10	ENST00000588329.5	1034	6	-11	0	0	0	multi-exon	FALSE	canonical	3	808	junction_5	262.691149451214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCTGGAGTTCCTGCG	12933549	True	NA	NA	False	NA	NA	NA	12945854	12949282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12949160_12949277
WTC11_00043886	chr19	+	1757	9	FSM	ENSG00000179262.10	ENST00000316856.7	1736	9	-21	0	0	0	multi-exon	FALSE	canonical	3	808	junction_6	211.815330830891	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTTAAAAACTAG	12933549	True	NA	-5	True	GATAAA	-13	NA	12945854	12953623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
WTC11_00043887	chr19	+	1779	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	-7	0	0	0	multi-exon	FALSE	canonical	3	545	junction_6	295.16510210389	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	12933549	True	NA	14	True	AATAAA	-14	NA	12945854	12953642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
WTC11_00043888	chr19	+	1693	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	-2	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	473.52017842432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	12933586	False	NA	-15	True	GATAAA	-3	NA	12945891	12953613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
WTC11_00043889	chr19	+	507	2	FSM	ENSG00000179262.10	ENST00000591467.1	545	2	38	0	38	0	multi-exon	FALSE	canonical	3	1421	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAGAACTTGGCT	12952384	False	NA	NA	False	NA	NA	NA	12952401	12952990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12952854_12952935
WTC11_00043890	chr19	+	710	3	FSM	ENSG00000160877.6	ENST00000586171.2	717	3	7	0	7	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACGGAGCAGCAGGAGT	13115845	False	NA	NA	False	NA	NA	NA	13116868	13135704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13116936_13117993_13118132_13135199
WTC11_00043891	chr19	+	4524	6	FSM	ENSG00000160877.6	ENST00000292431.5	4524	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	10.7962956610126	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	13108690	True	NA	16	True	AATAAA	-21	NA	13118263	13141147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13118455_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
WTC11_00043892	chr19	+	2934	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	13151959	False	NA	23	True	AATAAA	-19	NA	13151974	13154908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13152000_13154900
WTC11_00043893	chr19	+	1844	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	1090	0	1090	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	13125941	True	NA	23	True	AATAAA	-19	NA	13153064	13154908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13153100_13154900
WTC11_00043894	chr19	+	1929	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	-9	2	-9	-2	multi-exon	FALSE	canonical	3	8	junction_1	40.3286498658212	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGGTTGTTAGATGG	13731304	True	NA	13	True	ATTAAA	-19	NA	13731750	13763294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
WTC11_00043896	chr19	+	1828	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	-45	0	-45	0	multi-exon	FALSE	canonical	3	63	junction_1	17.4409718765899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	NA	False	NA	-2	True	ATTAAA	-4	NA	13747818	13763279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
WTC11_00043897	chr19	+	1663	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	10	0	0	multi-exon	FALSE	canonical	3	60	junction_7	21.8428732338745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	13746143	True	NA	-2	True	ATTAAA	-4	NA	13747894	13763279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
WTC11_00043903	chr19	+	3178	6	FSM	ENSG00000037757.14	ENST00000040663.8	3178	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	5.69209978830308	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	13761612	True	NA	25	True	AATAAA	-20	NA	13764521	13774282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120
WTC11_00043905	chr19	+	807	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	-37	-266	-14	-48	multi-exon	FALSE	canonical	3	93	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCACAGGACCAAGGT	13757607	True	NA	NA	False	NA	NA	NA	13774441	13778725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13774575_13778051
WTC11_00043906	chr19	+	894	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	3	0	-3	multi-exon	FALSE	canonical	3	2783	junction_1	52.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACGTGGTACTACCTG	13757621	True	NA	NA	False	ATTAAA	-16	NA	13774455	13778770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13774575_13774651_13774708_13778051
WTC11_00043907	chr19	+	500	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	94	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	13774558	True	NA	17	True	AATAAA	-17	NA	13774814	13778462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13774904_13778051
WTC11_00043908	chr19	+	4757	14	FSM	ENSG00000132003.10	ENST00000590508.6	4731	14	-50	24	-50	0	multi-exon	FALSE	canonical	3	62	junction_5	10.7069628398738	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13793560	True	NA	117	True	NA	NA	NA	13795392	13832230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13814514_13814866_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
WTC11_00043909	chr19	+	4339	13	FSM	ENSG00000132003.10	ENST00000254323.6	4339	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	22.7998538007009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13793627	True	NA	117	True	NA	NA	NA	13795459	13832230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
WTC11_00043911	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	44.4680577860705	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	13903131	False	NA	NA	False	NA	NA	NA	13906441	13930659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043912	chr19	+	3581	29	FSM	ENSG00000132024.18	ENST00000318003.11	3581	29	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	30.2347954704982	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTCTGTCCTGTCTG	13902890	True	NA	19	True	AATAAA	-20	NA	13906200	13930879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043913	chr19	+	3564	29	NIC	ENSG00000132024.18	novel	3581	29	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_12	38.4158236955045	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCCCAGCTCTGTCCT	13902890	True	NA	14	True	AATAAA	-15	NA	13906200	13930874	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919940_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043914	chr19	+	2743	24	FSM	ENSG00000132024.18	ENST00000586955.5	2743	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	47.6305885735616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTCTGTCCTGTCTG	13913238	False	NA	19	True	AATAAA	-20	NA	13913252	13930879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043915	chr19	+	2435	17	FSM	ENSG00000132024.18	ENST00000589138.5	2435	17	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	35.9408694072639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCAGGCAGGCGCGG	13918492	False	NA	NA	False	NA	NA	NA	13918506	13929537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13928031_13928123_13928189_13929378_13929443_13929533
WTC11_00043916	chr19	+	2167	17	FSM	ENSG00000132024.18	ENST00000681846.1	2167	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	47.2584317873541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAAATAGCCAGGGCC	13919812	False	NA	-8	True	NA	NA	NA	13919826	13930852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13919940_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043918	chr19	+	2761	16	FSM	ENSG00000132024.18	ENST00000679637.1	2759	16	-2	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	23.9855512062297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCCCAGCTCTGTCCT	13920387	False	NA	14	True	AATAAA	-15	NA	13920401	13930874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043919	chr19	+	1972	17	FSM	ENSG00000132024.18	ENST00000679937.1	1972	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_14	52.1155192217251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCCAGGGCCAGCAC	13920487	False	NA	-30	True	NA	NA	NA	13920501	13930830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929643_13930077_13930155_13930241_13930290_13930374
WTC11_00043920	chr19	+	1662	15	FSM	ENSG00000132024.18	ENST00000587508.1	1667	15	5	0	5	0	multi-exon	FALSE	canonical	3	19	junction_9	55.3500917168276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCACATGGAATAAAATAGC	NA	False	NA	-15	True	NA	NA	NA	13923332	13930845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
WTC11_00043921	chr19	+	2298	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-37	0	-37	0	multi-exon	FALSE	canonical	3	327	junction_7	37.0100399291267	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13944850	True	NA	22	True	AATAAA	-22	NA	13952471	13961449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
WTC11_00043922	chr19	+	815	3	FSM	ENSG00000132017.11	ENST00000585468.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATCAGTTCTGTTCTTT	13956385	True	NA	NA	False	NA	NA	NA	13956408	13959847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13956523_13959044_13959480_13959581
WTC11_00043923	chr19	+	711	6	FSM	ENSG00000132017.11	ENST00000587307.1	711	6	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	41.6336402443985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGTGTTAGCCTGCG	13959537	False	NA	NA	False	NA	NA	NA	13959560	13961101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
WTC11_00043927	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	12.4396769302976	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	14029932	True	NA	10	True	AATAAA	-21	NA	14031761	14053218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
WTC11_00043928	chr19	+	667	1	FSM	ENSG00000141854.10	ENST00000591982.1	2187	1	1514	6	808	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCACTGCAGCCTGTTTT	14074296	False	NA	NA	False	AATAAA	-13	NA	14074389	14075056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14074400_14075100
WTC11_00043929	chr19	+	2741	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	10	0	10	0	multi-exon	FALSE	canonical	2	4	junction_8	3.47208342667617	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	NA	False	NA	NA	False	NA	NA	NA	14381165	14408275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
WTC11_00043930	chr19	+	3071	19	FSM	ENSG00000123146.20	ENST00000357355.7	3054	19	-19	2	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.13655788199695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGCCTGCTGGTG	14381397	False	NA	9	True	ATTAAA	-16	NA	14381415	14408723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14396341_14396474_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
WTC11_00043931	chr19	+	3138	22	FSM	ENSG00000123143.13	ENST00000242783.11	3120	22	-18	0	-18	0	multi-exon	FALSE	canonical	3	733	junction_5	74.2915138151277	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCATCCTCCGTGTCT	14433276	False	NA	17	True	AAAAAG	-20	NA	14433287	14471859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14433543_14441142_14441444_14443469_14443622_14446425_14446562_14450317_14450464_14450895_14451110_14451828_14452024_14458030_14458141_14458231_14458376_14463666_14463743_14463827_14463970_14464059_14464154_14467564_14467642_14467717_14467794_14467875_14467968_14469340_14469518_14469751_14469815_14469911_14469989_14470162_14470306_14470574_14470683_14470770_14470852_14471580
WTC11_00043933	chr19	+	848	6	FSM	ENSG00000123143.13	ENST00000590097.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	387.840482672967	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGGGCGGAGCTTTC	14432939	True	NA	NA	False	NA	NA	NA	14433492	14450461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14433543_14434589_14434655_14441142_14441444_14443469_14443622_14446425_14446562_14450317
WTC11_00043937	chr19	+	436	1	FSM	ENSG00000224543.4	ENST00000600149.1	222	1	-74	-140	-74	140	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTCAGATGTTCTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	14489313	14489749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14489300_14489700
WTC11_00043939	chr19	+	1158	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	-24	5	-9	0	multi-exon	FALSE	canonical	3	1352	junction_5	91.7154415691394	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	14501101	True	NA	3	True	AATAAA	-16	NA	14529569	14565975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
WTC11_00043940	chr19	+	1190	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	-22	2	-9	0	multi-exon	FALSE	canonical	3	110	junction_2	407.909329181539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	14501101	True	NA	3	True	AATAAA	-16	NA	14529569	14565975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
WTC11_00043941	chr19	+	1223	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	-24	5	-9	0	multi-exon	FALSE	canonical	2	6	junction_2	435.96549143507	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	14501101	True	NA	3	True	AATAAA	-16	NA	14529569	14565975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
WTC11_00043947	chr19	+	1180	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	-16	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	94.8614474635298	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	14501172	True	NA	6	True	AATAAA	-19	NA	14529640	14565978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
WTC11_00043952	chr19	+	660	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	-76	0	-76	0	multi-exon	FALSE	canonical	3	1452	junction_3	54.8357547590986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	14564584	False	NA	-47	True	NA	NA	NA	14564617	14565925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
WTC11_00043954	chr19	+	508	3	FSM	ENSG00000099797.15	ENST00000598408.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14564908	False	NA	8	True	AATAAA	-21	NA	14564941	14565980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14565124_14565201_14565291_14565743
WTC11_00043955	chr19	+	802	5	FSM	ENSG00000160961.12	ENST00000596285.5	573	5	9	-238	-5	238	multi-exon	FALSE	canonical	3	60	junction_2	5.52268050859363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTCACTGTGTTGGC	14688713	True	NA	NA	False	NA	NA	NA	14690063	14699649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198
WTC11_00043956	chr19	+	4715	12	FSM	ENSG00000160961.12	ENST00000292530.11	4716	12	1	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	13.1915324707033	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGACATAGGTATTC	14688698	True	NA	NA	False	AATAAA	-28	NA	14690048	14721899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717090_14717656_14717734_14718227
WTC11_00043957	chr19	+	549	6	FSM	ENSG00000160961.12	ENST00000601629.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	27.2514219812471	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGGCTCCTGATGAG	14688748	True	NA	NA	False	NA	NA	NA	14690098	14700355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14700205
WTC11_00043958	chr19	+	2059	7	ISM	ENSG00000105137.13	ENST00000342784.7	3252	8	-65	2246	-65	-894	5prime_fragment	FALSE	canonical	3	87	junction_1	7.40307743817094	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTTTGTCTTTTT	15106119	True	NA	11	True	AGTAAA	-43	NA	15107335	15112728	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345
WTC11_00043959	chr19	+	543	2	FSM	ENSG00000105137.13	ENST00000597977.5	539	2	-4	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCCTCCTCCCAGAGGA	15106184	True	NA	NA	False	NA	NA	NA	15107400	15109477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15107522_15109055
WTC11_00043960	chr19	+	3339	8	FSM	ENSG00000105137.13	ENST00000342784.7	3252	8	-87	0	-87	0	multi-exon	FALSE	canonical	3	82	junction_7	8.66849797501604	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	15106097	True	NA	18	True	AATAAA	-16	NA	15107313	15114974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
WTC11_00043961	chr19	+	3832	5	FSM	ENSG00000105137.13	ENST00000600252.5	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	10.0343161201947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	15107616	False	NA	18	True	AATAAA	-16	NA	15108832	15114974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
WTC11_00043962	chr19	+	571	4	FSM	ENSG00000105137.13	ENST00000602203.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	41.6679999786674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCACCTGCCGCTGGCA	15109364	False	NA	NA	False	NA	NA	NA	15110580	15113622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15110736_15111312_15111440_15112345_15112572_15113559
WTC11_00043963	chr19	+	1834	1	FSM	ENSG00000268189.2	ENST00000597549.1	1771	1	27	-90	27	90	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGCAACCTGTAACAAGG	NA	False	NA	NA	False	AAAAAG	-41	NA	15379102	15380936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15379100_15380900
WTC11_00043964	chr19	+	2644	14	FSM	ENSG00000171954.13	ENST00000269703.8	2609	14	-36	1	-36	0	multi-exon	TRUE	canonical	2	9	junction_7	2.76281307631815	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTTCATTTATT	15508351	True	NA	1	True	CATAAA	-18	NA	15508488	15552316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15508584_15523692_15523800_15525335_15525559_15529708_15529854_15537360_15537415_15537534_15537663_15537871_15537994_15540449_15540718_15543970_15544038_15544149_15544280_15548107_15548242_15549137_15549203_15550673_15550757_15551293
WTC11_00043965	chr19	+	488	1	FSM	ENSG00000225067.4	ENST00000471227.3	466	1	34	-56	34	56	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTCTCTGTCAATTTC	NA	False	NA	11	True	AATATA	-26	NA	15611690	15612178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15611700_15612200
WTC11_00043966	chr19	+	336	1	FSM	ENSG00000279717.1	ENST00000623833.1	2679	1	1985	358	1985	-358	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCAGGAGATTTT	15906481	False	NA	NA	False	TTTAAA	-32	NA	15906540	15906876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15906500_15906900
WTC11_00043967	chr19	+	2480	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	-6	0	0	0	multi-exon	FALSE	canonical	3	2686	junction_2	105.607088506677	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	16034683	True	NA	11	True	AATAAA	-16	NA	16076488	16103002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
WTC11_00043968	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1245.78978463463	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	16076093	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
WTC11_00043969	chr19	+	4860	8	FSM	ENSG00000167460.17	ENST00000658224.1	4894	8	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_1	1016.33485161744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCATATGTAATAGTA	16078861	False	NA	13	True	AATAAA	-24	NA	16078885	16102938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16081539_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
WTC11_00043973	chr19	+	2946	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	-379	0	-379	0	multi-exon	FALSE	canonical	3	943	junction_6	82.8551723903628	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	16111479	False	NA	16	True	NA	NA	NA	16111509	16134234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
WTC11_00043974	chr19	+	2928	8	FSM	ENSG00000167461.12_ENSG00000196684.12	ENST00000586682.1	1315	8	-387	-1226	-379	2	multi-exon	FALSE	canonical	3	8	junction_6	383.057889800975	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAATGTGTCTTTTGTG	16111479	False	NA	18	True	NA	NA	NA	16111509	16134236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129573_16129605_16132211
WTC11_00043976	chr19	+	1436	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	-40	-598	3	0	multi-exon	FALSE	canonical	3	48	junction_2	518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	16175615	True	NA	19	True	AATAAA	-21	NA	16185382	16192046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185517_16185623_16185766_16190886
WTC11_00043978	chr19	+	1472	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	987	junction_2	40.8765077873452	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	16175633	True	NA	19	True	AATAAA	-21	NA	16185400	16192046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
WTC11_00043979	chr19	+	896	5	FSM	ENSG00000105058.12	ENST00000585831.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	532.34311069084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGGGCGCCCTTCCAAG	16175665	True	NA	NA	False	NA	NA	NA	16185432	16191378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185517_16185623_16185766_16189387_16189512_16190519_16190574_16190886
WTC11_00043980	chr19	+	11793	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	-12	1078	-12	-1078	multi-exon	FALSE	canonical	3	299	junction_6	26.5227175352479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCGTCTCAAAATAAATAAA	16197339	True	NA	NA	False	NA	NA	NA	16197898	16244828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
WTC11_00043983	chr19	+	982	4	FSM	ENSG00000105072.9	ENST00000601288.1	439	4	-41	-502	-5	3	multi-exon	FALSE	canonical	3	18	junction_2	10.6144555520604	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTGTGTTTCTGTTT	NA	False	NA	24	True	AGTAAA	-35	NA	16513027	16518622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16513110_16514496_16514664_16517229_16517342_16518001
WTC11_00043984	chr19	+	398	1	FSM	ENSG00000279529.1	ENST00000623966.1	2717	1	11	2308	11	-2308	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCCGCATTTCACAGAC	16572490	True	NA	NA	False	NA	NA	NA	16572634	16573032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16572600_16573000
WTC11_00043985	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.3802567467755	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	16659956	True	NA	NA	False	AATAAA	-15	NA	16661138	16690023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
WTC11_00043987	chr19	+	5861	19	NIC	ENSG00000127511.10	novel	5129	20	NA	NA	-27	0	intron_retention	FALSE	canonical	3	31	junction_9	110.396032313744	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	16818989	True	NA	23	True	ATTAAA	-20	NA	16829370	16880349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
WTC11_00043988	chr19	+	3942	8	FSM	ENSG00000127511.10	ENST00000596802.5	2556	8	0	-1386	0	1386	multi-exon	FALSE	canonical	3	333	junction_7	27.6767050061961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTACAAAATATAGTAATT	16819025	True	NA	37	True	NA	NA	NA	16829406	16857131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142
WTC11_00043995	chr19	+	2962	3	FSM	ENSG00000127511.10	ENST00000601141.5	1473	3	-192	-1297	-192	4	multi-exon	FALSE	canonical	3	207	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGAGGGTGTGTTGGTCTT	NA	False	NA	31	True	ATTAAA	-28	NA	16876746	16880357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16877640_16878182_16878391_16878496
WTC11_00043996	chr19	+	7712	39	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_28	31.049520361536	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	17071903	True	NA	5	True	AATAAA	-12	NA	17075785	17213284	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
WTC11_00043997	chr19	+	7604	40	FSM	ENSG00000099331.14	ENST00000594824.5	7595	40	-9	0	0	0	multi-exon	FALSE	canonical	3	57	junction_39	36.9523566243351	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	17071894	True	NA	5	True	AATAAA	-12	NA	17075776	17213284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
WTC11_00043998	chr19	+	7801	40	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	1	-3	intron_retention	FALSE	canonical	3	12	junction_15	46.9226565765115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTGTGCATGGGAC	17071904	True	NA	2	True	AATAAA	-9	NA	17075786	17213281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
WTC11_00044009	chr19	+	934	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	-89	0	-78	0	multi-exon	FALSE	canonical	0	0	junction_5	37.4754341304448	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17215255	False	NA	9	True	AATAAA	-16	NA	17215267	17219829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
WTC11_00044010	chr19	+	596	4	FSM	ENSG00000053501.14	ENST00000601592.5	575	4	-21	0	-4	0	multi-exon	FALSE	canonical	3	51	junction_3	23.3285709425636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCCAGCTGACTAGGA	17214512	True	NA	NA	False	NA	NA	NA	17215370	17217489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17216071_17216168_17216322_17217452
WTC11_00044011	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	26.8001865665148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	17214529	True	NA	NA	False	NA	NA	NA	17215387	17218826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
WTC11_00044012	chr19	+	754	7	FSM	ENSG00000053501.14	ENST00000594724.5	744	7	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.6712182262602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCACCTTGTCTGTCTT	17214529	True	NA	-1	True	AATAAA	-6	NA	17215387	17219819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
WTC11_00044013	chr19	+	639	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.4928309885872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214529	True	NA	9	True	AATAAA	-16	NA	17215387	17219829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
WTC11_00044014	chr19	+	760	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	16	-189	16	0	multi-exon	FALSE	canonical	0	0	junction_4	40.3956130731489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17215154	True	NA	9	True	AATAAA	-16	NA	17215735	17219829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
WTC11_00044015	chr19	+	1036	5	NIC	ENSG00000099330.9	novel	878	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	41	junction_4	66.3814733189917	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224448	True	NA	14	True	AATAAA	-14	NA	17226214	17229215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17229008
WTC11_00044016	chr19	+	1219	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	-18	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	37.9275625370258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	17224458	True	NA	1	True	AATAAA	-1	NA	17226224	17229202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
WTC11_00044017	chr19	+	1132	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	-22	1	-9	0	multi-exon	FALSE	canonical	3	107	junction_1	39.5848455851479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	17224437	True	NA	17	True	AATAAA	-17	NA	17226203	17229218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
WTC11_00044018	chr19	+	1084	5	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	18	intron_retention	FALSE	canonical	3	25	junction_1	82.802475808396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGATTTCACTCAGT	17224459	True	NA	36	True	AATAAA	-36	NA	17226225	17229237	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226354_17226692_17227200_17227839_17228006_17228255_17228310_17229008
WTC11_00044019	chr19	+	1039	3	NIC	ENSG00000099330.9	novel	1201	5	NA	NA	7	-4	intron_retention	FALSE	canonical	3	14	junction_1	69.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACACCTACTGAGTATAA	17225679	False	NA	8	True	AATAAA	-8	NA	17226621	17229209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17227200_17228255_17228310_17228802
WTC11_00044022	chr19	+	1482	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	-10	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	283.316491533762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250499	True	NA	16	True	AATAAA	-18	NA	17267375	17279337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
WTC11_00044026	chr19	+	1383	9	FSM	ENSG00000105393.16	ENST00000598188.6	1377	9	-6	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	130.858165106347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250560	True	NA	16	True	AATAAA	-18	NA	17267436	17279337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
WTC11_00044027	chr19	+	1372	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	-6	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	356.554256039666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250560	True	NA	16	True	AATAAA	-18	NA	17267436	17279337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
WTC11_00044036	chr19	+	3301	9	FSM	ENSG00000160117.16	ENST00000394458.7	3218	9	-83	0	-83	0	multi-exon	FALSE	canonical	3	15	junction_1	15.7856738848869	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGAACTCGCCCTGGA	NA	False	NA	13	True	AATAAA	-16	NA	17281561	17287646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283963_17284088_17284267_17285430_17285591_17285680_17285820_17286379
WTC11_00044040	chr19	+	1051	3	FSM	ENSG00000130312.7	ENST00000595444.1	863	3	0	-188	0	0	multi-exon	FALSE	canonical	3	41	junction_1	438	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	17290848	True	NA	24	True	AATAAA	-20	NA	17292608	17306843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17292855_17305830_17305958_17306165
WTC11_00044042	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	19.1229574072631	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	17300757	True	NA	5	True	AATAAA	-16	NA	17309562	17323298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
WTC11_00044043	chr19	+	1382	6	NNC	ENSG00000130311.11	novel	502	6	NA	NA	-21	0	intron_retention	FALSE	canonical	2	9	junction_1	251.710945332141	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGAGAAGGGCCCCC	17309400	False	NA	90	True	NA	NA	NA	17309496	17320367	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17309658_17312114_17312319_17314022_17314104_17314337_17314390_17315933_17315996_17319545
WTC11_00044044	chr19	+	312	3	FSM	ENSG00000130311.11	ENST00000596925.1	560	3	-11	259	0	-259	multi-exon	FALSE	canonical	3	488	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCCCGGCCCAGGCCAT	17300757	True	NA	NA	False	NA	NA	NA	17309562	17314473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17309658_17314022_17314104_17314337
WTC11_00044045	chr19	+	508	6	FSM	ENSG00000130311.11	ENST00000596582.1	502	6	-6	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	205.413339391579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGAGAAGGGCCCCC	17300757	True	NA	90	True	NA	NA	NA	17309562	17320367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545_17319726_17320329
WTC11_00044046	chr19	+	830	4	FSM	ENSG00000130299.17	ENST00000600995.5	812	4	-18	0	-14	0	multi-exon	FALSE	canonical	3	4	junction_1	134.601469366258	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCGTGGCTGGGCCGA	17335760	True	NA	NA	False	NA	NA	NA	17336709	17338708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337035_17338007_17338256_17338364_17338452_17338538
WTC11_00044052	chr19	+	2637	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	-845	701	-14	0	multi-exon	FALSE	canonical	3	57	junction_7	77.9870782565933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTGATCTAGAAGTGT	17335760	True	NA	64	True	NA	NA	NA	17336709	17342022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
WTC11_00044053	chr19	+	2606	9	FSM	ENSG00000130299.17	ENST00000324894.13	2566	9	-36	-4	0	4	multi-exon	FALSE	canonical	3	225	junction_1	35.7351367704113	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATTTCTTTTTAAAAA	17337494	False	NA	36	True	TATAAA	-27	NA	17337516	17342735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
WTC11_00044060	chr19	+	809	3	FSM	ENSG00000141971.13	ENST00000528997.5	786	3	1	-24	1	24	multi-exon	FALSE	canonical	3	361	junction_1	46.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCACAACCCTAGTGC	17415045	True	NA	NA	False	NA	NA	NA	17420048	17421070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17420226_17420312_17420412_17420537
WTC11_00044061	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	39.3215907613108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	17415043	True	NA	11	True	AATAAA	-19	NA	17420046	17425332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
WTC11_00044062	chr19	+	1135	10	NNC	ENSG00000141971.13	novel	1154	10	NA	NA	0	0	intron_retention	TRUE	non_canonical	2	105	junction_9	98.4626268636425	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTTCTCGCCCTCTGG	17415118	True	NA	-3	True	AATAAA	-5	NA	17420121	17425318	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930_17425059_17425084
WTC11_00044063	chr19	+	1114	8	NIC	ENSG00000141971.13	novel	1250	9	NA	NA	3	0	intron_retention	TRUE	canonical	3	42	junction_7	124.47129002632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGAGTCCTGATCCTG	17415121	True	NA	10	True	AATAAA	-18	NA	17420124	17425331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424930
WTC11_00044064	chr19	+	3711	12	FSM	ENSG00000130304.17	ENST00000252595.12	3514	12	-197	0	-162	0	multi-exon	TRUE	canonical	2	17	junction_10	5.85076105807421	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	17470315	False	NA	22	True	AATAAA	-14	NA	17470326	17506168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17470708_17486562_17486958_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
WTC11_00044065	chr19	+	1021	5	FSM	ENSG00000130313.7	ENST00000252603.7	1008	5	-13	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	22.8076193409132	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17501926	True	NA	9	True	ATTAAA	-17	NA	17511635	17521288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17517709_17517851_17520943
WTC11_00044066	chr19	+	651	4	FSM	ENSG00000130313.7	ENST00000595782.1	651	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.77071889269	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17502155	False	NA	9	True	ATTAAA	-17	NA	17511864	17521288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17520943
WTC11_00044067	chr19	+	558	1	FSM	ENSG00000130313.7	ENST00000596799.1	1601	1	567	476	346	-476	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGCGTCAAGGGACAC	17512200	False	NA	NA	False	NA	NA	NA	17512210	17512768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17512200_17512800
WTC11_00044068	chr19	+	3647	12	FSM	ENSG00000130309.12	ENST00000252599.9	3647	12	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	21.2785539805724	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	17551614	True	NA	32	True	AATAAA	-20	NA	17555648	17583157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17555974_17559310_17559422_17560347_17560466_17567405_17567541_17568508_17568714_17572482_17572603_17577194_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698_17580906_17581176
WTC11_00044069	chr19	+	654	6	ISM	ENSG00000130309.12	ENST00000597147.2	1447	10	12964	0	2580	0	3prime_fragment	FALSE	canonical	2	15	junction_1	84.8631840081434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTGCAAGGCGCCCGCA	17568601	False	NA	NA	False	NA	NA	NA	17568612	17580806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17568714_17577194_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698
WTC11_00044070	chr19	+	676	5	FSM	ENSG00000130309.12	ENST00000597075.1	737	5	61	0	61	0	multi-exon	FALSE	canonical	3	214	junction_1	14.2543852901484	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTGCCCGTCATGTT	17576902	True	NA	NA	False	NA	NA	NA	17577135	17580870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698
WTC11_00044071	chr19	+	2956	2	FSM	ENSG00000130309.12	ENST00000593832.1	2941	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	274	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGGATTTTGCTCGG	17579924	False	NA	37	True	AATAAA	-25	NA	17579935	17583162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17580906_17581176
WTC11_00044073	chr19	+	3310	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	-22	0	-22	0	multi-exon	TRUE	canonical	0	0	junction_6	232.514814342848	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	17708487	True	NA	21	True	AATAAA	-16	NA	17719457	17734513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
WTC11_00044074	chr19	+	717	4	FSM	ENSG00000130479.11	ENST00000598769.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_3	40.0860186210715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTCCTGGAGTACGTGG	17709753	False	NA	NA	False	NA	NA	NA	17720723	17726007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17721038_17724125_17724209_17725048_17725190_17725828
WTC11_00044075	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.4101533959525	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17746521	True	NA	9	True	AATAAA	-33	NA	17747717	17788557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
WTC11_00044076	chr19	+	881	9	FSM	ENSG00000130475.15	ENST00000600209.5	881	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	19.283655644094	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCGCTCAGTGGAAAAATA	17746549	True	NA	NA	False	ACTAAA	-25	NA	17747745	17770827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17754316_17754467_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791
WTC11_00044077	chr19	+	3153	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	61.4943169765155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAAAGGAAAC	17746549	True	NA	-10	True	AATAAA	-14	NA	17747745	17788538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
WTC11_00044078	chr19	+	287	2	FSM	ENSG00000130475.15	ENST00000595749.1	562	2	105	170	99	-170	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGTGGATCAGAGCTT	17753120	False	NA	NA	False	NA	NA	NA	17754316	17754728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17754467_17754591
WTC11_00044083	chr19	+	1748	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15739	-30	1	0	3prime_fragment	FALSE	canonical	3	158	junction_5	11.8081369726741	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	17777418	True	NA	20	True	AATAAA	-44	NA	17778441	17788568	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
WTC11_00044087	chr19	+	1233	4	FSM	ENSG00000105640.13	ENST00000599870.1	1084	4	-210	61	-210	0	multi-exon	TRUE	canonical	3	22177	junction_3	470.876015764471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	17860470	False	NA	-66	True	NA	NA	NA	17860552	17863243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17861473_17862093_17862224_17862917_17863028_17863170
WTC11_00044088	chr19	+	995	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	1129	junction_1	481.378229669768	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	17910287	True	NA	19	True	AATAAA	-27	NA	17933006	17943985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
WTC11_00044089	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	953.586486638732	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	17934965	True	NA	25	True	AATAAA	-33	NA	17935095	17943991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
WTC11_00044090	chr19	+	580	3	FSM	ENSG00000007080.11	ENST00000596123.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGGCAGCGTGGAGG	17936120	False	NA	NA	False	NA	NA	NA	17936250	17943321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17936580_17942655_17942846_17943260
WTC11_00044091	chr19	+	2636	9	NIC	ENSG00000105642.16	novel	3603	10	NA	NA	-12	-965	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	13.0743068649929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTACCACACTGATTCCT	17966628	True	NA	0	True	NA	NA	NA	17967094	17999115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993489_17993560_17998151
WTC11_00044105	chr19	+	1602	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	351	junction_3	19.3697573552174	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	18189106	True	NA	NA	False	NA	NA	NA	18193193	18196948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
WTC11_00044110	chr19	+	1746	18	FSM	ENSG00000130511.16	ENST00000270061.12	1725	18	-21	0	-21	0	multi-exon	TRUE	canonical	3	106	junction_5	79.0131170398932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18417018	True	NA	26	True	AATAAA	-26	NA	18419376	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431352_18431419_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
WTC11_00044113	chr19	+	504	7	FSM	ENSG00000130511.16	ENST00000607020.5	504	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	116.689045472715	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGGGTGACGCCTCCT	18417247	False	NA	NA	False	NA	NA	NA	18419605	18432023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18419708_18427350_18427424_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999
WTC11_00044117	chr19	+	900	9	FSM	ENSG00000130511.16	ENST00000593641.3	900	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_8	89.5684096096386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18432189	False	NA	26	True	AATAAA	-26	NA	18432199	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433933_18434216
WTC11_00044118	chr19	+	811	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	364	junction_2	37.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18433189	True	NA	26	True	AATAAA	-26	NA	18433256	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18433614_18433709_18433818_18434216
WTC11_00044120	chr19	+	1408	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	-64	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	102.558215175577	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18538540	True	NA	37	True	AATAAA	-27	NA	18557805	18569378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
WTC11_00044121	chr19	+	1113	6	FSM	ENSG00000105700.11	ENST00000595073.5	1095	6	-18	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	324.917589551566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATATTTTTGTACCCG	18538604	True	NA	-44	True	NA	NA	NA	18557869	18569297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568680_18568829
WTC11_00044122	chr19	+	2738	5	FSM	ENSG00000105700.11	ENST00000602094.5	2738	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	384.295052661363	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18539846	False	NA	37	True	AATAAA	-27	NA	18559111	18569378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
WTC11_00044125	chr19	+	583	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	-10	-1	-10	0	multi-exon	FALSE	canonical	3	2550	junction_1	1481.99620444858	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18450151	True	NA	40	True	AATAAA	-30	NA	18571791	18575242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044126	chr19	+	951	3	FSM	ENSG00000221983.8	ENST00000599256.5	927	3	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3213	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGGGGTTGGGGTTGCT	18450214	True	NA	NA	False	NA	NA	NA	18571854	18573748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18572608_18573292_18573404_18573661
WTC11_00044127	chr19	+	799	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	-20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2894.67223705897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18450214	True	NA	40	True	AATAAA	-30	NA	18571854	18575242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044128	chr19	+	2769	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	-2	81	0	-81	multi-exon	FALSE	canonical	3	1389	junction_1	1974.99068035776	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGGACTCTTTTTGAAC	18450214	True	NA	23	True	AATAAA	-23	NA	18571854	18577469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044129	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2508.80982738828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18450241	True	NA	32	True	AATAAA	-22	NA	18571881	18575234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044131	chr19	+	708	5	FSM	ENSG00000221983.8	ENST00000599551.5	707	5	0	-1	0	0	multi-exon	FALSE	canonical	3	175	junction_1	2494.64901088309	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18572728	False	NA	40	True	AATAAA	-30	NA	18572739	18575242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18572961_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044132	chr19	+	515	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	-1	0	0	multi-exon	FALSE	canonical	3	5550	junction_3	386.688505130422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18573253	False	NA	40	True	AATAAA	-30	NA	18573264	18575242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00044133	chr19	+	509	3	FSM	ENSG00000221983.8	ENST00000596272.5	508	3	0	-1	0	0	multi-exon	FALSE	canonical	3	5676	junction_2	375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18573036	True	NA	40	True	AATAAA	-30	NA	18573354	18575242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18573404_18573661_18573749_18574869
WTC11_00044134	chr19	+	990	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	-233	10	-120	0	multi-exon	FALSE	canonical	3	378	junction_2	113.789278932595	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	1	True	AATAAA	-7	NA	18588564	18592327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
WTC11_00044135	chr19	+	928	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	-235	9	-124	0	multi-exon	FALSE	canonical	3	136	junction_2	216.607363679077	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	1	True	AATAAA	-7	NA	18588560	18592327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
WTC11_00044136	chr19	+	2499	3	FSM	ENSG00000006015.18	ENST00000600997.5	2275	3	-233	9	-120	0	multi-exon	FALSE	canonical	3	582	junction_2	38	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	1	True	AATAAA	-7	NA	18588564	18592327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589684_18590853
WTC11_00044137	chr19	+	1332	4	FSM	ENSG00000006015.18	ENST00000597371.1	1081	4	-242	-9	-118	0	multi-exon	FALSE	canonical	3	582	junction_2	34.9221356098901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	NA	False	NA	10	True	AATAAA	-16	NA	18588566	18592336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589684_18590853_18590934_18592107
WTC11_00044138	chr19	+	732	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	-241	0	-124	0	multi-exon	FALSE	canonical	3	82	junction_2	270.591122462574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	NA	False	NA	10	True	AATAAA	-16	NA	18588560	18592336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
WTC11_00044139	chr19	+	2465	1	FSM	ENSG00000006015.18	ENST00000595077.1	2465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18589818	False	NA	10	True	AATAAA	-16	NA	18589871	18592336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18589900_18592300
WTC11_00044142	chr19	+	6879	14	FSM	ENSG00000105662.16	ENST00000321949.13	6879	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	15.2610421755535	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCTTCCTCTTTTTTC	18681148	True	NA	16	True	AATAAA	-19	NA	18683679	18782333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18771441_18771547_18774899_18774987_18775640_18775822_18777170
WTC11_00044143	chr19	+	5321	24	FSM	ENSG00000005007.13	ENST00000262803.10	5321	24	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_1	54.7887850210531	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGGTTGGATAAACTG	18823639	True	NA	15	True	AATAAA	-15	NA	18831958	18868230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18832441_18845979_18846120_18847743_18847834_18850074_18850243_18850687_18850869_18852134_18852297_18852986_18853072_18853251_18853351_18854600_18854710_18854878_18855039_18855123_18855243_18855924_18856090_18856185_18856301_18856876_18857021_18857319_18857534_18860320_18860439_18860825_18860983_18862009_18862153_18863437_18863613_18864169_18864252_18865288_18865451_18865560_18865779_18866043_18866167_18866520
WTC11_00044145	chr19	+	561	4	FSM	ENSG00000005007.13	ENST00000601689.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	29.4052149569879	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGATCCAGGGCCCG	18852985	False	NA	NA	False	NA	NA	NA	18852997	18855157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18853072_18853251_18853351_18854600_18854710_18854878
WTC11_00044148	chr19	+	1811	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	-18	0	-8	0	multi-exon	TRUE	canonical	3	157	junction_12	8.86785706294869	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	18917661	True	NA	15	True	AATAAA	-21	NA	18919696	18928630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
WTC11_00044149	chr19	+	1897	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	-18	559	-18	0	multi-exon	TRUE	canonical	3	15	junction_3	56.5605922150394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	18917651	True	NA	15	True	AATAAA	-21	NA	18919686	18928630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
WTC11_00044150	chr19	+	1183	10	NIC	ENSG00000105671.12	novel	1793	13	NA	NA	0	93	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	51.1115942006155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGGCTCACGCCTGTAA	18917702	True	NA	2	True	AATAAA	-17	NA	18919737	18925281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18925129
WTC11_00044151	chr19	+	962	5	FSM	ENSG00000105676.14	ENST00000540792.5	951	5	-11	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	207.799181904068	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTGATGAGGCTGACC	19030223	True	NA	NA	False	NA	NA	NA	19033602	19051902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19042715_19042878_19043991_19044075_19051621
WTC11_00044152	chr19	+	2419	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	-7	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	123.618075423575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	19030223	True	NA	3	True	AATAAA	-4	NA	19033602	19058159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
WTC11_00044153	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	141.477416484045	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	19030223	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
WTC11_00044155	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	50.079121072029	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	19033542	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
WTC11_00044156	chr19	+	3291	8	FSM	ENSG00000181035.14	ENST00000318596.8	3267	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	12	junction_4	6.94879228972303	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGTTTGAATTAATACA	19063812	True	NA	NA	False	AATAAA	-31	NA	19063969	19113030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19064116_19096090_19096206_19101780_19101887_19104912_19104939_19105560_19105728_19106268_19106386_19107893_19108046_19110568
WTC11_00044158	chr19	+	747	3	FSM	ENSG00000181035.14	ENST00000596819.1	753	3	6	0	6	0	multi-exon	FALSE	canonical	3	29	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTACCCGCTGGATGTG	19105738	False	NA	NA	False	NA	NA	NA	19105868	19110646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19106386_19107893_19108046_19110568
WTC11_00044163	chr19	+	832	6	FSM	ENSG00000064490.14	ENST00000540981.5	832	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	133.466699966696	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGGGAGTCGGGAGT	19192686	False	NA	NA	False	NA	NA	NA	19192840	19198722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197520_19197622_19198106_19198233_19198656
WTC11_00044164	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	116.70580490258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19189515	True	NA	6	True	AATAAA	-15	NA	19192910	19201866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
WTC11_00044165	chr19	+	1191	9	NIC	ENSG00000064490.14	novel	1212	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	43.5423644282209	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGGGACTTTGCTGTG	19192687	False	NA	3	True	AATAAA	-12	NA	19192841	19201863	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
WTC11_00044167	chr19	+	2356	5	FSM	ENSG00000130287.14	ENST00000590187.2	2361	5	0	5	0	-5	multi-exon	FALSE	canonical	3	21	junction_1	5.22015325445528	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAACAGATCCTATGTG	19226816	False	NA	14	True	AGTAAA	-27	NA	19226842	19238787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
WTC11_00044168	chr19	+	3848	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_13	38.9455539547136	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTACTCGAGCTTTA	19315677	True	NA	10	True	ATTAAA	-20	NA	19320828	19357760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
WTC11_00044169	chr19	+	4853	19	FSM	ENSG00000129933.21	ENST00000262815.13	4845	19	-8	0	-8	0	multi-exon	FALSE	canonical	3	129	junction_13	25.2826002725829	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	19315669	True	NA	17	True	AGTAAA	-18	NA	19320820	19358754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347367_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
WTC11_00044170	chr19	+	4745	17	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	60.0488082729374	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	19315690	True	NA	17	True	AGTAAA	-18	NA	19320841	19358754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19321136_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
WTC11_00044174	chr19	+	1111	7	FSM	ENSG00000129933.21	ENST00000587638.6	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	33.1947117608948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCTGATTGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	19346876	19355869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19347367_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
WTC11_00044175	chr19	+	3751	6	FSM	ENSG00000129933.21	ENST00000587709.5	3751	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	23.4861661409435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTACTCGAGCTTTA	NA	False	NA	10	True	ATTAAA	-20	NA	19347649	19357760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
WTC11_00044178	chr19	+	3728	2	FSM	ENSG00000129933.21	ENST00000589637.1	555	2	-432	-2741	-432	0	multi-exon	FALSE	canonical	3	217	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	NA	False	NA	17	True	AGTAAA	-18	NA	19354710	19358754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19355392_19355707
WTC11_00044179	chr19	+	638	3	FSM	ENSG00000167491.18	ENST00000494516.6	640	3	2	0	2	0	multi-exon	FALSE	canonical	2	6	junction_1	23.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGATGGGCCCGTGGAC	19384547	True	NA	NA	False	NA	NA	NA	19385827	19465577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19386139_19436130_19436220_19465339
WTC11_00044180	chr19	+	5676	12	FSM	ENSG00000167491.18	ENST00000360315.7	5671	12	-5	0	2	0	multi-exon	TRUE	canonical	3	42	junction_8	232.481119823482	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTTGTCCCTTCT	19384547	True	NA	17	True	AATAAA	-20	NA	19385827	19508931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501120_19501417_19501968_19502044_19502330_19502527_19505343
WTC11_00044181	chr19	+	3529	12	NIC	ENSG00000167491.18	novel	5671	12	NA	NA	0	-365	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	168.318961282657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCCTGTCGTGTGAA	19385885	False	NA	3	True	AATAAA	-15	NA	19386022	19506976	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
WTC11_00044182	chr19	+	5714	12	FSM	ENSG00000167491.18	ENST00000683918.1	5714	12	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	93.1054676115939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTGTCCCTTCTG	19393661	True	NA	18	True	AATAAA	-21	NA	19405674	19508932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19406020_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
WTC11_00044183	chr19	+	3738	12	NIC	ENSG00000167491.18	novel	5714	12	NA	NA	15	-365	combination_of_known_splicesites	FALSE	canonical	3	131	junction_1	156.812463663864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCCTGTCGTGTGAA	19393676	True	NA	3	True	AATAAA	-15	NA	19405689	19506976	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19406020_19465344_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
WTC11_00044185	chr19	+	413	2	FSM	ENSG00000186010.19	ENST00000511584.2	640	2	-5	232	0	-232	multi-exon	FALSE	canonical	3	9675	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGCATTGCTTGAGCC	19476256	True	NA	NA	False	NA	NA	NA	19516224	19526486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181
WTC11_00044186	chr19	+	581	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	-5	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	135.534333493604	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	19476256	True	NA	NA	False	NA	NA	NA	19516224	19528022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
WTC11_00044187	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	208.03665542399	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	19476256	True	NA	27	True	AATAAA	-17	NA	19516224	19528198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
WTC11_00044188	chr19	+	1102	7	FSM	ENSG00000258674.5	ENST00000555938.1	1100	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	99	junction_6	4672.87661819664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGATGTCCCCTGGC	19476256	True	NA	NA	False	NA	NA	NA	19516224	19536076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19535033_19535145_19535336_19535451_19535528
WTC11_00044190	chr19	+	2806	6	FSM	ENSG00000250067.12	ENST00000458210.7	2785	6	-21	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	39.7562573691237	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCGCCTCGCCTCCGCC	19528842	False	NA	1	True	AATAAA	-14	NA	19528860	19537578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19528992_19532631_19532741_19533103_19535145_19535336_19535451_19535528_19535680_19537318
WTC11_00044192	chr19	+	3470	6	NNC	ENSG00000250067.12	novel	878	6	NA	NA	2808	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_1	34.0176424815124	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCGCCTCGCCTCCGCC	19531635	False	NA	1	True	AATAAA	-14	NA	19531718	19537578	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_19532514_19532631_19532741_19533103_19535145_19535336_19535451_19535528_19535680_19537318
WTC11_00044193	chr19	+	4196	8	FSM	ENSG00000160161.9	ENST00000291495.5	4199	8	0	3	0	-3	multi-exon	FALSE	canonical	3	30	junction_3	10.4861424591443	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCATGGTGTCAGGCTC	19537588	True	NA	32	True	ATTAAA	-14	NA	19538264	19546656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19538414_19539678_19539778_19540203_19540477_19541090_19541247_19542374_19542651_19542863_19542973_19543247_19543406_19543680
WTC11_00044195	chr19	+	1043	1	ISM	ENSG00000181896.12	ENST00000592502.2	4642	4	13619	6	1164	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGAAGTTCCCTTCTG	19682444	False	NA	25	True	AATAAA	-14	NA	19682457	19683500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_19682500_19683500
WTC11_00044203	chr19	+	2781	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	-18	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	24.4994331000173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	19893152	True	NA	NA	False	AATAAA	-20	NA	19900927	19935575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
WTC11_00044206	chr19	+	1668	2	NIC	ENSG00000184635.16	novel	868	3	NA	NA	0	963	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATCAGCCCACTCTC	19893207	True	NA	7	True	AATAAA	-21	NA	19900982	19910483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19901092_19908924
WTC11_00044210	chr19	+	1748	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	55	junction_1	79.5165950534157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	20068751	True	NA	-10	True	NA	NA	NA	20077969	20127076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
WTC11_00044211	chr19	+	3750	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	-6	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	93.4273336163816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	20068775	True	NA	6	True	AATAAA	-19	NA	20077993	20121165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
WTC11_00044212	chr19	+	626	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_3	124.046586230962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068781	True	NA	5	True	TATAAA	-5	NA	20077999	20127018	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
WTC11_00044213	chr19	+	1786	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	70.5739860005087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGTAAAAGCCTTCAT	20068779	True	NA	4	True	TATAAA	-4	NA	20077997	20127017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_20078136_20105220_20105317_20121221_20121347_20125005_20126167_20126751
WTC11_00044214	chr19	+	4367	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	0	341	combination_of_known_junctions	FALSE	canonical	3	122	junction_3	92.8099536687741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCATCATGACTATCAAAA	20068818	True	NA	-47	True	NA	NA	NA	20078036	20125484	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780_20121347_20125005
WTC11_00044222	chr19	+	1531	4	FSM	ENSG00000105750.15	ENST00000300540.7	1531	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	30.4010233745876	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTTATTTGACTCTA	20921624	True	NA	NA	False	AATAAA	-21	NA	20923275	20943977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20942800
WTC11_00044233	chr19	+	8084	5	NNC	ENSG00000196705.8	novel	13894	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	35	junction_4	16.9779268463496	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCACATTGTCTTTAT	21136663	True	NA	10	True	AATAAA	-19	NA	21142025	21190226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21182622
WTC11_00044234	chr19	+	4523	7	NIC	ENSG00000196705.8	novel	1971	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	21.8384217988999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCACATTGTCTTTAT	21136666	True	NA	10	True	AATAAA	-19	NA	21142028	21190226	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622_21186288_21189864
WTC11_00044235	chr19	+	13910	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	-16	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	16.3171688720807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	21136661	True	NA	NA	False	TATAAA	-16	NA	21142023	21196053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
WTC11_00044236	chr19	+	545	1	FSM	ENSG00000268322.1	ENST00000596023.1	559	1	-87	101	-87	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAAGGTTTCTCTTCC	NA	False	NA	NA	False	AAAAAG	-17	NA	21318073	21318618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21318100_21318600
WTC11_00044237	chr19	+	2425	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	17	0	17	0	multi-exon	FALSE	canonical	3	104	junction_4	51.5333629797241	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	21350247	True	NA	6	True	ATTAAA	-10	NA	21358946	21379300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
WTC11_00044238	chr19	+	6230	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	-53	0	17	0	multi-exon	FALSE	canonical	3	23	junction_4	86.1365195489114	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	21350247	True	NA	10	True	AATAAA	-25	NA	21358946	21388582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
WTC11_00044239	chr19	+	1166	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	63	junction_4	68.9891295785068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	21350268	True	NA	8	True	ATTAAA	-12	NA	21358967	21379302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
WTC11_00044240	chr19	+	526	5	NNC	ENSG00000172687.14	novel	2442	5	NA	NA	1	379	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	93.8735852090459	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTGTGTTTTTTAAA	21350312	True	NA	3	True	AATAAA	-17	NA	21359011	21379681	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21379603
WTC11_00044241	chr19	+	3768	4	ISM	ENSG00000172687.14	ENST00000380870.8	1142	5	44	-6	6	6	intron_retention	FALSE	canonical	3	210	junction_1	12.5521135891752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACCTGTCCCAGTCTT	21350336	True	NA	14	True	ATTAAA	-18	NA	21359035	21379308	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868
WTC11_00044244	chr19	+	616	2	FSM	ENSG00000196268.12	ENST00000598152.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGCATTAAAGATTCTT	21403375	False	NA	NA	False	NA	NA	NA	21405277	21422949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21405857_21422912
WTC11_00044249	chr19	+	1336	2	NIC	ENSG00000197013.11	novel	681	3	NA	NA	-11	738	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTTTCCAGTCTCCTA	21504689	True	NA	18	True	AATAAA	-19	NA	21505590	21519726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21505775_21518574
WTC11_00044250	chr19	+	4796	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	47	junction_1	11.5181016954473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	21504689	True	NA	6	True	AATAAA	-20	NA	21505590	21540668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
WTC11_00044255	chr19	+	4099	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	0	-3536	0	3536	multi-exon	TRUE	canonical	3	35	junction_1	9	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTTAATTATTTTTA	23071099	True	NA	NA	False	NA	NA	NA	23075210	23103897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23075388_23098339_23098414_23100049
WTC11_00044256	chr19	+	4576	6	NNC	ENSG00000267886.1	novel	581	4	NA	NA	0	3536	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	9.06421535489973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTTAATTATTTTTA	23071099	True	NA	NA	False	NA	NA	NA	23075210	23103897	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543_23095700_23098339_23098414_23100049
WTC11_00044261	chr19	+	1434	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	-27	733	-2	-733	multi-exon	FALSE	canonical	3	49	junction_3	109.958578059599	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATAATTATGAGTC	23752633	True	NA	6	True	AATAAA	-32	NA	23762976	23828135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
WTC11_00044262	chr19	+	1047	3	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	-5	19353	4	0	5prime_fragment	FALSE	canonical	3	264	junction_2	16.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	23752655	True	NA	8	True	AATAAA	-16	NA	23762998	23809515	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_23763135_23807825_23807940_23808718
WTC11_00044265	chr19	+	4317	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	0	-3498	0	3488	multi-exon	FALSE	canonical	3	6	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTGCTATACTTTCT	24028688	True	NA	11	True	AATAAA	-19	NA	24033452	24040893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24036745
WTC11_00044266	chr19	+	4416	3	FSM	ENSG00000268362.6	ENST00000656966.1	928	3	0	-3488	0	3488	multi-exon	FALSE	canonical	2	2	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTGCTATACTTTCT	24028719	True	NA	11	True	AATAAA	-19	NA	24033483	24040893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24036252_24036383_24036745
WTC11_00044271	chr19	+	4297	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	-29	-179	-2	179	multi-exon	FALSE	canonical	3	58	junction_1	44.4996878890428	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTGCTTATGATTC	24084331	True	NA	NA	False	NA	NA	NA	24087157	24130147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
WTC11_00044272	chr19	+	3167	1	FSM	ENSG00000213096.11	ENST00000593783.1	3167	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCTCTCTAATTTT	NA	False	NA	15	True	AATAAA	-16	NA	24104185	24107352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24104200_24107400
WTC11_00044277	chr19	+	3070	1	FSM	ENSG00000281468.1	ENST00000621046.2	635	1	-2446	11	-2446	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATAGAAGTCTTATTG	27800235	False	NA	-3	True	AATAAA	-45	NA	27800391	27803461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27800400_27803500
WTC11_00044279	chr19	+	598	1	FSM	ENSG00000276251.1	ENST00000618791.1	803	1	-155	360	-155	-360	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTCACATCCTAACCTCA	29220684	False	NA	NA	False	NA	NA	NA	29220708	29221306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29220700_29221300
WTC11_00044286	chr19	+	1739	2	FSM	ENSG00000166289.6	ENST00000436066.4	1699	2	-40	0	-38	0	multi-exon	FALSE	canonical	3	104	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	29663283	True	NA	29	True	AATAAA	-36	NA	29665420	29675477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29665506_29673823
WTC11_00044287	chr19	+	2062	2	FSM	ENSG00000166289.6	ENST00000592810.1	1357	2	-67	-638	-67	4	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTCCTTGCTTCAGAC	NA	False	NA	33	True	AATAAA	-40	NA	29665391	29675481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29665796_29673823
WTC11_00044288	chr19	+	2044	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-237	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	90.9013201224273	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAGTTGACAGTGT	29811708	False	NA	-80	True	GGGGCT	-10	NA	29811753	29824212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
WTC11_00044291	chr19	+	1812	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	100.746414328253	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	29809440	True	NA	16	True	AATAAA	-18	NA	29811993	29824308	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
WTC11_00044294	chr19	+	2517	10	FSM	ENSG00000105176.18	ENST00000574110.5	2495	10	-22	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	107.284668056531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	29935628	True	NA	32	True	AGTAAA	-22	NA	29942238	30015704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29942665_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
WTC11_00044297	chr19	+	3837	3	FSM	ENSG00000105176.18	ENST00000575242.1	1032	3	0	-2805	0	0	multi-exon	FALSE	canonical	3	489	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	30009036	False	NA	32	True	AGTAAA	-22	NA	30009079	30015704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_30009354_30011093_30011237_30012284
WTC11_00044300	chr19	+	4128	1	FSM	ENSG00000278875.1	ENST00000625085.1	1802	1	-96	-2230	-96	2230	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGTGAGTGTTTATGT	NA	False	NA	NA	False	AATAGA	-28	NA	31364200	31368328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_31364200_31368300
WTC11_00044301	chr19	+	5575	4	FSM	ENSG00000168813.17	ENST00000587084.5	5560	4	-15	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	12.0277457017791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGCGGCCGCTTTT	32342016	True	NA	NA	False	NA	NA	NA	32345609	32359793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615
WTC11_00044303	chr19	+	7796	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	-1	-157	-1	157	multi-exon	TRUE	canonical	3	12	junction_1	31.582273509043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACACAGCCATGCTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	32345592	32387824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
WTC11_00044305	chr19	+	6427	19	FSM	ENSG00000178904.19	ENST00000342179.9	6015	19	-414	2	-38	0	multi-exon	FALSE	canonical	3	21	junction_1	15.042429702612	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGAGTGTCTTGC	NA	False	NA	NA	False	AGTAAA	-14	NA	32405710	32485887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32406303_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32468730_32468814_32477521_32477655_32480398_32480558_32482078
WTC11_00044310	chr19	+	570	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	-12	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	926.273091480045	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	32551444	True	NA	14	True	AATAAA	-20	NA	32581189	32587425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
WTC11_00044311	chr19	+	603	6	FSM	ENSG00000105185.12	ENST00000590247.7	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	2119	junction_1	107.009158486552	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGGCCAGATCTGTG	32551444	True	NA	42	True	AATAAA	-30	NA	32581189	32587453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
WTC11_00044312	chr19	+	737	6	FSM	ENSG00000105185.12	ENST00000586035.1	601	6	-102	-34	-102	-4	multi-exon	FALSE	canonical	2	17	junction_1	932.057208544626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCCAAGTGGCCAGAT	32551678	False	NA	37	True	AATAAA	-43	NA	32581423	32587448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32581701_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
WTC11_00044315	chr19	+	301	1	FSM	ENSG00000186326.4	ENST00000334176.4	2453	1	646	1506	646	-1506	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCAGGCGGCGGGCGCCGA	32676479	False	NA	NA	False	NA	NA	NA	32676493	32676794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32676500_32676800
WTC11_00044319	chr19	+	3089	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	-16	-760	5	760	multi-exon	FALSE	canonical	3	38	junction_1	4.76313972081441	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAAATCAGCCAGGCA	32971648	True	NA	NA	False	ACTAAA	-2	NA	32972225	32978989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
WTC11_00044328	chr19	+	683	3	FSM	ENSG00000124302.13	ENST00000604556.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTCCTTCTCAGCCAG	33619405	True	NA	NA	False	NA	NA	NA	33621983	33744484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33622297_33689175_33689392_33744330
WTC11_00044329	chr19	+	781	4	NNC	ENSG00000124302.13	novel	2225	5	NA	NA	23	8231	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	4.49691252107735	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATATTTTATCGTTTAA	33619428	True	NA	5	True	ATTAAA	-18	NA	33622006	33752715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_33622297_33667766_33667844_33689175_33689392_33752517
WTC11_00044330	chr19	+	4080	8	NNC	ENSG00000153885.15	novel	2555	6	NA	NA	28	0	intron_retention	FALSE	canonical	1	1	junction_7	28.8734041877253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33796362	False	NA	72	True	AATAAA	-22	NA	33796481	33815761	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_33796526_33798670_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33811790_33812039_33812789
WTC11_00044331	chr19	+	3935	7	FSM	ENSG00000153885.15	ENST00000589786.5	1625	7	-21	-2289	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	22.2336081942031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33796508	True	NA	72	True	AATAAA	-22	NA	33796840	33815761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33796988_33798670_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
WTC11_00044332	chr19	+	4937	7	FSM	ENSG00000153885.15	ENST00000284006.10	4918	7	-21	2	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	27.92499875659	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33796508	True	NA	72	True	AATAAA	-22	NA	33796840	33815761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33796988_33798667_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33811790
WTC11_00044335	chr19	+	4433	6	FSM	ENSG00000153885.15	ENST00000430256.3	2555	6	-360	-1518	-311	0	multi-exon	FALSE	canonical	3	46	junction_5	6.34350061086148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33797876	True	NA	72	True	AATAAA	-22	NA	33798025	33815761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
WTC11_00044337	chr19	+	3843	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	-421	9	-421	0	multi-exon	TRUE	canonical	3	730	junction_9	113.516301108184	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAATGCTCGTCAAA	NA	False	NA	14	True	AATAAA	-8	NA	34172082	34229279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
WTC11_00044338	chr19	+	3380	10	NIC	ENSG00000257103.9	novel	3424	11	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	362.565583679885	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172434	34229288	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
WTC11_00044340	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_10	257.744078496481	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
WTC11_00044344	chr19	+	4269	19	FSM	ENSG00000105220.17	ENST00000415930.8	4341	19	72	0	19	0	multi-exon	TRUE	canonical	3	72	junction_1	395.456311676074	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	NA	False	NA	28	True	AATAAA	-20	NA	34364811	34402413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
WTC11_00044345	chr19	+	476	3	FSM	ENSG00000105220.17	ENST00000646312.1	479	3	3	0	3	0	multi-exon	FALSE	canonical	3	1568	junction_1	41	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGGAGCGGATGTTCAAT	34363691	True	NA	NA	False	NA	NA	NA	34365028	34366807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34365389_34366344_34366436_34366782
WTC11_00044348	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_10	169.402675409765	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	34363858	False	NA	28	True	AATAAA	-20	NA	34365195	34402413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
WTC11_00044353	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	28.0670625466934	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	34400688	True	NA	-8	True	ATTAAA	-2	NA	34404424	34426150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
WTC11_00044356	chr19	+	2737	18	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	84	junction_1	249.044888326149	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATGCCTGCACAGTTC	34402917	True	NA	27	True	AATAAA	-19	NA	34428380	34469889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
WTC11_00044357	chr19	+	4027	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	-22	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	87.2288656351784	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	34402895	True	NA	26	True	ACTAAA	-19	NA	34428358	34471251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
WTC11_00044361	chr19	+	590	5	FSM	ENSG00000089335.22	ENST00000502743.5	578	5	-12	0	-4	0	multi-exon	FALSE	canonical	3	17	junction_1	108.030088401334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACTGTAGAAGC	34677621	False	NA	NA	False	NA	NA	NA	34677634	34684137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34677797_34678736_34678814_34682776_34682898_34683154_34683239_34683991
WTC11_00044373	chr19	+	5771	4	FSM	ENSG00000197841.15	ENST00000492450.3	5792	4	0	21	0	-21	multi-exon	FALSE	canonical	3	34	junction_2	23.6126143312331	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGCTATCTCACAGC	34733023	True	NA	NA	False	NA	NA	NA	34734242	34745357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34735047_34739147_34739269_34739522_34739622_34740610
WTC11_00044375	chr19	+	2582	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_4	10.1334840997556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	34926412	True	NA	1	True	AATAAA	-16	NA	34926899	34945164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
WTC11_00044377	chr19	+	1554	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	-746	0	323	0	multi-exon	FALSE	canonical	3	1675	junction_1	131.298134030915	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	34999697	False	NA	28	True	AGTAAA	-25	NA	34999709	35010639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
WTC11_00044378	chr19	+	2647	19	FSM	ENSG00000089351.15	ENST00000680623.1	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	1343	junction_7	166.987958832551	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	34983599	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
WTC11_00044380	chr19	+	2659	20	FSM	ENSG00000089351.15	ENST00000317991.10	2659	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	530.083038495697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	34983599	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35022899_35022912_35023235_35023344_35023426_35023548_35026048
WTC11_00044386	chr19	+	2277	9	FSM	ENSG00000089351.15	ENST00000598118.1	2277	9	0	0	0	0	multi-exon	FALSE	canonical	3	1531	junction_4	85.5639380814137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	35014951	False	NA	13	True	AATAAA	-13	NA	35014968	35026469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
WTC11_00044394	chr19	+	1035	1	FSM	ENSG00000179066.8	ENST00000313865.6	1269	1	-27	261	-27	-261	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGTTTTGGTTACAG	NA	False	NA	NA	False	NA	NA	NA	35105941	35106976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35105900_35107000
WTC11_00044395	chr19	+	264	6	FSM	ENSG00000089356.19	ENST00000605550.5	590	6	0	326	0	-326	multi-exon	FALSE	canonical	2	3	junction_3	0.748331477354788	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATACTGTTCCGGCAT	35116303	True	NA	NA	False	NA	NA	NA	35116318	35122954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35116360_35119362_35119417_35121077_35121111_35121221_35121246_35122764_35122840_35122917
WTC11_00044408	chr19	+	2480	9	FSM	ENSG00000105699.17	ENST00000602122.5	2480	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	376.290259473986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	35248338	True	NA	12	True	AATAAA	-13	NA	35248391	35267962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266838_35266968_35267108_35267735_35267823
WTC11_00044409	chr19	+	2274	10	FSM	ENSG00000105699.17	ENST00000621372.4	2274	10	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	400.346516574496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	35248602	False	NA	10	True	AATAAA	-11	NA	35248655	35267960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35261924_35261982_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
WTC11_00044411	chr19	+	2112	9	FSM	ENSG00000105699.17	ENST00000354900.7	2105	9	-7	0	0	0	multi-exon	FALSE	canonical	3	827	junction_3	195.689645868145	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	35246797	True	NA	14	True	AATAAA	-15	NA	35248764	35267964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
WTC11_00044412	chr19	+	1606	7	FSM	ENSG00000105699.17	ENST00000427250.5	1606	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	489.35243491328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	35236954	True	NA	12	True	AATAAA	-13	NA	35249001	35267962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
WTC11_00044415	chr19	+	1539	9	FSM	ENSG00000105698.16	ENST00000343550.9	1523	9	-16	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	42.0251041045706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGCTTGTGTGTTTG	35268851	False	NA	39	True	AATAAA	-22	NA	35268961	35279815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
WTC11_00044416	chr19	+	1746	10	FSM	ENSG00000105698.16	ENST00000222305.8	1746	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	38.3235092081178	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTGTTTGTCCATC	35268851	False	NA	45	True	AATAAA	-28	NA	35268961	35279821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35269802_35270004_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
WTC11_00044420	chr19	+	2742	2	FSM	ENSG00000105698.16	ENST00000594264.1	2742	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTTGTCTGCTTGTGT	35276965	False	NA	34	True	AATAAA	-17	NA	35276976	35279810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35279075_35279166
WTC11_00044424	chr19	+	562	2	FSM	ENSG00000105677.12	ENST00000596232.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGACTCAGATGCCCTGT	35534746	True	NA	99	True	NA	NA	NA	35545651	35546284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35545817_35545887
WTC11_00044426	chr19	+	1067	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	-22	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	48.411646326065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534746	True	NA	37	True	AGTAAA	-17	NA	35545651	35547526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
WTC11_00044435	chr19	+	1564	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	45	0	0	multi-exon	FALSE	canonical	3	26	junction_4	258.271629055535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	35614581	True	NA	-28	True	NA	NA	NA	35629029	35637641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
WTC11_00044437	chr19	+	1693	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	374	junction_5	161.706028045255	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	35614586	True	NA	16	True	AATAAA	-17	NA	35629034	35637685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
WTC11_00044439	chr19	+	1572	9	NIC	ENSG00000126254.12	novel	1487	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	303	junction_4	167.428902821466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	35614619	True	NA	15	True	AATAAA	-16	NA	35629067	35637684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
WTC11_00044444	chr19	+	513	5	NNC	ENSG00000126267.11	novel	488	4	NA	NA	0	53274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2905.1723701013	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTATGGGGAAGCCGACT	35577077	True	NA	NA	False	AAAAAG	-4	NA	35648322	35712056	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593_35658776_35712024
WTC11_00044448	chr19	+	1119	4	FSM	ENSG00000272333.8	ENST00000586308.1	705	4	18	-432	18	48	multi-exon	FALSE	canonical	3	92	junction_1	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACACCCACCCATCATG	35737461	False	NA	67	True	NA	NA	NA	35737485	35738928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35737744_35737858_35737943_35738061_35738192_35738281
WTC11_00044450	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	150.169533823905	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	35741946	True	NA	22	True	AATAAA	-26	NA	35745650	35747519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
WTC11_00044451	chr19	+	952	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	-17	0	-8	0	multi-exon	FALSE	canonical	3	30	junction_5	7.70957197255464	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35748222	True	NA	4	True	AGTAAA	-18	NA	35748558	35754519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
WTC11_00044453	chr19	+	638	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	134	0	-2	multi-exon	FALSE	canonical	3	12	junction_4	11.409973707244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCAGTGGCTCACACC	35755903	True	NA	NA	False	NA	NA	NA	35758193	35762429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
WTC11_00044458	chr19	+	4219	21	FSM	ENSG00000004777.19	ENST00000378944.9	4219	21	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	17.5222002043122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35775058	True	NA	20	True	AATAAA	-15	NA	35775514	35788822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35775665_35777823_35777909_35778279_35778361_35778463_35778602_35779031_35779125_35780210_35780334_35780420_35780499_35780581_35780649_35780756_35780817_35780919_35781073_35781149_35781253_35782372_35782518_35782596_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167_35787560_35787643
WTC11_00044463	chr19	+	2999	8	ISM	ENSG00000004777.19	ENST00000588248.6	2004	10	252	-23	0	0	intron_retention	FALSE	canonical	2	10	junction_2	20.232324107119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35782587	False	NA	20	True	AATAAA	-15	NA	35782624	35788822	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167
WTC11_00044467	chr19	+	3402	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	-422	0	-98	0	multi-exon	FALSE	canonical	3	22	junction_9	6.37757551015706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35856297	False	NA	11	True	AATAAA	-19	NA	35856488	35867136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
WTC11_00044468	chr19	+	2417	17	FSM	ENSG00000105290.13	ENST00000221891.9	2370	17	-50	3	-39	0	multi-exon	FALSE	canonical	3	33	junction_12	34.2558731278302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCAGTCTGAGTCTCT	35868234	True	NA	3	True	AATAAA	-14	NA	35868523	35879789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878081_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
WTC11_00044469	chr19	+	2503	17	FSM	ENSG00000105290.13	ENST00000652533.1	2342	17	-199	38	-166	0	multi-exon	FALSE	canonical	3	75	junction_1	27.183907808665	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCCTACTAACATCCCA	35868323	False	NA	-35	True	NA	NA	NA	35868396	35879751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
WTC11_00044471	chr19	+	664	8	FSM	ENSG00000105290.13	ENST00000588808.5	664	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	47.910205124817	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGAAGCCCTACGGGG	35873614	False	NA	NA	False	NA	NA	NA	35873645	35879174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35873714_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073
WTC11_00044473	chr19	+	454	4	FSM	ENSG00000126264.10	ENST00000246551.9	564	4	4	106	4	1	multi-exon	FALSE	canonical	3	10	junction_1	2.35702260395516	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCGTATTCTTTCTCA	35902443	True	NA	11	True	AATAAA	-15	NA	35902532	35904271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904119
WTC11_00044477	chr19	+	5247	32	Fusion	ENSG00000075702.19_ENSG00000267698.2	novel	3298	15	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_12	100.056591687217	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCTGGTGTCTGT	36013950	True	NA	9	True	AATAAA	-15	NA	36014548	36105105	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_36014587_36016811_36016961_36019233_36019385_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067173_36068011_36071555_36071717_36073356_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00044478	chr19	+	2798	19	FSM	ENSG00000075702.19	ENST00000680489.1	2987	19	189	0	-43	0	multi-exon	FALSE	canonical	0	0	junction_11	55.7645236576574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTATTAAAGTGGAAAAG	36054787	False	NA	NA	False	NA	NA	NA	36054837	36093142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688
WTC11_00044480	chr19	+	1672	10	FSM	ENSG00000075702.19	ENST00000681542.1	1672	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	73.3178434819213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAGTTTATCAATTA	36048504	True	NA	7	True	AATAAA	-15	NA	36054896	36075418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36075054
WTC11_00044485	chr19	+	4740	32	FSM	ENSG00000075702.19	ENST00000401500.7	4727	32	-8	-5	8	5	multi-exon	FALSE	canonical	0	0	junction_11	50.8420663702722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCTGTTTGGGCCT	36048496	True	NA	17	True	AATAAA	-23	NA	36054888	36105113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00044488	chr19	+	4643	32	FSM	ENSG00000075702.19	ENST00000270301.12	4634	32	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	56.9334277249122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCTGGTGTCTGT	36048570	True	NA	9	True	AATAAA	-15	NA	36054962	36105105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00044489	chr19	+	5973	30	FSM	ENSG00000075702.19	ENST00000587391.6	5973	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	77.3610679830418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	36048570	True	NA	12	True	AATAAA	-18	NA	36054962	36105108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36081793_36081936_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00044511	chr19	+	1428	11	FSM	ENSG00000126247.11	ENST00000246533.8	1428	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	149.809746011399	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36131215	True	NA	24	True	AATAAA	-24	NA	36140065	36150353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36140158_36140996_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
WTC11_00044512	chr19	+	1421	11	NIC	ENSG00000126247.11	novel	1428	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	186.160146110815	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGGATCTGCCTCCTG	36131215	True	NA	20	True	AATAAA	-20	NA	36140065	36150349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36140158_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
WTC11_00044517	chr19	+	558	4	FSM	ENSG00000233527.10	ENST00000592880.6	452	4	-106	0	54	0	multi-exon	FALSE	canonical	2	6	junction_3	8.28653526310404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36572565	True	NA	6	True	ATTAAA	-20	NA	36573430	36594708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36573556_36574820_36574901_36593845_36593932_36594441
WTC11_00044523	chr19	+	2694	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	33	junction_1	26.7374061735406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36688611	True	NA	15	True	AATAAA	-17	NA	36689396	36721326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
WTC11_00044525	chr19	+	2048	2	FSM	ENSG00000267260.3	ENST00000663625.1	2062	2	14	0	-4	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAGAAAAAATTAAATA	36772102	True	NA	-34	True	NA	NA	NA	36773138	36777033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36773539_36775385
WTC11_00044526	chr19	+	1871	2	FSM	ENSG00000267260.3	ENST00000665759.2	1891	2	0	20	0	-20	multi-exon	FALSE	canonical	3	112	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATACCCAGCACCTGAA	36773076	False	NA	-9	True	AATAAA	-4	NA	36773111	36777058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36773310_36775385
WTC11_00044531	chr19	+	342	3	ISM	ENSG00000251247.12	ENST00000432005.6	585	4	-24	20008	11	-9	5prime_fragment	FALSE	canonical	2	6	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTCACATGCACAGAGTA	36850092	True	NA	NA	False	CATAAA	-4	NA	36850905	36893021	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_36850969_36851829_36851905_36892817
WTC11_00044533	chr19	+	2237	10	FSM	ENSG00000198453.14	ENST00000444991.5	2232	10	-5	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_6	10.7611555669362	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTGGGGAGAGACC	36915912	True	NA	NA	False	NA	NA	NA	36916358	36997440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36974419_36974467_36991175_36991300_36991750_36991847_36996316
WTC11_00044540	chr19	+	2192	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	-12	-1516	3	1516	multi-exon	FALSE	canonical	3	34	junction_4	49.3425526295509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTTTCTTTGATACA	37313770	True	NA	-13	True	AATACA	-5	NA	37317906	37326563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
WTC11_00044541	chr19	+	1552	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	7	-601	3	601	multi-exon	FALSE	canonical	2	7	junction_4	60.8995073871702	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATATTATGTTTCCTC	37313770	True	NA	NA	False	ATTAAA	-17	NA	37317906	37329706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
WTC11_00044543	chr19	+	537	5	FSM	ENSG00000181666.19	ENST00000589188.5	527	5	-10	0	3	0	multi-exon	FALSE	canonical	3	28	junction_1	54.7237379936714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGCGAGGGGAAGCGC	37313770	True	NA	NA	False	NA	NA	NA	37317906	37347810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37323532_37323571_37324207_37324266_37347189_37347317_37347776
WTC11_00044544	chr19	+	3011	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	35.4906090865363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	37313745	True	NA	21	True	AATAAA	-22	NA	37317881	37364447	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
WTC11_00044548	chr19	+	2788	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	44	junction_2	41.0327613011847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATTGTCAGTGTATCC	37333591	True	NA	23	True	AATAAA	-24	NA	37334647	37364449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
WTC11_00044555	chr19	+	302	4	FSM	ENSG00000189164.15	ENST00000589615.1	573	4	120	151	0	-151	multi-exon	FALSE	canonical	1	1	junction_3	8.33999733546454	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCCGCCTCCTGGATTC	37370675	True	NA	NA	False	NA	NA	NA	37371180	37379541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37379486
WTC11_00044556	chr19	+	4967	5	FSM	ENSG00000189164.15	ENST00000436120.7	5186	5	82	137	0	35	multi-exon	FALSE	canonical	3	17	junction_2	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCTTAGGATTAGTGA	37370675	True	NA	NA	False	NA	NA	NA	37371180	37392929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37388305
WTC11_00044557	chr19	+	7108	8	FSM	ENSG00000188227.14	ENST00000627814.3	7117	8	9	0	9	0	multi-exon	FALSE	canonical	3	10	junction_1	12.4883619291511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTTGAAAATGTTTC	37506569	True	NA	NA	False	AATAAA	-24	NA	37506947	37543333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37506967_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307_37533404_37536896
WTC11_00044559	chr19	+	1767	8	NNC	ENSG00000188227.14	novel	3869	7	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	11.4606692115038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCTTACGTTTACATG	37506748	True	NA	6	True	AATAAA	-19	NA	37507178	37536531	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_37507308_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307_37533404_37535545
WTC11_00044560	chr19	+	478	3	FSM	ENSG00000267470.6	ENST00000586013.5	477	3	-1	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAACAGAGATAAGAGAAT	37551226	True	NA	NA	False	AAAACA	-6	NA	37551370	37585374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37551666_37569849_37569997_37585338
WTC11_00044561	chr19	+	2416	4	FSM	ENSG00000267470.6	ENST00000590838.5	2511	4	0	95	0	-63	multi-exon	FALSE	canonical	1	1	junction_2	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGCAGATCTTATGG	37551226	True	NA	-91	True	TATAAA	-29	NA	37551370	37587253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37551666_37566030_37566090_37569849_37569997_37585338
WTC11_00044565	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.40312423743285	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	37816723	True	NA	7	True	AATAAA	-19	NA	37817410	37832160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
WTC11_00044570	chr19	+	1524	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	-157	0	-154	0	multi-exon	FALSE	canonical	3	128	junction_1	1205.61370264277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	NA	False	NA	31	True	AATAAA	-43	NA	38264418	38292468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
WTC11_00044574	chr19	+	2094	2	FSM	ENSG00000167642.13	ENST00000585357.1	3807	2	1713	0	-68	0	multi-exon	FALSE	canonical	3	2937	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	38290082	False	NA	31	True	AATAAA	-43	NA	38290118	38292468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38290281_38290536
WTC11_00044579	chr19	+	1539	7	FSM	ENSG00000099341.12	ENST00000620216.4	1538	7	0	-1	0	0	multi-exon	FALSE	canonical	3	1782	junction_3	96.1087347169283	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGAAATGGAACCCATC	NA	False	NA	27	True	AATAAA	-34	NA	38374549	38383824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116_38382229_38383252
WTC11_00044586	chr19	+	6637	49	NIC	ENSG00000196218.14	novel	15377	105	NA	NA	9158	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	11.9774092913841	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCATCACTGTGTTGGCC	NA	False	NA	0	True	AATAAA	-16	NA	38505372	38587558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_38505399_38505805_38505947_38506302_38506378_38506470_38506547_38506828_38506953_38507711_38507828_38510497_38510566_38510659_38510782_38512071_38512133_38512244_38512484_38515025_38515108_38516086_38516218_38517358_38517692_38519213_38519455_38523027_38523116_38523216_38523310_38525331_38525503_38526992_38527053_38527646_38527785_38528305_38528419_38528598_38528696_38528950_38529058_38532489_38532542_38532670_38532737_38534719_38534820_38535140_38535221_38535315_38535393_38537879_38537961_38543346_38543436_38543531_38543661_38543770_38543876_38546444_38546527_38548232_38548421_38561112_38561455_38564958_38565772_38566910_38566988_38567772_38567918_38572018_38572271_38573176_38573308_38575918_38575962_38577917_38578049_38578143_38578205_38579981_38580129_38580369_38580505_38584942_38585100_38585937_38586003_38586090_38586192_38586524_38586577_38587324
WTC11_00044588	chr19	+	843	9	FSM	ENSG00000196218.14	ENST00000593322.1	843	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.91607978309962	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTAACGGATCCCCGTGG	NA	False	NA	NA	False	NA	NA	NA	38534759	38548372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38534820_38535140_38535221_38535315_38535393_38537879_38537961_38543346_38543436_38543531_38543661_38543770_38543876_38546444_38546527_38548232
WTC11_00044590	chr19	+	780	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	-20	0	-7	0	multi-exon	FALSE	canonical	3	63	junction_1	932.685589125974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38619062	False	NA	16	True	AATAAA	-16	NA	38619074	38636953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
WTC11_00044592	chr19	+	1334	7	FSM	ENSG00000178982.10	ENST00000545173.6	1327	7	-7	0	0	0	multi-exon	FALSE	canonical	3	2394	junction_1	188.733277404913	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGTCTACACACATGTAA	38572446	True	NA	NA	False	ATTAAA	-14	NA	38619185	38635744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992
WTC11_00044593	chr19	+	774	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	-2	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_7	263.201947762782	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	38572446	True	NA	17	True	AATAAA	-17	NA	38619185	38636954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
WTC11_00044594	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	920.778595658165	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572471	True	NA	16	True	AATAAA	-16	NA	38619210	38636953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
WTC11_00044597	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	32.8941864164475	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	38611851	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
WTC11_00044600	chr19	+	4969	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	-11	0	0	0	multi-exon	FALSE	canonical	3	15	junction_18	42.4985587990934	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	38611851	True	NA	NA	False	AATATA	-11	NA	38647648	38731583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
WTC11_00044602	chr19	+	1941	5	FSM	ENSG00000104825.17	ENST00000572515.5	1929	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	326	junction_1	28.9525473836069	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38894861	True	NA	NA	False	NA	NA	NA	38899939	38908538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398
WTC11_00044603	chr19	+	2242	5	FSM	ENSG00000104825.17	ENST00000509705.3	2200	5	-40	-2	-12	2	multi-exon	FALSE	canonical	3	38	junction_1	151.466993104108	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGACTGATCTTGTCTTC	38894861	True	NA	22	True	AATAAA	-27	NA	38899939	38908895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398
WTC11_00044606	chr19	+	1230	2	FSM	ENSG00000128626.12	ENST00000407800.2	1220	2	-10	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCACGGAGGGCTCTTTT	38917310	True	NA	31	True	ATTAAA	-22	NA	38930943	38933162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38931344_38932332
WTC11_00044607	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	204.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	38917310	True	NA	37	True	ATTAAA	-28	NA	38930943	38933168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38930999_38931275_38931344_38932332
WTC11_00044608	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	294.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	38917365	True	NA	26	True	AATAAA	-26	NA	38930998	38933020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38931172_38931275_38931344_38932332
WTC11_00044609	chr19	+	2834	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	159	junction_2	75.9338568576887	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116096	True	NA	5	True	ATTAAA	-15	NA	39125779	39179402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
WTC11_00044610	chr19	+	2761	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	-22	0	-2	0	multi-exon	FALSE	canonical	3	121	junction_1	89.0216792416319	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116096	True	NA	5	True	ATTAAA	-15	NA	39125779	39179402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
WTC11_00044615	chr19	+	4803	12	ISM	ENSG00000179134.16	ENST00000598913.5	2877	13	0	-1510	0	0	intron_retention	FALSE	canonical	3	224	junction_1	155.429663080408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	39338374	True	NA	7	True	AAAACA	-14	NA	39342441	39385698	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
WTC11_00044616	chr19	+	4631	14	FSM	ENSG00000179134.16	ENST00000610417.5	4680	14	47	2	0	0	multi-exon	FALSE	canonical	3	438	junction_2	121.933438045556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	39338400	True	NA	7	True	AAAACA	-14	NA	39342467	39385698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
WTC11_00044619	chr19	+	3664	12	ISM	ENSG00000179134.16	ENST00000314471.10	4519	16	14215	31	-25	-31	3prime_fragment	FALSE	canonical	3	502	junction_11	82.9242410400367	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAACAAA	NA	False	NA	81	True	ATTAAA	-17	NA	39356682	39384895	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
WTC11_00044621	chr19	+	2717	3	FSM	ENSG00000179134.16	ENST00000598605.1	555	3	0	-2162	0	38	multi-exon	FALSE	canonical	3	731	junction_1	62.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTGTGTTTCTAAGC	39380712	False	NA	57	True	NA	NA	NA	39380733	39385748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39380786_39380989_39381114_39383207
WTC11_00044623	chr19	+	3585	4	FSM	ENSG00000063322.15	ENST00000615911.4	3565	4	-20	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	24.5356882927706	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGATTGTGGTTTCGT	39391202	False	NA	13	True	ATTAAA	-14	NA	39391302	39400561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
WTC11_00044624	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	39404036	True	NA	4	True	AATAAA	-15	NA	39406846	39409407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39406929_39407742
WTC11_00044626	chr19	+	8048	19	FSM	ENSG00000090924.15	ENST00000425673.6	8048	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	17.223387057382	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGTTTATTGACTGGC	39409920	True	NA	20	True	AATAAA	-24	NA	39412668	39428415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39413413_39414064_39414196_39414991_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074_39421114_39421282_39421300_39422114_39422289_39422731_39423654_39423732
WTC11_00044627	chr19	+	423	2	FSM	ENSG00000090924.15	ENST00000595920.1	431	2	0	8	0	-8	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGCTTTTATTCCTTG	39413075	False	NA	NA	False	NA	NA	NA	39413149	39414224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39413413_39414064
WTC11_00044634	chr19	+	3698	29	FSM	ENSG00000196235.14	ENST00000402194.6	3698	29	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_4	133.815871629639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCGTGTGTGTGTGT	39445521	False	NA	27	True	AATAAA	-18	NA	39445545	39476666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
WTC11_00044635	chr19	+	3684	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	-6	0	-6	0	multi-exon	FALSE	canonical	3	387	junction_1	87.9080700235623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430143	True	NA	31	True	AATAAA	-22	NA	39445575	39476670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
WTC11_00044637	chr19	+	3774	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	-4	0	-4	0	multi-exon	FALSE	canonical	3	73	junction_3	129.861274509701	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430207	True	NA	31	True	AATAAA	-22	NA	39445639	39476670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
WTC11_00044638	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_13	78.2396566809378	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430251	True	NA	31	True	AATAAA	-22	NA	39445683	39476670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
WTC11_00044653	chr19	+	2274	1	FSM	ENSG00000105197.11	ENST00000595527.2	2274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	39491499	False	NA	22	True	AATAAA	-22	NA	39491511	39493785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39491500_39493800
WTC11_00044655	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	25.5828922328966	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	39497941	True	NA	8	True	TATAAA	-18	NA	39498946	39508469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
WTC11_00044656	chr19	+	2352	8	FSM	ENSG00000090932.11	ENST00000205143.4	2332	8	-21	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_6	25.0126498608449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCTGAATGCTTTGTAT	39497941	True	NA	19	True	TATAAA	-29	NA	39498946	39508480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829
WTC11_00044663	chr19	+	3799	10	NNC	ENSG00000130758.8	novel	3754	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	4	junction_2	20.0024689834055	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCACTTGATTGTGTTCC	40190502	True	NA	5	True	ATTAAA	-18	NA	40191425	40215574	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_40192714_40198374_40198556_40205120_40205297_40205404_40205600_40205910_40206158_40209102_40209220_40212804_40212977_40213075_40213189_40213516_40214222_40214969
WTC11_00044664	chr19	+	682	4	FSM	ENSG00000130758.8	ENST00000594951.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	13.0724477007517	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGGCCATTCGCCGTG	40198325	False	NA	NA	False	NA	NA	NA	40198396	40209202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40198556_40205120_40205297_40205910_40206158_40209102
WTC11_00044665	chr19	+	356	2	FSM	ENSG00000130758.8	ENST00000594569.1	562	2	-195	401	-195	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACGTGAGATGGACATC	NA	False	NA	NA	False	NA	NA	NA	40205334	40206001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40205600_40205910
WTC11_00044667	chr19	+	498	3	FSM	ENSG00000105223.20	ENST00000600479.5	477	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	12	junction_1	657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGCCTTGAGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	40348485	40366464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348725_40365717_40365931_40366418
WTC11_00044668	chr19	+	2371	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	-199	8	-21	0	multi-exon	TRUE	canonical	3	87	junction_2	566.346674357284	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	NA	False	NA	6	True	AGTAAA	-6	NA	40348485	40378475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00044670	chr19	+	2238	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	-111	10	0	0	multi-exon	FALSE	canonical	3	132	junction_1	417.839175268295	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40348508	False	NA	6	True	AGTAAA	-6	NA	40348583	40378475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00044674	chr19	+	1972	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	-6	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	469.768186194351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40343094	True	NA	6	True	AGTAAA	-6	NA	40348671	40378475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00044675	chr19	+	1916	12	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	457.614656183255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343123	True	NA	14	True	AGTAAA	-14	NA	40348700	40378483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00044680	chr19	+	2402	13	NIC	ENSG00000105223.20	novel	2137	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	351	junction_1	359.951810046228	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40348509	False	NA	6	True	AGTAAA	-6	NA	40348584	40378475	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00044681	chr19	+	1628	1	FSM	ENSG00000279759.1	ENST00000622968.1	4765	1	-229	3366	-229	-3366	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTATTTTATTTTGTT	40350035	False	NA	NA	False	ATTAAA	-41	NA	40355612	40357240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40355600_40357200
WTC11_00044688	chr19	+	295	1	FSM	ENSG00000277453.1	ENST00000614440.1	588	1	191	102	191	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGGCAAGTGTTTTAAT	40426260	False	NA	NA	False	NA	NA	NA	40426305	40426600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40426300_40426600
WTC11_00044713	chr19	+	2446	11	FSM	ENSG00000090006.18	ENST00000595118.5	2446	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	54.8740375769817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613201	True	NA	15	True	ATTAAA	-16	NA	40613595	40629817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00044714	chr19	+	2103	9	NIC	ENSG00000090006.18	novel	2446	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	83.5460202523136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40613204	False	NA	14	True	ATTAAA	-15	NA	40613598	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00044716	chr19	+	2510	12	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	83.6312251385917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613694	False	NA	15	True	ATTAAA	-16	NA	40613717	40629817	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00044726	chr19	+	543	4	FSM	ENSG00000077312.9	ENST00000601253.5	519	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	19	junction_3	763.499108636604	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGGGGGCTGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	40750842	40759579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40750978_40751386_40751482_40757331_40757505_40759439
WTC11_00044729	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1551	junction_5	57.6180527265544	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	40736399	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
WTC11_00044735	chr19	+	1769	7	FSM	ENSG00000167578.18	ENST00000597476.5	1982	7	213	0	213	0	multi-exon	FALSE	canonical	3	224	junction_1	27.3901847788988	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGGCCTCCATT	40777108	False	NA	4	True	CATAAA	-13	NA	40779259	40796938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
WTC11_00044736	chr19	+	2120	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	900	junction_1	67.1702315017598	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	40791689	True	NA	23	True	AATAAA	-22	NA	40799170	40808434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
WTC11_00044738	chr19	+	2636	5	FSM	ENSG00000269858.6	ENST00000593726.5	2821	5	185	0	5	0	multi-exon	FALSE	canonical	3	1009	junction_4	38.4472040595932	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGACTCCATCTGCAA	40799636	False	NA	22	True	AATAAA	-21	NA	40799729	40808433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
WTC11_00044739	chr19	+	6409	3	FSM	ENSG00000269858.6	ENST00000599579.5	3894	3	-2495	-20	288	18	multi-exon	FALSE	canonical	3	1009	junction_2	21.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGGCCTTTATTGACC	40801557	False	NA	41	True	AATAAA	-40	NA	40801577	40808452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40807275_40807483_40807552_40807808
WTC11_00044740	chr19	+	3034	4	FSM	ENSG00000269858.6	ENST00000593445.5	3034	4	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_3	19.6015872373189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40804409	False	NA	21	True	AATAAA	-20	NA	40804469	40808432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40806675_40807137_40807275_40807483_40807552_40807808
WTC11_00044744	chr19	+	2924	8	ISM	ENSG00000197408.10	ENST00000324071.10	3071	9	12673	-2	9	2	3prime_fragment	FALSE	canonical	3	28	junction_3	20.4829446224942	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATCTGTGCCATTTTGT	41002791	True	NA	23	True	AATAAA	-33	NA	41003954	41018400	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
WTC11_00044757	chr19	+	3727	15	NIC	ENSG00000105323.18	novel	3925	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	240	junction_13	270.493360663927	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	41251410	True	NA	17	True	NA	NA	NA	41264410	41307598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
WTC11_00044758	chr19	+	4005	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	-225	-737	-186	0	multi-exon	FALSE	canonical	3	116	junction_1	268.991161375163	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	41264082	True	NA	7	True	ATTAAA	-17	NA	41264185	41307787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
WTC11_00044759	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	174.475072776624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	41251371	True	NA	7	True	ATTAAA	-17	NA	41264371	41307787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
WTC11_00044760	chr19	+	3050	15	NIC	ENSG00000105323.18	novel	3043	15	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	335.203387847572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGTTTAAA	41251420	True	NA	36	True	ATTAAA	-16	NA	41264420	41307037	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
WTC11_00044762	chr19	+	2952	15	FSM	ENSG00000105323.18	ENST00000263367.7	2952	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	289.007352847639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	41263485	True	NA	18	True	NA	NA	NA	41265121	41307019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41265344_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
WTC11_00044765	chr19	+	2603	4	FSM	ENSG00000105323.18	ENST00000595806.1	1659	4	-148	-796	-148	47	multi-exon	FALSE	canonical	3	240	junction_2	419.914276966145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGTCCCTGGTTTAAAAT	41302160	False	NA	54	True	NA	NA	NA	41302244	41307834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41302950_41303971_41304262_41305645_41305868_41306448
WTC11_00044767	chr19	+	3327	5	NNC	ENSG00000142039.4	novel	3329	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	57.5239080730786	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGCTATACGTAAATT	41306958	True	NA	12	True	ATTAAA	-14	NA	41310166	41324871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322599
WTC11_00044768	chr19	+	413	2	FSM	ENSG00000142039.4	ENST00000596882.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGAACCCGACTTGACA	41310391	False	NA	NA	False	NA	NA	NA	41310800	41316581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41311016_41316383
WTC11_00044771	chr19	+	302	1	FSM	ENSG00000277744.1	ENST00000616866.1	449	1	4	143	4	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGACGGAGGGCTTCT	41373634	False	NA	NA	False	NA	NA	NA	41373974	41374276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41374000_41374300
WTC11_00044773	chr19	+	728	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	-7	4	0	-1	multi-exon	FALSE	canonical	3	16	junction_3	9.17726659862414	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGAGTCTGTTCGCG	41376508	True	NA	4	True	ATTAAA	-20	NA	41376732	41384079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
WTC11_00044777	chr19	+	1760	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	-18	0	-8	0	multi-exon	TRUE	canonical	3	426	junction_5	30.0166620396073	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41393435	True	NA	32	True	AATAAA	-26	NA	41397799	41425002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
WTC11_00044782	chr19	+	2050	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	-1382	0	-127	multi-exon	FALSE	canonical	3	448	junction_1	16889.7345201161	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAGAATCGCTCGAACC	41589541	True	NA	NA	False	NA	NA	NA	41860254	41872798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
WTC11_00044783	chr19	+	2018	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	3	0	-3	multi-exon	FALSE	canonical	3	28576	junction_5	7588.09788023323	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTTGTTTACACTCAG	41589541	True	NA	10	True	AATAAA	-11	NA	41860254	41872922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
WTC11_00044789	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	57.5003548626254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41880521	True	NA	24	True	AATATA	-18	NA	41883224	41907454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
WTC11_00044790	chr19	+	3243	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	-78	6	0	0	multi-exon	FALSE	canonical	3	123	junction_1	43.6197039355905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	41884342	False	NA	18	True	AATATA	-12	NA	41884369	41907448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
WTC11_00044791	chr19	+	2986	27	FSM	ENSG00000076928.18	ENST00000378152.8	2986	27	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_25	72.8961022001611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41884342	False	NA	24	True	AATATA	-18	NA	41884369	41907454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906702_41906804_41907104
WTC11_00044792	chr19	+	3313	27	NIC	ENSG00000076928.18	novel	3229	29	NA	NA	3390	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	61.4636083217459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41887823	False	NA	22	True	AATATA	-16	NA	41887837	41907452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
WTC11_00044794	chr19	+	2066	16	NIC	ENSG00000076928.18	novel	3393	30	NA	NA	133	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	99.3853555051693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41897897	False	NA	22	True	AATATA	-16	NA	41897943	41907452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41898114_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
WTC11_00044799	chr19	+	4109	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	-13	-114	-13	114	multi-exon	FALSE	canonical	3	49	junction_1	7.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTATTCTGAGTGATTA	42218345	True	NA	NA	False	NA	NA	NA	42220298	42228315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42220388_42224214_42224306_42224386
WTC11_00044800	chr19	+	4279	3	FSM	ENSG00000167625.11	ENST00000597945.1	573	3	0	-3706	0	114	multi-exon	FALSE	canonical	2	7	junction_1	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTATTCTGAGTGATTA	42218423	True	NA	NA	False	NA	NA	NA	42220376	42228315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42220636_42224214_42224306_42224386
WTC11_00044801	chr19	+	312	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGATGGTTCTTACTGG	NA	False	NA	NA	False	NA	NA	NA	42259731	42260043	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_42259700_42260000
WTC11_00044803	chr19	+	6045	20	FSM	ENSG00000079432.9	ENST00000160740.7	6111	20	66	0	66	0	multi-exon	TRUE	canonical	2	4	junction_1	25.5471971021949	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGCTGTAGGCTCT	42283037	False	NA	19	True	ATTAAA	-14	NA	42284085	42295796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42284772_42286770_42286921_42287005_42287241_42287319_42287450_42287544_42287728_42287809_42287976_42288887_42289091_42289180_42289407_42289847_42289952_42290232_42291467_42291557_42291746_42292085_42292208_42292299_42292467_42292568_42292860_42292958_42293282_42293591_42293837_42293934_42294090_42294172_42294305_42294603_42294736_42294823
WTC11_00044805	chr19	+	1628	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	-7	20	-7	-20	multi-exon	FALSE	canonical	3	28	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTACTTTTCATGGT	42302067	True	NA	-18	True	NA	NA	NA	42302090	42310793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42302504_42309578
WTC11_00044806	chr19	+	1541	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	-18	0	16	0	multi-exon	TRUE	canonical	3	20	junction_2	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	42302090	False	NA	3	True	AATAAA	-16	NA	42302113	42310814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42302504_42309578_42310186_42310270
WTC11_00044807	chr19	+	1402	2	FSM	ENSG00000188368.11	ENST00000499536.2	1956	2	533	21	533	-20	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTACTTTTCATGGT	42309215	False	NA	-18	True	NA	NA	NA	42309306	42310793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42310186_42310270
WTC11_00044810	chr19	+	7122	34	NIC	ENSG00000105429.13	novel	11034	41	NA	NA	-53	9923	combination_of_known_splicesites	TRUE	canonical	3	15	junction_4	10.9520199108912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTCGATATAATTCA	42325533	False	NA	20	True	TTTAAA	-28	NA	42325555	42363591	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_42326431_42333604_42333769_42334006_42334214_42335034_42335216_42335296_42335386_42335930_42336347_42336806_42336953_42337083_42337207_42343476_42343632_42343953_42344074_42344440_42344586_42344669_42344834_42348271_42348473_42349498_42349700_42350147_42350385_42351215_42351335_42351428_42351561_42351647_42351762_42352207_42352457_42352927_42353128_42353464_42353676_42353774_42354025_42354587_42354721_42355757_42356006_42356082_42356194_42356334_42356454_42356773_42356982_42357403_42357585_42358143_42358308_42359097_42359243_42360774_42361007_42362089_42362214_42362383_42362598_42363047
WTC11_00044811	chr19	+	11034	41	FSM	ENSG00000105429.13	ENST00000378073.5	11034	41	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_40	11.9686830938078	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTGAGCGCGTCTGCA	42325583	False	NA	11	True	AATAAA	-19	NA	42325608	42378769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42326431_42333604_42333769_42334006_42334214_42335034_42335216_42335296_42335386_42335930_42336347_42336806_42336953_42337083_42337207_42343476_42343632_42343953_42344074_42344440_42344586_42344669_42344834_42348271_42348473_42349498_42349700_42350147_42350385_42351215_42351335_42351428_42351561_42351647_42351762_42352207_42352457_42352927_42353128_42353464_42353676_42353774_42354025_42354587_42354721_42355757_42356006_42356082_42356194_42356334_42356454_42356773_42356982_42357403_42357585_42358143_42358308_42358786_42358955_42359097_42359243_42360774_42361007_42362089_42362214_42362383_42362598_42363047_42363263_42368454_42368663_42368842_42369003_42369530_42369724_42370188_42370360_42370700_42370832_42375506
WTC11_00044812	chr19	+	11137	42	FSM	ENSG00000105429.13	ENST00000251268.11	11137	42	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_41	11.9286496690459	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTGTCTGAGCGCGTC	42324379	True	NA	7	True	AATAAA	-15	NA	42325634	42378765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42326431_42333604_42333769_42334006_42334214_42335034_42335216_42335296_42335386_42335930_42336347_42336806_42336953_42337083_42337207_42343476_42343632_42343953_42344074_42344440_42344586_42344669_42344834_42348271_42348473_42349498_42349700_42350147_42350385_42351215_42351335_42351428_42351561_42351647_42351762_42352207_42352457_42352927_42353128_42353464_42353676_42353774_42354025_42354587_42354721_42355757_42356006_42356082_42356194_42356334_42356454_42356773_42356982_42357403_42357585_42358143_42358308_42358786_42358955_42359097_42359243_42360774_42361007_42362089_42362214_42362383_42362598_42363047_42363263_42368454_42368663_42368842_42369003_42369530_42369724_42370188_42370360_42370700_42370832_42371349_42371483_42375506
WTC11_00044814	chr19	+	580	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	18	junction_1	40.077702307171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580048	True	NA	13	True	TATAAA	-17	NA	43580532	43582098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
WTC11_00044815	chr19	+	567	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	22	junction_1	38.19249489974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580143	True	NA	13	True	TATAAA	-17	NA	43580627	43582098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
WTC11_00044818	chr19	+	2325	2	FSM	ENSG00000124444.16	ENST00000525771.1	2327	2	2	0	2	0	multi-exon	FALSE	canonical	3	140	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTTATGTTGAGGGA	NA	False	NA	NA	False	NA	NA	NA	43596408	43600370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43597194_43598830
WTC11_00044823	chr19	+	1368	4	FSM	ENSG00000167637.18	ENST00000593164.6	1260	4	0	-108	0	108	multi-exon	FALSE	canonical	3	15	junction_1	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGGTATGATTAATTTA	43827534	False	NA	NA	False	NA	NA	NA	43828201	43838188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43828282_43831317_43831382_43835504_43835593_43837052
WTC11_00044828	chr19	+	2707	5	FSM	ENSG00000204920.11	ENST00000611002.4	2732	5	25	0	1	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5666571319572	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGTGTCTGTGCTTCT	43983869	True	NA	20	True	ATTAAA	-17	NA	43984194	43998325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
WTC11_00044837	chr19	+	3929	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	-5	56	0	4	multi-exon	FALSE	canonical	3	20	junction_1	17.1697408250678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTGTTTACATACT	44093814	True	NA	9	True	AATAAA	-22	NA	44094386	44109830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
WTC11_00044842	chr19	+	4611	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_1	16.7284189330612	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	44140600	True	NA	NA	False	ATTAAA	-25	NA	44141549	44160313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
WTC11_00044844	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.8702316016278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	44163825	True	NA	-87	True	NA	NA	NA	44165102	44175158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
WTC11_00044845	chr19	+	820	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	-3	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	45.5543631280254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	44163823	True	NA	NA	False	ATTAAA	-16	NA	44165100	44175429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
WTC11_00044847	chr19	+	2729	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	-2153	0	0	multi-exon	FALSE	canonical	3	25	junction_1	43.1342091616387	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCGTGTCATTTGAAT	44163823	True	NA	17	True	TATAAA	-14	NA	44165100	44177683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
WTC11_00044848	chr19	+	2586	6	FSM	ENSG00000167380.17	ENST00000337433.10	2563	6	-23	0	4	0	multi-exon	FALSE	canonical	3	47	junction_1	37.1020215082683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTGTCATTTGAATTC	44163799	True	NA	19	True	TATAAA	-16	NA	44165076	44177685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
WTC11_00044850	chr19	+	3500	4	ISM	ENSG00000167380.17	ENST00000454662.6	2605	6	3838	4	-1031	0	3prime_fragment	FALSE	canonical	3	67	junction_3	34.8361242901037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCGTGTCATTTGAAT	44167724	False	NA	17	True	TATAAA	-14	NA	44169001	44177683	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_44170096_44172087_44172215_44172859_44172953_44175497
WTC11_00044851	chr19	+	731	2	FSM	ENSG00000167380.17	ENST00000590759.1	734	2	2	1	2	-1	multi-exon	FALSE	canonical	3	152	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCTTTCAGTGTCTTG	44168757	False	NA	NA	False	AATAAA	-11	NA	44170034	44172757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44170096_44172087
WTC11_00044852	chr19	+	3109	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	-60	0	-56	0	multi-exon	FALSE	canonical	3	31	junction_1	5.74804314527997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	44212424	False	NA	15	True	AATAAA	-21	NA	44212471	44237268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
WTC11_00044853	chr19	+	3161	6	NIC	ENSG00000131115.16	novel	545	5	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.0322676461159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	44211932	True	NA	14	True	AATAAA	-20	NA	44212596	44237267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_44212764_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
WTC11_00044858	chr19	+	5792	8	FSM	ENSG00000073008.15	ENST00000425690.8	5792	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	11.4071227301012	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCGAAGTGATTGTTTG	44642698	True	NA	NA	False	AATAAA	-29	NA	44643909	44666162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658901_44661291_44661324_44661739
WTC11_00044863	chr19	+	1465	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	14	junction_4	33.7401105767067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	44776077	True	NA	10	True	AATAAA	-20	NA	44777844	44800634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
WTC11_00044864	chr19	+	1598	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	-22	0	-1	0	multi-exon	FALSE	canonical	3	77	junction_4	15.7673713725529	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	44776100	True	NA	28	True	AATAAA	-38	NA	44777867	44800652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
WTC11_00044865	chr19	+	955	9	NIC	ENSG00000142273.13	novel	1576	11	NA	NA	324	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	38.228752268417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	44778201	True	NA	10	True	AATAAA	-20	NA	44778213	44800634	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_44778285_44780904_44781052_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
WTC11_00044871	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_6	425.975057955275	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	44827610	True	NA	16	True	NA	NA	NA	44846296	44889223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
WTC11_00044874	chr19	+	3435	9	FSM	ENSG00000130204.13	ENST00000592434.5	3415	9	-20	0	-9	0	multi-exon	FALSE	canonical	3	1390	junction_1	476.826947120231	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	44869433	True	NA	19	True	AATATA	-15	NA	44891210	44903686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207
WTC11_00044876	chr19	+	1713	10	FSM	ENSG00000130204.13	ENST00000252487.9	1707	10	-9	3	-9	0	multi-exon	FALSE	canonical	3	362	junction_1	773.439360547706	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	44869433	True	NA	19	True	AATATA	-15	NA	44891210	44903686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891315_44891409_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
WTC11_00044877	chr19	+	1808	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	-43	3	-9	0	multi-exon	FALSE	canonical	3	2683	junction_5	66.8869148264442	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	44869433	True	NA	19	True	AATATA	-15	NA	44891210	44903686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
WTC11_00044883	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	329.56894195297	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	44914234	False	NA	16	True	AATAAA	-11	NA	44914246	44919342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
WTC11_00044884	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	384.190057133185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44914312	False	NA	20	True	AATAAA	-15	NA	44914324	44919346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
WTC11_00044885	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	88.3037686373326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44913925	False	NA	20	True	AATAAA	-15	NA	44914607	44919346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
WTC11_00044886	chr19	+	280	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	-7	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	44908856	True	NA	17	True	AATAAA	-12	NA	44914702	44919343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44919172
WTC11_00044887	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	340.149313619116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	44908856	True	NA	18	True	AATAAA	-13	NA	44914702	44919344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
WTC11_00044891	chr19	+	2670	13	ISM	ENSG00000104853.16	ENST00000337392.10	2470	14	4	6	3	-6	intron_retention	FALSE	canonical	3	694	junction_5	54.0423573587319	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGCACTGCCCCTCCT	44942514	True	NA	28	True	AATAAA	-22	NA	44955383	44993335	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232
WTC11_00044899	chr19	+	1950	20	FSM	ENSG00000104859.15	ENST00000391953.8	1941	20	-9	0	-8	0	multi-exon	TRUE	canonical	3	7	junction_3	44.8697098132556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGTGGGGAGGACAAGG	NA	False	NA	-58	True	NA	NA	NA	45039036	45070855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45039109_45040183_45040312_45052070_45052098_45053110_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
WTC11_00044901	chr19	+	2222	21	FSM	ENSG00000104859.15	ENST00000391952.7	2213	21	-9	0	6	0	multi-exon	FALSE	canonical	3	44	junction_15	37.6925390495254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	45032385	True	NA	43	True	AATAAA	-26	NA	45039055	45070956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
WTC11_00044902	chr19	+	2736	19	FSM	ENSG00000104859.15	ENST00000544944.6	2769	19	33	0	33	0	multi-exon	FALSE	canonical	1	1	junction_14	45.6940982762977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCAGTGTCATCT	45032883	False	NA	41	True	AATAAA	-24	NA	45039553	45070954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
WTC11_00044904	chr19	+	633	6	FSM	ENSG00000104859.15	ENST00000585615.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	19.5714077163601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCCCGTCACCTGTC	45068185	False	NA	29	True	AATAAA	-12	NA	45068201	45070942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
WTC11_00044907	chr19	+	2022	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	-1150	-156	-1076	0	multi-exon	FALSE	canonical	3	358	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	45077760	False	NA	-35	True	ATTAAA	-30	NA	45078118	45090869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45079378_45090106
WTC11_00044910	chr19	+	1655	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	-2	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	70.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	45073369	True	NA	NA	False	AGTAAA	-22	NA	45079257	45091518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45079378_45079906_45080030_45090106
WTC11_00044914	chr19	+	789	6	FSM	ENSG00000007047.16	ENST00000592207.5	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	24.1710570724575	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGACCAGGGCTGGGG	45271464	False	NA	NA	False	NA	NA	NA	45271475	45287664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45271615_45277980_45278043_45278515_45278616_45280373_45280484_45280574_45280735_45287446
WTC11_00044915	chr19	+	619	3	FSM	ENSG00000104892.17	ENST00000494686.1	1194	3	-15	590	-15	17	multi-exon	FALSE	canonical	3	44	junction_2	2	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACGGGCAGGGCGAGG	45340258	True	NA	NA	False	NA	NA	NA	45340724	45346774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45340847_45345533_45345800_45346543
WTC11_00044917	chr19	+	1757	12	FSM	ENSG00000104892.17	ENST00000470402.1	1820	12	63	0	63	0	multi-exon	TRUE	canonical	3	36	junction_9	4.35035858691105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCACCTGACTTCATA	45344996	False	NA	16	True	ATTAAA	-22	NA	45345462	45351520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45345800_45346543_45346775_45347446_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
WTC11_00044918	chr19	+	3164	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	-383	-951	-336	0	multi-exon	FALSE	canonical	3	25	junction_1	93	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	45406271	False	NA	18	True	AATAAA	-18	NA	45406307	45410737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45406725_45407093_45407236_45408132
WTC11_00044923	chr19	+	1953	4	FSM	ENSG00000213889.11	ENST00000415077.1	1953	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCAAATGTTTTTGAA	45498392	True	NA	NA	False	AAAAAG	-44	NA	45498606	45502342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45500067_45500455_45500562_45500649_45500711_45502016
WTC11_00044928	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	602	junction_6	78.8472503571868	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	45494875	True	NA	16	True	AATAAA	-19	NA	45507478	45526983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
WTC11_00044937	chr19	+	577	5	FSM	ENSG00000124440.16	ENST00000533789.5	562	5	-15	0	-11	0	multi-exon	FALSE	canonical	3	44	junction_2	37.7119013044954	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCCAGGCAGCCTGG	46292727	True	NA	NA	False	NA	NA	NA	46297030	46309266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150
WTC11_00044938	chr19	+	2109	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	-8	0	-4	0	multi-exon	FALSE	canonical	3	101	junction_2	14.2563338750029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	46292734	True	NA	54	True	NA	NA	NA	46297037	46331513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
WTC11_00044939	chr19	+	5893	15	FSM	ENSG00000124440.16	ENST00000377670.9	5856	15	-37	0	-37	0	multi-exon	TRUE	canonical	3	75	junction_14	17.7851405529952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTGTTGACTCATC	46292701	True	NA	16	True	CATAAA	-25	NA	46297004	46343433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
WTC11_00044941	chr19	+	2225	13	FSM	ENSG00000124440.16	ENST00000600383.1	2101	13	49	-173	49	173	multi-exon	FALSE	canonical	3	44	junction_1	31.1567497591703	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGGCACAGAGAGATGA	46303882	False	NA	NA	False	AGTAAA	-45	NA	46303897	46338711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
WTC11_00044942	chr19	+	767	7	FSM	ENSG00000124440.16	ENST00000525854.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	47.8875998795327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCAGTAACAGGGCAGT	46305026	False	NA	NA	False	NA	NA	NA	46305041	46312518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46305136_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505
WTC11_00044945	chr19	+	1950	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	-21	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	282.899947269859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	46332390	True	NA	22	True	AATAAA	-18	NA	46347086	46390852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
WTC11_00044946	chr19	+	1821	14	FSM	ENSG00000011485.15	ENST00000478046.5	1886	14	-14	79	0	-79	multi-exon	TRUE	canonical	1	4	junction_12	345.827333186228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCAGACTGTCTTTTA	46332390	True	NA	NA	False	CATAAA	-29	NA	46347086	46392902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46391150_46391259_46392636
WTC11_00044954	chr19	+	721	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	43	junction_1	1581.62377321536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	46601021	False	NA	22	True	GATAAA	-22	NA	46601054	46609305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
WTC11_00044955	chr19	+	2205	6	FSM	ENSG00000160014.17	ENST00000291295.14	2184	6	-21	0	0	0	multi-exon	FALSE	canonical	3	3515	junction_5	232.311514996567	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTCCTCTCCTCCTGT	46549354	True	NA	32	True	AATAAA	-18	NA	46601308	46610782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46601438_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
WTC11_00044956	chr19	+	2960	5	FSM	ENSG00000160014.17	ENST00000595072.2	2960	5	0	0	0	0	multi-exon	FALSE	canonical	3	3515	junction_4	252.429569385205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACCCCGGTTCTAGCAAA	46549390	True	NA	-49	True	NA	NA	NA	46601344	46609234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46601438_46605826_46608341_46608481_46608589_46608845_46608982_46609124
WTC11_00044962	chr19	+	4076	3	FSM	ENSG00000181027.11	ENST00000593877.1	633	3	-242	-3201	-242	89	multi-exon	FALSE	canonical	0	0	junction_2	22.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTCGGGAGTTCGAGA	46745941	False	NA	NA	False	NA	NA	NA	46747416	46758664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46748089_46748514_46748666_46755411
WTC11_00044967	chr19	+	2062	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	-6	466	0	0	multi-exon	FALSE	canonical	3	2804	junction_8	145.97345649124	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	47101815	True	NA	0	True	TTTAAA	-10	NA	47130828	47210170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
WTC11_00044968	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1250.51634767502	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47101845	True	NA	21	True	AATAAA	-17	NA	47130858	47210191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
WTC11_00044969	chr19	+	483	3	FSM	ENSG00000142230.13	ENST00000600753.1	483	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	1510.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTGTTGGGAGAGGA	47101847	True	NA	NA	False	NA	NA	NA	47130860	47153038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47150201_47150376_47152897
WTC11_00044970	chr19	+	1857	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	-6	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	987.283202758449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	47101875	True	NA	0	True	TTTAAA	-10	NA	47130888	47210170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
WTC11_00044971	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	971.949072739925	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	47101875	True	NA	20	True	AATAAA	-16	NA	47130888	47210190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
WTC11_00044973	chr19	+	2341	14	FSM	ENSG00000105321.14	ENST00000643617.1	2163	14	-44	-134	-44	134	multi-exon	TRUE	canonical	3	46	junction_12	47.6210385608028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGAACTGTGTTTCTGG	NA	False	NA	6	True	ATTAAA	-18	NA	47256478	47273835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
WTC11_00044974	chr19	+	2377	14	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-44	134	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	56.69778702255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGAACTGTGTTTCTGG	47256425	True	NA	6	True	ATTAAA	-18	NA	47257487	47273835	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
WTC11_00044976	chr19	+	834	5	FSM	ENSG00000105321.14	ENST00000599398.5	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.5907245915947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGAGGGGCCGGGGCCGA	47256469	False	NA	NA	False	NA	NA	NA	47257531	47260762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47257910_47258329_47258404_47258558_47258664_47260320_47260423_47260587
WTC11_00044977	chr19	+	1755	6	NNC	ENSG00000105321.14	novel	2027	12	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.5772083146051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47265971	False	NA	9	True	AATAAA	-18	NA	47265986	47271953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271725_47271744
WTC11_00044997	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_2	153.511196660048	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	47778902	False	NA	27	True	AATAAA	-17	NA	47778932	47784681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
WTC11_00044999	chr19	+	1032	5	FSM	ENSG00000178980.16	ENST00000598956.5	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1666.56900547202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCACGATTCAATAAATAT	47780357	False	NA	-6	True	NA	NA	NA	47780387	47784648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
WTC11_00045001	chr19	+	2503	1	FSM	ENSG00000178980.16	ENST00000602163.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	47782167	False	NA	28	True	AATAAA	-18	NA	47782179	47784682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47782200_47784700
WTC11_00045002	chr19	+	2206	5	FSM	ENSG00000178150.10	ENST00000315849.5	2206	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	17.7675969112314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGTGCAGTGACTC	48270279	True	NA	5	True	AATAAA	-16	NA	48271396	48287606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
WTC11_00045003	chr19	+	3066	4	ISM	ENSG00000178150.10	ENST00000315849.5	2206	5	138	-721	-88	719	3prime_fragment	FALSE	canonical	3	77	junction_3	13.4412301024373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTTTACTAAGGGC	48271518	True	NA	NA	False	NA	NA	NA	48271534	48288327	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_48271829_48279730_48279809_48282370_48282498_48285760
WTC11_00045004	chr19	+	768	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	-189	70	16	0	multi-exon	FALSE	canonical	3	93	junction_1	15.7321327225523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCCCCGCCCCTT	48325329	True	NA	-59	True	NA	NA	NA	48325362	48330483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
WTC11_00045005	chr19	+	765	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	-4	0	-4	0	multi-exon	FALSE	canonical	2	12	junction_1	56.334319517995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324992	False	NA	11	True	AATAAA	-14	NA	48325342	48330553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
WTC11_00045007	chr19	+	4590	12	NNC	ENSG00000105464.4	novel	5511	14	NA	NA	5429	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	9.92200992701255	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCCTAAGCTCCGTAT	48398006	True	NA	23	True	AATAAA	-23	NA	48399096	48444932	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_48399146_48404733_48405354_48413990_48414106_48414372_48414585_48414863_48415033_48416001_48416156_48419233_48419360_48419584_48419815_48421784_48421946_48441768_48441957_48442149_48442383_48442599
WTC11_00045010	chr19	+	4595	12	FSM	ENSG00000105443.16	ENST00000427476.4	4606	12	11	0	11	0	multi-exon	TRUE	non_canonical	0	0	junction_8	91.5287968956056	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGAATGTGATCTGAT	48461698	True	NA	27	True	ATTAAA	-16	NA	48469218	48482313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478065_48478146_48478274_48478347_48478437_48478593_48479122
WTC11_00045011	chr19	+	4596	12	NNC	ENSG00000105443.16	novel	4443	12	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_8	91.5287968956056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	48461698	True	NA	28	True	ATTAAA	-17	NA	48469218	48482314	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474951_48478066_48478146_48478274_48478347_48478437_48478593_48479122
WTC11_00045012	chr19	+	4652	11	FSM	ENSG00000105443.16	ENST00000493260.5	4652	11	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	24.9967997951738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCCTGCTGACCCCCT	48461826	True	NA	NA	False	NA	NA	NA	48469346	48479382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48478146_48478274_48478347_48478437_48478593_48479122
WTC11_00045013	chr19	+	4465	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	-22	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.9153102583227	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	48461826	True	NA	28	True	ATTAAA	-17	NA	48469346	48482314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
WTC11_00045015	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619144	True	NA	29	True	AATAAA	-23	NA	48619533	48630405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
WTC11_00045016	chr19	+	3272	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	-589	0	20	0	multi-exon	FALSE	canonical	3	35	junction_1	33.0853441874193	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48622597	True	NA	29	True	AATAAA	-23	NA	48624362	48630405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
WTC11_00045018	chr19	+	3016	5	NIC	ENSG00000063176.16	novel	1542	6	NA	NA	42	0	intron_retention	FALSE	canonical	3	10	junction_1	47.4203279195747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48622619	True	NA	29	True	AATAAA	-23	NA	48624384	48630405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_48624440_48625890_48626363_48627691_48627842_48627974_48628070_48628161
WTC11_00045021	chr19	+	1725	1	FSM	ENSG00000087074.8	ENST00000600406.1	1725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTGATTTGTAGCGA	48872500	False	NA	-3	True	NA	NA	NA	48874317	48876042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48874300_48876000
WTC11_00045029	chr19	+	229	1	FSM	ENSG00000260366.1	ENST00000569130.1	274	1	-31	76	-31	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATGTCCTGGGAAGC	48926128	False	NA	NA	False	AATACA	-12	NA	48926139	48926368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48926100_48926400
WTC11_00045032	chr19	+	797	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	-22	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	365.96789476674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	48917969	True	NA	-64	True	CATAAA	-39	NA	48954874	48961713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
WTC11_00045037	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	358.049577572715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48918023	True	NA	21	True	AATAAA	-17	NA	48954928	48961798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
WTC11_00045040	chr19	+	962	8	FSM	ENSG00000183207.14	ENST00000594017.5	959	8	-3	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	146.669140362565	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGGTTTCCAGATG	48985335	True	NA	NA	False	NA	NA	NA	48993886	49010340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972
WTC11_00045045	chr19	+	1956	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	-287	2	-255	0	multi-exon	FALSE	canonical	3	1178	junction_9	144.113466955815	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGGCACCTCGGTTT	49085119	False	NA	19	True	AATAAA	-15	NA	49085163	49108602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
WTC11_00045046	chr19	+	551	7	FSM	ENSG00000104852.15	ENST00000598984.5	547	7	-4	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	732.983723481558	2203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCAGCTGGCTTGCAGCTG	49064711	True	NA	NA	False	NA	NA	NA	49085418	49102118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113
WTC11_00045048	chr19	+	1939	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	-301	-35	-269	0	multi-exon	FALSE	canonical	3	485	junction_9	345.563665499688	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATAGTGGGCACCTCG	NA	False	NA	15	True	AATAAA	-11	NA	49085149	49108598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
WTC11_00045049	chr19	+	3221	3	FSM	ENSG00000104852.15	ENST00000544278.2	3221	3	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_2	179.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGGCACCTCGGTTT	49102396	False	NA	19	True	AATAAA	-15	NA	49102410	49108602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49104736_49107624_49107713_49107794
WTC11_00045057	chr19	+	1638	9	FSM	ENSG00000177380.14	ENST00000602848.5	1638	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	13.5179279107413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTGTTGACTGATTT	NA	False	NA	22	True	NA	NA	NA	49142983	49151026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49143005_49145942_49146006_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
WTC11_00045058	chr19	+	1615	6	FSM	ENSG00000177380.14	ENST00000602897.1	1615	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	6.67532770731145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	NA	False	NA	17	True	NA	NA	NA	49148100	49151021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079
WTC11_00045077	chr19	+	862	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	-12	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2598.50667050648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	49222931	True	NA	23	True	AATAAA	-37	NA	49487602	49491861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
WTC11_00045078	chr19	+	2317	3	FSM	ENSG00000142541.18	ENST00000488946.1	2312	3	-5	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	3770	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCGTCTTTGCACT	49222931	True	NA	13	True	AATAAA	-13	NA	49487602	49492305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49491548_49491728
WTC11_00045079	chr19	+	1235	8	FSM	ENSG00000142541.18	ENST00000624069.3	1122	8	0	-113	0	0	multi-exon	FALSE	canonical	3	346	junction_2	6333.75868675472	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATTGAATGATCCTT	49222931	True	NA	129	True	AATATA	-19	NA	49487602	49492421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489913_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
WTC11_00045080	chr19	+	2054	5	FSM	ENSG00000142541.18	ENST00000676477.1	2049	5	-5	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	3174.07611558072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATTGAATGATCCTT	49222931	True	NA	129	True	AATATA	-19	NA	49487602	49492421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490298_49490474_49490577_49490778_49491548_49491728
WTC11_00045081	chr19	+	2351	5	FSM	ENSG00000142541.18	ENST00000677048.1	2345	5	-6	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2805.4107876566	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCTAAACACTAAAAGTAAA	49222931	True	NA	NA	False	NA	NA	NA	49487602	49492839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490865_49491039_49491100_49491424_49491548_49491728
WTC11_00045082	chr19	+	1664	8	FSM	ENSG00000142541.18	ENST00000678510.1	1861	8	-5	202	0	16	multi-exon	FALSE	canonical	3	16	junction_3	7972.54300453649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATGCTGTGAAGTAAA	49222931	True	NA	NA	False	ACTAAA	-3	NA	49487602	49492855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489913_49490231_49490298_49490479_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
WTC11_00045083	chr19	+	1988	7	FSM	ENSG00000142541.18	ENST00000676556.1	2177	7	-13	202	0	16	multi-exon	FALSE	canonical	3	11745	junction_1	2604.078958523	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATGCTGTGAAGTAAA	49222931	True	NA	NA	False	ACTAAA	-3	NA	49487602	49492855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
WTC11_00045084	chr19	+	2566	3	FSM	ENSG00000142541.18	ENST00000678187.1	2768	3	0	202	0	16	multi-exon	FALSE	canonical	3	16720	junction_1	1282.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATGCTGTGAAGTAAA	49225112	False	NA	NA	False	ACTAAA	-3	NA	49489783	49492855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49491100_49491424_49491548_49491728
WTC11_00045086	chr19	+	1138	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	-5	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1802.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496261	False	NA	39	True	AATAAA	-19	NA	49496364	49499689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49498047_49499511
WTC11_00045087	chr19	+	1065	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	-314	0	-248	0	multi-exon	FALSE	canonical	3	5356	junction_1	1738.3533076513	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496013	False	NA	39	True	AATAAA	-19	NA	49496116	49499689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
WTC11_00045088	chr19	+	576	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	-3	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1515.85635863033	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	49438922	True	NA	58	True	AATAAA	-38	NA	49496430	49499708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
WTC11_00045091	chr19	+	2699	3	FSM	ENSG00000104870.13	ENST00000595881.1	2681	3	-18	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	55	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTGTTCTCATCAT	49512779	False	NA	26	True	AATATA	-18	NA	49513176	49526331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49514487_49524506_49525574_49526009
WTC11_00045094	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.7709623886731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49526849	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
WTC11_00045095	chr19	+	223	2	FSM	ENSG00000142552.8	ENST00000593644.1	223	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGACGAGCGGCGTTTCC	49527390	False	NA	NA	False	AAAAAG	-9	NA	49528543	49537084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49528715_49537032
WTC11_00045099	chr19	+	7416	14	FSM	ENSG00000126464.15	ENST00000418929.7	7416	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	16.6871668794178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCAGGCTGGAGTGCCTC	49589139	True	NA	37	True	NA	NA	NA	49591181	49626439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49591741_49593326_49593440_49594453_49594616_49594696_49598014_49599271_49599939_49601490_49601919_49614532_49614650_49614875_49615010_49615746_49616220_49620351_49620478_49621524_49621623_49624843_49624991_49625104_49625201_49625460
WTC11_00045102	chr19	+	1630	6	FSM	ENSG00000126453.10	ENST00000619007.4	1630	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	413.369278006966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49665073	False	NA	28	True	AATAAA	-38	NA	49665141	49673915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669165_49673697
WTC11_00045104	chr19	+	920	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	-28	1	0	0	multi-exon	FALSE	canonical	3	280	junction_2	324.58157680312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49650841	True	NA	28	True	AATAAA	-38	NA	49665932	49673915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
WTC11_00045108	chr19	+	1543	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	-243	28	-45	0	multi-exon	FALSE	canonical	3	362	junction_2	1809.36580325815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACGCCAATAAATCCT	49676625	False	NA	-1	True	NA	NA	NA	49677027	49688419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
WTC11_00045110	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_1	318.550226673252	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49677062	False	NA	27	True	AATAAA	-13	NA	49677151	49688447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
WTC11_00045111	chr19	+	1192	8	FSM	ENSG00000126457.22	ENST00000610806.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	1704.4433048922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTCCTGGGGGC	49677062	False	NA	30	True	AATAAA	-16	NA	49677151	49688450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49686092_49686244_49686604_49686727_49688161
WTC11_00045118	chr19	+	2865	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	-19	0	-13	0	multi-exon	FALSE	canonical	3	155	junction_1	51.3381597663906	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686179	True	NA	21	True	AATAAA	-16	NA	49691096	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00045119	chr19	+	2929	20	FSM	ENSG00000169169.15	ENST00000392518.8	2910	20	-19	0	-13	0	multi-exon	FALSE	canonical	3	9	junction_2	74.7043665542482	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686179	True	NA	21	True	AATAAA	-16	NA	49691096	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691954_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00045123	chr19	+	2793	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	-8	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	73.6492774335363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686218	True	NA	21	True	AATAAA	-16	NA	49691135	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00045124	chr19	+	2666	19	NIC	ENSG00000169169.15	novel	2846	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	27	junction_16	72.3024554336047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGGTGTCTGCTATG	49686223	True	NA	19	True	AATAAA	-14	NA	49691140	49713729	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49712735_49712850_49712971_49713065_49713419
WTC11_00045125	chr19	+	2442	17	NIC	ENSG00000169169.15	novel	2785	20	NA	NA	-2	0	intron_retention	FALSE	canonical	1	5	junction_12	112.083116480583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686233	True	NA	21	True	AATAAA	-16	NA	49691150	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00045130	chr19	+	812	4	FSM	ENSG00000169169.15	ENST00000595901.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	17.5182444579612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCCAAGGAATAAGGGT	NA	False	NA	-84	True	NA	NA	NA	49711563	49713626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00045136	chr19	+	4014	18	FSM	ENSG00000104973.19	ENST00000593767.3	4003	18	-11	0	-4	0	multi-exon	FALSE	canonical	3	45	junction_17	61.3403912492895	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCCGTCGACTTTT	49811993	True	NA	3	True	AGTAAA	-17	NA	49818277	49840383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49838579
WTC11_00045137	chr19	+	1623	13	FSM	ENSG00000104973.19	ENST00000538643.5	1623	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	81.5402082138349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTTTTTAACACACGC	49812057	True	NA	0	True	NA	NA	NA	49818341	49836962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49818476_49818570_49818617_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
WTC11_00045140	chr19	+	1462	13	FSM	ENSG00000104960.15	ENST00000600603.5	1443	13	-19	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	515.010106427264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGCCTTCTCTGCTCA	49850718	False	NA	26	True	AATAAA	-14	NA	49850734	49860739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49860055_49860184_49860267_49860337_49860565
WTC11_00045144	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	333.947382332407	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	49849158	True	NA	12	True	NA	NA	NA	49851019	49860725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
WTC11_00045145	chr19	+	1577	13	FSM	ENSG00000104960.15	ENST00000599732.5	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	123.676661770387	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTCTGCTCACTGCC	49843015	False	NA	31	True	AATAAA	-19	NA	49851190	49860744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
WTC11_00045146	chr19	+	1587	13	FSM	ENSG00000104960.15	ENST00000601675.5	1587	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	304.709971393564	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49851130	False	NA	27	True	AATAAA	-15	NA	49851224	49860740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
WTC11_00045150	chr19	+	1716	8	FSM	ENSG00000104960.15	ENST00000597793.5	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	1159	junction_1	85.6132738134761	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49856074	False	NA	27	True	AATAAA	-15	NA	49856135	49860740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
WTC11_00045151	chr19	+	1880	1	FSM	ENSG00000104960.15	ENST00000595934.1	1880	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCAGGGTTGGGCTG	49856442	False	NA	NA	False	GGGGCT	-28	NA	49856503	49858383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49856500_49858400
WTC11_00045152	chr19	+	522	6	FSM	ENSG00000104960.15	ENST00000601093.5	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	506.325428948616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTCTCTGCTCACTG	49857832	False	NA	29	True	AATAAA	-17	NA	49857906	49860742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49857978_49858056_49858115_49858548_49858654_49860093_49860184_49860267_49860337_49860613
WTC11_00045158	chr19	+	2831	15	FSM	ENSG00000104946.14	ENST00000596243.5	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	70.9412303478401	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGGCTTCTTGTTGGTG	49878520	False	NA	18	True	ATTAAA	-18	NA	49878549	49888748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49879505_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888230_49888318_49888423
WTC11_00045159	chr19	+	1441	11	FSM	ENSG00000104946.14	ENST00000594984.1	1441	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	80.9728967000687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATAAGCTGGCTTCAT	49882219	False	NA	-23	True	NA	NA	NA	49882265	49888707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888156_49888318_49888423
WTC11_00045161	chr19	+	212	2	FSM	ENSG00000169136.13	ENST00000600336.1	682	2	147	323	142	-323	multi-exon	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGATGGCTCGTAG	49929351	False	NA	NA	False	GGGGCT	-31	NA	49929363	49930906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49929401_49930731
WTC11_00045168	chr19	+	6865	42	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-4	0	intron_retention	FALSE	canonical	3	16	junction_5	21.3843332490597	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	50205120	True	NA	7	True	AATAAA	-16	NA	50205453	50310539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
WTC11_00045176	chr19	+	3543	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	-19	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	200.755985480999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	50369493	True	NA	-25	True	NA	NA	NA	50384322	50417971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00045177	chr19	+	3352	27	FSM	ENSG00000062822.16	ENST00000613923.6	3341	27	-11	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	201.611455513031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCAGGGAGAATTAATA	50369493	True	NA	-21	True	NA	NA	NA	50384322	50417975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00045178	chr19	+	3460	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	-24	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	96.4756767948158	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369493	True	NA	18	True	AATAAA	-18	NA	50384322	50418014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00045179	chr19	+	3538	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	-24	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	162.183296296607	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369493	True	NA	18	True	AATAAA	-18	NA	50384322	50418014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00045180	chr19	+	3467	27	FSM	ENSG00000062822.16	ENST00000599857.7	3467	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	159.855722672058	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTGTGGTCTCTGGGG	50369493	True	NA	22	True	AATAAA	-22	NA	50384322	50418018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00045185	chr19	+	412	3	FSM	ENSG00000062822.16	ENST00000596221.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATATGGTGCTTTGTGGT	50416937	False	NA	14	True	AATAAA	-14	NA	50416952	50418010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50417098_50417171_50417270_50417841
WTC11_00045188	chr19	+	1564	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	861	2327	841	-2	3prime_fragment	FALSE	canonical	3	59	junction_4	4.9180788932265	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATCCTTTTGTCATGT	50419543	True	NA	16	True	NA	NA	NA	50419798	50428987	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
WTC11_00045191	chr19	+	3030	1	ISM	ENSG00000161671.17	ENST00000334976.11	9439	7	7543	3792	2960	3728	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCAGGGGGCGCTGT	50484032	False	NA	NA	False	NA	NA	NA	50484049	50487079	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50484000_50487100
WTC11_00045193	chr19	+	485	2	FSM	ENSG00000235034.7	ENST00000490451.1	477	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTGCAAAATCTTG	50655269	True	NA	12	True	TATAAA	-23	NA	50658487	50659310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50658609_50658946
WTC11_00045223	chr19	+	523	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	-28	1	-6	-1	multi-exon	FALSE	canonical	3	36	junction_3	133.658769509025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATTGAAGTTTGTT	52366935	True	NA	8	True	AATAAA	-16	NA	52369910	52374716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
WTC11_00045225	chr19	+	564	5	FSM	ENSG00000221923.9	ENST00000424032.6	558	5	-6	0	-6	0	multi-exon	FALSE	canonical	2	3	junction_4	130.044944153935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAACATGTCGAAAAAC	52366935	True	NA	-93	True	NA	NA	NA	52369910	52383969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420_52379541_52383848
WTC11_00045226	chr19	+	3512	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	-50	-1204	-44	1204	multi-exon	FALSE	canonical	3	113	junction_3	97.6296858314906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCATTTCTACCAATT	52366897	True	NA	NA	False	AATAAA	-22	NA	52369872	52386999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
WTC11_00045228	chr19	+	4063	7	FSM	ENSG00000167555.14	ENST00000360465.8	3994	7	-69	0	-69	0	multi-exon	FALSE	canonical	3	9	junction_1	7.04745817062199	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATGAATCGTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	52397779	52418401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52415123
WTC11_00045229	chr19	+	625	4	FSM	ENSG00000167555.14	ENST00000598192.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.2306728354819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTGCAATAATACTT	52401406	False	NA	NA	False	ATTAAA	-15	NA	52401946	52408512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52402029_52405906_52406034_52406514_52406644_52408225
WTC11_00045230	chr19	+	3421	1	FSM	ENSG00000167555.14	ENST00000598479.1	4809	1	1447	-59	1447	59	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAATGCACCATTGGGA	NA	False	NA	NA	False	NA	NA	NA	52415050	52418471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52415000_52418500
WTC11_00045233	chr19	+	4148	5	FSM	ENSG00000198482.14	ENST00000359798.9	3585	5	-5	-558	0	558	multi-exon	FALSE	canonical	3	20	junction_2	3.34477204006491	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTGGAAAAATGTTGAA	52526749	True	NA	101	True	NA	NA	NA	52527662	52556894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52547511_52547639_52553106
WTC11_00045237	chr19	+	6470	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	-18	-104	-18	104	multi-exon	FALSE	canonical	3	23	junction_1	19.2527054375915	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCATCTTAGTGGTG	53332255	True	NA	-6	True	AATAAA	-3	NA	53333730	53357010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
WTC11_00045251	chr19	+	4060	5	FSM	ENSG00000160336.17	ENST00000432094.6	4061	5	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.746520826622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATGAGTTTTATTTC	NA	False	NA	28	True	AATATA	-21	NA	53445000	53458260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
WTC11_00045252	chr19	+	625	3	FSM	ENSG00000160336.17	ENST00000613950.1	646	3	0	21	0	2	multi-exon	FALSE	canonical	3	24	junction_2	161.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTCCTTAAGGCTA	NA	False	NA	14	True	AATAAA	-24	NA	53447236	53450333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53447284_53449511_53449639_53449882
WTC11_00045253	chr19	+	4245	2	FSM	ENSG00000160336.17	ENST00000334095.4	3681	2	-228	-336	-228	335	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTGCATCCCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	53449667	53458596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53449966_53454649
WTC11_00045259	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	80.7415630267336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53537750	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
WTC11_00045261	chr19	+	3681	2	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	365	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	53829415	True	NA	31	True	AATAAA	-25	NA	53831762	53837315	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_53832003_53833874
WTC11_00045262	chr19	+	5375	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	53831876	False	NA	30	True	AATAAA	-24	NA	53831939	53837314	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_53831900_53837300
WTC11_00045263	chr19	+	801	3	FSM	ENSG00000179820.16	ENST00000651087.1	778	3	-23	0	-18	0	multi-exon	FALSE	canonical	3	3	junction_1	147	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTCCAGTTCCTGTCC	53866107	False	NA	NA	False	NA	NA	NA	53866134	53873896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53866418_53869689_53869839_53873527
WTC11_00045265	chr19	+	3058	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	-11	7	-11	0	multi-exon	FALSE	canonical	3	87	junction_1	105	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGACTTGTGCTTT	53863186	True	NA	8	True	TATAAA	-4	NA	53867871	53876428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53867944_53869753_53869839_53873527
WTC11_00045266	chr19	+	3127	3	FSM	ENSG00000179820.16	ENST00000391771.1	3111	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	9	junction_1	144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGACTTGTGCTTT	53863181	True	NA	8	True	TATAAA	-4	NA	53867866	53876428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53867944_53869689_53869839_53873527
WTC11_00045268	chr19	+	3174	3	FSM	ENSG00000179820.16	ENST00000391769.2	3186	3	12	0	12	0	multi-exon	FALSE	canonical	2	5	junction_1	146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53869360	True	NA	15	True	TATAAA	-11	NA	53869417	53876435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53869599_53869753_53869839_53873527
WTC11_00045271	chr19	+	3000	19	FSM	ENSG00000126583.12	ENST00000682028.1	2997	19	-3	0	-3	0	multi-exon	FALSE	canonical	3	25	junction_7	13.7163730223733	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTCCCACCCGGCCA	53881159	True	NA	-47	True	NA	NA	NA	53882185	53907594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
WTC11_00045273	chr19	+	649	3	FSM	ENSG00000170906.16	ENST00000471292.5	646	3	-3	0	0	0	multi-exon	FALSE	canonical	3	2134	junction_1	726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCGAGTTTCTATTACC	54086657	True	NA	NA	False	NA	NA	NA	54102851	54106470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102889_54103113_54103189_54105933
WTC11_00045274	chr19	+	439	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	-4	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1359.99308362212	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086657	True	NA	17	True	AATAAA	-19	NA	54102851	54106965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
WTC11_00045275	chr19	+	452	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	-3	-4	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1382.72213405297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086657	True	NA	17	True	AATAAA	-19	NA	54102851	54106965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
WTC11_00045276	chr19	+	355	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	-17	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1612.80624998789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086657	True	NA	17	True	AATAAA	-19	NA	54102851	54106965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
WTC11_00045278	chr19	+	545	3	FSM	ENSG00000170906.16	ENST00000484103.1	541	3	0	-4	0	0	multi-exon	FALSE	canonical	3	3280	junction_2	153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086682	True	NA	17	True	AATAAA	-19	NA	54102876	54106965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54103189_54105933_54106012_54106810
WTC11_00045279	chr19	+	391	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	-8	-4	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1589.30788570231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086682	True	NA	17	True	AATAAA	-19	NA	54102876	54106965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
WTC11_00045280	chr19	+	694	5	FSM	ENSG00000170906.16	ENST00000422029.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1460.61757058444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTATAATTTTTATTG	54103088	True	NA	NA	False	AGTAAA	-10	NA	54103113	54108726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54103189_54105933_54106012_54106352_54106447_54106810_54106971_54108439
WTC11_00045283	chr19	+	1964	14	NIC	ENSG00000105618.14	novel	1833	14	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	202.208955139137	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTCCTTGGGGAGT	NA	False	NA	11	True	ATTAAA	-12	NA	54115648	54131709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54115798_54118240_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
WTC11_00045284	chr19	+	2269	13	FSM	ENSG00000105618.14	ENST00000419967.5	2269	13	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	92.6961508849687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGAGTGATCATTTTT	NA	False	NA	21	True	ATTAAA	-22	NA	54115409	54131719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129371_54131306
WTC11_00045286	chr19	+	1829	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	4	0	0	multi-exon	FALSE	canonical	3	497	junction_1	90.5830554840606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTCCTTGGGGAGT	54102554	True	NA	11	True	ATTAAA	-12	NA	54115753	54131709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
WTC11_00045294	chr19	+	2831	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	-13	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	48.2872747176104	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137748	54155681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
WTC11_00045295	chr19	+	4357	17	FSM	ENSG00000088038.19	ENST00000617930.2	4349	17	-8	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	119.575143084798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137773	54155681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153083_54153714
WTC11_00045296	chr19	+	2865	18	NIC	ENSG00000088038.19	novel	2818	18	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_7	96.2503583779784	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCAGCGGCCT	NA	False	NA	31	True	AATAAA	-13	NA	54137716	54155680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145594_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
WTC11_00045297	chr19	+	4118	17	FSM	ENSG00000088038.19	ENST00000358389.7	4118	17	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_9	44.7611717898448	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCAGCGGCCT	54141385	False	NA	31	True	AATAAA	-13	NA	54141395	54155680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
WTC11_00045299	chr19	+	541	2	FSM	ENSG00000088038.19	ENST00000471126.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	54153711	False	NA	32	True	AATAAA	-14	NA	54153723	54155681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54153841_54155257
WTC11_00045302	chr19	+	2309	5	FSM	ENSG00000170892.13	ENST00000302937.8	2294	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	92	junction_1	138.90734321842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTATTTTGTCACGTT	54189900	True	NA	NA	False	NA	NA	NA	54190252	54194536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54190451_54191360_54191608_54191720_54191965_54192115_54192374_54193174
WTC11_00045304	chr19	+	1570	5	NNC	ENSG00000170892.13	novel	2160	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	178.216862277395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54189990	True	NA	12	True	AATAAA	-18	NA	54190342	54193666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_54190556_54191244_54191608_54191720_54191965_54192115_54192374_54193174
WTC11_00045305	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	31	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54189990	True	NA	12	True	AATAAA	-18	NA	54190342	54193666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54191965_54192115_54192374_54193174
WTC11_00045307	chr19	+	2154	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	0	6	0	-6	multi-exon	FALSE	canonical	3	386	junction_1	29.4656108408128	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATGTGCAGTTTTATT	54190955	False	NA	NA	False	AAGAAA	-44	NA	54191307	54194526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
WTC11_00045312	chr19	+	958	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	-14	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3936.73248265614	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102655	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
WTC11_00045313	chr19	+	786	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	-14	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3716.94978275198	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102655	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
WTC11_00045314	chr19	+	726	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	-20	3	-20	0	multi-exon	FALSE	canonical	3	7752	junction_1	638.75156011986	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	54200873	False	NA	23	True	AATAAA	-17	NA	54201112	54207644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
WTC11_00045315	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	54199010	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54201282_54201486_54201610_54206275
WTC11_00045316	chr19	+	2607	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	30.7943176576459	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	54415426	54433711	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
WTC11_00045317	chr19	+	1909	14	FSM	ENSG00000167614.14	ENST00000301194.8	2088	14	-4	183	-4	0	multi-exon	FALSE	canonical	2	7	junction_12	30.7507636889821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGGTCCTCCTTATTT	NA	False	NA	17	True	AATAAA	-21	NA	54415426	54436717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54435827_54435874_54436087_54436172_54436332
WTC11_00045318	chr19	+	2080	14	FSM	ENSG00000167614.14	ENST00000376530.8	2056	14	-24	0	9	0	multi-exon	FALSE	canonical	3	57	junction_12	20.0159699553741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTCTTCTGATTCTAAA	NA	False	NA	NA	False	TTTAAA	-30	NA	54415439	54436904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54435827_54435874_54436090_54436172_54436332
WTC11_00045326	chr19	+	5872	15	NIC	ENSG00000167615.17	novel	5789	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_1	50.6454260883791	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	54448196	True	NA	15	True	ATTAAA	-15	NA	54449223	54462015	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
WTC11_00045332	chr19	+	515	2	FSM	ENSG00000131037.15	ENST00000592044.1	515	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGGGGCGCGGGCCGCGG	55080425	False	NA	NA	False	NA	NA	NA	55080436	55081327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55080855_55081230
WTC11_00045336	chr19	+	3240	19	FSM	ENSG00000160469.17	ENST00000309383.6	3277	19	37	0	37	0	multi-exon	TRUE	canonical	1	4	junction_3	11.3731598701548	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAATAATAAATAGCC	55283849	True	NA	72	True	NA	NA	NA	55284033	55312562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55284579_55287006_55287102_55287213_55287300_55289479_55289621_55294016_55294134_55294213_55294248_55294328_55294398_55301511_55301659_55302136_55302169_55302696_55302868_55303310_55303409_55303666_55303827_55304049_55304111_55304550_55304921_55305320_55305370_55305462_55305587_55306251_55306451_55308638_55308729_55311910
WTC11_00045340	chr19	+	2077	8	FSM	ENSG00000133247.14	ENST00000445196.5	2077	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	41.0569539711333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	55335211	True	NA	21	True	ATTAAA	-18	NA	55339917	55348120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55339958_55341793_55342047_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
WTC11_00045348	chr19	+	854	4	FSM	ENSG00000108107.15	ENST00000559463.5	852	4	0	-2	0	2	multi-exon	FALSE	canonical	3	6251	junction_3	158.966104004037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGACTGGGCCTCCCT	55255245	True	NA	31	True	AATAAA	-20	NA	55385960	55388375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55386439_55386569_55386694_55387929_55388049_55388242
WTC11_00045349	chr19	+	5610	2	FSM	ENSG00000108107.15	ENST00000426763.3	5620	2	0	10	0	5	multi-exon	FALSE	canonical	3	6595	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGAAATATGCATGTG	55385500	True	NA	24	True	AATAAA	-22	NA	55386349	55392090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55386439_55386569
WTC11_00045352	chr19	+	1187	2	FSM	ENSG00000171443.7	ENST00000301073.4	1185	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	25	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGTGTTCCGTGC	55600166	True	NA	16	True	AATAAA	-16	NA	55600285	55603138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55600409_55602074
WTC11_00045353	chr19	+	1173	2	FSM	ENSG00000213015.9	ENST00000325333.10	1156	2	-17	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTCTTCCTTGCG	55639605	False	NA	15	True	AATAAA	-15	NA	55640984	55643470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55641184_55642496
WTC11_00045355	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	3055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	55637513	True	NA	16	True	AATAAA	-18	NA	55643648	55645623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55643775_55644552
WTC11_00045363	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.2728975138735	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620905	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
WTC11_00045369	chr19	+	2449	11	NIC	ENSG00000063245.15	novel	16219	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	264	junction_8	107.346914254672	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	55660007	True	NA	31	True	AATAAA	-23	NA	55675225	55695766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
WTC11_00045372	chr19	+	1945	5	FSM	ENSG00000167685.15	ENST00000337080.8	1943	5	-2	0	2	0	multi-exon	FALSE	canonical	3	287	junction_1	53.5601297608585	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	56136507	True	NA	22	True	AATAAA	-22	NA	56141284	56160893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56141358_56146246_56146421_56146889_56147209_56158493_56158603_56159623
WTC11_00045374	chr19	+	1935	5	FSM	ENSG00000167685.15	ENST00000592949.5	1906	5	-36	7	2	0	multi-exon	FALSE	canonical	3	189	junction_4	92.5401939699718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	56136507	True	NA	15	True	AATAAA	-15	NA	56141284	56160886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56141358_56146246_56146421_56146889_56147209_56158493_56158603_56159626
WTC11_00045377	chr19	+	264	1	FSM	ENSG00000279794.1	ENST00000623020.1	674	1	133	277	133	-277	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATTAAAATGTTCTTT	56149938	False	NA	NA	False	NA	NA	NA	56149949	56150213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56149900_56150200
WTC11_00045378	chr19	+	5538	2	FSM	ENSG00000167685.15	ENST00000587236.1	5565	2	27	0	27	0	multi-exon	FALSE	canonical	3	325	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	56154316	False	NA	15	True	AATAAA	-15	NA	56154327	56160886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56158603_56159623
WTC11_00045383	chr19	+	3613	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	-146	-1478	0	0	multi-exon	FALSE	canonical	3	31	junction_5	40.2720746920245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	56368095	True	NA	26	True	AATAGA	-20	NA	56368172	56379828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
WTC11_00045384	chr19	+	567	4	FSM	ENSG00000240225.10	ENST00000596094.5	550	4	-17	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	15.1730755689881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTTTGAGTTCCTAAA	56366742	True	NA	NA	False	NA	NA	NA	56368318	56373757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530
WTC11_00045401	chr19	+	5617	4	FSM	ENSG00000197951.10	ENST00000599599.7	3558	4	-64	-1995	-62	0	multi-exon	FALSE	canonical	3	10	junction_3	29.743346594939	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	NA	False	NA	NA	False	NA	NA	NA	56595237	56626481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56595429_56601506_56601592_56613811_56613939_56621267
WTC11_00045415	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	57361376	True	NA	61	True	AATGAA	-21	NA	57363550	57365405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57363704_57364814
WTC11_00045416	chr19	+	544	3	FSM	ENSG00000188785.12	ENST00000598895.5	571	3	0	27	0	-27	multi-exon	FALSE	canonical	3	58	junction_1	11	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTTATACCCCCTT	57388950	True	NA	NA	False	NA	NA	NA	57389883	57397324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57390115_57394187_57394224_57397047
WTC11_00045423	chr19	+	223	2	FSM	ENSG00000186272.13	ENST00000597350.1	391	2	168	0	168	0	multi-exon	FALSE	canonical	3	17	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCCTGACACCTACG	57412751	False	NA	NA	False	NA	NA	NA	57413540	57418038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57413637_57417911
WTC11_00045425	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	57431331	True	NA	17	True	TTTAAA	-4	NA	57435346	57438457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57435668_57438101
WTC11_00045426	chr19	+	699	3	NNC	ENSG00000186230.7	novel	677	2	NA	NA	0	-2469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTAGGGCGCCCTGGGC	57431331	True	NA	NA	False	NA	NA	NA	57435346	57441138	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_57435668_57438101_57438455_57441113
WTC11_00045427	chr19	+	943	3	Fusion	ENSG00000186230.7_ENSG00000276449.1	novel	677	2	NA	NA	0	-1873	multi-exon	FALSE	non_canonical	0	0	junction_2	55.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTATGAGCTATGTGTC	57431331	True	NA	NA	False	NA	NA	NA	57435346	57451138	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_57435668_57438101_57438457_57450871
WTC11_00045428	chr19	+	602	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	144	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTTCGTCTTAAGTT	57431331	True	NA	16	True	TTTAAA	-3	NA	57435346	57438456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57435594_57438101
WTC11_00045434	chr19	+	2574	4	FSM	ENSG00000152439.13	ENST00000598770.5	2019	4	-52	-503	-32	245	multi-exon	FALSE	canonical	3	19	junction_1	11.2249721603218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGCTTCCAGAGACTGA	57499228	True	NA	24	True	AATAAA	-24	NA	57499882	57508474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57500114_57504659_57504787_57505301_57505401_57506357
WTC11_00045435	chr19	+	2549	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	-272	0	272	multi-exon	FALSE	canonical	3	8	junction_1	15.5205956357638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAATTTTCACCAGTT	57499283	True	NA	51	True	CATAAA	-34	NA	57499937	57508501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
WTC11_00045436	chr19	+	537	2	FSM	ENSG00000152439.13	ENST00000601958.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTGCTGAGCAGAGTG	57504234	False	NA	NA	False	NA	NA	NA	57504888	57506382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57505401_57506357
WTC11_00045438	chr19	+	6326	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	-1966	-1500	-1316	0	multi-exon	FALSE	canonical	3	54	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	NA	False	NA	18	True	AATAAA	-18	NA	57582293	57593890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57584613_57588538_57588666_57590010
WTC11_00045442	chr19	+	4900	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	-609	0	-74	0	multi-exon	FALSE	canonical	3	69	junction_1	37.6061460697879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	NA	False	NA	18	True	AATAAA	-18	NA	57583535	57593890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
WTC11_00045443	chr19	+	5123	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	47.932823363073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	NA	False	NA	18	True	AATAAA	-18	NA	57583535	57593890	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
WTC11_00045445	chr19	+	4801	3	FSM	ENSG00000183647.11	ENST00000332854.11	4793	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599013	True	NA	9	True	AATAAA	-21	NA	57599876	57610098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57600135_57604276_57604407_57605685
WTC11_00045446	chr19	+	637	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	10	junction_3	9.62635271879577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599036	True	NA	NA	False	AATAAA	-29	NA	57599899	57612722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
WTC11_00045447	chr19	+	517	2	FSM	ENSG00000213762.12	ENST00000600344.1	483	2	-21	-13	-16	13	multi-exon	FALSE	canonical	3	243	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCATTTCTAATCT	57606375	True	NA	NA	False	NA	NA	NA	57614216	57619641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57614504_57619411
WTC11_00045449	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	16	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	57606400	True	NA	18	True	AATAAA	-21	NA	57614241	57624724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57614504_57619411_57619509_57620159
WTC11_00045451	chr19	+	3774	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	-1	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3045763140937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	57631823	True	NA	8	True	AATAAA	-16	NA	57633166	57644041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
WTC11_00045454	chr19	+	2577	5	FSM	ENSG00000121417.14	ENST00000299871.9	2577	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.4212513901843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATAAAAGCATTAT	57631872	True	NA	-12	True	NA	NA	NA	57633215	57642737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57639911_57640068_57640703
WTC11_00045455	chr19	+	3997	2	ISM	ENSG00000121417.14	ENST00000299871.9	2577	5	6193	-1304	6184	0	3prime_fragment	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	57638065	False	NA	8	True	AATAAA	-16	NA	57639408	57644041	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_57640068_57640703
WTC11_00045468	chr19	+	6889	3	FSM	ENSG00000198466.12	ENST00000339656.8	6885	3	-4	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_1	25	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATACCTCTTTCCTGT	57848282	True	NA	16	True	ATTAAA	-28	NA	57849854	57865117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57850072_57856103_57856234_57858575
WTC11_00045474	chr19	+	709	3	FSM	ENSG00000171606.18	ENST00000597528.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGACACCATTCCAGG	58183482	False	NA	NA	False	NA	NA	NA	58183493	58187023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58183999_58185711_58185839_58186946
WTC11_00045475	chr19	+	2426	7	ISM	ENSG00000171606.18	ENST00000610905.4	2559	8	467	-10	0	0	3prime_fragment	FALSE	canonical	3	87	junction_4	17.3341345968647	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	58183909	False	NA	33	True	AATAAA	-22	NA	58183920	58213562	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
WTC11_00045476	chr19	+	4852	2	FSM	ENSG00000171606.18	ENST00000595146.1	4852	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTATATAATAACTTTAAA	58208086	False	NA	NA	False	AATAAA	-10	NA	58208097	58213423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58211687_58212160
WTC11_00045478	chr19	+	3271	7	FSM	ENSG00000198131.15	ENST00000599227.5	3587	7	316	0	-4	0	multi-exon	TRUE	canonical	3	62	junction_5	60.9562684772179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224934	True	NA	NA	False	AATAAA	-18	NA	58228909	58263644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
WTC11_00045480	chr19	+	3705	8	FSM	ENSG00000198131.15	ENST00000652201.1	3705	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	87.3325803571424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGCATGGTGGCTC	58224963	True	NA	NA	False	AGTAAA	-34	NA	58228938	58263676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229257_58229467_58229571_58230393_58230498_58237248_58237335_58243964_58244057_58246300_58246428_58246745_58246795_58260850
WTC11_00045481	chr19	+	3551	7	NIC	ENSG00000198131.15	novel	3516	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	66.8779983751508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224999	True	NA	NA	False	AATAAA	-18	NA	58228974	58263644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
WTC11_00045482	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	73.7829022651364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224999	True	NA	NA	False	AATAAA	-18	NA	58228974	58263644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
WTC11_00045483	chr19	+	2818	6	FSM	ENSG00000198131.15	ENST00000596652.5	2818	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	47.985831242149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAACACTTGTAATCCC	58229447	False	NA	NA	False	AAGAAA	-34	NA	58229464	58263190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
WTC11_00045485	chr19	+	709	6	NNC	ENSG00000198131.15	novel	555	7	NA	NA	0	-2648	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_5	66.7311021938046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	58229450	False	NA	12	True	AATAAA	-19	NA	58229467	58274599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
WTC11_00045487	chr19	+	777	6	NIC	ENSG00000198131.15	novel	895	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	102.473411185536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGGCTCTTGGTAA	58229457	False	NA	NA	False	NA	NA	NA	58229474	58277456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58229571_58230393_58230498_58243964_58244057_58246300_58246428_58246710_58246795_58277182
WTC11_00045489	chr19	+	9088	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	22	0	22	0	multi-exon	TRUE	canonical	3	41	junction_3	8.05536398239638	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	58275352	True	NA	14	True	AATAAA	-14	NA	58278976	58302791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
WTC11_00045493	chr19	+	943	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	42	junction_2	132.969503604732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	58299815	True	NA	13	True	NA	NA	NA	58305352	58315202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
WTC11_00045494	chr19	+	3889	2	FSM	ENSG00000142396.10	ENST00000590505.1	3889	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTTGTCTGTCTCATT	58309002	False	NA	14	True	NA	NA	NA	58309029	58315203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58312463_58314747
WTC11_00045496	chr19	+	983	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	-6	0	-4	0	multi-exon	TRUE	canonical	3	6	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	58347374	True	NA	NA	False	NA	NA	NA	58347746	58354502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58347845_58353378_58353475_58353713
WTC11_00045497	chr19	+	1784	2	FSM	ENSG00000268895.6	ENST00000670460.1	1869	2	44	41	9	-41	multi-exon	FALSE	canonical	1	2	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGGATCACCTGAGCC	58347389	True	NA	NA	False	NA	NA	NA	58347761	58355414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58347845_58353713
WTC11_00045502	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_4	354.831914432735	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	58285790	True	NA	47	True	AATAAA	-33	NA	58387288	58394806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
WTC11_00045508	chr19	+	5066	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	-12	0	-12	0	multi-exon	FALSE	canonical	2	9	junction_3	2.49443825784929	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	58466757	True	NA	NA	False	AATAAA	-21	NA	58467067	58475436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
WTC11_00045510	chr19	+	533	5	FSM	ENSG00000130726.12	ENST00000593582.5	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	904.260609558992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGCAAGCTCCTGGCCT	58543048	True	NA	NA	False	NA	NA	NA	58544090	58547626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58544212_58545424_58545538_58545763_58545897_58547375_58547512_58547596
WTC11_00045513	chr19	+	1552	10	FSM	ENSG00000130726.12	ENST00000597136.1	1552	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1039.35204173883	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGCTGGTTGGGGGACT	58548274	True	NA	-36	True	AATAAA	-21	NA	58548293	58550722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58548409_58548485_58548593_58548739_58548777_58548885_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
WTC11_00045517	chr19	-	4605	1	FSM	ENSG00000282458.1	ENST00000633719.1	4412	1	25	-218	-7	218	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATCTTGTCTACAAGAT	-63984	False	NA	NA	False	NA	NA	NA	66499	61894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_61900_66500
WTC11_00045518	chr19	-	2947	1	FSM	ENSG00000281379.2	ENST00000633205.1	211	1	-82	-2654	22	-2088	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCCGAGAAATCAGCT	-191384	False	NA	NA	False	AATATA	-28	NA	191407	188460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_188500_191400
WTC11_00045521	chr19	-	1308	7	NNC	ENSG00000141934.10	novel	1279	6	NA	NA	0	84842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	295.055362036799	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGGCCTTACTCCGTC	-287502	True	NA	NA	False	NA	NA	NA	291403	196197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_196227_281042_281538_282133_282311_282751_282810_287473_287752_288019_288172_291284
WTC11_00045522	chr19	-	1761	3	FSM	ENSG00000282508.2	ENST00000631858.1	1761	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	76	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGGACAGAGGTCAGCG	-202168	False	NA	NA	False	NA	NA	NA	202192	200111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_201755_201814_202040
WTC11_00045523	chr19	-	565	3	FSM	ENSG00000282508.2	ENST00000633402.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_2	66	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGGCCCATGGGGCTC	-203941	True	NA	NA	False	NA	NA	NA	203987	201196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_201755_201814_203946
WTC11_00045524	chr19	-	756	2	FSM	ENSG00000282508.2	ENST00000631764.1	736	2	0	-20	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGGCCCATGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	205459	201196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_205169
WTC11_00045526	chr19	-	566	3	FSM	ENSG00000282508.2	ENST00000631864.1	564	3	0	-2	0	0	multi-exon	FALSE	canonical	3	143	junction_2	10.5	2667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCAGGCCCAGCCTCT	-204055	False	NA	NA	False	NA	NA	NA	204079	201359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_201755_201814_203874
WTC11_00045535	chr19	-	558	3	NIC	ENSG00000282508.2	novel	492	2	NA	NA	-129	9	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	1	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGCTAATTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	229991	214314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_214452_221140_221206_229635
WTC11_00045537	chr19	-	1394	6	FSM	ENSG00000141934.10	ENST00000327790.7	1397	6	0	3	0	0	multi-exon	FALSE	canonical	3	38	junction_5	307.878547482607	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-291173	False	3901	-23	True	AGTAAA	-22	NA	291185	281042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_290951
WTC11_00045538	chr19	-	1235	6	NIC	ENSG00000141934.10	novel	1279	6	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	319.446646562458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-291329	False	NA	-23	True	AGTAAA	-22	NA	291341	281042	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288190_291284
WTC11_00045539	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	309.872877160942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287492	True	NA	-23	True	AGTAAA	-22	NA	291393	281042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
WTC11_00045540	chr19	-	1279	6	FSM	ENSG00000141934.10	ENST00000434325.7	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	78.5187875606851	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287502	True	NA	-23	True	AGTAAA	-22	NA	291403	281042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291284
WTC11_00045541	chr19	-	6458	3	FSM	ENSG00000141934.10	ENST00000621795.1	6455	3	0	-3	0	0	multi-exon	FALSE	canonical	3	788	junction_2	31	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-288525	False	NA	-23	True	AGTAAA	-22	NA	288537	281042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751
WTC11_00045544	chr19	-	581	4	FSM	ENSG00000141934.10	ENST00000591572.2	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	369.132315933822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTGCATGGTGTTCTTG	-287481	True	NA	NA	False	NA	NA	NA	291382	282774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_282810_287473_287752_288019_288190_291284
WTC11_00045545	chr19	-	687	2	FSM	ENSG00000141934.10	ENST00000589672.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTCCTAGCCGTCTG	-288526	False	NA	NA	False	NA	NA	NA	288538	287583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_287752_288019
WTC11_00045546	chr19	-	1748	4	FSM	ENSG00000105556.12	ENST00000619835.4	1748	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	119.337988736008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-308899	False	NA	-3	True	ATTAAA	-18	NA	308923	305572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_306712_307118_307537_308576_308666_308821
WTC11_00045547	chr19	-	4240	14	NNC	ENSG00000105556.12	novel	2769	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_13	68.6576275623125	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341594	True	NA	-3	True	ATTAAA	-18	NA	344778	305572	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_343284
WTC11_00045548	chr19	-	2769	14	FSM	ENSG00000105556.12	ENST00000264819.7	2769	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	40.056469016367	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341612	True	NA	-3	True	ATTAAA	-18	NA	344796	305572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
WTC11_00045552	chr19	-	3111	2	FSM	ENSG00000183186.8	ENST00000332235.8	3099	2	0	-12	0	12	multi-exon	FALSE	canonical	3	46	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTTCCCTGGCTGTT	-408358	True	NA	1	True	AATAAA	-26	NA	409147	405432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_408402_409005
WTC11_00045553	chr19	-	1654	3	FSM	ENSG00000129946.11	ENST00000588376.5	1551	3	-74	-29	-74	29	multi-exon	FALSE	canonical	3	42	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCGGGGCTGGGGCTGGG	NA	False	NA	25	True	NA	NA	NA	422902	416559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_417323_418922_419057_422145
WTC11_00045554	chr19	-	2525	13	FSM	ENSG00000129946.11	ENST00000264554.11	2525	13	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	8.03594355933943	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCCCACCTGCATAT	-460880	True	NA	-4	True	ATTAAA	-20	NA	461033	416588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_417323_418922_419057_422145_422457_425096_425232_430683_430748_434708_434866_436164_436292_436379_436432_436629_436684_438717_438838_438969_439031_440861_440933_460528
WTC11_00045555	chr19	-	2405	13	NNC	ENSG00000129946.11	novel	2525	13	NA	NA	146	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	13.0732445178013	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAAGCCCACCTGCATA	-460877	False	NA	-5	True	ATTAAA	-19	NA	460887	416589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_417323_418922_419057_422145_422457_425096_425232_430683_430748_434708_434866_436164_436292_436379_436459_436629_436684_438717_438838_438969_439031_440861_440933_460528
WTC11_00045556	chr19	-	1151	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	-88	-330	-71	-57	multi-exon	FALSE	canonical	3	39	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACCTTATTTATAAAAA	-571809	False	NA	NA	False	AATAAA	-19	NA	571845	566879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_567625_571439
WTC11_00045557	chr19	-	1320	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	-8	-270	-8	270	multi-exon	FALSE	canonical	3	32	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTACGATTAACTGCCT	-571342	True	NA	NA	False	NA	NA	NA	571782	566547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_567625_571439_571597_571696
WTC11_00045558	chr19	-	3786	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	-15	0	15	multi-exon	TRUE	canonical	3	641	junction_6	84.7132073528089	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGCACGCCCTGCGGG	-621965	True	NA	-20	True	AATAAA	-37	NA	633537	617205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
WTC11_00045559	chr19	-	472	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	-3	0	0	multi-exon	FALSE	canonical	3	902	junction_1	18.5711843695788	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	-617967	False	NA	-35	True	AATAAA	-22	NA	617997	617220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_617656_617776
WTC11_00045560	chr19	-	1229	4	FSM	ENSG00000099821.14	ENST00000587057.5	1229	4	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	92.5250716772967	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGCCACTGTCTTCA	-618728	False	NA	-42	True	AATAAA	-15	NA	618758	617227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_618587_618704
WTC11_00045561	chr19	-	490	5	FSM	ENSG00000099821.14	ENST00000589961.2	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_3	129.403197410265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTGTCCGCTTGCAC	-619196	False	NA	NA	False	NA	NA	NA	619226	617645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617850_618487_618587_618704_618761_618996_619111_619209
WTC11_00045563	chr19	-	400	1	FSM	ENSG00000261204.1	ENST00000564240.1	433	1	23	10	23	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACGTTGCTTTAAGGC	NA	False	NA	NA	False	NA	NA	NA	637514	637114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_637100_637500
WTC11_00045564	chr19	-	2090	4	FSM	ENSG00000070423.18	ENST00000586749.1	2092	4	2	0	2	0	multi-exon	FALSE	canonical	3	851	junction_2	53.1057644914582	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCGGTGCTGTGGCTT	-650566	False	NA	-9	True	AATACA	-13	NA	650592	647529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_649749_650233
WTC11_00045565	chr19	-	1980	9	FSM	ENSG00000070423.18	ENST00000605891.5	1671	9	-20	-289	0	289	multi-exon	TRUE	canonical	3	25	junction_6	293.136486981747	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCGGGTTCCTGGCCCCT	-658042	True	NA	NA	False	NA	NA	NA	663214	647236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651916_652232_652297_652825_652885_663046
WTC11_00045566	chr19	-	1631	9	FSM	ENSG00000070423.18	ENST00000292363.10	1631	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_5	60.578461518926	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	-658042	True	NA	-5	True	AATACA	-17	NA	663214	647525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651856_652232_652297_652825_652885_663046
WTC11_00045567	chr19	-	963	9	FSM	ENSG00000070423.18	ENST00000589762.5	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	245.18229824969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCACGTCGGCCGTC	-658061	True	NA	NA	False	NA	NA	NA	663233	648131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651691_651856_652232_652297_652825_652885_663046
WTC11_00045569	chr19	-	2682	8	FSM	ENSG00000129951.19	ENST00000520876.8	2306	8	-376	0	-376	0	multi-exon	FALSE	canonical	3	208	junction_7	55.681308921983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	NA	False	NA	-30	True	AATAAA	-15	NA	822331	812487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
WTC11_00045570	chr19	-	2387	7	FSM	ENSG00000129951.19	ENST00000359894.6	2387	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	58.4486954516523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	-817847	True	NA	-30	True	AATAAA	-15	NA	821952	812487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_813896_814433_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
WTC11_00045571	chr19	-	3011	7	ISM	ENSG00000129951.19	ENST00000520876.8	2306	8	-376	0	-376	0	intron_retention	FALSE	canonical	3	293	junction_2	30.8040401390611	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	NA	False	NA	-30	True	AATAAA	-15	NA	822331	812487	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484
WTC11_00045572	chr19	-	1501	3	FSM	ENSG00000129951.19	ENST00000519502.2	782	3	-324	-395	-324	395	multi-exon	FALSE	canonical	3	364	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACTGGAGCTGGGGTC	NA	False	NA	NA	False	NA	NA	NA	822279	814807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_815328_815665_815852_821484
WTC11_00045573	chr19	-	1763	9	NNC	ENSG00000198858.10	novel	1803	8	NA	NA	0	46814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.935428716549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTTGCTTTGAGAGC	-906624	True	NA	NA	False	NA	NA	NA	913151	849688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_849718_896503_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
WTC11_00045574	chr19	-	1768	9	NNC	ENSG00000198858.10	novel	1803	8	NA	NA	0	46814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.935428716549	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTTGCTTTGAGAGC	-906630	True	NA	NA	False	NA	NA	NA	913157	849688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_849719_896505_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
WTC11_00045575	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	287	junction_5	65.1152823843988	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-885233	True	NA	NA	False	NA	NA	NA	893218	867629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
WTC11_00045577	chr19	-	2820	14	NIC	ENSG00000175221.16	novel	2892	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_6	125.446516102947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-893147	False	NA	-15	True	AATAAA	-16	NA	893158	867962	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
WTC11_00045578	chr19	-	2892	16	FSM	ENSG00000175221.16	ENST00000325464.6	2892	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	123.058504604743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-885202	True	NA	-15	True	AATAAA	-16	NA	893187	867962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_868252_868415_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
WTC11_00045579	chr19	-	1628	9	FSM	ENSG00000175221.16	ENST00000592943.5	1628	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	136.008271807269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAACACACTGCAGGC	-891135	False	54	NA	False	NA	NA	NA	891148	873535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_873583_875243_875455_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962
WTC11_00045580	chr19	-	927	4	FSM	ENSG00000175221.16	ENST00000592373.1	927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	236.923334998194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCGCCATCACCCACC	-893147	False	NA	NA	False	NA	NA	NA	893158	885821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_886202_890136_890424_890962_891150_893085
WTC11_00045581	chr19	-	1802	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	1	0	0	multi-exon	FALSE	canonical	3	517	junction_7	51.5664817572067	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	-906692	True	NA	-8	True	AATAAA	-16	NA	913219	896503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
WTC11_00045582	chr19	-	1746	8	FSM	ENSG00000198858.10	ENST00000587975.2	1765	8	19	0	-7	0	multi-exon	FALSE	canonical	3	5	junction_7	228.536783088609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	-906699	True	NA	-8	True	AATAAA	-16	NA	913226	896503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902068_913086
WTC11_00045583	chr19	-	1684	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	19	1	-7	0	multi-exon	FALSE	canonical	3	28	junction_5	231.759034343863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	-906699	True	NA	-8	True	AATAAA	-16	NA	913226	896503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
WTC11_00045584	chr19	-	926	8	FSM	ENSG00000198858.10	ENST00000591829.5	823	8	-103	0	-103	0	multi-exon	FALSE	canonical	3	48	junction_7	213.53344143774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGAAGGTCAGTAATC	NA	False	NA	NA	False	NA	NA	NA	902513	897518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_902241
WTC11_00045586	chr19	-	601	2	FSM	ENSG00000198858.10	ENST00000589445.1	705	2	0	104	0	-104	multi-exon	FALSE	canonical	3	517	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCCCAAATGCCACCCC	-906624	True	NA	NA	False	GATAAA	-41	NA	913151	901594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_902131_913086
WTC11_00045587	chr19	-	2714	12	NNC	ENSG00000182087.14	novel	2687	11	NA	NA	0	39157	intron_retention	FALSE	non_canonical	0	0	junction_1	368.817296702727	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTTACTTATGTTCTT	-1006114	True	NA	NA	False	AAAAAG	-8	NA	1021115	970490	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_970526_1009652_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
WTC11_00045589	chr19	-	3039	11	NNC	ENSG00000182087.14	novel	2687	11	NA	NA	17	0	intron_retention	FALSE	canonical	2	23	junction_10	358.720002230152	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021088	False	NA	-31	True	AATAAA	-17	NA	1021098	1009652	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020394
WTC11_00045591	chr19	-	2687	11	FSM	ENSG00000182087.14	ENST00000356663.8	2687	11	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_4	152.58731926343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1006122	True	NA	-31	True	AATAAA	-17	NA	1021123	1009652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
WTC11_00045598	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3087	junction_2	289.115611364544	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-1056039	True	NA	-23	True	AATAAA	-22	NA	1095375	1086573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
WTC11_00045599	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_1	1205.96107833088	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-1056044	True	NA	NA	False	NA	NA	NA	1095380	1087644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
WTC11_00045601	chr19	-	2444	7	FSM	ENSG00000099817.12	ENST00000586817.5	2441	7	0	-3	0	-1	multi-exon	FALSE	canonical	3	3087	junction_2	215.680898551541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCCGACTAACAAGGTT	-1056039	True	NA	NA	False	AATAAA	-18	NA	1095375	1088163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903
WTC11_00045604	chr19	-	4915	32	FSM	ENSG00000064932.16	ENST00000361757.8	4906	32	0	-9	0	8	multi-exon	FALSE	canonical	3	39	junction_23	9.99479573214817	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTCAGCCTGTGGG	-1171471	True	NA	2	True	AATATA	-28	NA	1174268	1107628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1147308_1147421_1149368_1149443_1154183_1154403_1174171
WTC11_00045606	chr19	-	3303	10	FSM	ENSG00000099625.14	ENST00000650044.2	3281	10	-22	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	12.5707872210942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	-1235983	True	NA	-5	True	TATAAA	-14	NA	1238027	1228286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1230143_1231100_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235500_1235566_1235778_1235919_1235995_1236122_1237755
WTC11_00045607	chr19	-	3357	11	FSM	ENSG00000099625.14	ENST00000648750.1	3357	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	22.6982378170641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	-1235983	True	NA	-5	True	TATAAA	-14	NA	1238027	1228286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1230143_1231100_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235336_1235391_1235500_1235566_1235778_1235919_1235995_1236122_1237755
WTC11_00045608	chr19	-	4261	9	FSM	ENSG00000099625.14	ENST00000590083.5	4261	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	13.2664991614216	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	-1235983	True	NA	-5	True	TATAAA	-14	NA	1238027	1228286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235500_1235566_1235778_1235919_1235995_1236122_1237755
WTC11_00045610	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	27.7171427098826	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-1397436	True	NA	58	True	NA	NA	NA	1401542	1397025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
WTC11_00045611	chr19	-	520	4	FSM	ENSG00000130005.13	ENST00000640164.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	34.8361242901037	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCCCTGGTGACCAAAGG	-1399734	False	NA	NA	False	NA	NA	NA	1399747	1397382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523
WTC11_00045612	chr19	-	1768	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	0	1	0	-1	multi-exon	FALSE	canonical	3	378	junction_2	17.7816619020833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTGTGATTCTTT	-1397464	True	NA	-2	True	NA	NA	NA	1401570	1397811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
WTC11_00045613	chr19	-	1027	1	FSM	ENSG00000267317.2	ENST00000591252.2	911	1	-117	1	-117	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGTGCAGTAGCATGA	NA	False	NA	-5	True	AATAAA	-34	NA	1458697	1457670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1457700_1458700
WTC11_00045614	chr19	-	2465	2	FSM	ENSG00000119559.17	ENST00000436106.3	2403	2	-63	1	0	-1	multi-exon	FALSE	canonical	3	502	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGACGGTGTCGTCCTTA	-1472659	True	NA	-1	True	ATTAAA	-17	NA	1479181	1473201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773
WTC11_00045615	chr19	-	2233	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	-968	0	1	multi-exon	FALSE	canonical	3	51	junction_2	225.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGTGTCGTCCTTACG	-1472659	True	NA	1	True	ATTAAA	-19	NA	1479181	1473199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479139
WTC11_00045616	chr19	-	2427	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	-185	1	-181	-1	multi-exon	FALSE	canonical	3	354	junction_2	74	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGACGGTGTCGTCCTTA	-1479304	False	NA	-1	True	ATTAAA	-17	NA	1479400	1473201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479162
WTC11_00045617	chr19	-	2318	1	FSM	ENSG00000119559.17	ENST00000592486.1	2314	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	-1476389	False	NA	-6	True	CATAAA	-20	NA	1476485	1474167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1474200_1476500
WTC11_00045619	chr19	-	2257	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	2	-972	0	-1	multi-exon	FALSE	canonical	3	87	junction_2	207.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGACGGTGTCGTCCTTA	-1472659	True	NA	-1	True	ATTAAA	-17	NA	1479181	1473201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479113
WTC11_00045622	chr19	-	448	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	38	-129	0	129	multi-exon	FALSE	canonical	3	23	junction_1	165.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACAGTGCGAGACTGT	-1472659	True	NA	NA	False	NA	NA	NA	1479181	1478283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1478581_1478773_1478906_1479162
WTC11_00045623	chr19	-	545	2	FSM	ENSG00000115257.15	ENST00000586002.3	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGGAGGGTCCTCACCC	-1484114	False	NA	NA	False	NA	NA	NA	1484127	1483497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1483942_1484026
WTC11_00045624	chr19	-	440	4	NNC	ENSG00000127540.12	novel	533	4	NA	NA	0	66573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2509.95258919367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGGCTGACGACGTC	-1586556	True	NA	NA	False	NA	NA	NA	1605443	1530595	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1598050_1598216_1599411_1599561_1605359
WTC11_00045625	chr19	-	557	4	NNC	ENSG00000127540.12	novel	533	4	NA	NA	-85	66573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2509.95258919367	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGGCTGACGACGTC	-1605464	False	61	NA	False	NA	NA	NA	1605558	1530595	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1598048_1598216_1599411_1599561_1605359
WTC11_00045626	chr19	-	3327	7	NNC	ENSG00000071564.17	novel	4735	19	NA	NA	0	78694	intron_retention	TRUE	non_canonical	0	0	junction_1	448.139363244169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGGCTGACGACGTC	-1619792	False	NA	NA	False	NA	NA	NA	1619853	1530595	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1609293_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779
WTC11_00045627	chr19	-	2972	3	FSM	ENSG00000181588.17	ENST00000605173.2	2132	3	-836	-4	-41	4	multi-exon	FALSE	non_canonical	1	5	junction_1	3.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTTCAGCGTGGTGTGG	-1566641	True	NA	0	True	AATAAA	-24	NA	1568366	1554667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1555390_1555576_1556924_1567463
WTC11_00045628	chr19	-	3118	2	FSM	ENSG00000181588.17	ENST00000402693.5	3114	2	0	-4	0	4	multi-exon	FALSE	canonical	3	12	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTTCAGCGTGGTGTGG	-1566600	True	NA	0	True	AATAAA	-24	NA	1568325	1554667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1556924_1567463
WTC11_00045629	chr19	-	5538	7	FSM	ENSG00000071655.18	ENST00000156825.5	5518	7	0	-20	0	20	multi-exon	FALSE	canonical	3	511	junction_6	63.9003129882789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACAGGATTCTCCCT	-1589058	True	NA	19	True	AATAAA	-37	NA	1592801	1573575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
WTC11_00045630	chr19	-	5690	7	FSM	ENSG00000071655.18	ENST00000434436.8	5678	7	8	-20	8	20	multi-exon	FALSE	canonical	3	109	junction_6	209.478519185142	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACAGGATTCTCCCT	-1589114	True	NA	19	True	AATAAA	-37	NA	1592857	1573575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592521
WTC11_00045632	chr19	-	2782	5	FSM	ENSG00000071655.18	ENST00000590550.6	2782	5	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_3	32.8129166640212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGAGCTTCTGTCTTTG	-1585474	False	NA	-6	True	NA	NA	NA	1585530	1576639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054
WTC11_00045637	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	5127	junction_2	187.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-1586575	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1598216_1599411_1599561_1605359
WTC11_00045641	chr19	-	1765	5	FSM	ENSG00000071564.17	ENST00000592628.5	1751	5	0	-14	0	11	multi-exon	FALSE	canonical	3	133	junction_1	480.74388971676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTCTTTCTGGTGTCAC	-1619074	False	18	6	True	AATAAA	-33	NA	1619135	1609278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110
WTC11_00045642	chr19	-	2708	5	FSM	ENSG00000071564.17	ENST00000593064.5	2694	5	0	-14	0	11	multi-exon	FALSE	canonical	3	320	junction_1	401.802812334608	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTCTTTCTGGTGTCAC	-1619148	False	NA	6	True	AATAAA	-33	NA	1619209	1609278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110
WTC11_00045644	chr19	-	4431	18	ISM	ENSG00000071564.17	ENST00000262965.12	4735	19	2328	-12	0	10	3prime_fragment	FALSE	canonical	3	878	junction_14	119.25895757526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGTTCTTTCTGGTGTCA	-1650224	False	NA	5	True	AATAAA	-32	NA	1650287	1609279	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176
WTC11_00045645	chr19	-	2354	20	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	163	junction_1	302.560705659903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGTTCTTTCTGGTGTCA	-1652266	False	NA	5	True	AATAAA	-32	NA	1652329	1609279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00045646	chr19	-	4299	17	FSM	ENSG00000071564.17	ENST00000344749.9	4289	17	0	-10	0	10	multi-exon	FALSE	canonical	3	60	junction_2	401.465786018871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGTTCTTTCTGGTGTCA	-1652266	False	NA	5	True	AATAAA	-32	NA	1652329	1609279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611850_1612206_1612434_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1646354_1646428_1650176_1650288_1652299
WTC11_00045647	chr19	-	2706	20	NIC	ENSG00000071564.17	novel	3585	20	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	332.498132792125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGTTCTTTCTGGTGTCA	-1642913	True	NA	5	True	AATAAA	-32	NA	1652591	1609279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1631950_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00045649	chr19	-	4405	20	FSM	ENSG00000071564.17	ENST00000588136.7	4392	20	0	-13	0	11	multi-exon	TRUE	canonical	3	60	junction_3	351.180991288907	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTCTTTCTGGTGTCAC	-1642937	True	NA	6	True	AATAAA	-33	NA	1652615	1609278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611370_1611703_1611850_1612206_1612434_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00045650	chr19	-	4748	19	FSM	ENSG00000071564.17	ENST00000262965.12	4735	19	0	-13	0	11	multi-exon	FALSE	canonical	3	732	junction_18	141.102110386612	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTCTTTCTGGTGTCAC	-1642937	True	NA	6	True	AATAAA	-33	NA	1652615	1609278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00045653	chr19	-	1268	8	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	310.159142824375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTCTCTCGCTATT	-1620985	False	NA	-37	True	TATAAA	-2	NA	1621046	1611055	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967
WTC11_00045656	chr19	-	4334	20	NIC	ENSG00000071564.17	novel	4392	20	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	213	junction_6	281.708371633147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCAGTCCCCGGGT	-1642875	True	NA	-9	True	AATAAA	-18	NA	1652553	1609293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00045663	chr19	-	670	4	NNC	ENSG00000071564.17	novel	4078	19	NA	NA	12	-2753	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	430.729613562848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTAGGGGCCAGACT	-1642901	True	NA	-4	True	AATAAA	-14	NA	1652579	1634803	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1635010_1646354_1646428_1650176_1650288_1652299
WTC11_00045664	chr19	-	2452	12	FSM	ENSG00000079313.15	ENST00000643515.1	1894	12	164	-722	164	0	multi-exon	FALSE	canonical	3	105	junction_11	14.8835701750966	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGGTCTTGGT	-1821865	False	NA	-5	True	AATAAA	-18	NA	1821880	1815247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518
WTC11_00045665	chr19	-	4611	16	FSM	ENSG00000079313.15	ENST00000170168.9	4609	16	0	-2	0	2	multi-exon	FALSE	canonical	3	90	junction_14	21.4563122025509	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTGGTCTTGGTCT	-1846387	True	NA	-3	True	AATAAA	-20	NA	1848483	1815245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518_1821683_1823571_1823786_1825838_1825944_1826877_1828632_1848201
WTC11_00045666	chr19	-	4785	17	NIC	ENSG00000079313.15	novel	4609	16	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_15	47.2848746958264	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGGTCTTGGT	-1846402	True	NA	-5	True	AATAAA	-18	NA	1848498	1815247	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518_1821683_1823571_1823786_1825838_1825944_1826877_1828632_1830705_1830867_1848201
WTC11_00045667	chr19	-	1271	10	FSM	ENSG00000079313.15	ENST00000590936.5	1271	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	45.5674781146422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCCGAGGCAGCCCA	-1819948	False	NA	NA	False	AATAAA	-17	NA	1819963	1815969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817459_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933
WTC11_00045668	chr19	-	544	2	FSM	ENSG00000079313.15	ENST00000586291.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGAGAAGACGCCAAGACCA	NA	False	NA	NA	False	NA	NA	NA	1816765	1816093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816570_1816697
WTC11_00045670	chr19	-	718	6	FSM	ENSG00000079313.15	ENST00000586343.2	718	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	54.17896270694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCCTCTTCAGGCCG	-1821552	False	NA	NA	False	NA	NA	NA	1821567	1818557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1818596_1818705_1818844_1819017_1819132_1819933_1820181_1820263_1820396_1821518
WTC11_00045672	chr19	-	3066	2	FSM	ENSG00000129911.9	ENST00000250916.6	2901	2	-161	-4	-161	4	multi-exon	FALSE	canonical	3	194	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTGTGTGGTCTCTCC	-1863711	False	NA	3	True	ATTAAA	-26	NA	1863740	1852394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1854761_1863040
WTC11_00045673	chr19	-	2409	2	FSM	ENSG00000129911.9	ENST00000592313.1	508	2	18	-1919	18	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGCGTGTGTGTGGTCT	-1862811	False	NA	-1	True	ATTAAA	-22	NA	1862840	1852398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1854761_1862793
WTC11_00045675	chr19	-	1577	6	NNC	ENSG00000129968.17	novel	1781	6	NA	NA	0	8348	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	217.522780416213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAATCTGGGTTTGCCT	-1883061	True	NA	NA	False	NA	NA	NA	1885496	1868461	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1868499_1876975_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
WTC11_00045676	chr19	-	1317	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	-29	11	-29	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTTATCTTCTTGG	-1873763	False	2435	-10	True	TATAAA	-22	NA	1876198	1874881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1874900_1876200
WTC11_00045677	chr19	-	1706	5	FSM	ENSG00000129968.17	ENST00000292577.12	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	27.7702628723604	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	-1883061	True	NA	NA	False	NA	NA	NA	1885496	1876809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
WTC11_00045678	chr19	-	5426	3	FSM	ENSG00000129968.17	ENST00000588598.5	5425	3	0	-1	0	0	multi-exon	FALSE	canonical	3	552	junction_1	14	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGCTCTCCTTCCTTTC	-1881167	False	NA	-15	True	ATTAAA	-15	NA	1883602	1876975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1880116_1881234
WTC11_00045679	chr19	-	4647	4	FSM	ENSG00000129968.17	ENST00000591351.5	4647	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	261.408152555008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTGCTCTCCTTCCTTT	-1881365	False	NA	-16	True	ATTAAA	-14	NA	1883800	1876976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1877688_1878663_1880116_1881234
WTC11_00045681	chr19	-	2763	3	FSM	ENSG00000133243.10	ENST00000592895.5	2763	3	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	9.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTTTGCTCCCCTTCA	-1988554	False	NA	-19	True	AATAAA	-28	NA	1988569	1985437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1986650_1986829_1986977_1987165
WTC11_00045683	chr19	-	2639	9	FSM	ENSG00000133243.10	ENST00000255608.9	2629	9	0	-10	0	0	multi-exon	TRUE	canonical	3	463	junction_8	39.493472561931	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTTTGCTCCCCTTCA	-2014237	True	NA	-19	True	AATAAA	-28	NA	2015714	1985437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2015296
WTC11_00045684	chr19	-	2562	11	NIC	ENSG00000133243.10	novel	2629	9	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	232.073458198046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	-2034842	False	NA	-29	True	AATAAA	-18	NA	2034856	1985447	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2017182_2017301_2028707_2028835_2034750
WTC11_00045689	chr19	-	865	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	4	6	4	0	multi-exon	FALSE	canonical	3	170	junction_1	168.859573479135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2033059	False	9077	-9	True	AATAAA	-16	NA	2042136	2037470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
WTC11_00045690	chr19	-	1738	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	6	0	0	multi-exon	FALSE	canonical	3	170	junction_1	100.410695109175	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2042147	True	NA	-9	True	AATAAA	-16	NA	2051224	2037470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
WTC11_00045691	chr19	-	3785	14	FSM	ENSG00000099875.16	ENST00000250896.9	3785	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_11	70.5336379526835	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2042167	True	NA	-9	True	AATAAA	-16	NA	2051244	2037470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
WTC11_00045692	chr19	-	4093	4	FSM	ENSG00000099875.16	ENST00000587416.5	4093	4	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	39.7184535896799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCCTGAGTTTTAG	-2033599	False	NA	-11	True	AATAAA	-14	NA	2042676	2037472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2041205_2041839_2042035_2042426_2042523_2042606
WTC11_00045695	chr19	-	870	7	FSM	ENSG00000099875.16	ENST00000585667.1	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	35.2798337108704	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCGCAGGGGTGCTCG	-2034455	False	NA	NA	False	NA	NA	NA	2043532	2040131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042871_2043123_2043198_2043502
WTC11_00045698	chr19	-	3391	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	-4	0	4	multi-exon	FALSE	canonical	3	36	junction_4	8.25757228245687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCGTTTTCCTGCCAG	-2095581	True	NA	-9	True	AATAAA	-27	NA	2096326	2071031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
WTC11_00045699	chr19	-	5072	32	FSM	ENSG00000065000.19	ENST00000643116.3	5065	32	0	-7	0	7	multi-exon	FALSE	canonical	3	94	junction_9	62.8009590520431	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGGCCTGGGTCA	-2133628	True	NA	0	True	AATAAA	-29	NA	2151566	2100980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112968_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
WTC11_00045700	chr19	-	3284	5	FSM	ENSG00000065000.19	ENST00000585652.5	4433	5	1163	-14	-154	7	multi-exon	FALSE	canonical	3	359	junction_2	25.8553669476958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGGCCTGGGTCA	-2111650	False	NA	0	True	AATAAA	-29	NA	2111660	2100980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109959_2110135_2110225_2110706
WTC11_00045701	chr19	-	4016	25	FSM	ENSG00000065000.19	ENST00000644728.1	4015	25	0	-1	0	0	multi-exon	FALSE	canonical	3	250	junction_9	51.2489667917532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCACATGGGTCTTCTG	-2129040	False	47	-14	True	AATAAA	-15	NA	2129121	2100994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089
WTC11_00045702	chr19	-	5022	32	NIC	ENSG00000065000.19	novel	5065	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_9	49.3187091035226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCACATGGGTCTTCTG	-2133628	True	NA	-14	True	AATAAA	-15	NA	2151566	2100994	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
WTC11_00045709	chr19	-	1180	7	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	0	86853	intron_retention	FALSE	non_canonical	0	0	junction_1	626.443045207534	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCAGGCATGGTGGCAC	-2216421	True	NA	NA	False	NA	NA	NA	2236263	2143230	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2143259_2233152_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00045710	chr19	-	1590	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	-279	0	279	multi-exon	FALSE	canonical	3	1542	junction_4	87.0660668687865	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGACTTTGCCGATGT	-2216484	True	NA	NA	False	NA	NA	NA	2236326	2232869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00045711	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	698.494273419618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216452	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
WTC11_00045712	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_5	78.1050574546873	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216487	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00045713	chr19	-	2858	3	FSM	ENSG00000104886.12	ENST00000588450.1	2858	3	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_2	115.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGGCGGTGAAGTGA	-2216421	True	NA	-6	True	AATAAA	-17	NA	2236263	2233153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2234062_2234149_2235991_2236154
WTC11_00045717	chr19	-	492	4	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	41466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2037.86969379519	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTGCAATGGTTCAA	-2301127	False	NA	NA	False	NA	NA	NA	2328477	2280053	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2280081_2321520_2321823_2324124_2324197_2328386
WTC11_00045718	chr19	-	1817	1	FSM	ENSG00000220008.3	ENST00000585527.1	2241	1	212	212	212	-212	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCAGGGCGGACCCTC	NA	False	NA	NA	False	NA	NA	NA	2291812	2289995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2290000_2291800
WTC11_00045719	chr19	-	591	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	-16	0	16	multi-exon	FALSE	canonical	3	3988	junction_2	303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	-2301236	True	NA	2	True	AATAAA	-32	NA	2328586	2321503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2328386
WTC11_00045720	chr19	-	1095	3	FSM	ENSG00000130332.15	ENST00000589532.5	539	3	-556	0	-556	0	multi-exon	FALSE	canonical	3	85	junction_2	2254.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2298112	False	NA	-15	True	AATAAA	-15	NA	2325462	2321520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2324741
WTC11_00045721	chr19	-	491	4	FSM	ENSG00000130332.15	ENST00000252622.15	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	2878	junction_3	710.554712882829	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301236	True	NA	-15	True	AATAAA	-15	NA	2328586	2321520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2328386_2328478_2328560
WTC11_00045722	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	1604.88566570955	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301261	True	NA	-15	True	AATAAA	-15	NA	2328611	2321520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
WTC11_00045724	chr19	-	718	4	NNC	ENSG00000099800.8	novel	1664	3	NA	NA	0	51380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2167.30190687766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2427473	False	NA	NA	False	AAAAAG	-4	NA	2427538	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374285_2426562_2427047_2427255_2427325_2427413
WTC11_00045725	chr19	-	717	4	NNC	ENSG00000099800.8	novel	631	3	NA	NA	0	51380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2167.30190687766	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2427473	False	NA	NA	False	AAAAAG	-4	NA	2427538	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374286_2426564_2427047_2427255_2427325_2427413
WTC11_00045726	chr19	-	767	4	NNC	ENSG00000099800.8	novel	1664	3	NA	NA	0	51380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2167.30190687766	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2364412	True	NA	NA	False	AAAAAG	-4	NA	2427586	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374286_2426562_2427047_2427255_2427325_2427413
WTC11_00045727	chr19	-	4674	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.810177307119	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2434836	True	NA	NA	False	AAAAAG	-4	NA	2456959	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374285_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
WTC11_00045728	chr19	-	4671	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.810177307119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2434836	True	NA	NA	False	AAAAAG	-4	NA	2456959	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374282_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
WTC11_00045729	chr19	-	4673	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.810177307119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-2434836	True	NA	NA	False	AAAAAG	-4	NA	2456959	2374244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374284_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
WTC11_00045730	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4540	junction_1	56.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-2364412	True	NA	-2	True	AATAAA	-38	NA	2427586	2425624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2427047_2427255_2427325_2427413
WTC11_00045731	chr19	-	663	3	NNC	ENSG00000099800.8	novel	1664	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	101	junction_1	2276	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	-2427463	False	NA	-18	True	AATAAA	-16	NA	2427528	2426564	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2427044_2427255_2427325_2427413
WTC11_00045733	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_8	84.5139726332157	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-2434836	True	NA	-7	True	AATAAA	-14	NA	2456959	2428165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
WTC11_00045735	chr19	-	4194	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	-1	0	1	multi-exon	FALSE	canonical	3	132	junction_4	17.6776695296637	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTGGGCTGTTCC	-2700083	True	NA	-7	True	AATAAA	-21	NA	2702694	2511217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
WTC11_00045736	chr19	-	3381	2	FSM	ENSG00000176490.5	ENST00000323469.5	3378	2	0	-3	0	3	multi-exon	FALSE	canonical	3	80	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGCCCTGTCTCTGTGGT	-2720102	True	NA	2	True	AATAAA	-29	NA	2721372	2714563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2717876_2721303
WTC11_00045739	chr19	-	1658	1	FSM	ENSG00000261342.1	ENST00000567905.1	1585	1	-73	0	-73	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGTTGTCTGCATTT	-2729378	False	NA	-16	True	NA	NA	NA	2729400	2727742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2727700_2729400
WTC11_00045740	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	23.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-2734138	True	NA	-3	True	TTTAAA	-32	NA	2740017	2732523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2733486_2737047_2737380_2739944
WTC11_00045741	chr19	-	524	3	FSM	ENSG00000141873.11	ENST00000589363.5	524	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGGGGGGCGCGCGGGG	-2734138	True	NA	NA	False	NA	NA	NA	2740017	2733287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2733486_2737047_2737301_2739944
WTC11_00045742	chr19	-	3000	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	-46	-14	-46	14	multi-exon	FALSE	canonical	3	319	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCAGAATCGCCCTGGTT	-2734195	True	NA	-23	True	AATAAA	-32	NA	2740074	2734509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2737380_2739944
WTC11_00045743	chr19	-	4113	3	FSM	ENSG00000104969.11	ENST00000679132.1	4097	3	0	-16	0	4	multi-exon	FALSE	canonical	3	786	junction_2	20.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGTTGACCTTGG	-2760392	False	NA	0	True	AATAAA	-21	NA	2760461	2754710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692
WTC11_00045745	chr19	-	2866	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	-12	0	4	multi-exon	FALSE	canonical	3	78	junction_11	221.574941149613	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGTTGACCTTGG	-2769174	True	NA	0	True	AATAAA	-21	NA	2783241	2754710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
WTC11_00045746	chr19	-	2349	12	FSM	ENSG00000104969.11	ENST00000221566.7	2231	12	-114	-4	-25	4	multi-exon	FALSE	canonical	3	732	junction_11	47.7252813437369	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGTTGACCTTGG	-2769320	True	NA	0	True	AATAAA	-21	NA	2783387	2754710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
WTC11_00045749	chr19	-	3763	11	FSM	ENSG00000104969.11	ENST00000677731.1	3744	11	0	-19	0	4	multi-exon	FALSE	canonical	3	732	junction_10	48.3946278010277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGTTGACCTTGG	-2769260	True	NA	0	True	AATAAA	-21	NA	2783327	2754710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
WTC11_00045751	chr19	-	2328	12	FSM	ENSG00000104969.11	ENST00000678109.1	2316	12	0	-12	0	4	multi-exon	FALSE	canonical	3	29	junction_10	234.597633378465	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCGTGTTGACCTTGG	-2769295	True	NA	0	True	AATAAA	-21	NA	2783362	2754710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768964_2769092_2783232
WTC11_00045753	chr19	-	2002	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	38	0	38	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40870359029762	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-2944580	True	NA	0	True	AATAAA	-23	NA	2944933	2933217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
WTC11_00045754	chr19	-	2764	19	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_12	27.3087061593691	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-3028804	True	NA	-12	True	AATAAA	-15	NA	3029252	2997643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
WTC11_00045755	chr19	-	2818	20	FSM	ENSG00000065717.15	ENST00000262953.11	2812	20	0	-6	0	1	multi-exon	FALSE	canonical	3	17	junction_14	23.6426536000525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCGGGCTGGGGA	-3028832	True	NA	-6	True	AATAAA	-21	NA	3029280	2997637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
WTC11_00045756	chr19	-	2829	20	FSM	ENSG00000065717.15	ENST00000590536.5	2344	20	-275	-210	-8	1	multi-exon	FALSE	canonical	3	32	junction_14	22.265086391527	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCGGGCTGGGGA	-3028840	True	NA	-6	True	AATAAA	-21	NA	3029288	2997637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
WTC11_00045763	chr19	-	1799	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	-1	0	1	multi-exon	FALSE	canonical	3	2075	junction_2	205.538858180691	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTCCCTGCCTCTG	-3062276	True	NA	-9	True	AATAAA	-17	NA	3062495	3052908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
WTC11_00045764	chr19	-	1885	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_6	893.732249240976	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTCCCTGCCTCTG	-3063078	True	NA	-9	True	AATAAA	-17	NA	3063107	3052908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
WTC11_00045765	chr19	-	1751	3	FSM	ENSG00000104964.15	ENST00000590067.5	1100	3	-85	-566	-85	0	multi-exon	FALSE	canonical	3	2075	junction_2	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAGAAGTGGAAAATGC	-3056252	False	NA	-83	True	NA	NA	NA	3056281	3052982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663
WTC11_00045766	chr19	-	1698	6	FSM	ENSG00000104964.15	ENST00000586839.1	942	6	-148	-608	-148	0	multi-exon	FALSE	canonical	3	2075	junction_2	224.906202671247	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAGAAGTGGAAAATGC	-3061523	False	NA	-83	True	NA	NA	NA	3061552	3052982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159
WTC11_00045767	chr19	-	1666	6	FSM	ENSG00000104964.15	ENST00000586742.5	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	975.359338910537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAGAAGTGGAAAATGC	-3062854	False	NA	-83	True	NA	NA	NA	3062883	3052982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
WTC11_00045768	chr19	-	483	3	FSM	ENSG00000104964.15	ENST00000585782.1	505	3	0	22	0	-22	multi-exon	FALSE	canonical	3	2324	junction_2	97	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGACCGGCCCTGCC	-3062248	False	NA	NA	False	NA	NA	NA	3062277	3057461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3057743_3061159_3061258_3062173
WTC11_00045769	chr19	-	986	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	44	282	41	139	multi-exon	FALSE	canonical	2	5	junction_3	11.4309521329882	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGGCAATCTGGTTTT	-3480459	False	NA	NA	False	ATTAAA	-4	NA	3480481	3474267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
WTC11_00045770	chr19	-	1754	5	FSM	ENSG00000129932.10	ENST00000672935.1	1757	5	0	3	0	0	multi-exon	FALSE	canonical	3	12	junction_4	117.821899492412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	-3498325	True	NA	-9	True	ATTAAA	-14	NA	3500637	3490823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500532
WTC11_00045771	chr19	-	1763	5	FSM	ENSG00000129932.10	ENST00000427575.6	1763	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	19.5639975465138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	-3498362	True	NA	-9	True	ATTAAA	-14	NA	3500674	3490823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500560
WTC11_00045772	chr19	-	856	3	FSM	ENSG00000129932.10	ENST00000673168.1	884	3	28	0	28	0	multi-exon	FALSE	canonical	3	254	junction_2	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCCTGACTGCTCCTCG	-3493727	False	NA	NA	False	NA	NA	NA	3494143	3491309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3491812_3492261_3492500_3494027
WTC11_00045774	chr19	-	994	1	FSM	ENSG00000161091.14	ENST00000585788.1	1769	1	764	11	764	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAACCAAACCAAACCCA	-3539267	False	NA	33	True	AATAAA	-10	NA	3539279	3538285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538300_3539300
WTC11_00045775	chr19	-	1014	5	FSM	ENSG00000161091.14	ENST00000398558.8	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	83.870063193013	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCAACAAACATCCA	-3546322	False	36	44	True	AATAAA	-21	NA	3546358	3538274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538757_3542775_3542978_3544808_3544940_3546073_3546169_3546254
WTC11_00045776	chr19	-	986	5	FSM	ENSG00000161091.14	ENST00000615073.4	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	57.3105574916175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	-3547328	False	NA	-47	True	AATAAA	-35	NA	3547364	3538260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271
WTC11_00045778	chr19	-	1697	10	NIC	ENSG00000161091.14	novel	777	7	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	44.6047110394584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGCCGCCACCGTGCTGG	-3554196	True	NA	NA	False	NA	NA	NA	3557586	3538662	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
WTC11_00045779	chr19	-	2137	10	FSM	ENSG00000161091.14	ENST00000355415.7	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	35.8095097376985	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGTCTGCCTG	-3554196	True	NA	-1	True	AATAAA	-13	NA	3557586	3544198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
WTC11_00045782	chr19	-	3604	10	FSM	ENSG00000105298.14	ENST00000429344.7	3583	10	0	-21	0	21	multi-exon	FALSE	canonical	3	125	junction_7	18.6534344634963	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGTAACGTGTCCGAC	-3623777	True	NA	1	True	AATAAA	-40	NA	3626790	3610623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
WTC11_00045783	chr19	-	2669	11	FSM	ENSG00000105298.14	ENST00000248420.9	2671	11	12	-10	12	5	multi-exon	FALSE	canonical	0	0	junction_1	47.4561903232866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTGCAGAAATGCAGAGA	-3623790	True	NA	-15	True	AATAAA	-24	NA	3626803	3610639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3610972_3611903_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
WTC11_00045784	chr19	-	2805	12	FSM	ENSG00000105298.14	ENST00000585942.5	2810	12	12	-7	12	5	multi-exon	TRUE	canonical	3	17	junction_1	49.8581458815287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTGCAGAAATGCAGAGA	-3623790	True	NA	-15	True	AATAAA	-24	NA	3626803	3610639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3610972_3611228_3611361_3611899_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
WTC11_00045785	chr19	-	1708	6	FSM	ENSG00000105298.14	ENST00000589321.5	1708	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	62.4198686317105	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCCTGCCCCAAGTGG	-3616178	False	NA	NA	False	NA	NA	NA	3619191	3611567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614385_3614590_3618874_3618990_3619079
WTC11_00045786	chr19	-	2216	8	FSM	ENSG00000105298.14	ENST00000587175.1	2216	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	20.9683921507529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCCTGCCCCAAGTGG	-3621018	False	NA	NA	False	NA	NA	NA	3621028	3611567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706
WTC11_00045787	chr19	-	4984	17	FSM	ENSG00000186111.11	ENST00000539785.5	2289	17	0	-2695	0	2	multi-exon	FALSE	canonical	3	79	junction_1	26.3503291013604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTTTGCCTTTCTGTG	-3696456	True	NA	34	True	AATAAA	-17	NA	3700465	3630180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3633170_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
WTC11_00045788	chr19	-	5071	18	FSM	ENSG00000186111.11	ENST00000335312.8	5069	18	0	-2	0	2	multi-exon	FALSE	canonical	3	62	junction_2	32.7200561754495	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTTTGCCTTTCTGTG	-3696459	True	NA	34	True	AATAAA	-17	NA	3700468	3630180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
WTC11_00045789	chr19	-	2933	17	FSM	ENSG00000186111.11	ENST00000589578.5	2933	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	43.0435371891066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGTCCAGGAGCTGCCCA	-3696381	False	NA	NA	False	NA	NA	NA	3700390	3636600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3637614_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
WTC11_00045790	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	15.0229823936527	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-3759527	True	NA	97	True	ATTAAA	-16	NA	3761692	3750771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
WTC11_00045791	chr19	-	1508	2	FSM	ENSG00000011132.12	ENST00000589934.1	725	2	0	-783	0	783	multi-exon	FALSE	canonical	3	125	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCTCACTGCAACTTCCG	-3759405	True	NA	NA	False	NA	NA	NA	3761570	3758828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3760302_3761535
WTC11_00045792	chr19	-	2105	14	FSM	ENSG00000007264.15	ENST00000310132.11	2098	14	0	-7	0	4	multi-exon	TRUE	canonical	3	178	junction_12	20.0897394989605	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTCTCTGTGTCC	-3784484	True	NA	3	True	GATAAA	-24	NA	3786381	3777965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
WTC11_00045793	chr19	-	1909	13	FSM	ENSG00000007264.15	ENST00000395040.6	1907	13	2	-4	2	1	multi-exon	FALSE	canonical	3	39	junction_12	53.6207748918271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGCCTGTGTGTCTCTGTG	-3784514	True	NA	0	True	GATAAA	-21	NA	3786411	3777968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3786168
WTC11_00045794	chr19	-	1859	13	NIC	ENSG00000007264.15	novel	2098	14	NA	NA	34	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	61.9668370089106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGACTCTAGGCGCCT	-3784450	True	NA	-13	True	GATAAA	-8	NA	3786347	3777981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3778423_3778508_3778596_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
WTC11_00045795	chr19	-	801	8	FSM	ENSG00000007264.15	ENST00000590493.5	801	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	77.0748377373893	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCGCCCGCAACATCCT	-3782255	False	NA	NA	False	NA	NA	NA	3784152	3779132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783298_3783813_3784034_3784123
WTC11_00045796	chr19	-	741	6	FSM	ENSG00000007264.15	ENST00000587180.1	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	16.0922341519131	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGAGTACCTGGGGCAA	-3782676	False	NA	NA	False	NA	NA	NA	3784573	3779788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337
WTC11_00045797	chr19	-	2003	5	NIC	ENSG00000007264.15	novel	1907	13	NA	NA	-3	1434	intron_retention	FALSE	canonical	3	39	junction_4	85.1205028180638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGACCCCATGTCTG	-3784388	True	NA	-13	True	NA	NA	NA	3786285	3782437	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3786168
WTC11_00045798	chr19	-	1033	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	-14	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	37	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866816	True	NA	0	True	AATAAA	-25	NA	3869029	3851804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3852615_3855401_3855560_3868964
WTC11_00045799	chr19	-	878	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	-8	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866819	True	NA	0	True	AATAAA	-25	NA	3869032	3851804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3852615_3868964
WTC11_00045801	chr19	-	3197	16	NNC	ENSG00000167658.16	novel	3158	15	NA	NA	0	85816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2127.14279936465	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCAATGGCTC	-3874955	True	NA	NA	False	NA	NA	NA	3985463	3890239	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3890279_3976055_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
WTC11_00045802	chr19	-	3196	16	NNC	ENSG00000167658.16	novel	3158	15	NA	NA	0	85816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2127.14279936465	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCAATGGCTC	-3874955	True	NA	NA	False	NA	NA	NA	3985463	3890239	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3890281_3976058_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
WTC11_00045803	chr19	-	2289	9	FSM	ENSG00000167657.14	ENST00000545797.7	2286	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	17	junction_8	95.1254927713912	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-3960462	True	NA	-1	True	AATAAA	-18	NA	3971102	3958452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3970920
WTC11_00045804	chr19	-	2684	3	FSM	ENSG00000167657.14	ENST00000595279.1	2058	3	-621	-5	-621	0	multi-exon	FALSE	canonical	3	264	junction_2	21	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-3951821	False	NA	-1	True	AATAAA	-18	NA	3962461	3958452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3959638_3960058_3960105_3961008
WTC11_00045805	chr19	-	2185	9	NIC	ENSG00000167657.14	novel	2286	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	258	junction_8	25.1532801041932	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-3960459	True	NA	-1	True	AATAAA	-18	NA	3971099	3958452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3971021
WTC11_00045806	chr19	-	671	4	FSM	ENSG00000167657.14	ENST00000596311.5	671	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	8.49836585598797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGACTTCGGCATCGCG	-3960483	True	NA	NA	False	AAAACA	-43	NA	3971123	3964321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3964374_3964630_3964992_3969673_3969830_3971021
WTC11_00045807	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6884	junction_14	759.65372414821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-3874955	True	NA	-15	True	AATAAA	-17	NA	3985463	3976055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
WTC11_00045808	chr19	-	218	2	FSM	ENSG00000167658.16	ENST00000596417.1	218	2	0	0	0	0	multi-exon	FALSE	canonical	3	7294	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGTACATGAAGGCGCG	-3868951	False	NA	NA	False	NA	NA	NA	3979459	3978085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3978173_3979328
WTC11_00045809	chr19	-	549	4	FSM	ENSG00000167658.16	ENST00000598436.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	7245	junction_2	173.043989269267	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGATGATCACCATCCAC	-3982518	False	NA	NA	False	NA	NA	NA	3982534	3980939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3980980_3981338_3981453_3981946_3982053_3982245
WTC11_00045810	chr19	-	6336	3	FSM	ENSG00000178951.9	ENST00000322357.9	6437	3	100	1	100	-1	multi-exon	FALSE	canonical	2	3	junction_2	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCGCCTCAGTCGCCT	-4066543	True	NA	-21	True	CATAAA	-38	NA	4066799	4043303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4048245_4053970_4055248_4066681
WTC11_00045811	chr19	-	2083	3	FSM	ENSG00000178951.9	ENST00000601588.1	2083	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	15.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAACAGAAACCCGAGA	-4065476	False	NA	-33	True	NA	NA	NA	4065732	4047741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4048245_4053970_4055248_4065429
WTC11_00045812	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_6	88.1558279412087	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-4107455	True	NA	-7	True	AAAAAG	-5	NA	4124122	4090320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
WTC11_00045813	chr19	-	2926	4	FSM	ENSG00000126934.15	ENST00000600584.5	2926	4	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	11.3431330181157	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGCGCCATCCTGCTTC	-4100560	False	NA	-10	True	AAAAAG	-2	NA	4100679	4090323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4090709_4094452_4095450_4097278_4097344_4099200
WTC11_00045814	chr19	-	314	5	FSM	ENSG00000126934.15	ENST00000599021.1	314	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	462.605866261983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGGGCTCCCTGCGT	-4100928	False	NA	NA	False	NA	NA	NA	4101047	4090596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4101018
WTC11_00045815	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	10.5482371096998	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180918	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
WTC11_00045816	chr19	-	1361	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	29.8272805777977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180902	True	NA	-4	True	AATAAA	-19	NA	4182547	4174108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
WTC11_00045817	chr19	-	1474	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	-1	0	0	multi-exon	FALSE	canonical	3	4	junction_6	24.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180920	True	NA	-4	True	AATAAA	-19	NA	4182565	4174108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
WTC11_00045818	chr19	-	843	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	-16	0	0	multi-exon	FALSE	canonical	2	3	junction_5	25.1925915035882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGTGCTTGGGGAG	-4180855	True	NA	NA	False	NA	NA	NA	4182500	4174619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
WTC11_00045827	chr19	-	1121	11	NIC	ENSG00000178078.12	novel	1508	13	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.4444922518653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338068	True	NA	-6	True	ATTAAA	-16	NA	4338782	4324042	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
WTC11_00045828	chr19	-	1186	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	32.2682455274762	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338073	True	NA	-6	True	ATTAAA	-16	NA	4338787	4324042	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
WTC11_00045829	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.2016371888825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338107	True	NA	-6	True	ATTAAA	-16	NA	4338821	4324042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
WTC11_00045830	chr19	-	1377	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_10	26.7907270441762	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGCTTGGCTT	-4338113	True	NA	-5	True	ATTAAA	-17	NA	4338827	4324041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
WTC11_00045834	chr19	-	2521	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	-5	0	5	multi-exon	FALSE	canonical	3	657	junction_6	45.1830296996506	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCGTCTTGGTGCAGG	-4391791	True	NA	-1	True	ATTAAA	-20	NA	4400547	4360364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
WTC11_00045835	chr19	-	2200	10	FSM	ENSG00000141985.9	ENST00000598564.5	2194	10	0	-6	0	5	multi-exon	FALSE	canonical	3	30	junction_6	223.683031912195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCGTCTTGGTGCAGG	-4391662	True	NA	-1	True	ATTAAA	-20	NA	4400418	4360364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364121_4365572_4365626_4366500_4366574_4366925_4366995_4400323
WTC11_00045838	chr19	-	1922	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	-7	0	0	multi-exon	FALSE	canonical	3	31	junction_10	10.9311481556148	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCCGTTGAAACCGTG	-4457528	True	NA	NA	False	AATAAA	-25	NA	4457794	4444998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
WTC11_00045839	chr19	-	629	2	FSM	ENSG00000167671.12	ENST00000593024.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCGTGCCTTCTGGCCC	-4448846	False	NA	NA	False	NA	NA	NA	4448870	4447549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4447626_4448317
WTC11_00045841	chr19	-	312	4	FSM	ENSG00000214456.8	ENST00000590350.3	887	4	0	575	0	-443	multi-exon	FALSE	canonical	1	1	junction_2	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGCCTGCAGGGGCCT	-4535162	False	NA	NA	False	NA	NA	NA	4535185	4529852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4529867_4531626_4531823_4534014_4534096_4535164
WTC11_00045842	chr19	-	2554	2	FSM	ENSG00000171236.10	ENST00000306390.7	2605	2	0	51	0	-51	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACAGAGTGAAACTG	-4540013	False	NA	NA	False	NA	NA	NA	4540036	4536452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4538952_4539981
WTC11_00045843	chr19	-	4031	17	FSM	ENSG00000167680.17	ENST00000676793.1	4021	17	0	-10	0	10	multi-exon	FALSE	canonical	3	56	junction_8	77.0003804779561	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGGCTCTGCTCTGC	-4580698	True	NA	3	True	AATAAA	-27	NA	4581776	4542582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4581462
WTC11_00045844	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_5	54.4301387100933	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	-4656128	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
WTC11_00045845	chr19	-	705	5	FSM	ENSG00000074842.8	ENST00000599630.1	713	5	0	8	0	-8	multi-exon	FALSE	canonical	3	777	junction_4	60.1602027922114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGGCTGTGTGCCAC	-4656148	True	NA	NA	False	NA	NA	NA	4670362	4659695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
WTC11_00045846	chr19	-	287	3	FSM	ENSG00000074842.8	ENST00000596031.1	335	3	0	48	0	-48	multi-exon	FALSE	canonical	3	863	junction_2	20.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTGGGGCAGCTGTGA	-4654482	False	NA	NA	False	NA	NA	NA	4668696	4660627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4660751_4664875_4664938_4668594
WTC11_00045848	chr19	-	4179	22	NIC	ENSG00000142002.18	novel	4273	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.4738902668993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGAGGTTCCTTCTA	-4720612	True	NA	-1	True	ATTAAA	-24	NA	4723826	4675223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4676576_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
WTC11_00045849	chr19	-	4270	22	FSM	ENSG00000142002.18	ENST00000262960.14	4273	22	8	-5	1	2	multi-exon	TRUE	canonical	3	86	junction_4	24.7546692725565	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGGTTCCTTCTAAG	-4720620	True	NA	1	True	ATTAAA	-26	NA	4723834	4675221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
WTC11_00045850	chr19	-	4257	19	FSM	ENSG00000142002.18	ENST00000597145.5	4257	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	43.3648033875343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGGGGTGCCTAAAT	-4711006	False	NA	NA	False	AATAAA	-18	NA	4714220	4675763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683189_4683325_4683476_4683630_4684662_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080
WTC11_00045855	chr19	-	2199	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	-174	0	174	multi-exon	FALSE	canonical	3	109	junction_2	14.4997605344211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTTGGGACCTTCTA	-4720536	True	NA	-4	True	AATAAA	-15	NA	4723750	4694142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
WTC11_00045856	chr19	-	2084	12	FSM	ENSG00000142002.18	ENST00000601764.5	1909	12	0	-175	0	174	multi-exon	FALSE	canonical	1	5	junction_1	42.4378982350866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTTGGGACCTTCTA	-4720599	True	NA	-4	True	AATAAA	-15	NA	4723813	4694142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4694824_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
WTC11_00045859	chr19	-	2236	8	FSM	ENSG00000105355.9	ENST00000221957.9	2232	8	0	-4	0	4	multi-exon	FALSE	canonical	3	625	junction_7	55.6417109729742	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATGTGTGTACGTGTGT	-4860135	True	NA	-12	True	AATAAA	-22	NA	4867667	4838336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
WTC11_00045860	chr19	-	1701	5	FSM	ENSG00000105355.9	ENST00000589163.5	1699	5	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_2	311.376379964826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	-4852104	False	NA	-44	True	NA	NA	NA	4859636	4838368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847816_4847891_4852015_4852302_4859589
WTC11_00045861	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	250.443524938605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	-4860121	True	NA	-44	True	NA	NA	NA	4867653	4838368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
WTC11_00045862	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.291317323819	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	-4860162	True	NA	NA	False	NA	NA	NA	4867694	4839061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
WTC11_00045863	chr19	-	7658	33	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	-57	359	combination_of_known_junctions	TRUE	canonical	1	13	junction_14	32.4612599638015	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGAGCTGAGATCATG	-5327441	True	NA	NA	False	NA	NA	NA	5340869	5205148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5218786_5218799_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
WTC11_00045864	chr19	-	5993	32	FSM	ENSG00000105426.18	ENST00000588012.5	5993	32	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_14	32.9170748842999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTCCAATTCCAAAAC	-5284481	False	1682	NA	False	NA	NA	NA	5286163	5206536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5218786_5218799_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049
WTC11_00045866	chr19	-	672	4	ISM	ENSG00000105426.18	ENST00000262963.11	7356	38	35	67849	26	192	5prime_fragment	FALSE	canonical	3	98	junction_3	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCCTCCTGCTTTGTGT	-5327349	True	NA	-4	True	AATACA	-13	NA	5340777	5273356	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_5273584_5274198_5274345_5286049_5286235_5340663
WTC11_00045868	chr19	-	3648	3	FSM	ENSG00000223573.7	ENST00000448587.5	3733	3	0	85	0	-85	multi-exon	FALSE	canonical	1	2	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCAGGATCACCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	5568034	5558251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5561400_5562081_5562212_5567664
WTC11_00045869	chr19	-	279	1	FSM	ENSG00000233270.1	ENST00000435815.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	5576938	5576659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5576700_5576900
WTC11_00045870	chr19	-	3424	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	-247	-10	-247	10	multi-exon	FALSE	canonical	3	176	junction_14	43.774735864423	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGTGCACATGCGTGAGTC	-5622914	False	NA	-7	True	AATAAA	-25	NA	5623023	5586988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
WTC11_00045871	chr19	-	836	9	FSM	ENSG00000130254.12	ENST00000591123.5	836	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	79.1845155317629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAGCGTGAAAACCAC	-5616169	False	NA	NA	False	GATAAA	-16	NA	5616278	5598831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5612539_5612568_5613464_5613528_5616131
WTC11_00045873	chr19	-	697	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	-42	0	41	multi-exon	FALSE	canonical	3	25	junction_3	283.695063208525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGTGCCCAGAGCACC	-5680202	False	6282	35	True	NA	NA	NA	5680252	5678379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
WTC11_00045874	chr19	-	558	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	-42	0	41	multi-exon	FALSE	canonical	3	553	junction_3	37.4195433192633	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGTGCCCAGAGCACC	-5674234	True	NA	35	True	NA	NA	NA	5680516	5678379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
WTC11_00045875	chr19	-	773	2	FSM	ENSG00000174917.9	ENST00000590075.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCTTGAGAGGCTGA	-5674228	True	NA	NA	False	AATACA	-40	NA	5680510	5679043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5679764_5680457
WTC11_00045876	chr19	-	3092	18	FSM	ENSG00000196365.12	ENST00000360614.8	3092	18	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_16	109.366214427178	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCTTCCTCACCTGCT	-5709984	True	NA	-5	True	ATTAAA	-14	NA	5720146	5691833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711770_5712003_5713133_5713254_5714182_5714272_5719703
WTC11_00045880	chr19	-	1782	1	FSM	ENSG00000212123.4	ENST00000390672.2	1640	1	-147	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCTCCATGTCCACGT	-5781085	False	NA	-5	True	ATTAAA	-13	NA	5784746	5782964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5783000_5784700
WTC11_00045882	chr19	-	2038	13	FSM	ENSG00000141994.16	ENST00000309061.12	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	22.6562476053639	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787502	True	NA	-5	True	AATAAA	-17	NA	5791163	5785139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
WTC11_00045886	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	149	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871344	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5896576_5896904_5896998_5903611
WTC11_00045887	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2497	junction_1	209.19103443716	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871363	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
WTC11_00045888	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	1251.08979993444	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	-5871327	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
WTC11_00045890	chr19	-	3186	17	FSM	ENSG00000031823.14	ENST00000439268.6	3186	17	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_14	168.984825039854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-5970654	True	NA	-44	True	ATTAAA	-14	NA	5978108	5916138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
WTC11_00045891	chr19	-	3233	17	FSM	ENSG00000031823.14	ENST00000340578.10	3233	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	165.795384058182	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-5970686	True	NA	-44	True	ATTAAA	-14	NA	5978140	5916138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
WTC11_00045893	chr19	-	1784	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	-1	0	0	multi-exon	FALSE	canonical	3	240	junction_9	85.3759268698671	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGACTGGAGACCTCGT	-5970639	True	NA	-7	True	NA	NA	NA	5978093	5917321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
WTC11_00045894	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_9	75.7928756546418	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	-5970632	True	NA	-37	True	NA	NA	NA	5978086	5917351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
WTC11_00045895	chr19	-	818	10	FSM	ENSG00000031823.14	ENST00000592621.5	818	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	210.83326745717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGCCGGCCCCTCCT	-5977372	False	7454	NA	False	AAAAAG	-45	NA	5978079	5923193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5978060
WTC11_00045897	chr19	-	579	7	FSM	ENSG00000031823.14	ENST00000587263.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	211.102397480991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCAGTGGCTTCCGGTTG	-5970639	True	NA	NA	False	NA	NA	NA	5978093	5933473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5933480_5941620_5941708_5941798_5941836_5950716_5950873_5951392_5951597_5957917_5957974_5978060
WTC11_00045900	chr19	-	2712	8	ISM	ENSG00000087903.13	ENST00000359161.7	3595	18	41428	-354	422	1	3prime_fragment	FALSE	canonical	2	7	junction_7	6.23354977979184	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCCTGTCTTTCCGA	NA	False	NA	NA	False	AATACA	-19	NA	6007804	5993162	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_5994951_5995600_5995644_5997059_5997214_6001814_6002024_6002720_6002871_6004200_6004299_6007011_6007167_6007689
WTC11_00045901	chr19	-	1095	5	FSM	ENSG00000087903.13	ENST00000588021.5	1314	5	0	219	0	104	multi-exon	FALSE	canonical	3	9	junction_4	3.39116499156263	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTCCTGCGTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	6026699	6008084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6008225_6010135_6010252_6012985_6013106_6016089_6016272_6026162
WTC11_00045902	chr19	-	337	3	FSM	ENSG00000087903.13	ENST00000587321.1	337	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACACGCAGTACATGGC	-6110206	True	NA	NA	False	NA	NA	NA	6110480	6013038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6013106_6016089_6016272_6110392
WTC11_00045905	chr19	-	4539	12	FSM	ENSG00000130382.9	ENST00000252674.9	4532	12	0	-7	0	7	multi-exon	FALSE	canonical	3	31	junction_8	15.3342915019824	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGCCTGGTTCCTCCT	-6276072	True	NA	1	True	AATAAA	-24	NA	6279975	6210373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6217953_6218042_6222120_6222685_6226976_6227103_6230569_6230714_6262227_6262311_6270578_6270760_6279772
WTC11_00045906	chr19	-	3911	1	FSM	ENSG00000125650.5	ENST00000597721.1	3911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTGACCATGTG	-6379024	False	NA	-1	True	AATAAA	-19	NA	6379058	6375147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6375100_6379100
WTC11_00045907	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_10	33.6373634850031	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-6387515	True	NA	-36	True	AATAAA	-18	NA	6393164	6379571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
WTC11_00045908	chr19	-	762	6	FSM	ENSG00000125651.14	ENST00000594965.1	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_5	18.6397424874916	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTGAGCAGCGAGCAG	-6381704	True	NA	NA	False	AAAAAG	-17	NA	6381775	6380390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381616_6381696
WTC11_00045909	chr19	-	4278	19	FSM	ENSG00000088247.19	ENST00000600480.2	4276	19	0	-2	0	2	multi-exon	FALSE	canonical	3	261	junction_18	91.1124153023188	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGCCGCAGTTGTG	-6412346	True	NA	NA	False	AATAAA	-24	NA	6424811	6413099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
WTC11_00045910	chr19	-	2993	20	FSM	ENSG00000088247.19	ENST00000398148.7	2993	20	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_1	118.181090209485	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTGCGGGTGCTGTCT	-6412329	True	NA	30	True	AATAAA	-16	NA	6424794	6413347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
WTC11_00045914	chr19	-	892	5	FSM	ENSG00000125648.15	ENST00000598908.5	888	5	0	-4	0	2	multi-exon	TRUE	canonical	3	28	junction_3	159.93592466985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCAGGTTTTTTGTT	-6454651	False	NA	0	True	AATACA	-21	NA	6454670	6436076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6436465_6438446_6438535_6444150_6444302_6454322_6454476_6454558
WTC11_00045915	chr19	-	1627	9	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	169.321762851088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6456892	True	NA	-4	True	AATACA	-17	NA	6459757	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6436465_6444150_6444302_6452311_6452480_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00045916	chr19	-	1572	9	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	154.966125330667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6456897	True	NA	-4	True	AATACA	-17	NA	6459762	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6436465_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00045917	chr19	-	1840	11	NNC	ENSG00000125648.15	novel	2056	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	155.719491393981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6456905	True	NA	-4	True	AATACA	-17	NA	6459770	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6436469_6438446_6438535_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00045918	chr19	-	3277	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	83	junction_2	114.379849623961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTTTTTACTGAAAAG	-6456888	True	NA	-1	True	AATAAA	-18	NA	6459753	6440061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6442160_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00045919	chr19	-	3482	10	FSM	ENSG00000125648.15	ENST00000301454.9	3482	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	52.8877217424906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-6456927	True	NA	-3	True	AATAAA	-16	NA	6459792	6440063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00045924	chr19	-	2137	12	ISM	ENSG00000205744.10	ENST00000543576.5	2395	21	5581	-49	9	49	intron_retention	FALSE	canonical	3	15	junction_9	8.0842669365148	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTTTTTTCCTGG	-6475946	False	NA	NA	False	AATAAA	-17	NA	6476206	6467448	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475586_6475705
WTC11_00045925	chr19	-	860	3	FSM	ENSG00000205744.10	ENST00000591795.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCAGTCCTCAACAGCT	-6469391	False	NA	NA	False	NA	NA	NA	6469651	6467949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6468646_6468845_6468954_6469595
WTC11_00045926	chr19	-	2281	4	FSM	ENSG00000104833.12	ENST00000264071.7	2277	4	0	-4	0	4	multi-exon	FALSE	canonical	3	142	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCGAATCCCTCTTTCC	-6500557	True	NA	-8	True	AATAAA	-26	NA	6502309	6494314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155
WTC11_00045928	chr19	-	920	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	-9	0	9	multi-exon	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCGTGCATCTGTAATC	-6591060	True	NA	NA	False	ATTAAA	-24	NA	6591150	6585829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6586406_6590102_6590137_6590840
WTC11_00045929	chr19	-	375	3	FSM	ENSG00000125730.17	ENST00000598805.2	873	3	41	457	41	-457	multi-exon	FALSE	canonical	3	9	junction_2	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTTGGCCTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	6693042	6686745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6686903_6690628_6690728_6692923
WTC11_00045930	chr19	-	2048	18	FSM	ENSG00000125734.16	ENST00000264080.12	2034	18	-22	8	-22	-8	multi-exon	FALSE	canonical	3	152	junction_17	36.6453120157758	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACCGCTGCATGCA	-6737497	True	NA	NA	False	AATAAA	-7	NA	6737602	6729921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
WTC11_00045931	chr19	-	619	5	FSM	ENSG00000125734.16	ENST00000537722.8	619	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	122.539789456323	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6731949	False	NA	-4	True	NA	NA	NA	6732054	6730054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6732024
WTC11_00045934	chr19	-	1710	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	74.8574654821301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6735714	True	NA	-4	True	NA	NA	NA	6737539	6730054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6730243_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
WTC11_00045935	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	42.4832961271485	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	-6737155	False	1825	-35	True	NA	NA	NA	6737260	6730085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
WTC11_00045936	chr19	-	1825	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	65.2970852531761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6735744	True	NA	-4	True	NA	NA	NA	6737569	6730054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
WTC11_00045938	chr19	-	765	9	FSM	ENSG00000125734.16	ENST00000597298.5	765	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	90.25623247178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCCTCTGCAGGAAC	-6737212	False	NA	NA	False	NA	NA	NA	6737317	6733189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737267
WTC11_00045940	chr19	-	595	4	FSM	ENSG00000125734.16	ENST00000595620.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	57.1333722286915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGTGCTTCCGGTGTC	-6735724	True	NA	NA	False	AATGAA	-18	NA	6737549	6735373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6735705_6735907_6735959_6736591_6736712_6737456
WTC11_00045942	chr19	-	2276	10	FSM	ENSG00000125731.13	ENST00000245908.11	2281	10	0	5	0	0	multi-exon	FALSE	canonical	3	79	junction_6	29.0712194871343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765338	True	NA	-6	True	AATAAA	-17	NA	6767435	6752164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
WTC11_00045943	chr19	-	2013	8	FSM	ENSG00000125731.13	ENST00000437152.7	2013	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_6	49.5823372105965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765338	True	NA	-6	True	AATAAA	-17	NA	6767435	6752164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6752754_6753455_6753642_6754051_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6763679_6763817_6767386
WTC11_00045944	chr19	-	2405	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	38.6228998789802	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765444	True	NA	-6	True	AATAAA	-17	NA	6767541	6752164	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
WTC11_00045947	chr19	-	3272	1	ISM	ENSG00000171105.14	ENST00000341500.9	8954	21	178395	10	7622	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATACGCTTGTTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	7115536	7112264	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_7112300_7115500
WTC11_00045948	chr19	-	401	3	FSM	ENSG00000171105.14	ENST00000601099.1	570	3	169	0	169	0	multi-exon	FALSE	canonical	0	0	junction_1	2	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTGTGGATGGG	NA	False	NA	NA	False	NA	NA	NA	7122989	7120619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7120750_7122613_7122774_7122878
WTC11_00045949	chr19	-	1367	3	ISM	ENSG00000171105.14	ENST00000598216.1	2961	10	-568	32495	-20	-25043	5prime_fragment	FALSE	canonical	3	24	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGACTGGCGCTGTGTGA	-7292950	True	NA	NA	False	NA	NA	NA	7294434	7184465	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_7184638_7267344_7267897_7293791
WTC11_00045950	chr19	-	1084	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	-6	0	6	multi-exon	FALSE	canonical	3	36	junction_1	12.8646803302686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGGGTGAAGGTTATTA	-7488721	True	NA	1	True	ATTAAA	-22	NA	7489035	7476868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
WTC11_00045951	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_6	28.854038808381	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	-7623743	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
WTC11_00045953	chr19	-	749	3	FSM	ENSG00000076924.12	ENST00000600230.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	18	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCGTCCCAGCTGGCT	-7615495	False	NA	NA	False	NA	NA	NA	7621297	7620274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7620670_7620845_7621037_7621134
WTC11_00045954	chr19	-	4471	6	FSM	ENSG00000183248.12	ENST00000618550.5	4467	6	0	-4	0	4	multi-exon	FALSE	canonical	3	35	junction_1	31.2051277837473	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCTGTCACAGAGAGGAC	-7872505	True	NA	1	True	AATAAA	-26	NA	7874390	7868714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7869545_7869714_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
WTC11_00045955	chr19	-	492	1	FSM	ENSG00000269153.1	ENST00000600506.1	676	1	-81	265	-81	-265	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTGGTATCGTAGCAT	-7880185	False	NA	NA	False	NA	NA	NA	7880201	7879709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7879700_7880200
WTC11_00045956	chr19	-	1237	2	FSM	ENSG00000178531.6	ENST00000318978.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTAGCGTGCTGAGT	-7923215	True	NA	-36	True	AATAAA	-25	NA	7926135	7924490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7925559_7925966
WTC11_00045957	chr19	-	2234	1	FSM	ENSG00000104980.8	ENST00000599939.1	2227	1	-4	-3	-4	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAGTCTGAAGTGTCTTC	-7928927	False	NA	-6	True	AATAAA	-25	NA	7928948	7926714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7926700_7928900
WTC11_00045959	chr19	-	1819	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	-22	0	4	multi-exon	TRUE	canonical	2	7	junction_9	130.797128748642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTCTGAAGTGTCTTCT	-7938226	True	NA	-5	True	AATAAA	-26	NA	7943635	7926713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
WTC11_00045960	chr19	-	1847	13	FSM	ENSG00000104980.8	ENST00000270538.8	1843	13	0	-4	0	4	multi-exon	FALSE	canonical	3	402	junction_5	31.0817693976532	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTCTGAAGTGTCTTCT	-7938257	True	NA	-5	True	AATAAA	-26	NA	7943666	7926713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934239_7935064_7935146_7938026_7938198_7941101_7941198_7943606
WTC11_00045964	chr19	-	6054	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	124.802884582048	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-7997458	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
WTC11_00045965	chr19	-	856	6	FSM	ENSG00000066044.15	ENST00000593807.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	942.707080698984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAACACCAACAAGTGCAA	-7997476	True	NA	NA	False	NA	NA	NA	8005659	7963629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7963808_7973558_7973626_7973724_7973879_7981082_7981187_7991643_7991832_8005494
WTC11_00045967	chr19	-	9121	64	FSM	ENSG00000142449.13	ENST00000600128.6	9108	64	0	-13	0	13	multi-exon	TRUE	canonical	3	11	junction_60	24.0987616889497	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAAGTTCTTGAAGTAA	-8148011	True	NA	6	True	AATAAA	-29	NA	8149592	8065388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8145842_8145939_8146126_8146226_8147103_8147187_8147313_8147498_8149448
WTC11_00045968	chr19	-	9083	64	FSM	ENSG00000142449.13	ENST00000601739.5	9086	64	3	0	3	0	multi-exon	FALSE	canonical	3	6	junction_63	24.358941370498	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCTGCCCTTTGGCA	-8148856	False	NA	-8	True	AATAAA	-15	NA	8148866	8065402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8145842_8145939_8146126_8146226_8147103_8147187_8147313_8147498_8148746
WTC11_00045969	chr19	-	8455	61	NNC	ENSG00000142449.13	novel	562	5	NA	NA	209	3663	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_60	24.4306501482598	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCTCTGTTCACAGCC	-8148650	False	NA	0	True	ATTAAA	-28	NA	8148660	8071102	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8071343_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8147103_8147187_8147313_8147498_8148259
WTC11_00045972	chr19	-	1209	6	NNC	ENSG00000167775.11	novel	1253	5	NA	NA	0	26807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	728.612215104853	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGGCATGGCACAGTG	-8297459	True	NA	NA	False	NA	NA	NA	8308271	8275319	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275365_8302128_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
WTC11_00045973	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_3	857.850155265411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297538	True	NA	-1	True	ATTAAA	-17	NA	8308350	8302126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
WTC11_00045974	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_4	90.5189897203896	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297546	True	NA	-1	True	ATTAAA	-17	NA	8308358	8302126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
WTC11_00045977	chr19	-	746	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	-26	-151	-26	151	multi-exon	FALSE	canonical	3	24	junction_1	911.94147290273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATCACGAGGCAGT	-8309123	True	NA	-23	True	NA	NA	NA	8321401	8308616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
WTC11_00045979	chr19	-	702	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	-26	-96	-26	96	multi-exon	FALSE	canonical	3	2005	junction_2	83.9616314488681	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGGAAGGCAAAGGACAGT	-8309123	True	NA	NA	False	NA	NA	NA	8321401	8311187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
WTC11_00045980	chr19	-	2787	11	FSM	ENSG00000186994.12	ENST00000330915.7	2787	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	11.4297856497836	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTGTTTTGTTTGGGG	-8342911	True	NA	-2	True	AATAAA	-13	NA	8343262	8322583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8322923_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
WTC11_00045981	chr19	-	1031	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	-19	8	-19	-7	multi-exon	FALSE	canonical	3	16	junction_2	10	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAAGTGTTCTGAGGT	-8389989	True	NA	NA	False	AAAAAG	-22	NA	8390704	8374379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8374609_8376961_8377068_8390008
WTC11_00045982	chr19	-	530	1	FSM	ENSG00000279827.1	ENST00000623944.1	1028	1	486	12	486	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAAAACATTGTGTCT	NA	False	NA	-13	True	NA	NA	NA	8445111	8444581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8444600_8445100
WTC11_00045983	chr19	-	2307	8	FSM	ENSG00000133250.14	ENST00000393927.9	2307	8	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	38.1500795730307	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTAACCAGGAGAGGTG	-8509035	True	NA	NA	False	AATAAA	-17	NA	8514167	8509677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8510765_8510850_8511025_8511485_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
WTC11_00045986	chr19	-	512	5	FSM	ENSG00000133250.14	ENST00000593661.5	512	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	124.455564359333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGTGCATGCAGTGCGC	-8507267	False	NA	NA	False	NA	NA	NA	8512399	8510977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511025_8511485_8511537_8511616_8511961_8512074_8512132_8512386
WTC11_00045989	chr19	-	1194	6	FSM	ENSG00000133250.14	ENST00000255616.8	1178	6	-16	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	7.41350119714026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCACCTGCGCCTTC	-8509032	True	NA	0	True	AATACA	-19	NA	8514164	8511334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
WTC11_00045992	chr19	-	239	2	FSM	ENSG00000142347.19	ENST00000601502.1	466	2	0	227	0	-227	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCCCTGCCCCTACCCT	NA	False	NA	NA	False	NA	NA	NA	8545718	8544294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8544465_8545649
WTC11_00045993	chr19	-	533	5	FSM	ENSG00000142347.19	ENST00000598529.5	850	5	0	317	0	-74	multi-exon	FALSE	canonical	2	9	junction_2	2.91547594742265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACCGGCCTCTACTC	NA	False	NA	NA	False	NA	NA	NA	8554564	8551739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8551875_8552032_8552165_8553138_8553229_8553349_8553438_8554476
WTC11_00045995	chr19	-	7069	23	NIC	ENSG00000142303.14	novel	4251	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_9	6.08819478191026	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGGTGTGTGTGTGTCAG	-8610213	True	NA	0	True	AATAAA	-28	NA	8610680	8580239	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_8581003_8584894_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957_8592104_8592762_8595904_8596072_8596220_8596306_8596413_8596541_8596586_8596986_8597133_8597233_8597318_8600927_8601146_8603727_8603885_8605011_8605359_8605622_8605810_8610643
WTC11_00045996	chr19	-	447	4	FSM	ENSG00000142303.14	ENST00000596911.5	545	4	98	0	98	0	multi-exon	FALSE	canonical	3	10	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCCAGACCAGGTCCAGA	-8589491	False	NA	NA	False	NA	NA	NA	8589593	8586621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8586722_8586815_8586897_8589241_8589366_8589451
WTC11_00045997	chr19	-	799	7	FSM	ENSG00000142303.14	ENST00000593826.1	831	7	32	0	-10	0	multi-exon	FALSE	canonical	1	2	junction_4	5.3437398472938	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTAGCTGGGACCACC	-8592082	True	NA	NA	False	GGGGCT	-27	NA	8592184	8586655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957
WTC11_00045998	chr19	-	491	3	FSM	ENSG00000142303.14	ENST00000596236.5	472	3	0	-19	0	19	multi-exon	FALSE	canonical	3	9	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCGGGGAGACAGAGTA	-8592072	True	NA	NA	False	NA	NA	NA	8592174	8589781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8589992_8591799_8591864_8591957
WTC11_00045999	chr19	-	576	2	FSM	ENSG00000142303.14	ENST00000601872.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGGTGCATGGAGTGT	NA	False	NA	NA	False	NA	NA	NA	8596357	8595612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8595904_8596072
WTC11_00046001	chr19	-	2969	6	FSM	ENSG00000167785.9	ENST00000301475.1	3014	6	45	0	45	0	multi-exon	FALSE	canonical	3	9	junction_2	1.49666295470958	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAATGTATTTATTATA	-8822653	False	NA	0	True	AATAAA	-23	NA	8822844	8809705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8812064_8812560_8812644_8813126_8813223_8821179_8821307_8822002_8822092_8822628
WTC11_00046002	chr19	-	764	5	FSM	ENSG00000167785.9	ENST00000599938.5	780	5	16	0	6	0	multi-exon	FALSE	canonical	2	4	junction_4	2.27760839478607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCGTCCTGCTTCCCG	-8832107	True	NA	NA	False	GATAAA	-2	NA	8832298	8822707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8822725_8824081_8824418_8825001_8825109_8831317_8831402_8832078
WTC11_00046003	chr19	-	3561	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	0	-17	0	17	multi-exon	FALSE	canonical	3	15	junction_7	15.1726728034318	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCATTAGTGTTAGTGTA	-9433710	True	NA	5	True	AATAAA	-33	NA	9435573	9412411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
WTC11_00046005	chr19	-	3666	12	FSM	ENSG00000174652.20	ENST00000651268.1	3653	12	0	-13	0	0	multi-exon	FALSE	canonical	3	4	junction_5	20.4910784860305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433708	True	NA	-6	True	AATAAA	-16	NA	9435571	9412597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9433667_9433784_9434074_9434236_9434797_9434860_9435107_9435194_9435283
WTC11_00046008	chr19	-	390	3	FSM	ENSG00000198028.4	ENST00000585974.1	516	3	126	0	126	0	multi-exon	FALSE	canonical	3	21	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGTTTCTGTGTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	9469766	9468164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9468335_9469104_9469188_9469629
WTC11_00046009	chr19	-	430	5	ISM	ENSG00000198028.4	ENST00000301480.5	2815	10	8	6847	8	-5037	5prime_fragment	FALSE	canonical	3	19	junction_1	6.98212002188447	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCAAGGAGTTCTCC	-9498012	True	NA	NA	False	TTTAAA	-42	NA	9498608	9473201	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9473260_9474198_9474326_9475283_9475370_9498127_9498216_9498537
WTC11_00046010	chr19	-	1553	3	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	4714	85505	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	196.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCATGGTGGTGCAT	-9563018	False	NA	NA	False	NA	NA	NA	9563029	9474823	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9474849_9560336_9561627_9562791
WTC11_00046011	chr19	-	7098	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	6	0	6	0	multi-exon	FALSE	canonical	3	8	junction_7	8.17162836918577	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536314	True	NA	-3	True	AATAAA	-19	NA	9538639	9523222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
WTC11_00046012	chr19	-	7327	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	6	0	6	0	intron_retention	FALSE	canonical	3	24	junction_6	3.590109871423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536314	True	NA	-3	True	AATAAA	-19	NA	9538639	9523222	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
WTC11_00046015	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.0724477007517	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9576647	True	NA	-12	True	AATAAA	-17	NA	9584504	9560328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
WTC11_00046016	chr19	-	7177	6	FSM	ENSG00000197961.12	ENST00000586602.5	7177	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	32.127247003128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAATTGTAATAAA	-9576640	True	NA	-36	True	NA	NA	NA	9584497	9560352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584185_9584349_9584460
WTC11_00046017	chr19	-	4529	6	FSM	ENSG00000171469.11	ENST00000302851.8	4529	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	26.7686383665662	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	-9618658	True	NA	-10	True	AATAAA	-14	NA	9621232	9607328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618180_9619431_9619583_9621161
WTC11_00046018	chr19	-	4889	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	50.4182506638221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	-9618634	True	NA	-10	True	AATAAA	-14	NA	9621208	9607328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9620915
WTC11_00046019	chr19	-	2017	5	FSM	ENSG00000171469.11	ENST00000326044.9	2017	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	33.8710791088799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAACCATCCATAAC	-9618656	True	NA	-94	True	NA	NA	NA	9621230	9609755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9611337_9617044_9617172_9618090_9618180_9619431_9619583_9621161
WTC11_00046026	chr19	-	12388	6	FSM	ENSG00000171466.10	ENST00000453372.7	12639	6	0	251	0	-250	multi-exon	FALSE	canonical	3	7	junction_3	6.96850055607374	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTCCTCCCCACCC	-9673679	True	NA	NA	False	NA	NA	NA	9675100	9642057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9653882_9656546_9656654_9658008_9658136_9659378_9659468_9660719_9660875_9675014
WTC11_00046027	chr19	-	439	3	FSM	ENSG00000171466.10	ENST00000585350.1	577	3	138	0	138	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAGGGAACCAATCTG	-9674898	False	NA	NA	False	NA	NA	NA	9674910	9659462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9659468_9660719_9660875_9674631
WTC11_00046028	chr19	-	268	1	FSM	ENSG00000267370.1	ENST00000588113.1	712	1	-117	561	-117	-561	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCTACAAATGTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	9756980	9756712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9756700_9757000
WTC11_00046030	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.41063228481487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	-9768538	True	NA	NA	False	NA	NA	NA	9768617	9757474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
WTC11_00046031	chr19	-	647	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	-9792839	True	NA	-1	True	AATAAA	-22	NA	9793177	9787407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9787811_9792933
WTC11_00046033	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9816297	True	NA	0	True	ATTAAA	-29	NA	9818829	9810266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544
WTC11_00046034	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-9818189	True	NA	-4	True	ATTAAA	-25	NA	9819076	9810270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544_9818618_9818753
WTC11_00046036	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.562405977797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9818192	True	NA	0	True	ATTAAA	-29	NA	9819079	9810266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
WTC11_00046037	chr19	-	1886	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	3	-1010	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	14.0554457615387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTATTCAGTTTATTC	-9818189	True	NA	-5	True	ATTAAA	-24	NA	9819076	9810271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
WTC11_00046038	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-9818192	True	NA	-3	True	ATTAAA	-26	NA	9819079	9810269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544_9818618_9818727
WTC11_00046041	chr19	-	2175	7	NNC	ENSG00000105088.9	novel	2124	6	NA	NA	-27	20878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	322.910419294406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAACCCAAAAAAGTCAAC	-9913771	True	NA	NA	False	NA	NA	NA	9913863	9832839	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9832865_9853718_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9913482
WTC11_00046042	chr19	-	2016	7	NNC	ENSG00000105088.9	novel	1982	6	NA	NA	-10	20878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.239001663267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAACCCAAAAAAGTCAAC	-9936513	False	NA	NA	False	NA	NA	NA	9936525	9832839	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9832865_9853718_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
WTC11_00046043	chr19	-	2624	6	FSM	ENSG00000105088.9	ENST00000593091.2	2124	6	0	-500	0	500	multi-exon	FALSE	canonical	3	43	junction_5	265.481148106603	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTAATTTTTGTGTTTT	-9913744	True	NA	NA	False	NA	NA	NA	9913836	9853217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9913482
WTC11_00046044	chr19	-	2482	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	-500	0	500	multi-exon	FALSE	canonical	3	682	junction_1	19.6020407100893	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTAATTTTTGTGTTTT	-9932493	True	NA	NA	False	NA	NA	NA	9936515	9853217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
WTC11_00046046	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_4	121.602796020486	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	-10088965	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
WTC11_00046047	chr19	-	873	10	FSM	ENSG00000130811.12	ENST00000589454.5	873	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	661.149167905566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGGTGTCCGGCTTTGGC	-10088930	True	NA	NA	False	NA	NA	NA	10119864	10115533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10115586_10115683_10115821_10115966_10116075_10116823_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
WTC11_00046051	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	918.528850935015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	-10088766	False	NA	65	True	AATAAA	-37	NA	10119700	10118075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
WTC11_00046052	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	828.547500147095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-10088974	True	NA	NA	False	NA	NA	NA	10119908	10118369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
WTC11_00046053	chr19	-	352	3	FSM	ENSG00000130811.12	ENST00000587168.1	352	3	0	0	0	0	multi-exon	FALSE	canonical	3	2192	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGAAGTTCAAGGTGA	-10088914	True	NA	NA	False	CATAAA	-31	NA	10119848	10118883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10118957_10119087_10119172_10119653
WTC11_00046056	chr19	-	5219	40	NIC	ENSG00000130816.17	novel	5408	40	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	146.189581776046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10184078	True	NA	47	True	AATAAA	-17	NA	10194931	10133345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137075_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166591_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046057	chr19	-	5215	41	FSM	ENSG00000130816.17	ENST00000592705.5	5215	41	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_38	156.897291244942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10184081	True	NA	47	True	AATAAA	-17	NA	10194934	10133345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180530_10180777_10180886_10182040_10182078_10194819
WTC11_00046058	chr19	-	5274	41	FSM	ENSG00000130816.17	ENST00000359526.9	5274	41	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_37	131.65442453636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10184100	True	NA	47	True	AATAAA	-17	NA	10194953	10133345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046059	chr19	-	5374	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	34	0	34	0	multi-exon	FALSE	canonical	3	468	junction_36	83.2966941150313	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10195078	True	NA	47	True	AATAAA	-17	NA	10195101	10133345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046064	chr19	-	3309	18	FSM	ENSG00000130816.17	ENST00000678647.1	3302	18	0	-7	0	0	multi-exon	FALSE	canonical	3	112	junction_4	151.121642609693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10151728	False	NA	42	True	AATAAA	-12	NA	10151747	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137075_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397
WTC11_00046067	chr19	-	6475	29	FSM	ENSG00000130816.17	ENST00000677783.1	6469	29	0	-6	0	0	multi-exon	FALSE	canonical	3	494	junction_21	75.6487839982122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10164651	False	NA	42	True	AATAAA	-12	NA	10164673	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325
WTC11_00046068	chr19	-	5851	30	FSM	ENSG00000130816.17	ENST00000676868.1	5845	30	0	-6	0	0	multi-exon	FALSE	canonical	3	494	junction_22	74.3400932533899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10164865	False	NA	42	True	AATAAA	-12	NA	10164887	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325
WTC11_00046069	chr19	-	6063	35	FSM	ENSG00000130816.17	ENST00000678024.1	6142	35	79	0	79	0	multi-exon	FALSE	canonical	0	0	junction_29	131.851589658607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAAACCACCCTGGGTG	-10177858	False	NA	36	True	AATAAA	-6	NA	10177870	10133356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166591_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291
WTC11_00046073	chr19	-	6061	39	FSM	ENSG00000130816.17	ENST00000676820.1	6055	39	0	-6	0	0	multi-exon	FALSE	canonical	3	468	junction_35	84.2885658133403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10184102	True	NA	42	True	AATAAA	-12	NA	10194955	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046074	chr19	-	7166	38	FSM	ENSG00000130816.17	ENST00000676610.1	7157	38	0	-9	0	0	multi-exon	FALSE	canonical	3	468	junction_34	73.0185243214574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10184102	True	NA	42	True	AATAAA	-12	NA	10194955	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046075	chr19	-	5132	39	FSM	ENSG00000130816.17	ENST00000679103.1	5126	39	0	-6	0	0	multi-exon	FALSE	canonical	3	35	junction_1	114.190554280906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-10184102	True	NA	42	True	AATAAA	-12	NA	10194955	10133350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00046084	chr19	-	841	9	FSM	ENSG00000130816.17	ENST00000588952.5	841	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	223.234426948444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	-10230194	True	NA	27	True	AAGAAA	-12	NA	10231286	10173089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10218751_10218870_10231203
WTC11_00046088	chr19	-	3643	2	FSM	ENSG00000267534.4	ENST00000646641.1	3643	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGTTGGTGTGTCTT	-10230239	True	NA	-7	True	AATAAA	-17	NA	10231331	10221432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10224948_10231203
WTC11_00046089	chr19	-	2299	4	FSM	ENSG00000220201.7	ENST00000403903.7	2303	4	0	4	0	-4	multi-exon	FALSE	canonical	3	38	junction_2	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAAAAGCCTGTGATT	-10309870	False	NA	-5	True	AATAAA	-16	NA	10309880	10304806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184
WTC11_00046091	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	71.820957944043	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-10312653	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
WTC11_00046092	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	198.236110624567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-10315784	False	NA	-8	True	AATAAA	-13	NA	10315795	10310216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
WTC11_00046093	chr19	-	932	4	FSM	ENSG00000267673.6	ENST00000453681.1	635	4	-5	-292	0	0	multi-exon	FALSE	canonical	3	339	junction_3	46.0072458061409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-10312653	True	NA	-8	True	AATAAA	-13	NA	10316015	10310216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704
WTC11_00046094	chr19	-	584	5	FSM	ENSG00000267673.6	ENST00000494368.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	178.572814280338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGGAGAGAGTCCC	-10312653	True	NA	NA	False	NA	NA	NA	10316015	10310354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315969
WTC11_00046096	chr19	-	637	4	FSM	ENSG00000267673.6	ENST00000343376.8	614	4	0	-23	0	0	multi-exon	FALSE	canonical	3	35	junction_1	170.177032005562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCCACATTGCCATGG	-10312651	True	NA	NA	False	NA	NA	NA	10316013	10310472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310606_10310852_10310941_10315385_10315493_10315704
WTC11_00046098	chr19	-	3519	14	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	2542	intron_retention	FALSE	non_canonical	0	0	junction_1	189.061181043372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATG	-10328919	True	NA	NA	False	NA	NA	NA	10333529	10313669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10316211_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
WTC11_00046099	chr19	-	1646	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	0	77463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.63478601478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATG	-10379766	True	NA	NA	False	NA	NA	NA	10403530	10313669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313706_10391128_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
WTC11_00046100	chr19	-	1651	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	0	77463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.63478601478	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATG	-10379778	True	NA	NA	False	NA	NA	NA	10403542	10313669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10391134_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
WTC11_00046101	chr19	-	1792	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	-129	77463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.63478601478	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATG	-10403652	False	NA	NA	False	NA	NA	NA	10403671	10313669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313703_10391120_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
WTC11_00046102	chr19	-	529	2	FSM	ENSG00000267673.6	ENST00000486454.1	584	2	0	55	0	-55	multi-exon	FALSE	canonical	3	266	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACCGGGCAGAGGGA	-10312644	True	NA	NA	False	NA	NA	NA	10316006	10315385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10315760_10315851
WTC11_00046104	chr19	-	3481	13	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_7	190.269545645119	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	-10328919	True	NA	NA	False	ATTAAA	-28	NA	10333529	10316211	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321616_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
WTC11_00046105	chr19	-	3592	13	FSM	ENSG00000161847.14	ENST00000611074.4	3586	13	0	-6	0	-1	multi-exon	FALSE	canonical	3	618	junction_10	51.7807879430199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGTTGGCTGGTTCTT	-10333116	False	NA	NA	False	ATTAAA	-27	NA	10333638	10316212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
WTC11_00046109	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	49.5939064357261	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339102	False	522	0	True	AATAAA	-18	NA	10339624	10333775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
WTC11_00046110	chr19	-	2491	4	FSM	ENSG00000076662.10	ENST00000587992.1	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	36.1109401705356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339139	False	NA	0	True	AATAAA	-18	NA	10339661	10333775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10335977_10338681_10338949_10339538
WTC11_00046111	chr19	-	2270	6	FSM	ENSG00000076662.10	ENST00000589900.5	2057	6	-213	0	-181	0	multi-exon	FALSE	canonical	3	42	junction_3	46.6990363926281	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339320	True	NA	0	True	AATAAA	-18	NA	10339842	10333775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335977_10338681_10338949_10339538
WTC11_00046112	chr19	-	4250	25	FSM	ENSG00000105397.14	ENST00000525621.6	4243	25	0	-7	0	3	multi-exon	FALSE	canonical	3	14	junction_5	23.0125267819266	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTTTTGGAGCCCTC	-10379022	True	NA	-5	True	AATAAA	-23	NA	10380572	10350525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353527_10353647_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
WTC11_00046113	chr19	-	558	4	FSM	ENSG00000105397.14	ENST00000530560.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	5.31245915016974	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGGGATGTCAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	10356613	10350747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567
WTC11_00046114	chr19	-	350	2	FSM	ENSG00000105397.14	ENST00000524470.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCAGCGTGTGCTGAG	-10351171	False	NA	NA	False	NA	NA	NA	10351285	10350852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051
WTC11_00046115	chr19	-	628	6	FSM	ENSG00000105397.14	ENST00000527481.2	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	41.9285105864733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGAGACAGAGGCGTCC	NA	False	NA	NA	False	NA	NA	NA	10354522	10350946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10354041_10354235_10354511
WTC11_00046121	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_5	106.673639227892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-10379778	True	NA	-28	True	AATAAA	-16	NA	10403542	10391132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
WTC11_00046122	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1342	junction_5	50.2449555234708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	-10379766	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
WTC11_00046128	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	166.428843653977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10502570	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
WTC11_00046129	chr19	-	2696	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	-48	0	-48	0	multi-exon	FALSE	canonical	3	315	junction_5	70.382952481407	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	-10502934	False	NA	-8	True	AATAAA	-24	NA	10502944	10486125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
WTC11_00046130	chr19	-	2333	5	NIC	ENSG00000079999.14	novel	2648	6	NA	NA	-102	-2	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	200.355153415129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCTGGCTCTGGGCTGG	-10499821	True	NA	-10	True	AATAAA	-22	NA	10502789	10486127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10486819_10489191_10489369_10491576_10492263_10499394_10500081_10502696
WTC11_00046131	chr19	-	451	2	FSM	ENSG00000079999.14	ENST00000590237.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCATTGTTTTTGTACA	-10489416	False	NA	-19	True	AATACA	-12	NA	10489435	10486611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489191
WTC11_00046134	chr19	-	2272	2	FSM	ENSG00000180739.15	ENST00000333430.6	2338	2	-139	205	-139	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTCTTTCTTTCTT	-10517481	False	NA	-6	True	AATAAA	-18	NA	10517586	10512946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10515030_10517397
WTC11_00046135	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.566394575821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562603	True	NA	-7	True	AATAAA	-24	NA	10565997	10553084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
WTC11_00046136	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	25.0843023068656	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562632	True	NA	-7	True	AATAAA	-24	NA	10566026	10553084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
WTC11_00046138	chr19	-	671	5	FSM	ENSG00000129347.21	ENST00000537433.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	87.8891347095874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGAAAAAGCGGCAGGT	-10559415	False	NA	NA	False	NA	NA	NA	10559476	10555130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10559358
WTC11_00046140	chr19	-	1428	2	FSM	ENSG00000129355.7	ENST00000393599.3	1425	2	0	-3	0	3	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGGCTTCTGATTTTTG	-10568962	False	NA	1	True	ATTAAA	-26	NA	10568979	10566456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10567418_10568512
WTC11_00046141	chr19	-	544	4	FSM	ENSG00000129354.12	ENST00000587069.5	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	509.971458896367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10572125	False	NA	-10	True	ATTAAA	-13	NA	10577314	10572670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10572896_10574416_10574493_10574903_10575030_10577197
WTC11_00046142	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	284.910860353036	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10582126	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
WTC11_00046143	chr19	-	1748	12	FSM	ENSG00000129354.12	ENST00000250244.11	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	858	junction_6	87.5630587416768	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10582123	True	NA	-10	True	ATTAAA	-13	NA	10587312	10572670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579859_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
WTC11_00046146	chr19	-	1990	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	-10	3	-10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCTCTGGTCCTTTG	-10651495	True	NA	-7	True	AATAAA	-18	NA	10653854	10651864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10651900_10653900
WTC11_00046147	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	8.98146239020499	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-10833037	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
WTC11_00046148	chr19	-	2073	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	14	0	-10	0	multi-exon	TRUE	canonical	3	71	junction_9	82.8860589329237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-10925329	True	NA	-4	True	AATAAA	-22	NA	10928667	10922184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
WTC11_00046149	chr19	-	2119	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	-8	0	0	multi-exon	FALSE	canonical	3	244	junction_9	34.231239793174	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-10925301	True	NA	-4	True	AATAAA	-22	NA	10928639	10922184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
WTC11_00046151	chr19	-	1219	8	NIC	ENSG00000130733.11	novel	2087	10	NA	NA	0	-31	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	146.527283800524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGAAGGAGAAGAAAACT	-10925287	True	NA	-63	True	NA	NA	NA	10928625	10922800	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10927629_10927770_10928379_10928441_10928584
WTC11_00046158	chr19	-	2308	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-19	1	6	-1	multi-exon	FALSE	canonical	3	17	junction_1	8.86002257333467	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	-11147771	True	NA	-15	True	AATAAA	-22	NA	11155801	11145493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
WTC11_00046160	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5462171841441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	-11147735	True	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
WTC11_00046161	chr19	-	707	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	-8	0	8	multi-exon	FALSE	canonical	3	27	junction_1	5.43650214343336	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTGGTACCTCACGCC	-11147739	True	NA	NA	False	AATAAA	-21	NA	11155769	11147590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
WTC11_00046162	chr19	-	5209	14	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	32.9112128156056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	-11194645	True	NA	NA	False	AATAAA	-21	NA	11197530	11164266	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11164711_11164738_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
WTC11_00046163	chr19	-	5186	13	FSM	ENSG00000197256.11	ENST00000586659.6	5183	13	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_12	35.3799809999321	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	-11194660	True	NA	NA	False	AATAAA	-21	NA	11197545	11164266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195621_11195821_11197484
WTC11_00046167	chr19	-	6585	50	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_27	34.3759623696266	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-11260636	True	NA	-5	True	TTTAAA	-18	NA	11262481	11199294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297_11229391_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
WTC11_00046168	chr19	-	6434	48	FSM	ENSG00000130158.14	ENST00000294618.12	6430	48	0	-4	0	4	multi-exon	FALSE	canonical	2	3	junction_26	34.427741033188	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTGGTGCGGTCACT	-11260679	True	NA	-1	True	TTTAAA	-22	NA	11262524	11199290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
WTC11_00046169	chr19	-	4009	30	FSM	ENSG00000130158.14	ENST00000587656.5	4009	30	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_26	33.1020833051921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCACAAGGACCAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	11236497	11199496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345
WTC11_00046175	chr19	-	447	1	FSM	ENSG00000130158.14	ENST00000591750.1	3023	1	1566	1010	-858	-1010	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCACCTGGTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	11237355	11236908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11236900_11237400
WTC11_00046177	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	15.4333243340507	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-11331649	False	8008	-25	True	AAGAAA	-24	NA	11339657	11322067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
WTC11_00046178	chr19	-	1154	2	FSM	ENSG00000105518.14	ENST00000585722.1	1147	2	0	-7	0	5	multi-exon	TRUE	canonical	3	616	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTTTTTCCCCCA	-11338047	False	NA	3	True	AATAAA	-22	NA	11346055	11342770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251
WTC11_00046179	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338202	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11346126
WTC11_00046180	chr19	-	1263	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	-7	0	5	multi-exon	FALSE	canonical	3	616	junction_1	8.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTTTTTCCCCCA	-11338260	True	NA	3	True	AATAAA	-22	NA	11346268	11342770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519
WTC11_00046181	chr19	-	872	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	-23	-9	0	0	multi-exon	FALSE	canonical	3	133	junction_3	231.799242640887	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338263	True	NA	-2	True	AATAAA	-17	NA	11346271	11342775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
WTC11_00046182	chr19	-	796	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	-8	0	5	multi-exon	FALSE	canonical	3	18	junction_3	285.991064351474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTTTTTCCCCCA	-11338263	True	NA	3	True	AATAAA	-22	NA	11346271	11342770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
WTC11_00046185	chr19	-	797	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	-5	0	5	multi-exon	FALSE	canonical	3	377	junction_3	116.878854660142	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTTTTTCCCCCA	-11338292	True	NA	3	True	AATAAA	-22	NA	11346300	11342770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
WTC11_00046187	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	14.9516226680639	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-11383934	True	NA	NA	False	AATAAA	-17	NA	11384314	11377206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
WTC11_00046188	chr19	-	2086	7	FSM	ENSG00000187266.14	ENST00000592375.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	15.8394724940223	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGTTAAACAGCTC	-11383932	True	NA	-30	True	NA	NA	NA	11384312	11377624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
WTC11_00046191	chr19	-	2303	19	FSM	ENSG00000205517.13	ENST00000562663.5	2303	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	51.9482173317874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCGCCTGGTCGGGAA	-11419249	False	NA	NA	False	NA	NA	NA	11419273	11384340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11384645_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415946_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
WTC11_00046193	chr19	-	2149	13	FSM	ENSG00000205517.13	ENST00000566153.5	2149	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	37.528045068544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	-11411256	False	NA	-1	True	NA	NA	NA	11411270	11394055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11411252
WTC11_00046194	chr19	-	2515	19	FSM	ENSG00000205517.13	ENST00000380456.8	2511	19	0	-4	0	0	multi-exon	FALSE	canonical	3	38	junction_18	35.138570486041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	-11417760	True	NA	-1	True	NA	NA	NA	11419314	11394055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
WTC11_00046195	chr19	-	2278	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	42.260837604829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	-11417774	True	NA	NA	False	NA	NA	NA	11419328	11394324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
WTC11_00046201	chr19	-	888	5	ISM	ENSG00000198003.12	ENST00000356392.9	2123	13	12274	0	12052	0	3prime_fragment	FALSE	canonical	2	2	junction_4	61.2551018283375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11422823	True	NA	-8	True	AATAAA	-15	NA	11422847	11420604	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11420948_11421127_11421213_11421676_11421833_11422470_11422628_11422700
WTC11_00046203	chr19	-	2162	9	FSM	ENSG00000161914.10	ENST00000293771.10	2154	9	0	-8	0	6	multi-exon	TRUE	canonical	3	18	junction_5	6.31961232988227	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAGGCCTGAATGATT	-11505535	True	NA	-13	True	ATTAAA	-22	NA	11505839	11483420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
WTC11_00046205	chr19	-	831	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	-13	0	13	multi-exon	FALSE	canonical	3	19	junction_2	154.156373530257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCTTTTGGCG	-11525859	True	NA	1	True	AATAAA	-44	NA	11529096	11505915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
WTC11_00046206	chr19	-	1660	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	-13	0	13	multi-exon	FALSE	canonical	3	273	junction_4	34.2755937443921	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCTTTTGGCG	-11525897	True	NA	1	True	AATAAA	-44	NA	11529134	11505915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
WTC11_00046207	chr19	-	1514	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	-13	0	13	multi-exon	FALSE	canonical	3	19	junction_2	111.038156604936	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCTTTTGGCG	-11525900	True	NA	1	True	AATAAA	-44	NA	11529137	11505915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
WTC11_00046213	chr19	-	1021	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	-2	0	2	multi-exon	FALSE	canonical	3	558	junction_3	74.253320165199	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCGTGATGTCTTGG	-11555331	True	NA	-11	True	AATAAA	-20	NA	11559236	11553040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
WTC11_00046214	chr19	-	679	4	FSM	ENSG00000130165.10	ENST00000591674.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	326.662244868032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTCACTGGGGTGGCC	-11551810	False	NA	NA	False	NA	NA	NA	11555715	11553530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11555521
WTC11_00046215	chr19	-	658	4	FSM	ENSG00000130165.10	ENST00000586120.5	658	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	335.142092584954	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTGAGTGAGTGTGG	-11550889	False	NA	NA	False	NA	NA	NA	11554794	11553563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554588
WTC11_00046216	chr19	-	899	3	FSM	ENSG00000130165.10	ENST00000591912.1	899	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	363.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-11551750	False	NA	NA	False	NA	NA	NA	11555655	11553627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11554082_11554231_11554366_11555344
WTC11_00046217	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	12.0508183216835	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578335	True	NA	0	True	AATAAA	-22	NA	11578985	11574659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
WTC11_00046218	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	11.1247471881387	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	-11578336	True	NA	-31	True	NA	NA	NA	11578986	11574690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
WTC11_00046219	chr19	-	895	4	FSM	ENSG00000102575.13	ENST00000588524.5	1011	4	0	116	0	16	multi-exon	FALSE	canonical	3	9	junction_3	6.79869268479038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCACCCTCAGCCCTG	-11578326	True	NA	NA	False	NA	NA	NA	11578976	11576715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11577318_11577592_11577680_11578584_11578658_11578843
WTC11_00046220	chr19	-	1576	2	Genic_Genomic	ENSG00000214223.4	novel	962	1	NA	NA	-27949	362	multi-exon	FALSE	canonical	3	5	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAATATACCTATTTCT	-11694347	True	NA	NA	False	AATAAA	-42	NA	11694979	11665706	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_11667102_11694798
WTC11_00046222	chr19	-	2399	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	-3	0	3	multi-exon	FALSE	canonical	3	15	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTGTTTTGTGACC	-11738506	True	NA	0	True	ATTAAA	-21	NA	11738946	11721261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
WTC11_00046223	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.12414379544733	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035439	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
WTC11_00046224	chr19	-	212	1	FSM	ENSG00000212497.1	ENST00000391195.1	109	1	59	-162	59	162	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAAATAATAGAATGTG	-12027713	False	NA	NA	False	ATTAAA	-9	NA	12027962	12027750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12027800_12028000
WTC11_00046225	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.16024689946929	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	-12051768	True	NA	NA	False	NA	NA	NA	12052961	12043804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
WTC11_00046226	chr19	-	2987	5	NNC	ENSG00000132010.16	novel	3004	4	NA	NA	0	9082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8729303501073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGTGGCCGGGTGCGGTG	-12139154	True	NA	NA	False	AAAAAG	-44	NA	12140315	12121402	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12121429_12131357_12133986_12135499_12135561_12135768_12135905_12140179
WTC11_00046227	chr19	-	3112	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	-2470	0	152	multi-exon	FALSE	canonical	3	30	junction_3	8.17856276425687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAAGCTCCGCTTCCT	-12139154	True	NA	NA	False	NA	NA	NA	12140315	12131197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
WTC11_00046228	chr19	-	3262	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	-106	-152	-101	152	multi-exon	FALSE	canonical	3	28	junction_3	9.03081145609604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAAGCTCCGCTTCCT	-12140429	False	NA	NA	False	NA	NA	NA	12140456	12131197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
WTC11_00046229	chr19	-	1640	1	FSM	ENSG00000242615.1	ENST00000472362.1	1517	1	-163	40	-163	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGGCTGGAAACCAGAA	-12143458	False	NA	NA	False	NA	NA	NA	12143485	12141845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12141800_12143500
WTC11_00046230	chr19	-	2112	2	NNC	ENSG00000257591.6	novel	695	4	NA	NA	3525	244	intron_retention	TRUE	canonical	3	47	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGGCTGGAAACCAGAA	-12144250	False	NA	NA	False	NA	NA	NA	12144277	12141845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12143687_12144006
WTC11_00046231	chr19	-	993	4	NIC	ENSG00000257591.6	novel	695	4	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	19	junction_1	11.8602979164381	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTATGTGTTTCTTTT	-12154160	True	NA	-12	True	AATAAA	-9	NA	12156719	12142095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12142737_12147394_12147456_12147675_12147803_12156555
WTC11_00046233	chr19	-	2621	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	14	1	11	-1	multi-exon	FALSE	canonical	3	18	junction_3	5.73488351136175	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTACATAGTTGTAT	-12294098	True	NA	-2	True	ATTAAA	-20	NA	12294869	12271808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
WTC11_00046234	chr19	-	2682	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	17	0	-17	multi-exon	FALSE	canonical	3	21	junction_1	3.29983164553722	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAAGGA	-12332965	True	NA	NA	False	AAAACA	-16	NA	12333633	12317493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
WTC11_00046237	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.28653526310404	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-12400556	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
WTC11_00046238	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	2.05480466765633	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	-12440422	True	NA	-1	True	ATTAAA	-22	NA	12441021	12429705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
WTC11_00046239	chr19	-	4886	4	FSM	ENSG00000242852.7	ENST00000397732.8	4897	4	0	11	0	-11	multi-exon	FALSE	canonical	3	7	junction_1	1.88561808316413	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATTATAGATTTTCAG	-12484312	True	NA	NA	False	ATTAAA	-9	NA	12484816	12461194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12465734_12466461_12466520_12466723_12466851_12484654
WTC11_00046240	chr19	-	3358	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	-36	-437	24	437	multi-exon	FALSE	canonical	3	51	junction_1	4.49691252107735	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGATGAATAAACAAAAG	-12549660	True	NA	NA	False	NA	NA	NA	12551518	12524935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
WTC11_00046243	chr19	-	742	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4478	28938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGACGCAGTGGCTCAC	-12643825	False	NA	NA	False	NA	NA	NA	12643919	12614892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614929_12643213
WTC11_00046244	chr19	-	737	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4478	28938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGACGCAGTGGCTCAC	-12643825	False	NA	NA	False	NA	NA	NA	12643919	12614892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614928_12643217
WTC11_00046245	chr19	-	736	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4478	28938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGACGCAGTGGCTCAC	-12643825	False	NA	NA	False	NA	NA	NA	12643919	12614892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614927_12643217
WTC11_00046247	chr19	-	3189	24	NNC	ENSG00000104774.13	novel	3185	24	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_17	31.092580822933	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTCTGTGACTGAGTGT	-12645777	False	20965	-18	True	ATTAAA	-21	NA	12666742	12646510	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658514_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
WTC11_00046248	chr19	-	3186	24	FSM	ENSG00000104774.13	ENST00000456935.7	3185	24	0	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_17	17.9150484314851	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTCTGTGACTGAGTGT	-12645777	False	20965	-18	True	ATTAAA	-21	NA	12666742	12646510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
WTC11_00046252	chr19	-	619	4	FSM	ENSG00000105583.11	ENST00000596731.7	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	1669	junction_3	184.966663663122	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCAGCCTCTTCTGTTC	-12648450	True	NA	-20	True	AATAAA	-14	NA	12669415	12668072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12668426_12668519_12668618_12669127_12669234_12669353
WTC11_00046253	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	890.462177124267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	-12648438	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
WTC11_00046254	chr19	-	627	3	FSM	ENSG00000105583.11	ENST00000598732.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	1669	junction_2	86	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCATGTTTCTAGGGG	-12648436	True	NA	-92	True	NA	NA	NA	12669401	12668144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12668618_12669127_12669234_12669353
WTC11_00046255	chr19	-	1095	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	-5	0	0	multi-exon	FALSE	canonical	3	50	junction_2	140.397249813171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12674774	False	NA	-2	True	NA	NA	NA	12681771	12675716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
WTC11_00046256	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	53.1458782503404	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12674883	True	NA	-2	True	NA	NA	NA	12681880	12675716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
WTC11_00046257	chr19	-	1093	2	FSM	ENSG00000095059.17	ENST00000600510.1	1085	2	0	-8	0	0	multi-exon	FALSE	canonical	3	504	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	-12669921	False	NA	-28	True	NA	NA	NA	12676918	12675742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016
WTC11_00046258	chr19	-	1166	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	6	0	6	0	multi-exon	FALSE	canonical	3	21	junction_8	141.151016202506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	-12674203	False	6997	-28	True	NA	NA	NA	12681200	12675742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
WTC11_00046265	chr19	-	1733	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	-6	0	6	multi-exon	FALSE	canonical	3	110	junction_6	12.6178396147363	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGAGTGTGGTTTGCCTG	-12695791	True	NA	1	True	AATAAA	-28	NA	12696631	12688909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
WTC11_00046266	chr19	-	4970	25	FSM	ENSG00000105576.16	ENST00000356861.9	4962	25	0	-8	0	8	multi-exon	FALSE	canonical	2	10	junction_24	18.2595104595447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGCTTCCTGTGTCCT	-12722338	False	NA	-2	True	AGTAAA	-26	NA	12722355	12699192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12722133
WTC11_00046267	chr19	-	4801	25	NIC	ENSG00000105576.16	novel	4962	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.999942129518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	-12722520	False	5365	-10	True	AGTAAA	-18	NA	12722537	12699200	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12722476
WTC11_00046268	chr19	-	5029	26	NIC	ENSG00000105576.16	novel	5051	26	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	20.4370643684459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGCTTCCTGTGTCCT	-12718567	True	NA	-2	True	AGTAAA	-26	NA	12723932	12699192	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
WTC11_00046269	chr19	-	5059	26	FSM	ENSG00000105576.16	ENST00000425528.6	5051	26	0	-8	0	8	multi-exon	FALSE	canonical	1	3	junction_5	23.2670066832844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGCTTCCTGTGTCCT	-12718567	True	NA	-2	True	AGTAAA	-26	NA	12723932	12699192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702178_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
WTC11_00046279	chr19	-	918	4	NNC	ENSG00000123144.11	novel	879	3	NA	NA	0	5537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	957.873106882581	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAATAGGAA	-12712730	True	NA	NA	False	AAAAAG	-2	NA	12734684	12725102	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12725142_12730639_12731069_12731343_12731422_12734312
WTC11_00046282	chr19	-	2539	23	NNC	ENSG00000095066.12	novel	2547	23	NA	NA	0	8941	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.7492127806262	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCAGCCCTTTGGGTC	-12768513	True	NA	NA	False	AAAAAG	-1	NA	12775523	12754061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12754094_12763002_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
WTC11_00046284	chr19	-	2542	23	FSM	ENSG00000095066.12	ENST00000397668.8	2542	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	125.635311138862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	-12768542	True	NA	-33	True	AATAAA	-15	NA	12775552	12763002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765828_12765835_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
WTC11_00046285	chr19	-	2532	22	NNC	ENSG00000095066.12	novel	2603	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	127	junction_4	79.5646601663847	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	-12768542	True	NA	-34	True	AATAAA	-14	NA	12775552	12763003	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764915_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
WTC11_00046286	chr19	-	2571	22	FSM	ENSG00000095066.12	ENST00000264827.9	2603	22	32	0	-16	0	multi-exon	FALSE	canonical	3	311	junction_19	54.5200872091842	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	-12768578	True	NA	-34	True	AATAAA	-14	NA	12775588	12763003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
WTC11_00046301	chr19	-	787	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	-3	0	3	multi-exon	FALSE	canonical	3	234	junction_1	3406.95160664193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGTGTGCTCTGTCC	-12745574	True	NA	-4	True	AATAAA	-23	NA	12801787	12796816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
WTC11_00046302	chr19	-	1723	4	FSM	ENSG00000167815.12	ENST00000466174.5	1717	4	0	-6	0	3	multi-exon	FALSE	canonical	3	7636	junction_3	388.185808888246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGTGTGCTCTGTCC	-12745576	True	NA	-4	True	AATAAA	-23	NA	12801789	12796816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12799858_12801070_12801158_12801271_12801739
WTC11_00046303	chr19	-	931	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	-6	0	3	multi-exon	FALSE	canonical	3	7636	junction_5	469.592589379347	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGTGTGCTCTGTCC	-12745587	True	NA	-4	True	AATAAA	-23	NA	12801800	12796816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
WTC11_00046306	chr19	-	1023	6	FSM	ENSG00000132026.15	ENST00000674343.2	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.18747549010185	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12834495	False	84	-4	True	AATAAA	-17	NA	12834579	12825481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834488
WTC11_00046308	chr19	-	1939	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	-1	0	1	multi-exon	TRUE	canonical	3	176	junction_2	21.5925913220252	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTAACCTTCTCTT	-12877000	True	NA	-3	True	AATAAA	-16	NA	12881449	12875207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
WTC11_00046310	chr19	-	1774	14	NNC	ENSG00000179115.11	novel	2057	14	NA	NA	0	40697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.083692732495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAACAAAGGTCCCAA	-12924111	True	NA	NA	False	AAAAAG	-1	NA	12933642	12881781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12881814_12922478_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
WTC11_00046312	chr19	-	1865	14	NNC	ENSG00000179115.11	novel	2057	14	NA	NA	-20	40697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.083692732495	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAACAAAGGTCCCAA	-12933722	False	NA	NA	False	AAAAAG	-1	NA	12933734	12881781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12881814_12922479_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
WTC11_00046313	chr19	-	1289	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	17	-58	17	58	multi-exon	FALSE	canonical	2	26	junction_5	3.9293765408777	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATAACTTCTAACTCC	-12918850	True	NA	NA	False	NA	NA	NA	12919276	12898727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
WTC11_00046314	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_9	81.1570836231947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	-12924180	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
WTC11_00046315	chr19	-	1841	12	FSM	ENSG00000179115.11	ENST00000588965.5	1831	12	0	-10	0	0	multi-exon	FALSE	canonical	3	1060	junction_8	73.1807453337509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGACCTGTGGGCCACC	-12924165	True	NA	-70	True	NA	NA	NA	12933696	12922529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
WTC11_00046318	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-12923277	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12954527_12956862
WTC11_00046319	chr19	-	220	1	FSM	ENSG00000104903.5	ENST00000590120.1	1547	1	-55	1382	-55	-1382	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACCAGGCTGCAAGAAC	-13102755	False	NA	NA	False	NA	NA	NA	13102779	13102559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13102600_13102800
WTC11_00046320	chr19	-	2258	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	5	0	0	multi-exon	FALSE	canonical	3	272	junction_9	69.9844427156652	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111337	True	NA	-11	True	AATAAA	-20	NA	13116649	13104906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
WTC11_00046321	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	105.887816068879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111345	True	NA	-11	True	AATAAA	-20	NA	13116657	13104906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
WTC11_00046322	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	120.313959659255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
WTC11_00046323	chr19	-	2579	18	FSM	ENSG00000104907.13	ENST00000592062.5	2579	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	117.430712840973	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13117370	False	NA	-11	True	AATAAA	-20	NA	13117567	13104906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652_13117113_13117488
WTC11_00046325	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_10	119.42457700087	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	-13111413	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
WTC11_00046338	chr19	-	1099	8	FSM	ENSG00000104915.15	ENST00000242770.9	1099	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.527906325858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13149984	False	NA	-3	True	AATAAA	-19	NA	13150178	13144061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144487_13144576_13144672_13144767_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
WTC11_00046339	chr19	-	1301	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	0	3	0	1	multi-exon	FALSE	canonical	2	253	junction_6	64.5543593115326	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTGTCGTGTGGTGT	-13144671	True	NA	-2	True	AATAAA	-20	NA	13150375	13144060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
WTC11_00046340	chr19	-	1241	7	FSM	ENSG00000104915.15	ENST00000589083.5	1241	7	0	0	0	0	multi-exon	FALSE	canonical	2	253	junction_5	68.8597608670453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13144522	True	NA	-3	True	AATAAA	-19	NA	13150226	13144061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
WTC11_00046341	chr19	-	1558	6	ISM	ENSG00000104915.15	ENST00000589083.5	1241	7	-79	3	8	-3	intron_retention	FALSE	canonical	2	253	junction_5	68.6072882425767	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTATTTGTGTCGTGTG	-13144601	True	NA	-6	True	AATAAA	-16	NA	13150305	13144064	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
WTC11_00046342	chr19	-	1498	7	FSM	ENSG00000104915.15	ENST00000593126.5	713	7	-576	-209	-32	0	multi-exon	FALSE	canonical	2	11	junction_1	153.078048357329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13150221	False	NA	-3	True	AATAAA	-19	NA	13150415	13144061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144404_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
WTC11_00046344	chr19	-	1164	5	FSM	ENSG00000104915.15	ENST00000588848.5	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_3	19.3002590656188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTATCCCACATGACG	-13144609	True	NA	NA	False	NA	NA	NA	13150313	13144600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498
WTC11_00046346	chr19	-	202	1	FSM	ENSG00000141837.22	ENST00000636670.1	740	1	50	488	50	-488	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTACCCTTGCCGACC	NA	False	NA	NA	False	NA	NA	NA	13227632	13227430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13227400_13227600
WTC11_00046347	chr19	-	1376	6	FSM	ENSG00000141837.22	ENST00000637832.1	701	6	0	-675	0	675	multi-exon	FALSE	canonical	2	2	junction_1	5.9194594347795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTCTCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13235674	13227941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13228796_13230081_13230210_13231709_13231861_13234920_13235037_13235208_13235275_13235613
WTC11_00046350	chr19	-	488	5	FSM	ENSG00000141837.22	ENST00000635786.1	2840	5	0	2352	0	-1912	multi-exon	FALSE	canonical	3	12	junction_4	3.49106001094224	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTCCTCGCAAGGGT	NA	False	NA	NA	False	NA	NA	NA	13286554	13275849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13275957_13277068_13277129_13283266_13283397_13285067_13285207_13286502
WTC11_00046351	chr19	-	595	3	FSM	ENSG00000141837.22	ENST00000637117.1	1124	3	26	503	26	-435	multi-exon	FALSE	canonical	2	5	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTCCACCTGGCCC	NA	False	NA	NA	False	NA	NA	NA	13308805	13307781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13307855_13308119_13308252_13308415
WTC11_00046352	chr19	-	11223	1	FSM	ENSG00000267519.6	ENST00000587762.2	19049	1	6642	1184	6642	-1184	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTCAAAAAAAAAAAAAAG	-13836020	False	NA	NA	False	NA	NA	NA	13836286	13825063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13825100_13836300
WTC11_00046353	chr19	-	2461	8	ISM	ENSG00000132016.12	ENST00000586783.6	2885	9	1225	0	1215	0	3prime_fragment	FALSE	canonical	3	12	junction_2	5.14682386704338	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTTTGGGGCTGAGG	-13904868	False	NA	-5	True	AATAAA	-23	NA	13904892	13882347	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13882953_13883307_13883401_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861
WTC11_00046354	chr19	-	649	4	FSM	ENSG00000132000.14	ENST00000586075.1	739	4	90	0	59	0	multi-exon	TRUE	canonical	3	7	junction_3	1.24721912892465	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGGGCCTGCACACGCT	-13937959	True	NA	NA	False	GGGGCT	-10	NA	13938006	13933238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13933456_13933877_13933994_13936366_13936461_13937784
WTC11_00046355	chr19	-	1748	4	ISM	ENSG00000132005.9	ENST00000254325.9	4375	21	42570	0	305	0	3prime_fragment	FALSE	canonical	1	3	junction_1	4.24264068711928	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-13962367	True	NA	-4	True	AATAAA	-22	NA	13963750	13961529	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537
WTC11_00046356	chr19	-	2093	10	FSM	ENSG00000132005.9	ENST00000589239.5	2122	10	29	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGGCTGGAGTGCAG	-14004291	True	NA	NA	False	NA	NA	NA	14006293	13969639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
WTC11_00046357	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.57171971404746	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14055800	True	NA	-9	True	AATAAA	-17	NA	14057599	14053366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
WTC11_00046358	chr19	-	2207	5	FSM	ENSG00000141858.12	ENST00000533683.7	2196	5	0	-11	0	11	multi-exon	FALSE	canonical	3	485	junction_4	7.56224173112709	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGGAGTCCATTTTATG	-14087052	True	NA	-3	True	AATAAA	-30	NA	14090751	14087839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784
WTC11_00046359	chr19	-	2107	6	NIC	ENSG00000141858.12	novel	2196	5	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	76	junction_5	168.635702032517	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGGAGTCCATTTTATG	-14091003	False	NA	-3	True	AATAAA	-30	NA	14091013	14087839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784_14090576_14090937
WTC11_00046360	chr19	-	2695	10	FSM	ENSG00000072062.15	ENST00000308677.9	2695	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	10.8023774246548	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGCTGGTGTTCTCGAC	-14113697	True	NA	-1	True	AATAAA	-19	NA	14117762	14091687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14093238_14093627_14093793_14097360_14097484_14097578_14097675_14097763_14097891_14100825_14100909_14102815_14102915_14106759_14106889_14107347_14107410_14117501
WTC11_00046361	chr19	-	2470	9	NIC	ENSG00000072062.15	novel	2695	10	NA	NA	26	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	17.1318416990118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCGCTGGTGTTCT	-14113641	True	NA	-5	True	AATAAA	-15	NA	14117706	14091691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14093238_14097360_14097484_14097578_14097675_14097763_14097891_14100825_14100909_14102815_14102915_14106759_14106889_14107347_14107410_14117501
WTC11_00046363	chr19	-	1693	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	-4	0	4	multi-exon	FALSE	canonical	3	219	junction_2	14.522013940528	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGCTTTTGTCTCTG	-14132853	True	NA	0	True	ATTAAA	-43	NA	14136589	14119507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
WTC11_00046365	chr19	-	7860	24	FSM	ENSG00000072071.17	ENST00000340736.10	7853	24	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_19	47.4384289038118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGACTTCTTGAGT	-14206166	False	NA	1	True	AATAAA	-28	NA	14206187	14147735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14167015_14167031_14170681_14170792_14177530_14177745_14183532_14183698_14205984
WTC11_00046366	chr19	-	8507	23	FSM	ENSG00000072071.17	ENST00000361434.8	7820	23	-680	-7	-662	7	multi-exon	FALSE	canonical	3	69	junction_19	32.0041319646373	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGACTTCTTGAGT	-14203863	True	NA	1	True	AATAAA	-28	NA	14206849	14147735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
WTC11_00046368	chr19	-	791	5	FSM	ENSG00000072071.17	ENST00000592164.1	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	62.0176386199926	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGCCGAGGACGGCGCC	-14152832	False	66	NA	False	NA	NA	NA	14152850	14151207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14151616_14152132_14152223_14152308_14152438_14152516_14152614_14152783
WTC11_00046371	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	53.5148577499744	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	-14405963	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
WTC11_00046373	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	58.5030715005631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405959	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
WTC11_00046384	chr19	-	1891	9	NNC	ENSG00000123159.16	novel	1921	9	NA	NA	0	51290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.386601548418	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGCGGTGGCTGACG	-14491755	True	NA	NA	False	AATAGA	-43	NA	14496127	14426469	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14426498_14477763_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
WTC11_00046385	chr19	-	1944	10	NNC	ENSG00000123159.16	novel	1921	9	NA	NA	0	51290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	315.62812154672	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGCGGTGGCTGACG	-14491755	True	NA	NA	False	AATAGA	-43	NA	14496127	14426469	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14426498_14477763_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492916_14496042
WTC11_00046386	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_8	170.087293764114	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491755	True	NA	-2	True	CATAAA	-17	NA	14496127	14477761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
WTC11_00046387	chr19	-	1782	7	FSM	ENSG00000123159.16	ENST00000345425.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	280.562777684821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491760	True	NA	-2	True	CATAAA	-17	NA	14496132	14477761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14496036
WTC11_00046391	chr19	-	252	1	FSM	ENSG00000123159.16	ENST00000587811.1	1717	1	1219	246	1201	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCCAGATACGAGATGC	-14482169	False	NA	NA	False	NA	NA	NA	14482244	14481992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14482000_14482200
WTC11_00046392	chr19	-	2479	2	FSM	ENSG00000132002.9	ENST00000677204.1	2623	2	159	-15	28	1	multi-exon	FALSE	canonical	3	875	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGTCCTGTGACTCT	-14513441	False	NA	-3	True	ATTAAA	-20	NA	14517541	14514767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465
WTC11_00046393	chr19	-	2229	3	FSM	ENSG00000132002.9	ENST00000598235.2	2215	3	0	-14	0	1	multi-exon	FALSE	canonical	2	28	junction_2	423.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGTCCTGTGACTCT	-14513735	False	NA	-3	True	ATTAAA	-20	NA	14517835	14514767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465_14517047_14517590
WTC11_00046394	chr19	-	2243	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	-1	0	1	multi-exon	FALSE	canonical	3	875	junction_1	47	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGTCCTGTGACTCT	-14514297	True	NA	-3	True	ATTAAA	-20	NA	14518397	14514767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465_14517047_14518138
WTC11_00046395	chr19	-	2548	2	FSM	ENSG00000132002.9	ENST00000595139.2	2534	2	0	-14	0	1	multi-exon	FALSE	canonical	3	969	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGTCCTGTGACTCT	-14514307	True	NA	-3	True	ATTAAA	-20	NA	14518407	14514767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14517047_14518138
WTC11_00046396	chr19	-	654	4	NNC	ENSG00000099795.7	novel	535	3	NA	NA	-88	38912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1404.81560672171	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATATTTTTCTGGTG	-14572131	False	NA	NA	False	AATGAA	-44	NA	14572154	14527165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14527197_14566077_14566266_14566764_14566934_14571888
WTC11_00046397	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2899	junction_2	78	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-14538187	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14566266_14566764_14566934_14571888
WTC11_00046398	chr19	-	1786	1	FSM	ENSG00000269378.1	ENST00000596032.1	609	1	-1077	-100	-1077	100	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCAGGAGTTTTAGACC	NA	False	NA	NA	False	NA	NA	NA	14623319	14621533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14621500_14623300
WTC11_00046399	chr19	-	425	4	FSM	ENSG00000127507.18	ENST00000598500.1	887	4	0	462	0	-462	multi-exon	FALSE	canonical	3	7	junction_2	0.816496580927726	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCACCCCACATCC	-14776768	True	NA	NA	False	AAAACA	-32	NA	14776826	14772341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14772498_14773937_14774055_14774255_14774307_14776725
WTC11_00046400	chr19	-	227	1	ISM	ENSG00000127530.4	ENST00000641666.1	11711	5	42778	3021	7704	-3021	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCCCAAGCAGAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	14792507	14792280	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14792300_14792500
WTC11_00046401	chr19	-	2420	10	FSM	ENSG00000105143.13	ENST00000594383.2	2420	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	17.3205080756888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTCTCTGTTTCTCT	-14979345	True	NA	NA	False	AATAAA	-20	NA	14979864	14950032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
WTC11_00046402	chr19	-	2190	6	FSM	ENSG00000105143.13	ENST00000544886.6	2420	6	225	5	-209	-5	multi-exon	FALSE	canonical	3	13	junction_5	16.9162643630324	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGTTTTGAAATATCT	NA	False	NA	-3	True	AATAAA	-25	NA	14980073	14961314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979512
WTC11_00046403	chr19	-	4260	10	FSM	ENSG00000105135.16	ENST00000533086.5	4248	10	0	-12	0	12	multi-exon	FALSE	canonical	3	417	junction_7	30.4355218068349	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATATTTATTTATTAT	-15124024	False	NA	2	True	AATAAA	-44	NA	15124034	15114971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15115922_15116000_15116072_15116151_15116322_15116407_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15123031_15123115_15123244_15123374
WTC11_00046404	chr19	-	2308	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	-3	0	0	multi-exon	FALSE	canonical	3	315	junction_15	53.8274609800198	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCAGAACCTGTGCATA	-15123470	True	NA	-10	True	AATAAA	-32	NA	15125786	15114983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
WTC11_00046405	chr19	-	2231	15	ISM	ENSG00000105135.16	ENST00000263383.8	2305	16	662	-2	-29	-1	3prime_fragment	FALSE	canonical	3	417	junction_10	35.2632230228489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCAGAACCTGTGCAT	-15125114	False	2316	-11	True	AATAAA	-31	NA	15125124	15114984	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924
WTC11_00046406	chr19	-	2460	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	108.997736979566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCAGAACCTGTGCAT	-15123347	True	NA	-11	True	AATAAA	-31	NA	15125663	15114984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
WTC11_00046414	chr19	-	8676	33	FSM	ENSG00000074181.9	ENST00000263388.7	8680	33	0	4	0	-4	multi-exon	FALSE	canonical	3	186	junction_17	57.3213171380203	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTCGGTGGGTTTCT	-15196572	True	NA	NA	False	AATAAA	-16	NA	15200995	15159041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15161715_15162464_15162563_15165367_15165516_15165786_15166092_15167248_15167412_15170085_15170171_15170330_15170554_15170670_15170826_15174067_15174401_15177524_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184294_15184451_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
WTC11_00046415	chr19	-	7935	32	NIC	ENSG00000074181.9	novel	8680	33	NA	NA	-4	-593	combination_of_known_junctions	FALSE	canonical	3	65	junction_17	65.993693136685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGGTCTGTGTCTAGG	-15196576	True	NA	1	True	AATAAA	-20	NA	15200999	15159630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15161715_15162464_15162563_15165367_15165516_15165786_15166092_15167248_15167412_15170085_15170171_15170330_15170554_15170670_15170826_15174067_15174401_15177524_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
WTC11_00046419	chr19	-	1838	7	FSM	ENSG00000105131.8	ENST00000221730.8	1838	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_6	21.2896688560438	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15229806	True	NA	-3	True	AATACA	-25	NA	15232448	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
WTC11_00046420	chr19	-	1807	8	FSM	ENSG00000105131.8	ENST00000435261.5	1771	8	-33	-3	-33	0	multi-exon	FALSE	canonical	3	64	junction_7	53.6188361663766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15233053	False	NA	-3	True	AATACA	-25	NA	15233080	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919
WTC11_00046421	chr19	-	1811	9	FSM	ENSG00000105131.8	ENST00000602233.5	1805	9	0	-6	0	0	multi-exon	FALSE	canonical	3	34	junction_8	71.0447702156886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15233408	False	NA	-3	True	AATACA	-25	NA	15233435	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919_15233001_15233351
WTC11_00046422	chr19	-	2419	8	NNC	ENSG00000105131.8	novel	1805	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_7	73.2134146289644	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15233408	False	NA	-3	True	AATACA	-25	NA	15233435	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15233001_15233406
WTC11_00046423	chr19	-	1687	8	NNC	ENSG00000105131.8	novel	1771	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	63.166446789415	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15229798	True	NA	-3	True	AATACA	-25	NA	15232440	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232399
WTC11_00046424	chr19	-	1902	6	NIC	ENSG00000105131.8	novel	1805	9	NA	NA	38	0	intron_retention	FALSE	canonical	3	174	junction_5	23.1032465251098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCTGTATTTCA	-15229768	True	NA	-9	True	AATACA	-19	NA	15232410	15226924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
WTC11_00046425	chr19	-	7223	20	FSM	ENSG00000141867.19	ENST00000679869.1	7231	20	8	0	8	0	multi-exon	TRUE	canonical	2	3	junction_6	351.19103245134	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTGATGGCTGCTT	-15320631	True	NA	53	True	AATAAA	-24	NA	15332531	15235518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15238446_15238742_15238981_15239058_15239265_15239391_15239523_15239658_15239822_15239909_15240023_15242899_15243488_15244230_15244601_15244709_15244763_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
WTC11_00046426	chr19	-	4611	13	NNC	ENSG00000141867.19	novel	4624	12	NA	NA	0	2714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.095252686289	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGTGCCAAGTGGA	-15320543	False	NA	NA	False	NA	NA	NA	15332443	15241808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15241831_15247047_15249291_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
WTC11_00046432	chr19	-	3546	15	NNC	ENSG00000105127.10	novel	3715	15	NA	NA	0	48361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.9230799459113	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCTTAATTTTAATGT	-15375262	True	NA	NA	False	NA	NA	NA	15379785	15305023	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15305044_15353521_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
WTC11_00046435	chr19	-	3657	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	8	0	7	multi-exon	FALSE	canonical	3	203	junction_13	14.9555554578643	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAACATCACTAGTGG	-15375264	True	NA	NA	False	ATTAAA	-9	NA	15379787	15353392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
WTC11_00046436	chr19	-	4318	14	FSM	ENSG00000105127.10	ENST00000680336.1	4311	14	0	-7	0	7	multi-exon	FALSE	canonical	3	18	junction_6	76.2228902238877	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAACATCACTAGTGG	-15375264	True	NA	NA	False	ATTAAA	-9	NA	15379787	15353392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
WTC11_00046437	chr19	-	3843	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	-128	0	7	multi-exon	FALSE	canonical	3	18	junction_6	74.1124696880714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAACATCACTAGTGG	-15375292	True	NA	NA	False	ATTAAA	-9	NA	15379815	15353392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
WTC11_00046439	chr19	-	3930	13	FSM	ENSG00000011243.19	ENST00000595879.6	3907	13	0	-23	0	0	multi-exon	FALSE	canonical	2	592	junction_5	125.546886991806	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408773	True	NA	-10	True	AATAAA	-15	NA	15418969	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046441	chr19	-	2078	14	FSM	ENSG00000011243.19	ENST00000397410.10	2078	14	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_5	121.209535430551	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408792	True	NA	-10	True	AATAAA	-15	NA	15418988	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046442	chr19	-	2113	16	FSM	ENSG00000011243.19	ENST00000609519.5	2113	16	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_6	263.308150694623	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408792	True	NA	-10	True	AATAAA	-15	NA	15418988	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046443	chr19	-	2784	14	FSM	ENSG00000011243.19	ENST00000593845.5	2749	14	-34	-1	0	0	multi-exon	FALSE	canonical	2	224	junction_5	197.311545921282	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408826	True	NA	-10	True	AATAAA	-15	NA	15419022	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046444	chr19	-	2406	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	-16	0	0	multi-exon	FALSE	canonical	3	592	junction_5	112.76006976467	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408826	True	NA	-10	True	AATAAA	-15	NA	15419022	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
WTC11_00046445	chr19	-	2018	15	FSM	ENSG00000011243.19	ENST00000680649.1	2002	15	0	-16	0	0	multi-exon	FALSE	canonical	2	383	junction_11	167.70955517787	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408834	True	NA	-10	True	AATAAA	-15	NA	15419030	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046446	chr19	-	2189	16	FSM	ENSG00000011243.19	ENST00000594594.6	2251	16	62	0	-15	0	multi-exon	FALSE	canonical	2	74	junction_12	300.621681778869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15419048	False	NA	-10	True	AATAAA	-15	NA	15419059	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046447	chr19	-	2057	14	FSM	ENSG00000011243.19	ENST00000679638.1	2057	14	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_3	246.321817689425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408848	True	NA	-10	True	AATAAA	-15	NA	15419044	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397204_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046448	chr19	-	3018	13	FSM	ENSG00000011243.19	ENST00000680703.1	2995	13	0	-23	0	0	multi-exon	FALSE	canonical	2	592	junction_5	124.936539446588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408848	True	NA	-10	True	AATAAA	-15	NA	15419044	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046451	chr19	-	4308	13	FSM	ENSG00000011243.19	ENST00000681405.1	4308	13	0	0	0	0	multi-exon	FALSE	canonical	2	383	junction_9	167.668882523462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408830	True	NA	-46	True	NA	NA	NA	15419026	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046452	chr19	-	3654	13	FSM	ENSG00000011243.19	ENST00000680774.1	3654	13	0	0	0	0	multi-exon	FALSE	canonical	2	224	junction_5	205.170457587506	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046453	chr19	-	3119	14	FSM	ENSG00000011243.19	ENST00000680103.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_6	262.49384326395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046454	chr19	-	2187	15	FSM	ENSG00000011243.19	ENST00000680303.1	2172	15	-15	0	-15	0	multi-exon	FALSE	canonical	2	37	junction_6	277.530298033441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15419048	False	NA	-46	True	NA	NA	NA	15419059	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046457	chr19	-	3544	13	FSM	ENSG00000011243.19	ENST00000681744.1	3544	13	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_10	99.460908010244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046458	chr19	-	3070	14	FSM	ENSG00000011243.19	ENST00000680302.1	3056	14	22	-36	0	0	multi-exon	FALSE	canonical	2	37	junction_6	287.909029847026	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408826	True	NA	-10	True	AATAAA	-15	NA	15419022	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046459	chr19	-	4863	11	FSM	ENSG00000011243.19	ENST00000680323.1	4863	11	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_8	105.079208219324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00046462	chr19	-	550	1	FSM	ENSG00000279203.1	ENST00000624655.1	631	1	233	-152	233	152	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGCCTTTTGGATTTC	NA	False	NA	NA	False	AATGAA	-21	NA	15383599	15383049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15383000_15383600
WTC11_00046464	chr19	-	6291	9	FSM	ENSG00000011451.21	ENST00000674001.1	6356	9	5	60	5	-60	multi-exon	TRUE	canonical	3	29	junction_8	37.4080121765378	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAGAAATCAACAATATC	-15431215	True	NA	NA	False	NA	NA	NA	15432756	15420037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15428109_15428509_15429585_15430090_15431011_15431183_15432433
WTC11_00046465	chr19	-	5892	8	FSM	ENSG00000011451.21	ENST00000674089.4	5957	8	5	60	5	-60	multi-exon	FALSE	canonical	3	26	junction_5	40.663878570645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAGAAATCAACAATATC	-15431215	True	NA	NA	False	NA	NA	NA	15432756	15420037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15429585_15430090_15431011_15431183_15432433
WTC11_00046466	chr19	-	6304	11	FSM	ENSG00000011451.21	ENST00000643092.1	6299	11	-5	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	49.9463712395605	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGGCGGCCAGCGTG	-15449787	True	NA	-14	True	ATTAAA	-21	NA	15449956	15422090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15429585_15430090_15436805_15437130_15438577_15440716_15442675_15442749_15448102_15448368_15449797
WTC11_00046468	chr19	-	855	1	FSM	ENSG00000267218.2	ENST00000593183.2	939	1	29	55	29	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAGCGTTCCACCTAC	NA	False	NA	NA	False	NA	NA	NA	15903209	15902354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15902400_15903200
WTC11_00046470	chr19	-	2812	24	Fusion	ENSG00000127527.14_ENSG00000277825.1	novel	2924	23	NA	NA	0	-302	multi-exon	FALSE	non_canonical	0	0	junction_1	63.6434420240248	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGCAGTGGCTCATG	-16468923	True	NA	NA	False	AAAAAG	-1	NA	16471943	16352763	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_16352791_16361577_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046471	chr19	-	3089	23	FSM	ENSG00000127527.14	ENST00000602022.5	3082	23	0	-7	0	7	multi-exon	FALSE	canonical	3	29	junction_1	53.486558904748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCTGTAAACATTGTT	-16468941	True	NA	NA	False	TATAAA	-32	NA	16471961	16355231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16355852_16361778_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046472	chr19	-	2873	22	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_1	31.4863826161316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468946	True	NA	NA	False	TATAAA	-42	NA	16471966	16355246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046473	chr19	-	3221	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	-5	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	59.85616028769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468955	True	NA	NA	False	TATAAA	-42	NA	16471975	16355246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046474	chr19	-	2878	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	50	-4	50	2	multi-exon	FALSE	canonical	3	53	junction_1	48.4370811098923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGCTCTATCATAAG	-16469015	True	NA	-17	True	AATAAA	-18	NA	16472035	16361576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046476	chr19	-	2684	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	-18	0	0	multi-exon	FALSE	canonical	3	63	junction_1	37.6890848944546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	-16468956	True	NA	-19	True	AATAAA	-16	NA	16471976	16361578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00046480	chr19	-	4064	18	NNC	ENSG00000085872.15	novel	4075	17	NA	NA	0	24351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.793567193179	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTTCAAGAGAGCTA	-16532826	True	NA	NA	False	NA	NA	NA	16542400	16493542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_16493568_16517892_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
WTC11_00046481	chr19	-	4080	18	NNC	ENSG00000085872.15	novel	4075	17	NA	NA	0	24351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.793567193179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTTCAAGAGAGCTA	-16532841	True	NA	NA	False	NA	NA	NA	16542415	16493542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_16493568_16517891_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
WTC11_00046482	chr19	-	4086	17	FSM	ENSG00000085872.15	ENST00000198939.6	4084	17	0	-2	0	0	multi-exon	FALSE	canonical	3	29	junction_12	130.285743656012	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	-16532841	True	NA	-12	True	AATAAA	-16	NA	16542415	16517893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530914_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
WTC11_00046483	chr19	-	4157	17	FSM	ENSG00000085872.15	ENST00000546361.7	4075	17	0	-82	0	82	multi-exon	FALSE	canonical	3	434	junction_3	51.9256905948298	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCAGAGGCCGTGTCCA	-16532863	True	NA	70	True	NA	NA	NA	16542437	16517811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
WTC11_00046485	chr19	-	1429	4	FSM	ENSG00000085872.15	ENST00000546538.1	1429	4	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	43.7340447096615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAGAAAAAAAAAAC	-16542172	False	126	NA	False	NA	NA	NA	16542209	16531983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16532750_16533010_16533149_16535451_16535637_16541869
WTC11_00046487	chr19	-	5136	6	FSM	ENSG00000127526.15	ENST00000595753.6	5126	6	0	-10	0	4	multi-exon	FALSE	canonical	3	85	junction_3	19.5489130132598	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGATTTGTCAGCGAGGG	-16571426	True	NA	-5	True	AATAAA	-28	NA	16572415	16549826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943
WTC11_00046488	chr19	-	552	2	FSM	ENSG00000127526.15	ENST00000470077.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAACTTTGCCCAG	-16565602	False	NA	NA	False	NA	NA	NA	16566591	16555348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16555841_16566531
WTC11_00046489	chr19	-	1064	4	FSM	ENSG00000127526.15	ENST00000488894.1	1905	4	0	841	0	-841	multi-exon	FALSE	canonical	3	85	junction_1	21.2968437932844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGTAACTGGGACTGCA	-16571220	False	NA	NA	False	GGGGCT	-22	NA	16572209	16566068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16566658_16568031_16568170_16571511_16571583_16571943
WTC11_00046490	chr19	-	3744	1	FSM	ENSG00000105085.11	ENST00000597244.1	3871	1	125	2	125	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTGAGAATCTTTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	16578652	16574908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16574900_16578700
WTC11_00046491	chr19	-	3185	3	FSM	ENSG00000105085.11	ENST00000263390.8	3172	3	0	-13	0	1	multi-exon	FALSE	canonical	3	66	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGAATCTTTTCTCAT	-16626752	True	NA	NA	False	AATAAA	-30	NA	16628204	16574905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16577683_16578334_16578410_16627871
WTC11_00046492	chr19	-	1301	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	-20	0	20	multi-exon	FALSE	canonical	3	63	junction_1	296.788961216552	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGGTGTATATAGTATT	-16651479	True	NA	0	True	AATAAA	-27	NA	16660130	16630730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
WTC11_00046493	chr19	-	1126	6	FSM	ENSG00000214046.9	ENST00000481671.6	1126	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	249.797838261263	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTCATTGAGGACGAAC	-16651479	True	NA	NA	False	NA	NA	NA	16660130	16630996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16631725_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046494	chr19	-	1076	5	FSM	ENSG00000214046.9	ENST00000594662.5	1076	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	267.642835697128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTCCAAGCACAAAAGAC	-16659947	False	NA	NA	False	NA	NA	NA	16660066	16631042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16631725_16647119_16647262_16654034_16654126_16659394_16659448_16659958
WTC11_00046496	chr19	-	1449	1	FSM	ENSG00000269044.2	ENST00000598112.2	1473	1	14	10	14	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAATGTATATAGTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	16635255	16633806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16633800_16635300
WTC11_00046497	chr19	-	2190	6	FSM	ENSG00000214046.9	ENST00000487803.5	2190	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	320.307352397662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAGTAAGTGGAATTT	-16651479	True	NA	NA	False	NA	NA	NA	16660130	16645660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16652604_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046498	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	34.3611335668659	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046499	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	212.5338561265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046500	chr19	-	1145	6	FSM	ENSG00000214046.9	ENST00000599310.5	1123	6	0	-22	0	0	multi-exon	FALSE	canonical	3	151	junction_1	214.908910936704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATTTGCTTGTTGA	-16660323	False	NA	-40	True	AATGAA	-30	NA	16660442	16646341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647119_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046501	chr19	-	1267	4	FSM	ENSG00000214046.9	ENST00000597711.5	1075	4	2	-194	0	0	multi-exon	FALSE	canonical	3	179	junction_1	250.221679494182	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651491	True	NA	-1	True	AATAAA	-19	NA	16660142	16646147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16659394_16659448_16659958_16660001_16660084
WTC11_00046502	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	270.613539018283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-16651493	True	NA	-39	True	NA	NA	NA	16660144	16646587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
WTC11_00046504	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	263.923639524769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-16651491	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
WTC11_00046507	chr19	-	2784	19	ISM	ENSG00000160111.15	ENST00000443236.7	5983	42	-5	64567	0	29	5prime_fragment	FALSE	canonical	2	8	junction_2	8.52610370828577	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTCCTCAGGGGACTAC	-17026440	True	NA	23	True	NA	NA	NA	17026815	16957517	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_16957916_16970890_16971034_16975096_16975259_16976001_16976152_16977367_16977541_16980496_16980687_16989642_16989772_16993415_16993587_16997110_16997339_17000413_17000523_17002265_17002351_17004272_17004387_17008504_17008560_17009302_17009321_17011463_17011517_17011591_17011758_17020330_17020354_17022029_17022182_17026550
WTC11_00046508	chr19	-	1421	11	FSM	ENSG00000131351.15	ENST00000253669.10	1407	11	0	-14	0	14	multi-exon	FALSE	canonical	3	250	junction_7	17.9398996652713	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCTTCTGGATGACTG	-17072000	True	NA	15	True	NA	NA	NA	17075452	17049714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
WTC11_00046509	chr19	-	2991	10	FSM	ENSG00000131351.15	ENST00000593360.1	3176	10	185	0	185	0	multi-exon	FALSE	canonical	3	250	junction_7	18.6785676348292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	-17074975	False	NA	-36	True	AGTAAA	-13	NA	17075015	17049765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273
WTC11_00046510	chr19	-	1221	10	NIC	ENSG00000131351.15	novel	1545	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	106.343259724765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	-17071991	True	NA	-31	True	AGTAAA	-18	NA	17075443	17049760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
WTC11_00046511	chr19	-	1585	11	FSM	ENSG00000131351.15	ENST00000448593.6	1545	11	6	-46	6	14	multi-exon	FALSE	canonical	3	45	junction_7	73.7054272085849	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCTTCTGGATGACTG	-17075579	True	NA	15	True	NA	NA	NA	17075619	17049714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
WTC11_00046514	chr19	-	2408	5	NNC	ENSG00000160113.6	novel	2383	4	NA	NA	0	84210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	390.448059926029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATAGTGTCTGGGCG	-17242573	True	NA	NA	False	NA	NA	NA	17245919	17147672	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17147704_17231888_17232627_17235498_17236066_17240670_17240766_17244942
WTC11_00046515	chr19	-	2440	5	NNC	ENSG00000160113.6	novel	2383	4	NA	NA	-28	84210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	390.448059926029	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATAGTGTCTGGGCG	-17242601	True	NA	NA	False	NA	NA	NA	17245947	17147672	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17147702_17231882_17232627_17235498_17236066_17240670_17240766_17244942
WTC11_00046516	chr19	-	2435	6	NNC	ENSG00000160113.6	novel	2383	4	NA	NA	0	62080	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	415.054502445161	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGACAGGATTGAGAT	-17242573	True	NA	NA	False	NA	NA	NA	17245919	17169802	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17169832_17174022_17174048_17231884_17232627_17235498_17236066_17240670_17240766_17244942
WTC11_00046517	chr19	-	2383	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_3	252.021604012213	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	-17242573	True	NA	-5	True	AATAAA	-20	NA	17245919	17231882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
WTC11_00046518	chr19	-	3321	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	-36	4	-28	-4	multi-exon	FALSE	canonical	3	28	junction_9	8.1967981553775	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGGGAGACTGAAGC	-17263877	True	NA	-16	True	AATAAA	-24	NA	17264781	17249174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
WTC11_00046519	chr19	-	577	4	FSM	ENSG00000130307.12	ENST00000594190.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.2685791225499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACACTCTGAGCTCCC	-17263820	True	NA	NA	False	NA	NA	NA	17264724	17262828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17262991_17264001_17264151_17264245_17264348_17264560
WTC11_00046520	chr19	-	436	3	FSM	ENSG00000130307.12	ENST00000600286.1	598	3	0	162	0	105	multi-exon	FALSE	canonical	2	5	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACCCGCTTGGTCTGT	-17263841	True	NA	NA	False	NA	NA	NA	17264745	17264001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17264151_17264245_17264348_17264560
WTC11_00046521	chr19	-	2043	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	-1	0	1	multi-exon	FALSE	canonical	3	115	junction_1	18.1727818453862	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGACCTGTGCTGGGT	-17302010	True	NA	-1	True	AATAAA	-19	NA	17303425	17292129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
WTC11_00046522	chr19	-	2152	1	FSM	ENSG00000269815.1	ENST00000594077.1	500	1	-581	-1071	-581	1071	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	-17297266	False	NA	NA	False	NA	NA	NA	17297276	17295124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17295100_17297300
WTC11_00046523	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	211.472614460281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398770	True	NA	-6	True	AATAAA	-29	NA	17405575	17402938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
WTC11_00046524	chr19	-	998	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	3	0	-3	multi-exon	FALSE	canonical	3	447	junction_2	35.3624094201738	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCGAGTTCCTGGAG	-17398825	True	NA	-9	True	AATAAA	-26	NA	17405630	17402941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
WTC11_00046526	chr19	-	2051	3	FSM	ENSG00000188051.7	ENST00000341130.6	2031	3	-22	2	-22	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGTGTTACTCAATG	-17448647	True	NA	-4	True	AGTAAA	-14	NA	17448690	17435510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17436928_17445198_17445285_17448142
WTC11_00046527	chr19	-	9957	41	NNC	ENSG00000130477.16	novel	9985	44	NA	NA	0	7	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_39	14.6853668663742	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGTTGCCTCCTCCT	-17684809	True	NA	-5	True	ATTAAA	-27	NA	17688365	17601328	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672492_17674656_17674757_17688177
WTC11_00046528	chr19	-	5200	40	FSM	ENSG00000130477.16	ENST00000550896.1	5200	40	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	15.9916562728335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTCGGCCGAGCGGCA	-17684809	True	NA	NA	False	NA	NA	NA	17688365	17606050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17676011_17676042_17688177
WTC11_00046531	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	7.94905654779232	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-18202613	True	NA	-8	True	AATAAA	-32	NA	18204042	18196783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
WTC11_00046533	chr19	-	1895	2	NNC	ENSG00000130522.6	novel	500	2	NA	NA	0	38440	intron_retention	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAGAAAAAAGAAAGAA	-18274951	True	NA	NA	False	AAAACA	-1	NA	18281622	18241253	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18241285_18279758
WTC11_00046534	chr19	-	211	2	FSM	ENSG00000284797.1	ENST00000600667.2	702	2	270	221	270	-221	multi-exon	FALSE	canonical	3	7	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACCGGAATGAGTCCAA	-18252131	False	NA	NA	False	NA	NA	NA	18252161	18250359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18250473_18252063
WTC11_00046535	chr19	-	1931	1	FSM	ENSG00000130522.6	ENST00000252818.5	1929	1	-29	27	-29	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGCTGGGCGGGGCCTGG	NA	False	NA	32	True	NA	NA	NA	18281651	18279720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18279700_18281700
WTC11_00046536	chr19	-	1723	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	-21	2	0	-2	multi-exon	FALSE	canonical	3	3870	junction_4	489.804744260404	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTTTCTTGAGTCTT	-18273735	True	NA	-8	True	AATAAA	-18	NA	18323097	18306237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
WTC11_00046537	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	2212.99179091714	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	-18273709	True	NA	-9	True	AATAAA	-26	NA	18323071	18306906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
WTC11_00046539	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_3	557.795661510557	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	-18273750	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
WTC11_00046541	chr19	-	2039	8	FSM	ENSG00000105655.19	ENST00000582811.6	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	296.346529094104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425080	True	NA	-18	True	AATAAA	-13	NA	18438111	18434387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859
WTC11_00046542	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_8	144.969651996547	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425102	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
WTC11_00046543	chr19	-	1484	9	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	281.251416663099	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425082	True	NA	-35	True	AATAAA	-27	NA	18438113	18434808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437598_18437761_18437859_18437989_18438092
WTC11_00046544	chr19	-	1666	10	FSM	ENSG00000105655.19	ENST00000582770.6	1654	10	0	-12	0	0	multi-exon	FALSE	canonical	3	12	junction_6	287.915496862071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425131	True	NA	-35	True	AATAAA	-27	NA	18438162	18434808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436972_18437106_18437598_18437761_18437859_18437989_18438092
WTC11_00046545	chr19	-	2161	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	-13	0	0	multi-exon	FALSE	canonical	3	603	junction_6	153.496742636448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425133	True	NA	-35	True	AATAAA	-27	NA	18438164	18434808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
WTC11_00046546	chr19	-	1781	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	-124	46	-124	6	multi-exon	FALSE	canonical	3	88	junction_8	264.079299724931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCCCCCACAAATAAA	NA	False	NA	-81	True	NA	NA	NA	18438291	18434854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
WTC11_00046551	chr19	-	3974	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	3	-7	0	7	multi-exon	FALSE	canonical	3	72	junction_8	13.00349603341	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGCTGCCTGGCTGGT	-18519898	True	NA	9	True	AATAAA	-23	NA	18522067	18442655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
WTC11_00046553	chr19	-	1755	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	11	-10	11	0	multi-exon	FALSE	canonical	3	880	junction_8	957.990442280089	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18542935	False	NA	1	True	AATAAA	-27	NA	18542961	18531751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
WTC11_00046554	chr19	-	1720	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1184.99818037835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519047	True	NA	1	True	AATAAA	-27	NA	18543524	18531751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
WTC11_00046555	chr19	-	1772	9	FSM	ENSG00000105701.16	ENST00000608443.6	1761	9	0	-11	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1122.13042356938	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519096	True	NA	1	True	AATAAA	-27	NA	18543573	18531751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543485
WTC11_00046556	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1697.83773076228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519096	True	NA	1	True	AATAAA	-27	NA	18543573	18531751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
WTC11_00046564	chr19	-	1768	9	FSM	ENSG00000006016.12	ENST00000684169.1	1746	9	-22	0	-22	0	multi-exon	FALSE	canonical	3	44	junction_2	31.388692231439	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18604948	True	NA	-10	True	AATAAA	-17	NA	18606821	18593236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18593580_18594064_18594113_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
WTC11_00046565	chr19	-	2577	8	FSM	ENSG00000130283.9	ENST00000247005.8	2579	8	0	2	0	-2	multi-exon	FALSE	canonical	3	38	junction_2	66.4293394732865	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTGGTCTCCTTGGACT	-18894873	True	NA	-10	True	AATAAA	-16	NA	18896158	18868546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18869391_18869982_18870620_18878929_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
WTC11_00046566	chr19	-	2094	6	FSM	ENSG00000223802.9	ENST00000429504.6	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	17.6567267634746	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	-18894850	True	NA	-1	True	AATAAA	-22	NA	18896135	18877908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
WTC11_00046567	chr19	-	757	5	FSM	ENSG00000223802.9	ENST00000596048.1	749	5	0	-8	0	0	multi-exon	FALSE	canonical	3	102	junction_1	41.4389611356269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	NA	False	NA	-1	True	AATAAA	-22	NA	18884233	18877908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086
WTC11_00046568	chr19	-	1276	7	NIC	ENSG00000223802.9	novel	2094	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	36.8103246386119	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAAGACTTTTGGCTCG	-18894872	True	NA	-10	True	AATAAA	-13	NA	18896157	18877917	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
WTC11_00046569	chr19	-	261	2	FSM	ENSG00000105669.14	ENST00000600528.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18899881	False	43	-2	True	AATAAA	-29	NA	18899937	18899513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899710_18899872
WTC11_00046571	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_7	215.521131271835	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18897785	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00046572	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	792.144074253541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	-18897761	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00046574	chr19	-	917	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	-10	0	0	multi-exon	FALSE	canonical	3	126	junction_6	849.074900995195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-18897773	True	NA	-51	True	NA	NA	NA	18919375	18899562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
WTC11_00046575	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1049.06484070338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-18897778	True	NA	-51	True	NA	NA	NA	18919380	18899562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00046577	chr19	-	1566	10	FSM	ENSG00000051128.19	ENST00000392351.8	1560	10	0	-6	0	4	multi-exon	FALSE	canonical	3	152	junction_9	57.8964593045205	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTATGTGGGTAT	-18938826	True	NA	2	True	NA	NA	NA	18941217	18929196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941050
WTC11_00046579	chr19	-	866	8	FSM	ENSG00000051128.19	ENST00000596482.5	866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	109.402085567555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGGTGAGAAGGAGGGG	-18938870	True	NA	NA	False	NA	NA	NA	18941261	18931585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941192
WTC11_00046582	chr19	-	747	6	FSM	ENSG00000064607.17	ENST00000593795.5	747	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	184.549180437086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	-19001662	False	NA	-6	True	AATAAA	-21	NA	19001674	18990887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18993637_18993741_18994365_18994487_18995143_18995281_18998923_18998986_19001612
WTC11_00046584	chr19	-	3645	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	-5	0	0	multi-exon	FALSE	canonical	3	413	junction_10	34.4557687477729	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	-19026237	True	NA	-6	True	AATAAA	-21	NA	19033559	18990887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
WTC11_00046585	chr19	-	6257	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	-63	-5	-21	0	multi-exon	FALSE	canonical	3	129	junction_1	109.305123393188	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	-19026258	True	NA	-6	True	AATAAA	-21	NA	19033580	18990887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
WTC11_00046589	chr19	-	2251	12	FSM	ENSG00000064545.15	ENST00000162044.14	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	36.8591242614677	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-19132988	True	NA	NA	False	NA	NA	NA	19138478	19119168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
WTC11_00046590	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_10	37.8549864614954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
WTC11_00046591	chr19	-	1665	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	-11	0	0	multi-exon	FALSE	canonical	3	4	junction_8	86.5616867894492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAAAGGAGCATGCC	-19132957	True	NA	-35	True	NA	NA	NA	19138447	19119648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
WTC11_00046594	chr19	-	1411	9	FSM	ENSG00000213999.17	ENST00000424583.7	1425	9	14	0	-1	0	multi-exon	TRUE	canonical	0	0	junction_8	10.558616149856	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-19170188	False	NA	-3	True	AATAAA	-26	NA	19170249	19145566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19170204
WTC11_00046595	chr19	-	1809	13	FSM	ENSG00000064489.23	ENST00000602804.5	1804	13	0	-5	0	2	multi-exon	FALSE	canonical	3	18	junction_5	58.4586154661759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-19188927	True	NA	-3	True	AATAAA	-26	NA	19192158	19145566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
WTC11_00046596	chr19	-	708	7	FSM	ENSG00000064489.23	ENST00000602276.5	708	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	11.5578256317239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCTCTTCTCACCAAG	-19179116	False	NA	NA	False	NA	NA	NA	19182347	19146867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182293
WTC11_00046597	chr19	-	554	7	FSM	ENSG00000064489.23	ENST00000602689.1	554	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	69.9086705797087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGAGTTCACTGGGTG	-19188891	True	NA	NA	False	NA	NA	NA	19192122	19150685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19150765_19157215_19157284_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
WTC11_00046598	chr19	-	1482	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	30	-520	17	517	multi-exon	FALSE	canonical	3	98	junction_1	28.3379604064936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCACCTCTCAATGTC	-19188891	True	NA	NA	False	NA	NA	NA	19192122	19176385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
WTC11_00046602	chr19	-	1496	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	-7	0	7	multi-exon	FALSE	canonical	3	142	junction_3	14.0079342596338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGCCAGGAGCAGGAA	-19192499	True	NA	-2	True	AATAAA	-20	NA	19192589	19181874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
WTC11_00046603	chr19	-	1582	3	FSM	ENSG00000184162.15	ENST00000537399.1	1565	3	0	-17	0	0	multi-exon	FALSE	canonical	3	158	junction_1	2	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-19201882	True	NA	0	True	TATAAA	-22	NA	19203346	19201408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19202576_19202790_19202882_19203022
WTC11_00046604	chr19	-	926	6	NIC	ENSG00000184162.15	novel	859	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.6917577085136	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-19201947	True	NA	0	True	TATAAA	-22	NA	19203411	19201408	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19201564_19201930_19202048_19202330_19202399_19202469_19202576_19202790_19202882_19203022
WTC11_00046606	chr19	-	711	5	NIC	ENSG00000184162.15	novel	970	4	NA	NA	0	67	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65.8691885482127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCACTGACTTTTTTGG	-19201947	True	NA	NA	False	NA	NA	NA	19203411	19201990	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19202048_19202330_19202399_19202469_19202576_19202790_19202882_19203022
WTC11_00046609	chr19	-	4313	5	FSM	ENSG00000187664.9	ENST00000291481.8	4342	5	26	3	26	-3	multi-exon	FALSE	canonical	3	11	junction_4	22.4165117714599	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTCCTCATTCTTCTG	-19262677	True	NA	NA	False	AATAAA	-13	NA	19262778	19254758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445_19261564_19262729
WTC11_00046610	chr19	-	1108	3	FSM	ENSG00000187664.9	ENST00000592862.2	611	3	-40	-457	-40	457	multi-exon	FALSE	canonical	3	47	junction_1	13.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTACCAACGCTGGTT	-19260654	True	NA	NA	False	NA	NA	NA	19261723	19258388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19258856_19260812_19261176_19261445
WTC11_00046611	chr19	-	1520	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	-2	0	0	multi-exon	FALSE	canonical	3	10	junction_7	6.68515953621837	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCTAAGTGTTTCAG	-19272930	True	NA	-2	True	AGTAAA	-23	NA	19273301	19264363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
WTC11_00046623	chr19	-	2017	1	FSM	ENSG00000178093.14	ENST00000585580.4	1330	1	-88	-599	-88	599	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGCCTCCCGGGTTCA	-19515346	False	NA	NA	False	NA	NA	NA	19515636	19513619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19513600_19515600
WTC11_00046625	chr19	-	2907	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	-1121	0	-411	0	multi-exon	FALSE	canonical	3	54	junction_2	69.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19629147	False	NA	-14	True	AGTAAA	-30	NA	19629341	19623654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19624570_19626542_19627285_19628091
WTC11_00046626	chr19	-	3492	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-423	0	intron_retention	FALSE	canonical	3	89	junction_2	48.7920758593715	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19629159	False	NA	-14	True	AGTAAA	-30	NA	19629353	19623654	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19624570_19626542_19627285_19627396_19627970_19628091
WTC11_00046627	chr19	-	2420	5	ISM	ENSG00000064547.14	ENST00000542587.5	2546	6	401	-15	0	1	intron_retention	FALSE	canonical	0	0	junction_3	68.3264224147584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGTTATCAATTCAG	-19628026	True	NA	-13	True	AGTAAA	-31	NA	19628529	19623653	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091
WTC11_00046628	chr19	-	2560	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.4356632173606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19628736	False	NA	-14	True	AGTAAA	-30	NA	19628930	19623654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
WTC11_00046630	chr19	-	480	2	FSM	ENSG00000064547.14	ENST00000592061.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTGGCGGCCCAAGGAT	-19627606	False	NA	NA	False	NA	NA	NA	19627800	19627208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19627285_19627396
WTC11_00046632	chr19	-	595	2	FSM	ENSG00000064547.14	ENST00000590629.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTATTAGTAGGTAAGAA	-19625924	True	NA	NA	False	NA	NA	NA	19628221	19627504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19627970_19628091
WTC11_00046633	chr19	-	3483	21	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	30	junction_9	20.4006740084733	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGGGTGCATCTCTGC	-19641585	True	NA	-3	True	AATAAA	-14	NA	19643620	19629474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636788_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
WTC11_00046634	chr19	-	3529	21	FSM	ENSG00000089639.11	ENST00000203556.9	3528	21	0	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_8	15.1105095877009	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGGGTGCATCTCTGC	-19641622	True	NA	-3	True	AATAAA	-14	NA	19643657	19629474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
WTC11_00046636	chr19	-	533	4	FSM	ENSG00000089639.11	ENST00000586269.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	45.9879211194515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGGCCCGCGGGCAGCC	-19633505	False	NA	NA	False	NA	NA	NA	19635540	19634110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19634191_19634791_19634930_19635024_19635214_19635414
WTC11_00046637	chr19	-	753	5	FSM	ENSG00000089639.11	ENST00000587713.1	753	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	14.3069039278245	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGTACCCTTTGTGG	-19637443	False	NA	NA	False	NA	NA	NA	19637485	19635091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19635214_19635414_19635722_19636706_19636797_19636916_19637030_19637364
WTC11_00046638	chr19	-	913	8	FSM	ENSG00000089639.11	ENST00000593186.1	910	8	0	-3	0	0	multi-exon	FALSE	canonical	3	30	junction_4	23.3168065864036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGTACCCTTTGTGG	-19638145	False	NA	NA	False	NA	NA	NA	19638187	19635091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19635214_19635414_19635570_19635643_19635722_19636706_19636788_19636916_19637030_19637364_19637562_19637919_19638058_19638158
WTC11_00046640	chr19	-	2425	2	FSM	ENSG00000105726.17	ENST00000467160.1	2431	2	0	6	0	-1	multi-exon	FALSE	canonical	3	568	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCCTGCCTCCACC	NA	False	NA	-8	True	AATAAA	-17	NA	19647711	19645203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645791_19645873
WTC11_00046641	chr19	-	4232	9	FSM	ENSG00000105726.17	ENST00000469641.5	4241	9	8	1	8	-1	multi-exon	FALSE	canonical	3	471	junction_7	33.8895264056611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCCTGCCTCCACC	-19653341	False	NA	-8	True	AATAAA	-17	NA	19653388	19645203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645533_19645646_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19651798_19652594
WTC11_00046642	chr19	-	2442	15	FSM	ENSG00000105726.17	ENST00000497556.5	2442	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	115.651482074907	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCCTGCCTCCACCT	-19655379	False	NA	-7	True	AATAAA	-18	NA	19655451	19645202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654075_19654542_19654701_19655118
WTC11_00046643	chr19	-	4729	16	FSM	ENSG00000105726.17	ENST00000473243.5	4729	16	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	108.901708995875	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCCTGCCTCCACCT	-19656660	False	NA	-7	True	AATAAA	-18	NA	19656732	19645202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645533_19645646_19645986_19646204_19646348_19647128_19647326_19647413_19647760_19649566_19649664_19649740_19651798_19652594_19652721_19653783_19653895_19653968_19654075_19654542_19654701_19655118_19655240_19655315_19655655_19655877_19655934_19656053_19656184_19656659
WTC11_00046644	chr19	-	3860	26	FSM	ENSG00000105726.17	ENST00000357324.11	3849	26	0	-11	0	11	multi-exon	FALSE	canonical	3	372	junction_13	51.906469731624	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGTCTGTGCCACACGG	-19654932	True	NA	9	True	AATAAA	-34	NA	19663676	19645186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
WTC11_00046646	chr19	-	715	4	FSM	ENSG00000105726.17	ENST00000497156.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	166.993679188432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTCCCCCTGCCTTC	-19655379	False	NA	NA	False	NA	NA	NA	19655451	19653776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19653895_19653968_19654075_19654542_19654701_19655118
WTC11_00046647	chr19	-	698	6	FSM	ENSG00000105726.17	ENST00000496082.5	698	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	145.9460174174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTCCCCCTGCCTTC	-19655512	False	NA	NA	False	NA	NA	NA	19655584	19653776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19653895_19653968_19654075_19654542_19654701_19655118_19655240_19655315_19655454_19655527
WTC11_00046648	chr19	-	575	4	FSM	ENSG00000105726.17	ENST00000497762.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	31.2089730686545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGCTGGGGCCTCAG	-19655613	False	NA	NA	False	NA	NA	NA	19655685	19654542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19654701_19655118_19655240_19655315_19655454_19655527
WTC11_00046651	chr19	-	2968	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	-5	0	5	multi-exon	FALSE	canonical	3	51	junction_1	3.39934634239519	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACATTTTTCTTTAAAA	-19732036	True	NA	-24	True	AATAAA	-20	NA	19733112	19710466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
WTC11_00046652	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	13.9283882771841	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-19819942	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
WTC11_00046653	chr19	-	5271	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	-27	-4237	0	0	multi-exon	FALSE	canonical	3	23	junction_1	50.3388517946129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATACTGGAGAGAAACCG	-19819941	True	NA	NA	False	TTTAAA	-32	NA	19821749	19794551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
WTC11_00046659	chr19	-	2604	1	Genic_Genomic	ENSG00000267565.1	novel	NA	NA	NA	NA	-1925	-2736	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCGAGGTGGGCGAAT	-19897737	False	NA	NA	False	NA	NA	NA	19897772	19895168	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_19895200_19897800
WTC11_00046660	chr19	-	2845	1	FSM	ENSG00000197124.12	ENST00000601365.1	3769	1	926	-2	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	NA	False	NA	-3	True	AATAAA	-23	NA	20007262	20004417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20004400_20007300
WTC11_00046662	chr19	-	3246	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	-2	0	2	multi-exon	FALSE	canonical	3	79	junction_1	10.9848380355227	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGCATTGAATTAGG	-20036982	True	NA	-1	True	AATAAA	-25	NA	20039505	20004415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
WTC11_00046664	chr19	-	1590	1	FSM	ENSG00000280079.1	ENST00000624228.1	1590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTCTCTGTCCCTTT	-20222154	False	NA	-17	True	AATAAA	-20	NA	20222186	20220596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20220600_20222200
WTC11_00046665	chr19	-	4665	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	-4047	0	4047	multi-exon	FALSE	canonical	3	66	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	-20217548	True	NA	NA	False	AATAAA	-7	NA	20238431	20223962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20228484_20238287
WTC11_00046666	chr19	-	1070	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	4	0	-4	multi-exon	FALSE	canonical	2	3	junction_2	1.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTCTCTTGATTGGAA	-20424956	False	NA	-3	True	AATAAA	-14	NA	20424969	20340265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20341102_20375959_20376010_20424785
WTC11_00046667	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	43	junction_1	189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-20417119	True	NA	-3	True	ATTAAA	-17	NA	20424959	20340367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20341102_20408949_20409046_20424785
WTC11_00046668	chr19	-	2067	4	NNC	ENSG00000231205.12	novel	737	4	NA	NA	0	-5936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	174.793211157261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATCTCAGTTCACTGTA	-20417116	True	NA	NA	False	NA	NA	NA	20424956	20346299	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_20346345_20397283_20399039_20408949_20409046_20424785
WTC11_00046669	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	35.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	-20417116	True	NA	-12	True	AATAAA	-14	NA	20424956	20395954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20399039_20408949_20409025_20424785
WTC11_00046670	chr19	-	1910	3	FSM	ENSG00000231205.12	ENST00000622273.1	1910	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	66	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGTAACAAAGCTTTAT	-20409949	False	NA	NA	False	AATAAA	-31	NA	20409959	20397333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20399039_20408949_20409025_20409829
WTC11_00046671	chr19	-	737	4	FSM	ENSG00000231205.12	ENST00000600513.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	177.059939631251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGGCAAAGACTTTAA	-20417081	True	NA	NA	False	AAGAAA	-34	NA	20424921	20398657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20399039_20406008_20406133_20408949_20409046_20424785
WTC11_00046672	chr19	-	2375	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	57	-968	0	968	multi-exon	FALSE	canonical	3	381	junction_1	20	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAAGTTTTGTTTTTCA	-20417081	True	NA	NA	False	AATATA	-10	NA	20424921	20403989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409046_20424785
WTC11_00046673	chr19	-	882	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	56	0	12	0	multi-exon	FALSE	canonical	3	72	junction_2	154.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20417069	True	NA	-1	True	AATATA	-18	NA	20424909	20405449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409025_20424785
WTC11_00046676	chr19	-	8340	4	FSM	ENSG00000237440.9	ENST00000427401.9	8352	4	0	12	0	-12	multi-exon	FALSE	canonical	3	33	junction_1	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAATCTTACTCTGCCT	-20563552	True	NA	-11	True	AATAAA	-4	NA	20565781	20538003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20545977_20552474_20552571_20553708_20553836_20565637
WTC11_00046679	chr19	-	6861	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	59	-5797	0	5797	multi-exon	FALSE	canonical	3	61	junction_1	26.5120517668642	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGTTTCCTGTTTC	-20656171	True	NA	-2	True	AATAAA	-18	NA	20661537	20638904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
WTC11_00046680	chr19	-	381	1	FSM	ENSG00000268892.1	ENST00000601088.1	1102	1	40	681	40	-681	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCCTACATATAAGATAA	NA	False	NA	NA	False	NA	NA	NA	21222706	21222325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21222300_21222700
WTC11_00046681	chr19	-	4001	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	3	0	3	0	multi-exon	FALSE	canonical	3	17	junction_3	8.05536398239638	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324722	True	NA	1	True	AATAAA	-25	NA	21329407	21291159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
WTC11_00046683	chr19	-	566	4	FSM	ENSG00000268119.7	ENST00000596705.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	63.1259763400843	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCAGCTCCTGACCGCG	-21460143	True	NA	NA	False	NA	NA	NA	21463908	21444240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21444424_21454382_21454473_21456460_21456589_21463743
WTC11_00046685	chr19	-	2054	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	35	-353	11	-32	multi-exon	FALSE	canonical	3	67	junction_1	35.1883819210577	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAACTCTGTCTCAAAA	-21460108	True	NA	NA	False	NA	NA	NA	21463873	21452071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
WTC11_00046686	chr19	-	4632	2	FSM	ENSG00000268119.7	ENST00000594557.1	4690	2	0	58	0	-58	multi-exon	FALSE	canonical	3	149	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCACTCCAGCCTGGGC	-21460119	True	NA	NA	False	NA	NA	NA	21463884	21452097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21456589_21463743
WTC11_00046690	chr19	-	688	1	FSM	ENSG00000268117.1	ENST00000593697.1	235	1	-83	-370	-83	370	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAACTTATTTCT	NA	False	NA	NA	False	AATACA	-36	NA	21720118	21719430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21719400_21720100
WTC11_00046692	chr19	-	5255	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	-20	0	20	multi-exon	FALSE	canonical	3	66	junction_3	31.0161248385416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGTGGCCGCTCTGC	-21832779	True	NA	NA	False	AATAAA	-21	NA	21836182	21804925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
WTC11_00046693	chr19	-	5272	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	-23	0	20	multi-exon	FALSE	canonical	2	8	junction_3	58.0708379672812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGTGGCCGCTCTGC	-21849430	True	NA	NA	False	AATAAA	-21	NA	21852068	21804925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
WTC11_00046694	chr19	-	3399	7	FSM	ENSG00000198521.12	ENST00000595461.5	3399	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	51.4576416957568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAATTCATTCTGAAG	-21849390	True	NA	NA	False	AATAAA	-16	NA	21852028	21807280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851163_21851904
WTC11_00046695	chr19	-	580	3	FSM	ENSG00000198521.12	ENST00000599906.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATCTAGCTCAACATAA	-21832784	True	NA	NA	False	NA	NA	NA	21836187	21809478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21836035
WTC11_00046696	chr19	-	7451	1	FSM	ENSG00000198521.12	ENST00000593886.1	2051	1	-2725	-2675	-2725	2675	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATTTTTTGATA	-21841734	False	NA	NA	False	AAAACA	-44	NA	21844372	21836921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21836900_21844400
WTC11_00046698	chr19	-	405	1	FSM	ENSG00000236312.3	ENST00000465389.1	354	1	-28	-23	-28	23	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGAGATCATGTGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	22368980	22368575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_22368600_22369000
WTC11_00046699	chr19	-	2192	1	FSM	ENSG00000270479.1	ENST00000604107.1	901	1	-236	-1055	-236	1055	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAACAAATTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	23124324	23122132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23122100_23124300
WTC11_00046700	chr19	-	1807	1	FSM	ENSG00000267920.1	ENST00000601728.1	1224	1	-62	-521	-62	521	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGTTTTGGTACAGAT	NA	False	NA	NA	False	NA	NA	NA	23127854	23126047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23126000_23127900
WTC11_00046701	chr19	-	9378	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	25	-6605	19	6605	multi-exon	FALSE	canonical	3	19	junction_3	11.4697670227235	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGTTGGGTTTAGAC	-23240438	True	NA	-6	True	AATAAA	-10	NA	23250369	23214993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
WTC11_00046702	chr19	-	996	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	55	-468	0	468	multi-exon	FALSE	canonical	3	26	junction_3	7.48331477354788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGGTCCACAGGTGGG	-23271992	True	NA	NA	False	NA	NA	NA	23274196	23259437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
WTC11_00046703	chr19	-	969	5	NNC	ENSG00000284428.1	novel	556	5	NA	NA	9	0	intron_retention	FALSE	canonical	2	7	junction_3	14.7203091000155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTACGCCCTAGTGTGTT	-23272015	True	NA	-6	True	CATAAA	-21	NA	23274219	23259960	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23260117_23260863_23260935_23261619_23261745_23269819_23270293_23274075
WTC11_00046704	chr19	-	538	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	18	0	2	0	multi-exon	FALSE	canonical	3	11	junction_3	13.0838641081295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-23272022	True	NA	-46	True	NA	NA	NA	23274226	23260000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
WTC11_00046708	chr19	-	4224	1	FSM	ENSG00000167232.14	ENST00000597458.1	2307	1	-689	-1228	-689	1228	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCTCTGCTAATAGGAA	NA	False	NA	NA	False	AATAAA	-5	NA	23340826	23336602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23336600_23340800
WTC11_00046709	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4.49691252107735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-23391188	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
WTC11_00046710	chr19	-	2990	7	NNC	ENSG00000269416.7	novel	798	6	NA	NA	0	211	intron_retention	FALSE	canonical	3	21	junction_3	40.1815325187524	3762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCGATTTAGTTGGAGAC	-23411606	True	NA	-5	True	AATAAA	-19	NA	23416047	23398885	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23401048_23403205_23403510_23403719_23403748_23404740_23404847_23404950_23405109_23405257_23405336_23415893
WTC11_00046712	chr19	-	3203	7	NIC	ENSG00000269416.7	novel	2766	8	NA	NA	0	210	intron_retention	FALSE	canonical	3	51	junction_4	33.1029538796095	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCGATTTAGTTGGAGA	-23411606	True	NA	-6	True	AATAAA	-18	NA	23416047	23398886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_23401048_23402176_23402513_23403205_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23415893
WTC11_00046713	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	35.8364339743786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-23411630	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
WTC11_00046714	chr19	-	2001	2	FSM	ENSG00000269416.7	ENST00000654756.1	2001	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTTTCTTTTCTTTCC	-23403408	False	NA	NA	False	AATACA	-16	NA	23403419	23400289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23402176
WTC11_00046720	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	13.0213499897497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	-23683101	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
WTC11_00046721	chr19	-	595	5	FSM	ENSG00000197372.10	ENST00000597074.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	106.082515053142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTTAACCAATGTTT	-23683029	True	NA	77	True	NA	NA	NA	23687140	23654545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23654707_23656721_23656823_23662113_23662210_23663031_23663159_23687030
WTC11_00046724	chr19	-	2058	2	NIC	ENSG00000196172.9	novel	628	3	NA	NA	-4	1522	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGCAATTACTGTCAAAA	-23756008	True	NA	-16	True	AATAAA	-9	NA	23758844	23743363	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_23745324_23758746
WTC11_00046725	chr19	-	450	1	NIC	ENSG00000267696.6	novel	457	2	NA	NA	1683	3	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTAAGAAAAATTCTTC	NA	False	NA	NA	False	NA	NA	NA	27638955	27638505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_27638500_27639000
WTC11_00046726	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	18.6882315910308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793804	True	NA	-4	True	AATAAA	-27	NA	27793900	27721701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
WTC11_00046727	chr19	-	3442	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	289	-3	135	multi-exon	TRUE	canonical	3	28	junction_1	9.46337971105226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATGATAAAAACTAGAAAC	-27793295	False	NA	NA	False	NA	NA	NA	27793391	27728072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
WTC11_00046728	chr19	-	3438	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	-9	8	0	multi-exon	FALSE	canonical	3	16	junction_4	13.3486890742125	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTATGAAAATGCCTTG	-27793738	False	NA	NA	False	AATAAA	-21	NA	27793834	27728220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
WTC11_00046729	chr19	-	1965	3	FSM	ENSG00000261824.8	ENST00000659422.1	2229	3	47	217	0	-39	multi-exon	FALSE	canonical	2	4	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGCATTCTAAGAATAAA	-27793797	True	NA	NA	False	NA	NA	NA	27793893	27790531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27791902_27792999_27793233_27793531
WTC11_00046730	chr19	-	1176	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	0	1715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2031	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGATTTTCCAAAGAG	-29180404	True	NA	NA	False	AATGAA	-38	NA	29213151	29203604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_29203643_29207267_29208159_29212904
WTC11_00046731	chr19	-	5059	2	FSM	ENSG00000169021.6	ENST00000304863.6	3086	2	0	-1973	0	1973	multi-exon	FALSE	canonical	3	4062	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTCCTTTAGTATTT	-29180404	True	NA	NA	False	AATGAA	-32	NA	29213151	29203346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29208159_29212904
WTC11_00046732	chr19	-	4234	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	31	-539	31	-100	multi-exon	FALSE	canonical	3	6	junction_2	34.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	-29714069	False	960	NA	False	NA	NA	NA	29715029	29699036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29702978_29708253_29708424_29714906
WTC11_00046733	chr19	-	4318	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	30	0	-30	multi-exon	FALSE	canonical	3	75	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATATTCTCTTTATTG	-29714301	True	NA	NA	False	NA	NA	NA	29715261	29698966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29702978_29708253_29708424_29715124
WTC11_00046734	chr19	-	4078	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	-40	-2126	0	-100	multi-exon	FALSE	canonical	3	33	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	-29714301	True	NA	NA	False	NA	NA	NA	29715261	29699036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29702978_29715124
WTC11_00046738	chr19	-	5526	3	NNC	ENSG00000121297.8	novel	5065	2	NA	NA	-935	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTTGCGTTCACAA	-31350173	True	NA	-1	True	ATTAAA	-18	NA	31350371	31274945	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_31279753_31349179_31349851_31350323
WTC11_00046739	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405149	True	NA	1	True	AATAAA	-24	NA	32405560	32390049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32390334_32399750_32399869_32404990
WTC11_00046740	chr19	-	1883	3	FSM	ENSG00000105186.16	ENST00000587667.1	439	3	-121	-1323	-121	1	multi-exon	FALSE	canonical	3	369	junction_1	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGGTATTTTTTTT	-32600395	False	NA	-6	True	AGTAAA	-17	NA	32600407	32597004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32598379_32599703_32599777_32599971
WTC11_00046741	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_26	28.660641966976	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-32669631	True	NA	-7	True	AGTAAA	-16	NA	32675180	32597005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
WTC11_00046742	chr19	-	628	8	FSM	ENSG00000105186.16	ENST00000591100.6	628	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	122.72501200419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTTCCAAGGGCGCC	-32643289	False	NA	NA	False	NA	NA	NA	32643300	32626806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32643122_32643200_32643286
WTC11_00046743	chr19	-	3262	12	FSM	ENSG00000105186.16	ENST00000587352.5	3301	12	0	39	0	-39	multi-exon	FALSE	canonical	3	289	junction_9	29.3288564076716	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATGTGATCATACAG	-32669620	True	NA	NA	False	NA	NA	NA	32675169	32637338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
WTC11_00046744	chr19	-	498	3	FSM	ENSG00000105186.16	ENST00000593232.5	558	3	0	60	0	0	multi-exon	FALSE	canonical	3	350	junction_2	18	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGTTTGCGCCACAGC	-32643774	False	NA	NA	False	NA	NA	NA	32643785	32643122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32643353_32643430_32643485_32643571
WTC11_00046747	chr19	-	5674	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	-1	0	1	multi-exon	FALSE	canonical	1	15	junction_7	17.209672847157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTCCTGAGTGTTTG	-32969321	True	NA	0	True	ATTAAA	-18	NA	32971958	32875923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
WTC11_00046748	chr19	-	2367	18	FSM	ENSG00000121289.18	ENST00000591698.5	2367	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	21.9779694664569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACATTTTGCTTTATTT	NA	False	NA	-3	True	AATAAA	-23	NA	32959952	32879002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937012_32937121_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899
WTC11_00046752	chr19	-	2870	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	33	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-32969321	True	NA	0	True	AATAAA	-19	NA	32971958	32968908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32971656_32971835
WTC11_00046754	chr19	-	416	2	FSM	ENSG00000131941.8	ENST00000591502.1	540	2	63	61	63	-61	multi-exon	FALSE	canonical	3	51	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCTGACACCTCCCT	NA	False	NA	NA	False	NA	NA	NA	32992082	32990513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32990670_32991822
WTC11_00046755	chr19	-	1946	11	FSM	ENSG00000130876.11	ENST00000253188.8	1946	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	5.38887743412299	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGCTATGGGGAGTCC	-33225638	True	NA	-8	True	AATAAA	-16	NA	33225850	33208663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33209022_33209307_33209486_33210466_33210617_33210801_33210899_33211224_33211329_33211413_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33215768_33215974_33225552
WTC11_00046757	chr19	-	1431	4	FSM	ENSG00000130876.11	ENST00000592596.1	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	8.9938250421547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTACCTCGCGCCATC	-33225586	True	NA	NA	False	NA	NA	NA	33225798	33211538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33212446_33212513_33212640_33212850_33213003_33225552
WTC11_00046758	chr19	-	2035	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	-128	0	128	multi-exon	TRUE	canonical	3	649	junction_14	49.8649707321928	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAACGGCTGCTTCTGCC	-33515167	True	NA	NA	False	NA	NA	NA	33521791	33386821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
WTC11_00046759	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	195.926573547904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-33515167	True	NA	-30	True	NA	NA	NA	33521791	33386979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
WTC11_00046763	chr19	-	609	3	FSM	ENSG00000268751.2	ENST00000690771.1	659	3	45	5	43	0	multi-exon	FALSE	canonical	3	11	junction_1	24.5	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577156	True	NA	-6	True	AATAAA	-15	NA	34577752	34576732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34576941_34577265_34577457_34577542
WTC11_00046765	chr19	-	831	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	-297	6	-297	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTACCTCTGAGAGAGAC	-34733941	False	NA	-5	True	ATTAAA	-17	NA	34734134	34733303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34733300_34734100
WTC11_00046767	chr19	-	949	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	-1	0	1	multi-exon	FALSE	canonical	3	43	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTTTTGTTTTGTTTTT	-34772908	True	NA	6	True	AATAAA	-31	NA	34773200	34766966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34767412_34769428_34769556_34772823
WTC11_00046769	chr19	-	3949	1	FSM	ENSG00000261754.2	ENST00000561778.2	2757	1	-519	-673	-519	673	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTGTGTCTCCCCAA	NA	False	NA	NA	False	AATAAA	-40	NA	34814864	34810915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34810900_34814900
WTC11_00046771	chr19	-	1140	3	FSM	ENSG00000271109.2	ENST00000657506.1	1142	3	0	2	0	0	multi-exon	TRUE	canonical	3	11	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860685	34849047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34850668_34850795_34860173
WTC11_00046772	chr19	-	876	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	-2	0	0	multi-exon	FALSE	canonical	3	8	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860691	34849045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34860173_34860303_34860448
WTC11_00046777	chr19	-	4068	4	FSM	ENSG00000180884.10	ENST00000404801.2	4068	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.08248290463863	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTTTCTTTCA	-34963830	True	NA	-1	True	CATAAA	-15	NA	34964229	34956353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34959572_34960234_34960358_34960867_34960995_34963629
WTC11_00046778	chr19	-	713	1	FSM	ENSG00000262497.1	ENST00000577135.1	713	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGGACCAGGGCCGTA	NA	False	NA	NA	False	NA	NA	NA	35233003	35232290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35232300_35233000
WTC11_00046780	chr19	-	926	14	FSM	ENSG00000161249.21	ENST00000434389.5	923	14	0	-3	0	3	multi-exon	FALSE	canonical	3	28	junction_11	489.914048735009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35510079	False	NA	1	True	AATAAA	-24	NA	35510211	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183
WTC11_00046781	chr19	-	1077	10	FSM	ENSG00000161249.21	ENST00000488542.6	1074	10	0	-3	0	3	multi-exon	FALSE	canonical	3	88	junction_1	403.496141000715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481305	True	NA	1	True	AATAAA	-24	NA	35510427	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
WTC11_00046782	chr19	-	1046	11	NIC	ENSG00000161249.21	novel	842	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_2	489.46155109467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481308	True	NA	-2	True	AATAAA	-21	NA	35510430	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183
WTC11_00046783	chr19	-	981	14	NIC	ENSG00000161249.21	novel	970	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	490.745405739512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481308	True	NA	-2	True	AATAAA	-21	NA	35510430	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
WTC11_00046784	chr19	-	963	13	NIC	ENSG00000161249.21	novel	970	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	479.013192812984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481308	True	NA	-2	True	AATAAA	-21	NA	35510430	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
WTC11_00046786	chr19	-	1109	10	NIC	ENSG00000161249.21	novel	935	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	479.040424593856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481313	True	NA	-2	True	AATAAA	-21	NA	35510435	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498597_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183
WTC11_00046787	chr19	-	883	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	-6	0	3	multi-exon	FALSE	canonical	3	76	junction_5	424.670801040286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481313	True	NA	1	True	AATAAA	-24	NA	35510435	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
WTC11_00046788	chr19	-	973	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	-3	0	3	multi-exon	FALSE	canonical	3	76	junction_6	440.418856579472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481317	True	NA	1	True	AATAAA	-24	NA	35510439	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
WTC11_00046789	chr19	-	853	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	-5	0	3	multi-exon	FALSE	canonical	3	530	junction_1	316.055833675001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481317	True	NA	1	True	AATAAA	-24	NA	35510439	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
WTC11_00046790	chr19	-	890	8	NIC	ENSG00000161249.21	novel	935	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	545.033906453235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481320	True	NA	-2	True	AATAAA	-21	NA	35510442	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35510183
WTC11_00046791	chr19	-	823	10	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	425.680225428652	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481322	True	NA	-2	True	AATAAA	-21	NA	35510444	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
WTC11_00046792	chr19	-	849	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	313.61033146247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481324	True	NA	-2	True	AATAAA	-21	NA	35510446	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
WTC11_00046793	chr19	-	1058	11	NIC	ENSG00000161249.21	novel	923	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15	junction_9	510.747109634504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481326	True	NA	-2	True	AATAAA	-21	NA	35510448	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35507457_35507512_35509910_35509962_35510183
WTC11_00046795	chr19	-	949	10	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	474.594511785886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481330	True	NA	-2	True	AATAAA	-21	NA	35510452	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498597_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
WTC11_00046796	chr19	-	912	12	NIC	ENSG00000161249.21	novel	935	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_5	423.436257850943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481337	True	NA	-2	True	AATAAA	-21	NA	35510459	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
WTC11_00046797	chr19	-	913	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	303.356512298185	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481337	True	NA	-2	True	AATAAA	-21	NA	35510459	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
WTC11_00046798	chr19	-	1168	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_3	485.303832665682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481337	True	NA	-2	True	AATAAA	-21	NA	35510459	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498597_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183
WTC11_00046799	chr19	-	932	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	445.977244351479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481337	True	NA	-2	True	AATAAA	-21	NA	35510459	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
WTC11_00046800	chr19	-	1015	10	NIC	ENSG00000161249.21	novel	935	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	430.175014627624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481337	True	NA	-2	True	AATAAA	-21	NA	35510459	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183
WTC11_00046801	chr19	-	1924	16	FSM	ENSG00000161249.21	ENST00000339686.8	1924	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	485.5748300268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35513517	True	NA	-2	True	AATAAA	-21	NA	35513649	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
WTC11_00046802	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	305.690601428393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-35481348	True	NA	-67	True	NA	NA	NA	35510470	35497284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
WTC11_00046804	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_9	408.147406650533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-35481324	True	NA	NA	False	NA	NA	NA	35510446	35497336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
WTC11_00046814	chr19	-	2801	3	FSM	ENSG00000161249.21	ENST00000489395.6	2811	3	14	-4	14	4	multi-exon	FALSE	canonical	3	1022	junction_1	374.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35508411	False	NA	1	True	AATAAA	-21	NA	35508543	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938
WTC11_00046816	chr19	-	310	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	-4	0	4	multi-exon	FALSE	canonical	3	60	junction_2	418.550939419432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481301	True	NA	1	True	AATAAA	-21	NA	35510423	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
WTC11_00046817	chr19	-	581	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	-4	0	4	multi-exon	FALSE	canonical	3	719	junction_3	392.557241048997	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481347	True	NA	1	True	AATAAA	-21	NA	35510469	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
WTC11_00046818	chr19	-	464	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	-6	0	4	multi-exon	FALSE	canonical	3	719	junction_3	381.930674337634	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481348	True	NA	1	True	AATAAA	-21	NA	35510470	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
WTC11_00046819	chr19	-	418	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	-4	0	4	multi-exon	FALSE	canonical	3	745	junction_4	408.656946594573	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481353	True	NA	1	True	AATAAA	-21	NA	35510475	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
WTC11_00046820	chr19	-	445	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	-4	0	4	multi-exon	FALSE	canonical	3	806	junction_3	389.13774874715	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481388	True	NA	1	True	AATAAA	-21	NA	35510510	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
WTC11_00046821	chr19	-	571	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	-4	0	4	multi-exon	FALSE	canonical	3	806	junction_3	413.505609259281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTCCTTTCTTA	-35481388	True	NA	1	True	AATAAA	-21	NA	35510510	35503299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
WTC11_00046823	chr19	-	454	4	ISM	ENSG00000161249.21	ENST00000470746.6	370	5	42	0	4	0	intron_retention	FALSE	canonical	3	20	junction_2	460.797135407763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481272	True	NA	-3	True	AATAAA	-17	NA	35510394	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183
WTC11_00046824	chr19	-	424	5	NIC	ENSG00000161249.21	novel	441	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	620.996930346681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481308	True	NA	-3	True	AATAAA	-17	NA	35510430	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183_35510253_35510378
WTC11_00046825	chr19	-	538	8	NIC	ENSG00000161249.21	novel	1611	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	603.170399317013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481320	True	NA	-3	True	AATAAA	-17	NA	35510442	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35507457_35507512_35509910_35509962_35510183_35510253_35510378
WTC11_00046826	chr19	-	590	6	ISM	ENSG00000161249.21	ENST00000424570.6	1293	11	3035	-27	0	0	3prime_fragment	FALSE	canonical	3	93	junction_3	628.345892005351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481324	True	NA	-3	True	AATAAA	-17	NA	35510446	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183
WTC11_00046827	chr19	-	510	6	NIC	ENSG00000161249.21	novel	458	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	564.733353008303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481335	True	NA	-3	True	AATAAA	-17	NA	35510457	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35506050_35509910_35509962_35510183_35510253_35510370
WTC11_00046828	chr19	-	472	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	641.242107163901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481383	True	NA	-3	True	AATAAA	-17	NA	35510505	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35510183_35510253_35510378
WTC11_00046829	chr19	-	492	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	719	junction_3	367.673442065102	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
WTC11_00046833	chr19	-	3768	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	-1	0	0	multi-exon	FALSE	canonical	3	105	junction_2	17	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGTGCTACCGCTGT	-35542678	True	NA	-21	True	ATTAAA	-24	NA	35545507	35540737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35542075_35542910
WTC11_00046834	chr19	-	4825	1	FSM	ENSG00000236144.9	ENST00000588286.1	3911	1	-71	-843	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-35542734	True	NA	-22	True	ATTAAA	-23	NA	35545563	35540738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35540700_35545600
WTC11_00046835	chr19	-	3683	3	NNC	ENSG00000236144.9	novel	3767	3	NA	NA	31	-1	intron_retention	FALSE	canonical	3	6	junction_2	66.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGAAGTGCTACCGCT	-35542632	True	NA	-23	True	ATTAAA	-22	NA	35545461	35540739	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35541585_35541750_35542038_35542910
WTC11_00046836	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	25	junction_3	47.7865624998865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542674	True	NA	-26	True	NA	NA	NA	35545503	35540859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
WTC11_00046837	chr19	-	4435	2	FSM	ENSG00000236144.9	ENST00000670097.1	4435	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGATCCCCACTTCAG	-35542686	True	NA	-81	True	NA	NA	NA	35545515	35540914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750
WTC11_00046838	chr19	-	3501	3	FSM	ENSG00000236144.9	ENST00000667891.1	3499	3	0	-2	0	0	multi-exon	FALSE	canonical	3	20	junction_2	59.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGATCCCCACTTCAG	-35542734	True	NA	-81	True	NA	NA	NA	35545563	35540914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35541929_35542910
WTC11_00046839	chr19	-	2204	4	FSM	ENSG00000236144.9	ENST00000660839.1	2204	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	58.8614191696621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGGTGACGGGGTT	-35544931	False	NA	NA	False	NA	NA	NA	35545160	35540970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35541929_35542910_35543274_35544111
WTC11_00046840	chr19	-	3797	2	FSM	ENSG00000236144.9	ENST00000654809.1	3064	2	34	-767	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542663	True	NA	-26	True	NA	NA	NA	35545492	35540859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35542075_35542910
WTC11_00046841	chr19	-	1202	3	ISM	ENSG00000126246.10	ENST00000246532.6	1647	5	1903	173	0	-173	3prime_fragment	FALSE	canonical	3	73	junction_2	18.5	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCTGATGAACTTCCT	-35739652	False	897	NA	False	NA	NA	NA	35740549	35738973	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35739627_35739709_35740089_35740379
WTC11_00046842	chr19	-	767	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	15	0	15	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	-35740423	False	NA	71	True	NA	NA	NA	35741320	35739156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35739627_35741023
WTC11_00046843	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-35739699	False	897	NA	False	NA	NA	NA	35740596	35739823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35740089_35740379
WTC11_00046848	chr19	-	1246	6	FSM	ENSG00000161265.15	ENST00000585554.5	1244	6	0	-2	0	0	multi-exon	FALSE	canonical	3	16	junction_4	63.8510767332862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744500	True	NA	-5	True	AATAAA	-26	NA	35745397	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744982_35745124_35745213_35745347
WTC11_00046850	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	55.5099990992614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744521	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
WTC11_00046854	chr19	-	734	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	-5	0	0	multi-exon	FALSE	canonical	3	51	junction_4	53.5738742298893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	NA	False	NA	-5	True	AATAAA	-26	NA	35745445	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
WTC11_00046855	chr19	-	2588	3	FSM	ENSG00000161265.15	ENST00000588892.1	2582	3	0	-6	0	0	multi-exon	FALSE	canonical	3	68	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744517	True	NA	-5	True	AATAAA	-26	NA	35745414	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35743905_35744069_35745213_35745347
WTC11_00046856	chr19	-	980	6	FSM	ENSG00000161265.15	ENST00000592913.5	975	6	0	-5	0	0	multi-exon	FALSE	canonical	3	54	junction_4	51.3809303146605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	NA	False	NA	-5	True	AATAAA	-26	NA	35745426	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744069_35744422_35744625_35744739_35745124_35745188_35745347
WTC11_00046863	chr19	-	1459	3	FSM	ENSG00000004776.13	ENST00000004982.6	1460	3	0	1	0	-1	multi-exon	TRUE	canonical	3	13	junction_1	4	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTGTGCCTGGGCCA	-35757008	False	NA	-5	True	AATAAA	-19	NA	35757029	35754566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35755684_35755771_35755895_35756810
WTC11_00046864	chr19	-	2370	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	129	-665	0	77	multi-exon	FALSE	canonical	3	36	junction_11	6.14023446937028	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGGGGTCATATTGGGA	-35899533	True	NA	NA	False	NA	NA	NA	35900521	35887575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
WTC11_00046866	chr19	-	1524	12	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	2	-172	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	13.4502450129762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAACAGGCCCCAATA	-35899542	True	NA	NA	False	ATTAAA	-20	NA	35900530	35888412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897839_35898471_35898533_35898718_35898823_35900441
WTC11_00046868	chr19	-	721	3	FSM	ENSG00000181392.17	ENST00000505054.2	713	3	0	-8	0	8	multi-exon	FALSE	canonical	3	15	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTAGGTGCCTTCATAC	-36004462	False	NA	-24	True	AATAAA	-26	NA	36008610	36003298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36005332_36005438_36008216
WTC11_00046869	chr19	-	2350	7	FSM	ENSG00000181392.17	ENST00000465425.2	2341	7	0	-9	0	8	multi-exon	FALSE	canonical	3	104	junction_3	67.8282143850674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTAGGTGCCTTCATAC	-36004645	False	4148	-24	True	AATAAA	-26	NA	36008793	36003298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
WTC11_00046870	chr19	-	1385	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	-8	0	8	multi-exon	FALSE	canonical	3	104	junction_4	64.5742730094105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTAGGTGCCTTCATAC	-36004665	False	4148	-24	True	AATAAA	-26	NA	36008813	36003298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
WTC11_00046871	chr19	-	535	3	FSM	ENSG00000248101.2_ENSG00000181392.17	ENST00000397428.8	382	3	-163	10	0	-10	multi-exon	FALSE	canonical	3	15	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTCAAAGGATGTGTGA	-36004634	False	4148	-45	True	AATAAA	-5	NA	36008782	36003319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36005332_36005438_36008553
WTC11_00046872	chr19	-	708	5	NIC	ENSG00000181392.17	novel	1004	6	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	98.5884754928283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004587	False	4148	-35	True	AATAAA	-15	NA	36008735	36003309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008216_36008368_36008553
WTC11_00046873	chr19	-	586	4	NIC	ENSG00000181392.17	novel	1004	6	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	111.493896195661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004616	False	4148	-35	True	AATAAA	-15	NA	36008764	36003309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008553
WTC11_00046874	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	94.0799659863884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004634	False	4148	-35	True	AATAAA	-15	NA	36008782	36003309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
WTC11_00046875	chr19	-	1175	8	FSM	ENSG00000181392.17	ENST00000490730.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	78.162833696256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004645	False	4148	-35	True	AATAAA	-15	NA	36008793	36003309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
WTC11_00046876	chr19	-	983	7	FSM	ENSG00000239382.11	ENST00000378875.8	951	7	-26	-6	0	6	multi-exon	FALSE	canonical	3	174	junction_2	48.6860691916418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTTATTTTTTAG	-36010091	True	NA	-3	True	AATAAA	-21	NA	36014239	36009113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36014174
WTC11_00046877	chr19	-	984	7	FSM	ENSG00000239382.11	ENST00000490986.5	977	7	0	-7	0	6	multi-exon	FALSE	canonical	3	58	junction_3	86.6071911307344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTTATTTTTTAG	-36010060	True	NA	-3	True	AATAAA	-21	NA	36014208	36009113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
WTC11_00046878	chr19	-	3334	3	FSM	ENSG00000239382.11	ENST00000471323.1	3326	3	0	-8	0	6	multi-exon	FALSE	canonical	3	198	junction_2	51.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTTATTTTTTAG	-36010064	True	NA	-3	True	AATAAA	-21	NA	36014212	36009113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36009554_36010566_36013423_36014174
WTC11_00046888	chr19	-	3351	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	-1	0	1	multi-exon	TRUE	canonical	3	41	junction_12	5.24206924227718	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCGGGTCATTGGG	-36032162	True	NA	-3	True	AATAAA	-17	NA	36032873	36014658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
WTC11_00046889	chr19	-	3420	13	FSM	ENSG00000105270.15	ENST00000593074.5	2080	13	36	-1376	36	0	multi-exon	FALSE	canonical	3	41	junction_12	5.09015935135848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-36032620	False	711	-4	True	AATAAA	-16	NA	36032635	36014659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191
WTC11_00046890	chr19	-	368	2	FSM	ENSG00000105270.15	ENST00000585466.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCCCTTGGAGCTGCG	-36025514	False	NA	NA	False	GGGGCT	-43	NA	36026225	36024343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36024633_36026146
WTC11_00046891	chr19	-	503	8	NNC	ENSG00000105258.9	novel	443	6	NA	NA	0	84712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1025.94690955453	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGAGATGGAGAAGGG	-36101580	True	NA	NA	False	NA	NA	NA	36114891	36028996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36029026_36085414_36085438_36113716_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
WTC11_00046892	chr19	-	1429	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	54.1253688722355	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGTGCTATAAAGACAA	-36053331	True	NA	1	True	AATAAA	-23	NA	36054377	36034981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054148
WTC11_00046893	chr19	-	1627	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	-116	-162	0	162	multi-exon	FALSE	canonical	3	91	junction_3	19.4821855949366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGATGTGTCAGGTCTG	-36053355	True	NA	NA	False	NA	NA	NA	36054401	36034821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
WTC11_00046894	chr19	-	1108	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	-24	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	-36053355	True	NA	NA	False	NA	NA	NA	36054401	36035147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36035593_36039322_36039719_36054134
WTC11_00046896	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	89.8563297714746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-36101564	True	NA	-2	True	AATAAA	-20	NA	36114875	36113708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
WTC11_00046897	chr19	-	543	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	-1	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	98.8366708261665	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-36101580	True	NA	-2	True	AATAAA	-20	NA	36114891	36113708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
WTC11_00046898	chr19	-	496	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	-3	0	1	multi-exon	FALSE	canonical	3	22	junction_2	895.113043140362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTTCTGTGTTTATT	-36101595	True	NA	-6	True	AATAAA	-16	NA	36114906	36113712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
WTC11_00046899	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	97.2329676601511	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	-36112684	True	NA	-16	True	AATAAA	-6	NA	36115193	36113722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
WTC11_00046900	chr19	-	423	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	-83	0	-81	0	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	-36152228	False	NA	NA	False	AATAAA	-13	NA	36152530	36150921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
WTC11_00046901	chr19	-	3645	2	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAAGAAAATGAA	NA	False	NA	14	True	NA	NA	NA	36160755	36155473	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_36158795_36160431
WTC11_00046902	chr19	-	1790	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	9	0	-9	multi-exon	FALSE	canonical	2	8	junction_4	5.3851648071345	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTTTCCTAAGCATC	-36214337	True	NA	-1	True	AATAAA	-23	NA	36214665	36182284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
WTC11_00046903	chr19	-	1932	5	FSM	ENSG00000196357.12	ENST00000392173.6	1931	5	0	-1	0	1	multi-exon	FALSE	canonical	2	4	junction_4	6.78232998312527	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCACTCACTGTTTCC	-36215057	True	NA	-9	True	AATAAA	-15	NA	36215081	36182292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214887
WTC11_00046905	chr19	-	2067	4	NNC	ENSG00000232677.10	novel	2310	4	NA	NA	0	9414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.151804170088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAAATCAGTAAGCACT	-36315068	True	NA	NA	False	ATTAAA	-33	NA	36331662	36250125	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36250884_36324911_36325765_36330252_36330493_36331446
WTC11_00046907	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	105	junction_3	348.121386875325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-36315093	True	NA	-4	True	ATTAAA	-26	NA	36331687	36313066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
WTC11_00046908	chr19	-	1013	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	6	0	0	multi-exon	FALSE	canonical	3	105	junction_4	326.427327287407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-36315159	True	NA	-4	True	ATTAAA	-26	NA	36331753	36313066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
WTC11_00046909	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	311.553856589123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315068	True	NA	-31	True	NA	NA	NA	36331662	36313093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
WTC11_00046910	chr19	-	1657	6	FSM	ENSG00000232677.10	ENST00000658042.1	1657	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	350.954469981506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATAGACGAATTAGG	-36315105	True	NA	NA	False	TTTAAA	-17	NA	36331699	36315173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36316071_36316177_36316349_36321299_36321358_36321992_36322031_36330252_36330493_36331446
WTC11_00046914	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	326.633372452969	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	-36315124	True	NA	-10	True	AATAAA	-10	NA	36331718	36319715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
WTC11_00046915	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	310.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-36315151	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36330252_36330493_36331446
WTC11_00046917	chr19	-	2119	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	-8	0	6	multi-exon	FALSE	canonical	3	52	junction_1	393.500811802071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315140	True	NA	-14	True	AATAAA	-12	NA	36331734	36324917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
WTC11_00046918	chr19	-	2548	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	-8	0	6	multi-exon	FALSE	canonical	3	7	junction_1	407.520415303195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315140	True	NA	-14	True	AATAAA	-12	NA	36331734	36324917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
WTC11_00046920	chr19	-	2789	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	14	-6	-1	6	multi-exon	FALSE	canonical	3	64	junction_1	447.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315148	True	NA	-14	True	AATAAA	-12	NA	36331742	36324917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36327171_36330252_36330493_36331446
WTC11_00046921	chr19	-	2855	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	3	10	0	6	multi-exon	FALSE	canonical	3	223	junction_1	368	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315159	True	NA	-14	True	AATAAA	-12	NA	36331753	36324917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36327226_36330252_36330493_36331446
WTC11_00046923	chr19	-	7486	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	5	0	5	0	multi-exon	FALSE	canonical	3	28	junction_4	6.86931583201704	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-36377435	True	NA	1	True	AATAAA	-20	NA	36379196	36334452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
WTC11_00046924	chr19	-	656	3	FSM	ENSG00000142065.14	ENST00000589280.1	642	3	2	-16	2	16	multi-exon	FALSE	canonical	3	24	junction_1	11.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTCTTGAAAAGATCAG	NA	False	NA	NA	False	AATAAA	-23	NA	36367971	36360095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36360537_36362111_36362239_36367883
WTC11_00046925	chr19	-	5959	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	-18	0	18	multi-exon	FALSE	canonical	3	63	junction_1	13.9104277432436	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTTTAAAAATTTAA	-36416635	True	NA	NA	False	AAAAAG	-19	NA	36418644	36388611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
WTC11_00046926	chr19	-	5197	5	FSM	ENSG00000186017.16	ENST00000434377.6	5197	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	13.4629120178363	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488269	True	NA	2	True	AATAAA	-19	NA	36489435	36445118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489412
WTC11_00046927	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.347903928532	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488340	True	NA	2	True	AATAAA	-19	NA	36489506	36445118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
WTC11_00046928	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	3	17	junction_4	9.54921462739214	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488352	True	NA	2	True	AATAAA	-19	NA	36489518	36445118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
WTC11_00046929	chr19	-	5229	5	FSM	ENSG00000186017.16	ENST00000427002.2	5229	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12.7867118525444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488371	True	NA	2	True	AATAAA	-19	NA	36489537	36445118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473010_36473331_36473459_36476548_36476617_36489485
WTC11_00046930	chr19	-	5265	5	FSM	ENSG00000186017.16	ENST00000392170.7	5265	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12.1860576069539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36489288	False	NA	2	True	AATAAA	-19	NA	36489561	36445118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473010_36473331_36473459_36476548_36476617_36489473
WTC11_00046932	chr19	-	5136	2	FSM	ENSG00000254004.7	ENST00000593142.5	4047	2	0	-1089	0	-3	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCAGTTGTTTTTA	-36525276	False	NA	-4	True	AATAAA	-19	NA	36525299	36510689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36515700_36525173
WTC11_00046933	chr19	-	5265	3	NNC	ENSG00000254004.7	novel	5285	3	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	93.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGATTTCAGTTGTTTT	-36525346	True	NA	-6	True	AATAAA	-17	NA	36528252	36510691	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36515700_36525150_36525374_36528218
WTC11_00046934	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-36525365	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36515700_36525154_36525374_36528218
WTC11_00046936	chr19	-	5242	6	FSM	ENSG00000186020.13	ENST00000334116.7	5238	6	0	-4	0	1	multi-exon	FALSE	canonical	2	6	junction_1	16.4681510801911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGCATTTTCTTACAA	-36571504	True	NA	2	True	AATAAA	-23	NA	36573288	36543611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36548323_36551876_36551978_36554669_36554797_36556103_36556198_36572332_36572393_36573139
WTC11_00046937	chr19	-	5141	5	FSM	ENSG00000186020.13	ENST00000591340.6	5144	5	4	-1	0	1	multi-exon	FALSE	canonical	3	25	junction_1	7.58287544405155	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGCATTTTCTTACAA	-36571504	True	NA	2	True	AATAAA	-23	NA	36573288	36543611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36548323_36554669_36554797_36556103_36556198_36572332_36572393_36573139
WTC11_00046942	chr19	-	7714	5	FSM	ENSG00000267041.6	ENST00000591344.2	7712	5	0	-2	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.49583217528247	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTATTTCTTAATTT	-36763474	True	NA	-1	True	AATAAA	-23	NA	36772807	36743477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
WTC11_00046943	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.56224173112709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-36838086	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
WTC11_00046946	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	103.453794033858	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	-37171180	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
WTC11_00046947	chr19	-	6812	6	FSM	ENSG00000196967.11	ENST00000356958.8	6822	6	10	0	-5	0	multi-exon	FALSE	canonical	3	13	junction_3	135.539514533585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTAGTCAACATTT	-37171216	True	NA	NA	False	AATAAA	-20	NA	37172731	37147437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37165594_37165697_37169838_37170055_37172626
WTC11_00046949	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	33.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	-37171179	True	NA	71	True	AATAAA	-17	NA	37172694	37165384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37165697_37169838_37170055_37172626
WTC11_00046950	chr19	-	6206	5	FSM	ENSG00000245680.11	ENST00000532828.7	6197	5	0	-9	0	9	multi-exon	FALSE	canonical	3	12	junction_4	13.2382022948737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTTGTGTGAACATGA	-37210131	True	NA	-5	True	AATAAA	-23	NA	37210536	37181569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210440
WTC11_00046952	chr19	-	2734	6	FSM	ENSG00000245680.11	ENST00000527838.5	2732	6	0	-2	0	0	multi-exon	FALSE	canonical	3	12	junction_5	12.8530152104477	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGAGTTGTTTGT	-37210079	True	NA	-2	True	AATATA	-16	NA	37210484	37184819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37186929_37187098_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210440
WTC11_00046953	chr19	-	2737	6	NIC	ENSG00000245680.11	novel	2732	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	11.3243101335137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGAGTTGTTTGT	-37210100	True	NA	-2	True	AATATA	-16	NA	37210505	37184819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37186929_37187098_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210458
WTC11_00046956	chr19	-	2732	1	FSM	ENSG00000267605.8	ENST00000612804.1	2303	1	-420	-9	316	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGGTGCCCCTTTAA	NA	False	NA	NA	False	ATTAAA	-23	NA	37268668	37265936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37265900_37268700
WTC11_00046957	chr19	-	805	1	FSM	ENSG00000276846.1	ENST00000611171.1	753	1	-64	12	-64	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAAAAAAATAGTGCCT	-37315441	False	NA	NA	False	AATAAA	-3	NA	37315684	37314879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37314900_37315700
WTC11_00046958	chr19	-	3875	6	NIC	ENSG00000196437.12	novel	4066	6	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	27.3642102023793	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGACAGTGGTGACAAAT	-37466885	True	NA	-19	True	AATAAA	-14	NA	37467429	37411157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467258
WTC11_00046959	chr19	-	4068	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	-2	0	0	multi-exon	FALSE	canonical	3	73	junction_5	5.85149553533112	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGGTGACAAATCTG	-37466900	True	NA	-16	True	AATAAA	-17	NA	37467444	37411154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
WTC11_00046960	chr19	-	873	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	33	7	-2	-7	multi-exon	FALSE	canonical	3	14	junction_2	1.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTCTTCAAGGTT	-37506810	True	NA	NA	False	AATAAA	-33	NA	37507089	37497165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37497593_37505845_37506041_37506838
WTC11_00046963	chr19	-	4292	5	NIC	ENSG00000198182.13	novel	4327	5	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	10.2347447452294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTTGTGTTATTTTTA	-37718609	True	NA	NA	False	AATAAA	-26	NA	37719723	37696364	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37699896_37707913_37708010_37709695_37709823_37711609_37711693_37719268
WTC11_00046964	chr19	-	4574	5	FSM	ENSG00000198182.13	ENST00000395835.7	4003	5	-568	-3	5	1	multi-exon	FALSE	canonical	3	30	junction_4	21.2294017814916	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCATTACTTGTGTTAT	-37718642	True	NA	NA	False	AATAAA	-21	NA	37719756	37696369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37699896_37707913_37708010_37709695_37709823_37711609_37711693_37719014
WTC11_00046965	chr19	-	4333	5	FSM	ENSG00000198182.13	ENST00000355202.9	4327	5	0	-6	0	6	multi-exon	FALSE	canonical	3	22	junction_2	25.1731503789256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTTGTGTTATTTTTA	-37718647	True	NA	NA	False	AATAAA	-26	NA	37719761	37696364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37699896_37707913_37708013_37709695_37709823_37711609_37711693_37719268
WTC11_00046969	chr19	-	2270	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	31	0	31	0	multi-exon	FALSE	canonical	3	16	junction_11	9.15342143501227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223658	False	533	-10	True	ATTAAA	-26	NA	38224191	38211005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
WTC11_00046970	chr19	-	2280	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	79	-3	51	0	multi-exon	TRUE	canonical	3	11	junction_2	11.6484312425847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223638	False	533	-10	True	ATTAAA	-26	NA	38224171	38211005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
WTC11_00046971	chr19	-	2288	12	FSM	ENSG00000011332.22	ENST00000456296.5	1562	12	23	-749	0	0	multi-exon	FALSE	canonical	2	26	junction_11	7.44011907840368	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38229121	True	NA	-10	True	ATTAAA	-26	NA	38229654	38211005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
WTC11_00046974	chr19	-	822	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	-249	-13	-91	13	multi-exon	FALSE	canonical	3	302	junction_1	16.391054470859	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCCCCCCGGGTTA	-38256597	False	NA	12	True	NA	NA	NA	38256623	38251223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
WTC11_00046975	chr19	-	1233	9	NNC	ENSG00000167645.17	novel	964	8	NA	NA	0	483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	434.513934615451	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTAATCAGTGTGGGC	-38315774	False	NA	NA	False	NA	NA	NA	38315793	38303074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38303106_38305113_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
WTC11_00046976	chr19	-	2769	8	FSM	ENSG00000167645.17	ENST00000339413.11	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_7	339.645373281952	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTGTAAT	-38313031	True	NA	1	True	AATAAA	-24	NA	38315947	38303557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315859
WTC11_00046977	chr19	-	1187	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	-6	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	215.510594464705	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	-38315901	False	NA	-2	True	AATAAA	-27	NA	38315920	38305103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
WTC11_00046978	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	467.674499518629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	-38315904	False	2916	-12	True	AATAAA	-17	NA	38315923	38305113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
WTC11_00046980	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	317.512204489843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315774	False	NA	NA	False	NA	NA	NA	38315793	38305351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
WTC11_00046981	chr19	-	1297	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	-121	-236	0	0	multi-exon	FALSE	canonical	3	91	junction_7	352.109850669895	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGACAGCCTCTCCTTG	-38315901	False	NA	-14	True	AATAAA	-15	NA	38315920	38305115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
WTC11_00046982	chr19	-	1100	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	-23	0	23	multi-exon	FALSE	canonical	3	30	junction_1	400.474310623525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTCCCCTTTTGTAA	-38315901	False	NA	NA	False	AATAAA	-14	NA	38315920	38306673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
WTC11_00046983	chr19	-	1118	6	FSM	ENSG00000167645.17	ENST00000585563.5	1118	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	442.804968355144	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGGGCTCGGGGCTG	-38315717	False	NA	NA	False	NA	NA	NA	38315736	38307427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315424
WTC11_00046987	chr19	-	646	4	FSM	ENSG00000171777.16	ENST00000587287.1	793	4	147	0	147	0	multi-exon	FALSE	canonical	1	1	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCCCCACAGAGAGAG	NA	False	NA	-64	True	NA	NA	NA	38411249	38409114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38409371_38409954_38410097_38410885_38410999_38411114
WTC11_00046988	chr19	-	560	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-473	36616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.1377056046979	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAATCCACACTGATAT	-38596144	False	NA	NA	False	AAAAAG	-1	NA	38596203	38551024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38551065_38587640_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
WTC11_00046990	chr19	-	599	5	FSM	ENSG00000104814.13	ENST00000588938.1	610	5	0	11	0	-11	multi-exon	FALSE	canonical	3	18	junction_3	35.0463978177501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTGGGGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	38597093	38593281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38593338_38595484_38595730_38595938_38596002_38596311_38596487_38597033
WTC11_00046992	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	6.55438784326958	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735122	False	76	-3	True	AATAAA	-38	NA	38735410	38730186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
WTC11_00046993	chr19	-	896	5	FSM	ENSG00000182472.9	ENST00000597987.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.5841423566947	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACGGCAGAGATATGT	-38735117	False	NA	-90	True	NA	NA	NA	38735405	38730273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735369
WTC11_00046994	chr19	-	526	3	FSM	ENSG00000182472.9	ENST00000594497.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGATTTGAATCCCAG	-38735374	False	288	NA	False	NA	NA	NA	38735662	38734565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38734871_38735369_38735430_38735501
WTC11_00046995	chr19	-	1193	11	Fusion	ENSG00000171747.9_ENSG00000104823.9	novel	1200	10	NA	NA	0	21	multi-exon	FALSE	non_canonical	0	0	junction_1	562.310136846207	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAAAATTTATTCT	-38831726	False	NA	NA	False	AAAAAG	-10	NA	38831754	38802998	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_38803032_38815421_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
WTC11_00046997	chr19	-	1235	11	Fusion	ENSG00000171747.9_ENSG00000104823.9	novel	1200	10	NA	NA	0	21	multi-exon	FALSE	non_canonical	0	0	junction_1	562.310136846207	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAAAATTTATTCT	-38821993	True	NA	NA	False	AAAAAG	-10	NA	38831794	38802998	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_38803034_38815421_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
WTC11_00047007	chr19	-	1855	12	NNC	ENSG00000104824.18	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	1402	junction_5	111.330273295569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-38847420	False	428	1	True	AATAAA	-43	NA	38847434	38836369	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844103_38845647_38845736_38845852_38846091_38847315
WTC11_00047008	chr19	-	1966	11	FSM	ENSG00000104824.18	ENST00000647557.1	1948	11	0	-18	0	0	multi-exon	FALSE	canonical	0	0	junction_8	479.005052165423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-38847420	False	428	1	True	AATAAA	-43	NA	38847434	38836369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315
WTC11_00047010	chr19	-	2407	7	FSM	ENSG00000104824.18	ENST00000595164.5	2404	7	0	-3	0	0	multi-exon	FALSE	canonical	3	1402	junction_5	131.991687448701	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	-38841734	False	NA	-24	True	AATAAA	-18	NA	38841749	38836394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487
WTC11_00047011	chr19	-	3097	6	FSM	ENSG00000104824.18	ENST00000597731.1	3094	6	0	-3	0	0	multi-exon	FALSE	canonical	3	1402	junction_5	141.275050875942	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	-38840696	False	NA	-24	True	AATAAA	-18	NA	38842328	38836394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095
WTC11_00047013	chr19	-	1894	13	NNC	ENSG00000104824.18	novel	2142	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_12	426.066276795315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGGATTCCAGGATG	-38804753	True	NA	-17	True	AATAAA	-25	NA	38849927	38836387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844103_38845647_38845736_38845852_38846091_38847315_38847435_38849870
WTC11_00047016	chr19	-	900	7	FSM	ENSG00000104824.18	ENST00000598985.5	900	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	729.025605403084	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGATGGGTCCACCAGT	-38850693	True	NA	NA	False	NA	NA	NA	38852325	38840302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
WTC11_00047018	chr19	-	659	6	FSM	ENSG00000104824.18	ENST00000600233.5	659	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	775.546001214628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGTGGACAAGGTAAT	-38849354	False	428	NA	False	NA	NA	NA	38849368	38843856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849307
WTC11_00047021	chr19	-	1819	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	-9	0	5	multi-exon	FALSE	canonical	3	34	junction_1	3.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTGTGTGTGTATG	-38869242	True	NA	0	True	ATTAAA	-27	NA	38870043	38867824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38869411_38869572_38869705_38869942
WTC11_00047022	chr19	-	1865	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	-3	0	0	multi-exon	FALSE	canonical	2	5	junction_14	18.9215926038657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	-38898924	True	NA	-2	True	ATTAAA	-22	NA	38899618	38878556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
WTC11_00047023	chr19	-	2004	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	58	0	19	0	multi-exon	FALSE	canonical	3	45	junction_12	6.9045976991969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-2	True	ATTAAA	-22	NA	38899804	38878556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
WTC11_00047026	chr19	-	690	2	FSM	ENSG00000104835.15	ENST00000594259.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38916009	False	NA	-9	True	AATAAA	-14	NA	38916046	38915265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38915750_38915840
WTC11_00047027	chr19	-	1944	16	FSM	ENSG00000104835.15	ENST00000221431.11	1924	16	0	-20	0	20	multi-exon	TRUE	canonical	0	0	junction_5	97.2018289722758	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGAGATGCCTGGCTCT	-38924880	True	NA	11	True	AATAAA	-34	NA	38930763	38915245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
WTC11_00047034	chr19	-	2218	6	FSM	ENSG00000269190.6	ENST00000292852.9	2218	6	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	6.64529909033446	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTATGTGTCTT	-38975083	True	NA	-2	True	NA	NA	NA	38975742	38941400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38942752_38944968_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
WTC11_00047035	chr19	-	1549	2	FSM	ENSG00000269190.6	ENST00000599418.1	2222	2	673	0	673	0	multi-exon	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	-38946028	False	NA	NA	False	NA	NA	NA	38946043	38942277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38942752_38944968
WTC11_00047036	chr19	-	510	3	FSM	ENSG00000269190.6	ENST00000599598.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTATGTGCTGGAAATG	-38948588	False	NA	NA	False	NA	NA	NA	38948603	38944727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38945105_38946471_38946568_38948566
WTC11_00047039	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	15.4693818605634	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-39388227	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
WTC11_00047040	chr19	-	423	3	FSM	ENSG00000006712.15	ENST00000597365.1	606	3	0	183	0	0	multi-exon	FALSE	canonical	3	200	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTAAGGAATGGGAA	-39388238	True	NA	NA	False	NA	NA	NA	39391117	39390068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39390162_39390259_39390290_39390817
WTC11_00047041	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	8683	junction_4	207.89104718578	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-39297445	True	NA	-17	True	AGTAAA	-15	NA	39435949	39433136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
WTC11_00047042	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3874.72547414652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297411	True	NA	-14	True	AATAAA	-32	NA	39435915	39433206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
WTC11_00047043	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	239.708619415786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297432	True	NA	-14	True	AATAAA	-32	NA	39435936	39433206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
WTC11_00047044	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	3601.52124108688	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-39297437	True	NA	-24	True	AATAAA	-22	NA	39435941	39433216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
WTC11_00047045	chr19	-	2395	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	-6	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	91.7327034862098	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-39297444	True	NA	-24	True	AATAAA	-22	NA	39435948	39433216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
WTC11_00047046	chr19	-	1035	2	FSM	ENSG00000105193.9	ENST00000595386.1	1035	2	0	0	0	0	multi-exon	FALSE	canonical	3	8842	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGTATAATAAACAGTT	-39434377	False	NA	-60	True	NA	NA	NA	39434390	39433252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521
WTC11_00047047	chr19	-	1871	1	FSM	ENSG00000176401.6	ENST00000326282.5	1866	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTCCCTTTTAATAT	-39529999	False	2853	0	True	AATAAA	-18	NA	39532852	39530981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39531000_39532900
WTC11_00047048	chr19	-	1455	1	FSM	ENSG00000176396.11	ENST00000390658.4	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATTCTTGTTTTCC	-39537308	True	NA	-6	True	TATAAA	-15	NA	39540161	39538706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39538700_39540200
WTC11_00047049	chr19	-	1136	10	NNC	ENSG00000105202.9	novel	1125	9	NA	NA	0	67542	intron_retention	TRUE	non_canonical	0	0	junction_1	796.132456874413	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTGATGCATCCTCTCC	-39797612	True	NA	NA	False	NA	NA	NA	39846357	39766915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_39766949_39834457_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
WTC11_00047050	chr19	-	1197	10	NNC	ENSG00000105202.9	novel	1125	9	NA	NA	-42	67542	intron_retention	FALSE	non_canonical	0	0	junction_1	972.749368199915	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTGATGCATCCTCTCC	-39797676	True	NA	NA	False	NA	NA	NA	39846421	39766915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_39766949_39834457_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840619_39840788_39846290
WTC11_00047051	chr19	-	2720	11	FSM	ENSG00000105204.14	ENST00000593685.5	2724	11	3	1	3	-1	multi-exon	FALSE	canonical	3	15	junction_10	17.7485210651479	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	-39830473	False	685	-5	True	AGTAAA	-13	NA	39833631	39825350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
WTC11_00047052	chr19	-	2495	11	FSM	ENSG00000105204.14	ENST00000323039.10	2496	11	0	1	0	-1	multi-exon	FALSE	canonical	3	36	junction_10	12.8234160815284	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	-39831004	False	3158	-5	True	AGTAAA	-13	NA	39834162	39825350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
WTC11_00047056	chr19	-	1400	5	FSM	ENSG00000105202.9	ENST00000599159.1	1400	5	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_3	266.963831819968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAATCAGGCAAGTTA	-39797631	True	NA	NA	False	NA	NA	NA	39846376	39838259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
WTC11_00047058	chr19	-	442	1	FSM	ENSG00000187534.6	ENST00000596581.1	442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATACAGGCCCTGGACC	-39943491	False	NA	NA	False	NA	NA	NA	39943680	39943238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39943200_39943700
WTC11_00047059	chr19	-	397	4	FSM	ENSG00000128000.17	ENST00000594811.1	444	4	0	47	0	-47	multi-exon	FALSE	canonical	1	1	junction_3	22.4548930574657	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCATGTGCTCAGAGAGG	-40054225	True	NA	NA	False	AGTAAA	-33	NA	40056106	40047327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40047471_40048669_40048797_40050323_40050378_40056033
WTC11_00047060	chr19	-	509	5	FSM	ENSG00000128000.17	ENST00000593605.1	509	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	20.5243757517738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTAAGTGAGAGTAAAG	-40054294	True	NA	NA	False	AGTAAA	-19	NA	40056175	40047378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40047471_40048669_40048797_40050323_40050378_40055415_40055577_40056100
WTC11_00047062	chr19	-	7423	5	FSM	ENSG00000197782.15	ENST00000599368.5	665	5	222	-6980	0	18	multi-exon	FALSE	canonical	3	80	junction_4	16.4525833837729	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGCAATACAAAATGG	-40088774	False	NA	15	True	AATAAA	-34	NA	40090235	40069133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165
WTC11_00047063	chr19	-	570	6	NNC	ENSG00000197782.15	novel	3600	6	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	44.4882006828777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAACTCTTGGCATTG	-40089406	True	NA	-7	True	AGTAAA	-28	NA	40090867	40076121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090735
WTC11_00047065	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	10.5538910068569	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-40275777	True	NA	-1	True	AATAAA	-18	NA	40285345	40230316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
WTC11_00047066	chr19	-	3107	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	21	-1333	-7	0	multi-exon	FALSE	canonical	3	15	junction_12	17.065844706769	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGGGCCCAGCCTGCA	-40275784	True	NA	-33	True	AATAAA	-13	NA	40285352	40232336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
WTC11_00047067	chr19	-	1188	10	FSM	ENSG00000105221.18	ENST00000578615.6	1188	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	20.3275644518277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTTCGATGATGAATTT	-40257017	False	NA	NA	False	NA	NA	NA	40257045	40235101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40241937_40242070_40242533_40242688_40255157_40255270_40256925
WTC11_00047074	chr19	-	4974	3	FSM	ENSG00000105227.16	ENST00000673881.1	4985	3	11	0	11	0	multi-exon	TRUE	canonical	3	11	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATTTGTCTCCTCTGT	-40403619	False	658	-4	True	AATAAA	-17	NA	40404277	40393765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40397971_40398619_40398817_40403705
WTC11_00047076	chr19	-	1365	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	-1	0	1	multi-exon	FALSE	canonical	3	134	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGTCTAATGTTTCTA	-40441495	True	NA	43	True	AATAAA	-18	NA	40444335	40440842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40442087_40444214
WTC11_00047078	chr19	-	776	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	-9	0	3	multi-exon	FALSE	canonical	0	0	junction_4	186.70632019297	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGACTCTTCCTCTC	-40463305	True	NA	-2	True	AATAAA	-39	NA	40465759	40447785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
WTC11_00047079	chr19	-	3605	10	FSM	ENSG00000105245.9	ENST00000252891.8	3561	10	-44	0	-44	0	multi-exon	FALSE	canonical	3	61	junction_3	14.3973591542784	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGTTGATTTTGTGC	-40689156	True	NA	0	True	TATAAA	-27	NA	40690695	40665904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
WTC11_00047082	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000678119.1	2350	14	0	15	0	1	multi-exon	FALSE	canonical	2	11	junction_13	50.2093840683264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCTTTTCTCTGCGC	-40714949	False	1607	-3	True	AATAAA	-18	NA	40714960	40691528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
WTC11_00047083	chr19	-	2223	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	-2	16	-2	0	multi-exon	FALSE	canonical	2	11	junction_14	48.4473204330524	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40714981	False	1607	-4	True	AATAAA	-17	NA	40714992	40691529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
WTC11_00047088	chr19	-	2591	13	FSM	ENSG00000123815.13	ENST00000678371.1	2606	13	0	15	0	1	multi-exon	FALSE	canonical	3	51	junction_12	40.9663649297269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCTTTTCTCTGCGC	-40716787	False	NA	-3	True	AATAAA	-18	NA	40716798	40691528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
WTC11_00047089	chr19	-	2583	14	FSM	ENSG00000123815.13	ENST00000677399.1	2598	14	0	15	0	1	multi-exon	FALSE	canonical	3	51	junction_13	39.8789588749098	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCTTTTCTCTGCGC	-40715275	True	NA	-3	True	AATAAA	-18	NA	40716882	40691528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
WTC11_00047090	chr19	-	2319	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	-38	16	0	0	multi-exon	FALSE	canonical	3	21	junction_15	54.9405335087149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715313	True	NA	-4	True	AATAAA	-17	NA	40716920	40691529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
WTC11_00047091	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	1	-1	0	1	multi-exon	FALSE	canonical	3	51	junction_14	38.5687829780532	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCTTTTCTCTGCGC	-40715278	True	NA	-3	True	AATAAA	-18	NA	40716885	40691528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
WTC11_00047098	chr19	-	3307	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	-5	0	0	multi-exon	FALSE	canonical	3	95	junction_2	31.0251510874645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-40747792	True	NA	-4	True	AATAAA	-19	NA	40750477	40740855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
WTC11_00047105	chr19	-	2714	7	FSM	ENSG00000105329.11	ENST00000221930.6	2780	7	32	34	32	-34	multi-exon	FALSE	canonical	3	68	junction_3	9.9958324649159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATCACTTGATCCTGGGA	-41353676	True	NA	NA	False	TTTAAA	-45	NA	41353890	41330356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41331211_41332127_41332282_41341882_41342031_41342169_41342248_41344746_41344865_41348294_41348456_41352689
WTC11_00047106	chr19	-	392	3	FSM	ENSG00000105329.11	ENST00000597453.1	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGCCGAGGTGACCTGG	-41348127	False	NA	NA	False	NA	NA	NA	41348341	41342020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41342248_41344746_41344865_41348294
WTC11_00047107	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-41363854	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
WTC11_00047109	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	252.881889426665	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	-41393782	True	NA	-57	True	NA	NA	NA	41397342	41386414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
WTC11_00047111	chr19	-	2566	5	NIC	ENSG00000105341.19	novel	1622	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	356	junction_4	23.4200768572607	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	-41435177	True	NA	-23	True	NA	NA	NA	41439936	41431338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
WTC11_00047112	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	154.169459434164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435151	True	NA	-2	True	ATTAAA	-19	NA	41439910	41431317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
WTC11_00047113	chr19	-	1643	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	-21	0	0	multi-exon	FALSE	canonical	3	55	junction_3	144.722795371013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435177	True	NA	-2	True	ATTAAA	-19	NA	41439936	41431317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
WTC11_00047121	chr19	-	445	2	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	53	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGTCTGTGTGTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	41542780	41542041	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_41542229_41542522
WTC11_00047122	chr19	-	661	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	-8	0	8	multi-exon	FALSE	canonical	3	106	junction_1	682.05255479325	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCTGTGGGTCTCTA	-41949186	True	NA	1	True	AATAAA	-36	NA	41959266	41956672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
WTC11_00047125	chr19	-	3597	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	-46	0	-6	0	multi-exon	FALSE	canonical	3	110	junction_17	17.0452121194882	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-41994265	False	NA	-4	True	AATATA	-18	NA	41994276	41966581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
WTC11_00047126	chr19	-	3876	22	FSM	ENSG00000105409.19	ENST00000441343.5	3818	22	-56	-2	0	2	multi-exon	FALSE	canonical	3	110	junction_16	17.4207632782631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGTGTTGTGCCTGC	-41990663	True	NA	-2	True	AATATA	-20	NA	41994270	41966579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
WTC11_00047127	chr19	-	3498	19	FSM	ENSG00000105737.10	ENST00000262895.7	3493	19	0	-5	0	5	multi-exon	FALSE	canonical	3	43	junction_8	11.0431253404075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCGTCTCTCATTTCCT	-42064464	False	45	0	True	AATAAA	-27	NA	42065770	41998315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41999300_42003331_42003454_42003554_42003684_42005722_42005949_42006644_42006811_42021300_42021475_42021946_42022057_42022240_42022355_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691
WTC11_00047128	chr19	-	4506	20	FSM	ENSG00000105737.10	ENST00000593562.6	4506	20	8	-8	8	5	multi-exon	FALSE	canonical	3	43	junction_8	11.0368308109271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCGTCTCTCATTTCCT	-42067669	True	NA	0	True	AATAAA	-27	NA	42070198	41998315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41999300_42003331_42003454_42003554_42003684_42005722_42005949_42006644_42006811_42021300_42021475_42021946_42022057_42022240_42022355_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
WTC11_00047131	chr19	-	3218	14	FSM	ENSG00000028277.22	ENST00000526816.6	3218	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.59374121929164	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAAACAAACAAACAATAA	-42132304	True	NA	NA	False	NA	NA	NA	42132427	42089789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42091592_42092068_42092271_42093828_42093896_42095285_42095463_42095544_42095694_42095787_42095930_42096081_42096244_42099526_42099619_42099715_42099822_42117249_42117367_42122125_42122183_42122343_42122379_42122510_42122577_42132383
WTC11_00047132	chr19	-	1716	13	FSM	ENSG00000028277.22	ENST00000529952.5	1716	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.3437398472938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGCCCTGCCATTGCTG	-42132350	True	NA	NA	False	NA	NA	NA	42132473	42091814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42092271_42093828_42093896_42095285_42095463_42095544_42095694_42095787_42095930_42096081_42096244_42099526_42099619_42099715_42099822_42117249_42117367_42122125_42122183_42122343_42122379_42122510_42122577_42132383
WTC11_00047133	chr19	-	673	3	FSM	ENSG00000028277.22	ENST00000598842.2	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACATGTATGTAAGA	-42095411	False	NA	NA	False	ATTAAA	-31	NA	42095611	42093466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42093896_42095285_42095463_42095544
WTC11_00047134	chr19	-	1988	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	246	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	96.6397951156769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCCTCTCTAGGACTCT	-42217236	False	2812	-9	True	ATTAAA	-27	NA	42217423	42198598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217293
WTC11_00047135	chr19	-	1883	5	FSM	ENSG00000160570.14	ENST00000336034.8	1882	5	0	-1	0	1	multi-exon	FALSE	canonical	3	23	junction_2	79.192802703276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCTCTAGGACTCTTT	-42214857	True	NA	-7	True	ATTAAA	-29	NA	42217669	42198596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215147_42215253_42216679_42217046_42217631
WTC11_00047136	chr19	-	1986	5	FSM	ENSG00000160570.14	ENST00000596251.6	1905	5	-80	-1	0	1	multi-exon	FALSE	canonical	3	154	junction_3	41.6593326878864	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCTCTAGGACTCTTT	-42214945	True	NA	-7	True	ATTAAA	-29	NA	42217757	42198596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217631
WTC11_00047137	chr19	-	1669	4	FSM	ENSG00000160570.14	ENST00000593804.5	1586	4	-64	-19	-49	1	multi-exon	FALSE	canonical	3	95	junction_3	69.0909223817106	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCTCTAGGACTCTTT	-42217619	False	NA	-7	True	ATTAAA	-29	NA	42217806	42198596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42217631
WTC11_00047144	chr19	-	2193	11	FSM	ENSG00000105723.13	ENST00000222330.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	31.8133619726052	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	-42238593	True	NA	-5	True	AATAAA	-16	NA	42242602	42230189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
WTC11_00047149	chr19	-	2680	4	FSM	ENSG00000105722.10	ENST00000222329.9	2672	4	0	-8	0	8	multi-exon	FALSE	canonical	3	71	junction_1	1.88561808316413	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCCTAGGTGCTCGG	-42250832	True	NA	-10	True	AATAAA	-25	NA	42255128	42247560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42254977
WTC11_00047150	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	30.2140511829991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	-42253885	False	4296	NA	False	NA	NA	NA	42253899	42249592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
WTC11_00047151	chr19	-	575	2	FSM	ENSG00000105722.10	ENST00000596818.1	566	2	0	-9	0	9	multi-exon	FALSE	canonical	3	75	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTTAGATGTGAGGA	-42250811	True	NA	NA	False	NA	NA	NA	42255107	42250120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42250566_42254977
WTC11_00047152	chr19	-	1056	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	-2	0	0	multi-exon	FALSE	canonical	3	931	junction_1	45.2493093869951	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-42302123	False	798	-22	True	ATTAAA	-17	NA	42302624	42297032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
WTC11_00047154	chr19	-	1141	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	-489	-3	-4	0	multi-exon	FALSE	canonical	3	56	junction_1	407.096042108002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-42302280	False	NA	-22	True	ATTAAA	-17	NA	42302781	42297032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
WTC11_00047158	chr19	-	372	2	ISM	ENSG00000105427.10	ENST00000222032.10	533	4	2810	0	2781	0	3prime_fragment	FALSE	canonical	3	269	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	-42384617	True	NA	0	True	AATAAA	-15	NA	42387487	42387018	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_42387243_42387339
WTC11_00047160	chr19	-	1066	4	FSM	ENSG00000079435.10	ENST00000599783.5	1367	4	301	0	301	0	multi-exon	FALSE	canonical	2	10	junction_1	0.942809041582063	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATCGACCCCGAGCT	-42423743	False	NA	NA	False	NA	NA	NA	42423822	42408086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42408122_42408231_42408323_42410306_42410843_42423418
WTC11_00047165	chr19	-	921	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	-1	0	1	multi-exon	FALSE	canonical	3	85	junction_4	12.9957257930786	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTTCTACCTATTTTC	-43525708	True	NA	1	True	AATAAA	-18	NA	43527201	43506717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
WTC11_00047173	chr19	-	9710	3	FSM	ENSG00000167378.10	ENST00000422989.6	9686	3	0	-24	0	24	multi-exon	FALSE	canonical	3	30	junction_1	1	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATGAAACATGTCCAGT	-43594983	True	NA	19	True	AATAAA	-44	NA	43596134	43584342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43593368_43594808_43595341_43595981
WTC11_00047175	chr19	-	1520	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	-352	-6	-352	6	multi-exon	FALSE	canonical	3	114	junction_2	16	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGGGTGAGTCATTTG	-43619966	False	NA	5	True	AATAGA	-24	NA	43619981	43607217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43608108_43614228_43614435_43619557
WTC11_00047176	chr19	-	2190	9	FSM	ENSG00000105767.3	ENST00000222374.3	2189	9	0	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_1	9.82025967070118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGGTGGCTGTGTGT	-43638774	True	NA	NA	False	ATTAAA	-17	NA	43639850	43622366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43623440_43624113_43624243_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
WTC11_00047177	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.9443741208437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	-43670151	False	NA	NA	False	AATAAA	-16	NA	43670166	43646094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
WTC11_00047178	chr19	-	1838	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-24	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	20.6700266085944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTATGCCCTTCTTTGTA	-43667760	True	NA	-9	True	CATAAA	-24	NA	43668344	43648572	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
WTC11_00047179	chr19	-	1211	6	FSM	ENSG00000011422.12	ENST00000601723.5	1205	6	0	-6	0	3	multi-exon	FALSE	canonical	0	0	junction_1	25.6390327430658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTATGCCCTTCTTTGTA	-43670138	False	NA	-9	True	CATAAA	-24	NA	43670153	43648572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43649144_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
WTC11_00047181	chr19	-	1555	6	FSM	ENSG00000011422.12	ENST00000221264.8	1610	6	62	-7	62	3	multi-exon	FALSE	canonical	2	5	junction_2	22.5707775674654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTATGCCCTTCTTTGTA	NA	False	NA	-9	True	CATAAA	-24	NA	43670485	43648572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43649144_43652224_43652372_43656478_43656641_43665315_43665460_43667580_43667692_43670065
WTC11_00047182	chr19	-	1747	6	ISM	ENSG00000011422.12	ENST00000340093.8	1368	7	1993	2	68	-1	3prime_fragment	FALSE	canonical	3	51	junction_1	7.6524505878836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCCAGGTATGCCCT	-43668161	False	NA	-17	True	CATAAA	-16	NA	43668176	43648580	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580
WTC11_00047186	chr19	-	1856	3	FSM	ENSG00000176222.9	ENST00000587539.2	1849	3	0	-7	0	7	multi-exon	FALSE	canonical	3	15	junction_2	2	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGTGATATTTTGAAAA	NA	False	NA	1	True	AATAAA	-22	NA	43883964	43872357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43874078_43880009_43880137_43883955
WTC11_00047187	chr19	-	5268	12	NNC	ENSG00000124459.12	novel	3926	10	NA	NA	0	1144	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	16.5883559679375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTATTCCAT	-43934249	True	NA	NA	False	NA	NA	NA	43935278	43911479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43929917_43930001_43931246_43931366_43932603_43932691_43934425_43934695_43934923
WTC11_00047188	chr19	-	5199	10	FSM	ENSG00000124459.12	ENST00000269973.10	3926	10	0	-1273	0	1273	multi-exon	FALSE	canonical	3	24	junction_7	12.3468394516348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTCTCCCACTTTT	-43934253	True	NA	NA	False	AATATA	-26	NA	43935282	43911350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43934923
WTC11_00047198	chr19	-	3650	4	FSM	ENSG00000062370.17	ENST00000354340.9	3660	4	12	-2	6	2	multi-exon	FALSE	canonical	1	2	junction_3	3.2659863237109	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTTTTTATTCTC	-44356288	True	NA	1	True	AATAAA	-17	NA	44356668	44326552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44329937_44336622_44336719_44340415_44340543_44356625
WTC11_00047199	chr19	-	3608	5	FSM	ENSG00000062370.17	ENST00000337401.8	3321	5	34	-321	28	-67	multi-exon	FALSE	canonical	2	4	junction_4	2.27760839478607	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTTGCAAGTATCCAA	-44356266	True	NA	-68	True	NA	NA	NA	44356646	44326621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44329937_44336622_44336719_44340415_44340543_44343253_44343303_44356625
WTC11_00047202	chr19	-	4257	5	FSM	ENSG00000167384.11	ENST00000592529.6	4248	5	0	-9	0	-6	multi-exon	FALSE	canonical	1	4	junction_4	19.536824204563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAACATTCTTCATATTC	-44500495	False	NA	NA	False	AATAAA	-24	NA	44500522	44474433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500274
WTC11_00047204	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.4308696896618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-44500497	False	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
WTC11_00047207	chr19	-	763	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	-5	0	0	multi-exon	FALSE	canonical	3	203	junction_5	141.481588908239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
WTC11_00047208	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	215.919545201448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
WTC11_00047209	chr19	-	691	5	NIC	ENSG00000007255.10	novel	805	6	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	210.719007211025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACTCAGAGCAGTGGG	-45172623	True	NA	-11	True	AATAAA	-16	NA	45178223	45162933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_45163224_45164163_45164248_45164852_45164971_45165126_45165195_45178092
WTC11_00047210	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	116.976236903057	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
WTC11_00047211	chr19	-	761	6	NNC	ENSG00000007255.10	novel	758	6	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	220.325214172141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGACTCAGAGCAGTG	-45172606	True	NA	-13	True	AATAAA	-14	NA	45178206	45162935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45163224_45163915_45164010_45164163_45164285_45164852_45164971_45165126_45165195_45178134
WTC11_00047215	chr19	-	3110	24	FSM	ENSG00000104884.17	ENST00000682414.1	3110	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.5866680724915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGGAGGATTTCTT	-45364966	True	NA	NA	False	GGGGCT	-30	NA	45370588	45350412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
WTC11_00047219	chr19	-	1538	12	FSM	ENSG00000104884.17	ENST00000485403.6	1538	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	42.0261626502758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTTGTGTTGGAATA	-45364762	False	NA	NA	False	AATAAA	-44	NA	45370384	45358758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45358913_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132
WTC11_00047221	chr19	-	1096	4	ISM	ENSG00000104881.16	ENST00000587270.5	2512	6	7210	-4	146	4	3prime_fragment	TRUE	canonical	3	42	junction_2	23.7907545067406	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTCTCTTTTGATTCT	-45385931	False	NA	-1	True	AATAAA	-22	NA	45385957	45379633	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823
WTC11_00047222	chr19	-	2366	6	FSM	ENSG00000104881.16	ENST00000587270.5	2512	6	146	0	146	0	multi-exon	FALSE	canonical	2	42	junction_2	20.8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	-45393011	False	NA	-5	True	AATAAA	-18	NA	45393021	45379637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879
WTC11_00047223	chr19	-	3380	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	-1	0	1	multi-exon	FALSE	canonical	3	138	junction_9	74.1136931084455	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTCACCTCTAATT	-45421730	True	NA	0	True	AATAAA	-20	NA	45423917	45407332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
WTC11_00047224	chr19	-	1484	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	866	-456	0	334	3prime_fragment	FALSE	canonical	3	210	junction_1	58.7684811357244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAAGGTCATCCGGC	-45423459	False	NA	NA	False	NA	NA	NA	45423501	45409211	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
WTC11_00047225	chr19	-	1259	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	-310	0	242	multi-exon	FALSE	canonical	3	55	junction_2	108.183799041261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCAGGCTCTAGTGGCT	-45423797	False	NA	NA	False	NA	NA	NA	45423839	45409303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
WTC11_00047226	chr19	-	271	3	ISM	ENSG00000012061.16	ENST00000591636.5	836	6	4322	-5	7	0	3prime_fragment	FALSE	canonical	3	25	junction_1	142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45419137	False	NA	-8	True	AATAAA	-22	NA	45419179	45409613	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45409726_45416820_45416898_45419097
WTC11_00047228	chr19	-	1010	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	338	0	0	0	3prime_fragment	FALSE	canonical	3	55	junction_2	105.253241745607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423459	False	NA	-8	True	AATAAA	-22	NA	45423501	45409613	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
WTC11_00047229	chr19	-	940	9	NIC	ENSG00000012061.16	novel	949	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	118.71604777788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423830	False	NA	-8	True	AATAAA	-22	NA	45423872	45409613	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
WTC11_00047230	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	89.0006242175363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	-45424325	False	NA	-62	True	NA	NA	NA	45424367	45409667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
WTC11_00047231	chr19	-	1269	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	9	0	9	0	multi-exon	FALSE	canonical	3	240	junction_2	52.7059614023588	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-45423515	False	NA	0	True	AATAAA	-17	NA	45423557	45413433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
WTC11_00047232	chr19	-	1108	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	-33	3825	0	-3	5prime_fragment	FALSE	canonical	3	55	junction_1	114.10861277837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATGGTGGTGTGAGCTT	-45423830	False	NA	-5	True	AATAAA	-12	NA	45423872	45413438	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
WTC11_00047235	chr19	-	2069	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	11	-17	3	17	multi-exon	FALSE	canonical	3	60	junction_6	48.4424056655599	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGAACCCTCCAGTTGT	-45496490	True	NA	-6	True	AATAAA	-33	NA	45497044	45485276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
WTC11_00047236	chr19	-	2461	11	FSM	ENSG00000125744.12	ENST00000590526.5	2357	11	-9	-95	-9	95	multi-exon	FALSE	canonical	3	9	junction_10	63.0831990311208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGGAGCTCCCTCTG	-45496510	True	NA	72	True	NA	NA	NA	45497064	45485198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495215_45496791
WTC11_00047242	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-45583334	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45553912_45584622
WTC11_00047243	chr19	-	2238	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	-4	0	4	multi-exon	FALSE	canonical	3	16	junction_18	24.959535153158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGGTCTATGTATTTG	-45639379	False	657	-15	True	AATAAA	-19	NA	45639397	45609395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
WTC11_00047244	chr19	-	2797	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	-6	0	4	multi-exon	FALSE	canonical	3	28	junction_19	26.7930677736915	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGGTCTATGTATTTG	-45643070	True	NA	-15	True	AATAAA	-19	NA	45643727	45609395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
WTC11_00047250	chr19	-	1143	1	FSM	ENSG00000125746.18	ENST00000588420.1	2362	1	-5	1224	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGACTGGGGCGGCGTC	-45642765	False	NA	NA	False	AAAAAG	-6	NA	45642783	45641640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45641600_45642800
WTC11_00047251	chr19	-	532	4	NNC	ENSG00000125743.11	novel	615	4	NA	NA	0	35180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4020.70798077486	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCAGCTAATTTTTA	-45643955	True	NA	NA	False	NA	NA	NA	45691941	45652279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45652309_45687459_45687728_45688386_45688567_45691886
WTC11_00047252	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	7559	junction_2	844	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643967	True	NA	-15	True	AATAAA	-19	NA	45691953	45687459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45691886
WTC11_00047253	chr19	-	952	3	FSM	ENSG00000125743.11	ENST00000588599.5	805	3	-146	-1	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4611.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643931	True	NA	-17	True	AATAAA	-17	NA	45691917	45687461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45691411
WTC11_00047254	chr19	-	616	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	-1	0	0	multi-exon	FALSE	canonical	3	133	junction_3	4277.64930254404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643955	True	NA	-17	True	AATAAA	-17	NA	45691941	45687461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
WTC11_00047255	chr19	-	739	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	-36	-1	-36	0	multi-exon	FALSE	canonical	3	6	junction_3	4017.92143609935	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45692337	False	NA	-17	True	AATAAA	-17	NA	45692352	45687461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
WTC11_00047257	chr19	-	3459	3	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-29	24	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	2.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGAAGGGAGGGTTTGG	-45727572	True	NA	18	True	TATAAA	-39	NA	45730925	45710604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45713574_45723472_45723886_45730848
WTC11_00047261	chr19	-	4048	28	NNC	ENSG00000125755.19	novel	4077	27	NA	NA	0	53986	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	49.4714727069751	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCAGGCGCAGTGGCTC	-45848062	True	NA	NA	False	NA	NA	NA	45863130	45761423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45761452_45815449_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
WTC11_00047262	chr19	-	3347	3	FSM	ENSG00000177045.11	ENST00000317578.7	3344	3	0	-3	0	3	multi-exon	FALSE	canonical	3	67	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTGGGGTGCCTTCCA	-45765115	True	NA	-2	True	AATAAA	-24	NA	45769252	45764781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45766112_45766349_45767156_45768041
WTC11_00047263	chr19	-	1809	2	FSM	ENSG00000177045.11	ENST00000560160.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTGCCGCTGTGTCT	-45768579	False	NA	-18	True	NA	NA	NA	45768627	45764888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45766112_45768041
WTC11_00047270	chr19	-	6497	19	Fusion	ENSG00000104936.20_ENSG00000185800.12	novel	2754	15	NA	NA	0	0	multi-exon	TRUE	non_canonical	2	18	junction_15	34.6199828116154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCCATCTGCCCAAAG	-45790716	True	NA	-28	True	AATAAA	-2	NA	45792802	45769735	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770231_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192_45784291_45785593_45786872_45790904_45791088_45792315
WTC11_00047272	chr19	-	6548	20	Fusion	ENSG00000104936.20_ENSG00000185800.12	novel	2920	16	NA	NA	0	0	multi-exon	FALSE	non_canonical	2	18	junction_15	33.4481034330603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCGACCCTCGC	-45790716	True	NA	-56	True	NA	NA	NA	45792802	45769763	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770231_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
WTC11_00047278	chr19	-	4915	4	FSM	ENSG00000104936.20_ENSG00000185800.12	ENST00000377735.7	3292	4	0	-1623	0	1623	multi-exon	FALSE	canonical	3	60	junction_1	44.8280666051477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAAGCCCAGGACTCG	-45790716	True	NA	NA	False	NA	NA	NA	45792802	45781323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45784291_45785593_45786872_45790904_45791088_45792315
WTC11_00047281	chr19	-	790	3	ISM	ENSG00000125755.19	ENST00000598364.1	995	4	443	-18	443	-2	3prime_fragment	FALSE	canonical	3	279	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGTTACTGAAAAGAAAA	-45816661	False	291	-8	True	AATAAA	-15	NA	45816690	45815449	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45815698_45815850_45816184_45816481
WTC11_00047282	chr19	-	5111	26	FSM	ENSG00000125755.19	ENST00000593504.5	5107	26	0	-4	0	4	multi-exon	FALSE	canonical	3	182	junction_17	25.1155410055209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGATGGCGGGCCTGGGGC	-45848076	True	NA	18	True	AATAAA	-41	NA	45863144	45815423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
WTC11_00047284	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.3447461820136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	-45816842	True	NA	13	True	AAAAAG	-4	NA	45817133	45815467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
WTC11_00047286	chr19	-	5464	22	FSM	ENSG00000125755.19	ENST00000599460.5	5449	22	0	-15	0	15	multi-exon	FALSE	canonical	3	182	junction_13	17.6382135139509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGGGGAAGGGCTTC	-45848062	True	NA	9	True	AATAAA	-31	NA	45863130	45818897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
WTC11_00047290	chr19	-	1899	3	FSM	ENSG00000176182.6	ENST00000322217.6	1896	3	0	-3	0	3	multi-exon	FALSE	canonical	3	8	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGCTCTGTCTGAGAC	-45901447	True	NA	NA	False	AATAAA	-20	NA	45902613	45890019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45891324_45901274_45901826_45902569
WTC11_00047292	chr19	-	461	1	FSM	ENSG00000277531.3	ENST00000617053.3	4240	1	3725	54	3725	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCTCTTTTGTACAAA	-46425105	False	NA	NA	False	NA	NA	NA	46425211	46424750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46424800_46425200
WTC11_00047294	chr19	-	3688	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	8	-12	8	0	multi-exon	FALSE	canonical	3	75	junction_1	5.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTAGGTGAGGATT	-46468997	True	NA	-9	True	AATAAA	-27	NA	46471555	46466490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46468578_46469732_46471115_46471336
WTC11_00047295	chr19	-	611	2	FSM	ENSG00000230510.8	ENST00000595691.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATAGCAAGTCCTATGT	-46489686	False	NA	NA	False	AATATA	-16	NA	46490120	46481084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46481441_46489865
WTC11_00047299	chr19	-	2840	4	FSM	ENSG00000197380.11	ENST00000391916.7	2939	4	99	0	55	0	multi-exon	TRUE	canonical	3	11	junction_1	0.942809041582063	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGCAACTTCTGTT	-46661006	True	NA	61	True	ATTAAA	-34	NA	46661083	46647550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46649873_46652659_46652813_46652978_46653076_46660815
WTC11_00047300	chr19	-	2934	10	NNC	ENSG00000105281.12	novel	2882	8	NA	NA	0	117536	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	372.990848198057	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTCATTTAATCCTCAC	-46764461	True	NA	NA	False	NA	NA	NA	46788594	46657346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_46657372_46708308_46708336_46774882_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
WTC11_00047302	chr19	-	3458	19	NIC	ENSG00000105287.13	novel	3321	19	NA	NA	0	246	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	50.2095608425328	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATTTTTTATTTGGT	-46712969	True	NA	56	True	AAAAAG	-19	NA	46717112	46674028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716950
WTC11_00047304	chr19	-	3329	19	FSM	ENSG00000105287.13	ENST00000433867.5	3321	19	14	-22	-1	19	multi-exon	FALSE	canonical	3	42	junction_18	45.9309734382764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTACCAACATGGA	-46712970	True	NA	13	True	NA	NA	NA	46717113	46674294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716814
WTC11_00047309	chr19	-	2694	8	FSM	ENSG00000090372.15	ENST00000594581.5	2692	8	0	-2	0	0	multi-exon	FALSE	canonical	3	768	junction_3	76.0144991539946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	-46726165	False	NA	-8	True	AATAAA	-14	NA	46726265	46719510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720339_46720535_46720772_46721985_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472
WTC11_00047310	chr19	-	3176	18	FSM	ENSG00000090372.15	ENST00000263280.11	3176	18	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_10	81.693748304939	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	-46733321	True	NA	-8	True	AATAAA	-14	NA	46746450	46719510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
WTC11_00047312	chr19	-	788	5	FSM	ENSG00000090372.15	ENST00000600615.5	788	5	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_3	80.2289692068893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGGTTGAGGCCTTAGA	-46723111	False	NA	NA	False	NA	NA	NA	46723211	46720408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113
WTC11_00047313	chr19	-	1602	11	FSM	ENSG00000090372.15	ENST00000595357.5	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_8	223.8991067423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACGAGGAGGCCATCC	-46730792	False	100	NA	False	NA	NA	NA	46730857	46720698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720772_46721985_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727568_46727893_46728008_46728617_46728778_46730731
WTC11_00047322	chr19	-	2882	8	FSM	ENSG00000105281.12	ENST00000542575.6	2882	8	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_7	92.8512086015875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTTCTTGAGAATTT	-46764461	True	NA	-5	True	AATAAA	-21	NA	46788594	46774882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
WTC11_00047326	chr19	-	918	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	2	-22	2	0	multi-exon	FALSE	canonical	3	374	junction_4	853.448006617861	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46850284	False	NA	18	True	NA	NA	NA	46850314	46838135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
WTC11_00047327	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	981.853699641652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46850605	False	NA	18	True	NA	NA	NA	46850777	46838135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
WTC11_00047328	chr19	-	658	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	-22	0	0	multi-exon	FALSE	canonical	3	175	junction_3	1074.25229811251	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46831482	True	NA	18	True	NA	NA	NA	46850834	46838135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
WTC11_00047329	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_4	352.97547719353	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	-46831494	True	NA	-13	True	AATAAA	-19	NA	46850846	46838166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
WTC11_00047331	chr19	-	316	4	FSM	ENSG00000042753.12	ENST00000601649.1	315	4	0	-1	0	0	multi-exon	FALSE	canonical	3	98	junction_2	983.499308026645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCGAGCCCCACCCCG	-46850736	False	NA	NA	False	NA	NA	NA	46850766	46838445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46845992_46846143_46850763
WTC11_00047332	chr19	-	557	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	-3	0	3	multi-exon	FALSE	canonical	3	1621	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGCTGGTGCGTTT	-46831473	True	NA	1	True	ATTAAA	-25	NA	46850825	46845647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46846143_46850763
WTC11_00047333	chr19	-	687	4	NNC	ENSG00000130748.7	novel	655	3	NA	NA	0	15273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	486.985511990746	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGGCCAGGCACGGTG	-47045167	True	NA	NA	False	AAAAAG	-1	NA	47048624	47030635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_47030668_47045908_47046253_47046592_47046686_47048406
WTC11_00047337	chr19	-	1747	1	FSM	ENSG00000105327.18	ENST00000601438.2	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTCTGCTTGCCTTC	-47222503	False	NA	-5	True	AATAAA	-20	NA	47222568	47220821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47220800_47222600
WTC11_00047340	chr19	-	1500	3	FSM	ENSG00000105327.18	ENST00000341983.8	1538	3	40	-2	40	0	multi-exon	FALSE	canonical	1	1	junction_2	105.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTCTGCTTGCCTTC	-47232714	False	NA	-5	True	AATAAA	-20	NA	47232726	47220821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47221919_47226563_47226755_47232514
WTC11_00047342	chr19	-	1918	13	FSM	ENSG00000105419.18	ENST00000561293.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	51.3425316434197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACCAACTGGAGTTCT	-47419214	False	NA	-14	True	GATAAA	-15	NA	47419288	47403125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
WTC11_00047344	chr19	-	2029	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	-8	0	8	multi-exon	FALSE	canonical	3	110	junction_8	25.8632890836069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTTCTTGTGTCTATC	-47418355	True	NA	-4	True	GATAAA	-25	NA	47419527	47403115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
WTC11_00047345	chr19	-	2112	13	FSM	ENSG00000105419.18	ENST00000331559.9	2104	13	0	-8	0	8	multi-exon	FALSE	canonical	3	6	junction_5	54.5142692838816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTTCTTGTGTCTATC	-47418351	True	NA	-4	True	GATAAA	-25	NA	47419523	47403115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
WTC11_00047349	chr19	-	4763	10	FSM	ENSG00000118160.14	ENST00000236877.11	4959	10	0	196	0	-196	multi-exon	FALSE	canonical	2	3	junction_6	4.00308522992263	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTCGTGCTTCAGCC	-47471380	True	NA	NA	False	NA	NA	NA	47471893	47428212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168_47441187_47441336_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
WTC11_00047350	chr19	-	1645	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	-9	0	9	multi-exon	FALSE	canonical	3	117	junction_6	24.8186813136549	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGATTCTTTTTTTCG	-47481500	True	NA	-7	True	NA	NA	NA	47484219	47475140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
WTC11_00047351	chr19	-	806	8	FSM	ENSG00000118162.14	ENST00000595554.1	806	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	51.638065377378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGGCGGCCAGAAGTC	-47481457	True	NA	NA	False	NA	NA	NA	47484176	47476843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483934
WTC11_00047354	chr19	-	1894	1	FSM	ENSG00000279861.1	ENST00000624088.1	1882	1	-16	4	-16	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	-47489517	False	NA	-8	True	AATAAA	-15	NA	47489535	47487641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47487600_47489500
WTC11_00047355	chr19	-	558	5	FSM	ENSG00000105402.8	ENST00000594217.5	554	5	0	-4	0	0	multi-exon	FALSE	canonical	3	41	junction_1	240.463484753923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTTCCTCCTCACC	-47492026	False	NA	-4	True	AATAAA	-19	NA	47492044	47487637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014
WTC11_00047356	chr19	-	3796	5	FSM	ENSG00000105402.8	ENST00000597778.5	3898	5	98	4	98	0	multi-exon	FALSE	canonical	3	560	junction_1	33.380383460949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	47496998	47487641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47493494_47495549
WTC11_00047357	chr19	-	1270	12	NIC	ENSG00000105402.8	novel	1662	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	168.085623595548	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	-47506971	True	NA	-8	True	AATAAA	-15	NA	47515020	47487641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
WTC11_00047358	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	38.5985751032341	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-47507014	True	NA	-3	True	AATAAA	-20	NA	47515063	47487636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
WTC11_00047361	chr19	-	1435	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	-18	0	0	multi-exon	FALSE	canonical	3	172	junction_8	152.166027746012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAACAACACTTTTG	-47507009	True	NA	-28	True	AAGAAA	-4	NA	47515058	47487661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
WTC11_00047371	chr19	-	3122	28	NIC	ENSG00000105486.14	novel	3125	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	163	junction_22	107.741052671333	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	-48164301	True	NA	-9	True	AATAAA	-18	NA	48170344	48115444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
WTC11_00047379	chr19	-	5123	11	FSM	ENSG00000105483.18	ENST00000447740.6	5210	11	0	87	0	-87	multi-exon	FALSE	canonical	2	16	junction_10	9.12633551870629	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATCTTGAAGTAGAAC	-48248921	False	NA	NA	False	NA	NA	NA	48249847	48208190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750
WTC11_00047380	chr19	-	5464	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	41	105	0	-87	multi-exon	FALSE	canonical	2	20	junction_9	18.4948417564907	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATCTTGAAGTAGAAC	-48254945	True	NA	NA	False	NA	NA	NA	48255871	48208190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
WTC11_00047383	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27.7168220079832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	-48254967	True	NA	-6	True	ATTAAA	-16	NA	48255893	48238333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
WTC11_00047384	chr19	-	659	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	27	-72	0	-2	multi-exon	FALSE	canonical	3	56	junction_2	12.3161479367536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTCTTCTTTGTTAT	-48254945	True	NA	64	True	CATAAA	-15	NA	48255871	48238263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
WTC11_00047385	chr19	-	2454	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	-177	-5	-177	0	multi-exon	FALSE	canonical	3	50	junction_5	33.8312807259133	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-48363988	True	NA	NA	False	AATAAA	-19	NA	48364236	48332355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
WTC11_00047386	chr19	-	2525	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	-258	-4	-139	4	multi-exon	FALSE	canonical	3	80	junction_6	26.6105702490494	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTACTCTTAACGCACTG	-48363950	False	NA	NA	False	AATAAA	-23	NA	48364198	48332351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
WTC11_00047388	chr19	-	1527	6	NNC	ENSG00000105438.9	novel	1550	5	NA	NA	0	25681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	410.54373701227	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGCTGTGGCTCAC	-48362154	True	NA	NA	False	NA	NA	NA	48391502	48356893	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48356920_48382574_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
WTC11_00047389	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_4	65.0499807840095	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-48362203	True	NA	-15	True	AATAAA	-16	NA	48391551	48382574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
WTC11_00047390	chr19	-	586	2	ISM	ENSG00000142235.13	ENST00000648216.1	2222	5	7231	0	7231	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCCTGTGCGTATTT	-48490920	True	NA	-6	True	AAAAAG	-24	NA	48491174	48485270	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48485790_48491107
WTC11_00047391	chr19	-	612	6	FSM	ENSG00000063177.13	ENST00000084795.9	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	4876	junction_4	241.577647972655	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48617870	False	NA	-35	True	ATTAAA	-17	NA	48617884	48615330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790
WTC11_00047393	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1862.01474662975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	-48416495	True	NA	-40	True	ATTAAA	-12	NA	48619176	48615335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
WTC11_00047394	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_5	634.086240191348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	-48416496	True	NA	-70	True	NA	NA	NA	48619177	48615365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
WTC11_00047395	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	1961.24574923412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	-48619113	False	NA	-97	True	NA	NA	NA	48619127	48615392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
WTC11_00047399	chr19	-	1895	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	-180	0	-180	0	multi-exon	FALSE	canonical	3	208	junction_4	18.533331459832	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-48646355	False	NA	-2	True	ATTAAA	-21	NA	48646367	48637945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
WTC11_00047401	chr19	-	4185	4	NNC	ENSG00000174951.12	novel	815	3	NA	NA	82	81333	intron_retention	FALSE	non_canonical	0	0	junction_1	16.0485374896143	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCTGTGAACCCCCT	-48753550	False	NA	NA	False	NA	NA	NA	48753578	48666677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48666705_48748012_48751284_48752489_48753123_48753324
WTC11_00047402	chr19	-	1110	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2858	-260	2744	-11	3prime_fragment	FALSE	canonical	2	12	junction_1	4	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTGGGTGCGGTGGC	-48713701	True	NA	-11	True	ATTAAA	-7	NA	48714099	48712735	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48713551_48713715_48713771_48713859
WTC11_00047403	chr19	-	980	4	FSM	ENSG00000105538.10	ENST00000601530.1	1597	4	621	-4	621	2	multi-exon	FALSE	canonical	3	42	junction_3	2.44948974278318	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCGATTGTTAAGACTCA	-48724943	False	NA	-21	True	AATAAA	-22	NA	48724960	48720582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716
WTC11_00047406	chr19	-	1270	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	2	0	0	multi-exon	FALSE	canonical	3	18	junction_8	74.5398383416546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48809994	True	NA	-2	True	AATAAA	-16	NA	48811012	48795063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
WTC11_00047407	chr19	-	2042	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	-1	0	0	multi-exon	TRUE	canonical	1	3	junction_11	87.28854023409	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810009	True	NA	-2	True	AATAAA	-16	NA	48811027	48795063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
WTC11_00047408	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_10	42.6765743704904	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810011	True	NA	-2	True	AATAAA	-16	NA	48811029	48795063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
WTC11_00047410	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	60.4668504223595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	-48810906	False	NA	-2	True	NA	NA	NA	48810916	48795109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
WTC11_00047411	chr19	-	1635	11	NNC	ENSG00000105552.15	novel	1579	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	67.8465916608933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTGTCGGGCTTCTTCA	-48810904	False	NA	-4	True	AATAAA	-14	NA	48810914	48795065	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810794
WTC11_00047414	chr19	-	733	6	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	61	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	46.978292859575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836419	False	NA	-5	True	CATAAA	-19	NA	48836430	48813017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48834275_48834359_48835804_48835844_48836323
WTC11_00047416	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.2854963017141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836076	True	NA	-5	True	CATAAA	-19	NA	48836491	48813017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
WTC11_00047424	chr19	-	917	1	FSM	ENSG00000225950.8	ENST00000593537.1	932	1	-12	27	-12	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCCTCAGATCAACTC	-49061995	False	NA	26	True	NA	NA	NA	49062009	49061092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49061100_49062000
WTC11_00047426	chr19	-	2446	11	FSM	ENSG00000074219.14	ENST00000377214.8	2440	11	0	-6	0	1	multi-exon	FALSE	canonical	3	126	junction_7	89.7097542076668	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49360392	False	NA	-3	True	GATAAA	-18	NA	49360438	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843
WTC11_00047427	chr19	-	2194	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	-3	0	3	multi-exon	FALSE	canonical	3	18	junction_12	128.980914824205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGATTTATTTGAGGTTT	-49361449	False	5819	-1	True	GATAAA	-20	NA	49361495	49340591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
WTC11_00047429	chr19	-	2218	13	NIC	ENSG00000074219.14	novel	2164	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	143.277314634554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49356588	True	NA	-3	True	GATAAA	-18	NA	49362407	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49348956_49349060_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
WTC11_00047431	chr19	-	2176	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_12	123.832183709334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49356597	True	NA	-3	True	GATAAA	-18	NA	49362416	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
WTC11_00047447	chr19	-	1232	9	FSM	ENSG00000142546.14	ENST00000596358.6	1232	9	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_8	93.6839767516303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAACATGGTGAAACCTT	-49574837	True	NA	NA	False	NA	NA	NA	49580556	49555467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
WTC11_00047449	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	197.393483935007	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574839	True	NA	-2	True	AATAAA	-18	NA	49580558	49555710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
WTC11_00047453	chr19	-	1695	7	FSM	ENSG00000126456.16	ENST00000309877.11	1691	7	0	-4	0	1	multi-exon	FALSE	canonical	3	351	junction_3	64.6419626352212	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGTGTCTGGTGTTGG	-49665154	False	NA	-29	True	AATAAA	-21	NA	49665169	49659567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
WTC11_00047455	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.975450444404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
WTC11_00047456	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	177.720454647179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665716	False	NA	-40	True	AATAAA	-10	NA	49665731	49659578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
WTC11_00047457	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	182.418558848174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-49659642	True	NA	-93	True	NA	NA	NA	49665842	49659631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
WTC11_00047462	chr19	-	1503	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	-24	0	0	multi-exon	FALSE	canonical	3	29	junction_8	67.5224699682801	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810579	True	NA	0	True	AATAAA	-41	NA	49813175	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
WTC11_00047463	chr19	-	1541	10	FSM	ENSG00000010361.14	ENST00000525130.5	1538	10	0	-3	0	0	multi-exon	FALSE	canonical	3	36	junction_8	65.4862156827255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810594	True	NA	0	True	AATAAA	-41	NA	49813190	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
WTC11_00047464	chr19	-	1548	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	-24	0	0	multi-exon	FALSE	canonical	3	25	junction_10	68.855210405604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810653	True	NA	0	True	AATAAA	-41	NA	49813249	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
WTC11_00047465	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_9	37.4112282610448	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810696	True	NA	0	True	AATAAA	-41	NA	49813292	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
WTC11_00047480	chr19	-	2224	14	FSM	ENSG00000039650.12	ENST00000594661.5	2111	14	0	-113	0	113	multi-exon	TRUE	canonical	3	230	junction_11	24.1959456724107	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTACCGAGGGGAGTC	-49863401	False	NA	NA	False	NA	NA	NA	49867010	49861090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864404_49865126_49865427_49866398
WTC11_00047481	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	67.6438385138579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863625	False	3720	-1	True	AATAAA	-17	NA	49867234	49861203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
WTC11_00047483	chr19	-	373	3	FSM	ENSG00000039650.12	ENST00000597965.2	351	3	0	-22	0	0	multi-exon	FALSE	canonical	3	282	junction_2	3.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49858056	False	NA	-28	True	NA	NA	NA	49861776	49861230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861511_49861607_49861696_49861771
WTC11_00047484	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	24.4834638072312	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49867249	False	NA	-28	True	NA	NA	NA	49867286	49861230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
WTC11_00047485	chr19	-	849	6	FSM	ENSG00000039650.12	ENST00000593706.3	849	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	22.9904327927945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGCCATCGACAACACAA	-49864033	False	NA	NA	False	NA	NA	NA	49864062	49861816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963
WTC11_00047486	chr19	-	986	7	FSM	ENSG00000039650.12	ENST00000599543.3	986	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	89.6153818642016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGGCTGGAAGGGAGG	-49867783	False	NA	NA	False	NA	NA	NA	49867909	49863965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867678
WTC11_00047489	chr19	-	3495	4	Fusion	ENSG00000213024.12_ENSG00000039650.12	novel	782	4	NA	NA	47	0	intron_retention	FALSE	non_canonical	0	0	junction_1	55.4276304943863	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGGGCTCTCTGGGG	-49928834	False	NA	NA	False	NA	NA	NA	49929362	49865380	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_49865627_49906827_49909885_49927693_49927849_49929325
WTC11_00047495	chr19	-	3639	4	FSM	ENSG00000204673.11	ENST00000391833.5	3640	4	0	1	0	0	multi-exon	FALSE	canonical	3	268	junction_3	22.2161102706022	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGTTGTGAGTG	-49875275	False	NA	NA	False	ATTAAA	-22	NA	49875285	49869038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916
WTC11_00047500	chr19	-	3075	5	FSM	ENSG00000204673.11	ENST00000391835.1	3075	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	57.308376351106	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGAAGTGTGTT	-49878018	False	122	NA	False	ATTAAA	-15	NA	49878028	49869045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49876602
WTC11_00047502	chr19	-	3484	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	-5	0	5	multi-exon	FALSE	canonical	3	280	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTAATATGGATAAATG	-49929216	False	NA	4	True	AATAAA	-24	NA	49929744	49906819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49929325
WTC11_00047503	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-49918160	True	NA	-1	True	NA	NA	NA	49929443	49908104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49927693_49927849_49929325
WTC11_00047504	chr19	-	3591	2	FSM	ENSG00000213024.12	ENST00000596217.1	3590	2	0	-1	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-49918221	True	NA	-1	True	NA	NA	NA	49929504	49908104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49927693
WTC11_00047509	chr19	-	1926	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	-3	0	3	multi-exon	FALSE	canonical	3	30	junction_14	48.4951081059119	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTCAGTTATCTGTA	-50022535	True	NA	-3	True	AATAAA	-17	NA	50025372	49976464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
WTC11_00047516	chr19	-	1868	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	-42	5	0	-5	multi-exon	FALSE	canonical	3	30	junction_12	65.0608155668389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGATCTTTCCTCATCA	-50022532	True	NA	-19	True	AATAAA	-14	NA	50025369	49981704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
WTC11_00047523	chr19	-	549	2	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCTCTTGTCACC	NA	False	NA	NA	False	NA	NA	NA	50318985	50316100	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_50316548_50318883
WTC11_00047524	chr19	-	1226	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	-1	0	1	multi-exon	FALSE	canonical	3	45	junction_3	6.67083203206317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCCACGAGCGGTTT	-50476727	False	NA	NA	False	AATAAA	-23	NA	50476746	50466786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
WTC11_00047526	chr19	-	834	5	FSM	ENSG00000161677.12	ENST00000598418.6	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.06155281280883	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-50511076	True	NA	0	True	AATAAA	-18	NA	50511191	50505997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510449_50511116
WTC11_00047528	chr19	-	3306	3	FSM	ENSG00000131409.13	ENST00000652263.1	3348	3	42	0	42	0	multi-exon	FALSE	canonical	2	2	junction_2	5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGAGGAGAGAAAACAA	-50568320	False	NA	-2	True	AGTAAA	-25	NA	50568393	50516891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50519416_50548541_50548874_50567943
WTC11_00047529	chr19	-	2915	9	FSM	ENSG00000213023.11	ENST00000338916.8	2915	9	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_3	25.094508861502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-50637308	False	NA	0	True	AATAAA	-25	NA	50638045	50621976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263
WTC11_00047530	chr19	-	2836	11	FSM	ENSG00000213023.11	ENST00000593901.5	2836	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	75.3312684082779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-50639090	True	NA	0	True	AATAAA	-25	NA	50639827	50621976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637791_50639024_50639163_50639789
WTC11_00047534	chr19	-	1904	5	FSM	ENSG00000167747.16	ENST00000598463.5	1844	5	-60	0	-60	0	multi-exon	FALSE	canonical	2	4	junction_4	1078.93037310106	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50803575	False	NA	-18	True	CATAAA	-19	NA	50803935	50797703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50803552
WTC11_00047537	chr19	-	1708	2	FSM	ENSG00000167747.16	ENST00000596655.1	1639	2	-69	0	-69	0	multi-exon	FALSE	canonical	3	2282	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGCCAAGCAGGGCAAC	-50801967	False	NA	-75	True	NA	NA	NA	50802327	50797760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50799358_50802216
WTC11_00047544	chr19	-	918	2	FSM	ENSG00000129455.15	ENST00000594914.1	423	2	-403	-92	-403	90	multi-exon	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCTCATGGTCACTTT	-50998336	False	NA	91	True	NA	NA	NA	50998370	50995916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50996215_50997750
WTC11_00047550	chr19	-	1182	3	NNC	ENSG00000142544.7	novel	2126	3	NA	NA	23	-918	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	56	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTACCTGGCCTTCCATG	-51107705	True	NA	-34	True	AATAAA	-7	NA	51108386	51098523	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51099140_51104061_51104588_51108346
WTC11_00047553	chr19	-	884	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	-12	0	12	multi-exon	FALSE	canonical	3	729	junction_5	16.1938259839977	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTAGAGACCCATTA	-51356720	True	NA	-8	True	AATAAA	-31	NA	51366388	51345156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
WTC11_00047556	chr19	-	703	2	NIC	ENSG00000160318.6	novel	417	3	NA	NA	-148	-14	intron_retention	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGCTTTTTTTAGCGCTG	NA	False	NA	-17	True	AATAAA	-3	NA	51368125	51367113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_51367577_51367885
WTC11_00047558	chr19	-	2084	4	FSM	ENSG00000105509.11	ENST00000601714.5	2086	4	0	2	0	-2	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCAGCCTCCACCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	51719941	51713113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51714103_51716255_51716389_51716967_51717194_51719205
WTC11_00047559	chr19	-	2874	3	FSM	ENSG00000161551.15	ENST00000638875.1	459	3	-1969	-446	-1969	444	multi-exon	FALSE	canonical	0	0	junction_2	28.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGTGGAAAACTTGCT	-51873802	False	NA	NA	False	NA	NA	NA	51873816	51855357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51855968_51860903_51860979_51871627
WTC11_00047562	chr19	-	8291	6	FSM	ENSG00000161551.15	ENST00000638348.2	8291	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	59.1283350010805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-51887444	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
WTC11_00047563	chr19	-	7797	10	Fusion	ENSG00000198093.11_ENSG00000161551.15	novel	8291	6	NA	NA	0	-4963	intron_retention	FALSE	canonical	3	27	junction_5	99.0544182647992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAGTAAAATTGTGTTA	-51898633	True	NA	NA	False	AATATA	-7	NA	51905011	51872010	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
WTC11_00047565	chr19	-	5765	5	FSM	ENSG00000198093.11_ENSG00000161551.15	ENST00000354957.8	3192	5	6	-2579	0	2579	multi-exon	FALSE	canonical	3	232	junction_1	28.2699044922334	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTATTTCTCTTT	-51898633	True	NA	-2	True	AATAAA	-17	NA	51905011	51886655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
WTC11_00047572	chr19	-	2356	5	FSM	ENSG00000256683.7	ENST00000243644.9	2355	5	18	-19	4	19	multi-exon	FALSE	canonical	3	44	junction_4	7.29297607290741	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAGGAGCTGAGGTCA	-51986290	True	NA	17	True	ATTAAA	-37	NA	51986822	51964320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51966215_51968577_51968674_51969004_51969132_51974345_51974532_51986769
WTC11_00047579	chr19	-	4072	7	FSM	ENSG00000197619.15	ENST00000598071.6	4075	7	0	3	0	-1	multi-exon	FALSE	canonical	3	16	junction_6	8.77021474461525	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTTTGTGTGAGCACA	-52007228	True	NA	-4	True	AATAAA	-23	NA	52008211	51991334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
WTC11_00047583	chr19	-	4851	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	-143	-3677	-101	0	multi-exon	FALSE	canonical	0	0	junction_1	50.4039680977599	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	-52028440	False	NA	-5	True	AATAAA	-17	NA	52028480	52013323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
WTC11_00047584	chr19	-	5282	5	FSM	ENSG00000256087.7	ENST00000221315.10	4637	5	-648	3	-648	-2	multi-exon	FALSE	canonical	3	18	junction_1	2.73861278752583	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATATTGTGCGAACGTTAA	NA	False	NA	-3	True	AATAAA	-24	NA	52049486	52031380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52035441_52040487_52040584_52041479_52041607_52046853_52047061_52048694
WTC11_00047585	chr19	-	596	5	FSM	ENSG00000256087.7	ENST00000598745.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.70502447189084	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCATGATACATTTGA	-52048620	False	NA	NA	False	NA	NA	NA	52048640	52035306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52035441_52040487_52040584_52041479_52041607_52046853_52047061_52048608
WTC11_00047588	chr19	-	5408	5	NNC	ENSG00000204611.7	novel	2563	5	NA	NA	65	979	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	30.8007710942437	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGACGTTCCTTTCAC	-52137442	False	NA	1	True	AATAAA	-20	NA	52139839	52112111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52117025_52123922_52124050_52130500_52130589_52139454_52139627_52139731
WTC11_00047589	chr19	-	5456	5	FSM	ENSG00000204611.7	ENST00000330123.9	2563	5	-215	-2678	-23	979	multi-exon	FALSE	canonical	0	0	junction_1	26.6211851727154	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGACGTTCCTTTCAC	-52137564	True	NA	1	True	AATAAA	-20	NA	52139961	52112111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52117025_52122359_52122458_52123922_52124050_52130500_52130589_52139731
WTC11_00047591	chr19	-	551	4	FSM	ENSG00000204611.7	ENST00000597013.5	577	4	0	26	0	-26	multi-exon	FALSE	canonical	3	13	junction_1	21.9696760710454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGATCTTGAACTCCCG	-52137507	True	NA	NA	False	NA	NA	NA	52139904	52122294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52122458_52123922_52124050_52130500_52130589_52139731
WTC11_00047594	chr19	-	806	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCCTTTCATTTCCC	-52170757	True	NA	-2	True	AATAAA	-17	NA	52171643	52160322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
WTC11_00047595	chr19	-	2732	1	FSM	ENSG00000269834.7	ENST00000594119.1	2732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCTAGTCTTGTGTA	-52391000	False	NA	NA	False	ATTAAA	-16	NA	52391573	52388841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52388800_52391600
WTC11_00047598	chr19	-	895	3	NIC	ENSG00000269834.7	novel	1590	4	NA	NA	69	66	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGCTGGGTGTGGTG	-52397115	True	NA	NA	False	AATAAA	-17	NA	52397688	52395217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52395751_52396364_52396500_52397461
WTC11_00047599	chr19	-	1640	1	Genic_Genomic	ENSG00000268970.1	novel	NA	NA	NA	NA	-739	-288	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGACAGAGCAAGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	52599626	52597986	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_52598000_52599600
WTC11_00047601	chr19	-	2837	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-39	-118	-6	118	multi-exon	FALSE	canonical	3	46	junction_1	18.7082869338697	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGATCATGAAGTCAAG	-52637250	True	NA	93	True	NA	NA	NA	52638394	52612258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
WTC11_00047602	chr19	-	3716	2	FSM	ENSG00000167766.20	ENST00000541777.6	3743	2	27	0	27	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	NA	False	NA	-26	True	AATAAA	-15	NA	52618013	52612377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52614798_52616717
WTC11_00047603	chr19	-	622	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	23	83	0	-83	multi-exon	FALSE	canonical	3	61	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTAAAAATACAAAAAT	-52637221	True	NA	NA	False	NA	NA	NA	52638365	52618582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52619063_52635065_52635154_52638311
WTC11_00047606	chr19	-	7935	6	FSM	ENSG00000213020.10_ENSG00000288953.1	ENST00000652185.1	4507	6	29	-3457	0	-3	multi-exon	FALSE	canonical	3	8	junction_5	4.31740662898458	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTTTGGTGGCCTC	-52734045	True	NA	-4	True	AATAAA	-19	NA	52735015	52699355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
WTC11_00047609	chr19	-	3641	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	4	0	4	0	multi-exon	FALSE	canonical	3	36	junction_3	8.83176086632785	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	-52785863	True	NA	NA	False	NA	NA	NA	52786803	52764549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
WTC11_00047610	chr19	-	600	2	FSM	ENSG00000189190.11	ENST00000599893.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCAAGGGATTCTCCTT	-52785851	True	NA	NA	False	NA	NA	NA	52786791	52780652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52781056_52786594
WTC11_00047612	chr19	-	1819	3	FSM	ENSG00000198538.11	ENST00000391783.6	1827	3	8	0	8	0	multi-exon	FALSE	canonical	3	20	junction_1	43.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACTGGAGAGAAACC	NA	False	NA	NA	False	NA	NA	NA	52821661	52800047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52801703_52817943_52818032_52821585
WTC11_00047613	chr19	-	732	4	ISM	ENSG00000198538.11	ENST00000594602.5	684	5	39572	-80	0	9	3prime_fragment	FALSE	canonical	3	72	junction_2	31.1555238547945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCCCAAAACCCATATT	-52817975	False	NA	NA	False	NA	NA	NA	52818028	52801300	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943
WTC11_00047614	chr19	-	684	5	FSM	ENSG00000198538.11	ENST00000594602.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	37.7582772382427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAGGGAAAATTGGTA	-52855922	True	NA	NA	False	NA	NA	NA	52857600	52801380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943_52818032_52857571
WTC11_00047617	chr19	-	297	3	NIC	ENSG00000198538.11	novel	228	2	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGTGTATATTTGTTT	-52821580	True	NA	0	True	ATTAAA	-26	NA	52821633	52814265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52814427_52817943_52818032_52821585
WTC11_00047619	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	30.7113578338699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52855971	True	NA	-5	True	AATAAA	-18	NA	52857649	52838535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
WTC11_00047620	chr19	-	4503	8	Fusion	ENSG00000204604.13_ENSG00000182986.15	novel	6448	8	NA	NA	781	0	multi-exon	TRUE	canonical	0	0	junction_1	20.060113740089	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52891575	False	NA	-5	True	AATAAA	-18	NA	52894375	52838535	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_52841304_52881045_52881984_52883639_52883705_52888126_52888254_52890240_52890329_52891228_52891347_52893778_52893928_52894125
WTC11_00047623	chr19	-	6339	6	FSM	ENSG00000182986.15	ENST00000682928.1	6331	6	0	-8	0	0	multi-exon	FALSE	canonical	2	18	junction_4	16.6084315936214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTTCTTTCTTTATG	-52894835	True	NA	-4	True	ATTAAA	-23	NA	52897635	52876171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52893778_52893857_52897519
WTC11_00047624	chr19	-	6123	6	Fusion	ENSG00000213793.6_ENSG00000182986.15	novel	4144	5	NA	NA	-78	0	multi-exon	FALSE	non_canonical	0	0	junction_2	14.7837748900611	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTTCTTTCTTTATG	NA	False	NA	-4	True	ATTAAA	-23	NA	52923548	52876171	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_52876762_52876878_52878267_52904414_52908180_52915195_52915323_52917858_52917932_52923368
WTC11_00047625	chr19	-	598	5	FSM	ENSG00000182986.15	ENST00000593618.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	20.5472017559569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGATATGATCAAAGGCAT	-52894884	True	NA	NA	False	AATAAA	-21	NA	52897684	52881755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52897647
WTC11_00047627	chr19	-	453	3	NIC	ENSG00000182986.15	novel	552	5	NA	NA	20	207	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	21	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-52894815	True	NA	NA	False	AATGAA	-19	NA	52897615	52887984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52888254_52890240_52890329_52897519
WTC11_00047629	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-52942227	True	NA	NA	False	NA	NA	NA	52942601	52927134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52929415_52942540
WTC11_00047630	chr19	-	4507	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	20	-1967	0	1961	multi-exon	FALSE	canonical	3	38	junction_3	11.323525167642	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTATGTCTGTCTGAGC	-52962089	True	NA	NA	False	TATAAA	-19	NA	52962861	52947417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
WTC11_00047631	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	17.5941909605289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	-52962139	True	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
WTC11_00047632	chr19	-	491	4	FSM	ENSG00000180257.14	ENST00000438970.6	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTATGTTCAGTAG	-52962099	True	NA	NA	False	NA	NA	NA	52962871	52951750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52951892_52952750_52952878_52956026_52956105_52962726
WTC11_00047634	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.68331255192114	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	-52993184	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
WTC11_00047635	chr19	-	4991	5	FSM	ENSG00000242779.7	ENST00000599665.5	599	5	-56	-4336	-51	470	multi-exon	FALSE	canonical	2	4	junction_4	8.68907359849138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTCAAATGATGTAAT	-52993242	True	NA	-17	True	AATAAA	-24	NA	52993582	52966425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52990092_52990211_52993479
WTC11_00047638	chr19	-	6068	8	NIC	ENSG00000170949.18	novel	4336	7	NA	NA	0	1724	combination_of_known_splicesites	FALSE	canonical	3	71	junction_6	44.0611819530757	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTCTATTTCCTTA	-53101441	True	NA	0	True	AATAAA	-19	NA	53103378	53064881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53086261_53086322_53091412_53091530_53091636_53091721_53103264
WTC11_00047640	chr19	-	4431	6	FSM	ENSG00000170949.18	ENST00000683776.1	4431	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	57.4337879649253	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-53101485	True	NA	NA	False	AATAAA	-20	NA	53103422	53066613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091721_53103264
WTC11_00047641	chr19	-	668	4	FSM	ENSG00000170949.18	ENST00000601982.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	18.8384948679264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTTATGGCCCAGAAAG	-53085372	False	NA	-16	True	NA	NA	NA	53085384	53070072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162
WTC11_00047646	chr19	-	2331	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	35	-78	0	78	multi-exon	FALSE	canonical	3	30	junction_3	7.78888096369861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGACTTTCAACCAAAAC	-53131807	True	NA	77	True	NA	NA	NA	53132875	53107800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
WTC11_00047647	chr19	-	2403	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.3571255285137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131850	True	NA	-1	True	ATTAAA	-23	NA	53132918	53107878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
WTC11_00047649	chr19	-	7984	5	FSM	ENSG00000197937.13	ENST00000334197.12	7984	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	6.64736790015417	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCTATATTTTATAGA	-53158484	True	NA	-22	True	ATTAAA	-21	NA	53159053	53134934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53142557_53148680_53148810_53149240_53149368_53153732_53153794_53159008
WTC11_00047652	chr19	-	4161	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	-3	0	3	multi-exon	FALSE	canonical	3	6	junction_1	3.2659863237109	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATCATTTCTTGCC	-53193025	True	NA	NA	False	AATAAA	-22	NA	53193358	53162420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
WTC11_00047653	chr19	-	510	3	FSM	ENSG00000197497.11	ENST00000597544.5	552	3	42	0	14	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGTATGCCGTCCTCC	-53193011	True	NA	NA	False	NA	NA	NA	53193344	53179567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53179985_53182883_53182944_53193311
WTC11_00047654	chr19	-	758	1	FSM	ENSG00000267809.1	ENST00000596415.1	907	1	208	-59	208	59	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAACAAAACAAAACAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	53224671	53223913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53223900_53224700
WTC11_00047659	chr19	-	4279	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	-15	-3329	0	2	multi-exon	FALSE	canonical	3	34	junction_1	123.057913195373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGAAAGCCTGTGGTT	-53251856	True	NA	-7	True	AATAAA	-22	NA	53254846	53238594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
WTC11_00047660	chr19	-	5544	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	-80	-4745	-28	9	multi-exon	FALSE	canonical	3	137	junction_3	77.1275999021535	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTGGTTTTTTTAA	-53251936	True	NA	0	True	AATAAA	-29	NA	53254926	53238587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
WTC11_00047663	chr19	-	5692	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	-25	-4961	0	2	multi-exon	FALSE	canonical	3	79	junction_3	104.455200391789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGAAAGCCTGTGGTT	-53251856	True	NA	-7	True	AATAAA	-22	NA	53254846	53238594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
WTC11_00047665	chr19	-	3466	9	FSM	ENSG00000142405.22	ENST00000391775.7	3465	9	0	-1	0	0	multi-exon	TRUE	canonical	2	3	junction_2	6.7349368965121	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGCGGGCACCTGTAGT	-53824263	False	55	-11	True	AATAAA	-18	NA	53824317	53793740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53794137_53795858_53796030_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807666_53809586_53811289_53814907_53814989_53823885
WTC11_00047667	chr19	-	2295	9	NNC	ENSG00000125505.17	novel	2294	8	NA	NA	0	75828	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	234.228220705789	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTGTGGTGGCACAAG	NA	False	NA	NA	False	AAAAAG	-1	NA	54189549	54097583	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_54097613_54173411_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
WTC11_00047669	chr19	-	1381	4	FSM	ENSG00000105617.4	ENST00000222224.4	1381	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	16.0831174424198	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTTCTTCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	54159721	54155160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54155941_54156762_54157026_54158281_54158462_54159563
WTC11_00047670	chr19	-	489	2	FSM	ENSG00000167608.12	ENST00000611183.4	450	2	-26	-13	-26	13	multi-exon	FALSE	canonical	3	28	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCCTGAAGGTGGGG	NA	False	NA	3	True	AATAAA	-32	NA	54160675	54160094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54160375_54160466
WTC11_00047673	chr19	-	647	5	FSM	ENSG00000167608.12	ENST00000476013.2	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.26135582092915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTTGGTTGGTGCGGGT	NA	False	NA	NA	False	NA	NA	NA	54171949	54164538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54164602_54168170_54168293_54168447_54168681_54169511_54169661_54171869
WTC11_00047674	chr19	-	3045	2	FSM	ENSG00000125505.17	ENST00000494142.1	3039	2	0	-6	0	0	multi-exon	FALSE	canonical	3	586	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGTCCGTGCAGGTATC	-54180019	False	NA	-6	True	AATAAA	-16	NA	54180790	54173412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54174432_54178764
WTC11_00047677	chr19	-	2463	7	FSM	ENSG00000125505.17	ENST00000431666.6	2471	7	6	2	6	0	multi-exon	FALSE	canonical	3	13	junction_4	255.121975184856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	NA	False	NA	-8	True	AATAAA	-14	NA	54189876	54173414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54188432_54188512_54189337
WTC11_00047678	chr19	-	3347	2	FSM	ENSG00000125505.17	ENST00000495279.2	1585	2	0	-1762	0	436	multi-exon	FALSE	canonical	3	718	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTAGAACTCATAGCC	-54182863	False	NA	NA	False	NA	NA	NA	54183634	54177900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54181134_54183520
WTC11_00047679	chr19	-	2074	7	FSM	ENSG00000125505.17	ENST00000391754.5	1797	7	123	-400	0	400	multi-exon	FALSE	canonical	3	501	junction_1	87.7618304782261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54189549	54177936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
WTC11_00047681	chr19	-	1204	1	FSM	ENSG00000267838.2	ENST00000599382.2	880	1	-468	144	-468	-144	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGAGCTGGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	54440012	54438808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54438800_54440000
WTC11_00047686	chr19	-	3423	11	FSM	ENSG00000167634.12	ENST00000592784.5	3269	11	-18	-136	-10	-2	multi-exon	FALSE	canonical	3	16	junction_2	7.82879301041993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGCAGCTGCGTTTATT	-54947271	True	NA	-8	True	AATAAA	-13	NA	54947515	54923516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54923873_54927604_54927776_54930498_54930667_54933568_54933740_54934488_54934660_54936260_54936432_54938043_54938242_54938887_54940467_54940930_54941006_54941434_54941751_54947468
WTC11_00047688	chr19	-	1939	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	-8	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.1043804953157	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGTCGTAGATTTTATT	NA	False	NA	31	True	AAAAAG	-12	NA	55063217	55044315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
WTC11_00047693	chr19	-	2993	22	FSM	ENSG00000125503.13	ENST00000592993.1	2269	22	-221	-503	3	1	multi-exon	FALSE	canonical	3	47	junction_13	40.664213152261	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTTCCCAGCCAGA	-55116768	True	NA	-1	True	AATAAA	-22	NA	55117634	55090912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092866_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095601_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
WTC11_00047694	chr19	-	3062	21	NIC	ENSG00000125503.13	novel	2997	22	NA	NA	13	1	intron_retention	TRUE	canonical	3	59	junction_12	40.7229664931228	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTTCCCAGCCAGA	-55116758	True	NA	-1	True	AATAAA	-22	NA	55117624	55090912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092866_55093015_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
WTC11_00047695	chr19	-	3002	22	FSM	ENSG00000125503.13	ENST00000263433.8	2997	22	0	-5	0	1	multi-exon	FALSE	canonical	3	42	junction_7	42.3120895864299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTTCCCAGCCAGA	-55116771	True	NA	-1	True	AATAAA	-22	NA	55117637	55090912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
WTC11_00047697	chr19	-	827	5	FSM	ENSG00000125503.13	ENST00000592754.5	827	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	38.0952752976009	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTGGGGCCGAGCTG	-55095141	False	NA	NA	False	NA	NA	NA	55095161	55092775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660
WTC11_00047698	chr19	-	419	4	FSM	ENSG00000125503.13	ENST00000588277.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	23.5372045918796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGAGGTGAGGGGCTCAG	-55094674	False	NA	NA	False	NA	NA	NA	55094694	55092789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55092866_55093015_55093234_55094344_55094436_55094660
WTC11_00047699	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	364.501143116635	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
WTC11_00047700	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	360.172509620585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
WTC11_00047701	chr19	-	1048	10	NIC	ENSG00000105048.18	novel	995	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_9	200.408163752791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCTCTGATGTTAT	-55143755	True	NA	-36	True	AATAAA	-19	NA	55146937	55132827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146659
WTC11_00047702	chr19	-	1178	10	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	303.409066654896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTCTGATGTTATTA	-55143767	True	NA	-34	True	AATAAA	-21	NA	55146949	55132825	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146680
WTC11_00047703	chr19	-	1074	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	-9	0	0	multi-exon	FALSE	canonical	3	166	junction_10	270.201942998195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTCTGATGTTATTA	-55143767	True	NA	-34	True	AATAAA	-21	NA	55146949	55132825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
WTC11_00047705	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	239.366808759699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	-55143760	True	NA	-73	True	NA	NA	NA	55146942	55132864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
WTC11_00047711	chr19	-	731	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	-58	-4	9	0	multi-exon	FALSE	canonical	3	259	junction_4	115.275756341045	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-55155211	True	NA	-3	True	AATAAA	-20	NA	55156783	55151766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
WTC11_00047712	chr19	-	1336	6	ISM	ENSG00000167646.14	ENST00000533527.6	1787	7	671	4	671	-2	3prime_fragment	FALSE	canonical	3	13	junction_4	12.0099958368019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTGTGTGTCCAAGCG	-55161134	False	NA	-6	True	AGTAAA	-15	NA	55161396	55158666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292
WTC11_00047713	chr19	-	756	6	ISM	ENSG00000167646.14	ENST00000391720.8	2169	12	52	2979	14	-308	5prime_fragment	FALSE	canonical	3	12	junction_3	2.92574776766556	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGGCCCAGGAGAGGGG	-55166337	True	NA	NA	False	NA	NA	NA	55166599	55161641	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
WTC11_00047714	chr19	-	506	2	FSM	ENSG00000167646.14	ENST00000586877.1	547	2	41	0	14	0	multi-exon	FALSE	canonical	3	9	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGACTCCCAGGCCGAT	-55166337	True	NA	NA	False	NA	NA	NA	55166599	55165988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55166418_55166522
WTC11_00047715	chr19	-	4015	25	NNC	ENSG00000105063.19	novel	3984	24	NA	NA	0	51025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.174333320764	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAACCGGATCAAGGGGT	-55248043	True	NA	NA	False	NA	NA	NA	55259017	55178753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_55178785_55229778_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
WTC11_00047717	chr19	-	6497	25	Fusion	ENSG00000180089.6_ENSG00000105063.19	novel	3984	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_1	124.245661393064	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGAGGACTGTTTGGT	-55248043	True	NA	-4	True	GATAAA	-21	NA	55259017	55226638	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_55227564_55228190_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
WTC11_00047719	chr19	-	3984	24	FSM	ENSG00000105063.19	ENST00000412770.7	3984	24	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_23	66.8949462771973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	-55248043	True	NA	-18	True	AATAAA	-17	NA	55259017	55229778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
WTC11_00047722	chr19	-	1637	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	-2	0	2	multi-exon	TRUE	canonical	3	512	junction_7	79.0207929236711	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATTGTGTCATTTACT	-55275505	True	NA	-1	True	AATAAA	-24	NA	55280110	55262220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
WTC11_00047723	chr19	-	1778	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	-10	0	2	multi-exon	FALSE	canonical	3	23	junction_8	224.508038553189	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATTGTGTCATTTACT	-55280348	False	NA	-1	True	AATAAA	-24	NA	55280360	55262220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
WTC11_00047725	chr19	-	882	4	FSM	ENSG00000133265.11	ENST00000593263.5	884	4	0	2	0	-2	multi-exon	FALSE	canonical	3	49	junction_3	278.734042891547	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCGGGTGGGGCT	-55275472	True	NA	NA	False	NA	NA	NA	55280077	55274397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55274623_55277641_55277847_55279398_55279703_55279929
WTC11_00047731	chr19	-	743	5	FSM	ENSG00000108106.14	ENST00000587845.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	5624.49155479853	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCTCCACCGACCCT	-55407702	False	NA	NA	False	NA	NA	NA	55407719	55401578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55401763_55404060_55404148_55404287_55404479_55406814_55406963_55407586
WTC11_00047733	chr19	-	1573	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	-7	0	7	multi-exon	FALSE	canonical	3	135	junction_3	86.1259978171516	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTGGGTTGGGGGGG	-55462324	False	NA	-2	True	AATAAA	-24	NA	55462343	55452977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
WTC11_00047734	chr19	-	1082	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	-7	0	7	multi-exon	FALSE	canonical	3	133	junction_3	88.9390802740842	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTGGGTTGGGGGGG	-55455267	True	NA	-2	True	AATAAA	-24	NA	55461642	55452977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
WTC11_00047736	chr19	-	1352	2	FSM	ENSG00000283567.2	ENST00000635964.2	1337	2	0	-15	0	15	multi-exon	FALSE	canonical	3	17	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATTTCCAATTCAGAT	-55464495	True	NA	2	True	AATAAA	-32	NA	55464751	55462985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55463968_55464381
WTC11_00047743	chr19	-	1946	3	FSM	ENSG00000142409.6	ENST00000610935.2	1940	3	0	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_2	0.5	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTTCTTGAGTCCGG	-56115629	True	NA	4	True	AATAAA	-25	NA	56121295	56087359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56089093_56103138_56103228_56121171
WTC11_00047744	chr19	-	3641	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	9.86711710683521	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTACTTTTGTAAGACT	-56314086	True	NA	NA	False	NA	NA	NA	56314839	56219687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
WTC11_00047745	chr19	-	1775	5	FSM	ENSG00000131848.10	ENST00000592355.5	1813	5	47	-9	26	0	multi-exon	FALSE	canonical	0	0	junction_4	10.0623058987491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	NA	False	NA	-6	True	AATAAA	-30	NA	56228264	56221302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56222324_56222590_56222742_56223630_56223835_56224662_56225049_56228251
WTC11_00047746	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.0518654985033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	-56314086	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
WTC11_00047752	chr19	-	625	5	FSM	ENSG00000018869.18	ENST00000589143.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	16.976086121365	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	-56393031	True	NA	-4	True	AATAAA	-15	NA	56393478	56375845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393441
WTC11_00047753	chr19	-	3089	5	FSM	ENSG00000018869.18	ENST00000586929.6	3061	5	-28	0	-24	0	multi-exon	FALSE	canonical	3	27	junction_4	6.86931583201704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGGATATTTTGT	-56393115	True	NA	0	True	AATAAA	-18	NA	56393562	56382750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
WTC11_00047754	chr19	-	2825	5	FSM	ENSG00000018869.18	ENST00000301310.8	2824	5	0	-1	0	0	multi-exon	FALSE	canonical	3	7	junction_4	15.1554445662277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGGATATTTTGT	-56393073	True	NA	0	True	AATAAA	-18	NA	56393520	56382750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
WTC11_00047756	chr19	-	3893	5	NNC	ENSG00000198046.13	novel	3832	5	NA	NA	72	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	17.9025137899682	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTGGATCATACAC	-56477938	False	NA	-20	True	AATAAA	-14	NA	56477993	56439340	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56477813
WTC11_00047766	chr19	-	2545	4	FSM	ENSG00000083817.9	ENST00000196489.4	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.3558353285671	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTTAGGGTTTGG	-57577743	True	NA	-8	True	AATAAA	-20	NA	57578911	57571565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57573702_57575803_57575931_57578056_57578099_57578671
WTC11_00047767	chr19	-	3730	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	26	-1189	0	97	multi-exon	FALSE	canonical	3	40	junction_1	14.7478812037526	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCCAACAACCCCTGTC	-57707300	True	NA	NA	False	NA	NA	NA	57709168	57696177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
WTC11_00047769	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	13.2748718344933	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707300	True	NA	0	True	NA	NA	NA	57709168	57697366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
WTC11_00047770	chr19	-	2434	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	-3	0	3	multi-exon	FALSE	canonical	3	33	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGGGTTCTGTTTAT	-57726638	True	NA	1	True	AATAAA	-25	NA	57727624	57719747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
WTC11_00047773	chr19	-	2357	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	-5	0	5	multi-exon	FALSE	canonical	3	24	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCTCTCCTGCATCATG	-57813196	True	NA	1	True	AATAAA	-22	NA	57814913	57807076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57809104_57813293_57813421_57814710
WTC11_00047776	chr19	-	533	2	NIC	ENSG00000204514.11	novel	528	3	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884233	True	NA	-2	True	AATAAA	-22	NA	57889052	57850314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_57850562_57888766
WTC11_00047780	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	72.6476943887416	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-57884218	True	NA	-1	True	AATAAA	-31	NA	57889037	57864757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
WTC11_00047781	chr19	-	6244	3	FSM	ENSG00000204514.11	ENST00000435989.7	6244	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	67.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCTCGTA	-57884218	True	NA	-4	True	AATAAA	-17	NA	57889037	57869380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57875227_57876915_57877043_57888766
WTC11_00047789	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-57944598	True	NA	-15	True	AATAAA	-21	NA	57947706	57940832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57942648_57943933_57944061_57947441
WTC11_00047790	chr19	-	2083	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	-31	-94	0	3	multi-exon	FALSE	canonical	3	37	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATATTTAGTATATG	-57944598	True	NA	-12	True	AATAAA	-24	NA	57947706	57940829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57942648_57947441
WTC11_00047792	chr19	-	4231	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	-6	0	6	multi-exon	FALSE	canonical	3	17	junction_6	26.0496321151246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTTTCTCTGTCTCG	NA	False	NA	-17	True	AATAAA	-31	NA	58003349	57977069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
WTC11_00047793	chr19	-	2495	6	NIC	ENSG00000166704.13	novel	4080	7	NA	NA	50	-1372	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	30.7141661127239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAGAATTCTTCCCT	-58001896	True	NA	-9	True	AAAAAG	-3	NA	58002696	57978447	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_57980280_57988206_57988303_57988594_57988722_58000682_58000740_58001288_58001371_58002395
WTC11_00047796	chr19	-	2624	7	FSM	ENSG00000121413.13	ENST00000601144.6	2539	7	21	-106	0	88	multi-exon	FALSE	canonical	3	73	junction_6	23.5772960470214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACTGCTCCCTGTAGA	-58095451	True	NA	68	True	CATAAA	-23	NA	58098210	58083749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098173
WTC11_00047797	chr19	-	2704	7	NIC	ENSG00000121413.13	novel	2539	7	NA	NA	0	88	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	30.9515750810843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACTGCTCCCTGTAGA	-58095472	True	NA	68	True	CATAAA	-23	NA	58098231	58083749	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098114
WTC11_00047800	chr19	-	5734	2	FSM	ENSG00000121413.13	ENST00000598497.1	5729	2	0	-5	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTTTCATTGATTGC	-58087839	False	NA	-20	True	ACTAAA	-19	NA	58090598	58083837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58088838_58089864
WTC11_00047801	chr19	-	2780	7	FSM	ENSG00000121413.13	ENST00000240727.10	2779	7	0	-1	0	0	multi-exon	TRUE	canonical	3	14	junction_6	44.0167266186642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTTTCATTGATTGC	-58095451	True	NA	-20	True	ACTAAA	-19	NA	58098210	58083837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58097929
WTC11_00047807	chr19	-	3607	3	NIC	ENSG00000181894.15	novel	3091	5	NA	NA	15	2	intron_retention	FALSE	canonical	3	5	junction_2	4	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATCATATTTTTTTC	-58154260	True	NA	-4	True	AATAAA	-26	NA	58155052	58126327	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58129512_58142556_58142662_58154734
WTC11_00047808	chr19	-	2683	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	43	0	25	0	multi-exon	FALSE	canonical	3	41	junction_1	0	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-58278757	False	NA	-4	True	AATACA	-23	NA	58278783	58257269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58259692_58278522
WTC11_00047812	chr19	-	1954	3	FSM	ENSG00000152475.7	ENST00000597582.2	1939	3	0	-15	0	10	multi-exon	FALSE	canonical	3	12	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCTAACTCGAGTTTT	-58380736	True	NA	3	True	ATTAAA	-30	NA	58381030	58367607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58369362_58369818_58369929_58380940
WTC11_00047817	chr19	-	479	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	-5	0	1	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATGTCTGCGTGGATG	-58497425	True	NA	-2	True	AATAAA	-21	NA	58499241	58498331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58498692_58499122
WTC11_00047819	chr19	-	2354	3	FSM	ENSG00000119574.13	ENST00000354590.7	2352	3	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_2	65	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCACCTGGATCAGTG	-58519542	False	NA	-4	True	AATAAA	-34	NA	58519554	58513527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58514311_58516394_58517674_58519262
WTC11_00047821	chr19	-	2159	3	FSM	ENSG00000119574.13	ENST00000600990.1	2159	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	61.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGACTGTAGGCCATG	-58519739	False	NA	-42	True	GGGGCT	-23	NA	58519751	58513565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58514311_58516394_58517674_58519616
WTC11_00047822	chr19	-	775	4	ISM	ENSG00000130724.10	ENST00000600006.6	1014	5	999	-9	541	9	3prime_fragment	FALSE	canonical	3	959	junction_3	64.240866190369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTGACTTTTGGCCTG	-58554078	False	12375	-2	True	AATAAA	-25	NA	58554097	58551556	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_58551968_58552054_58552186_58552258_58552439_58554044
WTC11_00047823	chr19	-	1187	5	FSM	ENSG00000130724.10	ENST00000688139.1	1178	5	0	-9	0	9	multi-exon	FALSE	canonical	3	959	junction_4	55.8899588477215	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTGACTTTTGGCCTG	-58554619	False	NA	-2	True	AATAAA	-25	NA	58554638	58551556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044
WTC11_00047824	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	-9	0	9	multi-exon	FALSE	canonical	3	371	junction_5	258.970577479373	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTGACTTTTGGCCTG	-58542598	True	NA	-2	True	AATAAA	-25	NA	58554973	58551556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
WTC11_00047825	chr19	-	901	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	-7	0	7	multi-exon	FALSE	canonical	3	392	junction_5	250.73380306612	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTGACTTTTGGCC	-58542730	True	NA	-4	True	AATAAA	-23	NA	58555105	58551558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
WTC11_00047829	chr19	-	1160	6	FSM	ENSG00000130725.8	ENST00000253023.8	1159	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1868	junction_1	103.157355530277	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGCTTCTTACTTCT	-58548531	True	NA	-4	True	ATTAAA	-18	NA	58558611	58555710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
WTC11_00047833	chr19	-	335	3	FSM	ENSG00000130725.8	ENST00000593801.1	323	3	0	-12	0	0	multi-exon	FALSE	canonical	3	1984	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTTTCTTGATTTC	-58557130	False	NA	NA	False	NA	NA	NA	58557149	58556581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58556791_58556891_58556931_58557062
WTC11_00047836	chr19	-	3213	2	FSM	ENSG00000099326.9	ENST00000595245.1	3261	2	0	48	0	-48	multi-exon	FALSE	canonical	3	35	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGTGGTGCCATCA	-58571449	False	NA	NA	False	NA	NA	NA	58571545	58568214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58569398_58569515
WTC11_00047838	chr19	+	286	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAATTATTTGT	NA	False	NA	NA	False	NA	NA	NA	770557	770843	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_770600_770800
WTC11_00047839	chr19	+	249	1	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTAGACCATCACGGACG	NA	False	NA	NA	False	NA	NA	NA	5550724	5550973	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_5550700_5551000
WTC11_00047840	chr19	+	393	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTTTGTTGATTGTA	12196673	False	NA	NA	False	NA	NA	NA	12197484	12197877	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_12197500_12197900
WTC11_00047841	chr19	+	443	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACGAGGCAAAAT	NA	False	NA	NA	False	AAAAAG	-12	NA	15262111	15262554	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_15262100_15262600
WTC11_00047842	chr19	+	328	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCCAGAGCATGGGAAA	19821950	False	NA	NA	False	NA	NA	NA	19821983	19822311	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_19822000_19822300
WTC11_00047843	chr19	+	381	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCGTAAAATAGGCAAATG	NA	False	NA	NA	False	NA	NA	NA	20155662	20156043	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20155700_20156000
WTC11_00047844	chr19	+	310	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTCATAAAAACCCACAT	NA	False	NA	NA	False	NA	NA	NA	20158663	20158973	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20158700_20159000
WTC11_00047845	chr19	+	785	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCGCTTGAAGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	20159918	20160703	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20159900_20160700
WTC11_00047846	chr19	+	526	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATCATGTCTGACCTCT	22571158	False	NA	NA	False	CATAAA	-19	NA	22571185	22571711	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22571200_22571700
WTC11_00047847	chr19	+	1455	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAATATAGTGAAGACA	NA	False	NA	NA	False	TATAAA	-18	NA	23148650	23150105	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23148600_23150100
WTC11_00047848	chr19	+	961	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGTAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	23409267	23410228	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23409300_23410200
WTC11_00047849	chr19	+	289	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	28856435	28856724	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_28856400_28856700
WTC11_00047851	chr19	+	273	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTCCACTGTTCT	NA	False	NA	NA	False	AAAAAG	-10	NA	33184545	33184818	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_33184500_33184800
WTC11_00047853	chr19	+	286	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	42490020	42490306	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_42490000_42490300
WTC11_00047855	chr19	+	3446	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGACCAGACAAATTT	NA	False	NA	NA	False	NA	NA	NA	43969334	43972780	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_43969300_43972800
WTC11_00047859	chr19	+	304	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACGAAGAAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	48468380	48468684	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_48468400_48468700
WTC11_00047860	chr19	+	288	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGGCATTCCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	52629714	52630002	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_52629700_52630000
WTC11_00047867	chr19	+	1575	5	FSM	ENSG00000099866.16	ENST00000215637.8	1541	5	-35	1	-3	0	multi-exon	FALSE	canonical	1	1	junction_1	3.26917420765551	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTCAGTTTTCTC	496392	False	NA	12	True	AATAAA	-15	NA	496450	505342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_496552_497832_498118_498495_498826_501668_501930_504744
WTC11_00047868	chr19	+	1572	7	NIC	ENSG00000172270.22	novel	1598	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	2825.38737265451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTCCTGGCTCCTGTC	448985	True	NA	24	True	AATAAA	-23	NA	572595	583492	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582513_582583_582749
WTC11_00047869	chr19	+	1970	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	-24	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3277.54205731978	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448961	True	NA	25	True	AATAAA	-24	NA	572571	583493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
WTC11_00047870	chr19	+	3408	8	FSM	ENSG00000099822.3	ENST00000251287.3	3420	8	12	0	12	0	multi-exon	TRUE	canonical	0	0	junction_1	0.494871659305393	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCGCGTGTGATTGC	589853	False	NA	7	True	AATAAA	-19	NA	589892	617159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_590578_603543_603968_605060_605223_607963_608183_610258_610406_613247_613489_613851_614017_615794
WTC11_00047872	chr19	+	748	3	FSM	ENSG00000070404.10	ENST00000605925.3	748	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	680510	True	NA	NA	False	NA	NA	NA	680750	682107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_680813_681332_681561_681649
WTC11_00047873	chr19	+	2964	9	FSM	ENSG00000099864.18	ENST00000338448.10	2891	9	-76	3	-76	0	multi-exon	FALSE	canonical	1	2	junction_7	5.63471383479232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCCTGGAGTTCTTGC	708819	False	NA	18	True	AATAAA	-15	NA	708858	748326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_740351_740484_746284
WTC11_00047874	chr19	+	3105	14	NIC	ENSG00000011304.22	novel	3206	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	485.686581677219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCTAGCCCTGTGT	751777	True	NA	27	True	ATTAAA	-18	NA	797428	812222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_808359_808453_808545_808763_810542_810621_810693
WTC11_00047875	chr19	+	3084	13	NIC	ENSG00000011304.22	novel	3155	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	556.172553909506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751810	True	NA	27	True	AATAAA	-15	NA	797461	812312	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_808359_808453_808545_808763_810542_810621_810693
WTC11_00047876	chr19	+	887	4	ISM	ENSG00000197766.8	ENST00000327726.11	1191	5	988	188	988	-188	3prime_fragment	FALSE	canonical	3	18	junction_2	1.24721912892465	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCGGGCATGGAGGTGGG	NA	False	NA	4	True	AATAAA	-20	NA	860651	863453	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_860774_860860_861006_861698_861957_863091
WTC11_00047877	chr19	+	678	5	FSM	ENSG00000065268.11	ENST00000590354.3	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	645.06835878068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	991114	False	NA	19	True	NA	NA	NA	991133	994557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_991146_991226_991352_991994_992122_994019_994089_994212
WTC11_00047878	chr19	+	541	2	FSM	ENSG00000116032.5	ENST00000588335.1	528	2	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTACGAGTGGCGTAGCC	1004458	False	NA	NA	False	NA	NA	NA	1004521	1005279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1004585_1004801
WTC11_00047880	chr19	+	998	5	ISM	ENSG00000064687.13	ENST00000525073.6	1918	14	6488	-3	-630	0	3prime_fragment	FALSE	canonical	3	55	junction_1	47.273142480694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1063388	True	NA	20	True	AATAAA	-33	NA	1063421	1065572	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
WTC11_00047881	chr19	+	1168	4	FSM	ENSG00000099624.8	ENST00000590265.5	1144	4	-24	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	346.058119717226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222552	True	NA	28	True	ATTAAA	-16	NA	1241745	1244825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1242610_1244096_1244186_1244314_1244441_1244736
WTC11_00047883	chr19	+	3760	8	NNC	ENSG00000167470.14	novel	3892	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	30.364452901378	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGACTCCCGCCTGCTCG	1245950	True	NA	10	True	AATAAA	-17	NA	1248582	1259143	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254904_1255062_1255421_1255695_1256994
WTC11_00047884	chr19	+	791	2	FSM	ENSG00000099622.14	ENST00000592467.1	796	2	0	5	0	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCCTGACCCTCCA	1260872	True	NA	NA	False	NA	NA	NA	1261165	1264567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1261642_1264252
WTC11_00047885	chr19	+	1321	7	NNC	ENSG00000099622.14	novel	1328	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	71	junction_4	340.050690665704	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1262484	True	NA	NA	False	ATTAAA	-18	NA	1269340	1273172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271553_1271633_1271980_1272052_1272426
WTC11_00047886	chr19	+	2614	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_1	91.310640870025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	1351167	True	NA	17	True	NA	NA	NA	1354949	1376917	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00047887	chr19	+	2347	12	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	1	-73	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	124.779872290869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGCATTTTTTACAAG	1352541	False	NA	42	True	NA	NA	NA	1356323	1376792	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00047889	chr19	+	3109	8	FSM	ENSG00000115286.21	ENST00000546283.5	1060	8	-10	-2039	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	608.792682784743	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	NA	False	NA	25	True	AATAAA	-21	NA	1383516	1395584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383609_1383707_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
WTC11_00047891	chr19	+	2149	12	NIC	ENSG00000071626.17	novel	2157	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	303	junction_4	366.861245641617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTTTGTGTCCGTTTT	1396334	True	NA	31	True	AATAAA	-22	NA	1407612	1435682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434739
WTC11_00047894	chr19	+	3596	1	FSM	ENSG00000071626.17	ENST00000589874.2	3642	1	46	0	46	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1432069	False	NA	33	True	AATAAA	-24	NA	1432088	1435684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1432100_1435700
WTC11_00047895	chr19	+	493	4	FSM	ENSG00000115268.10	ENST00000589656.6	473	4	-20	0	0	0	multi-exon	FALSE	canonical	3	570	junction_3	8376.53178031736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTCCTTTGCGCAGC	1307585	True	NA	23	True	AATAAA	-11	NA	1438384	1440488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440018_1440242_1440348
WTC11_00047896	chr19	+	513	4	NNC	ENSG00000115268.10	novel	562	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	8628.84219090577	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307585	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1438429_1438806_1438893_1440018_1440256_1440348
WTC11_00047897	chr19	+	562	4	FSM	ENSG00000115268.10	ENST00000586686.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	8199.41259413678	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307585	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439967_1440254_1440348
WTC11_00047899	chr19	+	1916	4	FSM	ENSG00000227500.10	ENST00000590266.5	570	4	-1346	0	-1346	0	multi-exon	FALSE	canonical	1	1	junction_1	125.30762147611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGGTGGATCGG	1908261	False	NA	NA	False	NA	NA	NA	1911743	1918161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1913448_1914978_1915027_1917693_1917823_1918126
WTC11_00047903	chr19	+	5743	29	NIC	ENSG00000104885.19	novel	5469	28	NA	NA	-3	-674	combination_of_known_junctions	TRUE	canonical	2	13	junction_1	20.2528657584198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGACTTATTTTATT	2158624	True	NA	14	True	TATAAA	-1	NA	2163929	2230020	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2227736_2228383_2229784
WTC11_00047904	chr19	+	624	8	FSM	ENSG00000104885.19	ENST00000452696.5	624	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.24126005820341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACACGAGGTATGGCCA	2163643	False	NA	NA	False	NA	NA	NA	2164184	2199928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191083_2191241_2193688_2193784_2194514_2194578_2199883
WTC11_00047905	chr19	+	2514	15	NIC	ENSG00000005206.17	novel	3691	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	49.9377163094597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	2324620	True	NA	29	True	AATAAA	-19	NA	2328695	2353933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339826_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
WTC11_00047908	chr19	+	489	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	-33	0	-21	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	3	True	ATTAAA	-44	NA	2977516	2980407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2977611_2978197_2978285_2980099
WTC11_00047909	chr19	+	1761	14	ISM	ENSG00000104953.20	ENST00000452088.5	1883	16	3957	0	-2369	0	3prime_fragment	FALSE	canonical	2	4	junction_7	3.89507350805297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	2981376	False	NA	4	True	AATAAA	-17	NA	2981536	2995179	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
WTC11_00047912	chr19	+	3673	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	0	0	intron_retention	TRUE	canonical	3	333	junction_11	107.799227591796	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCAGTGTTTGGTCTGG	3179440	True	NA	31	True	AATAAA	-17	NA	3185929	3209571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
WTC11_00047913	chr19	+	1218	9	ISM	ENSG00000161082.13	ENST00000292672.7	1896	13	-37	12112	-37	-1827	5prime_fragment	TRUE	canonical	3	11	junction_5	3.93700393700591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGAGGCAGCCCGCGTGC	3224260	True	NA	NA	False	NA	NA	NA	3224623	3284964	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901
WTC11_00047914	chr19	+	728	4	ISM	ENSG00000161082.13	ENST00000292672.7	1896	13	61268	0	1167	0	3prime_fragment	FALSE	canonical	2	12	junction_2	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3285666	True	NA	NA	False	AATAAA	-17	NA	3285928	3297076	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3286026_3290230_3290375_3293318_3293487_3296757
WTC11_00047915	chr19	+	4349	6	FSM	ENSG00000179855.9	ENST00000644452.3	4410	6	61	0	-59	0	multi-exon	FALSE	canonical	2	11	junction_2	1.85472369909914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTCATTTTGGG	3585329	True	NA	9	True	AATAAA	-20	NA	3585538	3593541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3585823_3586494_3586681_3586813_3586995_3589442_3589556_3589830_3589913_3590038
WTC11_00047916	chr19	+	4305	6	FSM	ENSG00000179855.9	ENST00000644946.1	4050	6	0	-255	0	2	multi-exon	FALSE	canonical	2	2	junction_5	4.95580467734555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCATTTTGGGGG	3585388	False	NA	11	True	AATAAA	-22	NA	3585597	3593543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3585823_3586494_3586681_3586813_3586995_3589442_3589556_3589830_3589926_3590038
WTC11_00047918	chr19	+	3312	16	NIC	ENSG00000089847.13	novel	736	8	NA	NA	-1856	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	18.7858102478085	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	4206456	False	NA	16	True	AATAAA	-19	NA	4207106	4224814	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4207135_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
WTC11_00047919	chr19	+	1253	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	-95	0	-95	0	multi-exon	FALSE	canonical	1	1	junction_1	1.78535710713571	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	NA	False	NA	5	True	AATAAA	-1	NA	4229427	4237528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
WTC11_00047920	chr19	+	800	5	ISM	ENSG00000105251.11	ENST00000543264.7	1910	6	3621	-2	-196	2	3prime_fragment	FALSE	canonical	2	9	junction_2	3.83242742918897	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGTCCTTTCTGGGC	4282870	False	NA	4	True	AATAAA	-15	NA	4282886	4290724	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
WTC11_00047924	chr19	+	3043	21	NIC	ENSG00000160633.13	novel	3014	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	415	junction_18	201.059263651293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	5594524	True	NA	45	True	AATAAA	-14	NA	5623082	5668466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
WTC11_00047927	chr19	+	1715	8	FSM	ENSG00000167733.14	ENST00000339423.7	1697	8	-18	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	33.1508611024923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681008	5688522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00047929	chr19	+	663	4	NIC	ENSG00000167733.14	novel	730	4	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	13.1233464566864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGCCGGCGTGG	5680126	True	NA	NA	False	AATAAA	-16	NA	5681145	5685582	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5681272_5684780_5684906_5684988_5685120_5685301
WTC11_00047930	chr19	+	874	6	FSM	ENSG00000130255.13	ENST00000577222.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6838.83881956579	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTCCCTGAAATAAAGA	5680162	True	NA	8	True	AAGAAA	-19	NA	5681181	5691633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684964_5685120_5690030_5690328_5690505_5690601_5691318_5691454_5691531
WTC11_00047931	chr19	+	1328	6	NIC	ENSG00000167733.14	novel	1687	9	NA	NA	14	-8	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	17.2557236880984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCATATCTGTTGTTC	5680163	True	NA	9	True	AATAAA	-11	NA	5681182	5688514	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5681272_5684780_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00047932	chr19	+	1381	5	ISM	ENSG00000167733.14	ENST00000301382.8	1457	6	160	0	15	0	intron_retention	FALSE	canonical	3	37	junction_2	23.220411279734	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	5680164	True	NA	17	True	AATAAA	-19	NA	5681183	5688522	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502
WTC11_00047933	chr19	+	1464	6	FSM	ENSG00000167733.14	ENST00000301382.8	1457	6	-7	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	21.4848784031933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681016	5688522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00047934	chr19	+	1149	3	NNC	ENSG00000171119.3	novel	1528	3	NA	NA	-15	-3	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_1	42	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTGGCTGGTGATTCAT	5804844	True	NA	5	True	GATAAA	-12	NA	5805051	5828321	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_5805452_5824158_5824335_5827748
WTC11_00047935	chr19	+	1893	2	FSM	ENSG00000187650.4	ENST00000339485.4	2240	2	-20	367	-20	-367	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTCGAGACCACCCTG	5904515	True	NA	NA	False	NA	NA	NA	5904851	5910486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5905082_5908823
WTC11_00047936	chr19	+	1375	5	NIC	ENSG00000267314.1	novel	580	4	NA	NA	11	1168	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.38152730712011	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGGCCCAGTATCTACA	5904515	True	NA	6	True	AATAAA	-19	NA	5904851	5915875	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5905082_5914384_5914490_5914562_5914741_5914939_5915147_5915220
WTC11_00047937	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	294.378441239617	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373687	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
WTC11_00047939	chr19	+	5839	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	-1	-79	-1	79	multi-exon	FALSE	canonical	2	6	junction_3	1.39970842444753	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGAATTTATTTATTT	7068589	True	NA	NA	False	NA	NA	NA	7069701	7088047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
WTC11_00047940	chr19	+	5359	21	NIC	ENSG00000104880.19	novel	5514	20	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.4883143520593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGTGACTGGCGTGCAC	7388015	True	NA	10	True	AATAAA	-13	NA	7395119	7472476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7395248_7440188_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125_7470316_7470536
WTC11_00047941	chr19	+	579	4	FSM	ENSG00000198723.11	ENST00000596524.1	562	4	-17	0	-17	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATGGGCTCGGACTAC	7501223	True	NA	NA	False	NA	NA	NA	7501255	7506066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7501400_7504120_7504225_7505398_7505627_7505963
WTC11_00047942	chr19	+	326	2	FSM	ENSG00000198723.11	ENST00000600112.1	844	2	0	518	0	116	multi-exon	FALSE	canonical	2	5	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGCCCCATGGAGCCCC	7505497	True	NA	NA	False	NA	NA	NA	7505519	7506182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7505627_7505963
WTC11_00047943	chr19	+	1918	13	NIC	ENSG00000090674.16	novel	2253	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	40.6393350776751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7521264	True	NA	5	True	AATAAA	-13	NA	7522661	7533990	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
WTC11_00047944	chr19	+	505	2	FSM	ENSG00000032444.17	ENST00000594098.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGGCAAAAACCAGCAGC	7533834	True	NA	NA	False	AGTAAA	-2	NA	7534190	7534834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7534240_7534378
WTC11_00047945	chr19	+	4487	36	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	45	junction_1	78.0474476304809	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7534185	True	NA	22	True	AATAAA	-16	NA	7534198	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00047947	chr19	+	672	6	FSM	ENSG00000032444.17	ENST00000646984.1	672	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.257854489938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTGGAAGCGGCT	7555205	False	NA	NA	False	NA	NA	NA	7555260	7558953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7556965_7557083_7558849
WTC11_00047948	chr19	+	649	4	FSM	ENSG00000032444.17	ENST00000597202.1	658	4	9	0	9	0	multi-exon	FALSE	canonical	3	365	junction_1	1.69967317119759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7560583	False	NA	22	True	AATAAA	-16	NA	7560599	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00047949	chr19	+	4056	18	NNC	ENSG00000076826.10	novel	4179	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	59.9550004263578	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592417	True	NA	11	True	AATAAA	-16	NA	7595867	7618304	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615596_7616522_7616623_7617325_7617439_7617542_7617662_7617751
WTC11_00047950	chr19	+	4179	19	FSM	ENSG00000076826.10	ENST00000446248.4	4179	19	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	57.5739192068727	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592451	True	NA	11	True	AATAAA	-16	NA	7595901	7618304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7606776_7606810_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
WTC11_00047953	chr19	+	765	2	FSM	ENSG00000181029.9	ENST00000426877.2	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTCTTGTGTCTTGTG	7667668	True	NA	30	True	GATAAA	-23	NA	7680878	7682858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7681027_7682241
WTC11_00047954	chr19	+	3906	20	FSM	ENSG00000142459.9	ENST00000538904.7	3903	20	-3	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_11	14.0047479087958	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7829691	True	NA	22	True	AATAAA	-18	NA	7830214	7864976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7857091_7857125_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
WTC11_00047955	chr19	+	2362	6	FSM	ENSG00000260001.7	ENST00000565886.2	2575	6	213	0	213	0	multi-exon	FALSE	canonical	2	9	junction_1	15.0943698112906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTGCAGTCAGTGAG	7915021	False	NA	10	True	AATAAA	-21	NA	7915042	7919097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7916544_7916621_7916943_7917472_7917600_7917700_7917860_7918056_7918130_7918916
WTC11_00047960	chr19	+	1728	6	FSM	ENSG00000167772.12	ENST00000393962.6	1705	6	-23	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_3	4.89897948556636	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAGAGTTCTTGGAA	NA	False	NA	-32	True	NA	NA	NA	8364145	8374331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8371055_8371152_8371240_8371523_8373704
WTC11_00047961	chr19	+	1881	7	FSM	ENSG00000167772.12	ENST00000301455.7	1872	7	-9	0	-9	0	multi-exon	FALSE	canonical	2	5	junction_3	3.25320354932386	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	NA	False	NA	7	True	AATAAA	-16	NA	8364145	8374370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371152_8371240_8371523_8373704
WTC11_00047962	chr19	+	1433	6	NIC	ENSG00000099785.11	novel	1380	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	73.303751609314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	8412182	True	NA	9	True	AATAAA	-9	NA	8413304	8439004	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413421_8418741_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00047963	chr19	+	2012	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	72.9454590773134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	8412195	True	NA	22	True	AATAAA	-22	NA	8413317	8439017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413795_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00047964	chr19	+	2247	5	FSM	ENSG00000099785.11	ENST00000602117.1	1667	5	-593	13	-593	0	multi-exon	FALSE	canonical	3	131	junction_1	36.3481430062115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	8416689	False	NA	9	True	AATAAA	-9	NA	8417811	8439004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
WTC11_00047968	chr19	+	3225	1	FSM	ENSG00000188000.6	ENST00000344248.4	3225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTATATCTCTCTGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	9185593	9188818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9185600_9188800
WTC11_00047969	chr19	+	975	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	17	junction_2	17.6589920437153	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	9323155	True	NA	NA	False	NA	NA	NA	9324170	9342148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
WTC11_00047970	chr19	+	618	7	FSM	ENSG00000270011.8	ENST00000603024.5	610	7	-8	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_3	15.8710078094899	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGCAGGGTGGCTGAC	9323155	True	NA	NA	False	NA	NA	NA	9324170	9378311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9341101_9341185_9364861_9364949_9371609_9371753_9376315_9376424_9378258
WTC11_00047971	chr19	+	5006	6	FSM	ENSG00000188321.14	ENST00000393883.6	5095	6	7	82	7	-55	multi-exon	FALSE	canonical	3	16	junction_5	17.9822134343912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATATAATGTACATTTAA	9323243	True	NA	NA	False	ATTAAA	-34	NA	9324258	9345816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
WTC11_00047975	chr19	+	408	2	FSM	ENSG00000266950.1	ENST00000590046.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCTGAAGTCTAGTAC	9793489	False	NA	NA	False	GATAAA	-15	NA	9793620	9802301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9793649_9801921
WTC11_00047976	chr19	+	369	4	NIC	ENSG00000198258.11	novel	407	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2034.88285221096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787971	True	NA	22	True	AATAAA	-14	NA	9827917	9830115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9827985_9828326_9828394_9828591_9828676_9829964
WTC11_00047977	chr19	+	1482	6	FSM	ENSG00000080511.5	ENST00000591589.3	1481	6	-4	3	-4	-2	multi-exon	FALSE	canonical	0	0	junction_3	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTGTAGTTACATTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	10013478	10022276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10013601_10017056_10017216_10018730_10018911_10020708_10020803_10021254_10021439_10021533
WTC11_00047979	chr19	+	1195	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	-19	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	10286797	True	NA	1	True	AATAAA	-41	NA	10286954	10288502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10287407_10287612_10287839_10287985
WTC11_00047980	chr19	+	717	1	FSM	ENSG00000105376.5	ENST00000588912.1	928	1	194	17	163	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCCTTTAAACCGGAGGC	10290157	False	NA	NA	False	NA	NA	NA	10290186	10290903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10290200_10290900
WTC11_00047985	chr19	+	3773	22	NIC	ENSG00000129353.15	novel	3301	22	NA	NA	-37	0	intron_retention	TRUE	canonical	3	152	junction_21	135.899589450073	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	10599255	True	NA	12	True	AATAAA	-12	NA	10602419	10644550	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
WTC11_00047987	chr19	+	4230	20	FSM	ENSG00000129351.17	ENST00000587928.5	4230	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	460.801072925036	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	10624907	True	NA	10	True	AATAAA	-15	NA	10654303	10689847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415_10684477_10687345_10687709_10688549_10688679_10689178
WTC11_00047988	chr19	+	6040	20	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	537	junction_17	365.452749218497	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTTCATTCACTCA	10624912	True	NA	16	True	AATAAA	-16	NA	10654308	10692398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
WTC11_00047991	chr19	+	2034	4	FSM	ENSG00000213339.9	ENST00000587861.5	2034	4	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	34.3931517731203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	10706220	False	NA	25	True	NA	NA	NA	10711039	10713364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10712629_10712757_10712868_10712952_10713041_10713117
WTC11_00047992	chr19	+	3625	21	NIC	ENSG00000079805.19	novel	3633	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.103792917478	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAATAAAGGGAAGACG	10704055	True	NA	-6	True	NA	NA	NA	10718054	10831874	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
WTC11_00047993	chr19	+	376	1	FSM	ENSG00000267544.1	ENST00000590455.1	412	1	48	-12	48	12	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTTTTTTTTGAGA	10841846	False	NA	NA	False	AATAAA	-3	NA	10841886	10842262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10841900_10842300
WTC11_00047994	chr19	+	2766	16	FSM	ENSG00000142453.12	ENST00000586221.5	2766	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	354.377852330281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGTTTTCTTCTCCTTCT	10871815	False	NA	18	True	AATAAA	-23	NA	10871827	10922777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919832_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921374_10921444_10921614
WTC11_00047996	chr19	+	5331	18	FSM	ENSG00000130164.14	ENST00000252444.9	5337	18	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	80.3505296339529	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTGTCTAAACTCGAT	11090458	True	NA	15	True	ATTAAA	-14	NA	11090604	11133816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11090920_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
WTC11_00047998	chr19	+	3281	17	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	8	0	intron_retention	FALSE	canonical	3	485	junction_11	145.719859126167	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413594	True	NA	15	True	AATAAA	-16	NA	11435642	11450965	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
WTC11_00047999	chr19	+	2071	18	NIC	ENSG00000130175.10	novel	2100	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	257.480956395952	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413594	True	NA	18	True	AATAAA	-19	NA	11435642	11450968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435711_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
WTC11_00048000	chr19	+	3275	17	ISM	ENSG00000130175.10	ENST00000591462.6	2063	18	8	-3	8	0	intron_retention	FALSE	canonical	3	170	junction_11	216.383629232897	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413594	True	NA	18	True	AATAAA	-19	NA	11435642	11450968	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
WTC11_00048004	chr19	+	4443	4	FSM	ENSG00000197044.11	ENST00000357901.5	4448	4	5	0	5	0	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATTGTCAGGTGTCTGT	11766835	True	NA	16	True	AATAAA	-30	NA	11767004	11784078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11767197_11777610_11777738_11778329_11778394_11780018
WTC11_00048008	chr19	+	4554	3	FSM	ENSG00000196757.8	ENST00000482090.1	3113	3	-1451	10	-1451	0	multi-exon	FALSE	canonical	3	39	junction_1	5.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	NA	False	NA	23	True	AATAAA	-25	NA	11945302	11950763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11947308_11947513_11947575_11948275
WTC11_00048009	chr19	+	2875	4	FSM	ENSG00000197054.12	ENST00000358987.8	2862	4	-13	0	-10	0	multi-exon	FALSE	canonical	1	5	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAAATACAGCCTTTT	11964790	True	NA	NA	False	AATAAA	-19	NA	11965026	11980617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11965212_11977037_11977165_11977370_11977432_11978115
WTC11_00048010	chr19	+	6515	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	73	0	-73	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACTGACAAACATTAT	12063200	True	NA	56	True	NA	NA	NA	12064730	12081492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
WTC11_00048018	chr19	+	866	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	309	273	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGATCTCTCCTGGGGCT	12825829	True	NA	NA	False	NA	NA	NA	12826019	12833256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_12826076_12826784_12826893_12832554
WTC11_00048019	chr19	+	1595	12	ISM	ENSG00000105613.10	ENST00000251472.9	4853	26	11	16031	11	0	5prime_fragment	FALSE	canonical	3	37	junction_1	8.58982677164925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTATTTGTTTTTCAT	12837635	True	NA	15	True	NA	NA	NA	12838525	12858921	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
WTC11_00048024	chr19	+	4880	7	NIC	ENSG00000160877.6	novel	4524	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	11	junction_1	45.8672601705787	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	13115826	True	NA	16	True	AATAAA	-21	NA	13116849	13141147	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13116936_13117993_13118455_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
WTC11_00048025	chr19	+	4770	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	-1836	0	-272	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	13150123	False	NA	23	True	AATAAA	-19	NA	13150138	13154908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13150100_13154900
WTC11_00048026	chr19	+	2063	2	FSM	ENSG00000160888.7	ENST00000292433.4	2110	2	44	3	40	0	multi-exon	FALSE	canonical	2	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	13148950	True	NA	23	True	AATAAA	-19	NA	13150454	13154908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13150553_13152943
WTC11_00048027	chr19	+	2037	11	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	41.3237220008072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731321	True	NA	8	True	ATTAAA	-14	NA	13731767	13763289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
WTC11_00048029	chr19	+	3313	6	NIC	ENSG00000037757.14	novel	3178	6	NA	NA	0	-8	intron_retention	FALSE	canonical	3	16	junction_3	16.0673582147159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCACCGTTTTGTTCG	13761671	True	NA	17	True	AATAAA	-12	NA	13764580	13774274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13764721_13764870_13765110_13765953_13766130_13768358_13768738_13768823_13769049_13772120
WTC11_00048030	chr19	+	610	4	FSM	ENSG00000132024.18	ENST00000589679.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.6499970227461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGCCGCCCGGCGCTAT	13919679	False	NA	NA	False	NA	NA	NA	13919693	13923399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13919952_13920556_13920669_13920749_13920923_13923332
WTC11_00048033	chr19	+	1535	3	FSM	ENSG00000141854.10	ENST00000587086.3	1523	3	-12	0	-12	0	multi-exon	FALSE	canonical	2	9	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGCCTGTTTTTTTCTG	14072619	True	NA	NA	False	AATAAA	-19	NA	14072773	14075062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14073878_14074389_14074464_14074705
WTC11_00048034	chr19	+	2187	1	FSM	ENSG00000141854.10	ENST00000591982.1	2187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGCCTGTTTTTTTCTG	14072721	False	NA	NA	False	AATAAA	-19	NA	14072875	14075062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14072900_14075100
WTC11_00048036	chr19	+	2940	22	FSM	ENSG00000123143.13	ENST00000342216.8	2960	22	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	198.164067712656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCGTGTCTTCTTGTG	14439726	False	NA	24	True	AAAAAG	-27	NA	14440279	14471866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14440330_14441142_14441444_14443469_14443622_14446425_14446562_14450317_14450464_14450895_14451110_14451828_14452024_14458030_14458141_14458231_14458376_14463666_14463743_14463827_14463970_14464059_14464154_14467564_14467642_14467717_14467794_14467875_14467968_14469340_14469518_14469751_14469815_14469911_14469989_14470162_14470306_14470574_14470683_14470770_14470852_14471580
WTC11_00048039	chr19	+	1129	10	FSM	ENSG00000160961.12	ENST00000597007.5	1129	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	25.3508711224421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCCTGTATAGAGATGT	14688698	True	NA	NA	False	NA	NA	NA	14690048	14716183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14701583_14701898_14705053_14705171_14706685_14706774_14715381_14715471_14716111
WTC11_00048041	chr19	+	1576	11	FSM	ENSG00000160961.12	ENST00000597301.5	1569	11	-7	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	12.0066648158429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAACTCTATAAATAT	14688748	True	NA	NA	False	NA	NA	NA	14690098	14718243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717734_14718227
WTC11_00048042	chr19	+	3116	8	FSM	ENSG00000105137.13	ENST00000600440.5	3058	8	-69	11	-65	0	multi-exon	FALSE	canonical	2	13	junction_1	30.2459307433349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	15106119	True	NA	18	True	AATAAA	-16	NA	15107335	15114974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15107522_15109256_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
WTC11_00048043	chr19	+	951	1	FSM	ENSG00000225067.4	ENST00000471227.3	466	1	2	-487	2	487	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTATTACATTT	NA	False	NA	6	True	AATAAA	-29	NA	15611658	15612609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15611700_15612600
WTC11_00048045	chr19	+	1954	6	FSM	ENSG00000196684.12	ENST00000613986.4	1957	6	3	0	3	0	multi-exon	TRUE	canonical	2	4	junction_5	1.95959179422654	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTGCAGGGTCTCTCT	16143562	True	NA	NA	False	AATAAA	-33	NA	16143687	16158575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16143775_16148723_16148876_16152551_16152642_16153042_16153209_16154398_16154492_16157209
WTC11_00048047	chr19	+	3318	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	28	0	16	0	multi-exon	FALSE	canonical	2	9	junction_5	3.86490620843508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	16495798	True	NA	4	True	ATTAAA	-17	NA	16496421	16521352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
WTC11_00048048	chr19	+	2505	1	FSM	ENSG00000279748.1	ENST00000624284.1	2505	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAAATCATGGTCT	NA	False	NA	NA	False	AAAACA	-27	NA	16586904	16589409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16586900_16589400
WTC11_00048049	chr19	+	5138	20	FSM	ENSG00000127511.10	ENST00000379803.5	5129	20	-9	0	0	0	multi-exon	TRUE	canonical	3	20	junction_10	118.828422129628	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGTGAGGGTGTGTTGG	16819016	True	NA	27	True	ATTAAA	-24	NA	16829397	16880353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883_16862980_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
WTC11_00048051	chr19	+	7601	40	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_39	35.8024384038399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	17071894	True	NA	5	True	AATAAA	-12	NA	17075776	17213284	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
WTC11_00048052	chr19	+	7627	40	FSM	ENSG00000099331.14	ENST00000595618.5	7623	40	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	46.2943729602676	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACGCCTGCTCATATGG	17071894	True	NA	16	True	AATAAA	-23	NA	17075776	17213295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210849_17211646_17211787_17211894
WTC11_00048054	chr19	+	748	6	NIC	ENSG00000053501.14	novel	845	8	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	42.6773944846683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17215156	True	NA	9	True	AATAAA	-16	NA	17215737	17219829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17215852_17215991_17216071_17216168_17216322_17218363_17218392_17219212_17219388_17219630
WTC11_00048057	chr19	+	959	6	NIC	ENSG00000099330.9	novel	878	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	74.0675367485648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224438	True	NA	14	True	AATAAA	-14	NA	17226204	17229215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226354_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
WTC11_00048058	chr19	+	888	6	FSM	ENSG00000099330.9	ENST00000600232.5	878	6	-10	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	60.081944043115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224476	True	NA	18	True	AATAAA	-18	NA	17226242	17229219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
WTC11_00048059	chr19	+	1145	6	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	64.6362127603405	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224458	True	NA	14	True	AATAAA	-14	NA	17226224	17229215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226354_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
WTC11_00048060	chr19	+	1044	5	FSM	ENSG00000099330.9	ENST00000597836.5	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	35.6966384972031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	17225672	True	NA	-36	True	NA	NA	NA	17226614	17229165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
WTC11_00048061	chr19	+	559	2	NNC	ENSG00000130312.7	novel	863	3	NA	NA	6	-1396	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTGTATGGCCTGCA	17290854	True	NA	12	True	AATAAA	-20	NA	17292614	17297034	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17292855_17296715
WTC11_00048062	chr19	+	783	3	NNC	ENSG00000130312.7	novel	764	2	NA	NA	0	29418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	458.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGGCAACGTAGTGAGA	17295998	True	NA	NA	False	NA	NA	NA	17305871	17336261	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17305958_17306165_17306835_17336233
WTC11_00048064	chr19	+	2556	9	NIC	ENSG00000130299.17	novel	2493	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	11	junction_1	109.637969586271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	17332073	True	NA	24	True	TATAAA	-15	NA	17337600	17342723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17337665_17337898_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
WTC11_00048065	chr19	+	2522	9	NNC	ENSG00000130299.17	novel	2566	9	NA	NA	5	4	intron_retention	FALSE	canonical	3	9	junction_3	90.5590277112117	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATTTCTTTTTAAAAA	17332069	True	NA	36	True	TATAAA	-27	NA	17337596	17342735	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17337665_17338007_17338256_17338364_17338452_17338542_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
WTC11_00048068	chr19	+	908	6	FSM	ENSG00000141971.13	ENST00000524382.1	908	6	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	25.6935789644028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTTCTCGCCCTCTGG	17422269	False	NA	-3	True	AATAAA	-5	NA	17422284	17425318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
WTC11_00048069	chr19	+	1096	6	FSM	ENSG00000130313.7	ENST00000594761.5	880	6	29	-245	-5	0	multi-exon	TRUE	canonical	2	2	junction_2	187.225639269839	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17501955	True	NA	9	True	ATTAAA	-17	NA	17511664	17521288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17511961_17516172_17516281_17516370_17516475_17517287_17517390_17517709_17517851_17520943
WTC11_00048073	chr19	+	598	7	FSM	ENSG00000130475.15	ENST00000596309.5	598	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	21.2105843599107	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTCATCAAGGACGTT	17746556	True	NA	NA	False	NA	NA	NA	17747752	17766751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17754316_17754362_17754591_17754759_17755117_17755192_17762761_17762854_17764374_17764450_17766668
WTC11_00048074	chr19	+	589	6	FSM	ENSG00000130475.15	ENST00000593833.5	580	6	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.3724259778209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCTGACTTTGAGCAGA	17746556	True	NA	NA	False	AATACA	-8	NA	17747752	17770856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791
WTC11_00048075	chr19	+	3207	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	-22	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	62.9296254168261	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAAAGGAAAC	17746499	True	NA	-10	True	AATAAA	-14	NA	17747695	17788538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17747815_17754316_17754362_17754591_17754686_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
WTC11_00048079	chr19	+	954	2	FSM	ENSG00000105640.13	ENST00000600238.1	954	2	0	0	0	0	multi-exon	FALSE	canonical	3	22372	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCACAGACCGAGACAT	17861250	False	NA	NA	False	NA	NA	NA	17861332	17862907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17861473_17862093
WTC11_00048082	chr19	+	2597	9	NIC	ENSG00000105642.16	novel	3595	10	NA	NA	11	-956	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	13.0743068649929	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGATTCCTCATCAGAAC	17966651	True	NA	9	True	NA	NA	NA	17967117	17999124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989819_17993489_17993560_17998151
WTC11_00048084	chr19	+	5936	27	NIC	ENSG00000099308.11	novel	6020	28	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	6.55111897032206	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCCAACGTCTGGA	18097213	True	NA	6	True	AATAAA	-17	NA	18097771	18151687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18097832_18107586_18107619_18121684_18121774_18121852_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147045_18147442_18147625_18149190
WTC11_00048089	chr19	+	1812	18	NIC	ENSG00000130511.16	novel	1725	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_17	90.0992148251622	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18417067	True	NA	26	True	AATAAA	-26	NA	18419425	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431352_18431419_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433933_18434216
WTC11_00048090	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	390.786706529278	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	18538496	True	NA	46	True	AATAAA	-36	NA	18557761	18569387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
WTC11_00048094	chr19	+	1780	7	FSM	ENSG00000105696.9	ENST00000598660.1	1683	7	-63	-34	-56	1	multi-exon	FALSE	canonical	3	97	junction_2	7.10438049531571	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGCTGAGCCTGCTTC	18612803	False	NA	11	True	AATAAA	-18	NA	18612813	18621040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618493_18620407
WTC11_00048098	chr19	+	342	5	FSM	ENSG00000105671.12	ENST00000601772.1	342	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	68.8875895934819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCGGCAAGCTGAGA	18922697	False	NA	-94	True	NA	NA	NA	18922709	18925185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18925129
WTC11_00048108	chr19	+	545	6	NNC	ENSG00000186010.19	novel	521	5	NA	NA	0	48986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3859.08856596995	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTAGGTGTGATGGCAC	19476256	True	NA	NA	False	ACTAAA	-23	NA	19516224	19578040	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006_19528196_19578013
WTC11_00048110	chr19	+	508	1	NIC	ENSG00000250067.12	novel	878	6	NA	NA	8153	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCACCGCCGCCTCGC	19536980	False	NA	-6	True	AATAAA	-7	NA	19537063	19537571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19537100_19537600
WTC11_00048118	chr19	+	2268	2	FSM	ENSG00000256771.5	ENST00000355650.4	2268	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCCTACTCACATCTT	19859290	True	NA	20	True	AATACA	-19	NA	19865906	19893648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19866000_19891473
WTC11_00048121	chr19	+	595	1	FSM	ENSG00000271524.1	ENST00000605448.1	595	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAGAAATAGAATCTGAC	NA	False	NA	NA	False	AATATA	-28	NA	20221868	20222463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20221900_20222500
WTC11_00048128	chr19	+	4322	6	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	0	1472	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	23.777300099044	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	21074413	True	NA	16	True	AATAAA	-16	NA	21082202	21126742	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806_21118886_21124960
WTC11_00048132	chr19	+	3604	5	NNC	ENSG00000172687.14	novel	1142	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	93.8735852090459	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	21350297	True	NA	8	True	ATTAAA	-12	NA	21358996	21379302	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21376161
WTC11_00048133	chr19	+	5203	4	NIC	ENSG00000196268.12	novel	546	5	NA	NA	-9	154	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	5.79271573232759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTATTTTAATCAT	21395207	True	NA	NA	False	NA	NA	NA	21397109	21427731	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21397268_21405128_21405256_21405757_21405857_21422912
WTC11_00048136	chr19	+	519	1	FSM	ENSG00000268140.1	ENST00000595406.1	1051	1	673	-141	673	141	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATAAGTACAACTTGG	NA	False	NA	NA	False	NA	NA	NA	22138603	22139122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_22138600_22139100
WTC11_00048139	chr19	+	594	4	NIC	ENSG00000288920.1	novel	1610	7	NA	NA	291	-1543	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	110.243165572998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAGCTTCTGCTGGCAG	23782359	False	NA	NA	False	TATAAA	-45	NA	23782371	23827325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_23782500_23807825_23807940_23808718_23808815_23827069
WTC11_00048143	chr19	+	874	6	NIC	ENSG00000213096.11	novel	4244	5	NA	NA	105	7	combination_of_known_splicesites	FALSE	canonical	3	56	junction_3	42.5600751879035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGTGTCAAATTATT	24028745	True	NA	NA	False	AAGAAA	-13	NA	24033509	24126552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24105939_24106067_24106547_24106644_24126253
WTC11_00048145	chr19	+	4072	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	12	-102	-4	95	multi-exon	FALSE	canonical	3	20	junction_1	68.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAATTTACTAGAAAACAA	24084345	True	NA	104	True	AATAAA	-17	NA	24087171	24130063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24106547_24106644_24126253
WTC11_00048146	chr19	+	3976	2	FSM	ENSG00000213096.11	ENST00000616028.2	3886	2	12	-102	-4	95	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAATTTACTAGAAAACAA	24084345	True	NA	104	True	AATAAA	-17	NA	24087171	24130063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24126253
WTC11_00048151	chr19	+	1896	10	NIC	ENSG00000105176.18	novel	2495	10	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	148	junction_9	140.420796180623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	29935600	True	NA	32	True	AGTAAA	-22	NA	29942210	30015704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29942665_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30015535
WTC11_00048152	chr19	+	1901	11	NIC	ENSG00000105176.18	novel	3460	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	148	junction_10	112.069442757605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	29935630	True	NA	32	True	AGTAAA	-22	NA	29942240	30015704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30015535
WTC11_00048155	chr19	+	6202	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTAAAACCTTTCAACTA	NA	False	NA	43	True	NA	NA	NA	31379413	31385615	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_31379400_31385600
WTC11_00048165	chr19	+	2040	1	FSM	ENSG00000277013.1	ENST00000610908.1	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCTTCCTACCAAT	33906075	True	NA	18	True	AATAAA	-21	NA	33906351	33908391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33906400_33908400
WTC11_00048172	chr19	+	1962	5	NIC	ENSG00000089335.22	novel	2893	5	NA	NA	33	-511	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.831662561308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGTATTAATCCCTTAA	34674208	True	NA	NA	False	AATAAA	-15	NA	34677749	34685821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34677857_34678736_34678814_34682776_34682898_34683151_34683239_34684251
WTC11_00048174	chr19	+	2583	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_4	9.44722181384559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926412	True	NA	5	True	AATAAA	-20	NA	34926899	34945168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
WTC11_00048175	chr19	+	1898	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	29.3115449382435	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040647	True	NA	20	True	AATAAA	-16	NA	35041713	35066573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
WTC11_00048176	chr19	+	2189	10	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	39.0634178904503	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040647	True	NA	20	True	AATAAA	-16	NA	35041713	35066573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35042523_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
WTC11_00048192	chr19	+	3259	16	NNC	ENSG00000126259.20	novel	2980	15	NA	NA	-4442	0	intron_retention	TRUE	canonical	2	8	junction_1	8.32239281830786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35851227	True	NA	11	True	AATAAA	-19	NA	35851418	35867136	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35851724_35856936_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
WTC11_00048193	chr19	+	3250	16	NNC	ENSG00000126259.20	novel	2980	15	NA	NA	-4442	0	intron_retention	FALSE	canonical	2	3	junction_1	9.20724352525409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35851227	True	NA	11	True	AATAAA	-19	NA	35851418	35867136	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35851724_35856945_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
WTC11_00048196	chr19	+	2141	15	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	-83	-7	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	46.0540941919037	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGTTTCCCTACTAA	35870323	False	NA	-42	True	NA	NA	NA	35870370	35879744	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35870571_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878583_35878655_35878889_35878953_35879073_35879218_35879342
WTC11_00048198	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.08248290463863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	35902448	True	NA	10	True	AATAAA	-14	NA	35902537	35904270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
WTC11_00048202	chr19	+	4604	31	NIC	ENSG00000075702.19	novel	4727	32	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	64.7814188037142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	36048516	True	NA	12	True	AATAAA	-18	NA	36054908	36105108	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00048203	chr19	+	5169	31	FSM	ENSG00000075702.19	ENST00000680806.1	5159	31	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.229685978282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGAGGAAGGCACGGGGG	36048537	True	NA	-94	True	NA	NA	NA	36054929	36105002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36075054_36075162_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102013_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00048204	chr19	+	1705	6	ISM	ENSG00000075702.19	ENST00000680739.1	1667	7	449	1	233	-1	3prime_fragment	FALSE	canonical	3	253	junction_3	28.4253408071038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTCCTGGTGTCTGTTT	36102031	False	NA	11	True	AATAAA	-17	NA	36102462	36105107	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00048207	chr19	+	1490	11	FSM	ENSG00000126247.11	ENST00000588815.5	1471	11	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.051405161506	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	36131257	True	NA	23	True	AATAAA	-23	NA	36140107	36150352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36140266_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
WTC11_00048211	chr19	+	2305	1	FSM	ENSG00000267053.8	ENST00000586340.1	2305	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATGTTTTTTTTGGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	36310357	36312662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36310400_36312700
WTC11_00048212	chr19	+	2059	4	FSM	ENSG00000233527.10	ENST00000670019.1	2080	4	21	0	-11	0	multi-exon	FALSE	canonical	3	6	junction_3	14.7271480229163	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAGAACCATAAGCTAA	36572500	True	NA	NA	False	NA	NA	NA	36573365	36581812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36573556_36574820_36574901_36577140_36577284_36580166
WTC11_00048216	chr19	+	3509	5	FSM	ENSG00000161298.19	ENST00000439428.5	2742	5	-23	-744	-1	744	multi-exon	FALSE	canonical	2	12	junction_2	10.256095748383	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGTAGGCCCCCTGG	36604495	True	NA	NA	False	NA	NA	NA	36605311	36629311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36605348_36607551_36607623_36609926_36610054_36610649_36610743_36626129
WTC11_00048217	chr19	+	2810	6	NIC	ENSG00000189042.14	novel	2825	6	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	30.6032677993707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36686219	True	NA	15	True	AATAAA	-17	NA	36687645	36721326	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36687687_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
WTC11_00048220	chr19	+	2440	4	FSM	ENSG00000267254.7	ENST00000655476.1	2433	4	-7	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	27.9205221218292	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTATAATACCCAAAAAA	36795861	True	NA	NA	False	NA	NA	NA	36797517	36804507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36802457
WTC11_00048222	chr19	+	4103	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	-7	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_2	5.14511634681104	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	36915878	True	NA	17	True	AATAAA	-27	NA	36916324	36952734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
WTC11_00048230	chr19	+	2982	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	52.1429658620306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCAATTGTCAGTG	37313774	True	NA	18	True	AATAAA	-19	NA	37317910	37364444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362105
WTC11_00048231	chr19	+	3060	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	55.209952806436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCAATTGTCAGTG	37313786	True	NA	18	True	AATAAA	-19	NA	37317922	37364444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37323532_37323571_37324207_37324266_37324795_37324937_37347189_37347317_37347776_37347873_37362108
WTC11_00048232	chr19	+	6313	1	FSM	ENSG00000181666.19	ENST00000588820.1	1962	1	-3834	-517	-3834	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	NA	False	NA	20	True	AATAAA	-21	NA	37358133	37364446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37358100_37364400
WTC11_00048233	chr19	+	5283	5	FSM	ENSG00000171827.11	ENST00000330173.6	5283	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.03108891324554	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTCTATCAGTTCT	37468512	True	NA	7	True	AATAAA	-15	NA	37469355	37488652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476435_37483878
WTC11_00048237	chr19	+	1057	1	FSM	ENSG00000267422.1	ENST00000587765.1	1094	1	90	-53	90	53	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTCCTTGTAACAAAG	NA	False	NA	NA	False	NA	NA	NA	37791861	37792918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37791900_37792900
WTC11_00048240	chr19	+	337	2	FSM	ENSG00000105738.11	ENST00000599644.1	545	2	-32	240	5	-240	multi-exon	FALSE	canonical	3	8	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCACTTACTACGTATT	37904232	True	NA	4	True	AATAAA	-15	NA	37907212	37907734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37907359_37907543
WTC11_00048243	chr19	+	524	3	FSM	ENSG00000167644.12	ENST00000591852.1	502	3	-22	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	89.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301625	True	NA	27	True	ATTAAA	-18	NA	38304250	38305006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38304491_38304564_38304687_38304844
WTC11_00048247	chr19	+	1067	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	1	-20803	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	6.73300329224139	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTGCACCTTTA	38431828	True	NA	16	True	AATAAA	-32	NA	38433691	38447083	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
WTC11_00048250	chr19	+	511	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	5	0	-5	multi-exon	FALSE	canonical	3	5	junction_1	4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGTTTTCTTTTCAGTT	38596288	True	NA	6	True	AATACA	-12	NA	38596345	38601689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38596437_38597252_38597396_38601412
WTC11_00048251	chr19	+	787	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	50	junction_1	969.971649070219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	38619062	False	NA	18	True	AATAAA	-18	NA	38619074	38636955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
WTC11_00048253	chr19	+	370	2	FSM	ENSG00000178934.5	ENST00000600304.1	532	2	161	1	161	-1	multi-exon	FALSE	canonical	3	33	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGACTGTGTCTGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	38790688	38791747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38790891_38791579
WTC11_00048255	chr19	+	2836	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	85.1931719283293	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	39116103	True	NA	4	True	ATTAAA	-14	NA	39125786	39179401	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
WTC11_00048256	chr19	+	3037	11	FSM	ENSG00000130669.17	ENST00000593690.5	3025	11	-12	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	150.143964247651	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	39116118	True	NA	4	True	ATTAAA	-14	NA	39125801	39179401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39125920_39168229_39168313_39168624_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
WTC11_00048258	chr19	+	3178	14	NIC	ENSG00000179134.16	novel	4680	14	NA	NA	11	251	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	206.525669278678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCAGGTCTGGTTGGTG	39338385	True	NA	NA	False	NA	NA	NA	39342452	39384439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383707
WTC11_00048259	chr19	+	4570	13	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	157.831375383843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	39338400	True	NA	7	True	AAAACA	-14	NA	39342467	39385698	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
WTC11_00048261	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	39391202	False	NA	-77	True	NA	NA	NA	39391302	39399976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39391639_39393552_39393638_39397456
WTC11_00048265	chr19	+	789	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	-3	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	640.640825007794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	39459779	True	NA	-13	True	NA	NA	NA	39480837	39490119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
WTC11_00048278	chr19	+	1019	6	FSM	ENSG00000160410.15	ENST00000597396.5	1019	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	173.136246927095	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACATCTTGCTTATTCT	40586884	False	NA	10	True	AATAAA	-10	NA	40586895	40591392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590732_40590854_40590975
WTC11_00048282	chr19	+	5092	33	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	72.1794638384077	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40598133	False	NA	14	True	ATTAAA	-15	NA	40598544	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40598623_40599196_40599256_40599401_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00048285	chr19	+	1949	10	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	81.8034380031536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40613350	False	NA	14	True	ATTAAA	-15	NA	40613366	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40613530_40613915_40614039_40614314_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00048286	chr19	+	2363	11	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	87.6235698884724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40613202	True	NA	14	True	ATTAAA	-15	NA	40613596	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00048287	chr19	+	2118	9	NIC	ENSG00000090006.18	novel	2446	11	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	84.5679275789587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40614064	False	NA	14	True	ATTAAA	-15	NA	40614126	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614447_40619346_40619494_40622400_40622668_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00048290	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	417.518574437114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40799498	False	NA	21	True	AATAAA	-20	NA	40799514	40808432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
WTC11_00048292	chr19	+	564	2	FSM	ENSG00000269858.6	ENST00000601733.1	584	2	20	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCTGCAGCGCTGGTCAC	40799636	False	NA	NA	False	NA	NA	NA	40799729	40800854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40799778_40800338
WTC11_00048301	chr19	+	3148	28	NIC	ENSG00000076928.18	novel	3171	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	58.9294293252834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41884342	False	NA	22	True	AATATA	-16	NA	41884369	41907452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
WTC11_00048325	chr19	+	2950	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	-7	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	11.2805141726785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	44211903	True	NA	14	True	AATAAA	-20	NA	44212567	44237267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
WTC11_00048329	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592176.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	404.94965393518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGCTTCTTTAC	44914789	True	NA	23	True	AATAAA	-18	NA	44914868	44919349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914950_44915097_44915218_44916189_44916326_44919172
WTC11_00048343	chr19	+	2297	14	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-11	173	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	29.9782958963993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGGCACAGAGAGATGA	46292727	True	NA	NA	False	AGTAAA	-45	NA	46297030	46338711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
WTC11_00048350	chr19	+	2268	14	NNC	ENSG00000105321.14	novel	2163	14	NA	NA	23	134	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	61.4584094707515	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGAACTGTGTTTCTGG	47254424	True	NA	6	True	ATTAAA	-18	NA	47256547	47273835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_47256610_47258329_47258404_47258562_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
WTC11_00048351	chr19	+	2100	13	NNC	ENSG00000105321.14	novel	834	5	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	60.2528814433154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47256414	True	NA	9	True	AATAAA	-18	NA	47257476	47271953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271725_47271744
WTC11_00048358	chr19	+	674	4	FSM	ENSG00000178980.16	ENST00000601937.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_1	138.602549279105	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGAGGAGTGTAT	47780802	False	NA	32	True	AATAAA	-22	NA	47780814	47784686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780918_47781107_47781183_47781289_47781389_47784289
WTC11_00048361	chr19	+	2387	6	FSM	ENSG00000178150.10	ENST00000594024.5	569	6	3	-1821	3	41	multi-exon	FALSE	canonical	2	4	junction_3	41.2863173460651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCAAGGTGGGGGATT	48270257	True	NA	48	True	NA	NA	NA	48271374	48287649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48271450_48271748_48271829_48279730_48279809_48281551_48281690_48282370_48282498_48285760
WTC11_00048366	chr19	+	784	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-1997	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	3.83242742918897	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	48589045	True	NA	6	True	AATAAA	-14	NA	48589103	48599423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
WTC11_00048385	chr19	+	584	4	FSM	ENSG00000142534.7	ENST00000596873.1	583	4	-1	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1605.4553525056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTTTGGAATGTTCTC	49438922	True	NA	NA	False	NA	NA	NA	49496430	49498251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916
WTC11_00048387	chr19	+	3418	12	NIC	ENSG00000126464.15	novel	7416	14	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_3	17.9669117367279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCAGGCTGGAGTGCCTC	49589153	True	NA	37	True	NA	NA	NA	49591195	49626439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49591741_49593326_49593440_49594453_49594616_49601490_49601919_49614532_49614650_49614875_49615010_49615746_49616220_49620351_49620478_49621524_49621623_49624843_49624991_49625104_49625201_49625460
WTC11_00048390	chr19	+	619	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	1	0	0	multi-exon	FALSE	canonical	3	87	junction_4	478.772584323706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49650869	True	NA	28	True	AATAAA	-38	NA	49665960	49673915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
WTC11_00048392	chr19	+	866	4	FSM	ENSG00000126457.22	ENST00000530361.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2281.62666144622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACGCCAATAAATCCT	49685183	False	NA	-1	True	NA	NA	NA	49685304	49688419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49685640_49686092_49686244_49686604_49686727_49688161
WTC11_00048395	chr19	+	700	3	FSM	ENSG00000169169.15	ENST00000599937.5	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49712543	False	NA	21	True	AATAAA	-16	NA	49712554	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49712850_49712971_49713065_49713419
WTC11_00048397	chr19	+	1505	1	FSM	ENSG00000196961.13	ENST00000601356.1	2238	1	734	-1	734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	49805592	False	NA	9	True	AATAAA	-17	NA	49805609	49807114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49805600_49807100
WTC11_00048400	chr19	+	2326	18	NNC	ENSG00000104973.19	novel	2332	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_16	68.2551188239735	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	49812004	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836231_49836407_49836846
WTC11_00048405	chr19	+	6838	41	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-1	0	intron_retention	FALSE	canonical	3	11	junction_5	21.4688145923337	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	50205123	True	NA	7	True	AATAAA	-16	NA	50205456	50310539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
WTC11_00048407	chr19	+	1468	9	FSM	ENSG00000131408.15	ENST00000411902.6	1466	9	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	149.589803713355	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATAAGCCCCAGTCCAGG	50371202	True	NA	NA	False	NA	NA	NA	50376456	50382731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
WTC11_00048409	chr19	+	3384	27	NIC	ENSG00000062822.16	novel	3436	27	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_17	158.915430041659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369497	True	NA	18	True	AATAAA	-18	NA	50384326	50418014	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
WTC11_00048420	chr19	+	2722	3	FSM	ENSG00000198464.14	ENST00000335090.6	2722	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	65.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACTTCAAAAAAGTTT	52297641	False	NA	NA	False	NA	NA	NA	52300393	52324080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52300485_52315833_52315963_52321578
WTC11_00048425	chr19	+	5758	1	FSM	ENSG00000167555.14	ENST00000598479.1	4809	1	-957	8	-957	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATCGTGTTTTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	52412646	52418404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52412600_52418400
WTC11_00048428	chr19	+	3497	1	ISM	ENSG00000258405.11	ENST00000421239.7	6768	6	59810	23	20533	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCTCGTTGCTCACAC	NA	False	NA	-4	True	NA	NA	NA	52513362	52516859	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_52513400_52516900
WTC11_00048438	chr19	+	7556	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	32	0	-32	multi-exon	FALSE	canonical	3	21	junction_3	48.3804368176504	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTTCAAATAAACTCT	53391726	True	NA	-28	True	NA	NA	NA	53395172	53430381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
WTC11_00048463	chr19	+	333	4	NNC	ENSG00000170906.16	novel	945	4	NA	NA	0	3866	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1623.14619044483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATTTCCCCCAAAAG	54103088	True	NA	NA	False	AAAAAG	-2	NA	54103113	54113123	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_54103189_54105933_54106012_54106810_54106961_54113093
WTC11_00048479	chr19	+	1770	12	ISM	ENSG00000131037.15	ENST00000245618.5	2198	15	1318	-4	17	0	3prime_fragment	FALSE	canonical	3	95	junction_5	28.7632111220146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTGCCAACTGCTGT	55081686	False	NA	19	True	TATAAA	-19	NA	55081709	55087923	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
WTC11_00048480	chr19	+	745	2	FSM	ENSG00000131037.15	ENST00000587715.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	55087017	False	NA	1	True	TATAAA	-1	NA	55087068	55087905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55087436_55087527
WTC11_00048481	chr19	+	2235	8	NIC	ENSG00000133247.14	novel	2286	9	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	54.2394539735324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCCTTGGCGGTTTTTT	55335196	True	NA	18	True	ATTAAA	-15	NA	55339902	55348117	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_55339958_55341793_55342047_55342214_55342381_55342741_55342852_55343679_55343844_55346212_55346350_55346499_55346688_55346955
WTC11_00048492	chr19	+	3541	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	-148	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	29.6310647800581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	56368095	True	NA	26	True	AATAGA	-20	NA	56368172	56379828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
WTC11_00048507	chr19	+	5542	3	FSM	ENSG00000105136.22	ENST00000522346.1	5542	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTATGACCATTTCCAG	57487072	False	NA	17	True	AATAAA	-17	NA	57487964	57494665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57491598_57492112_57492212_57492855
WTC11_00048508	chr19	+	2750	4	FSM	ENSG00000183647.11	ENST00000600619.1	2742	4	-8	0	-8	0	multi-exon	FALSE	canonical	2	5	junction_1	13.6707311029399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599013	True	NA	NA	False	AATAAA	-29	NA	57599876	57612722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57600135_57604276_57604407_57605685_57607828_57612502
WTC11_00048509	chr19	+	1380	5	NNC	ENSG00000183647.11	novel	634	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	11.2555541844904	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599051	True	NA	NA	False	AATAAA	-29	NA	57599914	57612722	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685_57606444_57612502
WTC11_00048512	chr19	+	2641	5	FSM	ENSG00000121417.14	ENST00000535785.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.4773827331754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631872	True	NA	15	True	AATAAA	-16	NA	57633215	57642764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57633712_57633906_57634022_57634062_57634628_57634756_57640703
WTC11_00048514	chr19	+	526	2	NIC	ENSG00000268750.7	novel	556	2	NA	NA	13	-2134	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	57811066	True	NA	9	True	CATAAA	-14	NA	57819743	57854099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57819946_57853775
WTC11_00048515	chr19	+	561	2	Fusion	ENSG00000198466.12_ENSG00000269343.9	novel	5794	3	NA	NA	27	-11	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGGGAGTGCCTGGGG	57828280	True	NA	7	True	CATAAA	-12	NA	57830325	57854097	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_57830565_57853775
WTC11_00048516	chr19	+	550	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	-5	0	-4	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	57848282	True	NA	18	True	CATAAA	-23	NA	57849854	57854108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57850072_57853775
WTC11_00048524	chr19	+	3334	7	NIC	ENSG00000198131.15	novel	3302	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	76.4765759345086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224941	True	NA	NA	False	AATAAA	-18	NA	58228916	58263644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58228947_58229467_58229571_58230393_58230498_58243964_58244057_58246300_58246428_58246710_58246795_58260850
WTC11_00048526	chr19	+	766	8	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-2	-2648	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	82.5521480208549	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	58224941	True	NA	12	True	AATAAA	-19	NA	58228916	58274599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58271749_58271777_58274365
WTC11_00048527	chr19	+	853	9	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-2	-2647	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	91.6098213894122	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTTGTGGTATGTTGTT	58224941	True	NA	13	True	AATAAA	-20	NA	58228916	58274600	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58237248_58237335_58243964_58244057_58246300_58246428_58246710_58246795_58271749_58271777_58274365
WTC11_00048529	chr19	+	3521	4	FSM	ENSG00000198131.15	ENST00000269829.5	3547	4	2	24	2	-24	multi-exon	FALSE	canonical	3	102	junction_3	48.5042953424402	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACAGAGCAAGACTG	NA	False	NA	NA	False	NA	NA	NA	58243964	58264068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58244057_58246300_58246428_58246710_58246795_58260850
WTC11_00048531	chr19	+	805	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3857.0755185186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	58285765	True	NA	41	True	AATAAA	-27	NA	58387263	58394800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
WTC11_00048532	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3588.99856331819	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285765	True	NA	45	True	AATAAA	-31	NA	58387263	58394804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
WTC11_00048545	chr19	-	6355	1	FSM	ENSG00000282458.1	ENST00000633719.1	4412	1	25	-1968	-7	806	mono-exon	FALSE	NA	NA	NA	NA	NA	1032	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCCTGGATGGCACCA	-63984	False	NA	NA	False	NA	NA	NA	66499	60144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_60100_66500
WTC11_00048546	chr19	-	398	3	FSM	ENSG00000282458.1	ENST00000632089.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	-68430	True	NA	NA	False	TATAAA	-16	NA	70945	65821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_66048_66345_66500_70927
WTC11_00048547	chr19	-	938	1	FSM	ENSG00000282458.1	ENST00000632292.1	975	1	705	-668	24	668	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGTCCACTAAATAAGA	-68406	False	NA	NA	False	NA	NA	NA	70921	69983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_70000_70900
WTC11_00048548	chr19	-	211	1	FSM	ENSG00000281379.2	ENST00000633205.1	211	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTAGCATTTAACTCT	-191302	False	NA	NA	False	NA	NA	NA	191325	191114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_191100_191300
WTC11_00048549	chr19	-	1297	7	NNC	ENSG00000141934.10	novel	1279	6	NA	NA	0	84842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	295.055362036799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGGCCTTACTCCGTC	-287492	True	NA	NA	False	NA	NA	NA	291393	196197	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_196226_281042_281538_282133_282311_282751_282810_287473_287752_288019_288172_291284
WTC11_00048550	chr19	-	3786	1	FSM	ENSG00000282416.1	ENST00000632679.1	757	1	-2624	-405	-2624	405	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGTGTTCTGTTCTGGG	-200666	False	NA	NA	False	AATGAA	-16	NA	200690	196904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_196900_200700
WTC11_00048552	chr19	-	4001	13	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-1255	0	intron_retention	FALSE	canonical	3	18	junction_3	69.3347355627434	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-334265	False	NA	-3	True	ATTAAA	-18	NA	337449	305572	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_306712_307118_307537_308576_308666_308821_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082
WTC11_00048553	chr19	-	3731	14	NNC	ENSG00000105556.12	novel	2769	14	NA	NA	2	0	intron_retention	FALSE	canonical	2	2	junction_13	70.701807346985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341610	True	NA	-3	True	ATTAAA	-18	NA	344794	305572	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_343809
WTC11_00048555	chr19	-	2335	9	NNC	ENSG00000129951.19	novel	2306	8	NA	NA	0	62303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.481170064575	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACGAGGCCGTCAAAAGA	-817847	True	NA	NA	False	AAAAAG	-4	NA	821952	750184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_750217_812487_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
WTC11_00048556	chr19	-	2663	8	NNC	ENSG00000129951.19	novel	2306	8	NA	NA	0	62303	intron_retention	FALSE	non_canonical	0	0	junction_1	123.934149730362	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACGAGGCCGTCAAAAGA	-817847	True	NA	NA	False	AAAAAG	-4	NA	821952	750184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_750216_812487_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484
WTC11_00048557	chr19	-	2991	8	NNC	ENSG00000129951.19	novel	2306	8	NA	NA	-324	62303	intron_retention	FALSE	non_canonical	0	0	junction_1	123.934149730362	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACGAGGCCGTCAAAAGA	NA	False	NA	NA	False	AAAAAG	-4	NA	822279	750184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_750217_812487_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484
WTC11_00048558	chr19	-	2661	9	NNC	ENSG00000129951.19	novel	2306	8	NA	NA	-324	62303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.481170064575	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACGAGGCCGTCAAAAGA	NA	False	NA	NA	False	AAAAAG	-4	NA	822279	750184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_750216_812487_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
WTC11_00048559	chr19	-	1264	9	NNC	ENSG00000099817.12	novel	2854	8	NA	NA	0	42336	intron_retention	FALSE	non_canonical	0	0	junction_1	1151.96244920353	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACGTGGTAGTTCACGC	-1056013	True	NA	NA	False	AAAAAG	-1	NA	1095349	1044237	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1044264_1088163_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
WTC11_00048560	chr19	-	756	2	FSM	ENSG00000099817.12	ENST00000586215.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	3102	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGGGTCCGGGTCTCC	-1089915	False	201	NA	False	NA	NA	NA	1089930	1088423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471
WTC11_00048562	chr19	-	4545	29	FSM	ENSG00000064932.16	ENST00000438103.6	4537	29	0	-8	0	8	multi-exon	TRUE	canonical	0	0	junction_28	15.0815808731264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTCAGCCTGTGGG	-1132178	True	NA	2	True	AATATA	-28	NA	1132221	1107628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1132089
WTC11_00048563	chr19	-	6337	32	NIC	ENSG00000064932.16	novel	4906	32	NA	NA	-1468	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	14.3521925795967	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTCAGCCTGTGGG	NA	False	NA	2	True	AATATA	-28	NA	1156604	1107628	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1147308_1147421_1149368_1149443_1154183_1154403_1155085
WTC11_00048565	chr19	-	1286	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	70	0	-70	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTGTGAGCCTCTGCC	-1270030	False	NA	-73	True	NA	NA	NA	1270260	1267540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1268391_1269824
WTC11_00048566	chr19	-	3571	3	FSM	ENSG00000248015.7	ENST00000501448.5	3571	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAATAATAAAT	-1392361	False	NA	NA	False	NA	NA	NA	1396467	1392169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1393607_1393887_1394358_1394803
WTC11_00048568	chr19	-	860	3	FSM	ENSG00000119559.17	ENST00000588427.5	853	3	0	-7	0	7	multi-exon	FALSE	canonical	2	14	junction_1	170	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCACCAGGGCAGTCA	-1472679	True	NA	NA	False	NA	NA	NA	1479201	1461135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1461825_1478773_1478906_1479162
WTC11_00048570	chr19	-	2774	14	NIC	ENSG00000115257.15	novel	2661	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_8	6.08324889839001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTGTGGCCTCCTCT	-1489525	True	NA	-3	True	AATAAA	-17	NA	1490335	1481427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1482208_1482352_1482476_1482895_1483021_1483283_1483768_1483837_1483942_1484026_1484128_1486852_1487066_1487140_1487314_1487602_1487692_1487784_1487862_1487963_1488093_1488187_1488281_1489792_1489898_1490157
WTC11_00048571	chr19	-	2591	15	FSM	ENSG00000115257.15	ENST00000300954.9	2661	15	70	0	-3	0	multi-exon	FALSE	canonical	2	5	junction_4	6.70211663185137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTGTGGCCTCCTCT	-1489528	True	NA	-3	True	AATAAA	-17	NA	1490338	1481427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1482208_1482352_1482476_1482895_1483021_1483283_1483464_1483649_1483768_1483837_1483942_1484026_1484128_1486852_1487066_1487140_1487314_1487602_1487692_1487784_1487862_1487963_1488093_1488187_1488281_1489792_1489898_1490157
WTC11_00048573	chr19	-	467	2	FSM	ENSG00000185761.11	ENST00000590682.2	484	2	17	0	17	0	multi-exon	FALSE	canonical	3	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCGACTACTCCACTAT	-1507378	False	NA	NA	False	NA	NA	NA	1507405	1506625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1506929_1507241
WTC11_00048574	chr19	-	2590	6	NIC	ENSG00000071655.18	novel	5518	7	NA	NA	56	-4	intron_retention	FALSE	canonical	3	511	junction_5	69.4100857224654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTTTGAGCTTCTGTC	-1589002	True	NA	-10	True	NA	NA	NA	1592745	1576643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
WTC11_00048578	chr19	-	4703	19	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	7	0	intron_retention	FALSE	canonical	3	213	junction_5	240.839273283149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTCCCCGGGTTCTT	-1642906	True	NA	-5	True	AATAAA	-22	NA	1652584	1609289	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00048579	chr19	-	2600	20	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_1	243.566335023514	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCAGTCCCCGGGTTC	-1642906	True	NA	-7	True	AATAAA	-20	NA	1652584	1609291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00048581	chr19	-	2655	20	NIC	ENSG00000071564.17	novel	4392	20	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	215.521900860893	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGTAAACCTGAGCCC	-1642864	True	NA	-15	True	ATTAAA	-17	NA	1652542	1610964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
WTC11_00048583	chr19	-	2720	7	ISM	ENSG00000130270.16	ENST00000531925.5	5237	29	22205	0	746	0	intron_retention	FALSE	canonical	2	17	junction_2	7.91622805802528	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGGCTCCCTCTTTCC	-1789922	False	NA	-24	True	AATAAA	-26	NA	1790071	1782076	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360
WTC11_00048584	chr19	-	2651	8	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	0	212	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	9.66373401445015	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCCAAGAAAGTTTATAA	-1790668	True	NA	-41	True	ATTAAA	-34	NA	1790817	1781862	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
WTC11_00048585	chr19	-	2604	9	ISM	ENSG00000130270.16	ENST00000310127.10	5095	29	21385	9	-74	-7	3prime_fragment	FALSE	canonical	2	7	junction_7	9.98044963916957	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGCTAATTCAGGCTCCC	-1790742	True	NA	-31	True	AATAAA	-19	NA	1790891	1782083	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1789889_1789990_1790756
WTC11_00048586	chr19	-	2190	6	FSM	ENSG00000130270.16	ENST00000533107.3	2187	6	0	-3	0	0	multi-exon	FALSE	canonical	2	10	junction_2	3.9293765408777	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	-1806080	False	NA	-5	True	AATAAA	-16	NA	1806160	1798760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887
WTC11_00048587	chr19	-	2870	14	NIC	ENSG00000130270.16	novel	2759	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.68749686590981	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	-1812201	True	NA	-5	True	AATAAA	-16	NA	1812281	1798760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887_1805959_1806096_1806170_1806627_1806690_1807167_1807267_1808221_1808336_1809642_1809735_1810621_1810684_1811600_1811885_1812185
WTC11_00048588	chr19	-	1679	5	FSM	ENSG00000129968.17	ENST00000677868.1	1679	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	222.253233947225	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	-1883061	True	NA	NA	False	NA	NA	NA	1885496	1876809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881261_1881805_1885351
WTC11_00048591	chr19	-	606	2	FSM	ENSG00000172081.14	ENST00000591638.1	567	2	-39	0	-39	0	multi-exon	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATCAGCGACGGCTGCA	NA	False	NA	NA	False	NA	NA	NA	2085431	2078330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2078680_2085174
WTC11_00048594	chr19	-	2154	2	Genic_Genomic	ENSG00000220008.3	novel	2241	1	NA	NA	-16166	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCCTGCTATGGT	-2308114	True	NA	-1	True	NA	NA	NA	2308190	2289783	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_2291823_2308075
WTC11_00048595	chr19	-	513	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	9590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1764.86288419242	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTGACCCAGGCTCA	-2301236	True	NA	NA	False	NA	NA	NA	2328586	2311929	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2311953_2321521_2321823_2324124_2324197_2328386_2328478_2328560
WTC11_00048596	chr19	-	710	2	FSM	ENSG00000130332.15	ENST00000591515.6	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	4594	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2297182	False	NA	-15	True	AATAAA	-15	NA	2324532	2321520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124
WTC11_00048597	chr19	-	769	5	FSM	ENSG00000176619.13	ENST00000532465.1	769	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	582.91744698542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCGCGGACTCCGTTTCC	-2433768	False	NA	NA	False	NA	NA	NA	2433899	2427637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2427994_2431547_2431659_2431782_2431903_2432415_2432524_2433825
WTC11_00048598	chr19	-	4627	12	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_8	372.204511454533	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-2434832	True	NA	-7	True	AATAAA	-14	NA	2456955	2428165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435169_2438162_2438289_2438374_2438532_2444403_2444541_2456669
WTC11_00048599	chr19	-	2168	16	ISM	ENSG00000065717.15	ENST00000455444.6	2253	18	700	-1	-75	1	3prime_fragment	FALSE	canonical	3	6	junction_12	24.912290585617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCGGGCTGGGGA	-3028420	False	NA	-6	True	AATAAA	-21	NA	3028431	2997637	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019698_3019774_3025019_3025083_3027828_3027874_3028318
WTC11_00048600	chr19	-	3275	2	FSM	ENSG00000104964.15	ENST00000592414.1	3274	2	0	-1	0	1	multi-exon	FALSE	canonical	3	2353	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTCCCTGCCTCTG	-3056739	False	NA	-9	True	AATAAA	-17	NA	3056768	3052908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3055727_3056311
WTC11_00048603	chr19	-	741	4	NNC	ENSG00000095932.7	novel	1312	4	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	9.84321537348893	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	-3478950	True	NA	-118	True	NA	NA	NA	3479204	3474507	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3474997_3478418_3478479_3478817_3478930_3479124
WTC11_00048604	chr19	-	1783	1	FSM	ENSG00000161091.14	ENST00000585788.1	1769	1	0	-14	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	-3540031	False	NA	-47	True	AATAAA	-35	NA	3540043	3538260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538300_3540000
WTC11_00048605	chr19	-	1803	6	NNC	ENSG00000161091.14	novel	1014	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	84.6276550543615	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAACGAGACTCAGC	-3546322	False	36	NA	False	NA	NA	NA	3546358	3538649	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3538757_3542775_3542978_3543568_3544733_3544808_3544940_3546073_3546169_3546254
WTC11_00048606	chr19	-	1895	11	NIC	ENSG00000161091.14	novel	777	7	NA	NA	5	-12	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	66.8523746773441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCGCCACCGTGCTGGA	-3554191	True	NA	NA	False	NA	NA	NA	3557581	3538661	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3538757_3542775_3542978_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
WTC11_00048607	chr19	-	3030	11	NIC	ENSG00000105298.14	novel	2810	12	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	38.1818019480485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	-3623763	True	NA	-20	True	AATAAA	-19	NA	3626776	3610644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3611361_3611899_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
WTC11_00048610	chr19	-	4947	16	NIC	ENSG00000186111.11	novel	5069	18	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	47.6414385453112	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGTTTGCCTTTCTG	-3696454	True	NA	32	True	AATAAA	-15	NA	3700463	3630182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3633170_3638883_3639017_3641704_3641810_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
WTC11_00048611	chr19	-	1779	8	FSM	ENSG00000011132.12	ENST00000588984.5	1779	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	14.4165437846204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGTGCTGTGAAAATACT	-3752635	False	NA	50	True	NA	NA	NA	3754800	3750818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194
WTC11_00048615	chr19	-	577	4	FSM	ENSG00000011132.12	ENST00000592826.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	9.03081145609604	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCCCTCAGCATCGGG	-3751976	False	NA	NA	False	NA	NA	NA	3754141	3752599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3752721_3752819_3752991_3753764_3753927_3754018
WTC11_00048617	chr19	-	454	3	FSM	ENSG00000105278.12	ENST00000592807.5	514	3	0	60	0	-60	multi-exon	FALSE	canonical	2	4	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAACTTACTTTTTTTT	-3866816	True	NA	NA	False	GGGGCT	-39	NA	3869029	3833600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3833779_3834772_3834984_3868964
WTC11_00048619	chr19	-	2151	8	NIC	ENSG00000167657.14	novel	2286	9	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	100.255388170127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-3960452	True	NA	-1	True	AATAAA	-18	NA	3971092	3958452	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3959638_3960058_3960105_3961008_3961162_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3971021
WTC11_00048623	chr19	-	1217	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	-5	0	5	multi-exon	TRUE	canonical	2	4	junction_3	1.4790199457749	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTTTGTGGCGATTT	-4302324	True	NA	NA	False	AATAAA	-22	NA	4302393	4292226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
WTC11_00048624	chr19	-	1240	5	FSM	ENSG00000167664.8	ENST00000301272.6	1262	5	27	-5	-11	5	multi-exon	FALSE	canonical	1	2	junction_1	2.38484800354236	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTTTGTGGCGATTT	-4302335	True	NA	NA	False	AATAAA	-22	NA	4302404	4292226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4292886_4294566_4294681_4294774_4294817_4297985_4298346_4302339
WTC11_00048625	chr19	-	221	1	FSM	ENSG00000269318.1	ENST00000593524.1	1812	1	1615	-24	1615	24	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTTAATAGATGAGGCC	-4356776	False	NA	NA	False	AAAAAG	-24	NA	4356833	4356612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4356600_4356800
WTC11_00048626	chr19	-	4606	1	FSM	ENSG00000167671.12	ENST00000588238.1	4598	1	0	-8	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCCGTTGAAACCGTG	-4449580	False	NA	NA	False	AATAAA	-25	NA	4449604	4444998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4445000_4449600
WTC11_00048627	chr19	-	7122	34	NNC	ENSG00000105426.18	novel	7356	38	NA	NA	20	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_23	39.0450047598181	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTGTGGAGTCTTTGT	-5327355	True	NA	-5	True	ATTAAA	-20	NA	5340783	5205502	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5216719_5216768_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231425_5231556_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
WTC11_00048628	chr19	-	7273	32	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	-38	5	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	27.8075742606993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTGTGGAGTCTTTGT	-5327422	True	NA	-5	True	ATTAAA	-20	NA	5340850	5205502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
WTC11_00048629	chr19	-	2891	20	NNC	ENSG00000130254.12	novel	3167	21	NA	NA	-224	6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_14	84.2222689181279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGCGTGCACATGCGTG	-5622891	False	NA	-11	True	AATAAA	-21	NA	5623000	5586992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5587400_5587695_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
WTC11_00048635	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	279.43077059543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	-5674206	True	NA	NA	False	AATAAA	-2	NA	5680488	5678914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
WTC11_00048636	chr19	-	2626	18	FSM	ENSG00000196365.12	ENST00000590729.5	2626	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_14	239.948956509721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGCAGTGGAGCCACC	-5719839	False	NA	NA	False	NA	NA	NA	5719849	5691954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711818_5712003_5713133_5713254_5714182_5714272_5719703
WTC11_00048637	chr19	-	2041	12	NIC	ENSG00000141994.16	novel	2038	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	52.6857203041483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787547	True	NA	-5	True	AATAAA	-17	NA	5791208	5785139	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5789206_5789720_5790046_5790336_5791043
WTC11_00048639	chr19	-	768	4	FSM	ENSG00000174886.14	ENST00000418389.6	2406	4	0	1638	0	-1638	multi-exon	FALSE	canonical	2	4	junction_1	1350.87782159931	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTCTGTCCTCAG	-5871359	True	NA	NA	False	AATAGA	-44	NA	5903786	5892913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5893291_5896452_5896576_5896904_5896998_5903611
WTC11_00048640	chr19	-	4098	18	FSM	ENSG00000087903.13	ENST00000303657.10	3959	18	-138	-1	-37	1	multi-exon	FALSE	canonical	2	7	junction_7	7.2522517681988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCCTGTCTTTCCGA	-6110364	True	NA	NA	False	AATACA	-19	NA	6110638	5993162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5994951_5995600_5995644_5997059_5997214_6001814_6002024_6002720_6002871_6004200_6004299_6007011_6007167_6007689_6007803_6008105_6008225_6010135_6010252_6012985_6013106_6016089_6016272_6026162_6026238_6039979_6040242_6042043_6042124_6044192_6044283_6047406_6047505_6110392
WTC11_00048642	chr19	-	4398	11	NIC	ENSG00000130382.9	novel	4532	12	NA	NA	9	1	intron_retention	FALSE	canonical	3	8	junction_7	19.2044265730586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCATGCATCTGCCTGGTT	-6276063	True	NA	-5	True	AATAAA	-18	NA	6279966	6210379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6217953_6218042_6222120_6222685_6230569_6230714_6262227_6262311_6270578_6270760_6279772
WTC11_00048644	chr19	-	570	3	ISM	ENSG00000125648.15	ENST00000264088.8	2056	13	20930	0	5458	0	3prime_fragment	FALSE	canonical	3	7	junction_2	13	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6438810	False	NA	-4	True	AATACA	-17	NA	6438821	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6436465_6438446_6438535_6438723
WTC11_00048646	chr19	-	2423	12	FSM	ENSG00000205744.10	ENST00000590818.5	2422	12	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_11	10.7641891749932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTAATTTTATATAAATA	-6475955	True	NA	-5	True	AATAAA	-18	NA	6476215	6467206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475752_6475836
WTC11_00048648	chr19	-	1588	3	NIC	ENSG00000205744.10	novel	2395	21	NA	NA	251	0	intron_retention	FALSE	canonical	3	31	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTCCAAGAGAGACCCCA	-6469140	False	NA	NA	False	NA	NA	NA	6469400	6467497	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6468119_6468233_6468646_6468845
WTC11_00048650	chr19	-	3540	29	ISM	ENSG00000125730.17	ENST00000245907.11	5231	41	9825	131	132	0	3prime_fragment	TRUE	canonical	1	3	junction_12	4.52022100778089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	-6710804	False	NA	-1	True	GATAAA	-18	NA	6710825	6677834	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6678024_6678151_6678288_6678371_6678456_6679124_6679209_6679406_6679497_6680157_6680264_6681940_6682031_6682141_6682230_6684387_6684440_6684559_6684651_6684774_6684835_6684987_6685147_6686123_6686288_6686745_6686903_6690628_6690728_6692923_6693084_6693411_6693488_6694430_6694635_6696378_6696466_6696592_6696660_6697343_6697557_6697651_6697795_6702126_6702213_6702470_6702580_6707075_6707274_6707465_6707538_6707799_6707930_6709683_6709843_6710638
WTC11_00048651	chr19	-	1990	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	43.8805899326742	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765412	True	NA	-6	True	AATAAA	-17	NA	6767509	6752164	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
WTC11_00048654	chr19	-	806	5	FSM	ENSG00000104883.8	ENST00000593547.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	23.3291662945764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTAAACATTGTGGT	-7488658	False	NA	-31	True	NA	NA	NA	7488972	7476900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7477254_7478313_7478377_7482032_7482212_7485837_7486027_7488950
WTC11_00048655	chr19	-	2081	7	NIC	ENSG00000183248.12	novel	4467	6	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	43.2152236550449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCTGTCACAGAGAGGAC	-7872502	True	NA	1	True	AATAAA	-26	NA	7874387	7868714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_7869545_7869714_7869918_7872304_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
WTC11_00048656	chr19	-	2254	7	NNC	ENSG00000183248.12	novel	4467	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	42.1056871323683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCTGTCACAGAGAGGAC	-7872505	True	NA	1	True	AATAAA	-26	NA	7874390	7868714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_7869545_7869714_7870088_7872304_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
WTC11_00048659	chr19	-	1271	6	NNC	ENSG00000167775.11	novel	1253	5	NA	NA	0	26805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	728.612215104853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCCAGGCATGGCACAG	-8297523	True	NA	NA	False	NA	NA	NA	8308335	8275321	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275363_8302126_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
WTC11_00048660	chr19	-	1285	6	NNC	ENSG00000167775.11	novel	1253	5	NA	NA	0	26805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	728.612215104853	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCCAGGCATGGCACAG	-8297538	True	NA	NA	False	NA	NA	NA	8308350	8275321	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275362_8302126_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
WTC11_00048661	chr19	-	590	2	FSM	ENSG00000186994.12	ENST00000593331.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCTCCTCCAGCGAGGA	-8334431	False	NA	NA	False	NA	NA	NA	8334782	8334112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8334420_8334499
WTC11_00048662	chr19	-	815	3	NNC	ENSG00000269386.6	novel	1020	3	NA	NA	-2496	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	13	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGTTCTGAGGTTGCT	-8380278	True	NA	NA	False	AAAAAG	-26	NA	8380323	8374375	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8374609_8376961_8377068_8379847
WTC11_00048664	chr19	-	2436	13	ISM	ENSG00000142303.14	ENST00000593913.5	3333	22	13605	-435	0	-11	3prime_fragment	FALSE	canonical	1	2	junction_10	5.67890834580027	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCTACGAATTGCGGT	-8592072	True	NA	-13	True	AATAAA	-15	NA	8592174	8580252	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957
WTC11_00048665	chr19	-	6995	10	FSM	ENSG00000167785.9	ENST00000601372.6	7008	10	5	8	5	-8	multi-exon	FALSE	canonical	1	4	junction_9	2.29868454061969	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACACATTGCATTGAT	-8832108	True	NA	NA	False	AATAAA	-8	NA	8832299	8806177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8812064_8812560_8812644_8813126_8813223_8821179_8821307_8822002_8822092_8822628_8822725_8824081_8824418_8825001_8825109_8831317_8831402_8832208
WTC11_00048667	chr19	-	3476	11	NNC	ENSG00000174652.20	novel	3544	11	NA	NA	19	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	23.0826774876746	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGATTATTTTTTCCG	-9433689	True	NA	-23	True	AATAAA	-5	NA	9435552	9412439	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419050_9419144_9419216_9419290_9420064_9420219_9434074_9434236_9434797_9434860_9435107_9435194_9435283
WTC11_00048668	chr19	-	3503	9	FSM	ENSG00000174652.20	ENST00000588221.5	3503	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	19.9687255477159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433663	True	NA	-6	True	AATAAA	-16	NA	9435526	9412597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418761_9419300_9420064_9420219_9434797_9434860_9435107_9435194_9435283
WTC11_00048669	chr19	-	2809	10	FSM	ENSG00000198028.4	ENST00000301480.5	2815	10	6	0	6	0	multi-exon	FALSE	canonical	2	11	junction_5	7.25888132047159	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTGATGAGTC	-9498014	True	NA	NA	False	AAAACA	-20	NA	9498610	9466354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9468335_9469104_9469188_9469629_9469711_9470391_9470519_9471295_9471379_9473178_9473260_9474198_9474326_9475283_9475370_9498127_9498216_9498537
WTC11_00048670	chr19	-	3893	2	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	2357	0	at_least_one_novel_splicesite	FALSE	canonical	3	393	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9565375	False	NA	-12	True	AATAAA	-17	NA	9565386	9560328	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9561627_9562791
WTC11_00048671	chr19	-	1028	5	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	9	2228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.4913450014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTCTGGTTAATGTTG	-9576631	True	NA	NA	False	NA	NA	NA	9584488	9564431	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9564496_9566335_9567110_9568094_9568176_9569001_9569083_9584460
WTC11_00048672	chr19	-	4631	7	NIC	ENSG00000171469.11	novel	4529	6	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_4	43.4680597936257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	-9618612	True	NA	-10	True	AATAAA	-14	NA	9621186	9607328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617769_9618090_9618180_9619431_9619583_9621161
WTC11_00048673	chr19	-	4731	6	NIC	ENSG00000171469.11	novel	4529	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	47.356520142426	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	-9618614	True	NA	-10	True	AATAAA	-14	NA	9621188	9607328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618180_9619431_9619583_9620915
WTC11_00048676	chr19	-	650	1	FSM	ENSG00000267370.1	ENST00000588113.1	712	1	80	-18	80	18	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGACTCATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	9756783	9756133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9756100_9756800
WTC11_00048678	chr19	-	810	5	FSM	ENSG00000196605.7	ENST00000586814.5	482	5	-53	-275	-53	0	multi-exon	FALSE	canonical	1	3	junction_3	6.41774882649672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGGAGAACTTTTCT	-9785647	True	NA	-3	True	AATAAA	-34	NA	9786142	9758473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9758765_9762081_9762169_9763281_9763409_9764935_9765036_9785937
WTC11_00048679	chr19	-	683	6	FSM	ENSG00000196605.7	ENST00000589412.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	10.8921990433521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAACCAGTTTCCAA	-9785658	False	NA	-76	True	AAGAAA	-45	NA	9785996	9758546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9785925
WTC11_00048680	chr19	-	2029	9	NIC	ENSG00000080573.7	novel	6207	67	NA	NA	159	0	intron_retention	FALSE	canonical	0	0	junction_8	7.22841614740048	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	NA	False	NA	-1	True	AATAAA	-14	NA	9968728	9959560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025_9968080_9968384_9968493_9968674
WTC11_00048685	chr19	-	1449	5	ISM	ENSG00000076662.10	ENST00000589261.5	2024	7	3576	-3	-270	0	3prime_fragment	TRUE	canonical	3	30	junction_4	58.8621270427768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10335521	False	NA	0	True	AATAAA	-18	NA	10336043	10333775	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670
WTC11_00048686	chr19	-	1667	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-183	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	51.6155015475002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339322	True	NA	0	True	AATAAA	-18	NA	10339844	10333775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
WTC11_00048687	chr19	-	4312	24	NNC	ENSG00000105397.14	novel	4243	25	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	23.1682430456499	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTTTTGGAGCCCTC	-10378975	True	NA	-5	True	AATAAA	-23	NA	10380525	10350525	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353813_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
WTC11_00048688	chr19	-	952	4	NIC	ENSG00000105397.14	novel	628	6	NA	NA	-165	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	58.1262992686328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATTTTTGGAGCCC	-10354154	True	NA	-7	True	AATAAA	-21	NA	10354268	10350527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10350969_10351051_10351163_10352925_10353099_10354041
WTC11_00048689	chr19	-	3680	21	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	8.43134034421574	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATTTTTGGAGCCC	-10378975	True	NA	-7	True	AATAAA	-21	NA	10380525	10350527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
WTC11_00048690	chr19	-	950	4	NIC	ENSG00000105397.14	novel	628	6	NA	NA	197	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	53.5059705910367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGATTTTTGGA	NA	False	NA	-11	True	AATAAA	-17	NA	10354325	10350531	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10350969_10351051_10351163_10352433_10352552_10354041
WTC11_00048692	chr19	-	1924	10	NIC	ENSG00000105401.9	novel	1618	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	575.705578903181	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-10419906	True	NA	-28	True	AATAAA	-16	NA	10420162	10391132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377_10403596_10419460_10419598_10420046
WTC11_00048693	chr19	-	2191	2	FSM	ENSG00000180739.15	ENST00000439028.3	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTCTTTCTTTCTT	-10517826	True	NA	-6	True	AATAAA	-18	NA	10517931	10512946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10515030_10517823
WTC11_00048695	chr19	-	1650	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-39	78	multi-exon	FALSE	canonical	1	6	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACTTTGGGAGGCCGA	-10651524	True	NA	74	True	NA	NA	NA	10653883	10651783	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_10653269_10653718
WTC11_00048697	chr19	-	5237	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.1982905514602	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	-11194645	True	NA	NA	False	AATAAA	-21	NA	11197530	11164266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
WTC11_00048698	chr19	-	5376	13	NIC	ENSG00000197256.11	novel	3048	13	NA	NA	-60	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.1982905514602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	-11194723	True	NA	NA	False	AATAAA	-21	NA	11197608	11164266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195882_11197484
WTC11_00048700	chr19	-	1253	7	FSM	ENSG00000130158.14	ENST00000586702.1	1249	7	0	-4	0	4	multi-exon	FALSE	canonical	3	13	junction_6	55.6399636552322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTGGTGCGGTCACT	NA	False	NA	-1	True	TTTAAA	-22	NA	11203313	11199290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202716_11203281
WTC11_00048701	chr19	-	4399	27	NIC	ENSG00000130158.14	novel	4009	30	NA	NA	-732	4	combination_of_known_junctions	TRUE	canonical	3	67	junction_26	24.3106132616963	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTGGTGCGGTCACT	NA	False	NA	-1	True	TTTAAA	-22	NA	11230064	11199290	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297
WTC11_00048703	chr19	-	6576	49	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	36.9084770355447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-11260636	True	NA	-5	True	TTTAAA	-18	NA	11262481	11199294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202716_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297_11229391_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
WTC11_00048704	chr19	-	688	4	FSM	ENSG00000105518.14	ENST00000587948.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	294.473918860209	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	11346406	11342778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346333
WTC11_00048705	chr19	-	680	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	2	5	2	-5	multi-exon	FALSE	canonical	1	1	junction_1	1	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-11374553	False	434	NA	False	AATATA	-16	NA	11374933	11368122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11368296_11371687_11371872_11374610
WTC11_00048706	chr19	-	2451	8	NIC	ENSG00000187266.14	novel	1931	9	NA	NA	31	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	26.9360542843261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATGTTCTAAGAAAG	-11383873	False	NA	NA	False	AATAAA	-14	NA	11384253	11377209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381314_11381691_11381850_11381929_11382106_11383096_11383233_11384092
WTC11_00048708	chr19	-	2399	18	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_17	30.3761880881747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	-11418549	False	1554	-1	True	NA	NA	NA	11418573	11394055	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418506
WTC11_00048709	chr19	-	2522	19	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	46.079942611847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	-11417772	True	NA	-1	True	NA	NA	NA	11419326	11394055	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416663_11416835_11417060_11418670_11418785_11419245
WTC11_00048711	chr19	-	618	3	ISM	ENSG00000198003.12	ENST00000356392.9	2123	13	13255	0	13033	0	3prime_fragment	FALSE	canonical	3	109	junction_2	15.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11420786	True	NA	-8	True	AATAAA	-15	NA	11421866	11420604	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11420948_11421127_11421213_11421676
WTC11_00048713	chr19	-	701	4	NNC	ENSG00000198003.12	novel	1943	11	NA	NA	12879	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	60.3618717035477	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11421996	False	NA	-8	True	AATAAA	-15	NA	11422020	11420604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11420948_11421127_11421213_11421636_11421833_11421943
WTC11_00048714	chr19	-	2104	13	FSM	ENSG00000198003.12	ENST00000356392.9	2123	13	19	0	19	0	multi-exon	FALSE	canonical	0	0	junction_5	46.118431480507	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11435081	True	NA	-8	True	AATAAA	-15	NA	11435102	11420604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11420948_11421127_11421213_11421676_11421833_11422470_11422628_11422700_11422862_11423876_11424030_11426143_11426267_11426445_11426572_11426682_11426785_11426872_11427041_11430698_11430777_11430898_11431021_11434772
WTC11_00048717	chr19	-	3082	1	FSM	ENSG00000242615.1	ENST00000472362.1	1517	1	-957	-608	-957	608	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCAGAAAGAGTGTGGG	-12144252	False	NA	NA	False	NA	NA	NA	12144279	12141197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12141200_12144300
WTC11_00048722	chr19	-	3685	22	FSM	ENSG00000104774.13	ENST00000466794.5	3685	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	33.1287600013798	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTCCTCTTGGGGCTGC	-12645718	False	NA	-68	True	NA	NA	NA	12666683	12646560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
WTC11_00048726	chr19	-	995	6	FSM	ENSG00000132026.15	ENST00000393233.6	1000	6	1	4	1	0	multi-exon	FALSE	canonical	2	3	junction_5	6.11882341631134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12830590	False	NA	-4	True	AATAAA	-17	NA	12830674	12825481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12830611
WTC11_00048727	chr19	-	1481	4	FSM	ENSG00000104903.5	ENST00000264824.5	1481	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGGTGCCTCATTTT	-13102813	True	NA	-3	True	NA	NA	NA	13102858	13099032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13099735_13100656_13100749_13100836_13101196_13102530
WTC11_00048731	chr19	-	1034	10	FSM	ENSG00000141837.22	ENST00000636768.1	1034	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	5.12317417039933	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATGACCACCCAATC	NA	False	NA	NA	False	NA	NA	NA	13231736	13208995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13209010_13209311_13209499_13212102_13212217_13212383_13212523_13212630_13212741_13214232_13214334_13214500_13214609_13224666_13224773_13230081_13230210_13231709
WTC11_00048736	chr19	-	210	1	FSM	ENSG00000141837.22	ENST00000637625.1	1890	1	-194	1874	-194	-1874	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATCACCCAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	13317321	13317111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13317100_13317300
WTC11_00048737	chr19	-	913	8	FSM	ENSG00000141837.22	ENST00000593160.2	1651	8	0	738	0	-738	multi-exon	FALSE	canonical	1	5	junction_4	3.8703477668983	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCTTTCATCCTGG	-13505839	False	NA	NA	False	NA	NA	NA	13505939	13334377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13334494_13335805_13335910_13359605_13359800_13365316_13365470_13371687_13371780_13452875_13453016_13455106_13455213_13505931
WTC11_00048746	chr19	-	5332	2	NIC	ENSG00000072071.17	novel	791	5	NA	NA	-300	3	intron_retention	FALSE	canonical	3	172	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGTGGTGTGACTTCTT	-14153137	False	NA	-3	True	AATAAA	-24	NA	14153150	14147739	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14152438_14152516
WTC11_00048747	chr19	-	6457	24	NNC	ENSG00000072071.17	novel	7853	24	NA	NA	-651	1216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	53.3825229997117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGACAAAAA	-14203852	True	NA	6	True	NA	NA	NA	14206838	14149952	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14151616_14152132_14152223_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162584_14163407_14164620_14164706_14170681_14170792_14177530_14177745_14183532_14183698_14205984
WTC11_00048748	chr19	-	2258	5	ISM	ENSG00000072071.17	ENST00000361434.8	7820	23	-639	14719	-621	486	5prime_fragment	FALSE	canonical	3	69	junction_1	25.4460212999989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTTCTAAGCACTTCAC	-14203822	True	NA	NA	False	NA	NA	NA	14206808	14162461	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
WTC11_00048749	chr19	-	2393	6	NNC	ENSG00000072071.17	novel	7853	24	NA	NA	-649	483	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	52.2111099288265	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGCTGTTCTAAGCACTT	-14203850	True	NA	NA	False	NA	NA	NA	14206836	14162464	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14189579_14189690_14205984
WTC11_00048753	chr19	-	1715	7	NIC	ENSG00000123159.16	novel	1921	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	92	junction_4	279.564939782433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGACCTGTGTGGCTTC	-14491755	True	NA	-6	True	CATAAA	-13	NA	14496127	14477765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14492856_14492913_14496036
WTC11_00048756	chr19	-	2061	6	ISM	ENSG00000105143.13	ENST00000594383.2	2420	10	142	11264	0	13	5prime_fragment	FALSE	canonical	3	24	junction_5	12.5219806739988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACATTGTGGAATGGTT	-14979203	True	NA	15	True	AATAAA	-43	NA	14979722	14961296	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
WTC11_00048757	chr19	-	2347	16	NNC	ENSG00000105135.16	novel	2305	16	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_6	125.824463263531	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCAGAACCTGTGCAT	-15123379	True	NA	-11	True	AATAAA	-31	NA	15125695	15114984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116654_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
WTC11_00048758	chr19	-	1674	8	NNC	ENSG00000105131.8	novel	1805	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	71.8663725966747	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15233407	False	NA	-3	True	AATACA	-25	NA	15233434	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15233406
WTC11_00048760	chr19	-	4694	12	NIC	ENSG00000141867.19	novel	4624	12	NA	NA	8	16	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	364.364407547723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGAGTTTTGTGTGGG	-15320631	True	NA	6	True	AATAAA	-39	NA	15332531	15247030	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15249291_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
WTC11_00048761	chr19	-	1933	14	FSM	ENSG00000011243.19	ENST00000595465.6	1933	14	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_10	250.696379224378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408830	True	NA	-10	True	AATAAA	-15	NA	15419026	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403657_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00048763	chr19	-	3608	1	FSM	ENSG00000279198.1	ENST00000624324.1	3103	1	-510	5	-510	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACCCAGTCTATGGTG	NA	False	NA	-5	True	AATAAA	-13	NA	16077905	16074297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16074300_16077900
WTC11_00048764	chr19	-	2949	22	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	68.469070429225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468940	True	NA	NA	False	TATAAA	-42	NA	16471960	16355246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16361778_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00048767	chr19	-	1343	5	FSM	ENSG00000127526.15	ENST00000436553.6	1343	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	43.7914089748206	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCCCCAAGCAGTGTA	-16571315	False	NA	NA	False	NA	NA	NA	16572304	16553370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16553910_16555151_16555398_16566531_16566658_16571511_16571583_16571943
WTC11_00048768	chr19	-	1259	5	NIC	ENSG00000214046.9	novel	1281	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	294.432823407989	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	-16651481	True	NA	-20	True	AATAAA	-7	NA	16660132	16630750	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16631725_16647119_16647262_16659394_16659448_16659958_16660001_16660084
WTC11_00048773	chr19	-	4604	12	FSM	ENSG00000130307.12	ENST00000597928.5	3598	12	-23	-983	0	-4	multi-exon	FALSE	canonical	1	7	junction_6	13.8635618477878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGGGAGACTGAAGC	-17263833	True	NA	-16	True	AATAAA	-24	NA	17264737	17249174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258702_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17264151_17264245_17264348_17264670
WTC11_00048779	chr19	-	6416	9	NNC	ENSG00000130477.16	novel	9985	44	NA	NA	-4154	710	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_8	16.855544340068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGAGTTCAGTGTCAC	-17623186	False	NA	NA	False	NA	NA	NA	17623196	17600625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17623117
WTC11_00048783	chr19	-	2520	3	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	13665	-1370	11743	0	3prime_fragment	FALSE	canonical	3	16	junction_1	2	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	-17830763	False	NA	-1	True	AATAAA	-17	NA	17830782	17824781	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_17826911_17830107_17830219_17830502
WTC11_00048786	chr19	-	1924	2	NNC	ENSG00000130522.6	novel	500	2	NA	NA	-29	38442	intron_retention	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGAAAGAAAG	NA	False	NA	NA	False	AAAACA	-3	NA	18281651	18241251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18241284_18279759
WTC11_00048787	chr19	-	576	4	FSM	ENSG00000284797.1	ENST00000596647.1	619	4	-46	89	22	0	multi-exon	FALSE	canonical	2	3	junction_1	3.2659863237109	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCCTCGTGTGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	18255397	18250038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18250178_18250311_18250473_18252063_18252162_18255219
WTC11_00048788	chr19	-	702	3	FSM	ENSG00000105655.19	ENST00000582287.6	696	3	0	-6	0	0	multi-exon	FALSE	canonical	3	969	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18435726	False	NA	-35	True	AATAAA	-27	NA	18435737	18434808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562
WTC11_00048791	chr19	-	1377	9	FSM	ENSG00000051128.19	ENST00000539827.5	1979	9	608	-6	0	4	multi-exon	FALSE	canonical	3	259	junction_4	30.5849227561555	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTATGTGGGTAT	-18936636	False	NA	2	True	NA	NA	NA	18939027	18929196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968
WTC11_00048794	chr19	-	3478	4	ISM	ENSG00000187664.9	ENST00000291481.8	4342	5	1142	888	21	-888	3prime_fragment	FALSE	canonical	3	47	junction_2	12.4988888395018	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGGCAGCCAGTGGGT	-19260593	True	NA	-9	True	AATAAA	-26	NA	19261662	19255643	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445
WTC11_00048797	chr19	-	718	2	FSM	ENSG00000105717.14	ENST00000558276.7	727	2	0	9	0	-3	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCGATGTCTGTTTGC	-19563812	False	NA	-8	True	ATTAAA	-16	NA	19563824	19561715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19562118_19563508
WTC11_00048799	chr19	-	2691	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-423	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	73.0114146326906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19629159	False	NA	-14	True	AGTAAA	-30	NA	19629353	19623654	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628427
WTC11_00048801	chr19	-	732	4	FSM	ENSG00000266904.7	ENST00000589910.5	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.29983164553722	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACTACCATTGCAGTGC	-19776199	True	NA	NA	False	NA	NA	NA	19776380	19758142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19758547_19761256_19761422_19762537_19762647_19776326
WTC11_00048806	chr19	-	3773	1	FSM	ENSG00000197124.12	ENST00000601365.1	3769	1	0	-4	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGCATTGAATTAGG	NA	False	NA	-1	True	AATAAA	-25	NA	20008188	20004415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20004400_20008200
WTC11_00048807	chr19	-	799	5	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3412644248931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-20036930	True	NA	-3	True	AATAAA	-23	NA	20039453	20004417	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20004748_20007140_20007276_20023003_20023100_20024249_20024377_20039342
WTC11_00048809	chr19	-	4757	3	NIC	ENSG00000231205.12	novel	3330	3	NA	NA	0	1406	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	139	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGAGGATATGTTTTT	-20417116	True	NA	-16	True	AATAAA	-23	NA	20424956	20394548	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20399039_20408949_20409046_20424785
WTC11_00048811	chr19	-	3330	3	NNC	ENSG00000188171.17	novel	501	2	NA	NA	0	-2309	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGATGATGTGTGAACT	-20656171	True	NA	-4	True	AATAAA	-20	NA	20661537	20622247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_20624365_20624531_20625651_20661443
WTC11_00048817	chr19	-	5368	5	NIC	ENSG00000197020.12	novel	5691	5	NA	NA	-9	-299	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	21.242645786248	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTGGTATTTTTTAAT	-21766507	True	NA	NA	False	NA	NA	NA	21767558	21723069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21727990_21744016_21744113_21744940_21745068_21765693_21765787_21767426
WTC11_00048818	chr19	-	5154	3	NIC	ENSG00000197020.12	novel	5691	5	NA	NA	12	-299	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	35	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTGGTATTTTTTAAT	-21766516	True	NA	NA	False	NA	NA	NA	21767567	21723069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21727990_21765693_21765787_21767426
WTC11_00048819	chr19	-	5608	7	FSM	ENSG00000198521.12	ENST00000594012.5	5584	7	0	-24	0	20	multi-exon	FALSE	canonical	3	14	junction_6	49.7728172131469	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGTGGCCGCTCTGC	-21849379	True	NA	NA	False	AATAAA	-21	NA	21852017	21804925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851028_21851904
WTC11_00048820	chr19	-	901	1	FSM	ENSG00000270479.1	ENST00000604107.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAAAACTGGAATCTGA	NA	False	NA	NA	False	AATACA	-27	NA	23124088	23123187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23123200_23124100
WTC11_00048821	chr19	-	1236	2	Antisense	novelGene_ENSG00000183850.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGCAGGGGACAAATC	NA	False	NA	NA	False	GGGGCT	-42	NA	23141948	23134353	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_-_23135232_23141590
WTC11_00048823	chr19	-	2887	1	FSM	ENSG00000269837.1	ENST00000593576.1	2887	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGACCCTTAGTCGAC	NA	False	NA	-7	True	AATAAA	-20	NA	23257939	23255052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23255100_23257900
WTC11_00048824	chr19	-	552	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	27	0	8	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23272016	True	NA	2	True	AATAAA	-19	NA	23274220	23269885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23270293_23274075
WTC11_00048829	chr19	-	4197	1	FSM	ENSG00000197372.10	ENST00000600299.1	4227	1	137	-107	137	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	-23656975	False	NA	96	True	CATAAA	-22	NA	23656997	23652800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23652800_23657000
WTC11_00048832	chr19	-	3666	1	FSM	ENSG00000261770.1	ENST00000562493.1	3666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTATATATATATATA	NA	False	NA	NA	False	AATAAA	-13	NA	27760849	27757183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27757200_27760800
WTC11_00048837	chr19	-	2760	2	NIC	ENSG00000121297.8	novel	2637	7	NA	NA	-72	34681	intron_retention	FALSE	canonical	2	15	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAACAAATGCTTTCGT	-31349302	False	NA	NA	False	TATAAA	-18	NA	31349327	31240263	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_31242876_31349179
WTC11_00048838	chr19	-	5066	2	FSM	ENSG00000121297.8	ENST00000240587.5	5065	2	0	-1	0	1	multi-exon	FALSE	canonical	3	56	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGCGTTCACAATT	-31348023	True	NA	1	True	ATTAAA	-20	NA	31349436	31274943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_31279753_31349179
WTC11_00048844	chr19	-	632	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	-4	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	-34850454	False	NA	1	True	AATAAA	-20	NA	34850796	34849045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34850668
WTC11_00048845	chr19	-	626	3	NNC	ENSG00000227392.2	novel	3218	5	NA	NA	15268	-27011	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCGGTTCGTGTATTGTC	-35090905	False	NA	3	True	TATAAA	-23	NA	35091007	35086069	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35086451_35086955_35087101_35090907
WTC11_00048846	chr19	-	2673	9	FSM	ENSG00000153902.14	ENST00000310123.8	2673	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7.04893608993584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35135037	False	NA	-6	True	AATAAA	-17	NA	35135059	35124512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
WTC11_00048853	chr19	-	609	2	FSM	ENSG00000161249.21	ENST00000472365.6	606	2	0	-3	0	3	multi-exon	FALSE	canonical	3	228	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35497913	False	NA	1	True	AATAAA	-24	NA	35497933	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646
WTC11_00048854	chr19	-	879	12	NIC	ENSG00000161249.21	novel	593	12	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	388.851646911499	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481308	True	NA	1	True	AATAAA	-24	NA	35510430	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
WTC11_00048855	chr19	-	938	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	-3	0	3	multi-exon	FALSE	canonical	3	76	junction_5	410.395566293464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481309	True	NA	1	True	AATAAA	-24	NA	35510431	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
WTC11_00048856	chr19	-	695	8	FSM	ENSG00000161249.21	ENST00000488762.5	691	8	0	-4	0	3	multi-exon	FALSE	canonical	3	33	junction_5	349.281069206624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481320	True	NA	1	True	AATAAA	-24	NA	35510442	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35505717_35505766_35510183_35510253_35510378
WTC11_00048857	chr19	-	1583	12	FSM	ENSG00000161249.21	ENST00000490622.5	1579	12	0	-4	0	3	multi-exon	FALSE	canonical	3	42	junction_2	415.887520553414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-35481348	True	NA	1	True	AATAAA	-24	NA	35510470	35497216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
WTC11_00048858	chr19	-	977	14	NIC	ENSG00000161249.21	novel	842	16	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_11	455.875346296492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCAAATTTTATTC	-35481290	True	NA	-1	True	AATAAA	-22	NA	35510412	35497218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
WTC11_00048859	chr19	-	969	13	NIC	ENSG00000161249.21	novel	842	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	406.300680599424	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCAAATTTTATTC	-35481324	True	NA	-1	True	AATAAA	-22	NA	35510446	35497218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
WTC11_00048860	chr19	-	984	13	NIC	ENSG00000161249.21	novel	666	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	407.077183508648	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCAAATTTTATTC	-35481347	True	NA	-1	True	AATAAA	-22	NA	35510469	35497218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
WTC11_00048861	chr19	-	905	3	ISM	ENSG00000161249.21	ENST00000486756.6	811	4	134	-118	0	0	intron_retention	FALSE	canonical	3	42	junction_2	93	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35499135	False	NA	-2	True	AATAAA	-21	NA	35499148	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35497539_35497646_35497682_35498597
WTC11_00048862	chr19	-	841	12	FSM	ENSG00000161249.21	ENST00000480502.5	820	12	0	-21	0	0	multi-exon	FALSE	canonical	3	55	junction_7	472.875728437667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-35481337	True	NA	-67	True	NA	NA	NA	35510459	35497284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
WTC11_00048863	chr19	-	772	4	FSM	ENSG00000161249.21	ENST00000469960.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	163.225814951761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGTCACTGTGACAG	-35471307	False	NA	-93	True	NA	NA	NA	35500429	35497310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957
WTC11_00048866	chr19	-	505	8	FSM	ENSG00000161249.21	ENST00000493517.5	505	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	465.862334049142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGGCTCTGCATGAGGG	-35481348	True	NA	NA	False	NA	NA	NA	35510470	35499928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35500030_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
WTC11_00048868	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481318	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35510183
WTC11_00048870	chr19	-	1378	4	NIC	ENSG00000236144.9	novel	1547	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	54.9565484926248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGTGCTACCGCTGT	-35542655	True	NA	-21	True	ATTAAA	-24	NA	35545484	35540737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35541585_35541750_35541929_35542910_35543098_35545318
WTC11_00048871	chr19	-	3577	3	NNC	ENSG00000236144.9	novel	1627	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_2	67	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGTGCTACCGCTGT	-35542663	True	NA	-21	True	ATTAAA	-24	NA	35545492	35540737	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35541585_35541750_35541899_35542910
WTC11_00048874	chr19	-	803	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	-8	13	8	multi-exon	FALSE	canonical	3	38	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACCTGTAGTCCCAGC	-35673118	True	NA	-5	True	AATAAA	-22	NA	35673291	35667939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35668686_35673234
WTC11_00048875	chr19	-	575	2	NIC	ENSG00000126246.10	novel	329	3	NA	NA	17	10	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGGGCAAAGACCCAAC	-35739635	False	897	23	True	NA	NA	NA	35740532	35739204	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35739627_35740379
WTC11_00048877	chr19	-	937	6	NIC	ENSG00000161265.15	novel	702	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	59.4844517500162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744260	False	NA	-5	True	AATAAA	-26	NA	35745157	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744982_35745124
WTC11_00048878	chr19	-	800	8	NIC	ENSG00000161265.15	novel	904	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	64.5951283940585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744476	True	NA	-5	True	AATAAA	-26	NA	35745373	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744490_35744541_35744625_35744739_35745124_35745188_35745347
WTC11_00048879	chr19	-	731	7	NIC	ENSG00000161265.15	novel	904	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	56.8350439625256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744503	True	NA	-5	True	AATAAA	-26	NA	35745400	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745188_35745347
WTC11_00048880	chr19	-	606	8	NIC	ENSG00000161265.15	novel	723	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	67.3601347616084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744503	True	NA	-5	True	AATAAA	-26	NA	35745400	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742620_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
WTC11_00048882	chr19	-	654	2	FSM	ENSG00000167604.15	ENST00000590094.6	751	2	0	97	0	55	multi-exon	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGGTGTGGGCAGG	-35896070	False	NA	NA	False	NA	NA	NA	35897058	35896217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35896539_35896725
WTC11_00048885	chr19	-	1142	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	82.0861674637627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004581	False	4148	-32	True	AATAAA	-18	NA	36008729	36003306	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
WTC11_00048886	chr19	-	996	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	93.1565289654401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004614	False	4148	-32	True	AATAAA	-18	NA	36008762	36003306	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008553
WTC11_00048888	chr19	-	873	6	ISM	ENSG00000239382.11	ENST00000485128.5	959	8	817	-54	0	0	3prime_fragment	FALSE	canonical	3	54	junction_2	92.9873109623028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	-36009274	False	NA	-10	True	AATAAA	-14	NA	36013422	36009120	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_36009554_36010566_36010646_36010893_36011046_36011403_36011465_36013020_36013090_36013343
WTC11_00048889	chr19	-	1513	7	ISM	ENSG00000239382.11	ENST00000252984.11	955	8	28	0	0	0	intron_retention	FALSE	canonical	3	74	junction_6	81.5795453666066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTCCCCTGGGTTATT	-36010051	True	NA	-94	True	GGGGCT	-35	NA	36014199	36009204	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36013513
WTC11_00048890	chr19	-	1065	8	NIC	ENSG00000239382.11	novel	955	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	108.90081613607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	-36010073	True	NA	-10	True	AATAAA	-14	NA	36014221	36009120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36013513_36013589_36014174
WTC11_00048891	chr19	-	1242	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	46.5044800709208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36053346	True	NA	-1	True	AATAAA	-21	NA	36054392	36034983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
WTC11_00048892	chr19	-	843	3	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-36160382	True	NA	-25	True	AATAAA	-22	NA	36160684	36155512	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_36155915_36158606_36158795_36160431
WTC11_00048895	chr19	-	4138	6	NNC	ENSG00000232677.10	novel	1019	6	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	350.482296271866	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315093	True	NA	-31	True	NA	NA	NA	36331687	36313093	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36313323_36315956_36316071_36316177_36317178_36324911_36327226_36330252_36330493_36331446
WTC11_00048903	chr19	-	3666	3	FSM	ENSG00000225975.8	ENST00000665321.2	3702	3	36	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-36687127	True	NA	NA	False	NA	NA	NA	36687432	36682635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36686016_36686685_36686807_36687267
WTC11_00048906	chr19	-	2162	5	FSM	ENSG00000197863.9	ENST00000613249.4	2183	5	21	0	21	0	multi-exon	FALSE	canonical	2	4	junction_4	9.73075022801428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGCACACATCCAGCA	-36850684	False	NA	NA	False	NA	NA	NA	36850766	36818321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
WTC11_00048907	chr19	-	5211	6	FSM	ENSG00000185869.15	ENST00000520965.5	4977	6	-234	0	36	0	multi-exon	FALSE	canonical	3	8	junction_5	8.11418511004032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	-36916162	True	NA	0	True	TATAAA	-20	NA	36916255	36888123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915795
WTC11_00048917	chr19	-	1166	8	NIC	ENSG00000167645.17	novel	1257	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_7	340.337587505976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	-38315744	False	2916	-12	True	AATAAA	-17	NA	38315763	38305113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
WTC11_00048918	chr19	-	936	4	FSM	ENSG00000167645.17	ENST00000586319.5	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	44.0782133132559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGACAGCCTCTCCTTG	-38308888	False	NA	-14	True	AATAAA	-15	NA	38309139	38305115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307753_38308791_38308850_38308978
WTC11_00048929	chr19	-	361	2	ISM	ENSG00000205076.5	ENST00000378626.5	494	4	1497	3	1412	-3	3prime_fragment	FALSE	canonical	3	35	junction_1	0	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGACTGTGTCTGTGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	38772020	38770970	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_38771140_38771828
WTC11_00048930	chr19	-	2078	13	NNC	ENSG00000104824.18	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	1402	junction_5	112.011036162613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGGATTCCAGGATG	-38804766	True	NA	-17	True	AATAAA	-25	NA	38849940	38836387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844103_38845647_38845736_38845852_38846091_38847315_38847435_38849699
WTC11_00048931	chr19	-	2148	14	NNC	ENSG00000104824.18	novel	1952	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	35	junction_7	546.689282497502	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGGATTCCAGGATG	-38804766	True	NA	-17	True	AATAAA	-25	NA	38849940	38836387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38841612_38841683_38843841_38843915_38844007_38844103_38845647_38845736_38845852_38846091_38847315_38847435_38849699
WTC11_00048936	chr19	-	1789	17	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	121.779369532569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTGGATCTGTGAAC	-38924868	True	NA	-8	True	AATAAA	-15	NA	38930751	38915264	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_38915491_38915614_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
WTC11_00048944	chr19	-	3600	6	FSM	ENSG00000197782.15	ENST00000455521.5	3600	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	38.6698849235422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTTTCAGATTTCTT	-40089477	True	NA	NA	False	NA	NA	NA	40090938	40072992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090905
WTC11_00048945	chr19	-	3549	6	FSM	ENSG00000197782.15	ENST00000683561.1	3550	6	1	0	1	0	multi-exon	FALSE	canonical	3	28	junction_5	31.1897419033887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGTACCATAATTACC	-40089481	True	NA	NA	False	AATATA	-15	NA	40090942	40073044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
WTC11_00048946	chr19	-	584	6	NNC	ENSG00000197782.15	novel	7500	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	39.540359128364	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40089427	True	NA	1	True	AGTAAA	-36	NA	40090888	40076113	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090747
WTC11_00048947	chr19	-	1111	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	-665	0	3	0	multi-exon	FALSE	canonical	3	22	junction_2	36.7287353444139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40089439	True	NA	1	True	AGTAAA	-36	NA	40090900	40076113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
WTC11_00048965	chr19	-	1735	10	NIC	ENSG00000188493.15	novel	1792	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_3	53.1108786605792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-40747756	True	NA	-4	True	AATAAA	-19	NA	40750441	40740855	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40741865_40742072_40742190_40742576_40742771_40743914_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480_40749608_40750284
WTC11_00048983	chr19	-	1910	5	FSM	ENSG00000160570.14	ENST00000595337.5	1894	5	0	-16	0	1	multi-exon	FALSE	canonical	2	5	junction_4	96.6397951156769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCTCTAGGACTCTTT	-42219936	True	NA	-7	True	ATTAAA	-29	NA	42220123	42198596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42220073
WTC11_00048991	chr19	-	1895	11	NIC	ENSG00000176531.11	novel	2402	16	NA	NA	280	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.6172285851661	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTTTCCAGC	-43503871	True	NA	-2	True	ATTAAA	-20	NA	43504134	43475102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43475545_43478046_43478133_43479376_43479594_43494701_43494816_43495255_43495340_43495494_43495606_43497117_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905
WTC11_00048995	chr19	-	2000	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	-6	0	5	multi-exon	FALSE	canonical	2	5	junction_15	51.6919937922907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTCCCAAAACTCTAAG	-43573087	True	NA	-13	True	AATAAA	-22	NA	43575563	43543305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
WTC11_00049004	chr19	-	3731	11	NNC	ENSG00000124459.12	novel	3926	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	21.6785608378416	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTGCCAAGTATTAT	-43934249	True	NA	1	True	ATTAAA	-39	NA	43935278	43912623	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43931246_43931366_43932607_43932691_43934425_43934695_43935229
WTC11_00049007	chr19	-	616	3	NNC	ENSG00000266903.2	novel	752	2	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	-44717581	True	NA	NA	False	ATTAAA	-21	NA	44718755	44715556	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_44715737_44715949_44716084_44718453
WTC11_00049009	chr19	-	379	2	FSM	ENSG00000266903.2	ENST00000586169.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATTCTGTCTGTCC	-44717585	True	NA	NA	False	NA	NA	NA	44718759	44716107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44716181_44718453
WTC11_00049013	chr19	-	4023	22	FSM	ENSG00000104884.17	ENST00000684407.1	4013	22	0	-10	0	0	multi-exon	TRUE	canonical	2	3	junction_21	34.1228938117236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	-45364966	True	NA	-25	True	AATAAA	-16	NA	45370588	45349836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370535
WTC11_00049016	chr19	-	3126	13	FSM	ENSG00000104881.16	ENST00000360957.10	3131	13	0	5	0	-5	multi-exon	FALSE	canonical	2	4	junction_6	27.0246800782791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGACTTTCTTCTCT	-45404243	True	NA	-10	True	AATAAA	-13	NA	45405069	45379642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45404998
WTC11_00049017	chr19	-	3118	13	FSM	ENSG00000104881.16	ENST00000418234.6	3118	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	27.1779117830802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	-45405530	True	NA	-5	True	AATAAA	-18	NA	45406349	45379637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
WTC11_00049018	chr19	-	841	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	-5	0	0	multi-exon	FALSE	canonical	3	25	junction_1	132.084821232419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423459	False	NA	-8	True	AATAAA	-22	NA	45423501	45409613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
WTC11_00049019	chr19	-	813	7	NIC	ENSG00000012061.16	novel	949	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	131.828697769323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423830	False	NA	-8	True	AATAAA	-22	NA	45423872	45409613	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
WTC11_00049021	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	24.7616414821168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45493141	False	NA	-23	True	AATAAA	-16	NA	45493267	45485293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
WTC11_00049026	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4349.88538801758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643954	True	NA	-17	True	AATAAA	-17	NA	45691940	45687461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
WTC11_00049028	chr19	-	3368	14	FSM	ENSG00000104936.20	ENST00000674226.1	3357	14	0	-11	0	0	multi-exon	TRUE	canonical	3	22	junction_7	21.0586669953561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACAGTGTCCGCGGTTT	-45780731	False	NA	-1	True	AATAAA	-29	NA	45780747	45769708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
WTC11_00049031	chr19	-	6519	20	Fusion	ENSG00000104936.20_ENSG00000185800.12	novel	2754	15	NA	NA	0	0	multi-exon	FALSE	non_canonical	2	18	junction_15	33.9201441224137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTGTCTGTCCCCACC	-45790716	True	NA	-81	True	NA	NA	NA	45792802	45769788	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770231_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
WTC11_00049033	chr19	-	3402	5	FSM	ENSG00000185800.12	ENST00000270223.7	3410	5	8	0	8	0	multi-exon	FALSE	canonical	3	52	junction_2	48.5103081829007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCGAGTCGGAATCCAT	-45790751	True	NA	NA	False	TATAAA	-27	NA	45792837	45782946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
WTC11_00049035	chr19	-	2151	2	FSM	ENSG00000185800.12	ENST00000598237.1	643	2	-336	-1172	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTGCTCTTGGCTTCTG	-45790687	True	NA	-14	True	AGTAAA	-19	NA	45792773	45789394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45791088_45792315
WTC11_00049036	chr19	-	653	4	FSM	ENSG00000125755.19	ENST00000596824.1	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	120.820344129437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGCGCTGTTGGACTC	-45817984	False	NA	NA	False	GGGGCT	-5	NA	45818013	45815895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45816184_45816481_45816615_45816797_45816975_45817958
WTC11_00049049	chr19	-	1829	4	FSM	ENSG00000105327.18	ENST00000449228.5	1827	4	0	-2	0	0	multi-exon	FALSE	canonical	2	13	junction_3	81.6591833306103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTCTGCTTGCCTTC	-47232754	False	NA	-5	True	AATAAA	-20	NA	47232766	47220821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47221919_47226563_47226755_47228157_47228447_47232514
WTC11_00049054	chr19	-	961	5	ISM	ENSG00000118162.14	ENST00000594208.5	1623	13	4138	-52	3554	9	3prime_fragment	FALSE	canonical	3	139	junction_3	26.8642420328585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGATTCTTTTTTTCG	-47480009	False	2719	-7	True	NA	NA	NA	47480024	47475140	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862
WTC11_00049060	chr19	-	3931	13	ISM	ENSG00000105483.18	ENST00000651546.1	5610	14	6065	1558	0	0	3prime_fragment	FALSE	canonical	2	20	junction_9	15.7803939536798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTTTGTTTTTTTCCT	-48248921	False	NA	NA	False	AATAAA	-30	NA	48249847	48209643	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750
WTC11_00049062	chr19	-	1597	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	-3	0	0	multi-exon	FALSE	canonical	3	1002	junction_2	35.8608421540822	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-48390565	False	NA	-15	True	AATAAA	-16	NA	48390855	48382574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
WTC11_00049066	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_3	788.970637391954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416502	True	NA	-35	True	ATTAAA	-17	NA	48619183	48615330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
WTC11_00049071	chr19	-	3539	10	ISM	ENSG00000105552.15	ENST00000597011.5	1579	11	1820	-46	-1304	0	3prime_fragment	TRUE	canonical	3	203	junction_9	21.85812841434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48809086	False	NA	-2	True	AATAAA	-16	NA	48809096	48795063	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999
WTC11_00049072	chr19	-	2061	12	NIC	ENSG00000105552.15	novel	2041	12	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	87.8728420141079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810861	False	1018	-2	True	AATAAA	-16	NA	48810871	48795063	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810808
WTC11_00049075	chr19	-	1603	11	NIC	ENSG00000105559.12	novel	3073	20	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	23.52891837718	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTTCTTTCTGTCTGT	-48859357	False	841	-9	True	ATTAAA	-19	NA	48859374	48837092	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48837552_48838016_48838130_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48859201
WTC11_00049081	chr19	-	2150	12	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	104.864729867806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49356583	True	NA	-3	True	GATAAA	-18	NA	49362402	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362332
WTC11_00049087	chr19	-	557	2	FSM	ENSG00000126456.16	ENST00000596644.5	550	2	0	-7	0	1	multi-exon	FALSE	canonical	3	545	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGTGTCTGGTGTTGG	-49660988	False	NA	-29	True	AATAAA	-21	NA	49661003	49659567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712
WTC11_00049090	chr19	-	1444	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	-2	0	1	multi-exon	FALSE	canonical	3	38	junction_6	153.880906331271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGTGTCTGGTGTTGG	-49665860	False	NA	-29	True	AATAAA	-21	NA	49665875	49659567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
WTC11_00049091	chr19	-	1504	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_7	134.274619602469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49659570	True	NA	-33	True	AATAAA	-17	NA	49665770	49659571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665634
WTC11_00049097	chr19	-	3110	2	NIC	ENSG00000213024.12	novel	579	3	NA	NA	4	5	intron_retention	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTAATATGGATAAATG	-49918178	True	NA	4	True	AATAAA	-24	NA	49929461	49906819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49909885_49929416
WTC11_00049104	chr19	-	654	5	FSM	ENSG00000142530.11	ENST00000602178.5	653	5	0	-1	0	1	multi-exon	FALSE	canonical	2	2	junction_2	23.0271578793389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCCACGAGCGGTTT	-50475584	True	NA	NA	False	AATAAA	-23	NA	50476271	50466786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50466956_50467621_50467733_50475324_50475456_50475832_50475934_50476129
WTC11_00049106	chr19	-	2552	12	NNC	ENSG00000213023.11	novel	2526	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	92.0782994149028	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-50639077	True	NA	0	True	AATAAA	-25	NA	50639814	50621976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639163_50639306_50639400_50639789
WTC11_00049116	chr19	-	3693	10	FSM	ENSG00000186806.6	ENST00000335624.5	3689	10	0	-4	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	45.4429502606847	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGGCTGGTTTCAGGC	-51342123	False	NA	-36	True	AATAAA	-18	NA	51342139	51331536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887_51339143_51340014_51340300_51340432_51340727_51341152_51342008_51342084
WTC11_00049117	chr19	-	3463	5	FSM	ENSG00000105379.10	ENST00000354232.8	3551	5	98	-10	98	10	multi-exon	FALSE	canonical	3	738	junction_4	14.8218588577816	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTCCTAGAGACCCAT	-51356958	False	NA	-10	True	AATAAA	-29	NA	51357008	51345158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149
WTC11_00049121	chr19	-	2474	7	NIC	ENSG00000161551.15	novel	7308	7	NA	NA	-10	-4848	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	64.7158318256738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTCACGGGGCTACAT	-51887394	True	NA	NA	False	AAAACA	-45	NA	51887901	51871895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887831
WTC11_00049127	chr19	-	782	4	ISM	ENSG00000196267.14	ENST00000597252.5	3209	5	-124	5475	6	-2	5prime_fragment	FALSE	canonical	1	2	junction_3	12.3648246606609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCCTTTCATTTCCC	-52170729	True	NA	-2	True	AATAAA	-17	NA	52171615	52160322	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171331
WTC11_00049135	chr19	-	4112	5	NIC	ENSG00000204604.13	novel	4027	5	NA	NA	19	-3	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	28.235615806991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATTTGGATGAGTTT	-52855922	True	NA	-8	True	AATAAA	-15	NA	52857600	52838538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52842152_52849086_52849214_52853871_52854127_52854257_52854346_52857571
WTC11_00049144	chr19	-	6267	8	NIC	ENSG00000170949.18	novel	1926	6	NA	NA	0	1724	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	67.3295277432008	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTCTATTTCCTTA	-53101456	True	NA	0	True	AATAAA	-19	NA	53103393	53064881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53085808_53086110_53086261_53086322_53091636_53091721_53103264
WTC11_00049145	chr19	-	4242	7	NIC	ENSG00000170949.18	novel	4336	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_5	50.3832533906081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-53101464	True	NA	NA	False	AATAAA	-20	NA	53103401	53066613	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53086261_53086322_53091636_53091721_53103264
WTC11_00049155	chr19	-	800	5	NIC	ENSG00000197928.11	novel	622	5	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	115.72164879572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAGCAGAGTGTTTC	-53251853	True	NA	-8	True	AATAAA	-16	NA	53254843	53238297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254598
WTC11_00049156	chr19	-	4065	5	NIC	ENSG00000197928.11	novel	796	5	NA	NA	0	9	intron_retention	FALSE	canonical	3	34	junction_1	113.52752970095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTGGTTTTTTTAA	-53251870	True	NA	0	True	AATAAA	-29	NA	53254860	53238587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254833
WTC11_00049170	chr19	-	1165	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	316.974778176435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	-55143760	True	NA	-73	True	NA	NA	NA	55146942	55132864	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433_55146467_55146680
WTC11_00049171	chr19	-	1083	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	3	63	junction_10	291.093868021984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCTCTGATGTTAT	-55143757	True	NA	-36	True	AATAAA	-19	NA	55146939	55132827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146659
WTC11_00049175	chr19	-	1020	4	FSM	ENSG00000167646.14	ENST00000587789.2	1020	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	15.9652400197707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTGGCTGACTAGGGG	-55160397	False	262	-92	True	NA	NA	NA	55160659	55158752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55159450_55159532_55159721_55159898_55160014_55160639
WTC11_00049183	chr19	-	2732	4	NNC	ENSG00000187550.9	novel	2251	4	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCTGCTGCGAGTC	-55536758	True	NA	-4	True	AATAAA	-19	NA	55537131	55528610	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_55530458_55530793_55531346_55536041_55536297_55537053
WTC11_00049190	chr19	-	653	4	FSM	ENSG00000204514.11	ENST00000597342.5	648	4	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.1081870279207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884139	True	NA	-2	True	AATAAA	-22	NA	57888958	57850314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57850562_57876915_57877043_57885882_57885970_57888766
WTC11_00049192	chr19	-	672	5	NIC	ENSG00000204514.11	novel	757	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	70.4733992368752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTCAGTGTGTGTGGT	-57884139	True	NA	-3	True	AATAAA	-29	NA	57888958	57864759	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_57864920_57868457_57868580_57875155_57875227_57876915_57877043_57888766
WTC11_00049205	chr19	+	1182	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	19592898	19594080	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_19592900_19594100
WTC11_00049208	chr19	+	209	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGACCCAACTCCGGCAC	NA	False	NA	NA	False	NA	NA	NA	20155055	20155264	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20155100_20155300
WTC11_00049210	chr19	+	3038	1	Antisense	novelGene_ENSG00000288815.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTGCAATGGTGCCC	NA	False	NA	NA	False	NA	NA	NA	20634000	20637038	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_20634000_20637000
WTC11_00049212	chr19	+	217	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCCGGCTTACAGCTT	22569765	False	NA	NA	False	NA	NA	NA	22569792	22570009	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22569800_22570000
WTC11_00049213	chr19	+	209	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAATTGTTTTGCCTAT	22571158	False	NA	NA	False	NA	NA	NA	22571185	22571394	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22571200_22571400
WTC11_00049220	chr19	+	881	2	NNC	ENSG00000141933.9	novel	1114	2	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTGTGTATGCGAGCG	505606	True	NA	5	True	AATAAA	-18	NA	507514	519654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_507630_518888
WTC11_00049221	chr19	+	899	2	FSM	ENSG00000099804.9	ENST00000606400.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTGGTTTGTTTGAA	536942	False	NA	2	True	NA	NA	NA	536952	542042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_537148_541338
WTC11_00049222	chr19	+	2084	3	ISM	ENSG00000070404.10	ENST00000592058.3	589	4	2306	-1611	333	-3	3prime_fragment	FALSE	canonical	3	7	junction_1	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCATTTTGGGGTGTCC	680294	False	NA	-2	True	AATAAA	-5	NA	680366	683382	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_680490_681332_681561_681649
WTC11_00049224	chr19	+	345	1	FSM	ENSG00000267530.4	ENST00000686865.1	613	1	-10	278	2	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTGCAGGAGGTTTCA	782455	True	NA	NA	False	NA	NA	NA	782756	783101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_782800_783100
WTC11_00049230	chr19	+	4080	23	FSM	ENSG00000180448.11	ENST00000586866.5	4120	23	40	0	40	0	multi-exon	FALSE	canonical	1	1	junction_1	63.1989512414291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1067498	False	NA	14	True	AATAAA	-16	NA	1067537	1086628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1067675_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
WTC11_00049231	chr19	+	569	1	FSM	ENSG00000099624.8	ENST00000592624.1	1587	1	976	42	239	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACTAGCCTTGGCAA	1242723	False	NA	NA	False	NA	NA	NA	1242743	1243312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1242700_1243300
WTC11_00049233	chr19	+	2233	9	NIC	ENSG00000099622.14	novel	1052	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_7	347.081019900253	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCGAGTCTGTGGTT	1269225	False	NA	12	True	AATAAA	-18	NA	1269265	1274805	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426_1273716_1274306_1274441_1274648
WTC11_00049234	chr19	+	439	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	83	0	83	0	multi-exon	FALSE	canonical	3	144	junction_1	124.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354793	1357094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1355021_1356323_1356450_1357008
WTC11_00049235	chr19	+	2180	13	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_1	94.953022010302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCGCTCCCGGCGCTA	1351202	True	NA	NA	False	NA	NA	NA	1354984	1373160	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071
WTC11_00049236	chr19	+	4318	15	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	13	0	intron_retention	FALSE	canonical	3	64	junction_5	139.10574453726	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	1351202	True	NA	20	True	ATTAAA	-13	NA	1354984	1378428	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
WTC11_00049237	chr19	+	3697	12	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	13	0	intron_retention	FALSE	canonical	1	19	junction_10	151.973138122314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	1351202	True	NA	20	True	ATTAAA	-13	NA	1354984	1378428	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1373071_1373161_1376518
WTC11_00049239	chr19	+	1200	6	FSM	ENSG00000115286.21	ENST00000538662.5	1186	6	-14	0	-4	0	multi-exon	FALSE	canonical	3	1158	junction_1	235.525794765669	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCATACCTGAAATTCA	1361000	True	NA	NA	False	AAAAAG	-7	NA	1383885	1393877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391166_1393241
WTC11_00049240	chr19	+	1757	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	-14	0	-4	0	multi-exon	FALSE	canonical	3	11	junction_7	605.168554695167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	1361000	True	NA	30	True	AATAAA	-26	NA	1383885	1395589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
WTC11_00049241	chr19	+	2802	6	FSM	ENSG00000115286.21	ENST00000538523.5	931	6	52	-1923	-13	0	multi-exon	FALSE	canonical	3	1643	junction_1	55.7257570608063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1364905	False	NA	25	True	AATAAA	-21	NA	1387790	1395584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
WTC11_00049245	chr19	+	333	1	FSM	ENSG00000288156.1	ENST00000672226.1	2609	1	2033	243	2033	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTAAGCAACATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	2295205	2295538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2295200_2295500
WTC11_00049246	chr19	+	6755	13	NIC	ENSG00000005206.17	novel	3691	15	NA	NA	-8	-291	intron_retention	FALSE	canonical	3	122	junction_4	34.7118095498092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCGGCCTCTGCCTCCG	2324575	True	NA	27	True	ATTAAA	-19	NA	2328650	2354804	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2328776_2334601_2334722_2337442_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
WTC11_00049249	chr19	+	2706	6	NNC	ENSG00000172006.12	novel	2486	6	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.6486202670273	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTCTGTGTCTTTACTT	2819446	True	NA	4	True	NA	NA	NA	2819967	2835770	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_2820125_2823039_2823113_2823510_2823578_2827616_2827744_2832302_2832495_2833680
WTC11_00049251	chr19	+	1896	13	FSM	ENSG00000161082.13	ENST00000292672.7	1896	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	3.85411035994906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3224297	True	NA	NA	False	AATAAA	-17	NA	3224660	3297076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290230_3290375_3293318_3293487_3296757
WTC11_00049252	chr19	+	333	4	FSM	ENSG00000161082.13	ENST00000591483.1	473	4	140	0	140	0	multi-exon	FALSE	canonical	2	8	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCAGCTGAAGCGGCC	NA	False	NA	NA	False	NA	NA	NA	3284901	3293401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3284965_3285941_3286026_3290271_3290375_3293318
WTC11_00049253	chr19	+	4058	14	NNC	ENSG00000105325.15	novel	5178	14	NA	NA	-95	183	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	54.357571341352	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGATTTGTTTTGTG	3506204	False	NA	5	True	NA	NA	NA	3506215	3536185	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3533486_3534514_3534794
WTC11_00049255	chr19	+	711	8	FSM	ENSG00000064961.19	ENST00000416526.5	711	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	347.922991714065	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACGCGGTACTGCAGAG	3572756	False	NA	NA	False	NA	NA	NA	3572776	3576944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572825_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891
WTC11_00049258	chr19	+	825	6	NIC	ENSG00000077009.14	novel	1160	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	30	junction_4	195.793360459439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	3933415	False	NA	13	True	AGTAAA	-18	NA	3933608	3942414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3941070_3941178_3942082
WTC11_00049259	chr19	+	3786	21	ISM	ENSG00000089847.13	ENST00000600132.5	4026	22	3036	0	-31	0	3prime_fragment	TRUE	canonical	0	0	junction_2	20.4619158438305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	4186296	False	NA	16	True	AATAAA	-19	NA	4186389	4224814	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4186462_4199682_4199770_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
WTC11_00049262	chr19	+	1566	7	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	231.48554070515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGAATGCAGATATTT	4395910	True	NA	NA	False	NA	NA	NA	4402716	4428863	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4402815_4405911_4405963_4408902_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663
WTC11_00049263	chr19	+	2294	12	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	190.839511129809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	4409669	False	NA	27	True	TATAAA	-19	NA	4409691	4443397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
WTC11_00049264	chr19	+	3040	15	NNC	ENSG00000167674.15	novel	2267	16	NA	NA	-189	0	intron_retention	FALSE	canonical	3	44	junction_6	114.707525152148	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATCACTTTTAT	NA	False	NA	71	True	TATAAA	-14	NA	4472107	4502201	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493705_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190
WTC11_00049265	chr19	+	2292	16	NIC	ENSG00000167674.15	novel	3100	15	NA	NA	-25	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	135.218079001622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAAGAAATCACTT	4474554	True	NA	67	True	TATAAA	-10	NA	4474866	4502197	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4475031_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501913
WTC11_00049266	chr19	+	3100	15	FSM	ENSG00000167674.15	ENST00000615225.1	3100	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	120.538587267348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATCACTTTTAT	4475336	False	NA	71	True	TATAAA	-14	NA	4475348	4502201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4496918_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
WTC11_00049267	chr19	+	566	1	FSM	ENSG00000185361.9	ENST00000598107.1	2946	1	-25	2405	-4	-2405	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCTAATGAGCTCCCA	4638979	True	NA	NA	False	NA	NA	NA	4639511	4640077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4639500_4640100
WTC11_00049268	chr19	+	4662	1	FSM	ENSG00000127663.15	ENST00000624683.1	5076	1	507	-93	507	93	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACCACTGATGACTTT	NA	False	NA	NA	False	NA	NA	NA	5074597	5079259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5074600_5079300
WTC11_00049269	chr19	+	243	1	FSM	ENSG00000239524.2	ENST00000486380.2	400	1	204	-47	204	47	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCCAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-11	NA	5277937	5278180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5277900_5278200
WTC11_00049271	chr19	+	2161	6	ISM	ENSG00000167733.14	ENST00000579562.5	1575	7	-502	0	-69	0	intron_retention	TRUE	canonical	3	15	junction_3	28.6607745882766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5680534	5688522	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686899_5686992_5687281_5687376_5687502
WTC11_00049272	chr19	+	1595	7	FSM	ENSG00000167733.14	ENST00000579562.5	1575	7	-20	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	26.3085326251558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681016	5688522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00049273	chr19	+	534	3	NIC	ENSG00000167733.14	novel	730	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	5680137	True	NA	NA	False	AATAAA	-23	NA	5681156	5685589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5681272_5684988_5685120_5685301
WTC11_00049274	chr19	+	1349	6	NIC	ENSG00000167733.14	novel	1575	7	NA	NA	5	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.7641307137469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTTGCATATCTGTT	5680144	True	NA	5	True	AATAAA	-7	NA	5681163	5688510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5681272_5684988_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
WTC11_00049275	chr19	+	208	1	Genic_Genomic	ENSG00000267709.1	novel	NA	NA	NA	NA	-57	-10622	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGACATTTGGTGCCGAA	NA	False	NA	NA	False	NA	NA	NA	5847409	5847617	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_5847400_5847600
WTC11_00049276	chr19	+	1206	5	FSM	ENSG00000105519.18	ENST00000588776.8	1537	5	0	331	0	3	multi-exon	FALSE	canonical	2	16	junction_1	1.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTATCTACATTCTG	5913917	False	NA	11	True	AATAAA	-24	NA	5914253	5915880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5914310_5914384_5914490_5914562_5914741_5914939_5915147_5915220
WTC11_00049280	chr19	+	4513	35	NIC	ENSG00000032444.17	novel	4457	35	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	83.9156820594442	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7534677	False	NA	22	True	AATAAA	-16	NA	7534690	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534903_7535126_7535203_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00049282	chr19	+	4376	34	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	134	junction_29	63.722423769759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7533322	True	NA	22	True	AATAAA	-16	NA	7534751	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
WTC11_00049283	chr19	+	4366	34	NNC	ENSG00000032444.17	novel	4617	35	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_33	72.2114027355247	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7533329	False	NA	22	True	AATAAA	-16	NA	7534758	7561764	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561490
WTC11_00049286	chr19	+	1938	13	NNC	ENSG00000090661.12	novel	1780	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	172.203589941931	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	8204433	True	NA	8	True	ATTAAA	-13	NA	8209356	8262418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_8209495_8210705_8210863_8250772_8250921_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00049287	chr19	+	2401	9	FSM	ENSG00000090661.12	ENST00000557925.1	2401	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_6	30.115403035656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	NA	False	NA	8	True	ATTAAA	-13	NA	8250525	8262418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8251250_8254498_8254617_8255606_8255726_8255821_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
WTC11_00049288	chr19	+	2592	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	399	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_5	18.6182705963792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323155	True	NA	4	True	AATAAA	-18	NA	9324170	9343843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
WTC11_00049292	chr19	+	2427	10	NIC	ENSG00000270011.8	novel	2435	12	NA	NA	-7396	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	21.7255609824004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	NA	False	NA	13	True	AATAAA	-14	NA	9355616	9382185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9355722_9357827_9357905_9364861_9364949_9371609_9371753_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9380667
WTC11_00049294	chr19	+	446	3	FSM	ENSG00000130813.18	ENST00000592551.5	1461	3	55	960	55	-960	multi-exon	FALSE	canonical	3	165	junction_2	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCTATCCCCTCCCCTC	10086148	False	NA	NA	False	AAAAAG	-36	NA	10086176	10087300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250
WTC11_00049295	chr19	+	1910	7	NIC	ENSG00000130813.18	novel	2140	8	NA	NA	77	0	intron_retention	FALSE	canonical	2	4	junction_6	77.9046782220997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCAGAGGGGCGTCTT	10084276	False	NA	12	True	AATAAA	-18	NA	10086928	10093244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10087053_10087250_10087301_10089110_10089379_10089656_10089696_10089897_10090048_10091249_10091354_10092069
WTC11_00049298	chr19	+	589	1	FSM	ENSG00000105376.5	ENST00000588912.1	928	1	-236	575	-195	-575	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCCGCACCCAACCC	10289727	True	NA	NA	False	NA	NA	NA	10289756	10290345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10289800_10290300
WTC11_00049299	chr19	+	1892	3	ISM	ENSG00000105376.5	ENST00000586480.1	2599	9	2621	4	2621	-4	intron_retention	FALSE	canonical	3	11	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAACTCCCTGTCTCCGC	10294072	False	NA	NA	False	AATAAA	-10	NA	10294093	10296772	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_10294319_10294400_10294641_10295345
WTC11_00049300	chr19	+	1628	8	NIC	ENSG00000130734.10	novel	1619	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	117.218790720427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10540666	False	NA	15	True	AATAAA	-15	NA	10543970	10553418	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10544326_10544708_10544867_10544956_10545131_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
WTC11_00049301	chr19	+	931	5	FSM	ENSG00000130734.10	ENST00000589753.1	931	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	139.830924691214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10544984	False	NA	15	True	AATAAA	-15	NA	10545009	10553418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10545131_10551896_10551976_10552044_10552122_10552204_10552325_10552884
WTC11_00049302	chr19	+	1725	7	FSM	ENSG00000129353.15	ENST00000586549.1	1300	7	0	-425	0	0	multi-exon	FALSE	canonical	3	37	junction_6	254.632687523726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	10637724	False	NA	17	True	AATAAA	-17	NA	10637743	10644555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
WTC11_00049304	chr19	+	601	7	FSM	ENSG00000142453.12	ENST00000589693.1	601	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	647.569408549299	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGAGGTGTCACTCCCC	10871892	False	NA	NA	False	NA	NA	NA	10871909	10913931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10908549_10908634_10909102_10909208_10912183_10912295_10913876
WTC11_00049305	chr19	+	5317	34	NNC	ENSG00000127616.20	novel	5563	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	282.823154354658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAAGAGAGAGAGAGAG	10960846	False	NA	-86	True	NA	NA	NA	10960956	11062030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035132_11041296_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
WTC11_00049307	chr19	+	715	1	NIC	ENSG00000127616.20	novel	1968	8	NA	NA	4221	-726	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTGACGAGATCTTC	11064670	False	NA	8	True	AATAAA	-19	NA	11064681	11065396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11064700_11065400
WTC11_00049309	chr19	+	745	1	FSM	ENSG00000273733.1	ENST00000615848.1	491	1	-37	-217	-37	217	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTTCTGTGACCAAGT	NA	False	NA	NA	False	NA	NA	NA	11221045	11221790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11221000_11221800
WTC11_00049313	chr19	+	2669	11	ISM	ENSG00000130175.10	ENST00000592741.5	2100	18	6775	3	3	0	intron_retention	FALSE	canonical	3	261	junction_5	236.479787719796	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11442321	True	NA	15	True	AATAAA	-16	NA	11442409	11450965	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
WTC11_00049314	chr19	+	1014	3	FSM	ENSG00000267500.1	ENST00000431363.1	1407	3	0	393	0	-393	multi-exon	FALSE	canonical	3	9	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGCTTTTAGATTTCC	11648352	False	NA	NA	False	NA	NA	NA	11648363	11652484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11648485_11650356_11650418_11651652
WTC11_00049315	chr19	+	268	1	FSM	ENSG00000171295.13	ENST00000587795.1	1659	1	1365	26	1365	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTGAGACCCTGTCT	11816369	False	NA	NA	False	AAAACA	-40	NA	11817381	11817649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11817400_11817600
WTC11_00049316	chr19	+	764	4	NNC	ENSG00000219665.8	novel	622	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	50.4667107001129	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985483	True	NA	4	True	AATAAA	-20	NA	11987655	12003811	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_11987824_12001129_12001257_12001773_12001823_12003391
WTC11_00049317	chr19	+	430	3	FSM	ENSG00000219665.8	ENST00000591838.5	430	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTCTTATGCTTGC	NA	False	NA	12	True	AATAAA	-14	NA	12034575	12046275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12034593_12035553_12035773_12046081
WTC11_00049318	chr19	+	1586	3	FSM	ENSG00000234773.8	ENST00000415793.7	2102	3	5	511	3	-208	multi-exon	FALSE	canonical	1	1	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAAAGCCTTCAGTCA	12194208	True	NA	NA	False	TATAAA	-11	NA	12195019	12209355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12195144_12207331_12207709_12208270
WTC11_00049319	chr19	+	227	1	FSM	ENSG00000213293.4	ENST00000461223.1	412	1	231	-46	231	46	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCCTCATGCCCGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	12260356	12260583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12260400_12260600
WTC11_00049322	chr19	+	1472	10	FSM	ENSG00000123154.12	ENST00000546754.5	1480	10	8	0	3	0	multi-exon	FALSE	canonical	3	17	junction_3	60.7510605506166	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATAGAAGAGGGGG	12666002	True	NA	-19	True	AAAAAG	-25	NA	12666809	12675791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12666993_12668507_12668628_12669754_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
WTC11_00049323	chr19	+	1237	10	NIC	ENSG00000123154.12	novel	1450	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	73.1469010676629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	12668528	True	NA	22	True	AATAAA	-34	NA	12669748	12675832	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672462_12672550_12672846_12672915_12673007_12673117_12673201_12673317_12675522
WTC11_00049324	chr19	+	4981	24	NIC	ENSG00000105613.10	novel	4853	26	NA	NA	-492	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	15.9899543132993	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	12839120	False	NA	23	True	AATAAA	-20	NA	12840010	12874952	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
WTC11_00049325	chr19	+	1006	2	FSM	ENSG00000105607.13	ENST00000588242.2	1006	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCGGAAAATCAAACAAGAG	12899557	False	NA	NA	False	NA	NA	NA	12899570	12900670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12900140_12900233
WTC11_00049327	chr19	+	2073	12	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	51.0409007925899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731334	True	NA	8	True	ATTAAA	-14	NA	13731780	13763289	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13732069_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759116_13759273_13761490_13761569_13762298_13762438_13762589
WTC11_00049329	chr19	+	934	2	FSM	ENSG00000187556.8	ENST00000339133.6	948	2	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCCCTGGTCTTGGGA	NA	False	NA	NA	False	AATAAA	-24	NA	13877147	13880757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13877766_13880441
WTC11_00049330	chr19	+	2942	25	NIC	ENSG00000132024.18	novel	3581	29	NA	NA	-32	256	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	48.5291292822042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCACCTGGAGGGGGAGG	13902941	True	NA	NA	False	GGGGCT	-37	NA	13906251	13929793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927892_13928031_13928123_13928189_13929378_13929443_13929533
WTC11_00049332	chr19	+	3002	14	NNC	ENSG00000104998.4	novel	2950	14	NA	NA	-56	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	30.7607680669876	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	14029876	True	NA	10	True	AATAAA	-21	NA	14031705	14053218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_14031973_14032389_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
WTC11_00049335	chr19	+	2330	7	FSM	ENSG00000167460.17	ENST00000659595.1	2330	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1093.50375958303	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	16034643	True	NA	21	True	AATAAA	-32	NA	16076448	16102946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16076698_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
WTC11_00049337	chr19	+	600	4	FSM	ENSG00000072958.9	ENST00000589991.1	625	4	-14	39	-12	-39	multi-exon	FALSE	canonical	3	353	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGGCAAATTTGTGTT	16197339	True	NA	NA	False	NA	NA	NA	16197898	16208223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018
WTC11_00049342	chr19	+	537	2	Genic_Genomic	ENSG00000269399.2	novel	2069	1	NA	NA	-184	-6	multi-exon	FALSE	canonical	2	3	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCCCAGTCTCAGGT	16542400	True	NA	13	True	AATAAA	-14	NA	16542561	16544808	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_16542680_16544389
WTC11_00049344	chr19	+	3712	3	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-37	2146	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	68.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTCCATTTTCTTTC	17071857	True	NA	11	True	AATAAA	-21	NA	17075739	17105935	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17103256
WTC11_00049352	chr19	+	986	4	FSM	ENSG00000130299.17	ENST00000594345.5	1004	4	18	0	-14	0	multi-exon	FALSE	canonical	2	11	junction_1	131.302026725494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTCCCCCATTTGTCCA	17335760	True	NA	NA	False	NA	NA	NA	17336709	17338741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337158_17338007_17338256_17338364_17338452_17338538
WTC11_00049355	chr19	+	2513	5	FSM	ENSG00000130304.17	ENST00000599380.5	2596	5	-4	87	0	-87	multi-exon	FALSE	canonical	1	1	junction_1	12.0701077045733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTCTCTATGGCCCGGT	17470022	True	NA	-83	True	NA	NA	NA	17470523	17499311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17470708_17487459_17487530_17488847_17488940_17489007_17489118_17497254
WTC11_00049356	chr19	+	3088	11	NIC	ENSG00000130304.17	novel	3514	12	NA	NA	19	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	8.98276126811795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGCTGGGAGCCCATT	17470055	True	NA	24	True	AATAAA	-16	NA	17470556	17506170	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17470708_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
WTC11_00049358	chr19	+	747	7	FSM	ENSG00000130475.15	ENST00000599766.5	747	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	62.2666755888645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGAGCCCTGTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	17776156	17781722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711
WTC11_00049359	chr19	+	1598	9	NIC	ENSG00000130475.15	novel	2979	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	57.6866535690882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	17777449	True	NA	14	True	AATAAA	-38	NA	17778472	17788562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17778885_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
WTC11_00049360	chr19	+	403	4	FSM	ENSG00000105641.4	ENST00000597109.1	573	4	170	0	170	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCTATCTCTATTACG	17882002	False	NA	NA	False	NA	NA	NA	17882148	17888378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17882220_17883680_17883768_17883849_17884047_17888330
WTC11_00049361	chr19	+	3500	10	NIC	ENSG00000105642.16	novel	3603	12	NA	NA	3	-52	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	14.2204860051344	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAACTGGTAGGTGCTC	17951959	True	NA	-40	True	AAAAAG	-4	NA	17952260	18000028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989819_17993489_17993560_17998151
WTC11_00049362	chr19	+	1317	4	ISM	ENSG00000105642.16	ENST00000683930.1	3563	11	2	17824	2	-6264	5prime_fragment	FALSE	canonical	3	17	junction_1	16.2685791225499	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGGTGCCTCCTGTCT	17966666	True	NA	NA	False	NA	NA	NA	17967132	17982261	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708
WTC11_00049363	chr19	+	2501	8	FSM	ENSG00000105643.11	ENST00000222250.5	2501	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	11.7837660727436	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCTTCTTGGTTTATT	18008071	True	NA	9	True	AGTAAA	-16	NA	18008169	18014102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18008585_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
WTC11_00049367	chr19	+	418	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	-20	17	-16	-17	multi-exon	FALSE	canonical	0	0	junction_2	1.5	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCGACTTAAAGCAACAA	18204634	True	NA	NA	False	GGGGCT	-32	NA	18204713	18209029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18204900_18208289_18208430_18208937
WTC11_00049368	chr19	+	1240	6	FSM	ENSG00000130517.14	ENST00000596962.5	1237	6	-3	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_2	11.8591736642989	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCAATGCGTCCTCGA	18337897	True	NA	NA	False	TTTAAA	-2	NA	18340607	18363998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18340716_18342858_18342912_18348947_18349069_18355894_18356012_18357382_18357616_18363390
WTC11_00049370	chr19	+	1696	17	NNC	ENSG00000130511.16	novel	1721	17	NA	NA	-21	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	93.3251833309209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18417018	True	NA	26	True	AATAAA	-26	NA	18419376	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432683_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
WTC11_00049371	chr19	+	606	7	FSM	ENSG00000130511.16	ENST00000601357.6	606	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	121.984971751988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCCTCCCCACGAGCC	18417067	True	NA	NA	False	NA	NA	NA	18419425	18431838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18419616_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792
WTC11_00049372	chr19	+	1612	17	NIC	ENSG00000130511.16	novel	1725	18	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	106.377790797704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18417090	True	NA	26	True	AATAAA	-26	NA	18419448	18434562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18419708_18427350_18427424_18427897_18427983_18430840_18430931_18431352_18431419_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
WTC11_00049373	chr19	+	1333	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	-6	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	415.000048192768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	18538604	True	NA	-31	True	NA	NA	NA	18557869	18569310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
WTC11_00049374	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2895.88842326496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	18450214	True	NA	27	True	AATAAA	-17	NA	18571854	18575229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
WTC11_00049375	chr19	+	1834	10	FSM	ENSG00000105662.16	ENST00000601916.1	1834	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	20.9549781940023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTTGACGGCTGTCTT	NA	False	NA	2	True	AATAAA	-2	NA	18742909	18777938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18775640_18775822_18777170
WTC11_00049376	chr19	+	1252	6	FSM	ENSG00000105676.14	ENST00000539985.5	1252	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	207.111564138751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCCTGCGTGTCAT	19030260	True	NA	NA	False	NA	NA	NA	19033639	19052068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19037551_19037708_19042710_19042878_19043991_19044075_19051621
WTC11_00049377	chr19	+	1362	10	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	33	junction_1	102.326758143209	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192031	False	NA	6	True	AATAAA	-15	NA	19192268	19201866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19192555_19192959_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
WTC11_00049379	chr19	+	5840	13	NIC	ENSG00000167491.18	novel	5714	12	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	231.080117780248	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTTGTCCCTTCT	NA	False	NA	17	True	AATAAA	-20	NA	19405636	19508931	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19406020_19436130_19436220_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
WTC11_00049381	chr19	+	1075	8	FSM	ENSG00000258674.5	ENST00000586674.1	1071	8	-4	0	-2	0	multi-exon	FALSE	canonical	1	3	junction_6	4761.21157621349	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCCTCCTTTCTCTC	19476256	True	NA	NA	False	NA	NA	NA	19516224	19533476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006_19528117_19529363_19529518_19532631_19532741_19533103
WTC11_00049382	chr19	+	3562	5	ISM	ENSG00000250067.12	ENST00000458210.7	2785	6	2869	-6	2840	3	3prime_fragment	FALSE	canonical	1	40	junction_1	29.9207286007544	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCCTCCGCCTCCTTT	19531667	False	NA	7	True	AATAAA	-20	NA	19531750	19537584	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_19532741_19533103_19535145_19535336_19535451_19535528_19535680_19537318
WTC11_00049383	chr19	+	553	1	FSM	ENSG00000270325.1	ENST00000603714.1	553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAAATAGAAACTGA	NA	False	NA	NA	False	AATACA	-27	NA	19856974	19857527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19857000_19857500
WTC11_00049384	chr19	+	7543	5	NNC	ENSG00000213988.11	novel	1918	6	NA	NA	-49	341	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	121.674771419551	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCATCATGACTATCAAAA	20068726	True	NA	-47	True	NA	NA	NA	20077944	20125484	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_20078136_20104238_20104366_20105220_20105317_20114696_20121347_20125005
WTC11_00049385	chr19	+	385	1	FSM	ENSG00000270716.1	ENST00000604600.1	301	1	-156	72	-156	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGCTTCTGAAACAGACA	NA	False	NA	NA	False	NA	NA	NA	20136776	20137161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20136800_20137200
WTC11_00049386	chr19	+	1551	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-18	1480	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	41.2148840428633	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTTGAATCAGAGTG	20163499	True	NA	7	True	AATAAA	-21	NA	20167195	20190256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189093
WTC11_00049387	chr19	+	537	1	FSM	ENSG00000268174.1	ENST00000593399.1	556	1	-167	186	-167	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCTAAACACCCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	20416346	20416883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20416300_20416900
WTC11_00049388	chr19	+	946	2	Genic_Genomic	ENSG00000289297.1	novel	564	1	NA	NA	14	2726	multi-exon	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGATACTTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	20999944	21003220	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_21000574_21002903
WTC11_00049389	chr19	+	4251	6	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	0	1470	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	23.777300099044	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTGTTGTTGT	21074460	True	NA	14	True	AATAAA	-14	NA	21082249	21126740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116828_21118886_21124960
WTC11_00049390	chr19	+	985	6	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	19.4792196968975	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATCAACCACATTGTC	21136661	True	NA	5	True	AATAAA	-14	NA	21142023	21190221	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21182622_21182769_21189864
WTC11_00049392	chr19	+	5353	7	Fusion	ENSG00000268995.1_ENSG00000196705.8	novel	1971	6	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	24.9377001523575	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGTTTCTATGGTTA	21136714	True	NA	NA	False	NA	NA	NA	21142076	21188953	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622_21186003_21187431
WTC11_00049394	chr19	+	1445	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	-10	101	4	-57	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTCCTAACTGCTATTT	21395220	True	NA	-50	True	AAAAAG	-8	NA	21397122	21414542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
WTC11_00049395	chr19	+	5498	9	NIC	ENSG00000268658.5	novel	3029	14	NA	NA	2637	45	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	8.73122986755016	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAACATGTGGCTGTG	NA	False	NA	2	True	CATAAA	-4	NA	21486351	21503283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21488457_21489664_21489771_21490402_21490515_21490988_21491103_21491208_21491312_21493265_21493848_21494119_21494332_21498198_21498350_21501270
WTC11_00049396	chr19	+	4245	5	FSM	ENSG00000213096.11	ENST00000613065.4	4244	5	-1	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_2	62.1424774208431	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	24028639	True	NA	2	True	ATTAAA	-34	NA	24033403	24129961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24046183_24046280_24105939_24106067_24106547_24106644_24126253
WTC11_00049399	chr19	+	747	1	Genic_Genomic	ENSG00000268362.6	novel	NA	NA	NA	NA	-261	-3847	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTGTTGTTTTAGATT	24047981	False	NA	NA	False	NA	NA	NA	24047994	24048741	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_24048000_24048700
WTC11_00049400	chr19	+	1977	1	FSM	ENSG00000276030.1	ENST00000620377.1	381	1	-1598	2	-1598	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGCTATCTTGCTTAT	NA	False	NA	6	True	AATAAA	-17	NA	24145102	24147079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24145100_24147100
WTC11_00049401	chr19	+	1817	3	FSM	ENSG00000267575.8	ENST00000592404.6	1796	3	-21	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	NA	False	NA	NA	False	AATAGA	-11	NA	27793430	27800391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27793651_27797753_27798177_27799217
WTC11_00049404	chr19	+	803	1	FSM	ENSG00000276251.1	ENST00000618791.1	803	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTCTCCACCAAATAAA	29220839	False	NA	NA	False	AATAAA	-21	NA	29220863	29221666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29220900_29221700
WTC11_00049406	chr19	+	2028	3	NNC	ENSG00000166289.6	novel	1699	2	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGAGTGTCCTTGCT	29663282	True	NA	27	True	AATAAA	-34	NA	29665419	29675475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_29665506_29666890_29667181_29673823
WTC11_00049407	chr19	+	2058	12	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	101.731781523282	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTTTATGAGCTATGT	29809324	True	NA	20	True	AATAAA	-22	NA	29811877	29824312	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812531_29812579_29812688_29812777_29812977_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
WTC11_00049408	chr19	+	1758	10	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	129.115796434398	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTTTTATGAGCTATG	29809450	True	NA	19	True	AATAAA	-21	NA	29812003	29824311	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
WTC11_00049409	chr19	+	529	3	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTATAGAGAATT	31349222	True	NA	7	True	ATTAAA	-17	NA	31349770	31368187	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_31349846_31367531_31367642_31367843
WTC11_00049410	chr19	+	2813	3	NNC	ENSG00000267662.1	novel	560	4	NA	NA	68719	3512	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	1	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTTGACAGATAGATGCA	NA	False	NA	115	True	NA	NA	NA	31417599	31421306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_31417833_31418111_31420496_31421110
WTC11_00049412	chr19	+	1381	1	ISM	ENSG00000213965.4	ENST00000397061.4	3103	3	20591	0	20591	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATTAGAGAACTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	32712411	32713792	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_32712400_32713800
WTC11_00049413	chr19	+	503	5	FSM	ENSG00000173809.18	ENST00000639142.1	503	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTCAAGAGCGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	32826097	32827267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32826162_32826243_32826358_32826444_32826599_32826682_32826750_32827163
WTC11_00049415	chr19	+	1737	7	FSM	ENSG00000076650.7	ENST00000592262.1	1978	7	241	0	241	0	multi-exon	FALSE	canonical	3	54	junction_2	21.2733531808118	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTCTTGATTTTTAA	NA	False	NA	9	True	ATTAAA	-14	NA	33113179	33130406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
WTC11_00049416	chr19	+	3119	3	FSM	ENSG00000130881.14	ENST00000590278.1	3278	3	159	0	159	0	multi-exon	FALSE	canonical	3	354	junction_1	23.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTCTGCGTCCTTT	33204018	False	NA	18	True	AATACA	-12	NA	33204028	33207639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33206363_33206600_33206734_33206987
WTC11_00049417	chr19	+	2510	1	FSM	ENSG00000267296.2	ENST00000592982.2	2198	1	-146	-166	-146	166	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGAGAAATAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	33302710	33305220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33302700_33305200
WTC11_00049418	chr19	+	3555	11	NNC	ENSG00000257103.9	novel	3424	11	NA	NA	-95	12714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	302.205708086396	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAAAAAAACACT	NA	False	NA	NA	False	AAAACA	-7	NA	34172408	34242002	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364_34229286_34241970
WTC11_00049419	chr19	+	2322	10	NNC	ENSG00000257103.9	novel	3431	10	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_7	302.186640062228	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTGTCCTTGCAGAA	NA	False	NA	10	True	AATAAA	-19	NA	34172417	34228096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219708_34219878_34221506_34221739_34227364
WTC11_00049422	chr19	+	499	3	FSM	ENSG00000126261.13	ENST00000592672.2	353	3	-125	-21	-125	0	multi-exon	FALSE	canonical	3	806	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGAGTGTATATTTCT	34433097	False	NA	NA	False	NA	NA	NA	34433134	34438764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34433413_34434867_34434969_34438644
WTC11_00049423	chr19	+	2659	6	NIC	ENSG00000168661.15	novel	2579	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	7.65767588763066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	34926415	True	NA	1	True	AATAAA	-16	NA	34926902	34945164	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34942593_34942674_34943222
WTC11_00049426	chr19	+	1425	2	FSM	ENSG00000179066.8	ENST00000648691.1	1429	2	4	0	4	0	multi-exon	FALSE	canonical	2	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCACAACTATTGTCATC	35090910	False	NA	NA	False	NA	NA	NA	35090933	35105736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35091121_35104498
WTC11_00049427	chr19	+	400	2	Fusion	ENSG00000179066.8_ENSG00000285526.1	novel	1429	2	NA	NA	54	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGCTCTGGCTTTGAT	35090933	False	NA	11	True	AATAAA	-21	NA	35091038	35113664	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_35091121_35113346
WTC11_00049430	chr19	+	1595	10	NIC	ENSG00000126254.12	novel	1692	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	251.569296837096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	35614619	True	NA	-28	True	NA	NA	NA	35629067	35637641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
WTC11_00049431	chr19	+	435	4	FSM	ENSG00000126267.11	ENST00000392201.1	435	4	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_1	3269.2244748054	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAGGATCCTAAATCAT	35577579	False	NA	-27	True	NA	NA	NA	35648824	35658726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35648909_35651232_35651350_35654570_35654672_35658593
WTC11_00049432	chr19	+	624	2	FSM	ENSG00000126267.11	ENST00000652250.1	785	2	161	0	161	0	multi-exon	FALSE	canonical	3	7364	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTACCAGCGTGTGTA	35579536	False	NA	NA	False	NA	NA	NA	35650781	35654626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35651350_35654570
WTC11_00049433	chr19	+	795	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6705	-12	6705	-6	3prime_fragment	FALSE	canonical	3	24	junction_1	7.1336448530109	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATGAGTTTTTTTT	35673152	False	NA	NA	False	AATAAA	-16	NA	35673517	35678477	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
WTC11_00049434	chr19	+	8467	37	FSM	ENSG00000272333.8	ENST00000420124.4	8485	37	18	0	18	0	multi-exon	TRUE	canonical	1	2	junction_4	27.5802980314966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTCTTCCCATTTGT	35715653	False	NA	17	True	AATAAA	-18	NA	35718020	35738878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35718382_35719468_35719542_35719783_35721805_35722358_35722473_35722567_35722719_35722994_35723275_35723446_35723503_35723731_35724008_35724636_35724732_35724988_35725088_35725219_35725334_35725478_35725626_35725722_35725819_35726235_35726354_35727155_35727270_35727437_35727623_35727697_35727788_35727880_35727986_35728097_35728172_35728773_35728890_35728984_35729077_35729158_35729297_35729966_35730126_35730341_35730463_35730537_35730617_35730706_35730868_35731907_35732136_35732214_35733509_35733596_35733687_35733762_35733873_35736689_35736828_35736911_35736987_35737085_35737264_35737635_35737744_35737858_35737943_35738061_35738192_35738281
WTC11_00049435	chr19	+	1037	11	FSM	ENSG00000188223.9	ENST00000591613.2	1037	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	425.702760150789	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35741973	True	NA	4	True	AGTAAA	-18	NA	35745677	35754519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
WTC11_00049436	chr19	+	660	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	-10	616	0	-2	multi-exon	TRUE	canonical	3	21	junction_1	8.30662386291807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCAGTGGCTCACACC	35755878	True	NA	NA	False	NA	NA	NA	35758168	35762429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
WTC11_00049437	chr19	+	2871	13	NNC	ENSG00000167595.15	novel	2149	11	NA	NA	0	865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	11.1567119807864	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCATTTACAAAATGGAG	35755878	True	NA	-79	True	AATAAA	-36	NA	35758168	35771893	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252_35762357_35764853_35764937_35765033_35765177_35766767_35766956_35767071_35768066_35768154_35768237_35768403_35768570_35768764_35769299_35771802
WTC11_00049440	chr19	+	2943	9	ISM	ENSG00000004777.19	ENST00000378944.9	4219	21	7082	0	-28	0	3prime_fragment	FALSE	canonical	2	10	junction_2	19.2288845230294	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35782559	False	NA	20	True	AATAAA	-15	NA	35782596	35788822	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167_35787560_35787643
WTC11_00049441	chr19	+	2855	6	ISM	ENSG00000004777.19	ENST00000378944.9	4219	21	9189	0	-128	0	3prime_fragment	FALSE	canonical	3	39	junction_3	9.06421535489973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35784655	False	NA	20	True	AATAAA	-15	NA	35784703	35788822	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167_35787560_35787643
WTC11_00049442	chr19	+	2269	15	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	45.3128017231334	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870323	False	NA	6	True	AATAAA	-17	NA	35870370	35879792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35870651_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878583_35878655_35878889_35878953_35879073_35879218_35879342
WTC11_00049443	chr19	+	4663	32	FSM	ENSG00000075702.19	ENST00000680590.1	4655	32	-8	0	8	0	multi-exon	TRUE	canonical	3	7	junction_22	62.1784883385786	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	36048496	True	NA	12	True	AATAAA	-18	NA	36054888	36105108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083189_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100751_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00049444	chr19	+	4221	28	NIC	ENSG00000075702.19	novel	4478	30	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	67.7670503552766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTCCTGGTGTCTGTTT	36048528	True	NA	11	True	AATAAA	-17	NA	36054920	36105107	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
WTC11_00049448	chr19	+	1653	1	FSM	ENSG00000267309.1	ENST00000592087.1	1392	1	38	-299	38	299	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGGGTCAGCCCCCCG	36489548	False	NA	NA	False	NA	NA	NA	36489686	36491339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36489700_36491300
WTC11_00049451	chr19	+	3172	5	NIC	ENSG00000161298.19	novel	8336	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	7.53325958665968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAACGTGACATTG	36604496	True	NA	NA	False	AATATA	-42	NA	36605312	36628567	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36605731_36607551_36607623_36609901_36610054_36610649_36610743_36626129
WTC11_00049452	chr19	+	234	1	FSM	ENSG00000276071.1	ENST00000611182.1	1303	1	652	417	652	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGGCTTTTTTTCTT	36668212	False	NA	NA	False	NA	NA	NA	36668753	36668987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36668800_36669000
WTC11_00049453	chr19	+	2714	5	NIC	ENSG00000189042.14	novel	2802	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	26.4799452416352	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTTGTTTATATCA	36686183	True	NA	10	True	AATAAA	-12	NA	36687609	36721321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36687635_36689396_36689498_36712385_36712513_36712780_36712868_36718947
WTC11_00049454	chr19	+	2761	5	ISM	ENSG00000189042.14	ENST00000536254.6	2825	6	1772	6	0	0	3prime_fragment	FALSE	canonical	3	55	junction_1	15.2397506541282	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTTGTTTATATCA	36688614	False	NA	10	True	AATAAA	-12	NA	36689399	36721321	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
WTC11_00049456	chr19	+	449	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	-2	-11008	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.0388511535855	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTTTGCTAGAGTTT	36850114	True	NA	NA	False	CATAAA	-21	NA	36850927	36866046	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
WTC11_00049458	chr19	+	3634	6	NIC	ENSG00000197050.11	novel	571	6	NA	NA	20	1	intron_retention	FALSE	canonical	1	1	junction_4	32.7694980126336	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGATGCTATTGTAGT	37077289	True	NA	8	True	AATAAA	-14	NA	37078465	37130311	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37096030_37096116_37127127
WTC11_00049459	chr19	+	3111	7	NNC	ENSG00000188283.12	novel	6732	6	NA	NA	-45	1060	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.58152156786987	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGCAGCTATAAAA	37217986	False	NA	58	True	TTTAAA	-28	NA	37218137	37244981	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_37218275_37219687_37219750_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
WTC11_00049460	chr19	+	2947	8	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	3	0	intron_retention	FALSE	canonical	2	8	junction_5	55.0628583288857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGACTTGTATCTCCAT	37313770	True	NA	NA	False	NA	NA	NA	37317906	37363929	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37325275_37347189_37347317_37347776_37347873_37362108
WTC11_00049461	chr19	+	3064	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	58.171203261484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTCAATTGTCAGTGT	37313786	True	NA	19	True	AATAAA	-20	NA	37317922	37364445	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37323532_37323571_37324207_37324266_37324795_37324937_37347189_37347317_37347776_37347873_37362105
WTC11_00049462	chr19	+	412	3	ISM	ENSG00000181666.19	ENST00000324411.8	2929	6	-30	19658	-1	0	5prime_fragment	FALSE	canonical	1	1	junction_2	22	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAATTGCTCTGTGATG	37333591	True	NA	NA	False	ATTAAA	-13	NA	37334647	37344797	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_37334783_37335168_37335258_37344609
WTC11_00049466	chr19	+	1540	1	FSM	ENSG00000171817.17	ENST00000589285.1	3106	1	1005	561	1005	145	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTGCTTCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	37611992	37613532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37612000_37613500
WTC11_00049468	chr19	+	204	1	FSM	ENSG00000269653.1	ENST00000594299.1	1890	1	406	1280	406	-1280	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGGCCTCTTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	38184781	38184985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38184800_38185000
WTC11_00049470	chr19	+	396	3	FSM	ENSG00000099338.23	ENST00000477793.2	653	3	251	6	251	-6	multi-exon	FALSE	canonical	1	1	junction_2	1.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGCATGTGACACCAC	38337122	False	NA	NA	False	NA	NA	NA	38337278	38337855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38337505_38337592_38337647_38337739
WTC11_00049471	chr19	+	200	2	FSM	ENSG00000099338.23	ENST00000475646.1	452	2	244	8	166	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGAATATGGCAGGGG	38343836	False	NA	NA	False	NA	NA	NA	38343992	38344368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38344120_38344295
WTC11_00049472	chr19	+	4528	5	FSM	ENSG00000188766.13	ENST00000338502.8	4778	5	191	59	92	-59	multi-exon	FALSE	canonical	1	1	junction_3	5.80409338312195	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATCGGGGGAGGGGGC	38390048	False	NA	-49	True	NA	NA	NA	38390390	38399528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38390480_38391945_38392115_38392211_38392289_38394642_38394787_38395479
WTC11_00049475	chr19	+	1676	14	ISM	ENSG00000196218.14	ENST00000689936.1	3422	22	29087	-139	1568	-4	3prime_fragment	FALSE	canonical	3	15	junction_2	8.26484678065433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCACTGTGTTGGCCT	NA	False	NA	1	True	AATAAA	-17	NA	38566966	38587559	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_38566988_38567772_38567918_38572018_38572271_38573176_38573308_38575918_38575962_38577917_38578049_38578143_38578205_38579981_38580129_38580369_38580505_38584942_38585100_38585937_38586003_38586090_38586192_38586524_38586577_38587324
WTC11_00049482	chr19	+	4940	14	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_1	248.004771857126	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	39338400	True	NA	7	True	AAAACA	-14	NA	39342467	39385698	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39342577_39348287_39348390_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
WTC11_00049486	chr19	+	2244	13	NIC	ENSG00000105223.20	novel	1906	13	NA	NA	4	1	intron_retention	FALSE	canonical	3	78	junction_1	432.223988678196	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCCTGACTGAGTG	40343130	True	NA	15	True	AGTAAA	-15	NA	40348707	40378484	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348725_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
WTC11_00049492	chr19	+	1447	7	NIC	ENSG00000090006.18	novel	1700	8	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	102.889368849372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40613685	True	NA	14	True	ATTAAA	-15	NA	40614149	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40627704_40627858_40629395
WTC11_00049493	chr19	+	1854	9	NIC	ENSG00000090006.18	novel	2446	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	13	junction_2	87.0341168737869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	40613731	True	NA	14	True	ATTAAA	-15	NA	40614195	40629816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614447_40619346_40619494_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
WTC11_00049512	chr19	+	4362	1	FSM	ENSG00000267680.6	ENST00000591551.1	2994	1	132	-1500	132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTTGAGTGTTTACA	NA	False	NA	5	True	AATAAA	-18	NA	44105464	44109826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44105500_44109800
WTC11_00049514	chr19	+	2788	7	FSM	ENSG00000167380.17	ENST00000590089.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	58.4570117455744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCGTGTCATTTGAAT	44163877	True	NA	17	True	TATAAA	-14	NA	44165154	44177683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165247_44165756_44165808_44166704_44166883_44170034_44170096_44172087_44172215_44172859_44172953_44175497
WTC11_00049535	chr19	+	2010	13	NIC	ENSG00000124440.16	novel	2101	13	NA	NA	89	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	37.0615104327327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	46303922	False	NA	NA	False	AATAAA	-13	NA	46303937	46338538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
WTC11_00049536	chr19	+	2301	3	FSM	ENSG00000160014.17	ENST00000486500.1	2536	3	235	0	235	0	multi-exon	FALSE	canonical	3	3515	junction_2	321	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGCTCCTCTCCTCCTG	46607896	True	NA	31	True	AATAAA	-17	NA	46608196	46610781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46608341_46608481_46608982_46609124
WTC11_00049538	chr19	+	1655	10	FSM	ENSG00000130751.10	ENST00000602189.5	1643	10	-12	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.0929936809259	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGAGAATTAAACGCCG	47019694	True	NA	-22	True	NA	NA	NA	47019836	47045727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47019998_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039403_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
WTC11_00049539	chr19	+	1411	8	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	12.1638474042331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGCTCCGGGCTGTGA	47035041	True	NA	13	True	ATTAAA	-21	NA	47035309	47045762	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
WTC11_00049541	chr19	+	2678	10	FSM	ENSG00000142230.13	ENST00000660039.1	2673	10	-5	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	1246.79477456258	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATTCTGATCCTGCA	47101847	True	NA	9	True	AATAAA	-9	NA	47130860	47210623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47156986_47157182_47169817_47169924_47197232_47197378_47203670_47203741_47209158
WTC11_00049546	chr19	+	1950	1	FSM	ENSG00000063169.12	ENST00000602258.1	3312	1	1363	-1	1363	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCCCCTTGGCCCAT	NA	False	NA	11	True	ATTAAA	-26	NA	47701327	47703277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47701300_47703300
WTC11_00049558	chr19	+	846	1	FSM	ENSG00000063176.16	ENST00000598574.1	1786	1	-649	1589	37	-950	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTGCCTTTCTCGTTG	48622614	True	NA	NA	False	NA	NA	NA	48624379	48625225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48624400_48625200
WTC11_00049569	chr19	+	3526	11	Fusion	ENSG00000142552.8_ENSG00000104870.13	novel	1559	6	NA	NA	8	0	intron_retention	FALSE	canonical	1	12	junction_5	49.0004081615653	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49512807	False	NA	14	True	AATAAA	-15	NA	49513204	49543633	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009_49526259_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
WTC11_00049572	chr19	+	731	6	NIC	ENSG00000126453.10	novel	1371	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	476.263624477033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTTGCCAAAAATAAAT	49650841	True	NA	-28	True	NA	NA	NA	49665932	49673859	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49666068_49666684_49666800_49667021_49667162_49668850_49668938_49669023_49669116_49673697
WTC11_00049573	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1916.40330828351	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49675703	False	NA	27	True	AATAAA	-13	NA	49675896	49688447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
WTC11_00049577	chr19	+	2474	18	NIC	ENSG00000169169.15	novel	2783	19	NA	NA	131	0	intron_retention	FALSE	canonical	3	27	junction_14	79.0104456324045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49691255	True	NA	21	True	AATAAA	-16	NA	49691283	49713731	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49711808_49711962_49712735_49712850_49712971_49713065_49713419
WTC11_00049580	chr19	+	1875	12	FSM	ENSG00000104960.15	ENST00000391842.5	1875	12	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	128.193358603645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGCCTGCCTTCTC	49842983	True	NA	20	True	AATAAA	-8	NA	49851158	49860733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267
WTC11_00049581	chr19	+	2046	3	FSM	ENSG00000283842.1_ENSG00000169136.13	ENST00000596658.1	722	3	14	-1338	14	35	multi-exon	FALSE	canonical	2	5	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCGGCCTTGTAATCTC	49930104	True	NA	46	True	NA	NA	NA	49930232	49933970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49930433_49930731_49931029_49932421
WTC11_00049588	chr19	+	2467	7	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	0	143	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	54.3343558185999	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGACTGGGAAATTCT	51926304	True	NA	NA	False	AATAAA	-44	NA	51927471	51945895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_51927541_51927894_51927995_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
WTC11_00049604	chr19	+	1775	3	NIC	ENSG00000130844.19	novel	1021	6	NA	NA	8	-937	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	104.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCACTTTTTTTTTTTTT	53516959	True	NA	NA	False	AATAGA	-23	NA	53521031	53535794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_53522085_53522616_53522685_53535140
WTC11_00049607	chr19	+	3266	4	NNC	ENSG00000179820.16	novel	1579	3	NA	NA	14	2215	intron_retention	FALSE	non_canonical	0	0	junction_3	127.334205930692	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	53865167	True	NA	NA	False	NA	NA	NA	53866171	53878650	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_53866418_53869753_53869839_53873527_53876432_53878619
WTC11_00049619	chr19	+	483	5	NNC	ENSG00000108107.15	novel	4209	5	NA	NA	0	10122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2761.86851379641	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAATGGACTTCGGGGA	55385500	True	NA	NA	False	NA	NA	NA	55386349	55413372	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_55386439_55386569_55386694_55387929_55388049_55388242_55388369_55413347
WTC11_00049621	chr19	+	1297	1	FSM	ENSG00000213015.9	ENST00000543039.2	1707	1	411	-1	77	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTCTTCCTTGCG	55642129	False	NA	15	True	AATAAA	-15	NA	55642173	55643470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55642200_55643500
WTC11_00049625	chr19	+	1213	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	-30	161	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	9.19238815542512	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAACGGCTAAAAATAAAAA	56393079	False	NA	NA	False	NA	NA	NA	56393780	56399333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276_56398384_56398893
WTC11_00049635	chr19	+	1038	4	NNC	ENSG00000152443.13	novel	5262	3	NA	NA	22	6810	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	31.6684210040363	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTATTAGCTGCTGTTT	57743918	True	NA	NA	False	AATAAA	-38	NA	57746862	57764958	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_57747092_57750784_57750912_57756871_57756999_57764403
WTC11_00049639	chr19	+	2707	1	ISM	ENSG00000198466.12	ENST00000339656.8	6885	3	12544	8	1118	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAAAGATTCATACCTC	57862392	False	NA	8	True	ATTAAA	-20	NA	57862402	57865109	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_57862400_57865100
WTC11_00049644	chr19	+	735	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	0	-2649	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	89.1654205520404	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCATTTGTGGTATGTTG	58229450	False	NA	11	True	AATAAA	-18	NA	58229467	58274598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58271749_58271777_58274365
WTC11_00049645	chr19	+	2482	8	NIC	ENSG00000283515.1	novel	3042	12	NA	NA	3	9074	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	84.9986794615309	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGTACTGACTTGGTGC	58229450	False	NA	23	True	ATTAAA	-36	NA	58229467	58295881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58285716_58285844_58286109_58286206_58294097
WTC11_00049646	chr19	+	790	7	NNC	ENSG00000198131.15	novel	895	7	NA	NA	3	-2647	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	93.5439587692451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTTGTGGTATGTTGTT	58229456	False	NA	13	True	AATAAA	-20	NA	58229473	58274600	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58229571_58230393_58230463_58237248_58237335_58243964_58244057_58246300_58246428_58246710_58246795_58274365
WTC11_00049647	chr19	+	2432	3	FSM	ENSG00000268895.6	ENST00000670199.1	2412	3	-20	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATACCTAGTGTGGTT	58351597	False	NA	1	True	NA	NA	NA	58351969	58355151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58353475_58353713_58353858_58354368
WTC11_00049652	chr19	+	2319	4	FSM	ENSG00000171574.18	ENST00000306910.9	2308	4	-11	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_1	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408474	False	NA	27	True	AATAAA	-27	NA	58408637	58418327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58409166_58409940_58410092_58415523_58415647_58416810
WTC11_00049654	chr19	+	2949	17	NNC	ENSG00000130726.12	novel	3364	17	NA	NA	3	0	intron_retention	TRUE	canonical	1	54	junction_12	783.520597906494	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58498947	True	NA	34	True	AATAAA	-14	NA	58544475	58550715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549333_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
WTC11_00049657	chr19	-	714	2	FSM	ENSG00000282458.1	ENST00000631796.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	-68448	True	NA	NA	False	TATAAA	-16	NA	70963	65821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_66500_70927
WTC11_00049658	chr19	-	2953	6	Fusion	ENSG00000282416.1_ENSG00000282508.2	novel	754	5	NA	NA	-66	391	intron_retention	TRUE	canonical	0	0	junction_1	60.3171617369385	60	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCGCCCACGATCAACG	NA	False	NA	NA	False	AATGAA	-2	NA	206012	196918	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_197807_200922_201663_201755_201814_203874_204066_204843_205077_205169
WTC11_00049659	chr19	-	449	2	FSM	ENSG00000282508.2	ENST00000632790.1	449	2	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTCGCGGTGGGGCGA	-200483	False	NA	NA	False	NA	NA	NA	200507	198263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_198596_200390
WTC11_00049665	chr19	-	565	1	FSM	ENSG00000272473.1	ENST00000606966.1	861	1	231	65	231	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGCAACGGCCCCAT	-781594	False	NA	NA	False	NA	NA	NA	781631	781066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_781100_781600
WTC11_00049666	chr19	-	362	4	FSM	ENSG00000129951.19	ENST00000517665.2	362	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	165.644867781112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGGGGCCCCCAGGGC	-810806	False	NA	NA	False	NA	NA	NA	814911	813755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_813896_814433_814572_814691_814750_814885
WTC11_00049667	chr19	-	1768	9	NNC	ENSG00000198858.10	novel	1803	8	NA	NA	0	46817	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	215.935428716549	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGCTTTGAGAGCTGG	-906624	True	NA	NA	False	AAAAAG	-3	NA	913151	849685	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_849718_896501_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
WTC11_00049668	chr19	-	1765	9	NNC	ENSG00000198858.10	novel	1803	8	NA	NA	0	46817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.935428716549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGCTTTGAGAGCTGG	-906624	True	NA	NA	False	AAAAAG	-3	NA	913151	849685	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_849718_896504_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
WTC11_00049669	chr19	-	2627	11	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	266	junction_4	311.658932167843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1006113	True	NA	-31	True	AATAAA	-17	NA	1021114	1009652	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011613_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
WTC11_00049676	chr19	-	2457	8	NNC	ENSG00000071655.18	novel	5518	7	NA	NA	0	52294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.804720770369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGCCGAGCCCTGTGG	-1589058	True	NA	NA	False	NA	NA	NA	1592801	1521301	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1521323_1576677_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
WTC11_00049677	chr19	-	1181	7	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	163	junction_1	389.519112353796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCAGTCCCCGGGT	-1619792	False	NA	-9	True	AATAAA	-18	NA	1619853	1609293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779
WTC11_00049678	chr19	-	2743	18	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_5	237.194895992981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGTAAACCTGAGCCC	-1650224	False	NA	-15	True	ATTAAA	-17	NA	1650287	1610964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176
WTC11_00049680	chr19	-	2265	18	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	83	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_15	306.508025262265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTCTTAATGTAG	-1652445	False	NA	-43	True	AATAAA	-17	NA	1652508	1611167	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1646354_1646428_1650176_1650288_1652299
WTC11_00049681	chr19	-	2660	17	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	-35	0	intron_retention	FALSE	canonical	3	144	junction_14	263.976679841231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATTCTTCTAAAGCCAC	-1642972	True	NA	-124	True	NA	NA	NA	1652650	1611248	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1646354_1646428_1650176_1650288_1652299
WTC11_00049682	chr19	-	2564	9	NNC	ENSG00000130270.16	novel	5095	29	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	10.6507042020704	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTCTTTCCCT	-1790720	True	NA	-22	True	AATAAA	-28	NA	1790869	1782074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789701_1789889_1789990_1790756
WTC11_00049684	chr19	-	1564	6	NNC	ENSG00000129968.17	novel	1781	6	NA	NA	0	6885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.522780416213	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTATCTTGGGTTGGGT	-1883061	True	NA	NA	False	AAAAAG	-6	NA	1885496	1869924	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1869951_1876977_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
WTC11_00049686	chr19	-	243	1	FSM	ENSG00000279653.1	ENST00000623695.1	1002	1	915	-156	915	156	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGAGCTTGATAATTAG	NA	False	NA	NA	False	ACTAAA	-22	NA	2002666	2002423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2002400_2002700
WTC11_00049687	chr19	-	222	1	FSM	ENSG00000275468.1	ENST00000615016.1	929	1	435	272	435	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGTAACCCCCAACCTA	-2012744	False	NA	NA	False	NA	NA	NA	2014221	2013999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2014000_2014200
WTC11_00049688	chr19	-	3918	13	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	341	junction_12	53.5677141569435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCCTGAGTTTTAG	-2042167	True	NA	-11	True	AATAAA	-14	NA	2051244	2037472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046692_2050800_2050948_2051095
WTC11_00049689	chr19	-	1911	13	NIC	ENSG00000099875.16	novel	1744	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	170	junction_1	94.2934250093823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCCTGAGTTTTAG	-2042187	True	NA	-11	True	AATAAA	-14	NA	2051264	2037472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046692_2050800_2050948_2051095
WTC11_00049690	chr19	-	5044	33	NNC	ENSG00000065000.19	novel	5065	32	NA	NA	0	6945	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74.4865497506093	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTACATAGGGAAGGA	-2133628	True	NA	NA	False	NA	NA	NA	2151566	2094042	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2094065_2100994_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
WTC11_00049691	chr19	-	1158	7	NNC	ENSG00000104886.12	novel	2250	7	NA	NA	0	86857	intron_retention	FALSE	non_canonical	0	0	junction_1	626.443045207534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCATGGTGGCACGTGC	-2216397	True	NA	NA	False	NA	NA	NA	2236239	2143226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2143259_2233154_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00049692	chr19	-	1190	7	NNC	ENSG00000104886.12	novel	2250	7	NA	NA	0	86857	intron_retention	FALSE	non_canonical	0	0	junction_1	626.443045207534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCATGGTGGCACGTGC	-2216430	True	NA	NA	False	NA	NA	NA	2236272	2143226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2143258_2233154_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00049693	chr19	-	937	6	FSM	ENSG00000104886.12	ENST00000587394.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	668.550970382962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATATTTCTCAATAA	-2216430	True	NA	NA	False	NA	NA	NA	2236272	2230083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2230613_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
WTC11_00049694	chr19	-	491	4	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	16810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2037.86969379519	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACATGGCCAAGGCTGG	-2301127	False	NA	NA	False	AAAAAG	-1	NA	2328477	2304709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2304736_2321520_2321823_2324124_2324197_2328386
WTC11_00049695	chr19	-	517	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	16810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1764.86288419242	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACATGGCCAAGGCTGG	-2301236	True	NA	NA	False	AAAAAG	-1	NA	2328586	2304709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2304736_2321520_2321823_2324124_2324197_2328386_2328478_2328560
WTC11_00049696	chr19	-	513	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	16810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1820.3978102327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACATGGCCAAGGCTGG	-2301236	True	NA	NA	False	AAAAAG	-1	NA	2328586	2304709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2304736_2321520_2321823_2324124_2324193_2328386_2328478_2328560
WTC11_00049697	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2154.15448739304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301127	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
WTC11_00049698	chr19	-	751	4	NNC	ENSG00000099800.8	novel	1664	3	NA	NA	0	51377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2167.30190687766	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTGAGAGAAATCAGCA	-2364412	True	NA	NA	False	AAAAAG	-1	NA	2427586	2374247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374275_2426564_2427047_2427255_2427325_2427413
WTC11_00049699	chr19	-	2016	1	FSM	ENSG00000267749.1	ENST00000587894.1	2016	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAACCAGCCAGGTG	NA	False	NA	NA	False	ACTAAA	-5	NA	2643853	2641837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2641800_2643900
WTC11_00049700	chr19	-	722	2	ISM	ENSG00000176490.5	ENST00000588128.1	546	3	-7	1107	-7	-1107	5prime_fragment	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTCCCAGGGCCGTTGC	-2720078	True	NA	NA	False	AATAAA	-30	NA	2721348	2718505	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_2719183_2721303
WTC11_00049705	chr19	-	937	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	-16	-101	-16	0	multi-exon	FALSE	canonical	3	19	junction_2	7	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3478850	True	NA	-17	True	ATTAAA	-21	NA	3479104	3474406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3474997_3478418_3478479_3478817
WTC11_00049706	chr19	-	2168	4	NIC	ENSG00000129932.10	novel	1757	5	NA	NA	0	-8	intron_retention	FALSE	canonical	3	254	junction_1	17.9876500843094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCAAGCACTGACTCCT	-3498325	True	NA	-17	True	ATTAAA	-6	NA	3500637	3490831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3492500_3494027_3494105_3496540_3496887_3500560
WTC11_00049707	chr19	-	2320	12	NNC	ENSG00000161091.14	novel	777	7	NA	NA	0	12833	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	80.6011504542302	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGAGGGGAGCCACAC	-3554196	True	NA	NA	False	AAAAAG	-5	NA	3557586	3525427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3525461_3538274_3538757_3542775_3542978_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
WTC11_00049708	chr19	-	2095	3	FSM	ENSG00000006638.13	ENST00000375190.10	2642	3	101	446	101	-173	multi-exon	FALSE	canonical	1	2	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCACTGCGCCCGGCC	-3606696	False	NA	NA	False	NA	NA	NA	3606774	3594952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3595934_3599848_3600718_3606529
WTC11_00049709	chr19	-	5225	19	FSM	ENSG00000186111.11	ENST00000679828.1	5223	19	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_14	57.9244932095245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTTTGCCTTTCTGTG	-3696459	True	NA	34	True	AATAAA	-17	NA	3700468	3630180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661372_3661527_3661870_3662002_3664821_3664915_3667321_3667354_3700296
WTC11_00049711	chr19	-	1201	4	NNC	ENSG00000105278.12	novel	715	4	NA	NA	0	8273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.5297717945568	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCTACTTATGAGAAAATA	-3866819	True	NA	NA	False	AAAAAG	-1	NA	3869032	3795750	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3795780_3851805_3852615_3855401_3855697_3868964
WTC11_00049712	chr19	-	3394	16	NNC	ENSG00000167658.16	novel	3158	15	NA	NA	0	37427	intron_retention	FALSE	non_canonical	0	0	junction_1	2127.14279936465	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCATGTCCAGAGACT	-3874955	True	NA	NA	False	NA	NA	NA	3985463	3938628	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3938865_3976055_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
WTC11_00049713	chr19	-	1531	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_2	20.2192068719476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180889	True	NA	-4	True	AATAAA	-19	NA	4182534	4174108	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
WTC11_00049716	chr19	-	528	5	NIC	ENSG00000178078.12	novel	1508	13	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.5597135636299	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4327206	True	NA	-6	True	ATTAAA	-16	NA	4327426	4324042	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4324198_4325215_4325309_4326941_4327008_4327123_4327227_4327315
WTC11_00049717	chr19	-	1511	13	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	31.8811813178593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338113	True	NA	-6	True	ATTAAA	-16	NA	4338827	4324042	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4324198_4324454_4324665_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
WTC11_00049719	chr19	-	491	3	FSM	ENSG00000214456.8	ENST00000589728.1	508	3	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGCCAGCGGCCGCGCT	-4525454	False	NA	NA	False	NA	NA	NA	4525832	4523908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4524086_4524962_4525077_4525632
WTC11_00049720	chr19	-	1017	7	NNC	ENSG00000074842.8	novel	990	6	NA	NA	0	12846	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	326.688944818564	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGC	-4656128	True	NA	NA	False	AATACA	-26	NA	4670342	4628527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_4628554_4657543_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
WTC11_00049722	chr19	-	527	5	NNC	ENSG00000174917.9	novel	516	4	NA	NA	0	7436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	262.537021198916	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGGGACATGCCCCA	-5674206	True	NA	NA	False	AAAAAG	-2	NA	5680488	5670984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5671023_5678420_5678649_5679344_5679397_5679585_5679764_5680457
WTC11_00049723	chr19	-	526	5	NNC	ENSG00000174917.9	novel	516	4	NA	NA	0	7436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	262.537021198916	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGGGACATGCCCCA	-5674206	True	NA	NA	False	AAAAAG	-2	NA	5680488	5670984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5671023_5678421_5678649_5679344_5679397_5679585_5679764_5680457
WTC11_00049724	chr19	-	2816	16	FSM	ENSG00000196365.12	ENST00000587552.5	2816	16	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_13	257.187316086069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCTTCCTCACCTGCT	-5719794	False	NA	-5	True	ATTAAA	-14	NA	5719804	5691833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5713133_5713254_5714182_5714272_5719703
WTC11_00049725	chr19	-	833	2	FSM	ENSG00000141994.16	ENST00000590343.1	833	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAACACCCAGAACCCC	-5782094	False	NA	NA	False	NA	NA	NA	5785755	5784831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5785512_5785602
WTC11_00049730	chr19	-	732	4	FSM	ENSG00000125648.15	ENST00000595810.5	734	4	0	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	136.860837674219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6453990	False	NA	-4	True	AATACA	-17	NA	6454009	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6436465_6444150_6444302_6452311_6452480_6453980
WTC11_00049731	chr19	-	1792	11	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	150.48803939184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	-6456861	True	NA	-4	True	AATACA	-17	NA	6459726	6436080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6436465_6438446_6438535_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00049732	chr19	-	3556	11	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	19	junction_7	155.194748622497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-6456860	True	NA	-3	True	AATAAA	-16	NA	6459725	6440063	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6455951_6456093_6456419_6456532_6457502_6457591_6458197_6458325_6459472
WTC11_00049733	chr19	-	3566	11	NNC	ENSG00000125648.15	novel	3482	10	NA	NA	-443	0	intron_retention	FALSE	canonical	1	1	junction_10	125.102198222094	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-6460216	False	NA	-3	True	AATAAA	-16	NA	6460235	6440063	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472_6459840_6460198
WTC11_00049734	chr19	-	1321	2	ISM	ENSG00000205744.10	ENST00000590818.5	2422	12	6774	798	210	-56	intron_retention	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTCCAGGTCCCAGC	-6469181	False	NA	NA	False	NA	NA	NA	6469441	6468005	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6468119_6468233
WTC11_00049735	chr19	-	533	5	FSM	ENSG00000104833.12	ENST00000597686.5	636	5	103	0	62	0	multi-exon	FALSE	canonical	1	1	junction_4	62.5354899237225	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGAGCTGCGACTGCC	NA	False	NA	NA	False	NA	NA	NA	6502741	6496130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155_6502315_6502678
WTC11_00049736	chr19	-	867	8	FSM	ENSG00000125730.17	ENST00000599899.5	1992	8	1131	-6	1131	0	multi-exon	FALSE	canonical	2	10	junction_3	3.9070840946221	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	NA	False	NA	-1	True	GATAAA	-18	NA	6682229	6677834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6678024_6678151_6678288_6678371_6678456_6679124_6679209_6679406_6679497_6680157_6680264_6681940_6682031_6682141
WTC11_00049738	chr19	-	1991	18	NIC	ENSG00000125734.16	novel	2009	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	68.4114359407405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6737163	False	1825	-4	True	NA	NA	NA	6737268	6730054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
WTC11_00049739	chr19	-	2291	10	FSM	ENSG00000171105.14	ENST00000598216.1	2961	10	0	670	0	-670	multi-exon	FALSE	canonical	2	4	junction_1	10.1043933727908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACCCAGAGACGGCAGA	-7292382	False	NA	NA	False	NA	NA	NA	7293866	7152640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7152928_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
WTC11_00049741	chr19	-	1001	4	NIC	ENSG00000104883.8	novel	1078	5	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	26.8369562771605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-7488707	True	NA	-5	True	ATTAAA	-16	NA	7489021	7476874	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_7477437_7482032_7482212_7485837_7486027_7488950
WTC11_00049743	chr19	-	5959	7	NNC	ENSG00000066044.15	novel	6054	6	NA	NA	0	-1	intron_retention	TRUE	canonical	0	0	junction_1	719.108398566509	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGGTGTAGGGGTGA	-7997476	True	NA	0	True	AATAAA	-19	NA	8005659	7958573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_7961333_7961444_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
WTC11_00049744	chr19	-	8910	59	ISM	ENSG00000142449.13	ENST00000270509.6	9232	63	2386	-1	2117	0	3prime_fragment	FALSE	canonical	3	23	junction_42	22.9175809639975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGCCCTTTGGCAA	-8145370	False	NA	-7	True	AATAAA	-16	NA	8145380	8065401	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876
WTC11_00049745	chr19	-	479	2	FSM	ENSG00000142449.13	ENST00000595036.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCCACGAGTGTGAT	-8081026	False	NA	NA	False	NA	NA	NA	8081056	8074765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8075191_8081002
WTC11_00049746	chr19	-	2672	11	FSM	ENSG00000186994.12	ENST00000593649.5	2672	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	18.3455716727498	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTATTAAAACAGGCTT	-8342911	True	NA	NA	False	AATAAA	-18	NA	8343262	8323314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8323539_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
WTC11_00049748	chr19	-	240	1	FSM	ENSG00000279827.1	ENST00000623944.1	1028	1	485	303	485	-303	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGCCACGCCCCCGC	NA	False	NA	NA	False	NA	NA	NA	8445112	8444872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8444900_8445100
WTC11_00049749	chr19	-	918	6	FSM	ENSG00000133246.12	ENST00000594696.1	1407	6	489	0	489	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCACATAAAGCCCCAG	NA	False	NA	NA	False	NA	NA	NA	8491534	8490084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8490227_8490337_8490373_8490475_8490510_8490593_8490757_8490886_8490996_8491099
WTC11_00049753	chr19	-	1015	4	FSM	ENSG00000142303.14	ENST00000603221.5	1015	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.86744175568088	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCATCCCTTTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	8593516	8589940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8589992_8591799_8591864_8591957_8592104_8592762
WTC11_00049754	chr19	-	1079	8	FSM	ENSG00000142303.14	ENST00000601163.1	1079	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.46230122694433	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCCCCAAACCCCT	NA	False	NA	NA	False	NA	NA	NA	8597322	8591799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596413_8596541_8596586_8596986_8597133_8597233
WTC11_00049756	chr19	-	3303	11	NNC	ENSG00000174652.20	novel	3544	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	15.6025638918737	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433663	True	NA	-6	True	AATAAA	-16	NA	9435526	9412597	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433692_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
WTC11_00049757	chr19	-	3624	12	NIC	ENSG00000174652.20	novel	3653	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_5	19.5359384868499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433663	True	NA	-6	True	AATAAA	-16	NA	9435526	9412597	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
WTC11_00049758	chr19	-	1598	1	Genic_Genomic	ENSG00000130818.12	novel	NA	NA	NA	NA	11764	15	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTGGTCAACTCT	NA	False	NA	12	True	AATAAA	-34	NA	9524805	9523207	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_9523200_9524800
WTC11_00049759	chr19	-	4626	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_4	40.8928138212843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	-9618614	True	NA	-7	True	AATAAA	-17	NA	9621188	9607325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9621161
WTC11_00049760	chr19	-	947	6	FSM	ENSG00000171469.11	ENST00000443819.5	956	6	9	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	45.5104383630833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTCACACCTAAAGCA	-9618648	True	NA	NA	False	NA	NA	NA	9621222	9610955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9611337_9614020_9614104_9617044_9617227_9618090_9618180_9619431_9619583_9621161
WTC11_00049762	chr19	-	5344	1	ISM	ENSG00000171466.10	ENST00000453372.7	12639	6	24154	3796	24102	-3795	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTATGTGAGCCAGTC	NA	False	NA	NA	False	NA	NA	NA	9650946	9645602	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9645600_9650900
WTC11_00049764	chr19	-	1571	5	ISM	ENSG00000080573.7	ENST00000264828.4	6207	67	43817	0	2200	0	3prime_fragment	FALSE	canonical	3	11	junction_3	3.24037034920393	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	-9966234	True	NA	-1	True	AATAAA	-14	NA	9966687	9959560	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535
WTC11_00049765	chr19	-	1034	4	FSM	ENSG00000130811.12	ENST00000590158.1	1034	4	0	0	0	0	multi-exon	FALSE	canonical	3	2078	junction_2	25.0377492776186	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGAGCGCGGGCTCCAA	-10085754	False	NA	-53	True	NA	NA	NA	10116688	10115061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966
WTC11_00049766	chr19	-	5296	42	NNC	ENSG00000130816.17	novel	5274	41	NA	NA	0	9153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	157.648050393845	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCCAGGTGCGGTGGC	-10184100	True	NA	NA	False	NA	NA	NA	10194953	10124188	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10124214_10133348_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
WTC11_00049773	chr19	-	3478	14	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	47042	intron_retention	FALSE	non_canonical	0	0	junction_1	189.061181043372	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGGAGAACAGTGTGGC	-10328881	True	NA	NA	False	AAAAAG	-5	NA	10333491	10269169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10269202_10316211_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
WTC11_00049774	chr19	-	2745	1	FSM	ENSG00000267607.1	ENST00000589379.1	3219	1	466	8	466	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAACAAATGAATAAA	NA	False	NA	NA	False	AATAAA	-8	NA	10288553	10285808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10285800_10288600
WTC11_00049775	chr19	-	1647	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	4	77461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.63478601478	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-10379774	True	NA	NA	False	NA	NA	NA	10403538	10313671	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10391132_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
WTC11_00049776	chr19	-	4693	10	FSM	ENSG00000161847.14	ENST00000592208.5	4693	10	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_9	216.826493757248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGAGTTGGCTGGTTC	-10328901	True	NA	NA	False	ATTAAA	-25	NA	10333511	10316214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10333288
WTC11_00049778	chr19	-	1685	13	NNC	ENSG00000129354.12	novel	1748	12	NA	NA	0	64361	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	318.642291170243	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGCAGTGGCTCGCG	-10582030	False	NA	NA	False	AAAAAG	-1	NA	10587219	10508309	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10508340_10572670_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579859_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
WTC11_00049782	chr19	-	1140	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	80	-134	0	-7	multi-exon	FALSE	canonical	2	3	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGCACGGGTGGCTT	-10568962	False	NA	-9	True	ATTAAA	-16	NA	10568979	10566466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10567418_10568512_10568669_10568946
WTC11_00049784	chr19	-	4030	28	NNC	ENSG00000130158.14	novel	4009	30	NA	NA	-732	4	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_27	30.2648573632993	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTGGTGCGGTCACT	NA	False	NA	-1	True	TTTAAA	-22	NA	11230064	11199290	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297_11229391_11229759
WTC11_00049785	chr19	-	2126	6	NIC	ENSG00000187266.14	novel	2411	8	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.2404268257969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATGTTCTAAGAAAGTA	-11383892	True	NA	NA	False	AATAAA	-16	NA	11384272	11377207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11378596_11378690_11378779_11381691_11381850_11381929_11382106_11383096_11383233_11384092
WTC11_00049790	chr19	-	658	3	NNC	ENSG00000198003.12	novel	1943	11	NA	NA	13033	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	63	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11420786	True	NA	-8	True	AATAAA	-15	NA	11421866	11420604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11420948_11421127_11421213_11421636
WTC11_00049791	chr19	-	2057	9	NIC	ENSG00000161914.10	novel	2154	9	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.87411967464942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCCCTAGGCCTGA	-11505474	True	NA	-19	True	ATTAAA	-16	NA	11505778	11483426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11483860_11484079_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
WTC11_00049792	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	116.741766304952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	-11525887	True	NA	NA	False	NA	NA	NA	11529124	11506300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
WTC11_00049793	chr19	-	1188	5	NIC	ENSG00000130165.10	novel	1172	5	NA	NA	-92	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	337.25880270202	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTGTCCGTGATGT	NA	False	NA	-16	True	AATAAA	-15	NA	11559328	11553045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11553811_11554010_11554082_11554231_11554366_11555173_11555254_11559190
WTC11_00049795	chr19	-	609	1	FSM	ENSG00000212497.1	ENST00000391195.1	109	1	99	-599	99	599	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTGGCTTTATCATGG	-12027673	False	NA	NA	False	AATAAA	-3	NA	12027922	12027313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12027300_12027900
WTC11_00049796	chr19	-	564	5	FSM	ENSG00000188868.14	ENST00000601858.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.49749974995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCACACTGGAAAGAAACG	-12332834	False	NA	NA	False	NA	NA	NA	12333502	12319541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12324918_12324980_12333479
WTC11_00049797	chr19	-	306	3	FSM	ENSG00000198342.10	ENST00000462995.1	536	3	11	219	-9	-219	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTGCACTCACAAGAG	-12365268	True	NA	NA	False	NA	NA	NA	12365650	12352009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12352071_12352987_12353115_12365532
WTC11_00049798	chr19	-	3551	3	FSM	ENSG00000196466.10	ENST00000460935.1	4076	3	525	0	525	0	multi-exon	FALSE	canonical	3	13	junction_2	10	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-12393880	False	NA	-1	True	ATTAAA	-22	NA	12394595	12390015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12392207_12392602_12392664_12393296
WTC11_00049799	chr19	-	784	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4436	28942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGCAGTGGCTCACACCT	-12643867	False	NA	NA	False	AAAAAG	-4	NA	12643961	12614888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614927_12643215
WTC11_00049802	chr19	-	918	4	NNC	ENSG00000123144.11	novel	879	3	NA	NA	0	5537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	957.873106882581	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAATAGGAA	-12712730	True	NA	NA	False	AAAAAG	-2	NA	12734684	12725102	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12725143_12730640_12731069_12731343_12731422_12734312
WTC11_00049803	chr19	-	987	3	FSM	ENSG00000123144.11	ENST00000591254.1	988	3	0	1	0	1	multi-exon	FALSE	canonical	2	13	junction_2	1159.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGCTTGGTTTGTC	-12712703	True	NA	-2	True	AGTAAA	-20	NA	12734657	12730640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12731069_12731343_12731558_12734312
WTC11_00049806	chr19	-	1536	3	FSM	ENSG00000105610.6	ENST00000264834.6	1613	3	75	2	75	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCAGCGTTGGCCTGA	NA	False	NA	NA	False	TATAAA	-18	NA	12887126	12884423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12885061_12885316_12886143_12887053
WTC11_00049808	chr19	-	1353	7	ISM	ENSG00000104915.15	ENST00000587230.6	1304	8	189	3	-8	1	intron_retention	FALSE	canonical	2	253	junction_6	62.9199226530569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTGTCGTGTGGTGT	-13149992	False	NA	-2	True	AATAAA	-20	NA	13150186	13144060	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
WTC11_00049810	chr19	-	2548	3	FSM	ENSG00000141837.22	ENST00000635988.1	2548	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGGGAGGTGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	13226555	13213782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13214334_13214500_13214609_13224666
WTC11_00049811	chr19	-	594	1	FSM	ENSG00000141837.22	ENST00000636670.1	740	1	1	145	1	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAAACCCATGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	13227681	13227087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13227100_13227700
WTC11_00049815	chr19	-	1018	2	FSM	ENSG00000132000.14	ENST00000587954.1	1073	2	0	55	0	-55	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCACATGTATCCCCCC	-13932897	False	NA	NA	False	AAAACA	-20	NA	13932944	13931241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13932113_13932797
WTC11_00049816	chr19	-	4348	21	FSM	ENSG00000132005.9	ENST00000254325.9	4375	21	27	0	-4	0	multi-exon	TRUE	canonical	1	2	junction_4	4.53982378512647	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-14004291	True	NA	-4	True	AATAAA	-22	NA	14006293	13961529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
WTC11_00049818	chr19	-	1965	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	-388	-990	-364	4	multi-exon	FALSE	canonical	1	2	junction_2	114.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGCTTTTGTCTCTG	-14136930	True	NA	0	True	ATTAAA	-43	NA	14136977	14119507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14120666_14121531_14121709_14136347
WTC11_00049821	chr19	-	563	4	NNC	ENSG00000099795.7	novel	535	3	NA	NA	0	31654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1404.81560672171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCATGGTGGCTCAC	-14538187	True	NA	NA	False	NA	NA	NA	14572066	14534423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14534456_14566081_14566266_14566764_14566934_14571888
WTC11_00049822	chr19	-	570	4	NNC	ENSG00000099795.7	novel	535	3	NA	NA	0	22658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1404.81560672171	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-14538187	True	NA	NA	False	NA	NA	NA	14572066	14543419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14543455_14566077_14566266_14566764_14566934_14571888
WTC11_00049823	chr19	-	609	1	FSM	ENSG00000269378.1	ENST00000596032.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTGCCCGTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	14622242	14621633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14621600_14622200
WTC11_00049824	chr19	-	683	1	ISM	ENSG00000127530.4	ENST00000641666.1	11711	5	42322	3021	7248	-3021	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCCCAAGCAGAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	14792963	14792280	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14792300_14793000
WTC11_00049826	chr19	-	6010	15	Fusion	ENSG00000105131.8_ENSG00000141867.19	novel	4624	12	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	349.011022573143	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15320543	False	NA	-3	True	AATACA	-25	NA	15332443	15226918	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_15227663_15227770_15227908_15227996_15228537_15247047_15249291_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
WTC11_00049828	chr19	-	4120	14	FSM	ENSG00000105127.10	ENST00000681018.1	4196	14	0	76	0	45	multi-exon	FALSE	canonical	1	9	junction_13	59.8156932565636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCGTCTTAATCGCAGG	-15374586	False	NA	46	True	NA	NA	NA	15379109	15353475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15378488
WTC11_00049830	chr19	-	2472	15	NIC	ENSG00000011243.19	novel	2113	16	NA	NA	-1	0	intron_retention	FALSE	canonical	2	14	junction_6	266.539894398798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408825	True	NA	-10	True	AATAAA	-15	NA	15419021	15380049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15399831_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
WTC11_00049835	chr19	-	709	1	FSM	ENSG00000279203.1	ENST00000624655.1	631	1	180	-258	180	258	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGACCCTCTACCTCAT	NA	False	NA	NA	False	AATAAA	-33	NA	15383652	15382943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15382900_15383700
WTC11_00049836	chr19	-	8909	13	FSM	ENSG00000011451.21	ENST00000673675.1	8987	13	18	60	3	-60	multi-exon	FALSE	canonical	1	2	junction_8	45.7408157144385	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAGAAATCAACAATATC	-15449769	True	NA	NA	False	NA	NA	NA	15449938	15420037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15428109_15428509_15429585_15430090_15431011_15431183_15436805_15437130_15438577_15440716_15442675_15442749_15448102_15448368_15449797
WTC11_00049837	chr19	-	683	4	FSM	ENSG00000105122.13	ENST00000609274.5	1717	4	0	1034	0	-1000	multi-exon	FALSE	canonical	1	1	junction_1	2.05480466765633	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCAGCCCTCTCCAT	-15454361	False	NA	NA	False	NA	NA	NA	15454375	15452657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15452816_15453106_15453498_15454148_15454268_15454360
WTC11_00049838	chr19	-	217	2	FSM	ENSG00000105122.13	ENST00000597025.1	299	2	0	82	0	-82	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACCTGGGTGAAGTTCT	-15457282	False	NA	NA	False	NA	NA	NA	15457319	15456457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15456647_15457291
WTC11_00049839	chr19	-	375	3	FSM	ENSG00000267453.8	ENST00000588182.3	491	3	66	50	33	-50	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGCTCTGAATCCCC	-15862965	False	NA	NA	False	NA	NA	NA	15862975	15852042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15852250_15854732_15854837_15862911
WTC11_00049840	chr19	-	2743	21	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	55.2223686561886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468940	True	NA	NA	False	TATAAA	-42	NA	16471960	16355246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00049841	chr19	-	3546	22	NIC	ENSG00000127527.14	novel	3486	16	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	49.534476873113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTGTTTTTTTAAAAAA	-16468930	True	NA	NA	False	AATAAA	-26	NA	16471950	16382981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16384276_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00049842	chr19	-	390	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	30	0	-30	multi-exon	FALSE	canonical	3	209	junction_2	17.326921891156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCATGGCTAGTGTAT	-16468923	True	NA	NA	False	AATAAA	-23	NA	16471943	16440682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
WTC11_00049845	chr19	-	1035	5	NIC	ENSG00000127526.15	novel	1905	4	NA	NA	5	328	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	51.346859689761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCGTTTCACATTGATGA	-16571421	True	NA	NA	False	AGTAAA	-20	NA	16572410	16564899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16565133_16566531_16566658_16568031_16568170_16571511_16571583_16571943
WTC11_00049846	chr19	-	1846	3	FSM	ENSG00000160111.15	ENST00000596224.5	2117	3	276	-5	228	1	multi-exon	FALSE	canonical	2	9	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTGGGGTGCACATG	-16896601	False	NA	-2	True	AATACA	-19	NA	16896665	16892952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16894438_16896175_16896327_16896455
WTC11_00049847	chr19	-	424	2	ISM	ENSG00000160111.15	ENST00000602159.1	510	3	179	5559	179	-1	5prime_fragment	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAACTTGACTCCACCT	NA	False	NA	-7	True	ATTAAA	-20	NA	16970946	16957547	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_16957916_16970890
WTC11_00049848	chr19	-	1492	10	NNC	ENSG00000131351.15	novel	3176	10	NA	NA	1815	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	90.2662727711741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	-17073345	False	NA	-36	True	AGTAAA	-13	NA	17073385	17049765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060224_17062697_17062780_17069030_17069087_17073273
WTC11_00049849	chr19	-	3747	13	NIC	ENSG00000130307.12	novel	2402	14	NA	NA	-28	-4	intron_retention	FALSE	canonical	1	5	junction_12	16.6406046230966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGGGAGACTGAAGC	-17263877	True	NA	-16	True	AATAAA	-24	NA	17264781	17249174	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258702_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264560
WTC11_00049852	chr19	-	481	1	FSM	ENSG00000269720.2	ENST00000597169.1	856	1	427	-52	427	52	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCCTGACCCGGCTC	NA	False	NA	NA	False	NA	NA	NA	17391857	17391376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17391400_17391900
WTC11_00049854	chr19	-	4324	34	NIC	ENSG00000130477.16	novel	5314	42	NA	NA	2	1463	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	14.825771124628	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCAGGGGGCCCGAGG	-17684796	True	NA	NA	False	NA	NA	NA	17688352	17624824	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649338_17649345_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17688177
WTC11_00049855	chr19	-	2414	3	NNC	ENSG00000105639.20	novel	5386	24	NA	NA	11731	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_2	5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	-17830775	False	NA	-1	True	AATAAA	-17	NA	17830794	17824781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17826911_17830107_17830219_17830620
WTC11_00049856	chr19	-	3421	10	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	9233	-1370	7311	0	3prime_fragment	FALSE	canonical	1	1	junction_9	6.15439218850055	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	-17835098	False	NA	-1	True	AATAAA	-17	NA	17835214	17824781	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_17826911_17830107_17830219_17830502_17830621_17831227_17831401_17831673_17831799_17832518_17832709_17832789_17832930_17834570_17834722_17834851_17835004_17835082
WTC11_00049858	chr19	-	805	4	FSM	ENSG00000105655.19	ENST00000581672.5	793	4	0	-12	0	0	multi-exon	TRUE	canonical	3	45	junction_1	417.79660123079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18435891	False	NA	-35	True	AATAAA	-27	NA	18435902	18434808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435247_18435484_18435562_18435677_18435756
WTC11_00049859	chr19	-	1140	11	NNC	ENSG00000105669.14	novel	1131	10	NA	NA	0	14002	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1014.78047379717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAAGGGGCGCTGGGCTG	-18897785	True	NA	NA	False	NA	NA	NA	18919387	18885511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18885538_18899513_18899710_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00049860	chr19	-	1254	11	NNC	ENSG00000105669.14	novel	1131	10	NA	NA	-97	14002	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	802.419441439451	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAAGGGGCGCTGGGCTG	-18919459	True	NA	NA	False	NA	NA	NA	18919484	18885511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18885538_18899513_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00049861	chr19	-	937	9	NNC	ENSG00000105669.14	novel	948	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	1061.21731398428	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	-18897753	True	NA	-5	True	AATAAA	-26	NA	18919355	18899516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18899724_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00049862	chr19	-	1098	10	NNC	ENSG00000105669.14	novel	1131	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	828.023751672217	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATGATGTGCTCTGGT	-18897761	True	NA	-8	True	AATAAA	-23	NA	18919363	18899519	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18899724_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
WTC11_00049863	chr19	-	1418	10	NIC	ENSG00000051128.19	novel	1560	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	102.128942947895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTGTGTGGTATGT	-18938826	True	NA	-4	True	NA	NA	NA	18941217	18929202	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941192
WTC11_00049866	chr19	-	4165	12	FSM	ENSG00000064607.17	ENST00000594773.5	4169	12	0	4	0	-1	multi-exon	FALSE	canonical	2	14	junction_11	205.759950001922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGGGGTCTCCATG	-19033619	True	NA	-12	True	AATAAA	-15	NA	19033816	18990893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18993647_18993741_18994365_18995281_19001612_19001675_19004167_19004274_19004429_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033761
WTC11_00049868	chr19	-	1612	11	NIC	ENSG00000064489.23	novel	1804	13	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	26.4393645914572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-19188908	True	NA	-3	True	AATAAA	-26	NA	19192139	19145566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19192080
WTC11_00049870	chr19	-	627	5	NNC	ENSG00000184162.15	novel	1290	5	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.8691885482127	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTTTGAGGATGCCACT	-19201882	True	NA	NA	False	NA	NA	NA	19203346	19202001	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19202040_19202330_19202399_19202469_19202576_19202790_19202882_19203022
WTC11_00049871	chr19	-	1827	10	NNC	ENSG00000213996.13	novel	1518	10	NA	NA	0	254	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	7.60279350869156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTATTAAGCACCTAC	-19272930	True	NA	-1	True	AATAAA	-19	NA	19273301	19264109	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268808_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
WTC11_00049872	chr19	-	737	2	FSM	ENSG00000213996.13	ENST00000590431.6	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCTAAGTGTTTCAG	-19266345	False	NA	-2	True	AGTAAA	-23	NA	19266716	19264363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19264874_19266489
WTC11_00049873	chr19	-	1880	10	FSM	ENSG00000105705.16	ENST00000589144.5	2066	10	0	186	0	-171	multi-exon	FALSE	canonical	1	1	junction_8	116.685183715695	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACACCTGTCGTCTCA	NA	False	NA	NA	False	TATAAA	-17	NA	19303828	19276203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302444_19303347_19303449_19303723
WTC11_00049874	chr19	-	2139	14	NIC	ENSG00000105705.16	novel	2282	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	96.2796715196359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGCCTGGTCCTGTTGC	-19317651	True	NA	-3	True	AATAAA	-21	NA	19320497	19276512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303913_19305848_19306077_19310096_19310201_19316421_19316594_19320462
WTC11_00049876	chr19	-	826	6	FSM	ENSG00000105705.16	ENST00000585763.5	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	139.253150772254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCGTCCACGCCTGCGC	-19317663	True	NA	NA	False	NA	NA	NA	19320509	19297170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19297345_19303347_19303449_19305848_19306077_19310096_19310201_19316421_19316594_19320462
WTC11_00049877	chr19	-	1394	8	FSM	ENSG00000105717.14	ENST00000557978.6	1416	8	0	22	0	-16	multi-exon	TRUE	canonical	1	2	junction_4	5.04267502706365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTTATTTTAATTCC	-19618190	False	2297	-21	True	ATTAAA	-3	NA	19618693	19561728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570098_19570300_19570686_19570834_19599291_19599366_19618510
WTC11_00049878	chr19	-	1806	4	NNC	ENSG00000064547.14	novel	2546	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	74.9414586342047	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19627606	False	NA	-14	True	AGTAAA	-30	NA	19627800	19623654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19624570_19626542_19627285_19627396_19627505_19627759
WTC11_00049879	chr19	-	558	2	FSM	ENSG00000064547.14	ENST00000588233.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTGACCTCTTCGCGG	-19628567	False	NA	NA	False	NA	NA	NA	19628761	19627060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19627285_19628427
WTC11_00049881	chr19	-	556	4	FSM	ENSG00000266904.7	ENST00000588223.5	565	4	9	0	9	0	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGCCCTCTAGCTGCT	-19776223	True	NA	NA	False	NA	NA	NA	19776404	19758395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19758547_19761203_19761422_19762537_19762647_19776326
WTC11_00049883	chr19	-	1662	1	FSM	ENSG00000270270.1	ENST00000605360.1	577	1	-58	-1027	-58	1027	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19871357	19869695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19869700_19871400
WTC11_00049884	chr19	-	718	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	39.6568615332412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGCATTGAATTAGG	-20036982	True	NA	-1	True	AATAAA	-25	NA	20039505	20004415	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
WTC11_00049885	chr19	-	564	1	FSM	ENSG00000274612.1	ENST00000616168.1	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAATAGAATCTGACT	NA	False	NA	NA	False	AATACA	-29	NA	20087576	20087012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20087000_20087600
WTC11_00049886	chr19	-	1692	1	NIC	ENSG00000267383.8	novel	722	3	NA	NA	-4783	-5497	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGGGTGACAGAGT	NA	False	NA	NA	False	NA	NA	NA	20132733	20131041	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20131000_20132700
WTC11_00049887	chr19	-	3163	1	FSM	ENSG00000279039.1	ENST00000623510.1	2598	1	-365	-200	-365	200	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-20210143	False	NA	NA	False	NA	NA	NA	20210154	20206991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20207000_20210200
WTC11_00049888	chr19	-	1313	2	ISM	ENSG00000267383.8	ENST00000693630.1	520	3	5	31640	2	0	5prime_fragment	FALSE	canonical	3	13	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTACAGTGTTTTGCTGA	-20217546	True	NA	-7	True	ATTAAA	-11	NA	20238429	20216145	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_20217317_20238287
WTC11_00049889	chr19	-	3461	1	FSM	ENSG00000280079.1	ENST00000624228.1	1590	1	-1729	-142	-1729	142	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGTGTCAGCTTTT	-20223883	False	NA	-4	True	AATAAA	-14	NA	20223915	20220454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20220500_20223900
WTC11_00049891	chr19	-	887	3	FSM	ENSG00000231205.12	ENST00000689878.1	1426	3	52	487	11	0	multi-exon	FALSE	canonical	3	61	junction_2	160	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20417070	True	NA	-1	True	AATATA	-18	NA	20424910	20405449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409029_20424785
WTC11_00049893	chr19	-	3803	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	-3236	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324651	True	NA	1	True	AATAAA	-25	NA	21329336	21291159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21294740_21309245_21309342_21329209
WTC11_00049894	chr19	-	3973	4	FSM	ENSG00000182141.10	ENST00000602023.1	590	4	0	-3383	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8.2192186706253	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324697	True	NA	1	True	AATAAA	-25	NA	21329382	21291159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21294740_21306817_21306942_21309245_21309342_21329209
WTC11_00049895	chr19	-	4112	4	NNC	ENSG00000268119.7	novel	803	3	NA	NA	-287	3542	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	57.0438427878066	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTCTCTCTAGTCCTC	NA	False	NA	-13	True	AATAAA	-21	NA	21464195	21440698	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_21444141_21454382_21454473_21456460_21456589_21463743
WTC11_00049897	chr19	-	1099	2	FSM	ENSG00000284428.1	ENST00000638174.1	1989	2	890	0	890	0	multi-exon	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTACGCCCTAGTGTGTT	NA	False	NA	-6	True	CATAAA	-21	NA	23261744	23259960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23260935_23261619
WTC11_00049898	chr19	-	662	4	FSM	ENSG00000167232.14	ENST00000599743.5	662	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	20.4178571081514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTTATTTATATTCA	-23391174	True	NA	NA	False	AATGAA	-3	NA	23395457	23338748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23339055_23373741_23373838_23374637_23374765_23395324
WTC11_00049899	chr19	-	3572	3	FSM	ENSG00000167232.14	ENST00000397082.2	3572	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAAAAAATTAGCCG	-23391163	True	NA	NA	False	NA	NA	NA	23395446	23359402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23362726_23374637_23374765_23395324
WTC11_00049900	chr19	-	3395	9	NNC	ENSG00000269416.7	novel	2766	8	NA	NA	0	210	intron_retention	FALSE	canonical	3	28	junction_5	45.0220432121866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCGATTTAGTTGGAGA	-23411606	True	NA	-6	True	AATAAA	-18	NA	23416047	23398886	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23401048_23402176_23402513_23403205_23403494_23403719_23403748_23404476_23404563_23404740_23404847_23404950_23405109_23405257_23405336_23415893
WTC11_00049901	chr19	-	1002	5	NNC	ENSG00000269416.7	novel	1338	6	NA	NA	3	73	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	59.7594134844043	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAATTTGCAATTGCAA	-23411621	True	NA	69	True	AAAAAG	-42	NA	23416062	23399023	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23399368_23400864_23401048_23403205_23403494_23403719_23403748_23415903
WTC11_00049902	chr19	-	3591	4	FSM	ENSG00000261824.8	ENST00000656191.1	4842	4	0	1251	0	-46	multi-exon	TRUE	canonical	3	7	junction_1	18.9795211273157	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAGAAATTGTAATTTC	-27793818	True	NA	NA	False	NA	NA	NA	27793914	27713597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999
WTC11_00049903	chr19	-	3369	5	FSM	ENSG00000261824.8	ENST00000654098.1	3832	5	0	463	0	-46	multi-exon	FALSE	canonical	3	7	junction_1	18.0693109995927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAGAAATTGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	27793991	27713597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999_27793233_27793531
WTC11_00049904	chr19	-	1625	5	FSM	ENSG00000261824.8	ENST00000659734.1	1625	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	17.4714052096561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGATGTCTGGATT	-27793819	True	NA	NA	False	AATAAA	-27	NA	27793915	27727386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
WTC11_00049905	chr19	-	599	3	FSM	ENSG00000267243.6	ENST00000585697.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCATCTTGTATGAC	NA	False	NA	NA	False	NA	NA	NA	28466682	28460338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_28460446_28461286_28461498_28466401
WTC11_00049908	chr19	-	1435	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	0	1973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTCCTTTAGTATTT	-29180404	True	NA	NA	False	AATGAA	-32	NA	29213151	29203346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_29203645_29207268_29208159_29212904
WTC11_00049909	chr19	-	5721	3	NNC	ENSG00000121297.8	novel	5065	2	NA	NA	-1525	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	27	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTGCGTTCACAAT	-31350936	False	NA	0	True	ATTAAA	-19	NA	31350961	31274944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_31279753_31349179_31349851_31350719
WTC11_00049910	chr19	-	348	2	NNC	ENSG00000267213.4	novel	972	3	NA	NA	14373	-8	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATATCCTGCTGTACT	NA	False	NA	-7	True	AATAAA	-16	NA	32391187	32390057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_32390334_32391115
WTC11_00049911	chr19	-	1631	2	FSM	ENSG00000124299.15	ENST00000593085.1	1763	2	260	-128	260	128	multi-exon	FALSE	canonical	3	787	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAACGGCTGCTTCTGCC	-33388809	False	NA	NA	False	NA	NA	NA	33388860	33386821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889
WTC11_00049912	chr19	-	387	1	FSM	ENSG00000257074.3	ENST00000587474.1	316	1	11	-82	11	82	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTATTTGTACAAACAA	NA	False	NA	NA	False	NA	NA	NA	34296581	34296194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34296200_34296600
WTC11_00049913	chr19	-	2598	4	Fusion	ENSG00000205209.8_ENSG00000268751.2	novel	712	3	NA	NA	-421	0	multi-exon	FALSE	canonical	1	3	junction_3	23.2999761564017	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTGTGTTCTTCA	-34677476	True	NA	-2	True	AATAAA	-19	NA	34677580	34576728	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_34576995_34577265_34577457_34577542_34577733_34675629
WTC11_00049914	chr19	-	1236	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	-708	12	-708	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCTCTACCTCTGAG	-34734352	True	NA	-11	True	ATTAAA	-11	NA	34734545	34733309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34733300_34734500
WTC11_00049915	chr19	-	3229	5	FSM	ENSG00000153896.19	ENST00000673678.1	3226	5	0	-3	0	-3	multi-exon	FALSE	non_canonical	0	0	junction_4	20.0686322403895	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTGTGTAATGTACT	-34772915	True	NA	NA	False	AATAAA	-16	NA	34773207	34758075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34760560_34767315_34767412_34769428_34769556_34772335_34772474_34772823
WTC11_00049916	chr19	-	2567	2	FSM	ENSG00000180884.10	ENST00000605484.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTGATCACTGTGTG	-34960304	False	NA	-2	True	GATAAA	-17	NA	34960703	34957473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34959572_34960234
WTC11_00049917	chr19	-	2891	8	FSM	ENSG00000153902.14	ENST00000392225.7	2891	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	6.15778916064352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35135178	False	NA	-6	True	AATAAA	-17	NA	35135200	35124512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35125508_35126269_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
WTC11_00049918	chr19	-	557	7	FSM	ENSG00000153902.14	ENST00000592346.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	7.28964257620968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTGCCGCGTCCTCT	-35134606	False	NA	NA	False	NA	NA	NA	35134628	35131531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35131556_35131788_35131861_35131970_35132043_35133317_35133445_35133692_35133765_35134032_35134105_35134510
WTC11_00049919	chr19	-	361	1	FSM	ENSG00000279619.1	ENST00000624372.1	1936	1	238	1337	238	-1337	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTGGCCACTCCTG	-35139320	False	NA	NA	False	NA	NA	NA	35139342	35138981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35139000_35139300
WTC11_00049920	chr19	-	1024	11	ISM	ENSG00000161249.21	ENST00000414866.6	867	12	26	-65	-2	0	intron_retention	FALSE	canonical	3	530	junction_1	318.016666229932	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481322	True	NA	-2	True	AATAAA	-21	NA	35510444	35497219	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183
WTC11_00049923	chr19	-	499	5	NIC	ENSG00000161249.21	novel	1611	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	32	junction_4	699.844759571721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481260	True	NA	-3	True	AATAAA	-17	NA	35510382	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35510183
WTC11_00049924	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	605.703706107067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
WTC11_00049925	chr19	-	738	3	ISM	ENSG00000126246.10	ENST00000588018.5	1148	5	1770	271	-45	0	3prime_fragment	FALSE	canonical	3	21	junction_2	44.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	-35739744	False	NA	NA	False	NA	NA	NA	35740641	35739527	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35739627_35739709_35740087_35740379
WTC11_00049926	chr19	-	581	3	FSM	ENSG00000126246.10	ENST00000591277.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	35.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACCAGCAAGTTCCAT	-35740450	False	NA	NA	False	NA	NA	NA	35741347	35740016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35740089_35740379_35740565_35741023
WTC11_00049927	chr19	-	621	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	0	30	combination_of_known_junctions	TRUE	canonical	3	8	junction_1	62.6252079171532	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCACACATGTGACGAA	-35744501	True	NA	25	True	NA	NA	NA	35745398	35742496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742620_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
WTC11_00049928	chr19	-	772	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_5	50.3336092707668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744498	True	NA	-5	True	AATAAA	-26	NA	35745395	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
WTC11_00049929	chr19	-	799	7	NIC	ENSG00000161265.15	novel	1244	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_5	48.3749820556958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744500	True	NA	-5	True	AATAAA	-26	NA	35745397	35742526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745213_35745347
WTC11_00049930	chr19	-	792	7	NIC	ENSG00000161265.15	novel	904	8	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	55.2853707794587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCAACTTGCTTTTGCT	-35744489	True	NA	-13	True	AATAAA	-18	NA	35745386	35742534	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744625_35744693_35745124_35745213_35745347
WTC11_00049931	chr19	-	504	4	FSM	ENSG00000161270.20	ENST00000592132.1	561	4	0	57	0	-57	multi-exon	FALSE	canonical	1	3	junction_2	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCTCCTTCAGAATCT	-35848907	False	NA	NA	False	NA	NA	NA	35848994	35847983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35848166_35848252_35848398_35848636_35848795_35848975
WTC11_00049932	chr19	-	2116	11	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	4	22	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	12.4257796536073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTTGTCTGATCTCT	-35899540	True	NA	NA	False	TTTAAA	-17	NA	35900528	35887630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35898471_35898533_35898718_35898823_35900441
WTC11_00049933	chr19	-	590	4	FSM	ENSG00000167604.15	ENST00000588497.2	829	4	0	239	0	55	multi-exon	FALSE	canonical	3	37	junction_3	4.98887651569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGGTGTGGGCAGG	-35896679	False	NA	NA	False	NA	NA	NA	35897667	35896217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35896539_35896725_35896832_35896912_35897059_35897650
WTC11_00049936	chr19	-	1370	9	NNC	ENSG00000181392.17	novel	1377	8	NA	NA	0	40997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.8380196084547	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAAAAAACCCACAATA	-36004634	False	4148	NA	False	NA	NA	NA	36008782	35962309	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35962337_36003309_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
WTC11_00049937	chr19	-	1058	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-53	-5	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	86.7405134102091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGGATGTGTGAAGATA	-36004549	False	NA	-40	True	AATAAA	-10	NA	36008697	36003314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008216_36008368_36008553
WTC11_00049938	chr19	-	1130	7	FSM	ENSG00000248101.2	ENST00000473572.2	1130	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	118.919790895657	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAACCACCCACCGGGAG	-36010087	True	NA	NA	False	NA	NA	NA	36014235	36008637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36008692_36009258_36009554_36010566_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
WTC11_00049939	chr19	-	1018	7	NIC	ENSG00000239382.11	novel	977	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	102.322610730311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	-36009440	False	NA	-10	True	AATAAA	-14	NA	36013588	36009120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36013513
WTC11_00049941	chr19	-	1013	7	NIC	ENSG00000232677.10	novel	1103	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_5	306.891629443069	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315093	True	NA	-31	True	NA	NA	NA	36331687	36313093	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322223_36330252_36330493_36331446
WTC11_00049942	chr19	-	872	4	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	14	-2374	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	13.2748718344933	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATCAAAACCAAAATT	NA	False	NA	NA	False	AATAAA	-5	NA	36367959	36336826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36337397_36360434_36360534_36362111_36362239_36367883
WTC11_00049943	chr19	-	5057	2	NIC	ENSG00000254004.7	novel	5285	3	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCAGTTGTTTTTA	-36525359	True	NA	-4	True	AATAAA	-19	NA	36528265	36510689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36515700_36528218
WTC11_00049944	chr19	-	568	4	FSM	ENSG00000186020.13	ENST00000587286.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTTTGGTTTAGCA	-36604965	True	NA	NA	False	NA	NA	NA	36605243	36582397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36582705_36587401_36587458_36589614_36589702_36605125
WTC11_00049945	chr19	-	7524	6	NNC	ENSG00000267041.6	novel	7712	5	NA	NA	0	97	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	10.0598210719674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGTTTTTTTTTTTTT	-36763474	True	NA	96	True	NA	NA	NA	36772807	36743380	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36746632_36746918_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
WTC11_00049947	chr19	-	3847	6	NIC	ENSG00000245680.11	novel	2732	6	NA	NA	2188	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	11.8760262714428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCTGTGAGTTGTTTG	-37208250	False	NA	-3	True	AATATA	-15	NA	37208296	37184820	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37186929_37187098_37187245_37189660_37189754_37190023_37190151_37198938_37199055_37207039
WTC11_00049948	chr19	-	1548	1	FSM	ENSG00000276846.1	ENST00000611171.1	753	1	-831	36	-831	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTAATATTTCTCAATA	-37316208	False	NA	NA	False	NA	NA	NA	37316451	37314903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37314900_37316500
WTC11_00049949	chr19	-	284	1	FSM	ENSG00000279936.1	ENST00000624962.1	2443	1	1239	920	1239	-920	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCAGAGGAAGCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	37402607	37402323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37402300_37402600
WTC11_00049953	chr19	-	2675	4	FSM	ENSG00000180479.14	ENST00000593133.5	2904	4	222	7	222	0	multi-exon	FALSE	canonical	2	5	junction_3	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-37594081	False	NA	-6	True	ATTAAA	-19	NA	37594524	37564259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594086
WTC11_00049954	chr19	-	453	4	FSM	ENSG00000189144.15	ENST00000585724.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATACTGGTGAGAAA	-37779123	True	NA	NA	False	NA	NA	NA	37779563	37739945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37740195_37770004_37770098_37773660_37773752_37779543
WTC11_00049955	chr19	-	838	3	NNC	ENSG00000189144.15	novel	2266	3	NA	NA	8	-13779	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	1.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGCTTTTCACTGG	-37817175	True	NA	NA	False	AATAAA	-17	NA	37817284	37807813	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_37808232_37810604_37810801_37817060
WTC11_00049956	chr19	-	1215	3	FSM	ENSG00000167641.11	ENST00000591585.1	949	3	-91	-175	-91	175	multi-exon	FALSE	canonical	3	334	junction_2	2.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTTGGATCTCTATC	-38256597	False	NA	NA	False	NA	NA	NA	38256623	38251689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38252339_38252893_38252975_38256138
WTC11_00049957	chr19	-	936	6	FSM	ENSG00000167645.17	ENST00000592246.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	432.535131521129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGAGATCTCCAGCT	-38309392	False	NA	-96	True	NA	NA	NA	38309643	38305197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309404
WTC11_00049959	chr19	-	2628	31	FSM	ENSG00000104814.13	ENST00000396857.7	2631	31	0	3	0	0	multi-exon	FALSE	canonical	1	4	junction_30	24.6041776037232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCATCTTGTTTTTCT	-38617859	False	94	-6	True	AATAAA	-16	NA	38617953	38587643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
WTC11_00049960	chr19	-	413	5	NNC	ENSG00000104814.13	novel	2654	32	NA	NA	-371	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	22.8089894559141	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTCATCTTGTTTTT	-38595476	True	NA	-8	True	AATAAA	-14	NA	38596101	38587645	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
WTC11_00049963	chr19	-	317	1	FSM	ENSG00000182472.9	ENST00000601685.1	2552	1	-14	2249	-9	-804	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGGGGATTGGACT	-38735398	False	288	NA	False	NA	NA	NA	38735686	38735369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38735400_38735700
WTC11_00049965	chr19	-	878	5	NNC	ENSG00000187994.14	novel	3058	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_1	13.6930639376292	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTTGTGTGTGT	-38869242	True	NA	-5	True	ATTAAA	-22	NA	38870043	38867829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38868194_38869049_38869167_38869246_38869411_38869572_38869705_38869942
WTC11_00049966	chr19	-	2689	12	NNC	ENSG00000187994.14	novel	3058	12	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.2446162078552	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTTGTGTGTGT	-38876274	False	NA	-5	True	ATTAAA	-22	NA	38876414	38867829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870074_38870137_38870261_38870569_38870652_38870747_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330
WTC11_00049967	chr19	-	574	3	FSM	ENSG00000187994.14	ENST00000598048.1	596	3	22	0	6	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCACCTCCCCTGAGG	-38878111	True	NA	NA	False	NA	NA	NA	38878251	38873885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38873989_38876330_38876782_38878231
WTC11_00049969	chr19	-	1856	16	NNC	ENSG00000104835.15	novel	1924	16	NA	NA	59	0	intron_retention	FALSE	canonical	0	0	junction_5	125.413874830499	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924816	True	NA	-9	True	AATAAA	-14	NA	38930699	38915265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918527_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
WTC11_00049976	chr19	-	760	4	FSM	ENSG00000105204.14	ENST00000601972.1	772	4	0	12	0	-12	multi-exon	FALSE	canonical	3	36	junction_3	19.3620476419435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACTCAACATAAGGTCG	-39830994	False	3158	NA	False	TTTAAA	-4	NA	39834152	39830217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39830564_39830663_39830784_39831804_39831969_39834022
WTC11_00049982	chr19	-	910	4	FSM	ENSG00000090013.11	ENST00000643519.1	938	4	0	28	0	2	multi-exon	FALSE	canonical	0	0	junction_3	186.005376266386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCGACTGTGTGACTCT	-40463310	True	NA	-9	True	AATAAA	-32	NA	40465764	40447792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40451363_40451493_40458173_40458546_40465609
WTC11_00049987	chr19	-	1510	8	NIC	ENSG00000188493.15	novel	1792	9	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	58.3497547342833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAATGTTCTGTTTAT	-40749492	False	NA	-6	True	AATAAA	-17	NA	40749603	40740857	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40741865_40742072_40742190_40742514_40742771_40743914_40743982_40744558_40744684_40745129_40745199_40749480
WTC11_00049988	chr19	-	1290	10	NIC	ENSG00000188493.15	novel	947	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	58.1596355720748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747787	True	NA	-9	True	AATAAA	-14	NA	40750472	40740860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741009_40741365_40741440_40741693_40741865_40742072_40742190_40742576_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
WTC11_00049989	chr19	-	1709	9	NIC	ENSG00000188493.15	novel	947	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	56.3266144908426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747787	True	NA	-9	True	AATAAA	-14	NA	40750472	40740860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40741865_40742072_40742190_40742514_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
WTC11_00049996	chr19	-	1914	6	NIC	ENSG00000160570.14	novel	1905	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	88.3008493730383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-42214852	True	NA	-8	True	ATTAAA	-28	NA	42217664	42198597	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_42199830_42202050_42202073_42209699_42209841_42215132_42215253_42216679_42217046_42217631
WTC11_00050004	chr19	-	2132	18	NNC	ENSG00000073050.12	novel	2052	17	NA	NA	0	11368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.2498256981948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTTAATGGCAGCCT	-43573087	True	NA	NA	False	NA	NA	NA	43575563	43531942	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43531969_43543292_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
WTC11_00050005	chr19	-	1888	16	NIC	ENSG00000073050.12	novel	2052	17	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	52.0241824112168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43572998	True	NA	-18	True	AATAAA	-17	NA	43575474	43543310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43574909_43575003_43575407
WTC11_00050006	chr19	-	2134	17	NNC	ENSG00000073050.12	novel	2052	17	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	48.6863366356517	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43573136	True	NA	-18	True	AATAAA	-17	NA	43575612	43543310	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553510_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
WTC11_00050007	chr19	-	2002	17	NIC	ENSG00000073050.12	novel	2052	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_16	50.4745836411753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43580113	True	NA	-18	True	AATAAA	-17	NA	43580434	43543310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43580364
WTC11_00050016	chr19	-	1023	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	20.2385770250776	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTAAACAGTCATCAG	-44500495	False	NA	NA	False	CATAAA	-35	NA	44500522	44477789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
WTC11_00050017	chr19	-	757	2	NNC	ENSG00000266903.2	novel	876	2	NA	NA	-714	-7	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTATAAATTACCCAGT	-44719285	True	NA	NA	False	ATTAAA	-7	NA	44719473	44715570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_44716084_44719229
WTC11_00050022	chr19	-	433	3	FSM	ENSG00000007255.10	ENST00000587818.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	95.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGCTCTGTCTGATC	-45172611	True	NA	NA	False	NA	NA	NA	45178211	45164724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45164971_45165126_45165195_45178092
WTC11_00050029	chr19	-	2762	22	NIC	ENSG00000125746.18	novel	2791	22	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_19	28.5448288878358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45643042	True	NA	-19	True	AATAAA	-15	NA	45643699	45609399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641746_45641917_45642042_45642133_45642353_45643578
WTC11_00050030	chr19	-	3057	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-2072	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGACTGGTTTGTG	-45715791	True	NA	-3	True	TATAAA	-18	NA	45717350	45710625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45713574_45717241
WTC11_00050031	chr19	-	654	2	FSM	ENSG00000177051.6	ENST00000586899.1	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCCTGCAGAGCTACCC	-45720143	False	NA	NA	False	NA	NA	NA	45723496	45712943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45713574_45723472
WTC11_00050035	chr19	-	3005	16	NNC	ENSG00000104936.20	novel	2920	16	NA	NA	-153	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_15	22.1313252101079	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCGACCCTCGC	-45780884	False	NA	-56	True	NA	NA	NA	45780900	45769763	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45770205_45770231_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45780322
WTC11_00050048	chr19	-	1379	12	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	49.7507838718926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47483838	False	2719	-16	True	NA	NA	NA	47483856	47475149	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483828
WTC11_00050050	chr19	-	2995	27	NIC	ENSG00000105486.14	novel	3125	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_21	128.143901405629	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTGTGACAGGGTCT	-48164283	True	NA	-13	True	AATAAA	-14	NA	48170326	48115448	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
WTC11_00050051	chr19	-	2617	12	FSM	ENSG00000105483.18	ENST00000520153.5	2617	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	14.6851248738982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGAGTCAGTTTTTT	-48248900	False	NA	0	True	TTTAAA	-22	NA	48249826	48210786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249522_48249634_48249750
WTC11_00050057	chr19	-	2340	10	NNC	ENSG00000105538.10	novel	3199	12	NA	NA	1197	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	12.6500866146452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCGATTGTTAAGACTCA	-48737494	False	61	-21	True	AATAAA	-22	NA	48737508	48720582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48737452
WTC11_00050060	chr19	-	793	7	NIC	ENSG00000087076.9	novel	991	8	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	42.1877417688546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-48836418	False	NA	-11	True	CATAAA	-13	NA	48836429	48813023	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48832665_48832733_48834275_48834359_48835804_48835844_48836323
WTC11_00050071	chr19	-	2188	12	NNC	ENSG00000074219.14	novel	2167	12	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	142.309696039226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49361487	False	NA	-3	True	GATAAA	-18	NA	49361533	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49361395
WTC11_00050073	chr19	-	2126	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	122.372382505204	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	-49356578	True	NA	-3	True	GATAAA	-18	NA	49362397	49340593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
WTC11_00050079	chr19	-	2874	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	158.711915816747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-49665842	False	NA	-36	True	AATAAA	-14	NA	49665857	49659574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
WTC11_00050081	chr19	-	1358	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	88.3043278723509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810547	True	NA	0	True	AATAAA	-41	NA	49813143	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
WTC11_00050082	chr19	-	1421	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	71.3148124104369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810587	True	NA	0	True	AATAAA	-41	NA	49813183	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
WTC11_00050084	chr19	-	1709	11	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	71.866264686569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810674	True	NA	0	True	AATAAA	-41	NA	49813270	49806865	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
WTC11_00050087	chr19	-	4942	17	Fusion	ENSG00000213024.12_ENSG00000039650.12	novel	1665	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	82.1821291020743	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49918221	True	NA	-28	True	NA	NA	NA	49929504	49861230	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865623_49906824_49909885_49927693_49927816_49929325
WTC11_00050088	chr19	-	4796	16	Fusion	ENSG00000213024.12_ENSG00000039650.12	novel	1665	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	83.0219248150752	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49918221	True	NA	-28	True	NA	NA	NA	49929504	49861230	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865623_49906824_49909885_49929349
WTC11_00050089	chr19	-	3265	3	NNC	ENSG00000213024.12	novel	3361	3	NA	NA	0	2998	intron_retention	FALSE	non_canonical	0	0	junction_1	140	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACATATAACAGTATAATA	-49918221	True	NA	NA	False	NA	NA	NA	49929504	49903826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49903853_49906824_49909885_49929325
WTC11_00050090	chr19	-	3674	4	NNC	ENSG00000213024.12	novel	782	4	NA	NA	5	2998	intron_retention	FALSE	non_canonical	0	0	junction_1	55.4276304943863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACATATAACAGTATAATA	-49929230	False	NA	NA	False	NA	NA	NA	49929758	49903826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49903853_49906824_49909885_49927693_49927849_49929325
WTC11_00050094	chr19	-	1775	14	NIC	ENSG00000105053.11	novel	2126	15	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	55.2749983608049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTTTGGTAATAAAT	-50022565	True	NA	-38	True	NA	NA	NA	50025402	49976499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
WTC11_00050097	chr19	-	2695	11	NNC	ENSG00000213023.11	novel	2526	11	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	71.5273374312228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCCTCCTGTCCTCTC	-50639077	True	NA	-1	True	AATAAA	-24	NA	50639814	50621977	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639400_50639789
WTC11_00050103	chr19	-	1437	2	FSM	ENSG00000262874.2	ENST00000570516.1	788	2	0	-649	0	1	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGTGTGTGCGCGCGCC	-51390188	True	NA	-21	True	AATAAA	-20	NA	51390563	51388287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51389510_51390348
WTC11_00050108	chr19	-	3472	5	NIC	ENSG00000198093.11	novel	3192	5	NA	NA	9	0	intron_retention	FALSE	canonical	3	24	junction_3	110.313190507754	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-51898624	True	NA	-9	True	AATAAA	-15	NA	51905002	51889234	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_51891898_51896471_51896568_51896851_51896979_51899797_51900295_51904913
WTC11_00050113	chr19	-	1059	5	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	81	-12	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	4.26468052730799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTTTATAAATTACC	-52397103	True	NA	NA	False	ATTAAA	-4	NA	52397676	52388853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52389304_52394790_52394848_52395597_52395751_52396315_52396500_52397461
WTC11_00050115	chr19	-	2877	7	NNC	ENSG00000167766.20	novel	2890	6	NA	NA	-55	0	at_least_one_novel_splicesite	TRUE	canonical	2	18	junction_4	24.589970855344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	-52689536	True	NA	-26	True	AATAAA	-15	NA	52690559	52612377	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52613677_52613760_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
WTC11_00050119	chr19	-	1688	2	Genic_Genomic	ENSG00000288953.1	novel	1308	1	NA	NA	-61664	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTTTGGTGGCCTC	NA	False	NA	-4	True	AATAAA	-19	NA	52762324	52699355	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_52700794_52762074
WTC11_00050122	chr19	-	4252	6	NIC	ENSG00000204604.13	novel	4027	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	27.0303533088267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52855941	True	NA	-5	True	AATAAA	-18	NA	52857619	52838535	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52842152_52845178_52845297_52849086_52849214_52853871_52854127_52854257_52854346_52857571
WTC11_00050126	chr19	-	6027	3	FSM	ENSG00000182986.15	ENST00000391781.6	6074	3	47	0	47	0	multi-exon	FALSE	canonical	3	48	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTTCTTTCTTTATG	-52887528	False	NA	-4	True	ATTAAA	-23	NA	52890328	52876171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52881984_52888126_52888254_52890240
WTC11_00050131	chr19	-	2581	5	FSM	ENSG00000170954.12	ENST00000600120.5	2581	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.405162319306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131807	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53115703_53115925_53116312_53116434_53122661_53122744_53132748
WTC11_00050133	chr19	-	3775	5	NIC	ENSG00000197928.11	novel	796	5	NA	NA	10	-2	intron_retention	FALSE	canonical	3	48	junction_1	119.031508433692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGATGGAAAGCCTGT	-53251821	True	NA	-11	True	AATAAA	-18	NA	53254811	53238598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254598
WTC11_00050141	chr19	-	1016	14	FSM	ENSG00000105048.18	ENST00000587758.5	1016	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	383.890409041234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147621	False	2141	-2	True	NA	NA	NA	55149193	55132793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55147998_55148094_55149160
WTC11_00050145	chr19	-	841	8	FSM	ENSG00000129991.13	ENST00000344887.10	843	8	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_6	238.981000013279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-55157468	False	NA	-3	True	AATAAA	-20	NA	55157730	55151766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602_55156645_55157049_55157134_55157295_55157309_55157578
WTC11_00050147	chr19	-	1567	8	FSM	ENSG00000129990.15	ENST00000537500.5	2612	8	1045	0	331	0	multi-exon	FALSE	canonical	0	0	junction_3	4.22335585688414	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGGCCCATGCTCCTTG	NA	False	NA	0	True	AATAAA	-19	NA	55179059	55173095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55173685_55174516_55174651_55174881_55175000_55175171_55175340_55175708_55175877_55176004_55176125_55178195_55178369_55178962
WTC11_00050158	chr19	-	953	6	NIC	ENSG00000196724.13	novel	597	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	14.0228385143665	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACTCATGCCTTTAAT	-57933282	True	NA	-5	True	AATAAA	-19	NA	57935359	57922260	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930558_57933816_57933903_57935160
WTC11_00050170	chr19	+	1634	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCATCTCGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	16973329	16974963	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_16973300_16975000
WTC11_00050171	chr19	+	333	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTTCTCATGGAGCAA	NA	False	NA	NA	False	NA	NA	NA	20095917	20096250	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20095900_20096200
WTC11_00050172	chr19	+	1015	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCCTGCCCCACCTTA	NA	False	NA	NA	False	NA	NA	NA	20159918	20160933	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20159900_20160900
WTC11_00050173	chr19	+	1213	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	24053983	False	NA	NA	False	NA	NA	NA	24053996	24055209	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_24054000_24055200
WTC11_00050174	chr1_KI270711v1_random	-	2969	11	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	36	junction_7	10.2742396312331	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	18432	4610	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_KI270711v1_random_-_6371_6990_7103_7816_7990_8603_8656_9364_9538_10139_10192_10910_11084_11706_11759_12800_12965_16870_16923_18226
WTC11_00050177	chr1_KI270713v1_random	+	828	3	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCATTCCCTTGCCTAT	13494	False	NA	NA	False	AATAAA	-10	NA	13521	25182	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_KI270713v1_random_+_13769_20439_20577_24738
WTC11_00050179	chr1_KI270714v1_random	+	2585	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACCACCCAAGGAACTTG	17595	False	NA	NA	False	NA	NA	NA	17630	20215	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_KI270714v1_random_+_17600_20200
WTC11_00050181	chr2	+	1358	4	FSM	ENSG00000143727.16	ENST00000405233.5	1149	4	-209	0	-152	0	multi-exon	FALSE	canonical	3	235	junction_3	1153.94867977547	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGAAGAGGGAAACAGAGG	264699	False	NA	NA	False	NA	NA	NA	264716	273155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272066_272191
WTC11_00050182	chr2	+	1349	4	FSM	ENSG00000143727.16	ENST00000480874.5	732	4	-219	-398	-152	398	multi-exon	FALSE	canonical	3	2047	junction_3	302.963510820839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTTGCTGACACCAT	264699	False	NA	NA	False	NA	NA	NA	264716	276009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272151_275139
WTC11_00050187	chr2	+	1495	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	-21	0	0	0	multi-exon	FALSE	canonical	3	2047	junction_3	312.497423989383	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245891	True	NA	94	True	AATAAA	-36	NA	264925	278283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
WTC11_00050188	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	1063.42826117546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	245930	True	NA	NA	False	NA	NA	NA	264964	277375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
WTC11_00050191	chr2	+	1915	17	FSM	ENSG00000172554.12	ENST00000308624.10	1907	17	-8	0	-8	0	multi-exon	FALSE	canonical	3	40	junction_14	25.8087164297258	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGTCCTCCTTGTTAAA	947190	True	NA	12	True	AATAAA	-21	NA	950840	1367613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
WTC11_00050192	chr2	+	1989	8	NNC	ENSG00000172554.12	novel	666	8	NA	NA	10	5706	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	35.0253552473645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCATTAGTCATGTGT	947227	True	NA	NA	False	NA	NA	NA	950877	1171341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1169970
WTC11_00050193	chr2	+	1301	7	NNC	ENSG00000172554.12	novel	1818	8	NA	NA	22	-1537	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	39.104205514099	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTACTGACCTCTTTAT	947239	True	NA	NA	False	AATAAA	-33	NA	950889	1160134	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1159351
WTC11_00050194	chr2	+	2518	12	FSM	ENSG00000171853.16	ENST00000324266.10	2499	12	-19	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	16.764780083248	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	3375577	True	NA	12	True	AATAAA	-13	NA	3379674	3479565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
WTC11_00050196	chr2	+	1538	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATATGGAAAAATATA	3375622	True	NA	1	True	AATAAA	-14	NA	3379719	3389000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3379877_3387619
WTC11_00050197	chr2	+	4447	9	NNC	ENSG00000171853.16	novel	2499	12	NA	NA	0	2310	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	43.4523805446836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTATTGACGATGGGCC	3375622	True	NA	45	True	NA	NA	NA	3379719	3463252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3460643
WTC11_00050201	chr2	+	3321	7	FSM	ENSG00000171853.16	ENST00000497597.5	3401	7	80	0	80	0	multi-exon	FALSE	canonical	1	1	junction_1	52.3757789653025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCTGCGTGTCTT	NA	False	NA	13	True	AATAAA	-14	NA	3454691	3479566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3457230_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
WTC11_00050205	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	74	junction_1	24	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	3558173	True	NA	NA	False	NA	NA	NA	3558473	3564842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3558999_3559447_3559730_3561316
WTC11_00050206	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	51	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	3558553	False	NA	NA	False	AATAAA	-36	NA	3558577	3561731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3558999_3561316
WTC11_00050207	chr2	+	1290	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	-18	3	11	-3	multi-exon	FALSE	canonical	3	46	junction_1	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	3558449	3561731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3558999_3559403_3559730_3561316
WTC11_00050208	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_1	2006.39458288299	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	3398566	True	NA	4	True	AATAAA	-20	NA	3575259	3580920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
WTC11_00050209	chr2	+	916	6	FSM	ENSG00000171863.15	ENST00000462576.5	907	6	-9	0	0	0	multi-exon	FALSE	canonical	3	8437	junction_5	1662.60884154993	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398622	True	NA	3	True	AATAAA	-19	NA	3575315	3580919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
WTC11_00050210	chr2	+	773	7	FSM	ENSG00000171863.15	ENST00000403564.5	764	7	-9	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4488.40633991868	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398622	True	NA	3	True	AATAAA	-19	NA	3575315	3580919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575449_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
WTC11_00050211	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	3	561	junction_1	4366.22497766154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	3398664	True	NA	-15	True	AATAAA	-1	NA	3575357	3580901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
WTC11_00050212	chr2	+	5426	2	FSM	ENSG00000171863.15	ENST00000481006.1	5429	2	0	3	0	-3	multi-exon	FALSE	canonical	3	12304	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGTTTCAGTTATG	3398664	True	NA	-1	True	AATAAA	-15	NA	3575357	3580915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816
WTC11_00050213	chr2	+	411	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTACCCCAAATCAGATAG	5002438	False	NA	NA	False	AAAAAG	-43	NA	5002451	5002862	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5002500_5002900
WTC11_00050214	chr2	+	910	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCTTCATTTTCACT	5003348	False	NA	NA	False	NA	NA	NA	5003361	5004271	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5003400_5004300
WTC11_00050215	chr2	+	9561	1	FSM	ENSG00000176887.7	ENST00000322002.5	9002	1	21	-580	21	580	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGTGTTGTATTGTAAA	5691159	True	NA	7	True	ATTAAA	-17	NA	5692404	5701965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_5692400_5702000
WTC11_00050216	chr2	+	5738	9	FSM	ENSG00000151692.15	ENST00000320892.11	5720	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	24	junction_4	7.96770826524164	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCGTGGCTCCGTCTTT	6916465	True	NA	22	True	AATACA	-16	NA	6917393	7044179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_6917623_6940947_6941148_6996915_6997062_7014453_7014559_7014711_7014773_7020472_7020681_7024368_7024517_7030125_7030216_7039628
WTC11_00050217	chr2	+	378	1	FSM	ENSG00000272002.1	ENST00000606959.1	634	1	191	65	191	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTGTTATCTATTCT	NA	False	NA	NA	False	GATAAA	-40	NA	7261061	7261439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_7261100_7261400
WTC11_00050218	chr2	+	386	2	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCTTTACAATCTGT	NA	False	NA	NA	False	GATAAA	-19	NA	7872813	7878932	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_7872972_7878704
WTC11_00050219	chr2	+	2907	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCACTGGTTTTTTAA	7876543	False	NA	-31	True	NA	NA	NA	7876601	7892299	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7878482_7891272
WTC11_00050220	chr2	+	3035	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	290	junction_1	76.5	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCACTGGTTTTTTAA	7876543	False	NA	-31	True	NA	NA	NA	7876601	7892299	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7878482_7883431_7883560_7891272
WTC11_00050221	chr2	+	1301	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	134	junction_2	8	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGAGTGGTTTTTAAGA	8680701	True	NA	NA	False	AATAAA	-24	NA	8682052	8684460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_8682514_8682842_8682907_8683684
WTC11_00050222	chr2	+	5592	27	FSM	ENSG00000151693.11	ENST00000315273.4	5582	27	-10	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_22	14.8946994265046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATGTTTTTA	9204348	True	NA	16	True	AATAAA	-21	NA	9206754	9405683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9207231_9279316_9279390_9297299_9297446_9318523_9318599_9320287_9320338_9323120_9323251_9327825_9327912_9334737_9334814_9335092_9335180_9344531_9344636_9344730_9344801_9350807_9350896_9356046_9356096_9356178_9356346_9358755_9358890_9368424_9368520_9374754_9374945_9376907_9376994_9378943_9379060_9380740_9380809_9385244_9385359_9388293_9388547_9393481_9393648_9400022_9400073_9400741_9400831_9401273_9401397_9403252
WTC11_00050226	chr2	+	2262	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	-3	0	0	0	multi-exon	TRUE	canonical	3	819	junction_4	78.9118907718622	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	9413667	True	NA	22	True	AATAAA	-23	NA	9423650	9473101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
WTC11_00050227	chr2	+	3157	18	FSM	ENSG00000119203.14	ENST00000460593.1	3157	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.024801848166	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGGAGCCTGTTTACT	9413900	False	NA	13	True	AATAAA	-14	NA	9423883	9473092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9424961_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
WTC11_00050229	chr2	+	601	4	FSM	ENSG00000134330.19	ENST00000496603.5	670	4	69	0	69	0	multi-exon	FALSE	canonical	3	18	junction_1	57.0457905740838	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTACGGTGGCTTGCTCGG	NA	False	NA	NA	False	NA	NA	NA	9473726	9484548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431
WTC11_00050231	chr2	+	1086	5	FSM	ENSG00000134330.19	ENST00000492223.5	818	5	-268	0	-266	0	multi-exon	FALSE	canonical	2	5	junction_1	56.1003565051061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGAAGTTTTATACT	9473812	False	NA	5	True	AATAAA	-15	NA	9474270	9488457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9474648_9478253_9478371_9481285_9481448_9484431_9484551_9488146
WTC11_00050232	chr2	+	2190	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	-14	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	18.8997354478839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473106	True	NA	NA	False	NA	NA	NA	9474536	9489742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
WTC11_00050233	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.5210239064986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473106	True	NA	NA	False	NA	NA	NA	9474536	9489742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
WTC11_00050235	chr2	+	924	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	-66	19	-66	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTAAAAACGTTGGGTAC	NA	False	NA	13	True	AATAAA	-3	NA	9555832	9556756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9555800_9556800
WTC11_00050236	chr2	+	528	5	FSM	ENSG00000115750.17	ENST00000404869.7	505	5	-23	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	39.9147529116741	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACCAATCACTGGAC	9840467	True	NA	NA	False	NA	NA	NA	9843473	9852124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9851967
WTC11_00050237	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_11	9.27169271030299	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	9840467	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
WTC11_00050238	chr2	+	3625	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	-16	-41	-16	41	multi-exon	FALSE	canonical	1	8	junction_10	6.96531087285812	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACGTGAGAGCTGAAA	9951448	True	NA	52	True	NA	NA	NA	9951676	10002318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
WTC11_00050239	chr2	+	4035	4	FSM	ENSG00000172059.11	ENST00000305883.6	4035	4	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	10043001	True	NA	7	True	TATAAA	-17	NA	10043549	10054836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10043759_10046149_10046420_10047649_10048596_10052226
WTC11_00050240	chr2	+	3682	10	FSM	ENSG00000171848.16	ENST00000360566.6	3673	10	-9	0	-9	0	multi-exon	FALSE	canonical	3	905	junction_2	40.7679370505551	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGGTAAAATTTGCA	10122305	False	NA	24	True	AATAAA	-20	NA	10122318	10131418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
WTC11_00050245	chr2	+	1771	5	FSM	ENSG00000115756.13	ENST00000307845.8	1749	5	-22	0	-7	0	multi-exon	FALSE	canonical	3	93	junction_4	6.57647321898295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	10301625	True	NA	13	True	AATAAA	-1	NA	10302881	10427604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10303178_10396834_10396921_10419733_10420136_10422982_10423089_10426723
WTC11_00050246	chr2	+	1789	1	FSM	ENSG00000243819.4	ENST00000607781.1	1756	1	-191	158	-191	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTAAAATGGAGATAACA	10690119	False	NA	NA	False	NA	NA	NA	10690152	10691941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10690200_10691900
WTC11_00050248	chr2	+	1761	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	22	1	22	-1	multi-exon	FALSE	canonical	3	25	junction_5	60.8013157752363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTGTCAATCATTAAT	11153143	True	NA	29	True	AATAAA	-29	NA	11155393	11178869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
WTC11_00050249	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	33.4784341861377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	11153216	True	NA	16	True	AATAAA	-16	NA	11155466	11178856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
WTC11_00050250	chr2	+	439	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	0	14	0	-14	multi-exon	FALSE	canonical	3	178	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	11153264	True	NA	NA	False	ACTAAA	-2	NA	11155514	11160805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624
WTC11_00050253	chr2	+	1624	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	494	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	4.29793231940921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	11480517	True	NA	4	True	AATAAA	-17	NA	11482834	11581265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
WTC11_00050254	chr2	+	8343	32	FSM	ENSG00000196208.14	ENST00000234142.9	8444	32	101	0	101	0	multi-exon	FALSE	canonical	3	23	junction_8	11.7167400721717	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGTTGGTGAGTA	NA	False	NA	6	True	AATAAA	-15	NA	11556453	11642786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703_11580833_11585160_11585275_11585761_11585906_11588745_11588932_11592775_11593127_11595250_11595380_11596110_11596240_11597780_11597979_11598679_11598861_11600799_11600996_11602405_11602543_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
WTC11_00050255	chr2	+	5382	20	FSM	ENSG00000134324.12	ENST00000256720.6	5384	20	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_2	7.49958447602395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	11745801	True	NA	19	True	AATAAA	-29	NA	11746589	11827409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
WTC11_00050256	chr2	+	5461	21	FSM	ENSG00000134324.12	ENST00000674199.1	5448	21	-14	1	-14	-1	multi-exon	FALSE	canonical	2	5	junction_6	13.494813818649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTGTGTGAATTTTAA	11745829	True	NA	18	True	AATAAA	-28	NA	11746617	11827408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11776085_11776194_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
WTC11_00050257	chr2	+	258	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAAGGACACCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	12570214	12570472	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12570200_12570500
WTC11_00050259	chr2	+	1593	6	NNC	ENSG00000071575.12	novel	830	3	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	175.839244766349	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTCTCATTTAGAAG	12711105	True	NA	18	True	AATAAA	-19	NA	12716885	12724821	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_12717011_12717251_12717686_12717836_12718129_12718321_12718578_12723259_12723553_12724628
WTC11_00050260	chr2	+	4151	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	119.622554543679	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTGGAGTCTGGAAAAT	12711105	True	NA	75	True	AATAAA	-20	NA	12716885	12742732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
WTC11_00050262	chr2	+	4345	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	-1	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	19.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711154	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_12718578_12723259_12723553_12740325
WTC11_00050265	chr2	+	5776	2	FSM	ENSG00000162981.14	ENST00000295092.3	6319	2	-13	556	4	-556	multi-exon	FALSE	canonical	3	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTTTCAATCATTTAGT	14632515	True	NA	NA	False	ACTAAA	-15	NA	14632703	14639485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_14632938_14633943
WTC11_00050267	chr2	+	2777	26	FSM	ENSG00000079785.16	ENST00000434671.2	2820	26	39	4	39	0	multi-exon	FALSE	canonical	3	1109	junction_11	131.899391962207	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCATGAAGGTTTG	NA	False	NA	2	True	AATAAA	-10	NA	15591570	15631097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
WTC11_00050269	chr2	+	3535	23	FSM	ENSG00000079785.16	ENST00000676759.1	3587	23	63	-11	-50	11	multi-exon	FALSE	canonical	3	1109	junction_11	138.851368302004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCTTATTTTAAAG	15591784	False	NA	17	True	AATAAA	-25	NA	15591795	15631112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15629698_15629989_15630111_15630775
WTC11_00050272	chr2	+	3986	24	FSM	ENSG00000079785.16	ENST00000478695.2	4038	24	63	-11	-50	11	multi-exon	FALSE	canonical	3	1109	junction_11	136.925862682897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCTTATTTTAAAG	15591784	False	NA	17	True	AATAAA	-25	NA	15591795	15631112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
WTC11_00050275	chr2	+	3338	20	FSM	ENSG00000079785.16	ENST00000677649.1	3892	20	565	-11	565	11	multi-exon	FALSE	canonical	3	1109	junction_5	145.247253133876	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCTTATTTTAAAG	15599040	False	NA	17	True	AATAAA	-25	NA	15599060	15631112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15599717_15602547_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
WTC11_00050276	chr2	+	2613	3	FSM	ENSG00000134323.12	ENST00000281043.4	2613	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	154	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	15938881	True	NA	16	True	AATAAA	-16	NA	15940549	15947004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15940744_15941947_15942855_15945492
WTC11_00050277	chr2	+	2558	2	ISM	ENSG00000134323.12	ENST00000281043.4	2613	3	1259	0	1243	0	3prime_fragment	FALSE	canonical	3	519	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	15938614	True	NA	16	True	AATAAA	-16	NA	15941808	15947004	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_15942855_15945492
WTC11_00050278	chr2	+	2499	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	-71	0	71	multi-exon	FALSE	canonical	3	699	junction_1	56.3973994672331	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTGATAGAACCAAAATT	17533872	True	NA	NA	False	AAGAAA	-44	NA	17540695	17657089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
WTC11_00050279	chr2	+	3077	1	FSM	ENSG00000178295.15	ENST00000614478.1	1864	1	-10	-1203	-10	1203	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAAAACAATTGATGAT	17753237	True	NA	NA	False	NA	NA	NA	17753884	17756961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17753900_17757000
WTC11_00050280	chr2	+	6803	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	-253	3407	-10	-3402	multi-exon	FALSE	canonical	3	31	junction_1	13.1828290684709	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTTGTGTAATCAATCT	17753237	True	NA	NA	False	NA	NA	NA	17753884	17785539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
WTC11_00050281	chr2	+	9200	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	27	627	-10	-627	multi-exon	FALSE	canonical	3	11	junction_1	17.8172843413853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGCTGCAGAGTCAGC	17753237	True	NA	NA	False	TATAAA	-2	NA	17753884	17788314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
WTC11_00050283	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	17877190	True	NA	9	True	AATAAA	-20	NA	17878666	17932958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17878807_17917679_17917872_17930949
WTC11_00050284	chr2	+	1737	2	NNC	ENSG00000170745.12	novel	2341	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	53	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	17877190	True	NA	9	True	AATAAA	-20	NA	17878666	17932958	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_17878807_17931361
WTC11_00050285	chr2	+	1131	3	FSM	ENSG00000227210.2	ENST00000416575.2	1132	3	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	2	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTGAAATAAATTATATT	19990119	True	NA	NA	False	AATAAA	-18	NA	19990210	20004794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_19990495_19999205_19999278_20004019
WTC11_00050287	chr2	+	1371	2	FSM	ENSG00000143869.7	ENST00000272224.5	9267	2	225	7671	225	-7671	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCGTGCAGTCACGCAC	20667358	True	NA	NA	False	NA	NA	NA	20667368	20671572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_20667631_20670463
WTC11_00050288	chr2	+	3043	7	FSM	ENSG00000119771.15	ENST00000288548.5	3043	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	7.1043804953157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATCCGTCATTCTGTCT	NA	False	NA	36	True	AGTAAA	-6	NA	23642391	23697932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23642851_23684398_23684538_23691673_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332
WTC11_00050289	chr2	+	5967	8	FSM	ENSG00000119771.15	ENST00000471654.1	6385	8	413	5	413	0	multi-exon	FALSE	canonical	2	9	junction_5	9.89743318610787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAGCCAACGTAATCT	NA	False	NA	5	True	AATAAA	-19	NA	23689197	23708606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332_23696514_23703185_23703380_23703718_23703864_23706480
WTC11_00050292	chr2	+	202	1	ISM	ENSG00000205639.12	ENST00000495018.1	1156	6	5562	71	971	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTCTGGTTTCCTATT	24018450	False	NA	NA	False	NA	NA	NA	24018460	24018662	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_24018500_24018700
WTC11_00050294	chr2	+	935	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	-10	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	156.597147696459	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044744	True	NA	19	True	AATAAA	-19	NA	24049730	24063681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
WTC11_00050295	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	311.078510990393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044744	True	NA	19	True	AATAAA	-19	NA	24049730	24063681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
WTC11_00050299	chr2	+	7313	23	FSM	ENSG00000084676.16	ENST00000348332.8	7381	23	0	68	0	-68	multi-exon	TRUE	canonical	3	19	junction_22	22.0522014043238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAAATTGCCAAAGCCC	24491066	True	NA	54	True	AAGAAA	-14	NA	24491253	24770634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24491603_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768220
WTC11_00050300	chr2	+	501	3	FSM	ENSG00000084676.16	ENST00000496333.5	501	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTGGAACTCAAGATTT	24491897	False	NA	NA	False	AAAACA	-27	NA	24491913	24644055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24492189_24564294_24564431_24643965
WTC11_00050301	chr2	+	7196	23	FSM	ENSG00000084676.16	ENST00000406961.5	7289	23	-18	111	0	-111	multi-exon	FALSE	canonical	0	0	junction_1	28.022128210068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGCCTCTTCATTTAC	24491897	False	NA	11	True	AATAGA	-19	NA	24491913	24770591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24492189_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768220
WTC11_00050304	chr2	+	6717	21	FSM	ENSG00000084676.16	ENST00000395856.3	6828	21	0	111	0	-111	multi-exon	FALSE	canonical	3	13	junction_20	20.9842798303873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGCCTCTTCATTTAC	NA	False	NA	11	True	AATAGA	-19	NA	24584540	24770591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768223
WTC11_00050306	chr2	+	5047	7	FSM	ENSG00000138092.11	ENST00000473706.5	4272	7	0	-775	0	775	multi-exon	FALSE	canonical	3	67	junction_1	58.3666571482954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTGGAATGGGCCGG	24792897	True	NA	NA	False	AATGAA	-36	NA	24793144	24823151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793502_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
WTC11_00050308	chr2	+	4881	8	FSM	ENSG00000138092.11	ENST00000380834.7	4106	8	0	-775	0	775	multi-exon	FALSE	canonical	3	59	junction_1	60.2196659179151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTGGAATGGGCCGG	24788260	True	NA	NA	False	AATGAA	-36	NA	24793424	24823151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
WTC11_00050311	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	69.4732366616447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	24788297	True	NA	13	True	AATAAA	-16	NA	24793461	24822373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
WTC11_00050317	chr2	+	1315	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	-23	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	594.771384651279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	26034049	False	NA	22	True	ATTAAA	-33	NA	26034083	26135347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
WTC11_00050319	chr2	+	903	2	NNC	ENSG00000084733.11	novel	1292	5	NA	NA	-11	-41183	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATGAAAAATTTACTA	26024231	True	NA	9	True	AATAAA	-21	NA	26034095	26093853	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_26034736_26093590
WTC11_00050322	chr2	+	914	2	ISM	ENSG00000157833.13	ENST00000401533.7	4164	6	4	12647	4	-10442	5prime_fragment	FALSE	canonical	3	177	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCTAATGGACTACC	26171889	True	NA	12	True	ATTAAA	-18	NA	26173091	26177016	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_26173333_26176343
WTC11_00050325	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	141.73093580184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	26244737	True	NA	13	True	AATAAA	-16	NA	26244747	26290464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
WTC11_00050326	chr2	+	2033	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	-37	1	-18	0	multi-exon	FALSE	canonical	3	487	junction_12	39.3307343774136	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	26242085	True	NA	13	True	AATAAA	-16	NA	26244901	26290464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
WTC11_00050329	chr2	+	1870	14	FSM	ENSG00000138029.14	ENST00000545822.2	1870	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	146.330743148979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	NA	False	NA	13	True	AATAAA	-16	NA	26261020	26290464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26261064_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
WTC11_00050332	chr2	+	11004	3	NIC	ENSG00000138018.19	novel	8066	10	NA	NA	35022	0	intron_retention	FALSE	canonical	3	95	junction_2	1	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	26381185	False	NA	24	True	AATAAA	-31	NA	26381199	26395885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_26385140_26386353_26386537_26389004
WTC11_00050334	chr2	+	3916	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	-15	1	-15	-1	multi-exon	TRUE	canonical	3	17	junction_2	5.16139516022558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCTGCAGGCTAT	26762795	True	NA	19	True	TATAAA	-19	NA	26764268	26781230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
WTC11_00050335	chr2	+	4440	4	FSM	ENSG00000115163.15	ENST00000233505.12	1299	4	-45	-3096	-4	3096	multi-exon	FALSE	canonical	3	76	junction_2	258.059855244648	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTTGTTGCTAATTT	26781004	True	NA	19	True	AATAAA	-19	NA	26786022	26797685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811
WTC11_00050336	chr2	+	865	6	FSM	ENSG00000115163.15	ENST00000460030.1	745	6	-120	0	-4	0	multi-exon	FALSE	canonical	3	119	junction_5	186.02214921885	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	26781004	True	NA	20	True	AATAAA	-30	NA	26786022	26801067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
WTC11_00050341	chr2	+	1809	7	FSM	ENSG00000084764.12	ENST00000405074.7	1801	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	35	junction_4	11.6714276000077	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	26969922	True	NA	9	True	AATAAA	-18	NA	26970649	27027196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024253_27025582_27025738_27025879_27026033_27026279
WTC11_00050344	chr2	+	3024	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	-74	28	-19	0	multi-exon	TRUE	canonical	2	269	junction_10	29.0446181546599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAGGACACAGATTT	27026902	True	NA	-9	True	NA	NA	NA	27032890	27041666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
WTC11_00050345	chr2	+	2842	16	FSM	ENSG00000119777.20	ENST00000404032.7	2830	16	-12	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	90.2157906848291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTGTCTGCATCCT	27026976	True	NA	18	True	AATAAA	-20	NA	27032964	27041693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
WTC11_00050353	chr2	+	2392	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	-10	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	35.3396378023318	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	27045566	True	NA	16	True	AATAAA	-18	NA	27051667	27059535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
WTC11_00050357	chr2	+	2330	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-4	39	intron_retention	FALSE	canonical	3	41	junction_2	54.1109970338747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATGGGGTCACCTGCCC	27085502	True	NA	70	True	AAAAAG	-24	NA	27086742	27100801	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
WTC11_00050358	chr2	+	2415	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	49	junction_2	54.539257532945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	27085502	True	NA	20	True	TATAAA	-16	NA	27086742	27100751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
WTC11_00050359	chr2	+	1878	3	FSM	ENSG00000138030.13	ENST00000469936.5	553	3	-717	-608	-717	608	multi-exon	FALSE	canonical	3	71	junction_1	55.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTCCTCAACCTTGTGA	27093298	False	NA	NA	False	NA	NA	NA	27093480	27098176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27094612_27096728_27096802_27097502
WTC11_00050363	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	610.948647596506	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	27203516	False	NA	49	True	AATAAA	-37	NA	27212369	27217178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
WTC11_00050376	chr2	+	2027	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	-20	0	-7	0	multi-exon	TRUE	canonical	3	18	junction_3	377.221361478318	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	27361811	True	NA	16	True	ATTAAA	-16	NA	27370607	27377123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
WTC11_00050383	chr2	+	2177	18	ISM	ENSG00000115216.14	ENST00000233557.7	2887	19	841	4	0	0	3prime_fragment	TRUE	canonical	3	1128	junction_4	57.5192460644267	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	27410616	True	NA	25	True	AATAAA	-16	NA	27428630	27442255	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00050385	chr2	+	2861	11	FSM	ENSG00000115216.14	ENST00000460499.5	2561	11	-300	0	-300	0	multi-exon	FALSE	canonical	3	1190	junction_9	42.7312531995026	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	27435265	False	NA	25	True	AATAAA	-16	NA	27435281	27442255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00050386	chr2	+	1505	6	NIC	ENSG00000115216.14	novel	2561	11	NA	NA	-262	-3	intron_retention	FALSE	canonical	3	1190	junction_4	43.0692465687525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAAAGCGTCGTGTGTTC	27440041	False	NA	22	True	AATAAA	-13	NA	27440052	27442252	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00050389	chr2	+	1232	4	ISM	ENSG00000157992.12	ENST00000464699.5	724	5	-390	6	-11	0	intron_retention	FALSE	canonical	3	485	junction_3	30.2691628926573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438666	True	NA	15	True	AATAAA	-15	NA	27442354	27444291	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442902_27443073_27443281_27443397_27443533_27443948
WTC11_00050390	chr2	+	1016	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-26	6	-11	0	intron_retention	FALSE	canonical	3	291	junction_1	96.7479198742795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438666	True	NA	15	True	AATAAA	-15	NA	27442354	27444291	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
WTC11_00050392	chr2	+	863	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_6	140.382809963803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438692	True	NA	15	True	AATAAA	-15	NA	27442380	27444291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
WTC11_00050393	chr2	+	682	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	-17	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	214.791619948265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438692	True	NA	19	True	AATAAA	-19	NA	27442380	27444295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
WTC11_00050394	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	142.700525577168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438757	True	NA	21	True	AATAAA	-21	NA	27442445	27444297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
WTC11_00050395	chr2	+	897	5	NIC	ENSG00000157992.12	novel	942	6	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	217.433179390819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTGTTCTGGGTCTTA	27438757	True	NA	1	True	ATTAAA	-14	NA	27442445	27446477	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27446300
WTC11_00050399	chr2	+	3959	13	NIC	ENSG00000243943.10	novel	3417	14	NA	NA	-24	0	intron_retention	FALSE	canonical	3	107	junction_1	34.5948775912787	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	27578489	True	NA	13	True	AATAAA	-14	NA	27583005	27623094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
WTC11_00050400	chr2	+	3441	14	FSM	ENSG00000243943.10	ENST00000379717.5	3417	14	-24	0	-24	0	multi-exon	FALSE	canonical	3	37	junction_2	59.4058351884549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	27578489	True	NA	13	True	AATAAA	-14	NA	27583005	27623094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
WTC11_00050401	chr2	+	3530	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	-4	5	-4	-3	multi-exon	FALSE	canonical	3	92	junction_1	46.2761200830496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATTCTTTGGTTCATGA	27578521	True	NA	4	True	AATAAA	-20	NA	27583037	27623212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
WTC11_00050405	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_11	63.1183728725863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	27619311	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
WTC11_00050412	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	636.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	27771813	True	NA	9	True	AATAAA	-12	NA	27771974	27779731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27772386_27772673_27772693_27779432
WTC11_00050420	chr2	+	6665	4	FSM	ENSG00000075426.12	ENST00000264716.9	6713	4	-40	88	16	-83	multi-exon	FALSE	canonical	2	7	junction_3	1.24721912892465	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGATTTTTTTGGGGGAGG	28392442	True	NA	-78	True	ATTAAA	-13	NA	28392817	28417229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28393823_28404106_28404359_28408758_28408867_28411929
WTC11_00050421	chr2	+	592	4	FSM	ENSG00000213639.10	ENST00000420282.5	570	4	-22	0	14	0	multi-exon	FALSE	canonical	3	9	junction_1	174.019794531797	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTAGCATCAATCGCAT	28751578	False	NA	NA	False	NA	NA	NA	28751653	28778999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28751784_28752037_28752177_28776850_28776983_28778808
WTC11_00050423	chr2	+	4780	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	-9	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	99.070366406913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	28751689	False	NA	11	True	ATTAAA	-11	NA	28751738	28802930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
WTC11_00050425	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	65.616697725565	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	28732781	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
WTC11_00050426	chr2	+	3318	6	NIC	ENSG00000213639.10	novel	4916	8	NA	NA	12	-7	intron_retention	FALSE	canonical	3	230	junction_5	107.689553810943	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGAGAAAATGATTCTG	28732793	True	NA	13	True	AATAAA	-14	NA	28751841	28801641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28799198
WTC11_00050431	chr2	+	2580	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	15	junction_2	68.9021044671351	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144754	True	NA	9	True	AATAAA	-18	NA	30146920	30160533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
WTC11_00050432	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	17.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30147063_30156627_30156793_30158618
WTC11_00050433	chr2	+	2644	5	FSM	ENSG00000119801.13	ENST00000492439.1	787	5	-71	-1786	-66	0	multi-exon	FALSE	canonical	2	3	junction_1	76.6921606163237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30145719	False	NA	9	True	AATAAA	-18	NA	30147885	30160533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30148092_30148244_30148542_30155849_30155911_30156627_30156793_30158618
WTC11_00050436	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	30232069	True	NA	NA	False	NA	NA	NA	30232152	30257760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30232207_30234404_30234508_30257432
WTC11_00050439	chr2	+	592	4	FSM	ENSG00000172954.14	ENST00000466477.5	583	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	8	junction_3	67.1830004953303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCATAAAATTACCT	30444751	True	NA	NA	False	NA	NA	NA	30447216	30552549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30552492
WTC11_00050442	chr2	+	5068	7	NNC	ENSG00000172954.14	novel	5060	7	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_5	67.1209521850087	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444755	True	NA	13	True	AATAAA	-21	NA	30447220	30644225	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_30447384_30459551_30459723_30525586_30525756_30533115_30533315_30562145_30562293_30568066_30568177_30640116
WTC11_00050443	chr2	+	4908	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	-29	0	-9	0	multi-exon	FALSE	canonical	3	116	junction_4	14.2070405081424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444751	True	NA	13	True	AATAAA	-21	NA	30447216	30644225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
WTC11_00050456	chr2	+	16863	74	NIC	ENSG00000115760.15	novel	15687	74	NA	NA	-1151	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_7	40.7116558140514	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTATGTCTTGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	32355871	32618876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435495_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
WTC11_00050478	chr2	+	704	6	FSM	ENSG00000218739.10	ENST00000406711.5	687	6	-17	0	0	0	multi-exon	TRUE	canonical	3	13	junction_5	364.1298669431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTCCTGAAACAATT	37181631	True	NA	NA	False	AATATA	-2	NA	37196487	37203495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37196521_37198493_37198673_37199703_37199820_37201047_37201093_37201641_37201727_37203249
WTC11_00050479	chr2	+	715	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	-20	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	272.672422514636	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	37181631	True	NA	25	True	AATAAA	-29	NA	37196487	37204739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
WTC11_00050485	chr2	+	1252	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	0	-272	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	112.151683001193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCCATAAAATGAAATCC	37228302	True	NA	NA	False	NA	NA	NA	37231688	37253131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134_37248427_37253085
WTC11_00050491	chr2	+	1885	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	8	0	-5	multi-exon	FALSE	canonical	3	15	junction_1	5.10783711564885	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAACTAGCTTTCACT	37925027	True	NA	-4	True	AATAAA	-23	NA	37925286	38017736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
WTC11_00050492	chr2	+	582	7	FSM	ENSG00000115841.21	ENST00000425641.1	582	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	9.03081145609604	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTTACCATCAAACTA	NA	False	NA	-13	True	AATAAA	-14	NA	37989546	38017727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185_38017236_38017577
WTC11_00050495	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	9.2135166407235	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	38664613	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
WTC11_00050500	chr2	+	1120	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	13	-42	0	42	multi-exon	FALSE	canonical	3	49	junction_3	22.2311093340441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGAGTGGATCACCTG	39435636	True	NA	NA	False	NA	NA	NA	39437432	39475381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
WTC11_00050501	chr2	+	523	2	FSM	ENSG00000231312.8	ENST00000366187.2	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	39453838	39454726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39453932_39454296
WTC11_00050502	chr2	+	353	1	ISM	ENSG00000231312.8	ENST00000667600.1	3990	6	163921	1128	82509	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAACAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	39601147	39601500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_39601100_39601500
WTC11_00050504	chr2	+	1619	3	NIC	ENSG00000152154.11	novel	1664	4	NA	NA	-93	0	intron_retention	FALSE	canonical	3	44	junction_2	25	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	39665813	False	NA	19	True	ATTAAA	-19	NA	39665823	39717963	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_39666375_39704080_39704195_39717009
WTC11_00050518	chr2	+	2220	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	-349	331	0	0	multi-exon	FALSE	canonical	3	625	junction_11	251.982741026341	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42567735	True	NA	27	True	AATAAA	-19	NA	42568167	42709213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
WTC11_00050519	chr2	+	2041	14	FSM	ENSG00000057935.14	ENST00000406911.5	2041	14	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_11	253.395871031123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	42558615	True	NA	19	True	AATAAA	-20	NA	42568674	42709544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873
WTC11_00050520	chr2	+	706	4	FSM	ENSG00000057935.14	ENST00000433553.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_1	645.293903754113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGACTTGACCGATA	42569342	False	NA	NA	False	AAGAAA	-26	NA	42569383	42609488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42569897_42570436_42570505_42579106_42579201_42609457
WTC11_00050524	chr2	+	2504	3	FSM	ENSG00000057935.14	ENST00000482875.5	2504	3	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_2	132	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42702290	False	NA	27	True	AATAAA	-19	NA	42702306	42709213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42704319_42707902_42708055_42708873
WTC11_00050530	chr2	+	538	3	FSM	ENSG00000152527.14	ENST00000493408.2	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGACTTTGTTAAACCC	NA	False	NA	NA	False	AAGAAA	-8	NA	43740984	43744134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43741044_43742740_43742919_43743833
WTC11_00050532	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	15.3918719531518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	43773375	True	NA	1	True	AATAAA	-13	NA	43774081	43809997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
WTC11_00050535	chr2	+	3027	6	FSM	ENSG00000138032.21	ENST00000409432.7	3025	6	-2	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	335.025730355147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTACTTATTTT	44158381	True	NA	NA	False	AATAAA	-22	NA	44168874	44231471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44229992
WTC11_00050537	chr2	+	4768	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	-772	-119	136	119	multi-exon	TRUE	canonical	3	400	junction_5	177.078965436327	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGCTGAGAAATTATA	NA	False	NA	NA	False	NA	NA	NA	44168104	44234765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
WTC11_00050540	chr2	+	1122	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	-17	9	0	-9	multi-exon	FALSE	canonical	1	7	junction_3	117.465834276279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATACTTAAAAAATGGA	44358599	True	NA	NA	False	AATAAA	-24	NA	44361946	44457252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
WTC11_00050542	chr2	+	1574	11	FSM	ENSG00000143919.15	ENST00000378494.8	1512	11	-66	4	-66	-4	multi-exon	FALSE	canonical	3	171	junction_6	26.4839574082122	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTAATTGTATTAAATC	44361865	False	NA	28	True	AATAAA	-25	NA	44361880	44772588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
WTC11_00050546	chr2	+	2734	2	FSM	ENSG00000138083.5	ENST00000260653.5	2713	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	70	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGAGACTGGTGTTTT	44941567	False	NA	40	True	AATACA	-22	NA	44941680	44946071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44942911_44944567
WTC11_00050554	chr2	+	4744	2	FSM	ENSG00000171150.9	ENST00000394861.3	4766	2	0	22	0	-22	multi-exon	FALSE	canonical	3	89	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTCACCTTACAAAGAGA	46697839	True	NA	NA	False	ACTAAA	-35	NA	46699294	46763107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46699450_46758518
WTC11_00050557	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	144.984266387771	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	47345321	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
WTC11_00050559	chr2	+	752	6	FSM	ENSG00000119888.11	ENST00000490733.1	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	2030	junction_3	99.4726092952226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGATTACTTACCTA	47373763	False	NA	13	True	NA	NA	NA	47373774	47385210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165
WTC11_00050560	chr2	+	3639	16	FSM	ENSG00000095002.15	ENST00000406134.5	3628	16	-11	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	504.412221193033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGTTCCAAAGAAGCTCA	47378656	True	NA	NA	False	NA	NA	NA	47403118	47513234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47512302
WTC11_00050561	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_3	231.912301432148	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	47378693	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
WTC11_00050567	chr2	+	5295	6	NIC	ENSG00000170802.17	novel	5437	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	8.65794432876535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	48312226	True	NA	9	True	AATAAA	-19	NA	48314681	48379295	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_48314815_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
WTC11_00050568	chr2	+	5655	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	-219	1	-174	-1	multi-exon	FALSE	canonical	3	21	junction_1	22.3084438423362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTTTCTCTGATCT	48314412	False	NA	8	True	AATAAA	-18	NA	48314462	48379294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
WTC11_00050570	chr2	+	3193	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	15	0	15	0	multi-exon	FALSE	canonical	3	18	junction_2	27.5493373131652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	48437513	True	NA	26	True	AATAAA	-17	NA	48440783	48515385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
WTC11_00050580	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	129.508043508244	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	53779806	True	NA	27	True	AATAAA	-37	NA	53787079	53818819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
WTC11_00050586	chr2	+	9075	31	FSM	ENSG00000115306.16	ENST00000333896.5	9075	31	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	151.715629459269	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTGTTTTCTTGGTT	54548447	True	NA	5	True	ATTAAA	-20	NA	54558393	54662308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935
WTC11_00050591	chr2	+	591	5	FSM	ENSG00000143947.15	ENST00000478196.6	580	5	-11	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	3305.98491375868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTCAGGTCTTTACCT	55014725	True	NA	NA	False	TTTAAA	-8	NA	55232677	55235184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830
WTC11_00050592	chr2	+	795	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	-10	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	4356.5800072993	6368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	55014725	True	NA	10	True	AATATA	-2	NA	55232677	55235853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
WTC11_00050593	chr2	+	928	5	FSM	ENSG00000143947.15	ENST00000404735.1	796	5	-299	167	-53	0	multi-exon	FALSE	canonical	1	5833	junction_2	4696.32542526601	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	55232163	True	NA	7	True	NA	NA	NA	55232378	55235588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
WTC11_00050594	chr2	+	1305	4	FSM	ENSG00000143947.15	ENST00000495843.1	1159	4	0	-146	0	0	multi-exon	FALSE	canonical	1	5833	junction_2	5300.37552128778	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGCCAACCACTTGTA	55232777	False	NA	-88	True	NA	NA	NA	55232794	55235755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232873_55233362_55233418_55234118_55234963_55235427
WTC11_00050596	chr2	+	1131	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	1042	-19	1032	19	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATAAAAAGCATTGAAA	55283334	False	NA	23	True	AATAAA	-33	NA	55283360	55284491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55283400_55284500
WTC11_00050599	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.4100864762675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	55516935	True	NA	15	True	AATAAA	-21	NA	55519717	55545079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
WTC11_00050601	chr2	+	3228	3	NNC	ENSG00000028116.18	novel	1916	12	NA	NA	-56	-24262	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	94	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGAAAGATTTCCCTTA	58046573	False	NA	NA	False	AATAAA	-16	NA	58046585	58060665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_58046869_58048826_58048968_58057861
WTC11_00050603	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	25.844083784624	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043793	True	NA	8	True	AATAAA	-19	NA	58046805	58159871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
WTC11_00050609	chr2	+	1024	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	-10	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	61014032	True	NA	15	True	AATAAA	-29	NA	61017719	61019080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61017852_61018188
WTC11_00050618	chr2	+	746	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	-20	0	20	0	multi-exon	FALSE	canonical	2	5	junction_1	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144223	True	NA	-11	True	AATAAA	-2	NA	61145087	61164809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61145197_61163051_61163233_61164353
WTC11_00050622	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	73.3468472396735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	61174374	True	NA	8	True	AATAAA	-22	NA	61177528	61191203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
WTC11_00050623	chr2	+	2861	6	NIC	ENSG00000173209.23	novel	1509	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	39	junction_4	126.162752030859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61174259	True	NA	109	True	NA	NA	NA	61177413	61186912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186082_61186445_61186498_61186616
WTC11_00050627	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	49.3178466683208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61178657	False	NA	109	True	NA	NA	NA	61178667	61186912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
WTC11_00050631	chr2	+	569	4	ISM	ENSG00000173209.23	ENST00000642505.1	1509	8	7117	-138	-31	-5	3prime_fragment	FALSE	canonical	2	9	junction_1	179.081607716209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAATGTAAAGCATTGT	61185482	False	NA	104	True	TTTAAA	-43	NA	61185494	61186907	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_61185619_61185979_61186082_61186445_61186498_61186616
WTC11_00050636	chr2	+	5070	23	FSM	ENSG00000115504.15	ENST00000431489.6	5105	23	35	0	35	0	multi-exon	FALSE	canonical	2	8	junction_1	15.7383697056504	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	62704211	False	NA	13	True	AATAAA	-24	NA	62705747	63046487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
WTC11_00050637	chr2	+	5178	24	NIC	ENSG00000115504.15	novel	5165	25	NA	NA	35	0	intron_retention	FALSE	canonical	2	8	junction_1	13.429223557921	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	62704211	False	NA	13	True	AATAAA	-24	NA	62705747	63046487	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62987930_62988039_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
WTC11_00050639	chr2	+	886	4	FSM	ENSG00000115504.15	ENST00000469591.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	23.0120741254576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAGAGTCAATAAATGG	NA	False	NA	NA	False	NA	NA	NA	62942717	62956117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_62942897_62943801_62943851_62948259_62948317_62955516
WTC11_00050643	chr2	+	1301	9	FSM	ENSG00000014641.21	ENST00000233114.13	1296	9	-5	0	0	0	multi-exon	FALSE	canonical	3	4528	junction_4	239.80744228443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCAGACTCTGTTTCT	63563911	True	NA	16	True	AATAAA	-18	NA	63588957	63607197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
WTC11_00050644	chr2	+	1883	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	-543	103	-1	0	multi-exon	FALSE	canonical	2	44	junction_1	1580.43711813378	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	63588560	False	NA	-90	True	NA	NA	NA	63588607	63607091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
WTC11_00050645	chr2	+	2074	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	-17	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1328.40882637839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	63840939	False	NA	-95	True	NA	NA	NA	63840951	63891451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
WTC11_00050646	chr2	+	2122	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	-17	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_1	746.636077415742	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63840939	False	NA	14	True	AATAAA	-13	NA	63840951	63891560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
WTC11_00050648	chr2	+	4397	7	FSM	ENSG00000169764.16	ENST00000475550.5	4397	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1292.8346117479	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTACACTGGTACTTT	63840296	False	NA	16	True	AATAAA	-15	NA	63841850	63891562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63842205_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63890186_63891119
WTC11_00050649	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	594.395512004724	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63798289	True	NA	14	True	AATAAA	-13	NA	63841895	63891560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
WTC11_00050659	chr2	+	2237	4	ISM	ENSG00000011523.14	ENST00000377990.7	5803	7	15	12514	15	6	5prime_fragment	FALSE	canonical	3	80	junction_1	12.2836838484589	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTATGTTATAGCTC	65053802	True	NA	15	True	AGTAAA	-16	NA	65056430	65074490	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281
WTC11_00050660	chr2	+	1856	5	NIC	ENSG00000011523.14	novel	5803	7	NA	NA	16	-7	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	42.7339151026442	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATAACCAATGTCTGG	65053852	True	NA	2	True	AGTAAA	-3	NA	65056480	65074477	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_65056525_65069398_65069802_65071453_65072570_65072883_65072981_65074281
WTC11_00050665	chr2	+	1085	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-65	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	638	junction_2	634	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	67324088	True	NA	18	True	AATAAA	-18	NA	67331815	67339973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67339333
WTC11_00050666	chr2	+	2906	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-68	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	701	junction_2	602.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	67324085	True	NA	18	True	AATAAA	-18	NA	67331812	67339973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337515
WTC11_00050667	chr2	+	1280	4	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-78	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	742.051360905849	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	67324075	True	NA	18	True	AATAAA	-18	NA	67331802	67339973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337515_67337698_67339333
WTC11_00050668	chr2	+	883	3	FSM	ENSG00000289533.1	ENST00000693757.1	821	3	-64	2	-64	-2	multi-exon	FALSE	canonical	3	61	junction_2	922.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACGTTTATGGTGATTT	67324089	True	NA	14	True	AATAAA	-17	NA	67331816	67346626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_67332063_67333952_67334151_67346187
WTC11_00050669	chr2	+	2218	4	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-56	-6202	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	845.525609047742	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCAGTCCTGCTTCTAC	67324097	True	NA	-5	True	AATAAA	-8	NA	67331824	67340426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337008_67337698_67339333
WTC11_00050671	chr2	+	5833	5	ISM	ENSG00000143971.9	ENST00000272342.6	4948	6	696	-84	693	84	3prime_fragment	FALSE	canonical	3	174	junction_2	13.0072095393286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATAGTTTTCTCTAAG	67397950	False	NA	NA	False	NA	NA	NA	67398028	67412173	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
WTC11_00050677	chr2	+	2221	13	FSM	ENSG00000169604.21	ENST00000409829.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	23.1264639176276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTTGATACTTAGGC	69006962	True	NA	1	True	AATAAA	-12	NA	69013305	69146401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145325
WTC11_00050678	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	8.09663853432741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	69007013	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
WTC11_00050680	chr2	+	2873	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	-1459	0	128	multi-exon	FALSE	canonical	3	15	junction_5	22.1001508290479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATATTTAGTCACTCC	69741916	True	NA	NA	False	TATAAA	-29	NA	69741973	69827240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
WTC11_00050681	chr2	+	2652	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	-1	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	10.9807280673409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	69741876	True	NA	NA	False	ATTAAA	-35	NA	69742132	69827112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
WTC11_00050685	chr2	+	1351	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	-12	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_4	188.077610310212	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	69880523	True	NA	6	True	ATTAAA	-15	NA	69893946	69905218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
WTC11_00050690	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	22.0581050863396	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	70250803	True	NA	16	True	AATAAA	-15	NA	70258136	70281185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
WTC11_00050693	chr2	+	2874	8	FSM	ENSG00000124357.13	ENST00000472519.5	2857	8	-17	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.5463430298319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTTATCCACTCCCCA	71066590	True	NA	-7	True	AATAAA	-1	NA	71068647	71078620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71073595_71075554_71076702_71077557_71077637_71078317
WTC11_00050694	chr2	+	2282	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	89	0	-86	multi-exon	FALSE	canonical	3	204	junction_1	21.5910360915398	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGCCGAGGTCGCA	71066590	True	NA	NA	False	NA	NA	NA	71068647	71079719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
WTC11_00050708	chr2	+	6839	28	FSM	ENSG00000075292.19	ENST00000409544.5	6821	28	-18	0	-14	0	multi-exon	TRUE	canonical	3	9	junction_1	117.541482039321	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTGGCTGATTT	71320279	True	NA	NA	False	AATAAA	-28	NA	71331745	71435061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71331866_71348426_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00050713	chr2	+	3133	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1184	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	176.332073089384	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71416886	True	NA	NA	False	AATAAA	-25	NA	71417037	71435058	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00050714	chr2	+	3905	7	ISM	ENSG00000075292.19	ENST00000409407.4	4470	9	14549	12	3566	-4	3prime_fragment	FALSE	canonical	3	471	junction_1	58.0421302924771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATACCATCTGTGT	71421636	False	NA	NA	False	AATAAA	-15	NA	71421787	71435048	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00050715	chr2	+	2786	6	NIC	ENSG00000075292.19	novel	4233	18	NA	NA	-4034	0	combination_of_known_junctions	FALSE	canonical	1	12	junction_3	223.897297884543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71422660	False	NA	NA	False	AATAAA	-25	NA	71422811	71435058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71424039_71424649_71424716_71426459_71427415_71431326_71431429_71433164_71433284_71434741
WTC11_00050718	chr2	+	7066	56	FSM	ENSG00000135636.15	ENST00000409582.7	6790	56	-161	-115	0	0	multi-exon	FALSE	canonical	2	9	junction_6	15.395974573175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTCAGTGTGTGTA	NA	False	NA	10	True	TATAAA	-16	NA	71453560	71686763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
WTC11_00050721	chr2	+	6769	56	FSM	ENSG00000135636.15	ENST00000413539.6	6769	56	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	15.1366666636334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	71453685	False	NA	NA	False	NA	NA	NA	71453721	71686648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71549349_71549392_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
WTC11_00050723	chr2	+	1432	3	FSM	ENSG00000116096.6	ENST00000234454.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	72886962	True	NA	4	True	AATAAA	-18	NA	72887407	72892158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_72887737_72888313_72888605_72891346
WTC11_00050728	chr2	+	2577	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	-23	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	15.3920975395385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210252	True	NA	13	True	AATAAA	-14	NA	73214221	73227221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
WTC11_00050729	chr2	+	2519	13	NNC	ENSG00000135632.12	novel	2554	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_4	91.6543552338531	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210288	True	NA	13	True	AATAAA	-14	NA	73214257	73227221	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73214363_73218860_73218970_73220069_73220191_73220660_73220783_73221167_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
WTC11_00050730	chr2	+	1018	5	FSM	ENSG00000135624.17	ENST00000461290.5	1018	5	0	0	0	0	multi-exon	FALSE	canonical	3	3375	junction_1	239.55531720252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGCAGATTCTGCC	73181789	True	NA	NA	False	NA	NA	NA	73234268	73244511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996
WTC11_00050731	chr2	+	1892	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	-46	1	-7	0	multi-exon	FALSE	canonical	3	3375	junction_1	269.770609626367	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	73181782	True	NA	24	True	AATAAA	-13	NA	73234261	73253004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
WTC11_00050732	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1402.03806761998	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
WTC11_00050734	chr2	+	1916	13	NNC	ENSG00000135624.17	novel	2031	13	NA	NA	-7	48665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1057.41940853928	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCGAGGTTAGAAACAATAT	73181782	True	NA	NA	False	NA	NA	NA	73234261	73301686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639_73253001_73301658
WTC11_00050740	chr2	+	5691	8	ISM	ENSG00000116127.20	ENST00000651057.1	2749	12	49042	-216	-3492	0	3prime_fragment	FALSE	canonical	3	23	junction_2	7.4258236676383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTAAACAATTCTTT	NA	False	NA	56	True	AATAAA	-14	NA	73568997	73609916	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
WTC11_00050746	chr2	+	8220	9	FSM	ENSG00000124356.17	ENST00000684774.1	8197	9	-23	0	-8	0	multi-exon	FALSE	canonical	3	19	junction_2	107.481321051613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823214	True	NA	-1	True	AATAAA	-16	NA	73828952	73867152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00050747	chr2	+	6754	10	FSM	ENSG00000124356.17	ENST00000394070.7	6746	10	-8	0	-8	0	multi-exon	FALSE	canonical	3	234	junction_1	36.1942632382264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTAAGGCTTTGCTT	73823214	True	NA	15	True	AATAAA	-32	NA	73828952	73867168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00050748	chr2	+	6381	11	FSM	ENSG00000124356.17	ENST00000394073.6	6370	11	-11	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	58.881660982007	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823237	True	NA	-1	True	AATAAA	-16	NA	73828975	73867152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00050750	chr2	+	6280	12	FSM	ENSG00000124356.17	ENST00000682848.1	6280	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	99.6770819253705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73847662_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00050751	chr2	+	8049	9	FSM	ENSG00000124356.17	ENST00000683818.1	8034	9	-15	0	0	0	multi-exon	FALSE	canonical	3	324	junction_7	12.8743931895837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823237	True	NA	-1	True	AATAAA	-16	NA	73828975	73867152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00050755	chr2	+	891	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	418	junction_1	764.465622183235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	73906347	True	NA	30	True	AATAAA	-30	NA	73926814	73958961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
WTC11_00050757	chr2	+	726	4	NNC	ENSG00000114956.20	novel	703	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_2	926.975847701666	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906366	True	NA	15	True	AATAAA	-15	NA	73926833	73958946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73927053_73946718_73946889_73958145_73958246_73958709
WTC11_00050761	chr2	+	704	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1177	junction_2	455.63460018845	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTTCTAATTCAGT	73906407	True	NA	16	True	AATAAA	-16	NA	73926874	73958947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
WTC11_00050762	chr2	+	1081	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	-5	-1	0	1	multi-exon	FALSE	canonical	3	418	junction_1	649.605371659509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTTCTAATTCAGT	73906407	True	NA	16	True	AATAAA	-16	NA	73926874	73958947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
WTC11_00050764	chr2	+	515	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	302	junction_1	995.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTTCTAATTCAGT	73906408	True	NA	16	True	AATAAA	-16	NA	73926875	73958947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_73927053_73958145_73958246_73958709
WTC11_00050770	chr2	+	3134	2	FSM	ENSG00000225439.4	ENST00000655044.1	2799	2	108	-443	36	443	multi-exon	FALSE	canonical	3	69	junction_1	0	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAAATATTTCTGGCA	74146573	True	NA	NA	False	NA	NA	NA	74148114	74151467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74148479_74148697
WTC11_00050772	chr2	+	4333	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	-38	-2899	-35	75	multi-exon	FALSE	canonical	3	155	junction_1	377.967995411722	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTTCAAATTTCAC	74181773	True	NA	21	True	TTTAAA	-18	NA	74198574	74217640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
WTC11_00050775	chr2	+	4405	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	-2	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	120.173514009484	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	74181811	True	NA	23	True	AATAAA	-27	NA	74198612	74217565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
WTC11_00050776	chr2	+	4035	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	-2	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	465.960341660103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	74181811	True	NA	-39	True	NA	NA	NA	74198612	74217503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
WTC11_00050778	chr2	+	2449	4	FSM	ENSG00000065911.13	ENST00000677299.1	2438	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	1112	junction_3	79.0667790892961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGTCTGGTATGGTAT	74208897	False	NA	11	True	AATAAA	-3	NA	74209007	74215266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74210050_74211198_74211292_74211740_74211867_74214078
WTC11_00050782	chr2	+	866	9	FSM	ENSG00000005448.17	ENST00000409791.5	854	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	44	junction_8	287.255113096356	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTCTGATTACTCA	74412711	True	NA	27	True	CATAAA	-16	NA	74421716	74425754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425639
WTC11_00050784	chr2	+	1139	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	-39	-54	-9	0	multi-exon	FALSE	canonical	3	32	junction_1	217.941265165017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	74412714	True	NA	-23	True	NA	NA	NA	74421719	74425704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
WTC11_00050785	chr2	+	864	8	FSM	ENSG00000005448.17	ENST00000469321.5	864	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	241.460437457449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	74413169	False	NA	-23	True	NA	NA	NA	74422174	74425704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425096_74425238_74425416_74425492_74425569
WTC11_00050786	chr2	+	626	3	FSM	ENSG00000005448.17	ENST00000482605.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74415867	False	NA	28	True	CATAAA	-17	NA	74424872	74425755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74425238_74425416_74425492_74425569
WTC11_00050792	chr2	+	1502	5	FSM	ENSG00000239779.7	ENST00000464774.6	597	5	-254	-651	-204	0	multi-exon	FALSE	canonical	3	6	junction_1	295.323974644796	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	74458185	False	NA	14	True	ATTAAA	-14	NA	74458195	74460881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74458672_74459477_74459563_74459642_74459746_74459872_74460050_74460220
WTC11_00050793	chr2	+	1325	5	FSM	ENSG00000239779.7	ENST00000393972.7	1325	5	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	284.913144659912	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTGGACTAAAGCT	74458337	False	NA	24	True	ATTAAA	-24	NA	74458399	74460891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74458672_74458996_74459099_74459642_74459746_74459872_74460050_74460220
WTC11_00050794	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	64.9153294684699	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	74451488	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
WTC11_00050796	chr2	+	863	3	FSM	ENSG00000239779.7	ENST00000473467.5	847	3	-16	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	57	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCCGGGGCAGGGGT	74451522	True	NA	NA	False	NA	NA	NA	74458471	74460432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74458672_74459642_74459746_74459872
WTC11_00050798	chr2	+	1071	5	FSM	ENSG00000239779.7	ENST00000494741.5	1069	5	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	295.575180791622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGTTACTTGCCCAC	74451522	True	NA	NA	False	GGGGCT	-44	NA	74458471	74460696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74458672_74459437_74459553_74459642_74459746_74459872_74460050_74460220
WTC11_00050802	chr2	+	1576	12	FSM	ENSG00000115282.21	ENST00000464241.5	1562	12	-14	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	45.1850190927615	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACCGAAGCCACCCCAA	74479996	True	NA	NA	False	NA	NA	NA	74483072	74493083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74491943_74492056_74492138_74492446_74492645_74492748_74492921
WTC11_00050803	chr2	+	3375	10	FSM	ENSG00000115282.21	ENST00000410003.5	3358	10	-17	0	-3	0	multi-exon	FALSE	canonical	3	83	junction_8	29.3160723625357	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74479993	True	NA	29	True	AATAAA	-18	NA	74483069	74494559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138
WTC11_00050808	chr2	+	2907	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_8	25.6616607672484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480007	True	NA	29	True	AATAAA	-18	NA	74483083	74494559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
WTC11_00050813	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	8.54280936441489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	74529208	True	NA	3	True	ATTAAA	-19	NA	74529932	74533319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
WTC11_00050814	chr2	+	1347	7	NIC	ENSG00000115317.12	novel	1785	8	NA	NA	25	-150	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	55.3516535936873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCCTGCTCTGATTT	74529233	True	NA	8	True	AATAGA	-13	NA	74529957	74533002	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532819
WTC11_00050815	chr2	+	2367	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	-645	0	-74	0	multi-exon	FALSE	canonical	3	22	junction_3	31.7525152109596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74554043	True	NA	24	True	ATTAAA	-20	NA	74554085	74557551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
WTC11_00050819	chr2	+	1918	5	FSM	ENSG00000115325.14	ENST00000233668.10	1918	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	8.74642784226795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553741	True	NA	24	True	ATTAAA	-20	NA	74554719	74557551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74555893_74556079_74556307
WTC11_00050821	chr2	+	1419	5	NIC	ENSG00000115325.14	novel	1918	5	NA	NA	13	-64	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	32.5768322585239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGGGCTCTCTAGAG	74553784	False	NA	NA	False	NA	NA	NA	74554762	74557050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74554860_74555153_74555454_74555574_74555669_74555893_74556079_74556307
WTC11_00050830	chr2	+	2390	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	-148	-1166	-128	1112	multi-exon	FALSE	canonical	2	7	junction_6	239.252597803149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCATTTTTGCAGT	75646639	False	NA	9	True	AGTAAA	-19	NA	75646654	75671919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
WTC11_00050831	chr2	+	7832	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	-5	-2	-5	2	multi-exon	FALSE	canonical	3	580	junction_2	44.6434765671313	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGATTTGATTTGCTA	75635516	True	NA	9	True	AATAAA	-22	NA	75646777	75662208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
WTC11_00050835	chr2	+	1747	1	FSM	ENSG00000270696.1	ENST00000604845.1	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGATTTGATTTGCTA	75660446	False	NA	9	True	AATAAA	-22	NA	75660461	75662208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75660500_75662200
WTC11_00050840	chr2	+	6655	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	98	junction_2	29	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTTTTGTGAGTGTG	77088184	True	NA	16	True	AATAAA	-28	NA	77088569	77099890	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090901_77093656
WTC11_00050843	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	14371	junction_2	222.5	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	84763150	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_84905719_84906002_84906118_84906388
WTC11_00050847	chr2	+	625	5	FSM	ENSG00000176407.18	ENST00000453448.1	625	5	0	0	0	0	multi-exon	FALSE	non_canonical	2	28	junction_1	254.562860606177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAGTTTCACATTAA	84972189	False	NA	NA	False	NA	NA	NA	84972200	85046278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_84972241_85027888_85028057_85035015_85035156_85043563_85043666_85046103
WTC11_00050849	chr2	+	715	2	FSM	ENSG00000152284.5	ENST00000490744.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGTCTTAGCAACCA	85303356	False	NA	NA	False	GGGGCT	-12	NA	85303392	85304364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85303998_85304254
WTC11_00050852	chr2	+	2387	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	-23	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.8356948306423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354290	True	NA	5	True	AATAAA	-14	NA	85354745	85391748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
WTC11_00050854	chr2	+	2343	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	-11	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.6936507641996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354290	True	NA	5	True	AATAAA	-14	NA	85354745	85391748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
WTC11_00050867	chr2	+	546	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	-11	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	786.163787006245	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582296	True	NA	-17	True	ATTAAA	-39	NA	85595744	85597604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
WTC11_00050868	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	908.18732771506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	85582368	False	NA	-8	True	NA	NA	NA	85595816	85597613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
WTC11_00050869	chr2	+	634	5	FSM	ENSG00000168883.20	ENST00000491659.5	648	5	14	0	14	0	multi-exon	FALSE	canonical	2	4	junction_1	288.872268485571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTCTAAGAGGGTTG	85602715	True	NA	NA	False	NA	NA	NA	85602869	85623782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85603082_85619219_85619290_85621206_85621327_85621484_85621580_85623645
WTC11_00050870	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	260.95320727841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85602701	True	NA	22	True	ATTAAA	-19	NA	85602855	85649280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
WTC11_00050871	chr2	+	2098	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	-91	27	-65	0	multi-exon	FALSE	canonical	3	155	junction_13	153.714790070411	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAAATAGTCTCCTGT	85615941	False	NA	-5	True	NA	NA	NA	85616077	85649253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
WTC11_00050872	chr2	+	647	4	FSM	ENSG00000168883.20	ENST00000455732.5	623	4	-24	0	-15	0	multi-exon	FALSE	canonical	3	21	junction_3	328.86201091373	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGTGTGTCTAAGAGG	85603750	True	NA	NA	False	NA	NA	NA	85616127	85623778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616457_85619219_85619290_85621484_85621580_85623625
WTC11_00050873	chr2	+	1946	13	FSM	ENSG00000168883.20	ENST00000409025.5	1946	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_11	225.874534986916	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAAATAGTCTCCTGT	85603765	True	NA	-5	True	NA	NA	NA	85616142	85649253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85648760_85648854_85649016
WTC11_00050875	chr2	+	2200	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	-17	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	62.185877282011	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	85603791	True	NA	25	True	ATTAAA	-22	NA	85616168	85649283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
WTC11_00050891	chr2	+	798	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	-95	-52	13	0	multi-exon	FALSE	canonical	3	70	junction_4	115.648983998996	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	86199337	False	NA	15	True	AATAAA	-15	NA	86199367	86213790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
WTC11_00050893	chr2	+	4667	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_7	24.2289083534525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	86438345	True	NA	14	True	ATTAAA	-15	NA	86441370	86492716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
WTC11_00050894	chr2	+	4621	26	FSM	ENSG00000115548.17	ENST00000409064.5	4621	26	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	37.3360094278968	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	86438435	True	NA	14	True	ATTAAA	-15	NA	86441460	86492716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86441489_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
WTC11_00050895	chr2	+	567	4	FSM	ENSG00000115548.17	ENST00000427678.1	565	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	125	junction_2	18.8030730348939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGATTGTGAAGCATT	86438967	False	NA	NA	False	AGTAAA	-9	NA	86441992	86455143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86442234_86449806_86449963_86451102_86451214_86455084
WTC11_00050897	chr2	+	966	6	FSM	ENSG00000115548.17	ENST00000488971.1	975	6	9	0	9	0	multi-exon	FALSE	canonical	2	7	junction_3	58.2662852771652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGATAATGAAAGCTGTT	NA	False	NA	NA	False	AGTAAA	-1	NA	86456441	86466833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86456567_86456804_86456878_86456982_86457072_86460778_86460832_86464052_86464217_86466371
WTC11_00050899	chr2	+	433	3	ISM	ENSG00000233673.7	ENST00000616781.4	1771	15	64	21694	64	-21694	5prime_fragment	FALSE	canonical	2	2	junction_1	47	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGATTTGAATTTTA	86861870	False	NA	NA	False	TATAAA	-31	NA	86861888	86873348	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_86861923_86871306_86871544_86873186
WTC11_00050901	chr2	+	671	4	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	24637	34941	24637	-34941	internal_fragment	FALSE	canonical	3	125	junction_1	173.937408921204	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAGGCGCTTTCAAACAGG	NA	False	NA	NA	False	NA	NA	NA	87149834	87161688	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87150107_87156279_87156515_87159562_87159655_87161616
WTC11_00050911	chr2	+	10136	5	FSM	ENSG00000233757.6	ENST00000425953.5	1850	5	72	-8358	72	8358	multi-exon	FALSE	canonical	2	3	junction_4	4.32290411644765	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAATGAGCTCAGTGC	95205344	True	NA	NA	False	NA	NA	NA	95207606	95223961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_95207835_95208647_95208737_95211617_95211721_95212192_95212283_95214335
WTC11_00050914	chr2	+	1368	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	-2	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	121.268039895102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397391	True	NA	-24	True	NA	NA	NA	95402720	95413096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
WTC11_00050915	chr2	+	1410	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	0	50	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	131.709327455482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTCTTTTGGGCTTT	95397393	True	NA	26	True	AATAAA	-36	NA	95402722	95413146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
WTC11_00050925	chr2	+	3975	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	632	junction_5	45.7726871495315	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	96257735	True	NA	56	True	AATAAA	-30	NA	96266217	96274173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
WTC11_00050927	chr2	+	4123	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	-26	-2150	-12	-14	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATACATTGGAATCTATG	96324372	True	NA	2	True	AATAAA	-14	NA	96325304	96330503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96325566_96326641
WTC11_00050928	chr2	+	4304	1	FSM	ENSG00000198885.10	ENST00000361124.5	4295	1	-23	14	-4	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATACATTGGAATCTATG	96326180	False	NA	2	True	AATAAA	-14	NA	96326199	96330503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96326200_96330500
WTC11_00050930	chr2	+	2819	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	14	112	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	38.4798513762426	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGTATAAGGCAGAAG	96331735	True	NA	99	True	NA	NA	NA	96335779	96373927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
WTC11_00050938	chr2	+	2047	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	-9	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.7893586904929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536044	True	NA	15	True	AATAAA	-17	NA	96536742	96552630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
WTC11_00050942	chr2	+	5221	7	NIC	ENSG00000168763.16	novel	4900	8	NA	NA	0	471	intron_retention	FALSE	canonical	3	17	junction_2	96.1919377541012	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTTCAGCCGTTCTGA	96815669	True	NA	NA	False	NA	NA	NA	96816267	96835853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96817503_96825057_96825202_96827730_96827901_96828098_96828196_96828566_96828701_96828995_96829135_96832551
WTC11_00050949	chr2	+	1022	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	-217	-192	-182	0	multi-exon	FALSE	canonical	3	13	junction_1	3461.87004197154	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	NA	False	NA	NA	False	AATAGA	-42	NA	97645879	97648383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
WTC11_00050951	chr2	+	4007	1	FSM	ENSG00000235734.4	ENST00000446623.2	298	1	-3221	-488	-3221	488	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGTAGTCCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	97824026	97828033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97824000_97828000
WTC11_00050954	chr2	+	10096	25	FSM	ENSG00000040933.16	ENST00000409851.8	10096	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_16	26.5513130037334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTACTGAGAATGATGAT	98441114	True	NA	NA	False	ATTAAA	-14	NA	98444857	98594392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
WTC11_00050955	chr2	+	464	4	FSM	ENSG00000040933.16	ENST00000498026.1	499	4	35	0	35	0	multi-exon	FALSE	canonical	2	2	junction_1	68.762069647606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGAAGGGACTTACGGA	98571914	False	NA	NA	False	NA	NA	NA	98571931	98587573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98572030_98572814_98572928_98576988_98577144_98587475
WTC11_00050957	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	44.8274469493858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599504	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
WTC11_00050965	chr2	+	1393	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	30	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGTCTCTTTTAGTAAC	99154097	True	NA	39	True	AATAAA	-36	NA	99154984	99163156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99155052_99156300_99156427_99161956
WTC11_00050972	chr2	+	726	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	-10	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2155.28064684548	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	100847299	True	NA	26	True	AATAAA	-14	NA	101002282	101006418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
WTC11_00050974	chr2	+	1683	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	-10	-848	0	0	multi-exon	FALSE	canonical	3	9528	junction_3	3218.76687913589	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	100847299	True	NA	13	True	ATTAAA	-16	NA	101002282	101007267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
WTC11_00050975	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	6652.01046207085	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	100847299	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
WTC11_00050981	chr2	+	7640	31	FSM	ENSG00000071054.17	ENST00000350878.9	7600	31	-41	1	-4	-1	multi-exon	FALSE	canonical	3	32	junction_15	70.7255179471235	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGCATGAGTTT	101689991	True	NA	33	True	AATAAA	-16	NA	101697702	101894689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050982	chr2	+	6441	30	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	-1	-1164	combination_of_known_junctions	FALSE	canonical	2	15	junction_15	64.4066303334958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTCGTGTACATATCA	101689994	True	NA	NA	False	NA	NA	NA	101697705	101893523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101863820_101864052_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050984	chr2	+	4645	30	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	61.9468146703302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	101697726	False	NA	NA	False	NA	NA	NA	101697743	101891987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101868028_101868038_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050986	chr2	+	6958	29	FSM	ENSG00000071054.17	ENST00000413150.6	6958	29	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_16	55.2380285303374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGGCATGAGT	101698014	False	NA	31	True	AATAAA	-14	NA	101698025	101894687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050988	chr2	+	4251	29	FSM	ENSG00000071054.17	ENST00000417294.5	4251	29	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	67.3591027589427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	101698486	False	NA	NA	False	NA	NA	NA	101698529	101891987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050993	chr2	+	5765	17	ISM	ENSG00000071054.17	ENST00000456652.5	3855	25	157896	-2702	0	-1	3prime_fragment	FALSE	canonical	3	61	junction_4	69.8824627052453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGCATGAGTTT	NA	False	NA	33	True	AATAAA	-16	NA	101855976	101894689	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00050994	chr2	+	2644	18	NIC	ENSG00000071054.17	novel	7600	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	79.973871165551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	NA	False	NA	25	True	AATAAA	-38	NA	101855976	101891496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00051000	chr2	+	846	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	8	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	103.454096100638	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	105333714	True	NA	75	True	TTTAAA	-43	NA	105337539	105345596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
WTC11_00051002	chr2	+	923	6	NNC	ENSG00000135974.10	novel	854	5	NA	NA	39	362	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_5	122.189361239021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	105333753	True	NA	NA	False	AATAAA	-16	NA	105337578	105349573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314_105345390_105349250
WTC11_00051008	chr2	+	417	3	ISM	ENSG00000235486.1	ENST00000447760.1	831	6	75	5889	75	-5889	5prime_fragment	FALSE	canonical	3	88	junction_1	18	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTTCTTGCACCAGAA	NA	False	NA	NA	False	NA	NA	NA	106369798	106372358	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_106369870_106370938_106371160_106372233
WTC11_00051015	chr2	+	7104	23	NIC	ENSG00000135968.22	novel	6909	23	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	35.7146635163016	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTATGGCTGCTCTT	108448985	False	NA	2	True	ATTAAA	-14	NA	108449001	108509397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534_108475636_108475751_108475851_108481696_108481817_108482286_108482452_108483061_108483167_108484148_108484312_108485635_108485737_108485830_108485909_108486510_108486649_108487698_108487821_108489837_108490015_108492572_108492791_108495290_108495486_108496969_108497110_108499552_108499755_108507559
WTC11_00051023	chr2	+	2267	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	-17	0	-17	0	multi-exon	FALSE	canonical	3	46	junction_13	34.0013922443804	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781479	True	NA	NA	False	AATAAA	-20	NA	108786739	108876578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
WTC11_00051025	chr2	+	2394	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	-19	0	-5	0	multi-exon	FALSE	canonical	3	107	junction_13	21.3388598283861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781491	True	NA	NA	False	AATAAA	-20	NA	108786751	108876578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
WTC11_00051026	chr2	+	2295	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	44.5055677655075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTAAATAATACTG	108781530	True	NA	NA	False	AATAAA	-18	NA	108786790	108876576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
WTC11_00051031	chr2	+	7367	23	FSM	ENSG00000015568.13	ENST00000016946.8	7268	23	-109	10	-78	0	multi-exon	FALSE	canonical	3	89	junction_1	37.442297202959	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACCCACTGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	109794195	109857695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
WTC11_00051046	chr2	+	2329	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	-97	-44	-2	44	multi-exon	TRUE	canonical	3	10	junction_10	28.8138855415232	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATTTGTTTTCTTTCT	110730471	True	NA	NA	False	GATAAA	-26	NA	110732536	110888061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
WTC11_00051050	chr2	+	1544	5	FSM	ENSG00000153094.24	ENST00000308659.12	1522	5	-22	0	-22	0	multi-exon	FALSE	canonical	3	26	junction_2	3.83242742918897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAGTTAATATCTGCC	111120587	True	NA	NA	False	GATAAA	-16	NA	111120891	111165048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111121189_111123732_111123870_111124049_111124140_111150043_111150148_111164132
WTC11_00051052	chr2	+	5245	5	FSM	ENSG00000153094.24	ENST00000621302.4	5224	5	-22	1	-22	0	multi-exon	FALSE	canonical	3	11	junction_3	10.0840220150494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGAGCGTTTGATTTG	111120587	True	NA	13	True	AATAAA	-14	NA	111120891	111168444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111121189_111123732_111124140_111150043_111150148_111153779_111153905_111164132
WTC11_00051059	chr2	+	5545	8	ISM	ENSG00000153214.11	ENST00000283206.9	5162	19	39965	0	45	0	3prime_fragment	FALSE	canonical	3	47	junction_4	6.71276578541185	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGATTCTTGATAGTAT	NA	False	NA	13	True	AATAAA	-18	NA	112095233	112119314	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_112097153_112097232_112097292_112098594_112098699_112100621_112100696_112106001_112106076_112107787_112107841_112112898_112112930_112116083
WTC11_00051071	chr2	+	447	3	FSM	ENSG00000125611.16	ENST00000489052.5	554	3	107	0	107	0	multi-exon	FALSE	canonical	2	7	junction_1	306	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGGGCTCACCTCAG	112584333	False	NA	NA	False	NA	NA	NA	112584346	112586365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112584487_112585973_112586115_112586199
WTC11_00051072	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	508	junction_1	52.8036194045657	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584427	False	NA	29	True	AATAAA	-21	NA	112584440	112589040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
WTC11_00051079	chr2	+	3202	3	FSM	ENSG00000144136.11	ENST00000490674.1	3202	3	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_2	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112658318	False	NA	20	True	AATAAA	-23	NA	112658362	112663825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112659763_112660386_112661227_112662863
WTC11_00051084	chr2	+	3212	1	FSM	ENSG00000189223.15	ENST00000613966.1	3231	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTTCCCTGTCCTT	113237031	False	NA	2	True	AATAAA	-18	NA	113237613	113240825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113237600_113240800
WTC11_00051087	chr2	+	1675	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	-10	0	-10	0	multi-exon	FALSE	canonical	3	70	junction_9	540.988783530052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437752	113496171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
WTC11_00051088	chr2	+	1764	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	-24	0	4	0	multi-exon	FALSE	canonical	3	198	junction_1	530.580462009926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113437766	113496119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
WTC11_00051090	chr2	+	902	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	-22	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	113431826	True	NA	NA	False	TATAAA	-26	NA	113437816	113444375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113441350_113441438_113443766
WTC11_00051091	chr2	+	1761	16	FSM	ENSG00000136682.16	ENST00000456188.5	1436	16	-5	-320	0	0	multi-exon	FALSE	canonical	3	18	junction_7	575.395454351952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	113431826	True	NA	NA	False	ATTAAA	-13	NA	113437816	113496119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113457064_113457210_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
WTC11_00051093	chr2	+	3305	6	FSM	ENSG00000136682.16	ENST00000479583.5	3305	6	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_5	291.930402664745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113468584	113496119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
WTC11_00051097	chr2	+	565	6	FSM	ENSG00000144134.19	ENST00000413545.5	556	6	-9	0	-5	0	multi-exon	FALSE	canonical	3	27	junction_5	58.7605309710523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATACAGAGCTTCGGGA	113626836	True	NA	NA	False	NA	NA	NA	113627234	113640938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893
WTC11_00051105	chr2	+	771	3	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	117277258	True	NA	25	True	GATAAA	-22	NA	117279119	117284473	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117281200_117281285_117284018
WTC11_00051112	chr2	+	3250	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	-28	-2648	-28	23	multi-exon	FALSE	canonical	3	36	junction_1	127.303525088664	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATTCTGTGTAAGGT	NA	False	NA	25	True	AATAAA	-40	NA	118088423	118111020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
WTC11_00051120	chr2	+	586	5	NNC	ENSG00000155368.18	novel	564	4	NA	NA	0	53272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2399.02490608164	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCAACACTTTGTG	119341038	True	NA	NA	False	TTTAAA	-23	NA	119366976	119425822	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244_119372537_119425793
WTC11_00051124	chr2	+	1749	2	FSM	ENSG00000144120.13	ENST00000424086.5	1738	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	50	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673303	True	NA	16	True	AATAAA	-16	NA	119679155	119682118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119679618_119680831
WTC11_00051125	chr2	+	1373	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	-10	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673338	True	NA	16	True	AATAAA	-16	NA	119679190	119682118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119679277_119680831
WTC11_00051128	chr2	+	10687	14	ISM	ENSG00000088179.9	ENST00000430976.5	4154	20	48959	-7623	-818	185	3prime_fragment	FALSE	canonical	3	97	junction_3	11.9842105194772	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTAAATAGTGTCTGA	NA	False	NA	NA	False	ACTAAA	-10	NA	119931461	119985084	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
WTC11_00051131	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_16	25.7727448091972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	120009856	True	NA	NA	False	NA	NA	NA	120013118	120104399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
WTC11_00051133	chr2	+	6410	24	FSM	ENSG00000115109.14	ENST00000452780.1	6410	24	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_22	100.392048126493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGTGCACTGTTTC	120019068	False	NA	7	True	AATAAA	-17	NA	120019084	120179118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167879_120168008_120174840
WTC11_00051149	chr2	+	1185	2	FSM	ENSG00000236859.8	ENST00000668016.1	1168	2	-17	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	NA	False	NA	20	True	ACTAAA	-20	NA	121649620	121651536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121649737_121650467
WTC11_00051150	chr2	+	3262	2	FSM	ENSG00000236859.8	ENST00000669018.1	3238	2	-24	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATTAATAAGACATACC	121649559	True	NA	NA	False	TATAAA	-33	NA	121649658	121653006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121650382_121650467
WTC11_00051152	chr2	+	3323	5	FSM	ENSG00000211460.12	ENST00000536142.5	3328	5	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	482.93963132052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121755462	True	NA	NA	False	ATTAAA	-29	NA	121755549	121767853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121765133
WTC11_00051153	chr2	+	3668	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	-113	-838	5	164	multi-exon	FALSE	canonical	0	0	junction_1	455.970788538038	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAACAAACATTTAAAGG	121755462	True	NA	NA	False	AATAAA	-32	NA	121755549	121768017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
WTC11_00051156	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	382.375940665728	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121742239	True	NA	NA	False	ATTAAA	-29	NA	121755650	121767853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
WTC11_00051162	chr2	+	472	1	FSM	ENSG00000273950.1	ENST00000614637.1	258	1	-169	-45	-169	45	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTCAGCTACTTGGGA	NA	False	NA	NA	False	NA	NA	NA	127856720	127857192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127856700_127857200
WTC11_00051164	chr2	+	10782	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	-21	0	-21	0	multi-exon	FALSE	canonical	3	55	junction_1	18.7281706260916	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	128082152	True	NA	39	True	AGTAAA	-22	NA	128091178	128195677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
WTC11_00051169	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	857.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	130181059	True	NA	27	True	AATAAA	-16	NA	130181736	130190713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130181798_130182626_130182776_130190468
WTC11_00051170	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	130181094	False	NA	9	True	NA	NA	NA	130181771	130190695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130181831_130182626_130182776_130190468
WTC11_00051171	chr2	+	604	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	-5	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_2	32	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130170270	True	NA	41	True	AATAAA	-30	NA	130182256	130190727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182453_130182626_130182776_130190468
WTC11_00051172	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	130170326	True	NA	43	True	AATAAA	-32	NA	130182312	130190729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182453_130190468
WTC11_00051175	chr2	+	2574	9	FSM	ENSG00000136718.10	ENST00000409649.5	822	9	25	-1777	11	174	multi-exon	FALSE	canonical	3	215	junction_1	259.519718663149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGAACTGCCCTCTTGA	130336263	False	NA	NA	False	NA	NA	NA	130342934	130348141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130342963_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
WTC11_00051187	chr2	+	2391	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	-12	0	0	0	multi-exon	FALSE	canonical	3	867	junction_3	63.539478327434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	130336238	True	NA	21	True	AATAAA	-19	NA	130342909	130347810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
WTC11_00051198	chr2	+	3470	3	FSM	ENSG00000072135.13	ENST00000481492.1	1394	3	-455	-1621	-455	205	multi-exon	FALSE	canonical	3	67	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCACCACG	NA	False	NA	NA	False	ATTAAA	-42	NA	130371542	130375610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130372484_130372872_130372948_130373156
WTC11_00051199	chr2	+	2500	2	FSM	ENSG00000072135.13	ENST00000462321.1	1717	2	84	-867	84	-5	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGATTCAGAGGTCTGTTT	130372488	True	NA	6	True	AATAAA	-12	NA	130372691	130375400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130372948_130373156
WTC11_00051200	chr2	+	2603	4	NNC	ENSG00000240253.6	novel	552	4	NA	NA	-306	278	intron_retention	FALSE	canonical	2	10	junction_1	23.3285709425636	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAAAGTGAGTGGTC	130692851	True	NA	NA	False	AATAAA	-9	NA	130692975	130704739	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130693797_130696341_130696410_130702253_130702429_130703200
WTC11_00051201	chr2	+	2728	5	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-306	278	intron_retention	FALSE	canonical	3	9	junction_1	21.6953335996476	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAAAGTGAGTGGTC	130692851	True	NA	NA	False	AATAAA	-9	NA	130692975	130704739	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130693797_130695466_130695592_130696341_130696410_130702253_130702429_130703200
WTC11_00051217	chr2	+	3837	8	FSM	ENSG00000115762.17	ENST00000693505.1	3812	8	-31	6	3	-6	multi-exon	FALSE	canonical	3	474	junction_6	73.8937461107888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTTTCATTGTGAC	131099457	True	NA	12	True	ATTAAA	-12	NA	131105304	131149839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131146636
WTC11_00051218	chr2	+	3842	8	NIC	ENSG00000115762.17	novel	4208	8	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	70	junction_6	201.412664012196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTGACTTCTGTTG	131099481	True	NA	20	True	ATTAAA	-20	NA	131105328	131149847	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140169_131140276_131146636
WTC11_00051222	chr2	+	3785	18	FSM	ENSG00000152117.18	ENST00000438378.2	3785	18	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_8	35.3522070981828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131492800	False	NA	34	True	AATAAA	-18	NA	131492812	131521573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
WTC11_00051225	chr2	+	1304	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	62	junction_2	28.4648010349481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527854	False	NA	NA	False	AATAAA	-17	NA	131527873	131533666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
WTC11_00051226	chr2	+	1502	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	41	0	-14	0	multi-exon	FALSE	canonical	3	48	junction_2	31.7573709907621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527854	False	NA	NA	False	AATAAA	-17	NA	131527873	131533666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
WTC11_00051229	chr2	+	1442	8	NNC	ENSG00000163040.15	novel	1543	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	59.0299128598789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527931	False	NA	NA	False	AATAAA	-17	NA	131527950	131533666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131528347_131529646_131529692_131530578_131530828_131531651_131531803_131532709_131532782_131532863_131532938_131533012_131533070_131533268
WTC11_00051234	chr2	+	4304	4	FSM	ENSG00000287151.1	ENST00000655714.1	4558	4	0	254	0	-172	multi-exon	FALSE	canonical	2	5	junction_3	16.1107279647928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAATTCCAAATAATAAC	131683951	False	NA	NA	False	NA	NA	NA	131684896	131699607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131686212_131686329_131686442_131688165_131688304_131696868
WTC11_00051245	chr2	+	1374	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	-48	-187	-38	187	multi-exon	FALSE	canonical	3	113	junction_1	20	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAGATTAGAGGCAAA	NA	False	NA	NA	False	AATACA	-19	NA	135052250	135059253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135052326_135052429_135052486_135058010
WTC11_00051247	chr2	+	2262	3	FSM	ENSG00000048991.17	ENST00000463230.5	2241	3	-21	0	-3	0	multi-exon	FALSE	canonical	3	241	junction_1	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGAGGCAGAGGTTAC	135525658	True	NA	NA	False	NA	NA	NA	135531451	135606676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135531634_135602499_135602709_135604805
WTC11_00051249	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_13	45.2105496720942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	135525707	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00051250	chr2	+	4660	26	FSM	ENSG00000048991.17	ENST00000264160.8	4648	26	-12	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	88.7675255935412	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTTTGTCTTTTTTTT	135525707	True	NA	NA	False	AATAAA	-16	NA	135531500	135725270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135616151_135616194_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641791_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00051251	chr2	+	4267	23	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_13	43.1050274147895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCACTTTGTCTTTTTTT	135525712	True	NA	NA	False	AATAAA	-15	NA	135531505	135725269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00051255	chr2	+	1349	8	ISM	ENSG00000048991.17	ENST00000264160.8	4648	26	107119	49720	-9	23529	internal_fragment	FALSE	canonical	3	26	junction_4	95.3680304110859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATCTTCTATGCTCTC	135638621	False	NA	NA	False	AATAAA	-17	NA	135638631	135675550	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_135638656_135638738_135638790_135638895_135639123_135641535_135641791_135645378_135645528_135651732_135652033_135661269_135661394_135675331
WTC11_00051258	chr2	+	568	4	FSM	ENSG00000144224.17	ENST00000426921.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	240.366849258009	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGACCTCAACATCC	135735451	True	NA	-14	True	NA	NA	NA	135741785	135761881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135742012_135748266_135748370_135755516_135755692_135761817
WTC11_00051260	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	61.9899185351941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	135735520	True	NA	NA	False	AATAAA	-16	NA	135741854	135785056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
WTC11_00051270	chr2	+	5214	11	FSM	ENSG00000121989.15	ENST00000241416.12	5214	11	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	15.9527427108946	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTTGCATATGCAGTT	147844866	False	NA	11	True	AATAAA	-14	NA	147845028	147930822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_147845208_147896300_147896509_147899457_147899568_147899743_147899899_147915190_147915335_147917282_147917427_147918446_147918593_147920229_147920345_147922972_147923112_147926030_147926162_147927079
WTC11_00051276	chr2	+	2935	19	FSM	ENSG00000168280.18	ENST00000678291.1	2957	19	-15	37	-15	-8	multi-exon	FALSE	canonical	3	143	junction_8	20.0776271285008	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	148869318	True	NA	NA	False	AATGAA	-4	NA	148875211	148998828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399
WTC11_00051278	chr2	+	6966	26	FSM	ENSG00000168280.18	ENST00000677280.1	6951	26	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_18	41.2051647248255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	148869318	True	NA	NA	False	AATAAA	-17	NA	148875211	149026759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998402_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
WTC11_00051282	chr2	+	7065	11	FSM	ENSG00000168280.18	ENST00000679236.1	7065	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	15.4560667700421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	148988762	False	NA	NA	False	AATAAA	-17	NA	148988791	149026759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
WTC11_00051284	chr2	+	4841	7	FSM	ENSG00000168280.18	ENST00000482151.1	4841	7	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	8.53912563829967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	148999917	False	NA	NA	False	AATAAA	-17	NA	148999934	149026759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
WTC11_00051286	chr2	+	1289	7	NIC	ENSG00000150556.17	novel	1306	7	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	6.44635986860457	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAATGCATGCTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	149119108	149215254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_149119164_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
WTC11_00051289	chr2	+	7721	35	FSM	ENSG00000080345.18	ENST00000428287.6	7722	35	1	0	1	0	multi-exon	TRUE	canonical	0	0	junction_16	53.7550190784504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGGTGAAACATGTAA	151398700	True	NA	-67	True	NA	NA	NA	151409886	151475388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00051291	chr2	+	14677	36	FSM	ENSG00000080345.18	ENST00000444746.7	14662	36	-15	0	1	0	multi-exon	FALSE	canonical	0	0	junction_16	51.2316547554302	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTACTTGTTTTTGTT	151398700	True	NA	NA	False	AATAAA	-16	NA	151409886	151482172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00051292	chr2	+	15003	35	FSM	ENSG00000080345.18	ENST00000243326.9	15003	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	49.8339543923681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTACTTGTTTTTGTT	151398754	True	NA	NA	False	AATAAA	-16	NA	151409940	151482172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00051293	chr2	+	13884	36	NNC	ENSG00000080345.18	novel	14662	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	55.5746969292277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTACTTGTTTTTGTT	151398754	True	NA	NA	False	AATAAA	-16	NA	151409940	151482172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856_151477761_151478421
WTC11_00051295	chr2	+	545	2	FSM	ENSG00000080345.18	ENST00000467762.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTCTATGCACAA	NA	False	NA	66	True	ATTAAA	-14	NA	151505947	151507112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151506376_151506995
WTC11_00051302	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	33.0689515339624	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	152709428	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
WTC11_00051308	chr2	+	5812	17	FSM	ENSG00000115159.16	ENST00000438166.7	5812	17	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	22.2920950114609	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	156434656	True	NA	13	True	NA	NA	NA	156436378	156586403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_156436514_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
WTC11_00051309	chr2	+	1204	1	FSM	ENSG00000270557.1	ENST00000604340.1	883	1	-350	29	-350	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTAATAAACTGGCT	157877268	False	NA	NA	False	NA	NA	NA	157877332	157878536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_157877300_157878500
WTC11_00051310	chr2	+	3846	20	ISM	ENSG00000144283.23	ENST00000389759.8	4603	22	-38	4282	-38	-208	5prime_fragment	TRUE	canonical	0	0	junction_9	35.019662067215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCACAGTCCCTTTGCTC	158455139	True	NA	21	True	AATAAA	-40	NA	158456913	158677147	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738
WTC11_00051312	chr2	+	4468	21	NIC	ENSG00000144283.23	novel	4603	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.4903972142972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCTATTCTTT	158455177	True	NA	20	True	AATAAA	-21	NA	158456951	158681426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634072_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
WTC11_00051313	chr2	+	4603	22	FSM	ENSG00000144283.23	ENST00000389759.8	4603	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	34.7729271500838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCTATTCTTTTTA	158455177	True	NA	23	True	AATAAA	-24	NA	158456951	158681429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
WTC11_00051314	chr2	+	5779	21	FSM	ENSG00000144283.23	ENST00000389757.7	5777	21	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_9	32.8199634369083	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATACAAAAGTGCATCAT	158457085	False	NA	NA	False	AAGAAA	-18	NA	158457096	158682879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
WTC11_00051322	chr2	+	5291	2	FSM	ENSG00000115183.15	ENST00000496406.1	7586	2	2294	1	2294	-1	multi-exon	FALSE	canonical	3	43	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTGCACTAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	159226686	159232658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159228897_159229577
WTC11_00051324	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	174.779861540167	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	159700180	True	NA	12	True	AATAAA	-27	NA	159712498	159771027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
WTC11_00051335	chr2	+	738	5	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	90	30402	2	0	5prime_fragment	FALSE	canonical	3	4	junction_2	75.0149985002999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	161157784	True	NA	NA	False	AATAAA	-19	NA	161160438	161204979	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674
WTC11_00051336	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	16.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	NA	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161179762_161203486_161203596_161204674
WTC11_00051344	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	18.2976926292786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	162340141	True	NA	NA	False	NA	NA	NA	162344158	162360971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
WTC11_00051345	chr2	+	1666	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	28	0	28	0	multi-exon	FALSE	canonical	2	4	junction_1	133.881305945351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	162344170	True	NA	26	True	AATAAA	-21	NA	162344365	162361122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
WTC11_00051354	chr2	+	7135	13	FSM	ENSG00000138398.17	ENST00000677392.1	7125	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	393	junction_1	45.1616694652544	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	NA	False	NA	NA	False	ATTAAA	-1	NA	169584331	169641387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00051355	chr2	+	6351	14	FSM	ENSG00000138398.17	ENST00000678088.1	6341	14	-10	0	-10	0	multi-exon	FALSE	canonical	3	24	junction_10	128.293026278578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATACTATAATAAACAGT	NA	False	NA	NA	False	ATTAAA	-4	NA	169584331	169641390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00051358	chr2	+	6733	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	-280	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	103.058953657574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	169576026	True	NA	NA	False	ATTAAA	-3	NA	169584366	169641389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00051364	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	18.9267594221045	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	169728347	True	NA	14	True	AATAAA	-15	NA	169733831	169751878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
WTC11_00051369	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	993.920062635367	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169799229	False	NA	27	True	AATAAA	-28	NA	169799278	169812064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
WTC11_00051375	chr2	+	8021	39	FSM	ENSG00000144357.18	ENST00000272793.11	8009	39	-12	0	-12	0	multi-exon	FALSE	non_canonical	3	27	junction_6	9.71038368173665	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGCTTACATGTTT	169825762	True	NA	27	True	AATAAA	-38	NA	169827441	170084131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169828053_169872235_169872376_169875790_169875950_169877493_169877638_169878524_169878575_169891164_169891232_169895180_169895312_169896506_169896736_169905113_169905294_169906030_169906165_169914059_169914147_169923928_169923995_169924083_169924174_169925618_169925748_169926691_169926745_169926837_169926972_169927319_169927406_169928726_169928869_169932911_169933009_169942492_169942635_169946287_169946393_169947541_169947716_169949604_169950066_169958437_169958527_169986644_169986795_169994322_169994457_170001303_170001415_170006989_170007191_170008803_170008941_170015280_170015367_170029345_170029449_170040881_170040986_170055459_170055585_170061078_170061187_170061317_170061444_170073427_170073608_170079813_170080024_170080544_170080685_170081725
WTC11_00051380	chr2	+	1350	1	FSM	ENSG00000128692.8	ENST00000461070.1	984	1	-98	-268	-98	268	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAAGTTATTATAA	NA	False	NA	NA	False	TTTAAA	-30	NA	170751706	170753056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170751700_170753100
WTC11_00051382	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	11	junction_1	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	170770986	False	NA	8	True	ATTAAA	-22	NA	170771337	170778584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
WTC11_00051395	chr2	+	1454	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	-393	-298	-292	298	multi-exon	FALSE	canonical	1	1	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGCATTTGTTATTAC	NA	False	NA	7	True	AATAAA	-18	NA	171521954	171551438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171522739_171541584_171541794_171550977
WTC11_00051396	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	171521906	True	NA	NA	False	AATAAA	-14	NA	171522473	171558129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
WTC11_00051399	chr2	+	4246	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	-29	-1723	0	-24	multi-exon	FALSE	canonical	3	70	junction_15	183.891707262726	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAATAAATCTCTGAAATA	171685613	True	NA	NA	False	NA	NA	NA	171687471	171750134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
WTC11_00051401	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	62.9538102279935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171687602	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
WTC11_00051403	chr2	+	2429	16	NIC	ENSG00000077380.16	novel	2572	16	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_15	167.403969155122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171682275	False	NA	5	True	AATAAA	-17	NA	171687811	171748411	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
WTC11_00051404	chr2	+	2193	14	FSM	ENSG00000077380.16	ENST00000482454.5	2590	14	397	0	397	0	multi-exon	FALSE	canonical	3	40	junction_1	238.123929744912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCAAATTTTCATTT	NA	False	NA	3	True	AATAAA	-15	NA	171707286	171748409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
WTC11_00051407	chr2	+	1674	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	-44	4	-31	0	multi-exon	FALSE	canonical	3	557	junction_1	101.545260844611	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	171911160	True	NA	8	True	AATAAA	-16	NA	171922416	171983682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
WTC11_00051412	chr2	+	970	7	FSM	ENSG00000091409.16	ENST00000412899.5	970	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	184.377029179041	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGGAGGTGCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	172427353	172474977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172427471_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928
WTC11_00051414	chr2	+	5816	26	FSM	ENSG00000091409.16	ENST00000684293.1	5816	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_25	123.557921640015	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGTTGTCTTTGGACT	172418485	True	NA	18	True	ATTAAA	-32	NA	172427585	172506459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172501771_172501902_172504090
WTC11_00051420	chr2	+	2990	12	FSM	ENSG00000152256.14	ENST00000410055.5	2990	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	40.6492759635844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCACAGTATAACTGTA	172553155	True	NA	NA	False	AATAAA	-17	NA	172556050	172599137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828_172596024_172597612
WTC11_00051422	chr2	+	15044	11	FSM	ENSG00000152256.14	ENST00000282077.8	14072	11	140	-1112	-83	1112	multi-exon	FALSE	canonical	3	111	junction_6	27.9751675598199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGTTGACAACTACA	172553334	False	NA	NA	False	NA	NA	NA	172556229	172609781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828
WTC11_00051429	chr2	+	4216	20	FSM	ENSG00000091436.17	ENST00000375213.8	3859	20	-369	12	42	-12	multi-exon	FALSE	canonical	3	14	junction_18	19.4621587515028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTCTGAGATTCTGT	NA	False	NA	-1	True	AATAAA	-9	NA	173075476	173268003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
WTC11_00051430	chr2	+	4010	10	FSM	ENSG00000091436.17	ENST00000476618.5	4010	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	7.91622805802528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGGCTGTGCAAAAAT	173074773	True	NA	NA	False	AAAAAG	-9	NA	173075867	173212825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728
WTC11_00051434	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	76.4804897089607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	173341429	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
WTC11_00051435	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	206.044463618061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	173341429	True	NA	21	True	AATAAA	-27	NA	173354871	173368997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
WTC11_00051436	chr2	+	3445	10	NIC	ENSG00000144354.14	novel	2778	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	76	junction_5	266.272393714258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341464	True	NA	15	True	AATAAA	-14	NA	173354906	173368904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173363999_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
WTC11_00051441	chr2	+	1122	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	-58	-265	17	-81	multi-exon	FALSE	canonical	0	0	junction_1	259.945346819929	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTTTCTTTTGATTT	176261702	True	NA	14	True	AATAAA	-25	NA	176269411	176337944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
WTC11_00051443	chr2	+	1360	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	627	junction_2	36.6757564490647	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	176261713	True	NA	12	True	AATAAA	-21	NA	176269422	176338025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
WTC11_00051447	chr2	+	5654	12	FSM	ENSG00000170144.21	ENST00000677337.1	5654	12	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_11	1252.98741856189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTACCAGTAAGTAAT	177142946	True	NA	-33	True	NA	NA	NA	177212723	177223919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219157_177219246_177219315_177219407_177221977_177222059
WTC11_00051448	chr2	+	5750	11	FSM	ENSG00000170144.21	ENST00000676629.1	5750	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_10	1064.96234675222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTACCAGTAAGTAAT	177142946	True	NA	-33	True	NA	NA	NA	177212723	177223919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177221977_177222059
WTC11_00051450	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	1070.8133749401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
WTC11_00051451	chr2	+	5829	10	FSM	ENSG00000170144.21	ENST00000678421.1	5829	10	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	502.203588641543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00051452	chr2	+	6226	8	FSM	ENSG00000170144.21	ENST00000676762.1	6209	8	-17	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	547.802735238419	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00051453	chr2	+	3045	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	-17	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1259.97038060424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142946	True	NA	-10	True	AATAAA	-1	NA	177212723	177223942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
WTC11_00051454	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1045.04727644255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142946	True	NA	-10	True	AATAAA	-1	NA	177212723	177223942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
WTC11_00051455	chr2	+	6122	9	FSM	ENSG00000170144.21	ENST00000483137.2	6122	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	1185.0383366689	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTACCAGTAAGTAAT	177142971	True	NA	-33	True	NA	NA	NA	177212748	177223919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177221977_177222059
WTC11_00051456	chr2	+	5964	10	FSM	ENSG00000170144.21	ENST00000677508.1	5953	10	-11	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	984.737302815099	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142971	True	NA	-32	True	NA	NA	NA	177212748	177223920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00051457	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	934.375304682225	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	177142971	True	NA	6	True	AATAAA	-17	NA	177212748	177223958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00051458	chr2	+	1935	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	112	junction_1	1074.22951458243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177213165	False	NA	-18	True	GATAAA	-36	NA	177213241	177220085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00051462	chr2	+	7633	20	FSM	ENSG00000018510.18	ENST00000264167.11	7633	20	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_12	46.0883771048095	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTGTTATAGAAATTGT	177386198	True	NA	12	True	AATAAA	-16	NA	177392772	177543834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
WTC11_00051467	chr2	+	7074	26	FSM	ENSG00000079156.17	ENST00000392505.6	3637	26	-25	-3412	-25	-248	multi-exon	FALSE	canonical	3	6	junction_11	13.3148939162128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCTCTAGAAATGTT	178193986	True	NA	3	True	ATTAAA	-15	NA	178194455	178399184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178344285_178344361_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
WTC11_00051468	chr2	+	6943	25	FSM	ENSG00000079156.17	ENST00000190611.9	10652	25	0	3709	0	-248	multi-exon	FALSE	canonical	3	32	junction_3	7.69187432005721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCTCTAGAAATGTT	178194042	True	NA	3	True	ATTAAA	-15	NA	178194511	178399184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
WTC11_00051477	chr2	+	2962	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	40	0	-6	0	multi-exon	FALSE	canonical	2	6	junction_1	5.43139024560011	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522523	True	NA	NA	False	NA	NA	NA	178523206	178540779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
WTC11_00051480	chr2	+	675	1	FSM	ENSG00000270956.1	ENST00000604692.1	675	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGGGGTACATGTGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	178541124	178541799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178541100_178541800
WTC11_00051487	chr2	+	1930	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	-376	1	-144	0	multi-exon	FALSE	canonical	3	581	junction_1	81.4803043686019	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCCTGTCGTAATAT	NA	False	NA	14	True	AATAAA	-16	NA	180980228	181063424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
WTC11_00051492	chr2	+	1607	6	FSM	ENSG00000170035.16	ENST00000602710.5	1556	6	-68	17	20	0	multi-exon	FALSE	canonical	3	17	junction_1	303.176252368156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCCTGTCGTAATAT	180980357	True	NA	14	True	AATAAA	-16	NA	180981055	181063424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180981478_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
WTC11_00051493	chr2	+	1534	6	NIC	ENSG00000170035.16	novel	1556	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	278.896683379348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTCCTGTCGTAATA	180981006	False	NA	13	True	AATAAA	-15	NA	180981035	181063423	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_180981386_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
WTC11_00051500	chr2	+	5325	18	FSM	ENSG00000138434.17	ENST00000431877.7	5308	18	-17	0	-17	0	multi-exon	FALSE	canonical	3	12	junction_5	5.27512934622244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	NA	False	NA	6	True	AATAAA	-19	NA	181891712	181930738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181920596_181920663_181921947_181922413_181928160_181928279_181929560
WTC11_00051503	chr2	+	6473	11	FSM	ENSG00000138434.17	ENST00000491720.5	6473	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	4.42831796509691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	181900823	False	NA	6	True	AATAAA	-19	NA	181900860	181930738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181918676_181918754_181918883_181919295_181919447_181920596_181920663_181921947_181922413_181928160_181928279_181929560
WTC11_00051507	chr2	+	19898	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	-2	110	0	-110	multi-exon	FALSE	canonical	3	67	junction_10	117.921286255138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAGTAAGAAATGTCAT	182704133	True	NA	NA	False	ATTAAA	-3	NA	182716254	182794354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
WTC11_00051513	chr2	+	2164	11	NNC	ENSG00000065548.18	novel	2032	10	NA	NA	-106	16790	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	210.366465958812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCAGATGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	186486146	186526151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542_186509356_186526126
WTC11_00051514	chr2	+	311	2	FSM	ENSG00000065548.18	ENST00000477672.1	304	2	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCCACGTCAGGTAAG	186478200	True	NA	NA	False	NA	NA	NA	186486259	186495319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_186486458_186495206
WTC11_00051516	chr2	+	2051	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	-19	0	-12	0	multi-exon	FALSE	canonical	3	547	junction_6	77.3114592307962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	186478181	True	NA	NA	False	AATAAA	-37	NA	186486240	186509361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
WTC11_00051524	chr2	+	2055	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188024793	True	NA	28	True	AATAAA	-17	NA	188033811	188040601	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188034061_188035422_188035757_188039129
WTC11_00051525	chr2	+	1879	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_1	59.5	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188024789	True	NA	28	True	AATAAA	-17	NA	188033807	188040601	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188034061_188035602_188035757_188039129
WTC11_00051526	chr2	+	1727	2	FSM	ENSG00000289205.1	ENST00000686960.1	1739	2	15	-3	15	3	multi-exon	FALSE	canonical	3	511	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAGGGATTTTGTC	188024790	True	NA	31	True	AATAAA	-20	NA	188033808	188040604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188034061_188039129
WTC11_00051530	chr2	+	3290	12	NNC	ENSG00000144366.16	novel	3294	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	124.064832424939	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188285736	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584268_188584404_188587854_188587950_188593939
WTC11_00051531	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.8876563559198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	188285808	True	NA	NA	False	NA	NA	NA	188291945	188542122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
WTC11_00051532	chr2	+	4236	12	NIC	ENSG00000144366.16	novel	3544	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	113.806418212886	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188285808	True	NA	NA	False	AATAAA	-15	NA	188291945	188595926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
WTC11_00051535	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	80.1356288317778	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	188286634	False	NA	NA	False	AATAAA	-20	NA	188292771	188595931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
WTC11_00051538	chr2	+	3716	15	NNC	ENSG00000144366.16	novel	3544	13	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	185.452287719532	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188287038	True	NA	NA	False	AATAAA	-15	NA	188292841	188595926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188293113_188334340_188334466_188383760_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541317_188569238_188569356_188570027_188570121_188582340_188582566_188584264_188584404_188587854_188587950_188593939
WTC11_00051539	chr2	+	3386	13	NNC	ENSG00000144366.16	novel	3544	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.854916688248	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188287051	True	NA	NA	False	AATAAA	-15	NA	188292854	188595926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188293113_188334340_188334466_188383760_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
WTC11_00051542	chr2	+	7427	3	FSM	ENSG00000144366.16	ENST00000451191.5	7427	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188570027	True	NA	34	True	NA	NA	NA	188570037	188595059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188570121_188584264_188584404_188587854
WTC11_00051546	chr2	+	4317	21	FSM	ENSG00000115368.10	ENST00000427960.5	4297	21	-20	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	108.872632006395	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434831	True	NA	25	True	AATAAA	-29	NA	189441461	189475552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189441579_189448378_189448509_189449244_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
WTC11_00051548	chr2	+	601	4	FSM	ENSG00000138381.10	ENST00000425590.1	567	4	-34	0	20	0	multi-exon	FALSE	canonical	3	59	junction_2	165.175327724479	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGGAATGGAGAAATTTT	189657072	True	NA	-41	True	NA	NA	NA	189661404	189666351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
WTC11_00051549	chr2	+	586	4	FSM	ENSG00000286053.2	ENST00000605941.5	573	4	-13	0	-13	0	multi-exon	FALSE	canonical	1	3	junction_2	191.483680766795	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTACCCAGCCTG	189657106	True	NA	-87	True	NA	NA	NA	189661438	189666305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189661611_189663900_189663955_189665356_189665452_189666040
WTC11_00051556	chr2	+	2592	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	-16	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	141.254825120541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189776033	True	NA	22	True	AATAAA	-18	NA	189784527	189877629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
WTC11_00051586	chr2	+	5008	30	NNC	ENSG00000128641.19	novel	5069	31	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	87.7329343887266	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTGTTTATTGGTG	191239497	True	NA	24	True	CATAAA	-13	NA	191245403	191425385	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_191245627_191247894_191248009_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
WTC11_00051587	chr2	+	5069	31	FSM	ENSG00000128641.19	ENST00000392318.8	5069	31	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_22	48.1315789153949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTGTTTATTGGTGC	191239497	True	NA	25	True	CATAAA	-14	NA	191245403	191425386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191400748_191400836_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
WTC11_00051590	chr2	+	4762	29	FSM	ENSG00000128641.19	ENST00000392316.5	4764	29	2	0	2	0	multi-exon	FALSE	canonical	3	57	junction_21	60.3137523661876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	NA	False	NA	28	True	CATAAA	-17	NA	191276886	191425389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
WTC11_00051595	chr2	+	3011	7	FSM	ENSG00000173559.15	ENST00000307849.7	3002	7	-9	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.4200640804527	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTTAGAAAATTT	191677744	True	NA	NA	False	ATTAAA	-22	NA	191678126	191687572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
WTC11_00051596	chr2	+	2222	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	-370	0	370	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATAGCTATAAGTTT	193170086	True	NA	NA	False	AATAAA	-45	NA	193170703	193173135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_193170803_193171012
WTC11_00051598	chr2	+	5383	11	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10322	0	intron_retention	FALSE	canonical	3	203	junction_2	330.605580715148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195582516	True	NA	16	True	AATAAA	-20	NA	195586298	195737700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_195586418_195606135_195606234_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
WTC11_00051599	chr2	+	5396	10	FSM	ENSG00000196950.14	ENST00000409086.7	5432	10	36	0	36	0	multi-exon	FALSE	canonical	2	2	junction_1	325.768152048184	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTGTTTTCTTTAG	195656760	False	NA	18	True	AATAAA	-22	NA	195656782	195737702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_195657011_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
WTC11_00051601	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_1	63.2410633905331	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195637549	True	NA	16	True	AATAAA	-20	NA	195657225	195737700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
WTC11_00051602	chr2	+	866	2	FSM	ENSG00000144395.18	ENST00000471033.5	861	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAGAACAAGCTACAGC	196637982	True	NA	NA	False	NA	NA	NA	196639709	196657429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_196639779_196656632
WTC11_00051605	chr2	+	710	7	FSM	ENSG00000144395.18	ENST00000495513.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	16.4966326530262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCCAGGCACATCTGTA	NA	False	NA	NA	False	AATGAA	-28	NA	196656744	196676250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142
WTC11_00051612	chr2	+	1355	5	FSM	ENSG00000115520.9	ENST00000409010.1	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	130.072095393286	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	197453775	True	NA	NA	False	AGTAAA	-15	NA	197453793	197474410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197454050_197459931_197460082_197462538_197462732_197470069_197470172_197473756
WTC11_00051613	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_1	6902.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	197493767	True	NA	-59	True	NA	NA	NA	197500139	197503296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197500440_197503038_197503129_197503208
WTC11_00051617	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	197343019	True	NA	27	True	AATAAA	-19	NA	197500378	197503382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197500440_197501073_197501239_197503038
WTC11_00051618	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	262.339474726927	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	197343019	True	NA	17	True	AATAAA	-14	NA	197500378	197503449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
WTC11_00051619	chr2	+	700	2	FSM	ENSG00000115541.11	ENST00000463841.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	3	15470	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAGTGTCTCCAAAATT	197500776	False	NA	26	True	AATAAA	-18	NA	197500881	197503381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197501239_197503038
WTC11_00051620	chr2	+	740	3	NNC	ENSG00000115541.11	novel	557	4	NA	NA	192	0	at_least_one_novel_splicesite	FALSE	canonical	3	1647	junction_1	6763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	197500912	True	NA	27	True	AATAAA	-19	NA	197501073	197503382	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_197501550_197503038_197503129_197503208
WTC11_00051621	chr2	+	3843	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	-5	-2817	-5	130	multi-exon	FALSE	canonical	3	280	junction_1	491.718641320646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACATGGTGAAACCCCA	197504297	True	NA	NA	False	NA	NA	NA	197516041	197553829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
WTC11_00051622	chr2	+	3906	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	-24	-130	-5	130	multi-exon	FALSE	canonical	3	1346	junction_1	125.478350031113	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACATGGTGAAACCCCA	197504297	True	NA	NA	False	NA	NA	NA	197516041	197553829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
WTC11_00051626	chr2	+	3715	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	217	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	199908179	True	NA	17	True	ATTAAA	-18	NA	199911268	199928273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199911772_199925061
WTC11_00051627	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	314	junction_3	22.3313120975907	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	199955456	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
WTC11_00051628	chr2	+	2767	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	-649	1	-6	0	multi-exon	FALSE	canonical	3	201	junction_1	244.737099627098	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	NA	False	NA	14	True	ATTAAA	-15	NA	200305874	200478529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00051629	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	315.750120964171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	200306126	False	NA	14	True	ATTAAA	-15	NA	200306150	200478529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00051632	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	254.585611009997	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	200292922	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00051633	chr2	+	2398	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_1	117.768718573228	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200292795	True	NA	15	True	ATTAAA	-16	NA	200306565	200478530	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00051641	chr2	+	4312	10	NNC	ENSG00000163535.18	novel	4478	9	NA	NA	-41	-300	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	84.8803078850841	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTATACTAGGCTGTC	200522199	True	NA	29	True	AATAAA	-30	NA	200526125	200583796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_200526253_200532302_200532356_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
WTC11_00051657	chr2	+	1649	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	-23	0	-4	0	multi-exon	FALSE	canonical	3	92	junction_1	144.991666427189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	200881363	True	NA	26	True	AATAAA	-20	NA	200889364	200903930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00051658	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	210.711525405649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	200881413	True	NA	-8	True	ATTAAA	-27	NA	200889414	200903896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00051662	chr2	+	795	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	-254	6	-225	0	multi-exon	FALSE	canonical	3	42	junction_1	846.100992133261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	201071571	True	NA	4	True	ATTAAA	-12	NA	201071775	201085744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
WTC11_00051664	chr2	+	510	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	-7	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	851.509378822231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	201053170	True	NA	4	True	ATTAAA	-12	NA	201072000	201085744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
WTC11_00051666	chr2	+	1458	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	90	0	62	0	multi-exon	FALSE	canonical	3	157	junction_1	850	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	201053283	False	NA	-6	True	ATTAAA	-2	NA	201072113	201085734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201073154_201078880_201079023_201085458
WTC11_00051673	chr2	+	472	3	NNC	ENSG00000003402.21	novel	1091	6	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	NA	False	NA	17	True	AATAAA	-17	NA	201140065	201141598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_201140230_201140356_201140440_201141373
WTC11_00051684	chr2	+	640	5	FSM	ENSG00000055044.11	ENST00000488403.5	871	5	0	231	0	0	multi-exon	FALSE	canonical	3	1102	junction_3	139.201966580936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGAATTACTGGAAAATA	202247399	True	NA	NA	False	NA	NA	NA	202265735	202284481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344
WTC11_00051686	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1102	junction_3	125.403023756794	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	202247426	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
WTC11_00051693	chr2	+	5982	8	FSM	ENSG00000138439.12	ENST00000392238.3	5982	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.011560171265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	202632850	True	NA	23	True	AATAAA	-16	NA	202634968	202769757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
WTC11_00051705	chr2	+	10559	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	-7	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	29.698484809835	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	203237121	True	NA	15	True	AATATA	-35	NA	203239010	203306026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
WTC11_00051707	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_8	87.5468128742814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	203317117	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
WTC11_00051710	chr2	+	1676	9	FSM	ENSG00000138443.17	ENST00000430418.5	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	184.870224752392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	203317229	True	NA	-53	True	ATTAAA	-27	NA	203328391	203427528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
WTC11_00051711	chr2	+	2243	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	-3	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	161.901204442709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	203317229	True	NA	NA	False	NA	NA	NA	203328391	203427948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
WTC11_00051713	chr2	+	5959	11	NNC	ENSG00000138443.17	novel	6567	12	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_10	126.865322291003	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	203328546	False	NA	15	True	AATAAA	-16	NA	203328574	203432169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176_203427270_203427495
WTC11_00051715	chr2	+	603	5	FSM	ENSG00000138443.17	ENST00000451591.6	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	173.75629485	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTTTTTTTGTTTTTTT	203380289	True	NA	NA	False	NA	NA	NA	203380307	203402734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203380385_203391045_203391144_203394699_203394847_203395658_203395781_203402575
WTC11_00051716	chr2	+	474	5	FSM	ENSG00000138443.17	ENST00000422719.5	474	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	188.409626877185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTCCTCCAGAAGATTA	203380339	True	NA	NA	False	NA	NA	NA	203380357	203416972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203380385_203391045_203391144_203395655_203395781_203402575_203402735_203416907
WTC11_00051719	chr2	+	5504	5	ISM	ENSG00000138443.17	ENST00000454023.1	940	6	3749	-4757	45	-1	3prime_fragment	FALSE	canonical	3	194	junction_3	94.0611503225428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGGTGTCTTGTTAACT	203394768	True	NA	14	True	AATAAA	-15	NA	203394792	203432168	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
WTC11_00051724	chr2	+	2393	10	FSM	ENSG00000118257.17	ENST00000417189.5	2386	10	-7	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	18.2154458945095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCAGGCACTGTGC	205680817	True	NA	7	True	AATAAA	-23	NA	205682499	205743698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
WTC11_00051725	chr2	+	6662	17	FSM	ENSG00000118257.17	ENST00000360409.7	6662	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	16.3401346383682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGCATCGTGGTTTT	205680817	True	NA	8	True	AATAAA	-17	NA	205682499	205798133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766819_205792234_205792286_205794753
WTC11_00051726	chr2	+	1049	3	ISM	ENSG00000118257.17	ENST00000417189.5	2386	10	4	45774	4	15	5prime_fragment	FALSE	canonical	1	13	junction_1	31.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTTCTTGAGTGAAAAG	205680828	True	NA	21	True	AATAAA	-31	NA	205682510	205697924	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_205682906_205683090_205683364_205697543
WTC11_00051734	chr2	+	899	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	-19	0	-10	0	multi-exon	FALSE	canonical	3	400	junction_1	1381.82857917407	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	206159556	False	NA	28	True	AATAAA	-14	NA	206159574	206162927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
WTC11_00051735	chr2	+	933	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	-21	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1913.44026106201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	206145871	True	NA	-98	True	GATAAA	-6	NA	206159614	206162801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
WTC11_00051736	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3767	junction_2	219.069304102606	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206145467	True	NA	29	True	AATAAA	-15	NA	206159894	206162928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
WTC11_00051739	chr2	+	6438	25	NIC	ENSG00000114948.13	novel	6334	26	NA	NA	-14	181	combination_of_known_junctions	FALSE	canonical	3	47	junction_24	9.4339811320566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACGATTCAGTT	206442119	True	NA	14	True	AATAAA	-24	NA	206443517	206621308	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_206444081_206445306_206445525_206481231_206481309_206530884_206530949_206542051_206542135_206543252_206543317_206547428_206547502_206548280_206548355_206550094_206550161_206557426_206557499_206559954_206560119_206561127_206561213_206562202_206562294_206565019_206565069_206567222_206567323_206570739_206570812_206571726_206571817_206573114_206573196_206587324_206587376_206588090_206588155_206589408_206589515_206592616_206592737_206594736_206594906_206596050_206596163_206617578
WTC11_00051740	chr2	+	6352	26	FSM	ENSG00000114948.13	ENST00000264377.8	6334	26	-18	0	-18	0	multi-exon	FALSE	canonical	3	22	junction_24	14.7586449242469	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTAGCTTTATGCT	206442115	True	NA	13	True	ATTAAA	-16	NA	206443513	206621127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206444081_206445306_206445525_206481231_206481309_206530884_206530949_206542051_206542135_206543252_206543317_206547428_206547502_206548280_206548355_206550094_206550161_206557426_206557499_206559954_206560119_206561127_206561213_206562202_206562294_206565019_206565069_206567222_206567323_206570739_206570812_206571726_206571817_206573114_206573196_206587324_206587376_206588090_206588155_206589408_206589515_206592616_206592737_206594736_206594906_206596050_206596163_206609909_206610001_206617578
WTC11_00051741	chr2	+	460	3	FSM	ENSG00000114948.13	ENST00000444281.1	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCATGCTATAAAAAGAAC	206594821	False	NA	NA	False	AGTAAA	-18	NA	206594834	206617855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206594906_206596050_206596163_206617578
WTC11_00051742	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	118.789417120528	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	206760663	True	NA	-7	True	AATAAA	-4	NA	206765605	206791806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
WTC11_00051743	chr2	+	6712	12	FSM	ENSG00000118246.14	ENST00000402774.8	6712	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	62.202149786133	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGCTTTTA	206760663	True	NA	9	True	AATAAA	-23	NA	206765605	206796189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206765748_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
WTC11_00051746	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	53.7864701853542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	207520014	True	NA	10	True	CATAAA	-18	NA	207529891	207603431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
WTC11_00051748	chr2	+	10117	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	-22	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	33.5577479724071	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	207520062	True	NA	NA	False	ATTAAA	-18	NA	207529939	207605988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
WTC11_00051757	chr2	+	477	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	7	13	7	0	multi-exon	FALSE	canonical	3	99	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGGACAATAGCATG	208254793	True	NA	13	True	AATAAA	-18	NA	208255220	208256168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_208255432_208255902
WTC11_00051759	chr2	+	1909	12	FSM	ENSG00000115020.17	ENST00000407449.5	1898	12	-11	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	9.52595410722163	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTTTTGTTCTACCCTT	208263176	True	NA	NA	False	NA	NA	NA	208266266	208305128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_208266416_208271510_208271692_208273583_208273734_208276711_208276831_208277536_208277709_208285725_208285934_208288728_208288819_208298640_208298780_208300936_208301095_208302241_208302354_208304170_208304319_208304845
WTC11_00051764	chr2	+	548	3	NNC	ENSG00000289113.1	novel	685	2	NA	NA	13	6143	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	5.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTACTTTGT	209297840	True	NA	21	True	AATAAA	-19	NA	209299702	209311039	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_209299939_209305114_209305260_209310872
WTC11_00051775	chr2	+	815	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	-19	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	255.417672646197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993511	True	NA	29	True	ATTAAA	-39	NA	210002623	210019961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
WTC11_00051776	chr2	+	2148	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	-18	0	-14	0	multi-exon	FALSE	canonical	3	45	junction_1	275.29402463548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	209993497	True	NA	NA	False	AATAAA	-17	NA	210002609	210021226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
WTC11_00051777	chr2	+	3208	6	FSM	ENSG00000197713.15	ENST00000359429.11	3180	6	-28	0	-14	0	multi-exon	TRUE	canonical	3	551	junction_1	48.1970953481639	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAATTTCTGTAAATA	209993497	True	NA	13	True	AATAAA	-21	NA	210002609	210022260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019668
WTC11_00051780	chr2	+	5723	39	FSM	ENSG00000021826.18	ENST00000430249.7	5723	39	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	7.20995003459698	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTTGAATCTGGTTT	210477256	True	NA	2	True	AATAAA	-16	NA	210477681	210679105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210477767_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
WTC11_00051781	chr2	+	854	1	FSM	ENSG00000270659.1	ENST00000604818.1	690	1	-210	46	-210	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCTTGAAAATATGAAA	213152611	False	NA	NA	False	NA	NA	NA	213152759	213153613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_213152800_213153600
WTC11_00051788	chr2	+	2275	15	FSM	ENSG00000138363.15	ENST00000435675.5	2275	15	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_9	86.5713401696861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	215296725	True	NA	26	True	AATAAA	-22	NA	215312090	215349763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
WTC11_00051791	chr2	+	3019	2	FSM	ENSG00000138363.15	ENST00000478734.1	486	2	-2526	-7	-2225	0	multi-exon	FALSE	canonical	3	1302	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	215346427	False	NA	26	True	AATAAA	-22	NA	215346458	215349763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_215349250_215349535
WTC11_00051794	chr2	+	3882	2	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGAAAAATAGACAGAAC	215922657	False	NA	NA	False	AATAAA	-28	NA	215922684	215931329	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_215922904_215927666
WTC11_00051800	chr2	+	2962	18	FSM	ENSG00000079246.16	ENST00000460284.5	2962	18	0	0	0	0	multi-exon	FALSE	canonical	3	4129	junction_6	336.820796767284	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTTGGTGTATTA	216116562	False	NA	27	True	TATAAA	-12	NA	216116884	216205423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
WTC11_00051809	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	216378180	True	NA	6	True	AATAAA	-12	NA	216498824	216501456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948
WTC11_00051811	chr2	+	759	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	-17	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	127	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378205	True	NA	17	True	AATAAA	-23	NA	216498849	216501467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948_216500032_216501340
WTC11_00051813	chr2	+	775	4	FSM	ENSG00000197756.10	ENST00000598925.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5894.91715142989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGGTGTTTGGATTT	216499057	False	NA	32	True	AATAAA	-23	NA	216499085	216529587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948_216500032_216520713_216520775_216529269
WTC11_00051821	chr2	+	1418	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	-8	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_1	271.588457044846	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	218194421	True	NA	14	True	AATAAA	-19	NA	218217180	218254348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
WTC11_00051822	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	3052	junction_2	215.024029664904	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	218194450	True	NA	22	True	AATAAA	-27	NA	218217209	218254356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
WTC11_00051823	chr2	+	2226	7	FSM	ENSG00000163466.16	ENST00000470146.5	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	3115	junction_6	190.173312767299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	218232959	False	NA	69	True	NA	NA	NA	218232999	218254108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
WTC11_00051825	chr2	+	874	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	-116	0	-116	0	multi-exon	FALSE	canonical	3	1088	junction_1	106	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	218270256	False	NA	26	True	AATAAA	-27	NA	218270275	218272947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218270603_218271380_218271550_218272569
WTC11_00051826	chr2	+	2916	9	FSM	ENSG00000127838.15	ENST00000258362.7	2991	9	75	0	-20	0	multi-exon	FALSE	canonical	3	27	junction_4	5.78251675311019	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	218322736	True	NA	19	True	AATAAA	-28	NA	218323247	218346791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218340787_218341533_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
WTC11_00051838	chr2	+	1453	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	-23	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	74.4747594552568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657332	True	NA	19	True	AATAAA	-15	NA	218659713	218663443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
WTC11_00051839	chr2	+	2027	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	-12	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8854563749042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657378	True	NA	18	True	AATAAA	-14	NA	218659759	218663442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
WTC11_00051845	chr2	+	4892	27	FSM	ENSG00000163482.12	ENST00000295709.8	4873	27	-19	0	-2	0	multi-exon	FALSE	canonical	3	42	junction_1	20.6858726053262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	NA	False	NA	14	True	NA	NA	NA	218672066	218702715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
WTC11_00051855	chr2	+	2093	6	FSM	ENSG00000163482.12	ENST00000419433.1	2093	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	51.1249449877455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGTCTGGCAGCTTAT	NA	False	NA	15	True	NA	NA	NA	218696528	218702716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218696602_218697038_218697214_218697462_218697611_218697902_218698002_218698601_218699349_218701865
WTC11_00051859	chr2	+	829	6	FSM	ENSG00000135912.11	ENST00000494428.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	26.1258492684927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTGCCAGGGCCACA	218745529	False	NA	NA	False	AATAAA	-33	NA	218745552	218748203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104
WTC11_00051861	chr2	+	1707	10	FSM	ENSG00000135912.11	ENST00000465558.5	1688	10	-19	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	69.0812725868757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTACCTTTCTTTCA	218746108	False	NA	NA	False	NA	NA	NA	218746131	218753354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218746232_218747002_218747195_218747289_218747373_218747596_218747739_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762
WTC11_00051863	chr2	+	1895	9	FSM	ENSG00000135929.9	ENST00000258415.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.95298686029343	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTGTCATTCTTTTTG	218782119	True	NA	10	True	AATAAA	-23	NA	218782146	218815293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814188_218814379_218814459_218814544_218814758_218814910
WTC11_00051870	chr2	+	1206	10	FSM	ENSG00000158552.13	ENST00000444522.6	1199	10	-10	3	-8	0	multi-exon	FALSE	canonical	3	100	junction_1	23.1996168550738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	219205539	True	NA	NA	False	AATAAA	-26	NA	219206773	219209648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219206846_219206969_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
WTC11_00051886	chr2	+	3256	11	FSM	ENSG00000163516.14	ENST00000463792.5	3245	11	-11	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	82.2072989460182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	219225113	True	NA	32	True	AATAAA	-14	NA	219229826	219236651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235876_219236009_219236096_219236321
WTC11_00051887	chr2	+	2560	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	-23	3	0	-3	multi-exon	TRUE	canonical	2	155	junction_5	46.7605001972629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGCCTTTAGTTCC	219225069	True	NA	57	True	AATAAA	-39	NA	219229782	219236676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
WTC11_00051899	chr2	+	1621	8	FSM	ENSG00000175084.13	ENST00000477226.6	1631	8	8	2	8	-2	multi-exon	FALSE	canonical	3	10	junction_3	2.9277002188456	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAAGCTGGCCCCTGTT	219419972	True	NA	2	True	AATAAA	-14	NA	219420050	219426732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
WTC11_00051908	chr2	+	1724	4	FSM	ENSG00000072195.15	ENST00000475921.1	1888	4	164	0	19	0	multi-exon	FALSE	canonical	3	78	junction_2	5.79271573232759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTGTTGTGTTTTT	219461304	False	NA	11	True	AATAAA	-16	NA	219461403	219466861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219462058_219462297_219462387_219464432_219464609_219466056
WTC11_00051915	chr2	+	1646	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	-16	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	70.2157242637595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	219494698	True	NA	-41	True	NA	NA	NA	219498871	219506935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051916	chr2	+	1826	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	-12	0	-12	0	multi-exon	TRUE	canonical	3	30	junction_8	118.883511288144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494679	True	NA	-12	True	NA	NA	NA	219498852	219506964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051917	chr2	+	1844	12	FSM	ENSG00000144591.20	ENST00000682102.1	1828	12	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	136.918869625425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494698	True	NA	-12	True	NA	NA	NA	219498871	219506964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505599_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051919	chr2	+	1540	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	-19	1	0	0	multi-exon	FALSE	canonical	3	163	junction_1	67.2298606771326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494698	True	NA	12	True	AATAAA	-16	NA	219498871	219506988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051924	chr2	+	1523	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	-22	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	90.5799217388833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494710	True	NA	12	True	AATAAA	-16	NA	219498883	219506988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051925	chr2	+	1840	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	-17	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	87.7044832884208	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494710	True	NA	13	True	AATAAA	-17	NA	219498883	219506989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051926	chr2	+	2392	12	FSM	ENSG00000144591.20	ENST00000683402.1	2392	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	114.12194434822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAACCCCGTGAACCTT	219494846	False	NA	-10	True	NA	NA	NA	219499019	219506966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00051948	chr2	+	5440	15	FSM	ENSG00000123983.15	ENST00000680251.1	5433	15	-7	0	-7	0	multi-exon	FALSE	canonical	3	34	junction_1	132.002029205182	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847685	True	NA	NA	False	AATAAA	-3	NA	222860976	222944609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
WTC11_00051949	chr2	+	5475	16	FSM	ENSG00000123983.15	ENST00000679545.1	5468	16	-7	0	-7	0	multi-exon	FALSE	canonical	3	8	junction_4	137.699899136572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847685	True	NA	NA	False	AATAAA	-3	NA	222860976	222944609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918069_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
WTC11_00051950	chr2	+	5547	16	FSM	ENSG00000123983.15	ENST00000680395.1	5539	16	-8	0	-7	0	multi-exon	FALSE	canonical	3	5	junction_1	160.887621235031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847685	True	NA	NA	False	AATAAA	-3	NA	222860976	222944609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
WTC11_00051952	chr2	+	5577	17	FSM	ENSG00000123983.15	ENST00000357430.8	5577	17	-30	30	0	0	multi-exon	FALSE	canonical	3	106	junction_2	138.584586083734	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847714	True	NA	NA	False	AATAAA	-3	NA	222861005	222944609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
WTC11_00051954	chr2	+	291	2	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATCACCTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	224225679	224227030	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_224225877_224226936
WTC11_00051962	chr2	+	1259	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	-12	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	237.895164673433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	227315499	True	NA	-15	True	NA	NA	NA	227325249	227357151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
WTC11_00051963	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_5	70.6588045940962	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	227315499	True	NA	49	True	NA	NA	NA	227325249	227357215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
WTC11_00051964	chr2	+	1557	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	-9	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.423317899883	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	227315499	True	NA	-11	True	TTTAAA	-22	NA	227325249	227357799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
WTC11_00051965	chr2	+	1778	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	-18	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	212.447448483965	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315499	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
WTC11_00051967	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	191.437952861804	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	227315525	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
WTC11_00051969	chr2	+	1840	3	FSM	ENSG00000168958.20	ENST00000476262.1	1824	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	143	junction_1	220.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTGTCTGTTGAAGG	NA	False	NA	21	True	AATAAA	-14	NA	227351664	227357831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227352574_227355676_227355762_227356985
WTC11_00051973	chr2	+	8455	13	FSM	ENSG00000173744.18	ENST00000409171.5	1783	13	0	-6672	0	0	multi-exon	FALSE	canonical	3	154	junction_11	108.186150017253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATAGCCTCTTTCA	227472360	False	NA	9	True	AATAAA	-22	NA	227472371	227561217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227472589_227491546_227491641_227519947_227520064_227523762_227523926_227524761_227524916_227531090_227531211_227533548_227533759_227534844_227535026_227536624_227536705_227536900_227536994_227551958_227552118_227553709_227553796_227554435
WTC11_00051974	chr2	+	1672	12	FSM	ENSG00000173744.18	ENST00000373671.7	1669	12	-3	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	151.251364313224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCACCTCTTGCACTGT	227472357	False	NA	NA	False	NA	NA	NA	227472368	227554545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227472589_227491546_227491641_227519947_227520064_227523762_227523926_227524761_227524916_227533548_227533759_227534844_227535026_227536624_227536705_227536900_227536994_227551958_227552118_227553703_227553796_227554435
WTC11_00051977	chr2	+	3712	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	-37	-862	-25	862	multi-exon	FALSE	canonical	0	0	junction_1	63.2894584868251	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCAAAATTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	229922465	230013981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
WTC11_00051981	chr2	+	1626	9	FSM	ENSG00000135932.12	ENST00000409788.7	1626	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	103.145452517307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTCAGCATCAGGCAC	230710522	False	NA	NA	False	AATAAA	-36	NA	230713547	230818750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230714059_230759958_230760116_230790871_230791037_230793212_230793332_230798728_230798898_230810262_230810323_230814048_230814115_230817753_230817898_230818515
WTC11_00051985	chr2	+	1895	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	-6	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	1688.69244905637	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	230802810	True	NA	14	True	AATAAA	-16	NA	230864941	230879247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
WTC11_00051986	chr2	+	2043	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	-6	0	6	multi-exon	TRUE	canonical	3	4003	junction_2	225.072965946601	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGTGGCTGGAGGGG	230802810	True	NA	21	True	AATAAA	-23	NA	230864941	230879254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
WTC11_00051987	chr2	+	1894	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	-6	0	6	multi-exon	FALSE	canonical	3	132	junction_3	1821.39074610584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGTGGCTGGAGGGG	230802848	True	NA	21	True	AATAAA	-23	NA	230864979	230879254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
WTC11_00051991	chr2	+	4127	20	FSM	ENSG00000173692.14	ENST00000676739.1	4140	20	-4	17	0	-17	multi-exon	FALSE	canonical	3	1187	junction_6	76.0720244806674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGGGCAACAGAGC	231040951	True	NA	NA	False	NA	NA	NA	231056844	231163067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339
WTC11_00051992	chr2	+	4097	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	-8	0	7	0	multi-exon	FALSE	canonical	3	1187	junction_6	75.8061495793685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	231040962	True	NA	NA	False	NA	NA	NA	231056855	231167229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
WTC11_00051993	chr2	+	3784	24	FSM	ENSG00000173692.14	ENST00000677230.1	3852	24	0	68	0	-68	multi-exon	FALSE	canonical	3	1187	junction_6	84.5334354047157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTTTGAGTGTTCA	231040951	True	NA	NA	False	NA	NA	NA	231056844	231171453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565
WTC11_00051996	chr2	+	3097	24	FSM	ENSG00000173692.14	ENST00000677180.1	3108	24	11	0	7	0	multi-exon	FALSE	canonical	2	3	junction_23	286.270002231624	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATGGACAAGACATTTG	231040962	True	NA	7	True	AATAAA	-11	NA	231056855	231172746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231172534
WTC11_00051998	chr2	+	3491	27	FSM	ENSG00000173692.14	ENST00000678112.1	3498	27	7	0	7	0	multi-exon	FALSE	canonical	1	1	junction_24	493.584026107412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTTAATAAATGTATCT	231040962	True	NA	-26	True	AATAAA	-43	NA	231056855	231172778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
WTC11_00051999	chr2	+	3415	26	FSM	ENSG00000173692.14	ENST00000677000.1	3411	26	-4	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	378.139517109757	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	231040951	True	NA	-2	True	AATAAA	-12	NA	231056844	231172802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
WTC11_00052001	chr2	+	3453	24	FSM	ENSG00000173692.14	ENST00000431051.6	3442	24	-11	0	7	0	multi-exon	FALSE	canonical	1	2	junction_3	291.367066577234	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAAGGCCAAGGTGG	231040962	True	NA	NA	False	NA	NA	NA	231056855	231173116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
WTC11_00052002	chr2	+	546	2	FSM	ENSG00000173692.14	ENST00000491229.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTTCAGCCTGGG	231170380	False	NA	21	True	AATAAA	-25	NA	231170401	231172760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231170722_231172534
WTC11_00052003	chr2	+	1960	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	-19	0	18	0	multi-exon	FALSE	canonical	3	15	junction_11	72.4557431177391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	231194779	True	NA	NA	False	NA	NA	NA	231198611	231260004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
WTC11_00052005	chr2	+	2114	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	-23	0	18	0	multi-exon	FALSE	canonical	3	47	junction_8	50.3449596131406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194779	True	NA	-4	True	TTTAAA	-11	NA	231198611	231345181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00052008	chr2	+	7898	25	FSM	ENSG00000135931.19	ENST00000611582.5	7879	25	-19	0	18	0	multi-exon	FALSE	canonical	3	6	junction_24	87.4162992524849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCC	231194779	True	NA	7	True	NA	NA	NA	231198611	231376848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974_231345091_231355797_231355935_231360753_231360884_231369952_231370126_231371512
WTC11_00052015	chr2	+	2272	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4551979406678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	231194828	True	NA	4	True	AATAGA	-3	NA	231198660	231278857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
WTC11_00052017	chr2	+	2412	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	-15	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.542123654034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	231194828	True	NA	-3	True	TTTAAA	-12	NA	231198660	231345182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00052018	chr2	+	2333	21	FSM	ENSG00000135931.19	ENST00000683575.1	2333	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.1080889377718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	231194920	True	NA	14	True	AATAAA	-17	NA	231198752	231345199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00052024	chr2	+	3539	2	FSM	ENSG00000156966.7	ENST00000287590.6	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	231370699	True	NA	17	True	AATAAA	-19	NA	231395709	231401164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231395815_231397730
WTC11_00052026	chr2	+	1119	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	-11	0	-11	0	multi-exon	FALSE	canonical	2	299	junction_1	11588.2318835748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	231707605	False	NA	39	True	NA	NA	NA	231707618	231713465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
WTC11_00052027	chr2	+	1429	5	FSM	ENSG00000187514.17	ENST00000409115.8	1215	5	-259	45	-250	0	multi-exon	FALSE	canonical	3	23814	junction_2	2001.60952423294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	231708180	False	NA	-35	True	NA	NA	NA	231708265	231713506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442_231712517_231712803
WTC11_00052029	chr2	+	1649	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	-14	0	0	0	multi-exon	FALSE	canonical	3	27716	junction_2	447.621119549409	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	231708439	False	NA	-35	True	NA	NA	NA	231708515	231713506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
WTC11_00052030	chr2	+	1212	5	FSM	ENSG00000187514.17	ENST00000341369.11	1212	5	0	0	0	0	multi-exon	FALSE	canonical	3	2595	junction_2	11158.5447191827	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCTGTCTCAAGCCTG	231708439	False	NA	-5	True	AATAAA	-30	NA	231708515	231713536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711420_231711886_231711984_231712442_231712517_231712803
WTC11_00052034	chr2	+	550	2	FSM	ENSG00000144524.18	ENST00000479430.5	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAATTAGATTGTTGCT	231781294	True	NA	NA	False	NA	NA	NA	231781706	231788927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231781884_231788554
WTC11_00052035	chr2	+	600	3	FSM	ENSG00000144524.18	ENST00000452375.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTAAGTAATTTTAATG	231781294	True	NA	NA	False	NA	NA	NA	231781706	231791169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231781884_231788554_231788733_231790924
WTC11_00052042	chr2	+	2577	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	-14	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	441.273944254078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779624	True	NA	8	True	AATAAA	-22	NA	231786433	231809253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
WTC11_00052043	chr2	+	2524	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	-11	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	75.4160681375881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779624	True	NA	8	True	AATAAA	-22	NA	231786433	231809253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
WTC11_00052044	chr2	+	3299	7	FSM	ENSG00000144524.18	ENST00000461350.5	3299	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	479.930782046282	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCGTGTCAATATTTGT	231789619	False	NA	9	True	AATACA	-20	NA	231789653	231808723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231791174_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801139_231801208_231807486
WTC11_00052047	chr2	+	1963	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	85	0	-85	multi-exon	FALSE	canonical	3	45	junction_1	11.6440256498057	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTAACTGTGCTCCAGG	231961670	False	NA	NA	False	NA	NA	NA	231961683	232131805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
WTC11_00052048	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	12.8237085119711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	231960562	True	NA	4	True	ATTAAA	-19	NA	231961712	232337192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
WTC11_00052051	chr2	+	1023	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	-88	32	-58	0	multi-exon	FALSE	canonical	3	1059	junction_6	116.896915651735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	232550590	False	NA	-17	True	NA	NA	NA	232550600	232569178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
WTC11_00052056	chr2	+	3626	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	-99	-2	-75	0	multi-exon	FALSE	canonical	3	38	junction_7	578.803057690469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	232550573	False	NA	27	True	AATAAA	-20	NA	232550583	232583644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
WTC11_00052071	chr2	+	596	6	FSM	ENSG00000204120.16	ENST00000483164.5	577	6	-19	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	14.0939703419583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAATAAATGATGCAGA	232690759	True	NA	-27	True	GATAAA	-42	NA	232697349	232736015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232735752
WTC11_00052072	chr2	+	1273	7	FSM	ENSG00000204120.16	ENST00000482666.5	1261	7	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.432037465981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTTGCATTGTATGG	232690759	True	NA	NA	False	AATAAA	-16	NA	232697349	232736541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232724573_232724692_232731121_232731235_232735154_232735239_232735762
WTC11_00052075	chr2	+	1116	5	FSM	ENSG00000204120.16	ENST00000489328.1	1116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6316775935314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTATAGTTACATCTT	232690792	True	NA	NA	False	TATAAA	-16	NA	232697382	232736648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735762
WTC11_00052081	chr2	+	3330	18	FSM	ENSG00000085978.22	ENST00000392017.9	3298	18	-35	3	-32	0	multi-exon	TRUE	canonical	3	46	junction_8	31.4553564018401	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	233248065	True	NA	16	True	AATAAA	-22	NA	233251637	233295666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
WTC11_00052086	chr2	+	3226	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	-21	8	0	0	multi-exon	FALSE	canonical	3	98	junction_7	18.0449741964349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	233248112	True	NA	16	True	AATAAA	-22	NA	233251684	233295666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
WTC11_00052096	chr2	+	10666	17	FSM	ENSG00000157985.19	ENST00000336665.9	5427	17	0	-5239	0	0	multi-exon	FALSE	canonical	3	29	junction_11	11.2722003175955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTTCCGTGGAGTTGT	235493871	False	NA	13	True	AATAAA	-19	NA	235494106	236131793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235494850_235709178_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
WTC11_00052099	chr2	+	677	3	FSM	ENSG00000233611.4	ENST00000692928.1	698	3	17	4	-6	-4	multi-exon	FALSE	canonical	3	22	junction_2	20	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACCCGATTCTTTGAAGC	236166510	True	NA	24	True	GATAAA	-25	NA	236167458	236169796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_236167670_236169232_236169385_236169482
WTC11_00052106	chr2	+	1023	4	FSM	ENSG00000115648.14	ENST00000477457.1	716	4	-159	-148	-159	0	multi-exon	FALSE	canonical	3	23	junction_3	7.31816613336672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATATGTGTATTCTT	NA	False	NA	18	True	AAAAAG	-18	NA	237546245	237553991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237546684_237549220_237549279_237552336_237552438_237553565
WTC11_00052107	chr2	+	2180	13	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	178.562372389407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237627421	False	NA	21	True	ATTAAA	-23	NA	237627534	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00052109	chr2	+	2186	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	159.195965312884	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGCAATGTGGTTCTA	237627337	False	NA	15	True	ATTAAA	-17	NA	237627450	237780309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00052110	chr2	+	3719	8	FSM	ENSG00000124831.19	ENST00000289175.10	3709	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	284	junction_7	191.495617256822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACAACACAA	237692109	False	NA	NA	False	NA	NA	NA	237692134	237765279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
WTC11_00052111	chr2	+	4347	9	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_8	216.39893715081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	237688845	True	NA	10	True	AATAAA	-21	NA	237692214	237765915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237762602
WTC11_00052112	chr2	+	4370	10	FSM	ENSG00000124831.19	ENST00000244815.9	4370	10	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	323.467326187841	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	237688846	True	NA	10	True	AATAAA	-21	NA	237692215	237765915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237692522_237708543_237708631_237719522_237719568_237720771_237720823_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
WTC11_00052113	chr2	+	2338	14	NNC	ENSG00000124831.19	novel	3365	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	253.782905873523	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237688848	True	NA	21	True	ATTAAA	-23	NA	237692217	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237775540_237775601_237779421
WTC11_00052116	chr2	+	2787	6	FSM	ENSG00000124831.19	ENST00000478958.5	2869	6	82	0	82	0	multi-exon	FALSE	canonical	3	14	junction_1	213.554114921722	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237768255	False	NA	21	True	ATTAAA	-23	NA	237768278	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237769819_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00052119	chr2	+	1288	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	-46	0	-46	0	multi-exon	FALSE	canonical	3	38	junction_4	130.796597815081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	237966873	False	NA	-44	True	NA	NA	NA	237966898	238041886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
WTC11_00052121	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	26.5873821368124	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	237962165	True	NA	NA	False	NA	NA	NA	237967013	238042782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
WTC11_00052126	chr2	+	430	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	28	0	-7	0	multi-exon	FALSE	canonical	3	412	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	238055521	True	NA	4	True	AATAAA	-17	NA	238060993	238068231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064
WTC11_00052129	chr2	+	1785	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	-11	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	28.8663351695786	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	238055547	True	NA	36	True	NA	NA	NA	238061019	238092083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
WTC11_00052130	chr2	+	1628	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	3	-24	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	238055573	True	NA	12	True	NA	NA	NA	238061045	238092059	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
WTC11_00052145	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.3369119475886	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	238423167	True	NA	17	True	AATAAA	-24	NA	238426926	238452250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
WTC11_00052153	chr2	+	1553	3	FSM	ENSG00000188542.10	ENST00000343217.6	1555	3	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCTTTGGTAAACTG	240560043	False	NA	10	True	AATAAA	-18	NA	240560055	240564014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240561078_240561329_240561520_240563673
WTC11_00052154	chr2	+	4648	2	FSM	ENSG00000188542.10	ENST00000405954.2	4648	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTCCAATACTCG	240560298	True	NA	NA	False	AGTAAA	-20	NA	240560356	240565256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240561078_240561329
WTC11_00052163	chr2	+	4430	9	FSM	ENSG00000142330.20	ENST00000494738.5	4406	9	-24	0	-24	0	multi-exon	FALSE	canonical	0	0	junction_6	74.7324394088672	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCAGTCTTGCTCCAGGT	240589831	False	NA	12	True	AATAAA	-21	NA	240589859	240599103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
WTC11_00052167	chr2	+	3821	1	FSM	ENSG00000178623.13	ENST00000438013.3	3821	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTAGTGGGGCCCTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	240627432	240631253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240627400_240631300
WTC11_00052169	chr2	+	981	9	FSM	ENSG00000115685.15	ENST00000438799.5	976	9	-5	0	-5	0	multi-exon	FALSE	canonical	1	8	junction_1	194.531127007993	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCTGGGTAAGTTTA	241149189	True	NA	NA	False	AATAGA	-41	NA	241149570	241169856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241149709_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780
WTC11_00052171	chr2	+	1009	9	FSM	ENSG00000115685.15	ENST00000404405.7	1009	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	187.659224060529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241150405	False	NA	18	True	AATAAA	-19	NA	241150417	241167174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158532_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
WTC11_00052173	chr2	+	978	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	-13	0	0	0	multi-exon	FALSE	canonical	3	275	junction_8	98.8610135493259	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147845	True	NA	18	True	AATAAA	-19	NA	241150466	241167174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
WTC11_00052174	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	116.152305292195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	241147845	True	NA	8	True	TATAAA	-18	NA	241150466	241183652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
WTC11_00052175	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.506673709776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147874	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
WTC11_00052176	chr2	+	1345	11	NIC	ENSG00000115685.15	novel	1941	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	184.783657286027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	241147879	True	NA	8	True	TATAAA	-18	NA	241150500	241183652	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646_241182817_241183378
WTC11_00052181	chr2	+	775	6	FSM	ENSG00000168385.18	ENST00000492978.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	2148.30180375105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGCAAAAGCTGACACT	241312761	True	NA	NA	False	AATACA	-24	NA	241315269	241337734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315611_241324215_241324242_241335125_241335213_241335974_241336099_241337381_241337517_241337672
WTC11_00052184	chr2	+	575	5	FSM	ENSG00000168385.18	ENST00000445030.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2038.34103807484	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAACATTCTTATGTTA	241312846	True	NA	6	True	NA	NA	NA	241315354	241335212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315611_241320202_241320288_241324215_241324242_241325992_241326114_241335125
WTC11_00052200	chr2	+	3275	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	-24	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	349.882797836965	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288631	True	NA	NA	False	AATAAA	-23	NA	241315900	241354027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
WTC11_00052201	chr2	+	3356	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	-23	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1520.35177337118	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288635	True	NA	NA	False	AATAAA	-23	NA	241315904	241354027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
WTC11_00052214	chr2	+	7136	13	ISM	ENSG00000006607.14	ENST00000627550.2	2122	18	-8	18629	-4	0	5prime_fragment	FALSE	canonical	3	36	junction_4	9.32849577013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTTTAGCTTTCTTT	241353168	True	NA	17	True	AATAAA	-31	NA	241356280	241447149	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303
WTC11_00052218	chr2	+	3273	6	FSM	ENSG00000006607.14	ENST00000470617.1	3273	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	1.49666295470958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATTCTCCTCTGCCT	NA	False	NA	9	True	AATAAA	-17	NA	241488147	241494840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
WTC11_00052220	chr2	+	2505	8	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	42	junction_5	56.8223152485367	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556083	True	NA	38	True	AATAAA	-28	NA	241558744	241574131	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296_241572813_241572853_241573016_241573055_241573137_241573176
WTC11_00052227	chr2	+	2388	12	FSM	ENSG00000168397.17	ENST00000494465.5	2365	12	-23	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	265.67080232237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATTAAAGTCCTGTTT	241626195	True	NA	-17	True	NA	NA	NA	241637611	241672599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
WTC11_00052228	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	196.745376198668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	241626195	True	NA	12	True	ATTAAA	-19	NA	241637611	241672628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
WTC11_00052230	chr2	+	2419	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	-5	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	212.914823866781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	241626276	True	NA	15	True	ATTAAA	-22	NA	241637692	241672631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
WTC11_00052231	chr2	+	2820	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	-31	8	0	0	multi-exon	FALSE	canonical	3	532	junction_12	86.483941990535	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACCTTGTGTCTAT	241626245	True	NA	84	True	NA	NA	NA	241637661	241673849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
WTC11_00052233	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	106.161433675323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	241626276	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
WTC11_00052238	chr2	+	1563	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	3	0	3	0	multi-exon	FALSE	canonical	3	139	junction_2	213.441248746972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-24	True	NA	NA	NA	241651009	241672592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
WTC11_00052254	chr2	+	2298	3	FSM	ENSG00000180902.18	ENST00000468064.5	2298	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTCTTTGCTTCTGTTA	241754509	False	NA	17	True	AGTAAA	-19	NA	241754520	241768811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241754747_241755044_241756015_241767709
WTC11_00052256	chr2	+	3638	1	FSM	ENSG00000280119.1	ENST00000625132.1	4805	1	1137	30	1137	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATAAATGTATTTCTC	NA	False	NA	-24	True	NA	NA	NA	242002345	242005983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_242002300_242006000
WTC11_00052258	chr2	-	4158	2	FSM	ENSG00000184731.6	ENST00000327669.5	3880	2	-278	0	87	0	multi-exon	FALSE	canonical	3	28	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-46604	False	NA	-4	True	AATAAA	-21	NA	46783	38813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41628_45439
WTC11_00052259	chr2	-	3941	3	NNC	ENSG00000184731.6	novel	3880	2	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-46623	False	NA	-4	True	AATAAA	-21	NA	46802	38813	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_41628_45439_46512_46747
WTC11_00052260	chr2	-	1752	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	-8	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.6822018558765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264013	False	1235	0	True	AATAAA	-33	NA	264032	218135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
WTC11_00052261	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	58.102146044703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264013	False	1235	0	True	AATAAA	-33	NA	264032	218135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
WTC11_00052262	chr2	-	2012	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	-13	0	0	multi-exon	FALSE	canonical	3	25	junction_1	76.9845262630785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264373	False	NA	0	True	AATAAA	-33	NA	264392	218135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
WTC11_00052270	chr2	-	895	5	ISM	ENSG00000189292.16	ENST00000403610.9	1184	6	404	5	0	-5	3prime_fragment	FALSE	canonical	3	19	junction_1	10.4970233876085	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTAGTCTTCAAAGTG	-287668	False	NA	-4	True	AATAAA	-29	NA	287687	279562	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582
WTC11_00052271	chr2	-	1401	6	NIC	ENSG00000189292.16	novel	809	5	NA	NA	-5	-5	intron_retention	FALSE	canonical	2	5	junction_5	15.2052622469986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTAGTCTTCAAAGTG	-288837	False	NA	-4	True	AATAAA	-29	NA	288856	279562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582_287893_288552
WTC11_00052273	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	32.4913450014	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	-673805	True	NA	2	True	AATAAA	-32	NA	677406	663876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
WTC11_00052274	chr2	-	2690	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	-118	0	-118	0	multi-exon	FALSE	canonical	3	27	junction_4	124.764418004494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	NA	False	NA	NA	False	ATTAAA	-20	NA	677524	667972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
WTC11_00052275	chr2	-	1698	2	FSM	ENSG00000151353.15	ENST00000497508.1	1706	2	8	0	8	0	multi-exon	FALSE	canonical	3	282	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGCTGTGTTTTCTAGT	-667366	False	NA	0	True	AATAAA	-36	NA	670967	669188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756
WTC11_00052276	chr2	-	1789	4	FSM	ENSG00000151353.15	ENST00000477202.1	1767	4	0	-22	0	0	multi-exon	FALSE	canonical	3	265	junction_3	13.0724477007517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGCTGTGTTTTCTAGT	-673061	False	NA	0	True	AATAAA	-36	NA	676662	669188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509
WTC11_00052280	chr2	-	825	3	NNC	ENSG00000235688.3	novel	869	3	NA	NA	109	25890	intron_retention	FALSE	non_canonical	0	0	junction_1	9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAATAATGAAGTCCTC	-950529	False	NA	NA	False	NA	NA	NA	950594	923366	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_923393_949634_950387_950547
WTC11_00052281	chr2	-	1401	2	ISM	ENSG00000235688.3	ENST00000456949.3	869	3	-282	-89	-282	89	intron_retention	FALSE	canonical	3	77	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCACCTTCACGGCAGT	-950982	False	NA	83	True	NA	NA	NA	951047	949537	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_949802_949910
WTC11_00052282	chr2	-	792	2	FSM	ENSG00000235688.3	ENST00000684906.1	1348	2	186	370	186	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-951251	False	NA	-6	True	AATAAA	-29	NA	951316	949626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_950387_951284
WTC11_00052283	chr2	-	6694	23	NNC	ENSG00000130508.11	novel	6817	23	NA	NA	0	52867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.440603863341	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTTTTCCTATGTGAT	-1744426	False	NA	NA	False	NA	NA	NA	1744442	1579019	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_1579046_1631890_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
WTC11_00052284	chr2	-	6838	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	-21	0	21	multi-exon	FALSE	canonical	3	289	junction_19	72.8008718501967	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAACCAGTACATGAGG	-1727494	True	NA	20	True	AATAAA	-43	NA	1744515	1631865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
WTC11_00052285	chr2	-	720	7	FSM	ENSG00000130508.11	ENST00000425171.1	720	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	95.1608287759903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGAGCCCCAGGACGCA	-1727481	True	NA	NA	False	AAAAAG	-41	NA	1744502	1677029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
WTC11_00052286	chr2	-	1658	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	-1	0	1	multi-exon	FALSE	canonical	3	149	junction_6	12.5343278639104	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTCGGCTCATTCTTT	-3375882	True	NA	-4	True	AATAAA	-18	NA	3377818	3188968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
WTC11_00052288	chr2	-	4290	1	Genic_Genomic	ENSG00000225234.1	novel	NA	NA	NA	NA	-2685	437	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGTCTAGCTGGAGCC	NA	False	NA	NA	False	NA	NA	NA	3485094	3480804	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_3480800_3485100
WTC11_00052289	chr2	-	2192	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	-11	0	11	multi-exon	FALSE	canonical	3	588	junction_3	17.9876500843094	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGACAAATGCAGCATGA	-3511600	True	NA	NA	False	AATAAA	-27	NA	3519531	3497354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
WTC11_00052290	chr2	-	3963	4	FSM	ENSG00000182551.14	ENST00000382093.5	3870	4	-93	0	-93	0	multi-exon	FALSE	canonical	3	20	junction_3	278.516706061873	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGGCTTGGAGTTAC	-3509909	False	NA	-32	True	AATAAA	-19	NA	3517840	3498452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3514807
WTC11_00052291	chr2	-	2762	12	FSM	ENSG00000286905.1	ENST00000658393.1	2742	12	0	-20	0	18	multi-exon	TRUE	canonical	2	2	junction_3	201.19925570406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTATGTCGCAGTGTTCG	-3548688	True	NA	-5	True	AATAAA	-19	NA	3558304	3531989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107_3534256_3536197_3536314_3536723_3536912_3545700_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
WTC11_00052292	chr2	-	2675	11	FSM	ENSG00000286905.1	ENST00000654051.1	2657	11	0	-18	0	18	multi-exon	FALSE	canonical	2	5	junction_1	190.527688276534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTATGTCGCAGTGTTCG	-3548717	True	NA	-5	True	AATAAA	-19	NA	3558333	3531989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107_3534256_3536723_3536912_3545700_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
WTC11_00052293	chr2	-	5310	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	-19	-2	-19	2	multi-exon	FALSE	canonical	3	391	junction_6	19.1439232112534	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGTCTTTGTCTTCTGT	-3548736	True	NA	1	True	AATAAA	-35	NA	3558352	3541427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
WTC11_00052296	chr2	-	3862	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	-137	-25	-137	25	multi-exon	TRUE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATTCTTTTCTTTA	-3575034	True	NA	NA	False	AATAAA	-41	NA	3575237	3568479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3571239_3574134
WTC11_00052297	chr2	-	279	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATAATGTTGAAGTGTT	NA	False	NA	NA	False	AATAAA	-2	NA	5006525	5006246	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_5006200_5006500
WTC11_00052298	chr2	-	7308	29	NIC	ENSG00000134313.17	novel	7348	30	NA	NA	25	59	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	18.416766706411	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAGAAGTGTTCTGAAC	-8834395	True	NA	50	True	NA	NA	NA	8837571	8728798	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
WTC11_00052299	chr2	-	4084	28	FSM	ENSG00000134313.17	ENST00000489024.5	4084	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	32.8566324969523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAATTCCCAGGATTC	-8834436	True	NA	NA	False	NA	NA	NA	8837612	8731952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812497_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
WTC11_00052302	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	17.1535143791456	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	-9002872	True	NA	1	True	ATTAAA	-17	NA	9003684	8852689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
WTC11_00052303	chr2	-	416	3	FSM	ENSG00000143797.12	ENST00000486315.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACTCAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8862476	8858846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8858905_8860612_8860765_8862270
WTC11_00052304	chr2	-	525	3	FSM	ENSG00000143797.12	ENST00000494760.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATTTTCTGAAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	8868508	8862325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8862723_8864169_8864235_8868445
WTC11_00052305	chr2	-	754	6	FSM	ENSG00000143797.12	ENST00000477073.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	46.6793316147522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAACATGTAAATAGA	-9002897	True	NA	NA	False	NA	NA	NA	9003709	8873107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_9003539
WTC11_00052308	chr2	-	1692	9	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	55	junction_1	119.007812243567	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9420426	True	NA	-18	True	AATAAA	-2	NA	9423500	9405683	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406159_9406214_9406327_9406494_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
WTC11_00052309	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	143.157968977045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9423187	False	3074	NA	False	TATAAA	-23	NA	9423229	9403474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
WTC11_00052310	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	103.148436730762	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9420432	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
WTC11_00052311	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	41.1933112154011	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9420454	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
WTC11_00052316	chr2	-	873	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	-12	0	0	multi-exon	FALSE	canonical	3	36	junction_4	117.505063720675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-9420426	True	NA	NA	False	ATTAAA	-34	NA	9423500	9406647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
WTC11_00052317	chr2	-	1544	7	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	114.118968138031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTCTCAATGAAGTCAT	-9423167	False	3074	NA	False	ATTAAA	-23	NA	9423209	9406658	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
WTC11_00052318	chr2	-	865	7	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	137.791710765037	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9420369	True	NA	NA	False	ATTAAA	-22	NA	9423443	9406659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406906_9407448_9407585_9408112_9408202_9412268_9412406_9414177_9414257_9418625_9418733_9423372
WTC11_00052319	chr2	-	739	6	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	157.219082811216	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTAACTCTCAATGAAG	-9423381	False	NA	NA	False	ATTAAA	-19	NA	9423423	9406662	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406906_9407448_9407585_9408112_9408206_9412268_9412406_9414177_9414257_9423372
WTC11_00052326	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	13.3592341023903	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	-9552378	True	NA	-32	True	AATAAA	-17	NA	9555830	9488485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
WTC11_00052327	chr2	-	467	3	FSM	ENSG00000151694.14	ENST00000649798.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAGCACAGACTCACAT	-9493140	False	NA	NA	False	NA	NA	NA	9493153	9490358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9490519_9491100_9491152_9492897
WTC11_00052328	chr2	-	491	3	FSM	ENSG00000151694.14	ENST00000649068.1	501	3	0	10	0	-10	multi-exon	FALSE	canonical	3	130	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATCCAAGCCGAGGAT	NA	False	NA	NA	False	NA	NA	NA	9505318	9497014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9497249_9502172_9502277_9505165
WTC11_00052329	chr2	-	888	5	FSM	ENSG00000151694.14	ENST00000478059.1	1073	5	0	185	0	-185	multi-exon	FALSE	canonical	3	115	junction_3	9.54921462739214	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATAGTATTTGGCATG	-9552322	True	NA	NA	False	NA	NA	NA	9555774	9527685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
WTC11_00052330	chr2	-	2265	7	NNC	ENSG00000134308.14	novel	2196	6	NA	NA	-56	7632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1349.69276339305	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACATTTTTCTTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	9631053	9576334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9576360_9583978_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
WTC11_00052331	chr2	-	2296	7	NNC	ENSG00000134308.14	novel	2196	6	NA	NA	-78	7632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1349.69276339305	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACATTTTTCTTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	9631075	9576334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9576360_9583969_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
WTC11_00052332	chr2	-	2204	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	-8	0	8	multi-exon	FALSE	canonical	3	2340	junction_5	553.350015812777	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCCTTGGCTGTT	-9593653	True	NA	-9	True	AATAAA	-37	NA	9630997	9583958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
WTC11_00052333	chr2	-	2229	5	FSM	ENSG00000134308.14	ENST00000381844.8	2216	5	0	-13	0	8	multi-exon	FALSE	canonical	3	3338	junction_3	242.155941492254	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCCTTGGCTGTT	-9593272	False	NA	-9	True	AATAAA	-37	NA	9630616	9583958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158
WTC11_00052334	chr2	-	665	4	FSM	ENSG00000134308.14	ENST00000446619.1	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1569.24022663482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGCATTTGATATAAGCA	-9593602	False	NA	NA	False	NA	NA	NA	9630946	9588297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9588329_9591391_9591516_9630158_9630535_9630812
WTC11_00052335	chr2	-	1567	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	-1	6	-1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	-10040637	False	NA	-5	True	AATACA	-18	NA	10040664	10039097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10039100_10040700
WTC11_00052336	chr2	-	2570	3	FSM	ENSG00000205795.5	ENST00000381813.5	3045	3	168	307	168	-307	multi-exon	FALSE	canonical	2	5	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGCCGGCCCTGTCTCT	-10080217	True	NA	NA	False	AATAAA	-30	NA	10080243	10056779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10058959_10065903_10065957_10079905
WTC11_00052337	chr2	-	2082	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	0	30190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.05081826538	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGGCTCAGGAAGAGG	-10438501	True	NA	NA	False	NA	NA	NA	10448327	10409777	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10409808_10440391_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
WTC11_00052338	chr2	-	2309	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	-217	30190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.05081826538	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGGCTCAGGAAGAGG	-10448529	False	NA	NA	False	NA	NA	NA	10448544	10409777	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10409808_10440381_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
WTC11_00052339	chr2	-	2259	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	217	0	-217	multi-exon	FALSE	canonical	3	425	junction_7	43.4537847023556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCAGAGCCTCTGGTGG	-10438501	True	NA	NA	False	NA	NA	NA	10448327	10440184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
WTC11_00052341	chr2	-	3349	20	FSM	ENSG00000115761.16	ENST00000345985.7	3333	20	0	-16	0	4	multi-exon	FALSE	canonical	2	5	junction_10	64.4134412428212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCCAAGAAAATTTTTTT	-10683076	True	NA	NA	False	AATAAA	-33	NA	10689972	10570749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
WTC11_00052342	chr2	-	3502	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	-4	0	4	multi-exon	FALSE	canonical	3	224	junction_3	29.5030083211865	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCCAAGAAAATTTTTTT	-10683079	True	NA	NA	False	AATAAA	-33	NA	10689975	10570749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
WTC11_00052343	chr2	-	2558	20	NIC	ENSG00000115761.16	novel	3498	21	NA	NA	1	-876	combination_of_known_junctions	FALSE	canonical	2	3	junction_19	62.8887687104534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTCTGTGTATTGCC	-10683075	True	NA	-5	True	ATTAAA	-28	NA	10689971	10571643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10689795
WTC11_00052345	chr2	-	2284	14	NNC	ENSG00000143870.13	novel	2509	14	NA	NA	0	26396	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2183.76211668041	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTCAAGAGGGAAAACT	-10739276	True	NA	NA	False	AAAAAG	-9	NA	10812754	10756994	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10757034_10783393_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
WTC11_00052346	chr2	-	2285	14	NNC	ENSG00000143870.13	novel	2509	14	NA	NA	0	26398	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2183.76211668041	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAAGAGGGAAAACTAT	-10739276	True	NA	NA	False	AAAAAG	-11	NA	10812754	10756992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10757033_10783393_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
WTC11_00052347	chr2	-	2292	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	-13	0	13	multi-exon	FALSE	canonical	3	7263	junction_3	518.508832829511	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCTGAAAAAGATCTTA	-10739307	True	NA	-8	True	AATAAA	-29	NA	10812785	10783377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
WTC11_00052348	chr2	-	2524	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	-15	0	13	multi-exon	FALSE	canonical	3	14	junction_13	2887.87812606521	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCTGAAAAAGATCTTA	-10739361	True	NA	-8	True	AATAAA	-29	NA	10812839	10783377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
WTC11_00052349	chr2	-	8347	33	FSM	ENSG00000134318.15	ENST00000315872.11	8345	33	0	-2	0	2	multi-exon	FALSE	canonical	1	29	junction_22	30.2073563060391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCTGTGAAATAGTCC	-11342068	True	NA	1	True	AATAAA	-33	NA	11344636	11179756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11183441_11192147_11192362_11192450_11192713_11193778_11193858_11194255_11194345_11194954_11195026_11197179_11197349_11197525_11197706_11198490_11198586_11198680_11198775_11200956_11201144_11201309_11201414_11202051_11202122_11207725_11207911_11208286_11208448_11211680_11211841_11214356_11214464_11214839_11215087_11215320_11215413_11215509_11215646_11216157_11216207_11217089_11217170_11218454_11218467_11218965_11219027_11221197_11221358_11222082_11222175_11224321_11224461_11227253_11227399_11235701_11235963_11249660_11249799_11286538_11286640_11287654_11287737_11343995
WTC11_00052350	chr2	-	3225	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	52.035244466291	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATCTTCTGGCGTTGGG	-11462850	True	NA	-5	True	TATAAA	-20	NA	11466161	11444379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
WTC11_00052351	chr2	-	3429	9	FSM	ENSG00000169016.17	ENST00000542100.5	3450	9	2	19	2	-19	multi-exon	FALSE	canonical	0	0	junction_3	61.5293375147173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTCGAGTCACTCCAT	-11462864	True	NA	-19	True	TATAAA	-6	NA	11466175	11444393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
WTC11_00052352	chr2	-	3186	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	66.8538704937867	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATCTTCTGGCGTTGGG	-11462866	True	NA	-5	True	TATAAA	-20	NA	11466177	11444379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
WTC11_00052354	chr2	-	692	3	FSM	ENSG00000151779.13	ENST00000433283.5	687	3	0	-5	0	3	multi-exon	FALSE	canonical	2	20	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCCGCTTTTTTAACC	NA	False	NA	-16	True	AATAAA	-21	NA	15190403	15166910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15167324_15186741_15186881_15190263
WTC11_00052355	chr2	-	7280	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	3	-5	3	3	multi-exon	FALSE	canonical	3	59	junction_32	25.8502177214738	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCCGCTTTTTTAACC	-15559475	True	NA	-16	True	AATAAA	-21	NA	15561331	15166910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
WTC11_00052356	chr2	-	769	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	1	6	-1	multi-exon	FALSE	canonical	3	11	junction_2	6	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGGTGGCGCCGCGGTGG	NA	False	NA	NA	False	AATAAA	-22	NA	15941723	15939898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15940352_15940973_15941098_15941531
WTC11_00052357	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	-15941022	False	216	NA	False	NA	NA	NA	15941238	15940120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15940352_15940973
WTC11_00052358	chr2	-	654	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	10	-22	10	22	multi-exon	FALSE	canonical	2	4	junction_1	4.49691252107735	587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGTCGTATTTTAAA	-16105673	True	NA	NA	False	NA	NA	NA	16105831	16085199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
WTC11_00052359	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.0849462361281	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-16665068	True	NA	-3	True	ATTAAA	-23	NA	16665834	16549458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
WTC11_00052360	chr2	-	576	3	FSM	ENSG00000197872.11	ENST00000469507.1	557	3	0	-19	0	19	multi-exon	FALSE	canonical	3	66	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTTGACATGATAAGA	NA	False	NA	NA	False	TATAAA	-3	NA	16561482	16560637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16561070_16561160_16561278_16561455
WTC11_00052361	chr2	-	5660	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	-420	0	420	multi-exon	FALSE	canonical	3	34	junction_26	66.8155949695769	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAATGTTTAAATTCTG	-17747576	True	NA	94	True	NA	NA	NA	17753810	17663391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
WTC11_00052362	chr2	-	5988	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	57	-872	0	872	multi-exon	TRUE	canonical	3	176	junction_26	38.8074635961851	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAATATTGATAGTTAG	-17747539	True	NA	-5	True	AATAAA	-14	NA	17753773	17662939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
WTC11_00052365	chr2	-	443	1	FSM	ENSG00000260331.1	ENST00000565944.1	819	1	54	322	54	-322	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTATTGTACAGCAGA	-18548136	False	NA	NA	False	TTTAAA	-27	NA	18548150	18547707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18547700_18548200
WTC11_00052366	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	-18558778	True	NA	-6	True	AATAAA	-22	NA	18560653	18554722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18555809_18560179
WTC11_00052367	chr2	-	737	2	FSM	ENSG00000240857.2	ENST00000468071.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAACTTGTTACTTGAA	-18560619	False	NA	NA	False	TATAAA	-41	NA	18560679	18555121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18555809_18560629
WTC11_00052368	chr2	-	2109	2	FSM	ENSG00000183891.6	ENST00000495698.1	710	2	-999	-400	-999	5	multi-exon	FALSE	canonical	3	177	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTGTGCCACATT	-19899366	False	NA	3	True	AATAAA	-23	NA	19899476	19896625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19897127_19897868
WTC11_00052369	chr2	-	887	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-53	5	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTGTGCCACATT	-19900251	True	NA	3	True	AATAAA	-23	NA	19901694	19896625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_19897127_19897868_19898036_19901475
WTC11_00052370	chr2	-	942	3	FSM	ENSG00000183891.6	ENST00000333610.4	941	3	4	-5	4	5	multi-exon	FALSE	canonical	3	29	junction_2	74	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTGTGCCACATT	-19901869	True	NA	3	True	AATAAA	-23	NA	19901979	19896625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19897127_19897868_19898036_19901705
WTC11_00052371	chr2	-	831	2	FSM	ENSG00000183891.6	ENST00000431392.1	779	2	-52	0	-52	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTTTTTTTCTTTT	-19900250	True	NA	NA	False	NA	NA	NA	19901693	19897868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19898036_19901029
WTC11_00052372	chr2	-	6901	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	-3	0	3	multi-exon	TRUE	canonical	3	81	junction_6	16.3887679822594	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATTCCACGTTT	-19987248	True	NA	2	True	AATAAA	-19	NA	19990105	19910259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
WTC11_00052374	chr2	-	1388	8	NNC	ENSG00000068697.7	novel	1365	7	NA	NA	0	79868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1207.06914398776	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTGAGTATGCGAATT	-20025240	True	NA	NA	False	NA	NA	NA	20051628	19952781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_19952808_20032652_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
WTC11_00052375	chr2	-	1447	8	NNC	ENSG00000068697.7	novel	1365	7	NA	NA	-59	79868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1207.06914398776	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTGAGTATGCGAATT	-20025299	True	NA	NA	False	NA	NA	NA	20051687	19952781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_19952807_20032651_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
WTC11_00052377	chr2	-	2069	3	ISM	ENSG00000132031.13	ENST00000407540.8	2557	8	14626	66	-189	-66	3prime_fragment	FALSE	canonical	3	95	junction_1	11	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTATCATGTCTATTT	NA	False	NA	-8	True	AATAAA	-14	NA	19998042	19992117	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_19993167_19994298_19994410_19997133
WTC11_00052378	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3000	junction_3	260.065002558121	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-20025240	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
WTC11_00052380	chr2	-	3167	5	FSM	ENSG00000115884.11	ENST00000254351.9	3165	5	0	-2	0	2	multi-exon	FALSE	canonical	3	169	junction_4	26.2011450131478	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTGGTGGTGGTTGA	-20220943	True	NA	-6	True	AATAAA	-25	NA	20225130	20200794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801
WTC11_00052381	chr2	-	3590	6	FSM	ENSG00000115884.11	ENST00000381150.5	3291	6	-299	0	-299	0	multi-exon	FALSE	canonical	1	8	junction_5	85.2830581065196	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTGCTGTGGTGGTGG	-20225604	True	NA	-10	True	AATAAA	-21	NA	20225732	20200798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801_20225087_20225261
WTC11_00052383	chr2	-	6542	22	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	0	69	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_20	158.882192269644	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCTGTTCTGGAGCCA	-20347726	True	NA	59	True	AAGAAA	-19	NA	20350834	20248621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20326260_20326386_20327309_20327379_20350596
WTC11_00052385	chr2	-	4967	8	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	47921	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_5	125.986069848688	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	NA	False	NA	-10	True	AATAAA	-1	NA	20264335	20248736	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192
WTC11_00052386	chr2	-	6217	21	NIC	ENSG00000055917.16	novel	6309	21	NA	NA	7	-9	combination_of_known_junctions	FALSE	canonical	2	11	junction_19	162.669941906918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCTCAGTTATAACTTA	-20347719	True	NA	-19	True	AATAAA	-38	NA	20350827	20248699	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20326260_20326386_20327309_20327379_20350596
WTC11_00052388	chr2	-	6559	24	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	158.905935723992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20350551	False	NA	-10	True	AATAAA	-1	NA	20350645	20248736	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20326260_20326386_20327309_20327379_20331716_20331938_20332966_20333064_20350596
WTC11_00052389	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_20	151.933735555998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20347736	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
WTC11_00052390	chr2	-	4352	17	FSM	ENSG00000055917.16	ENST00000440577.5	4352	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	161.414451025923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	-20312216	True	NA	-24	True	ATTAAA	-17	NA	20312256	20249863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235
WTC11_00052392	chr2	-	564	1	FSM	ENSG00000279307.2	ENST00000624084.2	510	1	-9	-45	-9	45	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGCAAATAAAAGAAGTGAA	NA	False	NA	NA	False	AATGAA	-45	NA	20529985	20529421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20529400_20530000
WTC11_00052394	chr2	-	1691	3	ISM	ENSG00000118960.13	ENST00000304031.8	2383	7	26234	6	28	-6	3prime_fragment	FALSE	canonical	3	31	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTTTCTTGGATAT	NA	False	NA	-20	True	AATAAA	-13	NA	20624864	20617823	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_20619246_20623895_20624032_20624731
WTC11_00052396	chr2	-	3927	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	7	-17	-5	0	multi-exon	FALSE	canonical	3	84	junction_5	9.322910847298	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820485	True	NA	0	True	TTTAAA	-24	NA	20823094	20684013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
WTC11_00052401	chr2	-	8112	28	FSM	ENSG00000119778.15	ENST00000238789.10	8112	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	11.3305491617693	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCTTAATT	-23926352	True	NA	NA	False	AATAAA	-17	NA	23927123	23748663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786026_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
WTC11_00052402	chr2	-	3859	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	-11	0	11	multi-exon	FALSE	canonical	3	128	junction_1	19.2584757675391	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGTTTTGGTAGTATT	-24045481	True	NA	-4	True	AATAAA	-26	NA	24047391	24029335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
WTC11_00052405	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	73.9233837609363	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	-24058901	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
WTC11_00052406	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	-24058948	True	NA	NA	False	AATAAA	-7	NA	24076373	24073648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24074195_24076199
WTC11_00052407	chr2	-	1653	5	FSM	ENSG00000115129.14	ENST00000238721.9	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	20.7484939212464	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082971	True	NA	-7	True	AATAAA	-14	NA	24084834	24077432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188
WTC11_00052408	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	48.4916487655349	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24085205	False	NA	-7	True	AATAAA	-14	NA	24085215	24077432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
WTC11_00052409	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24084301	False	NA	0	True	AATAAA	-22	NA	24084311	24080745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24081032_24082884_24083153_24084188
WTC11_00052410	chr2	-	5814	39	FSM	ENSG00000198399.16	ENST00000361999.7	5814	39	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_3	11.8293498555728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTCAAAGTCTGACTGA	-24360296	False	1916	-4	True	AATAAA	-22	NA	24360309	24202863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24203784_24204244_24204419_24205213_24205298_24208236_24208320_24209099_24209222_24209817_24210034_24210779_24210948_24212649_24212749_24216048_24216233_24217906_24218014_24220944_24221067_24246128_24246321_24246796_24246894_24248628_24248751_24248836_24248883_24252344_24252512_24254366_24254432_24257887_24258094_24261105_24261251_24261560_24261743_24270670_24270769_24271765_24271942_24275712_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
WTC11_00052411	chr2	-	708	2	FSM	ENSG00000198399.16	ENST00000478720.1	2035	2	396	931	396	-513	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCACCAGATTTCCTGG	NA	False	NA	NA	False	TATAAA	-28	NA	24205297	24203794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24204419_24205213
WTC11_00052412	chr2	-	729	4	FSM	ENSG00000198399.16	ENST00000479575.1	749	4	20	0	20	0	multi-exon	FALSE	canonical	3	20	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGCATGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	24210309	24205265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24205298_24208236_24208320_24209099_24209222_24209817
WTC11_00052413	chr2	-	3634	4	FSM	ENSG00000198399.16	ENST00000416160.1	3634	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.7627931460511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTATTGTGTATTTC	NA	False	NA	-2	True	ATTAAA	-16	NA	24248699	24238932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628
WTC11_00052414	chr2	-	7249	29	NIC	ENSG00000198399.16	novel	2066	17	NA	NA	-213	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	9.33633181912118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTATTGTGTATTTC	-24360388	True	NA	-2	True	ATTAAA	-16	NA	24360749	24238932	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628_24248751_24248836_24248883_24252344_24252512_24254366_24254432_24257887_24258094_24261105_24261251_24261560_24261743_24270670_24270769_24271765_24271942_24275712_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
WTC11_00052415	chr2	-	1124	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	28	-32	28	32	multi-exon	FALSE	canonical	3	1200	junction_1	0	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGCCTCTCATTTTG	-24786478	True	NA	33	True	NA	NA	NA	24793363	24789695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24790582_24793125
WTC11_00052416	chr2	-	573	2	FSM	ENSG00000184924.6	ENST00000467797.1	424	2	-149	0	-149	0	multi-exon	FALSE	canonical	2	6	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTTATTAATAAGTTC	-24784870	False	NA	NA	False	ATTAAA	-19	NA	24791755	24790262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24790582_24791501
WTC11_00052417	chr2	-	5050	21	FSM	ENSG00000138031.15	ENST00000260600.9	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_20	14.5632242309181	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	-24919665	False	NA	0	True	ATTAAA	-20	NA	24919839	24819168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312
WTC11_00052419	chr2	-	3139	19	FSM	ENSG00000138031.15	ENST00000606682.5	3136	19	0	-3	0	0	multi-exon	FALSE	canonical	3	6	junction_16	38.2466007526918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	24841636	24819168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828024_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24838846_24838913_24839872_24840032_24841258_24841387_24841555
WTC11_00052420	chr2	-	4198	21	FSM	ENSG00000138031.15	ENST00000405392.6	4182	21	0	-16	0	0	multi-exon	FALSE	canonical	2	5	junction_7	25.8763888516153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGATTGTGGAAATTCT	-24918813	False	NA	-3	True	ATTAAA	-17	NA	24918987	24819171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826130_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312
WTC11_00052421	chr2	-	397	3	FSM	ENSG00000138031.15	ENST00000498288.1	887	3	-55	545	-55	332	multi-exon	TRUE	canonical	3	15	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCAAACCGGAAGGGAG	-24820839	False	NA	NA	False	NA	NA	NA	24820851	24819913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820383_24820452_24820723
WTC11_00052422	chr2	-	1002	4	FSM	ENSG00000138031.15	ENST00000485887.1	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	14.0554457615387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGGAGTGTCCCGTA	-24823351	False	NA	NA	False	NA	NA	NA	24823363	24820245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820849_24821516_24821641_24822510_24822631_24823208
WTC11_00052423	chr2	-	1801	8	FSM	ENSG00000138031.15	ENST00000435135.5	1801	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	36.3705420159036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAACGGGAGTGCCCAC	-24919665	False	NA	NA	False	NA	NA	NA	24919839	24836981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24918312_24919185_24919682
WTC11_00052424	chr2	-	485	3	FSM	ENSG00000115137.12	ENST00000492985.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATTACATT	-24971656	False	NA	NA	False	NA	NA	NA	24971859	24963114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24963475_24967210_24967294_24971817
WTC11_00052425	chr2	-	1186	3	FSM	ENSG00000115138.11	ENST00000395826.7	1128	3	-111	53	-1	2	multi-exon	FALSE	canonical	3	46	junction_2	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTTTGAATGTAAACT	-25168665	False	NA	-4	True	AATAAA	-24	NA	25168691	25160912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25161753_25164640_25164793_25168497
WTC11_00052427	chr2	-	1426	3	FSM	ENSG00000115138.11	ENST00000405623.5	1426	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	29	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGACTTTGAATGTAAA	NA	False	NA	-6	True	AATAAA	-22	NA	25168903	25160914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25161753_25164640_25164823_25168497
WTC11_00052430	chr2	-	9469	23	FSM	ENSG00000119772.19	ENST00000264709.7	9501	23	2	30	2	-11	multi-exon	FALSE	canonical	2	7	junction_22	195.292157700979	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAATGGAAAAGC	NA	False	NA	30	True	AATAAA	-17	NA	25342588	25227884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
WTC11_00052433	chr2	-	4478	24	FSM	ENSG00000119772.19	ENST00000380756.7	4477	24	0	-1	0	0	multi-exon	FALSE	canonical	2	7	junction_23	211.286508461485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	-25342229	True	NA	-22	True	AATAAA	-18	NA	25342489	25232975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25239314_25239514_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
WTC11_00052444	chr2	-	2461	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_16	66.5507949633159	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-24	True	AAAAAG	-5	NA	25673644	25377244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
WTC11_00052445	chr2	-	2275	19	FSM	ENSG00000138101.20	ENST00000407186.5	2275	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	73.1383772189555	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGCACCAAGCTCT	-25668263	True	NA	-37	True	NA	NA	NA	25673561	25377257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
WTC11_00052446	chr2	-	2310	19	NIC	ENSG00000138101.20	novel	2464	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	54.5720726297903	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	-25668249	True	NA	-24	True	AAAAAG	-5	NA	25673547	25377244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
WTC11_00052449	chr2	-	404	3	FSM	ENSG00000143970.18	ENST00000682588.1	413	3	9	0	-9	0	multi-exon	FALSE	canonical	2	2	junction_1	21	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGGAGGATTGCTTG	-25875861	True	NA	NA	False	NA	NA	NA	25878475	25844765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25844777_25845480_25845564_25878165
WTC11_00052450	chr2	-	492	1	FSM	ENSG00000218682.1	ENST00000403125.1	506	1	66	-52	66	52	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCTGAAATAAACACTGG	NA	False	NA	NA	False	NA	NA	NA	25856900	25856408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25856400_25856900
WTC11_00052451	chr2	-	5580	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	-228	-10	24	10	multi-exon	FALSE	canonical	3	159	junction_3	21.4675835355809	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTCTCTTCCCTTTGTT	-25981885	True	NA	-2	True	AATAAA	-31	NA	25982725	25926587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
WTC11_00052452	chr2	-	5577	8	NIC	ENSG00000084731.15	novel	5342	8	NA	NA	24	10	intron_retention	FALSE	canonical	3	37	junction_3	59.1894226623477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTCTCTTCCCTTTGTT	-25981885	True	NA	-2	True	AATAAA	-31	NA	25982725	25926587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25929072_25929304_25929478_25929954_25930061_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
WTC11_00052454	chr2	-	2849	4	FSM	ENSG00000084731.15	ENST00000475453.1	730	4	-2122	3	5	-3	multi-exon	FALSE	canonical	3	169	junction_2	23.9072281027215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGATGGGCCCACGTGC	-25982655	True	NA	NA	False	AATAAA	-15	NA	25982744	25954133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25954386_25955540_25955664_25956342_25956445_25980372
WTC11_00052455	chr2	-	204	1	Genic_Genomic	ENSG00000268412.2	novel	NA	NA	NA	NA	235	34	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTATTTTTGTTGAC	-26028364	False	NA	NA	False	NA	NA	NA	26028377	26028173	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_26028200_26028400
WTC11_00052456	chr2	-	3002	19	FSM	ENSG00000084754.12	ENST00000492433.2	2982	19	0	-20	0	0	multi-exon	FALSE	canonical	3	838	junction_10	69.195576287634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCATTGTGTGATCTT	-26231919	True	NA	-7	True	ATTAAA	-20	NA	26244604	26190634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
WTC11_00052457	chr2	-	2943	20	FSM	ENSG00000084754.12	ENST00000380649.8	2943	20	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_11	71.4999176723079	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCATTGTGTGATCTT	-26231947	True	NA	-7	True	ATTAAA	-20	NA	26244632	26190634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
WTC11_00052458	chr2	-	2158	19	FSM	ENSG00000084754.12	ENST00000646483.1	2158	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	242.051704761148	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTCATGCCTCGCTC	-26244585	False	NA	NA	False	NA	NA	NA	26244596	26191249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
WTC11_00052459	chr2	-	1255	9	FSM	ENSG00000084754.12	ENST00000471743.2	1485	9	0	230	0	-230	multi-exon	FALSE	canonical	2	3	junction_6	331.187612049424	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAGCTAAGTAAGAT	-26231922	True	NA	NA	False	NA	NA	NA	26244607	26212166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
WTC11_00052460	chr2	-	481	1	FSM	ENSG00000272148.1	ENST00000607659.1	480	1	96	-97	96	97	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAGAAACCCCGTCT	-27062801	False	NA	NA	False	NA	NA	NA	27062811	27062330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27062300_27062800
WTC11_00052461	chr2	-	575	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	-16	0	1	multi-exon	FALSE	canonical	3	4892	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGCGGAGGGAGGG	-27030250	True	NA	0	True	TATAAA	-31	NA	27071649	27070470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27070722_27071325
WTC11_00052463	chr2	-	1471	6	FSM	ENSG00000138028.17	ENST00000402550.5	1575	6	70	34	-15	-34	multi-exon	FALSE	canonical	1	2	junction_1	10.7219401229442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCAGAAGCATATTTTT	-27118822	True	NA	NA	False	NA	NA	NA	27119045	27098922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27099841_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
WTC11_00052464	chr2	-	1931	6	FSM	ENSG00000138028.17	ENST00000402394.6	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	7.22772439983706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTCACTCTAAAGC	-27118905	True	NA	-15	True	ATTAAA	-18	NA	27119128	27100593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
WTC11_00052465	chr2	-	1878	6	NNC	ENSG00000138028.17	novel	1610	7	NA	NA	-6355	192	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	8.28009661779378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCAGCTCAGGGCAGG	-27110869	False	NA	NA	False	NA	NA	NA	27111092	27100834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27110621
WTC11_00052466	chr2	-	1610	7	FSM	ENSG00000138028.17	ENST00000312734.8	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGCAGATTACCAATAAAG	-27118807	True	NA	-42	True	NA	NA	NA	27119030	27101112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27110672_27110969_27118845
WTC11_00052467	chr2	-	3054	6	FSM	ENSG00000138073.14	ENST00000468045.5	3057	6	0	3	0	-3	multi-exon	FALSE	canonical	3	551	junction_2	10.6470653233649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTACTCTTGTCAGCT	-27125343	True	NA	-6	True	AATAAA	-26	NA	27134629	27130758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27131509_27131671_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116
WTC11_00052468	chr2	-	2135	9	FSM	ENSG00000138073.14	ENST00000260643.7	2127	9	0	-8	0	8	multi-exon	FALSE	canonical	3	505	junction_7	27.8946119349239	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGCTGTTTCTGTCCT	-27125350	True	NA	5	True	AATAAA	-37	NA	27134636	27130747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
WTC11_00052475	chr2	-	3018	18	NNC	ENSG00000138074.15	novel	2230	18	NA	NA	0	51999	intron_retention	FALSE	non_canonical	0	0	junction_1	221.915957158386	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGGAAGGAAGG	-27209968	True	NA	NA	False	NA	NA	NA	27211793	27147587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27147616_27199587_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
WTC11_00052476	chr2	-	3044	18	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	-13	51999	intron_retention	FALSE	non_canonical	0	0	junction_1	214.097009348017	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGGAAGGAAGG	-27211903	False	1512	NA	False	NA	NA	NA	27211951	27147587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27147616_27199586_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
WTC11_00052477	chr2	-	3043	18	NNC	ENSG00000138074.15	novel	2230	18	NA	NA	-13	51999	intron_retention	FALSE	non_canonical	0	0	junction_1	214.097009348017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGGAAGGAAGG	-27211903	False	1512	NA	False	NA	NA	NA	27211951	27147587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27147616_27199587_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
WTC11_00052478	chr2	-	3112	18	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	7	51999	intron_retention	FALSE	non_canonical	0	0	junction_1	234.80306111431	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGGAAGGAAGG	-27212091	False	NA	NA	False	NA	NA	NA	27212139	27147587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27147616_27199586_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
WTC11_00052479	chr2	-	2307	3	FSM	ENSG00000138074.15	ENST00000461757.1	2307	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27203019	False	NA	0	True	AATAAA	-21	NA	27203049	27199586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27200580_27200997_27202075_27202812
WTC11_00052480	chr2	-	2994	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	12	0	intron_retention	FALSE	canonical	3	120	junction_16	166.0252239872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211692	False	NA	0	True	AATAAA	-21	NA	27211740	27199586	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
WTC11_00052481	chr2	-	3331	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	295	junction_16	126.030982673904	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGCTCCTGTACTGT	-27210756	True	NA	-2	True	AATAAA	-19	NA	27212268	27199588	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
WTC11_00052482	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_16	163.24464003452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27210756	True	NA	0	True	AATAAA	-21	NA	27212268	27199586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
WTC11_00052483	chr2	-	2990	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	229	junction_16	140.952216526559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGCTCCTGTACTGTC	-27209968	True	NA	-1	True	AATAAA	-20	NA	27211793	27199587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
WTC11_00052494	chr2	-	3139	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	-30	-173	-30	173	multi-exon	FALSE	canonical	3	23	junction_1	7.38448456189719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTGGTGTATGTCTG	-27262488	True	NA	NA	False	AATAAA	-14	NA	27263077	27253510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
WTC11_00052495	chr2	-	3199	3	FSM	ENSG00000115194.11	ENST00000482990.1	3447	3	248	0	248	0	multi-exon	FALSE	canonical	3	34	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTAAAAATTAGCT	-27257545	False	NA	NA	False	NA	NA	NA	27257572	27253846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27256521_27256787_27256894_27257153
WTC11_00052496	chr2	-	501	3	FSM	ENSG00000115194.11	ENST00000486309.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTTCGTCCGCCTGCT	-27259017	False	NA	NA	False	NA	NA	NA	27259044	27257996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27258059_27258160_27258308_27258752
WTC11_00052497	chr2	-	998	7	FSM	ENSG00000115204.15	ENST00000233545.6	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	66.4897652942834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27322554	False	NA	-5	True	ATTAAA	-15	NA	27322564	27309491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447
WTC11_00052498	chr2	-	906	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	195.197051434925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317876	True	NA	-5	True	ATTAAA	-15	NA	27323054	27309491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
WTC11_00052499	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_7	99.2995879309945	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317919	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
WTC11_00052501	chr2	-	915	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	-10	0	0	multi-exon	TRUE	canonical	3	43	junction_6	192.983873705043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	-27317905	True	NA	-43	True	NA	NA	NA	27323083	27309529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
WTC11_00052504	chr2	-	1731	14	Fusion	ENSG00000115211.17_ENSG00000115204.15	novel	1644	13	NA	NA	-62	30	multi-exon	FALSE	non_canonical	0	0	junction_1	187.378110282439	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGACACAGTGGCTCAC	-27361760	True	NA	NA	False	NA	NA	NA	27370400	27311042	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_27311075_27364358_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
WTC11_00052512	chr2	-	5644	19	FSM	ENSG00000115207.14_ENSG00000115204.15	ENST00000359541.6	3992	19	0	-1652	0	1652	multi-exon	FALSE	canonical	1	11	junction_18	105.078923894916	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTGCTTCCTTACTC	-27356476	False	NA	1	True	NA	NA	NA	27356492	27324196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
WTC11_00052513	chr2	-	5534	19	FSM	ENSG00000115207.14_ENSG00000115204.15	ENST00000264720.7	3882	19	0	-1652	0	1652	multi-exon	FALSE	canonical	3	233	junction_18	58.9556225656109	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTGCTTCCTTACTC	-27357018	True	NA	1	True	NA	NA	NA	27357034	27324196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
WTC11_00052515	chr2	-	4724	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	-771	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_19	119.778558377914	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTTTTACACGTCATG	NA	False	NA	-12	True	ATTAAA	-19	NA	27357805	27325853	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
WTC11_00052518	chr2	-	1860	11	ISM	ENSG00000115207.14	ENST00000359541.6	3992	19	12860	7756	-5373	2023	internal_fragment	FALSE	canonical	3	417	junction_4	37.4946662873535	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	-27343565	False	NA	-4	True	AATAAA	-32	NA	27343632	27333604	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307
WTC11_00052522	chr2	-	607	2	FSM	ENSG00000115211.17	ENST00000478311.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAACTCTGCTGCCTTTG	-27356442	False	NA	-6	True	AATAAA	-19	NA	27365082	27364357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717
WTC11_00052523	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	91.3665921804391	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27361698	True	NA	0	True	AATAAA	-25	NA	27370338	27364351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
WTC11_00052524	chr2	-	1710	13	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_11	189.9570675179	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27361771	True	NA	0	True	AATAAA	-25	NA	27370411	27364351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369920_27370283
WTC11_00052525	chr2	-	1778	13	NIC	ENSG00000115211.17	novel	1644	13	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_12	181.932279067423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAACTCTGCTGCCTTTG	-27361660	True	NA	-6	True	AATAAA	-19	NA	27370300	27364357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
WTC11_00052527	chr2	-	1631	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	-23	0	0	multi-exon	FALSE	canonical	3	300	junction_10	113.599687010523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAACTCTGCTGCCTTTG	-27361694	True	NA	-6	True	AATAAA	-19	NA	27370334	27364357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
WTC11_00052529	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	94.3593447964388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	-27361686	True	NA	-47	True	NA	NA	NA	27370326	27364398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
WTC11_00052533	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27380308	False	1719	-43	True	AATAAA	-16	NA	27380444	27377234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27378372_27378466_27379055_27380092
WTC11_00052534	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.2339898266013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27379015	True	NA	-43	True	AATAAA	-16	NA	27380734	27377234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
WTC11_00052538	chr2	-	5344	48	FSM	ENSG00000138002.16	ENST00000675690.1	5340	48	0	-4	0	4	multi-exon	TRUE	canonical	1	1	junction_33	15.8622693507038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACTGTATTCTTTGATC	-27488483	True	NA	-9	True	ATTAAA	-18	NA	27489754	27444372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745_27465883_27470927_27471030_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
WTC11_00052539	chr2	-	607	4	FSM	ENSG00000138002.16	ENST00000494163.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGGTTAGAGAGGAGGA	NA	False	NA	NA	False	AATAAA	-13	NA	27446196	27445019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27445106_27445295_27445450_27445744_27445844_27445928
WTC11_00052540	chr2	-	1680	11	FSM	ENSG00000138002.16	ENST00000674594.1	1685	11	0	5	0	-5	multi-exon	FALSE	canonical	3	62	junction_2	3.58329457343378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGAAGCCTACAGCACC	NA	False	NA	NA	False	NA	NA	NA	27450659	27445295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997
WTC11_00052543	chr2	-	653	2	FSM	ENSG00000138002.16	ENST00000489492.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	27466081	27465201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27465519_27465745
WTC11_00052544	chr2	-	3076	15	FSM	ENSG00000138002.16	ENST00000359466.10	2207	15	40	-909	0	3	multi-exon	FALSE	canonical	3	32	junction_8	6.70668262531743	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAACCATCCTTTTTC	-27488462	True	NA	-6	True	AATAAA	-21	NA	27489733	27470777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
WTC11_00052545	chr2	-	1856	16	FSM	ENSG00000138002.16	ENST00000511842.5	1832	16	0	-24	0	-8	multi-exon	FALSE	canonical	3	24	junction_1	8.04874041215284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCAGCCCCCAGAAC	-27488956	False	NA	-17	True	AATAAA	-10	NA	27489678	27470788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
WTC11_00052548	chr2	-	1614	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	-2	0	2	multi-exon	TRUE	canonical	3	153	junction_5	4.52462398683274	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTATAGTATGCTGAA	-27494478	True	NA	-2	True	AATAAA	-22	NA	27495200	27491880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
WTC11_00052550	chr2	-	2338	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	5	0	-5	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTACTGTTCCAATGT	-27628824	True	NA	-4	True	AATAAA	-17	NA	27629012	27625642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27627918_27628949
WTC11_00052553	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	36.5918023606381	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	-27660750	True	NA	-17	True	ATTAAA	-28	NA	27663614	27650808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
WTC11_00052554	chr2	-	2301	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	25	-46	0	35	multi-exon	FALSE	canonical	3	28	junction_4	65.9047797963092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCATTACTAATACCTA	-27660750	True	NA	31	True	NA	NA	NA	27663614	27653016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
WTC11_00052555	chr2	-	2903	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	1	-35	0	35	multi-exon	FALSE	canonical	3	143	junction_4	24.3567239176372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCATTACTAATACCTA	-27660775	True	NA	31	True	NA	NA	NA	27663639	27653016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
WTC11_00052558	chr2	-	1540	6	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	99	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	104.220919205311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867245	True	NA	NA	False	AATAAA	-20	NA	28870196	28849820	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28865016_28865120_28869578
WTC11_00052559	chr2	-	1826	7	NNC	ENSG00000171103.11	novel	1844	7	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	93.6352260399661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867321	True	NA	NA	False	AATAAA	-20	NA	28870272	28849820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869559
WTC11_00052560	chr2	-	1795	7	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	86.5917945817552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867336	True	NA	NA	False	AATAAA	-20	NA	28870287	28849820	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_28850243_28850327_28850406_28851098_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
WTC11_00052561	chr2	-	1841	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	3	0	3	0	multi-exon	FALSE	canonical	3	215	junction_5	32.3715409992584	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867355	True	NA	NA	False	AATAAA	-20	NA	28870306	28849820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
WTC11_00052563	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	7.06276525599035	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	-31138088	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
WTC11_00052564	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	33.0529877620768	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	-32010544	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
WTC11_00052565	chr2	-	1530	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	-14	0	14	multi-exon	FALSE	canonical	3	29	junction_9	72.5580227588009	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGCTCTGTGGTATAT	-32010995	False	NA	NA	False	AATAAA	-33	NA	32011008	31867808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
WTC11_00052567	chr2	-	682	4	FSM	ENSG00000162959.14	ENST00000407893.3	682	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	115.208024411882	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCAGAGTGCTATCTTT	-32010485	False	NA	NA	False	TTTAAA	-37	NA	32010498	31923515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31923735_31932066_31932136_31943301_31943384_32010186
WTC11_00052568	chr2	-	718	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	39	-234	0	213	multi-exon	FALSE	canonical	3	58	junction_2	776.395260160699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACACTTCCTCAGAGGT	-32019635	True	NA	-27	True	NA	NA	NA	32039754	32011672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00052569	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	802.208548667711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	-32019635	True	NA	-23	True	AATAAA	-11	NA	32039754	32011885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00052570	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1364	junction_4	171.680480835767	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	-32019686	True	NA	-31	True	AATAAA	-15	NA	32039805	32023904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00052572	chr2	-	682	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	25	5	25	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTGAATATGTAGCAC	-32165525	True	NA	NA	False	ATTAAA	-11	NA	32165732	32165050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32165000_32165700
WTC11_00052573	chr2	-	2758	9	NNC	ENSG00000119812.20	novel	2751	8	NA	NA	7	5179	intron_retention	FALSE	non_canonical	0	0	junction_1	257.218656982731	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTATATTCTCAAGCT	-33589391	True	NA	NA	False	NA	NA	NA	33599277	33547342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_33547372_33583659_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
WTC11_00052574	chr2	-	2756	9	NNC	ENSG00000119812.20	novel	2482	9	NA	NA	7	5179	intron_retention	FALSE	non_canonical	0	0	junction_1	257.218656982731	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTATATTCTCAAGCT	-33589391	True	NA	NA	False	NA	NA	NA	33599277	33547342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_33547374_33583663_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
WTC11_00052577	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	63.3165033134074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-33589413	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
WTC11_00052579	chr2	-	655	3	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-35	8237	-35	-6309	5prime_fragment	FALSE	canonical	3	747	junction_1	78	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGACGTGTGCACTGG	-33599348	True	NA	NA	False	AATAAA	-30	NA	33599382	33591922	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_33592215_33595488_33595638_33599168
WTC11_00052581	chr2	-	2014	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	-21	0	21	multi-exon	FALSE	canonical	3	20	junction_6	9.14508901330241	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGTTTTGTGTTGTA	-36595445	True	NA	1	True	AATAAA	-40	NA	36598168	36552236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
WTC11_00052582	chr2	-	14005	18	FSM	ENSG00000115808.12	ENST00000263918.9	14174	18	0	169	0	-169	multi-exon	TRUE	canonical	3	52	junction_13	8.34713965885495	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTCTTTTTAGTTAAC	-36961720	True	NA	NA	False	TTTAAA	-32	NA	36966536	36837866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36849626_36849713_36849801_36850999_36851108_36855211_36855353_36857855_36858024_36861131_36861254_36867813_36867862_36869553_36869730_36877890_36878028_36883931_36884076_36886715_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
WTC11_00052583	chr2	-	6907	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	28	2	28	-2	multi-exon	TRUE	canonical	3	42	junction_21	10.3487749447528	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAATGTTTAAATGTA	-37082823	True	NA	NA	False	ATTAAA	-18	NA	37084344	36980896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
WTC11_00052585	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	22.8336374675609	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
WTC11_00052587	chr2	-	10095	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	8	0	8	0	multi-exon	FALSE	canonical	3	43	junction_16	28.9697444543441	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37157086	False	98	0	True	AATAAA	-20	NA	37157184	37099209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
WTC11_00052593	chr2	-	2426	18	NIC	ENSG00000115825.11	novel	6156	19	NA	NA	31	-2731	combination_of_known_junctions	FALSE	canonical	3	61	junction_17	77.104880712947	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAGCACTTCATTATG	-37320421	True	NA	NA	False	AATACA	-24	NA	37324777	37253232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
WTC11_00052594	chr2	-	3441	20	NNC	ENSG00000115825.11	novel	6156	19	NA	NA	0	-2803	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	102.356175698397	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACGTTACATTACACAT	-37320452	True	NA	NA	False	NA	NA	NA	37324808	37253304	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37317786_37317900_37324680
WTC11_00052599	chr2	-	5101	2	FSM	ENSG00000163171.8	ENST00000295324.4	5096	2	0	-5	0	5	multi-exon	FALSE	canonical	3	81	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTAATTATCTTCCAT	-37667752	True	NA	-7	True	AATGAA	-23	NA	37671642	37641938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37646823_37671425
WTC11_00052602	chr2	-	5214	3	FSM	ENSG00000138061.12	ENST00000610745.5	5218	3	0	4	0	-4	multi-exon	FALSE	canonical	3	9	junction_2	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTTATTTGTCCAT	-38076013	True	NA	89	True	ATTAAA	-12	NA	38076151	38067512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38071311_38074345_38075390_38075779
WTC11_00052603	chr2	-	3812	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	-7	0	7	multi-exon	TRUE	canonical	3	269	junction_1	32.5059823553894	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCATTGGCTTTCTTAC	-38372887	True	NA	NA	False	ATTAAA	-31	NA	38377273	38293946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
WTC11_00052604	chr2	-	1905	12	FSM	ENSG00000119787.14	ENST00000405384.6	1905	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	95.3215523746201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATCACTGTTTCAAGA	-38372887	True	NA	NA	False	NA	NA	NA	38377273	38295608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
WTC11_00052609	chr2	-	4191	13	FSM	ENSG00000143889.16	ENST00000449105.8	4144	13	0	-47	0	47	multi-exon	FALSE	non_canonical	0	0	junction_9	195.446692789165	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCAAATAAAAATATTTG	-38595236	True	NA	43	True	TTTAAA	-30	NA	38602928	38561921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437
WTC11_00052611	chr2	-	6255	13	FSM	ENSG00000143889.16	ENST00000272249.7	2190	13	-1112	-2953	-1112	1414	multi-exon	FALSE	non_canonical	0	0	junction_10	290.516338706716	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAAGAGTTTTATTTGG	-38592697	False	NA	NA	False	NA	NA	NA	38592753	38560554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38577919_38578003_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529
WTC11_00052613	chr2	-	2201	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	-100	-414	0	414	multi-exon	FALSE	non_canonical	0	0	junction_2	288.079126861585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGGGGGCTGCAGTA	-38602956	False	NA	NA	False	ATTAAA	-15	NA	38603029	38580660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
WTC11_00052615	chr2	-	3843	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	133	-1523	0	1523	multi-exon	FALSE	canonical	3	368	junction_1	682.791980685837	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGACTTGTTTGCTTAT	-38701256	True	NA	-6	True	TATAAA	-15	NA	38751361	38742075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
WTC11_00052616	chr2	-	3014	9	FSM	ENSG00000115875.19	ENST00000425778.5	2857	9	54	-211	0	209	multi-exon	FALSE	canonical	3	154	junction_6	834.777627575152	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAACTTGGCACCCGTT	-38701256	True	NA	NA	False	NA	NA	NA	38751361	38743389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
WTC11_00052617	chr2	-	2356	8	FSM	ENSG00000115875.19	ENST00000313117.11	2356	8	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	180.731732641707	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	-38701256	True	NA	63	True	AATAAA	-23	NA	38751361	38743598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
WTC11_00052618	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	940.564026262965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-38701258	True	NA	NA	False	NA	NA	NA	38751363	38744452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
WTC11_00052619	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	697.517785597249	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	-38701253	True	NA	30	True	AATAAA	-16	NA	38751358	38744892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
WTC11_00052620	chr2	-	680	3	FSM	ENSG00000115875.19	ENST00000477635.5	680	3	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGATTTGTGTTCAA	-38747004	False	NA	28	True	AATAAA	-14	NA	38747044	38744894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693
WTC11_00052621	chr2	-	1847	7	FSM	ENSG00000115875.19	ENST00000431066.5	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	733.95572073525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGATTTGTGTTCAA	-38701177	True	NA	28	True	AATAAA	-14	NA	38751282	38744894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38749706_38750013_38750195_38751228
WTC11_00052622	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	185.691201251492	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	-38701247	True	NA	5	True	NA	NA	NA	38751352	38744917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
WTC11_00052626	chr2	-	1098	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	-26	-16	-26	16	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAAACTTCCACCCACA	-38960339	True	NA	-5	True	TTTAAA	-37	NA	38960368	38959270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38959300_38960400
WTC11_00052627	chr2	-	8254	22	FSM	ENSG00000115904.15	ENST00000395038.6	4123	22	0	-4131	0	-6	multi-exon	FALSE	canonical	3	42	junction_2	12.7425225950817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGTGTATTATTTTTG	-39120438	False	NA	-4	True	AATAAA	-20	NA	39120450	38981554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38986316_38987472_38987592_38995122_38995388_38996921_38997039_38997252_38997426_39006411_39006530_39007030_39007194_39010583_39010704_39012125_39012349_39013459_39013564_39013866_39013990_39014764_39014847_39022569_39023226_39024009_39024138_39035211_39035311_39035389_39035501_39051143_39051288_39054613_39054824_39056701_39056867_39058672_39058805_39067627_39067754_39120335
WTC11_00052628	chr2	-	8914	23	FSM	ENSG00000115904.15	ENST00000402219.8	8906	23	0	-8	0	8	multi-exon	FALSE	canonical	3	19	junction_2	17.757549901729	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCATGTATTTATTTT	-39121039	False	NA	10	True	AATAAA	-34	NA	39121051	38981540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38986316_38987472_38987592_38989269_38989315_38995122_38995388_38996921_38997039_38997252_38997426_39006411_39006530_39007030_39007194_39010583_39010704_39012125_39012349_39013459_39013564_39013866_39013990_39014764_39014847_39022569_39023226_39024009_39024138_39035211_39035311_39035389_39035501_39051143_39051288_39054613_39054824_39056701_39056867_39058672_39058805_39067627_39067754_39120335
WTC11_00052632	chr2	-	4389	33	FSM	ENSG00000011566.15	ENST00000341681.9	4271	33	236	-354	0	337	multi-exon	TRUE	canonical	3	115	junction_19	38.5812732868875	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGCTGTCTATGCT	-39437039	False	NA	-3	True	AATAAA	-30	NA	39437065	39248928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
WTC11_00052633	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_19	36.4604267403714	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-39428905	True	NA	0	True	AATAAA	-30	NA	39437285	39249265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
WTC11_00052634	chr2	-	564	3	FSM	ENSG00000011566.15	ENST00000495648.3	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	10	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTTTGCAACCTG	-39278407	False	NA	NA	False	NA	NA	NA	39278419	39271910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39272401_39272481_39272543_39278406
WTC11_00052636	chr2	-	2549	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	37	-381	0	380	multi-exon	FALSE	canonical	3	182	junction_8	30.9766937479705	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGTGGTTGTGTTGT	-39774882	True	NA	NA	False	AATACA	-21	NA	39779221	39735679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
WTC11_00052638	chr2	-	3169	8	FSM	ENSG00000138050.15	ENST00000460072.5	3148	8	0	-21	0	21	multi-exon	FALSE	canonical	3	56	junction_5	79.8846106606783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATAGTGTGATACAATT	-39765674	False	NA	NA	False	AATATA	-19	NA	39770013	39736038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423
WTC11_00052639	chr2	-	2620	7	ISM	ENSG00000138050.15	ENST00000505747.6	2205	10	9407	244	162	2	intron_retention	FALSE	canonical	3	203	junction_2	25.241610267352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCCATTGGAATG	-39765512	False	NA	0	True	ATTAAA	-21	NA	39769851	39736304	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423
WTC11_00052640	chr2	-	2336	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	-247	0	0	multi-exon	FALSE	canonical	3	56	junction_5	74.0541018445299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCTGGTTTAATGTT	-39774928	True	NA	NA	False	AAAAAG	-23	NA	39779267	39736059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
WTC11_00052642	chr2	-	1098	4	NNC	ENSG00000115944.15	novel	3056	4	NA	NA	0	27061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	934.674393691312	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGCACAAGGTCATC	-42351091	True	NA	NA	False	NA	NA	NA	42361172	42306484	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_42306511_42350502_42351360_42353211_42353344_42361089
WTC11_00052643	chr2	-	1144	4	NNC	ENSG00000115944.15	novel	2282	3	NA	NA	0	27061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	934.674393691312	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGCACAAGGTCATC	-42351136	True	NA	NA	False	NA	NA	NA	42361217	42306484	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_42306511_42350501_42351360_42353211_42353344_42361089
WTC11_00052644	chr2	-	458	3	FSM	ENSG00000115944.15	ENST00000468711.5	516	3	0	58	0	-58	multi-exon	FALSE	canonical	3	5	junction_1	1012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGGAGGAAGTACAAATT	-42351068	True	NA	NA	False	AATGAA	-17	NA	42361149	42333603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42333870_42353211_42353344_42361089
WTC11_00052645	chr2	-	2581	3	FSM	ENSG00000115944.15	ENST00000234301.3	2282	3	0	-299	0	299	multi-exon	FALSE	canonical	3	1933	junction_1	48	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTGTACCATTTAACAT	-42351136	True	NA	NA	False	NA	NA	NA	42361217	42349038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42351360_42353211_42353344_42361089
WTC11_00052646	chr2	-	895	3	FSM	ENSG00000115944.15	ENST00000464443.5	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGGAAAGAACACAGAAG	-42351111	True	NA	NA	False	NA	NA	NA	42361192	42350851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42351360_42353211_42353344_42360937
WTC11_00052647	chr2	-	306	2	FSM	ENSG00000115944.15	ENST00000463055.1	540	2	0	234	0	-234	multi-exon	FALSE	canonical	3	2029	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTCCTTCTTTTTCTT	-42351091	True	NA	NA	False	ACTAAA	-20	NA	42361172	42353120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42353344_42361089
WTC11_00052648	chr2	-	3676	2	FSM	ENSG00000171126.8	ENST00000394973.4	3656	2	0	-20	0	5	multi-exon	FALSE	canonical	3	13	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTACTGGGACCGCTTTA	-42493022	True	NA	-5	True	AATAAA	-23	NA	42493977	42442011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42444580_42492869
WTC11_00052650	chr2	-	3424	1	FSM	ENSG00000162881.6	ENST00000378661.3	1781	1	-1643	0	-1643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTCTTTAATTCTAAC	NA	False	NA	3	True	AATAAA	-36	NA	42765904	42762480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42762500_42765900
WTC11_00052652	chr2	-	3697	2	FSM	ENSG00000152518.8	ENST00000282388.4	3693	2	0	-4	0	4	multi-exon	FALSE	canonical	3	673	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAAGAGCTTTCTTTTT	-43217417	True	NA	-1	True	AATAAA	-25	NA	43226606	43222397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43225753_43226264
WTC11_00052655	chr2	-	6310	38	FSM	ENSG00000115970.19	ENST00000405006.8	6310	38	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_37	16.0559194475453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGCCTCCCCTACTTC	-43593350	True	NA	-15	True	CATAAA	-18	NA	43595974	43230851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595646
WTC11_00052657	chr2	-	2964	17	FSM	ENSG00000115970.19	ENST00000402360.6	2974	17	4	6	0	-6	multi-exon	FALSE	canonical	2	48	junction_11	10.1008585649934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACGTATCTGTGTATA	-43589792	False	NA	-5	True	AATAAA	-20	NA	43592416	43552073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316
WTC11_00052658	chr2	-	6605	38	FSM	ENSG00000138095.20	ENST00000260665.12	6603	38	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_9	308.944355908115	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTGCTGCTGCTTTTTT	-43964194	True	NA	0	True	AATAAA	-19	NA	43995989	43886221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052659	chr2	-	5259	37	FSM	ENSG00000138095.20	ENST00000682308.1	5259	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	378.925344450152	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACATCAGGGGAGACCT	-43964194	True	NA	NA	False	NA	NA	NA	43995989	43887492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052662	chr2	-	2030	10	FSM	ENSG00000138095.20	ENST00000683002.1	2028	10	0	-2	0	0	multi-exon	FALSE	canonical	3	6	junction_3	739.312059273792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-43912480	False	NA	-8	True	AATAAA	-15	NA	43912558	43887746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43890222_43890363_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431
WTC11_00052667	chr2	-	5625	36	FSM	ENSG00000138095.20	ENST00000683459.1	5624	36	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_9	316.408230239457	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-43964172	True	NA	-8	True	AATAAA	-15	NA	43995967	43887746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052668	chr2	-	5062	38	FSM	ENSG00000138095.20	ENST00000682546.1	5052	38	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_9	401.257473778328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-43964179	True	NA	-8	True	AATAAA	-15	NA	43995974	43887746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948516_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052670	chr2	-	5279	39	FSM	ENSG00000138095.20	ENST00000682585.1	5264	39	0	-15	0	0	multi-exon	FALSE	canonical	0	0	junction_10	450.31515895234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-43964194	True	NA	-8	True	AATAAA	-15	NA	43995989	43887746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43895367_43895567_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052671	chr2	-	5152	38	FSM	ENSG00000138095.20	ENST00000684619.1	5142	38	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_9	404.263658911765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-43995924	False	NA	-8	True	AATAAA	-15	NA	43996036	43887746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995773
WTC11_00052672	chr2	-	6182	9	FSM	ENSG00000138095.20	ENST00000684418.1	6182	9	0	0	0	0	multi-exon	FALSE	canonical	3	1641	junction_6	96.8658060153324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTAATTGTTTGAAAT	-43916842	False	NA	-45	True	NA	NA	NA	43916887	43887783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431
WTC11_00052674	chr2	-	7261	24	FSM	ENSG00000138095.20	ENST00000684743.1	7255	24	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_8	367.058851382271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATTAGTCTGCTGTTT	-43960006	False	NA	-6	True	ATTAAA	-24	NA	43960064	43888268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384
WTC11_00052678	chr2	-	3735	5	FSM	ENSG00000138095.20	ENST00000682434.1	3735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_4	56.0379335807451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAATAACCAGGCGATA	-43900674	False	NA	-31	True	AAGAAA	-18	NA	43900725	43888604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43896709_43899218_43899335_43899465
WTC11_00052684	chr2	-	3512	25	FSM	ENSG00000138095.20	ENST00000683989.1	3514	25	0	2	0	-2	multi-exon	FALSE	canonical	3	1380	junction_21	139.118854062113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCAGTAATCATGGGTT	-43964181	True	NA	NA	False	ATTAAA	-17	NA	43995976	43933442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00052687	chr2	-	6053	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_13	52.331103358311	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-44361844	False	NA	NA	False	ATTAAA	-19	NA	44361862	44317606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
WTC11_00052688	chr2	-	4811	14	FSM	ENSG00000138078.16	ENST00000260648.10	3672	14	925	-2064	0	0	multi-exon	FALSE	canonical	3	126	junction_13	28.8727057286752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44359731	False	NA	-7	True	ATTAAA	-16	NA	44359749	44318762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496
WTC11_00052689	chr2	-	5215	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	-3	0	0	multi-exon	FALSE	canonical	3	27	junction_14	51.5401567236853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357353	True	NA	-7	True	ATTAAA	-16	NA	44361494	44318762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
WTC11_00052691	chr2	-	4850	15	FSM	ENSG00000138078.16	ENST00000409272.5	3030	15	244	-2064	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.3925744134775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357420	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361523
WTC11_00052692	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	52.0866369760929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357420	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
WTC11_00052693	chr2	-	2309	13	NIC	ENSG00000138078.16	novel	5829	14	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	69.5878741033395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATTCGTTAAAGTTT	-44357353	True	NA	-131	True	GATAAA	-10	NA	44361494	44320928	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
WTC11_00052697	chr2	-	2967	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	-2057	0	99	multi-exon	FALSE	canonical	2	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCAGGCATGGTAG	-44935631	False	NA	NA	False	GATAAA	-22	NA	44935644	44920977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44923580_44935279
WTC11_00052698	chr2	-	2183	2	FSM	ENSG00000170577.8	ENST00000303077.7	2206	2	20	3	20	-3	multi-exon	FALSE	canonical	3	18	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCCCGCGGGCCGGGAG	-45009336	True	NA	-1	True	AATAAA	-37	NA	45009432	45005184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_45006486_45008550
WTC11_00052699	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_20	19.602232015768	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-45608035	True	NA	-1	True	AATAAA	-17	NA	45611267	45388679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
WTC11_00052700	chr2	-	1610	5	FSM	ENSG00000250565.7	ENST00000522587.6	1599	5	0	-11	0	11	multi-exon	FALSE	canonical	3	11	junction_4	15.9843673631458	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATCCATACATGCCACA	-46542046	True	NA	1	True	AATAAA	-32	NA	46542577	46511835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46512813_46535812_46535928_46536610_46536704_46541389_46541454_46542216
WTC11_00052701	chr2	-	572	4	FSM	ENSG00000250565.7	ENST00000524188.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	15.8605030044938	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCTGATTTTAAAAATG	-46541573	False	NA	NA	False	GATAAA	-35	NA	46541583	46527877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46528048_46535812_46535928_46536610_46536704_46541389
WTC11_00052702	chr2	-	2334	3	FSM	ENSG00000250565.7	ENST00000505245.6	2334	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTGTGACACTGAAG	-46541992	False	NA	NA	False	NA	NA	NA	46542002	46534299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46535928_46536610_46536704_46541389
WTC11_00052704	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	40.2541923282532	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	-46612602	True	NA	NA	False	NA	NA	NA	46617041	46580936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
WTC11_00052706	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	176.014203972293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612612	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
WTC11_00052708	chr2	-	4124	4	FSM	ENSG00000180398.13	ENST00000319466.9	4120	4	0	-4	0	0	multi-exon	FALSE	canonical	3	468	junction_3	61.1082827628319	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGATTTTGTTCAC	-46908602	True	NA	0	True	AATAAA	-20	NA	46915806	46901869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915722
WTC11_00052717	chr2	-	1917	6	FSM	ENSG00000143933.20	ENST00000272298.12	1210	6	0	-707	0	707	multi-exon	FALSE	canonical	3	8699	junction_1	552.787988292076	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAGGAGTAAATTGGCA	-47099978	True	NA	NA	False	AAAAAG	-4	NA	47176511	47159376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
WTC11_00052718	chr2	-	4502	5	FSM	ENSG00000143933.20	ENST00000460218.5	4502	5	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_1	432.247831110811	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	-47174190	False	NA	-21	True	AATAAA	-20	NA	47174207	47160163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733
WTC11_00052719	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	4235.12774305569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-47099983	True	NA	-37	True	AATAAA	-4	NA	47176516	47160179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
WTC11_00052721	chr2	-	3125	4	FSM	ENSG00000143933.20	ENST00000482532.5	1891	4	-971	-263	-715	0	multi-exon	FALSE	canonical	3	8699	junction_1	243.242448780818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	-47164915	False	NA	NA	False	NA	NA	NA	47164934	47160338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518
WTC11_00052725	chr2	-	1063	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	-17	0	17	multi-exon	TRUE	canonical	2	6	junction_1	1.4142135623731	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTGAATCATCCCTAA	-47344661	True	NA	NA	False	AATAAA	-18	NA	47344989	47331362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
WTC11_00052726	chr2	-	11653	2	FSM	ENSG00000184261.5	ENST00000327876.5	13564	2	3	1908	3	-1908	multi-exon	FALSE	canonical	3	165	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCACTAGCTAATTCAAG	-47569903	True	NA	NA	False	NA	NA	NA	47570982	47511197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47521809_47569940
WTC11_00052728	chr2	-	531	1	FSM	ENSG00000230979.3	ENST00000456046.1	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGGGCCCTCGCCCGGG	-47691179	False	NA	-60	True	NA	NA	NA	47691246	47690715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47690700_47691200
WTC11_00052731	chr2	-	1986	14	FSM	ENSG00000138081.22	ENST00000493962.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_8	18.4974010648482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-47835952	False	NA	-8	True	AGTAAA	-19	NA	47835962	47812848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871
WTC11_00052734	chr2	-	655	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	-24	-76	-24	76	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATGCATTGCAACATT	-48440563	True	NA	NA	False	TTTAAA	-25	NA	48440621	48439966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_48440000_48440600
WTC11_00052735	chr2	-	2836	7	FSM	ENSG00000179915.25	ENST00000401710.5	2873	7	37	0	25	0	multi-exon	FALSE	canonical	1	3	junction_6	5.70574758954123	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATATAAGGCACGTT	-50347683	False	NA	NA	False	AAAAAG	-24	NA	50347729	49921306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_49922252_49943703_49943792_50053270_50053591_50054954_50055045_50091322_50091495_50236788_50236971_50346690
WTC11_00052736	chr2	-	429	3	FSM	ENSG00000179915.25	ENST00000626192.1	360	3	-131	62	12	-62	multi-exon	FALSE	canonical	3	12	junction_2	1.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGGACCACTCTGCAA	NA	False	NA	NA	False	NA	NA	NA	50496064	50465466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50465562_50472297_50472472_50495904
WTC11_00052737	chr2	-	290	3	FSM	ENSG00000179915.25	ENST00000474354.1	574	3	284	0	284	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACCTGTGTAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	50528651	50497574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50497715_50506494_50506618_50528624
WTC11_00052738	chr2	-	625	1	FSM	ENSG00000238165.1	ENST00000426912.1	237	1	-352	-36	-352	36	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAATCCCCGCACTTTGG	NA	False	NA	NA	False	NA	NA	NA	50830030	50829405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50829400_50830000
WTC11_00052739	chr2	-	2162	10	NNC	ENSG00000115239.24	novel	2226	10	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_9	78.6355870808857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTTTTTTTTTTTTTTT	-53783075	True	NA	-1	True	ATTAAA	-20	NA	53786881	53669975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786816
WTC11_00052740	chr2	-	2234	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	-8	0	8	multi-exon	FALSE	canonical	3	215	junction_9	29.0287214094363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	-53783147	True	NA	3	True	ATTAAA	-24	NA	53786953	53669971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
WTC11_00052745	chr2	-	3073	3	FSM	ENSG00000068878.15	ENST00000488687.5	3073	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	24.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCCTGACTGGCTGTT	-53870933	False	NA	-20	True	AATAAA	-14	NA	53870960	53864869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53866224_53866746_53866881_53869375
WTC11_00052747	chr2	-	2333	7	FSM	ENSG00000115310.19	ENST00000317610.11	2333	7	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_6	100.661837632519	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038630	True	NA	-4	True	AATAAA	-17	NA	55050544	54972188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
WTC11_00052748	chr2	-	955	4	FSM	ENSG00000115310.19	ENST00000486085.5	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	448.131925020102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACCTTTACCTTCCAGC	-54987502	True	NA	NA	False	AGTAAA	-34	NA	54987633	54972584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_54973199_54973562_54973622_54982514_54982654_54987490
WTC11_00052750	chr2	-	551	3	FSM	ENSG00000162994.16	ENST00000463300.1	572	3	21	0	3	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGAATTCTATTTAAAA	-55231836	True	NA	NA	False	NA	NA	NA	55232271	55218344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55218601_55222234_55222494_55232235
WTC11_00052753	chr2	-	2626	17	NIC	ENSG00000085760.15	novel	2536	16	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	69.3403911421763	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGTTGTTTGTTTGAA	-55266668	True	NA	-23	True	ATTAAA	-14	NA	55269211	55236622	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55266380_55266519_55267568_55267636_55268577_55268740_55269168
WTC11_00052760	chr2	-	9786	33	FSM	ENSG00000115355.18	ENST00000436346.7	9751	33	0	-35	0	35	multi-exon	TRUE	canonical	3	37	junction_22	26.034813681636	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTTATTTTATTTC	-55417210	True	NA	35	True	TTTAAA	-16	NA	55419856	55287806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
WTC11_00052761	chr2	-	9505	33	FSM	ENSG00000115355.18	ENST00000336838.10	9505	33	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	27.6157896127831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTAGTAATCATTTAAA	-55416967	False	NA	0	True	AATAAA	-25	NA	55419613	55287841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328433_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
WTC11_00052763	chr2	-	9699	32	FSM	ENSG00000115355.18	ENST00000263630.13	9699	32	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	27.1919220422102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTAGTAATCATTTAAA	-55417242	True	NA	0	True	AATAAA	-25	NA	55419888	55287841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
WTC11_00052766	chr2	-	5120	17	FSM	ENSG00000115355.18	ENST00000426576.6	5120	17	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	21.0471939934995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCCTTTGTAATCAC	-55334318	False	NA	-20	True	AAGAAA	-30	NA	55334345	55293552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093
WTC11_00052767	chr2	-	7781	31	ISM	ENSG00000115355.18	ENST00000642200.1	6958	33	-7	6325	3	-620	5prime_fragment	FALSE	canonical	3	37	junction_20	26.1922168252751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGGAAATTTGTATT	-55417239	True	NA	-9	True	AATAAA	-15	NA	55419885	55294172	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
WTC11_00052773	chr2	-	363	1	FSM	ENSG00000233594.2	ENST00000457252.2	467	1	99	5	99	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAAACTGAATTGAGTC	NA	False	NA	NA	False	NA	NA	NA	55435523	55435160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55435200_55435500
WTC11_00052775	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_15	84.773572496091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611202	True	NA	-1	True	AATAAA	-18	NA	55617622	55547291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
WTC11_00052776	chr2	-	6476	17	NNC	ENSG00000275052.5	novel	5506	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	26	junction_13	103.931392634757	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55618726	True	NA	-1	True	AATAAA	-18	NA	55618880	55547291	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598703_55599040_55603977_55604077_55615450_55615507_55617143
WTC11_00052777	chr2	-	5396	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	-1086	0	0	multi-exon	FALSE	canonical	1	88	junction_14	68.9110215342139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611188	True	NA	-1	True	AATAAA	-18	NA	55617608	55547291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
WTC11_00052779	chr2	-	1614	3	NNC	ENSG00000275052.5	novel	2981	3	NA	NA	218	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACCTGAAGATGTTTC	-55617236	False	NA	-10	True	ATTAAA	-15	NA	55617390	55614002	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55615314_55615450_55615507_55617143
WTC11_00052780	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-55618726	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55615507_55617143_55617979_55618065
WTC11_00052781	chr2	-	4546	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	3	0	-3	multi-exon	FALSE	canonical	3	328	junction_17	34.4977285986143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATCGACTATTATTTAA	-55689059	True	NA	-3	True	ATTAAA	-45	NA	55693844	55634063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
WTC11_00052782	chr2	-	4542	28	NNC	ENSG00000138035.15	novel	4549	28	NA	NA	0	-3	intron_retention	FALSE	canonical	3	65	junction_26	75.8263122512867	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATCGACTATTATTTAA	-55689059	True	NA	-3	True	ATTAAA	-45	NA	55693844	55634063	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686441_55687644_55687706_55693662
WTC11_00052783	chr2	-	1281	9	FSM	ENSG00000138035.15	ENST00000481066.1	1281	9	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	20.8622715685517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGATGGAAGAATGAGGC	-55647372	False	NA	NA	False	NA	NA	NA	55647382	55636369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55645433_55646258_55646323_55646414_55646487_55647346
WTC11_00052785	chr2	-	2728	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	-15	-5	0	5	multi-exon	TRUE	canonical	3	52	junction_10	40.7061633605673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGAGGTTTTTCAGTG	-55921414	True	NA	1	True	AATAAA	-30	NA	55923797	55865961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
WTC11_00052786	chr2	-	2986	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	43	-5	43	5	multi-exon	FALSE	canonical	3	101	junction_10	18.7072178583562	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGAGGTTTTTCAGTG	NA	False	NA	1	True	AATAAA	-30	NA	55924096	55865961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
WTC11_00052787	chr2	-	1662	14	FSM	ENSG00000115392.12	ENST00000233741.9	1658	14	0	-4	0	0	multi-exon	FALSE	canonical	3	412	junction_3	45.2760108640692	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-58235796	True	NA	-3	True	AATAAA	-18	NA	58241325	58159242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
WTC11_00052788	chr2	-	1702	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	-4	0	0	multi-exon	FALSE	canonical	3	126	junction_7	105.375631284653	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-58235821	True	NA	-3	True	AATAAA	-18	NA	58241350	58159242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
WTC11_00052790	chr2	-	1959	2	FSM	ENSG00000115392.12	ENST00000470506.1	733	2	0	-1226	0	-16	multi-exon	FALSE	canonical	3	554	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTACTATGGATTGTGG	-58165786	False	NA	NA	False	TATAAA	-17	NA	58165803	58161638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58163518_58165723
WTC11_00052795	chr2	-	2392	5	FSM	ENSG00000119866.22	ENST00000359629.10	2494	5	123	-21	-4	0	multi-exon	FALSE	canonical	3	81	junction_1	151.358845133015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGTGCTGTCTCGT	-60553501	False	NA	NA	False	AATAAA	-35	NA	60553511	60451145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60553215
WTC11_00052799	chr2	-	3210	5	NIC	ENSG00000119866.22	novel	4052	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_1	170.997807003482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	-60553451	False	NA	-7	True	AATAAA	-14	NA	60553461	60452157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_60452667_60460401_60462425_60468731_60468834_60545970_60546301_60553215
WTC11_00052803	chr2	-	6089	4	FSM	ENSG00000119866.22	ENST00000642384.2	6102	4	13	0	-7	0	multi-exon	FALSE	canonical	3	391	junction_1	31.0161248385416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAAGCTTCTTGTGTC	-60551414	True	NA	-6	True	AATAAA	-16	NA	60553641	60457193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60462425_60468731_60468834_60545970_60546301_60553215
WTC11_00052808	chr2	-	5006	2	FSM	ENSG00000119866.22	ENST00000643716.1	4874	2	223	-355	0	294	multi-exon	FALSE	canonical	3	466	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGTAAATAGAACTG	-60553399	False	NA	NA	False	NA	NA	NA	60553409	60541488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60546301_60553215
WTC11_00052809	chr2	-	1333	1	FSM	ENSG00000237522.1	ENST00000414613.1	1231	1	-397	295	-397	-295	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGATTCACTGGAACC	NA	False	NA	NA	False	NA	NA	NA	60938446	60937113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60937100_60938400
WTC11_00052810	chr2	-	4309	26	FSM	ENSG00000115464.15	ENST00000411912.5	4309	26	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	37.8173716696441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-61241586	False	NA	-11	True	ATTAAA	-21	NA	61241614	61187462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559
WTC11_00052811	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_66	143.333437421167	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-61471056	False	NA	-11	True	ATTAAA	-21	NA	61471087	61187462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
WTC11_00052813	chr2	-	2732	24	FSM	ENSG00000115464.15	ENST00000453734.1	2708	24	0	-24	0	24	multi-exon	FALSE	canonical	3	46	junction_16	18.8587426387085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCAACTTCATTTCTAGG	-61280308	False	NA	NA	False	AGTAAA	-38	NA	61280333	61226763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243
WTC11_00052816	chr2	-	4929	26	NNC	ENSG00000082898.19	novel	4988	25	NA	NA	0	74491	intron_retention	TRUE	non_canonical	0	0	junction_1	290.153597944261	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCCAGGTACAGTGGCT	-61515208	True	NA	NA	False	NA	NA	NA	61538356	61401540	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61401567_61477933_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
WTC11_00052817	chr2	-	5909	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	-385	-536	0	376	multi-exon	FALSE	canonical	2	723	junction_18	187.653932183391	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTGAGCTGAGATTG	NA	False	NA	NA	False	NA	NA	NA	61538741	61477312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
WTC11_00052819	chr2	-	4613	19	FSM	ENSG00000082898.19	ENST00000677476.1	4613	19	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_18	187.438722497135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61500514	False	NA	38	True	NA	NA	NA	61500568	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712
WTC11_00052821	chr2	-	5126	22	FSM	ENSG00000082898.19	ENST00000677190.1	5126	22	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_18	186.317603658663	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61523643	False	NA	38	True	NA	NA	NA	61523690	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610
WTC11_00052824	chr2	-	5801	25	FSM	ENSG00000082898.19	ENST00000676667.1	5801	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_24	292.429288698805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61535395	False	NA	38	True	NA	NA	NA	61535870	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61534422
WTC11_00052828	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	297.458503722239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537305	False	NA	38	True	NA	NA	NA	61537780	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
WTC11_00052829	chr2	-	4641	27	FSM	ENSG00000082898.19	ENST00000677150.1	4641	27	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_26	400.040621088297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537722	False	NA	38	True	NA	NA	NA	61538197	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61534557_61534679_61537561_61537669_61538137
WTC11_00052831	chr2	-	4440	25	FSM	ENSG00000082898.19	ENST00000676771.1	4440	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_24	359.606360309436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61538041	False	NA	38	True	NA	NA	NA	61538516	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
WTC11_00052832	chr2	-	4500	26	FSM	ENSG00000082898.19	ENST00000677814.1	4500	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_25	289.244992350775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61538056	False	NA	38	True	NA	NA	NA	61538531	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
WTC11_00052833	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_24	291.960539452204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	38	True	NA	NA	NA	61538741	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
WTC11_00052842	chr2	-	2071	15	NNC	ENSG00000115484.15	novel	2376	14	NA	NA	0	52552	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	856.967616014724	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTCAGGGTGGACAC	-61858389	True	NA	NA	False	AAAAAG	-3	NA	61888656	61815532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61815568_61868424_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
WTC11_00052843	chr2	-	2072	15	NNC	ENSG00000115484.15	novel	2376	14	NA	NA	0	52552	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	856.967616014724	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTCAGGGTGGACAC	-61858389	True	NA	NA	False	AAAAAG	-3	NA	61888656	61815532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61815569_61868424_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
WTC11_00052845	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	17.8208679175099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-61852553	True	NA	2	True	AATAAA	-25	NA	61854060	61824847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
WTC11_00052847	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_12	297.415136322295	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-61858389	True	NA	2	True	NA	NA	NA	61888656	61868084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
WTC11_00052849	chr2	-	1657	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	-3	0	3	multi-exon	FALSE	canonical	3	13	junction_1	0.942809041582063	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTTGTGCAATTAT	-62506141	False	NA	NA	False	AATAAA	-34	NA	62506195	62500214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
WTC11_00052850	chr2	-	448	1	FSM	ENSG00000229503.1	ENST00000454675.1	477	1	79	-50	79	50	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATGAAGTAGC	NA	False	NA	NA	False	AATAAA	-23	NA	62532980	62532532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_62532500_62533000
WTC11_00052855	chr2	-	4701	23	FSM	ENSG00000143952.20	ENST00000409558.8	4337	23	-356	-8	0	8	multi-exon	FALSE	canonical	3	45	junction_21	19.3421242006932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAACTTTTTTTTAAGTGG	-64017397	True	NA	-3	True	AATAAA	-28	NA	64019428	63892137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981852_63983863_63984020_64018937
WTC11_00052856	chr2	-	4737	23	FSM	ENSG00000143952.20	ENST00000272322.9	4725	23	0	-12	0	8	multi-exon	FALSE	canonical	3	57	junction_21	17.6799484872665	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAACTTTTTTTTAAGTGG	-64017397	True	NA	-3	True	AATAAA	-28	NA	64019428	63892137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981888_63983863_63984020_64018937
WTC11_00052857	chr2	-	3482	8	NNC	ENSG00000197329.12	novel	3716	7	NA	NA	0	3708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.2662518177139	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGTTTTCCTAATAATC	-64137627	True	NA	NA	False	AAAAAG	-1	NA	64144362	64088943	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_64088973_64092856_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
WTC11_00052859	chr2	-	3709	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	7	0	-7	multi-exon	FALSE	canonical	3	217	junction_6	22.2785397486759	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTGAGGCCTTTTC	-64137685	True	NA	NA	False	AATAAA	-18	NA	64144420	64092658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
WTC11_00052860	chr2	-	698	5	FSM	ENSG00000197329.12	ENST00000466177.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	121.472219046167	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTACAACATCTTAAATT	-64137627	True	NA	NA	False	AATATA	-30	NA	64144362	64100397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64100500_64104553_64104598_64104700_64104831_64108239_64108380_64144080
WTC11_00052863	chr2	-	219	1	FSM	ENSG00000270354.1	ENST00000604190.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGAGCACATAAACCAT	NA	False	NA	NA	False	NA	NA	NA	64208716	64208497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64208500_64208700
WTC11_00052864	chr2	-	5557	2	FSM	ENSG00000179833.4	ENST00000313349.3	5549	2	-7	-1	-7	1	multi-exon	FALSE	canonical	3	22	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCATGCTTGCAGTTTT	-64653563	True	NA	-6	True	AATAAA	-16	NA	64653920	64631619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64636876_64653619
WTC11_00052866	chr2	-	629	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	70	-28	12	28	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTAATCTTTCAACTTTT	-65055271	True	NA	63	True	AATAGA	-31	NA	65056156	65047825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_65048213_65055914
WTC11_00052867	chr2	-	660	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	39	-36	12	0	multi-exon	FALSE	canonical	3	12	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	-65055271	True	NA	35	True	AATAGA	-3	NA	65056156	65047853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_65048213_65051278_65051338_65055914
WTC11_00052869	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	633.230342503158	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116446	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
WTC11_00052874	chr2	-	2373	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	-50	-90	-24	90	multi-exon	TRUE	canonical	3	143	junction_4	154.837616553601	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACGTTCCAAAGACGATA	-68055084	True	NA	NA	False	AATATA	-38	NA	68063033	68041039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
WTC11_00052876	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	241.439019216033	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-68055060	True	NA	NA	False	NA	NA	NA	68063009	68042676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
WTC11_00052877	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-68154914	True	NA	-32	True	AATAAA	-19	NA	68157527	68129804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
WTC11_00052878	chr2	-	1151	8	NIC	ENSG00000243667.7	novel	1517	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.0993869026224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGTATTAAAGAATCC	-68154869	True	NA	NA	False	AATAAA	-24	NA	68157482	68131759	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_68132006_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
WTC11_00052884	chr2	-	948	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	18	-68	0	55	multi-exon	FALSE	canonical	3	367	junction_5	20.457023144103	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGATTTTATCCAAGGAT	-69437403	False	NA	39	True	NA	NA	NA	69437417	69396057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
WTC11_00052886	chr2	-	1036	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	-2	0	2	multi-exon	FALSE	canonical	3	21	junction_7	137.932399887682	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTTGCTTTACCTC	-69433827	True	NA	-21	True	AATAAA	-31	NA	69437475	69396117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
WTC11_00052887	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	187.333629893004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	-69437614	False	NA	-16	True	AATAAA	-36	NA	69437628	69396112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
WTC11_00052891	chr2	-	768	4	FSM	ENSG00000115977.21	ENST00000495836.1	965	4	0	197	0	-197	multi-exon	FALSE	canonical	3	13	junction_2	18.9267594221045	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATATGAACCATTCC	-69642180	True	NA	NA	False	NA	NA	NA	69643717	69544435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69544545_69556859_69556979_69642877_69643275_69643574
WTC11_00052900	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	36	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	-70124791	True	NA	-4	True	AAAAAG	-18	NA	70125317	70124035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70124426_70125045
WTC11_00052901	chr2	-	2526	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	1	-3	-1	3	multi-exon	FALSE	canonical	3	16	junction_9	9.19473816247876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCATGGTTGCCTGTTT	-70190482	True	NA	NA	False	AATAAA	-27	NA	70191018	70149881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
WTC11_00052902	chr2	-	548	3	FSM	ENSG00000115998.8	ENST00000428010.5	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAGCTGTCAAAATCAT	-70190468	True	NA	NA	False	NA	NA	NA	70191004	70181805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70181998_70182666_70182936_70190917
WTC11_00052903	chr2	-	829	3	FSM	ENSG00000115998.8	ENST00000428751.5	662	3	-81	-86	-39	0	multi-exon	FALSE	canonical	2	4	junction_2	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAGCTGTCAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	70191058	70181805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70181998_70182666_70182936_70190690
WTC11_00052904	chr2	-	4634	13	FSM	ENSG00000116001.17	ENST00000433529.7	4634	13	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_8	71.8974481852837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70238490	True	NA	1	True	AATAAA	-25	NA	70248628	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00052905	chr2	-	4643	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	-60	-760	0	0	multi-exon	FALSE	canonical	3	81	junction_2	122.470971617314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70238502	True	NA	1	True	AATAAA	-25	NA	70248640	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00052907	chr2	-	4712	12	NIC	ENSG00000116001.17	novel	4633	12	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_8	161.3629449409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70248720	False	NA	1	True	AATAAA	-25	NA	70248742	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00052913	chr2	-	526	5	FSM	ENSG00000116001.17	ENST00000477415.5	510	5	-16	0	0	0	multi-exon	FALSE	canonical	3	361	junction_4	69.7603038984206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAATAAAAA	-70227814	False	NA	-37	True	TTTAAA	-37	NA	70227839	70216152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734
WTC11_00052923	chr2	-	445	5	NNC	ENSG00000143977.14	novel	527	5	NA	NA	0	43101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3171.2557745316	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGGGAACGTCAATGTT	-70249295	True	NA	NA	False	NA	NA	NA	70293711	70238260	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_70238290_70281510_70281685_70288067_70288193_70289349_70289373_70293617
WTC11_00052924	chr2	-	461	5	NNC	ENSG00000143977.14	novel	527	5	NA	NA	0	28141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3171.2557745316	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATGTACCAGGATACA	-70249314	True	NA	NA	False	NA	NA	NA	70293730	70253220	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_70253247_70281510_70281685_70288067_70288193_70289349_70289373_70293617
WTC11_00052925	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	2135.76699727912	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-70249324	True	NA	-3	True	ATTAAA	-38	NA	70293740	70281361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
WTC11_00052926	chr2	-	571	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	-5	0	0	multi-exon	FALSE	canonical	3	386	junction_2	4291	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-70249324	True	NA	-3	True	ATTAAA	-38	NA	70293740	70281361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70288067_70288193_70293617
WTC11_00052928	chr2	-	2406	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	-8	0	7	multi-exon	FALSE	canonical	3	92	junction_2	930.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCCTTATATCTGG	-70278681	True	NA	5	True	AATAAA	-30	NA	70302056	70295967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70301604_70301924
WTC11_00052929	chr2	-	2115	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	-8	0	7	multi-exon	TRUE	canonical	2	26	junction_2	963.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCCTTATATCTGG	-70278692	True	NA	5	True	AATAAA	-30	NA	70302067	70295967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70300981_70301603
WTC11_00052930	chr2	-	1817	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	-7	0	7	multi-exon	FALSE	canonical	3	1916	junction_2	18.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCCTTATATCTGG	-70278715	True	NA	5	True	AATAAA	-30	NA	70302090	70295967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70300981_70301924
WTC11_00052936	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	74.6497812706106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	-70759808	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
WTC11_00052937	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_10	21.704294249961	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	-70759843	True	NA	-24	True	AATAAA	-16	NA	70768212	70675092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
WTC11_00052938	chr2	-	3042	2	FSM	ENSG00000144043.12	ENST00000478068.1	3579	2	539	-2	539	0	multi-exon	FALSE	canonical	3	147	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-70987638	False	NA	NA	False	AATAAA	-16	NA	70989182	70985941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70988716_70988914
WTC11_00052939	chr2	-	3363	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	2	0	2	0	multi-exon	FALSE	canonical	3	135	junction_4	12.8840987267251	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-70993327	True	NA	NA	False	AATAAA	-16	NA	70994871	70985941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
WTC11_00052943	chr2	-	1151	3	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCCACTTACAAAGCTGC	-71090676	True	NA	NA	False	AAAACA	-10	NA	71090702	71083635	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_71084382_71088226_71088329_71090399
WTC11_00052944	chr2	-	941	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	-117	0	114	multi-exon	FALSE	canonical	3	102	junction_2	22	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAGAATGTTTTGGAA	-71127643	True	NA	NA	False	NA	NA	NA	71130229	71109569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71110123_71124205_71124544_71130179
WTC11_00052945	chr2	-	2036	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	0	746	intron_retention	FALSE	canonical	3	61	junction_2	42.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAACATTGATGTGGTT	-71127643	True	NA	NA	False	AGTAAA	-2	NA	71130229	71108937	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_71110123_71124205_71124544_71129716
WTC11_00052947	chr2	-	836	2	FSM	ENSG00000124370.11	ENST00000494660.6	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTAATTATTTTAATG	-71127628	True	NA	NA	False	AAAACA	-33	NA	71130214	71124205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71124544_71129716
WTC11_00052949	chr2	-	5910	22	FSM	ENSG00000144036.16	ENST00000272427.11	5910	22	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	15.5333012174495	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTGTCTCATGGGTAT	-72818554	True	NA	-1	True	ATTAAA	-33	NA	72826033	72175983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72179462_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
WTC11_00052950	chr2	-	9092	23	FSM	ENSG00000144036.16	ENST00000634650.1	2583	23	-23	-6486	-1	3161	multi-exon	FALSE	canonical	0	0	junction_1	46.5994892321173	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTCTGCTTTATTGTG	-72818563	True	NA	NA	False	AATAAA	-14	NA	72826042	72172822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72179462_72182893_72182906_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
WTC11_00052951	chr2	-	5861	18	FSM	ENSG00000144036.16	ENST00000410104.1	5795	18	-1	-65	-1	65	multi-exon	FALSE	canonical	3	134	junction_3	14.2879434741226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCCTAGAATTGTATAC	-72818563	True	NA	NA	False	ATTAAA	-20	NA	72826042	72461410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
WTC11_00052954	chr2	-	887	10	NIC	ENSG00000144040.13	novel	915	12	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.0610129796905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTAGAGTGCCC	-73071687	False	NA	NA	False	NA	NA	NA	73071700	72944741	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_72945100_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
WTC11_00052959	chr2	-	385	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	-41	7	6	-7	multi-exon	FALSE	canonical	3	61	junction_1	91.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGATCAGTGTTGCT	-73069439	True	NA	-11	True	AATAAA	-32	NA	73071703	73053335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73053552_73058527_73058597_73071603
WTC11_00052960	chr2	-	374	3	NNC	ENSG00000144040.13	novel	351	3	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	116.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTGAGATCAGTGTT	-73071686	False	NA	-14	True	AATAAA	-29	NA	73071699	73053338	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_73053548_73058527_73058597_73071603
WTC11_00052961	chr2	-	6287	6	FSM	ENSG00000135631.17	ENST00000486777.7	6285	6	0	-2	0	2	multi-exon	FALSE	canonical	3	11	junction_3	16.1046577113579	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTGTTGTGTTCCTGT	-73111886	True	NA	-2	True	AATAAA	-19	NA	73112948	73073379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73075725_73075992_73076183_73079650_73081664_73088049_73088750_73088878_73089316_73112346
WTC11_00052962	chr2	-	4344	5	FSM	ENSG00000135631.17	ENST00000258098.6	4342	5	0	-2	0	2	multi-exon	FALSE	canonical	3	12	junction_2	16.7107749670684	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTGTTGTGTTCCTGT	-73112998	False	NA	-2	True	AATAAA	-19	NA	73113018	73073379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73075725_73075992_73076183_73088049_73088750_73088878_73089316_73112346
WTC11_00052964	chr2	-	1127	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	-33	-4	-33	4	multi-exon	FALSE	canonical	3	126	junction_1	13.1600721882519	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTCCTAGAATAAGAGC	-73232280	True	NA	0	True	AATAAA	-21	NA	73233272	73228005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
WTC11_00052966	chr2	-	546	3	ISM	ENSG00000163013.12	ENST00000520186.1	817	4	128	819	128	-819	5prime_fragment	FALSE	canonical	2	7	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTAATTTCTTGGTTA	-73283011	False	NA	-9	True	ATTAAA	-13	NA	73284303	73272015	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_73272303_73273014_73273130_73284159
WTC11_00052968	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	157.209255452725	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-73730635	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
WTC11_00052969	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	360.68401683468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730690	True	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
WTC11_00052970	chr2	-	1120	6	FSM	ENSG00000144034.16	ENST00000318190.7	819	6	-301	0	-301	0	multi-exon	FALSE	canonical	3	110	junction_4	341.389162100967	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	73737701	73729889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734592_73737301
WTC11_00052971	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_3	174.021710012158	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	-73730630	True	NA	-3	True	AATAAA	-19	NA	73737340	73730263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
WTC11_00052975	chr2	-	1717	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	45	-109	9	109	multi-exon	FALSE	canonical	3	209	junction_7	20.3834338373101	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACTTTTAGGGATTG	-73776540	True	NA	NA	False	NA	NA	NA	73780112	73762074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
WTC11_00052977	chr2	-	867	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	141	-263	-25	263	multi-exon	TRUE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAGATTATATTCAAT	-73981451	False	NA	NA	False	AATAAA	-13	NA	73981471	73957703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73958208_73981108
WTC11_00052978	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1556	junction_1	299.322568477554	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-74136256	True	NA	-3	True	ATTAAA	-33	NA	74147912	74135399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
WTC11_00052979	chr2	-	459	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	-15	0	0	multi-exon	FALSE	canonical	3	845	junction_1	709.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-74136249	True	NA	-3	True	ATTAAA	-33	NA	74147905	74135399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74135659_74145188_74145304_74147820
WTC11_00052980	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_2	39.7290825466685	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-74168504	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
WTC11_00052985	chr2	-	1764	5	FSM	ENSG00000204843.13	ENST00000491465.5	2444	5	690	-10	690	9	multi-exon	TRUE	canonical	3	1037	junction_3	39.1599284984026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGAGTGGGACTTG	-74364166	False	NA	7	True	ATTAAA	-29	NA	74364211	74361144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293
WTC11_00052986	chr2	-	4240	27	FSM	ENSG00000204843.13	ENST00000434055.5	4229	27	0	-11	0	9	multi-exon	FALSE	canonical	3	767	junction_17	106.069622385014	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGAGTGGGACTTG	-74370182	True	NA	7	True	ATTAAA	-29	NA	74391867	74361144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
WTC11_00052987	chr2	-	4134	26	FSM	ENSG00000204843.13	ENST00000409438.5	4145	26	11	0	11	0	multi-exon	FALSE	canonical	3	40	junction_25	261.715980406241	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-74374241	True	NA	-5	True	ATTAAA	-17	NA	74374724	74361156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
WTC11_00052988	chr2	-	4367	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	-2	0	0	multi-exon	FALSE	canonical	3	767	junction_18	107.955231284043	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGGTGTTGAGA	-74392075	False	NA	-3	True	ATTAAA	-19	NA	74392087	74361154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
WTC11_00052989	chr2	-	4886	20	FSM	ENSG00000204843.13	ENST00000466110.5	5414	20	528	0	381	0	multi-exon	FALSE	canonical	3	767	junction_15	107.446076148822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTCCTGTGTGGTGTT	-74371468	False	NA	-7	True	ATTAAA	-15	NA	74371514	74361158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365658_74365892_74366019_74366243_74366376_74366458_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978
WTC11_00052993	chr2	-	2385	1	FSM	ENSG00000284308.2	ENST00000640868.1	2407	1	23	-1	23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCTCTTGTCAGTT	-74416400	False	NA	-2	True	AATAAA	-25	NA	74416560	74414175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74414200_74416600
WTC11_00052995	chr2	-	2647	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	-1	0	0	multi-exon	FALSE	canonical	2	15	junction_12	151.733227152863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-74440167	False	5307	21	True	NA	NA	NA	74440583	74425834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
WTC11_00052996	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	108.725752497733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-74440215	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
WTC11_00052998	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	27.7795334615044	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-74436630	True	NA	21	True	NA	NA	NA	74441937	74425834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
WTC11_00053002	chr2	-	2867	4	FSM	ENSG00000115275.15	ENST00000448666.7	2867	4	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	10.2306728354819	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGCCAGATTTGCC	-74457198	False	8184	0	True	AATAAA	-25	NA	74465382	74461056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895
WTC11_00053003	chr2	-	2400	2	FSM	ENSG00000115275.15	ENST00000462189.1	2400	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAACTCTATTGCTTT	-74455462	False	NA	-13	True	AATAAA	-12	NA	74463646	74461069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189
WTC11_00053004	chr2	-	2283	4	FSM	ENSG00000115275.15	ENST00000647915.1	2269	4	0	-14	0	0	multi-exon	FALSE	canonical	3	22	junction_3	87.4693597146389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGTCTATTTTTCTAA	-74457216	False	8184	-49	True	NA	NA	NA	74465400	74461105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189_74463387_74464895_74464988_74465313
WTC11_00053006	chr2	-	2867	3	FSM	ENSG00000115275.15	ENST00000648768.1	2862	3	0	-5	0	0	multi-exon	FALSE	canonical	3	221	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-74457143	False	8184	-122	True	NA	NA	NA	74465327	74461178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463387_74464495_74464723_74464895
WTC11_00053013	chr2	-	4128	9	FSM	ENSG00000135637.14	ENST00000393965.8	4128	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	5.38371386683951	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTTTCCTGCCTTC	-74482507	True	NA	NA	False	NA	NA	NA	74482998	74472831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
WTC11_00053017	chr2	-	216	1	FSM	ENSG00000179528.16	ENST00000618878.1	268	1	-58	110	3	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTAAAACTTTCCGCGG	-74498840	False	121	NA	False	NA	NA	NA	74499600	74499384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74499400_74499600
WTC11_00053018	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	7.71693076346829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507399	False	NA	-4	True	AATAAA	-16	NA	74507416	74505042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
WTC11_00053020	chr2	-	845	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	39.0830445973698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTTCTGCCTTATTC	-74507399	False	NA	-5	True	AATAAA	-15	NA	74507416	74505043	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
WTC11_00053022	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_2	269.74815312751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	-74515431	True	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
WTC11_00053023	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_2	73.6266935289097	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515368	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
WTC11_00053024	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_9	85.6846997345211	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515377	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
WTC11_00053025	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	281.491030052469	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	-74515356	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
WTC11_00053026	chr2	-	457	2	FSM	ENSG00000115307.17	ENST00000462297.1	457	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAACAGCCCTAACATTT	-74513285	False	NA	-88	True	NA	NA	NA	74527614	74527031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74527122_74527247
WTC11_00053028	chr2	-	663	3	FSM	ENSG00000115307.17	ENST00000472800.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	84.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCACTCCTCTGCTGCT	-74515431	True	NA	NA	False	NA	NA	NA	74529760	74528821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74528936_74529131_74529500_74529579
WTC11_00053029	chr2	-	6175	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	-4327	989	-29	-150	multi-exon	TRUE	canonical	3	125	junction_9	35.1687290952181	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCAGGCCCAGCACCGA	-74553853	True	NA	NA	False	NA	NA	NA	74553990	74533402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
WTC11_00053030	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_13	63.9682798612122	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-74553805	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
WTC11_00053031	chr2	-	2378	12	FSM	ENSG00000115318.12	ENST00000393937.6	2398	12	20	0	4	0	multi-exon	FALSE	canonical	1	3	junction_9	77.9628010470855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCCAGGAGTCAGT	-74553801	True	NA	-13	True	TATAAA	-18	NA	74553938	74533129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74550184_74550349_74552321_74552647_74553875
WTC11_00053032	chr2	-	2814	12	FSM	ENSG00000115318.12	ENST00000409549.5	2897	12	83	0	83	0	multi-exon	FALSE	canonical	3	11	junction_6	76.1725965345144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATACAGCTTTACCTCT	-74552987	False	NA	-136	True	NA	NA	NA	74553001	74533252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321
WTC11_00053036	chr2	-	1333	1	FSM	ENSG00000272711.1	ENST00000610008.1	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCTCAGCAAAACT	-74833971	False	NA	-3	True	AATAAA	-17	NA	74833987	74832654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74832700_74834000
WTC11_00053037	chr2	-	514	4	NNC	ENSG00000115363.14	novel	524	3	NA	NA	141	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.55777733351102	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTATCTCTCCCC	-75561146	False	NA	-2	True	AATAAA	-17	NA	75561157	75558481	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_75558517_75558546_75558700_75560679_75560920_75561071
WTC11_00053038	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	21.0586049810998	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75709037	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
WTC11_00053039	chr2	-	437	3	FSM	ENSG00000005436.14	ENST00000486016.1	595	3	52	106	52	-106	multi-exon	FALSE	canonical	3	91	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTTCACTACTGAAAT	-75694411	False	NA	NA	False	TATAAA	-32	NA	75694427	75690593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75690720_75691976_75692101_75694240
WTC11_00053040	chr2	-	1068	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	-2	0	2	multi-exon	FALSE	canonical	3	117	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCTTAAAGGACTGTT	-75709021	True	NA	NA	False	AATAAA	-22	NA	75710899	75701793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75702424_75706522_75706652_75710590
WTC11_00053047	chr2	-	1276	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	-6	0	6	multi-exon	FALSE	canonical	3	360	junction_3	38.7967459975705	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGCTTATTATTGTT	-84455308	True	NA	1	True	AATAAA	-25	NA	84459280	84423521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
WTC11_00053049	chr2	-	289	2	FSM	ENSG00000163541.12	ENST00000488234.1	275	2	0	-14	0	14	multi-exon	FALSE	canonical	3	482	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTTTCAAGATTCA	-84441082	False	NA	NA	False	NA	NA	NA	84441092	84433192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84433436_84441046
WTC11_00053052	chr2	-	1823	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	-9	0	-7	multi-exon	FALSE	canonical	2	12	junction_3	7.41619848709566	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATAGATTTTTATTCAT	-84881073	False	121	-10	True	AATAAA	-36	NA	84881084	84821656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
WTC11_00053055	chr2	-	5097	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	-157	-3386	-62	1515	multi-exon	FALSE	canonical	3	23	junction_2	3.64005494464026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGGTTTGGCTCCCACA	-84881134	True	NA	NA	False	AATAAA	-16	NA	84881307	84834403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
WTC11_00053056	chr2	-	6054	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	-4	0	4	multi-exon	FALSE	canonical	3	169	junction_1	22.2311093340441	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATACATTTATTTATTT	-85318978	True	NA	41	True	AATAAA	-24	NA	85327989	85318022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
WTC11_00053057	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.8604962188118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-85328015	True	NA	37	True	AATAAA	-20	NA	85328251	85318026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
WTC11_00053059	chr2	-	2328	8	FSM	ENSG00000042445.14	ENST00000429806.5	2335	8	0	7	0	-7	multi-exon	FALSE	canonical	2	4	junction_2	17.7119814169473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATTTATTTTGGTTT	-85350881	False	NA	-4	True	AATAAA	-25	NA	85350891	85342094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85343382_85343638_85343799_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779
WTC11_00053060	chr2	-	3008	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	133	0	0	multi-exon	TRUE	canonical	3	36	junction_4	6.99213844256534	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGTTTTTTGTTC	-85353903	True	NA	3	True	AATAAA	-32	NA	85354528	85342087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
WTC11_00053061	chr2	-	641	3	FSM	ENSG00000042493.16	ENST00000471064.1	486	3	-8	-147	-8	5	multi-exon	FALSE	canonical	3	673	junction_2	38	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGGCTGATTCTCAC	-85398342	False	NA	-4	True	AATAAA	-39	NA	85398360	85394747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85394959_85395537_85395627_85398019
WTC11_00053062	chr2	-	1255	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	-5	0	5	multi-exon	FALSE	canonical	3	139	junction_9	202.912132050633	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGGCTGATTCTCAC	-85410355	False	5105	-4	True	AATAAA	-39	NA	85410366	85394747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
WTC11_00053067	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	19.0194583497629	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	-85559843	True	NA	-4	True	AATAAA	-16	NA	85561493	85544719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
WTC11_00053068	chr2	-	7365	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	59	-5110	0	0	multi-exon	FALSE	canonical	3	61	junction_13	17.7830449133587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	-85559823	True	NA	-4	True	AATAAA	-16	NA	85561473	85544719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
WTC11_00053069	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	-85559843	True	NA	NA	False	NA	NA	NA	85561493	85558583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85559076_85561385
WTC11_00053070	chr2	-	669	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-12	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	7.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	-85559882	True	NA	-9	True	ATTAAA	-18	NA	85561532	85558724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85559076_85560814_85560986_85561385
WTC11_00053072	chr2	-	1409	6	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	43.2777078875488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85601468	False	NA	0	True	ATTAAA	-17	NA	85601482	85598546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601305
WTC11_00053073	chr2	-	1585	7	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	52.9465138921661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591360	False	11309	0	True	ATTAAA	-17	NA	85602669	85598546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601305_85601483_85601883_85602065_85602606
WTC11_00053074	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	21.0082588230322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591389	False	11309	0	True	ATTAAA	-17	NA	85602698	85598546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
WTC11_00053076	chr2	-	1396	6	NIC	ENSG00000168890.14	novel	1484	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	50.2593274925162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTGTAGCCTGTTCTG	-85591350	False	11309	-2	True	ATTAAA	-15	NA	85602659	85598548	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601883_85602065_85602606
WTC11_00053080	chr2	-	4252	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	34	-12	0	12	multi-exon	FALSE	canonical	3	202	junction_2	27.0102861065105	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTGTGAAATAACTTGT	-85600723	True	NA	2	True	AATAAA	-31	NA	85612032	85605241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
WTC11_00053081	chr2	-	4382	3	FSM	ENSG00000168887.11	ENST00000420686.5	1204	3	-142	-3036	-11	6	multi-exon	FALSE	canonical	3	202	junction_2	31.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAGAGTTGTGAAATA	-85600768	True	NA	-4	True	AATAAA	-25	NA	85612077	85605247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85609068_85609434_85609587_85611667
WTC11_00053085	chr2	-	2210	2	FSM	ENSG00000115525.18	ENST00000639472.1	3062	2	852	0	852	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTAAAAAGATGAAAAA	NA	False	NA	-56	True	AAGAAA	-44	NA	85845401	85839188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395
WTC11_00053088	chr2	-	12480	34	FSM	ENSG00000068654.17	ENST00000263857.11	12480	34	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_31	26.9660535502905	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTGGTTATTCTGAT	-86101595	True	NA	-12	True	AATAAA	-19	NA	86105886	86020215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031329_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
WTC11_00053089	chr2	-	352	2	FSM	ENSG00000068654.17	ENST00000483538.1	593	2	249	-8	249	8	multi-exon	FALSE	canonical	3	155	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGTGTGGAGTGGAGA	-86065438	False	NA	NA	False	NA	NA	NA	86065465	86054129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86054290_86065273
WTC11_00053090	chr2	-	2515	6	FSM	ENSG00000068654.17	ENST00000684026.1	3156	6	0	641	0	-641	multi-exon	FALSE	canonical	3	140	junction_3	27.4474042488538	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTATTACCAGTTGG	-86101599	True	NA	NA	False	ATTAAA	-17	NA	86105890	86086894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
WTC11_00053091	chr2	-	540	3	FSM	ENSG00000068654.17	ENST00000683470.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTGCCTGCAGGACC	-86100050	False	77	NA	False	NA	NA	NA	86100061	86089633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86089930_86098610_86098761_86099967
WTC11_00053093	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	125.086602652983	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86190734	True	NA	-7	True	AATAAA	-20	NA	86195472	86143931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053094	chr2	-	2631	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	-4	0	0	multi-exon	FALSE	canonical	3	127	junction_10	173.333052066752	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86195317	False	NA	-7	True	AATAAA	-20	NA	86195403	86143931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053095	chr2	-	2693	15	FSM	ENSG00000132305.22	ENST00000410111.8	2689	15	0	-4	0	0	multi-exon	FALSE	canonical	3	260	junction_11	133.922076032966	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86190724	True	NA	-7	True	AATAAA	-20	NA	86195462	86143931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053096	chr2	-	2773	14	NIC	ENSG00000132305.22	novel	2670	15	NA	NA	-118	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	200.903491800793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86195504	False	NA	-7	True	AATAAA	-20	NA	86195590	86143931	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053098	chr2	-	2682	14	NIC	ENSG00000132305.22	novel	2627	15	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	231.9106387786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATCTTATCCCTTTTC	-86190734	True	NA	-10	True	AATAAA	-17	NA	86195472	86143934	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053099	chr2	-	1431	10	FSM	ENSG00000132305.22	ENST00000474969.5	1431	10	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_6	147.621136697967	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATTCCATAATCCGTG	-86190697	True	NA	NA	False	NA	NA	NA	86195435	86158375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00053101	chr2	-	950	4	FSM	ENSG00000068615.20	ENST00000489855.2	958	4	0	8	0	-8	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGATGTTGTGGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	86282210	86251359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86252071_86254693_86254815_86263964_86264042_86282169
WTC11_00053102	chr2	-	3325	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	-48	-139	-12	139	multi-exon	FALSE	canonical	3	123	junction_2	6.88767014308903	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGATTGATTGACATT	-86561934	True	NA	NA	False	NA	NA	NA	86563491	86503290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
WTC11_00053105	chr2	-	760	1	FSM	ENSG00000231351.2	ENST00000418877.1	505	1	-179	-76	-179	76	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCAGGGGTGACCCC	NA	False	NA	NA	False	NA	NA	NA	86930933	86930173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86930200_86930900
WTC11_00053106	chr2	-	2220	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	-3	0	3	multi-exon	FALSE	canonical	3	135	junction_3	135.092708907624	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTGGTTTGATTC	-87073675	True	NA	NA	False	AATAAA	-23	NA	87076429	87030671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
WTC11_00053113	chr2	-	1808	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_2	6.18241233033047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTGTGTGTCAGTCT	-88054206	True	NA	-4	True	AATAAA	-17	NA	88055783	88027203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
WTC11_00053114	chr2	-	4956	2	FSM	ENSG00000214336.5	ENST00000428390.3	2841	2	-153	-1962	-153	1962	multi-exon	FALSE	canonical	3	33	junction_1	0	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTTCCTGGGTATT	NA	False	NA	-17	True	AATAAA	-16	NA	88452846	88444824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88448830_88451895
WTC11_00053115	chr2	-	4519	7	FSM	ENSG00000172071.15	ENST00000684740.1	4519	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	12.6315302143309	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTATGTTGACTCTTA	-88581568	False	NA	-7	True	AATAAA	-12	NA	88581581	88556745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517
WTC11_00053116	chr2	-	4537	17	FSM	ENSG00000172071.15	ENST00000303236.9	4536	17	0	-1	0	1	multi-exon	FALSE	canonical	3	77	junction_7	16.6901917304745	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGACTCTTATTTTGA	-88624043	True	NA	-1	True	AATAAA	-18	NA	88627464	88556739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591053_88593271_88593406_88595468_88595664_88613723_88613854_88626966
WTC11_00053118	chr2	-	3490	14	FSM	ENSG00000172071.15	ENST00000684455.1	3490	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	34.0365275417542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAAGTGTGTTAACTT	-88593281	True	NA	-71	True	TATAAA	-42	NA	88593295	88556809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591009_88593271
WTC11_00053120	chr2	-	2214	4	FSM	ENSG00000172071.15	ENST00000681996.1	2425	4	211	0	211	0	multi-exon	FALSE	canonical	3	85	junction_3	13.0979218029257	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTGGAATCTGTCACT	NA	False	NA	NA	False	NA	NA	NA	88595018	88588832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88588902_88590442_88590606_88590817_88591053_88593271
WTC11_00053121	chr2	-	1092	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	104	0	-104	multi-exon	FALSE	canonical	3	5	junction_1	9	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACAATGTGAACGTAC	NA	False	NA	NA	False	NA	NA	NA	89585615	89542945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_89543837_89581005_89581141_89585549
WTC11_00053124	chr2	-	1047	1	FSM	ENSG00000232531.3	ENST00000413684.1	1047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGGGCCCCGCGCCCTC	-91748975	False	NA	NA	False	NA	NA	NA	91748986	91747939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_91747900_91749000
WTC11_00053127	chr2	-	2797	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	-191	-1247	-177	-592	multi-exon	TRUE	canonical	3	113	junction_5	227.702788740059	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGTGGCAGAGTGAGAC	-95118653	True	NA	NA	False	NA	NA	NA	95121990	95085960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
WTC11_00053128	chr2	-	1078	5	FSM	ENSG00000144029.12	ENST00000461916.5	793	5	-285	0	-285	0	multi-exon	FALSE	canonical	3	716	junction_4	87.2478509763994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCACCTAGGAGAGAC	-95102198	False	NA	-73	True	NA	NA	NA	95102238	95087323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676
WTC11_00053131	chr2	-	3161	3	FSM	ENSG00000144026.12	ENST00000496060.1	5593	3	2432	0	2432	0	multi-exon	FALSE	canonical	3	10	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTACACATATACCAACC	-95153219	False	NA	-11	True	AATAAA	-18	NA	95153259	95147329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95150268_95152673_95152770_95153132
WTC11_00053132	chr2	-	2755	5	FSM	ENSG00000144026.12	ENST00000411425.1	2755	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.32290411644765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGGGTGCAGAGGAT	-95158591	False	NA	-101	True	NA	NA	NA	95159337	95148302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95150268_95152673_95152770_95153132_95153260_95157350_95157440_95158859
WTC11_00053135	chr2	-	3783	1	FSM	ENSG00000274286.2	ENST00000620793.2	3696	1	-135	48	-135	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAACTCTGAGCTAT	NA	False	NA	-4	True	NA	NA	NA	96116706	96112923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96112900_96116700
WTC11_00053136	chr2	-	1688	4	FSM	ENSG00000158050.5	ENST00000288943.5	1685	4	0	-3	0	3	multi-exon	FALSE	canonical	3	50	junction_3	9.97775303139718	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCATCTGGTCTCATCT	-96144488	True	NA	2	True	AATAAA	-27	NA	96145440	96143165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96144038_96144153_96144374_96144760_96144883_96144966
WTC11_00053137	chr2	-	773	2	FSM	ENSG00000158050.5	ENST00000488952.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGGGCTGCTACCTCC	-96144604	False	NA	NA	False	NA	NA	NA	96144617	96143728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96144038_96144153
WTC11_00053138	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_7	94.4887424457517	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192739	True	NA	-5	True	AATAAA	-26	NA	96208827	96184858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
WTC11_00053142	chr2	-	6931	47	NNC	ENSG00000144028.15	novel	7194	45	NA	NA	-359	58798	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	238.111306596143	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTAGCAGTGGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	96305905	96215539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96215574_96274736_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392_96305545_96305801
WTC11_00053145	chr2	-	3061	15	FSM	ENSG00000144028.15	ENST00000497539.5	2666	15	0	-395	0	2	multi-exon	FALSE	canonical	3	815	junction_14	149.434461096714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCGACTGTCTTCAAAT	-96284709	False	NA	1	True	AATAAA	-19	NA	96284723	96274335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357
WTC11_00053146	chr2	-	7196	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	-2	0	2	multi-exon	FALSE	canonical	3	586	junction_38	166.881142131679	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCGACTGTCTTCAAAT	-96272633	True	NA	1	True	AATAAA	-19	NA	96305546	96274335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
WTC11_00053150	chr2	-	3383	3	FSM	ENSG00000144028.15	ENST00000480242.1	3409	3	0	26	0	-26	multi-exon	FALSE	canonical	3	832	junction_1	43	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGAGTGAGACTC	-96284860	False	NA	NA	False	NA	NA	NA	96284874	96281210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96283353_96283534_96283714_96283812
WTC11_00053153	chr2	-	5268	22	NNC	ENSG00000114982.19	novel	5253	21	NA	NA	0	57033	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.0138547287888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGGTGGTTAGTGTGA	-96635799	True	NA	NA	False	NA	NA	NA	96638331	96536136	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96536169_96593171_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
WTC11_00053154	chr2	-	5158	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	-2	0	0	multi-exon	FALSE	canonical	3	53	junction_20	23.3861069868416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-96635780	True	NA	-13	True	ATTAAA	-17	NA	96638312	96593169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
WTC11_00053155	chr2	-	5253	21	FSM	ENSG00000114982.19	ENST00000354204.10	5253	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_19	26.8735929864244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-96635814	True	NA	-13	True	ATTAAA	-17	NA	96638346	96593169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
WTC11_00053156	chr2	-	5199	21	NIC	ENSG00000114982.19	novel	5156	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	33.0718535918385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-96635829	True	NA	-15	True	ATTAAA	-15	NA	96638361	96593171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604858_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
WTC11_00053169	chr2	-	3847	16	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	-185	94694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.9512839355935	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCCAACACCAGACTCC	-96870217	True	NA	NA	False	NA	NA	NA	96870265	96765023	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96765056_96859742_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869875
WTC11_00053170	chr2	-	4965	9	FSM	ENSG00000213337.9	ENST00000443120.5	4965	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	142.787374704488	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAGTTTGAGACCAGG	-96855010	True	NA	NA	False	NA	NA	NA	96858014	96836610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96840096_96840231_96840331_96840415_96840913_96842059_96842186_96842364_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
WTC11_00053172	chr2	-	857	8	FSM	ENSG00000163126.15	ENST00000462692.1	857	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	10.1760021820046	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCCCGACTGCCTGGAG	-96854930	True	NA	NA	False	NA	NA	NA	96857934	96840058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96840096_96840231_96840331_96840415_96840515_96840786_96840913_96842059_96842186_96842364_96842512_96848268_96848445_96857887
WTC11_00053173	chr2	-	893	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	-1	0	1	multi-exon	FALSE	canonical	3	293	junction_3	24.5266295188629	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTATGTAAGTATTAGA	-96855012	True	NA	-4	True	ATTAAA	-20	NA	96858016	96847988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
WTC11_00053174	chr2	-	2641	2	FSM	ENSG00000168758.11	ENST00000474420.1	2625	2	0	-16	0	-2	multi-exon	FALSE	canonical	3	353	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	-96862414	False	NA	0	True	AATAAA	-35	NA	96862447	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861650_96861736
WTC11_00053176	chr2	-	3798	13	FSM	ENSG00000168758.11	ENST00000482925.5	3776	13	0	-22	0	-2	multi-exon	FALSE	canonical	3	224	junction_8	41.9651806726587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	-96866897	False	NA	0	True	AATAAA	-35	NA	96866930	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282
WTC11_00053177	chr2	-	3322	14	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	159	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	83.1915875355579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATTGCTCTGATGGG	-96869888	False	NA	-23	True	AATAAA	-12	NA	96869921	96859742	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96869875
WTC11_00053178	chr2	-	3650	15	FSM	ENSG00000168758.11	ENST00000305476.10	3652	15	0	2	0	-2	multi-exon	FALSE	canonical	3	78	junction_14	64.3714111343582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	-96868972	True	NA	0	True	AATAAA	-35	NA	96870080	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869875
WTC11_00053180	chr2	-	1295	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	12	-2	3	2	multi-exon	FALSE	canonical	3	79	junction_7	105.762151325799	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTGCTGTTTGTCT	-97093007	True	NA	-22	True	AATAAA	-23	NA	97094870	97083580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
WTC11_00053181	chr2	-	1381	9	NNC	ENSG00000144199.12	novel	1431	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	114.906959645619	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97092972	True	NA	-24	True	AATAAA	-21	NA	97094835	97083582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091986_97094700
WTC11_00053184	chr2	-	257	2	FSM	ENSG00000196912.13	ENST00000615794.1	258	2	0	1	0	-1	multi-exon	FALSE	canonical	3	36	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCTCTCAATTGCTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	97507719	97506964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97507066_97507563
WTC11_00053186	chr2	-	2194	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	10	0	-10	multi-exon	TRUE	canonical	3	102	junction_6	20.2829978060444	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGGCTCTCTGTGCT	-97662152	True	NA	-10	True	NA	NA	NA	97664044	97655948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
WTC11_00053188	chr2	-	6703	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	-2	0	-1	multi-exon	FALSE	canonical	3	52	junction_20	9.19116423528597	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTGTGGTTTTTTTT	-97993293	True	NA	0	True	AATAAA	-20	NA	97995948	97756333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
WTC11_00053189	chr2	-	1802	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	5	-37	0	37	multi-exon	FALSE	canonical	3	484	junction_2	58.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAACCATCACCACTAA	-98603055	True	NA	NA	False	NA	NA	NA	98608507	98599276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_98600794_98604107_98604192_98608306
WTC11_00053190	chr2	-	1854	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	-8	-1076	0	37	multi-exon	FALSE	canonical	0	0	junction_2	300.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAACCATCACCACTAA	-98603063	True	NA	NA	False	NA	NA	NA	98608515	98599276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_98600794_98604107_98604192_98608262
WTC11_00053193	chr2	-	587	5	FSM	ENSG00000135951.16	ENST00000489926.6	588	5	1	0	1	0	multi-exon	FALSE	canonical	2	5	junction_1	4.26468052730799	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAACTGCCCGGGTAGGT	-99140727	True	NA	NA	False	NA	NA	NA	99141148	99109402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99109513_99110849_99110916_99117543_99117760_99127047_99127177_99141082
WTC11_00053194	chr2	-	710	2	FSM	ENSG00000135951.16	ENST00000498097.5	431	2	-283	4	23	-3	multi-exon	FALSE	canonical	3	9	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGGTTTCTCTTTTT	-99154783	True	NA	-4	True	AATAAA	-12	NA	99154919	99148267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154290
WTC11_00053195	chr2	-	391	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	-1	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154725	True	NA	0	True	AATAAA	-16	NA	99154861	99148263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154290_99154428_99154692
WTC11_00053197	chr2	-	1278	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	72	-267	0	267	multi-exon	FALSE	canonical	3	15	junction_5	132.091403538947	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACCTGTATCAGAAA	-99180708	False	NA	NA	False	TTTAAA	-16	NA	99180962	99168995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
WTC11_00053198	chr2	-	714	2	FSM	ENSG00000158411.11	ENST00000483721.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATGGATCCATCATT	-99170880	False	NA	-17	True	AATAAA	-16	NA	99170905	99169265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169611_99170536
WTC11_00053201	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	90.3026023988235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-99179125	True	NA	1	True	NA	NA	NA	99181050	99169444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
WTC11_00053203	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	76.6138858171285	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	-99328218	True	NA	44	True	CATAAA	-20	NA	99336333	99318981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
WTC11_00053205	chr2	-	1175	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	-64	0	-12	0	multi-exon	FALSE	canonical	3	566	junction_3	15.1070255914995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	-99328282	True	NA	-2	True	AATAAA	-28	NA	99336397	99321533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
WTC11_00053206	chr2	-	1223	4	FSM	ENSG00000115514.12	ENST00000463385.5	1099	4	-97	-27	-22	0	multi-exon	FALSE	canonical	3	13	junction_2	269.830811188542	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	-99328292	True	NA	-2	True	AATAAA	-28	NA	99336407	99321533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99322210_99327534_99327654_99332983_99333243_99336238
WTC11_00053208	chr2	-	4686	23	FSM	ENSG00000135945.10	ENST00000393445.7	4686	23	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_15	28.3636727855244	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGTGGATATTTGGAAC	-99487639	True	NA	-4	True	AATAAA	-18	NA	99489973	99400474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
WTC11_00053209	chr2	-	4733	23	FSM	ENSG00000135945.10	ENST00000258428.8	4731	23	0	-2	0	0	multi-exon	FALSE	canonical	3	35	junction_15	32.9506267262535	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGTGGATATTTGGAAC	-99487683	True	NA	-4	True	AATAAA	-18	NA	99490017	99400474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429949_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
WTC11_00053210	chr2	-	3261	19	NNC	ENSG00000135945.10	novel	4731	23	NA	NA	6	16	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	48.4807776594924	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTGTGAATCCTTAAAA	NA	False	NA	2	True	AATAAA	-29	NA	99438811	99400933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429949_99431740_99431941_99434331_99434449_99435833_99435942_99438600
WTC11_00053220	chr2	-	2878	8	NNC	ENSG00000115526.11	novel	2854	7	NA	NA	0	9268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.0233398528532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTCATTTTTACTGCT	-100416034	True	NA	NA	False	AAAAAG	-15	NA	100417668	100382591	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_100382621_100391864_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
WTC11_00053221	chr2	-	2894	8	NNC	ENSG00000115526.11	novel	2854	7	NA	NA	-10	9268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.0233398528532	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTCATTTTTACTGCT	-100416044	True	NA	NA	False	AAAAAG	-15	NA	100417678	100382591	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_100382622_100391859_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
WTC11_00053222	chr2	-	2748	6	NIC	ENSG00000115526.11	novel	2854	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	70.0325638542528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100416020	True	NA	-4	True	AATAAA	-20	NA	100417654	100391859	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_100393783_100395508_100395615_100397907_100398143_100406575_100406708_100415040_100415112_100417373
WTC11_00053223	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	31.3408678884296	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100416034	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
WTC11_00053230	chr2	-	4016	20	FSM	ENSG00000204634.13	ENST00000376840.8	3627	20	0	-389	0	0	multi-exon	FALSE	canonical	3	84	junction_10	16.1773412893199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTTTTCTTTTACC	-101149214	False	NA	-6	True	AAGAAA	-14	NA	101151253	101007227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
WTC11_00053231	chr2	-	4211	20	FSM	ENSG00000204634.13	ENST00000409318.2	4190	20	0	-21	0	21	multi-exon	FALSE	canonical	3	9	junction_18	29.8809271290933	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAAGTGTCTTAAGC	-101149343	True	NA	15	True	AAGAAA	-35	NA	101151382	101007206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090208_101090365_101151126
WTC11_00053234	chr2	-	754	2	FSM	ENSG00000163162.9	ENST00000485752.1	621	2	-113	-20	-113	20	multi-exon	FALSE	canonical	3	25	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACTTACGAAGTCCCT	-101273034	False	NA	-4	True	AATAAA	-42	NA	101273049	101271198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101271745_101272841
WTC11_00053235	chr2	-	954	2	ISM	ENSG00000163162.9	ENST00000424632.5	2010	8	35167	-23	-598	20	3prime_fragment	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACTTACGAAGTCCCT	-101273519	False	NA	-4	True	AATAAA	-42	NA	101273534	101271198	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_101271745_101273126
WTC11_00053237	chr2	-	3097	7	FSM	ENSG00000163162.9	ENST00000295317.4	2953	7	0	-144	0	144	multi-exon	FALSE	canonical	3	91	junction_3	24.8243831746128	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-101305664	True	NA	NA	False	NA	NA	NA	101308701	101275456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101277282_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
WTC11_00053238	chr2	-	622	2	FSM	ENSG00000163162.9	ENST00000463726.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGGTGTGCAAATTAT	NA	False	NA	NA	False	TTTAAA	-32	NA	101286503	101281858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101282058_101286080
WTC11_00053240	chr2	-	1555	2	FSM	ENSG00000163162.9	ENST00000478404.1	997	2	-113	-445	-113	445	multi-exon	FALSE	canonical	3	99	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101294775	101288262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101289056_101294013
WTC11_00053241	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14.2211110677049	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-102735401	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
WTC11_00053242	chr2	-	5368	7	FSM	ENSG00000135953.11	ENST00000438943.5	2990	7	0	-2378	0	-30	multi-exon	FALSE	canonical	3	23	junction_5	31.987844913689	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTCAAAAATAAAACTTT	-102735391	True	NA	-35	True	NA	NA	NA	102736878	102714659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
WTC11_00053243	chr2	-	1183	7	FSM	ENSG00000135953.11	ENST00000411991.5	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	37.1786228900426	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAAGCACAACTCGC	-102735391	True	NA	NA	False	NA	NA	NA	102736878	102718813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
WTC11_00053244	chr2	-	548	4	FSM	ENSG00000135953.11	ENST00000421966.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	44.6492503358741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGGGCTATCTCCT	-102735401	True	NA	NA	False	NA	NA	NA	102736888	102726917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102726975_102731024_102731069_102732321_102732410_102736529
WTC11_00053245	chr2	-	299	2	FSM	ENSG00000135953.11	ENST00000462099.1	335	2	0	36	0	-36	multi-exon	FALSE	canonical	2	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGATATTGCTC	-102735352	True	NA	NA	False	NA	NA	NA	102736839	102732321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102732427_102736645
WTC11_00053250	chr2	-	1548	7	NNC	ENSG00000115641.19	novel	1582	7	NA	NA	0	57277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.1245915016974	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTACTCCATTATCCTA	-105396096	True	NA	NA	False	NA	NA	NA	105399050	105300434	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_105300457_105360829_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
WTC11_00053251	chr2	-	3449	1	FSM	ENSG00000272994.1	ENST00000610036.1	3449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTTGATAATGTAAT	-105336881	True	NA	1	True	AATATA	-22	NA	105337475	105334026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105334000_105337500
WTC11_00053253	chr2	-	1596	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	-14	0	0	multi-exon	FALSE	canonical	3	28	junction_6	48.5855488345615	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396097	True	NA	-1	True	AATAAA	-31	NA	105399051	105360811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
WTC11_00053254	chr2	-	1545	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	-14	0	0	multi-exon	FALSE	canonical	3	53	junction_5	33.1264244976726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396097	True	NA	-1	True	AATAAA	-31	NA	105399051	105360811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
WTC11_00053255	chr2	-	1460	6	FSM	ENSG00000115641.19	ENST00000358129.8	1578	6	134	-16	-29	0	multi-exon	FALSE	canonical	0	0	junction_3	56.1412504313896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	NA	False	NA	-1	True	AATAAA	-31	NA	105399090	105360811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105386360_105386541_105396646_105396698_105398841
WTC11_00053256	chr2	-	1416	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	-49	0	0	multi-exon	FALSE	canonical	3	52	junction_5	33.5141761050455	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396096	True	NA	-1	True	AATAAA	-31	NA	105399050	105360811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
WTC11_00053257	chr2	-	2344	15	FSM	ENSG00000115652.15	ENST00000283148.12	2053	15	-85	-206	-85	203	multi-exon	FALSE	canonical	3	113	junction_13	68.3359423759427	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCAGATCTTAGCCAG	-106187949	True	NA	NA	False	NA	NA	NA	106194386	106093104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
WTC11_00053258	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	33.8846332036653	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	-106187862	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
WTC11_00053260	chr2	-	1615	2	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	43896	12444	43809	-12444	internal_fragment	FALSE	canonical	3	51	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATCAGAAAACCTGGC	NA	False	NA	NA	False	AATAGA	-35	NA	106424517	106415849	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106415990_106423042
WTC11_00053261	chr2	-	350	2	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	31564	33011	31477	-33011	internal_fragment	FALSE	canonical	3	49	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTGTAAGTAGTAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106436849	106436416	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106436590_106436672
WTC11_00053262	chr2	-	7279	6	FSM	ENSG00000144057.16	ENST00000409382.8	6800	6	-479	0	461	0	multi-exon	FALSE	canonical	3	10	junction_5	4.81663783151692	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	-106885859	False	787	-1	True	AATAAA	-23	NA	106886646	106801599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886092
WTC11_00053265	chr2	-	283	1	FSM	ENSG00000259863.1	ENST00000567491.1	1604	1	263	1058	263	-1058	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGTGCGAGGGGCTCTA	NA	False	NA	NA	False	NA	NA	NA	109128667	109128384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109128400_109128700
WTC11_00053274	chr2	-	2458	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	6	58	0	3	multi-exon	FALSE	canonical	0	0	junction_12	26.6495674633451	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGTATCCAAAATATTTAA	-110204980	False	8723	NA	False	GATAAA	-4	NA	110205007	110123405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
WTC11_00053275	chr2	-	739	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	3	0	-3	multi-exon	FALSE	canonical	3	60	junction_1	14.7044966667418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGAGTGTGGTGACT	-110204972	False	8723	0	True	CATAAA	-22	NA	110204999	110178043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
WTC11_00053280	chr2	-	834	8	ISM	ENSG00000256671.7	ENST00000632758.1	1580	9	4621	467	4577	-467	3prime_fragment	FALSE	canonical	0	0	junction_4	23.5900359456777	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACACTAAATTAACACTC	NA	False	NA	NA	False	NA	NA	NA	110468239	110447106	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_110447161_110449818_110449868_110451160_110451254_110451863_110452019_110454850_110455001_110455434_110455556_110457029_110457097_110468094
WTC11_00053285	chr2	-	1891	12	FSM	ENSG00000169679.15	ENST00000671097.1	1891	12	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	328.87107172596	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTTGTTATAAATATTT	-110657543	False	30	-3	True	AATAAA	-24	NA	110657621	110637831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641845_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545
WTC11_00053291	chr2	-	2044	1	FSM	ENSG00000172965.17	ENST00000371162.4	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	111239047	111237003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111237000_111239000
WTC11_00053292	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-111494933	True	NA	2	True	ATTAAA	-23	NA	111495086	111429308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111429621_111494884
WTC11_00053293	chr2	-	5066	37	FSM	ENSG00000153107.13	ENST00000427997.5	5047	37	0	-19	0	19	multi-exon	FALSE	canonical	2	4	junction_1	108.200556096104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGTCCTTAACTCTT	-111856814	False	NA	-21	True	AATAAA	-10	NA	111856847	111766251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111766996_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795
WTC11_00053294	chr2	-	7765	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	-3	0	3	multi-exon	TRUE	canonical	3	322	junction_42	77.2565936246739	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTTGCACACATATTAA	-111876534	True	NA	0	True	AATAAA	-21	NA	111884193	111767636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
WTC11_00053295	chr2	-	2369	7	FSM	ENSG00000153107.13	ENST00000485325.1	2369	7	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_6	36.9188298839495	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTTTTCCTCCAC	-111821703	False	NA	NA	False	AATAGA	-43	NA	111821756	111802532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238
WTC11_00053298	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	59	junction_3	13.3510299228187	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-112253820	True	NA	0	True	AATAAA	-32	NA	112255087	112215864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
WTC11_00053300	chr2	-	7315	23	FSM	ENSG00000169629.12	ENST00000302558.8	7299	23	-16	0	-16	0	multi-exon	FALSE	canonical	3	61	junction_1	44.9066985008688	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	-112433459	True	NA	NA	False	ATTAAA	-34	NA	112433661	112368368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683_112417915_112421959_112422113_112422547_112422660_112424239_112424308_112433381
WTC11_00053301	chr2	-	514	1	FSM	ENSG00000231747.1	ENST00000443291.1	359	1	-111	-44	-111	44	mono-exon	FALSE	NA	NA	NA	NA	NA	693	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGTGCCTGATGACA	NA	False	NA	-1	True	AATAAA	-27	NA	112622278	112621764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112621800_112622300
WTC11_00053303	chr2	-	2698	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	-1960	0	778	multi-exon	FALSE	canonical	3	53	junction_2	9.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTGTCAGCCCATTAAA	-113625953	True	NA	NA	False	NA	NA	NA	113627090	113609723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113612248_113625608_113625730_113627037
WTC11_00053305	chr2	-	10310	16	FSM	ENSG00000115084.15	ENST00000245680.7	10314	16	4	0	4	0	multi-exon	TRUE	canonical	3	54	junction_7	10.2683981223947	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTCTCTAAGATGT	-113753980	True	NA	53	True	ATTAAA	-26	NA	113756638	113706708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
WTC11_00053306	chr2	-	744	4	FSM	ENSG00000115084.15	ENST00000459683.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7.58653778449403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAATGATCAGAAAGTTT	-113725461	True	NA	NA	False	AGTAAA	-38	NA	113725477	113717452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113717851_113719153_113719309_113723103_113723195_113725377
WTC11_00053308	chr2	-	1711	7	FSM	ENSG00000115084.15	ENST00000498768.1	1711	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	10.5672449894316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTATAAAATTTTTTTAA	-113753929	True	NA	NA	False	AATGAA	-25	NA	113756587	113741908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
WTC11_00053309	chr2	-	771	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	-41	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-115161322	True	NA	0	True	AATAAA	-15	NA	115161384	115144047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_115144369_115144858_115145028_115161103
WTC11_00053311	chr2	-	6927	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	-91	-3	-28	0	multi-exon	FALSE	canonical	3	63	junction_5	11.5211648749427	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACTCTTTCTTGGGTC	-118012228	True	NA	7	True	GATAAA	-19	NA	118014161	117915477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
WTC11_00053317	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.2520268049763	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366460	True	NA	-13	True	AATAAA	-17	NA	119366834	119302224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
WTC11_00053318	chr2	-	5922	1	FSM	ENSG00000226479.4	ENST00000426077.3	5922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTAACTTCTAAGAT	-120222299	True	NA	-8	True	AATAAA	-16	NA	120223400	120217478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_120217500_120223400
WTC11_00053319	chr2	-	9297	15	FSM	ENSG00000115112.8	ENST00000263707.6	9287	15	-12	2	-12	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.65008578587574	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTGGCTCAGGCCT	-121284635	True	NA	74	True	AATAAA	-17	NA	121285214	121216588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121224388_121225561_121225614_121231825_121231969_121234090_121234195_121235220_121235312_121237622_121237717_121237801_121237851_121239557_121239650_121242358_121242470_121246817_121246971_121248163_121248271_121248981_121249088_121249570_121249648_121281119_121281272_121285047
WTC11_00053329	chr2	-	1710	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	-24	0	24	multi-exon	FALSE	canonical	3	697	junction_3	58.1138728895452	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCTGAG	-121727080	True	NA	54	True	ATTAAA	-40	NA	121736875	121726920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
WTC11_00053331	chr2	-	5151	5	FSM	ENSG00000136717.15	ENST00000462958.5	5141	5	0	-10	0	4	multi-exon	FALSE	canonical	3	6	junction_4	92.8826544624991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATTTGTTCTCCCTCT	-127056481	False	NA	-5	True	GATAAA	-18	NA	127056491	127048022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254
WTC11_00053332	chr2	-	2340	16	NIC	ENSG00000136717.15	novel	2487	19	NA	NA	7	-18	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	57.8731947162645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATGATAAAAACT	-127107124	True	NA	-38	True	AATAAA	-28	NA	127107271	127048055	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00053334	chr2	-	2158	14	FSM	ENSG00000136717.15	ENST00000409400.1	2143	14	0	-15	0	4	multi-exon	FALSE	canonical	3	97	junction_8	39.7579957348465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATTTGTTCTCCCTCT	-127107265	False	NA	-5	True	GATAAA	-18	NA	127107278	127048022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00053335	chr2	-	2321	15	FSM	ENSG00000136717.15	ENST00000393040.7	2293	15	-18	-10	-18	10	multi-exon	FALSE	canonical	3	39	junction_4	58.2401782908238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTCCCTCTTCTTGT	-127107293	False	NA	1	True	GATAAA	-24	NA	127107306	127048016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00053337	chr2	-	5082	9	FSM	ENSG00000186684.14	ENST00000664447.2	5082	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	4.07546009672528	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGATCAATAATCTCATC	-127220005	True	NA	NA	False	AATAAA	-21	NA	127220299	127183831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127205899_127206091_127219988
WTC11_00053338	chr2	-	3305	10	FSM	ENSG00000163161.14	ENST00000646042.1	3390	10	85	0	85	0	multi-exon	FALSE	canonical	3	253	junction_3	28.0871659105879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127285783	False	NA	-4	True	AATAAA	-23	NA	127290808	127257289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336
WTC11_00053339	chr2	-	2916	15	FSM	ENSG00000163161.14	ENST00000426778.5	2916	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	101.202892795631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127289120	True	NA	-4	True	AATAAA	-23	NA	127294145	127257289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127293856
WTC11_00053351	chr2	-	11360	17	FSM	ENSG00000169967.17	ENST00000682094.1	11360	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_16	6.72216482987438	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTCCAAATCTATT	-127385889	True	NA	1	True	AATAAA	-24	NA	127387975	127298667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127307805_127308584_127308763_127314753_127314884_127317628_127317761_127318168_127318318_127322045_127322253_127323901_127323995_127324173_127324242_127325727_127325808_127326686_127326818_127329920_127330009_127330391_127330506_127335869_127335970_127337737_127337779_127338931_127339051_127343125_127343195_127387451
WTC11_00053353	chr2	-	2997	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	-24	0	22	multi-exon	FALSE	canonical	3	428	junction_12	48.5418138547345	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATACATTCTTAAT	-127520590	True	NA	15	True	AATAAA	-39	NA	127526489	127480787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
WTC11_00053355	chr2	-	1137	2	FSM	ENSG00000072163.20	ENST00000494613.5	1137	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	NA	False	NA	-4	True	AATGAA	-16	NA	127640403	127638425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640269
WTC11_00053356	chr2	-	2025	10	FSM	ENSG00000072163.20	ENST00000324938.9	2111	10	86	0	-8	0	multi-exon	TRUE	canonical	2	3	junction_9	3.22413736189931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-127664412	True	NA	-4	True	AATGAA	-16	NA	127664460	127638425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127664305
WTC11_00053357	chr2	-	1948	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	439	0	11	0	multi-exon	FALSE	canonical	1	3	junction_9	3.22413736189931	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-127675010	True	NA	-4	True	AATGAA	-16	NA	127675091	127638425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
WTC11_00053359	chr2	-	3254	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	-95	-55	-79	55	multi-exon	FALSE	canonical	3	278	junction_5	23.9115035077261	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTTCGATTATTTTAG	NA	False	NA	15	True	AATAAA	-41	NA	127811266	127762477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
WTC11_00053361	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_3	41.4085337420521	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-127848352	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
WTC11_00053362	chr2	-	1821	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	-2	-61	0	61	multi-exon	FALSE	canonical	3	162	junction_1	396	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCAGGCTTGAAGTTCT	-127848316	True	NA	21	True	AATAAA	-44	NA	127858119	127846637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127848186_127852924_127853106_127858027
WTC11_00053363	chr2	-	1711	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	137	junction_2	448.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	-127848352	True	NA	-40	True	AAGAAA	-5	NA	127858155	127846698	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127848186_127850589_127850686_127858027
WTC11_00053366	chr2	-	5391	8	FSM	ENSG00000144233.11	ENST00000272647.10	4692	8	-651	-48	-640	48	multi-exon	FALSE	canonical	3	51	junction_4	10.3706808073609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGTGATAACAGTTGT	NA	False	NA	NA	False	NA	NA	NA	127886607	127861581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
WTC11_00053367	chr2	-	4364	5	FSM	ENSG00000144233.11	ENST00000679574.1	4349	5	0	-15	0	0	multi-exon	FALSE	canonical	3	10	junction_2	27.7972570589258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	-127885818	False	202	NA	False	AATAAA	-17	NA	127885945	127861629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127865206_127866899_127866997_127873827_127874273_127884202_127884313_127885809
WTC11_00053369	chr2	-	4055	21	NNC	ENSG00000136715.19	novel	4140	21	NA	NA	15	34078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.0433760581926	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGAGCATGGCGGTGTG	-128022364	True	NA	NA	False	ACTAAA	-41	NA	128028105	127907138	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127907174_127941223_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000452_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00053370	chr2	-	4069	20	FSM	ENSG00000136715.19	ENST00000259235.7	4065	20	0	-4	0	3	multi-exon	TRUE	canonical	2	44	junction_19	43.6209434056751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATCTTTTTGTAAAG	-128021552	False	5741	1	True	AATAAA	-30	NA	128027293	127941213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
WTC11_00053371	chr2	-	4176	21	FSM	ENSG00000136715.19	ENST00000357702.9	4173	21	0	-3	0	3	multi-exon	FALSE	canonical	2	44	junction_20	36.7203962396922	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATCTTTTTGTAAAG	-128021554	False	5741	1	True	AATAAA	-30	NA	128027295	127941213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
WTC11_00053372	chr2	-	4092	21	FSM	ENSG00000136715.19	ENST00000643581.2	4084	21	0	-8	0	3	multi-exon	FALSE	canonical	2	114	junction_15	23.1915394055677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATCTTTTTGTAAAG	-128022318	True	NA	1	True	AATAAA	-30	NA	128028059	127941213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00053373	chr2	-	4140	21	FSM	ENSG00000136715.19	ENST00000259234.10	4140	21	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_8	40.7527913154424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCGCAGTTTGCATCT	-128022379	False	NA	-9	True	AATAAA	-20	NA	128028120	127941223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986960_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00053376	chr2	-	4223	2	FSM	ENSG00000136720.7	ENST00000259241.7	4223	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGTGTGCTGTGGTC	-128315193	True	NA	-32	True	AATAAA	-13	NA	128318868	128265479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_128268871_128318036
WTC11_00053381	chr2	-	3385	4	FSM	ENSG00000152076.19	ENST00000496704.1	3385	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5.24933858267454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130143015	False	NA	NA	False	AATAAA	-17	NA	130143028	130139286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178
WTC11_00053384	chr2	-	1549	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	16.4564980032391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130145103	False	NA	NA	False	AATAAA	-17	NA	130145134	130139286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
WTC11_00053386	chr2	-	4311	7	FSM	ENSG00000136699.20	ENST00000482171.5	4298	7	0	-13	0	-4	multi-exon	FALSE	canonical	3	543	junction_5	76.1000803036516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTCAGTCTCTAGGAG	-130157927	False	NA	NA	False	AATAAA	-30	NA	130157953	130151395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130155260_130156034_130156676_130157250
WTC11_00053387	chr2	-	3384	15	FSM	ENSG00000136699.20	ENST00000439886.5	3371	15	0	-13	0	-4	multi-exon	FALSE	canonical	3	8	junction_8	267.748282640884	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTCAGTCTCTAGGAG	-130172830	False	NA	NA	False	AATAAA	-30	NA	130172843	130151395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156814_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786
WTC11_00053389	chr2	-	3673	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	-12	0	-4	multi-exon	TRUE	canonical	3	543	junction_6	63.3448576259693	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTCAGTCTCTAGGAG	-130168306	True	NA	NA	False	AATAAA	-30	NA	130181601	130151395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
WTC11_00053390	chr2	-	4909	20	FSM	ENSG00000136699.20	ENST00000409031.5	4896	20	0	-13	0	-4	multi-exon	FALSE	canonical	3	24	junction_9	202.596456286192	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTCAGTCTCTAGGAG	NA	False	NA	NA	False	AATAAA	-30	NA	130182750	130151395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
WTC11_00053392	chr2	-	593	3	FSM	ENSG00000136699.20	ENST00000491319.2	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_2	47	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCTATGAGATCGCCA	-130153932	False	NA	NA	False	NA	NA	NA	130154100	130153109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130153172_130153318_130153451_130153701
WTC11_00053402	chr2	-	363	1	FSM	ENSG00000230756.1	ENST00000437982.1	621	1	269	-11	269	11	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCCAAGGAAACTGGCC	NA	False	NA	NA	False	TATAAA	-31	NA	130213221	130212858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130212900_130213200
WTC11_00053403	chr2	-	3568	2	FSM	ENSG00000136710.10	ENST00000465315.1	3562	2	0	-6	0	2	multi-exon	FALSE	canonical	3	50	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTTTTTTGATCAT	-130338956	True	NA	2	True	AGTAAA	-23	NA	130342135	130338240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130339559
WTC11_00053405	chr2	-	2581	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	-524	-210	-174	-100	multi-exon	FALSE	canonical	3	28	junction_2	117.589115142516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGCTAACTCCCA	NA	False	NA	NA	False	NA	NA	NA	130342873	130338032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
WTC11_00053408	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	47.5067246701863	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427969	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
WTC11_00053410	chr2	-	3277	3	NIC	ENSG00000178162.8	novel	2070	4	NA	NA	-245	0	intron_retention	FALSE	canonical	3	44	junction_2	58	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130428404	False	NA	NA	False	AATAAA	-14	NA	130428421	130416754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130419246_130425090_130425159_130427703
WTC11_00053411	chr2	-	5018	2	FSM	ENSG00000178162.8	ENST00000430785.1	3992	2	2126	-3152	0	2479	multi-exon	FALSE	canonical	3	160	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTATTTGGGAATCA	-130425121	False	NA	NA	False	AATAAA	-18	NA	130425138	130414275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130419246_130425090
WTC11_00053414	chr2	-	5437	7	FSM	ENSG00000152102.18	ENST00000389915.4	5435	7	0	-2	0	2	multi-exon	FALSE	canonical	3	285	junction_6	44.3946943776944	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTTTCATGATTTCT	-131085484	True	NA	-11	True	AATAAA	-20	NA	131093460	131047873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093213
WTC11_00053415	chr2	-	5371	7	FSM	ENSG00000152102.18	ENST00000409185.5	5285	7	-84	-2	-52	2	multi-exon	FALSE	canonical	3	21	junction_6	133.896311458614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTTTCATGATTTCT	-131093499	False	NA	-11	True	AATAAA	-20	NA	131093512	131047873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093331
WTC11_00053418	chr2	-	1375	1	FSM	ENSG00000217950.4	ENST00000407594.2	1944	1	550	19	550	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTCAGAGGAGGACT	NA	False	NA	NA	False	NA	NA	NA	131444037	131442662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131442700_131444000
WTC11_00053420	chr2	-	604	4	NNC	ENSG00000173272.16	novel	599	3	NA	NA	0	2163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	757.891959465346	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTCAAAGCTGGGTGC	-131483459	True	NA	NA	False	AAAAAG	-9	NA	131492376	131467645	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131467686_131483973_131484219_131491875_131492025_131492206
WTC11_00053421	chr2	-	539	4	NNC	ENSG00000173272.16	novel	599	3	NA	NA	35	2160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	757.891959465346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACTGTCAAAGCTGGG	-131492287	False	NA	NA	False	AAAAAG	-6	NA	131492300	131467648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131467686_131483959_131484219_131491875_131492025_131492206
WTC11_00053423	chr2	-	1192	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	21	-614	0	612	multi-exon	FALSE	canonical	3	1579	junction_1	28	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCGGTTAATACTCTTT	-131483459	True	NA	NA	False	NA	NA	NA	131492376	131483345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131484219_131491875_131492025_131492206
WTC11_00053424	chr2	-	2826	2	FSM	ENSG00000173272.16	ENST00000491265.1	2826	2	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCAGGTGGGCGTGGTG	-131483459	True	NA	NA	False	NA	NA	NA	131492376	131489368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131492025_131492206
WTC11_00053425	chr2	-	1027	1	FSM	ENSG00000213222.3	ENST00000448659.1	1027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCCATCCCTGGTCAG	NA	False	NA	NA	False	NA	NA	NA	131724279	131723252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131723300_131724300
WTC11_00053428	chr2	-	3532	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	-22	0	22	multi-exon	FALSE	canonical	1	1	junction_2	5.71547606649408	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATATTCTGCAGTTATT	-134918353	True	NA	NA	False	AATAAA	-20	NA	134918710	134864577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
WTC11_00053430	chr2	-	6712	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	16.6669583307813	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-135530126	True	NA	0	True	ATTAAA	-22	NA	135531218	135196968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
WTC11_00053432	chr2	-	838	4	FSM	ENSG00000121988.18	ENST00000472452.1	823	4	0	-15	0	15	multi-exon	FALSE	canonical	3	32	junction_1	16.2685791225499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCTTTGTTTTTATTT	NA	False	NA	-3	True	AATAAA	-24	NA	135353628	135345120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449
WTC11_00053433	chr2	-	1102	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	18.288581744417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135530126	True	NA	-18	True	AATAAA	-9	NA	135531218	135345135	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
WTC11_00053434	chr2	-	2962	18	NNC	ENSG00000076003.5	novel	3753	17	NA	NA	0	6187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.910106674665	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGAAGGAGTTCTCTC	-135861754	True	NA	NA	False	AAAAAG	-3	NA	135876443	135833438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_135833465_135840442_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
WTC11_00053436	chr2	-	612	2	FSM	ENSG00000076003.5	ENST00000483902.1	577	2	-35	0	-35	0	multi-exon	FALSE	canonical	3	1012	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTGAATAAATCAATCAT	-135851906	False	NA	NA	False	NA	NA	NA	135851980	135848155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135848189_135851401
WTC11_00053440	chr2	-	344	1	FSM	ENSG00000230037.1	ENST00000392399.3	473	1	119	10	119	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTAATTCTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	136329794	136329450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136329400_136329800
WTC11_00053442	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	-138780114	True	NA	NA	False	AATAAA	-28	NA	138780390	138669156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_138671666_138780190
WTC11_00053443	chr2	-	10335	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	250	0	-250	multi-exon	FALSE	canonical	3	49	junction_4	23.9841545488159	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAGTATCTTAAATCC	-144330981	True	NA	NA	False	NA	NA	NA	144332512	143938317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
WTC11_00053445	chr2	-	2545	11	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	29.8033555157804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCATATTCATTTAC	-144331035	True	NA	-8	True	AATAAA	-29	NA	144332566	143946016	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
WTC11_00053446	chr2	-	2454	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	2	0	-2	multi-exon	FALSE	canonical	3	90	junction_1	15.4012986465428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCCCTGTCTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	144235737	144005752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
WTC11_00053452	chr2	-	6711	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	-1	0	0	multi-exon	FALSE	canonical	3	20	junction_14	153.876043407328	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-148011719	True	NA	0	True	TATAAA	-18	NA	148020747	147930395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
WTC11_00053453	chr2	-	1685	14	NIC	ENSG00000115947.14	novel	6547	14	NA	NA	6	1049	combination_of_known_junctions	FALSE	canonical	3	86	junction_13	105.331598118182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGACCATGTGCTTTTTT	-148011690	True	NA	-5	True	AATAAA	-18	NA	148020718	147935263	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
WTC11_00053458	chr2	-	2778	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	-1	0	1	multi-exon	FALSE	canonical	3	436	junction_1	53.2793346429927	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTTTTATTATC	-150478462	True	NA	-2	True	AATAAA	-26	NA	150487667	150468193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
WTC11_00053459	chr2	-	2747	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	-62	-1	0	1	multi-exon	FALSE	canonical	3	253	junction_5	105.300332383141	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTTTTATTATC	-150478524	True	NA	-2	True	AATAAA	-26	NA	150487729	150468193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
WTC11_00053464	chr2	-	426	4	FSM	ENSG00000183091.21	ENST00000483418.1	643	4	217	0	217	0	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGTCAAAAAAACCACAC	NA	False	NA	NA	False	NA	NA	NA	151519768	151516458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151516564_151518317_151518423_151518964_151519070_151519657
WTC11_00053465	chr2	-	8961	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	-3697	0	3697	multi-exon	FALSE	canonical	3	522	junction_5	24.204131878669	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACAGTAAATATAAGT	-151820117	True	NA	-34	True	AATAAA	-9	NA	151828421	151795099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
WTC11_00053466	chr2	-	1076	7	FSM	ENSG00000162980.17	ENST00000458140.6	1076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	274.333535844397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTAAGAGCTTT	-151820188	True	NA	NA	False	NA	NA	NA	151828492	151802981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828388
WTC11_00053467	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.0187436069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	-151820164	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
WTC11_00053468	chr2	-	2424	2	FSM	ENSG00000162980.17	ENST00000487723.1	696	2	-50	-1678	-23	1678	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTGTTGGATGCTCT	-151820211	True	NA	NA	False	NA	NA	NA	151828515	151825801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151827841_151828130
WTC11_00053474	chr2	-	8158	27	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	-254	-81	combination_of_known_junctions	TRUE	canonical	3	75	junction_26	236.814548069824	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCTCTATGCTGTGAG	-152718151	False	NA	NA	False	ACTAAA	-42	NA	152718251	152651673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229_152717626_152717830
WTC11_00053475	chr2	-	6608	26	NNC	ENSG00000196504.19	novel	8048	26	NA	NA	8	-920	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_9	172.283366579598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTCACAGTCATAATT	-152700863	True	NA	NA	False	AATAAA	-17	NA	152717449	152652512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663980_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355
WTC11_00053477	chr2	-	6581	25	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	6	-920	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	222.474807406492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTCACAGTCATAATT	-152700865	True	NA	NA	False	AATAAA	-17	NA	152717451	152652512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152693037_152693069_152694541_152694623_152715994_152716127_152717355
WTC11_00053482	chr2	-	772	3	FSM	ENSG00000196504.19	ENST00000489741.1	776	3	4	0	4	0	multi-exon	FALSE	canonical	3	45	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTTTCTATAACTACAAT	-152716026	False	NA	NA	False	NA	NA	NA	152716126	152694062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_152694623_152714549_152714630_152715994
WTC11_00053485	chr2	-	1434	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	-9	0	9	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGTGGTCATTCTGC	-153477708	True	NA	0	True	AATAAA	-28	NA	153478762	153477328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_153477300_153478800
WTC11_00053486	chr2	-	2397	4	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-1	-138173	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	2.44948974278318	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTATTTTCTTCTTTAT	-156254069	True	NA	NA	False	ATTAAA	-18	NA	156254951	156160953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_156163082_156205381_156205439_156227966_156228005_156254777
WTC11_00053487	chr2	-	901	5	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_4	27.4533695563951	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTACATATCTTTTGA	NA	False	NA	-9	True	AATAAA	-18	NA	156725525	156718791	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719043_156719246_156719341_156719556_156719669_156723247_156723446_156725279
WTC11_00053488	chr2	-	2751	4	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	28.1108915230774	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTACATATCTTTTGA	NA	False	NA	-9	True	AATAAA	-18	NA	156725523	156718791	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719061_156719246_156719341_156719556_156719669_156723247
WTC11_00053491	chr2	-	2936	11	FSM	ENSG00000115170.16	ENST00000684348.1	2921	11	0	-15	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-157875863	False	NA	-10	True	AATAAA	-17	NA	157875880	157736445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875741
WTC11_00053492	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.7919464042201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-157875401	True	NA	-10	True	AATAAA	-17	NA	157876330	157736445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
WTC11_00053494	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	11.3154761278525	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
WTC11_00053496	chr2	-	8145	37	FSM	ENSG00000123636.19	ENST00000392783.7	8145	37	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_27	10.567646583842	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTTTTCTTAATG	-159614723	True	NA	0	True	AATAAA	-18	NA	159616548	159318978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337566_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159430862_159431157_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159616241
WTC11_00053497	chr2	-	3405	8	FSM	ENSG00000123636.19	ENST00000472953.1	4206	8	324	477	324	-477	multi-exon	FALSE	canonical	2	14	junction_6	9.31752791949733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTATACATTGGAAG	NA	False	NA	-2	True	GATAAA	-17	NA	159435229	159404848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159430862_159431157_159432756
WTC11_00053500	chr2	-	459	2	FSM	ENSG00000123636.19	ENST00000552327.1	454	2	0	-5	0	5	multi-exon	FALSE	canonical	2	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAATGAATTATTAAGG	-159615407	False	NA	NA	False	AGTAAA	-10	NA	159615424	159555437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159555866_159615393
WTC11_00053501	chr2	-	530	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	1990	0	-1990	multi-exon	FALSE	canonical	3	6	junction_1	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTACAATCATTATTGT	-159712024	True	NA	NA	False	AATAAA	-25	NA	159712435	159695190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159695421_159710716_159710895_159712313
WTC11_00053502	chr2	-	3932	6	FSM	ENSG00000241399.7	ENST00000259053.6	3932	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.2614551505325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	-159797931	True	NA	2	True	AATAAA	-16	NA	159798208	159768627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159783358_159783470_159798131
WTC11_00053504	chr2	-	4241	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	85.8162488776372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160406412	True	NA	-4	True	AATAAA	-18	NA	160407889	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
WTC11_00053505	chr2	-	4226	14	NIC	ENSG00000153250.21	novel	4286	14	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	75.6178495568185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492513	False	1243	-4	True	AATAAA	-18	NA	160493756	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
WTC11_00053506	chr2	-	4268	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_14	90.1028040968895	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492507	False	NA	-4	True	AATAAA	-18	NA	160493750	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
WTC11_00053507	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_13	74.9998816567114	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492564	True	NA	-4	True	AATAAA	-18	NA	160493807	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
WTC11_00053508	chr2	-	4225	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	86.2534530512565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160406405	True	NA	-4	True	AATAAA	-18	NA	160407882	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
WTC11_00053517	chr2	-	3745	26	FSM	ENSG00000197635.11	ENST00000676810.1	3749	26	4	0	4	0	multi-exon	TRUE	canonical	2	3	junction_24	5.80289582880823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	-162074171	True	NA	-2	True	AATAAA	-22	NA	162074390	161992244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047499_162073398_162073487_162073975
WTC11_00053518	chr2	-	223	2	FSM	ENSG00000115267.9	ENST00000649426.1	791	2	568	0	568	0	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTTGACTATTCAGA	NA	False	NA	NA	False	AATACA	-30	NA	162267569	162267247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_162267380_162267478
WTC11_00053519	chr2	-	9537	3	FSM	ENSG00000182263.14	ENST00000333129.4	9537	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGATTTTTATCA	-163734304	True	NA	NA	False	AATAAA	-23	NA	163736008	163602610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_163611807_163734902_163735073_163735837
WTC11_00053520	chr2	-	10186	5	ISM	ENSG00000115290.10	ENST00000263915.8	2415	14	118009	-3065	-6421	3065	intron_retention	FALSE	canonical	3	189	junction_2	22.6329405955126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTGATTCTCACATT	NA	False	NA	NA	False	ATTAAA	-12	NA	164503473	164489351	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373
WTC11_00053521	chr2	-	2428	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	1	-14	1	14	multi-exon	FALSE	canonical	3	77	junction_9	61.5061453609293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTAGTGGCATGTTTTTC	-164620668	True	NA	NA	False	ATTAAA	-34	NA	164621481	164492402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
WTC11_00053522	chr2	-	1962	6	ISM	ENSG00000115290.10	ENST00000488342.5	1983	14	117919	0	-6421	0	3prime_fragment	FALSE	canonical	3	154	junction_5	33.1095152486411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTCTTGTGTGAT	NA	False	NA	0	True	ATTAAA	-19	NA	164503473	164492811	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254
WTC11_00053525	chr2	-	525	3	FSM	ENSG00000082438.18	ENST00000496396.1	944	3	186	233	-104	-233	multi-exon	FALSE	canonical	1	1	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCTGGAGTAAATGAAA	-164841674	False	NA	NA	False	NA	NA	NA	164841954	164743686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164743876_164841155_164841247_164841709
WTC11_00053526	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	19.9170780989582	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	-165791531	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
WTC11_00053527	chr2	-	603	3	FSM	ENSG00000115339.14	ENST00000463254.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGGAATAAGAATAT	-165762014	False	NA	NA	False	NA	NA	NA	165762025	165758617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165758865_165759335_165759571_165761904
WTC11_00053528	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_19	12.7201030030485	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	-165951277	True	NA	1	True	AATAAA	-17	NA	165953776	165873361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
WTC11_00053533	chr2	-	1097	2	FSM	ENSG00000169432.19	ENST00000645283.1	1097	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTGTTCATAAACTTT	NA	False	NA	NA	False	AATAAA	-30	NA	166278313	166276416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_166277340_166278139
WTC11_00053534	chr2	-	3185	17	NIC	ENSG00000198648.11	novel	3272	18	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	81	junction_5	36.257757790575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	-168246921	True	NA	-1	True	AATAAA	-18	NA	168247571	167954021	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
WTC11_00053535	chr2	-	3557	18	FSM	ENSG00000198648.11	ENST00000355999.5	3272	18	-285	0	-285	0	multi-exon	FALSE	canonical	3	133	junction_5	28.3774607182639	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	-168247776	True	NA	-1	True	AATAAA	-18	NA	168247880	167954021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168065318_168065382_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
WTC11_00053536	chr2	-	1347	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	-5	0	5	multi-exon	FALSE	canonical	3	522	junction_4	27.8607649252892	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATTTATAATCCCTTG	-168886874	True	NA	1	True	AATAAA	-28	NA	168890430	168870885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
WTC11_00053538	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	112.564176706228	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	-169569292	True	NA	-21	True	AATAAA	-16	NA	169573865	169528507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
WTC11_00053539	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	128.216255927334	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569259	True	NA	-27	True	AATAAA	-17	NA	169573832	169529754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
WTC11_00053546	chr2	-	2645	2	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	-5	-11517	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTAGTTTCAGGTATT	-169694215	True	NA	NA	False	AATAAA	-17	NA	169694410	169686453	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_169688949_169694260
WTC11_00053550	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_7	249.242198412283	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814861	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
WTC11_00053551	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	395.239064829562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814867	True	NA	-18	True	AATAAA	-17	NA	169824931	169811756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
WTC11_00053552	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_6	241.79496594337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	-169814810	True	NA	-75	True	TTTAAA	-6	NA	169824874	169811813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
WTC11_00053554	chr2	-	6363	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	-640	0	-633	0	multi-exon	TRUE	canonical	3	167	junction_18	22.7953394359461	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	NA	False	NA	-18	True	ATTAAA	-20	NA	171161533	170990822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
WTC11_00053556	chr2	-	9786	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	-16	0	16	multi-exon	FALSE	canonical	3	27	junction_9	32.8986472009765	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTATATATGGATATAAA	-171432258	True	NA	NA	False	ATTAAA	-36	NA	171433990	171315729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
WTC11_00053557	chr2	-	9573	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	30	188	8	-188	multi-exon	FALSE	canonical	3	18	junction_9	35.1297418924776	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTGTGACACCAGAGGA	-171433720	True	NA	NA	False	NA	NA	NA	171434772	171315933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
WTC11_00053559	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	50.2858495669176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	-171326547	True	NA	13	True	NA	NA	NA	171327065	171323900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
WTC11_00053565	chr2	-	5941	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	-2005	0	2005	multi-exon	FALSE	canonical	3	29	junction_11	11.9988465420265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTCTTGTAAATCTTTT	-171892782	True	NA	-1	True	AATAAA	-18	NA	171894244	171781399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
WTC11_00053566	chr2	-	950	4	FSM	ENSG00000225205.5	ENST00000442417.5	950	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.8263539599263	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATATACACCTACTA	-172555346	True	NA	NA	False	NA	NA	NA	172556529	172480839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_172481022_172495374_172495517_172512333_172512519_172556088
WTC11_00053567	chr2	-	1309	3	FSM	ENSG00000225205.5	ENST00000450443.1	1397	3	88	0	21	0	multi-exon	FALSE	canonical	3	76	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAAGTGCATCACTAC	-172555325	True	NA	-87	True	AATAAA	-20	NA	172556508	172503438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_172504143_172512333_172512519_172556088
WTC11_00053568	chr2	-	1263	1	FSM	ENSG00000237617.1	ENST00000422627.1	201	1	-815	-247	-815	247	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAACAACTTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	173706963	173705700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173705700_173707000
WTC11_00053569	chr2	-	11737	7	FSM	ENSG00000172845.18	ENST00000310015.12	11714	7	0	-23	0	23	multi-exon	FALSE	canonical	3	53	junction_6	117.149002935957	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCGTATGTAGTTTATG	-173963641	True	NA	20	True	AATAAA	-42	NA	173965373	173900751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964554_173965164
WTC11_00053570	chr2	-	3937	5	FSM	ENSG00000172845.18	ENST00000418194.7	3937	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	42.5580485924813	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTATTCCTATGCA	-173963940	False	1732	0	True	AATAAA	-23	NA	173964219	173908529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760
WTC11_00053574	chr2	-	4289	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	-67	29	0	-29	multi-exon	FALSE	canonical	3	648	junction_10	32.7145227689477	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTGATAAAATAAAAGAGC	-174238981	True	NA	-39	True	AATACA	-4	NA	174248599	174072475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
WTC11_00053575	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	203.367453117883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174238981	True	NA	-4	True	AATAAA	-16	NA	174248599	174075007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
WTC11_00053578	chr2	-	1912	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	66.8831669756401	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-174393471	True	NA	NA	False	AATAAA	-17	NA	174395706	174348021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
WTC11_00053579	chr2	-	2003	8	FSM	ENSG00000115935.18	ENST00000359761.7	2003	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	3.01695886884898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTCCCTGAGAGCT	-174682483	True	NA	-43	True	NA	NA	NA	174682883	174562203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
WTC11_00053580	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	3.49106001094224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	-174682471	True	NA	NA	False	ATTAAA	-20	NA	174682871	174571168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
WTC11_00053581	chr2	-	3044	13	FSM	ENSG00000128656.15	ENST00000409900.9	3156	13	0	112	0	-112	multi-exon	FALSE	canonical	3	89	junction_7	32.6890866940159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCAACAACCCTCCAGA	-175003792	True	NA	NA	False	NA	NA	NA	175005381	174798920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
WTC11_00053582	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_6	16.7969904711793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	-174847302	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
WTC11_00053585	chr2	-	2523	15	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	2	13	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	51.8238775634773	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTCTCATAAGAATAT	-175003778	True	NA	-25	True	AATAAA	-17	NA	175005367	174799381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174940815_174940895_174944887_174944944_174952163_174952203_175004893_175005081_175005205
WTC11_00053586	chr2	-	1736	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	-17	0	0	multi-exon	FALSE	canonical	3	10	junction_7	60.8661965096475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCTGTTAAATTAT	-174847343	True	NA	-12	True	AATAAA	-33	NA	174847596	174799494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
WTC11_00053587	chr2	-	2481	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	33.7219749960339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTAAATACTGAGTACT	-175003774	True	NA	16	True	NA	NA	NA	175005363	174799340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
WTC11_00053588	chr2	-	1761	13	FSM	ENSG00000128656.15	ENST00000409156.7	1761	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	48.7347554512064	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGTTGTTTTTGT	-175003780	True	NA	NA	False	ATTAAA	-7	NA	175005369	174799988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
WTC11_00053591	chr2	-	3149	10	NIC	ENSG00000128656.15	novel	1020	10	NA	NA	1	4841	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	45.2420104125893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCGTTGTTCATTTA	-175005329	False	NA	NA	False	AATAAA	-16	NA	175005344	174819649	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174821780_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
WTC11_00053597	chr2	-	4184	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	-20	0	11	multi-exon	FALSE	canonical	3	96	junction_9	30.8374244313972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACCTTTCCTTCATAAA	-175163982	True	NA	11	True	AATAAA	-37	NA	175168203	175072238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
WTC11_00053598	chr2	-	4098	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	-20	1	-20	-1	multi-exon	FALSE	canonical	3	86	junction_9	29.8369411226345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTCTCTTACCT	-175164005	True	NA	-1	True	AATAAA	-25	NA	175168226	175072250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
WTC11_00053603	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	1565.81081232696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-175152054	True	NA	65	True	NA	NA	NA	175181710	175178066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
WTC11_00053604	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_1	130.410463111243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	-175152007	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
WTC11_00053605	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2757	junction_3	450.582585844889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-175152054	True	NA	-54	True	NA	NA	NA	175181710	175178185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
WTC11_00053606	chr2	-	7564	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	-22	0	22	multi-exon	FALSE	canonical	3	45	junction_2	7.81158327954924	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTCATCCTAATT	-176000463	True	NA	-2	True	ATTAAA	-18	NA	176002267	175923859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
WTC11_00053609	chr2	-	520	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	-126	-49	-126	49	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACCATCATTAATATT	NA	False	NA	-1	True	AATAAA	-24	NA	176201378	176200858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176200900_176201400
WTC11_00053611	chr2	-	211	1	FSM	ENSG00000225808.1	ENST00000443295.1	316	1	-77	182	-77	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCTTGAACTAAAAAGGA	-177229573	False	NA	NA	False	NA	NA	NA	177229583	177229372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177229400_177229600
WTC11_00053612	chr2	-	2648	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	3	0	0	multi-exon	FALSE	canonical	3	22	junction_4	97.3049330712477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	-177263778	False	NA	-5	True	AATAAA	-21	NA	177263800	177230307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
WTC11_00053613	chr2	-	2449	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	-3	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2529409729571	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	-177261780	True	NA	-2	True	AATAAA	-24	NA	177264727	177230304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
WTC11_00053615	chr2	-	757	1	FSM	ENSG00000280374.1	ENST00000624891.1	757	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTAGCTATTTATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	177318471	177317714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177317700_177318500
WTC11_00053617	chr2	-	5952	1	FSM	ENSG00000197557.7	ENST00000355689.6	5744	1	-269	61	-269	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATTGGTAAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	177619011	177613059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177613100_177619000
WTC11_00053619	chr2	-	3596	4	FSM	ENSG00000180228.14	ENST00000677136.1	3596	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_2	83.1544747242544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178445762	False	NA	-22	True	AATAAA	-12	NA	178445772	178431434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266
WTC11_00053622	chr2	-	2020	8	FSM	ENSG00000180228.14	ENST00000677206.1	1999	8	0	-21	0	0	multi-exon	FALSE	canonical	3	25	junction_6	349.189440427574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-178450751	False	NA	-1	True	AATAAA	-33	NA	178450761	178431413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241
WTC11_00053623	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	312.000256410151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444645	True	NA	-22	True	AATAAA	-12	NA	178451133	178431434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
WTC11_00053624	chr2	-	1567	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	-21	0	0	multi-exon	TRUE	canonical	3	78	junction_6	267.134173528335	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-178444654	True	NA	-1	True	AATAAA	-33	NA	178451142	178431413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
WTC11_00053629	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	267.623326520614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
WTC11_00053634	chr2	-	3810	5	FSM	ENSG00000180228.14	ENST00000676586.1	3741	5	-30	-39	-30	18	multi-exon	FALSE	canonical	3	655	junction_2	85.8661749468322	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTTCTCTAAGCGTAT	-178446974	False	NA	17	True	AGTAAA	-32	NA	178446984	178431395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421
WTC11_00053635	chr2	-	3908	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	-18	0	18	multi-exon	FALSE	canonical	3	787	junction_4	30.6838719851325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAATCTTCAAAGAAGAG	-178451268	False	NA	NA	False	NA	NA	NA	178451278	178440120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
WTC11_00053640	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	-178477777	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178477061_178477214_178478278
WTC11_00053642	chr2	-	3675	13	FSM	ENSG00000163492.16	ENST00000343876.6	3795	13	0	120	0	-120	multi-exon	FALSE	canonical	1	3	junction_12	3.15788255358274	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTTGTTTTATTG	NA	False	NA	NA	False	TTTAAA	-33	NA	178884951	178835875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178837745_178845625_178845743_178850048_178850162_178853440_178853625_178855346_178855542_178856256_178856398_178865766_178865917_178868025_178868206_178869116_178869306_178871426_178871553_178872132_178872313_178877963_178878144_178884900
WTC11_00053643	chr2	-	10644	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	12	15	12	-15	multi-exon	FALSE	canonical	3	71	junction_11	10.0131401557427	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTCAATATCAACACTT	-179262847	True	NA	NA	False	AATAAA	-18	NA	179264820	179101692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
WTC11_00053644	chr2	-	619	6	FSM	ENSG00000187231.14	ENST00000440010.5	619	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	32.6765971300562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTCTCACCTATGATCA	-179262300	False	138	NA	False	NA	NA	NA	179264273	179151322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264117
WTC11_00053645	chr2	-	4010	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	-1618	0	873	multi-exon	TRUE	canonical	2	211	junction_15	28.2344753017985	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAAAAGCATTCATTCG	-180000468	True	NA	NA	False	AATAAA	-40	NA	180007113	179944002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
WTC11_00053647	chr2	-	421	1	FSM	ENSG00000213958.2	ENST00000397031.2	1267	1	601	245	601	-245	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCACCTGGAGTCAGAG	NA	False	NA	NA	False	NA	NA	NA	181961877	181961456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_181961500_181961900
WTC11_00053649	chr2	-	20332	31	FSM	ENSG00000061676.15	ENST00000361354.9	20332	31	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_29	88.3227918238297	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTGTTATGTGTCCT	-183030230	True	NA	-2	True	AATAAA	-19	NA	183038457	182909114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183037991
WTC11_00053650	chr2	-	1008	1	FSM	ENSG00000177855.8	ENST00000453625.1	678	1	-138	-192	-138	192	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCCTGCAAAAAAAAAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	183608257	183607249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_183607200_183608300
WTC11_00053651	chr2	-	594	1	FSM	ENSG00000225406.1	ENST00000414888.1	684	1	138	-48	138	48	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTGCAAGGGAAGT	NA	False	NA	NA	False	NA	NA	NA	185547680	185547086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_185547100_185547700
WTC11_00053652	chr2	-	3687	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	-59	21	-47	-21	multi-exon	FALSE	canonical	3	34	junction_7	8.27585620454871	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTATTCTGAATAATGAA	-187513663	False	NA	NA	False	AGTAAA	-3	NA	187513700	187464250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
WTC11_00053655	chr2	-	6838	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	-9	0	9	multi-exon	FALSE	canonical	1	25	junction_52	16.9107135305129	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATTTCTTGCCTATA	-189178366	True	NA	NA	False	AATAAA	-25	NA	189179761	189031888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
WTC11_00053656	chr2	-	721	8	FSM	ENSG00000204262.14	ENST00000470524.2	704	8	0	-17	0	17	multi-exon	FALSE	canonical	3	65	junction_5	6.24989795835067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTGCCTTAAGGGGATG	NA	False	NA	NA	False	AATAAA	-24	NA	189063038	189056748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009
WTC11_00053657	chr2	-	2055	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	81	junction_1	20.6212117733173	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762011	True	NA	-7	True	AATAAA	-18	NA	189762774	189746659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
WTC11_00053658	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	27.1658678307909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762029	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
WTC11_00053664	chr2	-	3951	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	275	1707	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	400.396912450633	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAGACATTTTTCCTAT	-189777041	False	NA	NA	False	ATTAAA	-7	NA	189784043	189768559	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
WTC11_00053665	chr2	-	3882	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	-25	-1707	0	1707	multi-exon	FALSE	canonical	3	161	junction_4	373.856590151892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAGACATTTTTCCTAT	-189777362	True	NA	NA	False	ATTAAA	-7	NA	189784364	189768559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
WTC11_00053666	chr2	-	2693	3	FSM	ENSG00000128699.14	ENST00000325795.7	2692	3	0	-1	0	0	multi-exon	FALSE	canonical	3	951	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189776380	False	NA	-15	True	AATAAA	-23	NA	189783382	189770322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421
WTC11_00053667	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	189.504617357995	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777362	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
WTC11_00053672	chr2	-	2441	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	22	0	-22	multi-exon	FALSE	canonical	3	47	junction_1	129.499758687034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATTTTTTGTAACT	-190315703	True	NA	NA	False	TATAAA	-2	NA	190319890	190203942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
WTC11_00053674	chr2	-	308	1	FSM	ENSG00000272979.1	ENST00000609166.1	430	1	-15	137	-15	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGACCACAAGGAGTTA	NA	False	NA	NA	False	GGGGCT	-37	NA	190454536	190454228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190454200_190454500
WTC11_00053675	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.55350140002175	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	-190534018	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
WTC11_00053678	chr2	-	4265	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	10	-159	0	159	multi-exon	FALSE	canonical	3	157	junction_21	17.4140249192681	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACGTTATGAATTGGTT	-191010861	True	NA	-3	True	TATAAA	-14	NA	191014161	190968989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
WTC11_00053679	chr2	-	4116	24	FSM	ENSG00000115415.20	ENST00000540176.6	4020	24	0	-96	0	94	multi-exon	FALSE	canonical	3	9	junction_23	40.5424466589821	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATTCTAAAATTCT	-191010931	False	NA	-68	True	NA	NA	NA	191014231	190969054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
WTC11_00053681	chr2	-	2760	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	-46	2	14	-1	multi-exon	FALSE	canonical	3	157	junction_19	16.9167260377034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGTGGGAAAGTAGTT	-191010914	True	NA	-5	True	AATAAA	-15	NA	191014214	190975538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
WTC11_00053684	chr2	-	1928	4	FSM	ENSG00000144339.12	ENST00000409056.3	3364	4	0	1436	0	-1436	multi-exon	FALSE	canonical	2	6	junction_3	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTAGTTTTATATGT	-192194511	False	NA	NA	False	NA	NA	NA	192194524	192178178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_192179695_192184353_192184484_192191879_192191990_192194352
WTC11_00053685	chr2	-	5278	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	-15	10	-15	-10	multi-exon	FALSE	canonical	3	8	junction_6	5.46976849116476	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAGGCATATAAATCTG	-196170218	True	NA	NA	False	AATAAA	-7	NA	196171593	196133592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
WTC11_00053686	chr2	-	2313	3	FSM	ENSG00000138411.13	ENST00000642318.1	3479	3	1166	0	1166	0	multi-exon	FALSE	canonical	2	4	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTATATATTTAATTTT	NA	False	NA	NA	False	AAGAAA	-45	NA	196217093	196199274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196201389_196215864_196215978_196217007
WTC11_00053687	chr2	-	419	4	FSM	ENSG00000138411.13	ENST00000462290.1	523	4	17	87	17	-87	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATACGTAACACTCACT	NA	False	NA	NA	False	NA	NA	NA	196278662	196257822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196257907_196271192_196271290_196274020_196274124_196278527
WTC11_00053688	chr2	-	566	4	FSM	ENSG00000138411.13	ENST00000644405.1	5181	4	71	4544	71	-4544	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACGAGGGAGATGCCT	NA	False	NA	NA	False	AATGAA	-20	NA	196308085	196292564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196292751_196306487_196306613_196307129_196307234_196307934
WTC11_00053689	chr2	-	4400	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	24	-163	0	163	multi-exon	FALSE	canonical	3	248	junction_8	26.4436464200034	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTACCTCCACCTCCCA	-196795903	True	NA	NA	False	NA	NA	NA	196799659	196762871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
WTC11_00053690	chr2	-	404	2	FSM	ENSG00000119041.11	ENST00000481098.1	547	2	143	0	143	0	multi-exon	FALSE	canonical	3	295	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGTTCTATATAAAGCA	-196766850	False	NA	NA	False	NA	NA	NA	196766861	196764578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196764686_196766564
WTC11_00053691	chr2	-	527	3	FSM	ENSG00000119041.11	ENST00000435252.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCAAGTGTAATAAACT	-196776578	False	22	NA	False	AATAAA	-21	NA	196776588	196774988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196775252_196776009_196776112_196776426
WTC11_00053692	chr2	-	1702	4	FSM	ENSG00000119041.11	ENST00000448087.5	1702	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	13.735598518691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAAATGTCACTGTGA	-196785472	False	NA	NA	False	TTTAAA	-17	NA	196785536	196777638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196779068_196780558_196780663_196784856_196784930_196785440
WTC11_00053694	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	17.0948639947792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	-196795903	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
WTC11_00053696	chr2	-	11403	27	FSM	ENSG00000197121.15	ENST00000354764.9	11090	27	-303	-10	-265	10	multi-exon	TRUE	canonical	3	41	junction_1	7.80683966545555	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCTTACCAATTGACA	-196926963	False	NA	-2	True	AATAAA	-27	NA	196927010	196832993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196841373_196842720_196842826_196843887_196844076_196844523_196844575_196845881_196846018_196847002_196847201_196847946_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
WTC11_00053699	chr2	-	6792	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	1	-330	0	330	multi-exon	FALSE	canonical	3	1392	junction_21	209.637170023724	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGAATCTTGAGCAGT	-197398978	True	NA	NA	False	NA	NA	NA	197435027	197389453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053700	chr2	-	9106	25	FSM	ENSG00000115524.17	ENST00000652026.1	9283	25	0	177	0	-177	multi-exon	FALSE	canonical	3	33	junction_21	411.929502379419	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTTTTTTATAGCCTG	-197398998	True	NA	NA	False	AAAAAG	-31	NA	197435047	197388691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197418895_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053701	chr2	-	8316	24	FSM	ENSG00000115524.17	ENST00000470268.2	8308	24	0	-8	0	0	multi-exon	FALSE	canonical	1	13	junction_2	418.772000804549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-197398995	True	NA	NA	False	AATAAA	-17	NA	197435044	197389783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393187_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053702	chr2	-	4237	2	FSM	ENSG00000115524.17	ENST00000479532.1	587	2	-87	-3563	-87	-177	multi-exon	FALSE	canonical	3	2263	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTTTTTTATAGCCTG	-197393403	False	NA	NA	False	AAAAAG	-31	NA	197393438	197388691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971
WTC11_00053703	chr2	-	723	5	FSM	ENSG00000115524.17	ENST00000424674.1	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	814.209240613247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCAGGCAGTTATGGGA	-197398917	False	NA	NA	False	NA	NA	NA	197399028	197393051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197398968
WTC11_00053706	chr2	-	600	7	FSM	ENSG00000115524.17	ENST00000409915.8	600	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	836.804387735469	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAAAAAGCTAAAGCTGG	-197398978	True	NA	NA	False	NA	NA	NA	197435027	197416890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197416912_197418508_197418589_197418895_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053707	chr2	-	2127	4	FSM	ENSG00000115524.17	ENST00000487698.5	2127	4	0	0	0	0	multi-exon	FALSE	canonical	3	1804	junction_2	42.5519290592879	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	-197399030	True	NA	NA	False	ATTAAA	-15	NA	197435079	197418795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053708	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	791.106938093707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	-197399030	True	NA	NA	False	ATTAAA	-15	NA	197435079	197418795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00053710	chr2	-	2295	14	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	55488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3842.21771974431	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGGAGGGGAAATCAGA	-197466382	True	NA	NA	False	AAAAAG	-9	NA	197499840	197431095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431125_197452059_197452081_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053713	chr2	-	2293	14	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	55488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3842.21771974431	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGGAGGGGAAATCAGA	-197466382	True	NA	NA	False	AAAAAG	-9	NA	197499840	197431095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431130_197452066_197452081_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053714	chr2	-	2315	13	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	34534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3258.18492735347	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTCAGGTGTATGGA	-197466421	True	NA	NA	False	AAAAAG	-17	NA	197499879	197452049	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197452081_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053715	chr2	-	4932	9	FSM	ENSG00000144381.18	ENST00000461097.2	4930	9	0	-2	0	0	multi-exon	FALSE	canonical	3	6895	junction_8	1290.01908900605	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197499788	False	NA	NA	False	AATAAA	-18	NA	197499817	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197497393_197498674_197498851_197499781
WTC11_00053716	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	3336	junction_7	2156.01373828402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466382	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053717	chr2	-	3774	10	FSM	ENSG00000144381.18	ENST00000678969.1	3772	10	0	-2	0	0	multi-exon	FALSE	canonical	1	3336	junction_6	2374.18112718709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466421	True	NA	NA	False	AATAAA	-18	NA	197499879	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197490297_197493323_197493493_197494156_197494251_197494656_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053718	chr2	-	3232	10	FSM	ENSG00000144381.18	ENST00000476746.6	3230	10	0	-2	0	0	multi-exon	FALSE	canonical	3	6895	junction_9	1232.70912131686	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466422	True	NA	NA	False	AATAAA	-18	NA	197499880	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053719	chr2	-	2202	11	FSM	ENSG00000144381.18	ENST00000676933.1	2200	11	0	-2	0	0	multi-exon	FALSE	canonical	2	1168	junction_7	2837.04170572094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466435	True	NA	NA	False	AATAAA	-18	NA	197499893	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00053720	chr2	-	2212	11	FSM	ENSG00000144381.18	ENST00000679291.1	2210	11	0	-2	0	0	multi-exon	FALSE	canonical	1	14	junction_4	4171.04514600358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197500095	False	NA	NA	False	AATAAA	-18	NA	197500124	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
WTC11_00053721	chr2	-	2409	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	-2	0	0	multi-exon	FALSE	canonical	1	318	junction_11	3299.24565633213	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197500192	False	161	NA	False	AATAAA	-18	NA	197500221	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
WTC11_00053722	chr2	-	2301	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	-2	0	0	multi-exon	FALSE	canonical	1	239	junction_11	3317.13581520699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197500245	False	NA	NA	False	AATAAA	-18	NA	197500274	197486583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
WTC11_00053725	chr2	-	5595	11	FSM	ENSG00000119042.17	ENST00000417098.6	5568	11	0	-27	0	22	multi-exon	FALSE	canonical	3	21	junction_7	5.33385414123783	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATTATCTGCTTTCCC	-199457924	False	388	7	True	AATAAA	-41	NA	199457939	199269477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199272673_199308759_199308958_199323802_199323959_199328697_199328911_199348700_199349174_199368604_199368708_199380363_199380488_199381693_199381821_199433337_199433515_199455868_199456097_199457338
WTC11_00053726	chr2	-	5061	12	FSM	ENSG00000119042.17	ENST00000260926.9	5318	12	265	-8	265	0	multi-exon	FALSE	canonical	1	3	junction_11	11.1473971316141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGTCAGTTATTTT	-199464828	True	NA	-15	True	AATAAA	-19	NA	199464843	199269499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199272673_199308759_199308958_199323802_199323959_199328697_199328911_199348700_199349174_199368604_199368708_199380363_199380488_199381693_199381821_199433337_199433515_199455868_199456097_199460451_199460533_199464835
WTC11_00053727	chr2	-	592	3	FSM	ENSG00000119042.17	ENST00000473517.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGCATGAGAGGGATG	NA	False	NA	NA	False	NA	NA	NA	199329035	199308859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199308958_199323802_199323959_199328697
WTC11_00053730	chr2	-	5112	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	234	-1059	0	-3	multi-exon	TRUE	canonical	3	72	junction_6	27.9985422361047	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATGCTGGGACTTTGTA	-199954076	True	NA	-4	True	ATTAAA	-12	NA	199955502	199928915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
WTC11_00053731	chr2	-	2386	9	NNC	ENSG00000162971.11	novel	4287	8	NA	NA	23	-12	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	60.9855259467359	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCATCGAAGACAGTGA	-199955699	False	NA	-23	True	AATAAA	-16	NA	199955713	199931910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199939900_199939959_199940088_199940134_199943764_199943835_199948336_199948473_199955392
WTC11_00053732	chr2	-	2977	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	-34	-4	-34	4	multi-exon	FALSE	canonical	3	29	junction_3	2.21735578260835	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTGTGTCTGTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	200510102	200488953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
WTC11_00053733	chr2	-	1700	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	-18	0	13	multi-exon	FALSE	canonical	3	52	junction_11	23.2514106921183	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTTCTAAGTACCATT	-200863150	True	NA	3	True	AATAAA	-36	NA	200864656	200853062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
WTC11_00053734	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_9	32.4665426075659	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-200863152	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
WTC11_00053735	chr2	-	3286	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	-6	-72	-6	0	multi-exon	FALSE	canonical	3	52	junction_10	22.277567192133	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-200863191	True	NA	57	True	ATTAAA	-14	NA	200864697	200853008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
WTC11_00053736	chr2	-	1192	8	FSM	ENSG00000013441.17	ENST00000409769.6	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	16.534441481406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGCTTATGAAGTT	-200856660	False	NA	-32	True	AATAAA	-1	NA	200858166	200853097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972
WTC11_00053737	chr2	-	1088	8	NNC	ENSG00000240344.9	novel	1166	7	NA	NA	0	1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.680769141314	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGATGTGGTAGCCCCAG	-200889052	False	NA	NA	False	ACTAAA	-31	NA	200889077	200868936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_200868963_200871010_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
WTC11_00053738	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	49.6635905087643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889052	False	NA	55	True	AATGAA	-18	NA	200889077	200870906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
WTC11_00053739	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	159.45288401977	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889244	False	NA	55	True	AATGAA	-18	NA	200889269	200870906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
WTC11_00053740	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	141.903629270008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	-200889251	False	NA	6	True	ATTAAA	-28	NA	200889276	200870955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
WTC11_00053742	chr2	-	725	6	FSM	ENSG00000240344.9	ENST00000409264.6	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	148.145064041972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAATGATTATCCAA	-200888990	False	NA	-71	True	NA	NA	NA	200889015	200871212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200888955
WTC11_00053743	chr2	-	914	7	FSM	ENSG00000240344.9	ENST00000409361.5	897	7	0	-17	0	0	multi-exon	FALSE	canonical	3	7	junction_6	196.220680753981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAATGATTATCCAA	-200889111	False	NA	-71	True	NA	NA	NA	200889136	200871212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885344_200885697_200885773_200887612_200887686_200888948
WTC11_00053745	chr2	-	589	3	FSM	ENSG00000240344.9	ENST00000463866.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGACAAATTGCTGGAA	-200881717	False	NA	NA	False	NA	NA	NA	200881742	200871373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420
WTC11_00053749	chr2	-	4293	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	-5	0	5	multi-exon	FALSE	canonical	3	199	junction_2	22.2791351176767	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAGTGCTGGTTTTTTAC	-200954813	True	NA	NA	False	AATAAA	-36	NA	200963660	200908971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
WTC11_00053753	chr2	-	9484	13	FSM	ENSG00000155744.10	ENST00000681958.1	9503	13	12	7	-6	-7	multi-exon	FALSE	canonical	1	3	junction_1	11.2654215288298	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATTTCCCTGAGTTG	-201070551	True	NA	-6	True	TATAAA	-23	NA	201071659	200973724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200981872_200987364_200987533_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
WTC11_00053758	chr2	-	1817	13	NNC	ENSG00000155755.20	novel	5399	13	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	148.956439381899	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	-201643243	True	NA	33	True	AATATA	-5	NA	201643482	201623755	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640260_201640275_201640892_201640925_201643358
WTC11_00053763	chr2	-	6676	34	FSM	ENSG00000003393.16	ENST00000681768.1	6704	34	43	-15	43	9	multi-exon	TRUE	canonical	2	5	junction_23	24.4835358183984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTTTTATGATTGTAG	-201781081	False	NA	2	True	AATAAA	-18	NA	201781115	201700550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741570_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
WTC11_00053764	chr2	-	6716	35	FSM	ENSG00000003393.16	ENST00000679916.1	6744	35	43	-15	43	9	multi-exon	FALSE	canonical	1	2	junction_12	32.9728314291743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTTTTATGATTGTAG	-201781081	False	NA	2	True	AATAAA	-18	NA	201781115	201700550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201719985_201720129_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
WTC11_00053766	chr2	-	7561	33	FSM	ENSG00000003393.16	ENST00000680000.1	7604	33	43	0	43	0	multi-exon	FALSE	canonical	1	37	junction_22	20.1523251992791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTTCCTGTAGTGGCA	-201781081	False	NA	NA	False	NA	NA	NA	201781115	201701794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
WTC11_00053769	chr2	-	3139	13	FSM	ENSG00000003393.16	ENST00000482789.6	3148	13	9	0	9	0	multi-exon	FALSE	canonical	1	37	junction_2	25.1462389500564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCATTTTATGAAACT	-201781084	True	NA	-23	True	AATAAA	-2	NA	201781149	201733049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
WTC11_00053770	chr2	-	3475	10	FSM	ENSG00000003393.16	ENST00000679939.1	3692	10	217	0	198	0	multi-exon	FALSE	canonical	3	94	junction_4	14.5661539023235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTCAGAAATGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	201768945	201740609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865
WTC11_00053775	chr2	-	2828	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	-159	8	43	-8	multi-exon	FALSE	canonical	3	112	junction_3	10.6249183003395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAATTAAATGTGTGT	-201781081	False	NA	NA	False	ATTAAA	-8	NA	201781115	201759464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
WTC11_00053777	chr2	-	1526	5	FSM	ENSG00000116030.17	ENST00000392246.7	1523	5	0	-3	0	3	multi-exon	FALSE	canonical	3	4171	junction_4	619.153605739319	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGATTTTTATTGATA	-202201200	True	NA	-9	True	AATAAA	-19	NA	202238597	202206178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
WTC11_00053783	chr2	-	704	1	FSM	ENSG00000226261.1	ENST00000405197.2	704	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGCTGAGTAAGTGG	NA	False	NA	NA	False	NA	NA	NA	202336727	202336023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202336000_202336700
WTC11_00053784	chr2	-	673	1	FSM	ENSG00000273456.1	ENST00000607928.1	673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCTGTTATACTAAAC	-202375589	False	NA	1	True	AATAAA	-18	NA	202375604	202374931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202374900_202375600
WTC11_00053786	chr2	-	722	4	FSM	ENSG00000163596.17	ENST00000425178.5	879	4	116	41	116	-41	multi-exon	FALSE	canonical	3	10	junction_3	0.471404520791032	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAATTAAGATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	202829118	202819645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847
WTC11_00053793	chr2	-	206	2	FSM	ENSG00000256458.1	ENST00000469747.2	427	2	221	0	221	0	multi-exon	FALSE	canonical	3	25	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGCCAAGGAAACCCAGGA	NA	False	NA	NA	False	NA	NA	NA	203329005	203328458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203328482_203328822
WTC11_00053798	chr2	-	1345	4	ISM	ENSG00000138400.13	ENST00000449792.5	1757	11	49	16242	9	2152	5prime_fragment	FALSE	canonical	3	10	junction_3	4.18993502999218	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	-206764908	True	NA	NA	False	AATAAA	-24	NA	206765277	206754466	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206765249
WTC11_00053799	chr2	-	562	4	FSM	ENSG00000138400.13	ENST00000471988.1	722	4	9	151	2	-151	multi-exon	FALSE	canonical	3	9	junction_3	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTATACACATATACA	-206764923	True	NA	NA	False	NA	NA	NA	206765292	206756769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206757041_206757236_206757372_206760900_206761014_206765249
WTC11_00053802	chr2	-	613	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-206812195	True	NA	2	True	AATAAA	-22	NA	206812278	206806875	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206812028
WTC11_00053803	chr2	-	762	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	21.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-206812187	True	NA	0	True	AATAAA	-20	NA	206812270	206806877	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206810036_206810196_206812028
WTC11_00053805	chr2	-	729	3	FSM	ENSG00000118263.15	ENST00000426163.5	750	3	21	0	21	0	multi-exon	FALSE	canonical	1	5	junction_2	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCCAGCTCTTCTCTAG	-207165881	False	NA	NA	False	NA	NA	NA	207166165	207124168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207124405_207165466_207165707_207165912
WTC11_00053808	chr2	-	869	4	FSM	ENSG00000144401.14	ENST00000425132.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	269.747206761359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGATTAGAGAAAGCTG	-207618726	True	NA	NA	False	GATAAA	-22	NA	207625379	207581694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625264
WTC11_00053809	chr2	-	1611	2	FSM	ENSG00000144401.14	ENST00000477919.1	1611	2	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTCTGTGATATACC	-207612982	False	NA	-5	True	AATAAA	-17	NA	207613026	207609113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207609766_207612067
WTC11_00053810	chr2	-	4806	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	-1	0	0	multi-exon	FALSE	canonical	3	139	junction_3	247.242121546201	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTCTGTGATATACC	-207625201	False	NA	-5	True	AATAAA	-17	NA	207625249	207609113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
WTC11_00053813	chr2	-	1123	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	-20	0	0	multi-exon	FALSE	canonical	3	487	junction_3	84.0991478355558	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTAAATGAGTAAGCTT	-207618725	True	NA	-11	True	AATAAA	-39	NA	207625378	207612722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
WTC11_00053816	chr2	-	3446	1	ISM	ENSG00000163251.4	ENST00000295417.4	7039	2	3863	0	3863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTAGAAGTCTTTTT	-207766030	False	NA	-26	True	AATAAA	-3	NA	207766043	207762597	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_207762600_207766000
WTC11_00053818	chr2	-	9774	8	FSM	ENSG00000178385.15	ENST00000427836.8	9774	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1.29362644830535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTTTCTCATAACAAC	-208024927	True	NA	-18	True	AATAAA	-15	NA	208025527	207821287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207828497_207861104_207861263_207908513_207908578_207930925_207931120_207946366_207946513_207976650_207977587_208001029_208001958_208025388
WTC11_00053820	chr2	-	656	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-35	0	-35	0	multi-exon	TRUE	canonical	3	27	junction_2	12	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208112236	True	NA	-6	True	AATAAA	-24	NA	208112687	208108157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208108497_208112265_208112509_208112613
WTC11_00053821	chr2	-	716	3	Fusion	ENSG00000118231.5_ENSG00000229150.2	novel	621	3	NA	NA	-74	0	multi-exon	FALSE	canonical	3	29	junction_2	11	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208124564	False	NA	-6	True	AATAAA	-24	NA	208124598	208108157	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_208108497_208112265_208112509_208124464
WTC11_00053822	chr2	-	845	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	-200	-3	-200	3	multi-exon	FALSE	canonical	3	36	junction_2	22.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGTGTCTTTCTTT	NA	False	NA	0	True	AATAAA	-27	NA	208124724	208121603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208121946_208124111_208124355_208124464
WTC11_00053824	chr2	-	2320	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	-2	0	2	multi-exon	FALSE	canonical	3	4389	junction_1	459.440239131634	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCGTTTCTGTTTATT	-208197551	True	NA	-4	True	ATTAAA	-21	NA	208255071	208236226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
WTC11_00053825	chr2	-	2277	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	21	0	21	0	multi-exon	FALSE	canonical	3	56	junction_9	1617.52815534486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	-208254418	False	NA	-9	True	ATTAAA	-16	NA	208254437	208236231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
WTC11_00053826	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	1620.24339735321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	-208254303	False	NA	-5	True	ATTAAA	-23	NA	208254322	208236264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
WTC11_00053828	chr2	-	942	4	FSM	ENSG00000138413.14	ENST00000415282.5	942	4	0	0	0	0	multi-exon	FALSE	canonical	3	5428	junction_3	100.433504812333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTGACGGAACCCAAAAG	-208254320	False	NA	NA	False	NA	NA	NA	208254339	208245366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208245425_208248368_208248661_208251429_208251568_208253885
WTC11_00053829	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_3	346.95276655796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	-208197541	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
WTC11_00053834	chr2	-	2570	8	FSM	ENSG00000144445.17	ENST00000452086.5	2334	8	-82	-154	0	154	multi-exon	FALSE	canonical	2	15	junction_7	7.39553091745416	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCATTTCTGTATGGT	-210170859	True	NA	NA	False	AATAAA	-20	NA	210171409	210040168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210040528_210043938_210044105_210075551_210075757_210098085_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210171148
WTC11_00053835	chr2	-	4596	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	-4	0	2	multi-exon	FALSE	canonical	3	198	junction_9	39.7690865737897	1933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTGCTTTTTGTTTGC	-210471825	True	NA	-3	True	AATAAA	-22	NA	210476759	210431246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
WTC11_00053836	chr2	-	4783	9	FSM	ENSG00000115365.12	ENST00000443314.5	4781	9	0	-2	0	2	multi-exon	FALSE	canonical	3	265	junction_1	25.0786263579168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTGCTTTTTGTTTGC	-210471805	True	NA	-3	True	AATAAA	-22	NA	210476739	210431246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315
WTC11_00053837	chr2	-	4502	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	5	-3237	5	-1	multi-exon	FALSE	canonical	3	33	junction_9	87.1020403440629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCATGTGCTTTTTGTT	-210471836	True	NA	-6	True	AATAAA	-19	NA	210476770	210431249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
WTC11_00053838	chr2	-	4586	10	NIC	ENSG00000115365.12	novel	4503	10	NA	NA	70	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	86.4972703487097	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCATGTGCTTTTTGTT	-210477203	True	NA	-6	True	AATAAA	-19	NA	210477582	210431249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210477449
WTC11_00053840	chr2	-	740	6	FSM	ENSG00000115365.12	ENST00000448951.5	808	6	68	0	68	0	multi-exon	FALSE	canonical	3	35	junction_5	102.796108875774	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTCACGGCAAAGTCT	-210477205	True	NA	NA	False	NA	NA	NA	210477584	210440698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210477449
WTC11_00053841	chr2	-	6515	7	NIC	ENSG00000138376.11	novel	3814	10	NA	NA	-18181	942	intron_retention	FALSE	canonical	1	2	junction_1	64.0644207029143	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTAAATGTTTGAGCT	NA	False	NA	-7	True	AATAAA	-20	NA	214770659	214724703	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_214729009_214730234_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231
WTC11_00053842	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	22.0320221495894	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	-214805375	True	NA	-9	True	AATAAA	-18	NA	214809683	214725645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
WTC11_00053847	chr2	-	8753	47	FSM	ENSG00000115414.21	ENST00000323926.10	8708	47	1	-46	0	32	multi-exon	TRUE	canonical	3	230	junction_34	56.1428437433631	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATGATAACCCCCAT	-215433136	True	NA	NA	False	NA	NA	NA	215436067	215360407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
WTC11_00053850	chr2	-	8542	45	FSM	ENSG00000115414.21	ENST00000359671.5	8524	45	0	-18	0	0	multi-exon	FALSE	canonical	1	2	junction_21	72.5514173614618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	-215433137	True	NA	NA	False	AATAAA	-34	NA	215436068	215360439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
WTC11_00053852	chr2	-	7762	45	FSM	ENSG00000115414.21	ENST00000432072.6	7759	45	0	-3	0	0	multi-exon	FALSE	canonical	3	10	junction_13	81.8968908026458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCATCTATTTGA	-215433136	True	NA	-6	True	AATAAA	-18	NA	215436067	215360861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
WTC11_00053853	chr2	-	7850	44	FSM	ENSG00000115414.21	ENST00000356005.8	7846	44	0	-4	0	0	multi-exon	FALSE	canonical	1	2	junction_20	84.6100142770025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCATCTATTTGA	-215433137	True	NA	-6	True	AATAAA	-18	NA	215436068	215360861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
WTC11_00053857	chr2	-	3720	21	FSM	ENSG00000115414.21	ENST00000456923.5	3720	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	91.1523312921836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAACAAGCATGATCTTG	-215393137	False	NA	NA	False	NA	NA	NA	215393147	215361146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930
WTC11_00053861	chr2	-	2388	13	FSM	ENSG00000115414.21	ENST00000426059.1	2388	13	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_7	14.497844667398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATTTTGGTTTTGGTTT	-215433142	True	NA	NA	False	ATTAAA	-17	NA	215436073	215414660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
WTC11_00053864	chr2	-	1473	2	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	123	junction_1	0	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTAAGATTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	215929146	215922302	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_215922547_215927917
WTC11_00053867	chr2	-	1889	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	-26	4	-26	-4	multi-exon	FALSE	canonical	0	0	junction_5	33.5772031507773	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGGCAGTGCCTG	-216080302	True	NA	-5	True	TATAAA	-33	NA	216081835	216038391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
WTC11_00053868	chr2	-	313	2	FSM	ENSG00000232485.4	ENST00000686779.1	409	2	84	12	0	-12	multi-exon	FALSE	canonical	3	12	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATACCTGGGCTGAGGTG	-216498582	True	NA	NA	False	ATTAAA	-8	NA	216498686	216497600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216497834_216498606
WTC11_00053870	chr2	-	1760	11	FSM	ENSG00000127837.10	ENST00000248450.9	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	31.4046174948844	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218257651	True	NA	-7	True	AATAAA	-15	NA	218270137	218264128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
WTC11_00053871	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_10	323.174890732557	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218257692	True	NA	-7	True	AATAAA	-15	NA	218270178	218264128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
WTC11_00053872	chr2	-	1153	3	FSM	ENSG00000127837.10	ENST00000494720.5	1134	3	0	-19	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	60.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218265900	False	NA	-40	True	NA	NA	NA	218265921	218264161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370
WTC11_00053873	chr2	-	1835	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	-74	0	-74	0	multi-exon	FALSE	canonical	3	1131	junction_1	31.7668979044089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218269804	False	NA	-40	True	NA	NA	NA	218269814	218264161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
WTC11_00053874	chr2	-	1854	10	FSM	ENSG00000127837.10	ENST00000489767.5	1833	10	0	-21	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	33.0469176388979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218257630	True	NA	-40	True	NA	NA	NA	218270116	218264161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
WTC11_00053879	chr2	-	2431	12	FSM	ENSG00000135926.15	ENST00000396809.6	2422	12	0	-9	0	5	multi-exon	FALSE	canonical	2	13	junction_11	35.0539136118085	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTCCAGGAGTATGTG	-218284375	False	NA	2	True	AATAAA	-27	NA	218285934	218274191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218285762
WTC11_00053880	chr2	-	2368	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	-71	-5	12	5	multi-exon	FALSE	canonical	0	0	junction_11	38.4787158081963	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTCCAGGAGTATGTG	-218291015	True	NA	2	True	AATAAA	-27	NA	218292574	218274191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
WTC11_00053886	chr2	-	1826	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-15	2109	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	18.8470156788814	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCATGTATATGTTCA	-218565356	True	NA	NA	False	TATAAA	-18	NA	218568306	218526161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
WTC11_00053888	chr2	-	5909	10	FSM	ENSG00000115568.16	ENST00000449707.5	5909	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	14.9220195237329	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTTACTACATTATAGAT	-218658589	True	NA	3	True	TATAAA	-17	NA	218659524	218637915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218656149_218656464_218658700_218658877_218658979_218659036_218659368
WTC11_00053892	chr2	-	1471	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	6	0	6	0	multi-exon	FALSE	canonical	3	231	junction_3	16.0208197875972	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-218669185	True	NA	-35	True	AATAAA	-15	NA	218671996	218663891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
WTC11_00053893	chr2	-	999	2	FSM	ENSG00000163481.8	ENST00000474339.1	532	2	-110	-357	-110	82	multi-exon	FALSE	canonical	3	267	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCCCCAACTTTGCTC	-218662200	False	NA	47	True	NA	NA	NA	218665011	218663809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218664536_218664738
WTC11_00053895	chr2	-	8041	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	-20	-1	-20	1	multi-exon	FALSE	canonical	3	135	junction_5	9.31095470674304	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTATTTTCATTTGTC	-219158935	True	NA	-7	True	ATTAAA	-19	NA	219160835	219069355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
WTC11_00053896	chr2	-	753	6	FSM	ENSG00000187736.13	ENST00000426304.5	753	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	59.9546495277889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATATTTCTAAAATAGTG	-219155721	False	NA	NA	False	NA	NA	NA	219157621	219076302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219076456_219077245_219077365_219078073_219078207_219146679_219146739_219147656_219147796_219157471
WTC11_00053901	chr2	-	962	4	FSM	ENSG00000115657.14	ENST00000485773.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	39.3389826451518	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-219209659	False	NA	-8	True	AATAAA	-14	NA	219211108	219209771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210824_219210933
WTC11_00053902	chr2	-	2983	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	-3	0	3	multi-exon	TRUE	canonical	3	141	junction_12	32.189638697975	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCACTGTGGCTTTGTGG	-219217509	True	NA	-5	True	AATAAA	-17	NA	219218958	219209768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
WTC11_00053908	chr2	-	3949	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	-150	0	150	multi-exon	FALSE	canonical	3	76	junction_14	75.6443410079737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCTGTGTCCTGCC	-219229611	False	NA	NA	False	NA	NA	NA	219229717	219219229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
WTC11_00053909	chr2	-	4027	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	-2	0	0	multi-exon	FALSE	canonical	3	70	junction_15	75.9961987353461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219229262	False	NA	-3	True	AATAAA	-18	NA	219229368	219219379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
WTC11_00053929	chr2	-	2544	15	FSM	ENSG00000123992.20	ENST00000520694.6	2408	15	-136	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	176.106878494456	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGCAC	-219381495	True	NA	NA	False	AATACA	-7	NA	219387932	219373526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
WTC11_00053940	chr2	-	2581	4	FSM	ENSG00000123989.15	ENST00000688634.1	2871	4	320	-30	-178	6	multi-exon	FALSE	canonical	3	26	junction_2	324.330421364112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGGTTTTGAAAAGG	-219542967	False	NA	-4	True	AATAAA	-22	NA	219543275	219538947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219540643_219540945_219541126_219541534_219542190_219543224
WTC11_00053942	chr2	-	1079	2	FSM	ENSG00000123989.15	ENST00000373891.3	1044	2	-35	0	22	0	multi-exon	FALSE	canonical	3	716	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTATCTTCCTTTGTG	-219543265	False	3541	-10	True	AGTAAA	-18	NA	219543573	219541459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219542190_219543224
WTC11_00053943	chr2	-	669	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	-6	-1	-6	0	multi-exon	FALSE	canonical	3	122	junction_1	11.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-219551045	True	NA	-4	True	AATAAA	-15	NA	219552395	219550727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219550843_219551528_219551799_219552111
WTC11_00053944	chr2	-	697	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	-3	0	2	multi-exon	FALSE	canonical	3	15	junction_1	53.8227543785051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCCTCTCTGAGTGAT	-219552650	False	NA	-2	True	AATAAA	-17	NA	219552714	219550725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
WTC11_00053946	chr2	-	671	3	ISM	ENSG00000124006.15	ENST00000489804.5	694	4	341	1	16	-1	3prime_fragment	FALSE	canonical	3	15	junction_1	65	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCTTGCCTCTCTGAG	-219551023	True	NA	-6	True	AATAAA	-13	NA	219552373	219550729	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219550869_219551528_219551799_219552111
WTC11_00053948	chr2	-	1571	5	FSM	ENSG00000124006.15	ENST00000456147.1	1571	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	26.089988501339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTTGCCATGGGCAT	-219559419	False	NA	-1	True	TATAAA	-16	NA	219559431	219555762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219556293_219556453_219556724_219557822_219558111_219558183_219558460_219559224
WTC11_00053950	chr2	-	3894	9	FSM	ENSG00000124006.15	ENST00000373873.8	3297	9	-576	-21	-6	21	multi-exon	FALSE	canonical	3	446	junction_8	60.4297112354511	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGAGGGCCAAGGGCAG	NA	False	NA	4	True	AATAAA	-38	NA	219571865	219561700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
WTC11_00053955	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	82.6509745480959	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-222647495	True	NA	1	True	AATAAA	-19	NA	222656092	222566898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
WTC11_00053956	chr2	-	3985	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	1	0	-1	multi-exon	FALSE	canonical	3	26	junction_2	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTGTTTTCATGAA	-223836441	True	NA	1	True	AATAAA	-26	NA	223837582	223755326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
WTC11_00053957	chr2	-	4610	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	-3	0	3	multi-exon	FALSE	canonical	3	387	junction_3	54.965052758943	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCCTAATATCACTTT	-223937785	True	NA	-12	True	AATAAA	-21	NA	223945335	223875344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
WTC11_00053960	chr2	-	719	6	FSM	ENSG00000085449.15	ENST00000429915.1	719	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	207.344737092601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTCCTCGGACGGCGGA	-223937807	True	NA	NA	False	NA	NA	NA	223945357	223894289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223917942_223918011_223945147
WTC11_00053962	chr2	-	2215	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	11	0	-11	multi-exon	FALSE	canonical	3	238	junction_3	40.2235938225316	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTCAAAGCTCGGAGA	-224034465	True	NA	49	True	AATAAA	-23	NA	224039286	223975055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
WTC11_00053963	chr2	-	2412	9	FSM	ENSG00000135919.14	ENST00000258405.9	2229	9	-194	11	-162	-11	multi-exon	FALSE	canonical	3	27	junction_3	104.048591412859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTCAAAGCTCGGAGA	-224039467	False	NA	49	True	AATAAA	-23	NA	224039480	223975055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223975905_223977543_223977628_223980310_223980401_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
WTC11_00053965	chr2	-	473	2	FSM	ENSG00000135919.14	ENST00000489065.1	563	2	0	90	0	-1	multi-exon	FALSE	canonical	3	293	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGTGCACAATTGCTC	-224034469	True	NA	NA	False	NA	NA	NA	224039290	224001641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224001923_224039098
WTC11_00053966	chr2	-	2585	2	FSM	ENSG00000124019.10	ENST00000409685.4	2582	2	0	-3	0	3	multi-exon	FALSE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATAAGACATTGTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	224402107	224378694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224380209_224401036
WTC11_00053972	chr2	-	9839	2	FSM	ENSG00000169047.6	ENST00000305123.6	9771	2	-101	33	-101	-33	multi-exon	FALSE	canonical	3	51	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCCAATTAAATTTTG	-226799908	False	NA	-40	True	NA	NA	NA	226799921	226731344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_226736251_226794988
WTC11_00053974	chr2	-	5145	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	18	50	0	-50	multi-exon	FALSE	canonical	3	8	junction_5	3.65513337649941	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACCAACAATCAAAC	-227717743	True	NA	NA	False	NA	NA	NA	227718010	227683812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
WTC11_00053975	chr2	-	2593	7	FSM	ENSG00000135917.16	ENST00000431622.6	2593	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.41396046829795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAGGTTCAAGACCA	-227717734	True	NA	NA	False	NA	NA	NA	227718001	227686551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227700912_227701109_227702168_227702321_227717942
WTC11_00053976	chr2	-	2631	3	FSM	ENSG00000153823.19	ENST00000392055.8	2557	3	-76	2	-76	-1	multi-exon	FALSE	canonical	2	9	junction_2	1.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTGTCTGTCCTTTT	-229271352	False	NA	-1	True	AATAAA	-35	NA	229271363	229023974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229026109_229155817_229155965_229271013
WTC11_00053978	chr2	-	9989	42	NNC	ENSG00000153827.14	novel	10100	42	NA	NA	0	56657	intron_retention	TRUE	non_canonical	0	0	junction_1	85.0118723555947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGCCGTGGTGGCACA	-229915582	True	NA	NA	False	AATACA	-27	NA	229921999	229707179	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_229707207_229763838_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229879981_229880129_229921879
WTC11_00053980	chr2	-	10102	42	FSM	ENSG00000153827.14	ENST00000675903.1	10100	42	0	-2	0	2	multi-exon	FALSE	canonical	3	84	junction_39	81.6572616970736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAGTTTTATTAAATTA	-229915592	True	NA	-5	True	AATAAA	-16	NA	229922009	229763834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229860405_229860532_229879981_229880129_229921879
WTC11_00053992	chr2	-	1304	2	FSM	ENSG00000135899.19	ENST00000489597.1	416	2	2	-890	2	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCATGTCCATGTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	230178255	230176475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_230177681_230178156
WTC11_00053998	chr2	-	2626	15	NNC	ENSG00000115053.17	novel	2720	15	NA	NA	0	2517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1350.51523803446	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAGGCAGTGACCTA	-231464363	False	NA	NA	False	AAAAAG	-1	NA	231464379	231451013	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_231451040_231454749_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
WTC11_00053999	chr2	-	3924	14	FSM	ENSG00000115053.17	ENST00000322723.9	3924	14	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_8	536.017673911562	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCGTGTTGTGGATTAG	-231330855	True	NA	NA	False	ATTAAA	-22	NA	231464484	231453530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
WTC11_00054002	chr2	-	3389	12	FSM	ENSG00000115053.17	ENST00000676798.1	3389	12	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_6	524.040484840691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTGTTACTTCCTAAAG	-231330889	True	NA	-20	True	ATTAAA	-17	NA	231464518	231454750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455625_231456009_231456137_231456630_231456765_231457000_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
WTC11_00054005	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_13	1375.09158382463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231330865	True	NA	-29	True	AAGAAA	-16	NA	231464494	231454807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
WTC11_00054006	chr2	-	4237	11	FSM	ENSG00000115053.17	ENST00000678729.1	4237	11	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_5	578.932258558806	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	-231464535	False	NA	68	True	NA	NA	NA	231464551	231454878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
WTC11_00054008	chr2	-	4129	9	FSM	ENSG00000115053.17	ENST00000677786.1	4129	9	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_3	305.445064618828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTAGGGCGAGGAGGCT	-231464535	False	NA	NA	False	NA	NA	NA	231464551	231455275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231456137_231456630_231457801_231458265_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
WTC11_00054012	chr2	-	1148	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	-8	0	8	multi-exon	FALSE	canonical	3	254	junction_4	11.9660979437743	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTATCTCTCCTTTT	-231777760	True	NA	3	True	ATTAAA	-40	NA	231781282	231732424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
WTC11_00054013	chr2	-	2341	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	-21	-1324	-12	1324	multi-exon	FALSE	canonical	3	13	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTTCAAGACCAACCT	-231777781	True	NA	NA	False	NA	NA	NA	231781303	231777398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231779501_231781064
WTC11_00054018	chr2	-	2883	19	NNC	ENSG00000171551.12	novel	2871	18	NA	NA	0	11174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.1552542570016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTCTGGGATGCAAG	-232487252	True	NA	NA	False	NA	NA	NA	232487821	232468652	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_232468678_232479826_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
WTC11_00054020	chr2	-	2965	17	FSM	ENSG00000171551.12	ENST00000482346.1	2965	17	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_16	14.1508336768545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487252	True	NA	-2	True	AATAAA	-14	NA	232487821	232479826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485268_232485867_232486755_232487718
WTC11_00054021	chr2	-	2871	18	FSM	ENSG00000171551.12	ENST00000304546.6	2871	18	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_15	16.1855589442904	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487265	True	NA	-2	True	AATAAA	-14	NA	232487834	232479826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
WTC11_00054039	chr2	-	3758	1	FSM	ENSG00000279809.1	ENST00000623215.1	1864	1	-1061	-833	-1061	833	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCTATTTCTTTTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	233868420	233864662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233864700_233868400
WTC11_00054040	chr2	-	2009	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	23	0	23	0	multi-exon	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868421	233865436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233867351_233868326
WTC11_00054042	chr2	-	2149	2	FSM	ENSG00000168505.7	ENST00000306318.5	2140	2	0	-9	0	9	multi-exon	FALSE	canonical	3	53	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATAAGTGTGTCCAGAAT	-236167711	True	NA	-3	True	AATAAA	-37	NA	236168386	236165226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_236166438_236167448
WTC11_00054043	chr2	-	1232	4	FSM	ENSG00000163359.17	ENST00000684508.1	1341	4	0	109	0	-109	multi-exon	FALSE	canonical	3	11	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGCCCTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	237342096	237336134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237336533_237339014_237339118_237340451_237341151_237342064
WTC11_00054045	chr2	-	3216	3	FSM	ENSG00000124839.13	ENST00000477149.5	3211	3	0	-5	0	1	multi-exon	FALSE	canonical	3	639	junction_2	89.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGAAGTTTTTGAGGA	-237579528	False	NA	-2	True	ATTAAA	-19	NA	237579570	237574320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237575129_237575386_237575481_237577256
WTC11_00054047	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	293.147062069535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	-237585921	True	NA	-36	True	NA	NA	NA	237590715	237574354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
WTC11_00054052	chr2	-	553	3	FSM	ENSG00000124839.13	ENST00000416106.1	587	3	0	34	0	-34	multi-exon	FALSE	canonical	0	0	junction_1	429.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGAGTAACTGTATGG	-237585937	True	NA	NA	False	AAAAAG	-17	NA	237590731	237585436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237585565_237585997_237586158_237590466
WTC11_00054053	chr2	-	765	3	FSM	ENSG00000132323.9	ENST00000465131.5	750	3	-14	-1	-14	1	multi-exon	FALSE	canonical	3	174	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAGTTATTATACTG	NA	False	NA	-2	True	AATAAA	-23	NA	238173940	238170400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238170677_238170942_238171025_238173533
WTC11_00054058	chr2	-	1544	12	NIC	ENSG00000132323.9	novel	1455	12	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	45.7363988724318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238200068	True	NA	-3	True	AATAAA	-22	NA	238203761	238170401	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194781_238194871_238203498
WTC11_00054061	chr2	-	1603	3	FSM	ENSG00000144485.11	ENST00000409160.7	1600	3	0	-3	0	0	multi-exon	FALSE	canonical	3	408	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGAGTGATGTGTC	-238238126	True	NA	-3	True	AATAAA	-27	NA	238240038	238238266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238239569_238239660_238239748_238239824
WTC11_00054063	chr2	-	1733	2	FSM	ENSG00000144485.11	ENST00000450098.1	530	2	-257	-946	-217	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATTGTTGAGTGATGT	-238240241	False	NA	-6	True	AATAAA	-24	NA	238240258	238238269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238239569_238239824
WTC11_00054070	chr2	-	8461	27	FSM	ENSG00000068024.18	ENST00000543185.6	8461	27	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_26	12.5013608726666	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCCCGTGC	-239398642	True	NA	0	True	AATAAA	-23	NA	239401020	239048167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
WTC11_00054071	chr2	-	676	8	FSM	ENSG00000068024.18	ENST00000487617.5	819	8	0	143	0	-143	multi-exon	FALSE	canonical	3	52	junction_2	6.34388666033558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTTTCCTCTGTGCAC	-239108040	False	NA	NA	False	NA	NA	NA	239108053	239081060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049
WTC11_00054073	chr2	-	2938	11	FSM	ENSG00000130414.13	ENST00000676929.1	2931	11	14	-21	11	21	multi-exon	FALSE	canonical	1	1	junction_1	285.739321760237	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTAAAAAGCTGTTT	-240015176	True	NA	33	True	ATTAAA	-13	NA	240025375	239957336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239959038_239961022_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
WTC11_00054074	chr2	-	4849	10	FSM	ENSG00000130414.13	ENST00000678455.1	4849	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	295.267654263587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTGGTGATTATATTA	-240015139	True	NA	-1	True	AATAAA	-18	NA	240025338	239957370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025229
WTC11_00054075	chr2	-	4858	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	-3	0	2	multi-exon	FALSE	canonical	3	830	junction_5	80.7961923072989	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGTGATTATATTAAA	-240015143	True	NA	1	True	AATAAA	-20	NA	240025342	239957368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
WTC11_00054076	chr2	-	4787	10	FSM	ENSG00000130414.13	ENST00000678914.1	4798	10	14	-3	11	0	multi-exon	FALSE	canonical	2	4	junction_5	300.280157252367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTGGTGATTATATTA	-240015176	True	NA	-1	True	AATAAA	-18	NA	240025375	239957370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014840_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
WTC11_00054078	chr2	-	7881	9	FSM	ENSG00000130414.13	ENST00000485344.6	4509	9	0	-3372	0	2	multi-exon	FALSE	canonical	3	839	junction_2	79.0014833721494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGTGATTATATTAAA	-240015124	True	NA	1	True	AATAAA	-20	NA	240025323	239957368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
WTC11_00054083	chr2	-	4949	8	FSM	ENSG00000130414.13	ENST00000679332.1	4959	8	10	0	-1	0	multi-exon	FALSE	canonical	3	839	junction_1	82.5088739816166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTGGCATTTTCTTTT	-240015188	True	NA	NA	False	NA	NA	NA	240025387	239989251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
WTC11_00054088	chr2	-	769	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	-129	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	954	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240122613	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240131089_240133932_240134006_240135870
WTC11_00054103	chr2	-	585	3	FSM	ENSG00000122085.17	ENST00000480298.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	27	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCCTGCCCCACTTTT	-241100421	True	NA	NA	False	NA	NA	NA	241102311	241088904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241089366_241089979_241090045_241102252
WTC11_00054105	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	5.90668171555645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	-241100397	True	NA	-19	True	AATAAA	-16	NA	241102287	241095570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
WTC11_00054106	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	39	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	-241100409	True	NA	NA	False	NA	NA	NA	241102299	241095868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241096439_241097242_241097428_241102252
WTC11_00054113	chr2	-	5161	14	FSM	ENSG00000115687.14	ENST00000403638.7	5161	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_13	34.7780792008329	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACCTGTGATTATTGCT	-241145777	True	NA	NA	False	ATTAAA	-20	NA	241149463	241113306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
WTC11_00054118	chr2	-	6425	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	-96	-7	-42	7	multi-exon	FALSE	canonical	3	538	junction_27	209.416322570907	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGACTCATTTTGTCA	-241315732	False	NA	-24	True	AATAAA	-21	NA	241315768	241227283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
WTC11_00054119	chr2	-	6938	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	-528	-1921	0	0	multi-exon	FALSE	canonical	3	389	junction_27	228.763779783896	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-241315784	False	NA	-31	True	AATAAA	-14	NA	241315820	241227290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
WTC11_00054139	chr2	-	4511	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	4	0	-4	multi-exon	FALSE	canonical	3	493	junction_11	142.268631948029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCATCCACAAACCCAT	-241496953	True	NA	NA	False	AATAAA	-16	NA	241508584	241492673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
WTC11_00054140	chr2	-	2404	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	55	0	-16	0	multi-exon	FALSE	canonical	3	121	junction_10	253.244960463185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-241508556	False	NA	-1	True	AATAAA	-40	NA	241508640	241494706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
WTC11_00054141	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	282.324299343857	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
WTC11_00054142	chr2	-	2253	11	FSM	ENSG00000115694.15	ENST00000401869.5	2251	11	0	-2	0	0	multi-exon	FALSE	canonical	3	823	junction_4	72.0308267341143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-241508278	False	NA	-4	True	AATAAA	-18	NA	241508362	241495016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005
WTC11_00054143	chr2	-	2162	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	48	0	-16	0	multi-exon	FALSE	canonical	3	89	junction_11	250.340528411381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-241508556	False	NA	-4	True	AATAAA	-18	NA	241508640	241495016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
WTC11_00054144	chr2	-	821	2	FSM	ENSG00000115694.15	ENST00000494699.1	797	2	0	-24	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241496432	False	NA	-9	True	AATAAA	-13	NA	241496538	241495021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397
WTC11_00054145	chr2	-	1904	11	FSM	ENSG00000115694.15	ENST00000405883.7	1904	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	302.842351727759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241496925	True	NA	-9	True	AATAAA	-13	NA	241508556	241495021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241508005_241508136_241508442
WTC11_00054162	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	202.644238753536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241616863	True	NA	-2	True	AATAAA	-38	NA	241617501	241584404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
WTC11_00054163	chr2	-	841	5	FSM	ENSG00000176946.13	ENST00000402545.5	833	5	14	-22	14	0	multi-exon	FALSE	canonical	3	11	junction_1	234.826930951286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241616838	True	NA	-2	True	AATAAA	-38	NA	241617476	241584404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241584726_241601814_241602000_241602969_241603080_241606313_241606474_241617411
WTC11_00054165	chr2	-	1063	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	-12	0	12	multi-exon	FALSE	canonical	3	704	junction_3	203.794473673846	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCACTTTTCTTAGACT	-241674825	True	NA	3	True	AGTAAA	-27	NA	241686815	241675734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
WTC11_00054166	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	386.09411633262	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-9	True	AGTAAA	-15	NA	241686944	241675746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
WTC11_00054168	chr2	-	283	3	FSM	ENSG00000188389.11	ENST00000343705.3	366	3	83	0	83	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGACCCCGGAGCCCC	-241852785	False	NA	NA	False	NA	NA	NA	241852803	241851232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241851298_241851948_241851984_241852620
WTC11_00054170	chr2	-	288	1	FSM	ENSG00000261186.2	ENST00000567549.2	1107	1	804	15	804	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAAACCAAAAAGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	242087653	242087365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_242087400_242087700
WTC11_00054171	chr2	+	253	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAACTAAATTATCTGC	NA	False	NA	NA	False	NA	NA	NA	12629018	12629271	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12629000_12629300
WTC11_00054172	chr2	+	423	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACATATATGCCCAGATG	NA	False	NA	NA	False	NA	NA	NA	12631422	12631845	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12631400_12631800
WTC11_00054173	chr2	+	303	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATGTTTTTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	15862267	15862570	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_15862300_15862600
WTC11_00054174	chr2	+	362	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAAAACAGGTATAA	NA	False	NA	NA	False	ACTAAA	-12	NA	16792307	16792669	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_16792300_16792700
WTC11_00054175	chr2	+	278	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGCGAGGTTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	16795268	16795546	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_16795300_16795500
WTC11_00054176	chr2	+	268	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTCAGATAAAAAATAATT	NA	False	NA	NA	False	AAAACA	-40	NA	26962226	26962494	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_26962200_26962500
WTC11_00054177	chr2	+	1640	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-1	NA	27065615	27067255	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_27065600_27067300
WTC11_00054178	chr2	+	2430	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTGTCTCCTTTTA	28950838	False	NA	NA	False	AATAAA	-27	NA	28950852	28953282	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_28950900_28953300
WTC11_00054179	chr2	+	235	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGGGGGGAGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	32916351	32916586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_32916400_32916600
WTC11_00054180	chr2	+	542	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCTTTTGTCAAACAA	NA	False	NA	NA	False	NA	NA	NA	38559488	38560030	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_38559500_38560000
WTC11_00054181	chr2	+	426	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAACAGCTTAAAAAGGA	NA	False	NA	NA	False	GATAAA	-41	NA	38583187	38583613	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_38583200_38583600
WTC11_00054182	chr2	+	569	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGCAGTAAAAGTCAAAC	NA	False	NA	NA	False	AATACA	-30	NA	42426047	42426616	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_42426000_42426600
WTC11_00054183	chr2	+	1050	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42433402	42434452	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_42433400_42434500
WTC11_00054185	chr2	+	6147	1	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAACCTTATTTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	53662508	53668655	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_53662500_53668700
WTC11_00054187	chr2	+	1021	1	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	AGTAAA	-41	NA	58218151	58219172	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_58218200_58219200
WTC11_00054189	chr2	+	405	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACCACAAAAGAAGTGT	66248810	False	NA	NA	False	NA	NA	NA	66248821	66249226	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66248800_66249200
WTC11_00054190	chr2	+	3651	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTCTTCACGTGCAA	69909605	False	NA	NA	False	NA	NA	NA	69909615	69913266	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_69909600_69913300
WTC11_00054191	chr2	+	480	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70068462	70068942	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_70068500_70068900
WTC11_00054192	chr2	+	769	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAATCACAAATACCATT	NA	False	NA	NA	False	NA	NA	NA	70073391	70074160	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_70073400_70074200
WTC11_00054193	chr2	+	3885	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTCAGGATAGCACA	NA	False	NA	NA	False	AATAAA	-4	NA	73744271	73748156	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_73744300_73748200
WTC11_00054195	chr2	+	221	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGACTTATTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	77966250	77966471	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_77966200_77966500
WTC11_00054196	chr2	+	258	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTGCATAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	80161960	80162218	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_80162000_80162200
WTC11_00054197	chr2	+	218	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGACATTAGTTGTTTGC	NA	False	NA	NA	False	AATAAA	-10	NA	87198055	87198273	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_87198100_87198300
WTC11_00054198	chr2	+	325	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATCATCTATTATT	NA	False	NA	NA	False	NA	NA	NA	94894534	94894859	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_94894500_94894900
WTC11_00054201	chr2	+	237	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGATACCGCCCGCCTT	NA	False	NA	NA	False	NA	NA	NA	111108371	111108608	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_111108400_111108600
WTC11_00054202	chr2	+	1900	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCACACACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	130125451	130127351	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_130125500_130127400
WTC11_00054204	chr2	+	523	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAGACAAGGCCAAGCT	NA	False	NA	NA	False	NA	NA	NA	131310640	131311163	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_131310600_131311200
WTC11_00054206	chr2	+	333	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGCAGGGCATGGCAGC	NA	False	NA	NA	False	ACTAAA	-31	NA	135342702	135343035	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_135342700_135343000
WTC11_00054207	chr2	+	1828	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTAAGATTCATCCT	148647634	False	NA	NA	False	NA	NA	NA	148647648	148649476	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_148647600_148649500
WTC11_00054210	chr2	+	280	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATAGGCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	163786182	163786462	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_163786200_163786500
WTC11_00054211	chr2	+	283	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAAGAAGGGGATGGGC	NA	False	NA	NA	False	NA	NA	NA	165713377	165713660	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_165713400_165713700
WTC11_00054213	chr2	+	297	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAGGACT	NA	False	NA	NA	False	NA	NA	NA	174282212	174282509	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_174282200_174282500
WTC11_00054214	chr2	+	294	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACGAATAAGCCTTT	174396322	False	NA	NA	False	NA	NA	NA	174396514	174396808	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_174396500_174396800
WTC11_00054215	chr2	+	5184	1	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTATTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	187659690	187664874	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187659700_187664900
WTC11_00054216	chr2	+	1277	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	187788978	187790255	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187789000_187790300
WTC11_00054217	chr2	+	3605	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTTTCAGAAACAGATT	NA	False	NA	NA	False	NA	NA	NA	190195050	190198655	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_190195000_190198700
WTC11_00054218	chr2	+	306	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAAGGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	196979554	196979860	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_196979600_196979900
WTC11_00054220	chr2	+	362	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	935	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCACTCCTTTTAATTA	199181710	False	NA	NA	False	NA	NA	NA	199181721	199182083	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_199181700_199182100
WTC11_00054221	chr2	+	289	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTCTACTCCTCCTC	199250761	False	NA	NA	False	NA	NA	NA	199250772	199251061	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_199250800_199251100
WTC11_00054222	chr2	+	309	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTAAAATGGGGAAATTAT	NA	False	NA	NA	False	NA	NA	NA	203964240	203964549	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_203964200_203964500
WTC11_00054227	chr2	+	318	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	966	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTAAGGTGTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	214840390	214840708	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_214840400_214840700
WTC11_00054228	chr2	+	1674	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTGGGAGCAGCAGATCA	NA	False	NA	NA	False	NA	NA	NA	218771665	218773339	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_218771700_218773300
WTC11_00054230	chr2	+	2407	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCTAGAACTTTCAC	NA	False	NA	NA	False	TATAAA	-18	NA	232213662	232216069	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_232213700_232216100
WTC11_00054234	chr2	+	1006	3	NNC	ENSG00000223751.2	novel	2012	2	NA	NA	17	5338	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCTACTCAGAGTG	740802	False	NA	NA	False	ATTAAA	-19	NA	740901	754761	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_741131_749733_749857_754107
WTC11_00054239	chr2	+	562	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	-5	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	4509.54013422901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	3398622	True	NA	-38	True	NA	NA	NA	3575315	3580878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
WTC11_00054241	chr2	+	987	5	FSM	ENSG00000171863.15	ENST00000407445.8	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	11262	junction_2	659.058988255224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGACTCTTTCTGTGGT	3398651	True	NA	NA	False	NA	NA	NA	3575344	3580475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109
WTC11_00054242	chr2	+	1557	6	FSM	ENSG00000118004.18	ENST00000403096.7	1557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.46969384566991	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	3605683	False	NA	5	True	AATAAA	-20	NA	3605700	3644446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3606244_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
WTC11_00054243	chr2	+	638	2	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	69	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACGGCCATTTCGCTC	5001110	True	NA	NA	False	NA	NA	NA	5001123	5006667	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5001365_5006270
WTC11_00054244	chr2	+	4458	2	FSM	ENSG00000229727.7	ENST00000658275.1	4633	2	175	0	175	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAGAATAAAAAGAAAACAA	NA	False	NA	NA	False	AAGAAA	-41	NA	7430179	7450223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_7430294_7445879
WTC11_00054245	chr2	+	1060	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGGTTTTTTAAAAATA	7875491	False	NA	-26	True	NA	NA	NA	7875978	7892304	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876007_7891272
WTC11_00054247	chr2	+	1300	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	33	junction_1	205	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGTTTTTTAAAAATAA	7871505	True	NA	-25	True	NA	NA	NA	7876645	7892305	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876785_7883431_7883560_7891272
WTC11_00054248	chr2	+	1881	12	FSM	ENSG00000134317.18	ENST00000405379.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.63207451716048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTACCCTCTCACTCT	9960936	False	NA	NA	False	NA	NA	NA	9961164	10001205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9961437_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
WTC11_00054249	chr2	+	1825	6	NIC	ENSG00000115756.13	novel	1749	5	NA	NA	97	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	46.3784432683979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	10301744	False	NA	13	True	AATAAA	-1	NA	10303000	10427604	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_10303178_10396834_10396921_10408561_10408735_10419733_10420136_10422982_10423089_10426723
WTC11_00054250	chr2	+	1440	6	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	503	8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	17.0880074906351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTCCAAGGGTTGTTA	11480526	True	NA	12	True	AATAAA	-25	NA	11482843	11581273	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11578296_11578432_11580703
WTC11_00054251	chr2	+	1082	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	3	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	11681186	True	NA	4	True	CATAAA	-16	NA	11681436	11683323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11681493_11682297
WTC11_00054252	chr2	+	4070	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-134	0	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_2	139.474684082811	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12716760	False	NA	77	True	AATAAA	-22	NA	12716775	12742734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_12717011_12717251_12718129_12718321_12718578_12723259_12723553_12740325
WTC11_00054254	chr2	+	3734	4	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_1	204.033221695771	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711129	True	NA	77	True	AATAAA	-22	NA	12716909	12742734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_12717686_12718321_12718578_12723259_12723553_12740325
WTC11_00054256	chr2	+	2686	5	NNC	ENSG00000163032.12	novel	2428	4	NA	NA	0	54	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_1	330.981117286168	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGTGGTCCTGAAACA	17539933	False	NA	NA	False	AAGAAA	-27	NA	17539966	17657072	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_17540183_17540707_17540919_17592069_17592237_17649409_17649626_17655196
WTC11_00054257	chr2	+	959	1	FSM	ENSG00000178295.15	ENST00000614478.1	1864	1	90	815	90	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTAACAAGTAACCTACT	17753961	False	NA	NA	False	NA	NA	NA	17753984	17754943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17754000_17754900
WTC11_00054259	chr2	+	5332	14	FSM	ENSG00000119771.15	ENST00000486442.6	5325	14	-7	0	-7	0	multi-exon	TRUE	canonical	0	0	junction_1	10.1100453882008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAGCCAACGTAATCT	23384646	True	NA	5	True	AATAAA	-19	NA	23385171	23708606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23385781_23475559_23475668_23562151_23562482_23639138_23639281_23642337_23642851_23684398_23684538_23691673_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332_23696514_23703185_23703380_23703718_23703864_23706480
WTC11_00054260	chr2	+	1237	10	NIC	ENSG00000219626.9	novel	1369	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	4.08248290463863	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTGTCCATCTCTGTA	24123205	True	NA	3	True	AATAAA	-19	NA	24123468	24169637	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24123534_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24167626_24167684_24169355
WTC11_00054261	chr2	+	1388	11	FSM	ENSG00000219626.9	ENST00000615575.5	1369	11	-24	5	-24	-4	multi-exon	FALSE	canonical	2	8	junction_1	5.86174035590114	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTAAGTGTCCATCTC	24123181	True	NA	-1	True	AATAAA	-15	NA	24123444	24169633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24167626_24167684_24169355
WTC11_00054262	chr2	+	5935	4	ISM	ENSG00000157833.13	ENST00000401533.7	4164	6	4	9	4	-9	intron_retention	FALSE	canonical	3	125	junction_3	22.8619042659763	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGCATTCTGGGTGCC	26171889	True	NA	33	True	AATAAA	-24	NA	26173091	26189654	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_26173333_26176343_26176485_26182966_26183098_26184232
WTC11_00054264	chr2	+	3756	7	NIC	ENSG00000157833.13	novel	4164	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	47.5385808230185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCAGCTGCTTT	26171894	True	NA	42	True	AATAAA	-33	NA	26173096	26189663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_26173333_26176343_26176485_26182966_26183098_26184232_26185277_26186188_26186359_26187230_26187316_26187714
WTC11_00054265	chr2	+	632	3	NNC	ENSG00000157833.13	novel	4164	6	NA	NA	20	-10440	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	73.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTAATGGACTACCTT	26171905	True	NA	14	True	ATTAAA	-20	NA	26173107	26177018	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_26173333_26176343_26176485_26176752
WTC11_00054267	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.8836987003854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	26762851	True	NA	16	True	AAAAAG	-18	NA	26764324	26781147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
WTC11_00054268	chr2	+	704	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	-15	0	-15	0	multi-exon	FALSE	canonical	2	8	junction_1	242.508118420807	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	26780993	True	NA	-88	True	NA	NA	NA	26786011	26794076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
WTC11_00054269	chr2	+	2986	17	NNC	ENSG00000119777.20	novel	2978	17	NA	NA	5	-1	intron_retention	FALSE	canonical	1	73	junction_10	70.6306137149466	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTCTTGTCTGCATCC	27026970	True	NA	17	True	AATAAA	-19	NA	27032958	27041692	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038242_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
WTC11_00054271	chr2	+	3257	16	FSM	ENSG00000084693.16	ENST00000487078.5	3261	16	0	4	0	0	multi-exon	FALSE	canonical	2	21	junction_13	131.288994207435	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	27045544	True	NA	8	True	AATAAA	-16	NA	27051645	27070618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069047_27069095_27069572_27069707_27070091
WTC11_00054273	chr2	+	6900	43	FSM	ENSG00000084774.14	ENST00000403525.5	6900	43	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_12	111.009481015287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGAGTGTAGTAGAACA	27206882	True	NA	30	True	AATAAA	-19	NA	27217407	27243785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27217634_27217876_27218017_27221217_27221348_27222193_27222337_27222518_27222661_27222865_27223038_27223562_27223749_27223916_27224030_27224344_27224491_27224744_27224877_27225009_27225244_27225704_27225927_27226524_27226650_27226831_27226963_27231467_27231581_27231979_27232225_27232447_27232695_27233041_27233141_27233311_27233537_27233625_27233809_27234007_27234227_27234517_27234686_27235244_27235428_27235535_27235641_27236283_27236524_27236748_27236831_27237378_27237546_27237717_27237883_27238055_27238188_27238430_27238633_27239041_27239233_27239330_27239472_27239696_27239799_27240264_27240362_27240910_27240956_27241057_27241228_27241321_27241397_27241910_27242124_27242301_27242428_27242619_27242776_27242871_27242974_27243197_27243293_27243415
WTC11_00054275	chr2	+	2011	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	16	0	-12	multi-exon	FALSE	canonical	0	0	junction_3	8.93322277432968	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTCACGCAGACAGTGC	27282450	False	NA	-3	True	ATTAAA	-2	NA	27282461	27307423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
WTC11_00054278	chr2	+	2136	17	NIC	ENSG00000115216.14	novel	2176	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	311.856712890712	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	27410616	True	NA	25	True	AATAAA	-16	NA	27428630	27442255	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00054279	chr2	+	2119	17	NIC	ENSG00000115216.14	novel	2176	18	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	391.409152933347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCGTCGTGTGTTCGC	27410627	True	NA	24	True	AATAAA	-15	NA	27428641	27442254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00054280	chr2	+	1054	5	NIC	ENSG00000157992.12	novel	942	6	NA	NA	6	-2	intron_retention	FALSE	canonical	3	164	junction_4	159.212122654024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTGATTATGAT	27438715	True	NA	13	True	AATAAA	-13	NA	27442403	27444289	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
WTC11_00054281	chr2	+	938	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	66	6	1	0	3prime_fragment	FALSE	canonical	3	227	junction_5	119.415241908225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438758	True	NA	15	True	AATAAA	-15	NA	27442446	27444291	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
WTC11_00054282	chr2	+	579	3	FSM	ENSG00000084734.9	ENST00000478147.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGCTTTTCTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	27507340	27508211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27507778_27507976_27508075_27508167
WTC11_00054283	chr2	+	3321	13	NIC	ENSG00000243943.10	novel	3417	14	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	57.2601276825526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	27578550	True	NA	13	True	AATAAA	-14	NA	27583066	27623094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27583143_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
WTC11_00054286	chr2	+	4036	5	NNC	ENSG00000213639.10	novel	4771	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	220.703845684664	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	28732765	True	NA	11	True	ATTAAA	-11	NA	28751813	28802930	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_28751872_28752037_28752174_28781804_28781843_28783906_28783979_28799198
WTC11_00054288	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	78.1636459970718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
WTC11_00054291	chr2	+	5071	7	FSM	ENSG00000172954.14	ENST00000309052.8	5060	7	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.2345473904076	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444780	True	NA	13	True	AATAAA	-21	NA	30447245	30644225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30447405_30459551_30459723_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
WTC11_00054292	chr2	+	1045	1	FSM	ENSG00000271228.1	ENST00000605811.1	308	1	-743	6	-743	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGTTAGCAGATAAT	32012307	False	NA	NA	False	AATAAA	-19	NA	32012317	32013362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32012300_32013400
WTC11_00054294	chr2	+	4597	11	NIC	ENSG00000152683.14	novel	5089	14	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	32.3179516677651	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTCTCTGGTTTTAAA	32163261	True	NA	20	True	ATTAAA	-28	NA	32165876	32224094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32165904_32171286_32171374_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
WTC11_00054295	chr2	+	1711	1	FSM	ENSG00000276334.1	ENST00000610331.1	1621	1	102	-192	102	192	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTAAATTAGGGAAGTA	32522018	False	NA	NA	False	CATAAA	-16	NA	32522028	32523739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32522000_32523700
WTC11_00054296	chr2	+	4096	18	FSM	ENSG00000115760.15	ENST00000471232.5	4226	18	130	0	130	0	multi-exon	FALSE	canonical	1	1	junction_9	43.5377575465243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTATGTCTTGTTTCT	32524877	False	NA	2	True	AATAAA	-15	NA	32524887	32618876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32590805_32590979_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
WTC11_00054297	chr2	+	3078	1	FSM	ENSG00000276517.1	ENST00000617415.1	3004	1	-77	3	-77	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGGCTGTTGAATTTT	32526404	False	NA	NA	False	AATAAA	-19	NA	32526426	32529504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32526400_32529500
WTC11_00054300	chr2	+	6176	33	NIC	ENSG00000049323.16	novel	6502	34	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	30.8650667219431	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTGAGAGTAATTGT	32946568	False	NA	6	True	AATAAA	-22	NA	32946964	33399363	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
WTC11_00054303	chr2	+	327	1	FSM	ENSG00000187999.4	ENST00000342073.4	924	1	117	480	117	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAACCTTTGACAACCA	NA	False	NA	NA	False	AAGAAA	-13	NA	33636618	33636945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_33636600_33636900
WTC11_00054307	chr2	+	936	9	FSM	ENSG00000003509.16	ENST00000455230.5	946	9	10	0	10	0	multi-exon	FALSE	canonical	3	34	junction_4	117.541216175434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAAAACAACACACATTT	37228254	True	NA	NA	False	NA	NA	NA	37231640	37247576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237836_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455
WTC11_00054308	chr2	+	2996	9	FSM	ENSG00000003509.16	ENST00000474154.5	2974	9	-22	0	10	0	multi-exon	FALSE	canonical	1	3	junction_5	106.41244934217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228254	True	NA	13	True	AATAAA	-25	NA	37231640	37249160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243910_37243974_37246051_37246196_37247455_37247630_37248134
WTC11_00054309	chr2	+	1281	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	81.7706820593081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228280	True	NA	NA	False	AATAAA	-19	NA	37231666	37248420	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
WTC11_00054310	chr2	+	212	1	FSM	ENSG00000225402.1	ENST00000456500.1	1047	1	458	377	458	-377	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAATTCTGCATCTCTT	NA	False	NA	NA	False	NA	NA	NA	37817372	37817584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37817400_37817600
WTC11_00054312	chr2	+	636	1	FSM	ENSG00000227770.1	ENST00000446719.1	750	1	183	-69	183	69	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAAATAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	38231750	38232386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38231800_38232400
WTC11_00054313	chr2	+	769	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	-19	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	51.2072992843794	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	38874596	True	NA	1	True	AATAAA	-15	NA	38875971	38882646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
WTC11_00054314	chr2	+	3993	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	-3	0	-3	0	multi-exon	FALSE	canonical	2	26	junction_5	29.9426117765301	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	39437223	39602628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
WTC11_00054315	chr2	+	4283	5	FSM	ENSG00000231312.8	ENST00000658057.1	2349	5	-65	-1869	0	571	multi-exon	FALSE	canonical	2	16	junction_4	34.5181111881864	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCATATGATCCTTCAT	39435580	True	NA	4	True	AATAAA	-17	NA	39437376	39603199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39599365
WTC11_00054316	chr2	+	2544	7	FSM	ENSG00000231312.8	ENST00000449569.6	2536	7	-8	0	1	0	multi-exon	FALSE	canonical	2	6	junction_5	36.8510515453766	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCCGTCTCTAC	39435628	True	NA	NA	False	NA	NA	NA	39437424	39601315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39557981_39558047_39599365
WTC11_00054317	chr2	+	1914	4	FSM	ENSG00000143924.19	ENST00000480320.1	1932	4	0	18	0	-18	multi-exon	FALSE	canonical	3	607	junction_1	39.5979797464467	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCTCTACTAAAAATACAA	42282879	True	NA	NA	False	NA	NA	NA	42282908	42289895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42282973_42284633_42284704_42286268_42286380_42288226
WTC11_00054319	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_14	534.970968838497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	42558572	True	NA	8	True	AATAAA	-15	NA	42568631	42756946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
WTC11_00054320	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_12	400.541940567834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42558615	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
WTC11_00054321	chr2	+	1672	6	FSM	ENSG00000057935.14	ENST00000467925.5	1672	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	743.18030113829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTCTTAAGAAATG	42703632	False	NA	NA	False	ACTAAA	-33	NA	42703648	42753848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42704319_42707902_42708055_42708873_42709015_42718987_42719075_42722888_42723036_42753373
WTC11_00054322	chr2	+	6981	30	FSM	ENSG00000152527.14	ENST00000282406.9	6994	30	13	0	13	0	multi-exon	TRUE	canonical	2	8	junction_9	4.72048688514417	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	43636783	True	NA	9	True	AATAAA	-17	NA	43637272	43767987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
WTC11_00054323	chr2	+	3605	21	FSM	ENSG00000152527.14	ENST00000405223.6	3623	21	0	18	0	-18	multi-exon	FALSE	canonical	1	1	junction_6	5.61671612243311	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTTTCCTTAGT	43636810	True	NA	NA	False	AATAAA	-4	NA	43637299	43741347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697173_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945
WTC11_00054324	chr2	+	8334	26	NIC	ENSG00000152527.14	novel	6994	30	NA	NA	284	0	intron_retention	FALSE	canonical	2	8	junction_6	4.9289349762398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	NA	False	NA	9	True	AATAAA	-17	NA	43692513	43767987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
WTC11_00054325	chr2	+	1109	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	-3	27	-3	-27	multi-exon	FALSE	canonical	3	57	junction_2	11.9431989014669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAATAAATATCATCATC	43773339	True	NA	NA	False	ATTAAA	-41	NA	43774045	43795152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
WTC11_00054327	chr2	+	1705	6	FSM	ENSG00000138032.21	ENST00000378540.8	1703	6	-2	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	332.241117262749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTACTGCTGTTAAC	44158381	True	NA	NA	False	AATAAA	-21	NA	44168874	44244384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44244227
WTC11_00054329	chr2	+	234	2	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATGGGGGTTCAAACC	NA	False	NA	NA	False	NA	NA	NA	44348070	44412242	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_44348082_44412019
WTC11_00054330	chr2	+	727	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-154	8967	1	105	5prime_fragment	FALSE	canonical	3	14	junction_3	114.182115743034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAATTAGATAAAATTA	44358603	True	NA	NA	False	NA	NA	NA	44361950	44392178	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
WTC11_00054332	chr2	+	939	3	FSM	ENSG00000171132.14	ENST00000421201.1	939	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGATCTCTCAGGGTCGT	45651327	False	NA	NA	False	NA	NA	NA	45651344	45843034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_45651704_45651903_45652449_45842999
WTC11_00054334	chr2	+	2001	1	FSM	ENSG00000279254.1	ENST00000622979.1	1909	1	22	-114	22	114	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATAAAGTATAGTGGT	NA	False	NA	NA	False	CATAAA	-29	NA	46668891	46670892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46668900_46670900
WTC11_00054335	chr2	+	4741	2	FSM	ENSG00000171150.9	ENST00000306503.5	4771	2	8	22	8	-22	multi-exon	FALSE	canonical	1	4	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTCACCTTACAAAGAGA	46698915	False	NA	NA	False	ACTAAA	-35	NA	46698959	46763107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46699112_46758518
WTC11_00054336	chr2	+	1522	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	8	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	898.280387362981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	47345107	True	NA	-1	True	ATTAAA	-1	NA	47345165	47386900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
WTC11_00054337	chr2	+	203	1	FSM	ENSG00000207923.1	ENST00000385188.1	96	1	-142	35	-142	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTTACTTTAGGATG	47377505	False	NA	NA	False	AGTAAA	-38	NA	47377532	47377735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47377500_47377700
WTC11_00054338	chr2	+	8273	17	FSM	ENSG00000095002.15	ENST00000645506.1	7893	17	-243	-137	-191	137	multi-exon	FALSE	canonical	2	4	junction_16	639.372043003915	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGTCAGATAAAGAATCC	NA	False	NA	NA	False	AATAAA	-36	NA	47402875	47567293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47512302_47512421_47562088
WTC11_00054339	chr2	+	3965	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	-6	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	382.790275557946	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	47764657	True	NA	-8	True	NA	NA	NA	47783144	47806915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
WTC11_00054340	chr2	+	763	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGAGCTTCATGTTGA	48047240	True	NA	NA	False	NA	NA	NA	48047386	48090491	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_48047765_48090106
WTC11_00054341	chr2	+	3034	20	FSM	ENSG00000162869.16	ENST00000449090.6	3049	20	15	0	15	0	multi-exon	FALSE	canonical	0	0	junction_15	41.2901361860238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTCTATTAAAATTTG	48437513	True	NA	32	True	AATAAA	-23	NA	48440783	48515391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48498492_48498736_48507268_48507386_48510014_48510114_48511339_48511469_48514714
WTC11_00054342	chr2	+	316	2	FSM	ENSG00000068781.21	ENST00000470560.1	315	2	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAATAAAAATAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	48768960	48776481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48769075_48776279
WTC11_00054343	chr2	+	1228	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	34	0	15	multi-exon	FALSE	canonical	2	6	junction_4	21.2661703181367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCATAAAATATTATCAAC	53970059	True	NA	NA	False	AATAAA	-16	NA	53971112	54305266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
WTC11_00054344	chr2	+	427	1	FSM	ENSG00000233266.1	ENST00000437242.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCAGGCTCAGTGGCTC	NA	False	NA	NA	False	AAAAAG	-40	NA	54051333	54051760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54051300_54051800
WTC11_00054346	chr2	+	799	7	FSM	ENSG00000214595.13	ENST00000481376.7	868	7	69	0	69	0	multi-exon	TRUE	canonical	1	1	junction_2	0.763762615825973	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATTGTGGGACCAGGA	NA	False	NA	NA	False	NA	NA	NA	54948950	54960238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54948961_54950649_54950780_54952593_54952693_54953982_54954157_54957789_54957999_54959103_54959262_54960219
WTC11_00054348	chr2	+	1911	12	FSM	ENSG00000028116.18	ENST00000412104.6	1916	12	5	0	5	0	multi-exon	FALSE	canonical	1	2	junction_3	68.0117879913852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGATCACCTAGGAAAT	58046491	False	NA	57	True	AAAACA	-10	NA	58046646	58159920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
WTC11_00054349	chr2	+	1870	14	FSM	ENSG00000028116.18	ENST00000432057.2	1870	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	84.193563964342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGTAATTGGCTTT	58046616	False	NA	-79	True	NA	NA	NA	58046711	58159784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58046822_58048826_58048968_58058351_58058489_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
WTC11_00054351	chr2	+	1438	8	FSM	ENSG00000233723.10	ENST00000665478.1	2495	8	0	1057	0	-2	multi-exon	FALSE	canonical	0	0	junction_4	5.78174466995659	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATCTCATCTTGGCAT	58428125	True	NA	-1	True	AATAAA	-11	NA	58428372	58931070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58915679_58915903_58924544_58924627_58925610_58925910_58930635
WTC11_00054352	chr2	+	631	2	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	60419907	False	NA	9	True	AATAAA	-14	NA	60419921	60424691	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_60420153_60424291
WTC11_00054353	chr2	+	11108	10	FSM	ENSG00000162924.15	ENST00000394479.4	11108	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.3094010767585	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGAAATTTTGTTGCT	60880641	True	NA	18	True	AATAAA	-19	NA	60881573	60931612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920573_60920643_60921762
WTC11_00054354	chr2	+	3413	6	NNC	ENSG00000162928.9	novel	4472	4	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.2642995242236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	61017272	True	NA	9	True	AATAAA	-17	NA	61017286	61051990	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61017616_61017695_61017852_61031418_61032114_61045725_61045852_61048471_61049490_61050901
WTC11_00054355	chr2	+	4825	5	NIC	ENSG00000162928.9	novel	4472	4	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	50.236316544906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	61017272	True	NA	9	True	AATAAA	-17	NA	61017286	61051990	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61017616_61017695_61017852_61031418_61032114_61045725_61045852_61048471
WTC11_00054356	chr2	+	1108	3	FSM	ENSG00000162928.9	ENST00000401576.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTGACTATTGTCCTT	61017530	False	NA	16	True	AATAAA	-30	NA	61017561	61019081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61017616_61017695_61017852_61018183
WTC11_00054358	chr2	+	2596	10	ISM	ENSG00000162929.14	ENST00000402291.6	4578	22	39	34568	30	42	5prime_fragment	TRUE	canonical	3	50	junction_8	11.2940495640649	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTATGTTCAAAACAAGT	61063807	True	NA	NA	False	AATAAA	-31	NA	61065909	61089712	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
WTC11_00054359	chr2	+	1085	5	NIC	ENSG00000237651.8	novel	879	4	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	50.2841923470985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-12	True	AATAAA	-1	NA	61145012	61164808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
WTC11_00054360	chr2	+	1207	6	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	49.9935995903476	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-12	True	AATAAA	-1	NA	61145012	61164808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051_61163233_61164353
WTC11_00054361	chr2	+	929	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	56.966547200967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144276	True	NA	-11	True	AATAAA	-2	NA	61145140	61164809	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
WTC11_00054363	chr2	+	569	1	FSM	ENSG00000270820.7	ENST00000605437.1	569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGACATTCCTCATAGT	NA	False	NA	NA	False	AATAAA	-24	NA	61483372	61483941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61483400_61483900
WTC11_00054364	chr2	+	3786	23	NIC	ENSG00000115504.15	novel	5105	23	NA	NA	11	-66	intron_retention	FALSE	canonical	3	8	junction_15	14.6674570911478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCGAACTCTGGAGCAAAA	62704126	True	NA	NA	False	NA	NA	NA	62705662	63045434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
WTC11_00054365	chr2	+	1173	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	-365	0	-1	0	multi-exon	FALSE	canonical	3	205	junction_1	1862.16598615698	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	63588560	False	NA	-90	True	NA	NA	NA	63588607	63607091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
WTC11_00054368	chr2	+	428	1	FSM	ENSG00000234488.1	ENST00000411843.1	406	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGATGCTTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	63684282	63684710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63684300_63684700
WTC11_00054371	chr2	+	6341	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	-6	-4753	-6	2	multi-exon	FALSE	canonical	2	22	junction_3	2.44948974278318	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	64227910	True	NA	14	True	ATTAAA	-23	NA	64228383	64257612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
WTC11_00054373	chr2	+	4190	5	NNC	ENSG00000225889.10	novel	1423	5	NA	NA	0	2	intron_retention	FALSE	canonical	2	23	junction_3	13.8270568090248	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	64227976	True	NA	14	True	ATTAAA	-23	NA	64228449	64257612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251835_64252419_64253044_64254979
WTC11_00054374	chr2	+	997	2	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATCTTTGTGAAATT	64259978	False	NA	-51	True	TATAAA	-27	NA	64260001	64263740	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_64260350_64263091
WTC11_00054375	chr2	+	3996	9	NIC	ENSG00000119844.16	novel	4113	10	NA	NA	38	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_8	18.7466663703177	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTAGCCTGGTGTCTTT	64523310	True	NA	NA	False	AATAAA	-13	NA	64524342	64593002	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591887
WTC11_00054376	chr2	+	4070	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	43	0	43	0	multi-exon	FALSE	canonical	2	3	junction_7	40.8124285112716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	64523315	True	NA	NA	False	AATAAA	-8	NA	64524347	64592997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
WTC11_00054377	chr2	+	3218	4	NIC	ENSG00000011523.14	novel	5803	7	NA	NA	0	258	intron_retention	FALSE	canonical	3	39	junction_1	30.8652987457868	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTGGATTTTTGTTAA	65053836	True	NA	NA	False	NA	NA	NA	65056464	65075509	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_65056525_65069398_65069802_65071453_65072981_65074281
WTC11_00054378	chr2	+	4326	10	NNC	ENSG00000138071.15	novel	2685	10	NA	NA	-471	34310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	235.635311445462	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATCATTTTAAAG	NA	False	NA	NA	False	AAAAAG	-10	NA	65227316	65305563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563_65271252_65305532
WTC11_00054379	chr2	+	466	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64306	14	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGAGTGTTTTGTTA	65558897	True	NA	NA	False	AATAAA	-25	NA	65558965	65628438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_65559085_65562377_65562449_65628162
WTC11_00054380	chr2	+	1110	4	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_3	2.86744175568088	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATTGGTGCTTTGCTTT	66244022	True	NA	9	True	ATTAAA	-18	NA	66244231	66271856	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66244485_66246286_66246475_66258904_66259023_66271305
WTC11_00054381	chr2	+	3401	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-56	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	903	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	67324097	True	NA	18	True	AATAAA	-18	NA	67331824	67339973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337008
WTC11_00054382	chr2	+	664	3	NNC	ENSG00000169621.10	novel	3823	10	NA	NA	7	-78153	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	12	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCATCTCTGTTTTA	68466649	False	NA	NA	False	AATAAA	-17	NA	68467609	68501104	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_68467828_68490189_68490262_68500730
WTC11_00054386	chr2	+	338	1	FSM	ENSG00000225392.1	ENST00000429424.1	312	1	148	-174	148	174	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCTTATTTCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	70102698	70103036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_70102700_70103000
WTC11_00054387	chr2	+	278	1	Genic_Genomic	ENSG00000116005.12	novel	NA	NA	NA	NA	-99	-17180	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCCTTCGATGTCT	NA	False	NA	NA	False	NA	NA	NA	70257626	70257904	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_70257600_70257900
WTC11_00054388	chr2	+	603	7	FSM	ENSG00000124357.13	ENST00000531934.5	584	7	-19	0	11	0	multi-exon	FALSE	canonical	1	1	junction_3	113.445532696924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACACATCGTAGCAGT	71068241	False	NA	NA	False	NA	NA	NA	71068288	71076662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068337_71070501_71070587_71070740_71070840_71072640_71072752_71073481_71073595_71075554_71075643_71076603
WTC11_00054389	chr2	+	882	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	-4	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.4392633877203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	71066530	True	NA	-42	True	NA	NA	NA	71068587	71078585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
WTC11_00054391	chr2	+	2988	9	FSM	ENSG00000124357.13	ENST00000475709.5	2986	9	-2	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.9670767383907	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTGGACTGCATTATC	71066590	True	NA	9	True	AATAAA	-17	NA	71068647	71078636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
WTC11_00054392	chr2	+	783	2	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	181	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAAGGAAAACTACACT	71089794	False	NA	NA	False	NA	NA	NA	71089844	71090691	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_71089875_71089938
WTC11_00054393	chr2	+	2334	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	-327	61	-327	-61	multi-exon	FALSE	canonical	3	313	junction_2	12.1526746027366	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAAGGCTTGCATCC	71130282	False	NA	NA	False	NA	NA	NA	71130304	71139364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
WTC11_00054394	chr2	+	1691	2	FSM	ENSG00000124383.9	ENST00000493360.1	1584	2	-107	0	-107	0	multi-exon	FALSE	canonical	3	364	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	71147975	False	NA	16	True	AATAAA	-17	NA	71147998	71150101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71149454_71149865
WTC11_00054396	chr2	+	6476	28	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_1	102.324077006606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCATCTGTGTTTGT	71320307	True	NA	NA	False	AATAAA	-19	NA	71331773	71435052	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00054397	chr2	+	3529	13	NIC	ENSG00000075292.19	novel	6487	28	NA	NA	15	94	combination_of_known_junctions	FALSE	canonical	3	34	junction_10	163.730130261829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTTTTTTCATCCGT	71320330	True	NA	17	True	NA	NA	NA	71331796	71395764	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
WTC11_00054398	chr2	+	3715	26	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_20	137.322254569316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	71320330	True	NA	NA	False	AATAAA	-25	NA	71331796	71435058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00054399	chr2	+	4885	2	ISM	ENSG00000075292.19	ENST00000410075.5	3518	13	112686	-94	-6440	94	3prime_fragment	FALSE	canonical	3	69	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTTTTTTCATCCGT	71389267	False	NA	17	True	NA	NA	NA	71389278	71395764	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_71393646_71395246
WTC11_00054400	chr2	+	4470	9	FSM	ENSG00000075292.19	ENST00000409407.4	4470	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	184.120035574622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTTTGTGGCTGATT	71407222	False	NA	NA	False	AATAAA	-27	NA	71407238	71435060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71408780_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00054401	chr2	+	6966	55	NIC	ENSG00000135636.15	novel	6790	56	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_16	14.0336774050466	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTCAGTGTGTGTA	NA	False	NA	10	True	TATAAA	-16	NA	71453567	71686763	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
WTC11_00054402	chr2	+	1155	2	ISM	ENSG00000116096.6	ENST00000234454.6	1432	3	853	1	853	-1	3prime_fragment	FALSE	canonical	3	110	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCTTGCTTTCTCCT	72887815	False	NA	3	True	AATAAA	-17	NA	72888260	72892157	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_72888605_72891346
WTC11_00054404	chr2	+	386	2	FSM	ENSG00000272702.1	ENST00000608612.1	420	2	34	0	34	0	multi-exon	FALSE	canonical	2	6	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	NA	False	NA	2	True	AATAAA	-13	NA	73113051	73113630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73113207_73113399
WTC11_00054406	chr2	+	2625	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	71.479989429832	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210303	True	NA	13	True	AATAAA	-14	NA	73214272	73227221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
WTC11_00054407	chr2	+	12202	22	NNC	ENSG00000116127.20	novel	12428	22	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	30.8886523425256	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGTATTTTAGAAATAG	73386107	False	NA	3	True	AATAAA	-15	NA	73386362	73609715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73386405_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
WTC11_00054412	chr2	+	6248	10	FSM	ENSG00000124356.17	ENST00000339566.7	6277	10	29	0	2	0	multi-exon	FALSE	canonical	3	63	junction_1	88.6730713364938	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTAAGGCTTTGCTT	73823206	True	NA	15	True	AATAAA	-32	NA	73828944	73867168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00054413	chr2	+	6296	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	-14	-21	0	5	multi-exon	FALSE	canonical	3	39	junction_1	96.1500884355955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGCTTTGCTTTTTTG	73823237	True	NA	20	True	AATAAA	-37	NA	73828975	73867173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00054417	chr2	+	6148	11	FSM	ENSG00000124356.17	ENST00000683928.1	6145	11	-3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	104.586614822357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823289	True	NA	-1	True	AATAAA	-16	NA	73829027	73867152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
WTC11_00054419	chr2	+	390	2	FSM	ENSG00000235499.1	ENST00000441217.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCAGGAAACGACTGTG	73985121	True	NA	NA	False	NA	NA	NA	73985131	73986343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73985158_73985979
WTC11_00054420	chr2	+	7256	1	Genic_Genomic	ENSG00000187605.16	novel	NA	NA	NA	NA	53762	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGGGTTCTCTTTTT	74100903	False	NA	28	True	AATAAA	-28	NA	74100921	74108177	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_74100900_74108200
WTC11_00054422	chr2	+	1445	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	635	junction_6	47.597104691357	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	74412711	True	NA	-23	True	NA	NA	NA	74421716	74425704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
WTC11_00054423	chr2	+	2032	8	FSM	ENSG00000274049.4	ENST00000452361.5	2040	8	8	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_5	247.264379701945	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGATTTGGGTGGAC	74454110	True	NA	17	True	ATTAAA	-17	NA	74455095	74460884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74455175_74455405_74455599_74455817_74455937_74456102_74456273_74457333_74457861_74459642_74459746_74459872_74460050_74460220
WTC11_00054427	chr2	+	378	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAATAAAACAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	76573720	76574098	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_76573700_76574100
WTC11_00054428	chr2	+	707	4	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	7.76029781788188	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTTTAATTATGGATAT	76577690	False	NA	NA	False	AATAAA	-12	NA	76577702	76589953	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_76577924_76579442_76579520_76587614_76587697_76589626
WTC11_00054429	chr2	+	1805	6	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_4	7.863841300535	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATGAAGTTGTTTAGTT	76579301	True	NA	14	True	AATAAA	-27	NA	76579659	76859904	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_76579731_76587614_76587697_76772216_76772307_76854830_76855197_76857814_76857945_76858838
WTC11_00054430	chr2	+	11318	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTATTTTTTGTGAGT	77088184	True	NA	13	True	AATAAA	-25	NA	77088569	77099887	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_77088600_77099900
WTC11_00054431	chr2	+	8500	2	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	98	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTGAACATAATTTTAA	77088195	True	NA	14	True	AATAAA	-16	NA	77088580	77099836	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77090901_77093656
WTC11_00054432	chr2	+	6638	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	60.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTATTCACTGTCACT	77088196	True	NA	-5	True	AATAAA	-7	NA	77088581	77099869	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090920_77093659
WTC11_00054433	chr2	+	6646	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_2	68	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTGTCACTTATGTA	77088197	True	NA	1	True	AATAAA	-13	NA	77088582	77099875	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090920_77093656
WTC11_00054435	chr2	+	560	3	FSM	ENSG00000176407.18	ENST00000428691.5	560	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	310.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAACATGCAGAAACATC	84971952	False	NA	NA	False	NA	NA	NA	84971963	85035125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_84972246_85027888_85028057_85035015
WTC11_00054436	chr2	+	1932	10	FSM	ENSG00000115459.18	ENST00000414593.5	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	14.1813649241218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTCAGGTGTTTTTTTC	85356624	False	NA	9	True	AATAAA	-18	NA	85357079	85391752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85377343_85377475_85389750_85389828_85390137_85390266_85390759
WTC11_00054439	chr2	+	3452	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	intron_retention	FALSE	canonical	3	305	junction_5	32.392364935621	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	85509763	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
WTC11_00054440	chr2	+	3973	5	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	4	1	4	-1	intron_retention	FALSE	canonical	3	325	junction_2	13.9552857369529	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509767	True	NA	NA	False	AATAAA	-20	NA	85539171	85545280	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828
WTC11_00054441	chr2	+	3791	6	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	4	1	4	-1	intron_retention	FALSE	canonical	3	305	junction_5	17.4539393834171	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509767	True	NA	NA	False	AATAAA	-20	NA	85539171	85545280	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154
WTC11_00054442	chr2	+	812	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	313.485069642701	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571519	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
WTC11_00054443	chr2	+	517	2	FSM	ENSG00000168899.5	ENST00000462451.1	564	2	47	0	47	0	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCAGTGAGTGCCAAAG	85591156	False	NA	NA	False	NA	NA	NA	85591643	85593243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85591865_85592947
WTC11_00054444	chr2	+	855	4	FSM	ENSG00000168894.10	ENST00000441634.5	844	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	1633	junction_3	126.265153106029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGCTGTATTGATCAC	85582265	True	NA	13	True	ATTAAA	-16	NA	85595713	85597581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103
WTC11_00054445	chr2	+	1054	9	FSM	ENSG00000132300.19	ENST00000487043.5	1054	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	232.713880118913	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGGGAATTCTGTTA	86127908	False	NA	18	True	AATAAA	-29	NA	86127929	86136881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520
WTC11_00054449	chr2	+	1220	8	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	13246	34919	13246	-34919	internal_fragment	FALSE	canonical	1	3	junction_3	183.504768330417	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATAGGGAGAAACATAAA	NA	False	NA	NA	False	NA	NA	NA	87138443	87161710	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87138458_87140826_87141006_87144018_87144234_87146510_87146630_87149834_87150107_87156279_87156515_87159562_87159655_87161616
WTC11_00054451	chr2	+	2671	18	FSM	ENSG00000284879.1	ENST00000643276.1	2638	18	-33	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	210.903641554055	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	87455365	False	NA	NA	False	NA	NA	NA	87455442	87739214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_87455646_87583257_87583347_87606592_87606770_87700983_87701054_87704332_87704601_87707761_87707911_87713358_87713438_87714047_87714085_87714178_87714250_87716611_87716791_87719806_87720022_87722300_87722420_87725936_87726209_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
WTC11_00054454	chr2	+	939	2	FSM	ENSG00000287670.1	ENST00000662952.1	939	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTATTAATAATAGATT	88016893	False	NA	NA	False	TTTAAA	-39	NA	88017016	88021359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88017292_88020695
WTC11_00054455	chr2	+	2118	3	NNC	ENSG00000287670.1	novel	939	2	NA	NA	38	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	14	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	88016777	True	NA	6	True	ATTAAA	-16	NA	88017054	88022823	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_88017292_88020695_88021450_88021696
WTC11_00054456	chr2	+	2092	9	FSM	ENSG00000144115.18	ENST00000674334.2	2082	9	-10	0	-10	0	multi-exon	FALSE	canonical	1	6	junction_8	19.2028643696715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88169971	True	NA	5	True	AATAAA	-18	NA	88170335	88186627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185327_88185480_88185897
WTC11_00054457	chr2	+	4580	7	FSM	ENSG00000144115.18	ENST00000674282.1	4580	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	9.10433352249844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88170013	True	NA	5	True	AATAAA	-18	NA	88170377	88186627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
WTC11_00054460	chr2	+	2189	3	FSM	ENSG00000144115.18	ENST00000475910.1	2189	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGGGGGTGTTTCTGT	88172908	False	NA	3	True	AATAAA	-16	NA	88173272	88177141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88173374_88174638_88174834_88175248
WTC11_00054461	chr2	+	993	1	FSM	ENSG00000234028.4	ENST00000606164.1	3651	1	-347	3005	-59	-3003	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTCCAAAACCGGTGAAG	88627803	False	NA	NA	False	NA	NA	NA	88627823	88628816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88627800_88628800
WTC11_00054462	chr2	+	1329	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	285	2	-59	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	88627803	False	NA	13	True	AATAAA	-14	NA	88627823	88631819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88628733_88631399
WTC11_00054464	chr2	+	475	1	FSM	ENSG00000233158.1	ENST00000452670.1	400	1	3	-78	3	78	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTGGCTCTCATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	94912434	94912909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_94912400_94912900
WTC11_00054465	chr2	+	4744	24	FSM	ENSG00000155066.16	ENST00000317620.14	4731	24	-31	18	-31	17	multi-exon	TRUE	canonical	2	4	junction_2	3.67024514615744	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCATTACAAATGGAATA	95274012	True	NA	-7	True	AATAAA	-5	NA	95274417	95291284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95289223
WTC11_00054468	chr2	+	953	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	37	149	0	-127	multi-exon	FALSE	canonical	2	5	junction_1	24.5673676969177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	96010526	True	NA	NA	False	NA	NA	NA	96010562	96023249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
WTC11_00054469	chr2	+	1519	6	FSM	ENSG00000231584.9	ENST00000690546.1	1522	6	-1	4	0	2	multi-exon	FALSE	canonical	1	1	junction_2	28.0969749261375	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGCTTTCTGCTCAA	96010526	True	NA	11	True	AGTAAA	-17	NA	96010562	96023378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96015108_96015326_96019480_96019701_96021124_96021234_96021367_96021466_96022673
WTC11_00054470	chr2	+	1582	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	31	7	0	2	multi-exon	FALSE	canonical	3	19	junction_1	23.1678656764062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGCTTTCTGCTCAA	96010526	True	NA	11	True	AGTAAA	-17	NA	96010562	96023378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
WTC11_00054471	chr2	+	1094	5	FSM	ENSG00000231584.9	ENST00000687350.1	1114	5	20	0	-10	0	multi-exon	FALSE	canonical	3	19	junction_1	45.0998891351187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	96010546	True	NA	NA	False	AATAAA	-21	NA	96010582	96021834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96021597
WTC11_00054472	chr2	+	859	6	NIC	ENSG00000231584.9	novel	912	6	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	50.510988903406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCAGCTTGGCTTCTGC	96010568	True	NA	NA	False	AATAAA	-14	NA	96010604	96021827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96021597
WTC11_00054473	chr2	+	1810	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	9	5	0	0	multi-exon	FALSE	canonical	3	23	junction_1	87.6045660910435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010517	True	NA	13	True	AGTAAA	-19	NA	96010553	96023380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
WTC11_00054474	chr2	+	2244	4	FSM	ENSG00000204685.8	ENST00000666290.1	2974	4	0	730	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTGAGTTTTTAGTT	96208264	False	NA	10	True	AATAAA	-21	NA	96208653	96242623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96208980_96237904_96238100_96239712_96240689_96241876
WTC11_00054475	chr2	+	2668	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	-10	27	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	58.473961318258	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGAGTGTCCACTAGA	96331741	True	NA	14	True	AATAAA	-25	NA	96335785	96373842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
WTC11_00054476	chr2	+	2664	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	5	28	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	55.894797375985	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTGTCCACTAGAT	96331767	True	NA	15	True	AATAAA	-26	NA	96335811	96373843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
WTC11_00054477	chr2	+	2345	4	FSM	ENSG00000196843.17	ENST00000497920.1	2357	4	12	0	12	0	multi-exon	FALSE	canonical	3	22	junction_1	24.0878023535196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	NA	False	NA	19	True	AATAAA	-21	NA	96547401	96552634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96547518_96549752_96550286_96550573_96550734_96551098
WTC11_00054479	chr2	+	3509	14	FSM	ENSG00000135976.21	ENST00000421946.2	4201	14	692	0	692	0	multi-exon	FALSE	canonical	2	4	junction_4	10.9722619611627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTCATATATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	97213418	97249050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97213448_97213541_97213615_97215300_97215330_97215424_97215498_97217176_97217206_97217299_97217373_97219049_97219079_97219173_97219247_97224808_97224880_97233729_97233872_97241265_97241480_97243845_97244030_97245156_97246072_97247475
WTC11_00054481	chr2	+	1046	7	FSM	ENSG00000115085.14	ENST00000483781.5	1469	7	-16	439	-10	-81	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGGGGCACCTGGA	NA	False	NA	NA	False	GGGGCT	-43	NA	97713565	97733343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97713675_97713915_97713995_97724015_97724439_97725091_97725253_97732882_97733022_97733124_97733213_97733296
WTC11_00054482	chr2	+	298	1	FSM	ENSG00000235734.4	ENST00000446623.2	298	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATAACCATATACCATG	NA	False	NA	NA	False	NA	NA	NA	97827247	97827545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97827200_97827500
WTC11_00054483	chr2	+	10017	26	FSM	ENSG00000040933.16	ENST00000409016.8	9996	26	-21	0	-21	0	multi-exon	FALSE	canonical	1	3	junction_13	37.1269390066027	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATTACTGAGAATGATG	98441089	True	NA	NA	False	ATTAAA	-12	NA	98444832	98594390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
WTC11_00054484	chr2	+	9962	25	NNC	ENSG00000040933.16	novel	9996	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_17	42.0322090452337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATTACTGAGAATGATG	98441114	True	NA	NA	False	ATTAAA	-12	NA	98444857	98594390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548951_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
WTC11_00054486	chr2	+	706	1	FSM	ENSG00000231822.1	ENST00000424783.1	735	1	24	5	24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATTGGAAAATACTACT	NA	False	NA	NA	False	NA	NA	NA	99102041	99102747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99102000_99102700
WTC11_00054487	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3970762682174	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	99141292	True	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
WTC11_00054488	chr2	+	626	1	FSM	ENSG00000273306.1	ENST00000608144.1	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTATTTTTGTATTTATA	99405198	False	NA	NA	False	AATAAA	-22	NA	99405217	99405843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99405200_99405800
WTC11_00054491	chr2	+	641	3	FSM	ENSG00000071082.11	ENST00000409000.5	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGGGGTGAGGGTCGC	100847245	True	NA	NA	False	AATAAA	-21	NA	101002228	101004604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157
WTC11_00054494	chr2	+	781	4	FSM	ENSG00000071082.11	ENST00000419276.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6722.77328687103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTCTTTTTAGTT	100847327	True	NA	31	True	AATAAA	-19	NA	101002310	101006423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004362_101005958
WTC11_00054496	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7691.06498910695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	101002253	True	NA	5	True	AATAAA	-28	NA	101002738	101024032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
WTC11_00054497	chr2	+	7640	29	NIC	ENSG00000071054.17	novel	7600	31	NA	NA	-358	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_18	49.5941050438663	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGCATGAGTTT	101696675	True	NA	33	True	AATAAA	-16	NA	101697348	101894689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00054498	chr2	+	7724	29	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	-351	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_18	49.0556093237302	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGGCATGAGT	101696682	False	NA	31	True	AATAAA	-14	NA	101697355	101894687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00054500	chr2	+	2739	18	NIC	ENSG00000071054.17	novel	3416	22	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	84.3946898081868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	101855943	True	NA	25	True	AATAAA	-38	NA	101856001	101891496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00054502	chr2	+	1783	4	FSM	ENSG00000170417.16	ENST00000469971.5	670	4	-10	-1103	-10	1103	multi-exon	FALSE	canonical	1	2	junction_3	12.5521135891752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCAGGTTTTTTTG	102736506	True	NA	NA	False	AATAAA	-14	NA	102736921	102776621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102775129
WTC11_00054503	chr2	+	648	4	FSM	ENSG00000170417.16	ENST00000488134.5	624	4	-24	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	13.490737563232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTTCAGTAAGAAG	102736506	True	NA	NA	False	NA	NA	NA	102736921	102815104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102814747
WTC11_00054504	chr2	+	1100	2	FSM	ENSG00000228528.2	ENST00000666357.1	1472	2	521	-149	303	89	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACGGTGCATTGTAAT	104703660	True	NA	104	True	AATAAA	-9	NA	104703759	104705902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_104703808_104704850
WTC11_00054505	chr2	+	700	3	FSM	ENSG00000226508.1	ENST00000438148.1	415	3	-244	-41	-215	41	multi-exon	TRUE	canonical	1	1	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCTTGACATGCTTGGA	105143684	True	NA	NA	False	AATAAA	-20	NA	105143897	105145465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_105144176_105144488_105144696_105145250
WTC11_00054506	chr2	+	732	1	ISM	ENSG00000196862.10	ENST00000408999.4	7212	23	45007	19914	45007	-19914	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGTCTGTTAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	107871898	107872630	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_107871900_107872600
WTC11_00054507	chr2	+	892	1	ISM	ENSG00000196862.10	ENST00000408999.4	7212	23	64088	673	64088	-673	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTCCTCTGAATAAC	NA	False	NA	NA	False	NA	NA	NA	107890979	107891871	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_107891000_107891900
WTC11_00054508	chr2	+	3635	4	FSM	ENSG00000198203.10	ENST00000495441.1	6366	4	2731	0	2731	0	multi-exon	FALSE	canonical	3	12	junction_1	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	NA	False	NA	4	True	AATAAA	-15	NA	108301703	108308713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108304701_108305171_108305267_108305414_108305596_108308351
WTC11_00054509	chr2	+	4598	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	-33	-2938	-18	140	multi-exon	FALSE	canonical	3	19	junction_1	27.2967234500977	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAATGGTGTAGTCTTCC	108621023	True	NA	NA	False	AATAAA	-43	NA	108621232	108687386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
WTC11_00054511	chr2	+	6718	16	ISM	ENSG00000015568.13	ENST00000016946.8	7268	23	24788	14	-85	-4	3prime_fragment	FALSE	canonical	3	127	junction_6	26.8134294710692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTATGTTACCCACT	NA	False	NA	NA	False	ATTAAA	-20	NA	109819092	109857691	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
WTC11_00054512	chr2	+	4328	3	FSM	ENSG00000015568.13	ENST00000477523.1	6902	3	2574	0	2574	0	multi-exon	FALSE	canonical	3	190	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACCCACTGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	109842950	109857695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_109845243_109847809_109848012_109855861
WTC11_00054519	chr2	+	11519	12	FSM	ENSG00000188177.14	ENST00000409871.6	11539	12	20	0	16	0	multi-exon	FALSE	canonical	2	12	junction_11	6.85505182600322	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTGGCAGTGTGAT	112274403	True	NA	NA	False	AATAAA	-15	NA	112275616	112340059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112276027_112299848_112300030_112303228_112303352_112309884_112310162_112311803_112311938_112316469_112316587_112317220_112317333_112321755_112321866_112322648_112322903_112324151_112324664_112324963_112325198_112331004
WTC11_00054520	chr2	+	13445	6	ISM	ENSG00000114999.8	ENST00000233336.7	14267	7	54	9023	11	305	intron_retention	FALSE	canonical	3	125	junction_1	9.62496753241277	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACCATGTAGGGCCTTT	112479019	True	NA	-1	True	AATAAA	-14	NA	112482209	112532716	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_112482502_112485916_112485996_112494142_112494376_112501205_112501342_112502911_112503182_112520281
WTC11_00054521	chr2	+	776	2	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCAGATTTTTGG	112850051	True	NA	9	True	AATAAA	-18	NA	112850144	112863513	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_112850323_112862915
WTC11_00054522	chr2	+	5180	6	FSM	ENSG00000189223.15	ENST00000661674.1	8258	6	-17	3095	0	2812	multi-exon	FALSE	canonical	2	9	junction_2	9.38083151964686	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCGCACACACAGCATAA	113234936	True	NA	NA	False	ATTAAA	-39	NA	113235518	113269822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113235571_113238089_113238213_113255389_113255550_113259263_113259585_113263277_113263455_113265475
WTC11_00054523	chr2	+	4859	5	FSM	ENSG00000189223.15	ENST00000451179.6	7967	5	13	3095	0	2812	multi-exon	FALSE	canonical	1	1	junction_3	13.9171656597168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCGCACACACAGCATAA	113234936	True	NA	NA	False	ATTAAA	-39	NA	113235518	113269822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113235571_113238089_113238213_113255389_113255550_113263277_113263455_113265475
WTC11_00054526	chr2	+	1689	10	ISM	ENSG00000146556.15	ENST00000691953.1	1955	11	4892	1	-3	-1	3prime_fragment	TRUE	canonical	3	22	junction_4	81.8233568633985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGCTTTTAATAAAG	113588425	False	NA	NA	False	AATAAA	-18	NA	113588546	113599040	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598467_113598606
WTC11_00054527	chr2	+	2065	8	FSM	ENSG00000144134.19	ENST00000450954.5	2041	8	-24	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	63.9361926821881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATGACA	113626841	True	NA	-12	True	NA	NA	NA	113627239	113643368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113641352_113641481_113641780_113641865_113642030
WTC11_00054528	chr2	+	1120	10	FSM	ENSG00000144134.19	ENST00000393165.7	1118	10	-4	2	0	0	multi-exon	FALSE	canonical	2	11	junction_9	54.5298649626011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTGAGTAAATGTATG	113626841	True	NA	9	True	AGTAAA	-14	NA	113627239	113643389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030_113642146_113643189
WTC11_00054529	chr2	+	1976	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.206254514306	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTGAGTAAATGTATG	113626841	True	NA	9	True	AGTAAA	-14	NA	113627239	113643389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
WTC11_00054531	chr2	+	2232	8	FSM	ENSG00000144134.19	ENST00000409121.6	2232	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	50.9369357988035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113627929	False	NA	12	True	AGTAAA	-17	NA	113628327	113643392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
WTC11_00054535	chr2	+	6027	3	FSM	ENSG00000236255.2	ENST00000439955.1	968	3	-1628	-3431	785	3	multi-exon	FALSE	canonical	2	7	junction_2	3.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAATGGTTGCGTACT	117834709	False	NA	-20	True	NA	NA	NA	117834721	117841635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_117836525_117836654_117836901_117837657
WTC11_00054537	chr2	+	3949	6	FSM	ENSG00000115107.20	ENST00000393106.6	3915	6	-34	0	-34	0	multi-exon	FALSE	canonical	2	11	junction_1	77.3444244920085	4294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	119221494	True	NA	15	True	AATAAA	-19	NA	119223796	119265652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119223889_119239362_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
WTC11_00054538	chr2	+	3909	5	ISM	ENSG00000115107.20	ENST00000393106.6	3915	6	15480	0	15458	0	3prime_fragment	FALSE	canonical	3	23	junction_1	66.3513375901345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	NA	False	NA	15	True	AATAAA	-19	NA	119239310	119265652	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
WTC11_00054539	chr2	+	785	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	-11	0	0	0	multi-exon	FALSE	canonical	1	26	junction_1	2607.62501564589	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	119341131	True	NA	-41	True	NA	NA	NA	119367069	119372454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
WTC11_00054540	chr2	+	893	2	FSM	ENSG00000144120.13	ENST00000496203.5	881	2	-12	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTTGGCAGCAGCTGAA	119673338	True	NA	NA	False	NA	NA	NA	119679190	119686464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119679277_119685657
WTC11_00054544	chr2	+	4978	9	ISM	ENSG00000115109.14	ENST00000263713.10	6556	25	110594	4116	22961	-858	3prime_fragment	FALSE	canonical	3	66	junction_7	14.1575951347678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAAAAAGCTGCACGTA	NA	False	NA	NA	False	NA	NA	NA	120123670	120175003	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167876_120168008_120174840
WTC11_00054545	chr2	+	2365	5	NIC	ENSG00000144118.14	novel	981	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	128.270222577183	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	120253424	False	NA	-1	True	AAAACA	-30	NA	120253450	120294676	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_120253732_120278617_120278779_120285873_120286083_120289579_120289758_120293140
WTC11_00054546	chr2	+	7027	14	NIC	ENSG00000074047.22	novel	7136	14	NA	NA	5	-155	intron_retention	FALSE	canonical	3	18	junction_8	44.4386419617914	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTTGTCTATCTGCT	120732605	True	NA	28	True	ATTAAA	-18	NA	120735872	120992498	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_120736286_120797290_120797469_120927360_120927467_120951242_120951446_120955244_120955431_120968713_120968916_120970392_120970607_120971940_120972064_120974923_120975110_120978433_120978584_120982715_120982881_120984470_120984744_120986277_120986615_120988207
WTC11_00054547	chr2	+	251	1	FSM	ENSG00000264229.1	ENST00000580972.1	127	1	9	-133	9	133	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCGGTGATTAAACGGGA	121530605	False	NA	NA	False	AGTAAA	-13	NA	121530889	121531140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121530900_121531100
WTC11_00054548	chr2	+	1232	4	FSM	ENSG00000236859.8	ENST00000662168.1	1232	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.67241208569794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	NA	False	NA	5	True	AATAAA	-18	NA	121649620	121728563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121649737_121650467_121650683_121705767_121705908_121727802
WTC11_00054549	chr2	+	1337	2	FSM	ENSG00000236859.8	ENST00000671498.1	1322	2	-15	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	NA	False	NA	20	True	ACTAAA	-20	NA	121649643	121651536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121649912_121650467
WTC11_00054550	chr2	+	1416	4	FSM	ENSG00000236859.8	ENST00000419902.3	1416	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.4406682011537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	121650057	False	NA	5	True	AATAAA	-18	NA	121650081	121728563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121650382_121650467_121650683_121705767_121705908_121727802
WTC11_00054552	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	99.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	126654020	True	NA	12	True	AATAAA	-14	NA	126656183	126696664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_126656313_126693863_126693948_126695945
WTC11_00054557	chr2	+	2998	1	FSM	ENSG00000222014.6	ENST00000410061.4	3073	1	70	5	70	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGCAGATGGGTCATAT	NA	False	NA	NA	False	AATAAA	-11	NA	129979735	129982733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_129979700_129982700
WTC11_00054558	chr2	+	603	3	FSM	ENSG00000152082.15	ENST00000651060.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	893.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGATGCAGAGGGT	130170237	True	NA	13	True	AATAAA	-2	NA	130182223	130190699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182447_130182626_130182776_130190468
WTC11_00054560	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130182447	True	NA	41	True	AATAAA	-30	NA	130182554	130190727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182776_130190468
WTC11_00054561	chr2	+	3630	15	FSM	ENSG00000072135.13	ENST00000175756.10	3616	15	-14	0	-3	0	multi-exon	TRUE	canonical	2	14	junction_2	26.7197282462045	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130355463	True	NA	11	True	AATAAA	-17	NA	130356041	130375405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
WTC11_00054562	chr2	+	935	8	ISM	ENSG00000072135.13	ENST00000175756.10	3616	15	34	4987	24	-9	5prime_fragment	FALSE	canonical	2	14	junction_2	32.5024331899214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATATAATCTGAAGATTC	130355511	True	NA	0	True	ATTAAA	-16	NA	130356089	130370418	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047
WTC11_00054563	chr2	+	5598	9	NIC	ENSG00000072135.13	novel	3616	15	NA	NA	-1846	0	intron_retention	FALSE	canonical	3	46	junction_3	18.8874131367956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	NA	False	NA	11	True	AATAAA	-17	NA	130367050	130375405	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_130369202_130369764_130369828_130370047_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
WTC11_00054564	chr2	+	444	5	FSM	ENSG00000240253.6	ENST00000447059.5	604	5	160	0	160	0	multi-exon	FALSE	canonical	1	3	junction_1	26.7710197788579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAGCTGAGTCAATGG	NA	False	NA	NA	False	NA	NA	NA	130690292	130702428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130690324_130691534_130691580_130695466_130695592_130696341_130696410_130702253
WTC11_00054565	chr2	+	2869	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-317	310	intron_retention	FALSE	canonical	3	38	junction_2	9.98799279134702	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAACCCAGATTAACCT	130692840	True	NA	NA	False	AATAAA	-41	NA	130692964	130704771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
WTC11_00054567	chr2	+	3876	20	NNC	ENSG00000152117.18	novel	2762	19	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_19	50.1023882412727	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131491149	True	NA	34	True	AATAAA	-18	NA	131493092	131521573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500351_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131502454_131502693_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131519813_131519943_131520096
WTC11_00054568	chr2	+	2107	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	12	0	2	0	multi-exon	FALSE	canonical	2	5	junction_5	15.0811140172071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	131681547	True	NA	NA	False	AATGAA	-4	NA	131682492	131698401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
WTC11_00054569	chr2	+	1097	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	28	44455	12	-96	5prime_fragment	FALSE	canonical	3	8	junction_1	12.3515181253156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAGCTTTTACATAA	131681557	True	NA	10	True	AATAAA	-22	NA	131682502	131722949	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
WTC11_00054573	chr2	+	8611	18	NIC	ENSG00000152127.9	novel	8252	17	NA	NA	-58	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.6095380015081	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTTCTTGTGTGAC	134117374	True	NA	4	True	NA	NA	NA	134119924	134454602	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134120292_134253094_134253219_134254264_134254645_134270385_134270551_134317528_134317606_134318649_134318740_134336216_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
WTC11_00054575	chr2	+	5179	10	NIC	ENSG00000082258.13	novel	4491	10	NA	NA	2	393	combination_of_known_junctions	FALSE	canonical	3	92	junction_6	112.783415294236	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTCATTTTTAAGTT	134913370	True	NA	NA	False	ATTAAA	-29	NA	134918848	134957410	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946466_134947735_134947900_134952640_134952712_134953229_134954380_134954480
WTC11_00054577	chr2	+	4497	24	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	65.5002849962775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCTCACTTTGTCTTT	135525733	True	NA	NA	False	AATAAA	-11	NA	135531526	135725265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641791_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00054578	chr2	+	4402	25	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	77.2337721178731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	135525733	True	NA	NA	False	AATAAA	-12	NA	135531526	135725266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641605_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00054579	chr2	+	3394	9	FSM	ENSG00000144224.17	ENST00000490163.5	3394	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	171.786522681496	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTACCTTGCATCTTG	135754130	False	NA	NA	False	AATAAA	-15	NA	135754151	135785055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135754278_135755516_135755692_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
WTC11_00054581	chr2	+	811	1	FSM	ENSG00000233045.1	ENST00000429515.1	637	1	-92	-82	-92	82	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAAACTAGTCTGCAGA	NA	False	NA	NA	False	AATAAA	-42	NA	138278481	138279292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_138278500_138279300
WTC11_00054582	chr2	+	1194	4	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	6.68331255192114	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGTCTATATTTTA	139835050	True	NA	NA	False	AATAAA	-29	NA	139835352	139871308	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_139835413_139835588_139835660_139868003_139868079_139870320
WTC11_00054583	chr2	+	343	5	FSM	ENSG00000115919.15	ENST00000460143.1	703	5	0	360	0	-360	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTATATGAGAAAGAAAGAAA	NA	False	NA	NA	False	GATAAA	-11	NA	142918678	142957715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_142918730_142927658_142927742_142954809_142954872_142956202_142956275_142957640
WTC11_00054584	chr2	+	4137	8	ISM	ENSG00000204406.14	ENST00000638043.2	7019	14	139	43217	15	-1339	5prime_fragment	FALSE	canonical	1	3	junction_4	4.30471976380553	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGAATTTTTAATCTT	148021623	False	NA	10	True	AATAAA	-21	NA	148021644	148471116	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_148021685_148178699_148178794_148233244_148233396_148342213_148342337_148458202_148458872_148462581_148462685_148463738_148463920_148468340
WTC11_00054586	chr2	+	283	1	FSM	ENSG00000232238.1	ENST00000445109.1	171	1	-19	-93	-19	93	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCAATTCTATTGAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	148595138	148595421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148595100_148595400
WTC11_00054588	chr2	+	1267	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	-19	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	4.66476151587624	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	149038456	True	NA	NA	False	AATAAA	-18	NA	149038698	149215256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
WTC11_00054589	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.87130498460285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	149038456	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
WTC11_00054590	chr2	+	877	4	NIC	ENSG00000187123.15	novel	4011	5	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	24.6080384337223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTGCATTTATC	149329670	True	NA	3	True	CATAAA	-19	NA	149330590	149471107	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_149330723_149437637_149437827_149468644_149468776_149470682
WTC11_00054591	chr2	+	9723	36	NIC	ENSG00000080345.18	novel	14662	36	NA	NA	16	1721	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	52.8089664619135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTGTCTTAATTGT	151398731	True	NA	19	True	AATAAA	-24	NA	151409917	151477343	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00054592	chr2	+	9786	36	NNC	ENSG00000080345.18	novel	14662	36	NA	NA	-16	1721	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_16	49.2382462924827	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTGTCTTAATTGT	151398738	True	NA	19	True	AATAAA	-24	NA	151409924	151477343	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00054593	chr2	+	9854	27	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	17875	-1722	7533	1722	3prime_fragment	FALSE	canonical	0	0	junction_8	55.288070232729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTGTCTTAATTGTC	151427740	False	NA	20	True	AATAAA	-25	NA	151427757	151477344	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
WTC11_00054594	chr2	+	5767	27	NNC	ENSG00000157827.20	novel	5630	26	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	27.7349298063101	451	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	152329733	True	NA	23	True	AATAAA	-16	NA	152335130	152649826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152645433_152645528_152647795
WTC11_00054595	chr2	+	319	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGCAGCACGAGGGCG	NA	False	NA	NA	False	NA	NA	NA	152389407	152389726	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_152389400_152389700
WTC11_00054599	chr2	+	743	1	FSM	ENSG00000231158.1	ENST00000420539.1	515	1	-469	241	-469	-241	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGAACCTCATTGTT	NA	False	NA	NA	False	NA	NA	NA	158065075	158065818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_158065100_158065800
WTC11_00054600	chr2	+	4427	21	NNC	ENSG00000144283.23	novel	5777	21	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	36.0783522351008	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGTTCTCTATTCTT	158455211	True	NA	19	True	AATAAA	-20	NA	158456985	158681425	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621116_158621230_158621422_158624877_158625428_158631752_158631942_158634072_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
WTC11_00054603	chr2	+	4298	21	NNC	ENSG00000144283.23	novel	4603	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.1048270677675	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCTATTCTTTTTA	158457122	False	NA	23	True	AATAAA	-24	NA	158457137	158681429	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158457219_158533179_158533317_158603069_158603105_158620989_158621116_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
WTC11_00054605	chr2	+	1219	1	FSM	ENSG00000213189.5	ENST00000392798.3	346	1	-460	-413	-460	413	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAACCAATATTTGC	NA	False	NA	NA	False	AATAAA	-28	NA	159003514	159004733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159003500_159004700
WTC11_00054606	chr2	+	1370	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	130	1551	130	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCGTTTTAAAGTTATAT	159615214	False	NA	16	True	AATAAA	-23	NA	159615423	159617086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159615454_159615746
WTC11_00054607	chr2	+	3303	8	FSM	ENSG00000136536.15	ENST00000539065.5	3303	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	356.226939819353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTTTCCTTTTAAAC	159712230	False	NA	21	True	AATAAA	-26	NA	159712456	159768583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159767283
WTC11_00054608	chr2	+	3190	4	ISM	ENSG00000136560.14	ENST00000432692.6	576	7	-90	17182	-6	2479	5prime_fragment	FALSE	canonical	3	80	junction_1	38.9386982604994	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGCTTTCTCTTTTTTT	161157683	True	NA	13	True	AATAAA	-23	NA	161160337	161207458	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674
WTC11_00054609	chr2	+	905	6	FSM	ENSG00000136560.14	ENST00000468831.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	33.6962905970375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACTTTCTTACATAGCA	NA	False	NA	NA	False	NA	NA	NA	161179482	161231175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970
WTC11_00054610	chr2	+	2345	3	FSM	ENSG00000227403.3	ENST00000655684.2	2441	3	46	50	12	-5	multi-exon	FALSE	canonical	1	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTTGCATTCTCTAT	161244556	True	NA	NA	False	ATTAAA	-11	NA	161244765	161249045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161244896_161245423_161245468_161246874
WTC11_00054611	chr2	+	577	6	FSM	ENSG00000115233.12	ENST00000437630.1	577	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	706.81726068341	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTTGATCCAGTGTTC	161293473	False	NA	NA	False	NA	NA	NA	161308599	161370119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161308787_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106
WTC11_00054612	chr2	+	5481	25	FSM	ENSG00000144290.17	ENST00000272716.9	3414	25	-42	-2025	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	1.25554326444328	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATACAAAGTGTCTTG	161624308	True	NA	NA	False	AATAAA	-32	NA	161624383	161985270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161624567_161770972_161771055_161804448_161804596_161839788_161839928_161854969_161855131_161862873_161863063_161872292_161872385_161879130_161879289_161882356_161882445_161894678_161894826_161900910_161901012_161904003_161904179_161904775_161904910_161905641_161905888_161942791_161942898_161947565_161947728_161949147_161949262_161950686_161950849_161956988_161957241_161958486_161958556_161964134_161964309_161965050_161965174_161974248_161974317_161976759_161976877_161983178
WTC11_00054614	chr2	+	11753	7	FSM	ENSG00000178662.16	ENST00000651982.1	11737	7	-1	-15	-1	15	multi-exon	TRUE	canonical	1	5	junction_3	9.17726659862414	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCCTGTTGTGTAAAA	165468141	True	NA	25	True	AGTAAA	-34	NA	165469696	165689422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311_165676609_165678700
WTC11_00054617	chr2	+	2861	14	FSM	ENSG00000138398.17	ENST00000448752.7	2861	14	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	128.840665784384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCGGTTTCTTTTAATTA	169591865	False	NA	NA	False	TATAAA	-10	NA	169592650	169637961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169592740_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00054619	chr2	+	2606	2	FSM	ENSG00000204335.4	ENST00000375281.4	2047	2	-416	-143	-416	143	multi-exon	FALSE	canonical	1	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCGAGACTGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	170714920	170718221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170715564_170716258
WTC11_00054620	chr2	+	1292	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	117	2	-21	0	multi-exon	FALSE	canonical	2	3	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	170770675	True	NA	NA	False	AATAAA	-11	NA	170771026	170778725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170771188_170777376_170777426_170777643
WTC11_00054622	chr2	+	546	2	FSM	ENSG00000115806.13	ENST00000488928.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTACATATCTA	170949984	False	NA	NA	False	AAAAAG	-32	NA	170950031	170951614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170950291_170951327
WTC11_00054624	chr2	+	1281	8	NIC	ENSG00000115827.14	novel	5623	12	NA	NA	80	-5195	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	30.1540263666803	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGTGTATCACCCA	171431716	True	NA	NA	False	AATATA	-5	NA	171434330	171469189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171468887
WTC11_00054625	chr2	+	510	1	FSM	ENSG00000228507.1	ENST00000458547.1	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACAATCACAATATGTGA	171491392	False	NA	NA	False	NA	NA	NA	171491421	171491931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171491400_171491900
WTC11_00054627	chr2	+	3845	11	FSM	ENSG00000128708.13	ENST00000494601.5	3845	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	251.847354562243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAATGTGTGATGATA	171911350	False	NA	4	True	AATAAA	-14	NA	171922606	171983623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171924928_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
WTC11_00054628	chr2	+	3295	25	NIC	ENSG00000091409.16	novel	5488	26	NA	NA	3	-136	combination_of_known_junctions	FALSE	canonical	3	58	junction_20	93.8382085027202	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGACAGTGTTCCCCGAT	172418488	True	NA	NA	False	TTTAAA	-12	NA	172427588	172504116	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489614_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172504090
WTC11_00054630	chr2	+	3231	9	NIC	ENSG00000144354.14	novel	2500	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	76	junction_4	221.589393642837	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341441	True	NA	15	True	AATAAA	-14	NA	173354883	173368904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173363999_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
WTC11_00054633	chr2	+	5626	10	FSM	ENSG00000170144.21	ENST00000676736.1	5626	10	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_4	1174.81620311907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142971	True	NA	-32	True	NA	NA	NA	177212748	177223920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
WTC11_00054634	chr2	+	624	1	FSM	ENSG00000237178.2	ENST00000453859.2	394	1	17	-247	17	247	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGATAAAAATATGCACA	NA	False	NA	NA	False	NA	NA	NA	177344459	177345083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177344500_177345100
WTC11_00054636	chr2	+	6866	24	FSM	ENSG00000079156.17	ENST00000359685.7	7114	24	0	248	0	-248	multi-exon	FALSE	canonical	2	10	junction_13	11.0422799760712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCTCTAGAAATGTT	178194011	True	NA	3	True	ATTAAA	-15	NA	178194480	178399184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
WTC11_00054637	chr2	+	1065	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	300	0	4	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	178413213	True	NA	NA	False	AATAAA	-16	NA	178413953	178434091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178414114_178430694_178430890_178433381
WTC11_00054641	chr2	+	639	2	FSM	ENSG00000115232.14	ENST00000476089.1	1846	2	133	1074	-51	-1074	multi-exon	FALSE	canonical	3	10	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGGGTATGGGACCA	NA	False	NA	NA	False	NA	NA	NA	181457334	181458317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181457852_181458195
WTC11_00054642	chr2	+	6745	28	FSM	ENSG00000115232.14	ENST00000397033.7	6781	28	0	36	0	-36	multi-exon	FALSE	canonical	1	3	junction_2	2.40084575861361	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATAAATGTAAAGTTGC	181457280	True	NA	NA	False	AAGAAA	-23	NA	181457385	181538904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657_181509808_181511698_181511776_181522190_181522342_181523436_181523533_181524170_181524251_181525201_181525292_181527296_181527388_181529540_181529649_181530523_181530650_181531656_181531777_181534271_181534371_181534815_181534936_181535431
WTC11_00054644	chr2	+	6038	24	NIC	ENSG00000077232.19	novel	21051	25	NA	NA	0	-14857	intron_retention	FALSE	canonical	3	36	junction_11	121.482866925842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTGTCTATTCTGAT	182704138	True	NA	7	True	AATAAA	-23	NA	182716259	182779607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182739544_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
WTC11_00054645	chr2	+	5281	24	NNC	ENSG00000077232.19	novel	20144	24	NA	NA	0	-14857	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_19	129.236203206693	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTGTCTATTCTGAT	182704138	True	NA	7	True	AATAAA	-23	NA	182716259	182779607	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758839_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
WTC11_00054647	chr2	+	4916	6	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	0	4020	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	11.8928549978548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTTTTAAATATTTATC	185424195	True	NA	6	True	AATAAA	-16	NA	185425062	185509628	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_185425508_185434096_185434192_185483033_185483092_185496374_185496515_185502662_185502740_185505527
WTC11_00054648	chr2	+	3314	4	FSM	ENSG00000286797.1	ENST00000671641.1	3314	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	12.2836838484589	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATGAGCAGGCA	185425275	False	NA	NA	False	NA	NA	NA	185425292	185505608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_185425508_185434096_185434192_185483033_185483092_185502662
WTC11_00054649	chr2	+	288	2	FSM	ENSG00000188738.16	ENST00000465275.1	348	2	60	0	60	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTTGAAAATTACTTCT	185739250	False	NA	NA	False	AATAAA	-1	NA	185739345	185743294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_185739472_185743132
WTC11_00054650	chr2	+	231	1	FSM	ENSG00000227692.1	ENST00000444288.1	531	1	-226	526	-226	-526	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCACCAGGTGTTATGT	NA	False	NA	NA	False	AAGAAA	-19	NA	186364371	186364602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_186364400_186364600
WTC11_00054652	chr2	+	269	1	FSM	ENSG00000231739.2	ENST00000435908.1	267	1	-2	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCACATGGCCTCCA	NA	False	NA	NA	False	AATGAA	-28	NA	187415549	187415818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_187415500_187415800
WTC11_00054656	chr2	+	505	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	4.5	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTAATGTATTATTTA	NA	False	NA	4	True	AATAAA	-19	NA	189762703	189765553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189762993_189764854_189764976_189765458
WTC11_00054657	chr2	+	4035	2	FSM	ENSG00000187699.10	ENST00000340623.4	4035	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTGAGCTCTTATTTA	190180842	True	NA	NA	False	AATAAA	-18	NA	190180862	190203484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190181110_190199696
WTC11_00054658	chr2	+	832	2	FSM	ENSG00000151689.13	ENST00000470892.1	832	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATCGCATATTTGGGG	NA	False	NA	NA	False	NA	NA	NA	190368643	190371041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190369278_190370843
WTC11_00054659	chr2	+	4785	7	NIC	ENSG00000151690.15	novel	4796	8	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	4.94694069321861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTTGAGATTTTGTA	190408196	False	NA	NA	False	ATTAAA	-17	NA	190408243	190502314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190408504_190435976_190437562_190469757_190469856_190488656_190488819_190489767_190489867_190497438_190497720_190500014
WTC11_00054660	chr2	+	4526	6	FSM	ENSG00000151690.15	ENST00000281416.11	4608	6	82	0	82	0	multi-exon	FALSE	canonical	3	16	junction_5	4.2614551505325	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTTGAGATTTTGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	190435976	190502315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190437562_190469757_190469856_190488656_190488819_190489767_190489867_190497438_190497720_190500014
WTC11_00054661	chr2	+	4268	9	NIC	ENSG00000138386.17	novel	2472	7	NA	NA	-98	0	intron_retention	FALSE	canonical	1	1	junction_1	41.7851648315524	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	190648171	True	NA	19	True	AATAAA	-19	NA	190648796	190692766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190648972_190655976_190656154_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
WTC11_00054662	chr2	+	3861	8	NNC	ENSG00000138386.17	novel	2472	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	38.4150268217307	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	190648269	True	NA	19	True	AATAAA	-19	NA	190648894	190692766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_190648959_190659276_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
WTC11_00054663	chr2	+	4522	10	FSM	ENSG00000138386.17	ENST00000337386.10	4508	10	-14	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	46.070263031618	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	190648443	False	NA	19	True	AATAAA	-19	NA	190649068	190692766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190649361_190649845_190649983_190655976_190656154_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
WTC11_00054664	chr2	+	9417	7	FSM	ENSG00000173559.15	ENST00000674172.1	9440	7	-9	32	0	-32	multi-exon	FALSE	canonical	2	4	junction_6	15.7312498620492	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCTCTTATTTAATAAAG	191677744	True	NA	NA	False	AATAGA	-6	NA	191678126	191696630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598_191693417_191695964
WTC11_00054665	chr2	+	2389	1	Genic_Genomic	ENSG00000286358.1	novel	NA	NA	NA	NA	45	372	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGCTATAAGTTTCA	193170131	True	NA	NA	False	AATAAA	-21	NA	193170748	193173137	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_193170700_193173100
WTC11_00054667	chr2	+	2794	22	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	26.3908353501019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGATGGTGTTGCATAA	196637987	True	NA	8	True	AATAAA	-23	NA	196639714	196732796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719667_196720574_196720669_196721521_196721692_196725972_196726100_196729792_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
WTC11_00054668	chr2	+	3715	25	NNC	ENSG00000144395.18	novel	3597	28	NA	NA	12	-7	intron_retention	FALSE	canonical	0	0	junction_3	29.3096495297292	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTATGATAGGAGATG	196637999	True	NA	-3	True	AATAAA	-12	NA	196639726	196732785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_196639779_196646340_196646505_196650438_196650537_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196695045_196695160_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196720235_196720574_196720669_196721521_196721692_196725972_196726100_196729792_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
WTC11_00054669	chr2	+	3696	26	NNC	ENSG00000144395.18	novel	3597	28	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_3	27.8063014440972	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGGAGATGGTGTTGCA	196638016	True	NA	5	True	AATAAA	-20	NA	196639743	196732793	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_196639779_196646340_196646505_196650438_196650537_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719585_196720173_196720235_196720574_196720669_196721521_196721692_196725972_196726100_196729192_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
WTC11_00054671	chr2	+	1198	7	FSM	ENSG00000115540.15	ENST00000417097.5	1198	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	580.737079542503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTACCGTTCTGCAACA	197504329	True	NA	NA	False	CATAAA	-19	NA	197516073	197551254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197523623_197523687_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
WTC11_00054672	chr2	+	888	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	27	junction_2	35	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAACTGTGATGTTCTC	197577356	True	NA	NA	False	ATTAAA	-18	NA	197578670	197587813	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468_197580643_197587351
WTC11_00054673	chr2	+	767	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	43.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTGGTAGTCTCTTCA	197577356	True	NA	22	True	ATTAAA	-23	NA	197578670	197587689	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468_197580643_197587348
WTC11_00054674	chr2	+	2083	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	46	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTTGGCTGAATCA	197577356	True	NA	NA	False	AATAAA	-23	NA	197578670	197619793	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468_197580643_197618136
WTC11_00054675	chr2	+	2298	4	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_3	39.9694327649962	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTTGGCTGAATCA	197577356	True	NA	NA	False	AATAAA	-23	NA	197578670	197619793	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468_197580643_197614281_197614497_197618136
WTC11_00054676	chr2	+	1179	1	FSM	ENSG00000213938.3	ENST00000443084.1	1179	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	199659550	199660729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199659600_199660700
WTC11_00054677	chr2	+	1495	6	FSM	ENSG00000162972.11	ENST00000295079.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	132.612819893101	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTACTTACAAATTT	199955306	True	NA	0	True	AATAAA	-11	NA	199955316	199964108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199955337_199955496_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
WTC11_00054678	chr2	+	2661	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	-13	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_1	347.525738455282	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200305826	True	NA	15	True	ATTAAA	-16	NA	200305879	200478530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00054679	chr2	+	2032	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_11	274.271356250528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200305718	False	NA	15	True	ATTAAA	-16	NA	200306871	200478530	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200472993_200477635
WTC11_00054680	chr2	+	5793	13	FSM	ENSG00000196141.14	ENST00000619961.4	6115	13	0	322	0	-322	multi-exon	FALSE	canonical	3	26	junction_1	347.334163066827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAAGTGCTGGGATTA	200308836	True	NA	NA	False	NA	NA	NA	200308949	200481934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200309091_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
WTC11_00054681	chr2	+	473	1	FSM	ENSG00000201649.1	ENST00000364779.1	95	1	-401	23	-401	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTAAATTTGACTGCCT	NA	False	NA	NA	False	ACTAAA	-19	NA	200372773	200373246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200372800_200373200
WTC11_00054686	chr2	+	2574	7	NIC	ENSG00000196290.17	novel	1679	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	13	junction_1	173.62283515969	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881417	True	NA	21	True	AATAAA	-15	NA	200889418	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00054687	chr2	+	1876	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10	junction_1	174.715403505879	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881364	True	NA	21	True	AATAAA	-15	NA	200889365	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00054688	chr2	+	1419	6	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	203.423302499984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881449	True	NA	21	True	AATAAA	-15	NA	200889450	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
WTC11_00054689	chr2	+	2721	7	NIC	ENSG00000196290.17	novel	1821	9	NA	NA	7	0	intron_retention	FALSE	canonical	2	2	junction_1	177.630468482559	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881452	True	NA	21	True	AATAAA	-15	NA	200889453	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200890586_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00054690	chr2	+	1450	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	-181	0	-181	0	multi-exon	FALSE	canonical	3	40	junction_3	192.241222166319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200883734	False	NA	21	True	AATAAA	-15	NA	200891735	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
WTC11_00054691	chr2	+	2754	10	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	712	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	24.287374152219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTGACAATTTGATAG	201117700	False	NA	NA	False	NA	NA	NA	201117750	201163157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201162995
WTC11_00054692	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	23.6929952663516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	201118469	True	NA	NA	False	AGTAAA	-6	NA	201118490	201164110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
WTC11_00054693	chr2	+	2425	6	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	406	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	20.1891059732718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201117394	False	NA	17	True	AATAAA	-17	NA	201117444	201141598	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
WTC11_00054694	chr2	+	1634	10	FSM	ENSG00000064012.23	ENST00000432109.6	1629	10	-5	0	-5	0	multi-exon	FALSE	canonical	2	2	junction_2	4.29757324573638	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTATTTTGTTTGTTT	201233164	True	NA	NA	False	AAGAAA	-26	NA	201233457	201286594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201233555_201234015_201234113_201266486_201266792_201271515_201271622_201272637_201272777_201272897_201272943_201274888_201274954_201276826_201276969_201284815_201285318_201286458
WTC11_00054696	chr2	+	1994	12	NIC	ENSG00000082146.13	novel	2222	12	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	88.2425283049669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	201448499	True	NA	12	True	AATAAA	-16	NA	201451761	201480846	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478562_201478602_201479488_201479532_201480031
WTC11_00054697	chr2	+	1268	1	FSM	ENSG00000230799.1	ENST00000448547.1	837	1	-229	-202	-229	202	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAGTATTGTGGGAG	NA	False	NA	NA	False	TATAAA	-40	NA	201762507	201763775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201762500_201763800
WTC11_00054699	chr2	+	6132	2	Genic_Genomic	ENSG00000155760.3_ENSG00000289026.1	novel	4587	1	NA	NA	-8	0	multi-exon	FALSE	canonical	3	14	junction_1	0	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTTATTTAGTTTAC	202030708	True	NA	6	True	AATAAA	-18	NA	202032063	202038441	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_202032358_202032603
WTC11_00054702	chr2	+	589	1	FSM	ENSG00000236047.1	ENST00000435125.1	589	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCCAATAAAGACTGTT	NA	False	NA	NA	False	AATACA	-33	NA	202520400	202520989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202520400_202521000
WTC11_00054703	chr2	+	9163	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	-3447	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.7121740447148	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	NA	False	NA	23	True	AATAAA	-16	NA	202631521	202769757	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_202635348_202635613_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
WTC11_00054706	chr2	+	5895	16	FSM	ENSG00000138380.18	ENST00000402905.7	5938	16	43	0	2	0	multi-exon	FALSE	canonical	2	6	junction_8	2.98142396999972	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGGCCAGAGATTTA	202911840	True	NA	NA	False	AATAAA	-16	NA	202912256	202987063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
WTC11_00054707	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	203013832	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203014983_203016155_203016436_203016598
WTC11_00054708	chr2	+	653	1	FSM	ENSG00000204196.5	ENST00000431098.1	498	1	-89	-66	-89	66	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAGAATATTTAAAATGT	NA	False	NA	42	True	AATAAA	-42	NA	203190690	203191343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203190700_203191300
WTC11_00054709	chr2	+	8258	4	ISM	ENSG00000144426.19	ENST00000434469.1	920	6	657	1184	657	0	internal_fragment	FALSE	canonical	1	2	junction_3	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTTGTAATTCTCAGT	NA	False	NA	NA	False	AATAAA	-23	NA	203209291	203225194	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_203209323_203210957_203211107_203213517_203213654_203217252
WTC11_00054710	chr2	+	1423	13	NNC	ENSG00000119004.17	novel	10552	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	48.8364617882991	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCTATTTGTACTTAA	203237140	True	NA	1	True	TATAAA	-21	NA	203239029	203297011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203239135_203245845_203245896_203246856_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
WTC11_00054711	chr2	+	1453	1	Genic_Genomic	ENSG00000119004.17	novel	NA	NA	NA	NA	65642	103	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCACTGCAACTTCCG	NA	False	NA	118	True	NA	NA	NA	203304676	203306129	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_203304700_203306100
WTC11_00054713	chr2	+	1637	9	NIC	ENSG00000138443.17	novel	2240	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	139.143810498347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	203317229	True	NA	-53	True	ATTAAA	-27	NA	203328391	203427528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395658_203395781_203402575_203402735_203416907_203417082_203427176
WTC11_00054714	chr2	+	1414	10	NNC	ENSG00000138443.17	novel	1567	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_9	132.06713593874	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	203317229	True	NA	-53	True	ATTAAA	-27	NA	203328391	203427528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176_203427270_203427495
WTC11_00054715	chr2	+	7043	18	NIC	ENSG00000118257.17	novel	6644	17	NA	NA	-73	0	combination_of_known_junctions	TRUE	canonical	1	13	junction_1	14.196592992516	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGCATCGTGGTT	NA	False	NA	6	True	AATAAA	-15	NA	205681916	205798131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766804_205792234_205792286_205794753
WTC11_00054716	chr2	+	587	2	FSM	ENSG00000114942.14	ENST00000482103.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	4447	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206162036	False	NA	29	True	AATAAA	-15	NA	206162227	206162928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206162615_206162728
WTC11_00054717	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.463605704947	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	207529719	False	NA	NA	False	ATTAAA	-15	NA	207529736	207597789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
WTC11_00054718	chr2	+	658	6	FSM	ENSG00000118260.15	ENST00000445803.5	651	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	16	junction_1	69.45790091847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAATAGACAATTTCT	207520038	True	NA	NA	False	NA	NA	NA	207529915	207570321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178
WTC11_00054719	chr2	+	5983	10	NIC	ENSG00000118260.15	novel	7650	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	64.0742239347423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	207520085	True	NA	10	True	CATAAA	-18	NA	207529962	207603431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913_207597484_207599079
WTC11_00054720	chr2	+	1099	1	FSM	ENSG00000213082.3	ENST00000426284.1	444	1	-146	-509	-146	509	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATAAATCTTAGTCCT	207681413	False	NA	NA	False	TATAAA	-22	NA	207681443	207682542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207681400_207682500
WTC11_00054721	chr2	+	4537	11	FSM	ENSG00000284079.1_ENSG00000163249.13	ENST00000392209.7	1952	11	-25	-2560	-25	851	multi-exon	FALSE	canonical	2	8	junction_1	48.6691894323298	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTATTTAAAAAAAAAAAAAA	207708225	True	NA	NA	False	NA	NA	NA	207711514	207757025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207711686_207711937_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
WTC11_00054723	chr2	+	1527	9	NIC	ENSG00000163249.13	novel	3813	10	NA	NA	11	84	intron_retention	FALSE	canonical	3	29	junction_5	47.9133332173832	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATATTTGCTTACTGTG	207708369	False	NA	NA	False	NA	NA	NA	207711658	207753959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
WTC11_00054725	chr2	+	2051	10	FSM	ENSG00000115020.17	ENST00000392202.7	2039	10	-12	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.4205393529864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCATTATTTTTAGCT	208263164	True	NA	NA	False	ATTAAA	-24	NA	208266254	208305549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_208266416_208271510_208271692_208273583_208273734_208285725_208285934_208288728_208288819_208298640_208298780_208300936_208301095_208302241_208302354_208304170_208304319_208304845
WTC11_00054726	chr2	+	2564	3	NNC	ENSG00000289113.1	novel	685	2	NA	NA	13	20677	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	2	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGCTTCTAATTTG	209297840	True	NA	4	True	AATATA	-14	NA	209299702	209325573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_209299939_209321641_209321796_209323399
WTC11_00054734	chr2	+	3443	5	NNC	ENSG00000144451.20	novel	2352	18	NA	NA	46797	-22899	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.74456264653803	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTCAGTCACTGTCTTT	NA	False	NA	7	True	AATAAA	-17	NA	213342860	213399623	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_213342889_213350527_213350646_213364075_213364146_213375009_213375120_213396506
WTC11_00054737	chr2	+	931	2	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGCCTCATGCTAGT	NA	False	NA	13	True	AATAAA	-21	NA	215922329	215936385	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_215922904_215936028
WTC11_00054744	chr2	+	3107	18	NIC	ENSG00000138375.13	novel	3201	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	16	junction_1	30.2241911406047	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	216411665	True	NA	4	True	AATAAA	-17	NA	216412496	216483017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_216412604_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
WTC11_00054745	chr2	+	484	6	FSM	ENSG00000138375.13	ENST00000445153.1	484	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.5136019368227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCCCGCAGAGCTCTACA	NA	False	NA	NA	False	NA	NA	NA	216428775	216447061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216446661_216446719_216447017
WTC11_00054746	chr2	+	584	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	-89	0	-59	0	multi-exon	FALSE	canonical	2	6	junction_3	5234.1334420216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	NA	False	NA	13	True	AATATA	-21	NA	216498765	216579180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
WTC11_00054747	chr2	+	2244	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	-19	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	216378180	True	NA	10	True	AATAAA	-16	NA	216498824	216501460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216498878_216499269
WTC11_00054749	chr2	+	559	1	FSM	ENSG00000197756.10	ENST00000624436.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGCTTTGGTGTTTGG	NA	False	NA	28	True	AATAAA	-19	NA	216529024	216529583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216529000_216529600
WTC11_00054750	chr2	+	4423	2	FSM	ENSG00000115457.10	ENST00000490362.1	4414	2	-9	0	0	0	multi-exon	FALSE	canonical	3	10277	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGTGTCTTTTGCCT	216585187	True	NA	13	True	ATTAAA	-13	NA	216633419	216664433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216633966_216660556
WTC11_00054751	chr2	+	751	3	FSM	ENSG00000115457.10	ENST00000436812.1	751	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	5479.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAGATTAAAGGAAGGAA	216660337	True	NA	-11	True	NA	NA	NA	216660732	216664409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216660787_216661771_216661999_216663939
WTC11_00054754	chr2	+	1059	5	FSM	ENSG00000163466.16	ENST00000489598.5	1039	5	-20	0	-14	0	multi-exon	TRUE	canonical	3	2761	junction_1	183.388078947351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTGGAACATAATATTT	218194367	True	NA	NA	False	NA	NA	NA	218217126	218235052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351
WTC11_00054757	chr2	+	2532	7	NIC	ENSG00000144579.8	novel	2525	7	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_2	6.81705377873919	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	218399846	False	NA	13	True	ACTAAA	-19	NA	218399857	218405941	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
WTC11_00054759	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	83.8331676605387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	218657378	True	NA	-20	True	NA	NA	NA	218659759	218663404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
WTC11_00054760	chr2	+	2529	7	NIC	ENSG00000074582.15	novel	1483	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_1	24.5605826930515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	218657355	True	NA	-20	True	NA	NA	NA	218659736	218663404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
WTC11_00054762	chr2	+	4579	2	NIC	ENSG00000163482.12	novel	4721	27	NA	NA	-1001	0	intron_retention	FALSE	canonical	3	161	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	NA	False	NA	11	True	AATAAA	-15	NA	218695527	218702623	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218699349_218701865
WTC11_00054773	chr2	+	398	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	-87	0	-87	0	multi-exon	FALSE	canonical	2	9	junction_2	4	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298746	True	NA	7	True	AATAAA	-19	NA	219298914	219304130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219299129_219300374_219300425_219303996
WTC11_00054774	chr2	+	1008	5	NNC	ENSG00000230432.1	novel	311	3	NA	NA	23	0	intron_retention	FALSE	canonical	2	12	junction_2	4.96865172858795	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298856	True	NA	7	True	AATAAA	-19	NA	219299024	219304130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303676_219303852_219303996
WTC11_00054777	chr2	+	4110	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_4	24.8131013781027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTGTTGTGTTTTT	219440270	True	NA	11	True	AATAAA	-16	NA	219442046	219466861	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219442084_219443107_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
WTC11_00054779	chr2	+	347	1	NIC	ENSG00000072195.15	novel	10782	41	NA	NA	20754	-831	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCCTACCCTGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	219492415	219492762	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219492400_219492800
WTC11_00054783	chr2	+	2923	10	FSM	ENSG00000144591.20	ENST00000684334.1	2900	10	-23	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	76.3308264184818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGAACCTTGGAGCCA	219494691	True	NA	-3	True	AATAAA	-1	NA	219498864	219506973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219505363_219505457_219506073_219506253_219506423_219506697
WTC11_00054789	chr2	+	573	1	FSM	ENSG00000233868.1	ENST00000417147.1	390	1	25	-208	25	208	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCACTGTAAATAG	NA	False	NA	NA	False	AATAAA	-27	NA	221944247	221944820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_221944200_221944800
WTC11_00054798	chr2	+	1922	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	-1	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	221.343871329206	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315499	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
WTC11_00054799	chr2	+	3539	6	FSM	ENSG00000168958.20	ENST00000460756.5	3524	6	-15	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	74.0497130311793	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315499	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
WTC11_00054807	chr2	+	2268	20	NIC	ENSG00000135931.19	novel	2333	21	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	70.2501663526584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	231194890	True	NA	14	True	AATAAA	-17	NA	231198722	231345199	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00054808	chr2	+	2192	12	NIC	ENSG00000135931.19	novel	2128	12	NA	NA	15	141	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	94.4205468604238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGCAGTTGTCTTTA	231194935	True	NA	6	True	AATAAA	-19	NA	231198767	231260145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
WTC11_00054813	chr2	+	3226	5	FSM	ENSG00000204120.16	ENST00000475359.6	3211	5	-15	0	6	0	multi-exon	TRUE	canonical	0	0	junction_2	45.9945648963005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTGGAAAGTAAAGTT	232690725	True	NA	NA	False	AATAAA	-22	NA	232697315	232738681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735752
WTC11_00054826	chr2	+	9930	16	FSM	ENSG00000157985.19	ENST00000614409.4	9932	16	2	0	1	0	multi-exon	FALSE	canonical	3	29	junction_10	10.8053484698808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGAGTTGTTGTTTTT	NA	False	NA	20	True	AATAAA	-26	NA	235709178	236131800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
WTC11_00054827	chr2	+	945	2	FSM	ENSG00000233611.4	ENST00000686834.1	961	2	16	0	-7	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	236166509	True	NA	9	True	AATAAA	-21	NA	236167457	236221639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_236167670_236220906
WTC11_00054829	chr2	+	1995	12	FSM	ENSG00000115648.14	ENST00000468178.5	1979	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	6	junction_11	7.11418092600504	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGGATGCCCAGTT	237486718	True	NA	NA	False	AATGAA	-39	NA	237487234	237545769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237545456
WTC11_00054833	chr2	+	1330	2	NIC	ENSG00000234949.2	novel	1301	3	NA	NA	74	263	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGAGCGAGATCT	237591091	True	NA	NA	False	NA	NA	NA	237591242	237596244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237591268_237594939
WTC11_00054834	chr2	+	2277	12	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	127.001138798825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237688777	True	NA	21	True	ATTAAA	-23	NA	237692146	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00054835	chr2	+	2322	13	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_4	157.148284538309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGCAATGTGGTTCTA	237688798	True	NA	15	True	ATTAAA	-17	NA	237692167	237780309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00054851	chr2	+	4523	26	ISM	ENSG00000006607.14	ENST00000264042.8	4009	27	0	49	0	-48	intron_retention	FALSE	canonical	2	12	junction_21	19.4147984795104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTCACACACATTTG	241353172	True	NA	-39	True	NA	NA	NA	241356284	241494792	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241468139_241468378_241475856_241475988_241483464_241483534_241484241_241484332_241489961_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292
WTC11_00054852	chr2	+	4013	27	FSM	ENSG00000006607.14	ENST00000264042.8	4009	27	-4	0	-4	0	multi-exon	TRUE	canonical	2	12	junction_21	19.2799371454204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATTCTCCTCTGCCTG	241353168	True	NA	10	True	AATAAA	-18	NA	241356280	241494841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241468139_241468378_241475856_241475988_241483464_241483534_241484241_241484332_241489961_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
WTC11_00054859	chr2	+	1595	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	205.092647559195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	241626276	True	NA	-24	True	NA	NA	NA	241637692	241672592	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
WTC11_00054861	chr2	+	2998	16	NNC	ENSG00000168397.17	novel	2797	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	288.680646312765	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACCTTGTGTCTAT	241626276	True	NA	84	True	NA	NA	NA	241637692	241673849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241637725_241651009_241651112_241651263_241651336_241651866_241651975_241652276_241652315_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
WTC11_00054868	chr2	-	3044	2	FSM	ENSG00000184731.6	ENST00000461026.1	471	2	-13	-2560	-13	153	multi-exon	FALSE	canonical	3	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGTTGCATGGCACC	-46704	True	NA	NA	False	NA	NA	NA	46883	38660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41628_46806
WTC11_00054869	chr2	-	3149	2	FSM	ENSG00000184731.6	ENST00000460464.1	552	2	-191	-2406	-191	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-42964	False	NA	-4	True	AATAAA	-21	NA	43143	38813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41628_42808
WTC11_00054870	chr2	-	1663	9	NNC	ENSG00000035115.22	novel	1744	10	NA	NA	0	86808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.2314832613614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAGAGGAGACTCAGAA	NA	False	NA	NA	False	NA	NA	NA	253113	130921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130949_218143_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004
WTC11_00054871	chr2	-	1707	10	NNC	ENSG00000035115.22	novel	1744	10	NA	NA	7	86808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.5459597275864	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAGAGGAGACTCAGAA	-264006	False	1235	NA	False	NA	NA	NA	264025	130921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130949_218143_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
WTC11_00054872	chr2	-	1688	9	ISM	ENSG00000035115.22	ENST00000356150.10	1744	10	10919	5	0	0	3prime_fragment	FALSE	canonical	3	25	junction_1	71.8965185179366	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	NA	False	NA	-13	True	AATAAA	-20	NA	253113	218148	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004
WTC11_00054873	chr2	-	1930	9	NIC	ENSG00000035115.22	novel	1999	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	54.7060325741138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	-264361	False	NA	-13	True	AATAAA	-20	NA	264380	218148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
WTC11_00054874	chr2	-	502	1	FSM	ENSG00000035115.22	ENST00000602998.1	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGCTGTGATGCCACTT	-256358	False	NA	NA	False	ATTAAA	-23	NA	256377	255875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_255900_256400
WTC11_00054875	chr2	-	1122	5	FSM	ENSG00000189292.16	ENST00000401489.6	526	5	-228	-368	-78	-3	multi-exon	FALSE	canonical	3	12	junction_1	12.8062484748657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAGTCTTCAAAGTGAC	-287626	True	NA	-2	True	AATAAA	-31	NA	287915	279560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582
WTC11_00054876	chr2	-	1140	6	FSM	ENSG00000189292.16	ENST00000403610.9	1184	6	41	3	41	-3	multi-exon	FALSE	canonical	2	3	junction_5	14.8458748479165	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAGTCTTCAAAGTGAC	-288031	False	NA	-2	True	AATAAA	-31	NA	288050	279560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582_287893_288012
WTC11_00054877	chr2	-	1641	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGCTACAATTCAAGA	-1624464	True	NA	NA	False	NA	NA	NA	1625419	1620509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1621980_1625248
WTC11_00054878	chr2	-	6776	22	NIC	ENSG00000130508.11	novel	6817	23	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_19	84.1166450669798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-1727525	True	NA	-1	True	AATAAA	-22	NA	1744546	1631886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
WTC11_00054882	chr2	-	1792	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_7	75.680615454392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCCTGGGTCTTTGTC	-3375894	True	NA	-6	True	NA	NA	NA	3377830	3188927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
WTC11_00054884	chr2	-	1532	2	FSM	ENSG00000287126.1	ENST00000671571.1	1213	2	644	-963	644	25	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATTCTTTTCTTTA	-3574175	False	NA	NA	False	AATAAA	-41	NA	3574186	3568479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3569960_3574134
WTC11_00054885	chr2	-	7203	29	NIC	ENSG00000134313.17	novel	7254	30	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	23.8542288639536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTCATGAATTTTTAT	-8834416	True	NA	-4	True	AATAAA	-15	NA	8837592	8728927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812497_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
WTC11_00054887	chr2	-	523	2	NNC	ENSG00000143797.12	novel	7622	13	NA	NA	-130	-94165	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCGAAGGAGTGTTAAACA	-9003821	False	NA	-15	True	AATAAA	-14	NA	9003839	9002318	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9002542_9003539
WTC11_00054888	chr2	-	2262	8	NNC	ENSG00000119185.13	novel	4859	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	145.008092666497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9423134	False	309	-18	True	AATAAA	-2	NA	9423176	9405683	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406271_9406494_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
WTC11_00054889	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	121.826464694663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	-9420388	True	NA	NA	False	NA	NA	NA	9423462	9406348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
WTC11_00054892	chr2	-	1785	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2189	-8	multi-exon	FALSE	canonical	3	9	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCAGTTTGGGGTCTG	-10042825	False	NA	-7	True	AATACA	-16	NA	10042852	10039099	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_10040665_10042632
WTC11_00054894	chr2	-	2352	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	-261	30192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.05081826538	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCTCAGGAAGAGGCT	-10448573	False	NA	NA	False	AAAAAG	-2	NA	10448588	10409775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10409808_10440384_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
WTC11_00054895	chr2	-	2351	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	-261	30192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.05081826538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCTCAGGAAGAGGCT	-10448573	False	NA	NA	False	AAAAAG	-2	NA	10448588	10409775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10409807_10440384_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
WTC11_00054896	chr2	-	1063	2	NIC	ENSG00000272275.1	novel	393	3	NA	NA	3	85	intron_retention	FALSE	canonical	3	43	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTAAATTAAATGATTAT	NA	False	NA	81	True	AATAAA	-20	NA	10770055	10767789	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_10768794_10769996
WTC11_00054897	chr2	-	308	4	FSM	ENSG00000134318.15	ENST00000493096.1	461	4	153	0	59	0	multi-exon	FALSE	canonical	3	129	junction_1	16.5730705262081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTCCAGTGGAGCCA	-11195040	False	NA	NA	False	AATGAA	-20	NA	11195057	11192675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11192713_11193778_11193858_11194255_11194345_11194954
WTC11_00054900	chr2	-	5055	26	NIC	ENSG00000163029.16	novel	5173	27	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_20	60.5871801621432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747559	True	NA	1	True	AATAAA	-19	NA	17753793	17663811	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
WTC11_00054903	chr2	-	5904	19	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	21	-16	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	168.929965764909	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCTGTACCTCAGTTA	-20347705	True	NA	20	True	AATAAA	-31	NA	20350813	20248706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20312235_20312424_20318536_20318646_20327309_20327379_20350596
WTC11_00054904	chr2	-	6324	21	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_10	155.736917588605	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCTGTACCTCAGTTA	-20347724	True	NA	20	True	AATAAA	-31	NA	20350832	20248706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
WTC11_00054905	chr2	-	6399	22	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_20	159.902393697543	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20347704	True	NA	-10	True	AATAAA	-1	NA	20350812	20248736	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20326260_20326386_20327309_20327379_20350596
WTC11_00054909	chr2	-	399	1	FSM	ENSG00000233416.1	ENST00000421295.1	375	1	12	-36	12	36	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTATTAAATCAAAGAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	20606642	20606243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20606200_20606600
WTC11_00054910	chr2	-	1941	8	NNC	ENSG00000118961.15	novel	2045	9	NA	NA	25	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	45.9249609778422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGCATCCGTGTCTCA	-20820455	True	NA	-9	True	TTTAAA	-15	NA	20823064	20684022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20684924_20685546_20685658_20686837_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
WTC11_00054911	chr2	-	3690	6	FSM	ENSG00000118961.15	ENST00000440866.6	3728	6	29	9	0	5	multi-exon	FALSE	canonical	3	21	junction_2	32.1185304769692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGCATCCGTGTCTCA	-20820492	True	NA	-9	True	TTTAAA	-15	NA	20823101	20684022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20801309_20801466_20823036
WTC11_00054912	chr2	-	8087	28	NIC	ENSG00000119778.15	novel	8112	28	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	14.5271138577846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCTTAATT	-23926342	True	NA	NA	False	AATAAA	-17	NA	23927113	23748663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786041_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
WTC11_00054913	chr2	-	747	4	FSM	ENSG00000115129.14	ENST00000407482.5	747	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	95.8204339144608	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGGAGGCCAACAAGA	-24084316	False	NA	NA	False	NA	NA	NA	24084326	24077633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24077762_24080818_24081032_24082884_24083153_24084188
WTC11_00054914	chr2	-	785	4	ISM	ENSG00000115129.14	ENST00000335934.8	1635	6	394	3316	13	-3	5prime_fragment	FALSE	canonical	3	78	junction_3	62.4179461373089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCAGTGCTGTGTATCA	-24082958	True	NA	-3	True	AATAAA	-19	NA	24084821	24080748	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_24081032_24082884_24083153_24084188_24084332_24084730
WTC11_00054915	chr2	-	644	3	ISM	ENSG00000115129.14	ENST00000417886.1	827	4	114	1247	-71	-3	5prime_fragment	FALSE	canonical	3	29	junction_1	93.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCAGTGCTGTGTATCA	-24084387	False	1863	-3	True	AATAAA	-19	NA	24084397	24080748	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_24081032_24083000_24083153_24084188
WTC11_00054917	chr2	-	3980	4	ISM	ENSG00000138031.15	ENST00000606682.5	3136	19	10390	4875	939	3516	intron_retention	FALSE	canonical	3	99	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGCTGTTAGAGGAACTA	-24831230	False	NA	NA	False	NA	NA	NA	24831246	24824046	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_24824537_24826044_24826127_24827545_24827609_24827901
WTC11_00054918	chr2	-	4828	7	NIC	ENSG00000115137.12	novel	1378	9	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	4.94694069321861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGGTCTGTGGGCTGCA	-24971840	True	NA	-5	True	AGTAAA	-13	NA	24972043	24943642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_24947749_24957042_24957166_24957809_24957975_24958546_24958602_24963404_24963475_24967210_24967294_24971817
WTC11_00054919	chr2	-	2142	19	NNC	ENSG00000138101.20	novel	2417	21	NA	NA	0	5511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.4376964362303	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCGACTCAGCACAC	NA	False	NA	NA	False	NA	NA	NA	25652660	25371686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25371716_25377242_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593
WTC11_00054920	chr2	-	2222	18	NIC	ENSG00000138101.20	novel	2420	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	63.2289189672861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668249	True	NA	-22	True	AAAAAG	-7	NA	25673547	25377242	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
WTC11_00054922	chr2	-	1384	8	NNC	ENSG00000138101.20	novel	826	6	NA	NA	0	18616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.5979260451667	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTTCTTCTGTCAAT	NA	False	NA	NA	False	NA	NA	NA	25652660	25557899	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25558408_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593
WTC11_00054925	chr2	-	2748	21	FSM	ENSG00000084754.12	ENST00000643063.1	2748	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	311.886273343345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGCACCCAGCCAAAC	-26231919	True	NA	-61	True	NA	NA	NA	26244604	26190921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26210694_26210815_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
WTC11_00054926	chr2	-	200	1	FSM	ENSG00000272056.1	ENST00000607407.1	659	1	421	38	421	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATCAAGGAAAAAAAAAC	NA	False	NA	NA	False	AAAAAG	-38	NA	27053855	27053655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27053700_27053900
WTC11_00054929	chr2	-	1686	2	FSM	ENSG00000163794.6	ENST00000296099.2	795	2	-931	40	-931	-40	multi-exon	FALSE	canonical	2	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCGTGACTATTTTTT	-27309358	False	NA	NA	False	NA	NA	NA	27309376	27307439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27307909_27308159
WTC11_00054931	chr2	-	872	7	NIC	ENSG00000115204.15	novel	1002	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_5	201.274618922064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317905	True	NA	-5	True	ATTAAA	-15	NA	27323083	27309491	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27322447_27322523_27323051
WTC11_00054933	chr2	-	592	3	FSM	ENSG00000115207.14	ENST00000431028.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	235.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATCTGCATGAAGGCTC	-27328077	False	NA	24	True	NA	NA	NA	27328089	27326292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326724_27327176_27327285_27328036
WTC11_00054934	chr2	-	1821	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-142	18022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.379779385453	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGAATGGGCACGGTG	-27370462	False	NA	NA	False	AAAAAG	-1	NA	27370480	27346329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27346368_27364351_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
WTC11_00054935	chr2	-	2253	11	NNC	ENSG00000115241.11	novel	2210	10	NA	NA	0	34865	intron_retention	FALSE	non_canonical	0	0	junction_1	274.278489860215	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGAATGGGCACGGTG	-27392543	True	NA	NA	False	AAAAAG	-1	NA	27409591	27346329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27346368_27381193_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
WTC11_00054938	chr2	-	582	1	FSM	ENSG00000213453.3	ENST00000394290.3	584	1	341	-339	341	339	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACCTGTAATCCCGGC	NA	False	NA	NA	False	TATAAA	-20	NA	27393026	27392444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27392400_27393000
WTC11_00054939	chr2	-	5178	32	ISM	ENSG00000138002.16	ENST00000260570.8	5395	48	22296	0	-1366	0	3prime_fragment	FALSE	canonical	3	26	junction_30	14.7160427653706	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACCACTGTATTCTTT	NA	False	NA	-13	True	ATTAAA	-14	NA	27467447	27444376	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745
WTC11_00054940	chr2	-	569	7	FSM	ENSG00000138002.16	ENST00000420854.1	569	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	28.6337019766723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAAGAGGTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	27447922	27445443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27445450_27445552_27445630_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811
WTC11_00054942	chr2	-	1629	6	NNC	ENSG00000119760.16	novel	4296	6	NA	NA	227	36	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	67.0384964031861	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCATTACTAATACCTAA	-27663368	False	2864	32	True	NA	NA	NA	27663387	27653015	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661156_27662178_27662282_27663328
WTC11_00054943	chr2	-	2873	2	FSM	ENSG00000205334.3	ENST00000379677.2	2860	2	0	-13	0	13	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTCTAAGTTAAGTAAC	-27715706	True	NA	NA	False	AATAAA	-31	NA	27715732	27705772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27708497_27715583
WTC11_00054944	chr2	-	1679	8	NIC	ENSG00000162959.14	novel	4505	9	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	84.4731571904015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGCTCTGTGGTATAT	-32010544	False	NA	NA	False	AATAAA	-33	NA	32010557	31867808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
WTC11_00054947	chr2	-	1251	6	NIC	ENSG00000162961.14	novel	601	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	672.271968774543	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTACAGGCGTGAGCC	-32019686	True	NA	NA	False	NA	NA	NA	32039805	32021019	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_32021100_32023421_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00054948	chr2	-	2828	7	FSM	ENSG00000119812.20	ENST00000403368.1	2818	7	0	-10	0	0	multi-exon	FALSE	canonical	3	684	junction_2	67.6428529525149	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-33589405	True	NA	-17	True	AATAAA	-18	NA	33599291	33583659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
WTC11_00054950	chr2	-	705	2	Genic_Genomic	ENSG00000260025.1	novel	366	1	NA	NA	-445	0	multi-exon	FALSE	canonical	3	38	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	NA	False	NA	-4	True	AATAAA	-15	NA	36355559	36354748	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_36354982_36355087
WTC11_00054951	chr2	-	2101	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	17	-21	-6	21	multi-exon	FALSE	canonical	2	5	junction_4	15.3617829368859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGTTTTGTGTTGTA	-36595451	True	NA	1	True	AATAAA	-40	NA	36598174	36552236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
WTC11_00054956	chr2	-	5815	12	NIC	ENSG00000119787.14	novel	3805	13	NA	NA	8	5	intron_retention	FALSE	canonical	3	275	junction_4	30.051746006123	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGACCATTGGCTTTCTT	-38372862	True	NA	NA	False	ATTAAA	-29	NA	38377248	38293948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
WTC11_00054958	chr2	-	603	6	FSM	ENSG00000115875.19	ENST00000432873.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1013.41415028605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	-38748576	False	112	30	True	AATAAA	-16	NA	38748616	38744892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38747061_38747131_38748046_38748158_38748578
WTC11_00054961	chr2	-	2501	1	Genic_Genomic	ENSG00000115904.15_ENSG00000229692.3	novel	NA	NA	NA	NA	-901	21	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAACCTATCAGTTGCTT	NA	False	NA	NA	False	AATAAA	-41	NA	38994758	38992257	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_38992300_38994800
WTC11_00054965	chr2	-	1561	10	FSM	ENSG00000138050.15	ENST00000530522.1	1561	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	92.968333915969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGATGGGTACAC	-39774882	True	NA	NA	False	NA	NA	NA	39779221	39736609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769757_39770120_39771514_39771641_39779113
WTC11_00054966	chr2	-	2510	7	FSM	ENSG00000183023.18	ENST00000406391.2	2814	7	304	0	295	0	multi-exon	FALSE	canonical	0	0	junction_6	3.18416219575713	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACTATCAGATATAGTA	NA	False	NA	NA	False	CATAAA	-11	NA	40429976	40115252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_40115630_40139400_40139677_40160764_40160865_40164853_40164985_40174824_40174843_40177751_40177856_40428472
WTC11_00054967	chr2	-	393	1	FSM	ENSG00000236533.1	ENST00000414823.1	399	1	17	-11	17	11	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACTCACACACACACAC	NA	False	NA	NA	False	AATAAA	-3	NA	41850584	41850191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41850200_41850600
WTC11_00054968	chr2	-	4293	2	FSM	ENSG00000171126.8	ENST00000306078.2	3709	2	-579	-5	-579	5	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTACTGGGACCGCTTTA	-42494549	False	NA	-5	True	AATAAA	-23	NA	42494561	42442011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42444580_42492836
WTC11_00054970	chr2	-	631	6	FSM	ENSG00000162882.15	ENST00000404451.7	651	6	0	20	0	-20	multi-exon	FALSE	canonical	2	5	junction_1	6.14491659829489	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCAGGAGGGCTCCTC	-42792521	False	NA	NA	False	NA	NA	NA	42792531	42767686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42767929_42770142_42770187_42783313_42783421_42783783_42783868_42788528_42788608_42792456
WTC11_00054971	chr2	-	6121	39	NIC	ENSG00000115970.19	novel	6091	38	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_38	19.7888612727189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCCTCCCCTACTT	-43593399	True	NA	-16	True	CATAAA	-17	NA	43596023	43230852	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43592843_43592891_43595930
WTC11_00054973	chr2	-	1274	1	FSM	ENSG00000223658.8	ENST00000475092.4	1279	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGCTTTTTAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	43676424	43675150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43675200_43676400
WTC11_00054975	chr2	-	1875	14	FSM	ENSG00000138095.20	ENST00000409946.6	1875	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	471.424744726906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAGAATACTATTTTG	-43964210	True	NA	NA	False	AATAAA	-13	NA	43996005	43958985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43959221_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00054976	chr2	-	2877	2	FSM	ENSG00000259439.3	ENST00000437916.2	2880	2	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGTGCGTGTTTAC	-44939186	False	51	-1	True	NA	NA	NA	44939199	44921079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44923580_44938822
WTC11_00054977	chr2	-	2081	2	FSM	ENSG00000259439.3	ENST00000430847.3	761	2	172	-1492	47	1492	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAACTGTGTTTATTCTC	-44935584	False	NA	-4	True	AATAAA	-15	NA	44935597	44928484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44930248_44935279
WTC11_00054978	chr2	-	278	2	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	57	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCAGATGGCCTGAAGT	NA	False	NA	NA	False	NA	NA	NA	45039823	45034833	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_45034899_45039610
WTC11_00054979	chr2	-	1662	2	FSM	ENSG00000250565.7	ENST00000306448.4	1979	2	314	3	314	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAAATTCCAATTCAT	NA	False	NA	-13	True	AATAAA	-18	NA	46519643	46511849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46512813_46518944
WTC11_00054980	chr2	-	586	4	FSM	ENSG00000151665.13	ENST00000420164.5	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	198.378426246404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46607835	False	NA	NA	False	AATAAA	-15	NA	46612274	46581284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46581592_46591802_46591926_46592474_46592584_46612227
WTC11_00054981	chr2	-	1244	7	NNC	ENSG00000143933.20	novel	770	7	NA	NA	0	32831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3559.915748847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGCTTGAAGACAAGC	-47099978	True	NA	NA	False	NA	NA	NA	47176511	47127252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_47127288_47160084_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
WTC11_00054983	chr2	-	1928	2	FSM	ENSG00000184261.5	ENST00000493527.1	833	2	-655	-440	15	440	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCCAATGTGTGAATTG	-47569891	True	NA	-2	True	AATAAA	-27	NA	47570970	47542903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47543802_47569940
WTC11_00054984	chr2	-	3388	18	ISM	ENSG00000138081.22	ENST00000403359.8	4760	23	2	5929	2	0	5prime_fragment	FALSE	canonical	3	124	junction_17	23.6293466003875	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-47903423	True	NA	-8	True	AGTAAA	-19	NA	47906496	47812848	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
WTC11_00054985	chr2	-	8831	18	NIC	ENSG00000179915.25	novel	5724	21	NA	NA	0	-104	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	4.07201607055924	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACAATATTAAAATACT	-51031235	True	NA	NA	False	CATAAA	-18	NA	51032151	49918608	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_49922252_49943712_49943792_50053270_50053591_50054954_50055045_50091322_50091495_50236788_50236971_50465441_50465562_50472297_50472472_50495904_50496096_50497332_50497715_50506494_50506618_50531226_50531431_50538252_50538637_50552586_50553026_50620021_50620184_50623313_50623616_51027501_51029195_51031980
WTC11_00054987	chr2	-	1491	1	FSM	ENSG00000238165.1	ENST00000426912.1	237	1	-352	-902	-352	902	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGCGTCTCTGCCCAG	NA	False	NA	NA	False	NA	NA	NA	50830030	50828539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50828500_50830000
WTC11_00054988	chr2	-	455	4	FSM	ENSG00000228033.6	ENST00000443237.1	453	4	-7	5	-7	-5	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAACAAAAGCTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	52910027	52722681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_52722864_52726671_52726819_52897242_52897305_52909963
WTC11_00054989	chr2	-	1433	2	FSM	ENSG00000119737.6	ENST00000394705.3	2094	2	0	661	0	-661	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTGCTGCA	-53859749	True	NA	NA	False	AATACA	-5	NA	53859967	53853572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53854866_53859827
WTC11_00054990	chr2	-	2390	8	FSM	ENSG00000115310.19	ENST00000357732.8	2390	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	492.078308020674	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038630	True	NA	-4	True	AATAAA	-17	NA	55050544	54972188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55028163_55028221_55049744
WTC11_00054996	chr2	-	5653	17	NNC	ENSG00000275052.5	novel	5506	17	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	1	53	junction_3	94.6142662340093	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55617636	False	NA	-1	True	AATAAA	-18	NA	55617790	55547291	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55550007_55558774_55558969_55564312_55564477_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
WTC11_00054999	chr2	-	5473	2	ISM	ENSG00000119866.22	ENST00000335712.11	5519	3	7446	-485	-11	0	3prime_fragment	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAAGCTTCTTGTGTC	-60546202	False	NA	-6	True	AATAAA	-16	NA	60546212	60457193	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_60462425_60545970
WTC11_00055001	chr2	-	1175	2	ISM	ENSG00000162927.14	ENST00000398658.2	1227	3	5295	0	5295	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61011865	False	NA	0	True	AATAAA	-16	NA	61011898	61009847	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_61010889_61011764
WTC11_00055002	chr2	-	2546	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	-14	0	14	multi-exon	FALSE	canonical	3	64	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACTTCAAAGGGTACT	-61144147	True	NA	-5	True	AATAAA	-31	NA	61144950	61141577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61143946_61144772
WTC11_00055007	chr2	-	8029	16	FSM	ENSG00000082898.19	ENST00000678113.1	8930	16	0	901	0	756	multi-exon	FALSE	canonical	2	723	junction_15	184.995207145122	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCTATACATTTTATATA	-61500074	False	NA	NA	False	NA	NA	NA	61500128	61476932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61495614_61496878_61498914_61499712
WTC11_00055008	chr2	-	4659	24	FSM	ENSG00000082898.19	ENST00000677933.1	4696	24	37	0	37	0	multi-exon	FALSE	canonical	2	723	junction_18	186.062706668624	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61533734	False	NA	38	True	NA	NA	NA	61534209	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771
WTC11_00055010	chr2	-	5834	23	FSM	ENSG00000082898.19	ENST00000677290.1	5834	23	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_16	178.555614411915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTATTTTTCCTTTAT	-61537305	False	NA	-18	True	AATAAA	-8	NA	61537780	61477941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
WTC11_00055012	chr2	-	568	2	FSM	ENSG00000082898.19	ENST00000495003.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGCATAAATTCTGAAT	-61533493	False	NA	NA	False	NA	NA	NA	61533968	61526150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61526522_61533771
WTC11_00055013	chr2	-	303	2	FSM	ENSG00000170264.13	ENST00000496369.1	699	2	0	396	0	146	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTGAGATACATTATT	NA	False	NA	NA	False	NA	NA	NA	61839524	61835910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61836110_61839420
WTC11_00055015	chr2	-	3483	8	NNC	ENSG00000197329.12	novel	3716	7	NA	NA	0	3711	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.2662518177139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCCTAATAATCGCC	-64137627	True	NA	NA	False	AAAAAG	-4	NA	64144362	64088940	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_64088973_64092858_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
WTC11_00055016	chr2	-	810	1	FSM	ENSG00000270354.1	ENST00000604190.1	219	1	0	-591	0	591	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTAGTAGTGCAAGATT	NA	False	NA	-6	True	AATAAA	-23	NA	64208716	64207906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64207900_64208700
WTC11_00055017	chr2	-	4286	2	Genic_Genomic	ENSG00000270354.1	novel	219	1	NA	NA	-48896	-80	multi-exon	FALSE	canonical	3	29	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGTTCCAGGACCAAA	NA	False	NA	NA	False	NA	NA	NA	64257612	64208577	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_64210167_64254915
WTC11_00055018	chr2	-	1587	4	NIC	ENSG00000237638.3	novel	1409	5	NA	NA	5	195	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	11.7851130197758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGTCTGATGTGTTA	-65055278	True	NA	NA	False	AATAAA	-23	NA	65056163	64953057	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_64954045_64955892_64955985_65047953_65048213_65055914
WTC11_00055020	chr2	-	975	7	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	72748	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.25991127935317	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAGCGGAAGGGAAGG	-67325110	False	77	-88	True	NA	NA	NA	67325232	67175236	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084
WTC11_00055022	chr2	-	531	4	FSM	ENSG00000243667.7	ENST00000457114.5	523	4	0	-8	0	8	multi-exon	FALSE	canonical	2	4	junction_1	60.3894766402963	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGAATCCTAGATCAA	-68138773	False	NA	NA	False	AATAAA	-32	NA	68138785	68131751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68132006_68134701_68134800_68137298_68137434_68138741
WTC11_00055023	chr2	-	1818	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	1	77	1	-21	multi-exon	FALSE	canonical	2	9	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTTGAACTTTGTAAAA	NA	False	NA	-78	True	NA	NA	NA	68319948	68293086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68294027_68317156_68317308_68319221
WTC11_00055028	chr2	-	3167	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	-1628	4	-1628	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATGTAATGTGTTGA	NA	False	NA	1	True	AATAAA	-15	NA	69963259	69960092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69960100_69963300
WTC11_00055030	chr2	-	546	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	10.7092249953019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACCCTGAACATTTCAT	-70087198	True	NA	NA	False	NA	NA	NA	70087343	70031752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
WTC11_00055031	chr2	-	355	2	ISM	ENSG00000179818.16	ENST00000442326.1	668	5	177	1019	-134	-1019	internal_fragment	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGATGCCCACACAGAAT	NA	False	NA	NA	False	AAGAAA	-18	NA	70103043	70094957	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_70095060_70102790
WTC11_00055032	chr2	-	5956	11	NIC	ENSG00000116001.17	novel	4634	13	NA	NA	-3210	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_8	140.326904049081	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70232503	False	NA	1	True	AATAAA	-25	NA	70232528	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227792_70229058_70229092_70229263_70229319_70230755
WTC11_00055033	chr2	-	4925	13	NIC	ENSG00000116001.17	novel	4634	13	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_5	114.041019666902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	NA	False	NA	1	True	AATAAA	-25	NA	70248786	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216752_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00055034	chr2	-	3794	7	NIC	ENSG00000116001.17	novel	4633	12	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_5	143.930538802577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70224982	False	NA	-22	True	ATTAAA	-22	NA	70225012	70210203	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216752_70216995_70224553
WTC11_00055035	chr2	-	3647	12	ISM	ENSG00000116001.17	ENST00000282574.8	3823	13	12405	0	0	0	3prime_fragment	FALSE	canonical	3	81	junction_2	125.727174127352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	NA	False	NA	-22	True	ATTAAA	-22	NA	70236175	70210203	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078
WTC11_00055036	chr2	-	3881	14	NNC	ENSG00000116001.17	novel	3823	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	182.488128818735	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70238439	True	NA	-22	True	ATTAAA	-22	NA	70248577	70210203	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70225327_70225394_70227734_70227823_70229058_70229092_70229263_70229319_70230760_70230855_70236078_70236176_70248404
WTC11_00055037	chr2	-	4179	15	NIC	ENSG00000116001.17	novel	3823	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	202.369597720687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70238480	True	NA	-22	True	ATTAAA	-22	NA	70248618	70210203	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216752_70216995_70224553_70224630_70225327_70225394_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00055039	chr2	-	319	1	FSM	ENSG00000231414.1	ENST00000446011.1	156	1	8	-171	8	171	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATTTAAAAAAAAAAAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	70254002	70253683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70253700_70254000
WTC11_00055040	chr2	-	1093	4	FSM	ENSG00000143977.14	ENST00000482975.6	1093	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3660.43169888774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTCAGATGTTCTGA	-70293428	False	NA	-74	True	AATAAA	-20	NA	70293438	70281503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70292674
WTC11_00055042	chr2	-	4210	6	FSM	ENSG00000163235.16	ENST00000295400.11	4117	6	-95	2	52	-2	multi-exon	FALSE	canonical	2	8	junction_1	2.24499443206436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGACTGGAGTGTTTC	-70553904	False	NA	-4	True	AATGAA	-14	NA	70553921	70447285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465737_70514858_70514913_70553727
WTC11_00055044	chr2	-	560	4	FSM	ENSG00000163235.16	ENST00000394241.3	568	4	8	0	8	0	multi-exon	FALSE	canonical	2	5	junction_2	3.68178700572909	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTTGCTGCCCCTA	-70553928	True	NA	NA	False	NA	NA	NA	70553965	70456338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70456489_70465615_70465734_70514858_70514913_70553727
WTC11_00055045	chr2	-	582	4	FSM	ENSG00000075340.23	ENST00000473232.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	101.588494536646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAGCGAAGAGACGG	-70759831	True	NA	NA	False	NA	NA	NA	70768200	70706412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70706443_70711132_70711251_70713065_70713185_70767885
WTC11_00055046	chr2	-	7208	5	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	0	99389	at_least_one_novel_splicesite	TRUE	canonical	3	117	junction_1	25.8396497654283	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCTAATCATTACTTG	-71220458	True	NA	NA	False	TATAAA	-16	NA	71227103	71083348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_71083612_71182092_71188536_71189844_71190022_71202451_71202601_71226927
WTC11_00055048	chr2	-	4627	13	NIC	ENSG00000144040.13	novel	4072	14	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	55.0006944400604	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTGTGGTTTTGTGAAT	-73071283	False	2264	-1	True	AATAAA	-18	NA	73071296	72942034	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_72945100_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73070459
WTC11_00055049	chr2	-	1805	5	FSM	ENSG00000144040.13	ENST00000479293.5	1808	5	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_4	79.1118669985736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCAAAAAAAAAAAAAAAGA	-73071276	False	2264	NA	False	NA	NA	NA	73071289	73019449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73070459
WTC11_00055050	chr2	-	5969	6	NNC	ENSG00000135631.17	novel	6285	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	15.4194682139171	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTGTTGTGTTCCTGT	-73111886	True	NA	-2	True	AATAAA	-19	NA	73112948	73073379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_73075725_73075992_73076183_73079650_73081346_73088049_73088750_73088878_73089316_73112346
WTC11_00055052	chr2	-	574	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	1	0	-1	multi-exon	FALSE	canonical	3	3	junction_1	373.007037467123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTTGGTGATTTT	-73730665	True	NA	NA	False	TTTAAA	-1	NA	73737375	73729169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
WTC11_00055053	chr2	-	644	5	NIC	ENSG00000144034.16	novel	816	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_4	279.250223813697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730635	True	NA	NA	False	ATTAAA	-17	NA	73737345	73729889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734589_73737301
WTC11_00055055	chr2	-	4145	27	FSM	ENSG00000204843.13	ENST00000633691.1	4160	27	17	-2	17	0	multi-exon	FALSE	canonical	1	2	junction_6	345.335408521481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGGTGTTGAGA	-74374235	True	NA	-3	True	ATTAAA	-19	NA	74374718	74361154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74363613_74363629_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
WTC11_00055056	chr2	-	2060	3	FSM	ENSG00000284308.2	ENST00000684111.1	2059	3	0	-1	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCTCTTGTCAGTT	-74421459	True	NA	-2	True	AATAAA	-25	NA	74421619	74414175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74415928_74416010_74416242_74421542
WTC11_00055058	chr2	-	2316	6	FSM	ENSG00000115275.15	ENST00000649601.1	2316	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	103.640532611522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTATTTTTCTAAATAA	-74457178	False	8184	-45	True	NA	NA	NA	74465362	74461101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189_74463220_74463379_74463387_74464495_74464723_74464895_74464988_74465313
WTC11_00055060	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-74498843	False	121	0	True	AATAAA	-18	NA	74499603	74497516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74498319_74499332
WTC11_00055062	chr2	-	984	4	FSM	ENSG00000115307.17	ENST00000486234.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_3	65.5252283899534	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACCCAACTCACAACAGG	-74513756	False	NA	-119	True	NA	NA	NA	74528085	74526745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527364_74527470_74527591_74527735
WTC11_00055063	chr2	-	3601	12	NIC	ENSG00000115318.12	novel	3689	14	NA	NA	-29	-150	intron_retention	FALSE	canonical	3	89	junction_11	52.4253109017056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCAGGCCCAGCACCGA	-74553853	True	NA	NA	False	NA	NA	NA	74553990	74533402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368_74549584_74550184_74550349_74552321
WTC11_00055064	chr2	-	2542	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	17.2638350316493	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGTGCTTCAGATTAC	-74647994	True	NA	-2	True	AATAAA	-15	NA	74648330	74557884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
WTC11_00055067	chr2	-	576	4	FSM	ENSG00000159374.18	ENST00000422394.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.0830459735946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCATGGAGATTTTCTT	-74647973	True	NA	NA	False	NA	NA	NA	74648309	74581794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74581848_74614963_74615150_74640035_74640328_74648264
WTC11_00055068	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-75560798	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
WTC11_00055069	chr2	-	1747	5	FSM	ENSG00000115363.14	ENST00000410113.5	1747	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGAGACAAGAAAATTTT	-75560797	True	NA	NA	False	AATAAA	-21	NA	75560938	75492485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75526111_75526200_75560679
WTC11_00055070	chr2	-	237	1	FSM	ENSG00000226247.1	ENST00000423067.1	340	1	10	93	10	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCGGTGTCATTCAC	NA	False	NA	NA	False	NA	NA	NA	75651617	75651380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75651400_75651600
WTC11_00055071	chr2	-	3622	3	FSM	ENSG00000176204.14	ENST00000409088.3	3616	3	1	-7	1	7	multi-exon	FALSE	canonical	1	1	junction_2	9	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGCTTGATGTTTTT	-77522211	True	NA	NA	False	AATAAA	-19	NA	77522375	77516660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_77519865_77521667_77521819_77522108
WTC11_00055073	chr2	-	2548	2	FSM	ENSG00000162951.11	ENST00000295057.4	2602	2	58	-4	36	4	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGGTGTAACCTAAAT	-80304661	False	NA	NA	False	AATAAA	-20	NA	80304694	80301873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_80303879_80304151
WTC11_00055074	chr2	-	1328	10	FSM	ENSG00000163541.12	ENST00000651342.1	1328	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	185.230786977879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTACTATTTGATTT	-84455313	True	NA	-28	True	NA	NA	NA	84459285	84423550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84436051_84436128_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
WTC11_00055075	chr2	-	4052	8	NNC	ENSG00000186854.11	novel	1814	7	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	9.50187951332337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	NA	False	NA	-19	True	AATAAA	-27	NA	84881362	84821665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_84822101_84823952_84824205_84832054_84832146_84836281_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
WTC11_00055076	chr2	-	6056	5	NNC	ENSG00000152291.15	novel	6138	5	NA	NA	-297	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	79.1643859320591	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATACATTTATTTATTT	NA	False	NA	41	True	AATAAA	-24	NA	85328548	85318022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_85322742_85324914_85324999_85326507_85326805_85327361_85327686_85327916
WTC11_00055077	chr2	-	1247	10	NIC	ENSG00000042493.16	novel	1250	10	NA	NA	20	0	intron_retention	FALSE	canonical	2	23	junction_9	236.718512839591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-85409801	False	965	-9	True	AATAAA	-34	NA	85409812	85394752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85409765
WTC11_00055078	chr2	-	1283	10	NNC	ENSG00000042493.16	novel	1250	10	NA	NA	-1057	0	intron_retention	FALSE	canonical	2	40	junction_9	231.713904056993	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	NA	False	NA	-9	True	AATAAA	-34	NA	85419489	85394752	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85419406
WTC11_00055079	chr2	-	1197	11	NIC	ENSG00000042493.16	novel	1151	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	292.78053213969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGCGTCTTCCTGCCC	-85408913	True	NA	NA	False	NA	NA	NA	85414018	85394892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413142_85413245_85413983
WTC11_00055082	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	22.4629324295234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	-85591350	False	11309	-31	True	NA	NA	NA	85602659	85598577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
WTC11_00055084	chr2	-	2474	7	FSM	ENSG00000115525.18	ENST00000639608.1	2457	7	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.6141675934562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTAAAAAGATGAAAAA	-85888643	True	NA	-56	True	AAGAAA	-44	NA	85888990	85839188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848382_85861180_85861293_85863361_85863486_85888823
WTC11_00055085	chr2	-	2494	8	FSM	ENSG00000115525.18	ENST00000638227.1	2489	8	0	-5	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.9454542630668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTAAAAAGATGAAAAA	-85888653	True	NA	-56	True	AAGAAA	-44	NA	85889000	85839188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85870071_85870259_85888823
WTC11_00055088	chr2	-	507	4	FSM	ENSG00000132305.22	ENST00000486633.1	631	4	0	124	0	-124	multi-exon	FALSE	canonical	3	557	junction_1	105.122151170277	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTTAAAATTATAGGT	-86190712	True	NA	NA	False	NA	NA	NA	86195450	86173631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86173762_86179432_86179623_86181298_86181373_86195337
WTC11_00055089	chr2	-	4315	6	FSM	ENSG00000172116.23	ENST00000390655.12	4794	6	0	479	0	-479	multi-exon	FALSE	canonical	1	2	junction_3	1.35646599662505	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTAGTCCCAGCTAT	-86861870	False	NA	NA	False	TTTAAA	-24	NA	86861886	86838645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86842320_86844921_86844959_86846683_86846774_86852996_86853087_86858056_86858417_86861822
WTC11_00055090	chr2	-	6654	23	NNC	ENSG00000185304.16	novel	6770	23	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_15	24.7692241059327	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACGTGAATCATTTAAA	-87824823	True	NA	NA	False	ATTAAA	-15	NA	87825825	87755959	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798030_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
WTC11_00055091	chr2	-	6684	23	NNC	ENSG00000185304.16	novel	6770	23	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	26.5973962560869	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACGTGAATCATTTAAA	-87824823	True	NA	NA	False	ATTAAA	-15	NA	87825825	87755959	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798063_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818621_87825657
WTC11_00055092	chr2	-	6925	23	FSM	ENSG00000185304.16	ENST00000398146.5	6770	23	-156	1	-156	-1	multi-exon	FALSE	canonical	2	17	junction_17	24.5961177478167	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACGTGAATCATTTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	87825952	87755960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798175_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
WTC11_00055093	chr2	-	2717	2	FSM	ENSG00000172071.15	ENST00000682656.1	3861	2	0	1144	0	684	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGTCCCTAGGAGG	-88691408	True	NA	NA	False	NA	NA	NA	88691476	88686313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88688309_88690754
WTC11_00055095	chr2	-	2753	9	NNC	ENSG00000084090.14	novel	3377	8	NA	NA	12	88444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.344962118961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGTTTTTCCCAGTG	-96208139	False	NA	NA	False	AAAAAG	-8	NA	96208169	96096414	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96096449_96184858_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
WTC11_00055096	chr2	-	2459	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	-52	-13	-52	13	multi-exon	FALSE	canonical	1	1	junction_2	2.86956007081225	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCTTTAACACCCCT	-96138541	False	50	6	True	AATAAA	-33	NA	96138554	96122804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
WTC11_00055098	chr2	-	3943	5	NNC	ENSG00000135956.9	novel	3099	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	72.1504504490443	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTATTTATTTTTT	-96264000	True	NA	-13	True	AATAAA	-19	NA	96265994	96248513	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96249180_96251481_96254116_96254832_96254998_96265137_96265490_96265868
WTC11_00055100	chr2	-	5496	19	NIC	ENSG00000114982.19	novel	5253	21	NA	NA	305	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	31.7113232882413	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-96635183	False	NA	-13	True	ATTAAA	-17	NA	96637715	96593169	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96595632_96601642_96601777_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920
WTC11_00055101	chr2	-	5240	22	FSM	ENSG00000114982.19	ENST00000666923.1	5226	22	0	-14	0	0	multi-exon	FALSE	canonical	2	2	junction_7	40.7506660073839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-96635784	True	NA	-13	True	ATTAAA	-17	NA	96638316	96593169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96606969_96607048_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
WTC11_00055106	chr2	-	3734	16	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	619	94695	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	93.1621286909129	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCAACACCAGACTCCT	-96867851	True	NA	NA	False	NA	NA	NA	96869461	96765022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96765056_96859738_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869186
WTC11_00055107	chr2	-	3667	16	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	0	94695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.9512839355935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCAACACCAGACTCCT	-96868972	True	NA	NA	False	NA	NA	NA	96870080	96765022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96765056_96859738_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869875
WTC11_00055108	chr2	-	3597	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_14	77.7780725617996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGCTCTGATGGGGCTA	-96868553	False	1610	-19	True	AATAAA	-16	NA	96868586	96859738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96868415
WTC11_00055109	chr2	-	3723	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	616	-2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_14	69.5479573197297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	-96867854	True	NA	0	True	AATAAA	-35	NA	96869464	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869186
WTC11_00055110	chr2	-	3358	9	ISM	ENSG00000196912.13	ENST00000258459.12	5898	44	66452	41	-11816	-38	3prime_fragment	FALSE	canonical	2	10	junction_8	9.35080210463252	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCAAAAGTATTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	97523425	97504838	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_97506436_97507035_97507066_97507563_97507658_97507994_97508066_97509580_97509734_97511137_97512053_97513179_97513364_97515731_97515946_97523325
WTC11_00055111	chr2	-	2580	19	ISM	ENSG00000196912.13	ENST00000443455.5	1661	21	-434	1296	-421	-1296	5prime_fragment	FALSE	canonical	3	11	junction_2	7.52218939759784	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGGAATATTTTAATAA	-97589671	True	NA	NA	False	NA	NA	NA	97590298	97548860	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_97549492_97549585_97549615_97551288_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97578905_97579044_97580461_97580569_97584943_97585118_97585283_97585399_97589524
WTC11_00055112	chr2	-	6120	40	NIC	ENSG00000075568.17	novel	6701	41	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	2	9	junction_12	13.7545880218286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTGTGGTTTTTTTT	-97995418	False	NA	0	True	AATAAA	-20	NA	97995551	97756333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
WTC11_00055113	chr2	-	661	3	FSM	ENSG00000075568.17	ENST00000480724.1	637	3	0	-24	0	24	multi-exon	FALSE	canonical	3	67	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGTATGGAACTCTGAG	NA	False	NA	NA	False	NA	NA	NA	97796404	97793265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97793554_97794929_97795116_97796217
WTC11_00055115	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	5.38722769355651	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-98730848	True	NA	0	True	AATAAA	-17	NA	98731132	98619105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
WTC11_00055116	chr2	-	2048	8	NIC	ENSG00000135951.16	novel	3160	17	NA	NA	15	5022	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	2.91372543633873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATACTATAGTCAAAT	-99140744	True	NA	NA	False	AATAAA	-18	NA	99141165	99104380	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141082
WTC11_00055117	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154754	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154692
WTC11_00055118	chr2	-	813	2	FSM	ENSG00000135945.10	ENST00000465086.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCAGCTACCCCCAAA	-99403416	False	NA	NA	False	ACTAAA	-39	NA	99403430	99402529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99402801_99402888
WTC11_00055120	chr2	-	3417	18	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-129	3418	0	5	5prime_fragment	FALSE	canonical	3	84	junction_8	15.5981100798233	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGGTGATGCAGTTG	-101149343	True	NA	-5	True	ATTAAA	-20	NA	101151382	101011034	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
WTC11_00055121	chr2	-	2962	18	NNC	ENSG00000204634.13	novel	1093	3	NA	NA	6	-8129	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	30.9829733350142	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGCCAGGGTAAT	-101149337	True	NA	NA	False	NA	NA	NA	101151376	101019168	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_101019226_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
WTC11_00055122	chr2	-	6255	4	FSM	ENSG00000175874.10	ENST00000324768.6	6292	4	32	5	-5	-5	multi-exon	FALSE	canonical	2	5	junction_1	8.48528137423857	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATATATAGTCCTTTCA	-101387279	True	NA	NA	False	ATTAAA	-13	NA	101387471	101345554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101351071_101355252_101355367_101383532_101383703_101387016
WTC11_00055125	chr2	-	1637	3	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	-28	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTTGATAATGTAAT	-105336909	True	NA	1	True	AATATA	-22	NA	105337503	105334026	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_105335069_105336304_105336460_105337063
WTC11_00055126	chr2	-	1200	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	32	-11	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTGATTCTTGTT	-105336849	True	NA	-10	True	AATATA	-11	NA	105337443	105334037	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_105335069_105337274
WTC11_00055129	chr2	-	927	3	NNC	ENSG00000214184.3	novel	574	2	NA	NA	33	2352	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTCTCAGA	-108533952	True	NA	NA	False	AATATA	-15	NA	108534149	108505162	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_108505790_108511929_108512013_108533932
WTC11_00055130	chr2	-	759	1	FSM	ENSG00000259863.1	ENST00000567491.1	1604	1	-90	935	-90	-935	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGCGTCAGAGCAACGGA	NA	False	NA	NA	False	NA	NA	NA	109129020	109128261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109128300_109129000
WTC11_00055131	chr2	-	980	6	FSM	ENSG00000186522.15	ENST00000486678.6	980	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	152.510983211046	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGGGGTTCTTGGGA	-109614056	False	NA	NA	False	AAAACA	-11	NA	109614093	109564365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109593050_109593120_109613797
WTC11_00055133	chr2	-	408	1	FSM	ENSG00000233707.3	ENST00000434894.1	385	1	34	-57	34	57	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTGGTTTATCCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	109737489	109737081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109737100_109737500
WTC11_00055134	chr2	-	2225	18	FSM	ENSG00000144061.14	ENST00000676028.1	2225	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	27.8505651511555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTTGCAAATCATCTA	-110204962	False	8723	NA	False	AAGAAA	-30	NA	110204989	110123437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
WTC11_00055135	chr2	-	417	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	30.2140511829991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATAATTTTATTTT	-110204974	False	8723	NA	False	AATAAA	-16	NA	110205001	110178755	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
WTC11_00055136	chr2	-	1136	2	ISM	ENSG00000273471.1	ENST00000488671.1	1528	4	9940	-76	9940	76	3prime_fragment	FALSE	canonical	3	40	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTTTTATTTAGCA	NA	False	NA	NA	False	AAAAAG	-25	NA	110423733	110386334	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_110387398_110423660
WTC11_00055139	chr2	-	7229	23	NIC	ENSG00000183054.12	novel	7305	23	NA	NA	193	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	45.6655330538351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCCACTGTCTCTTTG	NA	False	NA	NA	False	ATTAAA	-29	NA	110576630	110513806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576431
WTC11_00055140	chr2	-	375	3	FSM	ENSG00000183054.12	ENST00000455695.1	568	3	193	0	193	0	multi-exon	FALSE	canonical	3	14	junction_2	64	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTAAGTTATAAGATTC	NA	False	NA	NA	False	AAGAAA	-26	NA	110576630	110567967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110568076_110569656_110569725_110576431
WTC11_00055142	chr2	-	3366	5	FSM	ENSG00000172965.17	ENST00000659933.1	3345	5	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.34477204006491	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAAGTGAAATGCCTG	-111494886	True	NA	NA	False	AATAAA	-39	NA	111495039	111207754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111208662_111233627_111233740_111344060_111344238_111365560_111367576_111494884
WTC11_00055143	chr2	-	6106	2	FSM	ENSG00000172965.17	ENST00000673654.1	6654	2	0	548	0	-548	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAACAAACCTACAAAT	-111494891	True	NA	NA	False	NA	NA	NA	111495044	111361629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111367576_111494884
WTC11_00055145	chr2	-	2026	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	-4	0	4	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTCTTAGAGTTACTGA	-112645615	True	NA	NA	False	AATAAA	-19	NA	112645690	112641827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
WTC11_00055148	chr2	-	894	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	3	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625952	True	NA	NA	False	CATAAA	-45	NA	113627089	113611683	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_113612248_113625608_113625730_113626880
WTC11_00055150	chr2	-	2284	7	FSM	ENSG00000115084.15	ENST00000409342.1	2284	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	27.1231758219178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCCTTTCATACTC	-113753962	True	NA	NA	False	TATAAA	-16	NA	113756620	113741883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113755854
WTC11_00055151	chr2	-	412	2	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCCCAGTTTATCT	-117525811	True	NA	-7	True	AATAAA	-15	NA	117525850	117525293	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_117525501_117525645
WTC11_00055152	chr2	-	6921	24	NIC	ENSG00000125633.11	novel	6833	24	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	19.9450094671951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-118012228	True	NA	4	True	GATAAA	-16	NA	118014161	117915480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958479_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
WTC11_00055154	chr2	-	424	1	FSM	ENSG00000233741.1	ENST00000441321.1	413	1	-28	17	-28	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTATAGTTTTAGATG	NA	False	NA	NA	False	NA	NA	NA	119993639	119993215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_119993200_119993600
WTC11_00055155	chr2	-	5299	13	ISM	ENSG00000074054.20	ENST00000452274.6	3966	33	100976	-3019	-14168	73	3prime_fragment	FALSE	canonical	2	76	junction_12	112.893755363173	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCATTTCGATAAAGGA	-121402234	False	NA	72	True	NA	NA	NA	121402244	121337702	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121401867
WTC11_00055156	chr2	-	7896	37	NIC	ENSG00000074054.20	novel	5660	39	NA	NA	0	73	combination_of_known_junctions	FALSE	canonical	1	4	junction_12	107.682389059587	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCATTTCGATAAAGGA	-121648535	True	NA	72	True	NA	NA	NA	121649438	121337702	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121409023_121409048_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
WTC11_00055157	chr2	-	7166	28	NNC	ENSG00000074054.20	novel	7877	39	NA	NA	-9225	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	133.750827850213	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	NA	False	NA	-1	True	AATAAA	-16	NA	121470420	121337775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121460008_121460126_121461100_121461194_121462531_121462606_121469807
WTC11_00055158	chr2	-	7830	36	NIC	ENSG00000074054.20	novel	8092	40	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_12	106.727675579926	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	-121649452	False	NA	-1	True	AATAAA	-16	NA	121649469	121337775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
WTC11_00055159	chr2	-	5660	39	FSM	ENSG00000074054.20	ENST00000455322.6	5660	39	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	168.442580860931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACCCTCATCTCTGGG	-121648535	True	NA	NA	False	GGGGCT	-4	NA	121649438	121339989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121409023_121409048_121410865_121410970_121425138_121425307_121427403_121427431_121430072_121430178_121444938_121444963_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
WTC11_00055161	chr2	-	718	1	FSM	ENSG00000213236.3	ENST00000440317.1	728	1	125	-115	125	115	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTATTTGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	126558037	126557319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_126557300_126558000
WTC11_00055163	chr2	-	2375	16	FSM	ENSG00000136717.15	ENST00000351659.7	2365	16	0	-10	0	10	multi-exon	FALSE	canonical	1	1	junction_5	69.9932060195051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTCCCTCTTCTTGT	-127107150	True	NA	1	True	GATAAA	-24	NA	127107288	127048016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00055164	chr2	-	2282	15	FSM	ENSG00000136717.15	ENST00000393041.7	2272	15	0	-10	0	10	multi-exon	FALSE	canonical	1	1	junction_5	71.3801264287168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTCCCTCTTCTTGT	-127107150	True	NA	1	True	GATAAA	-24	NA	127107288	127048016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00055165	chr2	-	2229	15	NIC	ENSG00000136717.15	novel	2365	16	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	99	junction_4	42.1060371840778	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAAAACGTGTGTGTAT	-127107122	True	NA	-18	True	GATAAA	-5	NA	127107269	127048035	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00055166	chr2	-	2327	8	FSM	ENSG00000186684.14	ENST00000409327.2	2327	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	6.79135104228841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	-127220019	True	NA	NA	False	NA	NA	NA	127220313	127186409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127219988
WTC11_00055167	chr2	-	2725	2	FSM	ENSG00000163161.14	ENST00000491292.5	4018	2	1301	-8	1301	1	multi-exon	FALSE	canonical	3	340	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTACAAGTGTTTTT	-127261563	False	NA	-3	True	AATAAA	-24	NA	127261581	127257288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295
WTC11_00055168	chr2	-	2807	16	FSM	ENSG00000163161.14	ENST00000645467.1	2807	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	115.111655940367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAACAGAATGGACCA	-127289119	True	NA	-34	True	TATAAA	-38	NA	127294144	127257319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127284170_127284290_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
WTC11_00055169	chr2	-	859	2	FSM	ENSG00000287742.1	ENST00000657275.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATATATAATTTTTT	-127408138	False	83	NA	False	NA	NA	NA	127408221	127406730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127407502_127408133
WTC11_00055170	chr2	-	592	3	FSM	ENSG00000163166.15	ENST00000497888.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	13	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACTTTATAATGCTAAAG	NA	False	NA	NA	False	AAGAAA	-1	NA	127504791	127502578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127502873_127503386_127503577_127504683
WTC11_00055171	chr2	-	870	2	FSM	ENSG00000163166.15	ENST00000486662.1	870	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGAGCTTCCCAAA	-127520583	True	NA	NA	False	NA	NA	NA	127526482	127505190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127505753_127526174
WTC11_00055172	chr2	-	4777	9	NIC	ENSG00000144233.11	novel	4803	9	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	22.6684665339321	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTTTTGTTCTGCTTTT	-127885647	True	NA	NA	False	AATAAA	-15	NA	127885908	127861631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
WTC11_00055173	chr2	-	4003	21	NIC	ENSG00000136715.19	novel	4084	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_18	42.9155857469055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGCGCAGTTTGCAT	-128022316	True	NA	-11	True	AATAAA	-18	NA	128028057	127941225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016473_128017679_128017916_128026180_128026299_128027939
WTC11_00055174	chr2	-	3975	20	NIC	ENSG00000136715.19	novel	4084	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	63	junction_6	32.7935707502016	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGCGCAGTTTGCAT	-128022318	True	NA	-11	True	AATAAA	-18	NA	128028059	127941225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00055175	chr2	-	444	1	FSM	ENSG00000227653.1	ENST00000427740.1	390	1	-6	-48	-6	48	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGGTTCAATGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	128519183	128518739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_128518700_128519200
WTC11_00055177	chr2	-	3679	12	FSM	ENSG00000286058.1	ENST00000325390.7	3679	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10.4137544138382	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTGAGAAGTCAGTAA	-130051120	False	NA	NA	False	AATAAA	-12	NA	130051131	130026844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130027538_130028308_130028484_130034309_130034378_130034710_130034832_130035133_130035263_130039133_130039179_130040389_130040561_130045356_130045581_130047181_130047380_130048425_130048620_130049067_130049413_130049815
WTC11_00055180	chr2	-	3537	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-276	6	intron_retention	FALSE	canonical	3	50	junction_3	42.1863425767155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGTCGTTGTCATTAA	-130428435	False	NA	NA	False	AATAAA	-20	NA	130428452	130416748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
WTC11_00055181	chr2	-	1225	1	FSM	ENSG00000236516.1	ENST00000451959.1	1225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGGCTACGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	131300444	131299219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131299200_131300400
WTC11_00055182	chr2	-	1498	1	FSM	ENSG00000214077.4	ENST00000444815.2	1067	1	-272	-159	-272	159	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGATTTTATTTAAACT	-131425040	True	NA	NA	False	AGTAAA	-2	NA	131425139	131423641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131423600_131425100
WTC11_00055183	chr2	-	593	4	NNC	ENSG00000173272.16	novel	599	3	NA	NA	0	-5507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	757.891959465346	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAGGCAAAATTAACG	-131483459	True	NA	NA	False	AAAAAG	-4	NA	131492376	131475315	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131475345_131483973_131484219_131491875_131492025_131492206
WTC11_00055184	chr2	-	427	2	NIC	ENSG00000173272.16	novel	599	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-131483457	True	NA	-18	True	AATAAA	-30	NA	131492374	131483959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_131484219_131492206
WTC11_00055185	chr2	-	292	2	NNC	ENSG00000173272.16	novel	382	3	NA	NA	-283	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCTCTCTACTGTTTT	-131492689	True	NA	-20	True	AATAAA	-28	NA	131493026	131483961	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131484219_131492991
WTC11_00055189	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-136118028	True	NA	0	True	AATAAA	-18	NA	136118149	136114348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136115913_136118045
WTC11_00055190	chr2	-	10508	11	FSM	ENSG00000121964.15	ENST00000392869.6	10514	11	3	3	0	-3	multi-exon	FALSE	canonical	3	49	junction_4	25.1547212268393	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTGTGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-26	NA	144235737	143938070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
WTC11_00055191	chr2	-	2953	12	FSM	ENSG00000121964.15	ENST00000409214.5	2954	12	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_11	35.5334785684367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGCTTTTGAAATGAGT	NA	False	NA	NA	False	GATAAA	-37	NA	144294492	143945753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144294364
WTC11_00055192	chr2	-	2682	12	NNC	ENSG00000121964.15	novel	10585	12	NA	NA	53	91	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	44.0429917690311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCCGGATGAACAA	-144330928	True	NA	86	True	AATACA	-5	NA	144332459	143945922	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_143947136_143951981_143952074_143952772_143952844_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144317478_144317589_144319718_144319869_144332438
WTC11_00055194	chr2	-	2531	7	ISM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	67682	0	1	5prime_fragment	FALSE	canonical	3	90	junction_1	15.91295768304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTCCTTTGTAT	-144330981	True	NA	NA	False	AATAAA	-24	NA	144332512	144005749	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
WTC11_00055196	chr2	-	260	1	FSM	ENSG00000226340.1	ENST00000413336.1	545	1	257	28	257	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAAGAAGCCATCAGT	NA	False	NA	NA	False	NA	NA	NA	148872540	148872280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_148872300_148872500
WTC11_00055197	chr2	-	1462	9	FSM	ENSG00000168288.13	ENST00000422782.2	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	502.238924716116	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTCCCAAAATAAATCA	-149574032	True	NA	-71	True	AAAAAG	-18	NA	149587778	149569671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_149570169_149571084_149571172_149572229_149572332_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
WTC11_00055198	chr2	-	3404	1	Genic_Genomic	ENSG00000184898.7	novel	NA	NA	NA	NA	11132	697	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAATACATAGACATTTG	NA	False	NA	NA	False	ATTAAA	-33	NA	151250646	151247242	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_151247200_151250600
WTC11_00055199	chr2	-	3050	9	FSM	ENSG00000162980.17	ENST00000446896.7	1268	9	0	-1782	0	1688	multi-exon	FALSE	canonical	0	0	junction_8	274.625853435178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGTGGTGGTTATTTT	-151820137	True	NA	-5	True	AATAAA	-21	NA	151828441	151787295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151789248_151789751_151789883_151791757_151791909_151803006_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
WTC11_00055200	chr2	-	312	4	FSM	ENSG00000182389.20	ENST00000638056.1	605	4	0	293	0	58	multi-exon	FALSE	canonical	3	5	junction_1	1.88561808316413	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAATATCATCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	151880822	151870530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151870612_151872416_151872494_151876425_151876557_151880799
WTC11_00055208	chr2	-	922	5	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	29.3033701133504	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTACATATCTTTTGAGA	NA	False	NA	-7	True	AATAAA	-20	NA	156725526	156718789	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719061_156719246_156719341_156719556_156719669_156723247_156723446_156725279
WTC11_00055209	chr2	-	2748	4	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	24.4585817704589	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTACATATCTTTTGAG	NA	False	NA	-8	True	AATAAA	-19	NA	156725537	156718790	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719043_156719246_156719341_156719556_156719669_156723247
WTC11_00055210	chr2	-	863	5	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_3	43.5574333495444	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTACATATCTTTTGA	NA	False	NA	-9	True	AATAAA	-18	NA	156725524	156718791	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719043_156719246_156719341_156719556_156719632_156723247_156723446_156725279
WTC11_00055212	chr2	-	1530	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	23	-1	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_10	20.9083715291268	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCAGTGTCCTAAGT	-159285999	True	NA	-8	True	AATAAA	-10	NA	159286646	159235801	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159282874_159286582
WTC11_00055214	chr2	-	375	3	FSM	ENSG00000226266.7	ENST00000418770.5	375	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGTAAATATCTGGATAA	-159711607	False	411	NA	False	AATGAA	-11	NA	159712018	159670711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159670811_159710716_159710895_159711920
WTC11_00055215	chr2	-	3859	5	FSM	ENSG00000241399.7	ENST00000553424.5	3866	5	9	-2	-4	0	multi-exon	FALSE	canonical	2	2	junction_4	9.40744386111339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	-159797969	True	NA	2	True	AATAAA	-16	NA	159798246	159768627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159798131
WTC11_00055216	chr2	-	6918	35	FSM	ENSG00000054219.11	ENST00000263636.5	6932	35	8	6	1	-6	multi-exon	FALSE	canonical	2	5	junction_11	3.9067858628989	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGTGCTGGAGTTGAT	-159904448	True	NA	NA	False	AATAAA	-24	NA	159904748	159803360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159805223_159806972_159807141_159808448_159808572_159810525_159810676_159815404_159815574_159816805_159817033_159819725_159819921_159831669_159831787_159834043_159834212_159835479_159835646_159840728_159840956_159842244_159842375_159849979_159850141_159850361_159850468_159852200_159852341_159853272_159853353_159853629_159853698_159854359_159854536_159854903_159854940_159858361_159858477_159860820_159860890_159864838_159864921_159872450_159872594_159875443_159875644_159878323_159878494_159878632_159878722_159879258_159879370_159881082_159881241_159882123_159882316_159885152_159885294_159886419_159886531_159890212_159890378_159893913_159894085_159898687_159899060_159904588
WTC11_00055218	chr2	-	4190	14	NNC	ENSG00000153250.21	novel	4286	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_13	86.0988148417838	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160406412	True	NA	-4	True	AATAAA	-18	NA	160407889	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160407463
WTC11_00055219	chr2	-	4400	14	NIC	ENSG00000153250.21	novel	4286	14	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	69.3051736928183	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160408040	True	NA	-4	True	AATAAA	-18	NA	160408096	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
WTC11_00055220	chr2	-	4038	14	NNC	ENSG00000153250.21	novel	4286	14	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_13	88.9138270408672	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492328	False	NA	-4	True	AATAAA	-18	NA	160493571	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160493288
WTC11_00055223	chr2	-	3593	16	FSM	ENSG00000115267.9	ENST00000649979.2	3581	16	-12	0	-12	0	multi-exon	FALSE	canonical	2	3	junction_7	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTTTAAGAACACAATA	-162318633	True	NA	NA	False	AATAAA	-25	NA	162318696	162267073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_162267380_162267478_162267570_162268086_162268278_162272225_162272388_162273794_162273945_162276686_162276947_162277414_162277694_162278204_162278329_162279995_162280113_162281327_162281546_162282365_162282577_162288134_162288356_162293563_162293669_162306708_162306856_162310764_162310934_162317854
WTC11_00055224	chr2	-	4936	3	NNC	ENSG00000182263.14	novel	600	2	NA	NA	0	4080	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCTACCCTGTGCA	-163735972	False	NA	NA	False	AATAAA	-14	NA	163735984	163607273	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_163611807_163612328_163612585_163735837
WTC11_00055226	chr2	-	2838	3	NNC	ENSG00000182263.14	novel	746	3	NA	NA	-168	-119336	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	66.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATTTTAACTCTCAAT	-163736168	False	NA	NA	False	AATAAA	-20	NA	163736180	163730689	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_163733015_163734902_163735073_163735837
WTC11_00055228	chr2	-	3098	11	NNC	ENSG00000115339.14	novel	3436	11	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	43.8766452682973	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTTAAGTTTTTTT	-165791473	True	NA	-2	True	AATAAA	-22	NA	165794189	165747802	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757183_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
WTC11_00055229	chr2	-	1459	2	FSM	ENSG00000123607.16	ENST00000680249.1	3857	2	2419	-21	2419	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTGGTGGTCCTACCT	NA	False	NA	NA	False	ATTAAA	-1	NA	165859533	165857474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165857615_165858214
WTC11_00055231	chr2	-	1389	8	NNC	ENSG00000169432.19	novel	2283	7	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.99205998963212	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCATTTTCTTATTTT	-166374027	True	NA	-20	True	AATAAA	-8	NA	166375893	166302059	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_166302301_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
WTC11_00055233	chr2	-	338	1	FSM	ENSG00000214211.2	ENST00000397819.2	2403	1	756	1309	756	-1309	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAGAAAACATATATTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	167715309	167714971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_167715000_167715300
WTC11_00055235	chr2	-	3549	15	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	99.8840143693204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAGTTTTTATTTAAAA	-169569292	True	NA	-5	True	NA	NA	NA	169573865	169529831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169572995
WTC11_00055238	chr2	-	517	2	Genic_Genomic	ENSG00000233762.3	novel	447	1	NA	NA	0	27624	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAAATTATGCTTCATC	-171517696	False	NA	NA	False	NA	NA	NA	171517716	171489645	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_171489668_171517221
WTC11_00055240	chr2	-	5665	1	FSM	ENSG00000237617.1	ENST00000422627.1	201	1	-5256	-208	-5256	208	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATGTCTCAAGGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	173711404	173705739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173705700_173711400
WTC11_00055241	chr2	-	7789	7	NNC	ENSG00000172845.18	novel	11714	7	NA	NA	-11	3830	intron_retention	FALSE	canonical	2	3	junction_6	130.102523675241	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTGGACATCTGGTCA	-173965105	False	NA	NA	False	NA	NA	NA	173965384	173904699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964543_173965164
WTC11_00055243	chr2	-	4738	8	NNC	ENSG00000115935.18	novel	4727	8	NA	NA	-361	0	intron_retention	FALSE	canonical	3	8	junction_7	3.75798469656169	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTCAACTGGTGGTT	-174585761	True	NA	-10	True	AATAAA	-15	NA	174585950	174559573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174585735
WTC11_00055247	chr2	-	1559	2	FSM	ENSG00000229337.2	ENST00000654107.1	1818	2	0	259	0	-259	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCGCCATGGCTCACACC	-177212513	False	NA	NA	False	NA	NA	NA	177212567	177210829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177212318_177212496
WTC11_00055250	chr2	-	3498	2	FSM	ENSG00000180228.14	ENST00000676752.1	3498	2	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	NA	False	NA	-27	True	AATAAA	-7	NA	178438827	178431439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144
WTC11_00055251	chr2	-	742	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	42	-146	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	-178477777	True	NA	0	True	AATAAA	-25	NA	178478553	178465598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469786_178478278
WTC11_00055252	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	22.2311093340441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	-178478488	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
WTC11_00055253	chr2	-	3193	10	FSM	ENSG00000144331.20	ENST00000410066.7	3395	10	203	-1	203	1	multi-exon	FALSE	canonical	0	0	junction_7	5.88364546438832	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTATTTTCAGTGTT	NA	False	NA	-8	True	AATAAA	-18	NA	179861409	179441980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179443469_179444875_179444978_179445549_179445729_179446524_179446771_179483271_179483435_179518527_179518639_179544826_179544970_179769502_179769803_179770520_179770673_179861100
WTC11_00055254	chr2	-	862	1	FSM	ENSG00000226564.1	ENST00000434913.1	548	1	-143	-171	-143	171	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTCTGATGCATTCTTC	NA	False	NA	-1	True	AATAAA	-25	NA	180873557	180872695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_180872700_180873600
WTC11_00055255	chr2	-	461	2	FSM	ENSG00000236153.1	ENST00000428080.1	265	2	-229	33	-229	-33	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAAGATGTATAGAGT	-180980308	False	NA	NA	False	NA	NA	NA	180980319	180979459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_180979667_180980065
WTC11_00055256	chr2	-	1715	2	FSM	ENSG00000162992.5	ENST00000295108.4	2493	2	0	778	0	-4	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCTAATTTATACAAAATA	NA	False	NA	NA	False	NA	NA	NA	181680517	181677244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_181678872_181680429
WTC11_00055257	chr2	-	4652	32	NNC	ENSG00000061676.15	novel	20332	31	NA	NA	0	7704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.063065827176	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAAG	-183030230	True	NA	NA	False	NA	NA	NA	183038457	182901410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_182901436_182924819_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183037991
WTC11_00055258	chr2	-	4653	32	NNC	ENSG00000061676.15	novel	20332	31	NA	NA	0	7704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.063065827176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAAG	-183030230	True	NA	NA	False	NA	NA	NA	183038457	182901410	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_182901437_182924819_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183037991
WTC11_00055262	chr2	-	246	1	FSM	ENSG00000225406.1	ENST00000414888.1	684	1	486	-48	486	48	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTGCAAGGGAAGT	NA	False	NA	NA	False	NA	NA	NA	185547332	185547086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_185547100_185547300
WTC11_00055263	chr2	-	784	3	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	6	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATAGTATCATGTATC	-186485484	True	NA	NA	False	AGTAAA	-7	NA	186486156	186422896	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_186423187_186456714_186456852_186485799
WTC11_00055264	chr2	-	1403	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	-9	31572	-9	-31437	5prime_fragment	FALSE	canonical	3	44	junction_1	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTCTTTAGCCAAGACT	-187564004	True	NA	NA	False	AATAAA	-17	NA	187565769	187528452	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_187529486_187554199_187554350_187565549
WTC11_00055265	chr2	-	2394	3	NNC	ENSG00000003436.16	novel	804	5	NA	NA	139	-32159	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	21	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCATTCTTACC	-187565608	False	NA	-20	True	AATAAA	-18	NA	187565621	187529174	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187529486_187554199_187554350_187563688
WTC11_00055266	chr2	-	639	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-8	-60959	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-187564003	True	NA	1	True	AATAAA	-24	NA	187565768	187557974	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187558395_187565549
WTC11_00055267	chr2	-	642	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-10	-60961	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-187564005	True	NA	-1	True	AATAAA	-22	NA	187565770	187557976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187558398_187565549
WTC11_00055268	chr2	-	1390	3	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_2	1.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTTGGAGATATTGCAG	NA	False	NA	NA	False	TATAAA	-42	NA	187675979	187669579	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_187670022_187673666_187674306_187675670
WTC11_00055270	chr2	-	2787	9	NNC	ENSG00000128694.12	novel	1910	9	NA	NA	11	0	intron_retention	FALSE	canonical	2	16	junction_1	39.5442789793922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189761993	True	NA	-7	True	AATAAA	-18	NA	189762756	189746659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_189748082_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
WTC11_00055271	chr2	-	2201	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_8	41.342320931462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762004	True	NA	-7	True	AATAAA	-18	NA	189762767	189746659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762531
WTC11_00055272	chr2	-	1978	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	21	-4	intron_retention	FALSE	canonical	3	18	junction_8	43.4135275576634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTCAGGAATCCTTTC	-189761983	True	NA	-11	True	AATAAA	-14	NA	189762746	189746663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762566
WTC11_00055273	chr2	-	1212	1	FSM	ENSG00000273240.1	ENST00000608680.1	598	1	-616	2	-616	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGGTAATTATTTACT	-189765059	False	NA	NA	False	AATAAA	-13	NA	189765072	189763860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189763900_189765100
WTC11_00055276	chr2	-	2679	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	120	0	-120	multi-exon	TRUE	canonical	0	0	junction_5	4.5242829047783	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTGAAAATTCTCAAG	-192194790	True	NA	NA	False	NA	NA	NA	192194933	191949165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
WTC11_00055278	chr2	-	8942	28	FSM	ENSG00000197121.15	ENST00000423035.5	8942	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	15.5783783192039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAACATTAATATGTTG	-196923828	True	NA	NA	False	TATAAA	-20	NA	196926655	196835183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196841373_196842720_196842826_196843887_196844076_196844523_196844575_196845881_196846018_196847002_196847201_196847946_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196922102_196922187_196926469
WTC11_00055279	chr2	-	2414	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	-1	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	3831.99954603773	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	-197466460	True	NA	NA	False	AATAAA	-17	NA	197499918	197486584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00055281	chr2	-	2560	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	-4	0	4	multi-exon	FALSE	canonical	2	8	junction_6	9.48097510221859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTGTGTCTGTACTT	-200509672	True	NA	NA	False	AATAAA	-20	NA	200510068	200488953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
WTC11_00055284	chr2	-	1480	11	NIC	ENSG00000013441.17	novel	1682	12	NA	NA	10	7	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	34.7345649173845	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAAATTTTTTGTGCTT	-200863140	True	NA	-40	True	AATGAA	-34	NA	200864646	200853105	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
WTC11_00055285	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	36.6208046516367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	-200863055	False	NA	-130	True	NA	NA	NA	200864561	200853195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
WTC11_00055286	chr2	-	1278	8	NNC	ENSG00000240344.9	novel	1166	7	NA	NA	0	1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.680769141314	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGATGTGGTAGCCCCAG	-200889241	False	NA	NA	False	ACTAAA	-31	NA	200889266	200868936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_200868962_200871008_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
WTC11_00055287	chr2	-	3119	19	NNC	ENSG00000115942.9	novel	4288	18	NA	NA	0	40040	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.1725088404162	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGATGTGGTAGCCCCAG	-200954813	True	NA	NA	False	ACTAAA	-31	NA	200963660	200868936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_200868962_200910170_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
WTC11_00055288	chr2	-	1000	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	2	-26	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	114.948780864445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGTAAAATTACCTTC	-200889249	False	NA	-20	True	ATTAAA	-23	NA	200889274	200870981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
WTC11_00055293	chr2	-	1805	12	FSM	ENSG00000155755.20	ENST00000286196.9	1805	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	115.771219249914	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	-201643245	True	NA	33	True	AATATA	-5	NA	201643484	201623755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201643358
WTC11_00055294	chr2	-	1686	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-6	-44	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTAGTGATTGAGTAT	-201639302	True	NA	-11	True	AATAAA	-30	NA	201642659	201623799	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
WTC11_00055297	chr2	-	391	1	FSM	ENSG00000223825.5	ENST00000475212.1	503	1	228	-116	228	116	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGTCTTTCTGGTGCCC	-202201604	False	NA	NA	False	NA	NA	NA	202201658	202201267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202201300_202201700
WTC11_00055298	chr2	-	1079	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	-8	0	3	multi-exon	FALSE	canonical	3	108	junction_1	1922.20119654525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGATTTTTATTGATA	-202201202	True	NA	-9	True	AATAAA	-19	NA	202238599	202206178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
WTC11_00055299	chr2	-	7054	13	FSM	ENSG00000163596.17	ENST00000358299.7	7961	13	0	907	0	-907	multi-exon	FALSE	canonical	1	2	junction_3	2.82351239101624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTAGGCAGCTAGG	-202871732	False	NA	NA	False	AATGAA	-45	NA	202871766	202774082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202779649_202785917_202786008_202788829_202789088_202796889_202796965_202811745_202811790_202814701_202814785_202815910_202816010_202817417_202817544_202819700_202819900_202821357_202821482_202825694_202825768_202828847_202829017_202871618
WTC11_00055300	chr2	-	1207	1	FSM	ENSG00000225124.1	ENST00000413895.1	458	1	-408	-341	-408	341	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	203075550	203074343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203074300_203075600
WTC11_00055301	chr2	-	9699	14	FSM	ENSG00000173166.18	ENST00000319170.10	9699	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.63484509901921	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAACTTTTAAGAGTA	-203535287	False	NA	NA	False	AATAAA	-19	NA	203535301	203433681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203441414_203444867_203445011_203447958_203448080_203448737_203448837_203454429_203454541_203455436_203455581_203457529_203457596_203459906_203460029_203461248_203461409_203461847_203461926_203489583_203490090_203491213_203491320_203495233_203495354_203535110
WTC11_00055302	chr2	-	341	1	FSM	ENSG00000233459.1	ENST00000430003.1	1440	1	1159	-60	1159	60	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATTTATTATTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	203634857	203634516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203634500_203634900
WTC11_00055303	chr2	-	13829	8	ISM	ENSG00000114933.16	ENST00000403263.6	14128	11	29229	-314	6299	314	3prime_fragment	FALSE	canonical	2	7	junction_1	4.74234076362795	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGCCTCTTCTGTCTT	-206056929	False	NA	NA	False	TTTAAA	-1	NA	206056945	205993406	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197
WTC11_00055305	chr2	-	302	1	FSM	ENSG00000159186.4	ENST00000445875.1	636	1	404	-70	404	70	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAATAAAAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	206236467	206236165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206236200_206236500
WTC11_00055306	chr2	-	512	1	FSM	ENSG00000234491.1	ENST00000450405.1	947	1	290	145	290	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCAAATTTTGGACCC	NA	False	NA	NA	False	NA	NA	NA	206419948	206419436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206419400_206419900
WTC11_00055307	chr2	-	1168	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-6	16515	2	1847	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	-206764923	True	NA	-16	True	AATAAA	-18	NA	206765292	206754771	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
WTC11_00055308	chr2	-	3511	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-206812193	True	NA	2	True	AATAAA	-22	NA	206812276	206806875	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206810139_206812028
WTC11_00055309	chr2	-	692	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	19	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	-206812180	True	NA	-6	True	AATAAA	-14	NA	206812263	206806883	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206810036_206810139_206812028
WTC11_00055310	chr2	-	7395	5	NIC	ENSG00000118263.15	novel	1788	5	NA	NA	14	-988	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	9.80752262296652	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTGTAATAAACAGTAGAA	-207165888	False	NA	-42	True	NA	NA	NA	207166172	207075124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466_207165707_207165912
WTC11_00055311	chr2	-	2430	5	NIC	ENSG00000144401.14	novel	4805	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	243.667165412166	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-207618726	True	NA	-6	True	AATAAA	-16	NA	207625379	207609114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207609766_207612067_207613444_207621805_207621918_207624228_207624405_207625264
WTC11_00055312	chr2	-	8595	6	ISM	ENSG00000178385.15	ENST00000427836.8	9774	8	48053	0	-24	0	3prime_fragment	FALSE	canonical	3	8	junction_4	1.46969384566991	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTTTCTCATAACAAC	NA	False	NA	-18	True	AATAAA	-15	NA	207977474	207821287	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_207828497_207861104_207861263_207908513_207908578_207930925_207931120_207946366_207946513_207976650
WTC11_00055314	chr2	-	405	2	Antisense	novelGene_ENSG00000289113.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	413	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAATATCCTCCTCCC	-209304875	False	NA	NA	False	NA	NA	NA	209304898	209299319	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_209299358_209304531
WTC11_00055315	chr2	-	3534	5	ISM	ENSG00000144445.17	ENST00000452086.5	2334	8	0	55987	0	1539	5prime_fragment	FALSE	canonical	2	15	junction_4	7.69334127671456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTGTGTGTAGTTGTT	-210170777	True	NA	NA	False	AATAAA	-18	NA	210171327	210096309	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210171148
WTC11_00055317	chr2	-	1548	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	-92	0	0	multi-exon	FALSE	canonical	2	7	junction_7	52.3810822509213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAGAGTCATTCATATT	-214805334	True	NA	-26	True	NA	NA	NA	214809642	214728584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
WTC11_00055320	chr2	-	2332	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-19	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	313	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTTTTACTCTCGGTC	-216010765	True	NA	-12	True	AATAAA	-22	NA	216013632	215942795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_215943598_215944282_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
WTC11_00055323	chr2	-	6237	4	FSM	ENSG00000115461.5	ENST00000233813.5	6239	4	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCGGCTTCCTCCG	-216695324	True	NA	-1	True	AATAAA	-17	NA	216695547	216672104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216676883_216678111_216678232_216678849_216679080_216694438
WTC11_00055326	chr2	-	3353	26	FSM	ENSG00000135913.11	ENST00000418019.5	3353	26	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_24	11.0463749710029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGGCCAAACCAAAAGA	-218565341	True	NA	NA	False	NA	NA	NA	218568291	218454814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562717_218562814_218568177
WTC11_00055331	chr2	-	2881	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	-3	0	3	multi-exon	FALSE	canonical	3	6	junction_17	53.8047861932471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCACTGTGGCTTTGTGG	-219217545	True	NA	-5	True	AATAAA	-17	NA	219218994	219209768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
WTC11_00055335	chr2	-	2702	17	FSM	ENSG00000163521.16	ENST00000295759.12	2725	17	23	0	-15	0	multi-exon	FALSE	canonical	1	4	junction_14	3.45902352550543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTAGCCCTGTCTTTG	-219245409	False	357	-1	True	ATTAAA	-27	NA	219245421	219236597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243644_219245228
WTC11_00055338	chr2	-	544	1	FSM	ENSG00000124006.15	ENST00000596474.1	544	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCTTTGCCATTGTGG	-219554762	False	NA	NA	False	NA	NA	NA	219554772	219554228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219554200_219554800
WTC11_00055339	chr2	-	3504	2	NNC	ENSG00000124019.10	novel	2582	2	NA	NA	-31489	1889	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACCTTTCTAAGATTTG	-224432711	True	NA	-24	True	NA	NA	NA	224433596	224376808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_224380209_224433492
WTC11_00055344	chr2	-	2199	8	FSM	ENSG00000236432.8	ENST00000658093.1	2199	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.88228785446716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATTACTCAGTCTC	-227325179	True	NA	NA	False	AATAAA	-10	NA	227325216	227258484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227259284_227264668_227265439_227265874_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
WTC11_00055363	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.396901259971	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-236506920	True	NA	-3	True	AATAAA	-16	NA	236507476	236324150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
WTC11_00055382	chr2	-	2009	12	NIC	ENSG00000115694.15	novel	2210	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	341.528939518931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCACTTTCAATAAAGAC	-241496940	True	NA	12	True	NA	NA	NA	241508571	241495050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501527_241501709_241508005_241508136_241508504
WTC11_00055384	chr2	+	989	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	1579102	1580091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_1579100_1580100
WTC11_00055385	chr2	+	680	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTCTCAATTCATCCA	5005305	False	NA	NA	False	NA	NA	NA	5005317	5005997	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5005300_5006000
WTC11_00055386	chr2	+	296	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTCATGTCCGACTAAT	NA	False	NA	NA	False	CATAAA	-19	NA	12572927	12573223	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12572900_12573200
WTC11_00055387	chr2	+	257	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACATCAGTCCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	12627777	12628034	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12627800_12628000
WTC11_00055388	chr2	+	291	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCCCAAACCCAACAAC	NA	False	NA	NA	False	AATAAA	-19	NA	12628293	12628584	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12628300_12628600
WTC11_00055389	chr2	+	1246	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACTTCTATCCTAG	NA	False	NA	NA	False	NA	NA	NA	20273728	20274974	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_20273700_20275000
WTC11_00055391	chr2	+	1919	1	Antisense	novelGene_ENSG00000115904.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTATGTAGTAGTATGT	NA	False	NA	NA	False	NA	NA	NA	39051388	39053307	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_39051400_39053300
WTC11_00055392	chr2	+	6889	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATACCCAGATTGAAA	NA	False	NA	NA	False	NA	NA	NA	42426274	42433163	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_42426300_42433200
WTC11_00055393	chr2	+	302	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGGCCAAAAATCTACAT	NA	False	NA	NA	False	NA	NA	NA	51868262	51868564	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_51868300_51868600
WTC11_00055394	chr2	+	267	1	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATTCTTGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	55434888	55435155	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_55434900_55435200
WTC11_00055395	chr2	+	215	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAATAAATAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	58318374	58318589	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_58318400_58318600
WTC11_00055397	chr2	+	209	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAAAGCGGTCCACCCTC	61889143	False	NA	NA	False	NA	NA	NA	61889230	61889439	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_61889200_61889400
WTC11_00055398	chr2	+	230	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTAGGATTCCTCCAT	66246757	False	NA	NA	False	TATAAA	-2	NA	66246768	66246998	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66246800_66247000
WTC11_00055399	chr2	+	349	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATCTATTTTCTTCCTC	66247297	False	NA	NA	False	NA	NA	NA	66247308	66247657	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66247300_66247700
WTC11_00055400	chr2	+	6718	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATTTCTACTTTTAAA	69906730	False	NA	NA	False	NA	NA	NA	69906740	69913458	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_69906700_69913500
WTC11_00055401	chr2	+	402	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTAAGGCTTGTCTGG	NA	False	NA	NA	False	AAAACA	-31	NA	75215974	75216376	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_75216000_75216400
WTC11_00055403	chr2	+	643	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTCACAGAAGGGAAGAA	153535234	False	NA	NA	False	NA	NA	NA	153535249	153535892	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_153535200_153535900
WTC11_00055405	chr2	+	419	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGAAATTAACCACACTT	NA	False	NA	NA	False	NA	NA	NA	183529929	183530348	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_183529900_183530300
WTC11_00055406	chr2	+	18665	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAAGTGGTGAGTGAAA	NA	False	NA	NA	False	NA	NA	NA	187636293	187654958	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187636300_187655000
WTC11_00055409	chr2	+	5053	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGCATATGCCAGAATT	NA	False	NA	NA	False	ATTAAA	-9	NA	202485574	202490627	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_202485600_202490600
WTC11_00055413	chr2	+	2931	13	NNC	ENSG00000172554.12	novel	1907	17	NA	NA	9	-6877	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	30.966267489354	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAAATCCTAATGT	947207	True	NA	-18	True	NA	NA	NA	950857	1249727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1247940
WTC11_00055414	chr2	+	1473	5	ISM	ENSG00000172554.12	ENST00000452177.5	1818	8	30	57218	30	-57218	5prime_fragment	FALSE	canonical	3	17	junction_4	44.0645832840843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAAACACTTTGTAT	947247	True	NA	34	True	NA	NA	NA	950897	1104453	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1103404
WTC11_00055415	chr2	+	1679	14	NIC	ENSG00000172554.12	novel	1907	17	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	27.1260480941677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGTCCTCCTTGTTAAA	947267	True	NA	12	True	AATAAA	-21	NA	950917	1367613	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_951069_1083517_1083656_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
WTC11_00055416	chr2	+	315	2	FSM	ENSG00000172554.12	ENST00000489646.1	319	2	0	4	0	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATGATGAATTTTTTG	NA	False	NA	17	True	AATAAA	-19	NA	1247324	1256600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_1247444_1256404
WTC11_00055417	chr2	+	2392	11	NIC	ENSG00000171853.16	novel	2499	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	42.6568869000071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	3375589	True	NA	12	True	AATAAA	-13	NA	3379686	3479565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_3379877_3387619_3388671_3401776_3401894_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
WTC11_00055418	chr2	+	2684	13	NNC	ENSG00000171853.16	novel	2483	12	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	51.8804046715992	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTGTCTGCTGCGTGT	3375636	True	NA	10	True	AATAAA	-11	NA	3379733	3479563	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_3379840_3380818_3381083_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
WTC11_00055419	chr2	+	751	3	NNC	ENSG00000234171.4	novel	4344	3	NA	NA	232	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	57	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	3557251	False	NA	NA	False	AATAAA	-39	NA	3558699	3561734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_3558751_3559447_3559730_3561316
WTC11_00055421	chr2	+	1642	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTCAGGATCTGCGCCT	5002453	False	NA	NA	False	NA	NA	NA	5002466	5004108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5002500_5004100
WTC11_00055422	chr2	+	1230	2	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACGGCCATTTCGCTC	5002681	False	NA	NA	False	NA	NA	NA	5002694	5006667	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5003531_5006273
WTC11_00055423	chr2	+	285	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCGATGGCTTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	7872834	7873119	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_7872800_7873100
WTC11_00055424	chr2	+	1840	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	197	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGTTTTTTAAAAATAA	7875317	False	NA	-25	True	NA	NA	NA	7875327	7892305	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876007_7883431_7883560_7891272
WTC11_00055425	chr2	+	2955	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	183.714149941938	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGTTTTTTAAAAATAA	7871505	True	NA	-25	True	NA	NA	NA	7876645	7892305	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7877316_7877357_7878482_7883431_7883560_7891272
WTC11_00055426	chr2	+	1261	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	220.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGAGTCATCTTCCCTT	7871512	True	NA	15	True	AATAAA	-16	NA	7876652	7892269	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876789_7883431_7883560_7891272
WTC11_00055427	chr2	+	1532	4	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	168.729237405838	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871548	True	NA	14	True	AATAAA	-15	NA	7876688	7892268	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876785_7878169_7878482_7883431_7883560_7891272
WTC11_00055428	chr2	+	1399	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	105	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871553	True	NA	14	True	AATAAA	-15	NA	7876693	7892268	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7876785_7878169_7878482_7891272
WTC11_00055429	chr2	+	3243	27	NIC	ENSG00000151693.11	novel	5665	28	NA	NA	5	-2388	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	19.5826272481715	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCGGTGTCATTTGTG	9204363	True	NA	NA	False	NA	NA	NA	9206769	9403289	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_9207231_9279316_9279390_9297299_9297446_9320287_9320338_9323120_9323251_9327825_9327912_9334737_9334814_9335092_9335180_9344531_9344636_9344730_9344801_9350807_9350896_9356046_9356096_9356178_9356346_9358755_9358890_9368424_9368520_9374754_9374945_9376907_9376994_9378943_9379060_9380740_9380809_9385244_9385359_9388293_9388547_9391061_9391197_9393481_9393648_9400022_9400073_9400741_9400831_9401273_9401397_9403252
WTC11_00055430	chr2	+	850	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGAAGTTTTATACT	9473332	True	NA	5	True	AATAAA	-15	NA	9473790	9488457	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
WTC11_00055431	chr2	+	446	4	FSM	ENSG00000134330.19	ENST00000495494.5	758	4	312	0	312	0	multi-exon	FALSE	canonical	3	97	junction_1	19.8158185969358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTACTTGACCTGTGGACC	9475972	False	NA	NA	False	NA	NA	NA	9475985	9484512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9476040_9478221_9478371_9481285_9481448_9484431
WTC11_00055432	chr2	+	997	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	74	-194	74	194	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAATATCAGCGTCTTT	9555879	True	NA	NA	False	NA	NA	NA	9555972	9556969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9556000_9557000
WTC11_00055433	chr2	+	714	4	FSM	ENSG00000134317.18	ENST00000494520.1	780	4	66	0	66	0	multi-exon	FALSE	canonical	3	19	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGCAGCACACCGCTAAA	9960801	False	NA	NA	False	NA	NA	NA	9961029	9964307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9961437_9962454_9962532_9963885_9964043_9964234
WTC11_00055436	chr2	+	438	5	ISM	ENSG00000143882.12	ENST00000648362.1	1147	12	32882	6044	-24506	-6044	internal_fragment	FALSE	canonical	1	3	junction_1	1.08972473588517	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGAGACCCCAGCT	NA	False	NA	NA	False	NA	NA	NA	10753981	10772608	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_10754067_10764330_10764426_10768718_10768811_10771838_10771938_10772541
WTC11_00055437	chr2	+	2319	1	FSM	ENSG00000162975.5	ENST00000295082.3	2292	1	-102	75	-102	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGCGGCCTGGCTGGCA	10911799	False	NA	-72	True	NA	NA	NA	10911831	10914150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10911800_10914200
WTC11_00055439	chr2	+	8502	33	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	464	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_9	11.5720821781346	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGTTGGTGAGTA	11480487	True	NA	6	True	AATAAA	-15	NA	11482804	11642786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703_11580833_11585160_11585275_11585761_11585906_11588745_11588932_11592775_11593127_11595250_11595380_11596110_11596240_11597780_11597979_11598679_11598861_11600799_11600996_11602405_11602543_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
WTC11_00055440	chr2	+	8320	32	NNC	ENSG00000196208.14	novel	8555	33	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	13.2414541580826	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTGGTGAGTATT	NA	False	NA	8	True	AATAAA	-17	NA	11556475	11642788	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703_11580833_11585160_11585275_11585761_11585906_11588745_11588932_11592775_11593127_11595250_11595380_11596110_11596240_11597780_11597979_11598679_11598861_11600802_11600996_11602405_11602543_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
WTC11_00055442	chr2	+	3978	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	195.418781083088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711129	True	NA	77	True	AATAAA	-22	NA	12716909	12742734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_12717011_12717251_12717686_12717836_12718578_12723259_12723553_12740325
WTC11_00055444	chr2	+	2445	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	-22	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	297.418884833421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572068	True	NA	6	True	AATAAA	-14	NA	15591845	15631101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
WTC11_00055445	chr2	+	2504	26	FSM	ENSG00000079785.16	ENST00000676916.1	2504	26	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	292.662957000028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572068	True	NA	6	True	AATAAA	-14	NA	15591845	15631101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595146_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
WTC11_00055446	chr2	+	3045	3	NNC	ENSG00000134323.12	novel	2613	3	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	237.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	NA	False	NA	16	True	AATAAA	-16	NA	15940427	15947004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_15941054_15941947_15942855_15945492
WTC11_00055447	chr2	+	1709	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	-16	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15938881	True	NA	19	True	AATAAA	-19	NA	15940549	15947007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15940744_15945492
WTC11_00055449	chr2	+	425	3	FSM	ENSG00000170745.12	ENST00000481414.5	560	3	-29	164	-29	-164	multi-exon	TRUE	canonical	1	3	junction_2	48.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGCTCAGACACAAGTT	17877161	True	NA	NA	False	NA	NA	NA	17878637	17919471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17878807_17917679_17917872_17919407
WTC11_00055450	chr2	+	4730	13	ISM	ENSG00000119771.15	ENST00000486442.6	5325	14	90379	-5	-57027	0	3prime_fragment	FALSE	canonical	2	9	junction_10	7.8541390362025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAACGTAATCTTTGTG	NA	False	NA	10	True	AATAAA	-24	NA	23475557	23708611	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_23475668_23562151_23562482_23639138_23639281_23642337_23642851_23684398_23684538_23691673_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332_23696514_23703185_23703380_23703718_23703864_23706480
WTC11_00055452	chr2	+	1004	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_3	293.666796727175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGGCTCTGTGCTTG	24044784	True	NA	-6	True	NA	NA	NA	24049770	24063656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063018
WTC11_00055454	chr2	+	7066	22	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	28	-123	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	20.8268969649396	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAACCTCATGGGTTGC	24491094	False	NA	-1	True	AATAGA	-7	NA	24491281	24770579	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768078_24768136_24768220
WTC11_00055457	chr2	+	2963	1	Genic_Genomic	ENSG00000084710.14	novel	NA	NA	NA	NA	34629	129	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGTGGGGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	25156301	25159264	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_25156300_25159300
WTC11_00055458	chr2	+	4904	6	FSM	ENSG00000157833.13	ENST00000407684.1	5138	6	234	0	234	0	multi-exon	FALSE	canonical	1	5	junction_1	45.4066074486963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAGTACAAGTGGCAT	26180866	False	NA	23	True	AATAAA	-14	NA	26180949	26189644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26182494_26182966_26183098_26184232_26185277_26186188_26186359_26187230_26187316_26187714
WTC11_00055459	chr2	+	349	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	321	0	-321	multi-exon	FALSE	canonical	3	493	junction_1	13.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAATAATGATACTACAT	26242103	True	NA	NA	False	ATTAAA	-14	NA	26244919	26254635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26244991_26254246_26254319_26254429
WTC11_00055460	chr2	+	1594	14	FSM	ENSG00000138029.14	ENST00000405867.7	1588	14	-6	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	140.256147752063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAGATACATAAATATGG	26242103	True	NA	-39	True	TATAAA	-5	NA	26244919	26290412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
WTC11_00055461	chr2	+	9305	4	NNC	ENSG00000138018.19	novel	8066	10	NA	NA	35018	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	39.1350936571711	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	26381181	False	NA	24	True	AATAAA	-31	NA	26381195	26395885	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_26383348_26385050_26385140_26386353_26386537_26389004
WTC11_00055462	chr2	+	1407	1	ISM	ENSG00000213699.9	ENST00000344420.10	3902	6	15485	56	15444	28	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACCTGAGACTGG	26779757	False	NA	-36	True	AAGAAA	-43	NA	26779768	26781175	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_26779800_26781200
WTC11_00055463	chr2	+	2591	12	ISM	ENSG00000084693.16	ENST00000360131.5	3188	15	12	2783	-1	0	5prime_fragment	FALSE	canonical	3	82	junction_11	77.7923704007146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGAACATTTACTATG	27045578	True	NA	2	True	AATAAA	-14	NA	27051679	27067835	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493
WTC11_00055465	chr2	+	218	1	FSM	ENSG00000143994.14	ENST00000622011.1	3107	1	-10	2899	5	-2899	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGCGGGTCCACCGCT	27123814	True	NA	NA	False	NA	NA	NA	27123844	27124062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27123800_27124100
WTC11_00055466	chr2	+	7247	45	NNC	ENSG00000084774.14	novel	7286	44	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_27	124.79353817174	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGAGTGTAGTAGAAC	27206843	True	NA	29	True	AATAAA	-18	NA	27217368	27243784	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27217634_27217876_27218017_27221217_27221348_27222193_27222337_27222518_27222661_27222865_27223038_27223562_27223749_27223916_27224030_27224344_27224491_27224744_27224877_27225009_27225244_27225704_27225927_27226130_27226320_27226524_27226650_27226831_27226963_27231467_27231581_27231979_27232225_27232447_27232695_27233041_27233141_27233311_27233537_27233625_27233809_27234007_27234227_27234517_27234686_27235244_27235428_27235535_27235641_27236283_27236524_27236748_27236831_27237046_27237167_27237378_27237546_27237717_27237883_27238055_27238188_27238430_27238633_27239041_27239233_27239330_27239472_27239696_27239799_27240264_27240362_27240910_27240956_27241057_27241228_27241321_27241397_27241910_27242124_27242301_27242428_27242619_27242776_27242871_27242974_27243197_27243293_27243415
WTC11_00055467	chr2	+	399	3	FSM	ENSG00000234072.1	ENST00000412749.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	9.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGTCTTTAAA	27356141	True	NA	NA	False	NA	NA	NA	27357187	27367622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27357293_27357807_27357903_27367423
WTC11_00055468	chr2	+	711	2	NNC	ENSG00000234072.1	novel	3060	2	NA	NA	2352	42	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	27358493	False	NA	NA	False	AATAAA	-40	NA	27359539	27360298	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27359566_27359613
WTC11_00055469	chr2	+	2174	18	NNC	ENSG00000115216.14	novel	2176	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_10	299.055178855007	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	27410616	True	NA	25	True	AATAAA	-16	NA	27428630	27442255	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439768_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
WTC11_00055470	chr2	+	1690	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	209.5145905095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGTTCTAAGACTGC	27619291	True	NA	25	True	GATAAA	-14	NA	27629029	27650843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
WTC11_00055471	chr2	+	381	5	FSM	ENSG00000163803.13	ENST00000481449.1	562	5	181	0	181	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCATGCAGGTACCTG	NA	False	NA	NA	False	NA	NA	NA	28585760	28591158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28585843_28589449_28589555_28589674_28589771_28590004_28590077_28591132
WTC11_00055472	chr2	+	470	6	FSM	ENSG00000163803.13	ENST00000473272.1	677	6	207	0	207	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCTGCAGCCCTTCT	NA	False	NA	NA	False	AAGAAA	-19	NA	28620878	28630664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28620979_28625056_28625109_28626427_28626509_28628562_28628629_28629093_28629186_28630585
WTC11_00055473	chr2	+	1744	6	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	0	-1447	intron_retention	FALSE	non_canonical	0	0	junction_1	186.44741886119	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTCTTTTTCTTTTTT	28732781	True	NA	NA	False	NA	NA	NA	28751829	28800201	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_28752174_28781804_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
WTC11_00055477	chr2	+	2400	1	FSM	ENSG00000229816.1	ENST00000438163.1	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTGATAGTTAATCTAC	32201586	False	NA	NA	False	AATAGA	-39	NA	32201599	32203999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32201600_32204000
WTC11_00055478	chr2	+	508	4	FSM	ENSG00000115760.15	ENST00000431454.2	508	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5521135891752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACGTGTTTGCTTCTTTG	32436063	False	NA	NA	False	AAAACA	-21	NA	32436074	32442380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32436185_32439507_32439687_32442064_32442227_32442323
WTC11_00055479	chr2	+	213	1	FSM	ENSG00000274159.1	ENST00000614487.1	366	1	71	82	71	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCTTCTAGTATAAAGT	32548728	False	NA	NA	False	NA	NA	NA	32548745	32548958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32548700_32549000
WTC11_00055480	chr2	+	2716	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	38.4040008846815	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	32623613	True	NA	5	True	AATAAA	-18	NA	32628098	32821051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
WTC11_00055482	chr2	+	438	1	FSM	ENSG00000238038.1	ENST00000420036.1	246	1	-346	154	-346	-154	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTAAGTAGGGAGTTATC	33601212	False	NA	NA	False	NA	NA	NA	33601694	33602132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_33601700_33602100
WTC11_00055483	chr2	+	537	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGATTTTGTGGTAAGG	NA	False	NA	NA	False	NA	NA	NA	35436958	35437495	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_35437000_35437500
WTC11_00055484	chr2	+	342	3	FSM	ENSG00000150938.10	ENST00000473403.5	386	3	0	44	0	-33	multi-exon	FALSE	canonical	1	1	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTTGTAGTCAACTT	NA	False	NA	NA	False	NA	NA	NA	36369114	36379180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_36369250_36378356_36378526_36379142
WTC11_00055485	chr2	+	1921	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	98.0349905645938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228321	True	NA	13	True	AATAAA	-25	NA	37231707	37249160	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
WTC11_00055486	chr2	+	834	7	FSM	ENSG00000143891.17	ENST00000444351.5	834	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	69.9468051847656	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCAACTTCCTGGATGGC	38664742	False	NA	NA	False	NA	NA	NA	38666242	38731802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38698365_38698437_38729555_38729698_38731734
WTC11_00055487	chr2	+	594	4	FSM	ENSG00000214694.12	ENST00000433605.2	594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTCATTTAACAAT	38960421	True	NA	NA	False	NA	NA	NA	38960504	38973253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38960640_38966005_38966146_38971869_38971945_38973009
WTC11_00055488	chr2	+	1953	6	Fusion	ENSG00000231312.8_ENSG00000152154.11	novel	1664	4	NA	NA	-18243	0	intron_retention	FALSE	canonical	1	2	junction_1	33.8431677004384	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	NA	False	NA	19	True	ATTAAA	-19	NA	39646738	39717963	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_39646793_39665086_39665349_39665943_39666375_39704080_39704195_39707048_39707187_39717009
WTC11_00055489	chr2	+	373	1	FSM	ENSG00000236090.2	ENST00000448312.2	1008	1	187	448	187	-448	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCTTGGGGAACATGGA	NA	False	NA	NA	False	NA	NA	NA	41819933	41820306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_41819900_41820300
WTC11_00055490	chr2	+	487	2	FSM	ENSG00000162878.13	ENST00000475868.1	725	2	0	238	0	-238	multi-exon	FALSE	canonical	3	137	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCCCCAAGCTGAT	42054627	False	NA	NA	False	NA	NA	NA	42054641	42055393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42055021_42055285
WTC11_00055492	chr2	+	5435	17	FSM	ENSG00000057935.14	ENST00000406652.5	5484	17	48	1	-18	0	multi-exon	FALSE	canonical	3	38	junction_14	577.733201697592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	NA	False	NA	8	True	AATAAA	-15	NA	42568092	42756946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568227_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
WTC11_00055496	chr2	+	2782	1	FSM	ENSG00000279873.2	ENST00000623515.2	1646	1	-464	-672	-464	672	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTTTTCAGATCA	43226728	False	NA	NA	False	NA	NA	NA	43226745	43229527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43226700_43229500
WTC11_00055497	chr2	+	6167	16	ISM	ENSG00000152527.14	ENST00000282406.9	6994	30	73361	7	18391	-7	3prime_fragment	FALSE	canonical	2	14	junction_7	3.45768066130398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCATTTTGAGCATTAT	NA	False	NA	2	True	AATAAA	-10	NA	43710620	43767980	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
WTC11_00055498	chr2	+	632	6	FSM	ENSG00000152527.14	ENST00000490038.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.41350119714026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGCTCCAGCACTG	NA	False	NA	NA	False	CATAAA	-33	NA	43745898	43765482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43745964_43753618_43753761_43758899_43759030_43762303_43762391_43764227_43764366_43765412
WTC11_00055499	chr2	+	1094	6	FSM	ENSG00000138036.18	ENST00000398823.6	2903	6	-18	1827	-3	-1823	multi-exon	FALSE	canonical	1	2	junction_5	30.2720993655874	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTACTTGGGAGGCTGA	43773339	True	NA	NA	False	AATACA	-37	NA	43774045	43793356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43792675
WTC11_00055502	chr2	+	2713	3	Fusion	ENSG00000138083.5_ENSG00000277311.1	novel	2713	2	NA	NA	-73	0	multi-exon	FALSE	canonical	3	12	junction_1	29	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGAGACTGGTGTTTT	NA	False	NA	40	True	AATACA	-22	NA	44933981	44946071	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_44934377_44942096_44942911_44944567
WTC11_00055503	chr2	+	217	1	FSM	ENSG00000277311.1	ENST00000616963.1	217	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGGAGCCAGAGAGCGC	NA	False	NA	NA	False	NA	NA	NA	44934054	44934271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44934100_44934300
WTC11_00055504	chr2	+	443	1	FSM	ENSG00000231848.1	ENST00000423051.1	461	1	41	-23	41	23	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTGTTTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	44996453	44996896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44996500_44996900
WTC11_00055505	chr2	+	4463	1	ISM	ENSG00000119878.6	ENST00000238892.4	6323	5	8190	309	8190	-309	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTAGCATCCTTTGACG	46619660	False	NA	-47	True	NA	NA	NA	46625404	46629867	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_46625400_46629900
WTC11_00055506	chr2	+	626	1	FSM	ENSG00000171150.9	ENST00000568862.1	2463	1	1839	-2	1839	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCTCAGGGTCTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	46779621	46780247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46779600_46780200
WTC11_00055507	chr2	+	3033	21	FSM	ENSG00000068724.17	ENST00000409245.5	3033	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	25.9524083660843	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCTGCAGCCCTCGT	46916097	True	NA	1	True	AATACA	-16	NA	46916156	47074048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46916578_46917183_46917278_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
WTC11_00055508	chr2	+	5019	19	NIC	ENSG00000068724.17	novel	5095	20	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	21.4683229174728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAAGCTCTGTTTCTTC	46940559	True	NA	31	True	ATTAAA	-28	NA	46941194	47076136	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
WTC11_00055510	chr2	+	3181	17	NNC	ENSG00000095002.15	novel	3018	17	NA	NA	0	7740	intron_retention	FALSE	non_canonical	0	0	junction_16	498.046245342739	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTGAGATAATCTTT	47378656	True	NA	NA	False	AAAAAG	-2	NA	47403118	47574896	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778_47483222_47574865
WTC11_00055512	chr2	+	428	2	FSM	ENSG00000233230.2	ENST00000417692.2	1041	2	17	596	10	-55	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAACTACAAAGCGTGA	47906710	True	NA	NA	False	NA	NA	NA	47906827	47907580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47906993_47907317
WTC11_00055513	chr2	+	3165	22	NNC	ENSG00000162869.16	novel	3173	22	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	28.9661621336489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	48437540	True	NA	27	True	AATAAA	-18	NA	48440810	48515386	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459716_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
WTC11_00055514	chr2	+	1266	5	FSM	ENSG00000170634.13	ENST00000458030.3	1330	5	0	64	0	-64	multi-exon	FALSE	canonical	2	5	junction_4	26.2392835268039	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTGTATTAGCATT	NA	False	NA	NA	False	NA	NA	NA	53970837	54080400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54079931
WTC11_00055515	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	-156	156	-55	-107	multi-exon	FALSE	canonical	2	15	junction_1	6.18241233033047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATACTGTTGTCTA	NA	False	NA	3	True	AATAAA	-20	NA	54115347	54305144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
WTC11_00055517	chr2	+	2314	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	-167	7	-167	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGCTGTTTTTCTTA	55282093	False	NA	-3	True	AATAAA	-7	NA	55282151	55284465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55282200_55284500
WTC11_00055518	chr2	+	569	2	FSM	ENSG00000162997.15	ENST00000295112.13	541	2	0	-28	0	-7	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGCTGTTTTTCTTA	55282303	False	NA	-3	True	AATAAA	-7	NA	55282328	55284465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55282435_55284002
WTC11_00055519	chr2	+	772	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	-13	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	14.0769314838142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	55516935	True	NA	NA	False	AATATA	-7	NA	55519717	55535914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
WTC11_00055520	chr2	+	1413	14	NIC	ENSG00000028116.18	novel	1870	14	NA	NA	0	-411	combination_of_known_junctions	TRUE	canonical	3	34	junction_12	70.3214091988775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGAGTCTCAAGAACCT	58046616	False	NA	NA	False	NA	NA	NA	58046711	58159373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
WTC11_00055521	chr2	+	802	3	ISM	ENSG00000233723.10	ENST00000687108.1	1112	6	310235	15	-1059	-11	3prime_fragment	FALSE	canonical	3	14	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCACATTGAATCTCA	NA	False	NA	-10	True	AATAAA	-2	NA	58924549	58931061	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_58924627_58925610_58925910_58930635
WTC11_00055522	chr2	+	3415	3	NIC	ENSG00000162928.9	novel	4472	4	NA	NA	16	-336	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACTTTACAGAAATTACT	61014058	True	NA	-66	True	ATTAAA	-45	NA	61017745	61051654	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61017852_61045725_61045852_61048471
WTC11_00055523	chr2	+	880	6	NIC	ENSG00000162929.14	novel	2640	11	NA	NA	39	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	31.0393298896738	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTCTCTGTTCTCT	61063816	True	NA	NA	False	ATTAAA	-35	NA	61065918	61075176	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61074982
WTC11_00055525	chr2	+	940	5	NNC	ENSG00000237651.8	novel	879	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.3737954907851	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144265	True	NA	-11	True	AATAAA	-2	NA	61145129	61164809	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61145197_61148737_61148860_61162841_61162956_61163051_61163233_61164353
WTC11_00055529	chr2	+	893	4	FSM	ENSG00000014641.21	ENST00000485781.5	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	4644	junction_3	189.996491195671	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTTTTTTCTAGTTC	63588561	False	NA	NA	False	NA	NA	NA	63588608	63597657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398
WTC11_00055530	chr2	+	936	3	FSM	ENSG00000014641.21	ENST00000472098.5	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2536.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAATCTTGGCTCACTG	63563951	True	NA	NA	False	NA	NA	NA	63588997	63598186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589047_63594487_63594587_63597398
WTC11_00055533	chr2	+	2299	12	FSM	ENSG00000169764.16	ENST00000676780.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1668.37172067471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAATGATGATCACTTT	63840964	True	NA	-44	True	NA	NA	NA	63841097	63891502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63856305_63856434_63857549_63857719_63857828_63857937_63859179_63859392_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
WTC11_00055535	chr2	+	4388	5	NNC	ENSG00000225889.10	novel	1619	5	NA	NA	0	2	intron_retention	FALSE	canonical	2	22	junction_3	14.0178457688762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	64227927	True	NA	14	True	ATTAAA	-23	NA	64228400	64257612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419_64253044_64254979
WTC11_00055539	chr2	+	405	3	FSM	ENSG00000143995.20	ENST00000498705.5	532	3	127	0	-63	0	multi-exon	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGATTCTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	66442901	66512294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_66443049_66464108_66464221_66512148
WTC11_00055540	chr2	+	2946	6	FSM	ENSG00000143971.9	ENST00000644028.1	2946	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.9713458036286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394886	True	NA	NA	False	NA	NA	NA	67397323	67412089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
WTC11_00055541	chr2	+	2519	10	FSM	ENSG00000163219.12	ENST00000409220.5	2939	10	420	0	281	0	multi-exon	TRUE	canonical	1	2	junction_5	2.14878662286819	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATTGCTAATCCATACG	NA	False	NA	NA	False	AATAAA	-20	NA	68775220	68826833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_68775421_68782232_68782321_68787839_68787957_68807272_68807481_68813286_68813420_68816288_68816363_68817872_68817995_68819122_68819320_68822339_68822873_68825986
WTC11_00055543	chr2	+	1809	13	NNC	ENSG00000169604.21	novel	2221	13	NA	NA	95	-4107	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	28.8468176561798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTACCACATGCAAAATT	69013578	True	NA	NA	False	AATAAA	-10	NA	69013594	69131062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69130109
WTC11_00055546	chr2	+	279	2	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAATTACACTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	71086370	71090838	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_71086567_71090755
WTC11_00055547	chr2	+	606	5	FSM	ENSG00000075292.19	ENST00000475743.1	590	5	-16	0	-14	0	multi-exon	FALSE	canonical	2	36	junction_1	163.121886943475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGACATTCACCAGCACA	71320279	True	NA	NA	False	AATAAA	-25	NA	71331745	71365514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428
WTC11_00055548	chr2	+	731	2	FSM	ENSG00000075292.19	ENST00000454122.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCTCCCAAGATTTTAC	71320315	True	NA	NA	False	NA	NA	NA	71331781	71349063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71331876_71348426
WTC11_00055549	chr2	+	2290	6	ISM	ENSG00000075292.19	ENST00000264447.9	6487	28	0	69356	0	0	5prime_fragment	FALSE	canonical	3	119	junction_1	115.471901344007	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTCTTTAATTAATAA	71320315	True	NA	NA	False	GATAAA	-21	NA	71331781	71365705	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428
WTC11_00055550	chr2	+	4949	27	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	36	junction_1	116.477878388328	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCATCTGTGTTTGT	71320315	True	NA	NA	False	AATAAA	-19	NA	71331781	71435052	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
WTC11_00055551	chr2	+	1802	11	NNC	ENSG00000075292.19	novel	6821	28	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	196.097450263893	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	71320329	True	NA	6	True	AATAAA	-2	NA	71331795	71395670	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365432_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71393393_71393646_71395246
WTC11_00055556	chr2	+	846	6	FSM	ENSG00000075292.19	ENST00000461991.3	846	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	264.22339033477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTGATTTTTTAAAGA	71427254	False	NA	NA	False	AATAAA	-36	NA	71427282	71435069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71433475_71433536_71434741
WTC11_00055561	chr2	+	11346	16	ISM	ENSG00000116127.20	ENST00000682859.1	12427	21	28835	32	-1499	0	3prime_fragment	FALSE	canonical	3	23	junction_10	27.6019322995088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATACTTTTAGAAAATA	NA	False	NA	21	True	NA	NA	NA	73447957	73609881	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
WTC11_00055563	chr2	+	6874	16	FSM	ENSG00000116127.20	ENST00000684590.1	6874	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.7234257349158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTCATAGTAAACAATTC	73452400	False	NA	53	True	AATAAA	-11	NA	73452410	73609913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73454068_73455212_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
WTC11_00055565	chr2	+	655	1	FSM	ENSG00000284902.1	ENST00000643055.1	1506	1	921	-70	921	70	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATAGGGAAAGACTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	73470445	73471100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73470400_73471100
WTC11_00055567	chr2	+	2324	10	FSM	ENSG00000065911.13	ENST00000678228.1	2320	10	-4	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	536.79124387994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATGAATTTCTGAAAT	74181811	True	NA	24	True	AATAAA	-16	NA	74198612	74215279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74205981_74206089_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
WTC11_00055569	chr2	+	883	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	221.985782202374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	74412714	True	NA	-23	True	NA	NA	NA	74421719	74425704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
WTC11_00055570	chr2	+	2363	6	FSM	ENSG00000005448.17	ENST00000468778.5	2356	6	-7	0	0	0	multi-exon	FALSE	canonical	3	635	junction_3	51.6162765026692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412753	True	NA	28	True	CATAAA	-17	NA	74421758	74425755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74422933_74423318_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
WTC11_00055571	chr2	+	2895	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_12	46.3203668906982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480016	True	NA	29	True	AATAAA	-18	NA	74483092	74494559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492924
WTC11_00055573	chr2	+	356	1	FSM	ENSG00000271452.1	ENST00000604219.1	466	1	150	-40	150	40	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCCCCAAATCTATCTC	75670128	False	NA	NA	False	NA	NA	NA	75670138	75670494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75670100_75670500
WTC11_00055574	chr2	+	657	1	FSM	ENSG00000270996.1	ENST00000603612.1	899	1	0	242	0	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGAGTTCTTCTTTTC	75718964	False	NA	NA	False	CATAAA	-32	NA	75719119	75719776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75719100_75719800
WTC11_00055576	chr2	+	9396	2	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTATGTATTTTTTGTG	77088193	True	NA	10	True	AATAAA	-22	NA	77088578	77099884	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732
WTC11_00055577	chr2	+	781	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	75	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTAATGCCCAATTAC	77088570	False	NA	4	True	AATAAA	-10	NA	77088658	77150793	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090920_77150363
WTC11_00055580	chr2	+	590	3	FSM	ENSG00000115459.18	ENST00000462396.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	6	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGGATGGCACAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	85354393	85357025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85355171_85356966
WTC11_00055581	chr2	+	4761	12	FSM	ENSG00000115459.18	ENST00000446464.7	4761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	19.6905817147301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354290	True	NA	5	True	AATAAA	-14	NA	85354745	85391748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85387097_85387226_85389750_85389828_85390137
WTC11_00055582	chr2	+	2210	12	NIC	ENSG00000115459.18	novel	2332	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.2521506409278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354328	True	NA	5	True	AATAAA	-14	NA	85354783	85391748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_85354830_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
WTC11_00055585	chr2	+	3591	7	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	13	1	13	-1	intron_retention	FALSE	canonical	3	305	junction_5	24.4040069569642	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509776	True	NA	NA	False	AATAAA	-20	NA	85539180	85545280	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564
WTC11_00055590	chr2	+	446	3	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	3349	64576	3349	-64576	internal_fragment	FALSE	canonical	3	22	junction_1	55.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGAATGCCGCCTTATC	NA	False	NA	NA	False	NA	NA	NA	87128546	87132053	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87128816_87130102_87130195_87131968
WTC11_00055591	chr2	+	737	5	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	21372	34935	21372	-34935	internal_fragment	FALSE	canonical	3	125	junction_2	168.750370369964	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTCAAACAGGAATGCA	NA	False	NA	NA	False	NA	NA	NA	87146569	87161694	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87146630_87149834_87150107_87156279_87156515_87159562_87159655_87161616
WTC11_00055592	chr2	+	338	5	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	36730	25461	36730	-25461	internal_fragment	FALSE	canonical	3	151	junction_4	80.4965061353597	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTTTGTCTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	87161927	87171168	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87162009_87162949_87163029_87164583_87164659_87170570_87170648_87171142
WTC11_00055593	chr2	+	1455	10	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	51952	-334	51952	334	3prime_fragment	FALSE	canonical	3	293	junction_1	76.9732998440946	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAGCCCAAAAATGCCAA	NA	False	NA	NA	False	TTTAAA	-32	NA	87177149	87196963	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87177235_87179988_87180107_87181065_87181144_87181501_87181570_87182958_87183098_87185531_87185619_87187146_87187243_87188859_87189059_87193442_87193578_87196513
WTC11_00055597	chr2	+	319	1	FSM	ENSG00000233158.1	ENST00000452670.1	400	1	94	-13	94	13	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGATGTTATCTGTGGC	NA	False	NA	NA	False	AGTAAA	-7	NA	94912525	94912844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_94912500_94912800
WTC11_00055598	chr2	+	1354	9	NNC	ENSG00000115042.10	novel	1366	9	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	148.173673437625	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGACAGAGCTCTCTTC	95397391	True	NA	-35	True	NA	NA	NA	95402720	95413085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_95402873_95405279_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
WTC11_00055600	chr2	+	1319	7	NIC	ENSG00000231584.9	novel	1662	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	29.191418069167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010588	True	NA	13	True	AGTAAA	-19	NA	96010624	96023380	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96010733_96015108_96015326_96019480_96019701_96021124_96021234_96021367_96021466_96022673_96022754_96022893
WTC11_00055602	chr2	+	2100	3	NIC	ENSG00000135976.21	novel	7623	76	NA	NA	2534	-789	intron_retention	FALSE	canonical	3	23	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCTAACTTCTGAATT	NA	False	NA	NA	False	GATAAA	-15	NA	97248133	97251331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_97249646_97250143_97250174_97250773
WTC11_00055603	chr2	+	5476	22	NIC	ENSG00000040933.16	novel	9996	26	NA	NA	15	-882	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	41.7040648491644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTGGTCTTGCCTGA	98441129	True	NA	NA	False	AATAAA	-15	NA	98444872	98590151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98552785_98552970_98554270_98554490_98555552_98555692_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
WTC11_00055604	chr2	+	977	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	63	-112	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	212.352537069845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGGTGTAAAGTTTG	98599577	True	NA	19	True	AATAAA	-19	NA	98608651	98618400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618145
WTC11_00055606	chr2	+	735	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	68	0	61	0	multi-exon	FALSE	canonical	2	3	junction_1	12.5521135891752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	99154254	False	NA	NA	False	TATAAA	-35	NA	99155141	99162275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
WTC11_00055607	chr2	+	661	5	FSM	ENSG00000115539.14	ENST00000416255.5	657	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	22	junction_1	476.869151340281	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGTTTCCTGATGT	100563240	False	NA	NA	False	GATAAA	-20	NA	100563253	100571632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_100563510_100566502_100566630_100568930_100569022_100569577_100569722_100571589
WTC11_00055608	chr2	+	1547	4	FSM	ENSG00000170485.17	ENST00000495559.1	3834	4	1946	341	1946	-341	multi-exon	FALSE	canonical	2	3	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGGCCCTTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	100990255	100996481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_100990447_100990779_100990873_100993346_100993528_100995399
WTC11_00055609	chr2	+	827	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6678.61446615239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	100847299	True	NA	NA	False	AATATA	-7	NA	101002282	101018306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
WTC11_00055611	chr2	+	4061	30	NIC	ENSG00000071054.17	novel	7135	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	62.3252563116775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	101697726	False	NA	25	True	AATAAA	-38	NA	101697743	101891496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101868028_101868038_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00055612	chr2	+	2737	18	NIC	ENSG00000071054.17	novel	3416	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	79.4473994121671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	NA	False	NA	25	True	AATAAA	-38	NA	101855976	101891496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859642_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00055613	chr2	+	2747	18	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	78.9266226612154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	101855938	True	NA	25	True	AATAAA	-38	NA	101855996	101891496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
WTC11_00055616	chr2	+	791	3	NNC	ENSG00000226508.1	novel	415	3	NA	NA	-215	88	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGCTTTTTTTTTTTTTT	105143684	True	NA	NA	False	NA	NA	NA	105143897	105145512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_105144176_105144488_105144740_105145250
WTC11_00055617	chr2	+	1039	5	NNC	ENSG00000135974.10	novel	4587	4	NA	NA	49	362	intron_retention	FALSE	canonical	3	14	junction_4	112.898184219234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	105333763	True	NA	NA	False	AATAAA	-16	NA	105337588	105349573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105349250
WTC11_00055618	chr2	+	536	4	ISM	ENSG00000235486.1	ENST00000447760.1	831	6	122	1716	122	-1716	5prime_fragment	TRUE	canonical	0	0	junction_3	52.085399958999	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCACTTACGGTAGGT	NA	False	NA	NA	False	NA	NA	NA	106369845	106376531	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_106369870_106370938_106371160_106372233_106372444_106376450
WTC11_00055619	chr2	+	2417	3	ISM	ENSG00000196862.10	ENST00000408999.4	7212	23	42994	12476	42994	-12476	internal_fragment	FALSE	canonical	3	27	junction_2	31	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGGCAACCAGTGCAGT	NA	False	NA	NA	False	AAAAAG	-32	NA	107869885	107880068	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_107869978_107870704_107872929_107879967
WTC11_00055620	chr2	+	2508	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	31	0	-31	multi-exon	FALSE	canonical	2	4	junction_3	5.42481072744215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAATAAATAAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	108288894	108309884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
WTC11_00055621	chr2	+	6910	23	NNC	ENSG00000135968.22	novel	6909	23	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	37.6607573560078	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTATGGCTGCTCTT	108446066	True	NA	2	True	ATTAAA	-14	NA	108449190	108509397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534_108475636_108475751_108475851_108481696_108481817_108482286_108482452_108483061_108483167_108484148_108484312_108485635_108485737_108485830_108485909_108486510_108486649_108487698_108487821_108489837_108490015_108492572_108492795_108495290_108495486_108496969_108497110_108499552_108499755_108507559
WTC11_00055622	chr2	+	3524	8	NIC	ENSG00000135968.22	novel	6839	22	NA	NA	3	-1	combination_of_known_junctions	TRUE	canonical	3	14	junction_7	56.6467752202819	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATTACTGTTTTTACT	108446091	True	NA	0	True	AATAAA	-16	NA	108449215	108475393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108474788
WTC11_00055625	chr2	+	11462	28	NIC	ENSG00000153201.16	novel	11708	29	NA	NA	-17	-16	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	122.698913278056	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATTATTTGTACATC	108708083	True	NA	15	True	ATTAAA	-21	NA	108719535	108785793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
WTC11_00055626	chr2	+	2225	14	NNC	ENSG00000163006.12	novel	2250	14	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	47.9457286878433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAACAGGGTTAAATAAT	108781533	True	NA	NA	False	AATAAA	-14	NA	108786793	108876572	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
WTC11_00055627	chr2	+	2530	11	NNC	ENSG00000163006.12	novel	2250	14	NA	NA	13	-20100	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	50.4245971724118	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAATCTTCCAACTTTG	108781540	True	NA	6	True	AGTAAA	-14	NA	108786800	108826680	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108825378
WTC11_00055628	chr2	+	2300	15	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	37	-16	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	39.1564757330985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTTATGTGAGAACA	108781564	True	NA	NA	False	AATAAA	-2	NA	108786824	108876560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804891_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
WTC11_00055631	chr2	+	4897	5	NIC	ENSG00000153094.24	novel	1197	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	3.63145976158349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGAGCGTTTGATTTG	111122198	True	NA	13	True	AATAAA	-14	NA	111122669	111168444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_111122924_111123732_111123870_111124049_111124140_111150043_111150148_111164132
WTC11_00055632	chr2	+	3211	18	FSM	ENSG00000153208.18	ENST00000409780.5	3189	18	-22	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.5339147164997	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGTTGAACTTACTTG	111897984	True	NA	NA	False	AATAAA	-15	NA	111898606	112029367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111898797_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
WTC11_00055633	chr2	+	2272	1	FSM	ENSG00000278962.1	ENST00000624058.1	2272	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTCTATCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	112188363	112190635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112188400_112190600
WTC11_00055634	chr2	+	4995	6	NIC	ENSG00000114999.8	novel	14267	7	NA	NA	12	147	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	47.1143290305614	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCATGTTCACACCACT	112478977	True	NA	NA	False	NA	NA	NA	112482167	112532558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_112482502_112494142_112494376_112501205_112501342_112502911_112503182_112520281_112520426_112528680
WTC11_00055637	chr2	+	3441	12	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-85	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_5	265.897047124299	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633509	True	NA	20	True	AATAAA	-23	NA	112645853	112663825	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112652888_112652948_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
WTC11_00055638	chr2	+	684	5	FSM	ENSG00000144136.11	ENST00000498224.5	692	5	8	0	8	0	multi-exon	FALSE	canonical	3	595	junction_3	50.9675141634355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGCATAAGGATTCCGG	112647612	False	NA	NA	False	AATAAA	-26	NA	112647630	112659292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203
WTC11_00055640	chr2	+	1245	3	NNC	ENSG00000189223.15	novel	2402	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	1.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTTCCCTGTCCTT	113234949	True	NA	2	True	AATAAA	-18	NA	113235531	113240825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_113235571_113238089_113238213_113239742
WTC11_00055641	chr2	+	2745	4	NNC	ENSG00000189223.15	novel	442	4	NA	NA	357	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	13.1402688962847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGCATGCGGCTGT	NA	False	NA	NA	False	AATACA	-27	NA	113255746	113267014	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_113256455_113259263_113259585_113263277_113263455_113265475
WTC11_00055642	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	91.0994572492675	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	113588428	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
WTC11_00055643	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000393167.7	2179	9	37	1	0	-1	multi-exon	FALSE	canonical	3	23	junction_6	55.6911123968627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAAATGTATGTGCTTT	113626867	True	NA	15	True	AGTAAA	-20	NA	113627265	113643395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030
WTC11_00055644	chr2	+	1892	7	ISM	ENSG00000144134.19	ENST00000376439.3	623	8	-65	-160	11	0	intron_retention	FALSE	canonical	3	18	junction_4	51.0144315093506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	113626923	True	NA	11	True	AGTAAA	-16	NA	113627321	113643391	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
WTC11_00055646	chr2	+	2758	26	FSM	ENSG00000175497.17	ENST00000393147.6	2758	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.13030213535226	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTGTATTTATACAGAA	115161310	False	NA	NA	False	AAGAAA	-39	NA	115161601	115842345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_115162029_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
WTC11_00055647	chr2	+	683	2	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACACAAAGCCTGTTTGG	117277249	True	NA	15	True	GATAAA	-12	NA	117279110	117284463	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117284021
WTC11_00055648	chr2	+	689	2	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	117277250	True	NA	19	True	GATAAA	-16	NA	117279111	117284467	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117284018
WTC11_00055649	chr2	+	2236	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	-739	3	-739	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACTTCCCAAATGTGT	NA	False	NA	-1	True	AATAAA	-16	NA	118013434	118015670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_118013400_118015700
WTC11_00055650	chr2	+	4161	6	NIC	ENSG00000115107.20	novel	4259	6	NA	NA	6878	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	79.1691859248281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	119228428	False	NA	15	True	AATAAA	-19	NA	119230730	119265652	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119231035_119239362_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
WTC11_00055651	chr2	+	1814	5	NNC	ENSG00000115107.20	novel	3915	6	NA	NA	20569	-116	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	74.8164420431766	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTCTCTGAGATTTCA	NA	False	NA	14	True	NA	NA	NA	119244421	119263582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_119244517_119245488_119245989_119247678_119248207_119254683_119254849_119263056
WTC11_00055652	chr2	+	3100	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	26.4908739002699	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGATATGTGTTGGAAA	119757843	True	NA	8	True	AATAAA	-17	NA	119759922	119977083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
WTC11_00055653	chr2	+	3204	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	24.4752936652454	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGATATGTGTTGGAAA	119757843	True	NA	8	True	AATAAA	-17	NA	119759922	119977083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
WTC11_00055654	chr2	+	5094	27	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	26.6525973733436	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTCTTTTGCAGTGGT	119757843	True	NA	7	True	AGTAAA	-14	NA	119759922	119977456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119916691_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
WTC11_00055655	chr2	+	3167	24	FSM	ENSG00000115109.14	ENST00000443902.6	3167	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_23	100.152851046682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATGAAACAAAAC	120009814	True	NA	NA	False	AATAAA	-20	NA	120013076	120175861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120174840
WTC11_00055656	chr2	+	695	1	FSM	ENSG00000236878.1	ENST00000445926.1	662	1	-41	8	-41	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTATATGACAACACATAA	NA	False	NA	NA	False	NA	NA	NA	120211012	120211707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120211000_120211700
WTC11_00055657	chr2	+	6696	13	NIC	ENSG00000074047.22	novel	7136	14	NA	NA	155	-150	intron_retention	FALSE	canonical	2	4	junction_4	50.7474684645013	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTATCTGCTTCCCC	120735974	False	NA	33	True	ATTAAA	-23	NA	120736022	120992503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_120736286_120797290_120797469_120927360_120927467_120951242_120951446_120968713_120968916_120970392_120970607_120971940_120972064_120974923_120975110_120978433_120978584_120982715_120982881_120984470_120984744_120986277_120986615_120988207
WTC11_00055658	chr2	+	417	2	FSM	ENSG00000265451.1	ENST00000577914.1	682	2	265	0	265	0	multi-exon	FALSE	canonical	2	8	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTGTGCAACAGAAAG	121530670	True	NA	NA	False	ACTAAA	-20	NA	121530686	121532705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121530776_121532377
WTC11_00055661	chr2	+	1015	1	FSM	ENSG00000260163.1	ENST00000564121.1	4476	1	-10	3471	-10	-3471	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCAGTTTTGGTTTGTC	127025172	False	NA	NA	False	ATTAAA	-14	NA	127025200	127026215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127025200_127026200
WTC11_00055662	chr2	+	301	1	FSM	ENSG00000273950.1	ENST00000614637.1	258	1	97	-140	97	140	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTCAACAAGAGGGCGAG	NA	False	NA	NA	False	NA	NA	NA	127856986	127857287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127857000_127857300
WTC11_00055663	chr2	+	3760	1	FSM	ENSG00000272667.1	ENST00000609350.1	630	1	-852	-2278	-852	2278	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTCTAGTGTTTTGT	127885690	False	NA	12	True	AATAAA	-1	NA	127885703	127889463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127885700_127889500
WTC11_00055664	chr2	+	1785	1	FSM	ENSG00000213225.7	ENST00000452600.1	2235	1	440	10	440	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACTGAGGCAGCCCAT	NA	False	NA	NA	False	NA	NA	NA	130229818	130231603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130229800_130231600
WTC11_00055665	chr2	+	3176	10	NNC	ENSG00000136718.10	novel	2411	9	NA	NA	-995	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	321.76714991657	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	130341811	False	NA	21	True	AATAAA	-19	NA	130341881	130347810	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130341964_130342056_130342936_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
WTC11_00055668	chr2	+	5900	11	NNC	ENSG00000072135.13	novel	3616	15	NA	NA	-3759	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	30.1345316870862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130364559	False	NA	11	True	AATAAA	-17	NA	130365137	130375405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130369202_130369764_130369828_130370047_130370391_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156_130373221_130374665
WTC11_00055670	chr2	+	3656	14	FSM	ENSG00000136002.20	ENST00000636987.1	3656	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5968557655291	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	NA	False	NA	9	True	AATAAA	-15	NA	130916650	131047253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130917062_130917396_130917499_130930951_130931258_130946508_130946636_131027944_131028085_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
WTC11_00055674	chr2	+	3517	18	NNC	ENSG00000152117.18	novel	3785	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	38.6188006637426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131491141	True	NA	34	True	AATAAA	-18	NA	131493084	131521573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500351_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
WTC11_00055675	chr2	+	3938	20	NNC	ENSG00000152117.18	novel	3785	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	48.3723439220149	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131491141	True	NA	34	True	AATAAA	-18	NA	131493084	131521573	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131502454_131502693_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131519813_131520001_131520096
WTC11_00055676	chr2	+	3169	7	NIC	ENSG00000152117.18	novel	3785	18	NA	NA	22438	-28	intron_retention	FALSE	canonical	3	81	junction_4	50.9795710718192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAATAAACATGTCCTT	NA	False	NA	6	True	AATGAA	-18	NA	131515521	131521545	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
WTC11_00055678	chr2	+	1366	9	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	139	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	51.6610043940301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527954	True	NA	NA	False	AATAAA	-17	NA	131528072	131533666	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131528347_131528492_131528628_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
WTC11_00055680	chr2	+	1188	5	FSM	ENSG00000226953.8	ENST00000670944.1	1188	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.4790199457749	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTAGCAATGAGCTAG	133266322	False	NA	NA	False	TTTAAA	-31	NA	133266364	133285445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133284694
WTC11_00055681	chr2	+	5611	2	NNC	ENSG00000152127.9	novel	8332	16	NA	NA	194909	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	134448970	False	NA	23	True	AATAAA	-15	NA	134448980	134454621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_134450784_134450813
WTC11_00055682	chr2	+	5372	1	ISM	ENSG00000152127.9	ENST00000409645.5	8252	17	329068	0	195178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	134449239	False	NA	23	True	AATAAA	-15	NA	134449249	134454621	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_134449200_134454600
WTC11_00055683	chr2	+	5482	10	NIC	ENSG00000082258.13	novel	5414	10	NA	NA	-1	381	intron_retention	TRUE	canonical	2	4	junction_5	172.380071031685	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCTATAAAAGAGTGAGT	134913345	True	NA	NA	False	ATTAAA	-17	NA	134918823	134957398	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134945786_134945976_134946100_134946466_134947735_134947900_134952640_134952712_134953229
WTC11_00055684	chr2	+	4408	24	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	64.9594609660372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	135525658	True	NA	NA	False	AATAAA	-12	NA	135531451	135725266	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00055685	chr2	+	4621	25	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_14	79.3189762919315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTTTGTCTTTTTTTT	135525707	True	NA	NA	False	AATAAA	-16	NA	135531500	135725270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641791_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
WTC11_00055686	chr2	+	286	2	FSM	ENSG00000144229.13	ENST00000480352.1	531	2	245	0	245	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTGTGCCTTGCCCAG	NA	False	NA	NA	False	NA	NA	NA	137642487	137655640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_137642634_137655500
WTC11_00055687	chr2	+	484	4	FSM	ENSG00000204406.14	ENST00000473478.5	484	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCATCAAACACAGAGGAA	148021425	False	NA	NA	False	NA	NA	NA	148021436	148233327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148021685_148054390_148054450_148178699_148178794_148233244
WTC11_00055688	chr2	+	252	2	FSM	ENSG00000204406.14	ENST00000469438.1	252	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCACCCCACCCTGGC	148021571	False	NA	NA	False	NA	NA	NA	148021592	148041365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148021685_148041205
WTC11_00055689	chr2	+	1204	6	FSM	ENSG00000187123.15	ENST00000418762.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	28.5096474899287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCATTCCAAGAAGTAGT	149329742	False	NA	-9	True	CATAAA	-7	NA	149330662	149471095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149464163_149464476_149468644_149468776_149470682
WTC11_00055691	chr2	+	1407	1	FSM	ENSG00000213197.3	ENST00000439252.1	694	1	-738	25	-738	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATTTTTCCAAGGCCAA	NA	False	NA	NA	False	AAGAAA	-40	NA	152389198	152390605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152389200_152390600
WTC11_00055692	chr2	+	3355	3	FSM	ENSG00000177917.12	ENST00000463690.2	2170	3	636	-1821	636	20	multi-exon	FALSE	canonical	3	707	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACAAGTCAAAATGA	152720023	False	NA	36	True	NA	NA	NA	152720034	152762416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152720587_152734993_152735127_152759746
WTC11_00055693	chr2	+	2607	14	NIC	ENSG00000144278.15	novel	5657	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.6928678068503	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCAAAGCACATAAGAAT	153870663	True	NA	NA	False	ACTAAA	-10	NA	153871921	154450731	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_153872304_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020_154259139_154301408_154301590_154395990_154396131_154408983_154409083_154438591_154438727_154446567_154446766_154450410
WTC11_00055694	chr2	+	1672	8	NIC	ENSG00000144278.15	novel	5657	13	NA	NA	15	-149921	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	24.8349654762007	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATAACGTGTTGCTC	153870678	True	NA	-4	True	AATAAA	-13	NA	153871936	154259419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_153872177_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020
WTC11_00055695	chr2	+	4611	3	FSM	ENSG00000162989.5	ENST00000295101.3	4628	3	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_2	1	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTGATTTTTTGACA	154698701	True	NA	NA	False	AATAAA	-18	NA	154698711	154858354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_154699478_154709602_154709820_154854726
WTC11_00055696	chr2	+	357	1	FSM	ENSG00000227682.2	ENST00000412323.1	255	1	3	-105	3	105	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTATGTACAGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	155269635	155269992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_155269600_155270000
WTC11_00055697	chr2	+	288	1	FSM	ENSG00000270557.1	ENST00000604340.1	883	1	-184	779	-184	-779	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGATGTACATTCATGG	157877434	False	NA	NA	False	NA	NA	NA	157877498	157877786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_157877500_157877800
WTC11_00055698	chr2	+	4524	21	NNC	ENSG00000144283.23	novel	5777	21	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.5508321173311	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCTATTCTTT	158455118	True	NA	20	True	AATAAA	-21	NA	158456892	158681426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621116_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
WTC11_00055699	chr2	+	4380	20	NIC	ENSG00000144283.23	novel	4134	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	35.6418783217819	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGTTCTCTATTCT	158455189	True	NA	18	True	AATAAA	-19	NA	158456963	158681424	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634072_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158680428
WTC11_00055700	chr2	+	2772	9	FSM	ENSG00000144283.23	ENST00000480171.7	2772	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	37.9135529857068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCTATTCTTT	158662217	False	NA	20	True	AATAAA	-21	NA	158662241	158681426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
WTC11_00055702	chr2	+	272	1	FSM	ENSG00000277998.1	ENST00000613695.1	314	1	0	42	0	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAACATAGATTGTTG	NA	False	NA	NA	False	AAGAAA	-1	NA	164573740	164574012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_164573700_164574000
WTC11_00055703	chr2	+	2253	4	FSM	ENSG00000163093.12	ENST00000472667.1	2705	4	452	0	452	0	multi-exon	FALSE	canonical	2	5	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTCAGT	NA	False	NA	NA	False	AAGAAA	-30	NA	169499485	169506490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169499621_169503094_169503179_169504302_169504327_169504480
WTC11_00055704	chr2	+	6154	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	-4	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	191.560851950496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169575999	True	NA	NA	False	AATAAA	-16	NA	169584339	169641406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00055705	chr2	+	1446	11	NIC	ENSG00000138398.17	novel	6357	14	NA	NA	5	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	148.792103285087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGGAAGGGATCATGAA	169576033	True	NA	-75	True	AATAGA	-29	NA	169584373	169636723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
WTC11_00055707	chr2	+	1252	5	FSM	ENSG00000144362.12	ENST00000616481.4	1252	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	50.3338852066876	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAGTGTATCACTT	169692090	True	NA	7	True	AATAAA	-17	NA	169694453	169701706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697864_169697983_169700945
WTC11_00055709	chr2	+	1143	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	-11	6571	multi-exon	FALSE	canonical	2	8	junction_4	9.76933979345585	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGATGCTTACCTGG	170770917	False	NA	NA	False	AATAAA	-41	NA	170770965	170785300	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
WTC11_00055713	chr2	+	5714	13	NNC	ENSG00000115827.14	novel	5853	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	33.8996681399686	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTTTTGTGAACATG	171431636	True	NA	22	True	AATAAA	-21	NA	171434250	171485048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453127_171453214_171457970_171458076_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
WTC11_00055716	chr2	+	1640	13	NNC	ENSG00000152256.14	novel	1515	12	NA	NA	-83	6031	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	65.628796186498	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAACTCTTTTTCAC	172553334	False	NA	-21	True	NA	NA	NA	172556229	172614700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_172556347_172558707_172558850_172562219_172562292_172562740_172562801_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828_172596024_172614406
WTC11_00055717	chr2	+	1516	11	NNC	ENSG00000152256.14	novel	2990	12	NA	NA	-83	6044	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	65.8924123097645	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCTTCACTTGTCT	172553334	False	NA	-8	True	AATAAA	-6	NA	172556229	172614713	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172570725_172570825_172586277_172586389_172592934_172593049_172595828_172596024_172614406
WTC11_00055718	chr2	+	2572	20	FSM	ENSG00000091436.17	ENST00000409176.6	2572	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2017090201229	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	173075668	False	NA	NA	False	NA	NA	NA	173075713	173266783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173075816_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
WTC11_00055719	chr2	+	3197	7	FSM	ENSG00000144354.14	ENST00000467411.5	3176	7	-21	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	265.467145906147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341429	True	NA	15	True	AATAAA	-14	NA	173354871	173368904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173367149_173367287_173367633
WTC11_00055720	chr2	+	1306	3	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGTTTATTTCACA	173532260	True	NA	14	True	AATAAA	-8	NA	173532843	173693662	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_173533037_173533205_173533340_173692683
WTC11_00055722	chr2	+	3482	7	ISM	ENSG00000144306.15	ENST00000272732.11	3052	8	2532	-505	67	505	3prime_fragment	FALSE	canonical	2	11	junction_1	18.6070476492705	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGGACGTGTTTTC	174398069	False	NA	27	True	AATAAA	-27	NA	174398261	174430080	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
WTC11_00055723	chr2	+	569	2	FSM	ENSG00000226853.4	ENST00000444196.1	561	2	-8	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCAATTAATGATCTC	174487340	True	NA	NA	False	AATACA	-41	NA	174487380	174488156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_174487828_174488034
WTC11_00055724	chr2	+	271	2	FSM	ENSG00000226853.4	ENST00000417038.1	393	2	-22	144	1	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCAATTAATGATCTC	174487340	True	NA	NA	False	AATACA	-41	NA	174487380	174488156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_174487530_174488034
WTC11_00055726	chr2	+	1899	19	FSM	ENSG00000018510.18	ENST00000680770.1	3044	19	0	1145	0	-1145	multi-exon	TRUE	canonical	3	308	junction_12	44.8737598267368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTTTTTTGGGAGTAG	177386171	True	NA	NA	False	AAGAAA	-40	NA	177392745	177523805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747
WTC11_00055727	chr2	+	3224	24	NIC	ENSG00000079156.17	novel	10652	25	NA	NA	12	-40	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	10.2139679741488	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATCACATTCTGAATGA	178194065	True	NA	-34	True	NA	NA	NA	178194534	178395581	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_178194675_178284926_178285122_178306029_178306287_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
WTC11_00055728	chr2	+	1355	2	FSM	ENSG00000223960.8	ENST00000671679.1	1765	2	410	0	60	0	multi-exon	FALSE	canonical	3	25	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCAGAGGCTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	178430655	178434502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178430890_178433381
WTC11_00055733	chr2	+	530	4	FSM	ENSG00000163002.13	ENST00000497330.5	544	4	14	0	14	0	multi-exon	FALSE	canonical	2	4	junction_3	156.651063052747	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGTGCTGCTATGCCTGG	183118762	True	NA	NA	False	NA	NA	NA	183124389	183131117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183130994
WTC11_00055734	chr2	+	1595	3	FSM	ENSG00000272800.3	ENST00000608537.2	1595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTGTAAGAATGC	NA	False	NA	16	True	AATAAA	-29	NA	183182651	183215414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183182681_183188501_183188764_183214110
WTC11_00055735	chr2	+	7124	30	NNC	ENSG00000138448.12	novel	7039	30	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	25.5779334146558	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTATGGGGTTTAT	186589950	False	NA	8	True	AATAAA	-19	NA	186589967	186680901	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_186590524_186602020_186602152_186622338_186622431_186625472_186625588_186630799_186630859_186633328_186633375_186636081_186636208_186637064_186637110_186638276_186638321_186638408_186638466_186640914_186640968_186641385_186641589_186646685_186646878_186649839_186649886_186651981_186652090_186654649_186654709_186656246_186656402_186659037_186659176_186663767_186663836_186664493_186664642_186665125_186665219_186666703_186666784_186667149_186667231_186667670_186667777_186668761_186668921_186669700_186669815_186675603_186675718_186675819_186675928_186676812_186676936_186677196
WTC11_00055737	chr2	+	259	1	FSM	ENSG00000235616.1	ENST00000438916.1	1109	1	729	121	729	-121	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGGTGGCCTTCCAGG	NA	False	NA	NA	False	AATGAA	-45	NA	187826069	187826328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_187826100_187826300
WTC11_00055738	chr2	+	713	3	FSM	ENSG00000151687.15	ENST00000461516.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACACATTTAGCCGTAA	189674475	False	NA	NA	False	NA	NA	NA	189674606	189696200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189674831_189689526_189689965_189696149
WTC11_00055739	chr2	+	3234	11	FSM	ENSG00000064933.19	ENST00000432292.7	3234	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	145.283860080878	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	189783868	True	NA	21	True	AATAAA	-17	NA	189784084	189877628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189784594_189791789_189791942_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
WTC11_00055742	chr2	+	4155	8	NIC	ENSG00000138386.17	novel	4508	10	NA	NA	32	-4	intron_retention	FALSE	canonical	3	24	junction_5	37.3073281634303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACATTTATGTTTATAGC	190649101	False	NA	15	True	AATAAA	-15	NA	190649114	190692762	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685478_190685639_190687200_190687318_190690244
WTC11_00055743	chr2	+	1689	8	NIC	ENSG00000115419.13	novel	4475	15	NA	NA	-1	8315	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	123.152303250562	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCAGTATCCTTACGTA	190877156	True	NA	32	True	AATAAA	-29	NA	190880832	190913591	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190913192
WTC11_00055744	chr2	+	4489	15	NIC	ENSG00000115419.13	novel	4475	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	100.717021239446	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	190877202	True	NA	8	True	AATAAA	-16	NA	190880878	190935289	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932656
WTC11_00055745	chr2	+	4906	30	NIC	ENSG00000128641.19	novel	5069	31	NA	NA	7	-69	combination_of_known_splicesites	FALSE	canonical	3	38	junction_23	65.9046621617107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTCTGGGGATTTT	191239504	True	NA	14	True	TATAAA	-18	NA	191245410	191425317	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191400748_191400836_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
WTC11_00055746	chr2	+	3478	27	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	28.8131349485288	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGGAGATGGTGTTGCA	196637949	True	NA	5	True	AATAAA	-20	NA	196639676	196732793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718_196666849_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196695045_196695160_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719667_196720574_196720669_196721521_196721692_196725972_196726100_196729192_196729388_196729792_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
WTC11_00055747	chr2	+	4477	23	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	29	0	intron_retention	FALSE	canonical	3	10	junction_11	25.5270477198061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGGAGATGGTGTTGCA	196638016	True	NA	5	True	AATAAA	-20	NA	196639743	196732793	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196695045_196695160_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196720669_196721521_196721692_196725972_196726100_196729192_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
WTC11_00055750	chr2	+	1140	7	FSM	ENSG00000115540.15	ENST00000409355.2	1130	7	-10	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	649.68310651339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAATGAAGCATTAG	197504329	True	NA	51	True	NA	NA	NA	197516073	197551183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197535529_197535606_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
WTC11_00055751	chr2	+	1809	2	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	97	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTGGAATTCTTAC	197577356	True	NA	NA	False	NA	NA	NA	197578670	197582025	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468
WTC11_00055752	chr2	+	982	2	FSM	ENSG00000287858.1	ENST00000664764.1	989	2	0	7	0	-7	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAAGTATTAATTTTT	197640265	False	NA	NA	False	NA	NA	NA	197640440	197641567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197640502_197640646
WTC11_00055753	chr2	+	1805	2	FSM	ENSG00000225953.4	ENST00000666719.2	2090	2	288	-3	148	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	199457888	False	NA	7	True	AATAAA	-20	NA	199457984	199461422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199458010_199459642
WTC11_00055756	chr2	+	2220	13	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_12	330.468638199351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306367	True	NA	15	True	ATTAAA	-16	NA	200306890	200478530	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200472993_200477635
WTC11_00055757	chr2	+	1433	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	156.552884213468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881364	True	NA	21	True	AATAAA	-15	NA	200889365	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00055758	chr2	+	1382	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	159.814128147531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881364	True	NA	21	True	AATAAA	-15	NA	200889365	200903925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
WTC11_00055759	chr2	+	1511	2	FSM	ENSG00000003402.21	ENST00000490965.1	529	2	-981	-1	503	1	multi-exon	FALSE	canonical	2	7	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAATGCCTCCTTGCCTT	201117491	False	NA	4	True	ATTAAA	-15	NA	201117541	201119178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201118902_201119027
WTC11_00055760	chr2	+	1868	9	FSM	ENSG00000003402.21	ENST00000457277.5	1868	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.1483100823892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATCCCCATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	201129865	201163559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201162995
WTC11_00055761	chr2	+	3938	8	FSM	ENSG00000003400.15	ENST00000346817.9	3926	8	-12	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_4	3.09047252182628	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAAGAACACTGTTCT	201182982	True	NA	9	True	AGTAAA	-15	NA	201183156	201220080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201208074_201208184_201209069_201209563_201217587
WTC11_00055763	chr2	+	535	4	FSM	ENSG00000082146.13	ENST00000498648.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_3	10.6770782520313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTGCTAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	201474621	201478191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201474756_201475618_201475743_201477618_201477791_201478086
WTC11_00055764	chr2	+	322	1	FSM	ENSG00000227454.2	ENST00000450281.1	899	1	207	370	207	-370	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGATCTCCTGACCTC	NA	False	NA	NA	False	NA	NA	NA	202618189	202618511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202618200_202618500
WTC11_00055765	chr2	+	5703	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.7121740447148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	202632858	True	NA	23	True	AATAAA	-16	NA	202634976	202769757	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_202635345_202635615_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
WTC11_00055766	chr2	+	5703	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.7121740447148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	202632858	True	NA	23	True	AATAAA	-16	NA	202634976	202769757	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_202635342_202635612_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
WTC11_00055767	chr2	+	325	3	FSM	ENSG00000144426.19	ENST00000460416.2	518	3	0	193	0	-193	multi-exon	FALSE	canonical	2	3	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATCTAGTAGAAAAAATAA	203015318	False	NA	NA	False	NA	NA	NA	203016364	203049975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203016436_203041764_203041857_203049813
WTC11_00055768	chr2	+	886	1	FSM	ENSG00000204196.5	ENST00000431098.1	498	1	-330	-58	-330	58	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAATTATAGAATATT	NA	False	NA	34	True	AATAAA	-34	NA	203190449	203191335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203190400_203191300
WTC11_00055769	chr2	+	2652	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	-16	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	46.8350366836306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	203237121	True	NA	NA	False	NA	NA	NA	203239010	203298286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
WTC11_00055770	chr2	+	1187	10	NIC	ENSG00000119004.17	novel	1359	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	62.8278070071949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	203237143	True	NA	4	True	TATAAA	-24	NA	203239032	203297014	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203289764_203289877_203292261_203292327_203296473_203296564_203296757
WTC11_00055771	chr2	+	1216	10	NIC	ENSG00000119004.17	novel	1359	11	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	59.3666157173238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	203237156	True	NA	4	True	TATAAA	-24	NA	203239045	203297014	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203239135_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
WTC11_00055772	chr2	+	6364	10	NNC	ENSG00000138443.17	novel	6567	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	138.969221212628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	203317229	True	NA	15	True	AATAAA	-16	NA	203328391	203432169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366880_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
WTC11_00055773	chr2	+	5777	7	ISM	ENSG00000138443.17	ENST00000441061.5	1430	9	13385	-4645	0	0	3prime_fragment	FALSE	canonical	3	194	junction_5	96.1920821412379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	203380289	True	NA	19	True	AATAAA	-20	NA	203380307	203432173	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
WTC11_00055774	chr2	+	583	4	FSM	ENSG00000118257.17	ENST00000450507.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	27.7968823191858	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACACTGTGGGAACATCG	205680818	True	NA	NA	False	NA	NA	NA	205682500	205716246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205682579_205683090_205683364_205697543_205697722_205716192
WTC11_00055775	chr2	+	10347	6	FSM	ENSG00000204186.10	ENST00000649650.1	10303	6	-47	3	-21	0	multi-exon	FALSE	canonical	1	2	junction_4	6.54217089351845	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTCTGTTCTCTCTT	206273698	True	NA	4	True	ATTAAA	-6	NA	206274641	206314424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206274947_206279539_206279593_206280549_206280594_206281800_206281910_206297245_206297374_206304716
WTC11_00055776	chr2	+	2680	7	FSM	ENSG00000204186.10	ENST00000650097.1	2779	7	99	0	65	0	multi-exon	FALSE	canonical	1	2	junction_1	7.3352270282218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTTCATTCAGTGACTA	206275097	False	NA	NA	False	NA	NA	NA	206275108	206307161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206275181_206279539_206279593_206280549_206280594_206281800_206281910_206297245_206297374_206304716_206306876_206307046
WTC11_00055777	chr2	+	10217	7	NIC	ENSG00000204186.10	novel	1770	7	NA	NA	65	0	intron_retention	FALSE	canonical	1	2	junction_1	6.20931200339905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTCTGTTCTCTCTT	206275097	False	NA	4	True	ATTAAA	-6	NA	206275108	206314424	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_206275181_206279539_206279593_206280549_206280594_206281800_206281910_206292013_206292117_206297245_206297374_206304716
WTC11_00055778	chr2	+	2714	26	FSM	ENSG00000114948.13	ENST00000374415.7	2714	26	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_25	19.6340927979879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGGGGCAAAAGACCATG	206443854	False	NA	NA	False	AGTAAA	-5	NA	206443866	206617842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206444081_206445306_206445525_206481231_206481309_206530884_206530949_206542051_206542135_206543252_206543317_206547428_206547502_206548280_206548355_206550094_206550161_206557426_206557499_206559954_206560119_206561127_206561213_206562202_206562294_206565019_206565069_206567222_206567323_206570739_206570812_206571726_206571817_206573114_206573196_206587324_206587376_206588090_206588155_206589408_206589515_206592616_206592737_206594736_206594906_206596050_206596163_206605789_206605881_206617578
WTC11_00055779	chr2	+	5842	9	NIC	ENSG00000118260.15	novel	7650	9	NA	NA	-4	-126	combination_of_known_junctions	FALSE	canonical	3	42	junction_8	56.7230112035671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTTGTGAAATATTG	207520058	True	NA	-2	True	ATTAAA	-9	NA	207529935	207603305	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913_207597484_207599079
WTC11_00055780	chr2	+	14310	4	NIC	ENSG00000118260.15	novel	893	9	NA	NA	-4251	70	intron_retention	FALSE	canonical	3	27	junction_1	81.7978538159094	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTAGCAAAGAAACAAGT	207571020	False	NA	NA	False	NA	NA	NA	207571034	207606058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_207575455_207576630_207577225_207577504_207577656_207596913
WTC11_00055781	chr2	+	9632	41	NIC	ENSG00000115020.17	novel	9908	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	17.718616622073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACTTAGTTTTGAATCT	208263272	True	NA	29	True	AATAAA	-33	NA	208266362	208358746	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_208266416_208271510_208271692_208273583_208273734_208276711_208276831_208277536_208277709_208285725_208285934_208288728_208288819_208298640_208298780_208300936_208301095_208302241_208302354_208304170_208304319_208312235_208312296_208314293_208314424_208315192_208315374_208317866_208317942_208320251_208320360_208324141_208324283_208324910_208325038_208325269_208326430_208328179_208328281_208329841_208329914_208330522_208330695_208333314_208333494_208335305_208335420_208335792_208335902_208336045_208336201_208336837_208336929_208338507_208338569_208339417_208339556_208340010_208340132_208342553_208342650_208345110_208345195_208346049_208346148_208347858_208348024_208350023_208350084_208350770_208350948_208351351_208351456_208352653_208352783_208353897_208354160_208354570_208354646_208355189
WTC11_00055782	chr2	+	363	2	NNC	ENSG00000289113.1	novel	685	2	NA	NA	18	6108	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCGTGAGAAAATAAATTT	209297845	False	NA	-14	True	NA	NA	NA	209299707	209311004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_209299939_209310872
WTC11_00055784	chr2	+	1506	1	FSM	ENSG00000270659.1	ENST00000604818.1	690	1	-823	7	-823	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAATGTCTGATAGTTT	213151998	False	NA	NA	False	AATAAA	-16	NA	213152146	213153652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_213152100_213153700
WTC11_00055785	chr2	+	805	8	FSM	ENSG00000144451.20	ENST00000440779.5	805	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	157.698368762026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTCTTCGTGAAGCC	213279725	True	NA	NA	False	AAAAAG	-25	NA	213284436	213375054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213317218_213317357_213340162_213340271_213350527_213350646_213364075_213364146_213375009
WTC11_00055787	chr2	+	2894	1	FSM	ENSG00000279348.1	ENST00000623250.1	2116	1	-297	-481	-297	481	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGACGCAGCAAAAGTG	216211096	False	NA	NA	False	AAAACA	-5	NA	216211106	216214000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216211100_216214000
WTC11_00055788	chr2	+	367	2	FSM	ENSG00000138375.13	ENST00000486983.1	793	2	0	426	0	-426	multi-exon	FALSE	canonical	3	98	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTCTTCCCTAGGCAA	NA	False	NA	NA	False	NA	NA	NA	216447121	216451175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216447159_216450845
WTC11_00055789	chr2	+	355	4	NNC	ENSG00000197756.10	novel	2992	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5326.02424161045	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	216378205	True	NA	6	True	AATAAA	-12	NA	216498849	216501456	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_216498878_216499269_216499398_216499948_216500032_216501340
WTC11_00055790	chr2	+	2302	3	FSM	ENSG00000180871.8	ENST00000318507.7	2853	3	279	272	279	-272	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGATGTTGAAAAAGTT	218126295	True	NA	NA	False	NA	NA	NA	218126306	218136979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218126354_218129313_218129366_218134776
WTC11_00055791	chr2	+	1372	2	FSM	ENSG00000127838.15	ENST00000469689.1	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAAGTTATTGAGT	218261756	True	NA	-10	True	NA	NA	NA	218270519	218272911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218271550_218272569
WTC11_00055793	chr2	+	2534	7	NIC	ENSG00000074582.15	novel	1430	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_4	77.4180570381068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAGCTCAATAAACATCT	218657355	True	NA	-10	True	NA	NA	NA	218659736	218663414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662514_218662680_218662882_218663001_218663133
WTC11_00055800	chr2	+	1077	9	FSM	ENSG00000158552.13	ENST00000621130.4	1070	9	-10	3	-8	0	multi-exon	FALSE	canonical	2	4	junction_3	58.4759565975624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	219205539	True	NA	NA	False	AATAAA	-26	NA	219206773	219209648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
WTC11_00055802	chr2	+	1814	12	NIC	ENSG00000163516.14	novel	3245	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_9	100.969023970983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	219225136	True	NA	32	True	AATAAA	-14	NA	219229849	219236651	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219235707_219235876_219236009_219236096_219236321
WTC11_00055804	chr2	+	2691	11	FSM	ENSG00000144591.20	ENST00000683382.1	2691	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	98.8946914652147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00055805	chr2	+	1549	13	NIC	ENSG00000144591.20	novel	2193	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	127.786932039235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494705	True	NA	13	True	AATAAA	-17	NA	219498878	219506989	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00055807	chr2	+	1588	9	NIC	ENSG00000144591.20	novel	1522	13	NA	NA	229	0	intron_retention	FALSE	canonical	3	362	junction_5	15.8621995637427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAGCACAGACTGTACT	219501444	False	NA	11	True	AATAAA	-15	NA	219501472	219506987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
WTC11_00055809	chr2	+	647	1	FSM	ENSG00000226726.1	ENST00000440241.1	341	1	-345	39	-345	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGGCCACTCTTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	221532322	221532969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_221532300_221533000
WTC11_00055810	chr2	+	458	1	FSM	ENSG00000230406.2	ENST00000414016.1	421	1	4	-41	4	41	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTTAAGCCAATTAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	221592444	221592902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_221592400_221592900
WTC11_00055811	chr2	+	1175	1	FSM	ENSG00000226666.1	ENST00000432228.1	2029	1	914	-60	914	60	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTGAGCAGAAACGGGC	NA	False	NA	NA	False	AGTAAA	-5	NA	221962650	221963825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_221962600_221963800
WTC11_00055812	chr2	+	5500	17	FSM	ENSG00000123983.15	ENST00000680147.1	5500	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	176.072738875159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847722	True	NA	NA	False	AATAAA	-3	NA	222861013	222944609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222892263_222892302_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
WTC11_00055814	chr2	+	5365	9	NIC	ENSG00000144468.17	novel	5061	9	NA	NA	9	-1368	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	42.846929586611	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAATTATTTTAGTTAAT	226834140	True	NA	NA	False	AATAAA	-17	NA	226836064	226997842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_226837771_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
WTC11_00055818	chr2	+	3616	2	FSM	ENSG00000135932.12	ENST00000493540.1	561	2	1	-3056	1	163	multi-exon	FALSE	canonical	3	299	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCGCCCCCGTGCTCAT	NA	False	NA	NA	False	GGGGCT	-11	NA	230813983	230821238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230814115_230817753
WTC11_00055824	chr2	+	2161	21	FSM	ENSG00000135931.19	ENST00000682100.1	2161	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	58.0733157310653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194828	True	NA	-4	True	TTTAAA	-11	NA	231198660	231345181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226776_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00055826	chr2	+	2362	21	FSM	ENSG00000135931.19	ENST00000683966.1	2362	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.5234604549481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCATTTTGAAAAGCAT	231194872	True	NA	-2	True	AATAAA	-1	NA	231198704	231345183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226776_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
WTC11_00055831	chr2	+	7865	30	NIC	ENSG00000204120.16	novel	5978	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	49.8338022611183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	232690761	True	NA	NA	False	ATTAAA	-24	NA	232697351	232860605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
WTC11_00055841	chr2	+	4211	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-104	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_1	276.460500186311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	237627369	False	NA	10	True	AATAAA	-21	NA	237627482	237765915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237762602
WTC11_00055842	chr2	+	4131	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	226.672108778207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	237623505	True	NA	10	True	AATAAA	-21	NA	237627577	237765915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
WTC11_00055843	chr2	+	2039	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_1	210.031796097402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237623516	True	NA	21	True	ATTAAA	-23	NA	237627588	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00055844	chr2	+	2307	13	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_6	247.40244991152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237688840	True	NA	21	True	ATTAAA	-23	NA	237692209	237780315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237758728_237758822_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
WTC11_00055845	chr2	+	5245	26	Fusion	ENSG00000124831.19_ENSG00000177483.12	novel	3365	11	NA	NA	-43	0	multi-exon	TRUE	canonical	0	0	junction_15	316.998942584987	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTGAATTTAATGCTT	237692440	False	NA	5	True	AATAAA	-19	NA	237692450	237842808	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237813591_237813683_237816992_237818597_237818900_237818960_237820174_237820352_237821070_237821255_237821345_237821369_237821742_237821828_237823439_237823555_237824290_237824420_237827249_237827330_237827432_237827504_237829216_237829503_237833996_237834143_237834277_237834424_237841838
WTC11_00055849	chr2	+	5602	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	66	0	-7	0	multi-exon	FALSE	canonical	3	26	junction_5	146.910891359354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	238055521	True	NA	10	True	AATAAA	-16	NA	238060993	238099412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
WTC11_00055859	chr2	+	1592	11	FSM	ENSG00000115685.15	ENST00000407025.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	184.542921836629	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGTGATTGTTGACA	241149256	True	NA	28	True	ATTAAA	-16	NA	241149637	241183024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241149709_241150258_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
WTC11_00055866	chr2	+	801	2	FSM	ENSG00000168385.18	ENST00000451310.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGTTTTTAAAACCACT	241350001	True	NA	85	True	TTTAAA	-23	NA	241350086	241352626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241350204_241351942
WTC11_00055867	chr2	+	2586	6	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_5	39.1989795785554	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556083	True	NA	38	True	AATAAA	-28	NA	241558744	241574131	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296_241573016_241573055
WTC11_00055868	chr2	+	2424	7	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	42	junction_5	58.6031853514238	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556083	True	NA	38	True	AATAAA	-28	NA	241558744	241574131	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296_241572813_241572853_241573016_241573176
WTC11_00055870	chr2	+	2063	4	FSM	ENSG00000168397.17	ENST00000475693.1	2237	4	174	0	174	0	multi-exon	FALSE	canonical	3	532	junction_3	47.8121323515277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACCTTGTGTCTAT	241668389	False	NA	84	True	NA	NA	NA	241668432	241673849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241668686_241670725_241670783_241671311_241671406_241672190
WTC11_00055873	chr2	-	3950	3	NNC	ENSG00000184731.6	novel	3880	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-46691	True	NA	-4	True	AATAAA	-21	NA	46870	38813	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_41628_45439_46512_46806
WTC11_00055874	chr2	-	1757	9	NIC	ENSG00000035115.22	novel	1695	9	NA	NA	0	84	intron_retention	FALSE	canonical	3	47	junction_8	51.647240971808	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCTCCTTCCTGAACT	-263333	True	NA	84	True	NA	NA	NA	264568	218051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264541
WTC11_00055875	chr2	-	1733	10	NIC	ENSG00000035115.22	novel	1279	11	NA	NA	50	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	78.2864319796142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATTTCAATTTTGTTT	-264089	False	NA	-12	True	AATAAA	-21	NA	264108	218147	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_242797_242872_247537_247603_249730_249845_253004_253116_264083
WTC11_00055876	chr2	-	1657	9	NIC	ENSG00000035115.22	novel	2463	11	NA	NA	184	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	61.8383729976784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	-260089	False	NA	-13	True	AATAAA	-20	NA	260108	218148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_260084
WTC11_00055877	chr2	-	1683	9	NIC	ENSG00000035115.22	novel	1999	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	66.2314832613614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	NA	False	NA	-13	True	AATAAA	-20	NA	264831	218148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264781
WTC11_00055879	chr2	-	456	1	FSM	ENSG00000035115.22	ENST00000602998.1	502	1	-285	331	-285	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAAAATAAGCTAGAC	-256643	False	NA	NA	False	AAAAAG	-45	NA	256662	256206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_256200_256700
WTC11_00055881	chr2	-	1025	3	FSM	ENSG00000235688.3	ENST00000456949.3	869	3	-16	-140	-16	140	multi-exon	FALSE	canonical	3	18	junction_2	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGACAAGCTCTTGAATA	-949184	True	NA	NA	False	NA	NA	NA	950781	949486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_949802_949910_950387_950547
WTC11_00055883	chr2	-	2493	16	FSM	ENSG00000130508.11	ENST00000433670.5	2643	16	0	150	0	-150	multi-exon	FALSE	canonical	3	289	junction_12	46.5059136024657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGGAAGAGTCCC	-1744426	False	NA	NA	False	NA	NA	NA	1744442	1653225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
WTC11_00055884	chr2	-	460	2	FSM	ENSG00000242282.6	ENST00000423704.1	584	2	124	0	124	0	multi-exon	FALSE	canonical	2	5	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTATGTCGCAGTGTTCG	NA	False	NA	-5	True	AATAAA	-19	NA	3533246	3531989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107
WTC11_00055885	chr2	-	435	3	FSM	ENSG00000242282.6	ENST00000416463.1	436	3	0	1	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTATGTCGCAGTGTTCG	NA	False	NA	-5	True	AATAAA	-19	NA	3534143	3531989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107_3533191_3534112
WTC11_00055886	chr2	-	876	3	FSM	ENSG00000242282.6	ENST00000438482.1	914	3	0	38	0	-38	multi-exon	FALSE	canonical	2	2	junction_1	4	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCCCTACCTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	3536869	3533261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3533849_3534112_3534256_3536723
WTC11_00055887	chr2	-	266	2	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTCCTCAAATTGTC	NA	False	NA	NA	False	NA	NA	NA	5006546	5000768	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_5000885_5006396
WTC11_00055888	chr2	-	1488	2	FSM	ENSG00000228203.7	ENST00000655757.1	2715	2	0	1227	0	-632	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTCAGATTCTTTTT	NA	False	NA	NA	False	AATATA	-26	NA	6918720	6916055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6917225_6918401
WTC11_00055889	chr2	-	336	2	FSM	ENSG00000230515.1	ENST00000414654.1	469	2	66	67	66	-67	multi-exon	FALSE	canonical	3	9	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGTTCTTTTTCTA	-7672138	True	NA	NA	False	AATAAA	-27	NA	7672180	7671670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_7671908_7672081
WTC11_00055890	chr2	-	7273	30	NNC	ENSG00000134313.17	novel	7254	30	NA	NA	0	34549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8406406522585	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCCAAAAATTGAGAAAC	-8834437	True	NA	NA	False	NA	NA	NA	8837613	8686531	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_8686584_8728930_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812497_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
WTC11_00055891	chr2	-	825	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	124.364946829885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-9420406	True	NA	NA	False	ATTAAA	-34	NA	9423480	9406647	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
WTC11_00055896	chr2	-	518	2	FSM	ENSG00000169016.17	ENST00000498701.1	610	2	0	92	0	-92	multi-exon	FALSE	canonical	3	126	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTGATGAGAAACTGAA	-11462847	True	NA	NA	False	ATTAAA	-19	NA	11466158	11457102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11457234_11465771
WTC11_00055897	chr2	-	7116	51	NIC	ENSG00000151779.13	novel	7278	52	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	26.5530713854349	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-15559445	True	NA	-21	True	AATAAA	-16	NA	15561301	15166915	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_15167324_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
WTC11_00055898	chr2	-	1232	4	FSM	ENSG00000233718.9	ENST00000641263.1	1313	4	0	81	0	-81	multi-exon	FALSE	canonical	1	1	junction_1	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGAGCACAGTTTCTCC	-15941366	False	NA	-83	True	AAAAAG	-23	NA	15941582	15936345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15937177_15938499_15938726_15940973_15941098_15941531
WTC11_00055899	chr2	-	3832	11	NIC	ENSG00000197872.11	novel	4670	12	NA	NA	22	-688	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	21.6480946043757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGACTGAGATATTTAT	-16665040	True	NA	-8	True	AATAAA	-9	NA	16665806	16550146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16588049_16588130_16623863_16624020_16665779
WTC11_00055900	chr2	-	3703	3	FSM	ENSG00000214842.6	ENST00000399080.3	3730	3	22	5	22	-5	multi-exon	FALSE	canonical	1	3	junction_2	1.5	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATGTTGACTTATTA	-17518391	True	NA	NA	False	ATTAAA	-18	NA	17518418	17510583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17510956_17514011_17514093_17515168
WTC11_00055902	chr2	-	3795	27	NNC	ENSG00000163029.16	novel	5173	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_17	59.3606592771887	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATATTTAGTTTTGCT	-17747539	True	NA	NA	False	AATAAA	-13	NA	17753773	17665127	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718219_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
WTC11_00055903	chr2	-	2460	20	FSM	ENSG00000163029.16	ENST00000446852.5	2460	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	92.5373324379779	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAATAATAATAATA	-17747539	True	NA	NA	False	TATAAA	-10	NA	17753773	17703156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17740744_17740823_17741611_17741730_17745826_17745952_17752977_17753065_17753625
WTC11_00055904	chr2	-	1656	4	FSM	ENSG00000236204.6	ENST00000424895.1	1949	4	293	0	293	0	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGCCTTTTAAGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	19026678	18986450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18987869_18995318_18995365_19022333_19022488_19026640
WTC11_00055905	chr2	-	1271	3	NIC	ENSG00000183891.6	novel	779	2	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	80	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAGTTGTTAATATTG	-19900198	True	NA	-6	True	AATAAA	-14	NA	19901641	19896634	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_19897127_19897868_19898036_19901029
WTC11_00055906	chr2	-	6303	21	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_20	152.136410829229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20347724	True	NA	-10	True	AATAAA	-1	NA	20350832	20248736	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
WTC11_00055907	chr2	-	1062	7	NIC	ENSG00000118960.13	novel	4358	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	16.3545780203044	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTCATTCATGCT	-20649594	True	NA	-11	True	AATAAA	-14	NA	20651076	20622190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20622320_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
WTC11_00055909	chr2	-	5586	12	FSM	ENSG00000119778.15	ENST00000381024.4	5579	12	0	-7	0	0	multi-exon	FALSE	canonical	3	9	junction_7	19.1350139882514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCTTAATT	-23819844	False	NA	NA	False	AATAAA	-17	NA	23819855	23748663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786041_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746
WTC11_00055910	chr2	-	827	4	FSM	ENSG00000115129.14	ENST00000417886.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	78.92753357071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTTTTTAAGCGAGGAA	-24084501	False	NA	NA	False	NA	NA	NA	24084511	24079501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24079641_24080818_24081032_24083000_24083153_24084188
WTC11_00055911	chr2	-	601	4	FSM	ENSG00000176732.7	ENST00000465360.1	661	4	60	0	60	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATAAGTGTTGGTCA	-24123231	True	NA	NA	False	NA	NA	NA	24123259	24115396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24115612_24119576_24119683_24121162_24121301_24123117
WTC11_00055913	chr2	-	4264	2	ISM	ENSG00000115137.12	ENST00000264711.7	4847	7	20400	5	20058	-5	3prime_fragment	FALSE	canonical	2	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACACCGGTCTGTGGGC	NA	False	NA	-9	True	AGTAAA	-9	NA	24951555	24943646	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_24947749_24951393
WTC11_00055914	chr2	-	561	5	FSM	ENSG00000115137.12	ENST00000468467.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.14578098794425	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAACAAGGTAACCCCTC	-24971410	False	77	NA	False	NA	NA	NA	24971613	24957819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24957975_24958546_24958602_24963404_24963475_24967210_24967294_24971415
WTC11_00055916	chr2	-	2383	10	NNC	ENSG00000119772.19	novel	3149	16	NA	NA	0	24862	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.972042804514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCAGGCCCATATCCTG	-25244289	False	30	NA	False	NA	NA	NA	25244324	25202992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25203018_25232978_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154
WTC11_00055917	chr2	-	3579	20	NNC	ENSG00000119772.19	novel	3589	19	NA	NA	34	24862	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	148.000486635421	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCAGGCCCATATCCTG	-25246523	True	NA	NA	False	NA	NA	NA	25252277	25202992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25203019_25232977_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
WTC11_00055918	chr2	-	1622	4	ISM	ENSG00000119772.19	ENST00000321117.10	9421	23	18	53652	18	-74	5prime_fragment	FALSE	canonical	3	45	junction_3	4.64279609239471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTGCATGGATCCAA	-25341578	True	NA	-79	True	AGTAAA	-18	NA	25341907	25281525	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_25282712_25300138_25300244_25313912_25314162_25341825
WTC11_00055919	chr2	-	2160	18	FSM	ENSG00000138101.20	ENST00000398951.6	2160	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	66.171581518746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668252	True	NA	-22	True	AAAAAG	-7	NA	25673550	25377242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
WTC11_00055921	chr2	-	1840	9	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	-623	51998	intron_retention	FALSE	non_canonical	0	0	junction_1	267.95463701903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGGAAAGGAAGGAAG	-27203896	False	NA	NA	False	NA	NA	NA	27203926	27147588	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27147617_27199585_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778
WTC11_00055922	chr2	-	3024	17	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_10	214.884525676001	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211840	False	NA	0	True	AATAAA	-21	NA	27211888	27199586	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205411_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
WTC11_00055925	chr2	-	3870	20	Fusion	ENSG00000115207.14_ENSG00000115204.15	novel	3882	19	NA	NA	0	30	multi-exon	FALSE	non_canonical	0	0	junction_1	112.796509837756	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGACACAGTGGCTCAC	-27356761	True	NA	NA	False	NA	NA	NA	27356999	27311042	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_27311075_27325857_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
WTC11_00055926	chr2	-	582	1	FSM	ENSG00000213453.3	ENST00000394290.3	584	1	27	-25	27	25	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGTGACTTACCTTGTC	NA	False	NA	NA	False	AATGAA	-32	NA	27393340	27392758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27392800_27393300
WTC11_00055927	chr2	-	279	2	FSM	ENSG00000138002.16	ENST00000480892.1	477	2	0	198	0	-198	multi-exon	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTATGTCTTCCTGGAT	NA	False	NA	NA	False	NA	NA	NA	27447576	27446138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27446356_27447514
WTC11_00055928	chr2	-	335	2	FSM	ENSG00000138002.16	ENST00000675925.1	2658	2	0	2323	0	-879	multi-exon	FALSE	canonical	3	56	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACAGTGTATTCATGTG	-27488534	True	NA	NA	False	GATAAA	-28	NA	27489805	27485359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27485504_27489614
WTC11_00055931	chr2	-	1696	6	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	105.280577506015	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867313	True	NA	NA	False	AATAAA	-20	NA	28870264	28849820	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28869578
WTC11_00055932	chr2	-	703	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	674.608745866817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGAGGTTTTG	-32019674	True	NA	NA	False	NA	NA	NA	32039793	32012419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_32012447_32023904_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00055933	chr2	-	716	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	674.608745866817	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGAGGTTTTG	-32019686	True	NA	NA	False	NA	NA	NA	32039805	32012419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_32012449_32023905_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
WTC11_00055934	chr2	-	472	1	FSM	ENSG00000234587.1	ENST00000431951.1	384	1	-106	18	-106	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCTGAAGTTACTGAGC	NA	False	NA	NA	False	NA	NA	NA	35725248	35724776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_35724800_35725200
WTC11_00055935	chr2	-	474	1	FSM	ENSG00000171055.15	ENST00000535666.2	1913	1	731	708	189	-708	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTAAAAATGCTAGCCTT	-36588099	False	NA	NA	False	AGTAAA	-20	NA	36590822	36590348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36590300_36590800
WTC11_00055940	chr2	-	3303	9	NIC	ENSG00000119787.14	novel	1905	12	NA	NA	-27	5	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	85.6758972815576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGACCATTGGCTTTCTT	-38377232	False	NA	NA	False	ATTAAA	-29	NA	38377312	38293948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
WTC11_00055941	chr2	-	3078	15	NIC	ENSG00000163214.21	novel	4885	24	NA	NA	2553	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_2	33.7786915081091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-38854551	False	NA	-5	True	ATTAAA	-17	NA	38854565	38797728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_38798443_38802714_38802916_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053
WTC11_00055942	chr2	-	584	4	FSM	ENSG00000163214.21	ENST00000497514.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	15.06283137026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATTTCTGGAAAGACTA	-38818947	False	NA	NA	False	AATAAA	-15	NA	38818960	38806403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38806694_38813820_38813896_38815520_38815656_38818876
WTC11_00055943	chr2	-	4254	33	NNC	ENSG00000011566.15	novel	4271	33	NA	NA	0	177	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	58.3257872723335	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCTTTTGCAGAAACTT	-39437039	False	NA	NA	False	NA	NA	NA	39437065	39249088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_39250706_39251829_39251886_39254449_39254546_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
WTC11_00055945	chr2	-	280	1	FSM	ENSG00000232526.1	ENST00000447826.1	859	1	725	-146	725	146	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACCTTTTCAGACATAC	NA	False	NA	NA	False	NA	NA	NA	42463272	42462992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42463000_42463300
WTC11_00055949	chr2	-	3140	19	NNC	ENSG00000115970.19	novel	5900	36	NA	NA	7	2995	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	19.6595247546894	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGGAAAGATTTGGG	-43589785	False	NA	-13	True	AATAAA	-16	NA	43592409	43549072	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577123_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316
WTC11_00055954	chr2	-	5100	36	FSM	ENSG00000138095.20	ENST00000683072.1	5084	36	0	-16	0	0	multi-exon	FALSE	canonical	0	0	junction_9	414.45412931484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATTAGTCTGCTGTTT	-43964167	True	NA	-6	True	ATTAAA	-24	NA	43995962	43888268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934187_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
WTC11_00055955	chr2	-	6739	32	FSM	ENSG00000138095.20	ENST00000683802.1	6739	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	320.283683438934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCTACAGGTAATGACC	-43982289	True	NA	NA	False	NA	NA	NA	43982419	43899229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237
WTC11_00055957	chr2	-	483	1	FSM	ENSG00000273106.1	ENST00000609837.1	1235	1	837	-85	837	85	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCGCAGTACAAGATGATA	-44167979	False	NA	88	True	AATAAA	-7	NA	44168022	44167539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44167500_44168000
WTC11_00055958	chr2	-	6247	15	FSM	ENSG00000138078.16	ENST00000426481.5	6273	15	0	26	0	-25	multi-exon	FALSE	canonical	1	1	junction_1	57.2908797101178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATTAAAATTATGACC	-44360656	False	NA	NA	False	NA	NA	NA	44360674	44317635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44318390_44319005_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496
WTC11_00055959	chr2	-	4753	15	NNC	ENSG00000138078.16	novel	5212	15	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_14	56.3925744134775	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44361456	False	NA	-7	True	ATTAAA	-16	NA	44361474	44318762	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359597_44361379
WTC11_00055963	chr2	-	1162	7	NNC	ENSG00000143933.20	novel	770	7	NA	NA	0	32831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3559.915748847	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGCTTGAAGACAAGC	-47099978	True	NA	NA	False	NA	NA	NA	47176511	47127252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_47127285_47160163_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
WTC11_00055964	chr2	-	631	3	Genic_Genomic	ENSG00000230979.3	novel	531	1	NA	NA	0	110276	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACATAGGAGGAAGGA	-47691179	False	NA	NA	False	NA	NA	NA	47691246	47580439	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_47580469_47639778_47639803_47690668
WTC11_00055965	chr2	-	906	5	FSM	ENSG00000138081.22	ENST00000470899.1	908	5	2	0	2	0	multi-exon	FALSE	canonical	3	124	junction_1	23.6259920426635	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTTAGTAGAGGCCAAT	-47814279	False	NA	NA	False	AATGAA	-22	NA	47814296	47809229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47809267_47809599_47809708_47810315_47810427_47813233_47813378_47813790
WTC11_00055966	chr2	-	2822	18	NIC	ENSG00000138081.22	novel	3906	22	NA	NA	-353	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	42.8555956220955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-47905923	False	NA	-8	True	AGTAAA	-19	NA	47905933	47812848	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839001_47839418_47839501_47839641_47839770_47905488
WTC11_00055967	chr2	-	328	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	85	142	85	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCACATCAGAGCTTTTT	-48440454	False	NA	NA	False	NA	NA	NA	48440512	48440184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_48440200_48440500
WTC11_00055970	chr2	-	391	1	FSM	ENSG00000238165.1	ENST00000426912.1	237	1	-302	148	-302	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATGGCTACATGGACC	NA	False	NA	NA	False	AGTAAA	-27	NA	50829980	50829589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50829600_50830000
WTC11_00055972	chr2	-	1873	8	NIC	ENSG00000115239.24	novel	2226	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	90.7078737891421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-53783043	True	NA	-5	True	ATTAAA	-16	NA	53786849	53669979	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53750782_53750942_53765376_53765586_53786820
WTC11_00055974	chr2	-	2357	8	NNC	ENSG00000115310.19	novel	2390	8	NA	NA	0	49253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	394.62413013098	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATACCCTTTGACCAAC	-55038630	True	NA	NA	False	NA	NA	NA	55050544	54922933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_54922959_54972189_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
WTC11_00055975	chr2	-	4814	10	NNC	ENSG00000115310.19	novel	4697	9	NA	NA	0	49253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	540.913721697821	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATACCCTTTGACCAAC	-55038630	True	NA	NA	False	NA	NA	NA	55050544	54922933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_54922959_54972189_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55025085_55027486_55028163_55028221_55049744
WTC11_00055978	chr2	-	9188	32	NIC	ENSG00000115355.18	novel	9751	33	NA	NA	23	2	intron_retention	FALSE	canonical	3	37	junction_21	26.4321328742695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTATTAAATACCAAATCA	-55416410	False	NA	35	True	NA	NA	NA	55419056	55288115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
WTC11_00055980	chr2	-	1995	2	ISM	ENSG00000115355.18	ENST00000643103.1	2008	3	328	3506	99	-608	5prime_fragment	FALSE	canonical	3	129	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTTTACTTCTAAT	-55296319	False	NA	3	True	AATAAA	-27	NA	55296356	55294160	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_55296057_55296257
WTC11_00055983	chr2	-	559	6	FSM	ENSG00000115380.20	ENST00000440439.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.039722813987	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACCAGTGGAGTGTT	-55921399	True	NA	NA	False	NA	NA	NA	55923782	55917863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55918052_55918218_55918268_55922359_55922448_55922570_55922692_55922898_55922940_55923710
WTC11_00055984	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	137.320691165688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-58235794	True	NA	-3	True	AATAAA	-18	NA	58241323	58159242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
WTC11_00055987	chr2	-	357	1	FSM	ENSG00000271707.1	ENST00000605365.1	821	1	476	-12	476	12	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTCTCCACAGAGTAA	-60735218	False	NA	NA	False	NA	NA	NA	60735239	60734882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60734900_60735200
WTC11_00055991	chr2	-	4660	26	FSM	ENSG00000082898.19	ENST00000676783.1	4660	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	360.541712427286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537299	False	35	38	True	NA	NA	NA	61537774	61477688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61529065_61529160_61533771_61533904_61537561
WTC11_00055992	chr2	-	6776	24	FSM	ENSG00000082898.19	ENST00000428210.5	6776	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	372.755346311973	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTTTATTGACTCAT	-61515083	True	NA	-10	True	AATAAA	-16	NA	61538231	61477933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61525269_61525334_61525491_61526522_61533771_61533904_61537561
WTC11_00055993	chr2	-	322	1	FSM	ENSG00000252436.1	ENST00000516627.1	105	1	37	-254	37	254	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGTAATCATTCCAGG	NA	False	NA	NA	False	GGGGCT	-10	NA	62726703	62726381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_62726400_62726700
WTC11_00055994	chr2	-	524	2	FSM	ENSG00000143951.16	ENST00000487280.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTGCTACAAAAATAGAAT	NA	False	NA	94	True	NA	NA	NA	63153114	63121733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63122057_63152913
WTC11_00055996	chr2	-	761	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	100	-1011	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.3999641961486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGTCTCTGAGTTATC	-63588362	False	NA	-1	True	ATTAAA	-18	NA	63588377	63438467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
WTC11_00055997	chr2	-	4513	24	NIC	ENSG00000143952.20	novel	4725	23	NA	NA	31	-282	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	34.6013756733416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAATAAGGTGACAAGT	-64017366	True	NA	NA	False	TTTAAA	-23	NA	64019397	63892431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63913824_63913926_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981888_63983863_63984020_64018937
WTC11_00055998	chr2	-	4033	7	NIC	ENSG00000198369.10	novel	4519	6	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	50.7597828556777	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTTGGGGTATTT	-65430962	True	NA	-1	True	TATAAA	-15	NA	65432557	65310850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_65314170_65316733_65316884_65331986_65332052_65334604_65334774_65344718_65344897_65431961_65432085_65432528
WTC11_00056000	chr2	-	909	4	NIC	ENSG00000198369.10	novel	467	2	NA	NA	-113	-13	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	70.2709043630435	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGTAACAAGAAGTAGT	-65432593	False	NA	NA	False	AATAAA	-15	NA	65432750	65344208	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_65344595_65344718_65344897_65431961_65432085_65432528
WTC11_00056004	chr2	-	762	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	145.213253144776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433787	True	NA	-29	True	AATAAA	-23	NA	69437435	69396125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
WTC11_00056006	chr2	-	336	2	FSM	ENSG00000179818.16	ENST00000596259.3	791	2	455	0	455	0	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTCCTGGAATGCCACAA	NA	False	NA	NA	False	NA	NA	NA	69964319	69963253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69963501_69964230
WTC11_00056007	chr2	-	658	3	ISM	ENSG00000179818.16	ENST00000691445.1	1297	4	1001	483	16	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGTTTTTAGAGAGA	NA	False	NA	NA	False	AAAACA	-25	NA	70018081	69993862	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_69994251_69996685_69996889_70018014
WTC11_00056008	chr2	-	3315	5	FSM	ENSG00000179818.16	ENST00000659941.1	3305	5	0	-10	0	0	multi-exon	TRUE	canonical	3	16	junction_4	9.48683298050514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGAGTTTGCATCTAT	-70086878	False	NA	NA	False	ATTAAA	-9	NA	70086899	70030004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70085815
WTC11_00056011	chr2	-	4543	12	NIC	ENSG00000116001.17	novel	4634	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_5	116.887881576766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	NA	False	NA	1	True	AATAAA	-25	NA	70236175	70209443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216752_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078
WTC11_00056014	chr2	-	3922	14	NIC	ENSG00000116001.17	novel	4634	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_7	143.311718016044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGGGATCTTCTTGCA	-70238473	True	NA	-23	True	ATTAAA	-21	NA	70248611	70210204	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70225327_70225394_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
WTC11_00056015	chr2	-	480	5	NNC	ENSG00000143977.14	novel	594	4	NA	NA	0	43104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3171.2557745316	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAACGTCAATGTTCTT	-70249324	True	NA	NA	False	NA	NA	NA	70293740	70238257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_70238286_70281503_70281685_70288067_70288193_70289349_70289373_70293617
WTC11_00056018	chr2	-	500	1	FSM	ENSG00000272735.1	ENST00000608897.1	607	1	112	-5	112	5	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCATGTATTCATTTAT	-71067922	False	NA	6	True	AGTAAA	-26	NA	71068013	71067513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71067500_71068000
WTC11_00056020	chr2	-	1200	4	NIC	ENSG00000124370.11	novel	836	2	NA	NA	0	-6	intron_retention	FALSE	canonical	1	5	junction_2	24.0739601136904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTACAATGGGGTAATTG	-71127628	True	NA	-15	True	AATAAA	-9	NA	71130214	71109692	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_71110123_71110762_71110859_71124367_71124544_71129716
WTC11_00056022	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071253	False	2264	NA	False	TATAAA	-30	NA	73071266	73049085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73049900_73058527_73058597_73070459
WTC11_00056024	chr2	-	4837	7	NNC	ENSG00000114978.18	novel	4896	6	NA	NA	0	29850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.69673922392	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTAGTGGCACATG	-74168491	True	NA	NA	False	NA	NA	NA	74178866	74122677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74122702_74152597_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
WTC11_00056025	chr2	-	4870	6	NIC	ENSG00000114978.18	novel	4896	6	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	3	107	junction_5	305.847020583821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTCTGTGGATTTTT	-74168485	True	NA	NA	False	AATATA	-16	NA	74178860	74152531	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172750_74178660
WTC11_00056026	chr2	-	2115	2	FSM	ENSG00000284308.2	ENST00000640331.1	883	2	0	-1232	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCTCTTGTCAGTT	-74421431	True	NA	-2	True	AATAAA	-25	NA	74421591	74414175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74416242_74421542
WTC11_00056029	chr2	-	2247	2	FSM	ENSG00000115275.15	ENST00000489655.1	489	2	-34	-1724	-25	0	multi-exon	FALSE	canonical	2	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAACTCTATTGCTTT	-74455487	False	NA	-13	True	AATAAA	-12	NA	74463671	74461069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74462835_74463189
WTC11_00056034	chr2	-	2143	13	NIC	ENSG00000115318.12	novel	3689	14	NA	NA	0	144	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	61.3500882911617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGGCCCCTAATGGCA	-74553805	True	NA	NA	False	NA	NA	NA	74553942	74533583	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368_74549584_74550184_74550349_74552321_74552647_74553875
WTC11_00056035	chr2	-	3649	13	FSM	ENSG00000005436.14	ENST00000470197.5	3648	13	0	-1	0	0	multi-exon	FALSE	canonical	2	9	junction_10	36.6943077632243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75701342	False	NA	-3	True	ATTAAA	-21	NA	75701372	75662704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75694240_75694428_75696199_75696316_75701189
WTC11_00056036	chr2	-	4391	17	NNC	ENSG00000005436.14	novel	4367	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_15	30.0550926425123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75709037	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702448_75706522_75706652_75710590
WTC11_00056037	chr2	-	2689	5	ISM	ENSG00000005436.14	ENST00000427862.1	632	6	12450	-201	-5228	-14	3prime_fragment	FALSE	canonical	3	113	junction_4	13.8089644796415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCCCTTTGATTCTT	NA	False	NA	-15	True	ATTAAA	-25	NA	75675442	75664432	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443
WTC11_00056038	chr2	-	6180	2	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGCGATTGCTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	77099884	77088261	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_77088409_77093851
WTC11_00056039	chr2	-	420	1	FSM	ENSG00000225787.1	ENST00000436601.1	306	1	2	-116	2	116	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGCCGGGCGTGGTGGC	NA	False	NA	NA	False	AAGAAA	-6	NA	85102692	85102272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85102300_85102700
WTC11_00056040	chr2	-	1318	11	NNC	ENSG00000042493.16	novel	1250	10	NA	NA	-35	58408	intron_retention	FALSE	non_canonical	0	0	junction_1	277.013790270448	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTACTTTGGTTC	-85410394	False	5105	NA	False	AAAAAG	-14	NA	85410405	85336344	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_85336374_85394752_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
WTC11_00056046	chr2	-	1801	9	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_5	46.5763821587723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591377	False	11309	0	True	ATTAAA	-17	NA	85602686	85598546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85600499_85600760_85601020_85601108_85601434_85601483_85601883_85602065_85602606
WTC11_00056047	chr2	-	2149	6	FSM	ENSG00000115525.18	ENST00000639119.1	2131	6	0	-18	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.9361784915939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCGTAGTCTGGTTAA	-85888616	True	NA	-18	True	AATAAA	-12	NA	85888963	85839150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888823
WTC11_00056048	chr2	-	2218	7	FSM	ENSG00000115525.18	ENST00000640992.1	2292	7	81	-7	-10	0	multi-exon	FALSE	canonical	1	1	junction_6	11.422443793787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTAAAAAGATGAAAAA	-85888348	False	NA	-56	True	AAGAAA	-44	NA	85888695	85839188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888607
WTC11_00056049	chr2	-	1203	6	FSM	ENSG00000115525.18	ENST00000638581.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	12.3125951772971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGATACTTTGAAGTGC	NA	False	NA	NA	False	NA	NA	NA	85870179	85840064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85870071
WTC11_00056052	chr2	-	4577	2	FSM	ENSG00000239305.7	ENST00000472030.1	4560	2	0	-17	0	15	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAAATTTTTTTGATA	-86614280	False	NA	NA	False	AATAAA	-33	NA	86614699	86603382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86605419_86612158
WTC11_00056053	chr2	-	2244	12	NNC	ENSG00000285793.1	novel	2217	11	NA	NA	0	35531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.903534969893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATATTTATTTCTCACC	-87073675	True	NA	NA	False	NA	NA	NA	87076429	86995143	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86995171_87030674_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
WTC11_00056054	chr2	-	2245	12	NNC	ENSG00000285793.1	novel	2217	11	NA	NA	0	35531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.903534969893	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATATTTATTTCTCACC	-87073675	True	NA	NA	False	NA	NA	NA	87076429	86995143	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86995172_87030674_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
WTC11_00056055	chr2	-	3114	10	NIC	ENSG00000285793.1	novel	2217	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	135	junction_2	138.381740749419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-87073664	True	NA	NA	False	AATAAA	-20	NA	87076418	87030674	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
WTC11_00056056	chr2	-	1723	4	NNC	ENSG00000172086.9	novel	1807	4	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	34.2928563989645	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGTTGTTGTGTGTCA	-88054186	True	NA	-8	True	AATAAA	-13	NA	88055763	88027207	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_88028586_88034133_88034232_88036942_88037052_88055625
WTC11_00056057	chr2	-	1208	2	FSM	ENSG00000172071.15	ENST00000668866.1	1208	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTCCTTCGTTTTGTA	-88691396	True	NA	NA	False	NA	NA	NA	88691464	88690176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88691316_88691395
WTC11_00056058	chr2	-	580	1	FSM	ENSG00000232531.3	ENST00000413684.1	1047	1	413	54	413	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGGACCGCAGCAAGGC	-91748562	False	NA	NA	False	NA	NA	NA	91748573	91747993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_91748000_91748600
WTC11_00056059	chr2	-	217	3	ISM	ENSG00000286156.2	ENST00000651108.1	1120	8	4338	639	4338	-466	internal_fragment	FALSE	canonical	3	7	junction_2	22.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAATTTGAAGATGCT	NA	False	NA	NA	False	NA	NA	NA	94198949	94196695	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_94196721_94197635_94197759_94198880
WTC11_00056061	chr2	-	872	1	Genic_Genomic	ENSG00000144026.12	novel	NA	NA	NA	NA	-248	-12064	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACTAGTTATACTATT	-95164915	True	NA	-17	True	AATATA	-36	NA	95165661	95164789	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_95164800_95165700
WTC11_00056062	chr2	-	1949	4	FSM	ENSG00000174501.15	ENST00000488721.5	2740	4	0	791	0	-791	multi-exon	FALSE	canonical	1	2	junction_1	8.9566858950296	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTCTTATTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	95859929	95853080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95853862_95855265_95856181_95857308_95857493_95859860
WTC11_00056064	chr2	-	5747	20	NNC	ENSG00000114982.19	novel	5156	21	NA	NA	-857	57028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8918226904997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGAGGTGGTTAG	-96629809	False	NA	NA	False	AATAGA	-45	NA	96632341	96536141	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96536169_96593171_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311
WTC11_00056066	chr2	-	4950	20	NIC	ENSG00000114982.19	novel	5253	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	38.6299296937497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACAACATTTGGAT	-96635814	True	NA	-26	True	ATTAAA	-4	NA	96638346	96593182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96595632_96601642_96601777_96602752_96602863_96604249_96604381_96604778_96604858_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
WTC11_00056069	chr2	-	3689	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	653	-2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	69.9711310732753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	-96867817	True	NA	0	True	AATAAA	-35	NA	96869427	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869186
WTC11_00056070	chr2	-	4556	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	-226	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_14	73.8322699206292	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTTGGGCTAAAGCC	NA	False	NA	0	True	AATAAA	-35	NA	96870983	96859719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869875
WTC11_00056071	chr2	-	1093	2	ISM	ENSG00000196912.13	ENST00000443455.5	1661	21	39668	1445	-38587	-1445	internal_fragment	FALSE	canonical	3	31	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGTAGGAGAACTAAGG	NA	False	NA	NA	False	AAAACA	-30	NA	97550196	97549009	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_97549492_97549585
WTC11_00056073	chr2	-	941	2	FSM	ENSG00000144218.21	ENST00000498090.1	1673	2	491	241	491	-241	multi-exon	FALSE	canonical	2	3	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGGAATGTCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	100007460	100006389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_100007018_100007147
WTC11_00056075	chr2	-	3674	18	NNC	ENSG00000204634.13	novel	1093	3	NA	NA	-54	-7499	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	30.3626295527315	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTCAGCTTTCTGT	-101149397	True	NA	-20	True	AATAAA	-18	NA	101151436	101018538	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_101019248_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
WTC11_00056077	chr2	-	2017	8	FSM	ENSG00000163162.9	ENST00000424632.5	2010	8	0	-7	0	4	multi-exon	FALSE	canonical	1	1	junction_2	53.0483029792621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTGATTTTGATCCT	-101305664	True	NA	-20	True	AATAAA	-26	NA	101308701	101271214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101271745_101273126_101273342_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
WTC11_00056080	chr2	-	1555	7	NNC	ENSG00000115641.19	novel	1582	7	NA	NA	0	60955	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.1245915016974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCAAAAAAAGAAAGCAAGA	-105396096	True	NA	NA	False	AGTAAA	-25	NA	105399050	105296756	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_105296785_105360828_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
WTC11_00056081	chr2	-	2301	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	0	88	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGGCGTGGTGGCTCA	-105336881	True	NA	29	True	TATAAA	-39	NA	105337475	105333938	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_105335069_105336304
WTC11_00056083	chr2	-	718	1	ISM	ENSG00000153165.19	ENST00000304514.11	5510	23	44566	31753	44566	-19637	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTACTTTGTTGTTAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	106423760	106423042	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106423000_106423800
WTC11_00056084	chr2	-	314	2	FSM	ENSG00000214184.3	ENST00000440975.1	574	2	15	245	15	-245	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAGTTCACATTTTA	-108533970	True	NA	NA	False	NA	NA	NA	108534167	108511933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_108512013_108533932
WTC11_00056085	chr2	-	2203	4	NNC	ENSG00000144063.4	novel	2317	4	NA	NA	24060	15280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.4863798048204	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGTATTGTATTC	NA	False	NA	NA	False	NA	NA	NA	110091761	110068589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_110068621_110083870_110085758_110087571_110087698_110091602
WTC11_00056086	chr2	-	3822	19	FSM	ENSG00000144061.14	ENST00000461707.5	3822	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	26.8985864055583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTATATCTAAATTTA	-110204974	False	8723	NA	False	AATAAA	-14	NA	110205001	110123587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
WTC11_00056087	chr2	-	629	6	ISM	ENSG00000256671.7	ENST00000632897.2	2091	10	17263	1211	17263	-454	internal_fragment	FALSE	canonical	0	0	junction_4	24.5161171477051	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTCAAGTAAGTGTACG	NA	False	NA	NA	False	ACTAAA	-3	NA	110455553	110447093	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_110447161_110449818_110449868_110451160_110451254_110451863_110452015_110454850_110455001_110455434
WTC11_00056089	chr2	-	453	1	FSM	ENSG00000172965.17	ENST00000605570.1	1103	1	966	-316	966	56	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCTCAGGATGGATAC	NA	False	NA	NA	False	NA	NA	NA	111208151	111207698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111207700_111208200
WTC11_00056090	chr2	-	438	1	FSM	ENSG00000225496.1	ENST00000427559.1	735	1	-70	367	-70	-367	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGTAAATAATCCTGATT	NA	False	NA	NA	False	GATAAA	-4	NA	111941106	111940668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111940700_111941100
WTC11_00056091	chr2	-	1506	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	4	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.5991448356198	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAAATTTAGAGTTCGT	-112253789	True	NA	-5	True	AATAAA	-27	NA	112255056	112215869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233316_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
WTC11_00056093	chr2	-	6688	19	ISM	ENSG00000169629.12	ENST00000302558.8	7299	23	15733	12	4107	-12	3prime_fragment	FALSE	canonical	3	61	junction_1	45.394328519413	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTATGTTACCCACTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	112417912	112368380	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683
WTC11_00056094	chr2	-	544	2	FSM	ENSG00000169629.12	ENST00000482903.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTATTCCTGAACCTATT	NA	False	NA	NA	False	AATAAA	-6	NA	112401560	112400094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112400195_112401116
WTC11_00056096	chr2	-	1832	1	FSM	ENSG00000279267.1	ENST00000623707.1	2042	1	153	57	153	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTTGTTCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	113607755	113605923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113605900_113607800
WTC11_00056097	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	-113625903	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113612248_113625608_113625730_113626829
WTC11_00056098	chr2	-	610	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	0	-9947	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	16	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113625953	True	NA	-3	True	ATTAAA	-27	NA	113627090	113621725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_113622162_113625608_113625730_113627037
WTC11_00056099	chr2	-	548	3	FSM	ENSG00000258910.3	ENST00000584273.1	612	3	61	3	61	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTCTAAGCCTCAACTT	NA	False	NA	NA	False	ATTAAA	-16	NA	118834548	118833702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_118834133_118834346_118834404_118834487
WTC11_00056101	chr2	-	924	1	FSM	ENSG00000213239.3	ENST00000412580.1	604	1	5	-325	5	325	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATCAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	AATAAA	-11	NA	121709110	121708186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121708200_121709100
WTC11_00056102	chr2	-	202	1	FSM	ENSG00000213236.3	ENST00000440317.1	728	1	621	-95	621	95	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTATGACAGGTTTATG	NA	False	NA	NA	False	NA	NA	NA	126557541	126557339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_126557300_126557500
WTC11_00056103	chr2	-	255	1	FSM	ENSG00000260634.1	ENST00000567613.1	1472	1	1086	131	1086	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCACTTTTAAGATTACA	-127024627	False	NA	NA	False	AGTAAA	-30	NA	127024637	127024382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127024400_127024600
WTC11_00056104	chr2	-	2272	16	NNC	ENSG00000136717.15	novel	2487	19	NA	NA	0	5846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7985507070754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGGGAAGCAGGAGGTTT	-127107265	False	NA	NA	False	AAAACA	-3	NA	127107278	127042180	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127042211_127048031_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00056105	chr2	-	2497	18	FSM	ENSG00000136717.15	ENST00000357970.7	2497	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	82.0677414508966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127053421_127053446_127053904_127054013_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00056106	chr2	-	2401	16	FSM	ENSG00000136717.15	ENST00000346226.7	2401	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.0958538351206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
WTC11_00056107	chr2	-	446	3	NNC	ENSG00000163161.14	novel	2718	15	NA	NA	5	-813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTGCCGAATAAATAG	-127289107	True	NA	NA	False	NA	NA	NA	127294132	127293247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127293409_127293512_127293719_127294053
WTC11_00056108	chr2	-	2825	14	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	133.152090820763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-127526620	True	NA	-9	True	AATAAA	-15	NA	127526802	127480811	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526635
WTC11_00056110	chr2	-	1515	6	FSM	ENSG00000072163.20	ENST00000409286.5	1678	6	156	7	156	-5	multi-exon	FALSE	canonical	2	9	junction_5	1.49666295470958	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAACCACAGCAGCCTG	NA	False	NA	-11	True	AATGAA	-9	NA	127643072	127638432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922
WTC11_00056111	chr2	-	1924	1	ISM	ENSG00000136709.12	ENST00000393006.5	3574	8	73826	34	73608	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTGACCTTCAAATAA	NA	False	NA	-2	True	AATAAA	-17	NA	127737345	127735421	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_127735400_127737300
WTC11_00056112	chr2	-	4549	8	NIC	ENSG00000144233.11	novel	4860	9	NA	NA	-240	-446	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	31.6156768140137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTAGAGTCTGTCGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	127886207	127862099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869545_127870761_127870929_127873827_127874273_127884202_127884313_127885809
WTC11_00056113	chr2	-	4081	21	NNC	ENSG00000136715.19	novel	4084	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	43.3654240149915	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-128022318	True	NA	-7	True	AATAAA	-22	NA	128028059	127941221	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950406_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00056114	chr2	-	4115	21	NNC	ENSG00000136715.19	novel	4084	21	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_14	36.9625147953978	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-128022352	True	NA	-7	True	AATAAA	-22	NA	128028093	127941221	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000452_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
WTC11_00056115	chr2	-	385	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	14	8	-3	-6	multi-exon	FALSE	canonical	2	5	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCCTCTGTGTCTGC	-129934267	True	NA	NA	False	AATAAA	-12	NA	129934308	129922868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_129923000_129923557_129923682_129934178
WTC11_00056116	chr2	-	2027	4	NNC	ENSG00000180178.11	novel	709	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	22.0957512255687	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGGTCATTGTCATTA	-130035421	False	NA	NA	False	AATAAA	-19	NA	130035436	130025997	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130027538_130028308_130028484_130034309_130034378_130035192
WTC11_00056122	chr2	-	410	3	FSM	ENSG00000178162.8	ENST00000449066.5	409	3	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	77	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130425121	False	NA	NA	False	AATAAA	-14	NA	130425138	130416754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130416942_130419070_130419246_130425090
WTC11_00056123	chr2	-	680	6	NIC	ENSG00000178162.8	novel	564	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	50.1932266346765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427713	False	NA	NA	False	AATAAA	-14	NA	130427730	130416754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130416942_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
WTC11_00056124	chr2	-	3396	4	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-266	0	intron_retention	FALSE	canonical	3	20	junction_2	57.5905084772367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130428425	False	NA	NA	False	AATAAA	-14	NA	130428442	130416754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130419246_130425090_130425159_130426165_130426264_130427703
WTC11_00056125	chr2	-	5599	8	NNC	ENSG00000152102.18	novel	5435	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	157.184539926281	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-131085493	True	NA	-13	True	AATAAA	-18	NA	131093469	131047875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131091808_131091964_131093213
WTC11_00056126	chr2	-	879	6	NIC	ENSG00000152102.18	novel	5435	7	NA	NA	57	-4324	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	140.206419253899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAATCATATCTAGTT	-131093358	False	NA	-12	True	GATAAA	-17	NA	131093371	131052199	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_131052453_131052890_131053016_131055271_131055450_131071854_131071939_131082576_131082658_131093213
WTC11_00056127	chr2	-	422	1	FSM	ENSG00000236516.1	ENST00000451959.1	1225	1	308	495	308	-495	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGCCACTGCGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	131300136	131299714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131299700_131300100
WTC11_00056128	chr2	-	200	1	FSM	ENSG00000224425.2	ENST00000417338.1	1026	1	203	623	203	-623	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCTCACAATCCTAGCA	NA	False	NA	NA	False	NA	NA	NA	131353036	131352836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131352800_131353000
WTC11_00056130	chr2	-	208	2	FSM	ENSG00000273073.1	ENST00000609270.1	580	2	107	265	107	-265	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTGGCCTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	131463508	131462085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131462126_131463340
WTC11_00056131	chr2	-	618	4	NNC	ENSG00000173272.16	novel	599	3	NA	NA	0	2163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	757.891959465346	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTCAAAGCTGGGTGC	-131483459	True	NA	NA	False	AAAAAG	-9	NA	131492376	131467645	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_131467687_131483960_131484219_131491875_131492025_131492206
WTC11_00056132	chr2	-	1250	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	380	52	380	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACTAAATGATTCATGT	-132346897	False	NA	NA	False	AATAAA	-3	NA	132346917	132345667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_132345700_132346900
WTC11_00056133	chr2	-	1211	3	FSM	ENSG00000152128.13	ENST00000476823.1	5078	3	3811	56	3811	-56	multi-exon	FALSE	canonical	3	8	junction_1	1.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTTGCCCGGGCAGT	NA	False	NA	-61	True	NA	NA	NA	134466225	134455819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_134456777_134458031_134458174_134466113
WTC11_00056136	chr2	-	3836	18	NNC	ENSG00000076003.5	novel	3753	17	NA	NA	-41	53934	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.910106674665	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAATATTCACTGCAT	-135861795	True	NA	NA	False	NA	NA	NA	135876484	135785691	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_135785724_135839615_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
WTC11_00056137	chr2	-	2959	18	NNC	ENSG00000076003.5	novel	3753	17	NA	NA	0	6187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.910106674665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGAAGGAGTTCTCTC	-135861754	True	NA	NA	False	AAAAAG	-3	NA	135876443	135833438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_135833466_135840446_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
WTC11_00056138	chr2	-	1408	1	FSM	ENSG00000121966.7	ENST00000409817.1	1895	1	373	114	373	-114	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCCAAAGTGGTATAGAAA	-136115749	False	NA	NA	False	NA	NA	NA	136115870	136114462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136114500_136115900
WTC11_00056139	chr2	-	2209	10	FSM	ENSG00000121964.15	ENST00000409298.5	2209	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	38.0438343668634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	NA	False	NA	-7	True	AATAAA	-30	NA	144235737	143946015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
WTC11_00056140	chr2	-	6473	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	-1	0	0	multi-exon	FALSE	canonical	3	17	junction_12	124.402460675914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-148011709	True	NA	0	True	TATAAA	-18	NA	148020737	147930395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
WTC11_00056141	chr2	-	6329	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	-1	0	0	multi-exon	FALSE	canonical	1	4	junction_10	138.272231485573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-148011733	True	NA	0	True	TATAAA	-18	NA	148020761	147930395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
WTC11_00056142	chr2	-	465	1	FSM	ENSG00000224007.1	ENST00000415008.1	1024	1	701	-142	701	142	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTATTTTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	148295978	148295513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_148295500_148296000
WTC11_00056143	chr2	-	545	1	FSM	ENSG00000226340.1	ENST00000413336.1	545	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTGTGTAGTAAAGTG	NA	False	NA	NA	False	NA	NA	NA	148872797	148872252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_148872300_148872800
WTC11_00056146	chr2	-	516	5	FSM	ENSG00000183091.21	ENST00000498015.2	516	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	2.58602010819715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACTGAGCCTGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	151506947	151492098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151492282_151492386_151492495_151505477_151505571_151506165_151506259_151506908
WTC11_00056147	chr2	-	3080	7	NNC	ENSG00000162980.17	novel	5264	6	NA	NA	0	30689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.641611115606	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGTTAATCTCTTAGAT	-151820137	True	NA	NA	False	NA	NA	NA	151828441	151758294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_151758325_151801030_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
WTC11_00056148	chr2	-	428	3	FSM	ENSG00000162980.17	ENST00000495604.5	428	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAAGTTTTTGTTACTC	-151791780	False	NA	66	True	NA	NA	NA	151791790	151788983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151789248_151789751_151789883_151791757
WTC11_00056149	chr2	-	7962	9	NNC	ENSG00000162980.17	novel	1268	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_3	262.283243841462	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACTAGTTCTATGAT	-151820137	True	NA	-28	True	NA	NA	NA	151828441	151789077	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_151789248_151789751_151789883_151791757_151791909_151796570_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
WTC11_00056152	chr2	-	8470	27	NNC	ENSG00000196504.19	novel	8048	26	NA	NA	-595	-122	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_26	268.006347624201	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTGTGTCAGTTTTT	-152718492	False	NA	NA	False	AATAAA	-37	NA	152718592	152651714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663980_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229_152717626_152717830
WTC11_00056154	chr2	-	732	4	NNC	ENSG00000226383.7	novel	884	5	NA	NA	0	-72543	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	2.44948974278318	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254036	True	NA	NA	False	AATAAA	-28	NA	156254918	156095323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_156095820_156205381_156205439_156227966_156228005_156254777
WTC11_00056155	chr2	-	1126	1	FSM	ENSG00000213194.3	ENST00000434574.1	693	1	79	-512	79	512	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGCACACATTTGTAA	NA	False	NA	NA	False	AATAAA	-4	NA	157211460	157210334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157210300_157211500
WTC11_00056156	chr2	-	691	1	FSM	ENSG00000230562.3	ENST00000464802.1	691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTAACATTAAGAAAAATCA	NA	False	NA	NA	False	AAAAAG	-29	NA	157380414	157379723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157379700_157380400
WTC11_00056158	chr2	-	8708	41	Fusion	ENSG00000123636.19_ENSG00000226266.7	novel	8145	37	NA	NA	27	0	multi-exon	FALSE	canonical	2	4	junction_38	13.424580999048	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTTTTCTTAATG	-159711992	True	NA	0	True	AATAAA	-18	NA	159712403	159318978	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337566_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159430862_159431157_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159616241_159616602_159635184_159635324_159670707_159670811_159710716_159710895_159712313
WTC11_00056160	chr2	-	2365	14	NIC	ENSG00000123636.19	novel	8145	37	NA	NA	-18108	1756	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	11.0233748416448	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACGAATAAAGGTTAGT	-159453647	True	NA	NA	False	AAAAAG	-44	NA	159453661	159398842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448404_159453612
WTC11_00056162	chr2	-	2662	13	FSM	ENSG00000054219.11	ENST00000484559.1	2809	13	0	147	0	-147	multi-exon	FALSE	canonical	2	5	junction_4	5.02424676499429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGAAAATGGAATTTGG	-159904442	True	NA	NA	False	AATATA	-36	NA	159904742	159871965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159872594_159875443_159875644_159878323_159878494_159878632_159878722_159879258_159879370_159881082_159881241_159882123_159882316_159885152_159885294_159886419_159886531_159890212_159890378_159893913_159894085_159898687_159899060_159904588
WTC11_00056163	chr2	-	4222	15	NNC	ENSG00000153250.21	novel	4016	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_14	98.1497450275832	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160406405	True	NA	-4	True	AATAAA	-18	NA	160407882	160272150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160407463
WTC11_00056165	chr2	-	2040	19	ISM	ENSG00000197635.11	ENST00000676768.1	3623	25	-334	20790	7	2421	5prime_fragment	FALSE	canonical	3	10	junction_1	4.40713506783861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAAGTATTCAAGAGAA	-162074168	True	NA	NA	False	GATAAA	-27	NA	162074387	162014398	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047502_162073398_162073487_162073975
WTC11_00056166	chr2	-	3847	9	FSM	ENSG00000082438.18	ENST00000493868.5	6332	9	2485	0	-31	0	multi-exon	FALSE	canonical	2	4	junction_6	3.38193731461717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGGATATCTGCCTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	164722522	164684824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164686033_164692220_164692398_164694268_164695837_164699404_164699500_164700521_164700757_164704443_164704519_164704951_164705106_164722074_164722312_164722424
WTC11_00056167	chr2	-	8283	31	FSM	ENSG00000123607.16	ENST00000680888.1	8367	31	75	9	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	27.1723920347269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAACTGAGAAGTCTT	-165951277	True	NA	NA	False	TTTAAA	-13	NA	165953776	165857501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165857615_165858214_165858405_165870796_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
WTC11_00056168	chr2	-	8314	31	FSM	ENSG00000123607.16	ENST00000679967.1	8323	31	0	9	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	31.5213507888789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAACTGAGAAGTCTT	-165951317	True	NA	NA	False	TTTAAA	-13	NA	165953816	165857501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165857615_165858214_165858405_165870796_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898694_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
WTC11_00056169	chr2	-	12063	31	FSM	ENSG00000123607.16	ENST00000681024.1	12072	31	0	9	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	31.3479398578811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAACTGAGAAGTCTT	-165951322	True	NA	NA	False	TTTAAA	-13	NA	165953821	165857501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165857615_165858214_165858405_165870796_165874833_165876164_165879968_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
WTC11_00056170	chr2	-	1942	3	FSM	ENSG00000169432.19	ENST00000646694.1	2717	3	775	0	775	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTATTATTTATCTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	166204464	166198298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_166199865_166203954_166204226_166204359
WTC11_00056171	chr2	-	2624	13	ISM	ENSG00000169432.19	ENST00000409672.5	9768	27	69393	81639	-2511	-407	internal_fragment	FALSE	canonical	3	11	junction_6	4.36128803604317	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTTTGTATTAGTTTT	NA	False	NA	NA	False	AATACA	-21	NA	166306600	166276823	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_166277340_166278139_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509
WTC11_00056172	chr2	-	3295	19	NNC	ENSG00000198648.11	novel	3272	18	NA	NA	0	58572	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.0575043272118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCTGCTTCTCCATAA	-168247491	False	NA	NA	False	AAAAAG	-20	NA	168247595	167895447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_167895475_167954025_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168065318_168065382_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
WTC11_00056174	chr2	-	220	3	FSM	ENSG00000234350.6	ENST00000624287.1	594	3	68	306	3	-306	multi-exon	FALSE	canonical	1	1	junction_1	0.5	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAGAAATAAACTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	170727787	170726042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_170726090_170727284_170727329_170727658
WTC11_00056175	chr2	-	5606	22	NIC	ENSG00000198586.14	novel	4321	23	NA	NA	0	-193	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	54.4752330918204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAACACTCAC	-171160886	False	NA	NA	False	AATAAA	-14	NA	171160900	170991015	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
WTC11_00056179	chr2	-	8063	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-7	-1656	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	38.1590012316884	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGCATCGTCTTTCCT	-171432362	True	NA	0	True	AATAAA	-25	NA	171434094	171317401	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
WTC11_00056181	chr2	-	1432	9	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	21	-6	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	35.6771548052812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATTCAATTAAGTTAG	-171433707	True	NA	7	True	NA	NA	NA	171434759	171323906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171434673
WTC11_00056185	chr2	-	1792	12	NNC	ENSG00000138430.16	novel	4251	11	NA	NA	0	4176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.162331047318	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAGTACATCTTATA	-174238981	True	NA	NA	False	NA	NA	NA	174248599	174068270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174068305_174075006_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
WTC11_00056186	chr2	-	1945	10	NNC	ENSG00000138433.16	novel	1918	10	NA	NA	7	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.8831669756401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCTGTTTACATTTGG	-174393464	True	NA	NA	False	AATAAA	-44	NA	174395699	174347994	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380828_174381703_174381778_174387684_174387780_174395550
WTC11_00056187	chr2	-	584	4	FSM	ENSG00000138433.16	ENST00000377973.4	561	4	0	-23	0	23	multi-exon	FALSE	canonical	2	4	junction_1	77.3491363163732	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTTTGTGTACTTTCC	NA	False	NA	NA	False	NA	NA	NA	174380680	174358149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174358537_174378922_174379041_174380201_174380251_174380650
WTC11_00056188	chr2	-	681	7	FSM	ENSG00000138433.16	ENST00000461454.1	804	7	7	116	7	-116	multi-exon	FALSE	canonical	0	0	junction_4	71.0408724295779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACTAAGACCATTCC	-174393464	True	NA	NA	False	GGGGCT	-11	NA	174395699	174378802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
WTC11_00056189	chr2	-	1852	12	FSM	ENSG00000128656.15	ENST00000651501.1	1852	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	62.7308299386624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCTGTTAAATTAT	-175003775	True	NA	-12	True	AATAAA	-33	NA	175005364	174799494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175005205
WTC11_00056190	chr2	-	3952	13	NNC	ENSG00000115966.18	novel	4079	13	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_12	48.8407275403087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTCATAATTTGC	-175167819	False	NA	-15	True	AATAAA	-11	NA	175167865	175072264	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175167820
WTC11_00056191	chr2	-	2028	11	FSM	ENSG00000144320.14	ENST00000409660.5	2028	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	17.4725498997714	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTCTTGTTTGTAT	-176000470	True	NA	NA	False	TATAAA	-20	NA	176002274	175929172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175995557_175995647_176002159
WTC11_00056192	chr2	-	3003	1	FSM	ENSG00000280374.1	ENST00000624891.1	757	1	-2253	7	-2253	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACCAGTTTTAGCTAT	NA	False	NA	NA	False	AATAAA	-12	NA	177320724	177317721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177317700_177320700
WTC11_00056195	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	27.141987768032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	-178477799	True	NA	0	True	AATAAA	-25	NA	178478575	178465598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
WTC11_00056196	chr2	-	2060	12	NNC	ENSG00000163492.16	novel	6960	12	NA	NA	-1555	-11798	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	3.51619629196613	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGTAGGTCCATATCC	-179050574	True	NA	NA	False	NA	NA	NA	179051692	178884818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_178885093_178886751_178886872_178888526_178888669_178905328_178905502_178918712_178918908_178944534_178944652_178961229_178961484_178975056_178975166_178978483_178978676_179047283_179047407_179049839_179050067_179051558
WTC11_00056197	chr2	-	1340	7	ISM	ENSG00000144331.20	ENST00000410066.7	3395	10	256	4574	256	78	5prime_fragment	FALSE	canonical	0	0	junction_4	6.49144736471682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGTCACAGCTAGAGGC	-179861078	True	NA	NA	False	AAAAAG	-45	NA	179861356	179446555	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_179446771_179483271_179483435_179518527_179518639_179544826_179544970_179769502_179769803_179770520_179770673_179861100
WTC11_00056198	chr2	-	299	1	FSM	ENSG00000231203.1	ENST00000450021.1	1447	1	471	677	471	-677	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCATCAATGAGGTCAA	NA	False	NA	NA	False	NA	NA	NA	183072015	183071716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_183071700_183072000
WTC11_00056199	chr2	-	1251	5	FSM	ENSG00000237877.7	ENST00000667983.1	1598	5	347	0	16	0	multi-exon	FALSE	canonical	1	2	junction_2	4.24264068711928	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATAGCCTAAAAA	NA	False	NA	68	True	NA	NA	NA	186083893	186033539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_186033803_186038330_186038436_186039499_186039556_186081329_186081417_186083153
WTC11_00056201	chr2	-	6219	16	FSM	ENSG00000064989.13	ENST00000409998.5	5223	16	169	-1165	-38	0	multi-exon	TRUE	canonical	1	1	junction_4	3.18049611783375	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTTGCAAGTTTTTG	-187448159	True	NA	-16	True	TATAAA	-16	NA	187448291	187341963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187346400_187351919_187351962_187352113_187352333_187359062_187359130_187359211_187359273_187360597_187360752_187363375_187363503_187378939_187379032_187380466_187380580_187380676_187380788_187383172_187383306_187385544_187385632_187387328_187387494_187387665_187387757_187431296_187431365_187448038
WTC11_00056202	chr2	-	3810	8	FSM	ENSG00000003436.16	ENST00000233156.9	3859	8	49	0	-35	0	multi-exon	FALSE	canonical	3	19	junction_7	12.0169947684646	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	-187554375	False	NA	NA	False	AGTAAA	-24	NA	187554386	187464229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
WTC11_00056203	chr2	-	937	7	FSM	ENSG00000003436.16	ENST00000339091.8	1088	7	52	99	-35	-99	multi-exon	FALSE	canonical	2	5	junction_1	19.4565041966833	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTAATATTTGTGCTTT	-187554375	False	NA	NA	False	NA	NA	NA	187554386	187478683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
WTC11_00056206	chr2	-	4799	2	Genic_Genomic	ENSG00000003436.16	novel	804	5	NA	NA	166	-60965	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-187565581	False	NA	-5	True	AATAAA	-18	NA	187565594	187557980	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_187560874_187563688
WTC11_00056207	chr2	-	976	3	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	1.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATATATATATATAA	NA	False	NA	NA	False	AATAAA	-34	NA	187675988	187669641	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_187670022_187673666_187673945_187675670
WTC11_00056208	chr2	-	443	2	Antisense	novelGene_ENSG00000235616.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	18	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTCTCTGAATGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	187884258	187791566	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_187791911_187884159
WTC11_00056211	chr2	-	2437	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	305	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	416.478315762057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777011	False	7002	-15	True	AATAAA	-23	NA	189784013	189770322	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783403_189783878
WTC11_00056212	chr2	-	2916	4	ISM	ENSG00000128699.14	ENST00000392349.9	2150	5	323	56	302	0	3prime_fragment	FALSE	canonical	3	251	junction_3	329.983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777014	False	7002	-15	True	AATAAA	-23	NA	189784016	189770322	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013
WTC11_00056213	chr2	-	796	7	FSM	ENSG00000198130.16	ENST00000410045.5	854	7	58	0	48	0	multi-exon	FALSE	canonical	2	13	junction_6	183.93726285521	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCCGCATTTTTA	-190250440	False	NA	-112	True	NA	NA	NA	190250455	190205014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190250259
WTC11_00056216	chr2	-	377	3	FSM	ENSG00000138378.19	ENST00000463951.1	619	3	0	242	0	-242	multi-exon	FALSE	canonical	1	2	junction_1	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAATGTTAGTCACAT	NA	False	NA	NA	False	NA	NA	NA	191033607	191031449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_191031517_191032957_191033150_191033489
WTC11_00056217	chr2	-	2095	2	NNC	ENSG00000081320.11	novel	5273	8	NA	NA	20865	11902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAATGTGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	196135782	196121680	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_196121706_196133712
WTC11_00056218	chr2	-	3490	19	NNC	ENSG00000119041.11	novel	3818	19	NA	NA	0	46188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.6477962226078	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTATTTTAAACATTT	-196795903	True	NA	NA	False	NA	NA	NA	196799659	196716846	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_196716874_196763808_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
WTC11_00056219	chr2	-	9471	12	NIC	ENSG00000197121.15	novel	11090	27	NA	NA	206	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	16.1542154772663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGTAAAAAGATTGCTTA	NA	False	NA	-12	True	AATAAA	-17	NA	196873750	196833003	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_196841373_196842720_196842826_196843887_196844076_196844523_196844575_196845881_196846018_196847002_196847201_196847946_196848038_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684
WTC11_00056222	chr2	-	4302	26	NNC	ENSG00000115524.17	novel	8478	26	NA	NA	0	31372	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	416.8546490085	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAAAAAGTTCTAGG	-197398978	True	NA	NA	False	NA	NA	NA	197435027	197357142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197357176_197391976_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
WTC11_00056223	chr2	-	470	1	Genic_Genomic	ENSG00000213104.3	novel	NA	NA	NA	NA	961	239	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCGGTGGTCAGACGTG	NA	False	NA	NA	False	NA	NA	NA	197379931	197379461	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_197379500_197379900
WTC11_00056224	chr2	-	625	2	FSM	ENSG00000115524.17	ENST00000482158.1	772	2	0	147	0	-147	multi-exon	FALSE	canonical	3	1617	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTTTGTTTTTT	-197418786	False	NA	NA	False	NA	NA	NA	197418962	197416740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197416912_197418508
WTC11_00056225	chr2	-	2256	13	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	55487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3258.18492735347	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAGGAGGGGAAATCAG	-197499788	False	NA	NA	False	AAAAAG	-8	NA	197499817	197431096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431131_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00056226	chr2	-	2264	13	NNC	ENSG00000144381.18	novel	2510	13	NA	NA	0	34535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3258.18492735347	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGGTGTATGGAA	-197499788	False	NA	NA	False	AAAAAG	-18	NA	197499817	197452048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197452092_197486584_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00056227	chr2	-	2327	13	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	34535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3258.18492735347	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGGTGTATGGAA	-197466421	True	NA	NA	False	AAAAAG	-18	NA	197499879	197452048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197452092_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
WTC11_00056228	chr2	-	2023	9	FSM	ENSG00000144381.18	ENST00000678170.1	2022	9	0	-1	0	-1	multi-exon	FALSE	canonical	2	297	junction_6	3393.31740336798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	-197466434	True	NA	NA	False	AATAAA	-17	NA	197499892	197486584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197497139_197497393_197498674_197498851_197499781
WTC11_00056229	chr2	-	5419	9	FSM	ENSG00000162944.11	ENST00000295049.9	5419	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.71281680177634	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGTATCAAGGTGAG	-197675522	False	NA	NA	False	AATAAA	-25	NA	197675587	197568223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197572281_197595990_197596070_197615875_197615980_197617799_197617922_197631010_197631221_197633717_197633998_197644157_197644273_197646482_197646667_197675319
WTC11_00056230	chr2	-	1238	7	NIC	ENSG00000162971.11	novel	4287	8	NA	NA	2	-817	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	51.5776114220114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCTTTTCAACCAC	-199954072	True	NA	71	True	NA	NA	NA	199955498	199932715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199948336_199948473_199955392
WTC11_00056231	chr2	-	1445	13	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	22	-347	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	137.785662856804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTGCTGTTTATGTC	-201639274	True	NA	-12	True	NA	NA	NA	201642631	201624102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201634803_201634894_201636747_201636886_201638988_201639046_201640892_201640925_201642608
WTC11_00056236	chr2	-	4694	7	FSM	ENSG00000003393.16	ENST00000679427.1	6134	7	1440	0	1440	0	multi-exon	FALSE	canonical	3	106	junction_5	14.4452991200136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAACAGCAATTTTCAT	NA	False	NA	-41	True	ATTAAA	-25	NA	201711108	201700593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990
WTC11_00056237	chr2	-	1224	6	NNC	ENSG00000116030.17	novel	722	6	NA	NA	0	6265	intron_retention	FALSE	non_canonical	0	0	junction_1	1963.60896310849	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGCAAGGAGGAAGATG	-202201169	True	NA	NA	False	NA	NA	NA	202238566	202199916	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_202199950_202206482_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
WTC11_00056239	chr2	-	1190	1	FSM	ENSG00000273456.1	ENST00000607928.1	673	1	-502	-15	-502	15	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACATCTTCCATAATTAG	-202375784	True	NA	16	True	AATAAA	-33	NA	202376106	202374916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202374900_202376100
WTC11_00056240	chr2	-	497	2	FSM	ENSG00000163596.17	ENST00000476602.1	694	2	156	41	156	-41	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAATTAAGATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	202821600	202819645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202819900_202821357
WTC11_00056241	chr2	-	13880	11	NNC	ENSG00000114933.16	novel	14128	11	NA	NA	398	0	intron_retention	FALSE	canonical	2	3	junction_10	4.96487663492256	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-206084155	True	NA	-2	True	AATAAA	-16	NA	206085776	205993720	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085750
WTC11_00056242	chr2	-	14128	11	FSM	ENSG00000114933.16	ENST00000403263.6	14128	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	5.33010318849457	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-206085876	True	NA	-2	True	AATAAA	-16	NA	206086174	205993720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
WTC11_00056243	chr2	-	913	4	NIC	ENSG00000144401.14	novel	869	4	NA	NA	31	-5	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	270.648603666575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGCTAGTTGTATAT	-207625252	False	NA	-5	True	AATAAA	-19	NA	207625300	207581357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207581947_207621805_207621918_207624228_207624405_207625264
WTC11_00056244	chr2	-	2427	11	NNC	ENSG00000138413.14	novel	2318	10	NA	NA	-30	39794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1553.4979916305	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATATTCTGTGGAAGT	-208197623	True	NA	NA	False	AAAAAG	-10	NA	208255143	208196434	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_208196473_208236229_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
WTC11_00056245	chr2	-	201	4	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	5.24933858267454	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATCCTGACTGCAATTT	-209291023	False	NA	NA	False	NA	NA	NA	209291038	209256059	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_209256079_209271672_209271764_209280603_209280667_209291010
WTC11_00056246	chr2	-	954	1	NIC	ENSG00000144445.17	novel	4782	15	NA	NA	5274	-457	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGAGATTATAGAATT	NA	False	NA	NA	False	AATAGA	-27	NA	210024532	210023578	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_210023600_210024500
WTC11_00056249	chr2	-	946	5	FSM	ENSG00000138376.11	ENST00000619009.5	946	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	70.3753330365122	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	-214809575	False	NA	6	True	NA	NA	NA	214809597	214728552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_214729009_214730410_214730509_214792296_214792446_214797060_214797118_214809411
WTC11_00056250	chr2	-	1010	7	FSM	ENSG00000138376.11	ENST00000421162.2	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	65.2422834943379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATACCAGATGAACATT	-214809575	False	NA	-116	True	NA	NA	NA	214809597	214728674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214797060_214797118_214809411
WTC11_00056254	chr2	-	2277	6	NNC	ENSG00000118242.16	novel	3148	5	NA	NA	0	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.5932730352909	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGTATTTTGCCTTT	-216010684	True	NA	10	True	AATAAA	-44	NA	216013551	215942773	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_215943596_215944276_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
WTC11_00056255	chr2	-	1789	1	ISM	ENSG00000144583.5	ENST00000273067.5	4903	4	112827	3	112827	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTAGTGTCCCTTTCCAT	NA	False	NA	-5	True	AATAAA	-14	NA	216259656	216257867	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_216257900_216259700
WTC11_00056256	chr2	-	545	3	NNC	ENSG00000225062.1	novel	480	3	NA	NA	-22	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGAAGCCACCCAGCCT	-218367705	True	NA	-15	True	AATATA	-4	NA	218367857	218366676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_218366795_218366926_218367087_218367590
WTC11_00056257	chr2	-	10470	7	ISM	ENSG00000115568.16	ENST00000411696.7	11290	11	7237	10	7090	-10	3prime_fragment	FALSE	canonical	3	18	junction_6	11.2755881837219	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCAACCTCTGGGCT	-218652364	False	NA	-14	True	AATAAA	-25	NA	218652386	218633338	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218651700
WTC11_00056258	chr2	-	289	1	FSM	ENSG00000224928.2	ENST00000432100.1	650	1	115	246	115	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATGCAGAACGTGAGTA	-218953853	False	NA	NA	False	NA	NA	NA	218953935	218953646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218953600_218953900
WTC11_00056259	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	56.0904527427698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	-219156462	False	NA	-23	True	AATAAA	-30	NA	219158362	219075316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
WTC11_00056260	chr2	-	3872	17	NIC	ENSG00000198925.12	novel	3770	16	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	107.71867294021	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219225182	True	NA	-3	True	AATAAA	-18	NA	219229576	219219379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228483_219229009_219229175_219229534
WTC11_00056261	chr2	-	3888	17	NIC	ENSG00000198925.12	novel	4025	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	99.333383581503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219225197	True	NA	-5	True	AATAAA	-16	NA	219229591	219219381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009_219229175_219229534
WTC11_00056264	chr2	-	447	1	FSM	ENSG00000268603.1	ENST00000601508.1	636	1	55	134	55	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTTTGAATCTTCGT	-219498170	False	NA	NA	False	NA	NA	NA	219498191	219497744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219497700_219498200
WTC11_00056265	chr2	-	842	6	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	17635	-28	-892	0	3prime_fragment	FALSE	canonical	1	2	junction_5	59.1019458224516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-219553596	False	NA	-4	True	AATAAA	-15	NA	219553606	219550727	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535_219552698_219552867_219553025_219553573
WTC11_00056266	chr2	-	1991	4	ISM	ENSG00000124006.15	ENST00000456147.1	1571	5	345	0	345	0	3prime_fragment	FALSE	canonical	3	70	junction_2	29.9592315581618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTTGCCATGGGCAT	-219559074	False	NA	-1	True	TATAAA	-16	NA	219559086	219555762	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219556293_219556453_219556724_219557822_219558111_219558183
WTC11_00056267	chr2	-	407	2	FSM	ENSG00000116106.12	ENST00000463446.1	579	2	172	0	172	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCTGGGCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	221501172	221482439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_221482691_221501016
WTC11_00056268	chr2	-	862	1	FSM	ENSG00000203531.3	ENST00000444764.1	862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCTCCAGCTGCGACT	NA	False	NA	NA	False	NA	NA	NA	222699484	222698622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_222698600_222699500
WTC11_00056269	chr2	-	499	4	FSM	ENSG00000152056.17	ENST00000446015.6	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATGATGATGATGGTG	-223837456	False	NA	NA	False	NA	NA	NA	223837484	223765176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223765351_223775900_223776010_223777690_223777870_223837447
WTC11_00056271	chr2	-	2594	3	FSM	ENSG00000124019.10	ENST00000389874.3	2594	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	224401994	224378697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224380209_224400380_224400506_224401036
WTC11_00056272	chr2	-	560	1	FSM	ENSG00000228446.2	ENST00000440417.2	714	1	115	39	115	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAAATTGTGGAAGGC	-224499948	False	NA	NA	False	AAGAAA	-43	NA	224499985	224499425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224499400_224500000
WTC11_00056273	chr2	-	3037	9	FSM	ENSG00000236432.8	ENST00000656771.1	3037	9	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	4.68874983337776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCTGTCTCAAAAAAAG	-227325216	False	NA	NA	False	NA	NA	NA	227325226	227236689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227238175_227259177_227259284_227264668_227265439_227265838_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
WTC11_00056288	chr2	-	1334	12	NIC	ENSG00000132323.9	novel	1455	12	NA	NA	66	-4	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	63.4992028322449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCTAGTCTTTTGA	-238199879	False	NA	-14	True	AATAAA	-11	NA	238203572	238170412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189862_238189973_238194274_238194332_238194781_238194871_238203498
WTC11_00056289	chr2	-	311	3	FSM	ENSG00000132323.9	ENST00000490837.1	557	3	0	246	0	-246	multi-exon	FALSE	canonical	2	13	junction_1	95	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGCAGAAAAATCTGCT	-238200002	True	NA	NA	False	NA	NA	NA	238203695	238194654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238194703_238194804_238194871_238203498
WTC11_00056291	chr2	-	6282	23	FSM	ENSG00000132326.12	ENST00000254657.8	6380	23	98	0	98	0	multi-exon	FALSE	canonical	0	0	junction_22	1.82498726362588	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTTGTATGTATTTT	-238288093	False	419	-6	True	AATAAA	-16	NA	238288512	238244043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238246525_238249061_238249213_238250550_238250744_238251598_238251762_238252911_238253703_238255656_238255912_238256921_238257087_238258275_238258401_238258496_238258645_238259968_238260054_238260827_238260954_238261728_238261838_238262190_238262345_238262951_238263059_238265511_238265591_238268055_238268199_238268922_238268975_238271311_238271514_238273069_238273192_238275742_238275898_238277130_238277194_238277706_238277956_238288348
WTC11_00056308	chr2	+	258	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCGACAGAGCGAGACT	NA	False	NA	NA	False	NA	NA	NA	10355165	10355423	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_10355200_10355400
WTC11_00056309	chr2	+	498	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAGGAGATTCAGCATA	NA	False	NA	NA	False	TATAAA	-43	NA	16792234	16792732	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_16792200_16792700
WTC11_00056310	chr2	+	213	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTAACCATGTCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	16793907	16794120	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_16793900_16794100
WTC11_00056311	chr2	+	267	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGTAGTAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	38082079	38082346	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_38082100_38082300
WTC11_00056312	chr2	+	1281	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGATGCGCCTAGTCCC	NA	False	NA	NA	False	NA	NA	NA	62194441	62195722	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_62194400_62195700
WTC11_00056313	chr2	+	974	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTGCCTCAAAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	68128288	68129262	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_68128300_68129300
WTC11_00056314	chr2	+	1494	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTATTTATACATATT	NA	False	NA	NA	False	AATATA	-8	NA	130123858	130125352	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_130123900_130125400
WTC11_00056315	chr2	+	3076	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTTTCCACAATTAAA	131211922	False	NA	NA	False	TTTAAA	-34	NA	131211949	131215025	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_131211900_131215000
WTC11_00056316	chr2	+	409	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTTATAGAGGAAA	148649218	False	NA	NA	False	NA	NA	NA	148649232	148649641	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_148649200_148649600
WTC11_00056317	chr2	+	281	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCCAACGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	154869454	154869735	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_154869500_154869700
WTC11_00056319	chr2	+	1092	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACAAGAAAATTCATG	157378469	False	NA	NA	False	NA	NA	NA	157378517	157379609	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_157378500_157379600
WTC11_00056320	chr2	+	1364	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCATGTGCAATTAAT	164462174	False	NA	-12	True	AATAAA	-7	NA	164462187	164463551	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164462200_164463600
WTC11_00056321	chr2	+	203	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTGCAATGATGAAACA	165715122	False	NA	NA	False	NA	NA	NA	165715138	165715341	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_165715100_165715300
WTC11_00056322	chr2	+	7544	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGAAGCAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	187633297	187640841	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187633300_187640800
WTC11_00056323	chr2	+	2532	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGCAAGATATAGCAACA	NA	False	NA	NA	False	NA	NA	NA	187645179	187647711	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187645200_187647700
WTC11_00056324	chr2	+	225	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTGCAAGGCCGAGCT	199248371	False	NA	NA	False	NA	NA	NA	199248382	199248607	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_199248400_199248600
WTC11_00056325	chr2	+	221	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTCCAAACAACTTGAC	209302560	False	NA	NA	False	NA	NA	NA	209302573	209302794	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_209302600_209302800
WTC11_00056326	chr20	+	2752	1	FSM	ENSG00000247315.4	ENST00000500893.4	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCACTATTTCCTTTC	290702	True	NA	20	True	AATAAA	-25	NA	297569	300321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_297600_300300
WTC11_00056327	chr20	+	2300	2	Genic_Genomic	ENSG00000177732.9	novel	4673	1	NA	NA	-128	-1495	multi-exon	FALSE	canonical	2	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCCTGTGGTTCTGCA	325253	False	NA	16	True	AATAAA	-16	NA	325423	328729	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_+_326931_327936
WTC11_00056328	chr20	+	4800	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	-128	1	-128	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTCTCATTGTCTGTT	325253	False	NA	16	True	AATAAA	-16	NA	325423	330223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_325400_330200
WTC11_00056329	chr20	+	3200	5	NNC	ENSG00000125841.13	novel	2074	5	NA	NA	-247	0	intron_retention	FALSE	canonical	3	13	junction_2	110.082639412398	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTGTTTCCTTT	NA	False	NA	5	True	AATAAA	-13	NA	346534	354861	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_347143_347433_348064_349248_349364_349637_349833_353209
WTC11_00056330	chr20	+	2172	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	-138	-1188	-37	0	multi-exon	FALSE	canonical	3	30	junction_2	68.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	346380	True	NA	12	True	AATAAA	-20	NA	346744	354868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_347143_349248_349364_353209
WTC11_00056331	chr20	+	2360	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	-279	7	-37	0	multi-exon	FALSE	canonical	3	167	junction_1	33.0689515339624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTGTTTCCTTT	346380	True	NA	5	True	AATAAA	-13	NA	346744	354861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_347143_349248_349364_349637_349833_353209
WTC11_00056335	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.0213499897497	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	380744	False	NA	NA	False	AATAAA	-18	NA	380759	397559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_381170_388010_388302_391286_391580_396197
WTC11_00056337	chr20	+	584	5	FSM	ENSG00000125826.21	ENST00000411647.5	593	5	9	0	9	0	multi-exon	FALSE	canonical	2	3	junction_1	61.1734215162108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCGGCAGAATGGGGAC	407440	False	NA	NA	False	NA	NA	NA	407506	417822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_407672_408690_408780_409880_410026_417525_417620_417731
WTC11_00056338	chr20	+	1321	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	-267	-30	-12	30	multi-exon	FALSE	canonical	3	13	junction_1	47.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCAATAGTTTTATGGT	407845	True	NA	56	True	NA	NA	NA	408037	410794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409829_410026_410411
WTC11_00056339	chr20	+	2632	11	FSM	ENSG00000125826.21	ENST00000415942.5	2613	11	-19	0	-16	0	multi-exon	FALSE	canonical	3	54	junction_6	31.1069124150887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	407841	True	NA	8	True	ATTAAA	-16	NA	408033	430966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
WTC11_00056340	chr20	+	1213	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	-13	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	32.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	407144	True	NA	26	True	AATAAA	-19	NA	408064	410764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_410411
WTC11_00056341	chr20	+	3680	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	21	0	-21	multi-exon	FALSE	canonical	3	59	junction_6	31.9356274013939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCTGCTTCTCTTGAAA	406651	True	NA	NA	False	ATTAAA	-7	NA	408298	432118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
WTC11_00056342	chr20	+	2511	11	FSM	ENSG00000125826.21	ENST00000353660.7	2511	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	42.0286806835523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	408120	False	NA	8	True	ATTAAA	-16	NA	408170	430966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
WTC11_00056344	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406695	False	NA	26	True	AATAAA	-19	NA	408342	410764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_410411
WTC11_00056346	chr20	+	1486	4	FSM	ENSG00000125826.21	ENST00000468272.1	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	422132	False	NA	8	True	ATTAAA	-16	NA	422153	430966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_422239_427312_427493_428490_429095_430349
WTC11_00056347	chr20	+	2782	2	NNC	ENSG00000125898.13	novel	1614	2	NA	NA	-345	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCTTCAGACTCTTC	840886	False	NA	9	True	AATAAA	-23	NA	840929	846279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_842140_844707
WTC11_00056348	chr20	+	1766	2	FSM	ENSG00000125898.13	ENST00000541082.2	1614	2	-154	2	-154	0	multi-exon	FALSE	canonical	3	70	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	841005	False	NA	7	True	AATAAA	-21	NA	841120	846277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_841317_844707
WTC11_00056349	chr20	+	640	3	FSM	ENSG00000125818.18	ENST00000478004.1	632	3	-8	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	309.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGAGTGCCTAGC	1109711	True	NA	NA	False	NA	NA	NA	1118601	1135306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1118903_1125497_1125651_1135120
WTC11_00056350	chr20	+	8160	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	-6	0	-2	0	multi-exon	FALSE	canonical	3	576	junction_6	34.1402336775183	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	1109705	True	NA	NA	False	ATTAAA	-23	NA	1118595	1172246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
WTC11_00056351	chr20	+	2044	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	45	junction_6	221.092300986614	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	1109705	True	NA	20	True	AATAAA	-24	NA	1118595	1167328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
WTC11_00056352	chr20	+	4030	4	FSM	ENSG00000125818.18	ENST00000484891.1	4030	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	25.3902868567227	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGGTGAAGTGCCAT	1134815	False	NA	10	True	AATAAA	-20	NA	1134839	1168378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1135307_1163129_1163184_1164317_1164477_1165028
WTC11_00056353	chr20	+	613	1	FSM	ENSG00000215388.3	ENST00000431775.1	1114	1	-17	518	-17	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAGCGGGAGATCATGC	NA	False	NA	NA	False	NA	NA	NA	1160566	1161179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1160600_1161200
WTC11_00056354	chr20	+	5012	6	FSM	ENSG00000101298.15	ENST00000381873.7	4995	6	-20	3	2	0	multi-exon	TRUE	canonical	2	8	junction_5	2.03960780543711	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCCTTGGCCTGTTTTC	1265939	True	NA	11	True	ATTAAA	-16	NA	1266295	1309325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1266398_1266653_1266761_1296324_1296422_1297144_1297253_1300561_1300712_1304877
WTC11_00056355	chr20	+	4068	9	FSM	ENSG00000198053.12	ENST00000400068.7	4201	9	133	0	133	0	multi-exon	FALSE	canonical	3	10	junction_1	14.6351460532514	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCGGTGTTCAGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	1894299	1939894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
WTC11_00056356	chr20	+	4418	9	FSM	ENSG00000198053.12	ENST00000622179.4	4570	9	0	152	0	-152	multi-exon	FALSE	canonical	3	5	junction_8	18.0190871022924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCTGTAATATCCTTG	1894233	False	NA	NA	False	NA	NA	NA	1894507	1940440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934767_1937319
WTC11_00056357	chr20	+	4381	8	FSM	ENSG00000198053.12	ENST00000358771.5	4580	8	-499	698	125	0	multi-exon	FALSE	canonical	3	34	junction_3	8.34706351885231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCGGTGTTCAGTAT	1894596	True	NA	NA	False	AATAAA	-20	NA	1894907	1939894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
WTC11_00056358	chr20	+	6469	4	FSM	ENSG00000125834.13	ENST00000381482.8	6469	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	49.8018295067784	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	2101261	True	NA	49	True	AATAAA	-43	NA	2101826	2148555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2102176_2102767_2103366_2116665_2117416_2143783
WTC11_00056359	chr20	+	6226	3	ISM	ENSG00000125834.13	ENST00000381482.8	6469	4	835	0	-229	0	3prime_fragment	FALSE	canonical	3	93	junction_1	20.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	2101690	True	NA	49	True	AATAAA	-43	NA	2102661	2148555	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_2103366_2116665_2117416_2143783
WTC11_00056360	chr20	+	541	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	-5	0	5	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207198	False	NA	3	True	ATTAAA	-14	NA	2207221	2213151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2207520_2212908
WTC11_00056364	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	236.043524491873	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2645934	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
WTC11_00056365	chr20	+	2081	12	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	365	junction_1	242.002356384949	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTTCATGTTCTTTA	2645944	True	NA	12	True	AATAAA	-14	NA	2652641	2658391	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
WTC11_00056370	chr20	+	2980	1	FSM	ENSG00000101361.17	ENST00000612233.1	2980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTCATGTTCTTTAT	2655401	False	NA	13	True	AATAAA	-15	NA	2655412	2658392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2655400_2658400
WTC11_00056371	chr20	+	2662	2	FSM	ENSG00000101361.17	ENST00000616692.1	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655503	False	NA	14	True	AATAAA	-16	NA	2655546	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656896_2657080
WTC11_00056372	chr20	+	1143	5	FSM	ENSG00000101361.17	ENST00000492135.5	1143	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	281.20855250152	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655931	False	NA	14	True	AATAAA	-16	NA	2655945	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
WTC11_00056373	chr20	+	1108	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	43	junction_5	381.236094828389	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656083	False	NA	14	True	AATAAA	-16	NA	2656096	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
WTC11_00056375	chr20	+	745	2	FSM	ENSG00000101361.17	ENST00000467857.1	735	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	1150	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656657	False	NA	14	True	AATAAA	-16	NA	2656938	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2657219_2657928
WTC11_00056376	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_10	18.074514951645	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839607	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
WTC11_00056377	chr20	+	2871	22	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	8	-2	intron_retention	FALSE	canonical	3	85	junction_10	17.5081451728129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCTTGTCTTACACA	2839633	True	NA	20	True	AATAAA	-13	NA	2840770	2866730	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862935_2863064_2863101_2863289_2863399_2863948_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
WTC11_00056379	chr20	+	634	5	FSM	ENSG00000215305.10	ENST00000487461.1	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	13.0647426304539	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTTGCAGCCAAGGTT	2863357	False	NA	NA	False	NA	NA	NA	2863370	2865038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2863399_2863948_2864288_2864364_2864463_2864546_2864655_2864977
WTC11_00056381	chr20	+	3733	23	FSM	ENSG00000132670.21	ENST00000216877.10	3725	23	-8	0	0	0	multi-exon	FALSE	canonical	3	383	junction_13	56.7276551560536	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGAATTGTTCCCAT	2868253	True	NA	NA	False	GATAAA	-19	NA	2873480	3039076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
WTC11_00056382	chr20	+	3284	22	NIC	ENSG00000132670.21	novel	3353	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_2	93.3087917199923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868252	True	NA	4	True	AATAAA	-17	NA	2873479	3038669	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
WTC11_00056383	chr20	+	3324	23	NNC	ENSG00000132670.21	novel	3353	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_20	109.665984239296	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868252	True	NA	4	True	AATAAA	-17	NA	2873479	3038669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035792_3035942_3037153_3037290_3038058
WTC11_00056384	chr20	+	3281	22	NNC	ENSG00000132670.21	novel	3353	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_19	131.508516058537	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868252	True	NA	4	True	AATAAA	-17	NA	2873479	3038669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035792_3035942_3037153_3037290_3038058
WTC11_00056385	chr20	+	2904	20	NIC	ENSG00000132670.21	novel	3353	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_12	116.074386312807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868252	True	NA	4	True	AATAAA	-17	NA	2873479	3038669	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
WTC11_00056386	chr20	+	3354	24	FSM	ENSG00000132670.21	ENST00000399903.7	3353	24	-1	0	-1	0	multi-exon	FALSE	canonical	3	38	junction_5	131.694080401719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868252	True	NA	4	True	AATAAA	-17	NA	2873479	3038669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
WTC11_00056387	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_3	70.6179077068196	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3028829	True	NA	26	True	AATAAA	-17	NA	3046051	3048250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
WTC11_00056390	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	95.8208362156229	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	3203319	True	NA	24	True	AATAAA	-21	NA	3209497	3223860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
WTC11_00056391	chr20	+	982	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	-15	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	265.374839718379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203319	True	NA	34	True	AATAAA	-31	NA	3209497	3223870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
WTC11_00056392	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	241.43852219561	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203346	True	NA	34	True	AATAAA	-31	NA	3209524	3223870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
WTC11_00056394	chr20	+	3216	2	FSM	ENSG00000125877.13	ENST00000472295.1	670	2	-2556	10	-2556	0	multi-exon	FALSE	canonical	3	810	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	3219177	False	NA	24	True	AATAAA	-21	NA	3219196	3223860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3221918_3223365
WTC11_00056395	chr20	+	8675	29	FSM	ENSG00000088812.18	ENST00000262919.10	8651	29	-24	0	-24	0	multi-exon	FALSE	canonical	2	18	junction_28	17.8472829922115	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTTGTTCTGAGTG	3469794	True	NA	12	True	AATAAA	-18	NA	3470993	3651118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3624510_3624573_3634310_3634390_3638827_3638936_3644153_3644269_3646722
WTC11_00056396	chr20	+	4146	25	FSM	ENSG00000088812.18	ENST00000446916.2	3921	25	-114	-111	-24	111	multi-exon	FALSE	canonical	3	48	junction_2	10.2740233382816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTGTTATTCCTTT	3469794	True	NA	NA	False	ATTAAA	-12	NA	3470993	3616058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3615827
WTC11_00056397	chr20	+	3135	13	FSM	ENSG00000132622.11	ENST00000254963.7	3133	13	-4	2	-4	-2	multi-exon	FALSE	canonical	3	26	junction_12	5.60257877132387	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGCCTGCTGATAT	3732153	True	NA	9	True	AATAAA	-19	NA	3732680	3753109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3732795_3738657_3738718_3740814_3740913_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
WTC11_00056399	chr20	+	2817	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	21	-878	21	0	multi-exon	FALSE	canonical	3	24	junction_1	22.3620710629007	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795231	True	NA	30	True	AATAAA	-21	NA	3795759	3806115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
WTC11_00056400	chr20	+	3087	15	FSM	ENSG00000101224.18	ENST00000340833.4	1978	15	-212	-897	-72	0	multi-exon	FALSE	canonical	1	5	junction_5	30.4289906074414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795690	False	NA	30	True	AATAAA	-21	NA	3796218	3806115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
WTC11_00056401	chr20	+	3138	16	FSM	ENSG00000101224.18	ENST00000245960.10	3119	16	-19	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	21.0328843058251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795762	False	NA	30	True	AATAAA	-21	NA	3796290	3806115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
WTC11_00056402	chr20	+	2756	14	NNC	ENSG00000101224.18	novel	807	9	NA	NA	-1366	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	25.1793566240283	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCATTGTGTCCTGTG	3799503	True	NA	28	True	AATAAA	-19	NA	3799704	3806113	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_3799946_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
WTC11_00056403	chr20	+	4640	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	-7	739	4	-739	multi-exon	FALSE	canonical	3	12	junction_2	4	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCAGTTAACCGTGT	3820252	True	NA	NA	False	TTTAAA	-21	NA	3820539	3828099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3820759_3822101_3822294_3823870
WTC11_00056405	chr20	+	11733	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	51	junction_3	11.2051575426477	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	3844178	True	NA	12	True	AATAAA	-23	NA	3846831	3876118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
WTC11_00056406	chr20	+	11563	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	33	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_2	27.4619737091128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	3844178	True	NA	17	True	AATAAA	-28	NA	3846831	3876123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
WTC11_00056407	chr20	+	11686	8	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	-2	476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.3548115381136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCTCCTGGCTC	3844178	True	NA	NA	False	NA	NA	NA	3846831	3876599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682_3868759_3869286
WTC11_00056408	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	129.931605940288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	3888691	True	NA	NA	False	NA	NA	NA	3888838	3926958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00056409	chr20	+	1481	7	NIC	ENSG00000125779.24	novel	4815	7	NA	NA	18	-70	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	155.472041073485	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTCTGCAAAATTAATTG	3888709	True	NA	-95	True	AAAACA	-13	NA	3888856	3923785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3888905_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00056412	chr20	+	8484	7	FSM	ENSG00000125779.24	ENST00000316562.9	8484	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	77.0203796984207	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTGTGATTGCAAAAA	3888775	False	NA	10	True	AATAAA	-22	NA	3888922	3929887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00056413	chr20	+	1527	7	NIC	ENSG00000125779.24	novel	8484	7	NA	NA	1	-58	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.244191807671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGGGCAGGTTAATT	3888787	False	NA	-83	True	AAAACA	-25	NA	3888934	3923797	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3889017_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00056414	chr20	+	1845	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.27176759917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3880997	True	NA	-25	True	NA	NA	NA	3889386	3923855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00056415	chr20	+	1675	6	NIC	ENSG00000125779.24	novel	8484	7	NA	NA	21	111	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	124.863765760928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCTGTGTGTGAACTT	3881020	True	NA	NA	False	NA	NA	NA	3889409	3923742	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3889729_3907925_3908279_3910576_3910831_3916926_3917051_3918670_3918797_3923243
WTC11_00056418	chr20	+	534	1	FSM	ENSG00000226608.3	ENST00000427242.1	528	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTATGAGCCCAGCGA	NA	False	NA	NA	False	NA	NA	NA	4023910	4024444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4023900_4024400
WTC11_00056419	chr20	+	507	1	FSM	ENSG00000226608.3	ENST00000427242.1	528	1	168	-147	168	147	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4024084	4024591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4024100_4024600
WTC11_00056420	chr20	+	2218	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	-54	0	-5	0	multi-exon	FALSE	canonical	3	58	junction_1	7.6029964853047	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148200	True	NA	22	True	AATAAA	-25	NA	4148773	4187727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
WTC11_00056421	chr20	+	2076	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_5	21.0964742193997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	4148203	True	NA	42	True	AATAAA	-45	NA	4148776	4187747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
WTC11_00056422	chr20	+	2609	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	-72	2	-72	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4686231	False	NA	14	True	ATTAAA	-20	NA	4686277	4701588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686509_4699210
WTC11_00056423	chr20	+	2814	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	-242	2	-49	0	multi-exon	FALSE	canonical	3	40	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4686254	False	NA	14	True	ATTAAA	-20	NA	4686300	4701588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686737_4699210
WTC11_00056424	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4684339	True	NA	14	True	ATTAAA	-20	NA	4686455	4701588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686513_4699210
WTC11_00056425	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	20.2601140722905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	5125541	True	NA	NA	False	AATAAA	-17	NA	5127007	5197887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
WTC11_00056426	chr20	+	2654	11	FSM	ENSG00000101290.14	ENST00000468817.5	2706	11	-1	53	0	-53	multi-exon	FALSE	canonical	2	2	junction_1	104.919969500567	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAGATCGCACCACTGC	5125541	True	NA	NA	False	NA	NA	NA	5127007	5187826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5127150_5128149_5128751_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686
WTC11_00056427	chr20	+	3093	14	NIC	ENSG00000101290.14	novel	9076	13	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	92.6805929399047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTAAATGTAGTTTGT	5126861	False	NA	24	True	ATTAAA	-24	NA	5127052	5191348	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_5127150_5128149_5128751_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
WTC11_00056428	chr20	+	820	1	FSM	ENSG00000233578.1	ENST00000422311.1	642	1	-138	-40	-138	40	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCAAGTCAAGCAATCGA	NA	False	NA	NA	False	NA	NA	NA	5548701	5549521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5548700_5549500
WTC11_00056429	chr20	+	593	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	24	junction_2	30.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	5749581	True	NA	7	True	AATAAA	-18	NA	5750384	5773447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5750480_5772861_5773044_5773131
WTC11_00056430	chr20	+	1638	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	-5	0	3	0	multi-exon	FALSE	canonical	3	34	junction_2	25.5	2753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5749592	True	NA	NA	False	AATAAA	-15	NA	5750395	5864395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5750480_5772861_5773044_5863023
WTC11_00056431	chr20	+	2558	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	-104	8	-104	-8	multi-exon	FALSE	canonical	2	5	junction_2	5.97390157267426	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGACCAAAAGCTT	5911203	True	NA	NA	False	AATAAA	-5	NA	5911405	5925345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
WTC11_00056432	chr20	+	7494	19	FSM	ENSG00000125885.13	ENST00000610722.4	7486	19	-8	0	-8	0	multi-exon	FALSE	canonical	3	5	junction_1	13.6585341656986	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAACAAAAACTGAGC	5950208	True	NA	NA	False	ATTAAA	-15	NA	5950643	5998977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
WTC11_00056435	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	97.8309199020887	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	5998046	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
WTC11_00056439	chr20	+	3631	3	FSM	ENSG00000125845.7	ENST00000378827.5	3545	3	-55	-31	-55	31	multi-exon	FALSE	canonical	2	5	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCATTTGTATAGC	6767613	False	NA	33	True	TATAAA	-18	NA	6767630	6780277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6768876_6770119_6770473_6778244
WTC11_00056440	chr20	+	3082	8	FSM	ENSG00000182621.18	ENST00000629992.2	3095	8	13	0	13	0	multi-exon	FALSE	canonical	2	2	junction_1	14.8461497791618	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTCTGAATTTAC	8132128	True	NA	NA	False	AATAAA	-14	NA	8132282	8653531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8132751_8150293_8150372_8371381_8371451_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8651412
WTC11_00056441	chr20	+	1138	7	FSM	ENSG00000182621.18	ENST00000404098.6	1260	7	-10	132	0	-132	multi-exon	FALSE	canonical	2	2	junction_1	15.8052382315344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTGGTACCAAGAGG	8132361	False	NA	NA	False	AAAACA	-10	NA	8132515	8649857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8132751_8150293_8150372_8371381_8371451_8628293_8628432_8646101_8646182_8647899_8647954_8649373
WTC11_00056442	chr20	+	560	6	FSM	ENSG00000182621.18	ENST00000628900.1	560	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	17.2348484182484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAGCCTCGCCAGAAA	8600289	True	NA	NA	False	AAAACA	-38	NA	8600714	8658682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8658537
WTC11_00056443	chr20	+	297	1	NIC	ENSG00000182621.18	novel	1819	6	NA	NA	13919	-1105	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGCACTCTTCAGATG	NA	False	NA	NA	False	NA	NA	NA	8750946	8751243	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_8750900_8751200
WTC11_00056444	chr20	+	5352	38	NIC	ENSG00000101333.19	novel	5191	38	NA	NA	-166	3	combination_of_known_junctions	TRUE	canonical	2	5	junction_10	8.07552009691304	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTAAAACACGCAT	9068166	False	NA	-15	True	ATTAAA	-17	NA	9068638	9480455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_9068904_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893_9339038_9362895_9362976_9365460_9365515_9371213_9371296_9372302_9372404_9380053_9380163_9384200_9384412_9387462_9387557_9389878_9389959_9390530_9390616_9393587_9393679_9395522_9395619_9401489_9401591_9405312_9405349_9407916_9408059_9408632_9408718_9409056_9409182_9411036_9411089_9419806_9419910_9421296_9421462_9423747_9423953_9435559_9435649_9437001_9437153_9443980_9444031_9444177_9444244_9453346_9453463_9457413_9457490_9459634_9459811_9468570_9468673_9472789_9472848_9473278_9473366_9476716_9476754_9478920
WTC11_00056447	chr20	+	5807	36	ISM	ENSG00000101333.19	ENST00000686976.1	5274	39	238687	-746	0	-26	3prime_fragment	FALSE	canonical	3	12	junction_17	6.61846520219401	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAAAGTAACTCAGTGT	NA	False	NA	NA	False	AAGAAA	-11	NA	9307799	9481216	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_9307899_9337125_9337207_9338007_9338068_9338893_9339038_9362895_9362976_9365460_9365515_9371213_9371296_9372302_9372404_9373046_9373105_9380053_9380163_9384200_9384412_9387462_9387557_9389878_9389959_9390530_9390616_9393587_9393679_9395522_9395619_9401489_9401591_9407916_9408059_9408632_9408718_9409056_9409182_9411036_9411089_9419806_9419910_9421296_9421462_9423747_9423953_9435559_9435649_9437001_9437153_9443980_9444031_9444177_9444244_9453346_9453463_9457413_9457490_9459634_9459811_9468570_9468673_9472789_9472848_9473278_9473366_9476716_9476754_9478920
WTC11_00056448	chr20	+	5401	11	FSM	ENSG00000132623.16	ENST00000378392.6	5429	11	21	7	21	-7	multi-exon	FALSE	canonical	3	7	junction_1	18.495675170158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATACGTGTTAATTG	10033485	True	NA	1	True	AATACA	-13	NA	10035007	10058296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10035334_10035578_10035643_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
WTC11_00056449	chr20	+	5299	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	4	0	-4	multi-exon	FALSE	canonical	3	31	junction_4	11.6279781795121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACGTGTTAATTGATT	10033526	True	NA	4	True	AATACA	-16	NA	10035048	10058299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
WTC11_00056451	chr20	+	2540	1	Genic_Genomic	ENSG00000149346.15	novel	NA	NA	NA	NA	26860	44	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAATGCATATTCAAA	NA	False	NA	45	True	AAAACA	-13	NA	10625534	10628074	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_+_10625500_10628100
WTC11_00056452	chr20	+	4610	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	62	14	-32	0	multi-exon	FALSE	canonical	3	159	junction_3	25.9169346181218	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCCTTTAGTGCTT	11890774	False	NA	15	True	AATAAA	-14	NA	11890784	11926595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
WTC11_00056454	chr20	+	5134	5	FSM	ENSG00000132640.15	ENST00000405977.5	5137	5	-11	14	0	0	multi-exon	FALSE	canonical	3	26	junction_1	71.8100793760876	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCCTTTAGTGCTT	11886151	True	NA	15	True	AATAAA	-14	NA	11890816	11926595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11890955_11917777_11918602_11919085_11919177_11919717_11919837_11922633
WTC11_00056456	chr20	+	848	1	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAGGGATTGGGGC	NA	False	NA	NA	False	NA	NA	NA	12344055	12344903	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12344100_12344900
WTC11_00056458	chr20	+	3311	3	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	340.5	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACCAGAGCTTAACT	NA	False	NA	30	True	ATTAAA	-36	NA	12753770	12762745	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756266_12756426_12760245
WTC11_00056459	chr20	+	4746	2	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	748	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTGTATTTATACCA	12736324	True	NA	20	True	ATTAAA	-26	NA	12754169	12762735	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12756426_12760245
WTC11_00056460	chr20	+	7134	2	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	205	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACCAGAGCTTAACT	NA	False	NA	30	True	ATTAAA	-36	NA	12753770	12762745	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756263
WTC11_00056461	chr20	+	5187	3	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTGTTTTGATTTC	12753703	False	NA	16	True	AATAAA	-23	NA	12754154	12765641	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12756426_12760245_12760364_12762843
WTC11_00056462	chr20	+	587	2	FSM	ENSG00000172296.13	ENST00000476791.1	2480	2	5	1888	-3	-1888	multi-exon	FALSE	canonical	1	1	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATGCGCACCTCCCT	13008907	True	NA	NA	False	AATAGA	-38	NA	13008983	13049130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13009385_13048944
WTC11_00056463	chr20	+	1344	3	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACATACTGCATGATTC	NA	False	NA	49	True	NA	NA	NA	13357878	13362691	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_13358479_13359226_13359511_13362231
WTC11_00056464	chr20	+	3982	2	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCGCATGAAAGAATACATA	13357997	True	NA	38	True	NA	NA	NA	13358028	13362680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_13358479_13359148
WTC11_00056465	chr20	+	1210	1	FSM	ENSG00000236811.1	ENST00000432206.1	998	1	-31	-181	-31	181	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCCTGCGCTCAGC	NA	False	NA	NA	False	NA	NA	NA	13392645	13393855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13392600_13393900
WTC11_00056467	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	36.3938510835857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	13784983	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
WTC11_00056468	chr20	+	1071	9	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	57.1899248119807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGGATCATTGTATT	13783471	True	NA	12	True	AATAAA	-24	NA	13785042	13803421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13801817_13801874_13803149
WTC11_00056469	chr20	+	1102	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	39.1821387879733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783471	True	NA	14	True	AATAAA	-18	NA	13785042	13817228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
WTC11_00056472	chr20	+	951	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	-18	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	43.5430821141545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783498	True	NA	14	True	AATAAA	-18	NA	13785069	13817228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
WTC11_00056474	chr20	+	570	3	FSM	ENSG00000101247.18	ENST00000479682.5	676	3	106	0	106	0	multi-exon	FALSE	canonical	3	134	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13816159	False	NA	14	True	AATAAA	-18	NA	13816170	13817228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13816547_13816874_13816958_13817117
WTC11_00056475	chr20	+	4336	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	-12	-3219	-5	3219	multi-exon	FALSE	canonical	3	12	junction_2	4.89897948556636	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCATTTTTCTCA	13994903	True	NA	NA	False	ATTAAA	-18	NA	13995489	14056898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
WTC11_00056476	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	388.094239700732	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	16712173	True	NA	12	True	AATAAA	-17	NA	16729960	16741776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
WTC11_00056477	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_1	398.899075233601	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	16712238	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
WTC11_00056478	chr20	+	2517	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	-664	0	-657	0	multi-exon	FALSE	canonical	3	43	junction_1	905.915283014919	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	17569407	False	NA	19	True	AATAAA	-19	NA	17569417	17608242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
WTC11_00056479	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	1982	junction_2	160.37941125829	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	17556672	True	NA	8	True	AATAAA	-20	NA	17570074	17609919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
WTC11_00056480	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	45.2071620431984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968039	False	NA	NA	False	AATAAA	-22	NA	17969017	17991122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
WTC11_00056481	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	230.104867397454	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963895	True	NA	NA	False	AATAAA	-22	NA	17969072	17991122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
WTC11_00056482	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963937	False	NA	NA	False	AATAAA	-22	NA	17969114	17991122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970371_17989938
WTC11_00056483	chr20	+	1894	3	FSM	ENSG00000125871.14	ENST00000467391.1	740	3	-263	-891	-237	0	multi-exon	FALSE	canonical	3	49	junction_1	254.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17969704	False	NA	NA	False	AATAAA	-22	NA	17969793	17991122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17970371_17988165_17988299_17989938
WTC11_00056484	chr20	+	1165	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	517	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	18131734	True	NA	12	True	AATAAA	-18	NA	18137848	18143169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138052_18142207
WTC11_00056485	chr20	+	3920	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	7	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	107.371364897723	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	18131734	True	NA	22	True	AATAAA	-24	NA	18137848	18188374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
WTC11_00056487	chr20	+	4067	11	FSM	ENSG00000149474.15	ENST00000676935.1	4067	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	46.8765399747038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	18138084	True	NA	35	True	AATAAA	-37	NA	18138107	18188387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
WTC11_00056488	chr20	+	2238	4	NIC	ENSG00000125846.16	novel	2642	5	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	12.657891697365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18286946	True	NA	17	True	AATAAA	-23	NA	18288515	18316994	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315068
WTC11_00056489	chr20	+	2664	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	-11	1	5	1	multi-exon	FALSE	canonical	1	3	junction_3	17.3557547292598	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCTGTGTCCCTCAT	18286946	True	NA	18	True	AATAAA	-24	NA	18288515	18316995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
WTC11_00056490	chr20	+	2370	5	NIC	ENSG00000125846.16	novel	2717	6	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	18.3507493035026	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTAACTGTGCCTGTG	18286975	True	NA	10	True	AATAAA	-16	NA	18288544	18316987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315071
WTC11_00056491	chr20	+	2167	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	-14	3	-13	0	multi-exon	FALSE	canonical	3	97	junction_7	8.78119439484174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	18465620	True	NA	NA	False	AATAAA	-18	NA	18467375	18484643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
WTC11_00056493	chr20	+	2072	10	NNC	ENSG00000132664.12	novel	2156	9	NA	NA	67	-18	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	46.4255676684016	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTTGTTGATAAACC	18465759	False	NA	NA	False	NA	NA	NA	18467514	18484625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_18467569_18468943_18469062_18471303_18471366_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
WTC11_00056494	chr20	+	457	1	FSM	ENSG00000214612.3	ENST00000415286.1	434	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAAACCATGCTGGGT	18504598	False	NA	NA	False	NA	NA	NA	18504609	18505066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18504600_18505100
WTC11_00056495	chr20	+	3458	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	6	0	6	0	multi-exon	FALSE	canonical	3	348	junction_1	97.0557426148254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18507515	False	NA	NA	False	AATATA	-19	NA	18507525	18561415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
WTC11_00056497	chr20	+	3030	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	-7	3	0	-3	multi-exon	FALSE	canonical	3	338	junction_1	98.8923979443877	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTATTTTTATTT	18498951	True	NA	NA	False	AATATA	-16	NA	18507932	18561412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
WTC11_00056498	chr20	+	3428	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	-385	308	0	-15	multi-exon	FALSE	canonical	3	26	junction_1	161.299518368899	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGATTTCCTGAGGTCT	18507113	True	NA	30	True	AATAAA	-41	NA	18507554	18561107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
WTC11_00056500	chr20	+	575	2	FSM	ENSG00000232388.5	ENST00000435844.3	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	1201	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTTTCTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	18567346	18569563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18567597_18569238
WTC11_00056501	chr20	+	506	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	451	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	18557859	True	NA	12	True	AATAAA	-18	NA	18567415	18569560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18567597_18569235
WTC11_00056502	chr20	+	1881	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	2072	0	-2072	multi-exon	FALSE	canonical	3	651	junction_5	26.7058046124808	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTACTTCAAATGATAATA	18577839	True	NA	NA	False	NA	NA	NA	18588053	18764572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
WTC11_00056503	chr20	+	1539	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGGCCTTTGTTTA	18794357	False	NA	13	True	AATAAA	-25	NA	18794528	18796067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18794500_18796100
WTC11_00056504	chr20	+	4450	17	FSM	ENSG00000185052.13	ENST00000328041.11	3922	17	-546	18	-546	-18	multi-exon	FALSE	canonical	3	16	junction_6	4.67707173346743	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGCATTACTTTCTC	19212085	False	NA	26	True	AATAAA	-27	NA	19212095	19722908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_19212985_19280958_19281088_19515487_19515565_19579999_19580075_19584970_19585056_19585440_19585545_19654061_19654137_19665863_19665890_19673600_19673655_19681857_19681992_19684175_19684337_19685099_19685362_19693258_19693426_19696796_19696912_19698567_19698681_19717527_19717594_19720990
WTC11_00056505	chr20	+	1819	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	-141	-758	-141	732	multi-exon	FALSE	canonical	3	22	junction_4	279.930683384298	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTACTTTGGTGGAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	20017168	20034387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
WTC11_00056506	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	299.897795090261	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010153	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
WTC11_00056507	chr20	+	1055	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	-41	26	11	0	multi-exon	FALSE	canonical	3	581	junction_2	62.6469472520409	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010115	True	NA	32	True	TATAAA	-35	NA	20017320	20033629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
WTC11_00056508	chr20	+	2844	1	FSM	ENSG00000173404.5	ENST00000310227.3	2846	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCCTGATTTCTG	20367967	True	NA	4	True	AATAAA	-18	NA	20368105	20370949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20368100_20370900
WTC11_00056509	chr20	+	277	1	FSM	ENSG00000235065.1	ENST00000421023.1	475	1	156	42	156	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAAGTTTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	21114878	21115155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21114900_21115200
WTC11_00056510	chr20	+	2010	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	-2	6	-2	-2	multi-exon	FALSE	canonical	0	0	junction_2	48.2347907772213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATCCTGTGTTAATAT	21120903	True	NA	NA	False	AATAAA	-14	NA	21126004	21246616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
WTC11_00056511	chr20	+	1887	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	-14	2	0	-2	multi-exon	FALSE	canonical	1	5	junction_2	49.1456000065113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATCCTGTGTTAATAT	21120936	True	NA	NA	False	AATAAA	-14	NA	21126037	21246616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
WTC11_00056513	chr20	+	2119	14	NNC	ENSG00000088970.16	novel	2102	13	NA	NA	0	54831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	45.1098593245869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGGCTCACAGAATCAAA	21120980	True	NA	NA	False	NA	NA	NA	21126081	21301453	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478_21246617_21301430
WTC11_00056515	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_5	69.6090150926163	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284189	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
WTC11_00056516	chr20	+	392	1	FSM	ENSG00000227063.5	ENST00000484902.1	81	1	-47	-264	-47	264	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCACCTCTTCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	21755222	21755614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21755200_21755600
WTC11_00056517	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	23347083	True	NA	13	True	AATACA	-14	NA	23350790	23354771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23351062_23353980
WTC11_00056518	chr20	+	4837	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	-20	17	-20	0	multi-exon	FALSE	canonical	3	47	junction_5	8.97552226892675	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCATTTTTGGGAAACAA	23360588	True	NA	NA	False	AATAAA	-17	NA	23362161	23373045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
WTC11_00056519	chr20	+	675	2	FSM	ENSG00000125812.16	ENST00000461789.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATATTAAAGTCCACAC	23363645	False	NA	NA	False	NA	NA	NA	23365218	23368907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23365748_23368761
WTC11_00056520	chr20	+	390	2	FSM	ENSG00000125812.16	ENST00000477239.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAGCAACATGGAATAA	23367297	False	NA	NA	False	NA	NA	NA	23368870	23370421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23368930_23370090
WTC11_00056521	chr20	+	2523	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	-442	11	-442	-11	multi-exon	FALSE	canonical	3	15	junction_1	8.52447456836295	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGAATAGCTGTCG	24469091	True	NA	34	True	NA	NA	NA	24469186	24666605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
WTC11_00056522	chr20	+	1184	9	ISM	ENSG00000197586.13	ENST00000354989.9	2708	14	-120	8115	-120	0	5prime_fragment	TRUE	canonical	3	86	junction_1	80.7975865976206	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGACATGTTGCCCC	NA	False	NA	NA	False	NA	NA	NA	25195572	25218614	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549
WTC11_00056523	chr20	+	2776	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	-10	0	-2	0	multi-exon	FALSE	canonical	3	89	junction_2	68.5488430066549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190622	True	NA	28	True	AATAAA	-29	NA	25195690	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00056524	chr20	+	2731	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	-23	0	-23	0	multi-exon	FALSE	canonical	3	86	junction_1	68.2292515658113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00056525	chr20	+	4115	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	-21	10	-2	-10	multi-exon	FALSE	canonical	3	73	junction_2	71.3073614426895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGATAGAACGTGTCC	25190622	True	NA	NA	False	NA	NA	NA	25195690	25228065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00056530	chr20	+	2654	14	FSM	ENSG00000197586.13	ENST00000433259.6	2654	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	98.6309840056215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190688	True	NA	28	True	AATAAA	-29	NA	25195756	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225161_25225318_25225498
WTC11_00056535	chr20	+	2100	11	FSM	ENSG00000197586.13	ENST00000376666.3	2100	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	80.8197995543171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25213323	False	NA	28	True	AATAAA	-29	NA	25213339	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
WTC11_00056537	chr20	+	2588	4	FSM	ENSG00000197586.13	ENST00000485936.5	2588	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	27.8567765543682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25221780	False	NA	28	True	AATAAA	-29	NA	25221791	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00056539	chr20	+	1918	2	FSM	ENSG00000197586.13	ENST00000490187.1	1918	2	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25224619	False	NA	28	True	AATAAA	-29	NA	25224630	25226729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25225318_25225498
WTC11_00056540	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_16	21.8268177318447	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	25246187	True	NA	33	True	ATTAAA	-24	NA	25248084	25298012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
WTC11_00056541	chr20	+	726	3	FSM	ENSG00000100994.12	ENST00000471359.1	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	12.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCAGGAGGGGCCATG	25293886	False	NA	NA	False	NA	NA	NA	25293900	25296636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25294293_25295603_25295671_25296369
WTC11_00056542	chr20	+	3326	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	526	junction_4	28.0455977928008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398154	True	NA	24	True	AATAAA	-24	NA	25407657	25448563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
WTC11_00056543	chr20	+	583	5	FSM	ENSG00000101003.10	ENST00000484893.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	283.515872571537	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTAGCATTGTTCAAG	25398227	True	NA	NA	False	NA	NA	NA	25407730	25418195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25407896_25411123_25411287_25413789_25413855_25417103_25417203_25418104
WTC11_00056544	chr20	+	647	1	FSM	ENSG00000278383.1	ENST00000611460.1	466	1	-211	30	-211	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACGAAATAAATGTCTGT	NA	False	NA	NA	False	NA	NA	NA	25680569	25681216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25680600_25681200
WTC11_00056545	chr20	+	3479	9	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-64394	7325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.17416319979	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTTGCTAAGCACAA	NA	False	NA	9	True	AATAAA	-37	NA	30312977	30406582	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_30312989_30377181_30377722_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398046_30404267
WTC11_00056546	chr20	+	3979	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	-43	-4	4	4	multi-exon	FALSE	canonical	3	743	junction_2	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTTAAATATTTTCTC	31501563	True	NA	12	True	ATTAAA	-22	NA	31514413	31541737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178
WTC11_00056547	chr20	+	1615	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	-9	0	9	0	multi-exon	TRUE	canonical	3	640	junction_4	65.4784047423523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501568	True	NA	49	True	ATTAAA	-42	NA	31514418	31569567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
WTC11_00056548	chr20	+	1598	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	-13	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	291.711651292848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	31501591	True	NA	-24	True	AAGAAA	-11	NA	31514441	31569444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
WTC11_00056549	chr20	+	1482	11	NIC	ENSG00000101294.18	novel	1715	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_10	176.486146765122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501591	True	NA	25	True	ATTAAA	-18	NA	31514441	31569543	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31569119
WTC11_00056550	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	284.874485031956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501591	True	NA	25	True	ATTAAA	-18	NA	31514441	31569543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
WTC11_00056562	chr20	+	384	1	FSM	ENSG00000278276.1	ENST00000611296.1	325	1	105	-164	105	164	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGGGCCTGAGAACAC	31580938	False	NA	NA	False	NA	NA	NA	31580994	31581378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31581000_31581400
WTC11_00056563	chr20	+	1303	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	-70	0	-70	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	31605201	False	NA	17	True	ATTAAA	-24	NA	31605212	31606515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31605200_31606500
WTC11_00056564	chr20	+	989	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	-6	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	31596260	True	NA	12	True	ATTAAA	-19	NA	31605282	31606510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31605814_31606052
WTC11_00056565	chr20	+	1760	1	FSM	ENSG00000281376.1	ENST00000629058.1	1903	1	148	-5	148	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAAAGTGGCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	31721654	31723414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31721700_31723400
WTC11_00056566	chr20	+	3490	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	-19	2	0	-2	multi-exon	FALSE	canonical	3	807	junction_1	80.692247176078	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATTGTGTTATTTGA	31720969	True	NA	18	True	AATAAA	-18	NA	31739270	31801798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
WTC11_00056567	chr20	+	1182	1	FSM	ENSG00000278012.1	ENST00000616850.1	651	1	-534	3	-534	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGGTTGCCTTTTTACC	31969274	False	NA	5	True	ATTAAA	-20	NA	31969646	31970828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31969600_31970800
WTC11_00056568	chr20	+	2223	7	NNC	ENSG00000101331.17	novel	2599	10	NA	NA	8394	7777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.4511613362176	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGAAAAACACTTCCCCA	32018693	True	NA	NA	False	AGTAAA	-23	NA	32018843	32039957	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000_32032175_32039943
WTC11_00056569	chr20	+	3878	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	-110	0	-110	0	multi-exon	FALSE	canonical	3	222	junction_1	30.1738904985762	5341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	32109593	True	NA	13	True	AATAAA	-17	NA	32109603	32167256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
WTC11_00056570	chr20	+	566	6	FSM	ENSG00000101337.16	ENST00000442842.5	563	6	-3	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	141.523708261196	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCACCCGGCTGGAGCTC	32103309	True	NA	-40	True	NA	NA	NA	32109713	32141785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32136876_32136998_32141496_32141666_32141765
WTC11_00056571	chr20	+	805	1	FSM	ENSG00000275576.1	ENST00000611964.1	459	1	-361	15	-361	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATTTTCAGTTTCCTG	32109405	False	NA	-9	True	AATAAA	-2	NA	32115809	32116614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32115800_32116600
WTC11_00056572	chr20	+	2174	3	FSM	ENSG00000101337.16	ENST00000495749.1	3023	3	849	0	849	0	multi-exon	FALSE	canonical	3	287	junction_2	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTGAATCTCATGC	32159978	False	NA	15	True	AATAAA	-19	NA	32159991	32167258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32160112_32161275_32161366_32165294
WTC11_00056573	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	5.79511288357124	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	32204673	True	NA	28	True	AATAAA	-42	NA	32207879	32238658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
WTC11_00056574	chr20	+	959	6	FSM	ENSG00000101346.14	ENST00000486717.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.5989010878424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTGTGAAGCGGGA	32204728	True	NA	NA	False	NA	NA	NA	32207934	32234568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32208066_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
WTC11_00056576	chr20	+	6113	9	FSM	ENSG00000101350.8	ENST00000375712.4	6116	9	3	0	3	0	multi-exon	FALSE	canonical	3	40	junction_1	4.56720647661128	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCCTCATAAATGACTA	32276371	True	NA	21	True	AATAAA	-31	NA	32277653	32335011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32277766_32309712_32311182_32316217_32316320_32316526_32316650_32316755_32316875_32326770_32326885_32327555_32327662_32330140_32330320_32331222
WTC11_00056577	chr20	+	7545	11	NIC	ENSG00000171456.21	novel	7052	13	NA	NA	-26	0	intron_retention	FALSE	canonical	3	25	junction_2	10.9128364782031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTCTCAGTCATCTG	32358290	False	NA	3	True	AATAAA	-16	NA	32358303	32439319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_32358833_32366383_32366467_32369014_32369124_32428127_32428249_32428324_32428423_32429337_32430054_32431320_32431485_32431582_32431680_32432879_32432986_32433283_32433918_32434431
WTC11_00056578	chr20	+	1097	7	FSM	ENSG00000171456.21	ENST00000644587.1	1076	7	-21	0	-6	0	multi-exon	FALSE	canonical	1	4	junction_4	18.8392321145706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTAAACTCATGGTT	32357343	False	NA	NA	False	NA	NA	NA	32358337	32429431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32358833_32366383_32366467_32369014_32369124_32371777_32371875_32428127_32428249_32428324_32428423_32429337
WTC11_00056579	chr20	+	7023	12	NIC	ENSG00000171456.21	novel	7052	13	NA	NA	0	2	intron_retention	FALSE	canonical	3	25	junction_2	12.0439964812212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCAGTCATCTGTG	32357364	False	NA	5	True	AATAAA	-18	NA	32358358	32439321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_32358833_32366383_32366467_32369014_32369124_32428127_32428249_32428324_32428423_32429337_32429432_32429900_32430054_32431320_32431485_32431582_32431680_32432879_32432986_32433283_32433918_32434431
WTC11_00056582	chr20	+	8056	4	FSM	ENSG00000171456.21	ENST00000647223.1	8056	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTTGTCAGAGCCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	32428763	32438415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32431485_32431582_32431680_32432879_32432986_32433283
WTC11_00056584	chr20	+	4336	23	FSM	ENSG00000088305.18	ENST00000328111.6	4336	23	0	0	0	0	multi-exon	FALSE	canonical	3	1247	junction_1	326.140418093265	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707443	True	NA	23	True	ATTAAA	-16	NA	32762384	32809356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
WTC11_00056585	chr20	+	4048	20	FSM	ENSG00000088305.18	ENST00000348286.6	4048	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	572.018605745092	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707482	True	NA	23	True	ATTAAA	-16	NA	32762423	32809356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
WTC11_00056586	chr20	+	4237	22	FSM	ENSG00000088305.18	ENST00000353855.6	4237	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	483.314989095939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707482	True	NA	23	True	ATTAAA	-16	NA	32762423	32809356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
WTC11_00056589	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_3	113.811857417797	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	32797887	True	NA	19	True	AATAAA	-20	NA	32819953	32850405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
WTC11_00056590	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	32856606	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32856600_32858800
WTC11_00056591	chr20	+	1857	5	ISM	ENSG00000078699.22	ENST00000342704.11	7344	11	-39	25780	-18	296	5prime_fragment	TRUE	canonical	3	128	junction_4	17.3997126413053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAATTTATTACAG	33486122	True	NA	NA	False	AGTAAA	-12	NA	33490056	33624250	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114
WTC11_00056592	chr20	+	7363	11	FSM	ENSG00000078699.22	ENST00000342704.11	7344	11	-19	0	2	0	multi-exon	FALSE	canonical	3	70	junction_9	32.1280251493925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCAAGCTGGAAT	33486142	True	NA	18	True	AATAAA	-15	NA	33490076	33650030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
WTC11_00056593	chr20	+	7633	12	FSM	ENSG00000078699.22	ENST00000375279.6	7617	12	-21	5	0	0	multi-exon	FALSE	canonical	2	5	junction_1	49.0863634259064	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTCAAGCTGGAATG	33486161	True	NA	19	True	AATAAA	-16	NA	33490095	33650031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33490302_33573973_33574262_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
WTC11_00056594	chr20	+	846	1	FSM	ENSG00000149609.6	ENST00000607738.1	2254	1	-329	1737	-329	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCCCAATAAAGAGTGCG	NA	False	NA	NA	False	TTTAAA	-15	NA	33663036	33663882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33663000_33663900
WTC11_00056595	chr20	+	1759	1	FSM	ENSG00000288649.2	ENST00000677665.1	1583	1	-81	-95	-81	95	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGTGAAAGTCACCAG	33666847	False	NA	123	True	ACTAAA	-1	NA	33666861	33668620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33666900_33668600
WTC11_00056596	chr20	+	3328	15	FSM	ENSG00000131061.14	ENST00000342427.6	3661	15	333	0	-6	0	multi-exon	FALSE	canonical	3	39	junction_6	15.1832345778131	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	33731028	True	NA	13	True	AATAAA	-19	NA	33731989	33792269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757323_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
WTC11_00056597	chr20	+	3349	15	FSM	ENSG00000131061.14	ENST00000375200.6	3343	15	-6	0	-6	0	multi-exon	FALSE	canonical	3	36	junction_6	15.7895922838367	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	33731028	True	NA	13	True	AATAAA	-19	NA	33731989	33792269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
WTC11_00056598	chr20	+	3144	14	FSM	ENSG00000131061.14	ENST00000497876.5	3140	14	-6	2	0	-2	multi-exon	FALSE	canonical	2	6	junction_2	25.5685642790115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGGGTGGCCTGGGCCA	33731034	True	NA	11	True	AATAAA	-17	NA	33731995	33792267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
WTC11_00056599	chr20	+	3142	3	FSM	ENSG00000131061.14	ENST00000493497.1	3240	3	96	2	96	-2	multi-exon	FALSE	canonical	3	58	junction_2	17.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGGGTGGCCTGGGCCA	NA	False	NA	11	True	AATAAA	-17	NA	33787183	33792267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33788975_33789517_33789589_33790987
WTC11_00056600	chr20	+	1602	5	FSM	ENSG00000101421.4	ENST00000217402.3	1602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTTGTGTTTAATC	33799464	True	NA	28	True	ATTAAA	-21	NA	33811347	33854366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33811659_33848466_33848645_33850951_33851067_33852076_33852204_33853495
WTC11_00056601	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	426.874030013539	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33993582	False	NA	14	True	AATAAA	-21	NA	33993645	34084884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
WTC11_00056602	chr20	+	1204	7	FSM	ENSG00000125970.12	ENST00000448364.5	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	643.194307085088	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGACTGTATCATAT	33993186	False	NA	NA	False	NA	NA	NA	33993679	34076039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34065043_34065161_34072065_34072331_34073562_34073636_34073818_34073867_34075873
WTC11_00056603	chr20	+	6213	10	FSM	ENSG00000125970.12	ENST00000246194.8	6213	10	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_5	132.681834234391	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33989813	True	NA	14	True	AATAAA	-21	NA	33993910	34084884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
WTC11_00056606	chr20	+	671	6	FSM	ENSG00000078747.16	ENST00000486883.5	703	6	32	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	18.4021737846375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTACCTTTTTAA	34358752	True	NA	NA	False	NA	NA	NA	34363272	34413879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34363350_34369393_34369471_34393769_34393882_34408650_34408793_34412514_34412640_34413741
WTC11_00056608	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.98478974846513	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	34358752	True	NA	NA	False	NA	NA	NA	34363272	34511773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
WTC11_00056609	chr20	+	1394	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	-22	92	0	-92	multi-exon	FALSE	canonical	0	0	junction_2	259.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTCTTGTGTTCAC	34505623	True	NA	NA	False	AATAAA	-33	NA	34516421	34531129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34516462_34526267_34526344_34529851
WTC11_00056610	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	97.6740611535234	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505623	True	NA	38	True	ACTAAA	-18	NA	34516421	34540958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
WTC11_00056611	chr20	+	983	4	FSM	ENSG00000101460.13	ENST00000360668.8	964	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	70	junction_2	6.64997911442	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557635	True	NA	15	True	AATAAA	-22	NA	34558698	34560345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735
WTC11_00056612	chr20	+	717	5	FSM	ENSG00000101460.13	ENST00000397709.1	698	5	-19	0	-19	0	multi-exon	FALSE	canonical	2	4	junction_4	33.1247641501038	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557635	True	NA	15	True	AATAAA	-22	NA	34558698	34560345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735_34559906_34560171
WTC11_00056613	chr20	+	4001	4	FSM	ENSG00000078804.13	ENST00000374809.6	4018	4	12	5	1	-2	multi-exon	FALSE	canonical	2	3	junction_1	2.44948974278318	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATCCTTTCTGCCTGAG	34704191	False	NA	13	True	AATAAA	-16	NA	34704350	34713434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34704513_34708690_34708864_34709235_34709525_34710057
WTC11_00056614	chr20	+	1578	6	FSM	ENSG00000131069.20	ENST00000476922.5	1527	6	-51	0	-1	0	multi-exon	FALSE	canonical	1	3	junction_2	48.3470785053244	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGACTTGTTTTCTTAG	34874819	True	NA	18	True	AATAAA	-18	NA	34876570	34927962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34876824_34882793_34882990_34923322_34923432_34925697_34925767_34926876_34926952_34927086
WTC11_00056615	chr20	+	2907	18	FSM	ENSG00000131069.20	ENST00000360596.7	2885	18	-22	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	12.8975199461465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	34874838	True	NA	15	True	AATAAA	-15	NA	34876589	34927959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
WTC11_00056617	chr20	+	670	5	FSM	ENSG00000131069.20	ENST00000494727.1	1030	5	360	0	360	0	multi-exon	FALSE	canonical	3	85	junction_3	15.3846514422654	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGAACATGATCCTG	NA	False	NA	NA	False	NA	NA	NA	34923201	34927205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
WTC11_00056618	chr20	+	1508	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	-159	0	-159	0	multi-exon	FALSE	canonical	3	155	junction_1	7.76029781788188	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	35171853	False	NA	28	True	AATAAA	-19	NA	35171912	35177362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
WTC11_00056619	chr20	+	4376	9	FSM	ENSG00000125966.10	ENST00000246186.8	4376	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.06573218223437	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCATTTCCCTGGGAT	35226678	False	NA	NA	False	AATAAA	-14	NA	35226689	35276998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35226985_35246839_35246989_35251904_35252022_35254449_35254755_35263790_35263953_35267204_35267420_35269759_35269899_35271568_35271836_35274271
WTC11_00056620	chr20	+	566	4	FSM	ENSG00000126001.16	ENST00000476146.5	550	4	-16	0	10	0	multi-exon	FALSE	canonical	1	1	junction_1	18.4932420089069	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGGCGTGAACACCC	35452942	True	NA	NA	False	NA	NA	NA	35455184	35462304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35455517_35458303_35458375_35459982_35460106_35462264
WTC11_00056621	chr20	+	8349	35	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	0	393	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.098197056945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGAACTTGCCAAA	35452958	True	NA	77	True	NA	NA	NA	35455200	35512033	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35455517_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870_35478102_35479230_35479425_35479645_35479774_35479975_35480146_35490636_35490805_35491211_35491347_35493428_35493573_35494523_35494658_35496576_35496716_35497718_35498068_35498594_35498717_35500048_35500170_35501844_35501967_35502389_35505006_35507737_35507852_35508034_35508191_35508942_35509045_35509997_35510055_35511362
WTC11_00056624	chr20	+	789	7	FSM	ENSG00000125991.21	ENST00000447986.5	1632	7	0	843	0	-39	multi-exon	FALSE	canonical	3	656	junction_1	76.8564679559675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCATTTGTCTTGG	35532204	True	NA	NA	False	NA	NA	NA	35542068	35548940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807
WTC11_00056625	chr20	+	1362	14	FSM	ENSG00000125991.21	ENST00000357394.8	1357	14	-6	1	-6	0	multi-exon	FALSE	canonical	1	1	junction_7	318.048412823281	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGGTCTCCGTGTGA	35542001	True	NA	28	True	GATAAA	-23	NA	35542031	35557633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35554371_35554387_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
WTC11_00056627	chr20	+	1311	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	-9	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	84.1263517309265	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35532204	True	NA	29	True	GATAAA	-24	NA	35542068	35557634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
WTC11_00056630	chr20	+	1310	12	ISM	ENSG00000125991.21	ENST00000348547.7	1302	13	127	2	13	-1	3prime_fragment	FALSE	canonical	3	790	junction_9	63.1770436390878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCACTGGTCTCCGTGTG	35532340	False	NA	27	True	GATAAA	-22	NA	35542204	35557632	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
WTC11_00056634	chr20	+	765	3	FSM	ENSG00000125991.21	ENST00000488384.1	766	3	0	1	0	0	multi-exon	FALSE	canonical	3	908	junction_2	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGGTCTCCGTGTGA	35556581	False	NA	28	True	GATAAA	-23	NA	35556609	35557633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35557110_35557193_35557250_35557424
WTC11_00056635	chr20	+	320	1	FSM	ENSG00000222460.1	ENST00000410528.1	320	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCAGGCAGGGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	35643142	35643462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35643100_35643500
WTC11_00056636	chr20	+	494	3	FSM	ENSG00000125995.16	ENST00000374078.5	498	3	0	4	0	0	multi-exon	FALSE	canonical	3	882	junction_1	1532.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35699249	False	NA	16	True	AATAAA	-17	NA	35699271	35700980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699452_35699632_35699764_35700797
WTC11_00056637	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1885	junction_1	1031	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681936	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699457_35699632_35699764_35700797
WTC11_00056638	chr20	+	208	1	FSM	ENSG00000225357.3	ENST00000424137.2	906	1	214	484	214	-484	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAATATTTGCTGGTG	NA	False	NA	NA	False	AGTAAA	-21	NA	35753027	35753235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35753000_35753200
WTC11_00056639	chr20	+	5902	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	-23	0	18	0	multi-exon	FALSE	canonical	3	166	junction_13	29.9511713353562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	35766683	True	NA	10	True	AATAAA	-18	NA	35771991	35950370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
WTC11_00056640	chr20	+	639	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	-21	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	35766703	True	NA	11	True	AATAAA	-22	NA	35772011	35775058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35774487
WTC11_00056641	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	76.1715088824693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766717	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
WTC11_00056642	chr20	+	1835	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	-40	19	12	0	multi-exon	FALSE	canonical	3	25	junction_1	79.9088323503936	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766677	True	NA	NA	False	AATAAA	-43	NA	35771985	35913316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
WTC11_00056643	chr20	+	467	4	NNC	ENSG00000025293.17	novel	832	6	NA	NA	12	21505	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	123.036579926459	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766736	True	NA	NA	False	AATAAA	-14	NA	35772044	35823477	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_35772080_35801490_35801606_35812622_35812720_35823257
WTC11_00056645	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	35954392	True	NA	4	True	AATAAA	-17	NA	35954706	35955368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35954700_35955400
WTC11_00056646	chr20	+	5875	19	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-134	-4	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	26.6238661150777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTCCTTGGCACCTCT	36153132	True	NA	23	True	AATAAA	-18	NA	36154605	36232795	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00056647	chr20	+	6207	20	NNC	ENSG00000088367.23	novel	8418	25	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	35.6223652862532	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGCACCTCTCCTC	36154533	True	NA	27	True	AATAAA	-22	NA	36154575	36232799	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194214_36194361_36197858_36198042_36209487_36209899_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00056648	chr20	+	763	6	FSM	ENSG00000088367.23	ENST00000373945.5	763	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	26.5887194125629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGGTGCCAGCCAGG	36153268	False	NA	NA	False	NA	NA	NA	36154741	36185335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116
WTC11_00056649	chr20	+	803	8	FSM	ENSG00000088367.23	ENST00000451082.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	25.9599377377323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGGGTAGCAACCGTT	36190746	False	NA	NA	False	NA	NA	NA	36190764	36221944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863
WTC11_00056651	chr20	+	2440	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	-23	0	-4	0	multi-exon	FALSE	canonical	3	133	junction_1	52.6265670128269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232900	True	NA	29	True	ATTAAA	-19	NA	36236454	36256933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
WTC11_00056652	chr20	+	2863	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	324	0	-4	0	multi-exon	FALSE	canonical	3	8	junction_1	116.279834881204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232900	True	NA	17	True	ATTAAA	-7	NA	36236454	36256921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
WTC11_00056653	chr20	+	2584	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	-23	0	-4	0	multi-exon	FALSE	canonical	3	10	junction_1	115.770246609394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232900	True	NA	17	True	ATTAAA	-7	NA	36236454	36256921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
WTC11_00056654	chr20	+	2960	4	FSM	ENSG00000131043.13	ENST00000679667.1	2952	4	-8	0	-2	0	multi-exon	FALSE	canonical	3	14	junction_1	108.324615033806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232902	True	NA	17	True	ATTAAA	-7	NA	36236456	36256921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36237038_36239820_36240626_36244696_36244927_36255577
WTC11_00056655	chr20	+	2877	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	-14	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	110.203851515675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	36232915	True	NA	18	True	ATTAAA	-8	NA	36236469	36256922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
WTC11_00056656	chr20	+	5070	13	FSM	ENSG00000080845.19	ENST00000339266.10	5058	13	-12	0	-9	0	multi-exon	TRUE	canonical	1	2	junction_2	166.332226950228	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCTTGTGGCATTAT	36306088	True	NA	23	True	AATAAA	-15	NA	36306326	36528633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36306513_36367044_36367276_36431645_36432717_36436108_36436351_36439753_36439869_36442726_36442778_36446696_36446938_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
WTC11_00056657	chr20	+	3175	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	-65	0	-65	0	multi-exon	FALSE	canonical	3	255	junction_1	36.9628191565524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	36461258	False	NA	27	True	AATAAA	-19	NA	36461272	36528637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
WTC11_00056660	chr20	+	2806	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	-22	2	0	-2	multi-exon	FALSE	canonical	3	313	junction_2	28.4057897071863	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTGCAGCATATTTAA	36533026	True	NA	7	True	ATTAAA	-23	NA	36541496	36551445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
WTC11_00056661	chr20	+	3355	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	74	3	-35	2	multi-exon	FALSE	canonical	3	20	junction_1	181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGGTTCTTGATTGAT	36573480	True	NA	35	True	AATAAA	-25	NA	36573561	36593947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36573653_36578740_36578967_36590909
WTC11_00056662	chr20	+	3439	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	200	junction_1	91	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36573492	False	NA	38	True	AATAAA	-28	NA	36573573	36593950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36573746_36578740_36578967_36590909
WTC11_00056663	chr20	+	1301	4	FSM	ENSG00000118707.11	ENST00000650844.1	1301	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	177.96691327947	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTATGTTGGGTCC	36573692	False	NA	NA	False	NA	NA	NA	36573722	36591772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36573746_36576214_36576404_36578740_36578967_36590909
WTC11_00056664	chr20	+	3383	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	-39	0	-39	0	multi-exon	FALSE	canonical	3	145	junction_1	118.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	36572844	True	NA	33	True	AATAAA	-23	NA	36574514	36593945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36574636_36578740_36578967_36590909
WTC11_00056665	chr20	+	797	2	FSM	ENSG00000118707.11	ENST00000561398.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGGTTTACCAAAAAAAA	36578796	False	NA	-18	True	NA	NA	NA	36578806	36592141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36578967_36591504
WTC11_00056666	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	82.0609529557146	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
WTC11_00056667	chr20	+	1180	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	-10	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	579.342299508676	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
WTC11_00056668	chr20	+	1050	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	-6	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	567.703169701288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
WTC11_00056670	chr20	+	1065	4	FSM	ENSG00000101084.19	ENST00000373852.9	1059	4	-6	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	540.135168268092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594731	True	NA	36	True	AATAAA	-20	NA	36605810	36612557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36609600_36609759_36612009
WTC11_00056671	chr20	+	639	1	FSM	ENSG00000269846.1	ENST00000598590.1	1394	1	24	731	24	-731	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGAGTTAGGAGATGGA	37095685	False	NA	NA	False	NA	NA	NA	37095808	37096447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37095800_37096400
WTC11_00056672	chr20	+	2348	17	FSM	ENSG00000118705.17	ENST00000373622.9	2348	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	1061.5405502588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37170593	False	NA	NA	False	AATAAA	-18	NA	37179160	37241619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37179370_37184179_37184374_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37238401_37238450_37241302
WTC11_00056674	chr20	+	2239	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	-12	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	274.732988269975	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37162767	True	NA	NA	False	AATAAA	-18	NA	37179317	37241619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
WTC11_00056677	chr20	+	1207	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	-16	0	-10	0	multi-exon	FALSE	canonical	3	133	junction_1	186.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283775	True	NA	9	True	AATAAA	-21	NA	37289638	37317260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37289687_37301207_37301414_37316307
WTC11_00056678	chr20	+	1563	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	-24	0	-10	0	multi-exon	FALSE	canonical	3	15	junction_1	189.592160966639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283775	True	NA	9	True	AATAAA	-21	NA	37289638	37317260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
WTC11_00056679	chr20	+	1574	5	NNC	ENSG00000101363.13	novel	1539	5	NA	NA	-9	63	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	185.189598789997	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTTGACCCCCAGAG	37283776	True	NA	72	True	NA	NA	NA	37289639	37317323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_37289687_37297346_37297535_37298762_37298880_37301207_37301414_37316307
WTC11_00056680	chr20	+	1309	4	NIC	ENSG00000101363.13	novel	1539	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	170.267110414457	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283790	True	NA	9	True	AATAAA	-21	NA	37289653	37317260	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_37289687_37298762_37298880_37301207_37301414_37316307
WTC11_00056681	chr20	+	1915	4	FSM	ENSG00000101363.13	ENST00000373605.7	1915	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	167.046899602078	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37296883	False	NA	9	True	AATAAA	-21	NA	37296895	37317260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37297535_37298762_37298880_37301207_37301414_37316307
WTC11_00056683	chr20	+	4644	14	FSM	ENSG00000197122.13	ENST00000373578.7	4644	14	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_11	10.0701680236066	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTGTTCAGTATTA	37345399	True	NA	NA	False	ATTAAA	-21	NA	37346139	37406050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
WTC11_00056685	chr20	+	1228	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	217	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	37514949	True	NA	17	True	NA	NA	NA	37521199	37523690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37521404_37522666
WTC11_00056686	chr20	+	1268	3	FSM	ENSG00000053438.11	ENST00000649451.1	1259	3	-9	0	0	0	multi-exon	FALSE	canonical	3	383	junction_2	22	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	37514990	True	NA	17	True	NA	NA	NA	37521240	37523690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37521404_37522357_37522439_37522666
WTC11_00056687	chr20	+	780	7	FSM	ENSG00000132792.19	ENST00000447935.3	778	7	-2	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	232.000299329309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACTGCTGGTACAGAAT	37683719	True	NA	NA	False	NA	NA	NA	37694029	37765212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37694153_37694926_37695034_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196
WTC11_00056688	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_8	31.0046591480843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	37683719	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
WTC11_00056690	chr20	+	1733	7	NIC	ENSG00000101413.12	novel	3672	7	NA	NA	-195	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	55.9982638619766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACCTATGGCTTTTTTA	38032370	True	NA	NA	False	AATAAA	-19	NA	38033529	38127780	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38127296
WTC11_00056691	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	18.5262576421203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	38033157	True	NA	8	True	AATAAA	-19	NA	38033745	38092364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
WTC11_00056694	chr20	+	1153	5	FSM	ENSG00000174365.21	ENST00000657911.1	1184	5	12	19	-6	0	multi-exon	FALSE	canonical	3	16	junction_1	23.2056027717446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445730	True	NA	14	True	AATAAA	-14	NA	38446661	38450921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450261_38450448_38450532
WTC11_00056697	chr20	+	1592	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	14	1	-2	0	multi-exon	FALSE	canonical	3	53	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445754	True	NA	13	True	AATAAA	-13	NA	38446685	38450920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447624_38448661_38448731_38450335
WTC11_00056699	chr20	+	8658	30	FSM	ENSG00000170471.15	ENST00000397042.7	8652	30	-6	0	-6	0	multi-exon	FALSE	canonical	3	24	junction_15	25.1100786999696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTGTGTGCTTTTGG	38469080	True	NA	27	True	ATTAAA	-24	NA	38472809	38578859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535085_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
WTC11_00056700	chr20	+	8647	30	FSM	ENSG00000170471.15	ENST00000262879.11	8633	30	-14	0	13	0	multi-exon	FALSE	canonical	3	81	junction_24	17.3643887776644	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	38469099	True	NA	26	True	ATTAAA	-23	NA	38472828	38578858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565358_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
WTC11_00056701	chr20	+	4829	30	NIC	ENSG00000170471.15	novel	8633	30	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_24	18.2485156498959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTACTGTTTAATCACC	38469132	True	NA	3	True	AATAAA	-17	NA	38472861	38575070	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
WTC11_00056702	chr20	+	7616	31	NIC	ENSG00000170471.15	novel	8633	30	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_30	27.0418605540045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	38469198	True	NA	26	True	ATTAAA	-23	NA	38472927	38578858	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565358_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773_38574941_38575872
WTC11_00056705	chr20	+	2856	9	FSM	ENSG00000101442.10	ENST00000243903.6	2547	9	0	-309	0	309	multi-exon	TRUE	canonical	3	107	junction_6	21.2981073102752	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTAAGTGGACAGAT	38746805	True	NA	NA	False	NA	NA	NA	38748459	38772829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38748854_38750009_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766237_38766378_38767463_38767597_38771558
WTC11_00056706	chr20	+	2197	9	NNC	ENSG00000101442.10	novel	2547	9	NA	NA	2	-329	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	47.6587806705123	2674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCCGTGTAGATACTT	38746807	True	NA	16	True	TTTAAA	-20	NA	38748461	38772191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_38748854_38750009_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766256_38766378_38767463_38767597_38771558
WTC11_00056707	chr20	+	6281	11	FSM	ENSG00000101445.10	ENST00000299824.6	6259	11	-22	0	-22	0	multi-exon	FALSE	canonical	3	39	junction_2	4.22965719651132	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTAGTGTGAGTGATTA	38804139	True	NA	16	True	ATTAAA	-25	NA	38805674	38923024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38805793_38835824_38836176_38889594_38889666_38895564_38895711_38900580_38900685_38902667_38902793_38905968_38906095_38906978_38907055_38907805_38907936_38908027_38908194_38918156
WTC11_00056708	chr20	+	2450	4	FSM	ENSG00000101447.15	ENST00000619304.4	2475	4	25	0	25	0	multi-exon	FALSE	canonical	3	538	junction_3	54.3588896951445	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCCCCCCCTCTGACA	NA	False	NA	12	True	AATAAA	-21	NA	38926336	38953106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38926926_38941958_38942127_38947875_38948001_38951538
WTC11_00056709	chr20	+	969	1	FSM	ENSG00000274825.1	ENST00000620080.1	638	1	-341	10	-341	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTAAATTCAGTTGTC	38955556	False	NA	-5	True	AATAAA	-6	NA	38955568	38956537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38955600_38956500
WTC11_00056710	chr20	+	3331	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	-37	20	8	0	multi-exon	FALSE	canonical	3	75	junction_17	11.2980643697671	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAATGTCTTCCCTCCCA	38960080	True	NA	-2	True	AGTAAA	-14	NA	38962306	39039701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
WTC11_00056712	chr20	+	3340	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	-22	0	-6	0	multi-exon	FALSE	canonical	2	11	junction_4	21.2000513412291	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960111	True	NA	18	True	AGTAAA	-34	NA	38962337	39039721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
WTC11_00056713	chr20	+	567	1	FSM	ENSG00000277581.1	ENST00000615559.1	522	1	-64	19	-64	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGCTCAAAAAAAGGGA	38960181	False	NA	NA	False	NA	NA	NA	38962407	38962974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38962400_38963000
WTC11_00056715	chr20	+	4570	2	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATATTTTCTCAGATT	40269097	False	NA	54	True	NA	NA	NA	40269119	40274763	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40270722
WTC11_00056716	chr20	+	3836	2	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	302	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTTCTCAGATTGGT	40269039	False	NA	57	True	NA	NA	NA	40269061	40274766	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40271517
WTC11_00056717	chr20	+	667	3	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	302	junction_1	213.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	40265731	True	NA	16	True	AATAAA	-22	NA	40269409	40274725	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40271517_40271583_40274362
WTC11_00056718	chr20	+	590	2	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	135	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACACAAAGCCTGTTTG	40265732	True	NA	5	True	AATAAA	-11	NA	40269410	40274714	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40274362
WTC11_00056719	chr20	+	3755	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	-21	0	-21	0	multi-exon	FALSE	canonical	3	192	junction_3	40.572897357719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	41019744	True	NA	5	True	AATAAA	-21	NA	41028800	41124487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
WTC11_00056720	chr20	+	4736	13	FSM	ENSG00000198900.7	ENST00000681884.1	4736	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.0538848332161	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTAATGGAAACTTAAG	41095010	False	NA	-9	True	AATAAA	-7	NA	41095021	41124473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41097014_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
WTC11_00056721	chr20	+	5293	33	FSM	ENSG00000124181.15	ENST00000244007.7	5285	33	-8	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_1	21.0831454825294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTGTATGCTCTTT	41133319	True	NA	17	True	AATAAA	-21	NA	41136951	41175721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174123_41174312_41174466
WTC11_00056722	chr20	+	7280	32	FSM	ENSG00000124181.15	ENST00000373271.5	7395	32	0	115	0	-115	multi-exon	FALSE	canonical	3	34	junction_30	19.8469691697177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGTTGAGGGTGGG	41133604	False	NA	NA	False	NA	NA	NA	41137236	41177511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174126_41174312_41174466
WTC11_00056724	chr20	+	511	3	FSM	ENSG00000124181.15	ENST00000470528.1	510	3	0	-1	0	1	multi-exon	FALSE	canonical	3	67	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGGGGTCCAGGGCTG	41163162	False	NA	NA	False	NA	NA	NA	41163173	41164006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41163480_41163714_41163834_41163920
WTC11_00056727	chr20	+	652	3	FSM	ENSG00000132793.12	ENST00000491528.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGGCCCAGGACTGGCT	NA	False	NA	NA	False	NA	NA	NA	41357975	41358893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41358352_41358438_41358543_41358721
WTC11_00056728	chr20	+	4457	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	-18	-86	-15	86	multi-exon	FALSE	canonical	3	50	junction_1	4.28952211790544	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAACATGTATGCATCCAT	43442566	True	NA	NA	False	NA	NA	NA	43457877	43464329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
WTC11_00056729	chr20	+	1865	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	-638	0	0	multi-exon	FALSE	canonical	2	9	junction_6	18.3121089264272	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	43442581	True	NA	104	True	AATAAA	-18	NA	43457892	43464243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
WTC11_00056732	chr20	+	1684	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	70	0	2	multi-exon	FALSE	canonical	3	179	junction_1	27.9847803099128	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATTTTTTTTTCTCA	43588336	True	NA	46	True	ATTAAA	-39	NA	43590936	43647229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
WTC11_00056733	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	55.9486239393791	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	43588389	True	NA	39	True	ATTAAA	-32	NA	43590989	43647222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
WTC11_00056734	chr20	+	307	3	FSM	ENSG00000101052.13	ENST00000476986.1	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCATGCTCCTCCCC	NA	False	NA	NA	False	AAAAAG	-16	NA	43603873	43605216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43603890_43604182_43604259_43605001
WTC11_00056735	chr20	+	399	2	FSM	ENSG00000101052.13	ENST00000461012.1	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTGATTTTTTTTTCT	NA	False	NA	44	True	ATTAAA	-37	NA	43637146	43647227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43637254_43646935
WTC11_00056736	chr20	+	2692	13	FSM	ENSG00000101057.16	ENST00000396863.8	2704	13	12	0	12	0	multi-exon	FALSE	canonical	3	90	junction_2	376.912014489677	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCTCTCTACTGGGC	43646049	True	NA	33	True	AATAAA	-28	NA	43667030	43716495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43667304_43673805_43673900_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
WTC11_00056737	chr20	+	2668	14	FSM	ENSG00000101057.16	ENST00000217026.5	2668	14	0	0	0	0	multi-exon	FALSE	canonical	3	1314	junction_2	75.1475078029477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	43646132	True	NA	20	True	AATAAA	-15	NA	43667113	43716482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43667304_43673805_43673900_43681783_43681856_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
WTC11_00056738	chr20	+	2491	9	FSM	ENSG00000124191.18	ENST00000341197.9	2491	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	6.25999201277446	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTGTGTCTCCTTGCC	43914712	True	NA	NA	False	AATAAA	-20	NA	43914851	44069616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43914991_43973366_43973433_44006546_44006793_44051305_44051546_44054298_44054527_44064776_44064858_44065711_44066108_44066729_44066858_44068649
WTC11_00056739	chr20	+	1323	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	7	48	7	7	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATCTCAAAAAAATAAAAAT	44210898	False	NA	-33	True	NA	NA	NA	44210913	44225979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44211078_44224820
WTC11_00056740	chr20	+	1248	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	-40	1570	10	142	multi-exon	FALSE	canonical	3	17	junction_2	6.30555310817378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCATGAACACTTGGAC	44246492	True	NA	64	True	NA	NA	NA	44247267	44279377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
WTC11_00056742	chr20	+	6220	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	4	0	4	0	multi-exon	FALSE	canonical	3	33	junction_1	11.5217186218029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	44475051	True	NA	30	True	AATAAA	-18	NA	44475877	44494603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
WTC11_00056743	chr20	+	6233	6	FSM	ENSG00000124120.11	ENST00000372904.7	6234	6	1	0	1	0	multi-exon	FALSE	canonical	3	11	junction_1	22.9050212835527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	44475062	True	NA	30	True	AATAAA	-18	NA	44475888	44494603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44475992_44478623_44478648_44479984_44480445_44484336_44484531_44486595_44486707_44489262
WTC11_00056745	chr20	+	1175	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	16	0	16	0	multi-exon	FALSE	canonical	3	255	junction_1	67.2755527662166	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531800	44619037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
WTC11_00056746	chr20	+	1322	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	16	0	16	0	multi-exon	FALSE	canonical	3	68	junction_1	159.058754867502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531800	44619037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
WTC11_00056747	chr20	+	3226	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	-124	7	-115	-7	multi-exon	FALSE	canonical	3	258	junction_1	1027.44034701128	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAATTGATGTGTCACC	44885554	False	NA	23	True	AATAAA	-20	NA	44885586	44908525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
WTC11_00056748	chr20	+	5879	4	FSM	ENSG00000166913.13	ENST00000631616.1	5867	4	-12	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	1074.0189321733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	44857665	True	NA	18	True	NA	NA	NA	44885701	44906504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44887743_44901530_44904117_44904967_44906097_44906381
WTC11_00056749	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1129.9498022282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	44857665	True	NA	34	True	GATAAA	-14	NA	44885701	44906520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
WTC11_00056750	chr20	+	3023	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	-3	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	206.28233079932	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857665	True	NA	30	True	AATAAA	-27	NA	44885701	44908532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
WTC11_00056752	chr20	+	2134	15	FSM	ENSG00000101104.13	ENST00000217073.7	2141	15	7	0	7	0	multi-exon	FALSE	canonical	3	18	junction_7	27.2235642225553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907066	True	NA	14	True	ATTAAA	-17	NA	44910066	44939316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00056753	chr20	+	2128	15	FSM	ENSG00000101104.13	ENST00000255136.8	2126	15	-2	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_9	29.8157607958733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907057	True	NA	14	True	ATTAAA	-17	NA	44910057	44939316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00056755	chr20	+	2223	6	FSM	ENSG00000101104.13	ENST00000372824.5	2223	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	10.9288608738514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCCCAGGAGGCCCT	44931550	False	NA	15	True	ATTAAA	-18	NA	44931561	44939317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00056756	chr20	+	1186	7	FSM	ENSG00000101104.13	ENST00000479873.5	1178	7	-8	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	39.4014241141386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCCCAGGAGGCCCT	44932665	False	NA	15	True	ATTAAA	-18	NA	44932681	44939317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44933186_44935390_44935498_44936636_44936731_44936893_44936977_44938060_44938192_44938673_44938749_44939125
WTC11_00056760	chr20	+	6385	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	-19	0	14	0	multi-exon	FALSE	canonical	3	106	junction_8	15.1937487145207	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	44961863	True	NA	58	True	AATATA	-43	NA	44966492	45080021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
WTC11_00056761	chr20	+	917	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	-3	18	0	-18	multi-exon	FALSE	canonical	3	152	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAAAAAAACT	44961882	True	NA	NA	False	TTTAAA	-20	NA	44966511	44972902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44966604_44972077
WTC11_00056762	chr20	+	1663	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	-41	0	-41	0	multi-exon	FALSE	canonical	2	18	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	45206608	True	NA	6	True	AATAAA	-20	NA	45206991	45209768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45207130_45207373_45208731_45209600
WTC11_00056763	chr20	+	2767	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	-39	0	-22	0	multi-exon	TRUE	canonical	3	93	junction_3	10.1434160364686	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	NA	False	NA	17	True	AATAAA	-22	NA	45363116	45369209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
WTC11_00056764	chr20	+	1306	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	7	0	-7	multi-exon	FALSE	canonical	1	6	junction_3	164.440141084834	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	45361078	True	NA	NA	False	AATAAA	-15	NA	45363199	45410603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
WTC11_00056768	chr20	+	1709	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	-514	7	-500	-4	multi-exon	FALSE	canonical	3	32	junction_3	180.787782281387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	45405556	45410603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
WTC11_00056769	chr20	+	1221	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	-110	7	-110	-4	multi-exon	FALSE	canonical	3	35	junction_1	171.821612920688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	45405936	False	NA	NA	False	AATAAA	-15	NA	45405946	45410603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
WTC11_00056771	chr20	+	1200	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	7	0	-4	multi-exon	FALSE	canonical	3	32	junction_3	165.582473576027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	45403227	True	NA	NA	False	AATAAA	-15	NA	45406587	45410603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
WTC11_00056772	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	33.5062183283442	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403258	True	NA	NA	False	AATAAA	-22	NA	45406618	45410610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
WTC11_00056773	chr20	+	1640	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	-110	7	-110	-4	multi-exon	FALSE	canonical	3	16	junction_1	180.743526086613	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	45407082	False	NA	NA	False	AATAAA	-15	NA	45407096	45410603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
WTC11_00056775	chr20	+	2045	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	-13	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	161.811742466361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45416069	False	NA	-37	True	NA	NA	NA	45416083	45426189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
WTC11_00056776	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	165.121803153137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45416069	False	NA	-24	True	NA	NA	NA	45416083	45426202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
WTC11_00056788	chr20	+	2205	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	-18	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	155.893585234786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	45408048	True	NA	14	True	AATAAA	-16	NA	45416122	45426240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
WTC11_00056790	chr20	+	2186	12	FSM	ENSG00000124155.19	ENST00000279036.12	2168	12	-18	0	0	0	multi-exon	FALSE	canonical	3	489	junction_9	28.5124302311457	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	45408048	True	NA	15	True	AATAAA	-17	NA	45416122	45426241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
WTC11_00056798	chr20	+	1418	2	FSM	ENSG00000124155.19	ENST00000640253.1	1418	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCACTGTGTAGTGG	45423744	False	NA	-47	True	NA	NA	NA	45423767	45426179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45424580_45425573
WTC11_00056800	chr20	+	1030	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	-338	0	-335	0	multi-exon	FALSE	canonical	3	13	junction_2	159.717524085493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	45469417	45481531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
WTC11_00056801	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_1	58.2885542414251	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464760	True	NA	17	True	AATAAA	-17	NA	45469752	45481532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
WTC11_00056802	chr20	+	423	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464760	True	NA	17	True	AATAAA	-17	NA	45469752	45481532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45469861_45479941_45480095_45481370
WTC11_00056805	chr20	+	818	2	FSM	ENSG00000101443.18	ENST00000342873.7	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45479420	False	NA	17	True	AATAAA	-17	NA	45479438	45481532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45480095_45481370
WTC11_00056807	chr20	+	1281	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	341	junction_6	33.3687312048604	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	45788190	True	NA	12	True	ATTAAA	-19	NA	45791936	45811418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
WTC11_00056808	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	108.144760650705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	45788308	True	NA	21	True	ATTAAA	-28	NA	45792054	45811427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
WTC11_00056809	chr20	+	753	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	-282	5	-200	0	multi-exon	FALSE	canonical	3	20	junction_2	1651.48424825132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	45812365	False	NA	33	True	AATAAA	-21	NA	45812375	45816952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
WTC11_00056810	chr20	+	651	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	86	junction_3	1493.19238546143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45812533	False	NA	34	True	AATAAA	-22	NA	45812565	45816953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
WTC11_00056811	chr20	+	787	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	-9	-1	0	0	multi-exon	FALSE	canonical	3	3264	junction_1	158.182679203508	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45746809	True	NA	34	True	AATAAA	-22	NA	45812634	45816953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
WTC11_00056812	chr20	+	801	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	-69	5	-10	0	multi-exon	FALSE	canonical	3	37	junction_4	1693.06933112617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	45812533	False	NA	33	True	AATAAA	-21	NA	45812565	45816952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
WTC11_00056813	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	1467.7753574713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746848	True	NA	38	True	AATAAA	-26	NA	45812673	45816957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
WTC11_00056814	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1403.71370300357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45812878	True	NA	38	True	AATAAA	-26	NA	45813005	45816957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
WTC11_00056815	chr20	+	3204	4	FSM	ENSG00000124104.19	ENST00000491381.6	3206	4	2	0	2	0	multi-exon	FALSE	canonical	3	27	junction_3	11.8415464455544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGACTAGAACTGGGTC	45833056	True	NA	NA	False	AATACA	-17	NA	45833800	45843276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840638
WTC11_00056816	chr20	+	1043	5	FSM	ENSG00000124104.19	ENST00000462307.5	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.2486558751253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCCTCCACCCTTTG	45833086	True	NA	NA	False	NA	NA	NA	45833830	45841134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840447_45840459_45840638
WTC11_00056817	chr20	+	1527	5	FSM	ENSG00000124104.19	ENST00000342644.9	1506	5	-21	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	19.880895352071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTTTTCTTCATTTG	45833086	True	NA	18	True	TATAAA	-32	NA	45833830	45842881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840638_45840781_45842032
WTC11_00056818	chr20	+	3121	3	FSM	ENSG00000124104.19	ENST00000344780.4	3106	3	-15	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGACTAGAACTGGGT	45832986	True	NA	NA	False	AATACA	-16	NA	45834135	45843275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45834469_45834958_45835110_45840638
WTC11_00056819	chr20	+	3214	3	FSM	ENSG00000124104.19	ENST00000372547.5	2794	3	-97	-323	-97	-71	multi-exon	FALSE	canonical	0	0	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGATGAGGAAACTGAGG	45834451	False	NA	NA	False	NA	NA	NA	45834479	45843204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45835117_45840447_45840459_45840638
WTC11_00056820	chr20	+	2794	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	20	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	45856997	True	NA	NA	False	AATAAA	-7	NA	45857595	45879122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45857981_45876713
WTC11_00056821	chr20	+	2775	2	FSM	ENSG00000168612.5	ENST00000372523.1	2769	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	16	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880302	True	NA	29	True	AATAAA	-21	NA	45881220	45885266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45881262_45882532
WTC11_00056822	chr20	+	2954	15	FSM	ENSG00000064601.21	ENST00000372484.8	2939	15	-15	0	-15	0	multi-exon	FALSE	canonical	3	240	junction_1	24.5985108226876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45890130	True	NA	21	True	ATTAAA	-18	NA	45890238	45898820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
WTC11_00056823	chr20	+	2278	14	FSM	ENSG00000064601.21	ENST00000678078.1	2278	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	80.4903610679693	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGCCCTGTACATC	45890759	False	NA	NA	False	NA	NA	NA	45890867	45898568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892888_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45898110_45898366
WTC11_00056825	chr20	+	2557	14	FSM	ENSG00000064601.21	ENST00000684198.1	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	25.0334687211544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45890854	False	NA	NA	False	NA	NA	NA	45890962	45898949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45898110_45898366
WTC11_00056826	chr20	+	4190	14	FSM	ENSG00000064601.21	ENST00000678691.2	4190	14	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	22.2689318433504	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45890854	False	NA	NA	False	NA	NA	NA	45890962	45898949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45897041_45897716_45897807_45898004_45898110_45898366
WTC11_00056827	chr20	+	2433	14	FSM	ENSG00000064601.21	ENST00000606066.3	2433	14	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	23.1138166625518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45890854	False	NA	NA	False	NA	NA	NA	45890962	45898949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
WTC11_00056829	chr20	+	1917	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	-19	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	74.957300770342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888821	True	NA	21	True	ATTAAA	-18	NA	45891321	45898820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
WTC11_00056834	chr20	+	2362	11	FSM	ENSG00000064601.21	ENST00000677755.2	2362	11	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_7	19.1822834928483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45891599	True	NA	NA	False	NA	NA	NA	45891620	45898949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
WTC11_00056836	chr20	+	2708	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	-19	0	-19	0	multi-exon	FALSE	canonical	3	273	junction_4	57.4668382634716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45934642	False	NA	9	True	AATACA	-14	NA	45934663	45948020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
WTC11_00056837	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	45928758	True	NA	115	True	GATAAA	-21	NA	45934732	45937972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45934805_45937417
WTC11_00056838	chr20	+	1324	6	FSM	ENSG00000100982.12	ENST00000479348.2	1324	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	20.6939604715965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGGGTCTTGAGGGC	45944995	False	NA	12	True	AATACA	-17	NA	45945006	45948023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262
WTC11_00056839	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	17.7738493923579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46008521	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
WTC11_00056840	chr20	+	605	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTCTTTCCTCATTTGC	46021200	True	NA	10	True	AATAAA	-21	NA	46021682	46023587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_46021887_46022889_46023072_46023368
WTC11_00056841	chr20	+	289	2	FSM	ENSG00000124140.15	ENST00000626695.1	391	2	102	0	102	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCACCTCTGAAACTTAT	46022795	False	NA	NA	False	NA	NA	NA	46022810	46023396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46023072_46023368
WTC11_00056842	chr20	+	1731	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	-49	0	-13	0	multi-exon	FALSE	canonical	3	130	junction_7	13.114877048604	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	46116458	True	NA	NA	False	ATTAAA	-22	NA	46118264	46129858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
WTC11_00056843	chr20	+	1625	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	-2	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	50.7253509055363	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	46116507	True	NA	NA	False	ATTAAA	-27	NA	46118313	46129863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
WTC11_00056844	chr20	+	1596	7	NIC	ENSG00000101017.14	novel	1623	8	NA	NA	-13	16	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	53.3510387277824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACATGAGCTATTTA	46116458	True	NA	NA	False	ATTAAA	-43	NA	46118264	46129879	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
WTC11_00056845	chr20	+	4226	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	-20	21	-20	-21	multi-exon	FALSE	canonical	3	51	junction_1	7.11951543294907	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGTTATTATTTGTAA	46709004	True	NA	7	True	AATAAA	-17	NA	46709628	46736326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
WTC11_00056846	chr20	+	2666	16	FSM	ENSG00000064655.19	ENST00000327619.10	2483	16	-187	4	32	-4	multi-exon	TRUE	canonical	0	0	junction_6	1.37598449603669	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGGGGTAGGATGTGG	46894527	True	NA	0	True	AATAAA	-16	NA	46894655	47188840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46894988_46990000_46990120_47001427_47001474_47004941_47005085_47016180_47016298_47072184_47072253_47074157_47074336_47089238_47089382_47097084_47097169_47143058_47143149_47169138_47169198_47172706_47172868_47179797_47179913_47180814_47180937_47183290_47183392_47188052
WTC11_00056847	chr20	+	981	1	FSM	ENSG00000267882.2	ENST00000599904.2	2253	1	77	1195	77	-1195	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGGTGATTAAAGGGC	47318568	False	NA	NA	False	NA	NA	NA	47318578	47319559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_47318600_47319600
WTC11_00056848	chr20	+	4811	23	NNC	ENSG00000124151.19	novel	7961	23	NA	NA	0	-2017	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_19	11.9828562110712	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTTTTCTGCCTTG	47498799	True	NA	13	True	CATAAA	-8	NA	47501886	47653725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649110_47650984_47651277_47652405_47652581_47652930_47653073_47653405
WTC11_00056849	chr20	+	7980	23	FSM	ENSG00000124151.19	ENST00000371998.8	7961	23	-19	0	-19	0	multi-exon	FALSE	canonical	3	11	junction_19	14.0815217998037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCCTAAAGAGTTTTT	47498780	True	NA	11	True	AATAAA	-16	NA	47501867	47656872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649110_47650981_47651277_47652405_47652581_47652930_47653073_47653405
WTC11_00056850	chr20	+	7949	23	FSM	ENSG00000124151.19	ENST00000372004.7	7939	23	-15	5	0	0	multi-exon	FALSE	canonical	3	11	junction_19	14.0815217998037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCCTAAAGAGTTTTT	47498799	True	NA	11	True	AATAAA	-16	NA	47501886	47656872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649098_47650981_47651277_47652405_47652581_47652930_47653073_47653405
WTC11_00056851	chr20	+	5563	36	NIC	ENSG00000124198.10	novel	9031	39	NA	NA	4	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	23.5693332402034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCACCTAAAATATGCTG	48919281	True	NA	4	True	AATAAA	-19	NA	48921714	49033619	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_48922011_48951322_48951470_48952704_48952885_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
WTC11_00056852	chr20	+	9044	39	FSM	ENSG00000124198.10	ENST00000371917.5	9031	39	-13	0	-13	0	multi-exon	FALSE	canonical	3	51	junction_10	14.7629468040073	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTTCTAATGTGTAG	48919264	True	NA	10	True	AATAAA	-14	NA	48921697	49036693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
WTC11_00056853	chr20	+	8828	39	FSM	ENSG00000124198.10	ENST00000679436.1	8828	39	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	17.3726669451384	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAAATTTTAAAAAGT	48919456	False	NA	-11	True	ATTAAA	-29	NA	48921889	49036672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965874_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
WTC11_00056854	chr20	+	3438	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	21	0	21	0	multi-exon	FALSE	canonical	3	3	junction_8	403.560275585006	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	49031726	True	NA	43	True	AATAAA	-33	NA	49046266	49096960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
WTC11_00056855	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_8	140.692014896211	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	49031771	True	NA	32	True	AATAAA	-22	NA	49046311	49096949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
WTC11_00056856	chr20	+	1401	6	FSM	ENSG00000124207.17	ENST00000469700.1	1401	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	737.582917372684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTAAGGGCAGGTTTTC	49090685	True	NA	35	True	AATAAA	-25	NA	49090762	49096952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096175
WTC11_00056857	chr20	+	557	1	FSM	ENSG00000226284.1	ENST00000437218.1	533	1	-24	0	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGGGAGCCCGGGCAGC	NA	False	NA	NA	False	NA	NA	NA	49134455	49135012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49134500_49135000
WTC11_00056858	chr20	+	4936	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	-7	0	-7	0	multi-exon	FALSE	canonical	3	522	junction_5	72.8712715836784	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	49206612	True	NA	25	True	ATTAAA	-31	NA	49219339	49244077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
WTC11_00056859	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_12	75.864270246276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	49206688	True	NA	21	True	ATTAAA	-27	NA	49219415	49244073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
WTC11_00056861	chr20	+	3363	7	FSM	ENSG00000124228.15	ENST00000471144.1	3639	7	0	276	0	-272	multi-exon	FALSE	canonical	3	570	junction_6	69.993848936095	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCTTACAGATACAA	49233805	False	NA	NA	False	NA	NA	NA	49233837	49243801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628
WTC11_00056864	chr20	+	939	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	7	0	7	0	multi-exon	FALSE	canonical	3	466	junction_3	330.942089596755	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278184	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
WTC11_00056865	chr20	+	853	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	7	0	7	0	multi-exon	FALSE	canonical	3	274	junction_2	499	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278184	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49289044
WTC11_00056866	chr20	+	1068	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	7	0	7	0	multi-exon	FALSE	canonical	3	23	junction_5	496.47582015643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278184	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
WTC11_00056867	chr20	+	620	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	24	junction_1	326.858818911162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49278182	True	NA	16	True	AATAAA	-17	NA	49278246	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
WTC11_00056868	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	308.223133460161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244549	True	NA	16	True	AATAAA	-17	NA	49278639	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
WTC11_00056869	chr20	+	506	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	-2	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	355.359911451287	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244549	True	NA	16	True	AATAAA	-17	NA	49278639	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
WTC11_00056870	chr20	+	2401	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	18	189	18	-189	multi-exon	FALSE	canonical	3	499	junction_3	311.962637987308	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACTCTAAAGGTCCTG	49278131	True	NA	NA	False	AGTAAA	-16	NA	49278195	49290671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
WTC11_00056872	chr20	+	1130	3	FSM	ENSG00000177410.13	ENST00000659056.1	527	3	-603	0	545	0	multi-exon	FALSE	canonical	3	499	junction_1	31.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49279705	False	NA	16	True	AATAAA	-17	NA	49279718	49289260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49280571_49280902_49280965_49289044
WTC11_00056873	chr20	+	6256	16	FSM	ENSG00000197818.12	ENST00000417961.5	6309	16	53	0	53	0	multi-exon	TRUE	canonical	3	10	junction_6	10.3987178696863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTCTGTGTTCATG	49812749	False	NA	20	True	AATAAA	-20	NA	49812765	49892241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850761_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
WTC11_00056874	chr20	+	6147	16	FSM	ENSG00000197818.12	ENST00000361573.3	6147	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	7.81167217836375	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTCTGTGTTCATGT	49811755	True	NA	21	True	AATAAA	-21	NA	49812827	49892242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850809_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
WTC11_00056875	chr20	+	631	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	-7	0	-7	0	multi-exon	FALSE	canonical	2	5	junction_1	512.622912090359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	NA	False	NA	-32	True	NA	NA	NA	49936328	49952152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
WTC11_00056877	chr20	+	2470	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	-23	0	-3	0	multi-exon	FALSE	canonical	3	1048	junction_2	64.2171316706064	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	49924500	True	NA	11	True	AATAAA	-19	NA	49936373	49953885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
WTC11_00056879	chr20	+	807	1	FSM	ENSG00000229222.1	ENST00000422599.1	1288	1	181	300	181	-300	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCAGATGGAACAGC	49956909	False	NA	NA	False	NA	NA	NA	49956925	49957732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49956900_49957700
WTC11_00056880	chr20	+	1707	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	14	junction_2	4	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	49982362	True	NA	NA	False	AATAAA	-24	NA	49982977	49988886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49983142_49983823_49984352_49987871
WTC11_00056881	chr20	+	763	3	FSM	ENSG00000231742.6	ENST00000427333.6	740	3	-23	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_1	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	50172376	True	NA	9	True	AATAAA	-30	NA	50172511	50173592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50172789_50172922_50173018_50173201
WTC11_00056882	chr20	+	1839	1	FSM	ENSG00000172216.6	ENST00000303004.5	1839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTTTTGGGGGCAGT	50189594	True	NA	13	True	AATAAA	-21	NA	50190829	50192668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50190800_50192700
WTC11_00056883	chr20	+	929	2	Genic_Genomic	ENSG00000172216.6	novel	1839	1	NA	NA	623	-129	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTTTTGTATTA	50191070	False	NA	36	True	NA	NA	NA	50191452	50192539	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_+_50192210_50192367
WTC11_00056884	chr20	+	3995	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	-22	6	-22	-6	multi-exon	FALSE	canonical	3	44	junction_9	6.28539361054709	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTGATTTTTTTGAC	50504466	True	NA	NA	False	ATTAAA	-15	NA	50510360	50585235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
WTC11_00056885	chr20	+	4763	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-32	479	30	2	intron_retention	FALSE	canonical	3	46	junction_4	5.79735931265262	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGTGCTTCCCATTTT	50504456	True	NA	17	True	AATAAA	-23	NA	50510350	50584762	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
WTC11_00056886	chr20	+	4711	3	FSM	ENSG00000124171.9	ENST00000371610.7	4579	3	-132	0	-132	0	multi-exon	FALSE	canonical	3	16	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTATA	50727798	True	NA	NA	False	AATAAA	-22	NA	50731447	50753741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50731853_50737856_50738080_50749658
WTC11_00056890	chr20	+	1177	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	-63	0	-33	0	multi-exon	FALSE	canonical	3	251	junction_1	11.1130553854464	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	50791312	True	NA	16	True	AATAAA	-16	NA	50794997	50877177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
WTC11_00056891	chr20	+	751	2	NNC	ENSG00000124243.19	novel	1378	6	NA	NA	75961	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	50870965	False	NA	16	True	AATAAA	-16	NA	50871060	50877177	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_50871120_50876485
WTC11_00056892	chr20	+	903	3	FSM	ENSG00000259456.4	ENST00000614698.2	903	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTATTCTAATAACTCA	50930977	True	NA	19	True	AATAAA	-16	NA	50931002	50945132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50931055_50931374_50931450_50944356
WTC11_00056893	chr20	+	1013	4	FSM	ENSG00000259456.4	ENST00000664246.1	993	4	-20	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTCTAATAACTCAAG	50930977	True	NA	21	True	AATAAA	-18	NA	50931002	50945134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50931055_50931374_50931450_50933719_50933828_50944356
WTC11_00056894	chr20	+	4922	1	FSM	ENSG00000124217.5	ENST00000244051.3	5112	1	2	188	2	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTGGGATTTGAATC	50957304	True	NA	NA	False	AATACA	-30	NA	50958819	50963741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50958800_50963700
WTC11_00056895	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2746	junction_1	173.513368040877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	54172669	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
WTC11_00056896	chr20	+	659	4	FSM	ENSG00000101132.10	ENST00000493356.5	659	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1455.74913895065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCACATGTCTGCTTAT	54208280	False	NA	107	True	TTTAAA	-31	NA	54208299	54219285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_54208443_54214350_54214459_54215299_54215441_54219018
WTC11_00056897	chr20	+	2053	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	-88	0	-88	0	multi-exon	FALSE	canonical	3	52	junction_3	3.49343407446785	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	54475472	False	NA	10	True	AATAAA	-18	NA	54475504	54651169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
WTC11_00056899	chr20	+	625	1	FSM	ENSG00000185834.10	ENST00000432629.1	497	1	-89	-39	-89	39	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	NA	False	AGTAAA	-15	NA	55074554	55075179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_55074600_55075200
WTC11_00056900	chr20	+	2997	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	167	junction_2	8	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	56356995	True	NA	NA	False	AATAAA	-22	NA	56358963	56368663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56359192_56365086_56365263_56366070
WTC11_00056901	chr20	+	380	2	FSM	ENSG00000124098.10	ENST00000437418.1	614	2	0	234	0	-234	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTCAGACTCCCTG	56357140	False	NA	NA	False	NA	NA	NA	56359108	56360478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56359192_56360181
WTC11_00056902	chr20	+	4339	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	-307	0	-33	0	multi-exon	FALSE	canonical	3	270	junction_1	44.7633778886268	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	56392337	56406362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
WTC11_00056903	chr20	+	4479	6	FSM	ENSG00000101138.12	ENST00000493039.5	2234	6	-345	-1900	-33	0	multi-exon	FALSE	canonical	3	6	junction_2	180.891790858513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	56392337	56406362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56392816_56395520_56395760_56397206_56397485_56397643_56397842_56398966_56399358_56403467
WTC11_00056904	chr20	+	520	2	FSM	ENSG00000101138.12	ENST00000498689.5	585	2	0	65	0	-65	multi-exon	FALSE	canonical	3	88	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTCAGTAAGTAAGGGGT	NA	False	NA	NA	False	NA	NA	NA	56392370	56395872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56392539_56395520
WTC11_00056910	chr20	+	1736	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	9	0	9	0	multi-exon	FALSE	canonical	3	7	junction_1	247.682193820635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	56462268	True	NA	25	True	AATAAA	-21	NA	56468593	56518886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
WTC11_00056911	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_7	32.6417581481145	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	56462301	True	NA	2	True	AATAAA	-13	NA	56468626	56519449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
WTC11_00056912	chr20	+	657	5	FSM	ENSG00000022277.13	ENST00000484084.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	8.04673846971554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACGACCAATAGTTGC	56462332	True	NA	NA	False	NA	NA	NA	56468657	56473360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56468767_56470599_56470942_56471613_56471670_56472325_56472416_56473300
WTC11_00056913	chr20	+	432	5	FSM	ENSG00000022277.13	ENST00000487211.5	411	5	-21	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	244.890791986959	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATTAAGGTAACACG	56462332	True	NA	NA	False	NA	NA	NA	56468657	56474759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56468767_56471613_56471670_56472325_56472416_56473300_56473396_56474677
WTC11_00056914	chr20	+	1174	1	FSM	ENSG00000280387.1	ENST00000623967.1	1248	1	-31	105	-31	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAGTCCCCTTATGCTA	56522209	False	NA	NA	False	NA	NA	NA	56522220	56523394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56522200_56523400
WTC11_00056915	chr20	+	517	2	FSM	ENSG00000213714.1	ENST00000371325.1	694	2	177	0	177	0	multi-exon	FALSE	canonical	3	24	junction_1	0	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTTGAGAGCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	56533422	56536520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56533591_56536171
WTC11_00056916	chr20	+	2703	7	Fusion	ENSG00000289199.1_ENSG00000087510.7	novel	2862	7	NA	NA	-15	0	multi-exon	TRUE	canonical	3	23	junction_1	26.2979720384165	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56624217	True	NA	20	True	AATAAA	-24	NA	56625061	56639283	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr20_+_56625190_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
WTC11_00056917	chr20	+	2862	7	FSM	ENSG00000087510.7	ENST00000201031.3	2862	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.4846662217517	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56628109	True	NA	20	True	AATAAA	-24	NA	56629305	56639283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56629593_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
WTC11_00056918	chr20	+	3130	7	NNC	ENSG00000087510.7	novel	2862	7	NA	NA	200	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	29.2655466756085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56630384	False	NA	20	True	AATAAA	-24	NA	56630433	56639283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_56630989_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
WTC11_00056919	chr20	+	2388	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	-3	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	23.631468024474	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	57347343	True	NA	4	True	AATAAA	-19	NA	57351251	57379202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
WTC11_00056920	chr20	+	2369	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	-16	9	-16	0	multi-exon	FALSE	canonical	3	51	junction_1	121.184648401786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	57351171	False	NA	4	True	AATAAA	-19	NA	57351206	57379202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
WTC11_00056921	chr20	+	1503	11	FSM	ENSG00000101146.13	ENST00000527947.5	1503	11	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	17.1011695506477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGTCATGGAGCTTTC	57347343	True	NA	NA	False	GGGGCT	-23	NA	57351251	57375106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606
WTC11_00056923	chr20	+	2352	3	FSM	ENSG00000132819.17	ENST00000440234.6	686	3	-45	-1621	-13	1	multi-exon	FALSE	canonical	3	45	junction_2	171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCTAATTTTTCTCAAA	57385404	True	NA	72	True	AATAAA	-24	NA	57391382	57409334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57391819_57392653_57392778_57407542
WTC11_00056924	chr20	+	2406	4	FSM	ENSG00000132819.17	ENST00000356208.10	2393	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	387	junction_1	42.7733042393916	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATCTAATTTTTCTCAA	57385404	True	NA	71	True	AATAAA	-23	NA	57391382	57409333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57391819_57392653_57392778_57393278_57393334_57407542
WTC11_00056926	chr20	+	760	4	FSM	ENSG00000132819.17	ENST00000371219.2	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	215.846138616273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGACTGTGGCATTGTC	57392213	False	NA	NA	False	NA	NA	NA	57392229	57407860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57392493_57392653_57392778_57393278_57393334_57407542
WTC11_00056927	chr20	+	8669	7	FSM	ENSG00000124209.4	ENST00000244040.4	8651	7	-18	0	-18	0	multi-exon	FALSE	canonical	3	104	junction_3	6.10100173924104	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTCCCAAATGGTT	58308209	True	NA	10	True	AATAAA	-21	NA	58309696	58367507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58310013_58311042_58311123_58343717_58343800_58353272_58353345_58353431_58353539_58354155_58354266_58359605
WTC11_00056928	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	10.0876161703348	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	58387011	True	NA	13	True	AATAAA	-25	NA	58389228	58451101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
WTC11_00056929	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	58389294	False	NA	19	True	AATAAA	-17	NA	58389312	58445552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58389518_58418210_58418364_58444076
WTC11_00056930	chr20	+	3583	2	FSM	ENSG00000124164.16	ENST00000476395.1	3583	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	58438963	True	NA	19	True	AATAAA	-17	NA	58438976	58445552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58441084_58444076
WTC11_00056931	chr20	+	5206	8	NIC	ENSG00000124222.22	novel	4273	10	NA	NA	-428	0	intron_retention	FALSE	canonical	3	54	junction_1	146.642283068948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	58650799	False	NA	17	True	AATAAA	-24	NA	58650824	58679500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
WTC11_00056933	chr20	+	4859	8	FSM	ENSG00000124222.22	ENST00000371132.8	4552	8	-333	26	0	0	multi-exon	FALSE	canonical	3	159	junction_1	91.8721383005662	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	58639361	True	NA	17	True	AATAAA	-24	NA	58651271	58679500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652088_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
WTC11_00056934	chr20	+	5320	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	-449	26	-430	0	multi-exon	FALSE	canonical	3	78	junction_1	117.170748802762	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	58650797	False	NA	17	True	AATAAA	-24	NA	58650822	58679500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
WTC11_00056937	chr20	+	4696	7	NIC	ENSG00000124222.22	novel	4897	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_3	128.138813618496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	58639361	True	NA	17	True	AATAAA	-24	NA	58651271	58679500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58652088_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
WTC11_00056939	chr20	+	4342	8	FSM	ENSG00000124222.22	ENST00000358029.8	4329	8	-13	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	127.081365547384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58651757	False	NA	43	True	ATTAAA	-32	NA	58651865	58679526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652139_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
WTC11_00056941	chr20	+	1224	2	ISM	ENSG00000254995.4	ENST00000530122.1	3433	23	39955	22637	17751	567	internal_fragment	FALSE	canonical	3	140	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCGGGGCCCGCGGGCTG	NA	False	NA	NA	False	NA	NA	NA	58691388	58692773	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_58691563_58691723
WTC11_00056942	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_8	71.2515042613427	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58690933	True	NA	20	True	ATTAAA	-22	NA	58692799	58715844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
WTC11_00056943	chr20	+	3146	7	NNC	ENSG00000215440.12	novel	2191	12	NA	NA	27	-8408	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	154.574325883124	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGAGGCTCAGTTTGTT	58690960	True	NA	9	True	AATAAA	-21	NA	58692826	58705172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58702922
WTC11_00056944	chr20	+	4684	7	FSM	ENSG00000215440.12	ENST00000529976.5	4684	7	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_5	51.1826793619352	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58693156	False	NA	20	True	ATTAAA	-22	NA	58693168	58715844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478
WTC11_00056945	chr20	+	2061	3	FSM	ENSG00000215440.12	ENST00000527081.1	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58712799	False	NA	20	True	ATTAAA	-22	NA	58712820	58715844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58714094_58714559_58714671_58715167
WTC11_00056946	chr20	+	768	2	FSM	ENSG00000215440.12	ENST00000525068.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTACGCCTGGCCTGCC	58713709	False	NA	NA	False	NA	NA	NA	58713730	58714964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58714094_58714559
WTC11_00056947	chr20	+	2578	13	FSM	ENSG00000087460.29	ENST00000313949.11	2578	13	0	0	0	0	multi-exon	FALSE	canonical	3	1256	junction_1	1742.04961300379	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837100	True	NA	19	True	AATAAA	-21	NA	58839717	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58840887_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056948	chr20	+	1585	7	ISM	ENSG00000087460.29	ENST00000313949.11	2578	13	30	1976	0	0	5prime_fragment	FALSE	canonical	3	1256	junction_1	2030.44432055865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAACCCCTCCCCA	58837130	True	NA	NA	False	NA	NA	NA	58839747	58909216	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_58840887_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161
WTC11_00056949	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	1865.41719792492	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837130	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056950	chr20	+	2551	13	FSM	ENSG00000087460.29	ENST00000371075.7	2551	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2136.0505546972	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837130	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58840887_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056951	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	1952.68317358165	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58840698	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056952	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	2085.67831881783	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056954	chr20	+	1625	12	FSM	ENSG00000087460.29	ENST00000462499.6	1625	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2293.2636168851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58841876_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056957	chr20	+	4038	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	-11	0	-9	0	multi-exon	TRUE	canonical	3	126	junction_1	1958.77148821795	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852386	True	NA	19	True	AATAAA	-21	NA	58852704	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056958	chr20	+	3437	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	-5	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	2092.03021326728	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852942	False	NA	19	True	AATAAA	-21	NA	58853260	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056959	chr20	+	1587	13	FSM	ENSG00000087460.29	ENST00000467321.6	1563	13	-24	0	10	0	multi-exon	FALSE	canonical	3	41	junction_1	1976.10878158736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888836	False	NA	19	True	AATAAA	-21	NA	58888868	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889047_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056960	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	1883.09252885306	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888800	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056961	chr20	+	1817	12	FSM	ENSG00000087460.29	ENST00000485673.6	1793	12	-24	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.47548942	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888800	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889550_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056962	chr20	+	1622	13	FSM	ENSG00000087460.29	ENST00000470512.6	1622	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2246.69859491408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881089	True	NA	19	True	AATAAA	-21	NA	58889143	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056963	chr20	+	1598	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	-16	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1968.95443735727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881089	True	NA	19	True	AATAAA	-21	NA	58889143	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056964	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	2013.02736532659	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881116	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056965	chr20	+	3172	4	FSM	ENSG00000087460.29	ENST00000371081.5	730	4	-2489	47	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1211.78408417782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTAACATTCGTGATAA	58881172	False	NA	-26	True	AATATA	-1	NA	58889226	58900363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58899948
WTC11_00056966	chr20	+	662	3	FSM	ENSG00000087460.29	ENST00000484504.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	241.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	58881172	False	NA	21	True	AATAAA	-23	NA	58889226	58900410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58899948
WTC11_00056968	chr20	+	2313	13	FSM	ENSG00000087460.29	ENST00000683015.1	2313	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1982.87388761027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATGGGACTCCCGT	58881826	False	NA	14	True	AATAAA	-16	NA	58889880	58911187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58890790_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056969	chr20	+	1866	12	FSM	ENSG00000087460.29	ENST00000265620.11	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	1617.48718492247	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58889208	False	NA	19	True	AATAAA	-21	NA	58891363	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056970	chr20	+	1854	13	FSM	ENSG00000087460.29	ENST00000371085.8	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	2393	junction_2	1507.38622889277	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58883812	True	NA	19	True	AATAAA	-21	NA	58891420	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056972	chr20	+	1505	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	32	0	-9	0	multi-exon	FALSE	canonical	3	63	junction_1	2105.42180850668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892038	False	NA	19	True	AATAAA	-21	NA	58892068	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056973	chr20	+	3926	12	FSM	ENSG00000087460.29	ENST00000684284.1	3921	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	2393	junction_1	1386.6742960428	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATGGGACTCCCGT	58893075	False	NA	14	True	AATAAA	-16	NA	58893089	58911187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056975	chr20	+	6609	4	FSM	ENSG00000087460.29	ENST00000682986.1	6600	4	-9	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_3	239.139197028751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATTAAAAAAAATCAAAA	58902734	False	NA	-25	True	AATAAA	-42	NA	58902758	58911148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58909580_58909683
WTC11_00056977	chr20	+	3648	9	FSM	ENSG00000087460.29	ENST00000682411.1	3637	9	-11	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_5	336.887963572461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902734	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056978	chr20	+	2190	9	FSM	ENSG00000087460.29	ENST00000684466.1	2181	9	-9	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_5	322.603641292221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902734	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58905481_58909161_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056979	chr20	+	7329	8	FSM	ENSG00000087460.29	ENST00000683932.1	7318	8	-11	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_4	319.679495106954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902734	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056981	chr20	+	5738	9	FSM	ENSG00000087460.29	ENST00000682590.1	5729	9	-9	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_5	301.974647114621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902734	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056982	chr20	+	5871	8	FSM	ENSG00000087460.29	ENST00000684644.1	5862	8	-9	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_4	296.457107060247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902734	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056984	chr20	+	5751	8	FSM	ENSG00000087460.29	ENST00000682680.1	5743	8	-8	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_4	299.730559274935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58902807	False	NA	13	True	AATAAA	-15	NA	58902831	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903792_58905382_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056985	chr20	+	1839	10	FSM	ENSG00000087460.29	ENST00000476196.5	1839	10	0	0	0	0	multi-exon	FALSE	canonical	3	5469	junction_6	318.349718407095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	58902956	False	NA	17	True	AATAAA	-19	NA	58902980	58911190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00056988	chr20	+	2310	15	FSM	ENSG00000101158.15	ENST00000602795.6	2303	15	-7	0	-7	0	multi-exon	FALSE	canonical	3	392	junction_13	48.041064492276	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGATGTGACATTGT	58973636	True	NA	36	True	AGTAAA	-32	NA	58981200	58995131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
WTC11_00056993	chr20	+	2155	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	110	junction_13	106.180943945431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973684	True	NA	18	True	AGTAAA	-14	NA	58981248	58995113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
WTC11_00056996	chr20	+	3581	4	FSM	ENSG00000101158.15	ENST00000478389.5	3581	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_2	33.6683167912439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	58990070	False	NA	38	True	AGTAAA	-34	NA	58990094	58995133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58992021_58992997_58993545_58993623_58994240_58994641
WTC11_00057001	chr20	+	923	5	FSM	ENSG00000087495.17	ENST00000492611.5	1585	5	652	10	652	-8	multi-exon	FALSE	canonical	2	2	junction_3	0.433012701892219	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATTAACCCAGGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	59836504	59847701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59836561_59840368_59840431_59841394_59841536_59845188_59845266_59847114
WTC11_00057002	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6562449087639	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	59938909	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
WTC11_00057003	chr20	+	419	3	FSM	ENSG00000196227.11	ENST00000421092.1	419	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAAGCATTTCCCCGG	59942109	False	NA	NA	False	AAGAAA	-5	NA	59942123	59944086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59942310_59942426_59942513_59943939
WTC11_00057004	chr20	+	584	3	FSM	ENSG00000124215.17	ENST00000477058.1	597	3	13	0	13	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGATAAGGTGAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	59986026	59989153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59986175_59987452_59987639_59988903
WTC11_00057005	chr20	+	6687	16	FSM	ENSG00000179242.16	ENST00000614565.5	6678	16	-9	0	-9	0	multi-exon	FALSE	canonical	3	18	junction_15	5.07893252126424	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCATCGTCCTGGCTTG	61250833	True	NA	10	True	AATAAA	-17	NA	61252251	61940617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_61252571_61254825_61254938_61743562_61743790_61773002_61773183_61844667_61844824_61852753_61852899_61873727_61873901_61894909_61895048_61910421_61910608_61923450_61923705_61924333_61924477_61928189_61928424_61929608_61929843_61932984_61933125_61934055_61934221_61936736
WTC11_00057006	chr20	+	2598	9	FSM	ENSG00000149657.20	ENST00000279068.11	2576	9	-22	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_2	4.05431868505671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCTGATGCTCTA	62112759	True	NA	18	True	AATAAA	-18	NA	62122452	62135374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62122794_62124616_62124781_62126303_62126440_62129784_62129953_62130218_62130297_62130529_62130692_62131355_62131507_62133289_62133476_62134162
WTC11_00057007	chr20	+	2755	10	NIC	ENSG00000149657.20	novel	2576	9	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	5.05769185632935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCTGATGCTCTA	62112719	True	NA	18	True	AATAAA	-18	NA	62122412	62135374	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62122794_62124616_62124781_62126303_62126440_62127584_62127702_62129784_62129953_62130218_62130297_62130529_62130692_62131355_62131507_62133289_62133476_62134162
WTC11_00057008	chr20	+	4299	12	NIC	ENSG00000184402.15	novel	4549	11	NA	NA	-110	452	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	6.1064929540897	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCAAGCCTTGGGCTT	62143419	False	NA	NA	False	NA	NA	NA	62143658	62182966	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181_62179357_62180168
WTC11_00057009	chr20	+	4549	11	FSM	ENSG00000184402.15	ENST00000331758.8	4549	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	6.36003144646314	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGATTTTGGTGTGATGTG	62142381	True	NA	38	True	TATAAA	-21	NA	62143768	62182514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181
WTC11_00057010	chr20	+	781	5	FSM	ENSG00000184402.15	ENST00000450482.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.45576726264388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGGCGGGGGAGGA	62142407	False	NA	NA	False	NA	NA	NA	62143794	62161580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62143890_62154280_62154466_62158671_62158943_62159876_62159962_62161435
WTC11_00057011	chr20	+	1238	9	FSM	ENSG00000184402.15	ENST00000370848.8	1238	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	6.07762289057161	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACTTGAGTAATTTT	62161406	False	NA	-3	True	AGTAAA	-11	NA	62161417	62180280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181_62179357_62180168
WTC11_00057012	chr20	+	899	7	FSM	ENSG00000184402.15	ENST00000492466.2	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	6.69991708074726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAGTAATTTTTACA	62163447	False	NA	1	True	AGTAAA	-15	NA	62163457	62180284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181_62179357_62180168
WTC11_00057013	chr20	+	800	4	FSM	ENSG00000101181.18	ENST00000471352.5	785	4	-17	2	-3	-2	multi-exon	FALSE	canonical	1	28	junction_3	25.1705295048705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAGCCGACCTCTGAC	62181427	True	NA	NA	False	AAAAAG	-39	NA	62183024	62198261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851
WTC11_00057014	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_3	22.9401394939089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181430	True	NA	16	True	CATAAA	-19	NA	62183027	62203568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
WTC11_00057016	chr20	+	3510	8	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_3	21.6163203650031	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181427	True	NA	16	True	CATAAA	-19	NA	62183024	62203568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682_62202844_62203083
WTC11_00057017	chr20	+	3961	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	-17	0	-1	0	multi-exon	FALSE	canonical	3	232	junction_12	18.3280429878182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	62233448	True	NA	7	True	AATAAA	-17	NA	62238503	62296183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
WTC11_00057020	chr20	+	1307	9	FSM	ENSG00000130703.17	ENST00000644189.1	1329	9	0	22	0	-22	multi-exon	FALSE	canonical	3	17	junction_1	87.3061244988002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGGGTATTTTTGAA	62233893	False	NA	-17	True	CATAAA	-4	NA	62238948	62282069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62239066_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
WTC11_00057023	chr20	+	1799	11	NNC	ENSG00000130706.13	novel	1530	11	NA	NA	-298	40431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	742.69188766271	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTGAGTCCTGAGCAAGAA	62302546	False	NA	NA	False	NA	NA	NA	62302597	62349293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654_62308859_62349268
WTC11_00057024	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	732.059594568639	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	62302870	False	NA	17	True	AATAAA	-20	NA	62302895	62308860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
WTC11_00057025	chr20	+	1428	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	-49	0	49	multi-exon	FALSE	canonical	3	1925	junction_6	217.208098432566	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGCTGTAGGGTC	62278195	True	NA	68	True	NA	NA	NA	62302996	62308911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
WTC11_00057028	chr20	+	463	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	-34	0	-14	0	multi-exon	FALSE	canonical	3	5559	junction_1	962.731368295435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260487	True	NA	13	True	AATAAA	-13	NA	62387088	62388519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
WTC11_00057029	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	4434	junction_5	1373.06649511231	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	62260501	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
WTC11_00057030	chr20	+	439	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	-21	0	0	0	multi-exon	FALSE	canonical	3	7051	junction_3	412.002427177317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260695	False	NA	13	True	AATAAA	-13	NA	62387296	62388519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
WTC11_00057031	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	16.1828396000412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639808	True	NA	15	True	AATATA	-19	NA	62642502	62672293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
WTC11_00057032	chr20	+	3109	10	FSM	ENSG00000101187.16	ENST00000497209.5	3092	10	-17	0	0	0	multi-exon	FALSE	canonical	3	118	junction_9	17.3169438184073	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639808	True	NA	15	True	AATATA	-19	NA	62642502	62672293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62668542_62668929_62669079_62671749
WTC11_00057034	chr20	+	3699	2	NIC	ENSG00000101187.16	novel	856	4	NA	NA	-491	0	intron_retention	FALSE	canonical	3	118	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62665907	False	NA	15	True	AATATA	-19	NA	62665923	62672293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62669079_62671749
WTC11_00057039	chr20	+	2760	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	221	junction_4	22.0963797939844	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	62792817	True	NA	3	True	AATAAA	-16	NA	62796464	62801729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
WTC11_00057040	chr20	+	2431	7	FSM	ENSG00000060491.17	ENST00000290291.10	2410	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	127	junction_2	10.9455724179028	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801239	True	NA	19	True	AATAAA	-16	NA	62804813	62814000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
WTC11_00057041	chr20	+	4506	5	FSM	ENSG00000060491.17	ENST00000370461.5	4506	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	10.4163333279998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62805858	False	NA	19	True	AATAAA	-16	NA	62805885	62814000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
WTC11_00057042	chr20	+	553	4	FSM	ENSG00000060491.17	ENST00000450048.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	8.33999733546454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGGTGAGCCAGGCCTTG	62807245	False	NA	NA	False	NA	NA	NA	62807272	62810560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62807606_62808246_62808326_62809584_62809664_62810498
WTC11_00057043	chr20	+	2463	32	NIC	ENSG00000092758.18	novel	838	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	74	junction_1	69.1244635944587	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	62815506	True	NA	1	True	AATAAA	-17	NA	62816243	62841144	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
WTC11_00057044	chr20	+	626	12	FSM	ENSG00000092758.18	ENST00000477612.5	635	12	0	9	0	-9	multi-exon	FALSE	canonical	3	74	junction_1	75.5446340618392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGCTGCCGCACAGCAG	62815506	True	NA	NA	False	NA	NA	NA	62816243	62825021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967
WTC11_00057045	chr20	+	2482	32	FSM	ENSG00000092758.18	ENST00000649368.1	2497	32	0	15	0	0	multi-exon	FALSE	canonical	3	235	junction_1	51.1795923819131	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	62812134	True	NA	1	True	AATAAA	-17	NA	62817049	62841144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62817143_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
WTC11_00057047	chr20	+	2212	8	FSM	ENSG00000092758.18	ENST00000466192.5	2194	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	392	junction_1	36.8488362732648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	62831109	False	NA	1	True	AATAAA	-17	NA	62831121	62841144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
WTC11_00057051	chr20	+	1528	3	FSM	ENSG00000092758.18	ENST00000466532.1	539	3	-503	-486	0	0	multi-exon	FALSE	canonical	3	433	junction_2	39.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	62836372	False	NA	1	True	AATAAA	-17	NA	62836418	62841144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62837266_62838683_62838762_62840541
WTC11_00057052	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	10.0840220150494	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	62932523	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
WTC11_00057053	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	66.1879160926403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950700	True	NA	5	True	ATTAAA	-15	NA	62952706	62968597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
WTC11_00057054	chr20	+	3333	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	-2	187	0	-187	multi-exon	FALSE	canonical	3	127	junction_5	28.9581834528495	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCATTCCACTTTGTGTC	62950700	True	NA	NA	False	ATTAAA	-36	NA	62952706	62969398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
WTC11_00057055	chr20	+	507	2	FSM	ENSG00000101194.18	ENST00000487303.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGGCAGGTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	62963128	62963849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62963370_62963583
WTC11_00057056	chr20	+	2187	1	FSM	ENSG00000273821.1	ENST00000615354.1	462	1	-1667	-58	-1667	58	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTCACAGTGATGCCTA	63216205	True	NA	57	True	NA	NA	NA	63216373	63218560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63216400_63218600
WTC11_00057057	chr20	+	573	4	FSM	ENSG00000101199.13	ENST00000522959.5	556	4	-17	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	13.6950923894494	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTCTTCTGCTGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	63272784	63276742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479
WTC11_00057058	chr20	+	3264	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	-16	2	0	0	multi-exon	FALSE	canonical	3	313	junction_11	41.709311510341	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	63265270	True	NA	16	True	AATAAA	-16	NA	63272796	63289788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
WTC11_00057059	chr20	+	3176	12	FSM	ENSG00000101199.13	ENST00000519273.6	3176	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	112.554119214119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCTGGATGCATCCC	NA	False	NA	17	True	AATAAA	-17	NA	63272784	63289789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
WTC11_00057060	chr20	+	995	6	FSM	ENSG00000101199.13	ENST00000524192.6	980	6	-15	0	-1	0	multi-exon	FALSE	canonical	3	320	junction_5	38.420827684994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAGCATAACACAT	63265283	True	NA	NA	False	NA	NA	NA	63272809	63278553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116
WTC11_00057061	chr20	+	1509	9	FSM	ENSG00000101199.13	ENST00000519531.5	1490	9	-19	0	-1	0	multi-exon	FALSE	canonical	3	320	junction_5	40.3198152277512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCGTCACCCCCGTGG	63265283	True	NA	NA	False	NA	NA	NA	63272809	63283528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818
WTC11_00057062	chr20	+	907	11	FSM	ENSG00000101199.13	ENST00000522403.6	995	11	88	0	-26	0	multi-exon	FALSE	canonical	2	5	junction_1	112.752339221854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATTTTTGATGATGTC	63265765	False	NA	NA	False	NA	NA	NA	63273291	63285663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63273411_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653
WTC11_00057063	chr20	+	1162	2	FSM	ENSG00000101199.13	ENST00000518691.1	1162	2	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCCTGCCTAACCTCT	63284422	False	NA	NA	False	NA	NA	NA	63284434	63286327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63284923_63285653
WTC11_00057065	chr20	+	1002	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	-535	11	-523	0	multi-exon	FALSE	canonical	3	54	junction_1	506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCTCTCCCCACTCCG	63520052	True	NA	NA	False	NA	NA	NA	63520241	63521938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63520895_63521511_63521590_63521667
WTC11_00057066	chr20	+	1429	3	FSM	ENSG00000125534.10	ENST00000370177.1	627	3	-533	-269	-523	1	multi-exon	FALSE	canonical	3	961	junction_1	11.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGTGAGAAATGGCTG	63520052	True	NA	14	True	NA	NA	NA	63520241	63522207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63520895_63521283_63521364_63521511
WTC11_00057067	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	45.0653845971483	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	63505971	True	NA	13	True	NA	NA	NA	63520764	63522206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
WTC11_00057068	chr20	+	2751	1	FSM	ENSG00000125531.7	ENST00000615526.1	2954	1	203	0	203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATGGAATTAAAGAAGC	63553853	False	NA	4	True	AATAAA	-16	NA	63553917	63556668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63553900_63556700
WTC11_00057069	chr20	+	799	2	FSM	ENSG00000232442.2	ENST00000449500.2	826	2	25	2	0	2	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGTGCTGAGGGGG	63626819	True	NA	3	True	AATAAA	-14	NA	63627226	63628822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63627393_63628189
WTC11_00057070	chr20	+	4925	35	FSM	ENSG00000258366.11	ENST00000370018.7	4955	35	30	0	30	0	multi-exon	TRUE	canonical	0	0	junction_32	32.4698422761714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTGGCCTGGGCTTGG	63657791	False	NA	16	True	AATAAA	-26	NA	63657839	63696253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777
WTC11_00057071	chr20	+	4615	35	FSM	ENSG00000258366.11	ENST00000360203.11	4615	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	29.0504274605407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	63656281	True	NA	8	True	AATAAA	-18	NA	63658311	63696245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
WTC11_00057073	chr20	+	4271	34	NIC	ENSG00000258366.11	novel	4615	35	NA	NA	687	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	36.6080673742533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGGTGTCTTCGTGGC	63659347	False	NA	6	True	AATAAA	-16	NA	63659362	63696243	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690143_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
WTC11_00057075	chr20	+	5751	20	FSM	ENSG00000026036.22	ENST00000480273.5	5751	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	56.4168792643476	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTAGTTGCACAGCT	NA	False	NA	NA	False	TATAAA	-15	NA	63686370	63698684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777_63697192_63697327_63697523_63698279
WTC11_00057077	chr20	+	2273	11	FSM	ENSG00000258366.11	ENST00000370003.2	2273	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.8307280306161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCGTGGCCTGGG	63689942	False	NA	11	True	AATAAA	-21	NA	63689965	63696248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
WTC11_00057079	chr20	+	1936	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	-47	1	0	0	multi-exon	FALSE	canonical	3	69	junction_1	63.894878946247	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705409	True	NA	20	True	ATTAAA	-20	NA	63708038	63736141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
WTC11_00057080	chr20	+	2842	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	-11	0	-11	0	multi-exon	TRUE	canonical	3	89	junction_1	61.9561134997992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705398	True	NA	20	True	ATTAAA	-20	NA	63708027	63736141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
WTC11_00057081	chr20	+	1878	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	89	junction_1	57.3323643328967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705398	True	NA	21	True	ATTAAA	-21	NA	63708027	63736142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
WTC11_00057083	chr20	+	4400	11	NIC	ENSG00000273154.3	novel	3119	11	NA	NA	-825	0	intron_retention	FALSE	canonical	3	16	junction_8	95.9598353479204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63705409	True	NA	8	True	AATAAA	-23	NA	63708038	63739103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780_63737648_63737820_63737903_63738007_63738061_63738182_63738500_63738597
WTC11_00057085	chr20	+	3119	11	FSM	ENSG00000273154.3	ENST00000490623.3	3119	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	101.535264809819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63708849	False	NA	8	True	AATAAA	-23	NA	63708863	63739103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780_63736713_63737532_63737648_63737820_63737903_63738007_63738061_63738182_63738500_63738597
WTC11_00057087	chr20	+	1164	6	FSM	ENSG00000203896.10	ENST00000309546.8	1157	6	-7	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.9624559513879	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63736628	False	NA	8	True	AATAAA	-23	NA	63736656	63739103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63736713_63737532_63737648_63737820_63737903_63737972_63738061_63738182_63738500_63738597
WTC11_00057089	chr20	+	2377	8	FSM	ENSG00000125520.14	ENST00000266077.5	2361	8	-16	0	-16	0	multi-exon	TRUE	canonical	3	87	junction_1	43.4074196610747	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGCACCCTCACTACA	63738389	True	NA	122	True	AATAAA	-16	NA	63739759	63744050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63740039_63740376_63740532_63741369_63741480_63741868_63742057_63742129_63742231_63742335_63742616_63742698_63742791_63742878
WTC11_00057090	chr20	+	609	4	FSM	ENSG00000125520.14	ENST00000474248.5	624	4	15	0	15	0	multi-exon	FALSE	canonical	3	152	junction_1	22.4251842554055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGGAAGGTGCTGAGC	63739738	True	NA	NA	False	NA	NA	NA	63740257	63742166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129
WTC11_00057091	chr20	+	1650	7	ISM	ENSG00000125520.14	ENST00000266077.5	2361	8	504	545	37	0	3prime_fragment	FALSE	canonical	3	152	junction_1	22.1484887871736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63739760	True	NA	21	True	ATTAAA	-21	NA	63740279	63743505	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129_63742231_63742335_63742616_63742698_63742791_63742878
WTC11_00057092	chr20	+	548	2	FSM	ENSG00000125520.14	ENST00000482718.1	541	2	-7	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCGCCCCTGCCCCCG	63741904	False	NA	NA	False	NA	NA	NA	63741914	63742535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63742057_63742129
WTC11_00057094	chr20	+	2301	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	-71	7	-9	0	multi-exon	FALSE	canonical	3	406	junction_3	154.484173946719	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	63857548	True	NA	29	True	AATAAA	-19	NA	63865218	63891538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
WTC11_00057095	chr20	+	2435	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	-103	7	-41	0	multi-exon	FALSE	canonical	3	29	junction_5	320.195794692522	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	NA	False	NA	29	True	AATAAA	-19	NA	63865186	63891538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
WTC11_00057096	chr20	+	2321	6	FSM	ENSG00000101150.18	ENST00000615907.4	2310	6	-9	-2	-9	2	multi-exon	FALSE	canonical	3	103	junction_5	274.325645902821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTGATGTATCGTT	63857548	True	NA	38	True	AATAAA	-28	NA	63865218	63891547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889849
WTC11_00057097	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	224.830800578766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	63857599	True	NA	29	True	AATAAA	-19	NA	63865269	63891538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
WTC11_00057098	chr20	+	2299	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	-24	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	334.198751576896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857599	True	NA	36	True	AATAAA	-26	NA	63865269	63891545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
WTC11_00057099	chr20	+	6825	2	FSM	ENSG00000101150.18	ENST00000474176.2	4053	2	-2782	10	-2782	-3	multi-exon	FALSE	canonical	3	841	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCGCCTCGGCTTGTG	NA	False	NA	26	True	AATAAA	-16	NA	63884099	63891535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63889239_63889849
WTC11_00057100	chr20	+	5340	5	FSM	ENSG00000101152.11	ENST00000360864.9	5249	5	-91	0	-91	0	multi-exon	FALSE	canonical	3	55	junction_4	21.3585462988472	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCACTGCGGACCCCA	63895021	False	NA	16	True	AATAAA	-21	NA	63895034	63936011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931464
WTC11_00057101	chr20	+	5285	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	2	0	-2	multi-exon	FALSE	canonical	3	36	junction_4	28.1040922287129	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTATGTCTTACTCGCTA	63894436	True	NA	34	True	AATAAA	-39	NA	63895181	63936029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
WTC11_00057102	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_11	84.1808172923024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	63969835	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
WTC11_00057103	chr20	+	2921	20	NIC	ENSG00000101161.8	novel	3047	21	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	14	junction_14	169.273696974854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAACAGGCAGCCTGCTG	63969835	True	NA	17	True	ATTAAA	-18	NA	63981131	64033094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
WTC11_00057104	chr20	+	3072	22	NNC	ENSG00000101161.8	novel	3047	21	NA	NA	0	10337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	163.960381808293	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGTGAGACCCTGCGCC	63969835	True	NA	NA	False	AAAAAG	-3	NA	63981131	64043437	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840_64033095_64043406
WTC11_00057105	chr20	+	664	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	-243	0	-205	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	NA	False	NA	8	True	AATAAA	-17	NA	64062952	64064123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64063385_64063891
WTC11_00057106	chr20	+	1733	8	FSM	ENSG00000171703.17	ENST00000395053.7	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_4	40.2907798233729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTCCTCAGCCGT	64060448	True	NA	15	True	ATTAAA	-15	NA	64063157	64072346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070636_64071869_64071942_64072171
WTC11_00057107	chr20	+	1184	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	-2	0	0	0	multi-exon	FALSE	canonical	2	182	junction_6	68.7336961588297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060486	True	NA	16	True	ATTAAA	-16	NA	64063195	64072347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
WTC11_00057110	chr20	+	2345	8	FSM	ENSG00000171703.17	ENST00000465111.5	2357	8	12	0	12	0	multi-exon	FALSE	canonical	3	311	junction_3	40.7691359851983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTTCTCCTCAGCCG	64065535	False	NA	14	True	ATTAAA	-14	NA	64065561	64072345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070415_64070488_64070636_64071869_64071942_64072171
WTC11_00057112	chr20	+	822	2	FSM	ENSG00000171703.17	ENST00000461072.5	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTCCTCAGCCGT	64070270	True	NA	15	True	ATTAAA	-15	NA	64070290	64072346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64070636_64071869
WTC11_00057114	chr20	+	3234	6	FSM	ENSG00000203880.12	ENST00000369758.8	3212	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	39	junction_4	143.132945194319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCGCACCTTATAC	NA	False	NA	14	True	AATAAA	-15	NA	64255718	64275653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267967_64268011_64273220
WTC11_00057115	chr20	+	3866	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	-7	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	50.2633066958393	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	64252778	True	NA	10	True	AATAAA	-18	NA	64255740	64276226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
WTC11_00057116	chr20	+	572	4	FSM	ENSG00000203880.12	ENST00000609764.1	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	174.513291439045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGTAAGATGAAATACT	64252881	True	NA	NA	False	NA	NA	NA	64255843	64264526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255871_64258766_64258883_64259941_64260273_64264428
WTC11_00057119	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	69.173581481661	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287973	True	NA	-13	True	AATAAA	-18	NA	290429	270862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
WTC11_00057120	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	78.4199591940725	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-290652	True	NA	-13	True	AATAAA	-18	NA	290750	270862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
WTC11_00057121	chr20	-	1538	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	321	0	0	0	3prime_fragment	FALSE	canonical	3	108	junction_2	60.9573824006232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287973	True	NA	-13	True	AATAAA	-18	NA	290429	270862	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
WTC11_00057122	chr20	-	393	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	345	18568	24	-18568	internal_fragment	FALSE	canonical	3	115	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGATATAGAAGTTTAT	-287949	True	NA	-6	True	AATAAA	-18	NA	290405	289430	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_289677_290258
WTC11_00057123	chr20	-	4217	14	NNC	ENSG00000101266.19	novel	12984	14	NA	NA	0	45682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.493488966563	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGTAAAAAGAA	-525537	True	NA	NA	False	AAAAAG	-1	NA	543727	426815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_426843_481111_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
WTC11_00057124	chr20	-	7278	3	FSM	ENSG00000125875.15	ENST00000680815.1	7261	3	0	-17	0	0	multi-exon	FALSE	canonical	3	131	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	443975	435479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247
WTC11_00057125	chr20	-	4449	8	FSM	ENSG00000125875.15	ENST00000354200.5	4446	8	0	-3	0	3	multi-exon	FALSE	canonical	3	116	junction_4	14.1392491790384	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCCA	-460339	True	NA	-7	True	AATAAA	-17	NA	462533	435476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
WTC11_00057128	chr20	-	5809	6	FSM	ENSG00000125875.15	ENST00000680491.1	5792	6	0	-17	0	0	multi-exon	FALSE	canonical	3	117	junction_4	11.9431989014669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	-460337	True	NA	-10	True	AATAAA	-14	NA	462531	435479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247_442044_445049_445131_447888_448075_462335
WTC11_00057136	chr20	-	2846	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	-24	0	14	multi-exon	FALSE	canonical	3	11	junction_1	212.686423621489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTTTCATCTGTCACT	-525542	True	NA	10	True	NA	NA	NA	543732	472483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
WTC11_00057139	chr20	-	12998	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	-14	0	14	multi-exon	FALSE	canonical	3	51	junction_12	269.9979618595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTTTCATCTGTCACT	-525600	True	NA	10	True	NA	NA	NA	543790	472483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
WTC11_00057140	chr20	-	12912	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	14	-14	-5	14	multi-exon	FALSE	canonical	3	663	junction_12	64.1501602145743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTTTCATCTGTCACT	-525631	True	NA	10	True	NA	NA	NA	543821	472483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
WTC11_00057142	chr20	-	4293	14	FSM	ENSG00000101266.19	ENST00000645910.1	4290	14	0	-3	0	0	multi-exon	FALSE	canonical	2	3	junction_10	285.650177084908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAATTTTTTTTAATAA	-525569	True	NA	-6	True	ACTAAA	-37	NA	543759	481146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_508450_508661_543671
WTC11_00057150	chr20	-	2552	3	NNC	ENSG00000271303.2	novel	2528	2	NA	NA	2	64620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	355	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGACCTTCTAATCATTC	-649739	True	NA	NA	False	NA	NA	NA	653198	581994	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_582021_646614_648918_652975
WTC11_00057151	chr20	-	1006	2	FSM	ENSG00000125878.7	ENST00000246080.4	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCGTTCTGAGCTGAGG	-610071	True	NA	-17	True	AATAAA	-19	NA	610309	604256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_604666_609712
WTC11_00057152	chr20	-	2529	2	FSM	ENSG00000271303.2	ENST00000381962.4	2528	2	0	-1	0	1	multi-exon	FALSE	canonical	3	710	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGTGTGCAATTCCTTT	-649741	True	NA	0	True	AATAAA	-27	NA	653200	646613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_648918_652975
WTC11_00057153	chr20	-	3057	4	FSM	ENSG00000101276.18	ENST00000381944.5	3206	4	151	-2	18	2	multi-exon	FALSE	canonical	3	26	junction_3	13.1233464566864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATCTTCCTTCAAAGG	-768111	False	NA	-5	True	AATAAA	-20	NA	768482	760077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_761825_763497_764004_765207_765826_768296
WTC11_00057156	chr20	-	301	1	FSM	ENSG00000101278.6	ENST00000492704.1	531	1	17	213	17	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGCCGTCCAGAGACTGG	-839946	False	NA	NA	False	NA	NA	NA	839960	839659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_839700_840000
WTC11_00057157	chr20	-	2753	5	FSM	ENSG00000101282.9	ENST00000217260.9	2757	5	0	4	0	-4	multi-exon	FALSE	canonical	3	7	junction_1	7.28010988928052	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTTCTTGAGCATCA	-1002074	True	NA	-9	True	AATAAA	-16	NA	1002311	958455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_960467_963934_964121_967173_967315_967949_968139_1002085
WTC11_00057158	chr20	-	722	4	FSM	ENSG00000101282.9	ENST00000400634.2	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTCTCTTTCTTTCC	-1002217	False	NA	NA	False	NA	NA	NA	1002264	960253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_960467_967173_967315_967949_968139_1002085
WTC11_00057159	chr20	-	1721	2	FSM	ENSG00000125895.6	ENST00000381894.3	1730	2	0	9	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGAGGATGAGGTTT	-1184386	False	NA	-8	True	AATACA	-18	NA	1184473	1180569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1181588_1183770
WTC11_00057160	chr20	-	1152	2	NNC	ENSG00000125895.6	novel	1730	2	NA	NA	-131	-22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAAGTTTGGAAACCG	-1185459	False	NA	-30	True	NA	NA	NA	1185546	1180591	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_1181588_1185390
WTC11_00057161	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.1234753829798	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	-1313431	True	NA	NA	False	AATAAA	-20	NA	1313639	1309974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
WTC11_00057162	chr20	-	1578	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	1	0	0	multi-exon	FALSE	canonical	3	2934	junction_1	149.622487911707	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363078	True	NA	-6	True	AATAAA	-25	NA	1393038	1368977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
WTC11_00057163	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_4	263.802009090151	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363094	True	NA	-6	True	AATAAA	-25	NA	1393054	1368977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
WTC11_00057165	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1463.7313809424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363148	True	NA	-6	True	AATAAA	-25	NA	1393108	1368977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
WTC11_00057166	chr20	-	1591	6	FSM	ENSG00000088832.18	ENST00000678136.1	1591	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	1441.085785094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	-1363094	True	NA	-11	True	AATAAA	-20	NA	1393054	1368982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1377429_1377512_1392833_1392882_1392961
WTC11_00057167	chr20	-	3581	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	-17	0	0	multi-exon	FALSE	canonical	3	2573	junction_3	303.611959945952	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	-1363163	True	NA	-11	True	AATAAA	-20	NA	1393123	1368982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
WTC11_00057168	chr20	-	2199	5	FSM	ENSG00000088832.18	ENST00000678408.1	2199	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1311.94443003505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAAGCCTTCTTTGTG	-1363143	True	NA	NA	False	NA	NA	NA	1393103	1369416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1371148_1372075_1372241_1375490_1375604_1392833_1392882_1392961
WTC11_00057174	chr20	-	3795	7	FSM	ENSG00000088833.18	ENST00000461211.5	3799	7	0	4	0	0	multi-exon	FALSE	canonical	0	0	junction_6	378.306496845555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-1445528	False	NA	0	True	ATTAAA	-18	NA	1457090	1442165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713
WTC11_00057176	chr20	-	2723	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	-2	0	-2	multi-exon	FALSE	canonical	3	700	junction_6	109.321772762794	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTACTTTCTAATG	-1455287	True	NA	2	True	ATTAAA	-20	NA	1466849	1442163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
WTC11_00057177	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	410.37951573973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455343	True	NA	4	True	ATTAAA	-22	NA	1466905	1442161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
WTC11_00057178	chr20	-	2796	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	4	0	0	multi-exon	FALSE	canonical	0	0	junction_6	408.401702515163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-1455356	True	NA	0	True	ATTAAA	-18	NA	1466918	1442165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
WTC11_00057179	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	311.842808959899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	-1455262	True	NA	NA	False	NA	NA	NA	1466824	1443734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
WTC11_00057184	chr20	-	905	8	NNC	ENSG00000125835.20	novel	985	8	NA	NA	0	91095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1896.34224716093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCTCACCTGGCAACG	-2435032	True	NA	NA	False	AAAAAG	-1	NA	2470732	2370538	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_2370565_2461641_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
WTC11_00057185	chr20	-	1051	8	NNC	ENSG00000125835.20	novel	1082	7	NA	NA	0	91095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1734.75729055763	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCTCACCTGGCAACG	-2435032	True	NA	NA	False	AAAAAG	-1	NA	2470732	2370538	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_2370565_2461641_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
WTC11_00057186	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3337	junction_1	655.225851647099	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-2435089	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
WTC11_00057187	chr20	-	1013	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	-5	0	5	multi-exon	FALSE	canonical	3	1774	junction_1	1204.088728735	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCTTTATTTTTAGAAAA	-2435153	True	NA	NA	False	AATAAA	-31	NA	2470853	2461628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
WTC11_00057189	chr20	-	3435	6	NNC	ENSG00000088876.13	novel	3415	6	NA	NA	977	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	12.5634390196315	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAACTTGTTTTATTTTC	-2507906	False	NA	NA	False	AATAAA	-32	NA	2507924	2481815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2507870
WTC11_00057190	chr20	-	681	6	FSM	ENSG00000101365.21	ENST00000466494.6	677	6	0	-4	0	4	multi-exon	FALSE	canonical	3	57	junction_1	272.415564900393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGTTTTTATTGG	-2648078	False	NA	-1	True	AATAAA	-18	NA	2660308	2658390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262
WTC11_00057191	chr20	-	964	5	FSM	ENSG00000101365.21	ENST00000492240.5	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	299.764490892434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2648129	False	NA	-5	True	AATAAA	-14	NA	2660359	2658394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2660177_2660262
WTC11_00057192	chr20	-	1620	11	FSM	ENSG00000101365.21	ENST00000488299.5	1620	11	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_1	76.2194856975564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651958	True	NA	-5	True	AATAAA	-14	NA	2664188	2658394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
WTC11_00057193	chr20	-	1283	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	-4	0	4	multi-exon	FALSE	non_canonical	0	0	junction_1	220.847609601432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGTTTTTATTGG	-2651959	True	NA	-1	True	AATAAA	-18	NA	2664189	2658390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
WTC11_00057194	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_1	72.8308353550362	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651986	True	NA	-5	True	AATAAA	-14	NA	2664216	2658394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
WTC11_00057195	chr20	-	1234	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	-4	0	4	multi-exon	FALSE	canonical	3	163	junction_1	184.563545911263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGTTTTTATTGG	-2651989	False	NA	-1	True	AATAAA	-18	NA	2664219	2658390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
WTC11_00057199	chr20	-	823	5	FSM	ENSG00000101365.21	ENST00000491065.1	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_4	67.3591122269289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGGGGCGGGGCAAGG	-2651979	True	NA	NA	False	NA	NA	NA	2664209	2660504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
WTC11_00057200	chr20	-	2381	14	FSM	ENSG00000088882.8	ENST00000380605.3	2376	14	0	-5	0	5	multi-exon	TRUE	canonical	3	241	junction_6	37.6637254266987	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTGTTGTCTCTGTGC	-2794235	True	NA	-2	True	ATTAAA	-22	NA	2800627	2794068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796444_2796526_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
WTC11_00057201	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	14.577029735799	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840133	True	NA	-1	True	AATAAA	-25	NA	2840655	2835313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
WTC11_00057203	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	21.7613316585993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3160164	False	NA	0	True	AATAAA	-17	NA	3160196	3107572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
WTC11_00057204	chr20	-	4055	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	600	19519	intron_retention	FALSE	non_canonical	0	0	junction_1	118.868362064933	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGATTAACCTGCTA	-3166905	False	NA	NA	False	NA	NA	NA	3167961	3143097	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3143124_3162627_3165153_3165496_3166361_3166704_3167182_3167798
WTC11_00057205	chr20	-	2843	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	-1	0	1	multi-exon	FALSE	canonical	3	224	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTGGATTTTTCTTT	-3154860	True	NA	0	True	AATAAA	-30	NA	3159865	3146517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3149261_3159765
WTC11_00057207	chr20	-	7181	3	FSM	ENSG00000088899.16	ENST00000329152.7	5257	3	-1924	0	-1924	0	multi-exon	FALSE	canonical	3	230	junction_2	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3169429	False	NA	-3	True	AATAAA	-25	NA	3170485	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3165153_3165496_3166361_3166704
WTC11_00057209	chr20	-	4055	6	FSM	ENSG00000088899.16	ENST00000360342.7	4055	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	97.1378402065848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172490	True	NA	-3	True	AATAAA	-25	NA	3173546	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3165153_3165496_3165629_3165766_3166361_3166704_3167182_3167737_3167962_3173454
WTC11_00057210	chr20	-	4196	5	FSM	ENSG00000088899.16	ENST00000337576.7	4196	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	92.361720967076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172493	True	NA	-3	True	AATAAA	-25	NA	3173549	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3173454
WTC11_00057211	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.1731944953718	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-3194549	True	NA	-4	True	AAGAAA	-20	NA	3204682	3190349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
WTC11_00057212	chr20	-	1107	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_5	167.121914706001	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGGTGTGGCTTGGTG	-3194528	True	NA	-3	True	ATTAAA	-18	NA	3204661	3190521	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195351_3200000_3200103_3200341_3200455_3203212_3203417_3204536
WTC11_00057213	chr20	-	1128	7	FSM	ENSG00000198171.13	ENST00000380201.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	38.4783488904258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCAGGGCCCAGGACCA	-3194552	True	NA	NA	False	NA	NA	NA	3204685	3191423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
WTC11_00057214	chr20	-	5217	19	FSM	ENSG00000088836.14	ENST00000380056.7	3094	19	-1883	-240	-51	240	multi-exon	FALSE	canonical	3	73	junction_13	22.7583250267829	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGAGCGAGGGCTTG	NA	False	NA	NA	False	NA	NA	NA	3239610	3227176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543
WTC11_00057216	chr20	-	3051	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	-5	0	0	multi-exon	FALSE	canonical	3	70	junction_19	24.3187512436363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	-3238259	True	NA	-5	True	AATAAA	-22	NA	3239190	3227416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
WTC11_00057219	chr20	-	3323	1	ISM	ENSG00000088854.13	ENST00000252032.10	6912	37	155040	1	63461	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGCCTCCAGACGATG	NA	False	NA	-12	True	AATAAA	-14	NA	3252629	3249306	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_3249300_3252600
WTC11_00057220	chr20	-	1435	5	FSM	ENSG00000088854.13	ENST00000619760.1	2151	5	305	411	305	-411	multi-exon	FALSE	canonical	3	16	junction_1	2.38484800354236	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATTGACGGCACTGGC	NA	False	NA	NA	False	NA	NA	NA	3315785	3295904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3296950_3298028_3298176_3304439_3304544_3315032_3315121_3315734
WTC11_00057221	chr20	-	371	1	FSM	ENSG00000230568.1	ENST00000446317.1	1477	1	280	826	280	-826	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGACCTTCCTGGAT	NA	False	NA	NA	False	AAGAAA	-5	NA	3490725	3490354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3490400_3490700
WTC11_00057222	chr20	-	1083	5	NNC	ENSG00000101220.18	novel	1302	6	NA	NA	0	53401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	526.435181195178	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCACAGTGGCTCACA	-3734457	False	113	NA	False	NA	NA	NA	3758678	3700106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3700136_3753509_3754159_3754396_3754520_3755468_3755608_3758535
WTC11_00057223	chr20	-	1255	7	NNC	ENSG00000101220.18	novel	1302	6	NA	NA	0	53401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	446.941613139295	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCACAGTGGCTCACA	-3743507	True	NA	NA	False	NA	NA	NA	3767728	3700106	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3700137_3753509_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
WTC11_00057225	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	460.515189760338	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743507	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
WTC11_00057226	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_5	54.5615249053763	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743532	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
WTC11_00057227	chr20	-	1732	6	FSM	ENSG00000101220.18	ENST00000399672.5	1734	6	0	2	0	-2	multi-exon	FALSE	canonical	1	3	junction_5	484.126264521974	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCAGGTGGATTTTTGT	-3743560	True	NA	-6	True	AATAAA	-17	NA	3767781	3753509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767208
WTC11_00057228	chr20	-	1551	7	FSM	ENSG00000101222.12	ENST00000379756.3	1580	7	29	0	29	0	multi-exon	TRUE	canonical	1	1	junction_2	1.34370962471643	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGCCTGCCTTCTC	-3777425	False	3994	0	True	ATTAAA	-18	NA	3781419	3777503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3778320_3778420_3778545_3778745_3778807_3778950_3778991_3779195_3779353_3779663_3779776_3781178
WTC11_00057229	chr20	-	2900	1	FSM	ENSG00000125817.8	ENST00000379751.5	2890	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGGTCTGGGCTTGCGT	-3782746	True	NA	4	True	NA	NA	NA	3786740	3783840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3783800_3786700
WTC11_00057230	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	30.3063066410644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	-4014091	True	NA	3	True	NA	NA	NA	4015545	3933566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
WTC11_00057231	chr20	-	7330	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	-2	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.40212741883453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGCATATGCCTTTG	-4014104	True	NA	0	True	AATAAA	-19	NA	4015558	3927308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
WTC11_00057232	chr20	-	5460	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	-70	0	-70	0	multi-exon	FALSE	canonical	3	41	junction_11	6	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	-4823668	False	NA	-11	True	AATAAA	-17	NA	4823678	4780022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
WTC11_00057233	chr20	-	5425	4	ISM	ENSG00000089057.15	ENST00000338244.6	6953	17	138389	0	22870	0	3prime_fragment	FALSE	canonical	3	43	junction_3	9.8770215933527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCTTCACGTGCCT	NA	False	NA	-3	True	AATAAA	-17	NA	4863121	4852357	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777
WTC11_00057234	chr20	-	6950	17	FSM	ENSG00000089057.15	ENST00000338244.6	6953	17	5	-2	5	0	multi-exon	FALSE	canonical	3	27	junction_16	9.15640998153752	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTCACGTGCCTCC	-4999576	True	NA	-1	True	AATAAA	-19	NA	5001505	4852355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4883641_4883824_4884752_4884824_4885820_4885910_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970920_5001405
WTC11_00057236	chr20	-	1426	5	NNC	ENSG00000089063.15	novel	1735	5	NA	NA	0	1870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509.143643778453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTTAGATAAGATTC	-5101437	False	11605	NA	False	NA	NA	NA	5113042	5097969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_5097996_5099850_5100932_5106187_5106311_5109331_5109446_5112960
WTC11_00057237	chr20	-	1518	5	NNC	ENSG00000089063.15	novel	1541	5	NA	NA	-19	1870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509.143643778453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTTAGATAAGATTC	-5101517	False	NA	NA	False	NA	NA	NA	5113122	5097969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_5097996_5099838_5100932_5106187_5106311_5109331_5109446_5112960
WTC11_00057238	chr20	-	1421	7	NNC	ENSG00000132646.11	novel	1359	7	NA	NA	-123	16983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	440.84669166906	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTTAGATAAGATTC	-5120051	False	NA	NA	False	NA	NA	NA	5120081	5097969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_5097996_5114956_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
WTC11_00057240	chr20	-	1730	4	FSM	ENSG00000089063.15	ENST00000492419.1	1730	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	573.37674254271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101364	False	33	-10	True	AATAAA	-29	NA	5112969	5099839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109157_5109446_5112742
WTC11_00057241	chr20	-	1862	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	-55	-165	6	165	multi-exon	FALSE	canonical	3	144	junction_3	513.151266413932	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAGTTTTAGATGTCT	-5101492	False	11605	NA	False	NA	NA	NA	5113097	5099674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
WTC11_00057242	chr20	-	1828	4	FSM	ENSG00000089063.15	ENST00000379279.6	1636	4	-27	-165	0	165	multi-exon	FALSE	canonical	3	39	junction_3	562.646326646579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAGTTTTAGATGTCT	-5101471	False	11605	NA	False	NA	NA	NA	5113076	5099674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112742
WTC11_00057243	chr20	-	1660	4	FSM	ENSG00000089063.15	ENST00000379283.6	1660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	581.030310932418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101445	False	11605	-10	True	AATAAA	-29	NA	5113050	5099839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112719
WTC11_00057244	chr20	-	1551	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	-10	0	0	multi-exon	FALSE	canonical	3	13	junction_3	609.018267377917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101471	False	11605	-10	True	AATAAA	-29	NA	5113076	5099839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
WTC11_00057246	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_5	115.475711731948	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5108353	True	NA	-2	True	AATAAA	-23	NA	5119958	5114952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
WTC11_00057247	chr20	-	1355	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	4	0	4	0	multi-exon	FALSE	canonical	3	42	junction_6	425.664741577479	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5126317	True	NA	-2	True	AATAAA	-23	NA	5126622	5114952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
WTC11_00057248	chr20	-	548	1	FSM	ENSG00000225022.1	ENST00000436669.1	444	1	-44	-60	-44	60	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGATTTTCTTATCC	NA	False	NA	NA	False	AATAAA	-17	NA	5292875	5292327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5292300_5292900
WTC11_00057249	chr20	-	4533	3	FSM	ENSG00000101292.8	ENST00000678254.1	4446	3	-87	0	-87	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGGTTTCAAGTGCTT	NA	False	NA	NA	False	ATTAAA	-45	NA	5317041	5299217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5302737_5313911_5314378_5316493
WTC11_00057251	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	13.0770145770855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-5609767	True	NA	-11	True	AATAAA	-16	NA	5611006	5544438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
WTC11_00057252	chr20	-	819	8	FSM	ENSG00000125772.14	ENST00000481690.2	819	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	17.9102068721744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGAGTGGAAAGAGT	-5609685	True	NA	NA	False	NA	NA	NA	5610924	5575899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5593326_5593412_5598724_5598822_5604363_5604441_5610841
WTC11_00057253	chr20	-	3032	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	-7	0	0	multi-exon	FALSE	canonical	2	5	junction_6	93.0225779045066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-5946208	True	NA	NA	False	AATAAA	-14	NA	5950515	5937227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
WTC11_00057254	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_8	13.9298241194927	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-5946226	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
WTC11_00057256	chr20	-	2237	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	2	0	2	0	multi-exon	FALSE	canonical	1	5	junction_8	97.6194425079121	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946249	True	NA	-4	True	ATTAAA	-21	NA	5950556	5937832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
WTC11_00057257	chr20	-	4805	15	NNC	ENSG00000101311.16	novel	4637	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	8.21521733847421	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCCTGTTGTGTCCTC	-6123018	False	NA	-6	True	AGTAAA	-20	NA	6123030	6074843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119740_6122773
WTC11_00057258	chr20	-	4639	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	-2	0	2	multi-exon	TRUE	canonical	3	9	junction_14	8.77292914107288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCCTGTTGTGTCCTCT	-6123018	False	NA	-5	True	AGTAAA	-21	NA	6123030	6074842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
WTC11_00057259	chr20	-	6088	8	FSM	ENSG00000125827.9	ENST00000246024.7	6103	8	0	15	0	-15	multi-exon	FALSE	canonical	3	85	junction_7	5.03862631101383	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCCATCCTCCATCTAG	-8019102	True	NA	-14	True	NA	NA	NA	8019761	7977360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_7982622_7983793_7983858_7987287_7987390_7996025_7996072_7999731_7999861_8001495_8001542_8010199_8010316_8019437
WTC11_00057260	chr20	-	6373	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	341	0	271	multi-exon	FALSE	canonical	3	196	junction_3	553.010162655263	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATGGAAGTTTTTGCCA	-10420278	True	NA	NA	False	NA	NA	NA	10434222	10401349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
WTC11_00057261	chr20	-	2573	6	FSM	ENSG00000125863.20	ENST00000399054.6	2663	6	90	0	90	0	multi-exon	FALSE	canonical	0	0	junction_5	437.670835217518	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGTATTTGTTTTC	-10431806	False	NA	0	True	AATAAA	-26	NA	10431832	10405183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10431683
WTC11_00057262	chr20	-	378	1	FSM	ENSG00000235036.4	ENST00000456064.1	1369	1	379	612	379	-612	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAAAATCTGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	10613850	10613472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10613500_10613800
WTC11_00057263	chr20	-	5944	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	-4	0	4	multi-exon	FALSE	canonical	3	81	junction_12	14.6803814664334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCGAGGTGAATTGTTTG	-10672474	True	NA	1	True	AATAAA	-24	NA	10673999	10637679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
WTC11_00057264	chr20	-	741	4	FSM	ENSG00000101384.12	ENST00000488480.2	1161	4	0	420	0	-420	multi-exon	FALSE	canonical	3	103	junction_1	9.2736184954957	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCTCCCCCCTTG	-10646355	False	NA	NA	False	NA	NA	NA	10646366	10644862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10644980_10645142_10645257_10645355_10645470_10645970
WTC11_00057265	chr20	-	457	3	FSM	ENSG00000101384.12	ENST00000612857.1	586	3	129	0	129	0	multi-exon	FALSE	canonical	3	81	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTGCCACTCACGTAA	-10647172	False	NA	NA	False	NA	NA	NA	10647183	10645371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10645470_10645970_10646085_10646938
WTC11_00057267	chr20	-	997	2	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAAATGGGGGAATTGT	NA	False	NA	NA	False	NA	NA	NA	13362691	13360047	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_-_13360834_13362480
WTC11_00057268	chr20	-	2356	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	29	-43	0	41	multi-exon	FALSE	canonical	3	65	junction_8	9.62676249904493	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATCATACCATTATCCA	-13637123	True	NA	39	True	TATAAA	-11	NA	13638903	13389350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
WTC11_00057269	chr20	-	4366	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	-1178	0	1175	multi-exon	FALSE	canonical	3	295	junction_13	23.7763245575816	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATCAAAATAATAAGGGA	-13777554	True	NA	NA	False	ACTAAA	-20	NA	13784919	13713146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
WTC11_00057270	chr20	-	5191	26	FSM	ENSG00000089177.19	ENST00000354981.7	5276	26	85	0	70	0	multi-exon	TRUE	canonical	1	13	junction_24	8.50750257126026	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	-16571392	True	NA	-6	True	ATTAAA	-18	NA	16573363	16272103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
WTC11_00057272	chr20	-	2223	8	FSM	ENSG00000125864.14	ENST00000377873.8	2217	8	0	-6	0	6	multi-exon	FALSE	canonical	2	10	junction_7	3.64215679542342	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTAATTAATAGGGACC	-17531263	True	NA	5	True	ATTAAA	-25	NA	17531379	17493898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17495030_17496937_17497024_17498819_17499041_17508888_17508997_17511975_17512069_17514720_17514817_17524847_17524909_17530952
WTC11_00057273	chr20	-	2199	6	FSM	ENSG00000125844.17	ENST00000468428.1	2200	6	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.716280158421	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	-17619756	False	NA	-3	True	ATTAAA	-20	NA	17619817	17613678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595
WTC11_00057274	chr20	-	4971	24	NIC	ENSG00000125844.17	novel	5049	25	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	110.172094285115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGGTCTCGTCTGGTC	-17669923	True	NA	-4	True	ATTAAA	-19	NA	17682242	17613679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17682027
WTC11_00057275	chr20	-	5049	25	FSM	ENSG00000125844.17	ENST00000377813.6	5049	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.807927534387	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	-17669923	True	NA	-3	True	ATTAAA	-20	NA	17682242	17613678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17679998_17680076_17682027
WTC11_00057276	chr20	-	5015	24	NIC	ENSG00000125844.17	novel	3727	25	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	128.567974268717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGGTCTCGTCTGGTC	-17669976	True	NA	-4	True	ATTAAA	-19	NA	17682295	17613679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658604_17660529_17682027
WTC11_00057278	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	-17669976	True	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17660529_17682027
WTC11_00057279	chr20	-	3110	14	FSM	ENSG00000089006.17	ENST00000483485.5	3087	14	0	-23	0	23	multi-exon	FALSE	canonical	1	9	junction_8	378.842663006174	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGAGTGTGTCCCAGG	-17961961	False	NA	1	True	AATAAA	-43	NA	17961995	17941573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951020_17951328_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17961139
WTC11_00057280	chr20	-	2048	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	-23	0	23	multi-exon	FALSE	canonical	3	122	junction_12	235.928823423977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGAGTGTGTCCCAGG	-17950358	True	NA	1	True	AATAAA	-43	NA	17968800	17941573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
WTC11_00057281	chr20	-	2311	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	-23	0	23	multi-exon	FALSE	canonical	3	444	junction_13	152.050871275443	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGAGTGTGTCCCAGG	-17968946	False	NA	1	True	AATAAA	-43	NA	17968980	17941573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
WTC11_00057282	chr20	-	1321	2	FSM	ENSG00000089006.17	ENST00000484809.1	1321	2	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-17943577	False	NA	-25	True	AATAAA	-17	NA	17943622	17941599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109
WTC11_00057283	chr20	-	3931	1	FSM	ENSG00000089006.17	ENST00000606570.1	3931	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-17945483	False	NA	-25	True	AATAAA	-17	NA	17945530	17941599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17941600_17945500
WTC11_00057284	chr20	-	2341	13	FSM	ENSG00000089006.17	ENST00000377759.9	2341	13	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_12	89.0677020897898	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-17950352	True	NA	-25	True	AATAAA	-17	NA	17968794	17941599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374
WTC11_00057288	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	-17968740	False	NA	-10	True	AATAAA	-33	NA	17968774	17967687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17967700_17968800
WTC11_00057289	chr20	-	885	2	FSM	ENSG00000089006.17	ENST00000606602.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	-17950343	True	NA	-10	True	AATAAA	-33	NA	17968785	17967687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17968162_17968374
WTC11_00057291	chr20	-	1591	4	FSM	ENSG00000125850.11	ENST00000278780.7	1583	4	0	-8	0	8	multi-exon	FALSE	canonical	3	31	junction_3	21.853044537445	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTACAGCTCTCTGTTC	-18057547	True	NA	-13	True	AATAAA	-42	NA	18057916	18024154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18057534
WTC11_00057292	chr20	-	2374	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	-52	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	13.64994460261	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-18412781	True	NA	2	True	AATAAA	-21	NA	18413274	18383366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
WTC11_00057293	chr20	-	2931	17	FSM	ENSG00000089091.16	ENST00000357236.8	3739	17	812	-4	812	0	multi-exon	FALSE	non_canonical	0	0	junction_9	12.4823312626288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	2	True	AATAAA	-21	NA	18453827	18383366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730
WTC11_00057294	chr20	-	837	6	FSM	ENSG00000089091.16	ENST00000480488.2	837	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	13.6293800299207	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTAAGTGTCTTTTTTTG	-18412729	True	NA	NA	False	GATAAA	-44	NA	18413222	18393713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
WTC11_00057295	chr20	-	3836	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	7	0	-7	multi-exon	FALSE	canonical	3	68	junction_3	12.2678441463853	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCTTGAAGTTTCT	-18495837	True	NA	NA	False	ATTAAA	-13	NA	18497225	18486546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
WTC11_00057296	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	38.2186690854963	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	-18495786	True	NA	NA	False	NA	NA	NA	18497174	18489458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
WTC11_00057297	chr20	-	367	1	FSM	ENSG00000236992.2	ENST00000424633.1	501	1	16	118	16	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAAGAGATCCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	19823927	19823560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_19823600_19823900
WTC11_00057298	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	27.3225311795809	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-20047606	True	NA	-14	True	AGTAAA	-24	NA	20052466	20034367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
WTC11_00057299	chr20	-	8788	33	FSM	ENSG00000188559.16	ENST00000430436.5	8769	33	0	-19	0	-3	multi-exon	TRUE	canonical	2	2	junction_1	13.8456544965379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGAATTGTGTGAAAGC	-20639886	False	NA	-2	True	AATAAA	-44	NA	20639900	20389532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20393254_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784
WTC11_00057300	chr20	-	9542	40	FSM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	3	0	-3	multi-exon	TRUE	canonical	3	39	junction_31	10.1494421943933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGAATTGTGTGAAAGC	-20710986	True	NA	-2	True	AATAAA	-44	NA	20712644	20389532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20393254_20396694_20396735_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
WTC11_00057301	chr20	-	2599	6	FSM	ENSG00000188559.16	ENST00000427175.2	2623	6	0	24	0	-24	multi-exon	FALSE	canonical	3	52	junction_1	7.39188744503053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTGTTTAAAACAA	-20512590	False	NA	NA	False	NA	NA	NA	20512600	20470956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512
WTC11_00057302	chr20	-	1256	2	FSM	ENSG00000225127.4	ENST00000420705.2	1288	2	32	0	32	0	multi-exon	FALSE	canonical	3	9	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	21106482	21092808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21093853_21106270
WTC11_00057303	chr20	-	718	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	-200	-127	-200	127	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAATTGCTTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	21166796	21166078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21166100_21166800
WTC11_00057304	chr20	-	1625	1	FSM	ENSG00000275457.1	ENST00000622628.1	974	1	-654	3	-654	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATCTAGCCGGTAT	NA	False	NA	-1	True	AATAAA	-18	NA	21304358	21302733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21302700_21304400
WTC11_00057305	chr20	-	847	1	FSM	ENSG00000225170.2	ENST00000413920.2	1403	1	337	219	337	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAACACTCACCATATA	NA	False	NA	NA	False	CATAAA	-45	NA	22273117	22272270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_22272300_22273100
WTC11_00057306	chr20	-	2232	3	NNC	ENSG00000125798.15	novel	2401	3	NA	NA	434	-171	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTCTTCCAGATTTTT	-22584996	True	NA	-9	True	ATTAAA	-27	NA	22585021	22581175	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_22583155_22584191_22584262_22584838
WTC11_00057307	chr20	-	618	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	63	11	-4	-3	multi-exon	FALSE	canonical	2	11	junction_1	3.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTTCATCTGCCTTA	-23358032	True	NA	NA	False	AATAAA	-13	NA	23358112	23356596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23356970_23357050_23357138_23357954
WTC11_00057309	chr20	-	3839	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	74	-76	0	73	multi-exon	FALSE	canonical	3	23	junction_8	31.1738672608966	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCAAAAGTAGCTTCCA	-23419371	True	NA	74	True	NA	NA	NA	23421414	23374445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
WTC11_00057313	chr20	-	794	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	-1	0	1	multi-exon	FALSE	canonical	3	513	junction_2	14	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGAGTTCTTGGCTGT	-23636418	True	NA	-7	True	AATAAA	-16	NA	23637955	23633655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23634000_23635253_23635368_23637619
WTC11_00057314	chr20	-	751	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	-2	0	2	multi-exon	FALSE	canonical	3	22	junction_1	3	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGAGTTCTTGGCTGTC	-23750176	True	NA	2	True	ATTAAA	-16	NA	23750935	23747559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23747900_23749015_23749130_23750638
WTC11_00057315	chr20	-	2157	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	-40	0	40	multi-exon	FALSE	canonical	3	12	junction_2	271.779367670465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTACTGAAATTTAATT	-24983082	False	NA	39	True	NA	NA	NA	24992642	24962884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
WTC11_00057316	chr20	-	2242	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	-40	0	40	multi-exon	FALSE	canonical	3	582	junction_1	48.048803314963	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTACTGAAATTTAATT	-24983191	True	NA	39	True	NA	NA	NA	24992751	24962884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
WTC11_00057317	chr20	-	3635	14	FSM	ENSG00000154930.15	ENST00000323482.9	3632	14	0	-3	0	-2	multi-exon	FALSE	canonical	2	8	junction_6	4.38529009653515	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTGGTGATTTTTT	-25058002	True	NA	-2	True	AATAAA	-19	NA	25058139	25006233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25007942_25009269_25009389_25012600_25012665_25012811_25012940_25013535_25013663_25013960_25014074_25015137_25015231_25020009_25020148_25021388_25021537_25022939_25023093_25023465_25023642_25030758_25030959_25048084_25048182_25057768
WTC11_00057318	chr20	-	1579	13	FSM	ENSG00000100997.20	ENST00000376542.8	1577	13	0	-2	0	1	multi-exon	TRUE	canonical	1	72	junction_1	309.328843358219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTTGCAAGTGAAATCCAT	-25382138	True	NA	NA	False	AATAAA	-26	NA	25390835	25294740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25295031_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
WTC11_00057319	chr20	-	2108	13	FSM	ENSG00000100997.20	ENST00000339157.10	1960	13	0	-148	0	147	multi-exon	FALSE	canonical	1	278	junction_4	200.948583805244	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGTAGGAAGTTTTG	-25382138	True	NA	NA	False	NA	NA	NA	25390835	25300065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
WTC11_00057323	chr20	-	1504	1	FSM	ENSG00000227379.2	ENST00000414143.1	492	1	-101	-911	-101	911	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAATTCTCTGCCCCCC	NA	False	NA	NA	False	NA	NA	NA	25368867	25367363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25367400_25368900
WTC11_00057324	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_20	33.5399206318745	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	-25583701	True	NA	-5	True	AATAAA	-21	NA	25585531	25452696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
WTC11_00057325	chr20	-	1504	3	FSM	ENSG00000101004.15	ENST00000464285.5	1514	3	21	-11	21	0	multi-exon	FALSE	canonical	3	174	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	-25458920	False	NA	6	True	NA	NA	NA	25458955	25452825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25453643_25455672_25455787_25458382
WTC11_00057329	chr20	-	3795	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	8	0	-8	multi-exon	FALSE	canonical	3	103	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAAAGTCATTCTCCTC	-25622931	True	NA	NA	False	AATAAA	-10	NA	25624014	25612942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25616582_25623858
WTC11_00057330	chr20	-	3551	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	3	683	3	337	multi-exon	FALSE	canonical	3	20	junction_4	6.97764286847643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTTTGAAAATGTAGGGA	-25696165	True	NA	NA	False	NA	NA	NA	25696850	25673877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
WTC11_00057331	chr20	-	3613	4	FSM	ENSG00000130684.14	ENST00000376436.5	3613	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	1.88561808316413	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAGTCAGTGGTATTT	-25686272	False	NA	-6	True	AATAAA	-15	NA	25686957	25674214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390
WTC11_00057332	chr20	-	1168	11	NIC	ENSG00000282826.3	novel	1102	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	51.1489002814332	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTGTTGTGAAAT	-28600766	True	NA	-2	True	AATAAA	-28	NA	28602755	28580631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_28580745_28581918_28582030_28583018_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601602_28601757_28602608
WTC11_00057333	chr20	-	2195	8	NIC	ENSG00000282826.3	novel	1098	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_7	38.4590956838084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTGTTGTGAAAT	-28600850	True	NA	-2	True	AATAAA	-28	NA	28602839	28580631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
WTC11_00057334	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	59	junction_1	42.703739590345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	-28600675	False	NA	-33	True	AAAAAG	-37	NA	28602664	28580708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
WTC11_00057335	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	67	junction_1	43.8776708588776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600772	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
WTC11_00057336	chr20	-	813	1	FSM	ENSG00000224628.2	ENST00000445194.2	1519	1	711	-5	711	5	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGTGTTCTTGTCTGCC	NA	False	NA	NA	False	NA	NA	NA	31286124	31285311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31285300_31286100
WTC11_00057337	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721106	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654
WTC11_00057338	chr20	-	2582	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	-8	0	2	multi-exon	FALSE	canonical	3	103	junction_2	125	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTCTTGTGTGCTCCG	-31720068	True	NA	NA	False	AATAAA	-27	NA	31722868	31664449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31722617
WTC11_00057339	chr20	-	2498	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_1	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTCTTGTGTGCTCCG	-31721482	False	NA	NA	False	AATAAA	-27	NA	31722973	31664449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721843_31722349_31722617
WTC11_00057340	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	174.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721075	False	2800	NA	False	AATAAA	-14	NA	31722566	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31722443
WTC11_00057341	chr20	-	2450	3	NNC	ENSG00000171552.14	novel	2441	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721075	False	2800	NA	False	AATAAA	-14	NA	31722566	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_31666087_31721654_31722331_31722416
WTC11_00057342	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	102	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722038	False	1491	NA	False	AATAAA	-14	NA	31723529	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31722617
WTC11_00057343	chr20	-	2413	3	FSM	ENSG00000171552.14	ENST00000676942.1	2413	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	172.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722469	True	NA	NA	False	AATAAA	-14	NA	31723960	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31723847
WTC11_00057346	chr20	-	2420	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	6	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_2	155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723983	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31723863
WTC11_00057347	chr20	-	2438	3	FSM	ENSG00000171552.14	ENST00000420488.6	2444	3	6	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_2	171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723983	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31723863
WTC11_00057349	chr20	-	1208	1	FSM	ENSG00000179772.8	ENST00000375978.5	1302	1	94	0	94	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGCTTGCCTGATGGC	-31845497	False	NA	NA	False	AATAAA	-16	NA	31845510	31844302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31844300_31845500
WTC11_00057350	chr20	-	1234	7	FSM	ENSG00000149599.16	ENST00000339738.10	1224	7	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.24721912892465	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCCTCCCAGTCATTC	-31870405	True	NA	0	True	ATTAAA	-25	NA	31870527	31861066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870316
WTC11_00057351	chr20	-	1356	6	NNC	ENSG00000088356.6	novel	1957	5	NA	NA	0	35211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.452360531093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTTTCAACCGCTAAG	-31947811	True	NA	NA	False	NA	NA	NA	31952046	31909125	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_31909153_31944964_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
WTC11_00057352	chr20	-	1949	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	8	0	-8	multi-exon	FALSE	canonical	3	355	junction_2	24.8935232540514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTGCTAGATGTTGTC	-31947811	True	NA	-8	True	AATAAA	-18	NA	31952046	31944344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
WTC11_00057353	chr20	-	3919	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	-38	3	-38	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGATCATGTCACTT	-32189572	True	NA	-6	True	AATAAA	-24	NA	32190398	32186479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32186500_32190400
WTC11_00057354	chr20	-	5662	3	FSM	ENSG00000126003.7	ENST00000246229.5	5656	3	0	-6	0	6	multi-exon	FALSE	canonical	3	59	junction_2	10	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAACCTGTCTGATTGG	-32205711	True	NA	2	True	ATTAAA	-26	NA	32207743	32192497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32197683_32201918_32202293_32207640
WTC11_00057355	chr20	-	4371	1	ISM	ENSG00000197183.15	ENST00000359676.9	5991	8	36042	0	36042	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	-32447410	False	NA	NA	False	AATAAA	-20	NA	32447429	32443058	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_32443100_32447400
WTC11_00057356	chr20	-	6109	8	FSM	ENSG00000197183.15	ENST00000359676.9	5991	8	-118	0	-7	0	multi-exon	FALSE	canonical	1	4	junction_5	14.2728513519298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	-32481262	True	NA	NA	False	AATAAA	-20	NA	32483589	32443058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32447817_32452235_32452438_32452883_32453007_32453303_32453496_32453575_32453762_32456117_32456396_32474600_32474743_32483361
WTC11_00057357	chr20	-	702	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	-1	0	1	multi-exon	FALSE	canonical	3	47	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTTTCTTTATTAC	-32481255	True	NA	NA	False	AATAAA	-20	NA	32483582	32464778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32465118_32474600_32474743_32483361
WTC11_00057358	chr20	-	636	1	FSM	ENSG00000175730.8	ENST00000317045.6	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAAGGGTGCCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	32690815	32690179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32690200_32690800
WTC11_00057359	chr20	-	1347	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	-4	0	0	multi-exon	FALSE	canonical	3	98	junction_8	141.912329890676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGATCCAGTTGTCTT	-32740746	True	NA	-51	True	AATAAA	-17	NA	32743455	32702698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
WTC11_00057360	chr20	-	1362	9	FSM	ENSG00000149600.12	ENST00000278980.11	1362	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	26.6552058705237	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGATCCAGTTGTCTT	-32740758	True	NA	-51	True	AATAAA	-17	NA	32743467	32702698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
WTC11_00057361	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_9	41.6312354286251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394913	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
WTC11_00057363	chr20	-	2141	15	FSM	ENSG00000101391.21	ENST00000357886.8	2164	15	23	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_8	126.927345439855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394932	True	NA	-15	True	ATTAAA	-21	NA	33401538	33358838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33383479_33383522_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
WTC11_00057364	chr20	-	763	7	FSM	ENSG00000101391.21	ENST00000471264.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	153.113247848338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCTGGGGTTGGGGA	-33394846	True	NA	NA	False	NA	NA	NA	33401452	33370498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33401427
WTC11_00057365	chr20	-	740	2	FSM	ENSG00000101391.21	ENST00000473791.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAATCTGTCCCAAGGC	-33379564	True	NA	NA	False	NA	NA	NA	33379588	33373600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33374213_33379460
WTC11_00057367	chr20	-	3378	2	ISM	ENSG00000101400.6	ENST00000217381.3	2211	8	32319	9	32319	-9	intron_retention	FALSE	canonical	3	43	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGTGTATGTGGTCTG	NA	False	NA	-10	True	AATAAA	-26	NA	33411444	33407965	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_33408600_33408700
WTC11_00057368	chr20	-	2212	8	FSM	ENSG00000101400.6	ENST00000217381.3	2211	8	1	-2	1	2	multi-exon	FALSE	canonical	3	25	junction_3	6.79735843049733	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGCCTTGGCCT	-33443410	True	NA	1	True	AATAAA	-37	NA	33443762	33407954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33408600_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
WTC11_00057369	chr20	-	2557	8	NNC	ENSG00000101412.13	novel	2690	7	NA	NA	-42	75294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.243619399689	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCAAAAGTGATAATTC	-33682260	True	NA	NA	False	AAAACA	-45	NA	33686427	33600182	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_33600214_33675682_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
WTC11_00057370	chr20	-	1036	1	FSM	ENSG00000275223.1	ENST00000621597.1	723	1	-328	15	-328	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCCTCTGCCATCTTT	-33656663	False	NA	NA	False	ACTAAA	-3	NA	33656751	33655715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33655700_33656800
WTC11_00057371	chr20	-	1845	13	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	0	1	intron_retention	TRUE	canonical	2	7	junction_7	28.1961137984179	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTCCTGTCTCGCAG	-33673002	True	NA	-3	True	AATAAA	-19	NA	33674366	33657085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660035_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670761_33672397_33672423_33674223
WTC11_00057372	chr20	-	2010	12	FSM	ENSG00000125967.17	ENST00000246190.11	2009	12	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_10	17.1887912738082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTCCTGTCTCGCAG	-33673064	True	NA	-3	True	AATAAA	-19	NA	33674428	33657085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
WTC11_00057373	chr20	-	1939	13	FSM	ENSG00000125967.17	ENST00000375238.8	1942	13	4	-1	4	1	multi-exon	FALSE	canonical	3	48	junction_11	16.570346673769	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTCCTGTCTCGCAG	-33673095	True	NA	-3	True	AATAAA	-19	NA	33674459	33657085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
WTC11_00057374	chr20	-	859	9	FSM	ENSG00000125967.17	ENST00000494174.5	859	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	26.619717785882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGCAAAGACCAGGACTT	-33669401	False	NA	NA	False	NA	NA	NA	33669428	33657756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660035_33660258_33660396_33669374
WTC11_00057375	chr20	-	732	8	FSM	ENSG00000125967.17	ENST00000480994.5	732	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	28.6548781329868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGTGTTCTTCCCAG	-33665295	False	NA	NA	False	NA	NA	NA	33666659	33657961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33666580
WTC11_00057381	chr20	-	2701	7	FSM	ENSG00000101412.13	ENST00000343380.6	2690	7	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_3	93.9053897400049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGCCCGAAGTGCAGA	-33682218	True	NA	NA	False	AGTAAA	-34	NA	33686385	33675465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
WTC11_00057382	chr20	-	5589	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	23	78	23	-78	multi-exon	FALSE	canonical	3	19	junction_2	5.71547606649408	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTACTAAACACCTGC	-33719566	True	NA	NA	False	AATAGA	-12	NA	33720287	33702835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
WTC11_00057383	chr20	-	1984	2	FSM	ENSG00000285230.3	ENST00000668968.2	2537	2	52	501	-1	-501	multi-exon	FALSE	canonical	3	12	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCTCTACAAAAAAAAAAA	-33992591	True	NA	NA	False	NA	NA	NA	33993135	33990997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33992906_33993059
WTC11_00057384	chr20	-	660	3	FSM	ENSG00000285230.3	ENST00000440595.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATTTATTTGTCT	-33994332	False	NA	-2	True	NA	NA	NA	33994355	33992487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33992906_33993059_33993151_33994204
WTC11_00057385	chr20	-	2559	11	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1712.13200425668	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053414_34088311_34089222_34089247_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057386	chr20	-	2562	11	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1712.13200425668	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053417_34088311_34089222_34089247_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057387	chr20	-	1468	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053416_34089430_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057388	chr20	-	1467	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053416_34089431_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057389	chr20	-	1456	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053413_34089439_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057390	chr20	-	1466	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053414_34089430_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057391	chr20	-	1457	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093087	True	NA	NA	False	NA	NA	NA	34112243	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053414_34089439_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057393	chr20	-	2599	11	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	-38	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1997.17090155049	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093125	True	NA	NA	False	NA	NA	NA	34112281	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053417_34088311_34089222_34089247_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103567_34105369_34105546_34112095
WTC11_00057394	chr20	-	2544	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	-38	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2166.4830691443	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093125	True	NA	NA	False	NA	NA	NA	34112281	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053417_34088311_34089222_34089247_34089906_34090516_34090603_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103568_34105368_34105546_34112095
WTC11_00057395	chr20	-	1495	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	-38	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1402.10635196558	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-34093125	True	NA	NA	False	NA	NA	NA	34112281	34053381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053417_34089442_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
WTC11_00057398	chr20	-	2423	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	0	4847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	518.118413106502	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCATGCCTGTAATCC	-34257887	True	NA	NA	False	AAGAAA	-18	NA	34303355	34275420	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34275694_34280267_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
WTC11_00057399	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_6	129.394697164609	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257887	True	NA	-20	True	AATAAA	-18	NA	34303355	34280267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
WTC11_00057400	chr20	-	1774	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	257	junction_1	443.589855609887	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257887	True	NA	-20	True	AATAAA	-18	NA	34303355	34280267	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
WTC11_00057401	chr20	-	2213	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	-2	0	0	multi-exon	FALSE	canonical	3	1449	junction_5	135.252945901374	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257849	True	NA	-20	True	AATAAA	-18	NA	34303317	34280267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
WTC11_00057402	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	8.09448337801893	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	-34674806	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
WTC11_00057403	chr20	-	7065	15	FSM	ENSG00000198646.14	ENST00000359003.7	7083	15	0	18	0	-17	multi-exon	FALSE	canonical	3	18	junction_14	7.31541564932909	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATTGGTAAGGGATT	-34825053	True	NA	-18	True	AATAAA	-25	NA	34825651	34714791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362_34743342_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
WTC11_00057404	chr20	-	4065	14	FSM	ENSG00000198646.14	ENST00000612493.4	4082	14	0	17	0	-17	multi-exon	FALSE	canonical	2	4	junction_4	9.86716508149945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATTGGTAAGGGATT	-34825032	True	NA	-18	True	AATAAA	-25	NA	34825630	34714791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
WTC11_00057405	chr20	-	2634	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	9	-5	9	5	multi-exon	FALSE	canonical	3	75	junction_2	11.8599394292427	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGTTTAATTTATATT	-34869271	True	NA	-1	True	ATTAAA	-23	NA	34872847	34844714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
WTC11_00057407	chr20	-	1908	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	1	0	0	multi-exon	FALSE	canonical	3	156	junction_1	29.1074398660472	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-34950994	True	NA	-6	True	AATAAA	-18	NA	34955806	34928432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
WTC11_00057408	chr20	-	870	6	FSM	ENSG00000100983.12	ENST00000645328.1	870	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	92.6964940005823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCAGCCCCTCATCAG	NA	False	NA	NA	False	NA	NA	NA	34937009	34928570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34928952_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942
WTC11_00057410	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_11	103.962540737244	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
WTC11_00057411	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	135.80797309273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
WTC11_00057412	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	20.5817880661521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145644	True	NA	0	True	AATAAA	-19	NA	35147336	35115363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
WTC11_00057413	chr20	-	1386	8	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	60.8685435330659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	-35145628	True	NA	-2	True	AATAAA	-17	NA	35147320	35115365	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35142372_35142479_35144978_35145019_35146824_35146936_35147151
WTC11_00057414	chr20	-	987	7	NNC	ENSG00000088298.13	novel	1756	10	NA	NA	29	-18864	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.4997812769636	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATTCAACTTTGTTTA	-35145598	False	NA	NA	False	AATAAA	-17	NA	35147290	35134227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_35134481_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
WTC11_00057415	chr20	-	264	1	FSM	ENSG00000278367.1	ENST00000615962.1	565	1	517	-216	517	216	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATTATAACCTGGGCA	-35174347	False	NA	NA	False	NA	NA	NA	35174402	35174138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35174100_35174400
WTC11_00057416	chr20	-	1088	8	NNC	ENSG00000242372.9	novel	1069	7	NA	NA	0	57113	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	452.24447064004	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTGGGAGTTGTGGCA	-35275652	True	NA	NA	False	NA	NA	NA	35284770	35221793	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_35221819_35278921_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
WTC11_00057417	chr20	-	1552	3	NIC	ENSG00000126005.17	novel	1499	3	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	29	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTACAAACCTATGAA	-35268991	False	9118	-15	True	AATAAA	-20	NA	35278109	35276352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35277298_35277389_35277933_35278045
WTC11_00057418	chr20	-	867	2	FSM	ENSG00000126005.17	ENST00000424358.1	867	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGGAGGCTATCTGA	-35269011	False	9118	NA	False	NA	NA	NA	35278129	35277149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35277933_35278045
WTC11_00057420	chr20	-	802	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_3	653.467843296227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275405	False	539	-6	True	ATTAAA	-32	NA	35284523	35278906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
WTC11_00057421	chr20	-	1256	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	-4	0	0	multi-exon	FALSE	canonical	3	1123	junction_3	127.673646458461	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275597	False	NA	-6	True	ATTAAA	-32	NA	35284715	35278906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
WTC11_00057422	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	482.303068619722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275599	False	NA	-6	True	ATTAAA	-32	NA	35284717	35278906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
WTC11_00057423	chr20	-	1021	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	-4	0	0	multi-exon	FALSE	canonical	3	212	junction_3	488.68055772662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275652	True	NA	-6	True	ATTAAA	-32	NA	35284770	35278906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
WTC11_00057424	chr20	-	936	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	-4	0	0	multi-exon	FALSE	canonical	3	212	junction_3	442.209633544996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	NA	False	NA	-6	True	ATTAAA	-32	NA	35284804	35278906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
WTC11_00057425	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_6	161.195533436879	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	-35275654	True	NA	-17	True	ATTAAA	-21	NA	35284772	35278917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
WTC11_00057428	chr20	-	2302	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	4	-39	0	27	multi-exon	TRUE	canonical	3	261	junction_9	23.4662878757307	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTCCCAACTCTACACA	-35410674	True	NA	29	True	NA	NA	NA	35411969	35302538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
WTC11_00057429	chr20	-	2120	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	2	11	2	1	multi-exon	FALSE	canonical	3	10	junction_6	108.228405490897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCTGGAATGGATGGAA	-35410734	True	NA	-9	True	AATAAA	-21	NA	35412029	35302576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
WTC11_00057430	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	98.0254271860113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	-35410678	True	NA	NA	False	NA	NA	NA	35411973	35303990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
WTC11_00057431	chr20	-	471	3	FSM	ENSG00000101019.22	ENST00000497717.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGAGTAGTCTCCTGCCC	-35347208	True	NA	NA	False	NA	NA	NA	35347226	35306449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35306780_35314687_35314766_35347163
WTC11_00057433	chr20	-	3640	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	-2	0	2	multi-exon	FALSE	canonical	3	261	junction_6	26.6207938774685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAATTCTTTTTTAAG	-35410679	True	NA	3	True	AATAAA	-36	NA	35411974	35344107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
WTC11_00057436	chr20	-	453	6	FSM	ENSG00000088340.17	ENST00000440443.1	453	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	5.49909083394701	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAAAGGTGAGTCTCCA	NA	False	NA	NA	False	NA	NA	NA	35579261	35576175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35576284_35576380_35576519_35576595_35576697_35576785_35576829_35579055_35579115_35579257
WTC11_00057437	chr20	-	6667	4	NNC	ENSG00000244462.8	novel	6646	3	NA	NA	2	53991	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	255.33812005957	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGATGGGGTCTTGCTGT	-35641348	True	NA	NA	False	NA	NA	NA	35664932	35594933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_35594959_35648960_35655345_35658929_35659015_35664759
WTC11_00057439	chr20	-	821	2	FSM	ENSG00000214078.13	ENST00000473373.1	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35627319	False	NA	-15	True	AATAAA	-17	NA	35627340	35626043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626804_35627279
WTC11_00057441	chr20	-	2147	18	FSM	ENSG00000214078.13	ENST00000352393.8	2147	18	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_15	232.914139845121	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	-35641302	True	NA	-2	True	AATAAA	-30	NA	35664886	35626030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35655201_35655345_35658929_35658983_35664759
WTC11_00057442	chr20	-	1898	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	331	junction_15	127.971594070281	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641304	True	NA	-15	True	AATAAA	-17	NA	35664888	35626043	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
WTC11_00057443	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_15	126.405625753849	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641316	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
WTC11_00057444	chr20	-	1846	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	48	junction_15	193.875974100282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGCTTTGCCACCACTCT	-35641332	True	NA	-18	True	AATAAA	-14	NA	35664916	35626046	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664878
WTC11_00057456	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_2	68.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	-35641316	True	NA	7	True	AATAAA	-32	NA	35664900	35648924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35655345_35658929_35659015_35664759
WTC11_00057458	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	-35641316	True	NA	-6	True	ATTAAA	-17	NA	35664900	35650325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35655345_35658929_35658983_35664759
WTC11_00057462	chr20	-	4137	5	FSM	ENSG00000244005.13	ENST00000480655.5	2653	5	-579	-905	-579	-7	multi-exon	TRUE	canonical	3	160	junction_1	2.9474565306379	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCTAATTTGGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	35676765	35668058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511
WTC11_00057463	chr20	-	3000	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	8	0	-8	multi-exon	FALSE	canonical	3	109	junction_9	21.0480600847996	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTATGCTAATTTGGC	-35697752	True	NA	NA	False	ATTAAA	-11	NA	35699352	35668059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
WTC11_00057464	chr20	-	961	2	FSM	ENSG00000244005.13	ENST00000471137.1	961	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACTGAGGGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	35674798	35673757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35674432_35674511
WTC11_00057465	chr20	-	5060	17	FSM	ENSG00000131051.24	ENST00000253363.11	5060	17	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	248.116120747927	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCAACCTGGGCGAC	-35711515	True	NA	NA	False	NA	NA	NA	35742260	35701346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
WTC11_00057466	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	478.702245144278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	-35711521	True	NA	NA	False	ATTAAA	-10	NA	35742266	35703223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
WTC11_00057469	chr20	-	2794	18	FSM	ENSG00000131051.24	ENST00000338163.10	2792	18	0	-2	0	0	multi-exon	FALSE	canonical	2	26	junction_4	514.080568053128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	-35711476	True	NA	-4	True	AATAAA	-19	NA	35742221	35703608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35707939_35707993_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
WTC11_00057470	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	243.825803027945	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	-35711491	True	NA	-4	True	AATAAA	-19	NA	35742236	35703608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
WTC11_00057471	chr20	-	2885	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	-2	0	0	multi-exon	FALSE	canonical	3	429	junction_15	386.861875514561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	-35711529	True	NA	-4	True	AATAAA	-19	NA	35742274	35703608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
WTC11_00057472	chr20	-	2832	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	-1	0	0	multi-exon	FALSE	canonical	3	695	junction_5	267.319148853482	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	-35711567	False	NA	-4	True	AATAAA	-19	NA	35742312	35703608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
WTC11_00057473	chr20	-	2421	16	FSM	ENSG00000131051.24	ENST00000528062.7	2421	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	424.297673285579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCTTAAAATTCCAAA	-35711493	True	NA	NA	False	NA	NA	NA	35742238	35703897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35731940_35732136_35738967_35739018_35740823_35740888_35741940
WTC11_00057474	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	397.070736204739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711503	True	NA	-14	True	AATAAA	-15	NA	35742248	35704325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
WTC11_00057490	chr20	-	1068	5	FSM	ENSG00000131051.24	ENST00000453310.5	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	607.513528655947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTTACTTTTTACCTT	-35711513	True	NA	NA	False	NA	NA	NA	35742258	35734518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35735082_35738967_35739018_35740524_35740598_35740823_35740888_35741940
WTC11_00057493	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	681.811313096715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	-35711482	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
WTC11_00057495	chr20	-	773	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	-2	0	2	multi-exon	FALSE	canonical	3	592	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGTGTGTCTCTTTC	-35945125	True	NA	-3	True	AATGAA	-23	NA	35954502	35953621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35954340_35954447
WTC11_00057496	chr20	-	5349	1	FSM	ENSG00000260032.2	ENST00000565493.2	5401	1	57	-5	57	5	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGCTTGTAGAATAGAGT	-36014242	True	NA	-1	True	AATAAA	-30	NA	36050961	36045612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36045600_36051000
WTC11_00057497	chr20	-	443	4	ISM	ENSG00000232907.9	ENST00000425233.6	1810	7	403	17796	173	-12892	5prime_fragment	FALSE	canonical	3	12	junction_1	11.0855260988773	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAAGGTCACAGAATC	-36572971	False	NA	NA	False	NA	NA	NA	36572984	36525500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_36525567_36527723_36527925_36571440_36571544_36572911
WTC11_00057498	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	39.2311959375938	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-36744355	True	NA	-1	True	AATAAA	-27	NA	36746067	36651765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
WTC11_00057499	chr20	-	2976	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	-5	0	0	multi-exon	FALSE	canonical	3	123	junction_13	17.20258378526	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-36744378	True	NA	-1	True	AATAAA	-27	NA	36746090	36651765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
WTC11_00057500	chr20	-	2436	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	5	0	-1	multi-exon	FALSE	canonical	3	31	junction_10	71.4401147815427	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36770030	True	NA	-4	True	ATTAAA	-18	NA	36773751	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
WTC11_00057501	chr20	-	1921	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_9	75.9447167352674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36769999	True	NA	-4	True	ATTAAA	-18	NA	36773720	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
WTC11_00057502	chr20	-	2128	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	1	0	-1	multi-exon	FALSE	canonical	3	34	junction_9	73.7278947830182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36770039	True	NA	-4	True	ATTAAA	-18	NA	36773760	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
WTC11_00057503	chr20	-	2215	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	-35	1	0	-1	multi-exon	FALSE	canonical	3	198	junction_9	30.4934419178944	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36770077	True	NA	-4	True	ATTAAA	-18	NA	36773798	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
WTC11_00057504	chr20	-	2446	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	1	0	-1	multi-exon	FALSE	canonical	3	210	junction_6	27.4702982137183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36770077	True	NA	-4	True	ATTAAA	-18	NA	36773798	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
WTC11_00057505	chr20	-	1914	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_8	73.4193098696004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	-36770097	True	NA	-4	True	ATTAAA	-18	NA	36773818	36751795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
WTC11_00057507	chr20	-	14231	15	FSM	ENSG00000149639.15	ENST00000237536.9	14218	15	0	-13	0	13	multi-exon	FALSE	canonical	2	15	junction_11	4.67788980858084	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCCTCTCTGATTT	-36863319	False	NA	1	True	AATAAA	-28	NA	36863538	36777433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36786638_36793248_36794600_36796881_36796953_36797501_36797574_36802855_36803108_36804734_36804903_36805852_36805958_36808512_36808744_36809981_36810108_36812703_36812845_36815125_36816308_36817406_36817470_36829053_36829213_36839216_36839442_36862657
WTC11_00057509	chr20	-	4619	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	30	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	22.338208423138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	-36947684	True	NA	-28	True	AATAAA	-15	NA	36951678	36890228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
WTC11_00057516	chr20	-	5681	22	FSM	ENSG00000080839.12	ENST00000373664.8	5686	22	0	5	0	-5	multi-exon	FALSE	canonical	3	23	junction_11	8.1627437475109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCTTTTCTGTATGA	-37093922	True	NA	-24	True	AATAAA	-24	NA	37095997	36996353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36998930_37003701_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
WTC11_00057517	chr20	-	3251	21	FSM	ENSG00000080839.12	ENST00000344359.7	3225	21	-57	31	-49	-31	multi-exon	FALSE	canonical	3	23	junction_10	8.34925146345467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAATAAAATATGAAA	-37096010	False	NA	NA	False	NA	NA	NA	37096046	37003604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
WTC11_00057518	chr20	-	4322	1	FSM	ENSG00000166619.15	ENST00000613961.1	4083	1	-254	15	-254	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATACAGTCAAATCGAT	-37504218	False	NA	NA	False	NA	NA	NA	37504229	37499907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37499900_37504200
WTC11_00057519	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-37518956	True	NA	-12	True	AATAAA	-16	NA	37527876	37517416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37527792
WTC11_00057520	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37521318_37521410_37527792
WTC11_00057521	chr20	-	357	1	FSM	ENSG00000276603.1	ENST00000620327.1	419	1	72	-10	72	10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTTTTTTTGTTGTTG	-37518068	False	NA	NA	False	NA	NA	NA	37526988	37526631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37526600_37527000
WTC11_00057522	chr20	-	3826	9	NNC	ENSG00000101407.13	novel	3799	8	NA	NA	0	20478	intron_retention	FALSE	non_canonical	0	0	junction_1	140.87139525113	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCACCAAAAGAAAACAG	-38027963	True	NA	NA	False	NA	NA	NA	38033456	37962528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_37962554_37983018_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
WTC11_00057523	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	180.137274043991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-38027968	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
WTC11_00057526	chr20	-	5630	2	FSM	ENSG00000235408.6_ENSG00000196756.14	ENST00000667282.1	2292	2	-2542	-796	-172	17	multi-exon	FALSE	canonical	3	237	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCAGCCTGGGTGCC	-38421292	False	NA	NA	False	NA	NA	NA	38425526	38419791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005
WTC11_00057527	chr20	-	1972	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	29	-958	0	10	multi-exon	FALSE	canonical	3	114	junction_5	43.9344966967871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCACTTGAAGTTAAAAC	-38431118	True	NA	NA	False	NA	NA	NA	38435352	38419627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
WTC11_00057528	chr20	-	1950	7	FSM	ENSG00000196756.14	ENST00000666268.2	1191	7	37	-796	0	17	multi-exon	FALSE	canonical	3	41	junction_2	68.6935626937165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCAGCCTGGGTGCC	-38431110	True	NA	NA	False	NA	NA	NA	38435344	38419791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
WTC11_00057532	chr20	-	1595	4	FSM	ENSG00000196756.14	ENST00000659186.1	1582	4	0	-13	0	0	multi-exon	FALSE	canonical	3	41	junction_2	89.7007370216222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAACCTGTGAGCC	-38423210	False	NA	-5	True	AATAAA	-32	NA	38427444	38420574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418
WTC11_00057534	chr20	-	1249	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	-19	0	0	multi-exon	FALSE	canonical	2	8	junction_5	82.1596256176515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAACCTGTGAGCC	-38431100	True	NA	-5	True	AATAAA	-32	NA	38435334	38420574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
WTC11_00057535	chr20	-	1244	8	FSM	ENSG00000196756.14	ENST00000669033.1	1227	8	0	-17	0	0	multi-exon	FALSE	canonical	2	8	junction_5	81.0510043498688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAACCTGTGAGCC	-38431100	True	NA	-5	True	AATAAA	-32	NA	38435334	38420574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
WTC11_00057536	chr20	-	1550	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	39	-715	0	-63	multi-exon	FALSE	canonical	3	79	junction_5	52.8454349967904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTACTCAGGAGGCTGA	-38431110	True	NA	NA	False	NA	NA	NA	38435344	38419871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
WTC11_00057537	chr20	-	1205	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	-13	0	0	multi-exon	FALSE	canonical	3	30	junction_2	71.0656973042081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAACCTGTGAGCC	-38431143	True	NA	-5	True	AATAAA	-32	NA	38435377	38420574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
WTC11_00057538	chr20	-	1629	7	FSM	ENSG00000196756.14	ENST00000663540.2	1022	7	108	-715	0	-63	multi-exon	FALSE	canonical	3	41	junction_2	70.9835661732113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTACTCAGGAGGCTGA	-38431039	True	NA	NA	False	NA	NA	NA	38435273	38419871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
WTC11_00057539	chr20	-	272	1	FSM	ENSG00000235408.6	ENST00000439232.2	272	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAGGAAACAGGGTTT	-38421120	False	NA	NA	False	NA	NA	NA	38425354	38425082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38425100_38425400
WTC11_00057541	chr20	-	360	1	FSM	ENSG00000200354.1	ENST00000363484.1	134	1	126	-352	126	352	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTCGCACCTCAGCCT	-38429638	False	NA	NA	False	NA	NA	NA	38433872	38433512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38433500_38433900
WTC11_00057542	chr20	-	221	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	-39	5	-39	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTCAACTTGTCGAC	-38961984	True	NA	-9	True	ATTAAA	-21	NA	38962150	38961929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38961900_38962200
WTC11_00057543	chr20	-	1579	1	FSM	ENSG00000223864.1	ENST00000450070.1	712	1	-670	-197	-670	197	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACATGGAAATGGTGGG	NA	False	NA	NA	False	NA	NA	NA	38979092	38977513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38977500_38979100
WTC11_00057544	chr20	-	589	2	Antisense	novelGene_ENSG00000223410.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTAGAGGTTTCTTGCC	-40270848	False	NA	NA	False	NA	NA	NA	40270873	40094250	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr20_-_40094310_40270343
WTC11_00057545	chr20	-	3389	1	FSM	ENSG00000204103.4	ENST00000373313.3	3389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTCGCATGATTTT	-40689033	True	NA	6	True	ATTAAA	-29	NA	40689236	40685847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_40685800_40689200
WTC11_00057546	chr20	-	3791	4	FSM	ENSG00000183798.5	ENST00000332312.4	3791	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	3.55902608401044	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTTTCTTCAAAGACAG	-41366433	True	NA	-3	True	ATTAAA	-19	NA	41366818	41359961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41363055_41363637_41363862_41365034_41365158_41366467
WTC11_00057547	chr20	-	4154	3	FSM	ENSG00000124177.16	ENST00000480022.1	2829	3	1099	-2424	1099	-16	multi-exon	FALSE	canonical	3	83	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTAAAAGTCACATT	-41413946	False	NA	NA	False	AATAAA	-35	NA	41413966	41402098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41405490_41412143_41412264_41413323
WTC11_00057548	chr20	-	10760	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	-57	16	-50	-16	multi-exon	FALSE	canonical	3	33	junction_27	15.3702002444846	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTAAAAGTCACATT	-41613580	True	NA	NA	False	AATAAA	-35	NA	41618434	41402098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
WTC11_00057549	chr20	-	1336	6	FSM	ENSG00000124177.16	ENST00000470470.1	1349	6	0	13	0	-13	multi-exon	FALSE	canonical	3	50	junction_1	7.41350119714026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTACACAGCCCTTT	-41533254	False	NA	-16	True	AATAAA	-16	NA	41533285	41496821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049
WTC11_00057550	chr20	-	236	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	39	313	39	-313	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGTATTCATTAAGGC	-43590514	True	NA	NA	False	AAAAAG	-30	NA	43590557	43590321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_43590300_43590600
WTC11_00057551	chr20	-	2113	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	-4	0	4	multi-exon	FALSE	canonical	3	370	junction_1	30.4667396060396	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGTGGTTGATTCAT	-44205565	True	NA	NA	False	AATACA	-24	NA	44210771	44195934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
WTC11_00057552	chr20	-	4616	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	12	0	12	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-44310547	True	NA	NA	False	ATTAAA	-25	NA	44311190	44302839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44307241_44310975
WTC11_00057553	chr20	-	363	2	Genic_Genomic	ENSG00000226243.1	novel	279	1	NA	NA	0	81504	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACAGAGTTCAGCTGAA	-44466827	False	NA	NA	False	NA	NA	NA	44466842	44385059	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_44385090_44466509
WTC11_00057554	chr20	-	279	1	FSM	ENSG00000226243.1	ENST00000412502.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCTCTACTCTTTGAG	-44466827	False	NA	NA	False	NA	NA	NA	44466842	44466563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44466600_44466800
WTC11_00057555	chr20	-	1803	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	-16	-61	-16	58	multi-exon	FALSE	canonical	3	17	junction_1	114.657926023455	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAAGTTCGTGACTTG	-44517693	True	NA	54	True	NA	NA	NA	44522101	44496162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
WTC11_00057556	chr20	-	4402	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	-6	0	6	multi-exon	FALSE	canonical	3	330	junction_7	34.5728788303387	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATATTAATTTGAAGTAA	-44517662	True	NA	-5	True	AATAAA	-28	NA	44522070	44497434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
WTC11_00057557	chr20	-	1651	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	-155	0	-155	0	multi-exon	TRUE	canonical	3	227	junction_3	22.6208417027051	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	44651854	44619521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
WTC11_00057559	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	77.1748663750058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
WTC11_00057562	chr20	-	5455	6	FSM	ENSG00000101098.13	ENST00000372851.8	5411	6	-43	-1	-43	1	multi-exon	FALSE	canonical	3	48	junction_5	9.3680307429043	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCGTTCATGCTTTGT	NA	False	NA	-10	True	ATTAAA	-19	NA	44810589	44751806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44756353_44756897_44757038_44757669_44757772_44758071_44758185_44771274_44771414_44810174
WTC11_00057563	chr20	-	5458	6	FSM	ENSG00000101098.13	ENST00000541604.2	1036	6	-318	-4104	-43	1	multi-exon	FALSE	canonical	3	16	junction_5	20.8173004974228	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCGTTCATGCTTTGT	NA	False	NA	-10	True	ATTAAA	-19	NA	44810589	44751806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44756353_44756897_44757038_44757669_44757772_44758071_44758185_44771274_44771417_44810174
WTC11_00057564	chr20	-	1989	8	NNC	ENSG00000025772.8	novel	1973	7	NA	NA	0	62966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.705288715488	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGAGAGGGTGATTAC	-44957400	True	NA	NA	False	NA	NA	NA	44960397	44879163	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_44879183_44942132_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
WTC11_00057565	chr20	-	2992	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	-1019	0	1019	multi-exon	FALSE	canonical	3	375	junction_3	27.3231688417642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTCTAGGAGAGGG	-44957400	True	NA	NA	False	AATAAA	-19	NA	44960397	44941110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
WTC11_00057566	chr20	-	2635	6	NNC	ENSG00000124145.6	novel	2613	5	NA	NA	0	46542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.5540077925061	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATAGCACCCCCACCCC	-45345608	True	NA	NA	False	NA	NA	NA	45348424	45278745	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_45278772_45325291_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
WTC11_00057567	chr20	-	2618	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	-5	0	5	multi-exon	FALSE	canonical	3	165	junction_2	5.1720402163943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCATTTTCGTTC	-45345608	True	NA	1	True	AATAAA	-23	NA	45348424	45325282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
WTC11_00057569	chr20	-	963	2	Genic_Genomic	ENSG00000235508.3	novel	885	1	NA	NA	0	5656	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTGCATGCCTGTAGT	-45640947	False	NA	NA	False	AAAAAG	-8	NA	45641370	45634829	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_45634876_45640453
WTC11_00057570	chr20	-	965	2	Genic_Genomic	ENSG00000235508.3	novel	885	1	NA	NA	0	5656	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTGCATGCCTGTAGT	-45640947	False	NA	NA	False	AAAAAG	-8	NA	45641370	45634829	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_45634875_45640450
WTC11_00057574	chr20	-	626	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2863	-1	2863	1	intron_retention	FALSE	canonical	3	180	junction_1	0	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGGCCTGAATGAGGGGA	-45824427	False	NA	0	True	AATAAA	-18	NA	45824449	45823212	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_45823380_45823990
WTC11_00057575	chr20	-	1208	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	-11	0	6	multi-exon	FALSE	canonical	3	16	junction_2	145.099414195923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTAATTCCCCTGGGC	-45850143	True	NA	5	True	AATAAA	-25	NA	45857389	45841714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
WTC11_00057576	chr20	-	1160	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	-6	0	6	multi-exon	FALSE	canonical	3	328	junction_2	29.7684396635094	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTAATTCCCCTGGGC	-45850146	True	NA	5	True	AATAAA	-25	NA	45857392	45841714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
WTC11_00057577	chr20	-	1036	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	-23	0	6	multi-exon	FALSE	canonical	3	36	junction_4	139.811256699881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTAATTCCCCTGGGC	-45850156	True	NA	5	True	AATAAA	-25	NA	45857402	45841714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
WTC11_00057579	chr20	-	3059	2	FSM	ENSG00000101473.17	ENST00000484975.5	3059	2	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTATT	-45841864	False	NA	NA	False	NA	NA	NA	45849110	45842022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45844421_45848449
WTC11_00057582	chr20	-	818	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	-4	0	2	multi-exon	FALSE	canonical	3	7	junction_1	203.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTGTGCATTATCTTG	-45850063	False	NA	1	True	ATTAAA	-20	NA	45857309	45853417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45853980_45855158_45855293_45857187
WTC11_00057583	chr20	-	740	2	FSM	ENSG00000149634.5	ENST00000372519.4	742	2	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGGTTTCTCCGTATG	-45887340	False	NA	NA	False	NA	NA	NA	45887622	45886492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45887146_45887535
WTC11_00057584	chr20	-	1208	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	-9	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTTGCCCCTACAGC	-45890926	True	NA	-15	True	AATAAA	-31	NA	45891208	45888624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45888874_45890249
WTC11_00057585	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	127.896962966658	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	-45898183	True	NA	-64	True	NA	NA	NA	45912155	45898805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
WTC11_00057586	chr20	-	2110	15	FSM	ENSG00000100979.15	ENST00000477313.5	2255	15	-105	250	0	-207	multi-exon	FALSE	canonical	3	395	junction_12	45.1880424855234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGAGAAGAACCGGCC	-45898180	True	NA	NA	False	GGGGCT	-31	NA	45912152	45899012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352
WTC11_00057587	chr20	-	1560	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	329	0	-145	multi-exon	FALSE	canonical	3	395	junction_12	44.9287831524019	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTGAGCCCTCAATC	-45898183	True	NA	NA	False	NA	NA	NA	45912155	45898950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
WTC11_00057588	chr20	-	7931	1	FSM	ENSG00000285796.1	ENST00000647856.1	8538	1	-19	626	-19	-626	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGCACTGTGCCTGGC	-45934530	True	NA	NA	False	NA	NA	NA	45935074	45927143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45927100_45935100
WTC11_00057589	chr20	-	4470	28	FSM	ENSG00000198026.8	ENST00000322927.3	4454	28	0	-16	0	16	multi-exon	TRUE	canonical	3	55	junction_23	13.0667800448596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCTGTAGCCTGTAC	-45971158	True	NA	9	True	AATAAA	-39	NA	45972203	45948643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
WTC11_00057590	chr20	-	4689	28	NNC	ENSG00000198026.8	novel	4454	28	NA	NA	-238	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_23	15.8070498762024	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	NA	False	NA	-7	True	AATAAA	-23	NA	45972441	45948659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967632_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
WTC11_00057592	chr20	-	3245	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	-21	0	21	multi-exon	TRUE	canonical	3	88	junction_1	16.8644052152842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTGTGAATATGCTCT	-46087930	True	NA	0	True	ATTAAA	-31	NA	46089962	46060969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
WTC11_00057593	chr20	-	3242	8	NNC	ENSG00000124160.12	novel	3224	8	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	34.0665614972351	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTCATCTTTTTTGG	-46087919	True	NA	-15	True	AATAAA	-41	NA	46089951	46060984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46062890_46063336_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
WTC11_00057595	chr20	-	5736	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	4	0	0	multi-exon	FALSE	canonical	3	41	junction_5	74.0056721216208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-46360386	True	NA	-2	True	ATTAAA	-20	NA	46364404	46345983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
WTC11_00057596	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	37.5029216968821	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-46360407	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
WTC11_00057598	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	82.1786671425944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	-46360383	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
WTC11_00057606	chr20	-	3686	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	-20	0	20	multi-exon	TRUE	canonical	3	78	junction_20	40.5875219590395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTGTACTTGCCCC	-46404467	True	NA	15	True	AATAAA	-39	NA	46406615	46366029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
WTC11_00057607	chr20	-	3588	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	6	-20	-2	15	multi-exon	FALSE	canonical	3	43	junction_20	43.5171230666734	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTTTGTCTGTACTT	-46404478	True	NA	10	True	AATAAA	-34	NA	46406626	46366034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
WTC11_00057614	chr20	-	3002	2	ISM	ENSG00000283757.1	ENST00000472805.2	3876	5	22055	-36	22055	36	3prime_fragment	TRUE	canonical	2	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTGTTAAACACATCAAC	-46458812	True	NA	NA	False	AATAAA	-1	NA	46459302	46454996	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_46457915_46459218
WTC11_00057616	chr20	-	3892	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_4	33.380383460949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCCAAATTTGTCT	-46511339	True	NA	NA	False	AGTAAA	-20	NA	46513554	46499629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
WTC11_00057617	chr20	-	4303	5	NNC	ENSG00000198185.12	novel	2495	6	NA	NA	0	-37	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	41.9791614971047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGAAACTAATAGAGTAAA	-46511339	True	NA	NA	False	AAGAAA	-17	NA	46513554	46499668	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604_46509752_46513047
WTC11_00057618	chr20	-	1812	3	FSM	ENSG00000149635.3	ENST00000279028.3	2123	3	95	216	95	-216	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGACCTTGCATCAT	-46550519	False	NA	NA	False	NA	NA	NA	46550559	46541161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46541928_46545326_46546330_46550516
WTC11_00057619	chr20	-	2739	10	NIC	ENSG00000158296.14	novel	2008	12	NA	NA	613	-5	combination_of_known_junctions	TRUE	canonical	2	4	junction_8	4.62948147911104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAACTTTGGACCTGGA	NA	False	NA	-12	True	AATAAA	-7	NA	46600003	46558433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571_46583670_46588058_46588164_46589159_46589256_46592403_46592447_46596156_46596343_46599970
WTC11_00057620	chr20	-	876	4	FSM	ENSG00000158296.14	ENST00000417157.2	876	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	NA	False	NA	-4	True	ATTAAA	-28	NA	46670139	46608708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042
WTC11_00057621	chr20	-	1625	1	FSM	ENSG00000273893.1	ENST00000610430.1	700	1	-932	7	-932	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTACCCAGTTTTAAGT	-46683295	False	NA	NA	False	AATAAA	-14	NA	46683307	46681682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46681700_46683300
WTC11_00057622	chr20	-	3226	2	FSM	ENSG00000172315.6	ENST00000372114.4	3180	2	4	-50	0	50	multi-exon	FALSE	canonical	3	344	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACTCACTATGCGCCGG	-46682677	True	NA	17	True	AATACA	-2	NA	46689440	46684314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46687232_46689131
WTC11_00057623	chr20	-	2012	2	FSM	ENSG00000172315.6	ENST00000372102.3	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTACTGTCTTGTTTC	-46682677	True	NA	NA	False	NA	NA	NA	46689440	46685533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46687232_46689126
WTC11_00057624	chr20	-	5226	22	FSM	ENSG00000101040.20	ENST00000311275.11	5362	22	137	-1	137	1	multi-exon	FALSE	canonical	2	6	junction_21	119.409108310012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47355486	False	NA	0	True	ATTAAA	-19	NA	47355520	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47355449
WTC11_00057625	chr20	-	5195	22	NIC	ENSG00000101040.20	novel	5281	23	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_21	109.974290955668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47355250	True	NA	-1	True	ATTAAA	-18	NA	47356697	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
WTC11_00057626	chr20	-	4992	22	FSM	ENSG00000101040.20	ENST00000360911.7	4991	22	0	-1	0	1	multi-exon	FALSE	canonical	3	84	junction_21	93.9371141024446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47355259	True	NA	0	True	ATTAAA	-19	NA	47356706	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47356656
WTC11_00057627	chr20	-	5091	22	FSM	ENSG00000101040.20	ENST00000611941.4	5090	22	0	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_8	115.714951987108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47356855	False	NA	0	True	ATTAAA	-19	NA	47356889	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
WTC11_00057628	chr20	-	5472	23	FSM	ENSG00000101040.20	ENST00000446994.6	5471	23	0	-1	0	1	multi-exon	FALSE	canonical	3	84	junction_22	103.090398026631	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47356855	False	NA	0	True	ATTAAA	-19	NA	47356889	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
WTC11_00057629	chr20	-	5240	23	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12292	0	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_20	70.9072989284059	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47361319	True	NA	-1	True	ATTAAA	-18	NA	47369181	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
WTC11_00057630	chr20	-	5172	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12298	1	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_20	65.5787489515436	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47361325	True	NA	0	True	ATTAAA	-19	NA	47369187	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
WTC11_00057631	chr20	-	5112	21	NIC	ENSG00000101040.20	novel	3832	22	NA	NA	-60	-4	combination_of_known_junctions	FALSE	canonical	3	36	junction_20	106.67064966522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTGGTCGTCCTCGAA	-47319070	False	NA	-5	True	ATTAAA	-14	NA	47319121	47209217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47318950
WTC11_00057632	chr20	-	4867	21	NNC	ENSG00000101040.20	novel	4991	22	NA	NA	-12223	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	106.563725066272	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTGGTCGTCCTCGAA	-47361250	True	NA	-5	True	ATTAAA	-14	NA	47369112	47209217	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
WTC11_00057640	chr20	-	1093	1	FSM	ENSG00000273451.1	ENST00000609320.1	1006	1	-31	-56	-31	56	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAAATCAGGTGTGGG	-47349159	False	NA	NA	False	AAAAAG	-45	NA	47349173	47348080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47348100_47349200
WTC11_00057641	chr20	-	4897	21	FSM	ENSG00000196562.15	ENST00000359930.8	4915	21	0	18	0	-18	multi-exon	FALSE	canonical	3	23	junction_20	45.6776477065096	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCCAACAGGGATTTAA	-47786489	True	NA	NA	False	NA	NA	NA	47786586	47656929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
WTC11_00057642	chr20	-	3816	21	FSM	ENSG00000196562.15	ENST00000688720.1	3808	21	-8	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	31.8466638755145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTGTGTCTGTTT	-47784007	True	NA	1	True	NA	NA	NA	47785489	47657405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
WTC11_00057644	chr20	-	3733	20	NIC	ENSG00000196562.15	novel	3808	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	23.5021069368453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGTAAAAGGCCAT	-47784007	True	NA	-28	True	NA	NA	NA	47785489	47657434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
WTC11_00057649	chr20	-	6755	40	FSM	ENSG00000124126.14	ENST00000371941.4	6752	40	0	-3	0	3	multi-exon	TRUE	canonical	3	29	junction_36	7.94913150288949	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTGATCTGCTTCA	-48827376	True	NA	NA	False	ATTAAA	-23	NA	48827999	48624248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_48625928_48627547_48627616_48627860_48627964_48629448_48629622_48630727_48630795_48632276_48632392_48632495_48632640_48634675_48634776_48636462_48636684_48637710_48637753_48639765_48639895_48642167_48642259_48642406_48642490_48644408_48644498_48645850_48646058_48649299_48649577_48649995_48650207_48650893_48651056_48651395_48651584_48652585_48652707_48653360_48653498_48655289_48655376_48657039_48657189_48658135_48658229_48659918_48660062_48666282_48666356_48676192_48676269_48679359_48679410_48679650_48679755_48681234_48681336_48688656_48688805_48690946_48691097_48692671_48692791_48700752_48700887_48708259_48708422_48726289_48726392_48734545_48734651_48745024_48745148_48747808_48747881_48827641
WTC11_00057650	chr20	-	431	1	FSM	ENSG00000230758.1	ENST00000433229.1	246	1	52	-237	52	237	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTAATCCCAGCATTT	-49038475	False	NA	NA	False	NA	NA	NA	49038550	49038119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49038100_49038600
WTC11_00057651	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	286.575660982324	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-49170871	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
WTC11_00057652	chr20	-	3360	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	33	-182	0	0	multi-exon	FALSE	canonical	3	643	junction_8	86.7715711253147	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGGTCCTGTTGAG	-49170871	True	NA	NA	False	AATAAA	-13	NA	49188334	49113340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
WTC11_00057653	chr20	-	3303	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	33	-182	0	0	multi-exon	FALSE	canonical	3	92	junction_11	290.974026843498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGGTCCTGTTGAG	-49170871	True	NA	NA	False	AATAAA	-13	NA	49188334	49113340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
WTC11_00057654	chr20	-	3413	13	FSM	ENSG00000124214.21	ENST00000371828.7	3411	13	0	-2	0	0	multi-exon	FALSE	canonical	3	115	junction_8	207.807536490432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-49170904	True	NA	NA	False	AATAAA	-15	NA	49188367	49113338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
WTC11_00057656	chr20	-	3329	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	5	0	5	0	multi-exon	FALSE	canonical	3	50	junction_13	279.188553706469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170899	True	NA	-10	True	AATAAA	-14	NA	49188362	49113522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
WTC11_00057660	chr20	-	7556	14	FSM	ENSG00000124201.15	ENST00000396105.6	7209	14	-347	0	22	0	multi-exon	FALSE	canonical	3	17	junction_5	7.92867613952315	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGTCCACGTGTATCC	-49277998	True	NA	-2	True	ATTAAA	-18	NA	49278404	49245899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49249712_49251526_49251623_49252719_49252831_49253665_49253812_49254494_49254650_49255807_49255948_49257416_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275888_49278020
WTC11_00057661	chr20	-	7209	14	FSM	ENSG00000124201.15	ENST00000371752.5	7212	14	0	3	0	0	multi-exon	FALSE	canonical	2	4	junction_13	10.6409947481788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGTCCACGTGTATCC	-49277304	True	NA	-2	True	ATTAAA	-18	NA	49278065	49245899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49249712_49251526_49251623_49252719_49252831_49253665_49253812_49254494_49254650_49255807_49255948_49257416_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275880_49278020
WTC11_00057662	chr20	-	5570	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	9.78787357579789	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-49567142	True	NA	-5	True	ATTAAA	-19	NA	49568137	49503873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
WTC11_00057663	chr20	-	4722	9	FSM	ENSG00000158470.5	ENST00000371711.4	4722	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_7	11.9784963580576	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGGTCATTTCTCTT	-49704408	True	NA	0	True	AGTAAA	-23	NA	49713878	49632944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49636460_49637340_49637443_49639677_49639801_49640477_49640666_49642467_49642585_49643525_49643651_49646964_49647079_49656567_49656703_49713575
WTC11_00057664	chr20	-	309	2	Genic_Genomic	ENSG00000231878.1	novel	252	1	NA	NA	14	345	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAATGAAATA	NA	False	NA	NA	False	AATAAA	-17	NA	49729828	49729245	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_49729324_49729597
WTC11_00057666	chr20	-	4047	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	-4	0	4	multi-exon	FALSE	canonical	3	59	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGGGTTTTATGTCC	-49914300	True	NA	NA	False	AATAAA	-23	NA	49915529	49903386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49906846_49908154_49908593_49915379
WTC11_00057667	chr20	-	4018	4	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	1	3	junction_1	29.3371209675842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGAAGTGTTTGGGGT	-49914300	True	NA	NA	False	AATAAA	-14	NA	49915529	49903395	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_49903903_49903922_49906846_49908154_49908593_49915379
WTC11_00057668	chr20	-	2124	5	NNC	ENSG00000244687.13	novel	2258	5	NA	NA	0	46718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1213.57537363775	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATAGCCAGGTGTGGGC	-50094416	True	NA	NA	False	NA	NA	NA	50113139	50034405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_50034431_50081123_50082915_50084128_50084255_50096671_50096821_50113106
WTC11_00057669	chr20	-	2123	5	NNC	ENSG00000244687.13	novel	2258	5	NA	NA	0	46718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1213.57537363775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATAGCCAGGTGTGGGC	-50094422	True	NA	NA	False	NA	NA	NA	50113145	50034405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_50034431_50081130_50082915_50084128_50084255_50096671_50096821_50113106
WTC11_00057670	chr20	-	1884	5	NNC	ENSG00000244687.13	novel	2258	5	NA	NA	0	46718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1213.57537363775	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATAGCCAGGTGTGGGC	-50094422	True	NA	NA	False	NA	NA	NA	50113145	50034405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_50034431_50081369_50082915_50084128_50084255_50096671_50096821_50113106
WTC11_00057671	chr20	-	2556	5	NNC	ENSG00000244687.13	novel	2459	5	NA	NA	0	46718	intron_retention	FALSE	non_canonical	0	0	junction_1	1407.20651913641	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATAGCCAGGTGTGGGC	-50114890	True	NA	NA	False	NA	NA	NA	50115949	50034405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_50034431_50081123_50082915_50084128_50084255_50096671_50096821_50115484
WTC11_00057672	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1307.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094416	True	NA	-1	True	AATAAA	-25	NA	50113139	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50096671_50096821_50113106
WTC11_00057673	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2636	junction_3	123.839501865205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094427	True	NA	-1	True	AATAAA	-25	NA	50113150	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
WTC11_00057674	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1432.34440690778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094475	True	NA	-1	True	AATAAA	-25	NA	50113198	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
WTC11_00057675	chr20	-	2414	5	FSM	ENSG00000244687.13	ENST00000617119.4	2432	5	18	0	-8	0	multi-exon	FALSE	canonical	1	4	junction_3	1433.34277128676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094457	True	NA	-1	True	AATAAA	-25	NA	50113180	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50111288_50111563_50113106
WTC11_00057676	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1299.25217807099	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
WTC11_00057680	chr20	-	3320	3	FSM	ENSG00000244687.13	ENST00000467839.5	566	3	0	-2754	0	0	multi-exon	FALSE	canonical	3	2636	junction_2	82	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094423	True	NA	-1	True	AATAAA	-25	NA	50113146	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50084255_50096671_50096821_50113106
WTC11_00057686	chr20	-	7704	6	FSM	ENSG00000240849.11	ENST00000371652.9	7703	6	0	-1	0	1	multi-exon	FALSE	canonical	3	217	junction_5	29.5472502950782	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTATTTTTTCTTA	-50149407	True	NA	2	True	AATAAA	-20	NA	50153723	50118252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50153516
WTC11_00057689	chr20	-	202	1	FSM	ENSG00000239742.3	ENST00000474091.3	317	1	86	29	86	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGCAATATAGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	50557912	50557710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50557700_50557900
WTC11_00057690	chr20	-	811	3	FSM	ENSG00000042062.13	ENST00000482129.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGGAGCTTCACTGTGCG	NA	False	NA	NA	False	NA	NA	NA	50595192	50592537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50592547_50593034_50593197_50594552
WTC11_00057691	chr20	-	7361	3	FSM	ENSG00000101126.18	ENST00000371602.9	7360	3	0	-1	0	1	multi-exon	FALSE	canonical	3	101	junction_2	8.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGGTGTGTTTTGTTT	NA	False	NA	2	True	NA	NA	NA	50905558	50888914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888
WTC11_00057692	chr20	-	6673	6	FSM	ENSG00000101126.18	ENST00000621696.5	6672	6	2	-3	2	1	multi-exon	FALSE	canonical	3	9	junction_3	45.2123876830233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGGTGTGTTTTGTTT	-50930771	True	NA	2	True	NA	NA	NA	50931435	50888914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888_50904002_50904765_50904850_50928650_50928826_50930825
WTC11_00057694	chr20	-	6396	5	FSM	ENSG00000101126.18	ENST00000396029.8	6396	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	36.2973828257631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCTACTGTTTGCT	-50931335	False	NA	-1	True	AATAAA	-17	NA	50931375	50889047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888_50904002_50928650_50928826_50930825
WTC11_00057696	chr20	-	1057	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	-3	0	0	multi-exon	FALSE	canonical	3	327	junction_8	32.4027390817505	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956420	True	NA	-18	True	AATAAA	-26	NA	50958532	50934866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
WTC11_00057697	chr20	-	962	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	-3	0	0	multi-exon	FALSE	canonical	3	17	junction_3	165.891195935435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956420	True	NA	-18	True	AATAAA	-26	NA	50958532	50934866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
WTC11_00057698	chr20	-	1256	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	23	-118	0	118	multi-exon	FALSE	canonical	3	29	junction_3	148.606199295776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTAACTGATGAAATG	-50956420	True	NA	-81	True	NA	NA	NA	50958532	50934748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
WTC11_00057699	chr20	-	1029	8	NIC	ENSG00000000419.14	novel	1054	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	128.685504947812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGCCTTCATTAGAG	-50956420	True	NA	-20	True	AATAAA	-24	NA	50958532	50934868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
WTC11_00057703	chr20	-	2355	5	NNC	ENSG00000026559.14	novel	967	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	44.7604736346701	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021498	True	NA	NA	False	AATACA	-17	NA	51023094	51003655	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013850_51022869
WTC11_00057704	chr20	-	2189	3	FSM	ENSG00000026559.14	ENST00000371571.5	2189	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	43	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021511	True	NA	NA	False	AATACA	-17	NA	51023107	51003655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51004807_51009564_51010365_51022869
WTC11_00057705	chr20	-	1083	3	FSM	ENSG00000026559.14	ENST00000439216.5	1096	3	13	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	-51021498	True	NA	NA	False	NA	NA	NA	51023094	51009564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51010365_51012358_51012417_51022869
WTC11_00057706	chr20	-	1199	4	FSM	ENSG00000026559.14	ENST00000424171.5	967	4	0	-232	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.0675059857013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	-51021498	True	NA	NA	False	NA	NA	NA	51023094	51009564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51010365_51012358_51012417_51013728_51013845_51022869
WTC11_00057708	chr20	-	7857	28	FSM	ENSG00000054793.14	ENST00000338821.6	7862	28	0	5	0	-5	multi-exon	TRUE	canonical	2	15	junction_25	4.76556003154573	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCATAAGCTTCATAT	-51768046	True	NA	NA	False	TATAAA	-14	NA	51768390	51596518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51601348_51604816_51605021_51607526_51607585_51608517_51608627_51610100_51610166_51613676_51613833_51617489_51617555_51618661_51618807_51618953_51619044_51622073_51622173_51625191_51625363_51627599_51627684_51628979_51629073_51639342_51639505_51656937_51657151_51669996_51670110_51671114_51671258_51674152_51674314_51676131_51676209_51689063_51689140_51690738_51690820_51694007_51694103_51696092_51696145_51697423_51697483_51712965_51713075_51725818_51725933_51729833_51729979_51768301
WTC11_00057709	chr20	-	5540	3	ISM	ENSG00000101115.13	ENST00000217086.9	5209	4	9595	0	152	0	3prime_fragment	FALSE	canonical	3	194	junction_2	42	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51792905	False	NA	-38	True	AATAAA	-23	NA	51792926	51782330	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_51784685_51788860_51789142_51790021
WTC11_00057710	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	49.5939064357261	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51793908	True	NA	-38	True	AATAAA	-23	NA	51802521	51782330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
WTC11_00057711	chr20	-	5389	5	NIC	ENSG00000101115.13	novel	5209	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	118.072805929223	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51793920	True	NA	-38	True	AATAAA	-23	NA	51802533	51782330	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_51784685_51788860_51789142_51790021_51792353_51792758_51792927_51802278
WTC11_00057712	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	97.1642366763044	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-51793862	True	NA	-89	True	AAGAAA	-21	NA	51802475	51784264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
WTC11_00057713	chr20	-	2545	9	FSM	ENSG00000020256.20	ENST00000361387.6	2545	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	25.0599281722833	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	-52189507	True	NA	-5	True	AATAAA	-19	NA	52191697	52084010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
WTC11_00057714	chr20	-	751	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	11	0	11	0	multi-exon	FALSE	canonical	3	11	junction_4	13.4420050587701	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	-52104889	False	147	NA	False	NA	NA	NA	52104912	52085240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
WTC11_00057715	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.761176830544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189570	True	NA	-13	True	AATAAA	-22	NA	52191760	52151277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
WTC11_00057716	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	23.832750575626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189578	True	NA	-13	True	AATAAA	-22	NA	52191768	52151277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
WTC11_00057717	chr20	-	3474	6	FSM	ENSG00000020256.20	ENST00000216923.5	3057	6	-417	0	-417	0	multi-exon	FALSE	canonical	3	53	junction_1	12.2474487139159	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	NA	False	NA	-13	True	AATAAA	-22	NA	52192196	52151277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
WTC11_00057719	chr20	-	729	3	NNC	ENSG00000020256.20	novel	1841	9	NA	NA	2	-24749	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACAAGGATATTCATTT	-52189576	True	NA	NA	False	AATAAA	-22	NA	52191766	52185009	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_52185323_52186831_52187072_52191590
WTC11_00057720	chr20	-	5818	6	FSM	ENSG00000171940.14	ENST00000371471.7	5790	6	-21	-7	-21	7	multi-exon	FALSE	canonical	3	5	junction_5	15.3284050050878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTGTTTATTGTGTTT	-53593564	False	NA	2	True	AATATA	-25	NA	53593860	53567063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53593755
WTC11_00057721	chr20	-	5893	6	NNC	ENSG00000171940.14	novel	5790	6	NA	NA	-448	6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	13.9283882771841	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGTGTTTATTGTGTT	-53593991	False	NA	1	True	AATATA	-24	NA	53594287	53567064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53594106
WTC11_00057722	chr20	-	2120	10	FSM	ENSG00000087586.18	ENST00000371356.6	2112	10	0	-8	0	7	multi-exon	FALSE	canonical	3	20	junction_9	377.79830009617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGTAATTCTTTCCA	-56378397	True	NA	-9	True	AATAAA	-23	NA	56392196	56369381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392167
WTC11_00057723	chr20	-	2256	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	-8	0	7	multi-exon	FALSE	canonical	3	148	junction_8	296.17855151074	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGTAATTCTTTCCA	-56378406	True	NA	-9	True	AATAAA	-23	NA	56392205	56369381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
WTC11_00057724	chr20	-	2041	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	-8	0	7	multi-exon	FALSE	canonical	3	285	junction_8	253.331798240963	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGTAATTCTTTCCA	-56378416	True	NA	-9	True	AATAAA	-23	NA	56392215	56369381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
WTC11_00057725	chr20	-	2153	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	-8	0	7	multi-exon	FALSE	canonical	3	12	junction_9	379.653773396658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGTAATTCTTTCCA	-56378416	True	NA	-9	True	AATAAA	-23	NA	56392215	56369381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
WTC11_00057726	chr20	-	2167	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	2	0	-2	multi-exon	FALSE	canonical	3	195	junction_8	281.392408390845	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGAGTGCTGTGTA	NA	False	NA	-19	True	AATAAA	-13	NA	56392337	56369391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
WTC11_00057727	chr20	-	2220	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	3	0	3	0	multi-exon	FALSE	canonical	3	124	junction_9	361.773034366938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378493	True	NA	-17	True	AATAAA	-15	NA	56392292	56369389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
WTC11_00057728	chr20	-	2235	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	3	0	-2	multi-exon	FALSE	canonical	3	67	junction_9	374.090139002307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGAGTGCTGTGTA	-56378496	True	NA	-19	True	AATAAA	-13	NA	56392295	56369391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
WTC11_00057729	chr20	-	2456	11	NIC	ENSG00000087586.18	novel	2145	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	393.513201811578	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378406	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56391942
WTC11_00057730	chr20	-	2067	10	NIC	ENSG00000087586.18	novel	2238	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	367.766062250461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTTTTCTCTGGTG	-56378390	True	NA	-6	True	AATAAA	-15	NA	56392189	56369664	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
WTC11_00057735	chr20	-	4034	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	-13	0	13	multi-exon	FALSE	canonical	3	144	junction_3	12.7856256093404	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTGTGTGTTGTGT	-57265944	True	NA	-2	True	AATAAA	-34	NA	57266641	57168739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
WTC11_00057736	chr20	-	1749	6	FSM	ENSG00000101144.13	ENST00000450594.6	1857	6	0	108	0	-108	multi-exon	FALSE	canonical	3	144	junction_2	13.1514257782189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCATTGCCATGTCAT	-57266600	False	NA	NA	False	NA	NA	NA	57266629	57173103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
WTC11_00057737	chr20	-	519	1	ISM	ENSG00000124097.8	ENST00000522557.2	2110	2	6248	641	6248	-641	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGAAAAGAAGGCTGCGA	-57480569	False	NA	NA	False	AAGAAA	-45	NA	57489118	57488599	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_57488600_57489100
WTC11_00057738	chr20	-	4954	4	FSM	ENSG00000124225.16	ENST00000341744.8	4954	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	24.2395452835971	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTTTCACTTCTTT	-57709993	False	NA	-2	True	AATAAA	-19	NA	57710015	57648395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57709473
WTC11_00057739	chr20	-	4542	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	4	0	0	multi-exon	FALSE	canonical	3	28	junction_3	77.6587978846498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTTTCACTTCTTT	-57709823	True	NA	-2	True	AATAAA	-19	NA	57710589	57648395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
WTC11_00057740	chr20	-	859	5	FSM	ENSG00000124225.16	ENST00000395819.3	859	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	95.2129192914491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCGAGCAGCAGCTGGA	-57709738	False	NA	NA	False	NA	NA	NA	57709760	57652406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57700015_57700187_57709473
WTC11_00057741	chr20	-	4680	10	FSM	ENSG00000124224.18	ENST00000497138.5	4680	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.92160768674447	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATGTCCTGTTCCATT	NA	False	NA	-8	True	AATAAA	-22	NA	58246244	58228939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58231928_58232687_58232923_58235239_58235375_58236153_58236275_58238210_58238312_58239240_58239403_58239659_58239846_58240514_58240611_58243511_58243706_58245782
WTC11_00057742	chr20	-	3593	7	ISM	ENSG00000124224.18	ENST00000495058.6	3855	10	36627	0	13574	0	3prime_fragment	FALSE	canonical	3	18	junction_1	10.9607886983049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTCCTCCAGGCTGGGG	NA	False	NA	NA	False	AAAAAG	-3	NA	58272825	58242369	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_58243706_58245782_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768
WTC11_00057743	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.9252361059697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	-58308598	True	NA	-6	True	ATTAAA	-13	NA	58309439	58245745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
WTC11_00057744	chr20	-	3872	4	FSM	ENSG00000198768.11	ENST00000371149.8	3887	4	15	0	15	0	multi-exon	FALSE	canonical	2	10	junction_2	4.98887651569859	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGCTGGTTATTAAA	-58515344	True	NA	-4	True	AATAAA	-19	NA	58515384	58459100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58461555_58467105_58467659_58470608_58470748_58514658
WTC11_00057745	chr20	-	727	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	-142	9	-142	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTGGTGGATGTTTG	NA	False	NA	-9	True	AATAAA	-9	NA	58817867	58817140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58817100_58817900
WTC11_00057746	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8874953737966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-58848506	True	NA	-6	True	AATAAA	-33	NA	58850903	58818918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
WTC11_00057747	chr20	-	481	1	FSM	ENSG00000225806.8	ENST00000605534.1	577	1	-71	167	-48	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCTGCTTATTTACAA	-58885020	False	NA	NA	False	AATAGA	-14	NA	58885052	58884571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58884600_58885100
WTC11_00057748	chr20	-	4137	4	FSM	ENSG00000101160.15	ENST00000681457.1	7329	4	3194	-2	-2028	0	multi-exon	FALSE	canonical	1	2	junction_1	3.74165738677394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGAAGCTTTTGTTATT	-59000283	False	NA	NA	False	AATAAA	-16	NA	59001644	58992116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464
WTC11_00057749	chr20	-	1502	6	FSM	ENSG00000101160.15	ENST00000217131.6	1502	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.92574776766556	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	-59005893	True	NA	-5	True	AATAAA	-21	NA	59007254	58995184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
WTC11_00057750	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_2	177.5	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-59011449	True	NA	-7	True	AATAAA	-16	NA	59032335	59025474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59028842_59030302_59030430_59032219
WTC11_00057751	chr20	-	697	3	FSM	ENSG00000124172.10	ENST00000395663.1	697	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGAAGAGATGGCAGTG	-59011406	True	NA	NA	False	ATTAAA	-11	NA	59032292	59025972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59026470_59030302_59030430_59032219
WTC11_00057752	chr20	-	2503	6	FSM	ENSG00000101166.16	ENST00000355937.9	2503	6	0	0	0	0	multi-exon	TRUE	canonical	3	546	junction_3	51.6581068178074	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCCTGATTATAATT	-59035440	True	NA	-4	True	AATAAA	-18	NA	59042786	59033144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037281_59038465_59038635_59042698
WTC11_00057753	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	261.379991583136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	-59035459	True	NA	NA	False	NA	NA	NA	59042805	59034633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
WTC11_00057756	chr20	-	3459	1	FSM	ENSG00000132825.7	ENST00000370996.5	3643	1	8	176	8	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGTTGTGAGCCATT	-59940183	True	NA	-17	True	ATTAAA	-11	NA	59940297	59936838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59936800_59940300
WTC11_00057757	chr20	-	4681	15	FSM	ENSG00000130699.20	ENST00000252996.9	4699	15	18	0	18	0	multi-exon	FALSE	canonical	3	10	junction_14	5.45342057046468	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCCTATTTTTCC	-62063384	True	NA	0	True	ATTAAA	-17	NA	62065863	61974797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_61976336_61997549_61997670_61998135_61998193_61998982_61999109_62000123_62000255_62000551_62000722_62003159_62003275_62003730_62003879_62006509_62006759_62007546_62007637_62009051_62009175_62010045_62010166_62012814_62012935_62014546_62014708_62064450
WTC11_00057758	chr20	-	1826	1	FSM	ENSG00000130699.20	ENST00000609041.1	2487	1	602	59	215	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTTGAGCCTAGGAGTTC	-62006368	False	NA	NA	False	NA	NA	NA	62006393	62004567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62004600_62006400
WTC11_00057760	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4096	junction_4	573.471494980836	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	-62110908	True	NA	-20	True	AATAAA	-16	NA	62143394	62136732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
WTC11_00057761	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	1789.30437290275	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-62110954	True	NA	-4	True	TTTAAA	-23	NA	62143440	62136802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
WTC11_00057763	chr20	-	925	3	FSM	ENSG00000101182.15	ENST00000370858.3	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	4268	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAACTGCTGATAAC	-62110944	True	NA	NA	False	NA	NA	NA	62143430	62139330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62139906_62140817_62140945_62143207
WTC11_00057764	chr20	-	2692	3	FSM	ENSG00000101180.17	ENST00000340177.10	2692	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.5	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGGACTTTGTGGGG	-62219867	True	NA	0	True	AATAAA	-24	NA	62220278	62214959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62216927_62218490_62218658_62219720
WTC11_00057765	chr20	-	3160	17	FSM	ENSG00000130702.15	ENST00000370691.6	3160	17	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_4	160.425496239688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTGACTTAAATACGG	-62314849	False	NA	75	True	ATTAAA	-24	NA	62314879	62309058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62313087_62313251_62313326_62313461_62313648_62313803_62314303
WTC11_00057766	chr20	-	11432	80	FSM	ENSG00000130702.15	ENST00000252999.7	11426	80	0	-6	0	0	multi-exon	TRUE	canonical	3	58	junction_57	152.448691135535	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTGACTTAAATACGG	-62358182	True	NA	75	True	ATTAAA	-24	NA	62367312	62309058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319014_62319683_62319796_62320558_62320670_62320738_62320891_62322018_62322169_62322268_62322450_62322657_62322759_62323455_62323671_62323775_62323857_62324079_62324205_62324440_62324555_62325315_62325547_62326676_62326761_62326864_62326967_62327232_62327407_62327528_62327670_62327865_62328011_62328240_62328446_62328843_62329056_62329137_62329254_62329776_62329917_62330487_62330615_62330742_62330945_62331031_62331130_62332371_62332481_62332556_62332718_62333089_62333244_62333374_62333482_62333563_62333707_62333900_62334040_62334185_62334343_62334521_62334622_62335020_62335127_62335216_62335270_62336339_62336446_62336733_62336787_62337589_62337728_62337803_62337939_62338015_62338151_62338231_62338370_62338467_62338609_62345817_62345878_62346080_62346216_62346505_62346597_62346681_62346801_62346912_62347029_62351703_62351802_62351908_62352080_62352241_62352361_62353133_62353252_62362399_62362553_62366948
WTC11_00057767	chr20	-	780	4	FSM	ENSG00000130702.15	ENST00000495695.1	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_3	23.3285709425636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCATTTTTAATTGTGAG	-62310376	False	NA	-11	True	AATAAA	-33	NA	62310412	62309144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177
WTC11_00057774	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	-62386160	True	NA	-3	True	AGTAAA	-18	NA	62386970	62386302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62386300_62387000
WTC11_00057775	chr20	-	3790	10	FSM	ENSG00000149679.12	ENST00000279101.10	3783	10	0	-7	0	7	multi-exon	FALSE	canonical	3	75	junction_5	10.4077369131969	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTGTCTCCTTTCAA	-62406036	True	NA	-1	True	TTTAAA	-22	NA	62407285	62388626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156_62394266_62394936_62395015_62396314_62396408_62396520_62396593_62406914
WTC11_00057776	chr20	-	3794	1	FSM	ENSG00000275437.1	ENST00000616512.1	3700	1	-110	16	-110	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCAGATTTCTCTTCC	-62404796	False	NA	-24	True	NA	NA	NA	62406045	62402251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62402300_62406000
WTC11_00057777	chr20	-	2636	7	FSM	ENSG00000130700.7	ENST00000252997.3	2620	7	0	-16	0	16	multi-exon	FALSE	canonical	2	9	junction_2	4.7169905660283	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCATCACCCATGGGGT	-62475817	True	NA	17	True	AATAAA	-30	NA	62475995	62463480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62464992_62465339_62465465_62465833_62465922_62466425_62466552_62473402_62473579_62474998_62475543_62475929
WTC11_00057778	chr20	-	1459	2	Antisense	novelGene_ENSG00000060491.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	137	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCCCCAGACGAACT	NA	False	NA	NA	False	NA	NA	NA	62814001	62812482	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr20_-_62813201_62813260
WTC11_00057779	chr20	-	2625	6	FSM	ENSG00000101190.13	ENST00000335351.8	2625	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	13.7782437197199	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTGTACACAACCTTT	-62860275	True	NA	96	True	NA	NA	NA	62861822	62841004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62842098_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62861023
WTC11_00057780	chr20	-	2571	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	79	-110	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	23.6016948543955	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTAGCCAGTCATTAAT	-62860137	False	NA	-14	True	ATTAAA	-18	NA	62861684	62841114	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62842098_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62860829
WTC11_00057783	chr20	-	2896	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	0	-6356	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	29.7011784277998	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTTAATGTTTTGG	-62860216	True	NA	-10	True	AATAAA	-16	NA	62861763	62851493	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62852723_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62860829
WTC11_00057784	chr20	-	8572	16	FSM	ENSG00000101191.17	ENST00000266070.8	8574	16	0	2	0	-2	multi-exon	FALSE	canonical	3	67	junction_8	84.8347413111712	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTCGGGTCTTCATCA	-62932877	True	NA	-6	True	AATAAA	-16	NA	62937952	62877739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62882415_62890959_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
WTC11_00057785	chr20	-	7833	15	NNC	ENSG00000101191.17	novel	7551	15	NA	NA	-481	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_14	91.4179960401671	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCCTTGTTTGTTTGAA	-62926876	False	250	-4	True	AATAAA	-16	NA	62926986	62887213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926639
WTC11_00057786	chr20	-	2714	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	-7	0	0	multi-exon	FALSE	canonical	3	106	junction_5	71.5524982093567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-62924357	True	NA	-7	True	TATAAA	-24	NA	62926469	62904997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
WTC11_00057787	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	77.6273147803014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-62932877	True	NA	-7	True	TATAAA	-24	NA	62937952	62904997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
WTC11_00057788	chr20	-	732	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	-57	2	-57	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTTGCTAGTGGAGT	-62924279	False	NA	-2	True	AATAAA	-17	NA	62929354	62928622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62928600_62929400
WTC11_00057789	chr20	-	2634	1	FSM	ENSG00000125533.6	ENST00000612929.2	1038	1	27	-1623	27	1623	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAACTCATCTAAAA	-63006873	True	NA	NA	False	NA	NA	NA	63006937	63004303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63004300_63006900
WTC11_00057790	chr20	-	3205	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	-7	0	7	multi-exon	FALSE	canonical	3	373	junction_4	15.2643375224737	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCATTCTTCACCCTA	-63209701	True	NA	4	True	AATAAA	-25	NA	63216131	63195421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
WTC11_00057793	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	12.8894875339902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254170	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
WTC11_00057794	chr20	-	1339	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254241	True	NA	-5	True	AATAAA	-18	NA	63254534	63240783	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
WTC11_00057795	chr20	-	1375	1	FSM	ENSG00000101204.18	ENST00000630240.1	1603	1	104	124	104	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCCGCCCATGGCTG	NA	False	NA	NA	False	NA	NA	NA	63351027	63349652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63349700_63351000
WTC11_00057796	chr20	-	241	1	FSM	ENSG00000101204.18	ENST00000628606.1	183	1	-165	107	19	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTACGGGGCGCGGGA	-63361205	True	NA	NA	False	NA	NA	NA	63361330	63361089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63361100_63361300
WTC11_00057797	chr20	-	9011	15	FSM	ENSG00000075043.20	ENST00000360480.7	2775	15	0	-6236	0	0	multi-exon	FALSE	canonical	1	5	junction_2	416.379095321089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTGTGTGGCCTCCTCA	-63466225	False	NA	-1	True	AGTAAA	-19	NA	63472505	63400209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
WTC11_00057798	chr20	-	464	3	FSM	ENSG00000075043.20	ENST00000629318.1	545	3	0	81	0	-81	multi-exon	FALSE	canonical	3	14	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCGGGGCCTCCTC	NA	False	NA	-82	True	NA	NA	NA	63415035	63413356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63413582_63414087_63414194_63414902
WTC11_00057800	chr20	-	1442	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	-1	0	1	multi-exon	FALSE	canonical	3	760	junction_4	81.8096346803395	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGGTTTATTTC	-63466375	True	NA	82	True	TTTAAA	-21	NA	63472655	63433676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
WTC11_00057802	chr20	-	1777	8	FSM	ENSG00000101210.13	ENST00000217182.6	1773	8	0	-4	0	3	multi-exon	TRUE	canonical	3	75	junction_7	19.131126469709	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCGCCTGCTGCTGGG	-63497852	True	NA	0	True	AATAAA	-18	NA	63499083	63488009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63488426_63488917_63489153_63490478_63490736_63493136_63493288_63494804_63495102_63495855_63496036_63497619_63497835_63499057
WTC11_00057804	chr20	-	4560	9	FSM	ENSG00000101216.11	ENST00000266068.5	4559	9	0	-1	0	1	multi-exon	FALSE	canonical	3	64	junction_2	7.31009575860672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTATCTCTTGGAAT	-63618698	False	NA	-8	True	AATAAA	-18	NA	63619876	63587600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266
WTC11_00057805	chr20	-	4287	10	FSM	ENSG00000101216.11	ENST00000370077.2	4280	10	0	-7	0	4	multi-exon	FALSE	canonical	3	64	junction_2	7.05183629005441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTATCTCTTGGAATGAA	-63625923	True	NA	-5	True	AATAAA	-21	NA	63627101	63587597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266_63619455_63626955
WTC11_00057806	chr20	-	1927	3	NNC	ENSG00000197457.10	novel	2351	5	NA	NA	9761	-3	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	105.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACTGTCTGTGTGTGT	-63641900	True	NA	-11	True	AATAAA	-22	NA	63642633	63639707	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63641398_63642107_63642300_63642588
WTC11_00057807	chr20	-	2197	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9675	0	at_least_one_novel_splicesite	FALSE	canonical	3	171	junction_2	54	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63642703	False	NA	-15	True	AATAAA	-18	NA	63642719	63639711	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63641398_63642107_63642300_63642400
WTC11_00057808	chr20	-	2252	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	-4	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	101.801277005743	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACTGTCTGTGTGTGT	-63650556	True	NA	-11	True	AATAAA	-22	NA	63653424	63639707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
WTC11_00057810	chr20	-	2889	7	FSM	ENSG00000101246.20	ENST00000612256.4	2974	7	0	85	0	-80	multi-exon	FALSE	canonical	3	184	junction_3	24.9449393665328	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCGGCTGCCCTCCCA	-63704312	False	NA	NA	False	NA	NA	NA	63707658	63698726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998
WTC11_00057811	chr20	-	2407	8	FSM	ENSG00000101246.20	ENST00000619493.4	2456	8	0	49	0	-45	multi-exon	TRUE	canonical	3	19	junction_7	72.5354241395336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGTTTTATGAAAAAG	-63704507	True	NA	NA	False	NA	NA	NA	63707853	63698691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707809
WTC11_00057812	chr20	-	2473	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	45	0	-45	multi-exon	FALSE	canonical	3	65	junction_7	57.5052792607526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGTTTTATGAAAAAG	-63704630	True	NA	NA	False	NA	NA	NA	63707976	63698691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
WTC11_00057813	chr20	-	2505	6	FSM	ENSG00000101246.20	ENST00000614942.4	2554	6	0	49	0	-45	multi-exon	FALSE	canonical	2	10	junction_1	92.985160106331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGTTTTATGAAAAAG	-63704667	True	NA	NA	False	NA	NA	NA	63708013	63698691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
WTC11_00057814	chr20	-	1720	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	-22	0	0	multi-exon	FALSE	canonical	3	65	junction_6	62.0360558241916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704570	True	NA	-2	True	NA	NA	NA	63707916	63699455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
WTC11_00057816	chr20	-	1603	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704570	True	NA	-27	True	AATAAA	-28	NA	63707916	63699496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
WTC11_00057819	chr20	-	201	1	FSM	ENSG00000274501.1	ENST00000613401.1	306	1	-82	187	-82	-187	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTCAAATGCACTGCA	NA	False	NA	NA	False	GGGGCT	-8	NA	63730459	63730258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63730300_63730500
WTC11_00057820	chr20	-	5233	5	FSM	ENSG00000130584.12	ENST00000245663.9	5231	5	0	-2	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.66025403784439	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTCCTGCGTCTCAG	-63830275	True	NA	-7	True	AATAAA	-22	NA	63831264	63743667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63747302_63752685_63752862_63775677_63775963_63789820_63790791_63831096
WTC11_00057821	chr20	-	1853	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	-15	0	15	multi-exon	FALSE	canonical	3	119	junction_14	154.899243091127	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAGAGGTGTCCTG	-63953829	True	NA	NA	False	AATAAA	-36	NA	63956416	63939813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
WTC11_00057822	chr20	-	1845	13	FSM	ENSG00000198276.16	ENST00000358711.7	1845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	170.301611527574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	-63953798	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
WTC11_00057827	chr20	-	6095	18	NNC	ENSG00000196700.9	novel	5982	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_16	15.0056506081213	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTGTGCGGCTCAGT	-63968736	True	NA	-5	True	AATAAA	-21	NA	63969930	63956703	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63960140_63961308_63961408_63961941_63962005_63962272_63962375_63962586_63962782_63963094_63963266_63963341_63963441_63963617_63963711_63963788_63963914_63964070_63964218_63964319_63964392_63964489_63964717_63966140_63966782_63966875_63967005_63967380_63967524_63967829_63967953_63969128_63969242_63969813
WTC11_00057828	chr20	-	2182	5	FSM	ENSG00000130590.14	ENST00000369886.8	2178	5	-3	-1	-3	1	multi-exon	FALSE	canonical	3	10	junction_4	7.42882897905181	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGGTGCTGGGTCTGCG	-63979519	True	NA	-5	True	AATAAA	-16	NA	63979645	63974114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979376
WTC11_00057829	chr20	-	1913	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	-293	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_5	26.8432486856565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTCATTTTTGTCCA	-64078666	True	NA	0	True	TTTAAA	-7	NA	64079811	64073179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
WTC11_00057830	chr20	-	1511	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	-1	0	1	multi-exon	FALSE	canonical	3	38	junction_5	27.9899982136477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTCATTTTTGTCCA	-64079906	False	82	0	True	TTTAAA	-7	NA	64079988	64073179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
WTC11_00057832	chr20	-	655	2	FSM	ENSG00000171695.11	ENST00000308906.6	868	2	217	-4	217	0	multi-exon	TRUE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGCTGGTCTTTTTGCT	-64084060	True	NA	-1	True	CATAAA	-17	NA	64084142	64083375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64083706_64083817
WTC11_00057833	chr20	-	567	3	FSM	ENSG00000171695.11	ENST00000302096.5	823	3	256	0	217	0	multi-exon	FALSE	canonical	2	6	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGCTGGTCTTTTTGCT	-64084060	True	NA	-1	True	CATAAA	-17	NA	64084142	64083375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64083495_64083582_64083706_64083817
WTC11_00057834	chr20	+	270	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCCTTGTAGCTTTTA	1900103	False	NA	NA	False	NA	NA	NA	1900117	1900387	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_1900100_1900400
WTC11_00057835	chr20	+	300	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAACTACTCCAGACA	NA	False	NA	NA	False	NA	NA	NA	4015791	4016091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_4015800_4016100
WTC11_00057836	chr20	+	215	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCACATCAGTTATGAGC	NA	False	NA	NA	False	TATAAA	-17	NA	5291670	5291885	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_5291700_5291900
WTC11_00057837	chr20	+	341	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCCTGTAGCATTCCGA	NA	False	NA	NA	False	AATAAA	-32	NA	12341026	12341367	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12341000_12341400
WTC11_00057838	chr20	+	459	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGATGGGATATTGGCAT	NA	False	NA	NA	False	TTTAAA	-8	NA	12342544	12343003	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12342500_12343000
WTC11_00057839	chr20	+	1763	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCTTAGTAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	12690786	12692549	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12690800_12692500
WTC11_00057840	chr20	+	303	1	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTGTTTTAAGAGAG	17998190	False	NA	NA	False	NA	NA	NA	17998200	17998503	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_17998200_17998500
WTC11_00057841	chr20	+	276	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTTTTTTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	34325310	34325586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_34325300_34325600
WTC11_00057842	chr20	+	1101	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTATCAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38076905	38078006	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_38076900_38078000
WTC11_00057843	chr20	+	296	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	49767740	49768036	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_49767700_49768000
WTC11_00057844	chr20	+	327	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTCAGAAAATTTAAAAATC	NA	False	NA	NA	False	NA	NA	NA	53886595	53886922	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_53886600_53886900
WTC11_00057845	chr20	+	1362	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTCCCGCTCCC	62150603	False	NA	NA	False	NA	NA	NA	62150639	62152001	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_62150600_62152000
WTC11_00057846	chr20	+	297	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63001651	63001948	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_63001700_63001900
WTC11_00057851	chr20	+	1343	8	FSM	ENSG00000101361.17	ENST00000467196.5	1320	8	-23	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	322.227388339226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655401	False	NA	14	True	AATAAA	-16	NA	2655412	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
WTC11_00057852	chr20	+	1628	6	FSM	ENSG00000101361.17	ENST00000415272.2	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_5	292.705722526909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	2655601	False	NA	-20	True	NA	NA	NA	2655615	2658359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372
WTC11_00057860	chr20	+	3096	16	FSM	ENSG00000101224.18	ENST00000439880.6	3096	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.8521879927875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795762	False	NA	30	True	AATAAA	-21	NA	3796290	3806115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797663_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
WTC11_00057862	chr20	+	1618	7	NIC	ENSG00000125779.24	novel	1763	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	152.336250883804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3889604	True	NA	-25	True	NA	NA	NA	3889817	3923855	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3889933_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
WTC11_00057865	chr20	+	3582	18	FSM	ENSG00000125885.13	ENST00000378883.5	3574	18	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_11	15.4187231709196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTAATAATAGGTCTC	5950208	True	NA	NA	False	CATAAA	-45	NA	5950643	5995206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
WTC11_00057869	chr20	+	6536	30	NIC	ENSG00000182621.18	novel	6576	30	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_29	9.24729609868431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAACACAACCCAGCGGT	8600265	True	NA	3	True	AATAAA	-5	NA	8600690	8884889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8657183_8657285_8658537_8658705_8684931_8685079_8697625_8697784_8708669_8708753_8716263_8716349_8717670_8717849_8722353_8722422_8724655_8724753_8727308_8727394_8729049_8729175_8733237_8733393_8737027_8737193_8739260_8739361_8740343_8740449_8741463_8741574_8757045_8757179_8760406_8760461_8765138_8765359_8774538_8774720_8788448_8788526_8788632_8788723_8789517_8789576_8790174_8790262_8881621
WTC11_00057885	chr20	+	3915	2	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACATACTGCATGATTC	13357997	True	NA	49	True	NA	NA	NA	13358028	13362691	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_13358479_13359226
WTC11_00057887	chr20	+	1190	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	43.9592222763381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783481	True	NA	14	True	AATAAA	-18	NA	13785052	13817228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
WTC11_00057894	chr20	+	1604	6	FSM	ENSG00000173418.12	ENST00000398602.2	1604	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	271.022803468638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	20010184	True	NA	58	True	AATACA	-43	NA	20017389	20033655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20018042_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
WTC11_00057897	chr20	+	788	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-27986	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	51.1572206486024	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190162	True	NA	NA	False	AATAAA	-20	NA	21190472	21246622	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
WTC11_00057900	chr20	+	2041	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	212	-11	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	7.11805216802087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGAATAGCTGTCG	24469461	True	NA	34	True	NA	NA	NA	24469840	24666605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
WTC11_00057911	chr20	+	2543	6	ISM	ENSG00000101331.17	ENST00000452892.3	2599	10	8078	0	8066	0	3prime_fragment	FALSE	canonical	3	30	junction_4	10.403845442912	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	32018165	False	NA	15	True	AATAAA	-23	NA	32018515	32032180	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
WTC11_00057919	chr20	+	1152	3	NNC	ENSG00000078699.22	novel	7344	11	NA	NA	0	-92002	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACTGGTTTTTATGTG	33486161	True	NA	4	True	AATAAA	-16	NA	33490095	33526544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_33490302_33524599_33524674_33525672
WTC11_00057944	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	939.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	35681973	True	NA	14	True	AATAAA	-15	NA	35699441	35700978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699457_35699632_35699764_35700774
WTC11_00057945	chr20	+	505	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	-9	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681973	True	NA	16	True	AATAAA	-17	NA	35699441	35700980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699764_35700797
WTC11_00057950	chr20	+	4283	18	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-154	1031	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	22.2363834155837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTATTTACTGATTACC	36154543	False	NA	-3	True	AATAAA	-9	NA	36154585	36231374	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00057951	chr20	+	5724	19	NIC	ENSG00000088367.23	novel	8418	25	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	26.287407209114	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGCACCTCTCCTC	36153177	True	NA	27	True	AATAAA	-22	NA	36154650	36232799	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00057954	chr20	+	2690	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	-1	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	111.613420140929	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232929	True	NA	29	True	ATTAAA	-19	NA	36236483	36256933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
WTC11_00057957	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	541.632947668437	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	36572882	True	NA	3	True	ATTAAA	-8	NA	36574552	36612384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
WTC11_00057958	chr20	+	907	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	-11	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	596.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594731	True	NA	36	True	AATAAA	-20	NA	36605810	36612557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36612009
WTC11_00057970	chr20	+	1219	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	14	1	-2	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0489242485845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445754	True	NA	14	True	AATAAA	-14	NA	38446685	38450921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
WTC11_00057971	chr20	+	1229	6	FSM	ENSG00000174365.21	ENST00000656824.1	1229	6	-2	2	-2	0	multi-exon	FALSE	canonical	2	4	junction_2	24.8145118831703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445754	True	NA	14	True	AATAAA	-14	NA	38446685	38450921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38446949_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
WTC11_00057993	chr20	+	3027	3	ISM	ENSG00000185513.17	ENST00000648715.1	7254	17	25680	-11	0	-2	3prime_fragment	FALSE	canonical	3	22	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGAGTCTGTTTCTAT	NA	False	NA	16	True	AATAAA	-18	NA	43540150	43550952	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_43540309_43540752_43540816_43548146
WTC11_00058000	chr20	+	1475	2	NNC	ENSG00000223891.7	novel	1482	2	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210454	True	NA	15	True	AATAAA	-32	NA	44211106	44226027	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_44211375_44224820
WTC11_00058001	chr20	+	1020	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	-44	-96	18	96	multi-exon	FALSE	canonical	0	0	junction_2	13.5922772190682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTCTGTGCTGTGTGA	44246500	True	NA	18	True	AATACA	-37	NA	44247275	44279331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
WTC11_00058004	chr20	+	1858	13	NIC	ENSG00000101104.13	novel	1910	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	23.2670188607537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907064	True	NA	14	True	ATTAAA	-17	NA	44910064	44939316	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00058006	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.0523711806916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907123	True	NA	11	True	ATTAAA	-14	NA	44910123	44939313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00058022	chr20	+	713	3	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	5070	0	5070	0	3prime_fragment	FALSE	canonical	3	70	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46013634	True	NA	21	True	AATAAA	-21	NA	46013977	46016561	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_46014275_46014370_46014475_46016249
WTC11_00058032	chr20	+	765	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	-4	3	-4	1	multi-exon	FALSE	canonical	2	4	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTCCCTTCATTTCA	50172376	True	NA	NA	False	AATAAA	-18	NA	50172511	50176673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50172789_50172922_50173018_50176280
WTC11_00058046	chr20	+	1407	12	FSM	ENSG00000087460.29	ENST00000488546.6	1407	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.66640211513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	NA	False	NA	19	True	AATAAA	-21	NA	58888778	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58888819_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058047	chr20	+	1564	12	FSM	ENSG00000087460.29	ENST00000478585.6	1548	12	-16	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2228.86952037192	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881089	True	NA	6	True	AATAAA	-45	NA	58889143	58911179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058048	chr20	+	1672	13	FSM	ENSG00000087460.29	ENST00000469431.6	1665	13	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881089	True	NA	19	True	AATAAA	-21	NA	58889143	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889407_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058049	chr20	+	1479	13	FSM	ENSG00000087460.29	ENST00000464788.6	1476	13	-3	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1976.72300896374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881089	True	NA	19	True	AATAAA	-21	NA	58889143	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889214_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058050	chr20	+	1857	13	FSM	ENSG00000087460.29	ENST00000354359.12	1857	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1962.84589308483	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58883812	True	NA	19	True	AATAAA	-21	NA	58891420	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058051	chr20	+	1522	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	116	0	19	0	multi-exon	FALSE	canonical	3	63	junction_1	1971.60925529263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892066	False	NA	19	True	AATAAA	-21	NA	58892096	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058052	chr20	+	1480	12	FSM	ENSG00000087460.29	ENST00000492907.6	1499	12	19	0	19	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2310.85537452768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892066	False	NA	19	True	AATAAA	-21	NA	58892096	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892210_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058053	chr20	+	1601	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	-18	0	-18	0	multi-exon	FALSE	canonical	3	22	junction_1	1980.00153444104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892284	False	NA	19	True	AATAAA	-21	NA	58892314	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058054	chr20	+	3875	11	FSM	ENSG00000087460.29	ENST00000682829.1	3870	11	-5	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_1	1481.9342934152	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	58893080	False	NA	13	True	AATAAA	-15	NA	58893094	58911186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058055	chr20	+	2570	11	FSM	ENSG00000087460.29	ENST00000496934.5	2837	11	267	0	267	0	multi-exon	FALSE	canonical	3	2527	junction_1	1077.90767693713	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58897693	False	NA	19	True	AATAAA	-21	NA	58897706	58911192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
WTC11_00058063	chr20	+	4565	12	NIC	ENSG00000101187.16	novel	2716	12	NA	NA	-50	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_11	37.0489959266584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639758	True	NA	15	True	AATATA	-19	NA	62642452	62672293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62669950
WTC11_00058068	chr20	+	3070	14	NIC	ENSG00000101199.13	novel	3467	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	133	junction_13	74.7942345023525	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	63265283	True	NA	16	True	AATAAA	-16	NA	63272809	63289788	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563_63289497_63289677
WTC11_00058072	chr20	+	4652	34	NNC	ENSG00000258366.11	novel	4615	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	48.8387086991588	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGGTGTCTTCGTGGC	63656282	True	NA	6	True	AATAAA	-16	NA	63658312	63696243	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_63658467_63659232_63659505_63661297_63661497_63661761_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678068_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
WTC11_00058074	chr20	+	3805	10	NIC	ENSG00000273154.3	novel	3119	11	NA	NA	134	0	intron_retention	FALSE	canonical	3	16	junction_7	98.8612945270066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63708970	False	NA	8	True	AATAAA	-23	NA	63708997	63739103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780_63737648_63737820_63737903_63738007_63738061_63738182_63738500_63738597
WTC11_00058083	chr20	-	1235	7	ISM	ENSG00000196476.12	ENST00000382369.9	1420	9	10994	0	10994	0	3prime_fragment	FALSE	canonical	3	108	junction_2	54.594464513864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-278864	True	NA	-13	True	AATAAA	-18	NA	279435	270862	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171
WTC11_00058084	chr20	-	1401	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	10	0	10	0	multi-exon	FALSE	canonical	3	16	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	-324732	True	NA	-2	True	NA	NA	NA	325259	319686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_320782_322377_322566_325141
WTC11_00058087	chr20	-	3104	5	FSM	ENSG00000101276.18	ENST00000488495.3	3106	5	18	-16	18	2	multi-exon	FALSE	canonical	2	13	junction_4	15.2807067899361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATCTTCCTTCAAAGG	-768111	False	NA	-5	True	AATAAA	-20	NA	768482	760077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_761239_761700_761825_763497_764004_765207_766335_768296
WTC11_00058093	chr20	-	2725	10	NNC	ENSG00000088833.18	novel	2800	10	NA	NA	0	37427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	320.15760007985	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAGGGTAGGGCCCTCA	-1455270	True	NA	NA	False	AAAAAG	-4	NA	1466832	1404734	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_1404760_1442169_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
WTC11_00058100	chr20	-	4024	4	NIC	ENSG00000088899.16	novel	4196	5	NA	NA	-52	0	intron_retention	FALSE	canonical	3	16	junction_3	104.59551721858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172545	True	NA	-3	True	AATAAA	-25	NA	3173601	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_3165153_3165496_3166361_3166704_3167182_3173454
WTC11_00058101	chr20	-	4072	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	85.5084060195254	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172493	True	NA	-3	True	AATAAA	-25	NA	3173549	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165559_3166361_3166704_3167182_3167798_3167962_3173454
WTC11_00058102	chr20	-	2937	19	FSM	ENSG00000088836.14	ENST00000647296.1	2915	19	0	-22	0	0	multi-exon	FALSE	canonical	0	0	junction_9	35.6670560726406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	-3238259	True	NA	-5	True	AATAAA	-22	NA	3239190	3227416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
WTC11_00058103	chr20	-	3133	20	NIC	ENSG00000088836.14	novel	3046	20	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_19	33.3994542725831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGCCACCTGTGTCCC	-3238229	True	NA	-8	True	AATAAA	-19	NA	3239160	3227419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3238979
WTC11_00058104	chr20	-	3151	20	NIC	ENSG00000088836.14	novel	3229	20	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_19	33.7349946123583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGCCACCTGTGTCC	-3239530	False	NA	-9	True	AATAAA	-18	NA	3239547	3227420	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239347
WTC11_00058108	chr20	-	5452	12	NNC	ENSG00000101265.16	novel	5390	12	NA	NA	179	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.7946533478948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCCCGTGGATGGGTC	-4823419	False	NA	-12	True	AATAAA	-16	NA	4823429	4780023	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823314
WTC11_00058110	chr20	-	6602	14	NIC	ENSG00000089057.15	novel	6953	17	NA	NA	5	0	combination_of_known_splicesites	TRUE	canonical	2	2	junction_8	16.1347872916486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCTTCACGTGCCT	-4999576	True	NA	-3	True	AATAAA	-17	NA	5001505	4852357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970916_5001405
WTC11_00058112	chr20	-	2293	11	NNC	ENSG00000089195.15	novel	2929	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	94.2613918844826	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCCCTCTATGGTCTT	-5946208	True	NA	-11	True	ATTAAA	-14	NA	5950515	5937839	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942031_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
WTC11_00058137	chr20	-	2398	10	NNC	ENSG00000101474.12	novel	2202	9	NA	NA	0	-19	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	272.412450541227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGCTGATTAACCTTTT	-24983191	True	NA	-20	True	AATAAA	-15	NA	24992751	24962943	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_24964023_24964374_24964590_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
WTC11_00058151	chr20	-	2373	3	FSM	ENSG00000171552.14	ENST00000677194.1	2373	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721058	False	2800	NA	False	AATAAA	-14	NA	31722549	31664462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31722476
WTC11_00058154	chr20	-	2949	9	FSM	ENSG00000125967.17	ENST00000606525.5	2010	9	-938	-1	3	0	multi-exon	TRUE	canonical	2	15	junction_8	23.8009322296418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33663364	True	NA	-4	True	AATAAA	-18	NA	33663716	33657086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33662211
WTC11_00058155	chr20	-	1833	14	NNC	ENSG00000125967.17	novel	1942	13	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	3	48	junction_12	16.1681255568996	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTCCTGTCTCGCAG	-33673024	True	NA	-3	True	AATAAA	-19	NA	33674388	33657085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_33657517_33657551_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
WTC11_00058165	chr20	-	2258	12	NIC	ENSG00000100983.12	novel	2131	13	NA	NA	-37	0	intron_retention	FALSE	canonical	3	181	junction_11	21.7605298914577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCAGCCCCTCATCAG	NA	False	NA	NA	False	NA	NA	NA	34955845	34928570	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
WTC11_00058168	chr20	-	1925	12	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	8	-2	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	62.8545480842559	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	-35145636	True	NA	-2	True	AATAAA	-17	NA	35147328	35115365	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134104_35134156_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
WTC11_00058179	chr20	-	2753	17	NIC	ENSG00000131051.24	novel	2792	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	426.1112998311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	-35711493	True	NA	-6	True	AATAAA	-17	NA	35742238	35703610	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729363_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
WTC11_00058182	chr20	-	840	3	FSM	ENSG00000131051.24	ENST00000426951.5	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	1128	junction_2	159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTGAAGATTAGATCA	-35710092	False	NA	94	True	AATAAA	-19	NA	35740837	35731359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35732136_35738967_35739018_35740823
WTC11_00058185	chr20	-	4371	10	ISM	ENSG00000149636.16	ENST00000373750.9	2181	11	-7	5	0	-5	intron_retention	FALSE	canonical	3	198	junction_9	30.5432298372142	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATCTATGTTTTGAGTG	-36770049	True	NA	-8	True	ATTAAA	-14	NA	36773770	36751799	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424
WTC11_00058187	chr20	-	4702	16	FSM	ENSG00000101347.11	ENST00000645033.1	4680	16	0	-22	0	0	multi-exon	FALSE	canonical	3	5	junction_9	44.7298061202545	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	-36947720	True	NA	-28	True	AATAAA	-15	NA	36951714	36890228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917097_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
WTC11_00058191	chr20	-	2155	3	FSM	ENSG00000166619.15	ENST00000414542.6	2205	3	50	0	-3	0	multi-exon	FALSE	canonical	3	16	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGTTTTATGTGGC	-37518961	True	NA	-13	True	AATAAA	-15	NA	37527881	37517417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37521318_37521452_37527792
WTC11_00058195	chr20	-	1724	7	FSM	ENSG00000196756.14	ENST00000662982.2	1728	7	4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	86.3566570810972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGATGGCACCACTGC	-38431143	True	NA	NA	False	NA	NA	NA	38435377	38419808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435196
WTC11_00058196	chr20	-	1445	4	FSM	ENSG00000196756.14	ENST00000671309.1	1432	4	0	-13	0	0	multi-exon	FALSE	canonical	3	30	junction_2	92.6366857975584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAACCTGTGAGCC	-38423055	False	NA	-5	True	AATAAA	-32	NA	38427289	38420574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418
WTC11_00058208	chr20	-	764	5	FSM	ENSG00000101473.17	ENST00000486165.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	194.561044405092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTACCCCATGGATG	-45850125	True	NA	NA	False	GGGGCT	-7	NA	45857371	45844262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45844421_45848449_45848676_45853922_45853985_45855158_45855293_45857187
WTC11_00058214	chr20	-	1964	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	0	-204	intron_retention	FALSE	canonical	3	23	junction_8	78.6936551319399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGGAGACCTTAC	-46360372	True	NA	-18	True	AATAAA	-18	NA	46364390	46349733	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
WTC11_00058221	chr20	-	5229	22	NIC	ENSG00000101040.20	novel	5273	23	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_21	108.2732329365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47318749	True	NA	-1	True	ATTAAA	-18	NA	47319087	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47318950
WTC11_00058222	chr20	-	5204	23	NIC	ENSG00000101040.20	novel	5281	23	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_22	99.9129062883029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47355250	True	NA	-1	True	ATTAAA	-18	NA	47356697	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47356656
WTC11_00058223	chr20	-	4937	21	NIC	ENSG00000101040.20	novel	4991	22	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	110.646961096995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47355272	True	NA	-1	True	ATTAAA	-18	NA	47356719	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47356656
WTC11_00058224	chr20	-	5242	22	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12240	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_7	94.6982557241062	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47361267	True	NA	-1	True	ATTAAA	-18	NA	47369129	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
WTC11_00058225	chr20	-	5267	23	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12256	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_8	83.3426661440585	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47361283	True	NA	-1	True	ATTAAA	-18	NA	47369145	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
WTC11_00058227	chr20	-	5225	22	NNC	ENSG00000101040.20	novel	5511	24	NA	NA	-12298	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_7	90.801195712706	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47361325	True	NA	-1	True	ATTAAA	-18	NA	47369187	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
WTC11_00058228	chr20	-	5251	22	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12311	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_21	107.743922494344	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-47361338	True	NA	-1	True	ATTAAA	-18	NA	47369200	47209213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47369041
WTC11_00058252	chr20	-	2233	11	NIC	ENSG00000087586.18	novel	2145	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_10	398.403074787331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378394	True	NA	-17	True	AATAAA	-15	NA	56392193	56369389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392153
WTC11_00058253	chr20	-	2231	11	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	388.918294761252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378406	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392167
WTC11_00058254	chr20	-	2098	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	-352	0	-53	0	multi-exon	FALSE	canonical	3	6	junction_3	62.9933329805623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	-57266665	True	NA	-74	True	NA	NA	NA	57266694	57170530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
WTC11_00058257	chr20	-	4624	4	FSM	ENSG00000124225.16	ENST00000265626.8	4627	4	0	3	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	90.8074886779719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCTTTTTCACTTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	57711536	57648396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57711323
WTC11_00058259	chr20	-	1259	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-26	1310	-13	0	5prime_fragment	FALSE	canonical	3	29	junction_8	7.95298686029343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-58308624	True	NA	NA	False	ATTAAA	-15	NA	58309465	58247055	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
WTC11_00058260	chr20	-	1086	4	NNC	ENSG00000235590.8	novel	1156	5	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	15.369522511198	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCTACTGTGGATTCT	-58848485	True	NA	-3	True	AATAAA	-36	NA	58850882	58818915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_58819256_58841936_58842217_58842432_58842546_58850529
WTC11_00058264	chr20	-	1332	5	FSM	ENSG00000101160.15	ENST00000680206.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.03112887414927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	-59005886	True	NA	-5	True	AATAAA	-21	NA	59007247	58995184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58997602_58997754_59001464_59001645_59006321_59006486_59006985
WTC11_00058265	chr20	-	3198	4	FSM	ENSG00000101160.15	ENST00000488395.2	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	-59005909	True	NA	-5	True	AATAAA	-21	NA	59007270	58995184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58997754_59001464_59001645_59006321_59006486_59006985
WTC11_00058270	chr20	-	5624	30	NNC	ENSG00000130702.15	novel	11426	80	NA	NA	-1231	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_29	121.000122836781	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCATTTTTAATTGTGAG	-62320308	False	NA	-11	True	AATAAA	-33	NA	62320343	62309144	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319570_62319683
WTC11_00058271	chr20	-	3147	18	NIC	ENSG00000130702.15	novel	11426	80	NA	NA	79	-2	intron_retention	FALSE	canonical	3	12	junction_14	125.290278869666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCATTTTTAATTGTG	-62314770	False	NA	-13	True	AATAAA	-31	NA	62314800	62309146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62313087_62313251_62313326_62313461_62313648_62313803_62314303
WTC11_00058272	chr20	-	7251	39	ISM	ENSG00000130702.15	ENST00000252999.7	11426	80	41255	82	574	-2	intron_retention	FALSE	canonical	3	102	junction_35	141.245569636107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCATTTTTAATTGTG	-62326037	False	NA	-13	True	AATAAA	-31	NA	62326057	62309146	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319014_62319683_62319796_62320558_62320670_62320738_62320891_62322018_62322169_62322268_62322450_62322657_62322759_62323455_62323671_62323775_62323857_62324079_62324205_62324440
WTC11_00058280	chr20	-	872	5	FSM	ENSG00000101198.15	ENST00000486495.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	31.1478329904345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTAGCAGAGGTCCT	-63253415	False	NA	NA	False	NA	NA	NA	63253437	63243849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
WTC11_00058283	chr20	-	1045	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	157.240878519395	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAAGGTGTGATTGG	-63941541	False	NA	NA	False	AATAAA	-12	NA	63941565	63939837	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
WTC11_00058285	chr20	-	1782	14	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	169.968601346799	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGGTGTGATTGGTTAC	-63953798	True	NA	NA	False	AATAAA	-16	NA	63956385	63939833	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946641_63956259
WTC11_00058300	chr20	+	875	3	FSM	ENSG00000101361.17	ENST00000462630.5	859	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	975	junction_1	87.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656600	False	NA	14	True	AATAAA	-16	NA	2656623	2658393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656896_2657080_2657219_2657928
WTC11_00058306	chr20	+	2296	8	FSM	ENSG00000088826.18	ENST00000621355.4	2322	8	7	19	7	0	multi-exon	FALSE	canonical	2	4	junction_7	27.5266105017361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148212	True	NA	22	True	AATAAA	-25	NA	4148785	4187727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4186742_4186833_4187269
WTC11_00058324	chr20	+	2778	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	15	0	intron_retention	FALSE	canonical	3	444	junction_1	52.1685303181483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963952	False	NA	NA	False	AATAAA	-22	NA	17969129	17991122	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_17970371_17975683_17975904_17988165_17988299_17989938
WTC11_00058329	chr20	+	629	3	FSM	ENSG00000132664.12	ENST00000475192.1	426	3	-55	-148	-13	148	multi-exon	FALSE	canonical	3	111	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATGCTATCCATTCTG	18465620	True	NA	NA	False	NA	NA	NA	18467375	18473159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18467569_18468943_18469062_18472841
WTC11_00058334	chr20	+	730	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-27982	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	57.1057022064329	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190166	True	NA	NA	False	AATAAA	-20	NA	21190476	21246622	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_21190545_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
WTC11_00058336	chr20	+	2627	14	NIC	ENSG00000197586.13	novel	4104	15	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	86.0066049479606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	25190657	True	NA	13	True	AATAAA	-14	NA	25195725	25226714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00058337	chr20	+	2203	12	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	2	-15	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	89.9940310233668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	25190690	True	NA	13	True	AATAAA	-14	NA	25195758	25226714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
WTC11_00058354	chr20	+	4216	12	NIC	ENSG00000078699.22	novel	7617	12	NA	NA	65	216	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	48.6056827613214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTCTAACCAAGCATTT	33486247	True	NA	NA	False	ATTAAA	-18	NA	33490181	33646906	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33623772_33623855_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
WTC11_00058368	chr20	+	3496	20	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-131	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_14	31.6297836428958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACATTCTAAAATTAT	36153135	True	NA	11	True	AATAAA	-19	NA	36154608	36230335	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214356_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00058369	chr20	+	3299	19	NNC	ENSG00000088367.23	novel	8418	25	NA	NA	-131	-6	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_10	30.1464020333365	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACATTCTAAAATTAT	36153135	True	NA	11	True	AATAAA	-19	NA	36154608	36230335	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194214_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
WTC11_00058373	chr20	+	949	7	NNC	ENSG00000197122.13	novel	1083	6	NA	NA	39	-162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	25.2504125378841	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTTGTGTCTGCTT	37345438	False	NA	NA	False	NA	NA	NA	37346178	37387639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37386410_37386478_37387430
WTC11_00058374	chr20	+	302	3	FSM	ENSG00000197122.13	ENST00000472968.1	461	3	0	159	0	-159	multi-exon	FALSE	canonical	3	55	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCGTCGTCCCTGGAC	37384309	False	NA	NA	False	NA	NA	NA	37384322	37394015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37384404_37386074_37386175_37393894
WTC11_00058380	chr20	+	2347	21	FSM	ENSG00000101452.15	ENST00000373323.8	2347	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.1418992306163	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGCTCTATGGGAAACA	38960117	True	NA	NA	False	NA	NA	NA	38962343	39038847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38962408_38969080_38969215_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
WTC11_00058385	chr20	+	7256	17	FSM	ENSG00000185513.17	ENST00000648715.1	7254	17	-2	0	0	0	multi-exon	TRUE	canonical	2	22	junction_16	15.5149877134982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGATACGCAGCCAGAG	43513460	True	NA	5	True	AATAAA	-7	NA	43514468	43550941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43548146
WTC11_00058394	chr20	+	2697	14	NIC	ENSG00000101104.13	novel	1910	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	35	junction_8	18.5465989162689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907066	True	NA	11	True	ATTAAA	-14	NA	44910066	44939313	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44932341_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
WTC11_00058398	chr20	+	2016	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	21	0	1	0	multi-exon	FALSE	canonical	2	8	junction_2	164.178439510187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	45408053	True	NA	18	True	AATAAA	-20	NA	45416127	45426244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
WTC11_00058401	chr20	+	1437	11	ISM	ENSG00000124155.19	ENST00000640549.2	1992	14	3200	0	-594	0	3prime_fragment	TRUE	canonical	1	1	junction_10	249.90470183652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGCCTAATGTCTTAT	45419289	True	NA	NA	False	NA	NA	NA	45419311	45431284	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45427421_45427546_45429444_45429671_45431171
WTC11_00058402	chr20	+	587	4	FSM	ENSG00000124104.19	ENST00000614929.4	587	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.6690139681023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTCCTGCCTCAGCC	45833086	True	NA	NA	False	NA	NA	NA	45833830	45838318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45838267
WTC11_00058403	chr20	+	771	4	FSM	ENSG00000124104.19	ENST00000372541.1	771	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.9131825880731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGCCGGAGCTGCGGC	45832986	True	NA	NA	False	NA	NA	NA	45834135	45840907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45834469_45834958_45835117_45840447_45840459_45840638
WTC11_00058409	chr20	+	1394	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	-572	0	39	multi-exon	FALSE	canonical	1	7	junction_4	50.4688224631438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCGAAGAGTGGTGACGT	46116541	True	NA	58	True	NA	NA	NA	46118347	46129698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
WTC11_00058425	chr20	+	3140	3	FSM	ENSG00000101146.13	ENST00000462438.1	3251	3	111	0	111	0	multi-exon	FALSE	canonical	3	462	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTCCTTTTCTC	NA	False	NA	44	True	AATAAA	-24	NA	57371244	57378463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57373739_57374606_57374802_57378012
WTC11_00058431	chr20	+	5575	13	NIC	ENSG00000215440.12	novel	4633	12	NA	NA	-1428	0	intron_retention	FALSE	canonical	3	100	junction_2	121.619511409788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCGAGTCCTTGCCTCA	NA	False	NA	22	True	AGTAAA	-18	NA	58691371	58719231	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58691563_58691723_58691781_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
WTC11_00058432	chr20	+	3432	13	NIC	ENSG00000215440.12	novel	2191	12	NA	NA	-1402	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	96.8301419439675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	NA	False	NA	20	True	ATTAAA	-22	NA	58691397	58715844	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58691563_58691723_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
WTC11_00058433	chr20	+	1759	13	NNC	ENSG00000215440.12	novel	2191	12	NA	NA	145	-5	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_12	121.697798528431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGGCCTCGTTCTT	58692932	False	NA	15	True	ATTAAA	-17	NA	58692944	58715839	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167_58715270_58715551
WTC11_00058436	chr20	+	590	2	FSM	ENSG00000101181.18	ENST00000488748.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	16	True	CATAAA	-19	NA	62202738	62203568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62202844_62203083
WTC11_00058441	chr20	+	2434	31	NIC	ENSG00000092758.18	novel	2497	32	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.3954768291156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	62812161	True	NA	16	True	AATAAA	-32	NA	62817076	62841159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62817143_62817566_62817636_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
WTC11_00058449	chr20	+	1906	7	NIC	ENSG00000197114.12	novel	1890	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	97.3454615731462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705475	True	NA	20	True	ATTAAA	-20	NA	63708104	63736141	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733776_63734704_63734825_63735158_63735565_63735780
WTC11_00058451	chr20	+	266	2	FSM	ENSG00000229299.2	ENST00000433905.2	266	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTCTGACTACTTA	63745531	False	NA	11	True	NA	NA	NA	63745545	63745958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63745676_63745822
WTC11_00058452	chr20	+	3847	6	NIC	ENSG00000101150.18	novel	2275	7	NA	NA	-4	-13	intron_retention	FALSE	canonical	3	29	junction_4	309.596899209278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGGGAAAGTCCGCC	63857615	True	NA	16	True	AATAAA	-6	NA	63865285	63891525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63889239_63889849
WTC11_00058464	chr20	-	1413	3	FSM	ENSG00000125895.6	ENST00000429036.2	1876	3	463	0	-45	0	multi-exon	FALSE	canonical	2	2	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGAGGATGAGGTTT	-1184431	False	NA	-8	True	AATACA	-18	NA	1184518	1180569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1181588_1183770_1183949_1184301
WTC11_00058468	chr20	-	6104	6	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1924	19519	intron_retention	FALSE	non_canonical	0	0	junction_1	105.719250848651	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGATTAACCTGCTA	-3169429	False	NA	NA	False	NA	NA	NA	3170485	3143097	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3143124_3162627_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3168497
WTC11_00058470	chr20	-	6309	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1924	0	intron_retention	FALSE	canonical	3	44	junction_3	84.574753259403	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3169429	False	NA	-3	True	AATAAA	-25	NA	3170485	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165559_3166361_3166704_3167182_3167990
WTC11_00058471	chr20	-	6448	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1924	0	intron_retention	FALSE	canonical	0	0	junction_3	116.424600063732	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3169429	False	NA	-3	True	AATAAA	-25	NA	3170485	3162616	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3168077
WTC11_00058487	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	394.695839293443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-10420270	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
WTC11_00058499	chr20	-	3295	20	FSM	ENSG00000089091.16	ENST00000377630.9	3295	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	13.2635755991034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-18466466	True	NA	2	True	AATAAA	-21	NA	18467030	18383366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
WTC11_00058519	chr20	-	2138	8	NNC	ENSG00000101400.6	novel	2211	8	NA	NA	72	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	12.7439461418081	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGCCTTGGCCT	-33443339	True	NA	1	True	AATAAA	-37	NA	33443691	33407954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_33408597_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
WTC11_00058529	chr20	-	4292	12	NIC	ENSG00000131067.17	novel	2638	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	75	junction_2	12.0830459735946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-34869271	True	NA	-6	True	ATTAAA	-18	NA	34872847	34844719	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34861563_34862813_34862966_34863312_34863549_34872646
WTC11_00058542	chr20	-	1738	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	-716	0	-63	multi-exon	FALSE	canonical	3	30	junction_2	73.1355286817259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTACTCAGGAGGCTGA	-38431143	True	NA	NA	False	NA	NA	NA	38435377	38419871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
WTC11_00058554	chr20	-	1539	2	FSM	ENSG00000080189.15	ENST00000493599.1	2510	2	971	0	971	0	multi-exon	FALSE	canonical	3	276	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	-46352211	False	NA	NA	False	ATTAAA	-24	NA	46352226	46349527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350891_46352050
WTC11_00058558	chr20	-	3630	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	19	5	combination_of_known_junctions	FALSE	canonical	2	2	junction_15	58.9946767266858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGTTAACAGCTGTTT	-46404432	True	NA	0	True	AATAAA	-24	NA	46406580	46366044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387432_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
WTC11_00058559	chr20	-	3362	19	NIC	ENSG00000062598.18	novel	3574	21	NA	NA	16	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	74.4674093931593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGTTAACAGCTGTTT	-46404435	True	NA	0	True	AATAAA	-24	NA	46406583	46366044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46389038_46389221_46393092_46393144_46394048_46394090_46394404_46394504_46406547
WTC11_00058569	chr20	-	5543	24	FSM	ENSG00000101040.20	ENST00000355972.8	5542	24	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_23	129.583088933773	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTCCTCGAATTTGC	-47356855	False	NA	0	True	ATTAAA	-19	NA	47356889	47209212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47355449_47355521_47356656
WTC11_00058570	chr20	-	4214	20	NIC	ENSG00000101040.20	novel	3729	21	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	121.059038732041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	-47355237	True	NA	-3	True	ATTAAA	-16	NA	47356684	47209215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47356656
WTC11_00058571	chr20	-	4970	22	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12240	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	99.2498393562675	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	-47361267	True	NA	-3	True	ATTAAA	-16	NA	47369129	47209215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
WTC11_00058572	chr20	-	4969	22	NNC	ENSG00000101040.20	novel	5090	22	NA	NA	-12266	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	101.982480377047	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	-47361293	True	NA	-3	True	ATTAAA	-16	NA	47369155	47209215	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
WTC11_00058577	chr20	-	3562	20	NIC	ENSG00000196562.15	novel	4915	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	41.8481624215561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	-47785784	True	NA	-36	True	AATAAA	-27	NA	47786043	47657667	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
WTC11_00058578	chr20	-	3905	21	FSM	ENSG00000196562.15	ENST00000467815.5	3905	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	59.7945440654915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	-47786457	True	NA	-36	True	AATAAA	-27	NA	47786554	47657667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659722_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47786047
WTC11_00058582	chr20	-	3088	12	NNC	ENSG00000124214.21	novel	3136	12	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_1	306.905913382948	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170858	True	NA	-10	True	AATAAA	-14	NA	49188321	49113522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_49114894_49115783_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49188115
WTC11_00058584	chr20	-	488	2	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-49914248	True	NA	NA	False	AATAAA	-19	NA	49915477	49903390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_49903781_49915379
WTC11_00058585	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	1427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094449	True	NA	-1	True	AATAAA	-25	NA	50113172	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50113106
WTC11_00058586	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50115484
WTC11_00058590	chr20	-	1645	3	FSM	ENSG00000000419.14	ENST00000682366.1	2266	3	621	0	621	0	multi-exon	FALSE	canonical	3	345	junction_2	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTATAAATAAATGTATAT	-50942233	False	NA	10	True	NA	NA	NA	50942248	50934904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50936263_50940864_50940934_50942030
WTC11_00058592	chr20	-	7486	11	FSM	ENSG00000101096.20	ENST00000371564.8	7519	11	35	-2	35	2	multi-exon	TRUE	canonical	0	0	junction_2	3.83275357934736	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTTGGTGTATCTTTC	-51542574	True	NA	-3	True	AATAAA	-17	NA	51542684	51386960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51391452_51398642_51398731_51432066_51432757_51435187_51435315_51435705_51435762_51454547_51454689_51473979_51474153_51475457_51475661_51516783_51516956_51523080_51524111_51542369
WTC11_00058594	chr20	-	5259	5	NNC	ENSG00000101115.13	novel	5209	4	NA	NA	-18	55448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.82658379614	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTGGACGCAGTGGC	-51793926	True	NA	NA	False	AAAAAG	-7	NA	51802539	51726882	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_51726915_51782330_51784685_51788860_51789142_51790021_51792353_51802278
WTC11_00058600	chr20	-	964	5	NNC	ENSG00000235590.8	novel	1156	5	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	15.1410039297267	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCTACTGTGGATTCT	-58848457	True	NA	-3	True	AATAAA	-36	NA	58850854	58818915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_58819256_58841936_58842217_58842432_58842546_58848878_58848918_58850662
WTC11_00058609	chr20	-	3235	6	NNC	ENSG00000149658.18	novel	3198	5	NA	NA	0	51652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.190265187211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGTTTGAAAAGAGCT	-63209709	True	NA	NA	False	AAAAAG	-1	NA	63216139	63143776	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63143806_63195428_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
WTC11_00058610	chr20	-	3436	4	ISM	ENSG00000149658.18	ENST00000370339.8	3198	5	26	0	26	0	intron_retention	FALSE	canonical	3	389	junction_3	10.7082522694727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	-63209675	True	NA	-3	True	AATAAA	-18	NA	63216105	63195428	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576
WTC11_00058614	chr20	-	659	5	FSM	ENSG00000075043.20	ENST00000630274.2	784	5	125	0	125	0	multi-exon	FALSE	canonical	3	760	junction_3	59.0905026209796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAGCAGCACAGGCAGA	-63445438	False	NA	NA	False	NA	NA	NA	63445451	63438688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237
WTC11_00058622	chr21	+	2143	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	12	-1320	2	0	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	5553680	5592003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5553839_5590018
WTC11_00058623	chr21	+	1602	3	FSM	ENSG00000274333.4	ENST00000623050.1	1602	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGATTTTTTTGCCT	NA	False	NA	NA	False	TATAAA	-27	NA	5565962	5591234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5566184_5585822_5585988_5590018
WTC11_00058625	chr21	+	4765	14	FSM	ENSG00000275993.3	ENST00000613488.3	4747	14	-48	30	-48	-30	multi-exon	FALSE	canonical	2	10	junction_3	3.92533871451479	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTTCCCTTCCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	6111082	6123748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6111253_6112069_6112240_6112738_6112856_6116223_6116288_6116461_6116624_6116893_6117019_6117127_6117252_6117803_6118028_6118255_6118403_6118782_6118909_6119023_6119241_6119719_6120002_6120486_6120719_6121143
WTC11_00058626	chr21	+	1049	3	FSM	ENSG00000278903.4	ENST00000692318.1	488	3	67	-628	0	188	multi-exon	FALSE	canonical	3	13	junction_2	23	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCGGGCATAGTG	NA	False	NA	NA	False	AATATA	-4	NA	6318494	6322010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6318605_6320882_6320975_6321163
WTC11_00058627	chr21	+	873	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	-14	0	-11	0	multi-exon	FALSE	canonical	2	5	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	7048905	7085797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7049061_7081048_7081214_7085244
WTC11_00058628	chr21	+	2140	2	NIC	ENSG00000277067.4	novel	859	3	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	7048905	7087229	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_7049061_7085244
WTC11_00058629	chr21	+	2141	2	NIC	ENSG00000276077.4	novel	994	3	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGTCTCAAATTACT	NA	False	NA	NA	False	AATAAA	-13	NA	7430680	7469005	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_7430839_7467022
WTC11_00058631	chr21	+	436	3	FSM	ENSG00000273590.5	ENST00000624304.3	1863	3	432	995	396	-995	multi-exon	FALSE	canonical	2	5	junction_1	89.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCACAGTACCCAAC	NA	False	NA	NA	False	AAAAAG	-11	NA	7745470	7755118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7745651_7748898_7748988_7754951
WTC11_00058632	chr21	+	959	4	NIC	ENSG00000273590.5	novel	1863	3	NA	NA	396	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	82.5604155889626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7745470	7758627	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_7745651_7748898_7748988_7754951_7755119_7758104
WTC11_00058633	chr21	+	2662	1	FSM	ENSG00000275708.1	ENST00000615959.1	180	1	-2048	-434	-2048	434	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCGGGGCTCGGAGCCG	NA	False	NA	NA	False	NA	NA	NA	8206424	8209086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8206400_8209100
WTC11_00058634	chr21	+	733	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGGCCCGCCCGGCCGCGC	NA	False	NA	NA	False	NA	NA	NA	8212724	8213457	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8212700_8213500
WTC11_00058635	chr21	+	234	1	FSM	ENSG00000286057.1	ENST00000652328.1	234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTTGTTTGTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	8238858	8239092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8238900_8239100
WTC11_00058636	chr21	+	2277	1	FSM	ENSG00000286146.1	ENST00000652246.1	329	1	-2011	63	-2011	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATTTCTGGACTTGGA	NA	False	NA	NA	False	NA	NA	NA	8418663	8420940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8418700_8420900
WTC11_00058637	chr21	+	559	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	0	-406	0	406	mono-exon	FALSE	NA	NA	NA	NA	NA	4093	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCGTCGTCGTCGTCGTC	NA	False	NA	NA	False	NA	NA	NA	8439822	8440381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8439800_8440400
WTC11_00058639	chr21	+	456	1	FSM	ENSG00000286032.1	ENST00000651130.1	333	1	-203	80	-203	-80	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTACAGAACTGGCGAGT	NA	False	NA	NA	False	NA	NA	NA	8465050	8465506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8465000_8465500
WTC11_00058640	chr21	+	593	1	FSM	ENSG00000286091.1	ENST00000651001.1	234	1	103	-462	103	462	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTAAAAGCTGGCCA	NA	False	NA	NA	False	NA	NA	NA	8466568	8467161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8466600_8467200
WTC11_00058641	chr21	+	2059	1	FSM	ENSG00000286148.1	ENST00000651888.1	312	1	-1134	-613	-1134	613	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAAAAGCCTGAATCTG	NA	False	NA	NA	False	NA	NA	NA	8467185	8469244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8467200_8469200
WTC11_00058642	chr21	+	2069	1	FSM	ENSG00000264462.1	ENST00000581792.1	180	1	-317	-1572	-317	1572	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCCAGGAAAAGAGTACAA	NA	False	NA	NA	False	TTTAAA	-4	NA	8986681	8988750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8986700_8988800
WTC11_00058644	chr21	+	862	4	FSM	ENSG00000224905.8	ENST00000690295.1	905	4	39	4	33	-4	multi-exon	FALSE	canonical	2	6	junction_3	12.5521135891752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGCCTAAGTACGCTT	14026605	True	NA	NA	False	AATAAA	-14	NA	14027453	14124620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14113338_14113379_14124137
WTC11_00058646	chr21	+	1975	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	-23	3	4	-3	multi-exon	FALSE	canonical	3	13	junction_3	4.54835134966506	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGTAACTGAATTTT	14215744	True	NA	NA	False	AATAAA	-15	NA	14216133	14228369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
WTC11_00058647	chr21	+	4080	24	FSM	ENSG00000155313.16	ENST00000285679.10	3973	24	-107	0	-64	0	multi-exon	TRUE	canonical	3	127	junction_14	25.8085872492743	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTAAGCAGGTATA	15729854	True	NA	17	True	AATAAA	-28	NA	15729917	15878911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_15730439_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
WTC11_00058648	chr21	+	5097	24	NNC	ENSG00000155313.16	novel	5216	25	NA	NA	-30	-346	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	42.3836559432443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTTTGATACAGCG	15729888	False	NA	7	True	AGTAAA	-17	NA	15729951	15879712	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_15730689_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
WTC11_00058649	chr21	+	6023	26	NNC	ENSG00000155313.16	novel	5379	26	NA	NA	-30	11177	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	57.0207541163741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAAGTTATTCAGATA	15729888	False	NA	NA	False	NA	NA	NA	15729951	15891241	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_15730439_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15849776_15849873_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302_15880185_15890633
WTC11_00058653	chr21	+	1083	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	-3	0	0	0	multi-exon	TRUE	canonical	3	179	junction_4	450.09721172209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	17481504	True	NA	NA	False	AATATA	-24	NA	17513042	17565852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
WTC11_00058654	chr21	+	5663	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	-70	0	-70	0	multi-exon	FALSE	canonical	3	1008	junction_6	86.3243238542237	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	17481434	True	NA	2	True	AATAAA	-15	NA	17512972	17570100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
WTC11_00058657	chr21	+	2401	7	FSM	ENSG00000154645.14	ENST00000400128.5	2421	7	0	20	0	-12	multi-exon	FALSE	canonical	1	4	junction_2	4.17997873466148	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTTCTGAAGAATGA	17900752	True	NA	-9	True	AATAAA	-4	NA	17901262	18267353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17901425_17917219_17917401_18256508_18256819_18256969_18257128_18260199_18260287_18262790_18262894_18265953
WTC11_00058658	chr21	+	762	1	FSM	ENSG00000198618.5	ENST00000358455.4	498	1	-42	-222	-42	222	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTTAGAAAATGTTGC	18761733	True	NA	8	True	AATAAA	-30	NA	18857736	18858498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_18857700_18858500
WTC11_00058659	chr21	+	622	1	FSM	ENSG00000213885.4	ENST00000425147.1	611	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	NA	False	NA	-21	True	AATACA	-36	NA	25361809	25362431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25361800_25362400
WTC11_00058660	chr21	+	4342	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	9	0	-5	0	multi-exon	FALSE	canonical	3	26	junction_3	8.20568908339411	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	25639194	True	NA	20	True	AATAAA	-5	NA	25639266	25717562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
WTC11_00058661	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.7275515599959	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	NA	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
WTC11_00058662	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	22.6323269290239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	25734256	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
WTC11_00058664	chr21	+	1239	1	FSM	ENSG00000233783.8	ENST00000596669.1	838	1	282	-683	282	591	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAAATCCCTCCATAC	NA	False	NA	NA	False	NA	NA	NA	25934622	25935861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25934600_25935900
WTC11_00058665	chr21	+	2950	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	10	0	10	0	multi-exon	FALSE	canonical	3	53	junction_5	19.6206232860092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022564	True	NA	7	True	AATAAA	-17	NA	29024638	29054488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
WTC11_00058666	chr21	+	2941	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	-17	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.9483762813663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022576	True	NA	7	True	AATAAA	-17	NA	29024650	29054488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
WTC11_00058668	chr21	+	377	1	Genic_Genomic	ENSG00000286018.1	novel	NA	NA	NA	NA	566	20	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTGACAAAGCAAGACTC	NA	False	NA	NA	False	NA	NA	NA	29064011	29064388	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_+_29064000_29064400
WTC11_00058669	chr21	+	5704	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	-86	0	-86	0	multi-exon	FALSE	canonical	3	61	junction_1	24.5153013442625	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	NA	False	NA	13	True	AATAAA	-27	NA	29298835	29346148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
WTC11_00058670	chr21	+	6409	5	FSM	ENSG00000156273.16	ENST00000399921.5	5769	5	-640	0	-146	0	multi-exon	FALSE	canonical	3	41	junction_1	32.3419232575925	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	NA	False	NA	13	True	AATAAA	-27	NA	29298775	29346148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29299599_29321220_29321515_29326058_29327394_29329486_29329694_29342398
WTC11_00058671	chr21	+	6263	5	NIC	ENSG00000156273.16	novel	5769	5	NA	NA	177	11	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	43.8292140016223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTTTCATTTTCTCA	29297429	False	NA	24	True	AATAAA	-38	NA	29299098	29346159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_29299765_29321220_29321515_29326058_29327394_29329486_29329694_29342398
WTC11_00058672	chr21	+	787	3	FSM	ENSG00000156273.16	ENST00000435072.1	692	3	-95	0	-95	0	multi-exon	FALSE	canonical	3	6	junction_1	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTCTGGAAAATAAAA	29305094	False	NA	NA	False	NA	NA	NA	29305107	29326336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29305323_29321220_29321515_29326058
WTC11_00058673	chr21	+	238	1	FSM	ENSG00000186971.3	ENST00000334068.3	797	1	254	305	254	-305	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGGATCTCGCTTCT	30430469	False	NA	NA	False	NA	NA	NA	30430483	30430721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_30430500_30430700
WTC11_00058674	chr21	+	1029	2	FSM	ENSG00000237594.2	ENST00000433071.2	822	2	-106	-101	-106	101	multi-exon	FALSE	canonical	3	76	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATGCAGTAGGCATTG	NA	False	NA	NA	False	NA	NA	NA	31559138	31560588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31559596_31560016
WTC11_00058675	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634500	True	NA	60	True	ATTAAA	-22	NA	31659692	31668931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
WTC11_00058676	chr21	+	1858	5	FSM	ENSG00000142168.15	ENST00000470944.1	1746	5	-112	0	-69	0	multi-exon	FALSE	canonical	2	33	junction_1	1161.01022820645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31659577	False	NA	60	True	ATTAAA	-22	NA	31659596	31668931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31660709_31663789_31663887_31666448_31666519_31667257_31667376_31668470
WTC11_00058677	chr21	+	7826	11	FSM	ENSG00000142149.9	ENST00000270112.7	7680	11	5	-151	5	151	multi-exon	FALSE	canonical	3	27	junction_8	7.44378935757857	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCCTATATTGGGAACAA	31873004	False	NA	NA	False	NA	NA	NA	31873024	32004215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31873936_31924467_31924761_31940164_31940221_31946035_31946172_31958842_31958971_31968249_31968386_31974554_31974718_31983525_31983610_31990128_31990177_31995767_31995949_31998525
WTC11_00058678	chr21	+	486	4	FSM	ENSG00000142149.9	ENST00000430354.1	486	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	18.3726850393609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAGAATTACACGGGCA	NA	False	NA	NA	False	NA	NA	NA	31924551	31968334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31924761_31940164_31940221_31946035_31946172_31968249
WTC11_00058681	chr21	+	835	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	5	-9	5	9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTTTAATACGACTTC	32392806	True	NA	NA	False	AATAAA	-33	NA	32393134	32393969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_32393100_32394000
WTC11_00058682	chr21	+	1671	8	FSM	ENSG00000166979.13	ENST00000300255.7	1671	8	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	2.77010277566647	5323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGTATTTCTTT	32412550	True	NA	6	True	AATAAA	-17	NA	32412705	32515387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_32413014_32453311_32453509_32457596_32457721_32467695_32467849_32495026_32495171_32501414_32501496_32503925_32504016_32514813
WTC11_00058683	chr21	+	1285	5	FSM	ENSG00000166979.13	ENST00000496615.5	492	5	-48	-745	-48	228	multi-exon	FALSE	canonical	2	4	junction_1	3.76662979332984	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCATGAGTGATTTTAAC	32493517	False	NA	NA	False	AAAACA	-26	NA	32493604	32515625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_32493763_32495026_32495171_32501414_32501496_32503925_32504016_32514813
WTC11_00058684	chr21	+	1225	1	FSM	ENSG00000205927.5	ENST00000333337.3	3262	1	2013	24	2013	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAATAAAATTTAAAG	33027909	False	NA	NA	False	AATAAA	-16	NA	33027947	33029172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33027900_33029200
WTC11_00058685	chr21	+	1389	9	FSM	ENSG00000159110.21	ENST00000382264.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.4865239101725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGGACTCTCTCTCTCTT	33228238	True	NA	19	True	AATAAA	-19	NA	33229900	33262756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
WTC11_00058686	chr21	+	1241	8	NIC	ENSG00000159110.21	novel	1389	9	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	39.0593478320008	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGACTCTCTCTCTCTTT	33228256	True	NA	20	True	AATAAA	-20	NA	33229918	33262757	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33262560
WTC11_00058687	chr21	+	1000	7	FSM	ENSG00000249624.10	ENST00000433395.6	1000	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	38.1025662594471	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTCTGTGAGCAAACAA	NA	False	NA	NA	False	NA	NA	NA	33246773	33283212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33246891_33248708_33248855_33252661_33252831_33268393_33268518_33276595_33276754_33279751_33279919_33283093
WTC11_00058688	chr21	+	1865	6	FSM	ENSG00000243646.10	ENST00000493295.5	1991	6	126	0	126	0	multi-exon	FALSE	canonical	3	34	junction_5	7.39188744503053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	33267553	False	NA	NA	False	NA	NA	NA	33268053	33296953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
WTC11_00058689	chr21	+	568	4	FSM	ENSG00000243646.10	ENST00000498371.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	20.5101600838869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGCCGTCATCCTCAT	33267781	False	NA	NA	False	NA	NA	NA	33268281	33288120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33268518_33279751_33279919_33283093_33283242_33288103
WTC11_00058690	chr21	+	1425	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	-33	5	-28	-5	multi-exon	FALSE	canonical	3	12	junction_6	57.1297256737292	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTGTCTTAAAAGCG	33322260	True	NA	NA	False	AATAAA	-18	NA	33324941	33349072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
WTC11_00058691	chr21	+	653	5	FSM	ENSG00000142166.13	ENST00000442071.2	650	5	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.9655711206686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGTGTCTTTCCTCA	33322288	True	NA	NA	False	TATAAA	-37	NA	33324969	33349166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33345245_33345361_33349090
WTC11_00058692	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_10	14.5481957644238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	33322288	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
WTC11_00058693	chr21	+	573	5	FSM	ENSG00000142166.13	ENST00000651609.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	72.2045704924557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAGCAGCACTACTT	33322323	True	NA	NA	False	TATAAA	-29	NA	33325004	33343604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33325132_33335523_33335648_33341077_33341175_33343267_33343423_33343534
WTC11_00058694	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.830590212742	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	33400181	True	NA	20	True	AATAAA	-27	NA	33403412	33437516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
WTC11_00058695	chr21	+	1761	8	FSM	ENSG00000159128.15	ENST00000381995.5	1742	8	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	196.399322497688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTTTTCTTTATT	33400181	True	NA	25	True	AATAAA	-32	NA	33403412	33437521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33403617_33410835_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
WTC11_00058696	chr21	+	2097	6	FSM	ENSG00000159128.15	ENST00000545369.2	966	6	-559	-572	-531	0	multi-exon	FALSE	canonical	0	0	junction_3	189.985262586339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	33402726	True	NA	20	True	AATAAA	-27	NA	33402881	33437516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33403617_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
WTC11_00058698	chr21	+	7505	7	FSM	ENSG00000159140.21	ENST00000300278.8	7477	7	-28	0	-2	0	multi-exon	FALSE	canonical	3	85	junction_6	346.789761799406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	33504147	True	NA	12	True	AATAAA	-19	NA	33543035	33560667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33559876
WTC11_00058699	chr21	+	8395	12	FSM	ENSG00000159140.21	ENST00000356577.10	8393	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	205	junction_11	230.87336874723	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504147	True	NA	-19	True	AATAAA	-1	NA	33543035	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
WTC11_00058700	chr21	+	8004	5	FSM	ENSG00000159140.21	ENST00000381679.8	7860	5	-144	0	-117	0	multi-exon	FALSE	canonical	3	67	junction_4	432.213488914911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCCAGAGTGTGTTT	33542854	False	NA	5	True	AATAAA	-15	NA	33542920	33559056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33557545
WTC11_00058701	chr21	+	8394	13	FSM	ENSG00000159140.21	ENST00000455528.5	8394	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	346.120523324848	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504175	True	NA	-19	True	AATAAA	-1	NA	33543063	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33572550_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
WTC11_00058702	chr21	+	8309	12	NIC	ENSG00000159140.21	novel	8394	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	590	junction_11	147.699829618796	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504180	True	NA	-19	True	AATAAA	-1	NA	33543068	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
WTC11_00058703	chr21	+	5269	10	FSM	ENSG00000159140.21	ENST00000436227.5	5269	10	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_9	105.205618776861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33552236	False	NA	-19	True	AATAAA	-1	NA	33552247	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
WTC11_00058704	chr21	+	402	2	FSM	ENSG00000159140.21	ENST00000474355.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCCACTAACTTATAAGG	33567138	True	NA	NA	False	TATAAA	-10	NA	33567178	33569283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33567268_33568970
WTC11_00058708	chr21	+	1818	5	FSM	ENSG00000159140.21	ENST00000478183.5	1818	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	344.415809741655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33572172	False	NA	-19	True	AATAAA	-1	NA	33572212	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
WTC11_00058710	chr21	+	2335	4	FSM	ENSG00000159140.21	ENST00000491794.1	995	4	-687	-653	0	154	multi-exon	FALSE	canonical	3	590	junction_3	143.25501736414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACACA	33572486	False	NA	135	True	NA	NA	NA	33572526	33577635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33573456_33575595_33575668_33575777_33575894_33576417
WTC11_00058712	chr21	+	483	4	FSM	ENSG00000205726.15	ENST00000470742.5	474	4	-9	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_3	159.596017772653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTCCAGTTTCAAACGA	33630853	True	NA	NA	False	NA	NA	NA	33642443	33721991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33721931
WTC11_00058715	chr21	+	5486	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	-80	2	16	0	multi-exon	FALSE	canonical	3	260	junction_23	41.3766300005702	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	33642269	False	NA	27	True	ATTAAA	-17	NA	33642415	33838496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
WTC11_00058716	chr21	+	5193	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	-2	0	0	0	multi-exon	FALSE	canonical	3	78	junction_23	62.6762249309707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	33630905	True	NA	27	True	ATTAAA	-17	NA	33642495	33838496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
WTC11_00058723	chr21	+	734	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	-6	0	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	33930651	True	NA	5	True	ATTAAA	-16	NA	33931156	33938372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33931743_33938224
WTC11_00058724	chr21	+	9127	3	FSM	ENSG00000237945.8	ENST00000427447.5	9124	3	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCAGCCTGGTG	33930651	True	NA	NA	False	AATAAA	-17	NA	33931156	33977691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33931743_33945809_33945896_33969236
WTC11_00058725	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	373.093151907134	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	34051334	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
WTC11_00058726	chr21	+	13173	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	-1607	0	-1607	0	multi-exon	TRUE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	NA	False	NA	12	True	AATAAA	-13	NA	34071970	34106260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34094862
WTC11_00058727	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	22	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	34051363	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34125340_34125481_34142407
WTC11_00058728	chr21	+	5233	2	FSM	ENSG00000243927.6	ENST00000483977.5	3934	2	-1298	-1	-1298	1	multi-exon	FALSE	canonical	3	904	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGTTTTGTCCCTTTAC	NA	False	NA	20	True	AATAAA	-20	NA	34120875	34143035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34125481_34142407
WTC11_00058729	chr21	+	881	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	-41	0	-14	0	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	34375465	34389151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
WTC11_00058732	chr21	+	1188	1	FSM	ENSG00000189089.5	ENST00000408914.2	1164	1	184	-208	184	208	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGGGTATAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	36050397	36051585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36050400_36051600
WTC11_00058733	chr21	+	2758	2	FSM	ENSG00000159228.13	ENST00000439427.2	1024	2	-153	-1581	-79	0	multi-exon	FALSE	canonical	3	2371	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	36069820	False	NA	31	True	AATAAA	-17	NA	36069861	36073164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36070405_36070949
WTC11_00058735	chr21	+	1217	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	-9	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	18	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	36047289	True	NA	31	True	AATAAA	-17	NA	36070014	36073164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36070405_36070949_36071058_36072445
WTC11_00058736	chr21	+	3256	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	-289	-631	-289	631	multi-exon	FALSE	canonical	3	51	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCGGCACCGAAACTTTA	36104541	False	NA	NA	False	ATTAAA	-31	NA	36104591	36110321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36105124_36107597
WTC11_00058737	chr21	+	2976	2	FSM	ENSG00000233393.2	ENST00000685204.1	502	2	-11	-2463	0	624	multi-exon	FALSE	canonical	3	81	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTGCGGCACCGA	36102794	True	NA	NA	False	ATTAAA	-24	NA	36104880	36110314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36105124_36107581
WTC11_00058738	chr21	+	888	1	FSM	ENSG00000226054.2	ENST00000452572.1	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGAATCCTCAGGGAT	NA	False	NA	NA	False	NA	NA	NA	36130488	36131376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36130500_36131400
WTC11_00058739	chr21	+	1020	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	98	junction_1	2	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	36133823	True	NA	NA	False	AATAAA	-20	NA	36135056	36146562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36135482_36137824_36137933_36146075
WTC11_00058740	chr21	+	718	3	NNC	ENSG00000159231.6	novel	998	3	NA	NA	9	-4423	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	44.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATCCATGGGCCAGGTG	36133854	True	NA	NA	False	ATTAAA	-28	NA	36135087	36142139	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_36135482_36137824_36137933_36141923
WTC11_00058741	chr21	+	3249	18	ISM	ENSG00000142197.13	ENST00000685394.1	7063	35	-155	53927	1	-21965	5prime_fragment	FALSE	canonical	3	14	junction_2	3.53039202073498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGTGAGCAGCCTGCAC	36156245	True	NA	NA	False	NA	NA	NA	36156782	36239950	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_36156944_36164707_36164872_36199069_36199252_36200330_36200502_36208714_36208905_36211552_36211652_36211973_36212098_36214080_36214191_36214441_36214557_36219371_36219493_36223230_36223351_36225564_36225668_36227685_36227878_36230449_36231135_36232803_36233076_36237261_36237415_36238600_36238702_36239764
WTC11_00058742	chr21	+	4534	19	ISM	ENSG00000142197.13	ENST00000399151.3	7685	37	80512	0	-1254	0	3prime_fragment	FALSE	canonical	3	13	junction_18	4.47903208238808	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTCCTTTAAAGTG	NA	False	NA	12	True	ATTAAA	-24	NA	36245046	36294274	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_36246678_36247516_36247629_36248379_36248569_36251161_36251285_36253771_36253910_36260676_36260733_36263545_36263651_36263747_36263815_36270012_36270158_36277020_36277101_36277974_36278085_36278208_36278356_36280284_36280347_36281482_36281612_36288013_36288151_36288755_36288812_36289044_36289207_36292103_36292234_36293319
WTC11_00058743	chr21	+	995	6	FSM	ENSG00000142197.13	ENST00000463668.1	2178	6	0	1183	0	-1183	multi-exon	FALSE	canonical	3	18	junction_1	1.89736659610103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATACAGTCCCCCGTCCT	NA	False	NA	NA	False	NA	NA	NA	36246300	36260732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36246678_36247516_36247629_36248379_36248569_36251161_36251285_36253771_36253910_36260676
WTC11_00058744	chr21	+	4231	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	-7	0	1	0	multi-exon	TRUE	canonical	0	0	junction_4	21.4810963407364	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	36318400	True	NA	11	True	AATAAA	-22	NA	36320189	36376632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
WTC11_00058746	chr21	+	1696	7	NIC	ENSG00000159259.8	novel	4466	14	NA	NA	0	484	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	76.3007572410363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTGTTGTCGTGTTT	36381484	True	NA	7	True	AATAAA	-23	NA	36385391	36398723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36397742
WTC11_00058747	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	24.0876112919376	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	36381484	True	NA	15	True	AATAAA	-17	NA	36385391	36419015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
WTC11_00058748	chr21	+	1635	6	FSM	ENSG00000159259.8	ENST00000480486.1	1152	6	0	-483	0	483	multi-exon	FALSE	canonical	3	19	junction_5	80.5108688314814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTCTTGTTGTCGTGTT	36382152	False	NA	6	True	AATAAA	-22	NA	36386059	36398722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36397742
WTC11_00058749	chr21	+	1900	2	FSM	ENSG00000224790.3	ENST00000653177.1	2540	2	-5	645	-5	-645	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGACTCACTGCAGCCTC	36966359	True	NA	NA	False	NA	NA	NA	36966455	36970297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36966612_36968553
WTC11_00058750	chr21	+	2249	4	FSM	ENSG00000183145.9	ENST00000329553.3	2099	4	-150	0	-150	0	multi-exon	FALSE	canonical	3	10	junction_3	1.88561808316413	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATAATCACCCTTTT	37006488	False	NA	8	True	AATAAA	-14	NA	37006551	37019662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37006877_37008156_37008224_37013550_37013619_37017873
WTC11_00058753	chr21	+	2022	18	FSM	ENSG00000182670.13	ENST00000540756.5	2025	18	-4	7	0	-7	multi-exon	FALSE	canonical	3	38	junction_1	17.0691652222387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGAAGTGTAGGTCTC	37070081	True	NA	NA	False	AATAAA	-10	NA	37073276	37153316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950
WTC11_00058755	chr21	+	7725	46	FSM	ENSG00000182670.13	ENST00000355666.5	7712	46	-13	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	28.6962809996326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	37070062	True	NA	8	True	AATAAA	-16	NA	37073257	37203103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
WTC11_00058756	chr21	+	11062	48	NIC	ENSG00000182670.13	novel	10363	46	NA	NA	-581	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_29	33.9172427708266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	37077819	False	NA	8	True	AATAAA	-16	NA	37081014	37203103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37084332_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37157160_37157215_37158130_37158204_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
WTC11_00058757	chr21	+	10811	46	FSM	ENSG00000182670.13	ENST00000399017.6	10363	46	-457	9	-457	0	multi-exon	FALSE	canonical	1	21	junction_1	28.3777342730024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	37077943	False	NA	8	True	AATAAA	-16	NA	37081138	37203103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37084332_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
WTC11_00058760	chr21	+	968	1	FSM	ENSG00000272948.2	ENST00000608405.2	714	1	-266	12	-266	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTAAATTCTTTGC	37267502	False	NA	NA	False	ATTAAA	-19	NA	37267517	37268485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37267500_37268500
WTC11_00058761	chr21	+	353	3	FSM	ENSG00000157540.22	ENST00000643355.1	1866	3	0	1513	0	121	multi-exon	FALSE	canonical	1	3	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACAAACAGGCAAACAG	37478271	False	NA	NA	False	AATGAA	-12	NA	37478284	37486614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37478301_37480637_37480827_37486466
WTC11_00058762	chr21	+	3403	1	ISM	ENSG00000157540.22	ENST00000647188.2	17024	12	145201	10982	10648	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGATTTTTCACATT	37511923	True	NA	4	True	AGTAAA	-19	NA	37511973	37515376	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_37512000_37515400
WTC11_00058763	chr21	+	530	5	FSM	ENSG00000157557.13	ENST00000665212.1	530	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.5842584641601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCCACCAATGAGTTCA	38805217	False	NA	NA	False	NA	NA	NA	38805257	38814823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_38805441_38810034_38810107_38813002_38813115_38814272_38814393_38814780
WTC11_00058764	chr21	+	3668	10	FSM	ENSG00000157557.13	ENST00000360938.8	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_7	12.7055932079314	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGATAGTCCTCGT	38797392	True	NA	NA	False	AATAAA	-19	NA	38805928	38824955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_38806121_38810034_38810107_38813002_38813115_38814272_38814393_38814780_38814982_38817007_38817092_38818424_38818647_38819502_38819767_38821585_38821705_38822673
WTC11_00058765	chr21	+	1092	1	FSM	ENSG00000255568.3	ENST00000603064.2	1028	1	-37	-27	-37	27	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAAATAGCAAAAGCTT	39313805	True	NA	NA	False	NA	NA	NA	39313897	39314989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39313900_39315000
WTC11_00058766	chr21	+	1635	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	-30	-71	-30	71	multi-exon	FALSE	canonical	3	276	junction_1	55.5939520091889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGACTGTGAGAAGAC	39380268	False	NA	76	True	NA	NA	NA	39380295	39397960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
WTC11_00058767	chr21	+	601	2	FSM	ENSG00000182093.16	ENST00000471468.1	581	2	-20	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTGTTCCACTCTCTA	39380166	True	NA	NA	False	AAAAAG	-21	NA	39380393	39391205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697
WTC11_00058770	chr21	+	1466	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	159	junction_1	105.831233574971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39386607	True	NA	5	True	AGTAAA	-18	NA	39387762	39397889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
WTC11_00058772	chr21	+	1140	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	-63	-297	4	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9700509722291	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	39445617	True	NA	NA	False	AATAAA	-15	NA	39445878	39515504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
WTC11_00058774	chr21	+	12892	3	FSM	ENSG00000183778.19	ENST00000615480.5	1290	3	0	-11602	0	26	multi-exon	FALSE	canonical	3	12	junction_1	27	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCACCGTTCCTGCAGTA	39609896	True	NA	53	True	AATAAA	-40	NA	39612939	39673163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39613068_39659752_39659913_39660559
WTC11_00058775	chr21	+	13134	4	FSM	ENSG00000183778.19	ENST00000684187.2	13097	4	-23	-14	-23	14	multi-exon	FALSE	canonical	3	36	junction_2	12.9614813968157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCATGCATGGGTCACC	39612805	False	NA	41	True	AATAAA	-28	NA	39612916	39673151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559
WTC11_00058776	chr21	+	683	3	NNC	ENSG00000183778.19	novel	13097	4	NA	NA	6	-8586	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	16	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTTTTTCAGAGAT	39609902	True	NA	12	True	AATAAA	-20	NA	39612945	39652906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_39613068_39646391_39646623_39652576
WTC11_00058777	chr21	+	1791	3	NNC	ENSG00000183778.19	novel	1825	5	NA	NA	6	3086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGTTGAGTGGAACT	39609902	True	NA	-4	True	NA	NA	NA	39612945	39665975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_39613068_39663502_39663617_39664420
WTC11_00058778	chr21	+	13253	4	NNC	ENSG00000183778.19	novel	13170	5	NA	NA	3578	0	intron_retention	FALSE	canonical	2	4	junction_1	25.31578339473	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCTGACTTAATC	39645949	False	NA	27	True	AATAAA	-14	NA	39645962	39673137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_39646247_39646391_39646623_39659752_39659913_39660559
WTC11_00058780	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	39867313	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39867511_39898475_39898528_39928983
WTC11_00058781	chr21	+	8567	9	FSM	ENSG00000182240.16	ENST00000330333.11	8567	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	6.00910767086096	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGCTTTTGGAATGTT	41167555	True	NA	NA	False	AATAAA	-36	NA	41168159	41282530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
WTC11_00058782	chr21	+	877	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	-13	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.31245915016974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	41316509	True	NA	95	True	ACTAAA	-20	NA	41316800	41357431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
WTC11_00058784	chr21	+	2904	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	-141	13	-3	0	multi-exon	TRUE	canonical	2	6	junction_1	4.27017271313468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGCAGACACTGCT	41425851	True	NA	3	True	AATAAA	-3	NA	41426097	41459199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
WTC11_00058789	chr21	+	3037	15	FSM	ENSG00000160179.19	ENST00000361802.6	3034	15	-3	0	-2	0	multi-exon	FALSE	canonical	2	11	junction_9	3.77424137532083	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	42218943	True	NA	19	True	AATATA	-19	NA	42219114	42297244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288074_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
WTC11_00058790	chr21	+	2987	15	FSM	ENSG00000160179.19	ENST00000398449.8	2976	15	-11	0	-11	0	multi-exon	FALSE	canonical	2	7	junction_9	4.36591622569604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	42218957	True	NA	19	True	AATATA	-19	NA	42219128	42297244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288038_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
WTC11_00058791	chr21	+	3231	20	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-312	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	42.307736861453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513528	False	NA	6	True	AATAAA	-19	NA	42513539	42581426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
WTC11_00058792	chr21	+	3712	20	FSM	ENSG00000160190.14	ENST00000352133.3	3712	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.347523850067	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513311	True	NA	6	True	AATAAA	-19	NA	42513851	42581426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
WTC11_00058796	chr21	+	2213	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	-21	0	-21	0	multi-exon	FALSE	canonical	3	97	junction_4	35.2823985214917	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652356	True	NA	18	True	AATATA	-15	NA	42653599	42775509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
WTC11_00058798	chr21	+	1884	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	-1	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	37.2379734500505	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652765	True	NA	18	True	AATATA	-15	NA	42653748	42775509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
WTC11_00058805	chr21	+	1963	19	FSM	ENSG00000160191.18	ENST00000398225.7	1963	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.663014598534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
WTC11_00058809	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	53.0871556381579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
WTC11_00058811	chr21	+	3412	10	FSM	ENSG00000160191.18	ENST00000489319.5	3412	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	18.4156401590913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42756751	False	NA	18	True	AATATA	-15	NA	42756774	42775509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
WTC11_00058812	chr21	+	574	2	ISM	ENSG00000160194.18	ENST00000460259.1	2029	6	-25	25173	-25	-19999	5prime_fragment	FALSE	canonical	3	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCAGTAGCAGTCACT	42879333	True	NA	NA	False	AATAAA	-4	NA	42879618	42883932	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_42879866_42883605
WTC11_00058813	chr21	+	5875	5	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-11	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.924957237226	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACGTGATCGAGACAGC	42884964	True	NA	NA	False	NA	NA	NA	42893256	42913334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42893382_42896926_42897048_42903181_42904277_42906839_42906903_42908863
WTC11_00058814	chr21	+	4717	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	-11	-30	-11	30	multi-exon	FALSE	canonical	3	261	junction_2	148	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACGTGATCGAGACAGC	42884964	True	NA	NA	False	NA	NA	NA	42893256	42913334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42893382_42896926_42897048_42908863
WTC11_00058815	chr21	+	4716	4	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	0	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	230.236110692191	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACGTGATCGAGACAGC	42885028	True	NA	NA	False	NA	NA	NA	42893320	42913334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42893382_42896926_42897048_42906839_42906903_42908863
WTC11_00058816	chr21	+	5180	10	FSM	ENSG00000160199.15	ENST00000432907.6	5180	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	71.5502068394315	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42974409	False	NA	NA	False	NA	NA	NA	42974509	43033931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
WTC11_00058817	chr21	+	5300	11	FSM	ENSG00000160199.15	ENST00000291547.10	5300	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	34.0992668542888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42971915	True	NA	NA	False	NA	NA	NA	42974561	43033931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
WTC11_00058819	chr21	+	567	2	FSM	ENSG00000160199.15	ENST00000456957.2	569	2	2	0	2	0	multi-exon	FALSE	canonical	3	284	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACAAGATCCAAACTGC	NA	False	NA	NA	False	NA	NA	NA	43003890	43007515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43004433_43007490
WTC11_00058821	chr21	+	430	1	FSM	ENSG00000234289.6	ENST00000599962.2	467	1	-2	39	-2	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTAAGTAAACTTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	43565179	43565609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43565200_43565600
WTC11_00058822	chr21	+	5084	16	FSM	ENSG00000160208.13	ENST00000340648.6	5078	16	-8	2	-8	0	multi-exon	TRUE	canonical	3	342	junction_9	35.4484915836423	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTTTGATGTTGAC	43645449	True	NA	16	True	ATTAAA	-21	NA	43659551	43696077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
WTC11_00058823	chr21	+	4634	5	FSM	ENSG00000160208.13	ENST00000470886.1	4634	5	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	31.4910701628255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTTTGATGTTGAC	43686103	False	NA	16	True	ATTAAA	-21	NA	43686131	43696077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
WTC11_00058824	chr21	+	7341	11	FSM	ENSG00000160209.19	ENST00000291565.9	7341	11	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_5	42.7546488700352	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGAGGCATGATGGTT	43709674	True	NA	10	True	AATAAA	-16	NA	43719128	43762299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
WTC11_00058826	chr21	+	566	6	FSM	ENSG00000160214.13	ENST00000475534.5	588	6	22	0	22	0	multi-exon	FALSE	canonical	1	11	junction_1	213.68518900476	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGCCGAGGAGGTGAGG	43784998	True	NA	NA	False	NA	NA	NA	43789534	43797537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43789696_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421
WTC11_00058827	chr21	+	829	9	FSM	ENSG00000160214.13	ENST00000483896.5	805	9	-24	0	22	0	multi-exon	FALSE	canonical	1	2	junction_1	227.54436380627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGAATGAACTGGACAC	43784998	True	NA	NA	False	NA	NA	NA	43789534	43797982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43789763_43791015_43791057_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906
WTC11_00058828	chr21	+	1002	3	FSM	ENSG00000160214.13	ENST00000492638.1	1017	3	0	15	0	-15	multi-exon	FALSE	canonical	3	554	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCAGCCACCAGGGTG	43785040	True	NA	NA	False	GATAAA	-10	NA	43789576	43793404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43789763_43791349_43791433_43792671
WTC11_00058829	chr21	+	3416	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	-458	0	458	multi-exon	FALSE	canonical	3	403	junction_7	48.9701581464558	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTGGTAGCCTCTTT	43785040	True	NA	25	True	TTTAAA	-40	NA	43789576	43805751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
WTC11_00058831	chr21	+	3019	10	FSM	ENSG00000160214.13	ENST00000467112.5	3019	10	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_4	43.5790752824006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	43792875	False	NA	NA	False	NA	NA	NA	43792930	43805293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
WTC11_00058833	chr21	+	3583	9	NIC	ENSG00000160216.21	novel	6565	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	9.32402809948576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAATTTTTTTTTTTT	43864942	True	NA	13	True	AATAAA	-15	NA	43865222	43984673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_43865346_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
WTC11_00058834	chr21	+	5482	10	FSM	ENSG00000160216.21	ENST00000291572.13	6565	10	0	1083	0	-27	multi-exon	FALSE	canonical	3	22	junction_4	6.83310749400969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGGAGTTACTTGATA	43864942	True	NA	NA	False	ACTAAA	-12	NA	43865222	43986509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43865346_43903956_43904020_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
WTC11_00058836	chr21	+	7279	23	FSM	ENSG00000160218.13	ENST00000291574.9	6986	23	-298	5	-298	-5	multi-exon	FALSE	canonical	3	52	junction_22	20.7723294173159	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTATTTTGCACTGGA	44011980	False	NA	NA	False	AATACA	-11	NA	44012010	44106547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44012561_44032090_44032173_44037791_44037928_44052279_44052477_44055697_44055894_44059102_44059215_44063537_44063786_44074323_44074471_44075038_44075154_44076551_44076629_44077692_44077785_44079563_44079705_44080014_44080128_44082787_44083303_44084121_44084264_44086801_44086961_44087698_44087929_44089832_44089934_44091922_44092050_44094062_44094234_44098356_44098535_44102777_44102973_44103292
WTC11_00058838	chr21	+	3316	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	-128	0	-102	0	multi-exon	FALSE	canonical	3	33	junction_15	98.1088171368914	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	44102779	True	NA	89	True	ATTAAA	-16	NA	44107270	44131181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
WTC11_00058839	chr21	+	583	4	FSM	ENSG00000241945.8	ENST00000486126.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	34.9888871246603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAACAACCTGACAGCTG	44110084	False	NA	NA	False	AATAAA	-9	NA	44114575	44117843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44114769_44115263_44115400_44115690_44115921_44117819
WTC11_00058840	chr21	+	1098	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	-21	0	-13	0	multi-exon	FALSE	canonical	3	43	junction_5	316.825125266289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	NA	False	NA	NA	False	ATTAAA	-19	NA	44133596	44141417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
WTC11_00058842	chr21	+	781	5	FSM	ENSG00000160221.18	ENST00000493883.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	394.779922868426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	44128352	True	NA	NA	False	ATTAAA	-19	NA	44133638	44141417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44136059_44136174_44137176_44137297_44140249_44140343_44141163
WTC11_00058843	chr21	+	807	5	FSM	ENSG00000160221.18	ENST00000480786.1	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_4	54.1589097009901	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	44128387	True	NA	NA	False	NA	NA	NA	44133673	44140604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249
WTC11_00058844	chr21	+	1593	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	305.749716089629	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	44128387	True	NA	NA	False	AATAAA	-17	NA	44133673	44145711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
WTC11_00058845	chr21	+	987	6	FSM	ENSG00000160221.18	ENST00000389690.7	694	6	0	-293	0	293	multi-exon	FALSE	canonical	3	47	junction_5	315.244032457396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCCTGCGTGGCCAGCC	44128492	False	NA	NA	False	NA	NA	NA	44133778	44141710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44141163
WTC11_00058848	chr21	+	2926	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	-19	0	-17	0	multi-exon	FALSE	canonical	3	981	junction_11	84.8875473294521	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	44286999	True	NA	40	True	AATAAA	-37	NA	44300033	44327373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
WTC11_00058849	chr21	+	6007	11	FSM	ENSG00000141959.17	ENST00000474114.5	6007	11	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_2	91.6351460958076	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	44315486	False	NA	43	True	AATAAA	-40	NA	44315526	44327376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44316340_44316431_44316525_44318469_44318596_44319350_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44326061_44326158_44326265_44326714
WTC11_00058851	chr21	+	1947	11	FSM	ENSG00000141959.17	ENST00000467315.5	1947	11	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_3	92.1869838968604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	44319854	False	NA	43	True	AATAAA	-40	NA	44319866	44327376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
WTC11_00058852	chr21	+	2818	10	FSM	ENSG00000141959.17	ENST00000460521.5	2818	10	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_2	87.9507437906771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	44320560	False	NA	43	True	AATAAA	-40	NA	44320576	44327376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
WTC11_00058854	chr21	+	5845	2	FSM	ENSG00000160233.8	ENST00000291592.6	5845	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTGGATTCTGTCGT	44454913	True	NA	7	True	AGTAAA	-20	NA	44455509	44462196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44455656_44456497
WTC11_00058855	chr21	+	778	1	FSM	ENSG00000274225.1	ENST00000617205.1	644	1	-194	60	-194	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCAGCATTTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	44477655	44478433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44477700_44478400
WTC11_00058856	chr21	+	1898	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	-39	-3	-39	3	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACGCACTCAGAAAAATCA	44482801	True	NA	11	True	AATAAA	-19	NA	44485446	44491144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44486231_44490030
WTC11_00058857	chr21	+	1416	2	NNC	ENSG00000228709.2	novel	1856	2	NA	NA	91	14	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCAGTTATCCTCTC	44482931	False	NA	22	True	AATAAA	-30	NA	44485576	44491155	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_44486231_44490393
WTC11_00058858	chr21	+	2108	6	FSM	ENSG00000235890.2	ENST00000451035.2	2108	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.8585712797929	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGGCGATTCTCTGAGT	NA	False	NA	19	True	AATAAA	-32	NA	44506806	44516575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44507100_44508036_44508310_44508726_44508930_44509251_44509407_44509822_44509928_44515496
WTC11_00058859	chr21	+	2948	3	FSM	ENSG00000182912.6_ENSG00000235890.2	ENST00000330490.3	823	3	-2125	0	-2125	0	multi-exon	FALSE	canonical	3	5	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTGATAACGTTTCA	NA	False	NA	8	True	GATAAA	-22	NA	44515090	44518756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44517836_44518258_44518333_44518627
WTC11_00058860	chr21	+	931	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	-67	16	-67	0	multi-exon	FALSE	canonical	3	172	junction_2	72.9492974606336	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44939910	False	NA	-12	True	AATAAA	-42	NA	44939944	44976973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
WTC11_00058861	chr21	+	909	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	-17	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	69.8896272704326	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44928283	True	NA	-12	True	AATAAA	-42	NA	44940011	44976973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
WTC11_00058862	chr21	+	448	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	-25	20	-25	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCTGGTTTTGAAA	44978787	True	NA	14	True	AATAAA	-16	NA	44978806	44979254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44978800_44979300
WTC11_00058863	chr21	+	601	4	FSM	ENSG00000197381.17	ENST00000462214.5	587	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	11	junction_3	7.71722460186015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATCCTGATATGTC	45073378	True	NA	NA	False	NA	NA	NA	45073838	45137326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45073904_45128401_45128574_45134714_45134833_45137080
WTC11_00058864	chr21	+	6907	11	FSM	ENSG00000197381.17	ENST00000348831.9	6902	11	-5	0	-5	0	multi-exon	FALSE	canonical	1	14	junction_9	16.1987653850533	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	45073666	True	NA	7	True	AATAAA	-18	NA	45074574	45226560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184922_45185092_45204554_45204737_45220835_45221015_45222017
WTC11_00058866	chr21	+	3581	13	FSM	ENSG00000197381.17	ENST00000389863.8	3563	13	-20	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_8	22.9619250064101	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGGTGTTGCTGAGAC	45073671	True	NA	5	True	AATAAA	-16	NA	45074579	45226558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184473_45184594_45184922_45185092_45204554_45204737_45220835_45221015_45222017_45222108_45225546
WTC11_00058873	chr21	+	7152	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	43	-6715	16	13	multi-exon	FALSE	canonical	2	6	junction_1	2.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTATTCTTGCCA	45287142	True	NA	30	True	TATAAA	-30	NA	45288077	45297367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45288245_45289350_45289439_45290470
WTC11_00058874	chr21	+	5408	42	FSM	ENSG00000182871.16	ENST00000651438.1	5408	42	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_8	193.473284866848	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	45380178	True	NA	18	True	AATAAA	-19	NA	45405164	45513720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45405242_45405378_45405474_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
WTC11_00058875	chr21	+	3386	23	FSM	ENSG00000182871.16	ENST00000342220.9	3386	23	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_17	303.332046738409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	45490252	False	NA	18	True	AATAAA	-19	NA	45490274	45513720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505834_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
WTC11_00058876	chr21	+	2515	5	FSM	ENSG00000182871.16	ENST00000473212.1	2515	5	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_2	148.609177038297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTTTAAAAGTTTAAAA	45505924	False	NA	11	True	AATAAA	-18	NA	45506018	45512567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
WTC11_00058877	chr21	+	2224	16	FSM	ENSG00000183570.17	ENST00000400314.5	2202	16	-22	0	-22	0	multi-exon	FALSE	canonical	2	19	junction_2	12.2412780741591	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	45643214	True	NA	5	True	AATAAA	-19	NA	45643671	45942454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45643869_45735391_45735430_45849960_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
WTC11_00058878	chr21	+	1903	13	FSM	ENSG00000183570.17	ENST00000400308.5	1911	13	0	8	0	-4	multi-exon	FALSE	canonical	3	12	junction_8	14.8436293854749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCACCGGCTCTGGCT	NA	False	NA	-3	True	AATAAA	-11	NA	45849960	45942446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45917587_45917630_45929919_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
WTC11_00058880	chr21	+	640	1	FSM	ENSG00000274248.1	ENST00000621707.1	465	1	-178	3	-178	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGCTTGGAGGGCTTG	45974297	False	NA	6	True	AATAAA	-16	NA	45974310	45974950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45974300_45975000
WTC11_00058881	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	173.44610413054	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	45972977	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
WTC11_00058884	chr21	+	2358	6	FSM	ENSG00000142156.16	ENST00000498614.5	2358	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	32.7206356906464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTTATCTTCCCCAC	46001184	False	NA	24	True	AATAAA	-17	NA	46001196	46005050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
WTC11_00058888	chr21	+	3458	28	FSM	ENSG00000142173.16	ENST00000310645.9	3446	28	-12	0	-5	0	multi-exon	FALSE	canonical	3	12	junction_27	93.9795675776658	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGAGTCCTTCTTTG	46092889	True	NA	19	True	NA	NA	NA	46098106	46129805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46128902
WTC11_00058889	chr21	+	3450	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	-5	0	-5	0	multi-exon	FALSE	canonical	3	275	junction_1	51.6856861315745	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	46092889	True	NA	14	True	AATAAA	-14	NA	46098106	46132848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
WTC11_00058891	chr21	+	3101	27	FSM	ENSG00000142173.16	ENST00000397763.5	3101	27	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_26	84.0298358537577	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGTCCTTCTTTGCTG	NA	False	NA	22	True	NA	NA	NA	46111449	46129808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
WTC11_00058895	chr21	+	3225	4	FSM	ENSG00000215424.10	ENST00000664725.1	3213	4	-12	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10.1434160364686	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAACCTTACCTTAGT	46228305	True	NA	NA	False	ATTAAA	-3	NA	46229216	46246292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46243406
WTC11_00058896	chr21	+	2642	4	FSM	ENSG00000215424.10	ENST00000669476.1	2621	4	-21	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	9.41629792788369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCGTTCTTTTTTTTTT	46228288	True	NA	NA	False	TTTAAA	-16	NA	46229199	46251871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46249585
WTC11_00058898	chr21	+	1452	2	FSM	ENSG00000215424.10	ENST00000420074.1	1947	2	495	0	495	0	multi-exon	FALSE	canonical	1	1	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGGATGTCAATAAAC	46230002	False	NA	NA	False	AATAAA	-15	NA	46230018	46235453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46230528_46234510
WTC11_00058899	chr21	+	2116	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	-596	-608	-583	341	multi-exon	FALSE	canonical	3	252	junction_1	8.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGGGACAGCCACGCA	NA	False	NA	NA	False	ATTAAA	-36	NA	46285758	46292538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286416_46286869_46287124_46291333
WTC11_00058900	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	26.6364412037344	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284148	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
WTC11_00058901	chr21	+	1091	5	FSM	ENSG00000182362.14	ENST00000329319.7	1019	5	-100	28	-58	0	multi-exon	FALSE	canonical	3	65	junction_1	99.8883751995196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46286205	False	NA	9	True	AATAAA	-16	NA	46286283	46297723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286738_46286869_46287124_46291333_46291463_46296161_46296231_46297538
WTC11_00058902	chr21	+	571	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	106.887271875041	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46284159	True	NA	9	True	AATAAA	-16	NA	46286352	46297723	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
WTC11_00058903	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.592527167609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46285826	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
WTC11_00058904	chr21	+	10526	47	FSM	ENSG00000160299.17	ENST00000359568.10	10526	47	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_17	46.7095356253569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	46321131	True	NA	36	True	AATAAA	-28	NA	46324155	46445769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479_46363935_46366583_46367140_46381693_46381841_46385831_46385984_46388741_46388885_46389198_46389432_46390669_46390833_46391163_46391377_46397264_46397495_46398013_46398131_46398234_46398256_46399589_46399797_46401550_46401722_46402330_46402484_46411188_46412068_46412836_46412993_46416068_46416840_46418203_46418307_46421969_46422125_46425830_46425972_46427621_46427796_46428394_46428591_46430009_46430233_46430506_46430658_46431528_46432216_46435903_46436149_46436978_46437082_46438163_46438338_46440082_46440203_46440854_46441085_46442496_46442574_46443809_46443949_46444693_46444822_46445283
WTC11_00058905	chr21	+	10485	47	FSM	ENSG00000160299.17	ENST00000480896.5	10485	47	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	47.23090126206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	46324856	False	NA	36	True	AATAAA	-28	NA	46324887	46445769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46325211_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479_46363935_46366583_46367140_46381693_46381841_46385831_46385984_46388741_46388885_46389198_46389432_46390669_46390833_46391163_46391377_46397264_46397495_46398013_46398131_46398234_46398256_46399589_46399797_46401550_46401722_46402330_46402484_46411188_46412068_46412836_46412993_46416068_46416840_46418203_46418307_46421969_46422125_46425830_46425972_46427621_46427796_46428394_46428591_46430009_46430233_46430506_46430658_46431528_46431979_46435903_46436149_46436978_46437082_46438163_46438338_46440082_46440203_46440854_46441085_46442496_46442574_46443809_46443949_46444693_46444822_46445283
WTC11_00058909	chr21	+	7664	38	FSM	ENSG00000160305.18	ENST00000417564.3	7350	38	-25	-289	-25	289	multi-exon	TRUE	canonical	2	39	junction_8	14.497273112018	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAATGGACATGTGCTCA	46455993	True	NA	NA	False	NA	NA	NA	46458865	46570304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770_46549886_46550542_46550745_46551633_46551744_46551823_46551905_46554168_46554293_46554574_46554697_46554821_46554934_46555981_46556092_46556938_46557070_46557584_46557754_46558222_46558394_46560721_46560784_46561747_46561806_46563857_46563933_46565712_46565888_46566559_46566684_46567369
WTC11_00058911	chr21	+	2720	20	FSM	ENSG00000160305.18	ENST00000466639.5	2711	20	0	-9	0	9	multi-exon	FALSE	canonical	2	16	junction_5	16.9525980816349	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATCCTTACTGTCCA	46456104	True	NA	16	True	AGTAAA	-30	NA	46458976	46547214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
WTC11_00058912	chr21	+	2760	21	FSM	ENSG00000160305.18	ENST00000435722.7	2760	21	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_8	12.4236669305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	46459028	False	NA	7	True	AGTAAA	-21	NA	46459056	46547205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
WTC11_00058918	chr21	+	1955	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	-81	0	-81	0	multi-exon	FALSE	canonical	1	4	junction_6	248.170859510548	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	46635480	False	NA	NA	False	ATTAAA	-9	NA	46635513	46665117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
WTC11_00058919	chr21	+	2151	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	-20	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	193.920499174275	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46635561	False	NA	24	True	AATAAA	-24	NA	46635594	46664951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00058920	chr21	+	1030	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	-19	0	8	0	multi-exon	FALSE	canonical	3	26	junction_6	234.908315448106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	46627804	True	NA	NA	False	NA	NA	NA	46635622	46664473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
WTC11_00058921	chr21	+	2199	12	NNC	ENSG00000160310.19	novel	2354	12	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_1	214.427047448977	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTCATTGTGTATCCT	46627823	True	NA	15	True	AATAAA	-15	NA	46635641	46664942	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46635764_46636443_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00058922	chr21	+	2888	11	FSM	ENSG00000160310.19	ENST00000397637.5	2880	11	-8	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	200.41566805018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46627823	True	NA	24	True	AATAAA	-24	NA	46635641	46664951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00058923	chr21	+	978	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	-24	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	93.3372380135603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	46627831	True	NA	NA	False	NA	NA	NA	46635649	46649893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
WTC11_00058924	chr21	+	2378	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	-24	0	0	0	multi-exon	FALSE	canonical	3	210	junction_11	196.111454227791	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627831	True	NA	NA	False	ATTAAA	-16	NA	46635649	46665124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00058925	chr21	+	1939	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	-7	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	244.17450214959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627855	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
WTC11_00058926	chr21	+	1200	8	NIC	ENSG00000160310.19	novel	2354	12	NA	NA	0	190	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	244.816382671769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCACATTATGACGA	46627862	True	NA	NA	False	AATAAA	-16	NA	46635680	46653142	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
WTC11_00058928	chr21	+	2015	5	FSM	ENSG00000160310.19	ENST00000481861.1	1301	5	0	-714	0	714	multi-exon	FALSE	canonical	3	357	junction_4	136.510759649194	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	46643520	False	NA	39	True	ATTAAA	-21	NA	46643534	46660144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
WTC11_00058931	chr21	+	5342	4	FSM	ENSG00000160310.19	ENST00000486520.1	4031	4	-551	-760	-551	587	multi-exon	FALSE	canonical	3	210	junction_3	16.1107279647928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGACTTTTTCATTGTG	46656253	False	NA	45	True	ATTAAA	-45	NA	46656271	46665711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46658921_46660832_46661937_46663382_46663555_46664294
WTC11_00058932	chr21	+	635	1	FSM	ENSG00000212932.3	ENST00000427757.1	463	1	62	-234	62	234	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTATATTAATCTTA	NA	False	NA	NA	False	NA	NA	NA	46690825	46691460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46690800_46691500
WTC11_00058933	chr21	-	1390	6	FSM	ENSG00000280071.4	ENST00000620015.4	1435	6	43	2	43	-2	multi-exon	FALSE	canonical	0	0	junction_1	380.288627229372	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGCTGCATTCATC	-5122386	False	NA	NA	False	AATAAA	-15	NA	5127100	5116342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127083
WTC11_00058934	chr21	-	1595	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_1	304.574429874429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATCTGTGTGTTCAGGG	-5123655	True	NA	NA	False	AATAAA	-28	NA	5128369	5116329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
WTC11_00058935	chr21	-	1599	7	FSM	ENSG00000276612.3	ENST00000623476.2	1599	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	346.945921178247	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGCTGCATTCATC	-5133790	False	NA	NA	False	AATAAA	-15	NA	5133805	5116342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5133425_5133501_5133654
WTC11_00058937	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	314.561663271289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	-5128258	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
WTC11_00058938	chr21	-	783	5	FSM	ENSG00000280071.4	ENST00000623810.2	781	5	0	-2	0	0	multi-exon	FALSE	canonical	2	5	junction_4	386.512936394113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	-5123699	True	NA	NA	False	ATTAAA	-21	NA	5128413	5120633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5128213
WTC11_00058941	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_20	102.023661471249	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	-5154644	False	NA	NA	False	ATTAAA	-16	NA	5154658	5130870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
WTC11_00058943	chr21	-	3874	3	FSM	ENSG00000280433.1	ENST00000623744.1	3898	3	24	0	24	0	multi-exon	FALSE	canonical	3	48	junction_1	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTCCTCCTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	5165448	5157011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5158760_5159079_5159275_5163517
WTC11_00058944	chr21	-	346	1	FSM	ENSG00000274559.3	ENST00000464664.3	460	1	88	26	88	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAATTGATGCCTGCAG	NA	False	NA	NA	False	AGTAAA	-3	NA	5973295	5972949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5972900_5973300
WTC11_00058945	chr21	-	441	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	24	0	-9	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267289	6230665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6230952_6267134
WTC11_00058946	chr21	-	924	9	NNC	ENSG00000275895.7	novel	1019	9	NA	NA	0	43868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1960.83068732999	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGAAAAGGA	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6440754	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_6440781_6484623_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
WTC11_00058947	chr21	-	970	9	NNC	ENSG00000275895.7	novel	1019	9	NA	NA	0	43868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2180.93917556176	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGAAAAGGA	-6493016	True	NA	NA	False	NA	NA	NA	6499248	6440754	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_6440781_6484623_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
WTC11_00058948	chr21	-	2781	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	-328	0	328	multi-exon	FALSE	canonical	3	142	junction_16	654.980173244771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGGCTGGAGTACAA	-6467409	False	NA	NA	False	NA	NA	NA	6467509	6444540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
WTC11_00058949	chr21	-	2842	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	-328	0	328	multi-exon	FALSE	canonical	3	500	junction_10	514.548284906286	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGGCTGGAGTACAA	-6467432	False	NA	NA	False	NA	NA	NA	6467532	6444540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
WTC11_00058950	chr21	-	2681	18	FSM	ENSG00000274276.5	ENST00000618024.4	2353	18	0	-328	0	328	multi-exon	FALSE	canonical	3	40	junction_17	680.644163648415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGGCTGGAGTACAA	-6467940	False	NA	NA	False	NA	NA	NA	6468040	6444540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
WTC11_00058951	chr21	-	1687	6	ISM	ENSG00000274276.5	ENST00000618024.4	2353	18	16358	0	-1050	0	3prime_fragment	FALSE	canonical	3	860	junction_1	583.388721179969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6451682	6444868	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903
WTC11_00058953	chr21	-	2556	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	-564	0	0	multi-exon	FALSE	canonical	3	72	junction_1	722.23252493169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467432	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
WTC11_00058955	chr21	-	998	4	ISM	ENSG00000274276.5	ENST00000624921.1	774	6	-26	1750	0	-1750	5prime_fragment	FALSE	canonical	3	1685	junction_3	166.665999998667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGGGGAAGGGCATTTC	-6467409	False	NA	NA	False	NA	NA	NA	6467509	6459650	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_6460294_6463662_6463880_6464943_6465020_6467447
WTC11_00058956	chr21	-	957	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	-12	0	12	multi-exon	FALSE	canonical	3	3771	junction_6	907.400638289034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTGTGGAAGTTC	-6493016	True	NA	NA	False	AATAAA	-32	NA	6499248	6484610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
WTC11_00058957	chr21	-	1019	9	FSM	ENSG00000275895.7	ENST00000639996.1	1019	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	1980.24613369147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGGTGTAACTTATTT	-6493024	True	NA	NA	False	AATAAA	-19	NA	6499256	6484623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
WTC11_00058958	chr21	-	3343	2	FSM	ENSG00000275895.7	ENST00000636923.1	3339	2	0	-4	0	0	multi-exon	FALSE	canonical	3	6211	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	6488059	6484625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6486231_6486321
WTC11_00058959	chr21	-	4715	7	FSM	ENSG00000275895.7	ENST00000624739.1	4715	7	0	0	0	0	multi-exon	FALSE	canonical	3	4210	junction_5	692.133416811143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTTTCTGAATAAAA	-6493029	True	NA	NA	False	TTTAAA	-26	NA	6499261	6484660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6496081_6499128
WTC11_00058960	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2360	junction_5	1551.68765266357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6484708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
WTC11_00058961	chr21	-	338	4	FSM	ENSG00000275895.7	ENST00000637031.1	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	1616.41331348143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAGGTGAGAGAACTG	-6489922	False	NA	NA	False	NA	NA	NA	6496154	6487370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6487413_6492130_6492198_6493043_6493111_6495992
WTC11_00058963	chr21	-	3982	3	FSM	ENSG00000275895.7	ENST00000636177.1	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	2662	junction_1	1543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAAAGAGTTTTGAGCA	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6489290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6493111_6495992_6496081_6499128
WTC11_00058964	chr21	-	1268	2	FSM	ENSG00000278878.1	ENST00000624181.1	674	2	0	-594	0	188	multi-exon	FALSE	canonical	3	99	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCGGGCATAGTG	NA	False	NA	NA	False	AATATA	-4	NA	6670650	6667115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6668255_6670521
WTC11_00058965	chr21	-	1288	2	NIC	ENSG00000280018.4	novel	936	3	NA	NA	0	188	intron_retention	FALSE	canonical	3	100	junction_1	0	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCGGGCATAGTG	NA	False	NA	NA	False	AATATA	-4	NA	6997740	6994185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_6995325_6997591
WTC11_00058966	chr21	-	3370	1	ISM	ENSG00000277991.4	ENST00000623374.1	7632	2	6411	0	2900	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7672766	7669396	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_7669400_7672800
WTC11_00058967	chr21	-	923	1	FSM	ENSG00000280800.1	ENST00000631211.1	923	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGAGGCAAGGGGCGGG	-8211296	False	NA	NA	False	NA	NA	NA	8211306	8210383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8210400_8211300
WTC11_00058968	chr21	-	6302	3	Antisense	novelGene_ENSG00000278189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACGGGCCGCTCGGCGGA	NA	False	NA	NA	False	NA	NA	NA	8446212	8213878	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8216929_8399960_8400341_8443340
WTC11_00058969	chr21	-	2886	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACACACCCCCGCCGCCG	-8218937	False	NA	NA	False	NA	NA	NA	8218947	8216061	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_8216100_8218900
WTC11_00058970	chr21	-	5072	2	Antisense	novelGene_ENSG00000275215.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCGGCGGACGGACGGAC	NA	False	NA	NA	False	NA	NA	NA	8401980	8213869	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8218829_8401867
WTC11_00058972	chr21	-	1780	1	FSM	ENSG00000280614.1	ENST00000625598.1	923	1	-1075	218	-1075	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAATTTCACCTCTAGC	NA	False	NA	NA	False	AAAACA	-42	NA	8395416	8393636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8393600_8395400
WTC11_00058973	chr21	-	5046	2	Antisense	novelGene_ENSG00000278189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACGCGCGCGTGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	8446212	8398166	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8400341_8443340
WTC11_00058974	chr21	-	923	1	FSM	ENSG00000281181.1	ENST00000627981.1	923	1	-705	705	-705	-705	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTCCCTCTAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	8439256	8438333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8438300_8439300
WTC11_00058975	chr21	-	1501	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACCGCGGCCCCGGGGGC	NA	False	NA	NA	False	NA	NA	NA	8446210	8444709	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_8444700_8446200
WTC11_00058976	chr21	-	1082	2	Antisense	novelGene_ENSG00000280441.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGCGAGAGCGGCAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	8449063	8447249	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8447587_8448318
WTC11_00058977	chr21	-	1082	2	Antisense	novelGene_ENSG00000280441.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGCGAGAGCGGCAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	8449063	8447249	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8447727_8448458
WTC11_00058978	chr21	-	3946	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	-1	0	1	multi-exon	TRUE	canonical	3	173	junction_4	14.5150783669948	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACTTTTTCATTCAGG	-14379773	True	NA	-1	True	AATAAA	-28	NA	14383146	14371113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
WTC11_00058979	chr21	-	7557	3	FSM	ENSG00000180530.11	ENST00000400199.5	7562	3	0	5	0	-5	multi-exon	FALSE	canonical	1	3	junction_1	8	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTCTGGTTTGAAATGA	-15063828	True	NA	-14	True	AATAAA	-15	NA	15064934	14961239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14968527_15043494_15043575_15064744
WTC11_00058980	chr21	-	7816	4	FSM	ENSG00000180530.11	ENST00000318948.7	7751	4	-65	0	-65	0	multi-exon	FALSE	canonical	3	11	junction_1	5.35412613473634	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	-15063959	True	NA	-9	True	AATAAA	-20	NA	15065065	14961234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14968527_15014343_15014467_15043494_15043575_15064744
WTC11_00058981	chr21	-	7671	3	FSM	ENSG00000180530.11	ENST00000400202.5	7671	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	-15063894	True	NA	-9	True	AATAAA	-20	NA	15065000	14961234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14968527_15014343_15014467_15064744
WTC11_00058982	chr21	-	437	1	FSM	ENSG00000232260.2	ENST00000413813.1	468	1	-53	84	-53	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCAGAAGACACTGA	NA	False	NA	NA	False	AGTAAA	-4	NA	17519046	17518609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17518600_17519000
WTC11_00058983	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	81.5033741632823	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612844	17593652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
WTC11_00058984	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	23.0908531674341	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612901	17593652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
WTC11_00058985	chr21	-	531	2	FSM	ENSG00000154640.15	ENST00000464058.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGGAGGCCAATGCTA	NA	False	NA	NA	False	TTTAAA	-41	NA	17612851	17608774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17609153_17612698
WTC11_00058986	chr21	-	5403	5	FSM	ENSG00000154642.11	ENST00000284881.9	5396	5	0	-7	0	7	multi-exon	FALSE	canonical	3	106	junction_4	14.0178457688762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTGGATGCTTTGAA	-17815995	True	NA	-18	True	AATAAA	-23	NA	17819356	17788966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17819302
WTC11_00058987	chr21	-	5439	5	NNC	ENSG00000154642.11	novel	5396	5	NA	NA	-280	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	54.5939557094007	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGAGTGGATGCTTTG	-17819572	True	NA	-20	True	AATAAA	-21	NA	17819666	17788968	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17819574
WTC11_00058989	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.6260011349907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	-17816025	True	NA	-17	True	AATAAA	-19	NA	17819386	17793246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
WTC11_00058991	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	25.9939896899264	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	-23384898	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
WTC11_00058992	chr21	-	1293	5	NIC	ENSG00000228592.2	novel	1784	5	NA	NA	0	229	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	108.37521626276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAACCCATAGACTTTC	-23381595	True	NA	NA	False	AAAAAG	-19	NA	23384846	23361498	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_23362240_23364037_23364194_23372326_23372427_23372947_23373085_23384687
WTC11_00058993	chr21	-	924	4	FSM	ENSG00000228592.2	ENST00000661065.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	21.9241115365405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGTGTGTGTTTATGT	NA	False	NA	NA	False	AATAAA	-13	NA	23373086	23361732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947
WTC11_00058994	chr21	-	2922	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	-74	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	14.7044966667418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	-23384898	False	NA	NA	False	AAAAAG	-22	NA	23384920	23361763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
WTC11_00058995	chr21	-	1108	12	NNC	ENSG00000154719.14	novel	1074	10	NA	NA	0	106739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	365.129706377527	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAGCTCAACA	-25603904	True	NA	NA	False	CATAAA	-35	NA	25607481	25478916	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_25478932_25537508_25537529_25585656_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
WTC11_00058996	chr21	-	483	1	FSM	ENSG00000260583.1	ENST00000567517.1	557	1	17	57	17	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCCTTCAGATCCTTT	NA	False	NA	NA	False	NA	NA	NA	25583309	25582826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25582800_25583300
WTC11_00058998	chr21	-	590	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	-1	0	1	multi-exon	FALSE	canonical	3	111	junction_4	3051.77672635139	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTAGAGTTGTT	-25708768	True	NA	-5	True	AATAAA	-39	NA	25734904	25724478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
WTC11_00058999	chr21	-	590	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	-1	0	1	multi-exon	FALSE	canonical	3	101	junction_3	2932.40481516451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTAGAGTTGTT	-25708897	True	NA	-5	True	AATAAA	-39	NA	25735033	25724478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
WTC11_00059000	chr21	-	648	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	-1	0	1	multi-exon	FALSE	canonical	3	109	junction_3	2928.66640109264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTAGAGTTGTT	-25734166	True	NA	-5	True	AATAAA	-39	NA	25735639	25724478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
WTC11_00059001	chr21	-	827	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	-1	0	1	multi-exon	FALSE	canonical	3	108	junction_3	2929.13369824974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTAGAGTTGTT	-25734173	True	NA	-5	True	AATAAA	-39	NA	25735646	25724478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
WTC11_00059002	chr21	-	1180	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	-1	0	1	multi-exon	FALSE	canonical	3	177	junction_3	2896.89331679454	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTAGAGTTGTT	-25735655	False	NA	-5	True	AATAAA	-39	NA	25735673	25724478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
WTC11_00059003	chr21	-	546	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	-20	0	0	multi-exon	FALSE	canonical	3	5795	junction_1	434.822824710121	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708768	True	NA	-6	True	AATAAA	-38	NA	25734904	25724479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
WTC11_00059004	chr21	-	3355	16	FSM	ENSG00000142192.21	ENST00000348990.9	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	311.880504182113	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109453	True	NA	-30	True	AATAAA	-19	NA	26170767	25880549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
WTC11_00059005	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_11	250.679809282692	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109456	True	NA	-30	True	AATAAA	-19	NA	26170770	25880549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
WTC11_00059006	chr21	-	3543	17	FSM	ENSG00000142192.21	ENST00000357903.7	3543	17	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_10	229.135595431504	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109473	True	NA	-30	True	AATAAA	-19	NA	26170787	25880549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
WTC11_00059008	chr21	-	3425	4	FSM	ENSG00000142192.21	ENST00000491395.5	619	4	-14	-2792	0	2792	multi-exon	FALSE	canonical	3	553	junction_1	230.46378360939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAGGCTGAGAGCTT	-26049728	True	NA	-47	True	AATAAA	-13	NA	26051032	25994395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25997417_26000014_26000183_26021839_26022043_26050999
WTC11_00059009	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	80.129062559515	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	-26568760	True	NA	-5	True	AATAAA	-31	NA	26573255	26466208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
WTC11_00059010	chr21	-	3106	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	-7	0	0	multi-exon	FALSE	canonical	3	100	junction_1	122.817841628251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	-26568791	True	NA	-5	True	AATAAA	-31	NA	26573286	26466208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
WTC11_00059012	chr21	-	4066	9	FSM	ENSG00000154734.16	ENST00000678221.1	4042	9	0	-24	0	-16	multi-exon	FALSE	canonical	2	5	junction_8	59.2282396750064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAAGAGCTTTCAGTTC	-26843053	False	NA	NA	False	CATAAA	-5	NA	26843073	26835770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26842989
WTC11_00059013	chr21	-	5183	9	FSM	ENSG00000154734.16	ENST00000284984.8	5183	9	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_4	20.9284495364563	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGATGCTTTTTGAAT	-26838210	True	NA	NA	False	ATTAAA	-16	NA	26845409	26835754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26844224
WTC11_00059014	chr21	-	4999	8	FSM	ENSG00000154734.16	ENST00000676955.1	4975	8	0	-24	0	-16	multi-exon	FALSE	canonical	1	2	junction_5	64.3406114807303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAAGAGCTTTCAGTTC	-26838210	True	NA	NA	False	CATAAA	-5	NA	26845409	26835770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26841857_26841991_26842338_26842686_26844224
WTC11_00059016	chr21	-	9622	8	FSM	ENSG00000154736.6	ENST00000284987.6	9621	8	0	-1	0	1	multi-exon	FALSE	canonical	1	4	junction_5	3.95897327444315	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGTATGTACTGCATA	-26966984	True	NA	-39	True	AATAAA	-18	NA	26967088	26917920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26924621_26929885_26930062_26932003_26932180_26932860_26933045_26934465_26934750_26943379_26943548_26954738_26954872_26965287
WTC11_00059017	chr21	-	2276	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	-15	-968	-15	968	multi-exon	FALSE	canonical	3	18	junction_1	30.9659310999829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAGGTAATTCTT	-28883901	True	NA	0	True	ATTAAA	-14	NA	28885386	28871222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
WTC11_00059018	chr21	-	5746	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	-2	-963	-2	963	multi-exon	FALSE	canonical	3	31	junction_2	32.2722791262099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACCCAGTCTCAGGTAA	-28883888	True	NA	-5	True	ATTAAA	-9	NA	28885373	28871227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
WTC11_00059019	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	15.4272486205415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883882	True	NA	-10	True	AATAAA	-17	NA	28885367	28872190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
WTC11_00059020	chr21	-	7691	31	NNC	ENSG00000198862.14	novel	7677	30	NA	NA	11	641	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.8073689768898	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	-28988233	True	NA	NA	False	NA	NA	NA	28992866	28927502	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_28927531_28928146_28930511_28931154_28931323_28932469_28932665_28935108_28935330_28936525_28936698_28941219_28941407_28943261_28943337_28943666_28943905_28944382_28944597_28945806_28945952_28946151_28946288_28947463_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
WTC11_00059021	chr21	-	8088	30	FSM	ENSG00000198862.14	ENST00000361371.10	7677	30	3	-414	3	414	multi-exon	FALSE	canonical	2	77	junction_19	14.5434688137577	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGATCACCTGAGGTC	-28988241	True	NA	NA	False	NA	NA	NA	28992874	28927729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28930511_28931154_28931323_28932469_28932665_28935108_28935330_28936525_28936698_28941219_28941407_28943261_28943337_28943666_28943905_28944382_28944597_28945806_28945952_28946151_28946288_28947463_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
WTC11_00059022	chr21	-	581	3	FSM	ENSG00000198862.14	ENST00000475344.1	696	3	115	0	115	0	multi-exon	FALSE	canonical	1	3	junction_1	62.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACATTTGTCTGCTCTG	NA	False	NA	NA	False	TATAAA	-11	NA	28960706	28958449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28958540_28959396_28959698_28960516
WTC11_00059023	chr21	-	3065	5	FSM	ENSG00000156253.7	ENST00000493196.2	3065	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	23.092206477511	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGTTTTATAAGTTT	-29018214	True	NA	NA	False	CATAAA	-15	NA	29019349	29004383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29019210
WTC11_00059024	chr21	-	1789	6	FSM	ENSG00000156253.7	ENST00000486719.5	1789	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	42.5788679981044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018215	True	NA	0	True	AATAAA	-16	NA	29019350	29005758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29009594_29009693_29019210
WTC11_00059025	chr21	-	1625	4	FSM	ENSG00000156253.7	ENST00000286777.6	1625	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	44.1537717024894	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018217	True	NA	0	True	AATAAA	-16	NA	29019352	29005758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29006652_29007760_29008124_29008394_29008622_29019210
WTC11_00059026	chr21	-	1787	4	FSM	ENSG00000156253.7	ENST00000472184.1	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	12.2836838484589	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018224	True	NA	0	True	AATAAA	-16	NA	29019359	29005758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29006652_29007760_29008124_29008239_29008622_29019210
WTC11_00059028	chr21	-	595	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	12	29	12	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTCAGAATAAAAAACGC	-29024854	True	NA	NA	False	NA	NA	NA	29024878	29024283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29024300_29024900
WTC11_00059029	chr21	-	1326	5	FSM	ENSG00000156261.13	ENST00000496121.5	1326	5	0	0	0	0	multi-exon	FALSE	canonical	3	3230	junction_2	248.731783252563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	-29062822	False	NA	-14	True	AATAAA	-21	NA	29062867	29056323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127
WTC11_00059030	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	858.206367004666	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	-29043691	True	NA	-14	True	AATAAA	-21	NA	29073639	29056323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
WTC11_00059031	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2789	junction_9	253.92233265392	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-29043700	True	NA	-16	True	AATAAA	-19	NA	29073648	29056325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
WTC11_00059034	chr21	-	7200	29	FSM	ENSG00000156299.14	ENST00000286827.7	7200	29	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_27	14.4939730613121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGGTTCTATGCCTTTT	-31558962	False	NA	0	True	AATAAA	-17	NA	31558977	31118415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31164961_31165066_31182420_31182646_31187000_31187088_31195223_31195306_31202907_31203013_31210044_31210216_31213397_31213473_31217552_31217700_31223405_31223592_31225725_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463982_31464036_31558926
WTC11_00059035	chr21	-	4160	13	FSM	ENSG00000156299.14	ENST00000636887.1	4160	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.0302934842345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	-31160812	True	NA	-42	True	NA	NA	NA	31160909	31118457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31160444
WTC11_00059036	chr21	-	7391	29	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-166	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_27	14.2424344399232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	-31559128	False	NA	-42	True	NA	NA	NA	31559143	31118457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31164961_31165066_31182420_31182646_31187000_31187088_31195223_31195306_31202907_31203013_31210044_31210216_31213397_31213473_31217552_31217700_31223405_31223592_31225725_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
WTC11_00059037	chr21	-	938	3	FSM	ENSG00000156299.14	ENST00000491927.1	938	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	1	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGGAAACAAGAATCTAGA	NA	False	NA	NA	False	NA	NA	NA	31130306	31123938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31124695_31127064_31127153_31130212
WTC11_00059038	chr21	-	1144	4	ISM	ENSG00000156299.14	ENST00000541036.6	7218	28	25	147878	25	-53665	5prime_fragment	FALSE	canonical	1	3	junction_3	11.1455023315337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAGCCAATTCCTTGG	-31344049	True	NA	NA	False	NA	NA	NA	31344236	31266295	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_31266984_31276731_31276909_31339242_31339423_31344137
WTC11_00059039	chr21	-	4964	20	FSM	ENSG00000156304.15	ENST00000286835.12	4269	20	43	-738	0	738	multi-exon	FALSE	canonical	3	215	junction_2	44.2043228730496	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCCTTGAAGTTGTT	-31723978	True	NA	NA	False	NA	NA	NA	31732075	31670261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31672355_31685048_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
WTC11_00059040	chr21	-	4127	20	FSM	ENSG00000156304.15	ENST00000399804.5	4127	20	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_2	61.1938023041812	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTGTGCTATTCTT	-31723978	True	NA	82	True	AATAAA	-19	NA	31732075	31671032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31672355_31685048_31685175_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
WTC11_00059041	chr21	-	1435	7	FSM	ENSG00000156304.15	ENST00000485790.1	1282	7	-157	4	0	-4	multi-exon	FALSE	canonical	3	302	junction_1	36.5680491990238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTGAAAAAAAAAAAAAAA	-31724021	True	NA	NA	False	ATTAAA	-2	NA	31732118	31700762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
WTC11_00059042	chr21	-	267	1	FSM	ENSG00000261610.1	ENST00000565959.1	1782	1	908	607	908	-607	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTGTCTCACACCTGA	-32260622	False	NA	NA	False	NA	NA	NA	32260677	32260410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32260400_32260700
WTC11_00059043	chr21	-	1567	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	-21	0	21	multi-exon	FALSE	canonical	3	1311	junction_1	7.0178344238091	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTGAATTGTATTTAAC	-32269316	True	NA	-1	True	AATAAA	-34	NA	32279049	32268206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
WTC11_00059044	chr21	-	319	2	FSM	ENSG00000159055.4	ENST00000486363.1	368	2	49	0	49	0	multi-exon	FALSE	canonical	3	1330	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGGAAGAGTGTGCTT	-32270493	False	NA	NA	False	NA	NA	NA	32270529	32269607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32269804_32270406
WTC11_00059045	chr21	-	10831	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	-13	0	13	multi-exon	FALSE	canonical	3	68	junction_27	28.5947421701682	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTTAGCAGCCGA	-32386812	True	NA	NA	False	ATTAAA	-34	NA	32393012	32311004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
WTC11_00059046	chr21	-	7847	39	NNC	ENSG00000142207.7	novel	10818	39	NA	NA	-11	-3047	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	33.1212098652251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTGATTTGACCTCT	-32386823	True	NA	-33	True	ATTAAA	-31	NA	32393023	32314064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322650_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
WTC11_00059047	chr21	-	3515	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	1	0	-1	multi-exon	FALSE	canonical	3	926	junction_5	74.62796616104	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTTCGACCATCAAACT	-32602602	True	NA	NA	False	AATAAA	-18	NA	32612377	32599354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
WTC11_00059048	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	390.038664750048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32602577	True	NA	89	True	AATAAA	-19	NA	32612352	32601666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
WTC11_00059049	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	73.8816621361485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32609960	True	NA	89	True	AATAAA	-19	NA	32612586	32601666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
WTC11_00059051	chr21	-	1872	2	FSM	ENSG00000159079.19	ENST00000483315.1	1872	2	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTATAATTTAAAAAAAAA	-32604126	False	9775	-54	True	NA	NA	NA	32604513	32601809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32603293_32604124
WTC11_00059052	chr21	-	558	4	FSM	ENSG00000159082.18	ENST00000456084.1	583	4	25	0	25	0	multi-exon	FALSE	canonical	3	5	junction_1	3.29983164553722	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGTCTTATGTGTGGAG	-32726902	False	NA	NA	False	NA	NA	NA	32726917	32695225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32695283_32699837_32700106_32701960_32702048_32726771
WTC11_00059053	chr21	-	4746	10	FSM	ENSG00000159086.15	ENST00000497873.1	2277	10	-1438	-1031	-1438	104	multi-exon	FALSE	canonical	3	270	junction_8	122.79140195902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGAACAGTGTCATGCA	-32753533	False	NA	NA	False	NA	NA	NA	32753562	32733794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118
WTC11_00059054	chr21	-	5835	11	ISM	ENSG00000159086.15	ENST00000331923.9	3892	18	13093	-104	-1868	104	3prime_fragment	FALSE	canonical	3	168	junction_10	138.186106392792	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGAACAGTGTCATGCA	-32758609	False	NA	NA	False	NA	NA	NA	32758662	32733794	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229
WTC11_00059055	chr21	-	5725	11	FSM	ENSG00000159086.15	ENST00000466846.5	3879	11	-1845	-1	-1845	0	multi-exon	FALSE	canonical	3	126	junction_10	145.352536957564	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	-32758586	False	NA	NA	False	ATTAAA	-17	NA	32758639	32733898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755212
WTC11_00059056	chr21	-	3892	18	FSM	ENSG00000159086.15	ENST00000331923.9	3892	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	169.51028589505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	32771755	32733898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
WTC11_00059057	chr21	-	3092	3	ISM	ENSG00000159086.15	ENST00000497873.1	2277	10	12182	-925	3326	-1	3prime_fragment	FALSE	canonical	3	596	junction_1	29	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTGTTGTATTTTCC	-32739913	False	NA	NA	False	ATTAAA	-15	NA	32739942	32733900	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_32735068_32737253_32737409_32738172
WTC11_00059059	chr21	-	2564	16	FSM	ENSG00000159086.15	ENST00000290178.4	2564	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	128.457238886029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTACATAAAACTGTG	NA	False	NA	-55	True	NA	NA	NA	32771668	32741392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32741623_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
WTC11_00059062	chr21	-	695	4	FSM	ENSG00000142188.17	ENST00000484377.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.4388208363422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	NA	False	NA	-3	True	AATAAA	-45	NA	33448964	33432484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33432803_33436882_33436993_33439213_33439298_33448781
WTC11_00059063	chr21	-	3063	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	-1	0	1	multi-exon	FALSE	canonical	3	77	junction_1	39.5371660592916	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTCATTATTCCTGCA	-33478327	True	NA	-2	True	NA	NA	NA	33479943	33432483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
WTC11_00059064	chr21	-	923	9	NIC	ENSG00000142188.17	novel	3062	9	NA	NA	-48	27	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	70.9593853905176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAACGAAAATGTTCCC	NA	False	NA	NA	False	AAGAAA	-20	NA	33480022	33432770	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33432803_33436882_33436993_33439213_33439298_33448781_33448880_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
WTC11_00059068	chr21	-	2034	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	-549	0	549	multi-exon	FALSE	canonical	3	33	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACCTCATGATCCACC	-33491468	True	NA	NA	False	NA	NA	NA	33491716	33487505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33489425_33491601
WTC11_00059069	chr21	-	4038	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	38	-758	0	756	multi-exon	FALSE	canonical	3	951	junction_10	319.837402001112	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATCTTTGATCATAT	-33529061	True	NA	-18	True	AATAAA	-41	NA	33542079	33503174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
WTC11_00059070	chr21	-	4235	22	FSM	ENSG00000159131.17	ENST00000381839.7	3469	22	-10	-756	-10	756	multi-exon	FALSE	canonical	2	9	junction_21	430.740658330775	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATCTTTGATCATAT	-33542310	True	NA	-18	True	AATAAA	-41	NA	33542871	33503174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542659
WTC11_00059071	chr21	-	3490	22	FSM	ENSG00000159131.17	ENST00000381831.7	3490	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	431.886721941725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	-33542281	True	NA	-7	True	AATAGA	-45	NA	33542842	33503930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539324_33542586
WTC11_00059073	chr21	-	2154	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	-5	0	5	multi-exon	FALSE	canonical	3	1467	junction_10	114.359127313914	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGATTTCTTTTTTT	-33529096	True	NA	1	True	AATAAA	-20	NA	33542114	33524003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
WTC11_00059080	chr21	-	2406	11	NNC	ENSG00000159147.18	novel	2500	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	81.3402729279906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-33584180	True	NA	-3	True	AATAAA	-19	NA	33588634	33577550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_33577603_33577646_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
WTC11_00059081	chr21	-	2500	10	FSM	ENSG00000159147.18	ENST00000303071.10	2500	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	34.3353109822368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-33584230	True	NA	-3	True	AATAAA	-19	NA	33588684	33577550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
WTC11_00059083	chr21	-	1566	8	FSM	ENSG00000159147.18	ENST00000442660.5	1566	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	93.0205156217198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCATAAAGGTAGAAAATA	-33583148	False	NA	-47	True	NA	NA	NA	33587602	33577941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33584589_33584769_33585977_33586182_33587521
WTC11_00059086	chr21	-	1634	13	FSM	ENSG00000205758.12	ENST00000381554.8	1598	13	0	-36	0	36	multi-exon	FALSE	canonical	0	0	junction_2	97.9731751835958	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGGATCAAAGAAGATCC	-33638844	True	NA	36	True	NA	NA	NA	33641741	33589304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059087	chr21	-	1488	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	-6	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	97.9731751835958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGTATTAATTTTGTAT	-33638850	True	NA	-21	True	GATAAA	-32	NA	33641747	33589460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059088	chr21	-	595	6	FSM	ENSG00000205758.12	ENST00000437996.5	595	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	91.0836977729824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCTTTGGAAATTG	NA	False	NA	-79	True	NA	NA	NA	33602265	33589768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599286_33602233
WTC11_00059089	chr21	-	2069	12	NNC	ENSG00000205758.12	novel	2224	13	NA	NA	-2	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.022833271668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTATTAAATTTGAAAA	-33638864	True	NA	-36	True	ATTAAA	-3	NA	33641761	33594536	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_33595614_33595729_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059090	chr21	-	1026	8	FSM	ENSG00000205758.12	ENST00000440526.5	1026	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	104.959078517608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAATTTCAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	33622042	33595130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33595529_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995
WTC11_00059091	chr21	-	632	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	-5	0	5	multi-exon	FALSE	canonical	3	34	junction_1	114.465016489756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTTTGGAATTTAC	-33638825	True	NA	NA	False	AATAAA	-18	NA	33641722	33616281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059092	chr21	-	2839	6	FSM	ENSG00000241837.7	ENST00000491703.5	2839	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2115.30665389205	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868900	True	NA	-32	True	AATAAA	-20	NA	33915768	33903452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33906448_33907454_33909081_33909212_33912288_33912400_33914449
WTC11_00059093	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	4445	junction_6	387.616505783172	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868936	True	NA	-32	True	AATAAA	-20	NA	33915804	33903452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
WTC11_00059094	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2325.2310923117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	-33868946	True	NA	31	True	AATAAA	-18	NA	33915814	33903454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
WTC11_00059095	chr21	-	415	4	FSM	ENSG00000241837.7	ENST00000418933.1	415	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2426.66451465106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGTTCACTGTCT	-33862227	False	46868	30	True	AATAAA	-17	NA	33909095	33903455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903657_33903934_33904022_33907340_33907454_33909081
WTC11_00059097	chr21	-	500	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	92	0	92	0	multi-exon	FALSE	canonical	3	35	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTATTTGGTAATACGT	-33968294	True	NA	-13	True	AATAAA	-19	NA	33968481	33967099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33967351_33968232
WTC11_00059098	chr21	-	753	1	FSM	ENSG00000224598.1	ENST00000415238.1	640	1	-59	-54	-59	54	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	34136130	34135377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_34135400_34136100
WTC11_00059099	chr21	-	2391	4	FSM	ENSG00000159200.18	ENST00000381132.6	2408	4	7	10	7	-10	multi-exon	FALSE	canonical	2	3	junction_3	19.5675468285856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGAAAAGTTGTCATTT	-34526892	True	NA	-11	True	AATAAA	-18	NA	34526956	34516493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34526662
WTC11_00059102	chr21	-	4278	10	FSM	ENSG00000185917.14	ENST00000399215.5	4272	10	0	-6	0	6	multi-exon	TRUE	canonical	3	86	junction_4	102.858046733242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCTTTCCTTGTCCA	-36060247	False	NA	-8	True	ATTAAA	-23	NA	36060261	36034534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815
WTC11_00059104	chr21	-	2997	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	-6	0	6	multi-exon	FALSE	canonical	3	86	junction_5	95.8969832943596	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCTTTCCTTGTCCA	-36057237	True	NA	-8	True	ATTAAA	-23	NA	36060526	36034534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
WTC11_00059107	chr21	-	4348	2	NIC	ENSG00000185917.14	novel	3358	5	NA	NA	2183	0	intron_retention	FALSE	canonical	3	195	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATTGTGCTTTCC	-36041175	False	NA	-15	True	ATTAAA	-16	NA	36041190	36034541	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36038274_36040574
WTC11_00059108	chr21	-	3365	5	FSM	ENSG00000185917.14	ENST00000487297.5	3358	5	0	-7	0	6	multi-exon	FALSE	canonical	3	160	junction_2	20.6276513447363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCTTTCCTTGTCCA	-36043358	False	NA	-8	True	ATTAAA	-23	NA	36043373	36034534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806
WTC11_00059109	chr21	-	3409	11	NIC	ENSG00000185917.14	novel	3258	12	NA	NA	-248	-2	intron_retention	FALSE	canonical	3	64	junction_10	114.813109007639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGGTCATTGTGCTTT	-36060760	False	NA	-17	True	ATTAAA	-14	NA	36060774	36034543	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
WTC11_00059114	chr21	-	1270	7	NIC	ENSG00000185917.14	novel	3258	12	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	113.283812710476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACATATCACTAATTTTC	-36057237	True	NA	-1	True	AATAAA	-23	NA	36060526	36043677	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
WTC11_00059115	chr21	-	1217	7	ISM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	9141	0	4	5prime_fragment	FALSE	canonical	3	300	junction_5	41.7119753654618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACATACATATCACTAAT	-36057237	True	NA	-5	True	AATAAA	-19	NA	36060526	36043681	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
WTC11_00059122	chr21	-	486	1	Genic_Genomic	ENSG00000236830.8	novel	NA	NA	NA	NA	2092	338	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGGACAGAGTATGAGAA	-36131897	False	NA	NA	False	NA	NA	NA	36131914	36131428	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_-_36131400_36131900
WTC11_00059123	chr21	-	845	1	FSM	ENSG00000273199.1	ENST00000608391.1	879	1	29	5	29	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGGATTTGCCCTGAA	-36320299	False	NA	NA	False	AATAAA	-19	NA	36320641	36319796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36319800_36320600
WTC11_00059124	chr21	-	8281	11	FSM	ENSG00000159267.17	ENST00000674895.3	8273	11	1	-9	1	9	multi-exon	FALSE	canonical	3	22	junction_10	10.5114223585583	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTTAAAGACAGTGGAG	-36966283	True	NA	-7	True	AATAAA	-26	NA	36966668	36748616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36966443
WTC11_00059125	chr21	-	8261	12	FSM	ENSG00000159267.17	ENST00000336648.8	6010	12	20	-2271	8	9	multi-exon	FALSE	canonical	3	5	junction_9	17.9254655183509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTTAAAGACAGTGGAG	-36989873	True	NA	-7	True	AATAAA	-26	NA	36990216	36748616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36946008_36946155_36962035_36962171_36990157
WTC11_00059128	chr21	-	2017	5	FSM	ENSG00000185808.14	ENST00000360525.9	707	5	0	-1310	0	-1218	multi-exon	FALSE	canonical	3	111	junction_3	25.5440795488896	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGCAAACAAGAATGCAT	-37071390	True	NA	NA	False	AATAAA	-35	NA	37073071	37064063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072999
WTC11_00059129	chr21	-	2282	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	-1310	0	-1218	multi-exon	FALSE	canonical	3	32	junction_4	59.4252471597721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGCAAACAAGAATGCAT	-37071489	True	NA	NA	False	AATAAA	-35	NA	37073170	37064063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
WTC11_00059131	chr21	-	3058	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	-2	0	0	multi-exon	FALSE	canonical	3	253	junction_4	29.849281261644	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTTTCCTTAGAGAA	-37262913	True	NA	NA	False	AATAAA	-22	NA	37267334	37223419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
WTC11_00059133	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	94.0703046780557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-37262925	True	NA	-73	True	NA	NA	NA	37267346	37225471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
WTC11_00059137	chr21	-	856	3	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTTGTGCTGTACGTGC	NA	False	NA	NA	False	NA	NA	NA	37592569	37582908	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_37582975_37591653_37591823_37591948
WTC11_00059138	chr21	-	1021	8	NNC	ENSG00000183527.12	novel	1754	7	NA	NA	0	8356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	323.798753322278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACAAATGGCCAATAG	-39183373	False	NA	NA	False	NA	NA	NA	39183385	39166412	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_39166438_39175460_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
WTC11_00059139	chr21	-	711	1	FSM	ENSG00000235701.1	ENST00000437262.1	977	1	10	256	10	-256	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGGATGCATCTGCTC	-39172059	False	NA	NA	False	NA	NA	NA	39172096	39171385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39171400_39172100
WTC11_00059140	chr21	-	1984	3	FSM	ENSG00000183527.12	ENST00000481921.5	716	3	-543	-725	-543	36	multi-exon	FALSE	canonical	3	889	junction_1	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGTGGAGTTAAAT	-39179351	False	NA	NA	False	AATAAA	-3	NA	39179363	39174732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39175665_39177434_39177572_39178448
WTC11_00059141	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	80.745828925641	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-39173930	True	NA	NA	False	NA	NA	NA	39183451	39174768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
WTC11_00059143	chr21	-	907	6	FSM	ENSG00000183527.12	ENST00000380900.2	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	367.230499822659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-39173967	True	NA	NA	False	AAGAAA	-43	NA	39183488	39175589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39180284_39180437_39181771_39181879_39183251
WTC11_00059144	chr21	-	10141	42	FSM	ENSG00000185658.14	ENST00000333229.6	10141	42	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	49.4164880590279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCGCTGTATTTCTTGC	-39313806	False	NA	-2	True	AGTAAA	-22	NA	39313819	39184175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39187418_39196497_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
WTC11_00059145	chr21	-	17728	41	FSM	ENSG00000185658.14	ENST00000342449.8	17728	41	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_18	48.2231207513574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCATGGGGTTTGATTTT	-39305387	True	NA	-5	True	AATAAA	-16	NA	39313632	39185481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
WTC11_00059147	chr21	-	2495	5	FSM	ENSG00000185658.14	ENST00000341322.4	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	5.80409338312195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	-39305397	True	NA	39	True	AATAAA	-18	NA	39313642	39296436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
WTC11_00059149	chr21	-	1320	7	FSM	ENSG00000205581.11	ENST00000288344.14	1303	7	0	-17	0	17	multi-exon	FALSE	canonical	3	76	junction_3	2272.36814799011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGGTTTAAATTTT	-39348937	False	NA	15	True	AATAAA	-36	NA	39348991	39342297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544_39348578_39348902
WTC11_00059150	chr21	-	4316	5	FSM	ENSG00000205581.11	ENST00000486741.5	4299	5	0	-17	0	17	multi-exon	FALSE	canonical	3	4768	junction_4	459.574463498572	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGGTTTAAATTTT	-39255524	True	NA	15	True	AATAAA	-36	NA	39349099	39342297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39348340_39348421_39348452_39348544_39348578_39348902
WTC11_00059151	chr21	-	1569	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	-17	0	17	multi-exon	FALSE	canonical	3	45	junction_3	2443.93363916721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGGTTTAAATTTT	-39255565	True	NA	15	True	AATAAA	-36	NA	39349140	39342297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
WTC11_00059152	chr21	-	1416	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	-129	-16	-77	16	multi-exon	FALSE	canonical	3	4768	junction_5	422.739446941021	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTCTGGTTTAAATTT	-39349163	False	NA	14	True	AATAAA	-35	NA	39349217	39342298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
WTC11_00059168	chr21	-	4358	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	-156	0	156	multi-exon	FALSE	canonical	3	94	junction_1	68	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTAACTTGAGTTTT	-39612872	False	NA	NA	False	NA	NA	NA	39612910	39602686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39606348_39609582_39609666_39612296
WTC11_00059170	chr21	-	318	2	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCATGGGCTCAGAG	NA	False	NA	NA	False	NA	NA	NA	40960592	40954796	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_40954885_40960362
WTC11_00059171	chr21	-	3450	14	FSM	ENSG00000184012.14	ENST00000332149.10	3450	14	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_13	17.624955411417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
WTC11_00059172	chr21	-	3240	14	FSM	ENSG00000184012.14	ENST00000398585.7	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	15.9470276950814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-41507457	True	NA	NA	False	AATAAA	-24	NA	41508065	41464552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507949
WTC11_00059173	chr21	-	2994	13	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	15	-8	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	22.274175380671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGTAACTACTGCATC	-41508029	False	NA	NA	False	AATAAA	-16	NA	41508050	41464560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41498118_41498190_41507949
WTC11_00059174	chr21	-	1427	13	FSM	ENSG00000184012.14	ENST00000424093.6	1427	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	21.7325920118967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATGGTCTTCGTCCTT	-41507484	True	NA	NA	False	AAGAAA	-45	NA	41508092	41466141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41508080
WTC11_00059175	chr21	-	217	4	FSM	ENSG00000184012.14	ENST00000463138.1	217	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	17.5562587763516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGAGTGCGACTCCTCAG	-41507506	True	NA	NA	False	NA	NA	NA	41508114	41488488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41488514_41489506_41489594_41498118_41498190_41508080
WTC11_00059176	chr21	-	3835	8	FSM	ENSG00000183421.12	ENST00000332512.8	3831	8	0	-4	0	0	multi-exon	FALSE	canonical	3	61	junction_4	9.26481163833769	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTGCTTTTTCTTA	-41765937	True	NA	-1	True	AATAAA	-31	NA	41767052	41739368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41741998_41743881_41744141_41745758_41745863_41746612_41746772_41749153_41749204_41751096_41751246_41756524_41756817_41766859
WTC11_00059177	chr21	-	6527	24	FSM	ENSG00000141956.14	ENST00000398548.6	6525	24	0	-2	0	2	multi-exon	TRUE	canonical	2	16	junction_23	5.85198655944043	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTTCTGCTCCCGCT	-41878457	True	NA	-3	True	AATAAA	-27	NA	41879344	41798222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41835436_41835525_41836112_41836208_41836467_41836650_41837933_41838064_41839622_41839854_41847089_41847192_41854565_41854819_41857175_41857330_41859591_41859686_41860326_41860373_41879269
WTC11_00059178	chr21	-	696	6	FSM	ENSG00000141956.14	ENST00000495217.1	703	6	7	0	7	0	multi-exon	FALSE	canonical	3	26	junction_3	5.29150262212918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGAAGGGAAGCACGGG	-41819764	False	NA	NA	False	NA	NA	NA	41819776	41802893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581
WTC11_00059179	chr21	-	6468	14	FSM	ENSG00000157617.17	ENST00000380486.4	6473	14	7	-2	7	2	multi-exon	FALSE	canonical	3	25	junction_8	6.56780744804202	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGTTTTTCCCGAGT	-41953412	True	NA	-3	True	AATAAA	-21	NA	41954011	41885109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41889345_41899052_41899363_41901621_41901750_41905723_41905838_41906991_41907167_41907659_41907785_41909458_41909524_41912331_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
WTC11_00059180	chr21	-	761	6	FSM	ENSG00000157617.17	ENST00000490479.1	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.96988664825584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAAAGGCAGCTCTTAG	NA	False	NA	NA	False	NA	NA	NA	41942160	41912159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146
WTC11_00059181	chr21	-	6846	4	FSM	ENSG00000173276.14	ENST00000398505.7	6846	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTCAATGGTATGCC	-42008627	True	NA	0	True	AATAAA	-23	NA	42010357	41986830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41991890_41992492_41994109_42002896_42002962_42010251
WTC11_00059182	chr21	-	7473	3	FSM	ENSG00000173276.14	ENST00000310826.10	7452	3	0	-21	0	21	multi-exon	FALSE	canonical	3	5	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTTGATAGTAACCGG	-42008630	True	NA	21	True	AATAAA	-44	NA	42010360	41986809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41994109_42002896_42002962_42010251
WTC11_00059183	chr21	-	5591	2	FSM	ENSG00000173276.14	ENST00000398511.3	5608	2	17	0	-4	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATGCCGTTCTGGTT	-42008640	True	NA	-7	True	AATAAA	-18	NA	42010370	41988636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41994109_42010251
WTC11_00059185	chr21	-	420	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGAGGTTGTGCTTT	-42313373	True	NA	0	True	AATAAA	-41	NA	42313686	42312051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42312270_42313484
WTC11_00059187	chr21	-	2161	1	Genic_Genomic	ENSG00000225218.1	novel	NA	NA	NA	NA	-1082	-4359	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAATGGCCATAGCATTG	-42837542	False	NA	NA	False	NA	NA	NA	42837559	42835398	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_-_42835400_42837600
WTC11_00059188	chr21	-	1477	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	-6	0	6	multi-exon	FALSE	canonical	3	251	junction_1	60.2767721116381	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATTTACATTATTAAGTG	-42874548	True	NA	-22	True	AGTAAA	-21	NA	42879531	42843087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
WTC11_00059189	chr21	-	7840	12	NNC	ENSG00000160193.12	novel	1471	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	118.833309185181	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-42874548	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_42848606_42848995_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
WTC11_00059190	chr21	-	1180	10	NNC	ENSG00000160193.12	novel	1471	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	154.863938688685	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTGAGATTTACATT	-42874532	True	NA	-30	True	AGTAAA	-13	NA	42879515	42843095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854624_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
WTC11_00059192	chr21	-	1856	9	NIC	ENSG00000160193.12	novel	2106	11	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_6	116.646903087909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	-42874576	True	NA	-1	True	AATATA	-14	NA	42879559	42849225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
WTC11_00059197	chr21	-	2957	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-183	0	-183	0	multi-exon	FALSE	canonical	3	133	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	-42925800	False	NA	-7	True	ATTAAA	-17	NA	42925813	42916802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42919292_42925345
WTC11_00059198	chr21	-	274	1	FSM	ENSG00000264580.1	ENST00000579137.1	87	1	-193	6	-193	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCCTAGGATCTTATG	-42951182	False	NA	NA	False	NA	NA	NA	42951207	42950933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42950900_42951200
WTC11_00059199	chr21	-	3964	14	FSM	ENSG00000160200.18	ENST00000461686.5	2656	14	0	-1308	0	1308	multi-exon	FALSE	canonical	3	263	junction_13	541.359257936766	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTAATTTTTGTATT	-43068312	False	NA	NA	False	NA	NA	NA	43068404	43051882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43067777
WTC11_00059200	chr21	-	3761	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	-1308	0	1308	multi-exon	FALSE	canonical	3	142	junction_16	525.313950027743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTAATTTTTGTATT	-43075739	False	NA	NA	False	NA	NA	NA	43075831	43051882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
WTC11_00059201	chr21	-	3803	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	-1308	0	1308	multi-exon	FALSE	canonical	3	1625	junction_13	236.173524328511	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTAATTTTTGTATT	-43075743	False	NA	NA	False	NA	NA	NA	43075835	43051882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
WTC11_00059202	chr21	-	3563	18	FSM	ENSG00000160200.18	ENST00000359624.7	2353	18	98	-1308	24	1308	multi-exon	FALSE	canonical	3	41	junction_17	595.333345603573	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTAATTTTTGTATT	-43076172	False	NA	NA	False	NA	NA	NA	43076264	43051882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
WTC11_00059203	chr21	-	3777	17	FSM	ENSG00000160200.18	ENST00000352178.9	2583	17	114	-1308	24	1308	multi-exon	FALSE	canonical	3	41	junction_16	547.807048603794	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTAATTTTTGTATT	-43076172	False	NA	NA	False	NA	NA	NA	43076264	43051882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
WTC11_00059206	chr21	-	1515	6	FSM	ENSG00000160200.18	ENST00000491776.1	1515	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	841.166570900199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCATCACAACAGCCCT	-43060505	False	NA	NA	False	ATTAAA	-2	NA	43060520	43055071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43056100_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440
WTC11_00059214	chr21	-	978	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	-12	0	12	multi-exon	FALSE	canonical	3	279	junction_6	1982.79931142186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTGTGGAAGTTC	-43101200	False	NA	NA	False	AATAAA	-32	NA	43107524	43092943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
WTC11_00059215	chr21	-	4706	7	FSM	ENSG00000160201.12	ENST00000475639.5	4694	7	0	-12	0	12	multi-exon	FALSE	canonical	3	4218	junction_5	691.723130225446	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTGTGGAAGTTC	-43101200	False	NA	NA	False	AATAAA	-32	NA	43107524	43092943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43104403_43107450
WTC11_00059216	chr21	-	952	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	-12	0	12	multi-exon	FALSE	canonical	3	2363	junction_5	1553.2902799791	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTGTGGAAGTTC	-43101241	True	NA	NA	False	AATAAA	-32	NA	43107565	43092943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
WTC11_00059217	chr21	-	957	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	-12	0	12	multi-exon	FALSE	canonical	3	3780	junction_6	906.719473752292	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTGTGGAAGTTC	-43101246	True	NA	NA	False	AATAAA	-32	NA	43107570	43092943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
WTC11_00059221	chr21	-	370	3	FSM	ENSG00000142178.9	ENST00000644276.1	471	3	0	101	0	-101	multi-exon	FALSE	canonical	3	13	junction_2	2.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGTCAGCTTGCCTT	NA	False	NA	NA	False	CATAAA	-11	NA	43427092	43425406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43425524_43426022_43426193_43427009
WTC11_00059222	chr21	-	2364	2	FSM	ENSG00000160213.9	ENST00000640406.1	2354	2	0	-10	0	0	multi-exon	FALSE	canonical	3	1307	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	-43748026	True	NA	-6	True	AATAAA	-14	NA	43776318	43772510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43774760_43776203
WTC11_00059223	chr21	-	1258	3	FSM	ENSG00000160213.9	ENST00000675996.1	1258	3	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_2	607.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCACGCACTTTATGC	-43748038	True	NA	22	True	AGTAAA	-37	NA	43776330	43773665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43774331_43774657_43774760_43775839
WTC11_00059224	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	-43748016	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43774331_43774657_43774760_43776203
WTC11_00059225	chr21	-	7080	7	FSM	ENSG00000160223.17	ENST00000407780.7	7080	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.34370962471642	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCATTATCTGTTTAGG	NA	False	NA	NA	False	AATAAA	-25	NA	44240945	44222990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44229045_44230053_44230090_44231279_44231445_44235271_44235563_44236866_44237218_44238447_44238489_44240803
WTC11_00059226	chr21	-	4539	2	FSM	ENSG00000160226.16_ENSG00000241728.5	ENST00000478674.1	485	2	-77	-3977	-77	959	multi-exon	FALSE	canonical	3	56	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGACTGCCCAGGGGCC	-44333514	False	NA	NA	False	NA	NA	NA	44333541	44327984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44332015_44333032
WTC11_00059227	chr21	-	2221	7	FSM	ENSG00000160226.16	ENST00000339818.9	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	7.04745817062199	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCGTTTTAAATTGAG	-44339363	False	NA	-2	True	AGTAAA	-19	NA	44339390	44328943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
WTC11_00059228	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	11.5674351329738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339375	False	NA	-12	True	AATAAA	-17	NA	44339402	44329890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
WTC11_00059230	chr21	-	1375	1	FSM	ENSG00000227999.1	ENST00000445440.1	1375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAGTTACAATAAAAATC	NA	False	NA	NA	False	NA	NA	NA	44475097	44473722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44473700_44475100
WTC11_00059231	chr21	-	1765	5	NNC	ENSG00000184900.16	novel	1740	4	NA	NA	0	83193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	558.911442001325	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCGGGCGTGGTGGCAT	-44806171	True	NA	NA	False	AATACA	-25	NA	44818062	44722423	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_44722449_44805616_44807041_44809046_44809119_44813975_44814105_44817947
WTC11_00059232	chr21	-	3313	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	54	0	-54	multi-exon	FALSE	canonical	3	494	junction_2	34.9536836399256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCTTGTTACTTAGC	-44792589	True	NA	-53	True	NA	NA	NA	44801820	44768633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
WTC11_00059233	chr21	-	4340	2	FSM	ENSG00000184787.19	ENST00000481546.1	4340	2	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCCTTTGTCGTA	-44775385	False	NA	-1	True	AATAAA	-25	NA	44775436	44769039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546
WTC11_00059238	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	26.1278905896872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-44792570	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
WTC11_00059240	chr21	-	1515	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	-3	0	3	multi-exon	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTTTCCCCATCTCT	-44792577	True	NA	NA	False	AATAAA	-21	NA	44801808	44799986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44801399_44801705
WTC11_00059242	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_3	7.36357401145817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806171	True	NA	-34	True	AGTAAA	-20	NA	44818062	44805616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
WTC11_00059243	chr21	-	1921	4	FSM	ENSG00000184900.16	ENST00000411651.6	1921	4	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	600.614315143716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806238	True	NA	-34	True	AGTAAA	-20	NA	44818129	44805616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44807041_44809046_44809119_44813861_44814105_44817947
WTC11_00059244	chr21	-	520	4	FSM	ENSG00000184900.16	ENST00000397893.3	520	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	603.406625382549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTGGGATTAAAGGC	-44806077	True	NA	NA	False	NA	NA	NA	44817968	44808270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44808569_44809046_44809119_44813975_44814105_44817947
WTC11_00059246	chr21	-	2413	4	FSM	ENSG00000183255.12	ENST00000397887.7	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	435.836615666416	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGTGTTCCTGTGTTC	-44865435	True	NA	-2	True	AATAAA	-29	NA	44873709	44849584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44851628_44861162_44861272_44865394_44865448_44873501
WTC11_00059247	chr21	-	2615	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	-15	0	2	multi-exon	FALSE	canonical	3	854	junction_2	33.2686038180144	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTTCCTGTGTTCCA	-44865416	True	NA	0	True	AATAAA	-31	NA	44873690	44849582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
WTC11_00059248	chr21	-	270	1	FSM	ENSG00000273027.1	ENST00000609461.1	460	1	-165	355	-165	-355	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTGGGGTTTCTGGT	-44929956	False	NA	NA	False	NA	NA	NA	44930277	44930007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44930000_44930300
WTC11_00059249	chr21	-	2354	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	68	-19	-28	19	multi-exon	FALSE	canonical	1	5	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTCTAGGTCACTGGG	-44939552	True	NA	NA	False	NA	NA	NA	44939873	44933287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44935097_44935626_44935891_44939592
WTC11_00059250	chr21	-	2887	10	NNC	ENSG00000186866.17	novel	3077	10	NA	NA	0	57367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.3388517946129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGAGAAGATATTGAGG	-45286035	True	NA	NA	False	NA	NA	NA	45287892	45206560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_45206593_45263937_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
WTC11_00059252	chr21	-	2868	9	FSM	ENSG00000186866.17	ENST00000349485.10	2861	9	0	-7	0	0	multi-exon	FALSE	canonical	3	108	junction_1	25.5633404507314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-45286038	True	NA	-12	True	AATAAA	-21	NA	45287895	45263927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
WTC11_00059253	chr21	-	3077	10	FSM	ENSG00000186866.17	ENST00000334538.13	3077	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	56.4348198268488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-45286041	True	NA	-12	True	AATAAA	-21	NA	45287898	45263927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45265636_45266021_45266228_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
WTC11_00059255	chr21	-	4822	8	FSM	ENSG00000186866.17	ENST00000331343.11	4825	8	3	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	23.9386972178896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-45286038	True	NA	-12	True	AATAAA	-21	NA	45287895	45263927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
WTC11_00059259	chr21	-	682	1	FSM	ENSG00000273796.1	ENST00000617004.1	561	1	-127	6	-127	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGCATAGAGTAGAAG	-45404481	False	NA	-8	True	AATAAA	-11	NA	45404496	45403814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45403800_45404500
WTC11_00059260	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.7891502493096	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-45536776	True	NA	-21	True	AATACA	-1	NA	45542440	45512564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
WTC11_00059261	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.871683995112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45536807	True	NA	-5	True	ATTAAA	-15	NA	45542471	45514714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
WTC11_00059262	chr21	-	3137	6	NNC	ENSG00000173638.19	novel	4991	6	NA	NA	-157	0	intron_retention	FALSE	canonical	0	0	junction_4	103.288721552743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45542598	True	NA	-5	True	ATTAAA	-15	NA	45542628	45514714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542259
WTC11_00059264	chr21	-	891	1	FSM	ENSG00000275139.1	ENST00000617854.1	3955	1	154	2910	154	-2910	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGACCAGCCGGGCCA	NA	False	NA	NA	False	NA	NA	NA	45763604	45762713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45762700_45763600
WTC11_00059265	chr21	-	1196	5	NNC	ENSG00000160284.15	novel	1182	4	NA	NA	0	3979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.253108087221	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAAGTGGGGCTGGGCTC	-46175986	True	NA	NA	False	AAAAAG	-3	NA	46184476	46157168	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46157196_46161160_46161706_46161915_46162068_46168307_46168659_46184355
WTC11_00059266	chr21	-	1182	4	FSM	ENSG00000160284.15	ENST00000330205.10	1182	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	40.0998753115268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCTCTTTGAGGGCG	-46175986	True	NA	1	True	ATTAAA	-27	NA	46184476	46161147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46161706_46161915_46162068_46168307_46168659_46184355
WTC11_00059267	chr21	-	2143	3	FSM	ENSG00000160285.15	ENST00000491729.1	2143	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	260.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	-46193472	False	NA	-1	True	ATTAAA	-17	NA	46193487	46188445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46188822_46191075_46191236_46191880
WTC11_00059268	chr21	-	4928	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	-44	2	4	-2	multi-exon	TRUE	canonical	3	282	junction_21	55.9636665416868	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAATTCAGATTAT	-46227391	True	NA	-3	True	ATTAAA	-15	NA	46228818	46188447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
WTC11_00059269	chr21	-	3602	2	FSM	ENSG00000160285.15	ENST00000474319.1	3601	2	0	-1	0	0	multi-exon	FALSE	canonical	3	541	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	-46193355	False	NA	-6	True	AATAAA	-26	NA	46193370	46189123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46191236_46191880
WTC11_00059270	chr21	-	4388	21	FSM	ENSG00000160285.15	ENST00000457828.6	4390	21	2	0	0	0	multi-exon	FALSE	canonical	3	451	junction_5	28.111341127737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	-46227395	True	NA	-6	True	AATAAA	-26	NA	46228822	46189123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
WTC11_00059271	chr21	-	4129	21	NIC	ENSG00000160285.15	novel	4886	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_4	106.072746264062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	-46227335	False	NA	-7	True	AATAAA	-25	NA	46228762	46189124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
WTC11_00059278	chr21	-	5145	18	FSM	ENSG00000160294.11	ENST00000486937.5	4593	18	-552	0	-552	0	multi-exon	FALSE	canonical	3	221	junction_17	40.0202370952826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	NA	False	NA	-7	True	GATAAA	-15	NA	46268614	46235132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981
WTC11_00059279	chr21	-	6403	28	FSM	ENSG00000160294.11	ENST00000291688.6	6403	28	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_26	49.7826000750583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46285583	False	NA	-7	True	GATAAA	-15	NA	46285611	46235132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067
WTC11_00059280	chr21	-	6770	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_28	58.0439115090059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46278519	True	NA	-7	True	GATAAA	-15	NA	46286282	46235132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285698
WTC11_00059281	chr21	-	6333	29	FSM	ENSG00000160294.11	ENST00000397708.1	6333	29	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_28	66.7138555354745	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46278534	True	NA	-7	True	GATAAA	-15	NA	46286297	46235132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46286150
WTC11_00059286	chr21	-	4739	8	NNC	ENSG00000160298.18	novel	2941	9	NA	NA	0	28	intron_retention	FALSE	canonical	3	17	junction_7	19.1076435181402	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAAAAAAAAAAAGGGA	-46321374	True	NA	21	True	AATAAA	-45	NA	46323869	46301101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317349_46318011_46318221_46321145
WTC11_00059287	chr21	-	4269	7	FSM	ENSG00000160298.18	ENST00000397679.5	2900	7	-1369	0	319	0	multi-exon	FALSE	canonical	3	21	junction_6	18.1146042984352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGTGTATGACGTGA	-46320478	False	NA	-11	True	AATAAA	-18	NA	46320506	46301133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317349_46318011
WTC11_00059288	chr21	-	4808	9	NNC	ENSG00000160298.18	novel	2941	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_8	18.3673453443877	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTATGACGTGATCCC	-46321374	True	NA	-7	True	AATAAA	-22	NA	46323869	46301129	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317269_46318011_46318221_46318784_46318962_46321145
WTC11_00059289	chr21	-	2970	8	FSM	ENSG00000160298.18	ENST00000291691.12	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	15.4457576237434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTATGACGTGATCCC	-46321375	True	NA	-7	True	AATAAA	-22	NA	46323870	46301129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46322638
WTC11_00059293	chr21	-	754	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	4	351	4	7	multi-exon	TRUE	canonical	2	5	junction_1	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGCTGTTCTTTAA	-46604924	True	NA	NA	False	TTTAAA	-28	NA	46605078	46598954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46599504_46602277_46602417_46605012
WTC11_00059294	chr21	+	2792	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	8258182	8260974	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8258200_8261000
WTC11_00059295	chr21	+	746	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGGCTCGGGGGGCCCC	8396910	False	NA	NA	False	NA	NA	NA	8396923	8397669	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8396900_8397700
WTC11_00059297	chr21	+	248	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTCTCAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31215307	31215555	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_31215300_31215600
WTC11_00059298	chr21	+	317	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAAATTAGCTGCAGGG	NA	False	NA	NA	False	NA	NA	NA	36492151	36492468	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_36492200_36492500
WTC11_00059299	chr21	+	2081	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCCGTCTCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37587562	37589643	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_37587600_37589600
WTC11_00059302	chr21	+	1013	3	FSM	ENSG00000278903.4	ENST00000688828.1	1395	3	97	285	0	141	multi-exon	FALSE	canonical	3	13	junction_2	46.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCTGGCTAACACGGT	NA	False	NA	NA	False	NA	NA	NA	6318494	6321963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6318605_6320871_6320975_6321163
WTC11_00059310	chr21	+	1074	4	FSM	ENSG00000273590.5	ENST00000624758.3	1074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	7745074	7758629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7745368_7748898_7748988_7754951_7755119_7758104
WTC11_00059318	chr21	+	870	3	NNC	ENSG00000224905.8	novel	578	3	NA	NA	25	563	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	14	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATCACTTTTGAGTTA	14026597	True	NA	-3	True	AATATA	-18	NA	14027445	14089609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_14027598_14083949_14084145_14089086
WTC11_00059319	chr21	+	1581	3	NNC	ENSG00000224905.8	novel	578	3	NA	NA	8	-9129	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	15.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCGATCTCTCTTATCT	14026580	True	NA	NA	False	AATAAA	-16	NA	14027428	14115495	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_14027598_14083949_14084145_14114278
WTC11_00059320	chr21	+	1139	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	8	-63	8	63	multi-exon	FALSE	canonical	1	4	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATACATGAATTTTTAAA	14026580	True	NA	NA	False	AATAAA	-9	NA	14027428	14144531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14143756
WTC11_00059329	chr21	+	1762	10	FSM	ENSG00000154721.15	ENST00000400532.5	1757	10	-5	0	-5	0	multi-exon	FALSE	canonical	1	3	junction_9	13.1909059582729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTTATGTTTCTTTA	25639194	True	NA	NA	False	AATAAA	-16	NA	25639266	25714573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714230
WTC11_00059339	chr21	+	4284	9	FSM	ENSG00000159110.21	ENST00000404220.7	4284	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.3394854109294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTGTCTTCCATTGG	33228308	True	NA	20	True	AATACA	-14	NA	33229970	33265675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33230217_33241839_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
WTC11_00059343	chr21	+	1234	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	-14	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375465	34402777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
WTC11_00059344	chr21	+	1061	4	FSM	ENSG00000205670.12	ENST00000399295.2	1074	4	13	0	13	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	34375616	34389153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34375897_34379427_34379517_34385477_34385645_34388628
WTC11_00059348	chr21	+	3152	2	NNC	ENSG00000233393.2	novel	2336	2	NA	NA	4	613	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGAGTGCTATGTCTTT	36102798	True	NA	NA	False	ATTAAA	-13	NA	36104884	36110303	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_36105331_36107597
WTC11_00059349	chr21	+	628	4	ISM	ENSG00000142197.13	ENST00000693273.1	7053	34	-5	93411	-5	-11603	5prime_fragment	FALSE	canonical	3	14	junction_2	2.35702260395516	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATCGTGGGCCTGCT	36156239	True	NA	NA	False	NA	NA	NA	36156776	36200445	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_36156944_36164707_36164872_36199069_36199252_36200330
WTC11_00059355	chr21	+	7866	45	FSM	ENSG00000182670.13	ENST00000354749.6	9084	45	1216	2	1216	-2	multi-exon	FALSE	canonical	1	30	junction_5	26.9193776406882	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCACTCTTGTCCATT	NA	False	NA	15	True	AATAAA	-23	NA	37087005	37203110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
WTC11_00059361	chr21	+	13131	5	NNC	ENSG00000183778.19	novel	1455	5	NA	NA	-22	64058	intron_retention	FALSE	non_canonical	0	0	junction_4	23.6220236220354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACCACTCAATGTGC	39612806	False	NA	NA	False	NA	NA	NA	39612917	39737195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559_39673135_39737180
WTC11_00059364	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.22335585688414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	41316509	True	NA	NA	False	NA	NA	NA	41316800	41357727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
WTC11_00059367	chr21	+	3006	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	46.4013739020732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513311	True	NA	6	True	AATAAA	-19	NA	42513851	42581426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
WTC11_00059368	chr21	+	7075	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	55.9476541063162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42514512	False	NA	6	True	AATAAA	-19	NA	42514523	42581426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42514718_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42575766_42579801_42580344
WTC11_00059372	chr21	+	6936	11	NNC	ENSG00000160199.15	novel	1429	9	NA	NA	-4110	563	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	65.9242747400379	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTTTCATGCCATTCT	42999765	False	NA	NA	False	CATAAA	-15	NA	42999778	43034494	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_43000955_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
WTC11_00059375	chr21	+	1765	13	NNC	ENSG00000160214.13	novel	2958	13	NA	NA	0	-1189	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	140.81804650762	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCGCTTCAGGTGTGTC	43785040	True	NA	25	True	AATAAA	-26	NA	43789576	43804104	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797425_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
WTC11_00059376	chr21	+	3595	10	FSM	ENSG00000160216.21	ENST00000398061.5	3595	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.8018621673566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAATTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	43882543	43984673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43882616_43903956_43904020_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
WTC11_00059379	chr21	+	1503	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	-6	9	0	3	multi-exon	FALSE	canonical	0	0	junction_5	406.78957705428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCATTCATCTGTGT	44128387	True	NA	NA	False	AATAAA	-20	NA	44133673	44145714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
WTC11_00059387	chr21	+	882	6	NNC	ENSG00000160256.13	novel	880	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	121.904224701197	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44928262	True	NA	-12	True	AATAAA	-42	NA	44939990	44976973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973199_44973266_44976679
WTC11_00059389	chr21	+	2086	1	ISM	ENSG00000197381.17	ENST00000348831.9	6902	11	149895	0	44039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	NA	False	NA	7	True	AATAAA	-18	NA	45224474	45226560	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_45224500_45226600
WTC11_00059394	chr21	+	1513	3	NNC	ENSG00000215424.10	novel	2539	4	NA	NA	827	-45	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	9.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGCCTCTGAGAAAACAAT	46230334	False	NA	NA	False	AATACA	-24	NA	46230350	46242924	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46230528_46240833_46241020_46241774
WTC11_00059395	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	120.932488052908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
WTC11_00059396	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	46284260	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286738_46286869_46287124_46291333
WTC11_00059401	chr21	+	1401	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	70	3683	4	-2	5prime_fragment	FALSE	canonical	3	246	junction_7	164.18344643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGGTATTTGCATTAC	46627866	True	NA	1	True	AATAAA	-14	NA	46635684	46661268	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
WTC11_00059402	chr21	+	1082	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-24	15236	0	0	5prime_fragment	FALSE	canonical	3	263	junction_1	188.620135604753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	46627831	True	NA	NA	False	NA	NA	NA	46635649	46649888	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
WTC11_00059407	chr21	-	2277	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	500	junction_11	547.26015270663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467409	False	NA	NA	False	TATAAA	-14	NA	6467509	6444868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
WTC11_00059420	chr21	-	900	8	FSM	ENSG00000154719.14	ENST00000419219.1	900	8	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_4	325.603991350956	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAGCTTAAAGTTC	-25603907	True	NA	NA	False	NA	NA	NA	25607484	25592811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25592966_25593892_25593959_25597301_25597415_25599798_25599837_25601367_25601468_25603795_25603936_25606448_25606656_25607402
WTC11_00059439	chr21	-	4040	18	NNC	ENSG00000159086.15	novel	3892	18	NA	NA	-216	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	178.202967365459	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	32772008	32733898	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_32735068_32737253_32737409_32738172_32738215_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
WTC11_00059453	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2087.32991163352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868893	True	NA	-32	True	AATAAA	-20	NA	33915761	33903452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
WTC11_00059454	chr21	-	3036	12	NIC	ENSG00000185917.14	novel	2991	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_11	109.918376929324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-36057233	True	NA	-14	True	ATTAAA	-17	NA	36060522	36034540	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
WTC11_00059455	chr21	-	2950	15	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	1	-419	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	123.410299573481	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATGATTTCTTGAACA	-36060370	False	NA	-22	True	AATAAA	-4	NA	36060384	36034960	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36036517_36036681_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043970_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36060346
WTC11_00059456	chr21	-	3313	8	NNC	ENSG00000185917.14	novel	2761	11	NA	NA	-4123	367	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_5	104.910068387069	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTCTTATCTGACAC	-36047760	False	NA	61	True	NA	NA	NA	36047771	36035717	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581
WTC11_00059457	chr21	-	3241	13	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_5	104.845521284094	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATTGTGCTTTCC	-36057237	True	NA	-15	True	ATTAAA	-16	NA	36060526	36034541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
WTC11_00059474	chr21	-	444	2	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAGAAGTTGACAGATG	-42805920	True	NA	NA	False	ATTAAA	-18	NA	42806214	42786578	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_42786794_42805985
WTC11_00059479	chr21	-	2310	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	860	junction_1	371.543437503015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075772	False	NA	NA	False	TATAAA	-14	NA	43075864	43053190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
WTC11_00059485	chr21	-	1634	7	FSM	ENSG00000160226.16	ENST00000397956.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5675468285856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339366	False	NA	-12	True	AATAAA	-17	NA	44339393	44329890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330462_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
WTC11_00059495	chr21	-	6568	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_28	58.3459510163302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46278421	True	NA	-7	True	GATAAA	-15	NA	46286184	46235132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
WTC11_00059496	chr21	-	2961	9	NIC	ENSG00000160298.18	novel	2970	8	NA	NA	169	0	intron_retention	FALSE	canonical	3	22	junction_8	13.9547259020018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGTGTATGACGTGA	-46323660	False	NA	-11	True	AATAAA	-18	NA	46323688	46301133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46318784_46318962_46322638
WTC11_00059497	chr21	-	2655	11	NNC	ENSG00000160298.18	novel	2941	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	18.2211415668723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGTGTATGACGTGA	-46321349	True	NA	-11	True	AATAAA	-18	NA	46323844	46301133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46301714_46301996_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46318784_46318962_46322638_46322768_46322946
WTC11_00059499	chr21	-	4175	9	NNC	ENSG00000160298.18	novel	2941	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	16.6915959392744	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGTGTATGACGTGA	-46321374	True	NA	-11	True	AATAAA	-18	NA	46323869	46301133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46301714_46301996_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46321145
WTC11_00059526	chr21	+	3066	6	NIC	ENSG00000156256.15	novel	3835	17	NA	NA	-10173	-1	intron_retention	FALSE	canonical	3	94	junction_3	17.4974283824795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTTTATTACTGGGA	29041937	False	NA	6	True	AATAAA	-16	NA	29041949	29054487	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
WTC11_00059527	chr21	+	5878	5	NIC	ENSG00000156273.16	novel	692	3	NA	NA	-172	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	46.7513368792808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	29305017	False	NA	13	True	AATAAA	-27	NA	29305030	29346148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_29305323_29321220_29321515_29326058_29327394_29329486_29329694_29342398
WTC11_00059529	chr21	+	1083	2	FSM	ENSG00000184221.13	ENST00000426947.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTACATTTTTTGTCTG	33070930	False	NA	13	True	AATAAA	-16	NA	33070964	33072413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33071686_33072051
WTC11_00059530	chr21	+	2477	11	FSM	ENSG00000159140.21	ENST00000381692.6	2463	11	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	327.268146937645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504149	True	NA	-19	True	AATAAA	-1	NA	33543037	33577481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
WTC11_00059534	chr21	+	400	4	FSM	ENSG00000142197.13	ENST00000492760.1	400	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	7.07106781186548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAAGGGACATGTCCCT	36164298	False	NA	NA	False	NA	NA	NA	36164835	36212048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36164872_36208714_36208905_36211552_36211652_36211973
WTC11_00059538	chr21	+	1312	6	FSM	ENSG00000182093.16	ENST00000649224.1	1292	6	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	180.651044835063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGTATTATCTACTTA	39380166	True	NA	NA	False	TTTAAA	-23	NA	39380393	39397485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390864_39391226_39391477_39391768_39391837_39393165_39393281_39396865
WTC11_00059539	chr21	+	1457	5	FSM	ENSG00000182093.16	ENST00000649822.1	1437	5	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	166.31502487749	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	39380230	False	NA	4	True	AGTAAA	-17	NA	39380457	39397888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390920_39391768_39391837_39393165_39393281_39396865
WTC11_00059540	chr21	+	1472	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	-773	0	0	multi-exon	FALSE	canonical	2	8	junction_1	171.03855559493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39380230	False	NA	5	True	AGTAAA	-18	NA	39380457	39397889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
WTC11_00059546	chr21	+	2802	17	FSM	ENSG00000157601.15	ENST00000419044.6	3516	17	276	438	-3	0	multi-exon	FALSE	canonical	2	2	junction_1	4.91012983535059	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGCAGACACTGCT	41425851	True	NA	3	True	AATAAA	-3	NA	41426097	41459199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41426162_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
WTC11_00059554	chr21	+	1738	3	Fusion	ENSG00000228709.2_ENSG00000235890.2	novel	1856	2	NA	NA	95	-8090	multi-exon	FALSE	canonical	3	7	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTCTGTGTTTCATAA	44482935	False	NA	14	True	ATTAAA	-23	NA	44485580	44507533	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr21_+_44486231_44502594_44502796_44506646
WTC11_00059557	chr21	+	5534	2	Fusion	ENSG00000182912.6_ENSG00000235890.2	novel	2422	2	NA	NA	-2125	-1	intron_retention	FALSE	canonical	2	5	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACAGCTTCTTGTCTAA	NA	False	NA	3	True	CATAAA	-15	NA	44515090	44520829	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr21_+_44515854_44516058
WTC11_00059561	chr21	+	2079	15	NIC	ENSG00000183570.17	novel	2202	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_2	13.5573234972159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	45643284	True	NA	5	True	AATAAA	-19	NA	45643741	45942454	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_45643869_45735391_45735430_45849960_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
WTC11_00059565	chr21	+	435	2	FSM	ENSG00000142156.16	ENST00000492851.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCGACCCCGGCTTTGA	45987053	False	NA	NA	False	GGGGCT	-2	NA	45987108	45987633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45987520_45987609
WTC11_00059568	chr21	+	572	3	FSM	ENSG00000215424.10	ENST00000591223.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGGCCAAAATACAGGT	46228313	True	NA	NA	False	GGGGCT	-27	NA	46229224	46243750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46240833_46241020_46243406
WTC11_00059575	chr21	+	2198	12	NNC	ENSG00000160310.19	novel	2354	12	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	218.32589939608	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTATCCTGTTT	46627831	True	NA	19	True	AATAAA	-19	NA	46635649	46664946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46635764_46636443_46636548_46636895_46636991_46643531_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00059576	chr21	+	1041	7	NNC	ENSG00000160310.19	novel	2354	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_1	237.584897106978	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	46627867	True	NA	NA	False	NA	NA	NA	46635685	46649888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46635764_46636443_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
WTC11_00059577	chr21	+	2252	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	18	5019	11	675	5prime_fragment	FALSE	canonical	3	263	junction_1	184.183803493651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGGAATCTTTATTAAAA	46627873	True	NA	0	True	AATAAA	-11	NA	46635691	46660105	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
WTC11_00059578	chr21	+	1865	10	NIC	ENSG00000160310.19	novel	2131	11	NA	NA	19	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	239.472104615316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTATCCTGTTT	46627881	True	NA	19	True	AATAAA	-19	NA	46635699	46664946	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46660832_46660963_46661799_46661937_46663382_46663555_46664294
WTC11_00059585	chr21	-	6467	4	NNC	ENSG00000280145.3	novel	785	4	NA	NA	-9	8134	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.6495285928003	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTCATGCATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	6670704	6659169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_6665253_6666428_6666527_6668151_6668255_6670521
WTC11_00059587	chr21	-	778	4	NIC	ENSG00000280018.4	novel	710	5	NA	NA	0	204	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	33.5095342982992	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTGTTGCCTCATGC	NA	False	NA	NA	False	AATAAA	-14	NA	6997765	6986245	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_6986649_6993498_6993597_6995221_6995325_6997591
WTC11_00059596	chr21	-	1228	5	NIC	ENSG00000154642.11	novel	896	4	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	58.4695433537838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTTCTAGGGCTAATC	-17818925	False	NA	-20	True	AATAAA	-16	NA	17819019	17793249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17818857
WTC11_00059598	chr21	-	876	3	FSM	ENSG00000154723.13	ENST00000486002.1	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	5842	junction_2	449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCCCTCTTCTTAG	-25708768	True	NA	NA	False	NA	NA	NA	25734904	25724697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25725351_25729630_25729802_25734852
WTC11_00059600	chr21	-	492	2	FSM	ENSG00000156253.7	ENST00000466746.1	842	2	0	350	0	-162	multi-exon	FALSE	canonical	3	124	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCCAACTTTGGAGGT	-29018171	True	NA	NA	False	NA	NA	NA	29019306	29008225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29008622_29019210
WTC11_00059602	chr21	-	3924	19	ISM	ENSG00000156304.15	ENST00000286835.12	4269	20	44	12995	1	0	5prime_fragment	FALSE	canonical	3	215	junction_1	43.3912718082312	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATACTGTATTCTGCCC	-31723977	True	NA	-4	True	AATAAA	-20	NA	31732074	31683994	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
WTC11_00059612	chr21	-	1750	7	NIC	ENSG00000159147.18	novel	1820	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	127.455438836045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACATCTACTGAGCTA	-33584188	True	NA	-22	True	AATAAA	-4	NA	33588642	33577916	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33584589_33584769_33585977_33586182_33588320
WTC11_00059613	chr21	-	1858	8	NIC	ENSG00000159147.18	novel	1820	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	92.0634209085658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACATCTACTGAGCTA	-33584215	True	NA	-22	True	AATAAA	-4	NA	33588669	33577916	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33584589_33584769_33585977_33586182_33587521_33587603_33588320
WTC11_00059615	chr21	-	1606	14	NNC	ENSG00000205758.12	novel	1598	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.34024778398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTTCAACTATTC	-33638825	True	NA	0	True	NA	NA	NA	33641722	33589340	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_33589922_33591161_33591212_33595593_33595616_33595729_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059616	chr21	-	1528	12	FSM	ENSG00000205758.12	ENST00000290244.9	1685	12	157	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	125.005520539252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATTTTGAAGTCTTAA	-33638864	True	NA	-45	True	NA	NA	NA	33641761	33589385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059619	chr21	-	1407	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	0	-29	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	95.022833271668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAAAATAATAAAAAGTT	-33638825	True	NA	NA	False	NA	NA	NA	33641722	33595159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
WTC11_00059622	chr21	-	6250	3	NNC	ENSG00000185917.14	novel	3358	5	NA	NA	2192	0	intron_retention	FALSE	canonical	3	33	junction_2	89	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATTGTGCTTTCC	-36041166	False	NA	-15	True	ATTAAA	-16	NA	36041181	36034541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36036517
WTC11_00059625	chr21	-	6686	12	NIC	ENSG00000159267.17	novel	6466	12	NA	NA	67	136	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	21.0599302267843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAGTATTAAGAAGCC	-36980554	False	343	NA	False	AATAAA	-35	NA	36980897	36751055	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36947332_36948288_36962035_36962171_36980783
WTC11_00059626	chr21	-	5688	11	NIC	ENSG00000159267.17	novel	6010	12	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	11.3494493258484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGCTCCCTCTTATTT	NA	False	NA	-1	True	AATAAA	-18	NA	36990364	36751191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36990157
WTC11_00059628	chr21	-	688	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	61.8238424881534	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071468	True	NA	-4	True	AATAAA	-21	NA	37073149	37065373	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073096
WTC11_00059629	chr21	-	1120	6	NIC	ENSG00000185808.14	novel	972	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	69.5798821499433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071485	True	NA	-4	True	AATAAA	-21	NA	37073166	37065373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072847
WTC11_00059630	chr21	-	972	4	NNC	ENSG00000185808.14	novel	3437	4	NA	NA	0	-1735	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	54.942394074764	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACTGGCTGACTTCAC	-37071489	True	NA	NA	False	AATAAA	-22	NA	37073170	37071286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_37071818_37072144_37072311_37072433_37072538_37072999
WTC11_00059634	chr21	-	2471	6	NNC	ENSG00000185658.14	novel	2495	5	NA	NA	0	1262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.6395364227292	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACATACCTAACACTTT	-39305345	True	NA	NA	False	NA	NA	NA	39313590	39295174	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_39295203_39296436_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
WTC11_00059641	chr21	-	5547	16	ISM	ENSG00000141956.14	ENST00000398548.6	6525	24	42584	4	134	-4	3prime_fragment	FALSE	canonical	3	25	junction_13	4.89171635409177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGCTGGCCTTCTGCT	-41836685	True	NA	-9	True	AATAAA	-21	NA	41836760	41798228	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41835436_41835525_41836112_41836208_41836467
WTC11_00059650	chr21	-	1684	7	FSM	ENSG00000160201.12	ENST00000459639.5	1675	7	0	-9	0	9	multi-exon	FALSE	canonical	3	3780	junction_6	962.394698424485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTATTTCTTGTGGAAG	-43098928	False	NA	NA	False	AATAAA	-29	NA	43105252	43092946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314
WTC11_00059653	chr21	-	577	4	FSM	ENSG00000186866.17	ENST00000493811.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	75.5954143230042	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAAACACATCAGCCCG	-45286034	True	NA	NA	False	NA	NA	NA	45287891	45282368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45282399_45283382_45283528_45285677_45285929_45287740
WTC11_00059654	chr21	-	598	2	FSM	ENSG00000186866.17	ENST00000476653.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCCAAAATGTTTCTC	-45286035	True	NA	NA	False	NA	NA	NA	45287892	45285482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45285929_45287740
WTC11_00059658	chr21	-	5081	7	NNC	ENSG00000160298.18	novel	2941	9	NA	NA	0	40	intron_retention	FALSE	canonical	3	17	junction_6	20.637748585218	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGAGAGTGCTAATGC	-46321374	True	NA	33	True	AATAAA	-6	NA	46323869	46301089	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317349_46318011_46318221_46321145
WTC11_00059664	chr22	+	273	1	FSM	ENSG00000226160.1	ENST00000427602.1	88	1	0	-185	0	185	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTCAAAGGATTAATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	16405329	16405602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_16405300_16405600
WTC11_00059665	chr22	+	304	1	FSM	ENSG00000283633.1	ENST00000588548.1	2523	1	1936	283	1936	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACATTCCACCATTGT	16614505	False	NA	NA	False	AGTAAA	-13	NA	16614517	16614821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_16614500_16614800
WTC11_00059668	chr22	+	8566	13	FSM	ENSG00000177663.14	ENST00000319363.11	8566	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	16.337371949681	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGTTCTTCTTATTC	17083627	True	NA	4	True	AATAAA	-17	NA	17084999	17115693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17105852_17105955_17107726_17107769_17108306
WTC11_00059670	chr22	+	579	1	FSM	ENSG00000236325.1	ENST00000428401.1	373	1	-191	-15	-191	15	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTTTGTGTTTAAATAA	NA	False	NA	NA	False	AAGAAA	-21	NA	17192744	17193323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17192700_17193300
WTC11_00059671	chr22	+	1639	1	FSM	ENSG00000229492.1	ENST00000455617.1	1132	1	36	-543	36	543	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGAAAATGCCATATT	NA	False	NA	NA	False	NA	NA	NA	17418732	17420371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17418700_17420400
WTC11_00059672	chr22	+	12097	6	ISM	ENSG00000099954.19	ENST00000612582.1	9645	19	63332	-3901	-8574	3899	3prime_fragment	FALSE	canonical	2	5	junction_4	2.65329983228432	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAACAAGAAACATC	17540357	False	NA	NA	False	AATAAA	-21	NA	17540424	17562050	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_17540801_17541838_17541968_17542156_17543004_17548147_17549565_17552030_17552143_17552834
WTC11_00059673	chr22	+	4737	6	FSM	ENSG00000099968.18	ENST00000543133.5	4975	6	0	238	0	-5	multi-exon	FALSE	canonical	3	15	junction_3	95.4848679110989	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATTTTCCCTTTCTCTT	17638479	False	NA	2	True	AATAAA	-14	NA	17638583	17730617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17696140_17696211_17702242_17702387_17726676
WTC11_00059675	chr22	+	4981	7	FSM	ENSG00000099968.18	ENST00000317582.10	4959	7	-22	0	-6	0	multi-exon	FALSE	canonical	3	154	junction_6	44.6371170912977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17634834	True	NA	NA	False	NA	NA	NA	17638734	17730855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
WTC11_00059676	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	36.7532311504717	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	17634871	True	NA	-23	True	AATAAA	-24	NA	17638771	17703733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
WTC11_00059677	chr22	+	539	1	FSM	ENSG00000269220.1	ENST00000600723.1	2160	1	-72	1693	-72	-1693	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATCCCCTCTGGAAGG	17777235	False	NA	NA	False	NA	NA	NA	17777249	17777788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17777200_17777800
WTC11_00059678	chr22	+	4116	4	FSM	ENSG00000215193.14	ENST00000428061.2	815	4	-388	-2913	-1	2913	multi-exon	FALSE	canonical	2	5	junction_3	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGGAAAAGAAAGTTGTT	18073225	True	NA	31	True	ATTAAA	-34	NA	18077988	18091032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18078607_18079873_18080015_18083436_18083733_18087971
WTC11_00059679	chr22	+	1780	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	223	0	-211	multi-exon	FALSE	canonical	2	4	junction_1	1.6393596310755	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTGGGAAGATTCCGG	18110727	True	NA	NA	False	NA	NA	NA	18110808	18131509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
WTC11_00059680	chr22	+	2169	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	-311	0	-311	0	multi-exon	FALSE	canonical	2	21	junction_1	16.0872620417522	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18149245	True	NA	NA	False	AATAAA	-17	NA	18149858	18177397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
WTC11_00059681	chr22	+	463	5	FSM	ENSG00000278558.5	ENST00000620199.4	463	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	21.1364613878483	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCACCTGCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	18528946	18530222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18529094_18529440_18529498_18529605_18529725_18529935_18530009_18530155
WTC11_00059682	chr22	+	473	4	FSM	ENSG00000278558.5	ENST00000621725.4	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	23.1708629293104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGTGGGCGCGGCCGCGG	NA	False	NA	NA	False	NA	NA	NA	18529065	18530204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18529094_18529440_18529498_18529605_18529725_18529935
WTC11_00059683	chr22	+	788	4	FSM	ENSG00000278558.5	ENST00000618859.1	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	19.1369334592098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	18529408	18530573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18529498_18529605_18529725_18529935_18530197_18530254
WTC11_00059685	chr22	+	1220	1	NIC	ENSG00000161103.11	novel	5920	6	NA	NA	-589	-1427	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTACAAACAATGCCTGG	NA	False	NA	NA	False	NA	NA	NA	18852286	18853506	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_18852300_18853500
WTC11_00059686	chr22	+	3385	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	-47	-2221	-47	71	multi-exon	FALSE	canonical	3	85	junction_2	30.6675724503913	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCTCAGATACTGGGG	NA	False	NA	NA	False	ACTAAA	-40	NA	18906272	18914309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
WTC11_00059687	chr22	+	3250	5	FSM	ENSG00000183628.14	ENST00000483718.5	3245	5	-5	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.0913128487138	2685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTTTTCCTTTAAC	NA	False	NA	NA	False	ATTAAA	-18	NA	18906319	18914238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906468_18906564_18906726_18910171_18910273_18910887_18911029_18911539
WTC11_00059688	chr22	+	1199	6	FSM	ENSG00000183628.14	ENST00000427407.5	1199	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	59.5012604908501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	18905760	True	NA	NA	False	AATAAA	-16	NA	18906350	18912082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906485_18906564_18906726_18909979_18910099_18910171_18910273_18910887_18911029_18911539
WTC11_00059689	chr22	+	3525	2	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	-533	18	intron_retention	FALSE	canonical	3	29	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	18938900	False	NA	18	True	NA	NA	NA	18938912	18947759	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_18939750_18945071
WTC11_00059690	chr22	+	1406	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	62	18	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	3	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	18939495	False	NA	18	True	NA	NA	NA	18939507	18947759	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_18939750_18945105_18945301_18946790
WTC11_00059691	chr22	+	5492	5	FSM	ENSG00000273032.3	ENST00000438934.5	5492	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.35607132140714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGAGTCTGTGAAG	18970334	True	NA	12	True	ATTAAA	-16	NA	18970513	18994628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18970659_18987756_18987901_18988090_18988196_18989416_18989466_18989579
WTC11_00059692	chr22	+	3180	3	ISM	ENSG00000273032.3	ENST00000675978.1	3828	6	-1	25562	0	18	5prime_fragment	FALSE	canonical	3	11	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCCATAACAAATCCC	18970334	True	NA	30	True	ATTAAA	-34	NA	18970513	18994646	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_18970659_18990719_18990925_18991816
WTC11_00059693	chr22	+	1181	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	317	-53	317	53	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGGTGAAGAGGAGAC	19171273	True	NA	81	True	NA	NA	NA	19171711	19172892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19171700_19172900
WTC11_00059694	chr22	+	894	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	-215	65	-215	0	multi-exon	FALSE	canonical	3	344	junction_1	20.237478982214	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCAAGTCTGCTTT	19432307	False	NA	-34	True	NA	NA	NA	19432329	19436010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
WTC11_00059695	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	179.755389348971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	19429363	True	NA	23	True	AATAAA	-10	NA	19432578	19436067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
WTC11_00059696	chr22	+	554	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	0	1543	0	-1543	multi-exon	FALSE	canonical	2	7	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATTTTTTTTTTTTT	19447857	False	NA	NA	False	NA	NA	NA	19447892	19448562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19448326_19448441
WTC11_00059697	chr22	+	499	1	FSM	ENSG00000273212.1	ENST00000608816.1	460	1	-98	59	-98	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAAAGTCCACCTGTG	19456284	False	NA	NA	False	NA	NA	NA	19456404	19456903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19456400_19456900
WTC11_00059698	chr22	+	656	4	FSM	ENSG00000093009.11	ENST00000491520.5	723	4	67	0	-21	0	multi-exon	FALSE	canonical	3	198	junction_2	11.8133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACAAGATGATGACCT	NA	False	NA	NA	False	NA	NA	NA	19479804	19483873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480218_19480952_19481046_19482689_19482828_19483861
WTC11_00059699	chr22	+	1898	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	-19	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	18.4176512222164	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	19474866	True	NA	21	True	AATAAA	-22	NA	19479900	19520608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
WTC11_00059700	chr22	+	1715	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	-22	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	45.838893444859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	19474881	True	NA	-9	True	NA	NA	NA	19479915	19520578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
WTC11_00059701	chr22	+	1519	16	FSM	ENSG00000093009.11	ENST00000672837.1	1519	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	67.2177225307599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCATTGTGGCTCTGGT	19474881	True	NA	18	True	AATAAA	-19	NA	19479915	19520605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19516526_19516646_19516816_19516894_19518843_19518910_19520480
WTC11_00059702	chr22	+	1763	18	NIC	ENSG00000093009.11	novel	1879	19	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	50.8007846709418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAAATAAAATGCTTAT	19474884	True	NA	-12	True	NA	NA	NA	19479918	19520575	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19516526_19516646_19516816_19516894_19518843_19518910_19520480
WTC11_00059706	chr22	+	2359	12	FSM	ENSG00000184702.20	ENST00000455784.7	2031	12	-373	45	-373	0	multi-exon	TRUE	canonical	0	0	junction_1	42.4774125684745	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTCCTGTCCTGGTGA	19714114	False	NA	-34	True	NA	NA	NA	19714129	19723274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427
WTC11_00059707	chr22	+	3343	13	Fusion	ENSG00000184702.20_ENSG00000203618.6	novel	2031	12	NA	NA	-134	0	multi-exon	FALSE	canonical	0	0	junction_1	47.5034355482726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCTGCACGACTGACC	19714303	False	NA	3	True	AATAAA	-15	NA	19714368	19724771	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427_19723580_19723853
WTC11_00059708	chr22	+	1975	12	FSM	ENSG00000184702.20	ENST00000406395.5	1974	12	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.3997022107664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTCCTGTCCTGGTGA	19713981	True	NA	-34	True	NA	NA	NA	19714502	19723274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
WTC11_00059710	chr22	+	2241	11	FSM	ENSG00000184702.20	ENST00000438754.6	2241	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	42.0029760850347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	19718174	True	NA	11	True	NA	NA	NA	19718457	19723319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19718819_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
WTC11_00059714	chr22	+	2134	7	FSM	ENSG00000184058.15	ENST00000649276.2	2048	7	-86	0	-86	0	multi-exon	FALSE	canonical	3	44	junction_1	7.89514618821801	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTGCGTGTCCATTTA	19760679	False	NA	25	True	GATAAA	-21	NA	19760691	19767334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19761281_19763240_19763343_19764154_19764327_19764957_19765114_19765757_19765826_19765901_19766003_19766388
WTC11_00059715	chr22	+	546	2	FSM	ENSG00000184058.15	ENST00000475303.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGAGCTGGGCCGGA	19761176	False	NA	NA	False	NA	NA	NA	19761196	19763702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19761281_19763240
WTC11_00059716	chr22	+	905	1	FSM	ENSG00000235776.2	ENST00000424559.2	801	1	-5	-99	-5	99	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGTCTTGAGTGAG	NA	False	NA	NA	False	AATGAA	-27	NA	19792288	19793193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19792300_19793200
WTC11_00059717	chr22	+	3746	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	50	-2248	-11	1231	multi-exon	FALSE	canonical	3	10	junction_2	125.811605188075	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGTACCAGGCATGCAA	19940502	True	NA	NA	False	NA	NA	NA	19941822	19971206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
WTC11_00059718	chr22	+	1275	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	51	946	-11	0	multi-exon	FALSE	canonical	3	109	junction_1	97.3118697795906	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	19940502	True	NA	25	True	TATAAA	-34	NA	19941822	19969029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
WTC11_00059719	chr22	+	909	4	FSM	ENSG00000093010.15	ENST00000677675.1	909	4	-31	31	-31	0	multi-exon	FALSE	canonical	3	11	junction_1	144.907633415988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATTAAGAATCTAAATA	19960959	False	NA	-6	True	TATAAA	-3	NA	19963106	19968998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19963227_19963565_19963760_19964167_19964300_19968535
WTC11_00059723	chr22	+	2250	8	FSM	ENSG00000183597.16	ENST00000399807.7	2241	8	-9	0	8	0	multi-exon	FALSE	canonical	3	31	junction_4	21.3570234110372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	20020169	True	NA	-52	True	NA	NA	NA	20021079	20065862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
WTC11_00059725	chr22	+	2428	9	FSM	ENSG00000183597.16	ENST00000456048.5	2439	9	11	0	8	0	multi-exon	FALSE	canonical	3	34	junction_1	18.9917745353087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020169	True	NA	11	True	AATAAA	-23	NA	20021079	20065925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
WTC11_00059726	chr22	+	3530	9	FSM	ENSG00000183597.16	ENST00000327374.9	3509	9	-21	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.3116752039815	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGGGAGGCTGAG	20020178	True	NA	NA	False	AAAAAG	-43	NA	20021088	20067164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
WTC11_00059727	chr22	+	1983	7	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	22	junction_5	27.4934335594681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCATTTCGAGGCCTTTC	20020212	True	NA	6	True	AATAAA	-18	NA	20021122	20065920	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
WTC11_00059730	chr22	+	4514	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	-8	0	1	0	multi-exon	FALSE	canonical	3	72	junction_1	21.5150972176289	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	20077819	True	NA	11	True	CATAAA	-16	NA	20080232	20111872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
WTC11_00059731	chr22	+	4634	11	FSM	ENSG00000128191.16_ENSG00000284464.1	ENST00000498171.5	3661	11	-978	5	0	0	multi-exon	FALSE	canonical	3	79	junction_2	18.0136059688226	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	20086047	False	NA	11	True	CATAAA	-16	NA	20086057	20111872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20087322_20089668_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
WTC11_00059732	chr22	+	629	3	FSM	ENSG00000128191.16	ENST00000491892.1	630	3	1	0	1	0	multi-exon	FALSE	canonical	3	128	junction_1	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGAGTGGTAGTGTCCT	20094694	False	NA	NA	False	NA	NA	NA	20094712	20107036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20094796_20106176_20106278_20106591
WTC11_00059733	chr22	+	466	3	FSM	ENSG00000128191.16	ENST00000495351.1	508	3	0	42	0	-42	multi-exon	FALSE	canonical	3	130	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTGTGGGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	20106181	20107533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20106278_20106591_20106699_20107270
WTC11_00059734	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_1	2968.8534217775	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116091	False	NA	18	True	AATAAA	-21	NA	20116103	20127355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
WTC11_00059735	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_5	1771.17741629685	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116974	True	NA	18	True	AATAAA	-21	NA	20117423	20127355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
WTC11_00059736	chr22	+	699	3	FSM	ENSG00000099901.17	ENST00000488484.1	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	6911	junction_2	217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGACGAGGAGTGAGTG	20040252	True	NA	NA	False	NA	NA	NA	20117523	20122684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263
WTC11_00059737	chr22	+	861	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	-24	0	0	0	multi-exon	FALSE	canonical	3	3733	junction_5	1588.07727771667	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	20040252	True	NA	21	True	TATAAA	-12	NA	20117523	20127181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
WTC11_00059740	chr22	+	951	6	FSM	ENSG00000099901.17	ENST00000418705.2	932	6	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3051.39027985605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGAGAAGCAATAAATC	20117916	False	NA	-8	True	NA	NA	NA	20117933	20127035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20118314_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
WTC11_00059742	chr22	+	4950	11	FSM	ENSG00000099904.16	ENST00000334554.12	5049	11	0	99	0	-98	multi-exon	FALSE	canonical	3	83	junction_4	34.6502525243323	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCATTTGGGGACGAGAA	20129713	True	NA	NA	False	NA	NA	NA	20131803	20147908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20132052_20139193_20139316_20139477_20139636_20139719_20139893_20140114_20140218_20140616_20140709_20140870_20141013_20141216_20141338_20141420_20141531_20142755_20143757_20145228
WTC11_00059744	chr22	+	625	4	FSM	ENSG00000099904.16	ENST00000469212.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	40.2850951207626	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTGCTGGTGAGGTTG	20139900	False	NA	NA	False	NA	NA	NA	20139936	20141326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20140218_20140616_20140709_20140870_20141013_20141216
WTC11_00059746	chr22	+	3973	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	-73	0	-37	0	multi-exon	FALSE	canonical	3	127	junction_1	47.9374592568275	5307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20394065	False	NA	30	True	AATAAA	-41	NA	20394077	20408455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
WTC11_00059747	chr22	+	3887	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	-50	-1048	-37	0	multi-exon	FALSE	canonical	3	79	junction_1	73.1087470066947	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20394065	False	NA	30	True	AATAAA	-41	NA	20394077	20408455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
WTC11_00059748	chr22	+	4582	5	FSM	ENSG00000185252.19	ENST00000357502.5	2788	5	-46	-1748	0	968	multi-exon	FALSE	canonical	1	6	junction_1	93.1299495328973	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAGGCCAAGGCAAGA	20389594	True	NA	24	True	AATAAA	-41	NA	20394114	20409429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394335_20395332_20395419_20400631_20400759_20401276_20401373_20405376
WTC11_00059749	chr22	+	592	2	FSM	ENSG00000185252.19	ENST00000420626.1	591	2	-1	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTGCAGAGGAGTCAG	20389667	True	NA	NA	False	NA	NA	NA	20394187	20405493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394663_20405376
WTC11_00059750	chr22	+	3758	4	FSM	ENSG00000185252.19	ENST00000493734.5	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	38.262252939418	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTTCCAGTGAACATT	20389667	True	NA	18	True	AATAAA	-19	NA	20394187	20407680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20395419_20400631_20400759_20401276_20401373_20405376
WTC11_00059751	chr22	+	3879	2	FSM	ENSG00000185252.19	ENST00000476678.1	3879	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGCAAAAATTAGCC	20399498	False	NA	NA	False	NA	NA	NA	20399510	20407393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20401373_20405376
WTC11_00059752	chr22	+	365	3	FSM	ENSG00000099917.17	ENST00000486656.5	577	3	-5	217	-5	-217	multi-exon	FALSE	canonical	2	4	junction_2	175.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGCCCTGACGCTGCC	20500581	True	NA	NA	False	NA	NA	NA	20507576	20551531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537216_20551435
WTC11_00059753	chr22	+	722	7	FSM	ENSG00000099917.17	ENST00000414658.5	717	7	-5	0	-5	0	multi-exon	FALSE	canonical	1	9	junction_1	140.312448960644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAGCAGCAGCAGCAG	20500581	True	NA	NA	False	NA	NA	NA	20507576	20564500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20518877_20518996_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449
WTC11_00059754	chr22	+	615	6	FSM	ENSG00000099917.17	ENST00000432052.5	598	6	-17	0	-5	0	multi-exon	FALSE	canonical	1	9	junction_1	150.620582922786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGCAGCAGCAGCAGC	20500581	True	NA	NA	False	NA	NA	NA	20507576	20564606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20518877_20518996_20537116_20537205_20551435_20551488_20553144_20553175_20564449
WTC11_00059755	chr22	+	3392	18	FSM	ENSG00000099917.17	ENST00000263205.11	3351	18	-43	2	-15	0	multi-exon	FALSE	canonical	3	81	junction_9	74.4707740913953	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	20500571	True	NA	10	True	AATAAA	-16	NA	20507566	20587617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00059756	chr22	+	3285	17	FSM	ENSG00000099917.17	ENST00000433831.5	3267	17	-18	0	-15	0	multi-exon	FALSE	canonical	2	4	junction_2	76.4394163700901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	20500571	True	NA	12	True	AATAAA	-18	NA	20507566	20587619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537216_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00059758	chr22	+	3252	17	FSM	ENSG00000099917.17	ENST00000292733.11	3252	17	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	29.1780632496401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCCCCTTCTCCA	20500606	True	NA	25	True	AATAAA	-31	NA	20507601	20587632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00059762	chr22	+	3563	10	FSM	ENSG00000099917.17	ENST00000489651.5	3563	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	70.759547626076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	20573664	False	NA	10	True	AATAAA	-16	NA	20573677	20587617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00059764	chr22	+	4701	3	FSM	ENSG00000099917.17	ENST00000493216.1	4701	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	NA	False	NA	10	True	AATAAA	-16	NA	20582093	20587617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20583248_20583329_20585827_20586567
WTC11_00059768	chr22	+	867	8	NIC	ENSG00000226287.9	novel	926	7	NA	NA	61	-44	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	40.6252158549995	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGTGTAGACCAAGG	NA	False	NA	-41	True	NA	NA	NA	20702372	20704558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20702461_20702585_20702710_20703005_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
WTC11_00059769	chr22	+	811	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	63	junction_1	18.7552659272003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702542	True	NA	7	True	AATAAA	-17	NA	20702897	20704606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
WTC11_00059771	chr22	+	4282	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	209	junction_1	12.3768937944866	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	20855556	True	NA	8	True	AATAAA	-19	NA	20858983	20891214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
WTC11_00059772	chr22	+	932	2	FSM	ENSG00000099940.12	ENST00000490458.1	972	2	0	40	0	-40	multi-exon	FALSE	canonical	3	209	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTAGTCCCAGCTCCTC	20855653	True	NA	NA	False	NA	NA	NA	20859080	20871001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20859348_20870336
WTC11_00059773	chr22	+	5345	3	FSM	ENSG00000099942.13	ENST00000354336.8	5342	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	591	junction_1	16	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	20910379	True	NA	20	True	AATAAA	-27	NA	20917403	20953747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20918246_20933778_20934245_20949710
WTC11_00059774	chr22	+	2037	4	FSM	ENSG00000099942.13	ENST00000411769.1	2037	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	286.440608542543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	20910409	True	NA	20	True	AATAAA	-27	NA	20917433	20953747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20918246_20933778_20934245_20949710_20949928_20953205
WTC11_00059775	chr22	+	1529	3	FSM	ENSG00000099949.21	ENST00000493460.2	1660	3	0	131	0	-131	multi-exon	FALSE	canonical	3	103	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTATTGGTGATTT	20979076	True	NA	NA	False	NA	NA	NA	20982296	20987031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20982572_20983026_20983090_20985840
WTC11_00059776	chr22	+	4282	21	FSM	ENSG00000099949.21	ENST00000646124.2	4282	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	9.55654226171789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	20979076	True	NA	21	True	AATAAA	-34	NA	20982296	20999032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994270_20994557_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
WTC11_00059777	chr22	+	4058	16	FSM	ENSG00000099949.21	ENST00000646506.1	4058	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	8.59043395618379	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTAAAAAGCAAATTTT	20988016	False	NA	5	True	AATAAA	-18	NA	20988030	20999016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
WTC11_00059779	chr22	+	527	4	FSM	ENSG00000099949.21	ENST00000491432.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	49.0532590377257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGCAGGTGAACATCTC	20994462	False	NA	NA	False	NA	NA	NA	20994476	20995999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20994728_20994914_20995027_20995745_20995873_20995962
WTC11_00059780	chr22	+	3505	4	FSM	ENSG00000099949.21	ENST00000463909.1	3505	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	7.03957069398096	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	20995074	False	NA	21	True	AATAAA	-34	NA	20995088	20999032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20995873_20995962_20996802_20996885_20996967_20997231
WTC11_00059782	chr22	+	1261	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	8	0	3	multi-exon	FALSE	canonical	3	21	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAGAATTGCTTCTA	21001906	False	NA	18	True	ATTAAA	-31	NA	21001921	21003270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21002830_21002917
WTC11_00059784	chr22	+	909	1	FSM	ENSG00000226885.1	ENST00000441743.1	743	1	-123	-43	-123	43	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTTCCTGGAGAATTA	NA	False	NA	NA	False	NA	NA	NA	21268037	21268946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21268000_21268900
WTC11_00059785	chr22	+	6843	3	FSM	ENSG00000169635.10	ENST00000407464.7	6831	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	25	junction_2	12.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	21417324	False	NA	20	True	ATTAAA	-15	NA	21417358	21451463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21417561_21442758_21442858_21444921
WTC11_00059786	chr22	+	505	4	FSM	ENSG00000206140.12	ENST00000446867.5	496	4	-9	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	34.2571971351358	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTGGCTCTGGAGCCTC	21468566	False	NA	NA	False	GGGGCT	-42	NA	21468746	21469717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21468836_21468943_21469063_21469273_21469347_21469493
WTC11_00059787	chr22	+	2813	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	119	0	-48	0	multi-exon	FALSE	canonical	3	67	junction_1	1357	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556530	True	NA	16	True	AATAAA	-18	NA	21567665	21624034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21567772_21610856_21611044_21621514
WTC11_00059788	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2253	junction_1	216.378269601075	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556578	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
WTC11_00059789	chr22	+	3467	4	FSM	ENSG00000185651.15	ENST00000496722.1	3451	4	-16	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1237.07836812746	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556578	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21568378_21592860_21592957_21610856_21611044_21621514
WTC11_00059790	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	45	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	21631839	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21642524_21642861_21643059_21643893
WTC11_00059791	chr22	+	966	1	FSM	ENSG00000272954.1	ENST00000610143.1	430	1	-539	3	-539	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTGGAGGTTTTAGA	21661365	False	NA	1	True	AATAAA	-12	NA	21661394	21662360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21661400_21662400
WTC11_00059793	chr22	+	1852	14	FSM	ENSG00000100023.20	ENST00000496819.2	2411	14	-19	578	-10	-578	multi-exon	FALSE	canonical	3	174	junction_12	22.7814416321759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCAGCTGGGCTTGCT	21663923	True	NA	NA	False	NA	NA	NA	21665989	21688849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731
WTC11_00059794	chr22	+	1619	14	FSM	ENSG00000100023.20	ENST00000680426.1	3138	14	3	1516	3	-578	multi-exon	FALSE	canonical	3	174	junction_12	19.007939792306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCAGCTGGGCTTGCT	21663938	True	NA	NA	False	NA	NA	NA	21666004	21688849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731
WTC11_00059796	chr22	+	4137	21	FSM	ENSG00000100023.20	ENST00000681394.1	4115	21	-22	0	-10	0	multi-exon	FALSE	canonical	3	7	junction_11	64.5960331599395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATGAGGGCATCAGGT	21663923	True	NA	10	True	ATTAAA	-20	NA	21665989	21697865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
WTC11_00059798	chr22	+	3874	21	FSM	ENSG00000100023.20	ENST00000680962.1	3854	21	-20	0	3	0	multi-exon	FALSE	canonical	3	7	junction_11	72.9907357135137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAGGGCATCAGGTAAA	21663938	True	NA	13	True	ATTAAA	-23	NA	21666004	21697868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21695071_21695393_21695497_21695866
WTC11_00059800	chr22	+	2687	21	FSM	ENSG00000100023.20	ENST00000679827.1	2692	21	5	0	3	0	multi-exon	FALSE	canonical	3	7	junction_19	63.2048257651265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATCAGGTAAATTAAA	21663938	True	NA	-16	True	ATTAAA	-28	NA	21666004	21697873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21694967_21695393_21695497_21696746
WTC11_00059801	chr22	+	4178	20	FSM	ENSG00000100023.20	ENST00000681956.1	4168	20	-10	0	-10	0	multi-exon	FALSE	canonical	3	151	junction_16	27.0308124173987	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACATTCCTACAGCAAAT	21663923	True	NA	106	True	TATAAA	-29	NA	21665989	21697995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
WTC11_00059803	chr22	+	3015	21	FSM	ENSG00000100023.20	ENST00000679540.1	3005	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	18	junction_20	48.4240642656107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAAGTGATAAA	21663923	True	NA	NA	False	TTTAAA	-27	NA	21665989	21698220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696884
WTC11_00059805	chr22	+	4061	21	FSM	ENSG00000100023.20	ENST00000679795.1	4051	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	28	junction_20	46.6105138353998	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	21663923	True	NA	NA	False	GATAAA	-9	NA	21665989	21698248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21695866
WTC11_00059806	chr22	+	4948	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	-19	0	-10	0	multi-exon	FALSE	canonical	3	20	junction_20	48.0589221685214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	21663923	True	NA	NA	False	AATAAA	-20	NA	21665989	21700015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
WTC11_00059811	chr22	+	3840	17	FSM	ENSG00000100023.20	ENST00000680183.1	3840	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_16	50.078649080721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	21668658	False	NA	NA	False	GATAAA	-9	NA	21670724	21698248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
WTC11_00059817	chr22	+	5951	7	Fusion	ENSG00000211643.2_ENSG00000272779.1	novel	1121	8	NA	NA	-5110	2093	intron_retention	FALSE	canonical	3	57	junction_6	96.1083011792195	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTGTTTTTAATGTA	NA	False	NA	10	True	AATAAA	-21	NA	22298113	22321319	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105_22309884_22310225_22310402_22318898
WTC11_00059818	chr22	+	3370	3	FSM	ENSG00000128266.9	ENST00000615612.2	3170	3	-200	0	-200	0	multi-exon	FALSE	canonical	3	53	junction_1	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATTGTCCCAGTGT	23070045	True	NA	14	True	AATAAA	-15	NA	23070318	23125032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23070571_23095246_23096419_23123086
WTC11_00059819	chr22	+	6791	23	FSM	ENSG00000186716.21	ENST00000305877.13	6783	23	-11	3	-11	0	multi-exon	FALSE	canonical	3	300	junction_2	49.5456422014795	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTTGCGTGCATGTTGAC	23179180	True	NA	NA	False	ATTAAA	-14	NA	23180497	23318034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23182240_23253798_23253981_23260949_23261055_23261354_23261541_23268407_23268516_23271531_23271593_23273080_23273134_23273633_23273775_23283976_23284099_23285032_23285202_23287158_23287279_23288096_23288173_23289516_23289622_23290338_23290414_23292540_23292639_23295023_23295156_23309423_23309484_23310323_23310434_23311696_23311837_23312886_23313022_23313967_23314074_23314551_23314715_23315432
WTC11_00059820	chr22	+	2239	1	FSM	ENSG00000230701.2	ENST00000426721.2	2239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGACGTGACTTGGC	23262726	False	NA	NA	False	AATAAA	-35	NA	23262766	23265005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23262800_23265000
WTC11_00059821	chr22	+	753	2	FSM	ENSG00000186716.21	ENST00000458056.2	778	2	25	0	25	0	multi-exon	FALSE	canonical	2	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGGTCATGTCCCAGG	23312377	False	NA	NA	False	NA	NA	NA	23312412	23314695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23313022_23314551
WTC11_00059822	chr22	+	1776	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	-69	-630	-51	0	multi-exon	FALSE	canonical	2	5	junction_1	5.09901951359278	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTTCTTTATACT	23536061	True	NA	10	True	NA	NA	NA	23536829	23547797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
WTC11_00059823	chr22	+	1864	4	NNC	ENSG00000280623.1	novel	1077	4	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.16441400296898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTTCTTTATACT	23536061	True	NA	10	True	NA	NA	NA	23536829	23547797	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_23537137_23538672_23538839_23544227_23544307_23546485
WTC11_00059824	chr22	+	386	2	FSM	ENSG00000099953.10	ENST00000465730.1	644	2	-23	281	-23	-281	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGGCCTGGGAGCAGGA	23772805	False	NA	NA	False	NA	NA	NA	23772822	23779416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23772979_23779186
WTC11_00059825	chr22	+	2287	8	FSM	ENSG00000099953.10	ENST00000215743.8	2261	8	-26	0	-23	0	multi-exon	TRUE	canonical	3	44	junction_1	7.32900305050323	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	23772805	False	NA	7	True	ATTAAA	-16	NA	23772822	23784316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782225_23782484_23783410
WTC11_00059826	chr22	+	1665	4	FSM	ENSG00000099956.20	ENST00000491967.2	1642	4	-23	0	-6	0	multi-exon	FALSE	canonical	3	1872	junction_2	215.849227214018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGGGTCTCTAGCAG	NA	False	NA	NA	False	NA	NA	NA	23786956	23802060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943
WTC11_00059829	chr22	+	1716	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	14	0	14	0	multi-exon	FALSE	canonical	3	1683	junction_5	202.542433825606	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786944	23834540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
WTC11_00059830	chr22	+	5282	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	-23	-68	12	68	multi-exon	TRUE	canonical	3	295	junction_2	599.709395770151	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGTTTCTCCCGGCT	NA	False	NA	NA	False	NA	NA	NA	23786942	23838077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
WTC11_00059839	chr22	+	2966	12	FSM	ENSG00000133460.20	ENST00000345044.10	3219	12	253	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_5	14.1934684081991	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATTGTCTAAACATAT	23856812	True	NA	8	True	AATAAA	-23	NA	23856955	23886309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23856992_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758_23882870_23883771_23883874_23883948_23884025_23884301_23884430_23884648
WTC11_00059840	chr22	+	739	4	FSM	ENSG00000133460.20	ENST00000473740.5	887	4	148	0	148	0	multi-exon	FALSE	canonical	3	20	junction_1	6.84754619472471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGACTGCTCGTGGGA	23857004	False	NA	-96	True	NA	NA	NA	23857147	23875211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875116
WTC11_00059841	chr22	+	2787	2	FSM	ENSG00000133460.20	ENST00000473357.1	2787	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCC	NA	False	NA	NA	False	NA	NA	NA	23880408	23883307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23882647_23882758
WTC11_00059842	chr22	+	2358	2	FSM	ENSG00000133460.20	ENST00000486907.1	2358	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23882959	23885536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23884430_23884648
WTC11_00059843	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_2	2178	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	NA	False	NA	16	True	AATAAA	-15	NA	23894382	23895223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894583_23894771_23894945_23895039
WTC11_00059844	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885406	False	NA	20	True	AATAAA	-19	NA	23894697	23895227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894945_23895039
WTC11_00059845	chr22	+	210	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCATTCTTCTGGGATAC	23897208	False	NA	NA	False	NA	NA	NA	23897252	23897462	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_23897300_23897500
WTC11_00059846	chr22	+	2209	3	NNC	ENSG00000099974.8	novel	1582	3	NA	NA	0	-2673	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	431.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTCCCAGTGCTGTG	NA	False	NA	14	True	AATAAA	-28	NA	23966887	23969883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_23967023_23967385_23967562_23967985
WTC11_00059847	chr22	+	2085	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	-503	0	503	multi-exon	FALSE	canonical	3	10	junction_2	430.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTCCTCCTAGACATG	NA	False	NA	NA	False	NA	NA	NA	23966887	23973059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23967023_23967385_23967562_23971285
WTC11_00059849	chr22	+	1183	5	FSM	ENSG00000099984.11	ENST00000634759.1	1184	5	0	1	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_2	14.1509716980849	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGAGTTATTGGTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	23980057	23983914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23980310_23980947_23981036_23982627_23982779_23982870_23983045_23983396
WTC11_00059851	chr22	+	7224	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	9	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_1	9.33775523557488	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	24009868	True	NA	13	True	AATAAA	-13	NA	24011312	24178628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
WTC11_00059853	chr22	+	7525	37	FSM	ENSG00000099991.18	ENST00000398319.6	7480	37	-46	1	24	0	multi-exon	FALSE	canonical	3	21	junction_5	9.21636360093781	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGCCTCTTTGCTCA	24009927	False	NA	12	True	AATAAA	-12	NA	24011371	24178627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
WTC11_00059855	chr22	+	231	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAATGTGGTCATCC	24257538	False	NA	NA	False	NA	NA	NA	24257550	24257781	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_24257600_24257800
WTC11_00059856	chr22	+	6688	16	FSM	ENSG00000100014.20	ENST00000437398.5	6674	16	-14	0	-14	0	multi-exon	FALSE	canonical	3	163	junction_1	22.0468188685402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTTGTTGGTTTTT	24266021	True	NA	21	True	GATAAA	-16	NA	24270802	24417739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
WTC11_00059857	chr22	+	6781	17	FSM	ENSG00000100014.20	ENST00000314328.14	6763	17	-18	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_2	52.3772001327868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTTGTTGGTTTT	24266031	True	NA	20	True	GATAAA	-15	NA	24270812	24417738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
WTC11_00059860	chr22	+	2418	3	NIC	ENSG00000128271.22	novel	926	2	NA	NA	275	-14	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGTCCAAATGAGAATG	24423539	True	NA	9	True	AATAAA	-22	NA	24423905	24442342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24423958_24433130_24433737_24440582
WTC11_00059861	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2405	junction_1	51.0968579160098	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	24522077	True	NA	20	True	ATTAAA	-14	NA	24555998	24574971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
WTC11_00059866	chr22	+	2043	14	FSM	ENSG00000100031.19	ENST00000412658.5	2091	14	48	0	2	0	multi-exon	FALSE	canonical	3	57	junction_1	40.3073987070928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCGGATGGTGGTGGGA	24601502	True	NA	NA	False	NA	NA	NA	24603194	24628134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080
WTC11_00059867	chr22	+	2651	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	-21	0	-12	0	multi-exon	FALSE	canonical	3	30	junction_3	49.1648474239697	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	24601479	True	NA	25	True	AATAAA	-44	NA	24603171	24628996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
WTC11_00059873	chr22	+	399	3	NIC	ENSG00000167037.19	novel	344	4	NA	NA	35	72	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACAAAAC	24805665	True	NA	76	True	GATAAA	-3	NA	24806245	24814264	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24806345_24806440_24806485_24814008
WTC11_00059874	chr22	+	10732	13	FSM	ENSG00000197077.14	ENST00000358431.8	10732	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	8.88819441731559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	24950726	True	NA	20	True	AATAAA	-27	NA	24952715	25197448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24952773_25025632_25025785_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
WTC11_00059875	chr22	+	538	2	FSM	ENSG00000197077.14	ENST00000461374.1	673	2	0	135	0	-135	multi-exon	FALSE	canonical	3	33	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCTGGGGAAACCTT	25041292	False	NA	NA	False	NA	NA	NA	25041312	25049554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25041526_25049229
WTC11_00059877	chr22	+	1382	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	7	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	15.833114033569	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25445995	True	NA	32	True	AATAAA	-24	NA	25448086	25461678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
WTC11_00059878	chr22	+	1035	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	2	-448	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	40.1825832917696	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTCATTCATTCTT	25446003	True	NA	28	True	AATAAA	-39	NA	25448094	25461220	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
WTC11_00059881	chr22	+	3647	1	FSM	ENSG00000272977.1	ENST00000609475.1	3754	1	77	30	77	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTCATTAAAGATTTCA	NA	False	NA	6	True	AATAAA	-19	NA	25476294	25479941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25476300_25479900
WTC11_00059882	chr22	+	9302	21	FSM	ENSG00000100077.16	ENST00000324198.11	9277	21	-25	0	-25	0	multi-exon	FALSE	canonical	3	55	junction_2	8.13080561814141	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	25564138	True	NA	16	True	AATAAA	-18	NA	25564649	25729294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288
WTC11_00059883	chr22	+	3357	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	13	0	13	0	multi-exon	FALSE	canonical	3	63	junction_1	11.0855260988773	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	26428579	True	NA	12	True	AATAAA	-21	NA	26429272	26445015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
WTC11_00059884	chr22	+	4039	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	-19	0	-19	0	multi-exon	FALSE	canonical	3	191	junction_2	20.8299997332907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	26480145	True	NA	6	True	AATAAA	-17	NA	26483857	26494658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
WTC11_00059885	chr22	+	606	4	FSM	ENSG00000100104.13	ENST00000477945.1	607	4	1	0	1	0	multi-exon	FALSE	canonical	3	216	junction_3	12.657891697365	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTATCTGAATAAAGGG	26484270	False	NA	NA	False	NA	NA	NA	26487982	26491070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26488289_26488389_26488489_26490043_26490199_26491024
WTC11_00059886	chr22	+	2037	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	-8	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCGACTTTGCTACTT	26512106	True	NA	18	True	AGTAAA	-15	NA	26512528	26514565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26512500_26514600
WTC11_00059887	chr22	+	894	1	FSM	ENSG00000213707.2	ENST00000395823.2	563	1	-75	-256	-75	256	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGTATTTTCAATAGCC	NA	False	NA	NA	False	NA	NA	NA	26560450	26561344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26560400_26561300
WTC11_00059888	chr22	+	997	1	FSM	ENSG00000225783.9	ENST00000656640.1	944	1	-56	3	-28	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	26646340	False	NA	NA	False	NA	NA	NA	26646382	26647379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26646400_26647400
WTC11_00059889	chr22	+	528	3	FSM	ENSG00000225783.9	ENST00000425476.5	567	3	39	0	22	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTGGCGTTAGGGCT	26656837	False	NA	NA	False	NA	NA	NA	26657305	26665815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657355_26663315_26663510_26665530
WTC11_00059890	chr22	+	548	3	FSM	ENSG00000225783.9	ENST00000439738.5	628	3	80	0	22	0	multi-exon	FALSE	canonical	3	10	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTTAAATGACTTCAT	26656837	False	NA	NA	False	NA	NA	NA	26657305	26665872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657355_26663315_26663399_26665456
WTC11_00059891	chr22	+	1021	3	FSM	ENSG00000225783.9	ENST00000413665.6	1081	3	20	40	10	-40	multi-exon	FALSE	canonical	3	9	junction_2	26	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCAGTTGATGAAGAC	26657416	False	NA	NA	False	NA	NA	NA	26657477	26666180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663510_26665530
WTC11_00059892	chr22	+	9943	4	FSM	ENSG00000225783.9	ENST00000616213.4	9943	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	11.4309521329882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	26654910	True	NA	15	True	ATTAAA	-17	NA	26657519	26676475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26668157
WTC11_00059894	chr22	+	10144	5	FSM	ENSG00000225783.9	ENST00000613780.4	10143	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	11	junction_2	18.1710621593786	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	26654909	True	NA	15	True	ATTAAA	-17	NA	26657518	26676475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665456_26666938_26667184_26667311_26668157
WTC11_00059896	chr22	+	3035	2	FSM	ENSG00000235954.8	ENST00000662329.1	3057	2	22	0	6	0	multi-exon	FALSE	canonical	3	158	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTTCTTTAATAAATG	27917897	True	NA	-27	True	NA	NA	NA	27919409	27924916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017
WTC11_00059897	chr22	+	914	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	6	0	6	0	multi-exon	FALSE	canonical	3	126	junction_2	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	27917897	True	NA	20	True	AATAAA	-30	NA	27919409	27924963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017_27922179_27924346
WTC11_00059899	chr22	+	3707	4	FSM	ENSG00000235954.8	ENST00000417497.6	3733	4	26	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_3	9.7410927974683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATATGGTTTTTTTTTTT	27917901	True	NA	NA	False	NA	NA	NA	27919413	28002595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27999429
WTC11_00059900	chr22	+	4159	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	-13	0	6	0	multi-exon	FALSE	canonical	2	4	junction_4	7.52595508889071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCTAGCGAAAGCAGAAA	27917897	True	NA	NA	False	TTTAAA	-15	NA	27919409	28002641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
WTC11_00059901	chr22	+	931	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	171	-310	81	8	multi-exon	FALSE	canonical	3	48	junction_3	42.4575081699339	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGGCTTCTGGTAAT	28739766	False	NA	19	True	AATAAA	-30	NA	28742231	28757523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
WTC11_00059902	chr22	+	1106	6	FSM	ENSG00000100209.11	ENST00000216027.8	1106	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	25.2237982865388	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28739573	True	NA	6	True	AATAAA	-17	NA	28742038	28757510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863_28746009_28751240_28751289_28757077
WTC11_00059903	chr22	+	971	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	-16	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	58.031780086432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	28739573	True	NA	11	True	AATAAA	-22	NA	28742038	28757515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
WTC11_00059905	chr22	+	957	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	-100	-11	-78	6	multi-exon	FALSE	canonical	3	48	junction_3	50.9195443813081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTCTGGCTTCTGGTA	28740135	False	NA	17	True	AATAAA	-28	NA	28742600	28757521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
WTC11_00059906	chr22	+	763	2	ISM	ENSG00000100209.11	ENST00000495977.1	846	6	8264	-6	8264	1	3prime_fragment	FALSE	canonical	3	148	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTCTTTTCTGGCTTC	28750529	False	NA	12	True	AATAAA	-23	NA	28750964	28757516	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_28751289_28757077
WTC11_00059907	chr22	+	3779	4	FSM	ENSG00000159873.10	ENST00000421503.6	3766	4	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_2	248.541076417293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGTATTACTCCAC	28762260	True	NA	32	True	AATAAA	-26	NA	28772660	28789301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28773035_28773724_28773779_28783507_28783646_28786088
WTC11_00059908	chr22	+	4150	5	FSM	ENSG00000159873.10	ENST00000453543.5	1026	5	0	-3124	0	0	multi-exon	FALSE	canonical	3	14	junction_1	228.353344621882	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGTATTACTCCAC	28762303	True	NA	32	True	AATAAA	-26	NA	28772703	28789301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28773224_28773724_28773779_28780947_28781173_28783507_28783646_28786088
WTC11_00059909	chr22	+	3986	5	FSM	ENSG00000159873.10	ENST00000249064.9	3964	5	-22	0	-1	0	multi-exon	FALSE	canonical	3	474	junction_1	42.1337157155644	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGAGATATTTGTATTA	28762272	True	NA	26	True	AATAAA	-20	NA	28772672	28789295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28773035_28773724_28773779_28780947_28781173_28783507_28783646_28786088
WTC11_00059910	chr22	+	546	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	-25	-5	1	5	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCGTTCCATTTCTAA	28800383	True	NA	NA	False	NA	NA	NA	28800683	28801229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28800700_28801200
WTC11_00059911	chr22	+	304	1	FSM	ENSG00000272858.1	ENST00000607919.1	749	1	34	411	34	-411	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCATCTTAGCCTGAGCC	NA	False	NA	NA	False	AAAACA	-6	NA	28814947	28815251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28814900_28815300
WTC11_00059912	chr22	+	6872	9	FSM	ENSG00000183579.16	ENST00000544604.7	6872	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	14.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTCATTGGTCTGTT	28882440	True	NA	25	True	AATACA	-21	NA	28883571	29057488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28884067_28987075_28987202_29042494_29042570_29043298_29043431_29044779_29044891_29046715_29046884_29048388_29048492_29049196_29050949_29053578
WTC11_00059913	chr22	+	6186	9	FSM	ENSG00000183762.13	ENST00000400335.9	6181	9	-7	2	-7	-2	multi-exon	FALSE	canonical	2	6	junction_7	2.6809513236909	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATGGGCCCTATGCTG	29072722	True	NA	6	True	AATAAA	-21	NA	29073027	29146818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29073228_29094257_29094421_29098861_29098954_29121356_29121482_29125262_29125417_29137341_29137675_29138623_29138783_29140281_29140367_29141943
WTC11_00059914	chr22	+	516	4	FSM	ENSG00000183762.13	ENST00000453585.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.18993502999218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCCCAGGTAGCAATT	NA	False	NA	NA	False	NA	NA	NA	29121440	29138771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29121482_29125262_29125417_29137501_29137675_29138623
WTC11_00059915	chr22	+	808	4	NNC	ENSG00000186998.16	novel	641	6	NA	NA	-58	-15005	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	9.2736184954957	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCAGAAGCCACGGCT	29205827	False	NA	-6	True	NA	NA	NA	29205837	29216610	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_29206140_29214925_29215040_29215526_29215631_29216322
WTC11_00059916	chr22	+	641	6	FSM	ENSG00000186998.16	ENST00000430127.1	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	9.15204895091804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGCCCACCGGCCCCAA	29205527	True	NA	NA	False	GGGGCT	-2	NA	29205922	29231615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29226489_29226552_29231019_29231141_29231592
WTC11_00059917	chr22	+	381	6	FSM	ENSG00000186998.16	ENST00000487477.1	932	6	33	518	33	-518	multi-exon	FALSE	canonical	3	13	junction_5	5.13809303146605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTAGAGACAGACAGAC	NA	False	NA	NA	False	NA	NA	NA	29233378	29254287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202
WTC11_00059918	chr22	+	560	5	FSM	ENSG00000182944.18	ENST00000444626.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	1876.78987902216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCCCCCCAGGCATAC	29267989	False	NA	NA	False	NA	NA	NA	29268008	29278041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272385_29272432_29273740_29273865_29278029
WTC11_00059919	chr22	+	2576	17	FSM	ENSG00000182944.18	ENST00000332050.10	2552	17	-24	0	-24	0	multi-exon	FALSE	canonical	3	7	junction_7	1450.37083620018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTTCTCGGCCTCTGT	29267965	False	NA	52	True	AATAAA	-22	NA	29267984	29300522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288986_29289063_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059921	chr22	+	553	7	FSM	ENSG00000182944.18	ENST00000436425.5	553	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2113.48065338252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCAATCTAGCACAGGG	29216179	True	NA	NA	False	NA	NA	NA	29268252	29282424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29274264_29274283_29278029_29278217_29282389
WTC11_00059922	chr22	+	2234	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	-20	-7	0	0	multi-exon	FALSE	canonical	3	2001	junction_8	749.160277306365	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	29216179	True	NA	17	True	ATTAAA	-23	NA	29268252	29300343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059923	chr22	+	2415	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	-15	0	0	0	multi-exon	FALSE	canonical	3	1422	junction_8	853.642526178259	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216179	True	NA	51	True	AATAAA	-21	NA	29268252	29300521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059926	chr22	+	2306	16	NIC	ENSG00000182944.18	novel	2400	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	141	junction_8	1138.9562161129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216219	True	NA	51	True	AATAAA	-21	NA	29268292	29300521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288756_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059927	chr22	+	2414	17	NIC	ENSG00000182944.18	novel	2400	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	203	junction_14	1256.33264498052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216219	True	NA	51	True	AATAAA	-21	NA	29268292	29300521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299194_29299332_29299598_29299852_29300121
WTC11_00059929	chr22	+	3231	8	FSM	ENSG00000182944.18	ENST00000483415.5	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	3655	junction_7	516.047854132833	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGGCTTTATGCTG	29216239	True	NA	NA	False	NA	NA	NA	29268312	29291019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
WTC11_00059930	chr22	+	2009	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	-13	-7	0	0	multi-exon	FALSE	canonical	3	88	junction_5	1290.53755208182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	29216239	True	NA	17	True	ATTAAA	-23	NA	29268312	29300343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059932	chr22	+	7285	12	FSM	ENSG00000182944.18	ENST00000479135.5	7285	12	0	0	0	0	multi-exon	FALSE	canonical	3	3344	junction_4	457.519651386647	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29275433	False	NA	55	True	AATAAA	-25	NA	29275628	29300525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29278217_29282389_29282558_29286922_29287135_29288605_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059933	chr22	+	2630	8	FSM	ENSG00000182944.18	ENST00000469669.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	3423	junction_1	427.943063159251	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29290813	False	NA	55	True	AATAAA	-25	NA	29290829	29300525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00059935	chr22	+	1289	8	FSM	ENSG00000182944.18	ENST00000360091.3	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	1805.89411401123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29292136	True	NA	55	True	AATAAA	-25	NA	29292158	29300525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299194_29299281_29299598_29299852_29300121
WTC11_00059936	chr22	+	1594	4	FSM	ENSG00000182944.18	ENST00000610553.1	2300	4	713	-7	713	0	multi-exon	FALSE	canonical	3	3922	junction_1	371.541234439583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	29296174	False	NA	17	True	ATTAAA	-23	NA	29296238	29300343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29296369_29297826_29297950_29298732_29299852_29300121
WTC11_00059937	chr22	+	2905	6	FSM	ENSG00000185340.15	ENST00000616432.4	2925	6	20	0	-16	0	multi-exon	FALSE	canonical	3	85	junction_1	29.8167738026769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306578	False	NA	24	True	AGTAAA	-14	NA	29306601	29312785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
WTC11_00059939	chr22	+	1811	6	FSM	ENSG00000185340.15	ENST00000406549.7	1803	6	-8	0	-8	0	multi-exon	FALSE	canonical	1	2	junction_5	57.5930551368826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306041	True	NA	24	True	AGTAAA	-14	NA	29307014	29312785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29312142
WTC11_00059941	chr22	+	3399	5	FSM	ENSG00000185340.15	ENST00000618518.3	3382	5	-17	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	25.4103817366052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306067	True	NA	24	True	AGTAAA	-14	NA	29307040	29312785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
WTC11_00059942	chr22	+	2494	6	FSM	ENSG00000185340.15	ENST00000621062.4	2483	6	-11	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	52.4770425995978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306067	True	NA	24	True	AGTAAA	-14	NA	29307040	29312785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308058_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
WTC11_00059944	chr22	+	3683	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	12	100	12	-100	multi-exon	TRUE	canonical	3	29	junction_3	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCTGTTATTCTCT	29480147	False	NA	NA	False	AATAAA	-24	NA	29480229	29491290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
WTC11_00059945	chr22	+	6124	17	FSM	ENSG00000186575.19	ENST00000672896.1	5995	17	-133	4	-56	0	multi-exon	TRUE	canonical	3	106	junction_15	14.6200579256718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTGCCTTGGGCTT	29603484	False	NA	12	True	AATAAA	-14	NA	29603499	29698594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
WTC11_00059946	chr22	+	5966	16	FSM	ENSG00000186575.19	ENST00000338641.10	5950	16	-16	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	26.7179506865495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGCCTTGGGCTTCCTC	29598512	True	NA	16	True	AATAAA	-18	NA	29603616	29698598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29694751
WTC11_00059948	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	29712830	True	NA	100	True	NA	NA	NA	29767373	29770027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29767608_29769677
WTC11_00059949	chr22	+	938	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	10139	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	29712803	True	NA	3	True	AATAAA	-14	NA	29767346	29770413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29767549_29769677
WTC11_00059950	chr22	+	8917	20	FSM	ENSG00000100330.16	ENST00000333027.7	8906	20	-11	0	-11	0	multi-exon	FALSE	canonical	3	16	junction_17	17.8280491131266	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAATCTCCTCCTTTTT	29880762	True	NA	10	True	AATAAA	-17	NA	29883157	30030866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30023456_30023484_30025629
WTC11_00059951	chr22	+	9003	20	FSM	ENSG00000100330.16	ENST00000401950.7	8987	20	-16	0	-11	0	multi-exon	FALSE	canonical	3	42	junction_17	10.5310515662688	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTCCTCCTTTTTCA	29880762	True	NA	12	True	AATAAA	-19	NA	29883157	30030868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
WTC11_00059952	chr22	+	8874	19	FSM	ENSG00000100330.16	ENST00000351488.7	4464	19	-39	-4371	0	0	multi-exon	FALSE	canonical	3	16	junction_17	14.3015366523071	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAATCTCCTCCTTTTT	29880778	True	NA	10	True	AATAAA	-17	NA	29883173	30030866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30025629
WTC11_00059953	chr22	+	5890	19	FSM	ENSG00000100330.16	ENST00000323630.9	5866	19	-24	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	15.8989866902824	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTAACACTTCCT	29880778	True	NA	28	True	AATAAA	-29	NA	29883173	30027858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
WTC11_00059954	chr22	+	604	6	FSM	ENSG00000100330.16	ENST00000415511.1	604	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	29.8636903278881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGCCTTTCTGAAATGT	29883256	False	NA	NA	False	AAAAAG	-27	NA	29883268	29991669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29991503
WTC11_00059956	chr22	+	1722	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	36	1	36	-1	multi-exon	FALSE	canonical	3	39	junction_1	2.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTTGGCACGGTGGCT	30356364	True	NA	NA	False	AATAAA	-16	NA	30356670	30367095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30357133_30361960_30362115_30365989
WTC11_00059957	chr22	+	894	5	FSM	ENSG00000187860.11	ENST00000430839.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	16.1322658049017	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTCAAGAACACCAGGAG	30356768	True	NA	NA	False	NA	NA	NA	30357006	30370508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30357133_30361960_30362115_30365989_30366249_30369431_30369604_30370325
WTC11_00059958	chr22	+	884	3	FSM	ENSG00000187860.11	ENST00000482413.1	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCCTCACAGTATG	NA	False	NA	6	True	AATAAA	-23	NA	30373691	30376827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30374092_30376258_30376348_30376432
WTC11_00059959	chr22	+	1376	4	FSM	ENSG00000242114.6	ENST00000412752.5	759	4	-207	-410	-50	0	multi-exon	FALSE	canonical	3	34	junction_2	378.858226194913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	30425541	True	NA	32	True	AATAAA	-13	NA	30425572	30429053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30427121_30427404_30428461
WTC11_00059960	chr22	+	1094	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	-203	0	-50	0	multi-exon	FALSE	canonical	3	66	junction_2	408.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	30425541	True	NA	32	True	AATAAA	-13	NA	30425572	30429053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30428461
WTC11_00059961	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	84.9365776460426	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	30416561	True	NA	33	True	AATAAA	-14	NA	30425767	30429054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
WTC11_00059963	chr22	+	919	1	FSM	ENSG00000225774.2	ENST00000448467.1	1770	1	526	325	526	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGACATGGTGCACC	30543049	False	NA	NA	False	NA	NA	NA	30543061	30543980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30543100_30544000
WTC11_00059964	chr22	+	1943	9	FSM	ENSG00000185339.9	ENST00000405742.7	1936	9	-7	0	-7	0	multi-exon	FALSE	canonical	2	6	junction_2	103.318606141392	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCAGTGCCTGCCTCT	30604424	True	NA	-31	True	NA	NA	NA	30607144	30627005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30607396_30610870_30611064_30612884_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
WTC11_00059965	chr22	+	2214	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	-22	0	0	0	multi-exon	TRUE	canonical	3	298	junction_7	28.3989436423259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	30604431	True	NA	20	True	NA	NA	NA	30607151	30627271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
WTC11_00059967	chr22	+	2639	2	FSM	ENSG00000100036.13	ENST00000343605.5	2585	2	-54	0	-54	0	multi-exon	FALSE	canonical	3	29	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCATTTGTTGGT	30635091	True	NA	3	True	AATACA	-16	NA	30635726	30647893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30637070_30646597
WTC11_00059968	chr22	+	2001	4	ISM	ENSG00000184792.16	ENST00000452656.5	2763	10	-1303	17825	-1303	183	5prime_fragment	FALSE	canonical	2	11	junction_3	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGATCTTTGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	30886122	30889818	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_30887619_30888222_30888341_30889176_30889235_30889489
WTC11_00059969	chr22	+	468	2	FSM	ENSG00000184792.16	ENST00000433183.2	930	2	0	462	0	-260	multi-exon	FALSE	canonical	3	18	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGGCTGGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	30893462	30894001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30893567_30893637
WTC11_00059970	chr22	+	563	1	FSM	ENSG00000237977.1	ENST00000424380.1	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCGGTTGGGAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	30902218	30902781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30902200_30902800
WTC11_00059971	chr22	+	375	2	FSM	ENSG00000253352.10	ENST00000646021.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGCAATAGTTGGAGC	30965038	True	NA	117	True	AAAACA	-42	NA	30969244	30971483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969387_30971250
WTC11_00059972	chr22	+	4674	4	FSM	ENSG00000253352.10	ENST00000646496.1	4650	4	-24	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	75.6409647978895	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACTTTGAGTTGGGTT	30965038	True	NA	16	True	AATAAA	-16	NA	30969244	30978843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969387_30972047_30972173_30972854_30973588_30975169
WTC11_00059973	chr22	+	7906	3	FSM	ENSG00000253352.10	ENST00000563812.2	2787	3	-1819	-3300	0	19	multi-exon	FALSE	canonical	3	18	junction_1	76.5	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGCAAGTTATTCAACA	30965038	True	NA	NA	False	AATAAA	-37	NA	30969244	30979414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30972173_30972854_30973588_30975169
WTC11_00059974	chr22	+	4457	3	FSM	ENSG00000253352.10	ENST00000643920.1	4449	3	-8	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	45	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGCTTAAGTTACT	30965063	True	NA	4	True	AATAAA	-4	NA	30969269	30978831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969387_30972923_30973602_30975169
WTC11_00059975	chr22	+	7469	3	FSM	ENSG00000253352.10	ENST00000644773.2	7469	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	13	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCTTACTGTTTGAC	30965063	True	NA	NA	False	AATAAA	-18	NA	30969269	30979395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972854_30973588_30975169
WTC11_00059977	chr22	+	7008	3	FSM	ENSG00000253352.10	ENST00000647354.1	5875	3	-1133	0	-76	0	multi-exon	FALSE	canonical	3	100	junction_2	22.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATAAATACCCTTTTTT	30969084	False	NA	-8	True	NA	NA	NA	30969168	30978819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972854_30973602_30975169
WTC11_00059978	chr22	+	5017	4	FSM	ENSG00000253352.10	ENST00000519077.4	5017	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	58.8047617119566	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTGGGTTTCTGT	30969325	True	NA	21	True	AATAAA	-21	NA	30969471	30978848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969534_30971250_30971780_30972854_30973602_30975169
WTC11_00059981	chr22	+	6813	3	FSM	ENSG00000253352.10	ENST00000643071.1	6154	3	-664	5	0	0	multi-exon	FALSE	canonical	3	56	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATAAATACCCTTTTTT	30965088	True	NA	-8	True	NA	NA	NA	30969294	30978819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972923_30973602_30975169
WTC11_00059982	chr22	+	7084	2	FSM	ENSG00000253352.10	ENST00000644027.1	7084	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGAGTTGGGTTTCTG	30970167	False	NA	20	True	AATAAA	-20	NA	30970181	30978847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30973588_30975169
WTC11_00059987	chr22	+	3342	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	-47	1	-47	0	multi-exon	FALSE	canonical	3	42	junction_7	17.3637553541853	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	31080029	True	NA	20	True	GATAAA	-17	NA	31081270	31104623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
WTC11_00059988	chr22	+	3177	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	-48	1	-47	0	multi-exon	FALSE	canonical	3	36	junction_19	16.4503786718955	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	31080029	True	NA	20	True	GATAAA	-17	NA	31081270	31104623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
WTC11_00059989	chr22	+	3321	20	FSM	ENSG00000183963.19	ENST00000612341.4	3321	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	22.3449412371563	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	31084900	True	NA	20	True	GATAAA	-17	NA	31084995	31104623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31085292_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
WTC11_00059990	chr22	+	534	5	FSM	ENSG00000183963.19	ENST00000431481.1	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	11.0227038425243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGGTTTCAAAGCC	31087782	False	NA	NA	False	NA	NA	NA	31087877	31089725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698
WTC11_00059991	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_4	16.5653168464181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	31122453	True	NA	14	True	ATTAAA	-14	NA	31122965	31134697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
WTC11_00059992	chr22	+	2230	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	-15	0	4	0	multi-exon	FALSE	canonical	2	5	junction_2	17.9325510981815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	31122466	True	NA	13	True	ATTAAA	-13	NA	31122978	31134696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
WTC11_00059994	chr22	+	1764	6	FSM	ENSG00000185133.14	ENST00000401755.1	1751	6	-13	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3.54400902933387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127676	True	NA	-47	True	NA	NA	NA	31127788	31134636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
WTC11_00059995	chr22	+	1657	7	FSM	ENSG00000185133.14	ENST00000404453.5	1613	7	-44	0	-15	0	multi-exon	FALSE	canonical	3	45	junction_3	3.89087250997625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127626	False	NA	-47	True	NA	NA	NA	31127744	31134636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
WTC11_00059996	chr22	+	3179	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	3	0	3	multi-exon	FALSE	canonical	3	140	junction_3	7.83156008298049	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGGACTTCTTGTCT	31157784	True	NA	3	True	ATTAAA	-21	NA	31160181	31207016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
WTC11_00060000	chr22	+	1040	3	FSM	ENSG00000182541.18	ENST00000462625.1	1042	3	2	0	2	0	multi-exon	FALSE	canonical	3	160	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCACTCCAGCAACAG	31207646	True	NA	NA	False	NA	NA	NA	31212240	31259046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31212425_31225719_31225820_31258290
WTC11_00060001	chr22	+	3624	15	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	44.4063449226319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207646	True	NA	44	True	AATAAA	-25	NA	31212240	31280080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
WTC11_00060002	chr22	+	2681	15	FSM	ENSG00000182541.18	ENST00000406516.5	2657	15	-24	0	11	0	multi-exon	FALSE	canonical	3	29	junction_14	58.7700899215558	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207655	True	NA	NA	False	ATTAAA	-19	NA	31212249	31277638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
WTC11_00060003	chr22	+	3691	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	-24	0	0	0	multi-exon	FALSE	canonical	3	143	junction_15	25.2222124326951	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207679	True	NA	44	True	AATAAA	-25	NA	31212273	31280080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
WTC11_00060004	chr22	+	3198	12	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	80.1700671661281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207717	True	NA	44	True	AATAAA	-25	NA	31212311	31280080	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31212425_31258290_31258427_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31275150_31275309_31278296
WTC11_00060007	chr22	+	2789	15	FSM	ENSG00000182541.18	ENST00000340552.4	2789	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	65.2411539081376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31248442	False	NA	NA	False	ATTAAA	-19	NA	31248486	31277638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31248770_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
WTC11_00060008	chr22	+	951	5	FSM	ENSG00000182541.18	ENST00000465937.1	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	9.60468635614927	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCGCAGGCAACAATTG	31258938	False	NA	NA	False	NA	NA	NA	31258958	31266132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945
WTC11_00060011	chr22	+	2140	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	71	-268	-38	268	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGGATTCACCCGGTGAA	31346559	True	NA	NA	False	AAAACA	-24	NA	31346847	31348987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31346800_31349000
WTC11_00060012	chr22	+	1751	2	Genic_Genomic	ENSG00000213888.3	novel	1943	1	NA	NA	1157	2482	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCTTTAAAAAAAAAAAAAA	31347754	False	NA	64	True	NA	NA	NA	31348042	31351201	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_+_31348334_31349741
WTC11_00060013	chr22	+	1665	9	FSM	ENSG00000185721.13	ENST00000331457.9	1665	9	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_4	48.0414859782667	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTATTTTGGGAGAT	31386994	True	NA	NA	False	NA	NA	NA	31399603	31434452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31399726_31400619_31400744_31403028_31403205_31411011_31411082_31420255_31420426_31423279_31423411_31426614_31426783_31427059_31427183_31433871
WTC11_00060015	chr22	+	757	1	FSM	ENSG00000287817.1	ENST00000665497.1	873	1	45	71	45	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCTTGTGAATCTTGG	31490184	False	NA	-62	True	NA	NA	NA	31490194	31490951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31490200_31491000
WTC11_00060016	chr22	+	4162	32	FSM	ENSG00000198089.16	ENST00000432498.5	4162	32	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	31.9242730403862	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	31496262	True	NA	12	True	ATTAAA	-18	NA	31496274	31618551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00060017	chr22	+	4195	31	FSM	ENSG00000198089.16	ENST00000540643.5	4226	31	31	0	31	0	multi-exon	FALSE	canonical	3	39	junction_10	27.312370009861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	31496159	False	NA	12	True	ATTAAA	-18	NA	31496169	31618551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00060018	chr22	+	3741	31	FSM	ENSG00000198089.16	ENST00000400289.5	3739	31	-2	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.7192720947726	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	31495141	True	NA	9	True	ATTAAA	-15	NA	31496535	31618548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31496638_31508258_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00060019	chr22	+	4031	33	FSM	ENSG00000198089.16	ENST00000400288.7	4031	33	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	30.933838167127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGTTGAAAAAATTCAAT	31495141	True	NA	49	True	NA	NA	NA	31496535	31618588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00060023	chr22	+	1485	6	FSM	ENSG00000198089.16	ENST00000476577.5	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	11.5169440391104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	31614166	31618548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00060024	chr22	+	2415	24	FSM	ENSG00000100150.20	ENST00000645693.1	2403	24	-12	0	-12	0	multi-exon	FALSE	canonical	3	15	junction_22	51.9489352292766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGATTAGCATGGCCG	31753875	False	NA	NA	False	ATTAAA	-14	NA	31753885	31837279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971
WTC11_00060025	chr22	+	2689	26	FSM	ENSG00000100150.20	ENST00000642974.1	2682	26	-12	5	-12	-5	multi-exon	FALSE	canonical	3	21	junction_1	49.3785378479355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAATTGTATTTTA	31753875	False	NA	NA	False	AATAAA	-12	NA	31753885	31837319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971
WTC11_00060026	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.5389701121818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	31753933	False	NA	6	True	AATAAA	-20	NA	31753943	31784788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
WTC11_00060030	chr22	+	6374	43	FSM	ENSG00000100150.20	ENST00000651528.2	6554	43	-8	188	-3	-188	multi-exon	TRUE	canonical	3	35	junction_32	41.2914534375351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGTTGATTTGCCTC	31751415	True	NA	NA	False	NA	NA	NA	31754010	31907845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
WTC11_00060031	chr22	+	1579	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	-17	-284	-3	0	multi-exon	FALSE	canonical	3	124	junction_1	20.9250896055429	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	31751415	True	NA	6	True	AATAAA	-20	NA	31754010	31784788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
WTC11_00060036	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31921613	True	NA	38	True	AATAAA	-20	NA	31944534	31957603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31944821_31956138
WTC11_00060038	chr22	+	496	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	-26	-63	-26	63	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGGAAAGAAGAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	32039463	32039959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32039500_32040000
WTC11_00060039	chr22	+	6611	5	FSM	ENSG00000242082.2	ENST00000452181.2	6415	5	0	-196	0	196	multi-exon	FALSE	canonical	2	10	junction_4	4.86698058348295	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTGAAGTTTCTCT	32204447	True	NA	6	True	AATAAA	-23	NA	32205114	32278578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32205248_32207135_32207277_32268287_32268580_32269356_32273508_32276684
WTC11_00060040	chr22	+	1891	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	9	0	9	0	multi-exon	FALSE	canonical	3	46	junction_1	181.76728786769	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	NA	False	NA	57	True	ATTAAA	-16	NA	32474684	32498829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
WTC11_00060041	chr22	+	2073	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	-13	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	54.9357579359746	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469203	True	NA	57	True	ATTAAA	-16	NA	32474797	32498829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
WTC11_00060042	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.411699097901	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469203	True	NA	57	True	ATTAAA	-16	NA	32474797	32498829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
WTC11_00060043	chr22	+	1783	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	-27	-221	-27	0	multi-exon	FALSE	canonical	2	24	junction_1	181.946420684772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474740	False	NA	57	True	ATTAAA	-16	NA	32475209	32498829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
WTC11_00060044	chr22	+	1908	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	-20	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	172.636856942543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474767	False	NA	57	True	ATTAAA	-16	NA	32475236	32498829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
WTC11_00060045	chr22	+	4614	5	FSM	ENSG00000100234.12	ENST00000266085.7	4597	5	-20	3	-20	-3	multi-exon	TRUE	canonical	3	32	junction_3	8.07387763097757	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATCTGCTGTCTCTTGC	32801128	True	NA	18	True	AGTAAA	-18	NA	32801684	32863038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32802123_32849451_32849535_32857248_32857361_32858016_32858139_32859179
WTC11_00060046	chr22	+	4327	11	NIC	ENSG00000100281.14	novel	4216	12	NA	NA	-175	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	22.2910295859119	3474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	NA	False	NA	35	True	AATAAA	-45	NA	35257276	35295807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
WTC11_00060047	chr22	+	4426	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	-210	0	-175	0	multi-exon	FALSE	canonical	3	33	junction_1	27.9852381394014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	NA	False	NA	35	True	AATAAA	-45	NA	35257276	35295807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
WTC11_00060048	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	32.3831231765354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253665	True	NA	5	True	AAAAAG	-10	NA	35257451	35265570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
WTC11_00060049	chr22	+	1334	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	-9	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.7987958383026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	35253700	True	NA	2	True	AAAAAG	-7	NA	35257486	35265567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
WTC11_00060050	chr22	+	4101	11	FSM	ENSG00000100281.14	ENST00000216106.6	4095	11	-6	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	32.0856665818244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	35253700	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
WTC11_00060052	chr22	+	1120	10	FSM	ENSG00000100284.22	ENST00000456128.5	1133	10	13	0	9	0	multi-exon	TRUE	canonical	3	16	junction_3	66.0181419136316	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTAAGTGTGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	35299812	35333492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876_35317962_35321958_35322020_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403
WTC11_00060053	chr22	+	2375	15	FSM	ENSG00000100284.22	ENST00000411850.5	2390	15	9	6	9	3	multi-exon	FALSE	canonical	3	19	junction_14	52.8915428601062	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCAAGTCTCCTGGTCA	NA	False	NA	26	True	ATTAAA	-26	NA	35299812	35347986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346973_35347054
WTC11_00060054	chr22	+	318	2	FSM	ENSG00000100284.22	ENST00000465529.1	555	2	0	237	0	-237	multi-exon	FALSE	canonical	3	230	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCAACCCGCTTGGCTG	35295947	True	NA	NA	False	NA	NA	NA	35299865	35318079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876
WTC11_00060055	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_14	21.3724264472918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	35295975	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
WTC11_00060057	chr22	+	2568	3	FSM	ENSG00000100284.22	ENST00000492723.1	2568	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	27.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTCAAGTCTCCTGG	NA	False	NA	23	True	ATTAAA	-23	NA	35344185	35347983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35345785_35346929_35346970_35347054
WTC11_00060058	chr22	+	1920	5	FSM	ENSG00000100292.18	ENST00000481190.2	1697	5	-224	1	-224	1	multi-exon	FALSE	canonical	1	1	junction_1	32.3138902022025	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTTTTCATGGGCTTTG	NA	False	NA	24	True	AATAAA	-25	NA	35380868	35394213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35381330_35383105_35383227_35386684_35387177_35389863_35389964_35393467
WTC11_00060059	chr22	+	1557	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	-3	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	14.7139389695622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	35379945	True	NA	18	True	AATAAA	-19	NA	35381092	35394207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
WTC11_00060060	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_10	102.752737189819	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	35376293	True	NA	19	True	AATACA	-16	NA	35400139	35425431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
WTC11_00060061	chr22	+	4599	9	FSM	ENSG00000100297.16	ENST00000493076.5	4599	9	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_4	89.9527653827274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTTGTGCACTC	35410350	False	NA	25	True	AATAAA	-19	NA	35410408	35424501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317
WTC11_00060062	chr22	+	3779	3	FSM	ENSG00000100302.7	ENST00000216127.5	3447	3	-334	2	-334	-2	multi-exon	FALSE	canonical	3	16	junction_1	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGTGTCCTTGCCCATG	35540323	True	NA	8	True	AATAAA	-16	NA	35540496	35553997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35541501_35546800_35547081_35551502
WTC11_00060063	chr22	+	1345	3	FSM	ENSG00000128309.17	ENST00000401419.7	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	330.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTGCTAAATCTTGT	37019584	False	NA	16	True	AATAAA	-3	NA	37019634	37029801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019775_37024191_37024811_37029215
WTC11_00060064	chr22	+	1453	4	FSM	ENSG00000128309.17	ENST00000404802.7	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	355.876383032086	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAACCAAGTGCTAA	37008995	True	NA	9	True	NA	NA	NA	37019695	37029794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019775_37023751_37023928_37024191_37024811_37029215
WTC11_00060065	chr22	+	1354	3	FSM	ENSG00000128309.17	ENST00000429360.6	1350	3	0	-4	0	0	multi-exon	FALSE	canonical	3	549	junction_1	141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTCTGGGGCTGCCTCG	37009041	True	NA	34	True	AATAAA	-21	NA	37019741	37029819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37024191_37024811_37029215
WTC11_00060066	chr22	+	1333	4	FSM	ENSG00000128309.17	ENST00000404393.5	1329	4	-4	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	71.9830226897673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAGTGCTAAAT	37009067	True	NA	11	True	NA	NA	NA	37019767	37029796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019775_37024191_37024811_37025001_37025128_37029215
WTC11_00060067	chr22	+	1504	4	FSM	ENSG00000128309.17	ENST00000341116.7	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	332.782211063031	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTCTGGGGCTGCCTCG	37009067	True	NA	34	True	AATAAA	-21	NA	37019767	37029819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37023751_37023928_37024191_37024811_37029215
WTC11_00060068	chr22	+	5872	3	FSM	ENSG00000128309.17	ENST00000485587.1	5872	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	21	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTAGCTCTGGGGC	37009097	True	NA	27	True	AATAAA	-14	NA	37019797	37029812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37023751_37023928_37024191
WTC11_00060069	chr22	+	1709	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	57	junction_6	24.9440189551053	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	37049479	True	NA	28	True	AATAAA	-19	NA	37051720	37063390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
WTC11_00060070	chr22	+	3016	7	ISM	ENSG00000100379.18	ENST00000403888.8	1760	9	-14	16	-11	0	intron_retention	FALSE	canonical	3	14	junction_6	42.5558456619064	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	37049486	True	NA	12	True	AATAAA	-3	NA	37051727	37063374	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103
WTC11_00060071	chr22	+	1774	9	FSM	ENSG00000100379.18	ENST00000403888.8	1760	9	-14	0	-11	0	multi-exon	FALSE	canonical	2	9	junction_7	49.3298844515168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	37049486	True	NA	28	True	AATAAA	-19	NA	37051727	37063390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061176_37061538_37061630_37062524
WTC11_00060072	chr22	+	1438	7	FSM	ENSG00000100379.18	ENST00000456470.1	1438	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	43.545952739606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	37049634	False	NA	12	True	AATAAA	-3	NA	37051875	37063374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37061538_37061630_37062524
WTC11_00060074	chr22	+	2148	3	FSM	ENSG00000128283.7	ENST00000249014.5	2148	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	37559768	True	NA	17	True	ATTAAA	-20	NA	37560479	37569405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37560589_37566071_37566813_37568107
WTC11_00060075	chr22	+	2906	15	FSM	ENSG00000100083.19	ENST00000325180.12	2528	15	-378	0	-258	0	multi-exon	FALSE	canonical	3	25	junction_9	67.0382163320266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37608418	False	NA	17	True	AATAAA	-18	NA	37608466	37633564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
WTC11_00060077	chr22	+	3172	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	-372	0	-263	0	multi-exon	FALSE	canonical	3	224	junction_1	25.4545397473614	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37608413	False	NA	17	True	AATAAA	-18	NA	37608461	37633564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
WTC11_00060086	chr22	+	2536	17	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	16	junction_1	34.3519809290527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	37636455	True	NA	16	True	AATAAA	-16	NA	37639668	37656038	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37639847_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
WTC11_00060087	chr22	+	3204	18	FSM	ENSG00000100092.24	ENST00000649765.2	2658	18	-625	79	-625	0	multi-exon	FALSE	canonical	3	94	junction_17	17.6876004894012	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	37639029	False	NA	16	True	AATAAA	-16	NA	37639043	37656038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
WTC11_00060088	chr22	+	877	7	FSM	ENSG00000100092.24	ENST00000471650.5	900	7	23	0	23	0	multi-exon	FALSE	canonical	3	126	junction_3	13.6869767784319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCAACCTCAGGTGAG	37643467	False	NA	NA	False	NA	NA	NA	37643477	37647506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440
WTC11_00060090	chr22	+	2012	2	FSM	ENSG00000241360.2	ENST00000215904.7	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTGTTTGAGTCTATG	37656456	True	NA	18	True	AATAAA	-18	NA	37658722	37666932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37659357_37665554
WTC11_00060091	chr22	+	542	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	156	junction_2	12.684198393627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37673759	True	NA	13	True	AATAAA	-26	NA	37675621	37679802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
WTC11_00060092	chr22	+	710	5	NNC	ENSG00000100097.12	novel	331	5	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.6180552771765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGCCTCGTGTGTGTG	37673784	True	NA	10	True	AATAAA	-23	NA	37675646	37679799	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37675712_37676985_37677066_37677521_37677718_37678482_37678655_37679602
WTC11_00060093	chr22	+	689	5	FSM	ENSG00000273899.5	ENST00000468597.5	632	5	-21	-36	2	36	multi-exon	FALSE	canonical	3	286	junction_2	10.3198837202751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGTCCCACCCACCCC	37682779	True	NA	NA	False	NA	NA	NA	37686324	37690936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696
WTC11_00060094	chr22	+	2848	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	-18	0	2	0	multi-exon	FALSE	canonical	3	283	junction_5	11.0090871556183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	37682779	True	NA	23	True	ATTAAA	-17	NA	37686324	37693474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
WTC11_00060095	chr22	+	943	7	FSM	ENSG00000273899.5	ENST00000438329.5	945	7	2	0	2	0	multi-exon	FALSE	canonical	3	247	junction_6	20.5182845286832	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGCCTTCATTTCTT	37682779	True	NA	25	True	ATTAAA	-19	NA	37686324	37693476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
WTC11_00060096	chr22	+	3948	5	FSM	ENSG00000100106.22	ENST00000492485.5	3948	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7.44983221287567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGGTGCCAAAAGAAAGT	37697601	False	NA	NA	False	NA	NA	NA	37697620	37726570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37697697_37701305_37701480_37710426_37710567_37715762_37715935_37723184
WTC11_00060097	chr22	+	2137	8	FSM	ENSG00000100106.22	ENST00000407319.7	2115	8	-22	0	-17	0	multi-exon	FALSE	canonical	3	51	junction_7	119.657504433892	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAATTCTGCAGTGTAAA	37742663	True	NA	NA	False	AATAAA	-23	NA	37746215	37760346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37759416
WTC11_00060098	chr22	+	2078	8	NNC	ENSG00000100106.22	novel	2115	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_7	141.076184368299	1339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTGCAGTGTAAATA	37742685	True	NA	NA	False	AATAAA	-25	NA	37746237	37760348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37746421_37751771_37751829_37754915_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37759416
WTC11_00060099	chr22	+	2341	14	FSM	ENSG00000100106.22	ENST00000403663.6	2324	14	-17	0	-17	0	multi-exon	FALSE	canonical	3	321	junction_13	30.3995094946414	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTCCTGGTGGCTGTGT	37742663	True	NA	37	True	TTTAAA	-15	NA	37746215	37774140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
WTC11_00060101	chr22	+	2615	14	NNC	ENSG00000100106.22	novel	2324	14	NA	NA	2	369	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	73.5319437085824	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTCCTAGATGGCTG	37742719	True	NA	13	True	AATAAA	-14	NA	37746271	37774509	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37746421_37751771_37751829_37754915_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
WTC11_00060102	chr22	+	2220	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	-16	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	37770990	True	NA	17	True	AATAAA	-17	NA	37805212	37807432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37805200_37807400
WTC11_00060103	chr22	+	1535	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	-62	0	-33	0	multi-exon	TRUE	canonical	3	314	junction_2	18.9802528961023	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805083	True	NA	16	True	NA	NA	NA	37807871	37816897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
WTC11_00060106	chr22	+	1582	7	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	32	junction_1	117.350969318536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGGTCTGCTTTATT	37805149	True	NA	15	True	NA	NA	NA	37807937	37816896	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199
WTC11_00060108	chr22	+	3220	13	FSM	ENSG00000100129.18	ENST00000412331.6	3220	13	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_7	206.680291889564	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCACGTTCAGTATTT	NA	False	NA	22	True	CATAAA	-23	NA	37848867	37889407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
WTC11_00060113	chr22	+	4898	16	FSM	ENSG00000100139.14	ENST00000215957.10	4710	16	-299	111	-299	-111	multi-exon	TRUE	canonical	3	84	junction_5	8.75747299929228	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTCTCGATCTCCTG	37905906	False	NA	NA	False	NA	NA	NA	37905997	37942711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
WTC11_00060121	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	826.828881933862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	37927339	True	NA	13	True	AATAAA	-14	NA	37953698	37967798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
WTC11_00060122	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1805	junction_4	112.226333808068	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	37927339	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
WTC11_00060123	chr22	+	2065	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	-1481	0	-30	multi-exon	FALSE	canonical	0	0	junction_1	849.756251815778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTCTTGAATAAAATGTC	37927367	True	NA	-15	True	NA	NA	NA	37953726	37969282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
WTC11_00060124	chr22	+	2110	13	FSM	ENSG00000100151.16	ENST00000404072.7	2164	13	46	8	-9	0	multi-exon	FALSE	canonical	3	21	junction_1	41.5293570862829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCAGTGGTCGCAGTG	NA	False	NA	5	True	AATAAA	-12	NA	38057245	38075693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38057490_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
WTC11_00060125	chr22	+	2540	12	FSM	ENSG00000100151.16	ENST00000484021.5	2531	12	-9	0	-9	0	multi-exon	FALSE	canonical	1	2	junction_1	48.2433569271802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCAGTGGTCGCAGTG	NA	False	NA	5	True	AATAAA	-12	NA	38057245	38075693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38057437_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38074452_38074863
WTC11_00060129	chr22	+	2067	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	-9	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	14.4702760474322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054657	True	NA	13	True	AATAAA	-20	NA	38057394	38075701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
WTC11_00060135	chr22	+	2391	3	FSM	ENSG00000185022.12	ENST00000338483.7	2374	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	20	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTATCCTGGACTA	38201566	True	NA	NA	False	AATAAA	-29	NA	38201976	38216507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38202213_38213822_38213890_38214419
WTC11_00060136	chr22	+	239	1	FSM	ENSG00000241693.2	ENST00000478699.2	274	1	74	-39	74	39	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTGTTACAGGTCAC	NA	False	NA	NA	False	AATAAA	-15	NA	38231793	38232032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38231800_38232000
WTC11_00060137	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	3.39934634239519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	38467171	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
WTC11_00060138	chr22	+	1788	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	-94	0	-76	0	multi-exon	FALSE	canonical	3	68	junction_3	2.95803989154981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	38467095	True	NA	18	True	AATAAA	-21	NA	38468001	38483447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
WTC11_00060139	chr22	+	441	2	FSM	ENSG00000100211.11	ENST00000475924.5	566	2	-9	134	-9	-134	multi-exon	FALSE	canonical	3	310	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCTCATTATGATATTT	38652987	True	NA	NA	False	NA	NA	NA	38656626	38668333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38656751_38668016
WTC11_00060140	chr22	+	1293	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	-24	0	-9	0	multi-exon	FALSE	canonical	3	51	junction_1	125.789665712252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38652987	True	NA	10	True	ATTAAA	-10	NA	38656626	38673846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
WTC11_00060141	chr22	+	1150	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	0	-4	0	4	multi-exon	FALSE	canonical	3	305	junction_2	5.2618912949623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	38652998	True	NA	18	True	ATTAAA	-18	NA	38656637	38673854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
WTC11_00060145	chr22	+	2161	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	-9	-121	-9	121	multi-exon	FALSE	canonical	3	1368	junction_2	66.6399946645323	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAACAGCGTCAT	38656569	True	NA	129	True	AATGAA	-2	NA	38681947	38685542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
WTC11_00060147	chr22	+	815	4	FSM	ENSG00000100226.16	ENST00000418601.1	810	4	-5	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	120.028700271597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCACCAAGATTGACAT	38701608	True	NA	NA	False	NA	NA	NA	38705943	38721822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38706148_38715906_38716088_38716651_38717001_38721741
WTC11_00060148	chr22	+	4905	12	FSM	ENSG00000100226.16	ENST00000216044.10	4905	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	17.5074954432156	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGGCCTGACCCTTCT	38701608	True	NA	23	True	AATAAA	-24	NA	38705943	38733587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38706148_38708844_38708957_38715906_38716088_38716651_38717001_38721741_38721866_38724296_38724412_38726005_38726151_38726257_38726441_38727212_38727349_38727982_38728162_38729461_38729663_38730611
WTC11_00060150	chr22	+	491	1	FSM	ENSG00000272669.1	ENST00000609212.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCATTTGATAGTGTGT	38742610	False	NA	7	True	AATAAA	-17	NA	38742624	38743115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38742600_38743100
WTC11_00060151	chr22	+	345	1	FSM	ENSG00000273076.1	ENST00000607991.1	416	1	-34	105	-34	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAGGAAAAGTCATA	NA	False	NA	NA	False	AAAAAG	-40	NA	38743460	38743805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38743500_38743800
WTC11_00060152	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	7.77751862218069	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	38981923	True	NA	26	True	AATAAA	-39	NA	38982346	38992779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
WTC11_00060153	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	49.2702299117383	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	39011829	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
WTC11_00060154	chr22	+	4851	7	FSM	ENSG00000128394.17	ENST00000308521.10	4496	7	-355	0	-95	0	multi-exon	FALSE	canonical	3	21	junction_6	13.5820551545862	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTCTGAGAGGTTTTG	39040494	False	NA	10	True	ATTAAA	-19	NA	39040508	39055972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39040978_39042936_39043091_39044940_39045221_39045427_39045543_39049424_39049582_39052073_39052354_39052576
WTC11_00060155	chr22	+	626	2	FSM	ENSG00000239713.9	ENST00000481958.1	2337	2	9	1702	9	-175	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTTGAGCCTTGGAAT	39080599	False	NA	NA	False	NA	NA	NA	39080643	39081512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39081228_39081470
WTC11_00060156	chr22	+	954	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	-100	507	-100	-29	multi-exon	TRUE	canonical	3	444	junction_3	32.8667342798493	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCATTCAGTAAACATT	NA	False	NA	-23	True	NA	NA	NA	39349824	39377882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
WTC11_00060157	chr22	+	4276	2	FSM	ENSG00000100321.15	ENST00000489206.1	1999	2	-52	-2225	5	46	multi-exon	FALSE	canonical	3	520	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTTAAGAGTAATTCTC	39345039	True	NA	63	True	NA	NA	NA	39349953	39378435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315
WTC11_00060158	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	228.391476782008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	39345072	True	NA	6	True	AGTAAA	-14	NA	39349986	39377911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
WTC11_00060159	chr22	+	4549	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	-166	0	-100	0	multi-exon	FALSE	canonical	3	43	junction_3	211.950203795346	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	NA	False	NA	16	True	AATAAA	-19	NA	39349824	39385575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
WTC11_00060160	chr22	+	474	1	FSM	ENSG00000280216.1	ENST00000623458.1	406	1	-79	11	-79	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTCTAATGACAAGTT	39379519	False	NA	-5	True	AATAAA	-10	NA	39379530	39380004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39379500_39380000
WTC11_00060161	chr22	+	3217	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	-19	0	-17	0	multi-exon	FALSE	canonical	3	69	junction_6	13.499629624549	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	39395760	True	NA	15	True	AATAAA	-28	NA	39399760	39431882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
WTC11_00060162	chr22	+	1739	2	NNC	ENSG00000100324.14	novel	804	2	NA	NA	-327	-1526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGTCAATCCTGTAG	39432084	False	NA	6	True	AATAAA	-16	NA	39432103	39435297	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_39432664_39434118
WTC11_00060163	chr22	+	5224	2	FSM	ENSG00000128268.12	ENST00000341184.7	5394	2	170	0	170	0	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGCATGTGTGGCCGG	39456812	True	NA	19	True	AATAAA	-20	NA	39457181	39492194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39457558_39487346
WTC11_00060164	chr22	+	5710	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	-22	0	12	0	multi-exon	FALSE	canonical	3	102	junction_4	31.6328942716281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	39498153	True	NA	6	True	AATAAA	-17	NA	39502267	39518132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
WTC11_00060165	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	43.1295722213889	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	39498187	True	NA	8	True	ATTAAA	-20	NA	39502301	39516380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
WTC11_00060166	chr22	+	3819	7	FSM	ENSG00000100335.15	ENST00000404569.5	3797	7	-22	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	62.9091055059246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGCCTGAGTACCAT	39498240	True	NA	NA	False	NA	NA	NA	39502354	39516178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512231_39512495_39513516
WTC11_00060167	chr22	+	5687	7	FSM	ENSG00000100335.15	ENST00000428069.1	1379	7	-42	-4266	0	0	multi-exon	FALSE	canonical	2	5	junction_2	63.6701569723908	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	39498240	True	NA	6	True	AATAAA	-17	NA	39502354	39518132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512317_39512495_39513516
WTC11_00060168	chr22	+	1900	4	FSM	ENSG00000128272.18	ENST00000404241.6	1910	4	9	1	9	-1	multi-exon	FALSE	canonical	2	3	junction_1	202.129221594064	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGTGCGTTTGAATT	39519693	False	NA	28	True	AATAAA	-16	NA	39519703	39522682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39519802_39520177_39520752_39521353_39521672_39521772
WTC11_00060171	chr22	+	2021	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	-2	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39497469	True	NA	29	True	AATAAA	-17	NA	39520561	39522683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39521672_39521772
WTC11_00060173	chr22	+	854	1	FSM	ENSG00000226085.3	ENST00000435169.1	820	1	5	-39	5	39	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATGTCACCTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	39875293	39876147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39875300_39876100
WTC11_00060174	chr22	+	15561	5	FSM	ENSG00000133477.17	ENST00000333407.11	15561	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	4.86698058348295	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTCTCTCTCTTT	39993254	True	NA	10	True	AATAAA	-20	NA	39994953	40043534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39995532_40019167_40019336_40019886_40020009_40021289_40021964_40029515
WTC11_00060175	chr22	+	434	4	FSM	ENSG00000100354.21	ENST00000441751.5	415	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	10	junction_1	1.63299316185545	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCACAGTTTATTTAA	40043629	True	NA	NA	False	AAGAAA	-8	NA	40044797	40156182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114
WTC11_00060176	chr22	+	17950	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	-17	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	13.8470213403461	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	40170630	True	NA	6	True	AATAAA	-20	NA	40177924	40335808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
WTC11_00060177	chr22	+	6168	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	0	507	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	14.1970262926979	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCGTTCTGGTGTGTGTG	40170630	True	NA	NA	False	GATAAA	-37	NA	40177924	40323867	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
WTC11_00060179	chr22	+	4323	1	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	286667	1	30628	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTATTGTGGTTTCC	40331460	False	NA	4	True	AATAAA	-18	NA	40331483	40335806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_40331500_40335800
WTC11_00060180	chr22	+	1811	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	-3	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	315.301718285389	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	40335240	True	NA	NA	False	AGTAAA	-23	NA	40346499	40366996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
WTC11_00060181	chr22	+	1350	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	-14	0	-14	0	multi-exon	FALSE	canonical	3	22	junction_7	390.808784666926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	74	True	NA	NA	NA	40346446	40366614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
WTC11_00060182	chr22	+	3285	12	FSM	ENSG00000239900.14	ENST00000681159.1	3278	12	-7	0	-7	0	multi-exon	FALSE	canonical	3	1098	junction_10	93.281410193046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAAGTGATGAAGTTTG	40335233	True	NA	NA	False	NA	NA	NA	40346492	40366941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40363072_40364275_40364366_40364879_40365057_40366435
WTC11_00060184	chr22	+	1866	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_13	332.748567942006	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335233	True	NA	-41	True	NA	NA	NA	40346492	40367837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
WTC11_00060185	chr22	+	4366	13	FSM	ENSG00000239900.14	ENST00000623063.3	4359	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	1098	junction_11	89.9979938048004	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTCTGCGTGTTCAC	40335233	True	NA	10	True	NA	NA	NA	40346492	40369367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
WTC11_00060186	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	358.500273753022	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	40335240	True	NA	68	True	ATTAAA	-17	NA	40346499	40369425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
WTC11_00060189	chr22	+	4574	31	FSM	ENSG00000284431.1	ENST00000639722.1	4563	31	-11	0	-11	0	multi-exon	TRUE	canonical	1	3	junction_1	425.981637580255	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGGCTCCTGGCCTCTTT	40335258	True	NA	-33	True	NA	NA	NA	40346517	40410054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40348396_40348647_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40409373_40409464_40409526_40409681
WTC11_00060195	chr22	+	3009	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	-23	0	-20	0	multi-exon	FALSE	canonical	3	291	junction_19	44.7005658752678	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	40364513	True	NA	9	True	NA	NA	NA	40370570	40410289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
WTC11_00060196	chr22	+	2973	20	FSM	ENSG00000100359.21	ENST00000485962.5	2973	20	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_17	45.5976016281364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	40364581	True	NA	21	True	AATAAA	-21	NA	40370638	40410108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
WTC11_00060197	chr22	+	4218	9	FSM	ENSG00000100359.21	ENST00000478085.5	4218	9	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	36.8576230242809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACCTACCTGTCTT	NA	False	NA	16	True	AATAAA	-16	NA	40404112	40410103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40408430_40408626_40408698_40408793_40409373_40409464
WTC11_00060202	chr22	+	1029	6	FSM	ENSG00000100359.21	ENST00000469719.5	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_5	24.9286983214126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCTAGTAGGCTCCTGG	40408375	False	NA	-40	True	NA	NA	NA	40408387	40410047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40408430_40408626_40408698_40408793_40408843_40408932_40409373_40409464_40409526_40409681
WTC11_00060204	chr22	+	666	5	FSM	ENSG00000100359.21	ENST00000417424.1	666	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	172.754884156715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTGCAGCTAGGGC	40408781	False	NA	31	True	AATAAA	-31	NA	40408793	40410118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40408843_40408932_40409019_40409339_40409373_40409464_40409526_40409681
WTC11_00060205	chr22	+	1438	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	-20	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	40853216	True	NA	28	True	ATTAAA	-25	NA	40857076	40862770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40857246_40860677_40860794_40861617
WTC11_00060206	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.4774890970011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	40853287	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
WTC11_00060207	chr22	+	397	3	FSM	ENSG00000100387.9	ENST00000476110.1	574	3	0	177	0	-177	multi-exon	FALSE	canonical	3	3506	junction_1	102.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTATACAAATAGTAAAAAAG	40921371	True	NA	NA	False	NA	NA	NA	40951346	40964234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40951477_40953554_40953634_40964046
WTC11_00060208	chr22	+	1169	5	FSM	ENSG00000100387.9	ENST00000216225.9	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3506	junction_1	109.581875782449	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTATGAGAATCTAACG	40921402	True	NA	NA	False	NA	NA	NA	40951377	40973309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40951477_40953554_40953634_40964046_40964118_40967798_40967885_40972475
WTC11_00060209	chr22	+	590	1	FSM	ENSG00000237214.3	ENST00000418783.1	582	1	-8	0	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCACCTGTCCCTCCT	41064011	False	NA	-78	True	GGGGCT	-28	NA	41064043	41064633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41064000_41064600
WTC11_00060210	chr22	+	9633	31	FSM	ENSG00000284015.1_ENSG00000100393.14	ENST00000263253.9	8779	31	-854	0	-775	0	multi-exon	FALSE	canonical	3	93	junction_1	39.1882068428189	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTTTGTTTCACTTG	41083433	True	NA	22	True	AATAAA	-17	NA	41091737	41180077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41093099_41117186_41117822_41125863_41126041_41127486_41127749_41129889_41130004_41131387_41131634_41135812_41135907_41137652_41137791_41140139_41140258_41141047_41141223_41146738_41146817_41147836_41147947_41149037_41149176_41149760_41150199_41151832_41152013_41152205_41152351_41154994_41155114_41157168_41157409_41158411_41158501_41160641_41160723_41162722_41162780_41164052_41164131_41166598_41166667_41168448_41168600_41168720_41168868_41169502_41169617_41170405_41170572_41172498_41172664_41173622_41173785_41176246_41176529_41176772
WTC11_00060211	chr22	+	8288	30	FSM	ENSG00000100393.14	ENST00000674155.1	8288	30	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	46.4099245198243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTTTGTTTCACTTG	41092382	False	NA	22	True	AATAAA	-17	NA	41093004	41180077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41093099_41117186_41117822_41125863_41126041_41127486_41127749_41129889_41130004_41131387_41131634_41135812_41135907_41137652_41137791_41140139_41140258_41141047_41141223_41147836_41147947_41149037_41149176_41149760_41150199_41151832_41152013_41152205_41152351_41154994_41155114_41157168_41157409_41158411_41158501_41160641_41160723_41162722_41162780_41164052_41164131_41166598_41166667_41168448_41168600_41168720_41168868_41169502_41169617_41170405_41170572_41172498_41172664_41173622_41173785_41176246_41176529_41176772
WTC11_00060214	chr22	+	209	1	FSM	ENSG00000252859.1	ENST00000517050.1	100	1	-118	9	-118	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGCTATGATTTTT	41168067	False	NA	NA	False	NA	NA	NA	41168098	41168307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41168100_41168300
WTC11_00060215	chr22	+	4708	2	FSM	ENSG00000100393.14	ENST00000635083.1	613	2	-933	-3162	-933	0	multi-exon	FALSE	canonical	3	247	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTTTGTTTCACTTG	41175101	False	NA	22	True	AATAAA	-17	NA	41175125	41180077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41176529_41176772
WTC11_00060216	chr22	+	756	6	FSM	ENSG00000100395.15	ENST00000489136.5	751	6	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	95.8302666175984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCTCCCGTCAGCTGT	41202746	True	NA	NA	False	NA	NA	NA	41205296	41217173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41205387_41206006_41206126_41209695_41209934_41213892_41214027_41216138_41216263_41217122
WTC11_00060217	chr22	+	3203	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	-15	1	-5	0	multi-exon	TRUE	canonical	3	181	junction_3	21.0916897141979	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCGTTTGTTAGATCTC	41202746	True	NA	11	True	ATTAAA	-16	NA	41205296	41231270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
WTC11_00060220	chr22	+	3113	16	ISM	ENSG00000100395.15	ENST00000216237.10	3189	17	4384	1	0	0	3prime_fragment	FALSE	canonical	3	181	junction_2	20.8923165036549	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCGTTTGTTAGATCTC	41207145	False	NA	11	True	ATTAAA	-16	NA	41209695	41231270	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
WTC11_00060221	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5.86786316999793	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	41292219	True	NA	4	True	AATAAA	-15	NA	41301524	41360147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
WTC11_00060222	chr22	+	4387	4	FSM	ENSG00000167074.15	ENST00000266304.9	4381	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	36	junction_3	3.77123616632825	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGATTGTCTTTTCTG	41381361	True	NA	17	True	ATTAAA	-17	NA	41381935	41399326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41382202_41387350_41387669_41394095_41394317_41395744
WTC11_00060225	chr22	+	1468	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	-11	3	0	-3	multi-exon	FALSE	canonical	3	33	junction_9	160.561591582041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTGAAAAGAGATTT	NA	False	NA	14	True	AATAAA	-29	NA	41469105	41521587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
WTC11_00060226	chr22	+	3074	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	-47	-293	-36	0	multi-exon	FALSE	canonical	3	488	junction_7	45.1025743670234	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	41469069	41529267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00060227	chr22	+	3230	17	FSM	ENSG00000100412.17	ENST00000678600.1	3230	17	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	46.2158235212789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGAGTGATTGGTG	NA	False	NA	23	True	AAAACA	-20	NA	41469105	41528979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41528023_41528478
WTC11_00060230	chr22	+	3061	18	FSM	ENSG00000100412.17	ENST00000677532.1	3037	18	-24	0	1	0	multi-exon	FALSE	canonical	3	6	junction_1	178.672188280806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	41467119	True	NA	NA	False	NA	NA	NA	41469112	41529273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41469347_41469509_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00060232	chr22	+	3956	11	FSM	ENSG00000100412.17	ENST00000677492.1	3956	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_6	52.4900943035922	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	41516567	False	NA	NA	False	NA	NA	NA	41516581	41529267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00060234	chr22	+	1162	4	ISM	ENSG00000100412.17	ENST00000676883.1	3016	6	2491	491	2491	-198	3prime_fragment	FALSE	canonical	3	547	junction_1	29.8105126870818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTTAAAATAACTTTTT	41525801	False	NA	-19	True	NA	NA	NA	41525844	41528776	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00060235	chr22	+	2607	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	-77	0	-77	0	multi-exon	FALSE	canonical	2	6	junction_2	2.62466929133727	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	41560922	False	NA	10	True	AATAAA	-19	NA	41560932	41576666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
WTC11_00060236	chr22	+	2130	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	8	10	8	-1	multi-exon	FALSE	canonical	3	97	junction_2	1539.96224596847	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATACTGTTCTTTTGTGTG	41621141	True	NA	13	True	AATAAA	-19	NA	41621170	41664038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060237	chr22	+	2239	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	-124	7	8	0	multi-exon	FALSE	canonical	3	4155	junction_1	452.760575678679	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	41621141	True	NA	9	True	AATAAA	-15	NA	41621170	41664034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060238	chr22	+	2007	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	-10	9	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1520.79093091574	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559230	True	NA	14	True	AATAAA	-20	NA	41621284	41664039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060239	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4868	junction_3	294.393367020139	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559295	True	NA	14	True	AATAAA	-20	NA	41621349	41664039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060240	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1528.91292853961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559406	False	NA	14	True	AATAAA	-20	NA	41621460	41664039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060241	chr22	+	1958	11	FSM	ENSG00000196419.13	ENST00000405506.2	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1601.94381923961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	41621795	False	NA	9	True	AATAAA	-15	NA	41621982	41664034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
WTC11_00060242	chr22	+	5016	4	FSM	ENSG00000184208.12	ENST00000656592.1	5014	4	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	7.40870359029762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	41688372	True	NA	3	True	AATAAA	-15	NA	41688936	41698136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41689305_41690783_41690844_41693462_41693852_41693937
WTC11_00060243	chr22	+	5074	3	FSM	ENSG00000184208.12	ENST00000472110.3	4852	3	28	-250	-19	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	41688400	True	NA	3	True	AATAAA	-15	NA	41688964	41698136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41689305_41690783_41690844_41693462
WTC11_00060245	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	9.42956343987709	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	41797623	True	NA	11	True	AATAAA	-20	NA	41800678	41832164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
WTC11_00060246	chr22	+	5365	20	FSM	ENSG00000198911.12	ENST00000612482.4	5365	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	259.873163181249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGTGTGTGAGGGTCTG	NA	False	NA	20	True	AATAAA	-22	NA	41833078	41907307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
WTC11_00060247	chr22	+	5237	19	FSM	ENSG00000198911.12	ENST00000361204.9	5237	19	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_9	64.7199093530474	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	41813286	True	NA	18	True	AATAAA	-20	NA	41833104	41907305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
WTC11_00060248	chr22	+	5699	22	FSM	ENSG00000198911.12	ENST00000424354.5	5699	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_16	362.914731088194	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGTGTGTGAGGGTCT	41813345	True	NA	19	True	AATAAA	-21	NA	41833163	41907306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41899236_41899554_41900019_41900123_41900329_41900499_41902969_41903156_41904862_41904975_41905439
WTC11_00060252	chr22	+	2654	11	FSM	ENSG00000100167.21	ENST00000396426.7	2586	11	-68	0	-68	0	multi-exon	FALSE	canonical	3	47	junction_10	34.8311642067847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	41976730	False	NA	21	True	ACTAAA	-21	NA	41976741	41998221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620_41994715_41996901
WTC11_00060253	chr22	+	4649	10	FSM	ENSG00000100167.21	ENST00000396425.7	4649	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	13.3869293171814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	41976283	False	NA	21	True	ACTAAA	-21	NA	41976933	41998221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620
WTC11_00060255	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	42073794	True	NA	8	True	AGTAAA	-16	NA	42074247	42079438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42074342_42075570_42075653_42077279
WTC11_00060256	chr22	+	654	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	-63	0	-63	0	multi-exon	TRUE	canonical	3	39	junction_1	318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	42079174	False	NA	6	True	AATAAA	-15	NA	42079627	42083353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42079906_42081924_42082066_42083118
WTC11_00060257	chr22	+	1571	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	-9	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	10	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	42079237	False	NA	NA	False	AATAAA	-13	NA	42079690	42084284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42079955_42081924_42082066_42083118
WTC11_00060258	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	42090955	42125349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
WTC11_00060259	chr22	+	4538	2	FSM	ENSG00000182057.5	ENST00000609564.2	4829	2	0	291	0	-291	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTGTGAAAAAGAAAGGAAG	42269513	True	NA	NA	False	NA	NA	NA	42269702	42279202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42270026_42274987
WTC11_00060260	chr22	+	596	3	FSM	ENSG00000172250.17	ENST00000434218.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCCCCCCCCCCAACT	42501441	False	NA	NA	False	NA	NA	NA	42501595	42502653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42501775_42501918_42502033_42502350
WTC11_00060261	chr22	+	596	3	FSM	ENSG00000183569.18	ENST00000472589.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCCCCCCCCCCCCAA	42554754	False	NA	NA	False	NA	NA	NA	42554908	42555966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42555088_42555231_42555346_42555663
WTC11_00060262	chr22	+	664	1	FSM	ENSG00000270022.3	ENST00000602478.1	664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACTCTAAAAATACACTC	42614453	True	NA	NA	False	NA	NA	NA	42615243	42615907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42615200_42615900
WTC11_00060263	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.0156097709407	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	43110279	True	NA	20	True	AATAAA	-17	NA	43110749	43129712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
WTC11_00060264	chr22	+	919	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	-84	1	-72	0	multi-exon	FALSE	canonical	3	232	junction_1	47.9884245301811	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	NA	False	NA	17	True	AATAAA	-17	NA	43151474	43163241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
WTC11_00060265	chr22	+	722	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	-85	-1	-85	0	multi-exon	FALSE	canonical	3	37	junction_1	150.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	NA	False	NA	18	True	AATAAA	-18	NA	43151461	43163242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43151605_43161051_43161191_43162802
WTC11_00060267	chr22	+	6655	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	-20	-3882	-7	3882	multi-exon	FALSE	canonical	3	35	junction_1	9.78519289539046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCTGTGTACATCCTT	43922110	True	NA	26	True	AATAAA	-17	NA	43923784	43951464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
WTC11_00060268	chr22	+	1144	7	NIC	ENSG00000100344.11	novel	2753	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	20.2539433746177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGACTTCCAAACATATT	43922130	True	NA	NA	False	AATAAA	-17	NA	43923804	43939393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939335
WTC11_00060269	chr22	+	422	4	FSM	ENSG00000100344.11	ENST00000497129.1	422	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.4845626053867	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGACTTCCAAACATATT	43932996	False	NA	NA	False	AATAAA	-17	NA	43933006	43939393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43933088_43934605_43934667_43937050_43937273_43939335
WTC11_00060270	chr22	+	1498	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCTGTGTACATCCTT	43949947	False	NA	26	True	AATAAA	-17	NA	43949966	43951464	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_43950000_43951500
WTC11_00060271	chr22	+	1712	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	-20	0	-20	0	multi-exon	TRUE	canonical	3	485	junction_8	397.76765472177	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43949471	True	NA	26	True	AATAAA	-17	NA	43955421	43996529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
WTC11_00060272	chr22	+	349	1	FSM	ENSG00000224856.2	ENST00000430869.2	322	1	4	-31	4	31	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGCTCTTGAAAAAAAAA	43951080	False	NA	NA	False	AATAAA	-12	NA	43957030	43957379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43957000_43957400
WTC11_00060273	chr22	+	2149	8	FSM	ENSG00000100347.15	ENST00000474323.5	2368	8	219	0	219	0	multi-exon	FALSE	canonical	3	485	junction_1	541.045209171421	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43974788	False	NA	26	True	AATAAA	-17	NA	43974813	43996529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
WTC11_00060274	chr22	+	5409	13	FSM	ENSG00000188677.15	ENST00000338758.12	5394	13	-15	0	-15	0	multi-exon	FALSE	canonical	1	3	junction_3	7.41994309651736	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTCCACCGTCTTT	44023901	True	NA	3	True	AATAAA	-14	NA	44024286	44172939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44024452_44093927_44094018_44100052_44100124_44119037_44119141_44131486_44131628_44132893_44133010_44136459_44136519_44140123_44140144_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
WTC11_00060275	chr22	+	1751	9	FSM	ENSG00000186654.21	ENST00000611394.4	1843	9	92	0	-74	0	multi-exon	TRUE	canonical	3	15	junction_1	36.8474473335671	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	44668638	44737681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44668806_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
WTC11_00060276	chr22	+	1767	9	FSM	ENSG00000186654.21	ENST00000006251.11	1767	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	38.9863758254085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTCTGCAGTGCCTG	44677017	False	NA	11	True	AATAAA	-14	NA	44677056	44737680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44677241_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
WTC11_00060279	chr22	+	1873	8	FSM	ENSG00000186654.21	ENST00000336985.11	1872	8	-3	2	-3	-1	multi-exon	FALSE	canonical	3	88	junction_6	15.4998354171644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATGTCTGCAGTGCCT	44701168	True	NA	10	True	AATAAA	-13	NA	44702200	44737679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
WTC11_00060280	chr22	+	1735	7	NIC	ENSG00000186654.21	novel	1872	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_6	31.6460459176533	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTCTGCAGTGCCTG	44701171	True	NA	11	True	AATAAA	-14	NA	44702203	44737680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44736771
WTC11_00060282	chr22	+	1430	7	FSM	ENSG00000186654.21	ENST00000432916.5	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.185589578882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTGTCAACCTGGC	44701453	False	NA	-7	True	NA	NA	NA	44702485	44737662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731734_44731822_44732250_44732392_44736771
WTC11_00060283	chr22	+	2917	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	-20	8	-4	-8	multi-exon	FALSE	canonical	3	311	junction_1	38.1307043900837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	44744901	True	NA	NA	False	NA	NA	NA	44752553	44850955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
WTC11_00060284	chr22	+	1633	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	-21	3	-4	-3	multi-exon	FALSE	canonical	3	311	junction_1	61.6253677507341	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCATTTGTTAGGATGG	44744901	True	NA	105	True	NA	NA	NA	44752553	44862781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
WTC11_00060285	chr22	+	1726	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	-4	3	-4	-3	multi-exon	FALSE	canonical	0	0	junction_5	162.131291105559	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCATTTGTTAGGATGG	44744901	True	NA	105	True	NA	NA	NA	44752553	44862781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
WTC11_00060287	chr22	+	1483	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	4	0	0	multi-exon	FALSE	canonical	3	28	junction_10	117.379725676967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744950	True	NA	108	True	NA	NA	NA	44752602	44862784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
WTC11_00060289	chr22	+	1474	10	FSM	ENSG00000241484.10	ENST00000389772.8	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	137.443950416789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44786412	True	NA	108	True	NA	NA	NA	44786456	44862784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
WTC11_00060290	chr22	+	3979	2	FSM	ENSG00000241484.10	ENST00000469342.1	363	2	-3408	-208	-3408	-113	multi-exon	FALSE	canonical	3	577	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44856240	False	NA	-5	True	NA	NA	NA	44856252	44862671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44859835_44862274
WTC11_00060291	chr22	+	812	4	FSM	ENSG00000093000.19	ENST00000430547.5	537	4	-122	-153	-47	0	multi-exon	FALSE	canonical	3	22	junction_3	307.994588697053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATATTTAGCAAACAT	45163867	False	NA	NA	False	AATACA	-40	NA	45163877	45178467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45178237
WTC11_00060292	chr22	+	5150	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	1	0	1	0	multi-exon	FALSE	canonical	3	614	junction_2	78.4724051329315	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	45149724	True	NA	NA	False	AATAAA	-23	NA	45163925	45188017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
WTC11_00060298	chr22	+	5247	9	NIC	ENSG00000093000.19	novel	2059	9	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	291.333571700894	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAATGTGTGAGTCTT	45149809	True	NA	NA	False	AATAAA	-15	NA	45164010	45188009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_45164297_45168167_45168247_45170987_45171178_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
WTC11_00060305	chr22	+	1996	5	FSM	ENSG00000100376.12	ENST00000405673.5	1612	5	-328	-56	-138	56	multi-exon	TRUE	canonical	2	15	junction_4	38.8522843601248	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGTAGTTTCATGTGAC	45309762	False	NA	64	True	ACTAAA	-4	NA	45309795	45329468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45328391
WTC11_00060306	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	6.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45308117	True	NA	3	True	AATAAA	-14	NA	45309933	45341955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
WTC11_00060307	chr22	+	769	4	FSM	ENSG00000100376.12	ENST00000477714.1	756	4	-13	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	4.18993502999218	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGAGGTCTTTGGCCGG	45309914	False	NA	NA	False	NA	NA	NA	45310123	45328241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841
WTC11_00060308	chr22	+	2750	8	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-96	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	30.2263569267159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAACCCTGTGTGCTCA	45308021	True	NA	-4	True	AATAAA	-7	NA	45309837	45341948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_45310184_45322370_45322427_45323174_45323428_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
WTC11_00060310	chr22	+	2251	15	FSM	ENSG00000077942.19	ENST00000262722.11	2251	15	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_14	78.60921169472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCGTGCCTTGGTTTT	45487791	True	NA	37	True	AATAAA	-27	NA	45502882	45563362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
WTC11_00060311	chr22	+	2355	16	FSM	ENSG00000077942.19	ENST00000402984.7	2355	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	320.48373160306	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTGAGCCTCGCGTG	45487791	True	NA	27	True	AATAAA	-17	NA	45502882	45563352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45523090_45523205_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
WTC11_00060312	chr22	+	2904	17	FSM	ENSG00000077942.19	ENST00000327858.11	2904	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_14	293.539066554607	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGCATGAGAGTCT	45487791	True	NA	18	True	AATAAA	-21	NA	45502882	45601135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45574510_45574654_45576976_45577109_45600306
WTC11_00060315	chr22	+	753	8	FSM	ENSG00000077942.19	ENST00000437711.1	753	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	331.662355969662	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGCAGTTTCCGCTGC	45525638	True	NA	NA	False	NA	NA	NA	45525674	45542214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535255_45535338_45541228_45541373_45542154
WTC11_00060317	chr22	+	22206	1	FSM	ENSG00000280383.1	ENST00000623075.1	23112	1	1170	-264	1170	264	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAATTGACCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	45658188	45680394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45658200_45680400
WTC11_00060318	chr22	+	3533	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	-239	0	239	multi-exon	FALSE	canonical	3	795	junction_4	72.335535887046	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTTACAAAATTTGTAAA	45658551	True	NA	NA	False	AAAAAG	-7	NA	45671833	45845546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
WTC11_00060319	chr22	+	513	4	FSM	ENSG00000130638.17	ENST00000451241.2	514	4	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_3	472.462344178525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTGATTCCCCATT	45738629	True	NA	NA	False	NA	NA	NA	45738738	45811793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45738840_45740368_45740539_45806958_45807105_45811697
WTC11_00060320	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	46013400	True	NA	25	True	CATAAA	-19	NA	46013605	46015498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46013811_46014496
WTC11_00060321	chr22	+	2588	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	-22	0	-22	0	multi-exon	FALSE	canonical	3	137	junction_13	15.9351496410558	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	46265280	True	NA	10	True	ATTAAA	-23	NA	46267985	46294008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
WTC11_00060322	chr22	+	1657	5	FSM	ENSG00000075234.17	ENST00000451998.1	582	5	0	-1075	0	0	multi-exon	FALSE	canonical	3	11	junction_3	76.0279553848451	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	NA	False	NA	10	True	ATTAAA	-23	NA	46288509	46294008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46288589_46289401_46289562_46289825_46289900_46292202_46292329_46292790
WTC11_00060323	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	64.9816248661722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	46294193	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
WTC11_00060324	chr22	+	4969	12	Fusion	ENSG00000100416.15_ENSG00000075218.19	novel	2983	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	67.0546834942377	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	46294195	True	NA	15	True	AATAAA	-16	NA	46296871	46333699	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046_46331733_46333081
WTC11_00060329	chr22	+	1817	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	113	junction_3	117.65780052632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335333	True	NA	9	True	AATAAA	-12	NA	46335376	46357335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
WTC11_00060330	chr22	+	1906	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	-24	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	99.991249617154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335357	False	NA	11	True	AATAAA	-14	NA	46335400	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
WTC11_00060331	chr22	+	1854	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	-24	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	101.647660639979	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335357	False	NA	11	True	AATAAA	-14	NA	46335400	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
WTC11_00060332	chr22	+	1712	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	-24	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	159.849880747531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335357	False	NA	11	True	AATAAA	-14	NA	46335400	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
WTC11_00060336	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_4	89.1383194815787	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	46329596	True	NA	14	True	AATAAA	-17	NA	46335713	46357340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
WTC11_00060340	chr22	+	1401	7	FSM	ENSG00000100416.15	ENST00000465378.6	1401	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	144.052941656878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGGATGTGCCTGCCGG	46335794	True	NA	NA	False	NA	NA	NA	46335921	46352911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263
WTC11_00060345	chr22	+	2933	2	FSM	ENSG00000100416.15	ENST00000491612.1	2933	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46352806	False	NA	11	True	AATAAA	-14	NA	46352828	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46353868_46355443
WTC11_00060346	chr22	+	2653	3	FSM	ENSG00000100416.15	ENST00000485559.1	2653	3	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTCTGATCGCTGCTT	46353494	False	NA	13	True	AATAAA	-16	NA	46353516	46357339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46355589_46355989_46356073_46356841
WTC11_00060347	chr22	+	1860	2	FSM	ENSG00000100416.15	ENST00000470831.1	1860	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	46354657	False	NA	12	True	AATAAA	-15	NA	46354709	46357338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46356073_46356841
WTC11_00060348	chr22	+	4547	19	NIC	ENSG00000075240.17	novel	4315	18	NA	NA	-62	-2	combination_of_known_junctions	TRUE	canonical	3	73	junction_3	10.4682058316281	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGGCTGTCTGCCTCCTT	46575603	True	NA	31	True	AATAAA	-24	NA	46577066	46679788	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46577291_46626750_46626962_46637839_46637961_46658186_46658308_46661380_46661443_46663039_46663173_46663837_46663864_46664025_46664118_46665614_46665707_46666824_46666874_46668095_46668168_46668688_46668733_46668798_46668909_46672842_46672998_46673669_46673815_46674656_46674751_46675467_46675553_46676599_46676669_46677146
WTC11_00060349	chr22	+	4315	18	FSM	ENSG00000075240.17	ENST00000361034.7	4315	18	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	10.7484609021341	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTGTCTGCCTCCTTGG	NA	False	NA	33	True	AATAAA	-26	NA	46626760	46679790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46626962_46637839_46637961_46658186_46658308_46661380_46661443_46663039_46663173_46663837_46663864_46664025_46664118_46665614_46665707_46666824_46666874_46668095_46668168_46668688_46668733_46668798_46668909_46672842_46672998_46673669_46673815_46674656_46674751_46675467_46675553_46676599_46676669_46677146
WTC11_00060350	chr22	+	3780	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	-22	0	11	0	multi-exon	TRUE	canonical	3	103	junction_1	14.7843291660085	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	46759915	True	NA	6	True	AATAAA	-14	NA	46762627	47175693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
WTC11_00060351	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.3402197828378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46759959	True	NA	19	True	AATAAA	-13	NA	46762671	47174083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
WTC11_00060354	chr22	+	2964	13	NIC	ENSG00000054611.14	novel	2636	14	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	31.8393318955589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46762996	False	NA	19	True	AATAAA	-13	NA	46763271	47174083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46764287_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
WTC11_00060355	chr22	+	1994	13	FSM	ENSG00000054611.14	ENST00000406733.1	2267	13	273	0	273	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2793097580867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTTGCGCTGACCCGGG	NA	False	NA	28	True	AATAAA	-22	NA	46774199	47174092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46774236_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
WTC11_00060356	chr22	+	2524	4	FSM	ENSG00000219438.9	ENST00000402357.6	2524	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	23.9211668240122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTTTTGTTCCCTGG	48489461	True	NA	6	True	AATAAA	-19	NA	48489552	48751932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_48489705_48646596_48646747_48707716_48707845_48749838
WTC11_00060357	chr22	+	626	4	FSM	ENSG00000219438.9	ENST00000336769.9	546	4	0	-80	0	80	multi-exon	FALSE	canonical	0	0	junction_3	168.812190186478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGGTAGAATGACACAT	48489573	False	NA	NA	False	NA	NA	NA	48489591	48850992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_48489705_48646596_48646747_48707716_48707845_48850757
WTC11_00060358	chr22	+	3198	4	FSM	ENSG00000219438.9	ENST00000358295.9	2638	4	-556	-4	-556	4	multi-exon	FALSE	canonical	1	4	junction_1	180.77671924842	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTGTTCCCTGGGCGT	48575510	False	NA	10	True	AATAAA	-23	NA	48575749	48751936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_48576572_48646596_48646747_48707716_48707845_48749838
WTC11_00060359	chr22	+	6917	2	FSM	ENSG00000100426.7	ENST00000216268.6	6893	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	127	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTATGTTTGTAAT	49851349	True	NA	27	True	AATAAA	-23	NA	49853819	49890080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49853990_49883333
WTC11_00060360	chr22	+	1429	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	470	junction_5	82.4802258382031	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	49913853	True	NA	38	True	AATAAA	-28	NA	49918632	49927537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
WTC11_00060361	chr22	+	1577	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	-2	2	-1	1	multi-exon	FALSE	canonical	3	30	junction_5	211.095736574664	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGGCGTGGGTTTGTCTC	49913853	True	NA	39	True	AATAAA	-29	NA	49918632	49927538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
WTC11_00060366	chr22	+	2598	2	FSM	ENSG00000184164.15	ENST00000487969.1	2622	2	24	0	24	0	multi-exon	FALSE	canonical	3	581	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGGAGAACGGGCGTG	49923222	True	NA	29	True	AATAAA	-19	NA	49923233	49927528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49925558_49927254
WTC11_00060367	chr22	+	2415	6	FSM	ENSG00000198355.5	ENST00000360612.5	2102	6	-313	0	-309	0	multi-exon	TRUE	canonical	3	352	junction_1	22.4908870434227	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	49960446	False	NA	19	True	ATTAAA	-16	NA	49960458	49964072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49961033_49961124_49961235_49961317_49961369_49961441_49961812_49962688_49962866_49962939
WTC11_00060369	chr22	+	1458	1	Genic_Genomic	ENSG00000073150.14	novel	NA	NA	NA	NA	8173	96	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGCGTGACAAGGGGC	50178776	False	NA	107	True	GGGGCT	-5	NA	50178933	50180391	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_+_50178900_50180400
WTC11_00060370	chr22	+	2328	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	-23	0	-23	0	multi-exon	TRUE	canonical	3	279	junction_1	72.8755069016528	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179455	True	NA	16	True	AATAAA	-16	NA	50185889	50199595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
WTC11_00060371	chr22	+	2420	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	-16	0	-11	0	multi-exon	FALSE	canonical	3	102	junction_1	131.291660055009	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179467	True	NA	16	True	AATAAA	-16	NA	50185901	50199595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
WTC11_00060372	chr22	+	2341	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	-15	3	-11	0	multi-exon	FALSE	canonical	3	102	junction_1	124.403862430611	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179467	True	NA	16	True	AATAAA	-16	NA	50185901	50199595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
WTC11_00060375	chr22	+	2287	9	FSM	ENSG00000073169.15	ENST00000380903.7	2283	9	-5	1	-5	-1	multi-exon	FALSE	canonical	3	206	junction_2	30.2528407757024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTCTGTGGTCATT	50198833	True	NA	8	True	AATAAA	-16	NA	50201005	50217615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50201591_50206316_50206521_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
WTC11_00060376	chr22	+	1626	8	FSM	ENSG00000073169.15	ENST00000492092.1	1626	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	91.4174100330066	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	50204269	False	NA	9	True	AATAAA	-17	NA	50206441	50217616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50206521_50208487_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
WTC11_00060378	chr22	+	4117	24	FSM	ENSG00000100239.16	ENST00000612753.5	4094	24	-23	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	21.8123982710862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	50337053	True	NA	20	True	AATAAA	-21	NA	50343303	50445090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
WTC11_00060379	chr22	+	3298	23	FSM	ENSG00000100239.16	ENST00000395744.7	3293	23	-5	0	-1	0	multi-exon	FALSE	canonical	3	33	junction_14	32.2108241136834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAGTTGAAACCAGTT	50337075	True	NA	21	True	AATAAA	-16	NA	50343325	50444374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
WTC11_00060382	chr22	+	4289	2	FSM	ENSG00000128165.9	ENST00000395738.2	4276	2	-13	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCAGAATCATCTTTTC	50481082	True	NA	NA	False	AATAAA	-23	NA	50481542	50486440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50481958_50482566
WTC11_00060383	chr22	+	1407	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	-19	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	11.9419167222017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	50507456	True	NA	4	True	ATTAAA	-16	NA	50508223	50519752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
WTC11_00060385	chr22	+	2550	19	FSM	ENSG00000025770.19	ENST00000395701.7	2077	19	-20	-453	0	453	multi-exon	FALSE	canonical	2	184	junction_14	26.0104442460436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCACTGGAGGCAAAC	50507456	True	NA	NA	False	NA	NA	NA	50508223	50523925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016
WTC11_00060386	chr22	+	3337	20	FSM	ENSG00000025770.19	ENST00000420993.7	3337	20	0	0	0	0	multi-exon	TRUE	canonical	2	184	junction_14	25.3315958970713	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTAACTCTCTGGCTT	50507456	True	NA	10	True	AATAAA	-18	NA	50508223	50524780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
WTC11_00060388	chr22	+	2449	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	-453	0	453	multi-exon	FALSE	canonical	2	31	junction_15	58.3235791871236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCACTGGAGGCAAAC	50507492	True	NA	NA	False	NA	NA	NA	50508259	50523925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
WTC11_00060389	chr22	+	1887	19	NIC	ENSG00000025770.19	novel	3337	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	65.2788888794328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507496	True	NA	18	True	AATAAA	-18	NA	50508263	50523472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_50508446_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
WTC11_00060392	chr22	+	962	2	FSM	ENSG00000205559.5	ENST00000656328.1	940	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	13	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGACTCAGTCTCAAAA	50582494	True	NA	NA	False	NA	NA	NA	50583097	50584333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50583324_50583597
WTC11_00060394	chr22	+	4271	12	FSM	ENSG00000008735.14	ENST00000329492.6	5700	12	-196	1625	-196	-1625	multi-exon	FALSE	canonical	2	7	junction_1	5.44392906239268	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGGGTCCCTCTGTCTG	50600479	True	NA	NA	False	NA	NA	NA	50600596	50612353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50600884_50601788_50601895_50603222_50603499_50603625_50603720_50603840_50605065_50605367_50605444_50605561_50605735_50605824_50605935_50606657_50606766_50606920_50606992_50610211_50610311_50610706
WTC11_00060396	chr22	+	1007	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	19	105	4	0	multi-exon	FALSE	canonical	3	178	junction_1	46.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	50780525	True	NA	NA	False	AAGAAA	-20	NA	50783758	50799434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50783865_50785172_50785294_50798654
WTC11_00060397	chr22	+	703	4	NIC	ENSG00000184319.17	novel	857	4	NA	NA	5	-26	intron_retention	FALSE	canonical	1	1	junction_3	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATTTTTAAAATATTT	50780568	True	NA	NA	False	NA	NA	NA	50783801	50789153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_50784073_50785172_50785294_50788749_50788799_50788891
WTC11_00060398	chr22	+	3033	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	14	-1763	4	-6	multi-exon	FALSE	canonical	3	109	junction_1	81	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTGCTCAGACTCAG	50780525	True	NA	NA	False	ATTAAA	-14	NA	50783758	50801303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784022_50785172_50785294_50798654
WTC11_00060399	chr22	-	2282	1	FSM	ENSG00000215268.3	ENST00000417863.1	2260	1	-7	-15	-7	15	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGTGTGAGCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	15564283	15562001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_15562000_15564300
WTC11_00060400	chr22	-	846	1	FSM	ENSG00000215270.3	ENST00000398242.2	1049	1	114	89	114	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGCCCCTGACGCTG	NA	False	NA	NA	False	NA	NA	NA	15855129	15854283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_15854300_15855100
WTC11_00060401	chr22	-	5143	1	FSM	ENSG00000183307.4	ENST00000331437.4	5064	1	-69	-10	-62	10	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTTTGTTTTAAGATC	NA	False	NA	6	True	AATAAA	-28	NA	17121429	17116286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17116300_17121400
WTC11_00060402	chr22	-	3626	3	FSM	ENSG00000069998.12	ENST00000477157.5	3614	3	0	-12	0	1	multi-exon	FALSE	canonical	3	1321	junction_2	40.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTGGAGTGCACTA	-17143596	False	NA	0	True	AATAAA	-40	NA	17143647	17137509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17138358_17138549_17138739_17141058
WTC11_00060403	chr22	-	1809	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	-10	0	1	multi-exon	FALSE	canonical	3	841	junction_7	195.592141238562	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTGGAGTGCACTA	-17147914	True	NA	0	True	AATAAA	-40	NA	17159277	17137509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
WTC11_00060405	chr22	-	2047	7	NNC	ENSG00000069998.12	novel	1799	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_4	500.31545604304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGAGATGTGGGGCTTT	-17159147	False	NA	-72	True	NA	NA	NA	17159168	17137581	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143755_17145023_17145118_17148447_17148561_17159125
WTC11_00060408	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	6.52346193026031	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	-17199750	False	NA	-4	True	AATAAA	-13	NA	17199783	17179305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
WTC11_00060409	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	30.5509308368829	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	-17622583	True	NA	1	True	NA	NA	NA	17628749	17592135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
WTC11_00060410	chr22	-	1241	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	-33	0	0	multi-exon	FALSE	canonical	2	4	junction_4	148.379271339582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	-17622581	True	NA	1	True	NA	NA	NA	17628747	17592135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
WTC11_00060412	chr22	-	5194	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	-3017	0	3017	multi-exon	FALSE	canonical	3	314	junction_5	70.4630399571293	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-17770882	True	NA	NA	False	NA	NA	NA	17774469	17731120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
WTC11_00060413	chr22	-	9626	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	-7131	0	7131	multi-exon	FALSE	canonical	3	30	junction_5	170.168622254516	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTGCACAATGTCAGAAT	-17774005	False	3587	NA	False	NA	NA	NA	17774016	17727006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
WTC11_00060414	chr22	-	9309	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	-45	-8357	-45	7131	multi-exon	FALSE	canonical	3	67	junction_4	174.52363736755	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTGCACAATGTCAGAAT	-17774529	False	NA	NA	False	NA	NA	NA	17774540	17727006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
WTC11_00060415	chr22	-	5015	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	-26	-3110	-20	3073	multi-exon	FALSE	canonical	3	73	junction_3	196.832133781273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCTGTAATATGGGAAT	-17770928	True	NA	NA	False	AAAAAG	-36	NA	17774515	17731064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
WTC11_00060416	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	180.504404378397	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	-17774654	False	NA	NA	False	NA	NA	NA	17774665	17735551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
WTC11_00060417	chr22	-	3922	3	FSM	ENSG00000243156.9	ENST00000252134.11	917	3	-114	-2891	-114	0	multi-exon	FALSE	canonical	3	16	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGTTTCTTAAGTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	17791781	17787648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17790917_17790997_17791072_17791201
WTC11_00060418	chr22	-	3687	5	FSM	ENSG00000093100.13	ENST00000476405.1	4328	5	644	-3	644	3	multi-exon	FALSE	canonical	3	12	junction_4	2.8613807855649	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGTTTCTTAAGTCAT	-17810840	False	NA	-18	True	AATAAA	-16	NA	17810853	17787648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702
WTC11_00060421	chr22	-	567	1	FSM	ENSG00000243156.9	ENST00000578905.1	2532	1	2237	-272	2237	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAATCACTGGAACCCA	NA	False	NA	NA	False	NA	NA	NA	17840245	17839678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17839700_17840200
WTC11_00060422	chr22	-	7597	19	NIC	ENSG00000243156.9	novel	9447	32	NA	NA	20	93	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	3.39934634239519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCACTGTGGCTCAGGAC	-17999217	True	NA	85	True	NA	NA	NA	18001481	17860069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17899447_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
WTC11_00060423	chr22	-	1699	1	FSM	ENSG00000225335.3	ENST00000607927.1	1699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTCTCTTTTGTTCA	NA	False	NA	NA	False	TATAAA	-16	NA	18078884	18077185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18077200_18078900
WTC11_00060424	chr22	-	20390	1	FSM	ENSG00000280007.1	ENST00000623543.1	20396	1	3	3	3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGACAGGCGCGCCGG	NA	False	NA	NA	False	NA	NA	NA	18131151	18110761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18110800_18131200
WTC11_00060425	chr22	-	2425	3	FSM	ENSG00000274602.5	ENST00000610959.4	2425	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	56.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18534054_18535244_18535329_18535858
WTC11_00060426	chr22	-	1820	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	-22	-11	-22	0	multi-exon	FALSE	canonical	3	54	junction_3	66.4646940529749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537887	18533645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
WTC11_00060427	chr22	-	1241	5	ISM	ENSG00000274602.5	ENST00000652586.1	2139	17	14736	-10	0	0	3prime_fragment	FALSE	canonical	3	54	junction_3	60.8620366073959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649_18536809_18537291
WTC11_00060428	chr22	-	379	4	ISM	ENSG00000274602.5	ENST00000612579.4	1703	16	686	9714	241	4292	internal_fragment	FALSE	canonical	3	31	junction_1	14.9666295470958	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAAGAAGGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	18548112	18543718	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18543738_18544651_18544782_18547245_18547374_18548010
WTC11_00060429	chr22	-	5500	1	FSM	ENSG00000275793.1	ENST00000619918.1	6105	1	547	58	547	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCAGAATGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	18611372	18605872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18605900_18611400
WTC11_00060430	chr22	-	667	2	ISM	ENSG00000100033.17	ENST00000313755.9	2961	6	8053	-2	8018	1	3prime_fragment	FALSE	canonical	3	92	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGAGCCCTTTGCCCTCA	-18913488	False	NA	NA	False	AATAAA	-16	NA	18913521	18912779	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18913363_18913437
WTC11_00060431	chr22	-	4739	3	FSM	ENSG00000100033.17	ENST00000609229.1	4739	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	74	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGCGTGAGCAGCAGG	-18921529	False	NA	NA	False	NA	NA	NA	18921554	18914529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18916989_18918315_18918492_18919450
WTC11_00060438	chr22	-	4820	11	FSM	ENSG00000070413.20	ENST00000389262.8	4814	11	0	-6	0	2	multi-exon	TRUE	canonical	1	2	junction_6	204.877133912011	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTCCTTGGTGTGGC	-19119048	True	NA	0	True	AATAAA	-21	NA	19122407	19036279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19060565_19060956_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
WTC11_00060439	chr22	-	4510	10	NNC	ENSG00000070413.20	novel	4438	10	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	154.24511517567	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-2	True	AATAAA	-19	NA	19122472	19036281	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065076_19068099_19068226_19089367_19089491_19122127
WTC11_00060441	chr22	-	4165	9	NIC	ENSG00000070413.20	novel	4814	11	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	184.986443760077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGGTTAGTCCTTGGT	-19119025	True	NA	-5	True	AATAAA	-16	NA	19122384	19036284	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19039122_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
WTC11_00060442	chr22	-	4427	10	NIC	ENSG00000070413.20	novel	4814	11	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	134	junction_7	113.575992942345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGGTTAGTCCTTGGTG	-19119049	True	NA	-4	True	AATAAA	-17	NA	19122408	19036283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
WTC11_00060444	chr22	-	2244	1	FSM	ENSG00000273311.1	ENST00000609958.1	2214	1	-26	-4	-26	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATCAGGTGTCTCAA	-19048357	False	NA	NA	False	AATAAA	-17	NA	19048401	19046157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19046200_19048400
WTC11_00060447	chr22	-	1488	10	NNC	ENSG00000100075.10	novel	1548	9	NA	NA	0	72173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	773.087716422885	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTGTGGTAAAATACACA	-19178616	False	NA	NA	False	AAAAAG	-9	NA	19178635	19103407	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19103449_19175580_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
WTC11_00060448	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	12.1655250605964	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	-19141737	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
WTC11_00060449	chr22	-	581	2	FSM	ENSG00000100056.12	ENST00000469466.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTCCAGGCACAGAAGGA	-19141745	True	NA	NA	False	NA	NA	NA	19144659	19142849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19142895_19144123
WTC11_00060450	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_8	187.358238076152	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19167078	True	NA	-8	True	AATAAA	-16	NA	19178736	19175580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
WTC11_00060451	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	744.236930940006	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-19178502	False	NA	-20	True	AATAAA	-4	NA	19178521	19175592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
WTC11_00060452	chr22	-	1615	8	FSM	ENSG00000100075.10	ENST00000470922.5	1598	8	0	-17	0	0	multi-exon	FALSE	canonical	3	1968	junction_7	197.030402709421	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-19167081	True	NA	-20	True	AATAAA	-4	NA	19178739	19175592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19178042_19178132_19178241_19178579
WTC11_00060453	chr22	-	804	6	FSM	ENSG00000100075.10	ENST00000461267.1	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	2346	junction_1	112.776947999137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATCACTGGGGTCTTC	-19178461	False	11658	NA	False	NA	NA	NA	19178480	19176666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132
WTC11_00060454	chr22	-	307	2	FSM	ENSG00000100075.10	ENST00000468824.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTTAGCTCCCTGCTCT	-19178616	False	NA	NA	False	NA	NA	NA	19178635	19177989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19178241_19178579
WTC11_00060455	chr22	-	5313	32	FSM	ENSG00000070371.16	ENST00000621271.4	5313	32	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	12.7795687615635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTGCTTGGTGCTGG	-19290962	True	NA	-1	True	ATTAAA	-20	NA	19291685	19179472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
WTC11_00060456	chr22	-	5518	33	FSM	ENSG00000070371.16	ENST00000427926.6	5518	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_24	11.466621055808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTGCTTGGTGCTGG	-19290996	True	NA	-1	True	ATTAAA	-20	NA	19291719	19179472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187557_19187729_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
WTC11_00060457	chr22	-	4225	25	NNC	ENSG00000100084.14	novel	4053	25	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	87	junction_22	48.5309179801907	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	-19429423	True	NA	-2	True	AATAAA	-23	NA	19431696	19330697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405785_19405881_19407183_19407275_19408273_19408594_19410715_19410779_19431439
WTC11_00060459	chr22	-	4053	25	FSM	ENSG00000100084.14	ENST00000263208.5	4053	25	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_22	36.0258153967402	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	-19429460	True	NA	-2	True	AATAAA	-23	NA	19431733	19330697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405785_19405881_19407183_19407275_19408482_19408594_19410715_19410779_19431439
WTC11_00060460	chr22	-	1019	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	-14	0	14	multi-exon	FALSE	canonical	3	492	junction_2	14.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCAAACTGATTTTACAA	-19441374	True	NA	NA	False	AATAAA	-29	NA	19447692	19440871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19441695_19447377_19447546_19447664
WTC11_00060461	chr22	-	3734	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	-14	0	14	multi-exon	FALSE	canonical	3	158	junction_1	167	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCAAACTGATTTTACAA	-19441393	True	NA	NA	False	AATAAA	-29	NA	19447711	19440871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19444391_19447377_19447546_19447664
WTC11_00060462	chr22	-	1382	4	NNC	ENSG00000242259.9	novel	1005	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	180.844316102737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCGGCCATGACCTAC	-19441374	True	NA	NA	False	AATAAA	-13	NA	19447692	19440887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19441695_19444011_19444391_19447377_19447546_19447664
WTC11_00060463	chr22	-	5748	11	FSM	ENSG00000070010.19	ENST00000459854.5	5038	11	0	-710	0	0	multi-exon	FALSE	canonical	3	99	junction_9	285.9031479365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466171	True	NA	-18	True	ATTAAA	-14	NA	19479172	19449910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
WTC11_00060464	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_10	103.828370778475	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466192	True	NA	-18	True	ATTAAA	-14	NA	19479193	19449910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
WTC11_00060465	chr22	-	1667	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	-660	0	-50	multi-exon	FALSE	canonical	3	89	junction_1	276.077004469214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTACTCCCCAACTCCC	-19466171	True	NA	-68	True	AATGAA	-30	NA	19479172	19449960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
WTC11_00060469	chr22	-	1512	1	FSM	ENSG00000184113.10	ENST00000618236.2	1384	1	-132	4	-132	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCCACCTGTGTCCTG	NA	False	NA	-6	True	AGTAAA	-11	NA	19524542	19523030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19523000_19524500
WTC11_00060470	chr22	-	204	1	FSM	ENSG00000281548.1	ENST00000629028.1	1637	1	1454	-21	1454	21	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTTAGTGTACAGACTG	NA	False	NA	NA	False	NA	NA	NA	19565385	19565181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19565200_19565400
WTC11_00060471	chr22	-	6639	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	3	0	-3	multi-exon	FALSE	canonical	3	107	junction_5	31.1113864581272	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAGCATAACAGCCATT	-19851261	True	NA	NA	False	AATAAA	-12	NA	19854874	19783225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
WTC11_00060472	chr22	-	1542	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	48	junction_7	48.5588218933848	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851193	True	NA	-9	True	AATAAA	-14	NA	19854806	19788414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
WTC11_00060473	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	32.4602320796797	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851230	True	NA	-9	True	AATAAA	-14	NA	19854843	19788414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
WTC11_00060474	chr22	-	1176	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	57.8909319323847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851261	True	NA	-9	True	AATAAA	-14	NA	19854874	19788414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
WTC11_00060475	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	76.9051363694259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	-19851193	True	NA	-58	True	NA	NA	NA	19854806	19788463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
WTC11_00060479	chr22	-	6789	2	FSM	ENSG00000215012.9	ENST00000405640.1	6785	2	0	-4	0	-4	multi-exon	FALSE	canonical	3	66	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTTGGGGCTTGTGTT	-19851273	True	NA	-3	True	AATAAA	-20	NA	19854886	19846141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19852487_19854442
WTC11_00060480	chr22	-	6529	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	-10	4	-10	-4	multi-exon	FALSE	canonical	3	66	junction_1	57	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTTGGGGCTTGTGTT	-19851293	True	NA	-3	True	AATAAA	-20	NA	19854906	19846141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19852487_19854442_19854540_19854819
WTC11_00060483	chr22	-	1166	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	-37	0	-37	0	multi-exon	FALSE	canonical	3	63	junction_6	23.2999761564017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	19881406	19875521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
WTC11_00060484	chr22	-	1416	9	FSM	ENSG00000184470.21	ENST00000634537.1	1086	9	-326	-4	-326	0	multi-exon	FALSE	canonical	3	34	junction_1	37.7491721763537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTGCGGTGTCCCT	NA	False	NA	-1	True	AATAAA	-23	NA	19898367	19875517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038
WTC11_00060485	chr22	-	1942	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_13	29.1125961156877	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTGCCTGCGGTGTC	-19941251	True	NA	-4	True	AATAAA	-20	NA	19941818	19875520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
WTC11_00060486	chr22	-	3155	17	FSM	ENSG00000184470.21	ENST00000400519.6	3155	17	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_16	33.5283811680493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19941236	True	NA	-5	True	AATAAA	-19	NA	19941803	19875521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931096_19941700
WTC11_00060490	chr22	-	3977	19	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	0	17	combination_of_known_junctions	FALSE	canonical	3	34	junction_18	66.0521679348141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCTGGCACAAGTGG	-20015977	True	NA	-14	True	ATTAAA	-30	NA	20016745	19969878	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
WTC11_00060492	chr22	-	3639	17	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_14	44.4792349726252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-19985148	True	NA	-31	True	ATTAAA	-13	NA	19987190	19969895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
WTC11_00060493	chr22	-	3483	15	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	68.9758904936193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-19985166	True	NA	-31	True	ATTAAA	-13	NA	19987208	19969895	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971885_19971972_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
WTC11_00060494	chr22	-	4045	20	FSM	ENSG00000099889.14	ENST00000263207.8	4056	20	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_10	80.4940079668018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-20016044	True	NA	-31	True	ATTAAA	-13	NA	20016812	19969895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
WTC11_00060501	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_9	22.5406886458267	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-20115030	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
WTC11_00060502	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	36.3672433501481	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
WTC11_00060503	chr22	-	1040	4	FSM	ENSG00000099899.15	ENST00000487668.5	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	94.1924743396319	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGAATAAACAACTGCT	-20111602	False	NA	NA	False	NA	NA	NA	20113798	20112327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20113008_20113117_20113235_20113431_20113562_20113685
WTC11_00060504	chr22	-	2483	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	-10	0	0	multi-exon	FALSE	canonical	3	11	junction_4	62.4899330735535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGAATAAACAACTGCT	-20115026	True	NA	NA	False	NA	NA	NA	20117222	20112327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
WTC11_00060508	chr22	-	1846	10	ISM	ENSG00000099899.15	ENST00000404751.7	2498	12	42	814	0	0	5prime_fragment	FALSE	canonical	3	169	junction_7	23.5503138822101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTTTTGCTTAAG	-20115007	True	NA	NA	False	NA	NA	NA	20117203	20113117	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
WTC11_00060516	chr22	-	1946	2	FSM	ENSG00000040608.14	ENST00000043402.8	1944	2	0	-2	0	2	multi-exon	FALSE	canonical	3	111	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTCTCAGGCTAGGG	-20268307	False	NA	-4	True	AATAAA	-18	NA	20268318	20241412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20243111_20268070
WTC11_00060517	chr22	-	1622	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	-450	0	450	multi-exon	FALSE	canonical	3	644	junction_2	60.1227910197123	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCATGGGCCCTGCTGGG	-20309632	True	NA	NA	False	NA	NA	NA	20320060	20313787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
WTC11_00060518	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	325.111604769125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	-20309652	True	NA	NA	False	NA	NA	NA	20320080	20314393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
WTC11_00060519	chr22	-	631	1	FSM	ENSG00000273343.1	ENST00000608275.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	-20318738	False	NA	NA	False	NA	NA	NA	20318749	20318118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20318100_20318700
WTC11_00060520	chr22	-	1188	8	FSM	ENSG00000161133.17	ENST00000486536.6	1188	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	16.723440716185	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTACACAAAGGTGGAAAT	-20372670	True	NA	NA	False	AATGAA	-17	NA	20372696	20350577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20350932_20363624_20363675_20364185_20364318_20366566_20366735_20367547_20367644_20369428_20369576_20370119_20370200_20372535
WTC11_00060521	chr22	-	3463	11	FSM	ENSG00000244486.9	ENST00000622235.5	3463	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	15.9527427108946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATCACTTCCTGTT	-20436313	True	NA	-1	True	AATAAA	-16	NA	20437825	20424583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20426283_20427397_20427551_20429224_20429341_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
WTC11_00060522	chr22	-	3564	11	FSM	ENSG00000244486.9	ENST00000623402.1	3248	11	-85	-231	-85	0	multi-exon	FALSE	canonical	3	35	junction_3	19.5386795869117	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATCACTTCCTGTT	-20436399	True	NA	-1	True	AATAAA	-16	NA	20437911	20424583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20426283_20427397_20427551_20429224_20429356_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
WTC11_00060523	chr22	-	2530	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	-2	0	2	multi-exon	FALSE	canonical	3	6	junction_6	9.24962461700774	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGCCACAGCCTCAGT	-20494984	True	NA	-5	True	AATAAA	-29	NA	20495795	20441516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
WTC11_00060524	chr22	-	1165	1	FSM	ENSG00000236670.1	ENST00000436075.1	1291	1	129	-3	129	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAAGCAGGGTATCCTT	NA	False	NA	NA	False	NA	NA	NA	20483976	20482811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20482800_20484000
WTC11_00060525	chr22	-	406	1	Genic_Genomic	ENSG00000229107.2	novel	NA	NA	NA	NA	2764	21	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCCCAACCGGCCGGAC	NA	False	NA	NA	False	NA	NA	NA	20668220	20667814	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_-_20667800_20668200
WTC11_00060527	chr22	-	6751	55	FSM	ENSG00000241973.11	ENST00000255882.11	6751	55	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_31	46.3467613842578	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	-20857345	True	NA	1	True	AATAAA	-26	NA	20858811	20707690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394_20734554_20742227_20742356_20742607_20742765_20744627_20744721_20747582_20747703_20749904_20749995_20751292_20751377_20751673_20751756_20752902_20753028_20753109_20753181_20761303_20761387_20764816_20764951_20765099_20765237_20765584_20765694_20793192_20793244_20796145_20796315_20798583_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
WTC11_00060534	chr22	-	1907	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	50	0	-50	multi-exon	FALSE	canonical	3	228	junction_2	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCAGTTCTCAAACAG	-21000256	False	1486	NA	False	NA	NA	NA	21001742	20999153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255
WTC11_00060535	chr22	-	1863	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	50	0	-50	multi-exon	TRUE	canonical	3	157	junction_3	46.2673390921357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCAGTTCTCAAACAG	-21000632	True	NA	NA	False	NA	NA	NA	21002118	20999153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
WTC11_00060536	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000309	False	1486	-27	True	AATAAA	-17	NA	21001795	20999772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646
WTC11_00060537	chr22	-	1148	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	-4	0	0	multi-exon	FALSE	canonical	3	110	junction_4	61.5832769508087	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	NA	False	NA	-27	True	AATAAA	-17	NA	21002196	20999772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
WTC11_00060541	chr22	-	2284	5	FSM	ENSG00000099960.13	ENST00000382932.3	2316	5	22	10	10	-10	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTATCCACTGTGG	-21032515	False	NA	-12	True	NA	NA	NA	21032539	21028727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21029231_21029335_21029445_21029710_21030352_21030830_21031853_21032530
WTC11_00060542	chr22	-	1174	1	FSM	ENSG00000224688.1	ENST00000420708.1	748	1	-124	-302	-124	302	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTCTTTGTGGACT	NA	False	NA	NA	False	NA	NA	NA	21142495	21141321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21141300_21142500
WTC11_00060543	chr22	-	3212	9	FSM	ENSG00000183506.17	ENST00000486209.5	3213	9	0	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_8	72.0117177964809	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTGAGGTTTTGTGT	-21484122	False	NA	NA	False	AATAAA	-23	NA	21484134	21473000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210_21476765_21477789_21477916_21477996_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004
WTC11_00060544	chr22	-	2425	3	FSM	ENSG00000183506.17	ENST00000470274.5	2414	3	0	-11	0	2	multi-exon	FALSE	canonical	3	113	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21477143	21472997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210
WTC11_00060545	chr22	-	1798	4	FSM	ENSG00000183506.17	ENST00000477296.5	1787	4	0	-11	0	2	multi-exon	FALSE	canonical	3	61	junction_3	64.8553947040816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21477217	21472997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001
WTC11_00060546	chr22	-	2366	18	NNC	ENSG00000183506.17	novel	2294	17	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	65.321033138203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTGGAATCTGTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	21517478	21473009	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488411_21491993_21492095_21517324
WTC11_00060547	chr22	-	2831	15	FSM	ENSG00000183506.17	ENST00000462560.6	2553	15	-278	0	-278	0	multi-exon	FALSE	canonical	3	50	junction_10	64.007214197993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAAATAGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-1	NA	21488660	21473022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223
WTC11_00060550	chr22	-	2334	18	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	18	2	combination_of_known_junctions	FALSE	canonical	3	50	junction_11	62.2136068072919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21517463	21472997	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
WTC11_00060554	chr22	-	946	3	NIC	ENSG00000161179.14	novel	1309	5	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	31	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626843	True	NA	-4	True	AATAAA	-20	NA	21629997	21628088	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21628788_21629307_21629408_21629850
WTC11_00060555	chr22	-	1580	3	ISM	ENSG00000161179.14	ENST00000292778.11	1309	5	12	0	2	0	intron_retention	FALSE	canonical	3	298	junction_1	18	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626856	True	NA	-4	True	AATAAA	-20	NA	21630010	21628088	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_21628788_21629009_21629188_21629307
WTC11_00060556	chr22	-	1614	3	FSM	ENSG00000161179.14	ENST00000464015.5	1613	3	0	-1	0	1	multi-exon	TRUE	canonical	3	298	junction_1	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626858	True	NA	-3	True	AATAAA	-21	NA	21630012	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629762_21629850
WTC11_00060557	chr22	-	1310	5	FSM	ENSG00000161179.14	ENST00000292778.11	1309	5	0	-1	0	1	multi-exon	FALSE	canonical	3	165	junction_3	68.8344935334023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626868	True	NA	-3	True	AATAAA	-21	NA	21630022	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601_21629762_21629850
WTC11_00060558	chr22	-	1424	2	FSM	ENSG00000161179.14	ENST00000468686.5	1423	2	0	-1	0	1	multi-exon	FALSE	canonical	3	79	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626877	True	NA	-3	True	AATAAA	-21	NA	21630031	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629307
WTC11_00060559	chr22	-	1411	5	FSM	ENSG00000161179.14	ENST00000415762.6	1410	5	0	-1	0	1	multi-exon	FALSE	canonical	3	147	junction_3	76.4832498002013	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626910	True	NA	-3	True	AATAAA	-21	NA	21630064	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629542_21629762_21629850
WTC11_00060562	chr22	-	1386	4	ISM	ENSG00000161179.14	ENST00000292778.11	1309	5	13	-1	3	1	intron_retention	FALSE	canonical	3	165	junction_3	72.6834842924367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626855	True	NA	-3	True	AATAAA	-21	NA	21630009	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601
WTC11_00060564	chr22	-	4297	5	FSM	ENSG00000100027.17	ENST00000339468.8	4297	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	15.5623744974859	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCCCTCAGTGGACGAG	-21735215	True	NA	-4	True	AATAAA	-24	NA	21735794	21697535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627_21710909_21735614
WTC11_00060565	chr22	-	5878	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	3	0	-3	multi-exon	FALSE	canonical	3	348	junction_1	51.5835184433943	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGCTTTATTTCACT	-21854546	True	NA	-8	True	AGTAAA	-15	NA	21867645	21759659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
WTC11_00060567	chr22	-	1482	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	14	-9	14	9	multi-exon	FALSE	canonical	3	391	junction_3	36.1205464735934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCTAGGAATCTCTCT	-21854567	True	NA	0	True	ATTAAA	-23	NA	21867666	21769030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
WTC11_00060568	chr22	-	5163	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	-14	0	14	multi-exon	FALSE	canonical	3	109	junction_1	9.07114735222145	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTTCCTGACTT	-21950535	True	NA	2	True	AATAAA	-29	NA	21952848	21919410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
WTC11_00060571	chr22	-	3113	18	FSM	ENSG00000100038.20	ENST00000398793.6	3107	18	0	-6	0	0	multi-exon	TRUE	canonical	3	13	junction_17	54.8106523629919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977804	True	NA	NA	False	ATTAAA	-22	NA	21982750	21957024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982413
WTC11_00060572	chr22	-	2936	19	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_18	41.8417064071451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977861	True	NA	NA	False	ATTAAA	-22	NA	21982807	21957024	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
WTC11_00060573	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_13	41.3565808790683	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977841	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
WTC11_00060575	chr22	-	4169	17	FSM	ENSG00000100038.20	ENST00000444502.5	4163	17	0	-6	0	0	multi-exon	FALSE	canonical	3	95	junction_16	44.0055039171238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977844	True	NA	NA	False	ATTAAA	-22	NA	21982790	21957024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21958694_21959131_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
WTC11_00060576	chr22	-	2932	8	NNC	ENSG00000100038.20	novel	3107	18	NA	NA	2271	0	intron_retention	FALSE	canonical	2	14	junction_4	89.8692928419845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21965365	False	NA	NA	False	ATTAAA	-16	NA	21965379	21957030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_21957596_21958182_21958694_21959131_21959737_21960320_21960450_21962127_21962894_21963922_21964029_21964160_21964316_21965284
WTC11_00060584	chr22	-	946	2	FSM	ENSG00000263366.2	ENST00000580133.2	923	2	0	-23	0	23	multi-exon	FALSE	canonical	3	93	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAATAAGGCGGTCCCC	NA	False	NA	NA	False	NA	NA	NA	22118005	22114820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22115246_22117484
WTC11_00060585	chr22	-	1430	1	FSM	ENSG00000228050.1	ENST00000420768.1	1380	1	53	-103	53	103	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGCAGCGATGTCAG	NA	False	NA	NA	False	ATTAAA	-35	NA	22224513	22223083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22223100_22224500
WTC11_00060586	chr22	-	3448	1	FSM	ENSG00000274422.1	ENST00000610778.1	3293	1	-41	-114	-41	114	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTTGACTGTCTCCT	NA	False	NA	NA	False	TTTAAA	-4	NA	22287261	22283813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22283800_22287300
WTC11_00060587	chr22	-	850	3	Antisense	novelGene_ENSG00000234630.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTGGCCCTGTACTGC	-22297845	True	NA	NA	False	NA	NA	NA	22298074	22294644	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_22294931_22295794_22295966_22297681
WTC11_00060588	chr22	-	3035	2	NNC	ENSG00000275004.4	novel	3714	2	NA	NA	2033	8309	intron_retention	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAGGAGAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	22487435	22476111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_22476137_22484425
WTC11_00060589	chr22	-	3043	2	NNC	ENSG00000275004.4	novel	5309	4	NA	NA	2033	4716	intron_retention	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGGCATGGTGGCCTG	NA	False	NA	NA	False	ACTAAA	-29	NA	22487435	22479704	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_22479733_22484420
WTC11_00060590	chr22	-	5353	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	-44	0	-44	0	multi-exon	FALSE	canonical	3	48	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	-22506905	True	NA	NA	False	AATAAA	-18	NA	22508786	22484420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
WTC11_00060592	chr22	-	2150	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	-2	0	2	multi-exon	FALSE	canonical	3	4	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTTGGCTTTTTA	NA	False	NA	5	True	AATAAA	-17	NA	22520270	22513733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22515702_22520088
WTC11_00060594	chr22	-	2053	10	FSM	ENSG00000228315.12	ENST00000422506.5	2055	10	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	17.6138273404802	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCTCCCTCTCTTCA	-23714351	True	NA	-2	True	AATAAA	-18	NA	23717356	23638488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23695172_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
WTC11_00060596	chr22	-	4798	3	FSM	ENSG00000272578.5	ENST00000417194.5	5004	3	0	206	0	-206	multi-exon	FALSE	canonical	3	16	junction_2	19	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAATCCCGTCTCTACT	NA	False	NA	NA	False	NA	NA	NA	23693185	23658299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23660001_23683724_23683868_23690231
WTC11_00060597	chr22	-	6944	2	FSM	ENSG00000187792.5	ENST00000341976.5	6940	2	0	-4	0	4	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATAGTGATATATTG	-23751053	False	NA	-2	True	AATAAA	-25	NA	23751112	23738677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23745220_23750710
WTC11_00060598	chr22	-	569	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	-2	0	2	multi-exon	FALSE	canonical	2	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGAGGGTCATAAGAT	-23754366	True	NA	-15	True	NA	NA	NA	23754425	23752740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23753199_23754314
WTC11_00060599	chr22	-	384	3	FSM	ENSG00000250479.9	ENST00000520222.1	384	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23744922	True	NA	-3	True	ATTAAA	-19	NA	23767876	23765833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766276_23767833
WTC11_00060600	chr22	-	691	4	FSM	ENSG00000250479.9	ENST00000401675.7	691	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	403.833574081645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23744988	True	NA	-3	True	ATTAAA	-19	NA	23767942	23765833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766297_23767373_23767594_23767833
WTC11_00060601	chr22	-	700	4	FSM	ENSG00000250479.9	ENST00000484558.3	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_2	95.0590459778669	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23745018	True	NA	-3	True	ATTAAA	-19	NA	23767972	23765833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766276_23767373_23767594_23767833
WTC11_00060603	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	35.758448885077	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
WTC11_00060606	chr22	-	1033	6	NIC	ENSG00000099958.15	novel	969	6	NA	NA	19	0	intron_retention	FALSE	canonical	1	1	junction_2	51.8328081431057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23838481	True	NA	-15	True	AATAAA	-15	NA	23838985	23836733	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_23837155_23837658_23837732_23838137_23838446_23838563_23838638_23838710_23838777_23838894
WTC11_00060609	chr22	-	322	1	FSM	ENSG00000272973.1	ENST00000609825.1	613	1	266	25	266	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAATAAACTTTCTAATG	NA	False	NA	NA	False	NA	NA	NA	23856773	23856451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23856500_23856800
WTC11_00060610	chr22	-	1115	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	-7	0	7	multi-exon	FALSE	canonical	3	30	junction_3	14.7732867026942	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTTTTACTACATTG	NA	False	NA	NA	False	AATAAA	-33	NA	23961195	23957406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
WTC11_00060612	chr22	-	570	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	-5	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	41	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTTCTATTATCT	NA	False	NA	-1	True	AATAAA	-29	NA	23974441	23971364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23971624_23973767_23973944_23974306
WTC11_00060613	chr22	-	592	3	FSM	ENSG00000099977.15	ENST00000403754.7	569	3	0	-23	0	0	multi-exon	FALSE	canonical	2	8	junction_1	531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCTAGGAGGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	23974459	23973080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23973344_23973767_23973944_23974306
WTC11_00060614	chr22	-	1048	2	FSM	ENSG00000099977.15	ENST00000444947.2	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCTAGGAGGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	23974491	23973080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23973944_23974306
WTC11_00060615	chr22	-	316	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTCTCCAGGGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	24259522	24259206	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_-_24259200_24259500
WTC11_00060616	chr22	-	3443	6	FSM	ENSG00000138867.17	ENST00000435822.6	3435	6	0	-8	0	-7	multi-exon	FALSE	canonical	3	155	junction_1	17.2904597972408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGGCTGGCCTTTATG	-24553104	True	NA	-17	True	AATAAA	-28	NA	24555138	24540429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
WTC11_00060617	chr22	-	3482	6	FSM	ENSG00000138867.17	ENST00000407471.7	3482	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	69.2109817875747	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-24553148	True	NA	-25	True	AATAAA	-20	NA	24555182	24540437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24543101_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
WTC11_00060623	chr22	-	1828	5	FSM	ENSG00000178026.13	ENST00000446942.5	1828	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	46.2513513316098	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	-24591739	True	NA	-2	True	AATAAA	-29	NA	24593066	24585619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24588330_24588678_24589266_24589820_24589950_24592862
WTC11_00060625	chr22	-	1248	4	FSM	ENSG00000178026.13	ENST00000318753.13	1233	4	0	-15	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.5558151602468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	-24591746	True	NA	-2	True	AATAAA	-29	NA	24593073	24585619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592862
WTC11_00060626	chr22	-	2958	4	FSM	ENSG00000178026.13	ENST00000491910.5	2943	4	0	-15	0	0	multi-exon	FALSE	canonical	3	18	junction_2	40.3347107202827	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	-24591746	True	NA	-2	True	AATAAA	-29	NA	24593073	24585619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24589394_24589820_24589950_24592216
WTC11_00060627	chr22	-	2516	5	NIC	ENSG00000178026.13	novel	1417	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	51.2079095453036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCGCAATAAAGAGTGA	-24591707	True	NA	-44	True	NA	NA	NA	24593034	24585661	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24586412_24588213_24588330_24588678_24589950_24592216_24592424_24592862
WTC11_00060631	chr22	-	224	1	ISM	ENSG00000284070.1	ENST00000639904.1	4634	4	199	6064	199	-6064	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAATCCAGTCACGTTCC	NA	False	NA	NA	False	NA	NA	NA	24651458	24651234	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_24651200_24651500
WTC11_00060632	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-24695443	True	NA	1	True	AATAAA	-22	NA	24696003	24691121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24691562_24695846
WTC11_00060633	chr22	-	5388	1	FSM	ENSG00000279085.1	ENST00000623888.1	5388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATCCGGGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	25015072	25009684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_25009700_25015100
WTC11_00060634	chr22	-	780	1	FSM	ENSG00000231466.2	ENST00000434827.1	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGACTGTTATCACCC	NA	False	NA	NA	False	NA	NA	NA	25350322	25349542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_25349500_25350300
WTC11_00060635	chr22	-	1912	8	NNC	ENSG00000128294.16	novel	5653	7	NA	NA	0	72672	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.536778990475	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGGAGTGACTGGAGC	-26586096	True	NA	NA	False	NA	NA	NA	26590125	26449323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_26449349_26525754_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
WTC11_00060636	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_13	29.3350367086565	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	-26481806	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
WTC11_00060637	chr22	-	3492	13	FSM	ENSG00000100099.21	ENST00000429411.5	3492	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	51.3016000400247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26477471	False	NA	-20	True	AATAAA	-36	NA	26479448	26452082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466050_26466105_26466225_26466263_26468550_26468624_26470718_26470923_26472301_26472419_26472831_26472940_26476992_26477137_26479264
WTC11_00060639	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	27.9460596242245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481818	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
WTC11_00060640	chr22	-	6130	13	FSM	ENSG00000100099.21	ENST00000466781.5	6136	13	6	0	-3	0	multi-exon	FALSE	canonical	3	30	junction_12	39.7782045290578	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481854	True	NA	-20	True	AATAAA	-36	NA	26483831	26452082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
WTC11_00060641	chr22	-	3936	14	FSM	ENSG00000100099.21	ENST00000439453.5	3936	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	42.6224653934169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481859	True	NA	-20	True	AATAAA	-36	NA	26483836	26452082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470923_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
WTC11_00060644	chr22	-	732	3	FSM	ENSG00000100099.21	ENST00000483631.1	737	3	5	0	-3	0	multi-exon	FALSE	canonical	3	9	junction_1	39	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAATGGCAGAATCAG	-26481854	True	NA	NA	False	CATAAA	-25	NA	26483831	26476990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26477137_26481721_26482241_26483764
WTC11_00060647	chr22	-	3554	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	-15	0	0	multi-exon	TRUE	canonical	3	141	junction_10	21.0940556478234	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGCTTTCTGGAACAC	-26507798	True	NA	NA	False	AATAAA	-36	NA	26512473	26491224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
WTC11_00060648	chr22	-	2972	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	2	0	2	0	multi-exon	FALSE	canonical	3	141	junction_10	21.4351919893735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	-26507700	True	NA	0	True	AATAAA	-26	NA	26512375	26491926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
WTC11_00060649	chr22	-	923	2	FSM	ENSG00000100109.17	ENST00000492137.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	NA	False	NA	0	True	AATAAA	-26	NA	26494619	26491926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138
WTC11_00060650	chr22	-	2882	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	14	0	4	0	multi-exon	FALSE	canonical	3	12	junction_14	59.5201553164043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-26507810	True	NA	-59	True	NA	NA	NA	26512485	26491985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
WTC11_00060655	chr22	-	5790	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	7	-144	0	144	multi-exon	FALSE	canonical	3	389	junction_6	34.5273643490042	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATCAGGGCCTCCAAAG	-26586096	True	NA	NA	False	AATATA	-37	NA	26590125	26521851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
WTC11_00060656	chr22	-	544	4	FSM	ENSG00000128294.16	ENST00000450022.1	544	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	178.753710140206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAGGAGCTGGTGAT	-26586096	True	NA	NA	False	NA	NA	NA	26590125	26541489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26541719_26543107_26543278_26544603_26544676_26590052
WTC11_00060657	chr22	-	694	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	21	-68	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	14.3527000944073	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGATGTGACTTCCTC	-26608279	False	NA	45	True	NA	NA	NA	26608308	26599345	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
WTC11_00060658	chr22	-	1080	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	1156	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	13.4966662550424	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTTTCTGCCTGTTA	-26616825	True	NA	-7	True	AATAAA	-16	NA	26616871	26599283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
WTC11_00060659	chr22	-	736	1	FSM	ENSG00000226912.1	ENST00000425548.1	448	1	20	-308	20	308	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCCTTAAGAGCTGC	-26645305	False	NA	NA	False	NA	NA	NA	26645316	26644580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26644600_26645300
WTC11_00060660	chr22	-	355	1	ISM	ENSG00000231369.1	ENST00000422915.1	578	2	253	32	253	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGCAATACTCTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	26887295	26886940	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_26886900_26887300
WTC11_00060661	chr22	-	1215	3	Antisense	novelGene_ENSG00000226169.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	50	junction_1	132	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAACCAATTGTTCTT	-27745131	False	NA	-13	True	ATTAAA	-42	NA	27745143	27675734	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_27676208_27744370_27744925_27744955
WTC11_00060662	chr22	-	7815	2	FSM	ENSG00000169184.6	ENST00000302326.5	7814	2	7	-8	7	8	multi-exon	FALSE	canonical	3	31	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTGGGTGGGGCTCGC	-27801063	True	NA	-1	True	AATAAA	-26	NA	27801749	27748268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27751097_27796762
WTC11_00060664	chr22	-	2897	13	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	0	80450	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	293.590547739913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGGAAAAAACCCCACCA	-27902318	True	NA	NA	False	AAAAAG	-1	NA	27919214	27771218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_27771246_27851670_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
WTC11_00060665	chr22	-	2893	13	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	0	80450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	293.590547739913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGGAAAAAACCCCACCA	-27902318	True	NA	NA	False	AAAAAG	-1	NA	27919214	27771218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_27771245_27851673_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
WTC11_00060666	chr22	-	2902	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	252.376800809379	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-27902348	True	NA	-1	True	AATAAA	-19	NA	27919244	27851668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
WTC11_00060673	chr22	-	11775	23	FSM	ENSG00000100154.15	ENST00000397906.7	11770	23	-5	0	-5	0	multi-exon	TRUE	canonical	3	14	junction_20	6.703428258229	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTATCTGGATCACTT	-28679198	True	NA	0	True	ATTAAA	-23	NA	28679845	27978013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27983852_27985248_27985357_27989877_27990008_27990788_27990813_27992586_27992664_27993286_27993519_27996134_27996260_27998539_27999261_28001373_28001554_28014247_28014393_28030225_28030367_28094079_28094246_28096189_28096409_28098914_28099045_28101170_28101281_28105278_28105803_28107061_28108404_28163091_28163600_28296197_28296329_28297579_28297853_28306495_28306644_28629551_28629831_28679621
WTC11_00060678	chr22	-	1519	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	-9	0	9	multi-exon	TRUE	canonical	3	61	junction_13	255.063050564588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTGATAATCGGTTC	-28729563	True	NA	-9	True	ATTAAA	-27	NA	28741811	28687733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
WTC11_00060679	chr22	-	1853	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	-9	0	9	multi-exon	FALSE	canonical	3	639	junction_7	151.032500894776	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTGATAATCGGTTC	-28729572	True	NA	-9	True	ATTAAA	-27	NA	28741820	28687733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
WTC11_00060680	chr22	-	1780	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	-9	0	9	multi-exon	FALSE	canonical	3	55	junction_5	258.892269294762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTGATAATCGGTTC	-28729586	True	NA	-9	True	ATTAAA	-27	NA	28741834	28687733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
WTC11_00060681	chr22	-	1926	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	0	-3	0	0	multi-exon	FALSE	canonical	2	5	junction_14	315.664477289134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-28729558	True	NA	-38	True	NA	NA	NA	28741806	28687762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
WTC11_00060687	chr22	-	1852	6	NNC	ENSG00000100219.17	novel	1131	6	NA	NA	0	13232	intron_retention	FALSE	non_canonical	0	0	junction_1	714.933115752795	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACGAATACACTTTGA	-28768899	True	NA	NA	False	AAAACA	-12	NA	28800558	28781322	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_28781369_28794559_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
WTC11_00060688	chr22	-	1826	5	FSM	ENSG00000100219.17	ENST00000403532.7	1824	5	0	-2	0	0	multi-exon	FALSE	canonical	3	24	junction_3	765.44607092858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-28768899	True	NA	-4	True	ATTAAA	-18	NA	28800558	28794554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799041_28799154_28800297
WTC11_00060689	chr22	-	2770	5	FSM	ENSG00000100219.17	ENST00000216037.10	1850	5	39	-959	0	959	multi-exon	FALSE	canonical	3	1709	junction_1	52.3187346941801	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACCTCTTCAAGAAAAAA	-28768899	True	NA	NA	False	AATAAA	-25	NA	28800558	28793595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
WTC11_00060690	chr22	-	2803	6	FSM	ENSG00000100219.17	ENST00000344347.5	1131	6	-73	-1599	0	979	multi-exon	TRUE	non_canonical	2	96	junction_2	676.620129762631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAGTGATATTAATACAA	-28768938	True	NA	NA	False	AATAAA	-45	NA	28800597	28793575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796122_28796147_28796193_28797076_28797206_28799056_28799154_28800297
WTC11_00060691	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	766.428894288309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	-28768474	False	NA	-38	True	TTTAAA	-2	NA	28800133	28794588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
WTC11_00060693	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	83.9576612876329	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260747	True	NA	-22	True	AATAAA	-19	NA	29267981	29259871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
WTC11_00060694	chr22	-	3012	6	NIC	ENSG00000100263.14	novel	1777	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	316	junction_3	42.3320209770335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260722	True	NA	-22	True	AATAAA	-19	NA	29267956	29259871	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29265669_29267425_29267578_29267747
WTC11_00060695	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	196.370398312305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-29260711	True	NA	-54	True	NA	NA	NA	29267945	29259903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
WTC11_00060696	chr22	-	849	3	FSM	ENSG00000100263.14	ENST00000496342.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	169.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGCAGGCCTGGACTG	-29264388	False	NA	NA	False	NA	NA	NA	29264401	29260498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260614_29260701_29260869_29263834
WTC11_00060697	chr22	-	900	5	FSM	ENSG00000100263.14	ENST00000414672.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	148.535138940252	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGGAGGGCGTCTTGTG	-29268063	True	NA	NA	False	NA	NA	NA	29268209	29260811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29268088
WTC11_00060700	chr22	-	1431	3	FSM	ENSG00000100276.10	ENST00000216101.7	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCTGGGATTTCTGGG	-29315592	True	NA	1	True	AATAAA	-17	NA	29315697	29312932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29313569_29313862_29313988_29315027
WTC11_00060701	chr22	-	3560	4	FSM	ENSG00000100280.17	ENST00000482818.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	22.5437845585479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-29332059	False	NA	-1	True	AATAAA	-15	NA	29332321	29327679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29330533_29330622_29330710_29331448_29331534_29331786
WTC11_00060702	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_9	33.8116474014503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	-29381396	True	NA	-3	True	AATAAA	-13	NA	29388583	29327681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
WTC11_00060703	chr22	-	3903	21	FSM	ENSG00000100280.17	ENST00000317368.11	3903	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	91.1851276250683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCAATCACGGACACT	-29381396	True	NA	-15	True	AATAAA	-13	NA	29388583	29327864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334351_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
WTC11_00060704	chr22	-	1840	13	FSM	ENSG00000100280.17	ENST00000421126.5	1908	13	68	0	68	0	multi-exon	FALSE	canonical	1	1	junction_12	111.619019685516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTTTGTGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	29370591	29341562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29370512
WTC11_00060706	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-29548095	True	NA	NA	False	NA	NA	NA	29553757	29505878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
WTC11_00060707	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
WTC11_00060708	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	62.3869176991459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
WTC11_00060710	chr22	-	1992	11	NNC	ENSG00000184117.12	novel	2013	10	NA	NA	0	40492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.784981552086	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGTCATTCTACAAC	-29565276	False	NA	NA	False	NA	NA	NA	29581074	29514315	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29514335_29554808_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
WTC11_00060715	chr22	-	2127	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	-114	0	114	multi-exon	FALSE	canonical	3	1906	junction_4	181.135921954267	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGCTATTCTCAACAG	-29565315	True	NA	NA	False	NA	NA	NA	29581113	29554693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
WTC11_00060717	chr22	-	952	8	FSM	ENSG00000184117.12	ENST00000415100.5	661	8	0	-291	0	-71	multi-exon	FALSE	canonical	3	16	junction_6	1061.18260945619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGCACCAGCCCTGGC	-29565276	False	NA	NA	False	NA	NA	NA	29581074	29560878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580098_29580156_29580984
WTC11_00060719	chr22	-	846	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_5	49.5314041795708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGCTGTGTTTCCCT	-29765691	True	NA	-22	True	TATAAA	-19	NA	29766984	29730954	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
WTC11_00060720	chr22	-	951	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	-6	0	6	multi-exon	FALSE	canonical	3	70	junction_5	41.5567082430743	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTTTCCCTACACT	-29765714	True	NA	-17	True	TATAAA	-24	NA	29767007	29730949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
WTC11_00060722	chr22	-	2793	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	-3	0	1	multi-exon	FALSE	canonical	3	146	junction_19	51.9259540994797	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATGTCCATGACCC	-29835457	True	NA	-15	True	AATAAA	-22	NA	29838274	29788607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
WTC11_00060724	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_19	70.0969863831534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-29835459	True	NA	-49	True	AAAAAG	-1	NA	29838276	29788641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
WTC11_00060732	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.6633634219397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-30288357	True	NA	-2	True	AATAAA	-16	NA	30289505	30285116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
WTC11_00060733	chr22	-	1460	8	FSM	ENSG00000239282.8	ENST00000404953.7	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	38.1677286487431	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTTAATAAAGGACTT	-30288459	True	NA	-31	True	NA	NA	NA	30289607	30285145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
WTC11_00060736	chr22	-	1970	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	2	0	-1	multi-exon	FALSE	canonical	3	65	junction_1	9.49670995661129	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCGTGTACAGCTAGGG	-30326279	True	NA	-1	True	AATAAA	-15	NA	30326941	30291991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
WTC11_00060738	chr22	-	5106	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	3	-19	0	19	multi-exon	FALSE	canonical	3	424	junction_4	123.277464823598	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGATATGGAGATTTGC	-30342971	True	NA	6	True	AATAAA	-40	NA	30356891	30331968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
WTC11_00060739	chr22	-	1651	8	FSM	ENSG00000099999.15	ENST00000215798.10	1651	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.63017222049845	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCGGCTTTGTG	-30386422	False	703	NA	False	NA	NA	NA	30387125	30378982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
WTC11_00060740	chr22	-	788	4	ISM	ENSG00000214491.9	ENST00000691669.1	3295	8	4841	1836	3478	-921	3prime_fragment	FALSE	canonical	2	6	junction_2	4.24264068711928	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTTTGGGAAGCCAAG	NA	False	NA	NA	False	AATATA	-38	NA	30529163	30524645	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_30525110_30525610_30525751_30525825_30525933_30529086
WTC11_00060741	chr22	-	1688	3	FSM	ENSG00000128242.13	ENST00000402321.5	1908	3	229	-9	-3	9	multi-exon	FALSE	canonical	3	13	junction_2	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGACTTGGGGTGG	-30564545	False	359	7	True	AGTAAA	-36	NA	30564904	30554625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30564824
WTC11_00060742	chr22	-	1721	3	FSM	ENSG00000128242.13	ENST00000402369.5	1712	3	0	-9	0	9	multi-exon	FALSE	canonical	3	49	junction_2	20.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGACTTGGGGTGG	-30574219	True	NA	7	True	AGTAAA	-36	NA	30574578	30554625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30574465
WTC11_00060743	chr22	-	1918	4	FSM	ENSG00000128242.13	ENST00000406361.6	1909	4	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_2	37.7094152699296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGACTTGGGGTGG	-30574306	True	NA	7	True	AGTAAA	-36	NA	30574665	30554625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30574465
WTC11_00060747	chr22	-	1004	4	FSM	ENSG00000100029.18	ENST00000441668.5	999	4	0	-5	0	0	multi-exon	FALSE	canonical	3	104	junction_2	333.56092230489	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	-30579828	True	NA	-1	True	ATTAAA	-26	NA	30579923	30576624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578996_30579136_30579304_30579750
WTC11_00060748	chr22	-	1743	2	FSM	ENSG00000100029.18	ENST00000488719.1	1732	2	0	-11	0	0	multi-exon	FALSE	canonical	3	818	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	-30580019	False	NA	-1	True	ATTAAA	-26	NA	30580074	30576624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836
WTC11_00060749	chr22	-	2265	15	FSM	ENSG00000100029.18	ENST00000354694.12	2265	15	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_8	75.0095232049143	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	-30581706	True	NA	-1	True	ATTAAA	-26	NA	30591910	30576624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
WTC11_00060750	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	204.106564803581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	-30581676	True	NA	-41	True	NA	NA	NA	30591880	30576664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
WTC11_00060751	chr22	-	2239	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	-52	-199	0	0	multi-exon	FALSE	canonical	3	88	junction_6	185.754226474288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATTGCATTTTGTGTC	-30581706	True	NA	-12	True	ATTAAA	-15	NA	30591910	30576635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
WTC11_00060754	chr22	-	720	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	-7	0	7	multi-exon	FALSE	canonical	3	824	junction_1	12.0277457017791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGAAGGCACGACGGGT	-30581686	True	NA	NA	False	NA	NA	NA	30591890	30586990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
WTC11_00060755	chr22	-	4840	3	FSM	ENSG00000167065.14	ENST00000342474.4	1157	3	57	-3740	15	1670	multi-exon	FALSE	canonical	2	5	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACATCTGCAGTCTC	-30667536	True	NA	NA	False	AATAAA	-17	NA	30667828	30659774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30664081_30664954_30665122_30667461
WTC11_00060756	chr22	-	4673	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	47	-1670	15	1670	multi-exon	FALSE	canonical	2	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACATCTGCAGTCTC	-30667536	True	NA	NA	False	AATAAA	-17	NA	30667828	30659774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30664081_30667461
WTC11_00060757	chr22	-	4676	27	NNC	ENSG00000133422.14	novel	5657	26	NA	NA	-267	14054	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	70.7023931869839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACATATGTGGGATC	-30959006	True	NA	NA	False	CATAAA	-25	NA	30969041	30911075	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_30911432_30926724_30926872_30928027_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
WTC11_00060758	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	24.6253203024854	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	-30968753	False	57	0	True	TATAAA	-24	NA	30968774	30925129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
WTC11_00060759	chr22	-	766	5	FSM	ENSG00000133422.14	ENST00000445980.5	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	106.504401317504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	-30932881	False	NA	-15	True	TATAAA	-20	NA	30932894	30926610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928027_30928208_30932358_30932453_30932544_30932770_30932888
WTC11_00060760	chr22	-	4460	26	NIC	ENSG00000133422.14	novel	5657	26	NA	NA	-293	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	48.3371492746521	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	-30959032	True	NA	-15	True	TATAAA	-20	NA	30969067	30926610	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_30926872_30928027_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
WTC11_00060762	chr22	-	4108	15	FSM	ENSG00000133422.14	ENST00000676215.1	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	27.650146694817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAATATTTATTTTTTA	-30940808	False	NA	-41	True	NA	NA	NA	30940837	30926636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30940042_30940757
WTC11_00060765	chr22	-	1825	1	FSM	ENSG00000273387.1	ENST00000609017.1	1410	1	-416	1	-416	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCCTGTTGATTCATCT	-31083941	False	NA	NA	False	NA	NA	NA	31083981	31082156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31082200_31084000
WTC11_00060766	chr22	-	686	4	FSM	ENSG00000198832.11	ENST00000490967.5	2070	4	1387	-3	-382	-2	multi-exon	FALSE	canonical	3	278	junction_1	10.3708994574027	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGACTCCTTCGTTGC	-31102884	False	NA	-2	True	ACTAAA	-20	NA	31106146	31104773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929
WTC11_00060767	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	10.917302780449	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-31104306	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
WTC11_00060768	chr22	-	685	2	FSM	ENSG00000198832.11	ENST00000495533.1	673	2	0	-12	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-31102502	False	NA	NA	False	NA	NA	NA	31105764	31105000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207
WTC11_00060769	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	115.243221058768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-31104291	True	NA	NA	False	NA	NA	NA	31107553	31105000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
WTC11_00060770	chr22	-	2594	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	12	-6	12	6	multi-exon	TRUE	canonical	3	47	junction_5	11.1567119807864	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCTGGTAAATGTCGG	-31139177	True	NA	-1	True	ATTAAA	-28	NA	31140496	31134800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
WTC11_00060771	chr22	-	2413	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	24.3195394693238	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139137	True	NA	-7	True	ATTAAA	-22	NA	31140456	31134806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
WTC11_00060772	chr22	-	2427	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	-7	0	1	multi-exon	FALSE	canonical	2	5	junction_2	3.24961536185438	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCAAGTTTTTGAGGG	-31292364	True	NA	90	True	ATTAAA	-18	NA	31292488	31281592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
WTC11_00060773	chr22	-	3910	5	FSM	ENSG00000100105.18	ENST00000266269.10	3895	5	0	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_1	170.426670448026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTCAGCTGTGGGG	-31346302	False	885	13	True	ATTAAA	-36	NA	31346346	31325788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31328786_31328925_31335691_31335864_31342896_31342961_31344331
WTC11_00060774	chr22	-	4003	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	-360	-5	-246	0	multi-exon	FALSE	canonical	3	294	junction_2	43.0219582177391	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCCTTGAGTCCAGT	-31346548	False	NA	-2	True	ATTAAA	-21	NA	31346592	31325803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
WTC11_00060775	chr22	-	4076	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	-360	-5	-246	0	multi-exon	FALSE	canonical	0	0	junction_1	162.330488510323	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCCTTGAGTCCAGT	-31346548	False	NA	-2	True	ATTAAA	-21	NA	31346592	31325803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
WTC11_00060778	chr22	-	2514	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	2	0	-2	multi-exon	FALSE	canonical	3	95	junction_1	147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGGCTTTGTGTGTT	-31345732	False	879	-6	True	GATAAA	-15	NA	31345776	31340678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31341684_31342896_31342961_31344331
WTC11_00060779	chr22	-	3721	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	18	-92	0	84	multi-exon	FALSE	canonical	3	88	junction_6	30.5089037803154	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTGCAATCGTGGCT	-31488238	True	NA	NA	False	NA	NA	NA	31489824	31439274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
WTC11_00060780	chr22	-	3693	19	FSM	ENSG00000184708.18	ENST00000397525.5	3695	19	10	-8	10	0	multi-exon	FALSE	canonical	2	3	junction_18	44.988887516808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGTTTATTTCCT	-31489552	False	NA	23	True	ATTAAA	-36	NA	31489577	31439358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489390
WTC11_00060781	chr22	-	3731	19	NIC	ENSG00000184708.18	novel	3647	19	NA	NA	0	73	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	36.5033822211072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGGAGTACAGTGGTG	-31488256	True	NA	96	True	NA	NA	NA	31489842	31439285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447569_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
WTC11_00060782	chr22	-	619	4	FSM	ENSG00000184708.18	ENST00000487671.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	37.9502598439355	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTCTTAGGATTTTAAT	-31449478	False	NA	NA	False	NA	NA	NA	31449490	31444437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31444691_31447425_31447569_31448152_31448233_31449347
WTC11_00060783	chr22	-	2658	8	FSM	ENSG00000241878.12	ENST00000382151.6	2669	8	11	0	11	0	multi-exon	FALSE	canonical	1	4	junction_7	201.499379651651	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31627517	False	NA	0	True	AATAAA	-18	NA	31628210	31618490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31628002
WTC11_00060784	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	25.7336787541584	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31658606	True	NA	0	True	AATAAA	-18	NA	31662215	31618490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
WTC11_00060785	chr22	-	2284	7	FSM	ENSG00000241878.12	ENST00000437808.5	2264	7	0	-20	0	0	multi-exon	FALSE	canonical	2	5	junction_6	161.898802411328	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31658612	True	NA	0	True	AATAAA	-18	NA	31662221	31618490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31662143
WTC11_00060786	chr22	-	2194	7	FSM	ENSG00000241878.12	ENST00000397500.5	2194	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	198.097969589684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGAATTTTTTCAA	-31630138	True	NA	NA	False	NA	NA	NA	31630831	31618613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
WTC11_00060787	chr22	-	2200	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	35	123	0	0	multi-exon	FALSE	canonical	3	366	junction_5	31.8331107304252	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGAATTTTTTCAA	-31658571	True	NA	NA	False	NA	NA	NA	31662180	31618613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
WTC11_00060788	chr22	-	1723	8	FSM	ENSG00000241878.12	ENST00000435900.5	1723	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	133.697343248984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTGATGAGTGACC	-31658571	True	NA	NA	False	NA	NA	NA	31662180	31618976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620600_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
WTC11_00060789	chr22	-	1365	7	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	0	133	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	154.325413763687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCCTGACCGAACCTT	-31658594	True	NA	44	True	TTTAAA	-22	NA	31662203	31619310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
WTC11_00060790	chr22	-	1964	10	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	0	133	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	184.025025136646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCCTGACCGAACCTT	-31658612	True	NA	44	True	TTTAAA	-22	NA	31662221	31619310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31648100_31648277_31650698_31650779_31662143
WTC11_00060791	chr22	-	1760	6	FSM	ENSG00000241878.12	ENST00000474017.5	1760	6	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	27.534705373401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGAGGTGGCGAGAGCC	-31658594	True	NA	-89	True	NA	NA	NA	31662203	31619443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621886_31648100_31648277_31650698_31650779_31662143
WTC11_00060794	chr22	-	11157	9	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	1479	0	intron_retention	FALSE	canonical	1	2	junction_8	29.2208722491304	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31748547	False	NA	-8	True	AATAAA	-22	NA	31748593	31681346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31748123
WTC11_00060795	chr22	-	10831	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	1	-5	1	5	multi-exon	TRUE	canonical	3	39	junction_8	19.8557296516648	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGCCGTTACTTTGTT	-31743451	True	NA	-3	True	AATAAA	-27	NA	31750131	31681341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
WTC11_00060796	chr22	-	11484	9	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-131	0	intron_retention	FALSE	canonical	3	9	junction_8	27.2752176893238	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31750225	False	NA	-8	True	AATAAA	-22	NA	31750271	31681346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749474
WTC11_00060797	chr22	-	11568	9	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-131	0	intron_retention	FALSE	canonical	3	4	junction_8	28.6593680146649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31750225	False	NA	-8	True	AATAAA	-22	NA	31750271	31681346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749390
WTC11_00060799	chr22	-	2025	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	-6	0	6	multi-exon	FALSE	canonical	3	1267	junction_1	99.6411744027721	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTTGCTTTGTCAGTT	-32397327	True	NA	-4	True	AAGAAA	-35	NA	32412247	32387575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
WTC11_00060800	chr22	-	967	5	FSM	ENSG00000100220.12	ENST00000487704.5	767	5	-6	-194	0	194	multi-exon	FALSE	canonical	3	1386	junction_2	100.129915609672	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGAATCCCAACACTTT	-32397327	True	NA	NA	False	NA	NA	NA	32412247	32401367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
WTC11_00060801	chr22	-	628	3	FSM	ENSG00000100220.12	ENST00000463455.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_1	90	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGGAGGATTGCTTGA	-32397328	True	NA	NA	False	NA	NA	NA	32412248	32407878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32408243_32408754_32408834_32412063
WTC11_00060802	chr22	-	8392	14	FSM	ENSG00000185666.15	ENST00000358763.7	7867	14	12	-537	12	537	multi-exon	FALSE	canonical	3	18	junction_4	9.07692307692308	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCTACTTTTCTTGAAGA	-33056775	True	NA	NA	False	TTTAAA	-13	NA	33058369	32507282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
WTC11_00060803	chr22	-	5283	15	FSM	ENSG00000133424.22	ENST00000397394.8	4753	15	-542	12	-542	-12	multi-exon	FALSE	canonical	3	117	junction_9	18.3018901666869	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAAAGTACATGT	-33917723	True	NA	NA	False	AATAAA	-29	NA	33921018	33272520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33919994
WTC11_00060804	chr22	-	3424	13	FSM	ENSG00000133424.22	ENST00000676126.1	3424	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.4322205412043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	NA	False	NA	-10	True	AATAAA	-26	NA	33761558	33273076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370
WTC11_00060805	chr22	-	4752	16	FSM	ENSG00000133424.22	ENST00000354992.7	4193	16	0	-559	0	-9	multi-exon	FALSE	canonical	3	18	junction_15	47.3647782874809	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAGTACATGTCAA	-33920278	False	34	NA	False	AATAAA	-32	NA	33920421	33272517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33856739_33856803_33919994
WTC11_00060807	chr22	-	304	3	FSM	ENSG00000286592.1	ENST00000665218.1	672	3	0	368	0	-368	multi-exon	FALSE	canonical	1	1	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGCCTTGATTTTGGACT	NA	False	NA	NA	False	NA	NA	NA	34893847	34873772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_34873920_34884140_34884224_34893773
WTC11_00060808	chr22	-	5768	3	FSM	ENSG00000100320.23	ENST00000463509.1	2396	3	1978	-5350	1978	-1	multi-exon	FALSE	canonical	3	373	junction_2	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGGGCTGTGTGTAT	-35746644	False	NA	-6	True	AATAAA	-14	NA	35746654	35738736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35744250_35745922_35745996_35746472
WTC11_00060809	chr22	-	6792	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	139	1	-35	-1	multi-exon	TRUE	canonical	3	18	junction_3	130.731508339525	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGGGCTGTGTGTAT	NA	False	NA	-6	True	AATAAA	-14	NA	35840448	35738736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
WTC11_00060810	chr22	-	1868	13	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	3	105	junction_12	98.9069076904586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTGGAATTATAGTAT	-35840110	True	NA	62	True	NA	NA	NA	35840284	35743536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
WTC11_00060811	chr22	-	7375	14	NIC	ENSG00000100320.23	novel	1409	14	NA	NA	-175	-9	combination_of_known_junctions	FALSE	canonical	3	213	junction_5	62.2804308832712	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACCATTCTTTGGGCT	-36028980	False	NA	-14	True	AATAAA	-6	NA	36028999	35738744	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
WTC11_00060813	chr22	-	7371	14	NIC	ENSG00000100320.23	novel	7224	14	NA	NA	-160	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_11	80.5093254181771	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGGGCTGTGTGTAT	-36028965	False	NA	-6	True	AATAAA	-14	NA	36028984	35738736	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
WTC11_00060815	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	84.0459530389312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	-35840110	True	NA	-31	True	NA	NA	NA	35840284	35744147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
WTC11_00060818	chr22	-	2450	6	FSM	ENSG00000128335.14	ENST00000249066.10	2685	6	212	23	-69	-23	multi-exon	FALSE	canonical	0	0	junction_5	10.476640682967	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAAACTCACCTACTCA	-36239720	False	NA	-29	True	NA	NA	NA	36239742	36226232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440_36239562_36239731
WTC11_00060819	chr22	-	7478	42	NNC	ENSG00000100345.23	novel	7451	41	NA	NA	0	39481	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	251.452558257287	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATAATGGCAGAATGG	-36373604	True	NA	NA	False	NA	NA	NA	36387967	36241798	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_36241828_36281281_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
WTC11_00060820	chr22	-	7470	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	-19	0	19	multi-exon	FALSE	canonical	3	729	junction_34	194.160140090596	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGCGGCCAGGGGGCC	-36373604	True	NA	14	True	AATAAA	-35	NA	36387967	36281260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
WTC11_00060821	chr22	-	788	4	FSM	ENSG00000100345.23	ENST00000486218.1	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_2	54.2975342186201	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAAGAGGAGGCCCAGCGG	-36286005	False	NA	NA	False	NA	NA	NA	36286021	36284213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36284512_36285120_36285330_36285657_36285782_36285864
WTC11_00060822	chr22	-	618	2	FSM	ENSG00000100345.23	ENST00000459960.1	687	2	69	0	69	0	multi-exon	FALSE	canonical	3	1105	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGGTGTGCCCTGGGA	-36297216	False	NA	NA	False	AAAACA	-41	NA	36297254	36295511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36295718_36296842
WTC11_00060823	chr22	-	387	3	FSM	ENSG00000100345.23	ENST00000472210.5	387	3	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	90.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAGAAGAGGAGCAAATG	-36321871	False	NA	NA	False	NA	NA	NA	36321922	36320240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36320364_36320797_36320897_36321757
WTC11_00060824	chr22	-	1292	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	-12	0	12	multi-exon	FALSE	canonical	3	47	junction_3	315.140533025435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGGGCTCAGAGCAC	-36477887	True	NA	-2	True	AATAAA	-31	NA	36481634	36467033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
WTC11_00060825	chr22	-	1348	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	-12	0	12	multi-exon	FALSE	canonical	3	660	junction_3	26.2424592343528	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGGGCTCAGAGCAC	-36477893	True	NA	-2	True	AATAAA	-31	NA	36481640	36467033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
WTC11_00060828	chr22	-	4906	9	FSM	ENSG00000100350.16	ENST00000397224.9	4906	9	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	10.5475115548645	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-36505964	True	NA	-16	True	AGTAAA	-19	NA	36507040	36487189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36507008
WTC11_00060829	chr22	-	2298	4	FSM	ENSG00000100350.16	ENST00000366463.6	2489	4	191	0	191	0	multi-exon	FALSE	canonical	3	44	junction_3	8.28653526310404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAGTTAATTAAAT	-36497130	False	NA	NA	False	NA	NA	NA	36498206	36488598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990
WTC11_00060831	chr22	-	1896	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	-16	0	16	multi-exon	TRUE	canonical	3	1480	junction_9	105.668522913372	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAACGATTTACAGTCGT	-36501563	True	NA	-7	True	AATAAA	-39	NA	36529166	36510838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
WTC11_00060832	chr22	-	883	7	FSM	ENSG00000100353.18	ENST00000458572.1	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	647.184586411704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAACCTGAGCGTGGAG	-36519491	False	60	NA	False	NA	NA	NA	36519501	36511700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517494_36518762_36518911_36519404
WTC11_00060833	chr22	-	996	10	FSM	ENSG00000100353.18	ENST00000455547.5	996	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	719.8651279713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGGGTCCAAACTCT	-36501563	True	NA	NA	False	NA	NA	NA	36529166	36518812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36526819_36526906_36529075
WTC11_00060838	chr22	-	1078	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	-5	0	-4	multi-exon	FALSE	canonical	0	0	junction_3	205.80006478781	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTCCTTCCACTCTTG	-36772109	True	NA	-3	True	AATAAA	-22	NA	36776119	36758205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
WTC11_00060841	chr22	-	561	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-17	7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	18.3915741577495	170	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGGAAGACCCAGGCC	-36817482	True	NA	-11	True	AATAAA	-24	NA	36817531	36800693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817506
WTC11_00060843	chr22	-	1131	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	-6	0	0	multi-exon	FALSE	canonical	3	30	junction_2	41	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCCTGCCTCTCTCTG	-37018196	True	NA	3	True	AATAAA	-22	NA	37019447	37010858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37011326_37018137_37018754_37019399
WTC11_00060844	chr22	-	1818	2	FSM	ENSG00000128311.14	ENST00000403892.7	1797	2	-23	2	-23	-2	multi-exon	FALSE	canonical	3	112	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGCCTGCCTCTCTC	-37019443	False	NA	1	True	AATAAA	-20	NA	37019490	37010860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37011326_37018137
WTC11_00060845	chr22	-	1102	3	NIC	ENSG00000128311.14	novel	1125	3	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	51	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-37019560	False	NA	-3	True	AATAAA	-16	NA	37019607	37010864	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_37011326_37018137_37018754_37019582
WTC11_00060846	chr22	-	2913	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	-20	0	19	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-37188106	True	NA	-5	True	ATTAAA	-21	NA	37188267	37180165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37182736_37185217_37185456_37188162
WTC11_00060847	chr22	-	1599	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	48	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_1	7.58653778449403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGACTGGTTCTTTC	-37188077	True	NA	-6	True	ATTAAA	-20	NA	37188238	37180166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
WTC11_00060848	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	3.74165738677394	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-37243762	True	NA	-10	True	AATAAA	-14	NA	37244269	37225269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
WTC11_00060849	chr22	-	2071	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	2	0	-2	multi-exon	FALSE	canonical	2	13	junction_5	3.98978286964827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGGTCCAGTTTTCTG	-37486307	True	NA	-2	True	ATTAAA	-19	NA	37486384	37469064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
WTC11_00060850	chr22	-	966	5	FSM	ENSG00000100060.18	ENST00000438891.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	8.01171017948103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGCCTTGGGGGCA	-37486302	True	NA	NA	False	NA	NA	NA	37486379	37474511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485922
WTC11_00060851	chr22	-	4217	21	FSM	ENSG00000100065.15	ENST00000403299.5	4113	21	-12	-92	-12	92	multi-exon	FALSE	canonical	3	45	junction_20	12.709838708654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCGCTTGCCTGTCAGG	-37519510	False	NA	90	True	NA	NA	NA	37519554	37490269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965_37519218_37519342
WTC11_00060852	chr22	-	1911	5	FSM	ENSG00000100065.15	ENST00000467812.1	1910	5	0	-1	0	0	multi-exon	FALSE	canonical	3	79	junction_1	8.31790237980706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	37494576	37490361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085
WTC11_00060853	chr22	-	4271	20	FSM	ENSG00000100065.15	ENST00000251973.10	4111	20	-160	0	-33	0	multi-exon	FALSE	canonical	3	69	junction_5	9.83041805385577	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	37519575	37490361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965
WTC11_00060854	chr22	-	2087	8	FSM	ENSG00000100124.15	ENST00000215941.9	2087	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	9.60442075084092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGTGGTAATTTAT	-37843565	True	NA	-4	True	AATAAA	-20	NA	37844334	37830854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833756_37838499_37838599_37840186_37840235_37843910
WTC11_00060855	chr22	-	2403	5	FSM	ENSG00000100124.15	ENST00000498417.5	2403	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	34.2563862659213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGTGTGGTAATTTA	-37833959	False	NA	-5	True	AATAAA	-19	NA	37834728	37830855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37832018_37832636_37832745_37832957_37833207_37833683_37833756_37833916
WTC11_00060859	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	-37848867	True	NA	-2	True	AATAAA	-19	NA	37849318	37848178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37848200_37849300
WTC11_00060860	chr22	-	2887	4	FSM	ENSG00000100146.19	ENST00000396884.8	2885	4	12	-14	0	2	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTGGCCTGTCTCTTC	-37984334	True	NA	-3	True	AATAAA	-32	NA	37984543	37972297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37974199_37977866_37978136_37983356_37983869_37984338
WTC11_00060861	chr22	-	1627	9	FSM	ENSG00000128298.18	ENST00000332536.10	1865	9	0	238	0	10	multi-exon	TRUE	canonical	2	10	junction_7	2.59807621135332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGACTGGTGGTGTCTT	-38097573	True	NA	-6	True	AATAAA	-26	NA	38097782	38084889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747_38088965_38089095_38089232_38089521_38089675_38097031_38097179_38097690
WTC11_00060862	chr22	-	751	4	FSM	ENSG00000128298.18	ENST00000428572.1	751	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.58653778449403	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCGGCAGCCTGAGCAG	-38088913	False	NA	NA	False	NA	NA	NA	38088938	38085164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38085376_38086241_38086450_38087123_38087265_38088747
WTC11_00060863	chr22	-	781	4	FSM	ENSG00000184381.20	ENST00000452794.5	781	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.657891697365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGATTTCCAGACCTG	NA	False	NA	NA	False	NA	NA	NA	38132877	38126995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38127459_38128268_38128431_38129453_38129563_38132830
WTC11_00060864	chr22	-	250	2	FSM	ENSG00000184381.20	ENST00000480154.1	323	2	0	73	0	-73	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCAGGCCCCTGGATC	NA	False	NA	NA	False	NA	NA	NA	38129506	38128233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38128431_38129453
WTC11_00060865	chr22	-	675	3	FSM	ENSG00000184381.20	ENST00000498338.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGATCCTGAGGTGG	NA	False	NA	NA	False	NA	NA	NA	38143494	38134987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38135085_38139981_38140170_38143104
WTC11_00060866	chr22	-	1757	5	NNC	ENSG00000213923.13	novel	2817	11	NA	NA	0	83345	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	377.362226514525	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGACCATCATGGCTAA	-38294522	False	NA	NA	False	NA	NA	NA	38294534	38207345	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38207460_38290693_38291939_38293254_38293320_38294108_38294249_38294341
WTC11_00060867	chr22	-	4976	1	FSM	ENSG00000198792.13	ENST00000633056.1	4792	1	-163	-21	-163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	-38224237	False	NA	-1	True	AATATA	-18	NA	38224266	38219290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38219300_38224300
WTC11_00060868	chr22	-	3587	9	FSM	ENSG00000198792.13	ENST00000361906.8	3587	9	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_3	20.1769515784719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	-38265666	True	NA	-1	True	AATATA	-18	NA	38273010	38219290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
WTC11_00060869	chr22	-	3593	9	FSM	ENSG00000198792.13	ENST00000361684.8	3593	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	134.978644144176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAGATAATATAGATT	-38265320	False	NA	-34	True	AATAAA	-17	NA	38272664	38219323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272498
WTC11_00060870	chr22	-	504	3	FSM	ENSG00000198792.13	ENST00000474416.1	561	3	57	0	57	0	multi-exon	FALSE	canonical	3	419	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCGGAGTGAGCCATT	NA	False	NA	NA	False	NA	NA	NA	38231399	38226598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38226871_38230668_38230745_38231243
WTC11_00060872	chr22	-	2817	11	FSM	ENSG00000213923.13	ENST00000396832.6	2817	11	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	165.535766527962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCAGCCCTTTGTCCA	-38312271	True	NA	-8	True	AATAAA	-19	NA	38317433	38290690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
WTC11_00060873	chr22	-	2865	11	NNC	ENSG00000213923.13	novel	2817	11	NA	NA	-39	8	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	300.858504948755	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCCACCTCTGTG	-38317426	True	NA	0	True	AATAAA	-27	NA	38317478	38290682	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300948_38302860_38303010_38303137_38303249_38314081_38314170_38317159
WTC11_00060877	chr22	-	539	2	FSM	ENSG00000213923.13	ENST00000494610.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTAACATTCCCTGGC	-38294522	False	NA	NA	False	NA	NA	NA	38294534	38293902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38294249_38294341
WTC11_00060878	chr22	-	1631	8	FSM	ENSG00000213923.13	ENST00000413574.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	347.812288102508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-38312249	True	NA	-4	True	AATAAA	-16	NA	38317411	38296204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
WTC11_00060879	chr22	-	2128	8	FSM	ENSG00000213923.13	ENST00000405675.7	2127	8	0	-1	0	0	multi-exon	FALSE	canonical	3	37	junction_1	344.53091446256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-38312277	True	NA	-4	True	AATAAA	-16	NA	38317439	38296204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
WTC11_00060880	chr22	-	1419	8	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	1631	8	NA	NA	8269	0	multi-exon	FALSE	canonical	3	27	junction_1	436.460438397015	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-38334603	True	NA	-5	True	AATAAA	-15	NA	38336165	38296205	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
WTC11_00060881	chr22	-	3162	4	FSM	ENSG00000213923.13	ENST00000612795.2	3162	4	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_3	37.6769897358528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAAGGACAGAGGTCCA	-38302810	True	NA	-60	True	NA	NA	NA	38302990	38296302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38298935_38299894_38300066_38300723_38300953_38302860
WTC11_00060882	chr22	-	787	4	FSM	ENSG00000213923.13	ENST00000442216.1	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	434.404061777614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	-38300013	False	180	-2	True	ATTAAA	-18	NA	38300025	38297601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894
WTC11_00060885	chr22	-	1756	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	-61	-721	0	721	multi-exon	FALSE	canonical	2	4	junction_1	50.231339818882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCAGGTGCAGTGGTTC	-38396877	True	NA	NA	False	AATAAA	-24	NA	38398921	38349655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
WTC11_00060886	chr22	-	2851	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	0	-4478	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	44.285296657017	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTTTTTTTTTAC	-38396876	True	NA	-2	True	ATTAAA	-25	NA	38398920	38354854	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38357295_38361398_38361561_38380369_38380424_38380936_38380991_38398779
WTC11_00060888	chr22	-	5250	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	9	-4580	0	3839	multi-exon	FALSE	canonical	3	67	junction_1	27.9324582201822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-38396876	True	NA	NA	False	NA	NA	NA	38398920	38356559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
WTC11_00060890	chr22	-	6335	8	NIC	ENSG00000100201.23	novel	4791	13	NA	NA	-953	-1	intron_retention	FALSE	canonical	1	3	junction_2	22.1939502696439	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTGAGCTTTTATTG	-38495696	False	NA	-12	True	AATAAA	-15	NA	38495999	38483440	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38486441_38487872_38490437_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795
WTC11_00060891	chr22	-	4793	13	FSM	ENSG00000100201.23	ENST00000396821.8	4791	13	0	-2	0	0	multi-exon	FALSE	canonical	3	34	junction_1	9.31694990624912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGCTTTTATTGCTT	-38450333	True	NA	-9	True	AATAAA	-18	NA	38506337	38483437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38486441_38487872_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
WTC11_00060892	chr22	-	4761	13	FSM	ENSG00000100201.23	ENST00000403230.3	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.44377069919689	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGCTTTTATTGCTT	-38450307	True	NA	-9	True	AATAAA	-18	NA	38506311	38483437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38486441_38487878_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
WTC11_00060893	chr22	-	6445	12	FSM	ENSG00000100201.23	ENST00000216019.11	6441	12	0	-4	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.6676846850762	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACTGGAAGAGATTAAT	-38450290	True	NA	NA	False	AATATA	-15	NA	38506294	38485676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38486441_38487878_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
WTC11_00060896	chr22	-	1960	11	FSM	ENSG00000100206.11	ENST00000428462.6	2082	11	120	2	120	-2	multi-exon	FALSE	canonical	2	6	junction_5	5.86515131944607	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTATGGTGAAAATATG	-38567668	False	NA	-2	True	AATAAA	-17	NA	38568289	38518950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205
WTC11_00060897	chr22	-	642	5	FSM	ENSG00000184949.18	ENST00000484582.1	642	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.29128784747792	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGATCTTCTGTTATA	-38655444	False	NA	NA	False	NA	NA	NA	38656281	38638771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38638823_38639614_38639725_38645562_38645646_38650026_38650263_38656119
WTC11_00060898	chr22	-	1446	2	FSM	ENSG00000228274.5	ENST00000656432.1	1737	2	0	291	0	-291	multi-exon	FALSE	canonical	1	1	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTAAAGCCCTGGGCA	-38681635	True	NA	NA	False	NA	NA	NA	38681847	38675165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38676490_38681725
WTC11_00060899	chr22	-	3648	4	FSM	ENSG00000100221.11	ENST00000216039.9	3648	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	3.74165738677394	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-38700640	False	82	-4	True	AATAAA	-28	NA	38700667	38685542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802
WTC11_00060900	chr22	-	2409	18	FSM	ENSG00000100242.16	ENST00000689035.1	3960	18	-23	1574	-21	-355	multi-exon	FALSE	canonical	3	52	junction_17	10.0228113523524	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTACCGCTTCAGAGTG	-38754593	True	NA	NA	False	NA	NA	NA	38756021	38736307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38755762
WTC11_00060906	chr22	-	1478	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	-4	0	4	multi-exon	FALSE	canonical	3	68	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACAGTCTCTTGATGT	-38793065	True	NA	-2	True	ATTAAA	-20	NA	38794143	38778503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
WTC11_00060907	chr22	-	390	3	FSM	ENSG00000100246.13	ENST00000406199.3	631	3	33	208	-17	-208	multi-exon	FALSE	canonical	3	68	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCCAGCAGTGCAGGC	-38793087	True	NA	NA	False	NA	NA	NA	38794165	38780925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38781010_38782662_38782871_38794067
WTC11_00060909	chr22	-	5831	5	FSM	ENSG00000221890.6	ENST00000333039.4	5830	5	0	-1	0	1	multi-exon	FALSE	canonical	3	21	junction_4	5.33853912601566	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTTTGCAGGGATGG	-38843794	True	NA	0	True	AATAAA	-19	NA	38844028	38818450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38822834_38823082_38823263_38826499_38826748_38828286_38828513_38843234
WTC11_00060910	chr22	-	6020	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	32	0	-32	multi-exon	FALSE	canonical	3	24	junction_1	6.04152298679729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGTTGGGGTGTGTCTG	-38868332	True	NA	-3	True	AATAAA	-30	NA	38872216	38861453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
WTC11_00060911	chr22	-	3191	5	FSM	ENSG00000183741.12	ENST00000216083.6	3191	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.833114033569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAATAGAAAAAAAT	-38868332	True	NA	NA	False	AAAAAG	-9	NA	38872216	38864228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38867148_38871479_38871547_38871691_38871758_38871901_38871946_38872121
WTC11_00060912	chr22	-	1293	4	FSM	ENSG00000183741.12	ENST00000469420.1	2213	4	0	920	0	-920	multi-exon	FALSE	canonical	3	35	junction_3	2.05480466765633	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTTCTCTTGGGGAGG	-38868365	True	NA	NA	False	NA	NA	NA	38872249	38870491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38871547_38871691_38871758_38871901_38871946_38872121
WTC11_00060913	chr22	-	693	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	-2	0	2	multi-exon	FALSE	canonical	3	4	junction_3	1.92028643696715	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAATCATAGATGCGGG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
WTC11_00060914	chr22	-	3747	4	ISM	ENSG00000100307.13	ENST00000216133.10	4111	6	11244	15	-6657	-15	3prime_fragment	FALSE	canonical	3	13	junction_2	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAAAATTCCT	-39141363	False	NA	97	True	ATTAAA	-18	NA	39141436	39130786	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_39134049_39134400_39134753_39138635_39138703_39141370
WTC11_00060915	chr22	-	3002	2	FSM	ENSG00000100307.13	ENST00000482294.1	3014	2	0	12	0	-12	multi-exon	FALSE	canonical	2	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCGTCCCCCACAAAAAAAA	-39152607	False	NA	NA	False	NA	NA	NA	39152674	39147129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39149833_39152375
WTC11_00060916	chr22	-	3412	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	316	0	-316	multi-exon	FALSE	canonical	3	25	junction_4	4.11298755975102	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGTCTGTCTGTTGGCA	-39244481	True	NA	-3	True	AATGAA	-6	NA	39244982	39223674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
WTC11_00060917	chr22	-	1289	9	FSM	ENSG00000100316.16	ENST00000401609.5	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	29191	junction_1	3362.7904869877	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-39318306	False	NA	-1	True	AATAAA	-19	NA	39318614	39312881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399
WTC11_00060918	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_9	5404.97071176725	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-38740323	True	NA	-1	True	AATAAA	-19	NA	39319623	39312881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
WTC11_00060919	chr22	-	1401	3	FSM	ENSG00000100316.16	ENST00000467105.1	1396	3	0	-5	0	0	multi-exon	FALSE	canonical	3	29191	junction_1	4649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-39314657	False	NA	-1	True	AATAAA	-19	NA	39314965	39312881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39314209_39314685
WTC11_00060920	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_7	15278.4201481116	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39320081	False	NA	-3	True	AATAAA	-17	NA	39320389	39312883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
WTC11_00060921	chr22	-	1205	8	FSM	ENSG00000100316.16	ENST00000402527.5	1205	8	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_7	12705.9438669868	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAATGACTTTGTCA	-38740323	True	NA	NA	False	NA	NA	NA	39319623	39313706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319389
WTC11_00060922	chr22	-	916	6	FSM	ENSG00000100316.16	ENST00000453303.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	14325.3737459097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAACAAGAAGGTGAGG	-39318803	False	NA	NA	False	NA	NA	NA	39319111	39314699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319027
WTC11_00060923	chr22	-	557	2	FSM	ENSG00000100316.16	ENST00000484358.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	33544	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGGTGGCTTGAGTTGCT	-39316760	False	NA	NA	False	NA	NA	NA	39317068	39315361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39315556_39316705
WTC11_00060924	chr22	-	810	5	FSM	ENSG00000100316.16	ENST00000427905.5	782	5	-28	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_4	14830.2467844436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTGCGGTGGCTTG	-38740323	True	NA	NA	False	NA	NA	NA	39319623	39315368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319498
WTC11_00060925	chr22	-	711	5	FSM	ENSG00000100316.16	ENST00000420536.1	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	14411.8389527499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTCCTCTGCGCCAG	-38740323	True	NA	NA	False	NA	NA	NA	39319623	39315551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319594
WTC11_00060926	chr22	-	827	3	FSM	ENSG00000100316.16	ENST00000484615.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_2	7396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTAACCTTGTGGACC	-38740349	True	NA	NA	False	NA	NA	NA	39319649	39317050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39317630_39318399_39318593_39319594
WTC11_00060931	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	123.104291828785	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	-39519383	True	NA	-25	True	AATAAA	-14	NA	39532748	39529092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
WTC11_00060932	chr22	-	2801	2	FSM	ENSG00000187051.9	ENST00000488602.1	2801	2	0	0	0	0	multi-exon	FALSE	canonical	3	988	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTGTGTTTGCTGCTG	-39518728	False	NA	-29	True	AATAAA	-10	NA	39532093	39529096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819
WTC11_00060933	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	423.869304739091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-39519396	True	NA	-88	True	NA	NA	NA	39532761	39529155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
WTC11_00060936	chr22	-	4350	14	FSM	ENSG00000196588.21	ENST00000402042.7	4343	14	0	-7	0	-1	multi-exon	FALSE	canonical	3	26	junction_6	26.5719966490507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCATCTTATTCAGTCC	-40632128	True	NA	-18	True	AATAAA	-20	NA	40636691	40410282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
WTC11_00060937	chr22	-	4528	15	FSM	ENSG00000196588.21	ENST00000355630.10	4522	15	0	-6	0	-1	multi-exon	FALSE	canonical	3	63	junction_13	19.5235336798167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCATCTTATTCAGTCC	-40632156	True	NA	-18	True	AATAAA	-20	NA	40636719	40410282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
WTC11_00060938	chr22	-	4423	14	NIC	ENSG00000196588.21	novel	4506	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	19.2012080487803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTGTTAGTCCATCTT	-40632122	True	NA	-27	True	AATAAA	-11	NA	40636685	40410291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
WTC11_00060940	chr22	-	744	1	FSM	ENSG00000230071.2	ENST00000438116.2	1304	1	425	135	425	-135	mono-exon	FALSE	NA	NA	NA	NA	NA	2268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAAGAAAGGAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	40587578	40586834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40586800_40587600
WTC11_00060941	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_7	28.66372925842	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814922	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
WTC11_00060942	chr22	-	2049	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	11	0	1	0	multi-exon	FALSE	canonical	3	25	junction_5	141.236700455496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814964	True	NA	-2	True	ATTAAA	-18	NA	40819388	40769629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
WTC11_00060943	chr22	-	2405	5	FSM	ENSG00000100372.15	ENST00000402844.7	2405	5	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	27.3358738656733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATATTCTTGAAAA	NA	False	NA	-16	True	AATAAA	-11	NA	40780194	40770087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008
WTC11_00060944	chr22	-	3658	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	-55	-391	-55	391	multi-exon	FALSE	canonical	3	1968	junction_3	105.175414278219	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCCCCCCACCCCCGAC	-40815590	True	NA	NA	False	AAAACA	-16	NA	40856694	40824143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
WTC11_00060945	chr22	-	4127	1	FSM	ENSG00000172404.5	ENST00000307221.5	2565	1	-566	-996	-566	996	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40862679	40858552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40858600_40862700
WTC11_00060946	chr22	-	315	1	FSM	ENSG00000215771.2	ENST00000452297.1	462	1	223	-76	223	76	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGAGGCTGAGGCAGGT	-41189580	False	NA	NA	False	NA	NA	NA	41189965	41189650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41189600_41190000
WTC11_00060947	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_15	65.4297248113492	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	-41279838	True	NA	-1	True	CATAAA	-17	NA	41286187	41244778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
WTC11_00060948	chr22	-	4222	15	FSM	ENSG00000100401.20	ENST00000455915.6	4222	15	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_9	57.1324990612138	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGACTCAGAAACTCT	-41276165	False	NA	-21	True	AATAAA	-14	NA	41282514	41245614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932
WTC11_00060949	chr22	-	759	7	FSM	ENSG00000100401.20	ENST00000446258.5	759	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	307.879666247852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGAACTCGGGGTGGCC	-41274599	True	NA	NA	False	NA	NA	NA	41274660	41256020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41264663_41264844_41268096_41268157_41274599
WTC11_00060950	chr22	-	1395	11	NNC	ENSG00000100401.20	novel	3828	16	NA	NA	22	-52	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	330.774787430965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGAGGTGCTGGAGGGC	-41279816	True	NA	NA	False	NA	NA	NA	41286165	41256072	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285362_41285519_41285985
WTC11_00060952	chr22	-	4339	2	FSM	ENSG00000183864.5	ENST00000327492.4	4337	2	0	-2	0	2	multi-exon	FALSE	canonical	3	150	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCTCCTGGCTT	-41442374	True	NA	-5	True	ATTAAA	-19	NA	41446801	41433491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41437408_41446378
WTC11_00060953	chr22	-	1071	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	-18	0	18	multi-exon	FALSE	canonical	3	639	junction_3	42.055518860985	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACTCTAGGAATTTAT	-41453041	True	NA	-4	True	AATAAA	-40	NA	41468692	41459698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
WTC11_00060955	chr22	-	1465	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	-1	0	0	multi-exon	FALSE	canonical	3	25	junction_3	112.819501860272	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-41540717	True	NA	-30	True	AATAAA	-15	NA	41544455	41528841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
WTC11_00060956	chr22	-	1330	5	FSM	ENSG00000100413.17	ENST00000337566.9	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	130.171761530679	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-41540724	True	NA	-30	True	AATAAA	-15	NA	41544462	41528841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41540698_41540796_41543990
WTC11_00060960	chr22	-	2542	3	FSM	ENSG00000100417.12	ENST00000463617.5	2538	3	0	-4	0	1	multi-exon	FALSE	canonical	3	93	junction_2	3	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTCAGCTGTGTCTGA	-41579675	False	NA	-24	True	ATTAAA	-16	NA	41580689	41576898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41577441_41577807_41577924_41578805
WTC11_00060961	chr22	-	1225	5	FSM	ENSG00000100417.12	ENST00000482178.5	2020	5	799	-4	799	1	multi-exon	FALSE	canonical	3	65	junction_4	12.8330627677106	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTCAGCTGTGTCTGA	-41583589	False	NA	-24	True	ATTAAA	-16	NA	41584603	41576898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526
WTC11_00060962	chr22	-	1243	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	-1	0	1	multi-exon	FALSE	canonical	3	65	junction_5	11.9965981572669	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTCAGCTGTGTCTGA	-41588826	True	NA	-24	True	ATTAAA	-16	NA	41589840	41576898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
WTC11_00060966	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	19.2083315256688	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	-41616672	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
WTC11_00060967	chr22	-	3192	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7058011369565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	-41616672	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_41599586_41600173_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
WTC11_00060969	chr22	-	1488	1	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCATACTGTATTAT	-41667938	False	NA	NA	False	AATAAA	-19	NA	41668114	41666626	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_-_41666600_41668100
WTC11_00060970	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	302	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	-41665729	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41675196_41680243_41680365_41688793
WTC11_00060971	chr22	-	1847	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	-47	-764	-47	82	multi-exon	FALSE	canonical	3	33	junction_3	1146.43573255935	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAAGACTTTTTTTTTC	NA	False	NA	75	True	AATGAA	-33	NA	41688942	41673850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
WTC11_00060972	chr22	-	381	1	FSM	ENSG00000285531.1	ENST00000647971.1	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCTTAAAACCTTGGA	-41670464	False	NA	NA	False	NA	NA	NA	41677125	41676744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41676700_41677100
WTC11_00060973	chr22	-	486	2	FSM	ENSG00000234965.3	ENST00000457093.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCACCCCTGGGTGGCT	-41914496	False	NA	NA	False	NA	NA	NA	41914566	41911292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41911350_41914137
WTC11_00060974	chr22	-	2935	1	FSM	ENSG00000283829.1	ENST00000582688.1	76	1	-1673	-1186	-1673	1186	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTTCCACCTGGGC	-41924866	False	NA	-18	True	AATAAA	-13	NA	41924970	41922035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41922000_41925000
WTC11_00060975	chr22	-	918	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	-13	0	13	multi-exon	FALSE	canonical	3	48	junction_1	267.08841648829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGACTTTGTAGATG	-41940365	False	NA	-6	True	AAAAAG	-25	NA	41946688	41938723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
WTC11_00060976	chr22	-	1015	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	-13	0	13	multi-exon	FALSE	canonical	3	571	junction_2	19.4550764583437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGACTTTGTAGATG	-41940370	False	NA	-6	True	AAAAAG	-25	NA	41946693	41938723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
WTC11_00060977	chr22	-	951	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	-13	0	13	multi-exon	FALSE	canonical	3	571	junction_2	18.0510387512741	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGACTTTGTAGATG	-41940829	True	NA	-6	True	AAAAAG	-25	NA	41947152	41938723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
WTC11_00060981	chr22	-	520	4	NNC	ENSG00000184983.11	novel	1072	3	NA	NA	0	27627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2069.01248586534	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	42090772	42057898	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42057935_42086113_42086315_42087059_42087176_42090605
WTC11_00060982	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	11.9732775379175	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-42069774	True	NA	22	True	NA	NA	NA	42070812	42058333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
WTC11_00060983	chr22	-	1875	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	-6	0	0	multi-exon	FALSE	canonical	3	14	junction_9	60.1128568241067	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42070832	False	NA	-34	True	NA	NA	NA	42070842	42059795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
WTC11_00060984	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	56.7211067471121	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42070820	False	NA	-34	True	NA	NA	NA	42070830	42059795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
WTC11_00060985	chr22	-	1113	3	FSM	ENSG00000184983.11	ENST00000498737.8	1072	3	-42	1	-42	0	multi-exon	FALSE	canonical	3	4072	junction_1	288.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-1	True	AATAAA	-24	NA	42090814	42085526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42086315_42087059_42087176_42090605
WTC11_00060987	chr22	-	1189	1	FSM	ENSG00000213790.2	ENST00000396387.2	1189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTTACTGCTCAGAT	NA	False	NA	NA	False	AAGAAA	-4	NA	42108953	42107764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42107800_42109000
WTC11_00060988	chr22	-	806	2	Genic_Genomic	ENSG00000213790.2	novel	1189	1	NA	NA	10	-12	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAATAAAATTTAGT	NA	False	NA	NA	False	NA	NA	NA	42108943	42107776	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_-_42107867_42108227
WTC11_00060989	chr22	-	7498	5	NIC	ENSG00000100207.21	novel	7624	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	34.7922405142296	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTCTGTTTACTTTAA	-42267160	True	NA	-15	True	AATAAA	-19	NA	42270653	42160010	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_42161359_42169846_42169897_42179608_42179703_42209650_42215342_42270338
WTC11_00060990	chr22	-	7626	6	FSM	ENSG00000100207.21	ENST00000677622.1	7624	6	0	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_2	38.7845329996379	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTCTGTTTACTTTAA	-42267160	True	NA	-15	True	AATAAA	-19	NA	42270653	42160010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42161359_42168608_42168737_42169846_42169897_42179608_42179703_42209650_42215342_42270338
WTC11_00060991	chr22	-	6138	4	FSM	ENSG00000100207.21	ENST00000335626.8	6237	4	99	0	99	0	multi-exon	FALSE	canonical	3	60	junction_1	25.9529488797623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTTTTAGTCTGGA	NA	False	NA	NA	False	ATTAAA	-25	NA	42215341	42161055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42161359_42169846_42169897_42179608_42179703_42209650
WTC11_00060993	chr22	-	783	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	-3	40	3	multi-exon	FALSE	canonical	3	119	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTCCATTTCTGTTGA	-42368510	True	NA	-9	True	AATAAA	-21	NA	42369168	42364396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42364726_42368714
WTC11_00060994	chr22	-	1288	2	FSM	ENSG00000229891.3	ENST00000669665.2	1290	2	10	-8	10	-5	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTCTGTTGAGTGTT	-42368591	True	NA	-4	True	AATAAA	-26	NA	42369249	42364391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42365145_42368714
WTC11_00060996	chr22	-	5428	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	-9	0	9	multi-exon	FALSE	canonical	3	797	junction_4	411.459495778949	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTTTTTTTT	-42506293	True	NA	2	True	AATAAA	-23	NA	42519796	42508334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
WTC11_00060999	chr22	-	1970	10	NNC	ENSG00000100243.22	novel	3048	10	NA	NA	0	93956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	542.594794585343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCCTGTAATCCCAG	-42639713	True	NA	NA	False	AAAAAG	-1	NA	42649392	42521773	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42521804_42618815_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
WTC11_00061000	chr22	-	2347	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	39	0	-39	multi-exon	FALSE	canonical	3	109	junction_1	334.148262339474	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAACGTAATAAAAGTC	-42578430	True	NA	NA	False	NA	NA	NA	42582038	42555250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
WTC11_00061001	chr22	-	2332	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	27	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	335.853473341509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGACAGGAAGGCCTTGC	-42578403	True	NA	NA	False	NA	NA	NA	42582011	42573243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
WTC11_00061003	chr22	-	3362	9	FSM	ENSG00000100227.19	ENST00000252115.10	3362	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_6	61.2840466597956	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603018	True	NA	-6	True	AATAAA	-16	NA	42614883	42583720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
WTC11_00061004	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	166.483559278999	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603066	True	NA	-6	True	AATAAA	-16	NA	42614931	42583720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
WTC11_00061005	chr22	-	3477	9	FSM	ENSG00000100227.19	ENST00000451060.6	3491	9	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_7	205.199293371103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGAGTTATCTTTTTT	-42603083	True	NA	-7	True	AATAAA	-15	NA	42614948	42583721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602108_42602769_42603161_42614798
WTC11_00061008	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_8	91.8925153372134	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-42639713	True	NA	-2	True	AATAAA	-15	NA	42649392	42617839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
WTC11_00061009	chr22	-	3520	6	FSM	ENSG00000100243.22	ENST00000470741.1	3938	6	440	-22	440	-7	multi-exon	FALSE	canonical	3	1600	junction_1	71.1971909558235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAGCAGAAAAAAAAAAAG	NA	False	NA	-49	True	NA	NA	NA	42632908	42618852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881
WTC11_00061011	chr22	-	2100	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	-8	0	8	multi-exon	FALSE	canonical	3	28	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTGGTGAAGTGTG	-42719685	True	NA	-6	True	AATAAA	-24	NA	42720870	42692112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42693998_42695490_42695632_42720796
WTC11_00061013	chr22	-	2796	17	NNC	ENSG00000242247.11	novel	2728	16	NA	NA	-48	74278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.841549818428	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATTACCAGTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	42857342	42722223	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42722251_42796529_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
WTC11_00061014	chr22	-	1011	1	FSM	ENSG00000234009.1	ENST00000426545.1	891	1	-51	-69	-51	69	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGCCAAGTAATTAA	NA	False	NA	NA	False	AATAAA	-23	NA	42777347	42776336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42776300_42777300
WTC11_00061015	chr22	-	2715	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	13	0	-13	multi-exon	FALSE	canonical	3	81	junction_5	17.899224067602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCCTGAAAGCTTTCG	-42855786	True	NA	-10	True	AATAAA	-28	NA	42857273	42796514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
WTC11_00061016	chr22	-	801	8	FSM	ENSG00000242247.11	ENST00000453516.5	817	8	16	0	16	0	multi-exon	FALSE	canonical	3	29	junction_2	37.053739242305	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGGGGCACTGAACAAG	NA	False	NA	NA	False	NA	NA	NA	42831636	42807073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42807164_42808766_42808891_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548
WTC11_00061017	chr22	-	3276	12	NNC	ENSG00000100266.19	novel	3251	11	NA	NA	0	11241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.472769064353	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGATGTGGTGGTGCG	-43007308	True	NA	NA	False	NA	NA	NA	43015149	42824170	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42824196_42869772_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
WTC11_00061020	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	8.49470423263812	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	-43087966	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
WTC11_00061021	chr22	-	2057	4	FSM	ENSG00000100294.13	ENST00000290429.11	2057	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	24.5130350811336	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTGGGTGGTTGTTCA	-43141046	True	NA	NA	False	NA	NA	NA	43143398	43132208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43133487_43137080_43137299_43141161_43141250_43142925
WTC11_00061022	chr22	-	855	2	FSM	ENSG00000100294.13	ENST00000464244.1	549	2	-115	-191	3	-35	multi-exon	FALSE	canonical	3	142	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCGTTGAATTAAAGAG	-43141043	True	NA	-55	True	NA	NA	NA	43143395	43140864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43141250_43142925
WTC11_00061023	chr22	-	3386	14	FSM	ENSG00000100304.13	ENST00000216129.7	3386	14	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_3	104.078031718468	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCCTCCTTTCTCTT	-43172140	True	NA	-5	True	AATAAA	-16	NA	43187134	43166621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43168160_43168773_43168913_43169499_43169569_43171818_43171901_43172402_43172555_43173714_43173827_43174208_43174404_43174498_43174616_43176319_43176397_43179618_43179753_43179840_43180001_43180741_43180941_43182979_43183150_43186892
WTC11_00061024	chr22	-	2451	3	FSM	ENSG00000100304.13	ENST00000484711.1	2451	3	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_1	78	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGCCCTCCTTTCTCT	-43170253	False	NA	-6	True	AATAAA	-15	NA	43170274	43166622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43168160_43168773_43168913_43169499
WTC11_00061025	chr22	-	9795	22	FSM	ENSG00000159307.20	ENST00000360835.9	9795	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	10.1507905481708	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTCTTTTCTCTTATT	-43342961	True	NA	3	True	AATAAA	-18	NA	43343372	43197279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43204150_43207533_43207614_43208071_43208225_43210042_43210241_43210921_43211084_43212424_43212593_43214089_43214252_43218254_43218459_43220449_43220588_43221172_43221290_43222637_43222743_43223096_43223217_43227373_43227497_43229071_43229189_43231752_43231876_43238837_43238955_43258218_43258336_43262719_43262846_43291045_43291181_43319936_43320066_43339103_43339236_43343173
WTC11_00061026	chr22	-	2564	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	-3	0	2	multi-exon	FALSE	canonical	3	31	junction_7	13.5194493306525	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCGAGCGTTTCTGCTT	-43861796	True	NA	-6	True	AATAAA	-17	NA	43862470	43824506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
WTC11_00061027	chr22	-	535	3	FSM	ENSG00000130540.14	ENST00000475131.1	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCAGGCTTTGTGGGC	NA	False	NA	NA	False	AAAAAG	-2	NA	43838913	43828805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43829199_43833639_43833735_43838866
WTC11_00061028	chr22	-	2496	9	NIC	ENSG00000100341.13	novel	2540	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.8907931299791	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43889798_43889865_43891061_43891295_43891687
WTC11_00061029	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	11.8556128291858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
WTC11_00061030	chr22	-	4709	1	FSM	ENSG00000279933.1	ENST00000623969.1	4709	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACCGTGCTCCTGCAGC	NA	False	NA	NA	False	NA	NA	NA	44187739	44183030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_44183000_44187700
WTC11_00061031	chr22	-	6644	5	NNC	ENSG00000138944.8	novel	6853	5	NA	NA	12010	12001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.9474565306379	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	44300941	44231663	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44231693_44243665_44249686_44285427_44285746_44296671_44296886_44300878
WTC11_00061032	chr22	-	5428	2	FSM	ENSG00000188636.4	ENST00000341255.4	5419	2	0	-9	0	9	multi-exon	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTTTCTGGGTTTTTG	-44495896	True	NA	-8	True	ATTAAA	-32	NA	44498233	44492573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_44497812_44498043
WTC11_00061033	chr22	-	688	4	NNC	ENSG00000056487.16	novel	3586	14	NA	NA	72897	-567	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.2111075245674	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCATTTACTAGAATGAG	NA	False	NA	-14	True	ATTAAA	-13	NA	44896186	44890339	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44890741_44891305_44891361_44893456_44893534_44896031
WTC11_00061035	chr22	-	2999	2	NNC	ENSG00000056487.16	novel	749	2	NA	NA	-861	1736	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTCCATCTCAAAAAAA	-44972319	False	NA	NA	False	NA	NA	NA	44972331	44967251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44969206_44971286
WTC11_00061036	chr22	-	2401	4	NNC	ENSG00000056487.16	novel	575	2	NA	NA	2	1463	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	19.0262975904404	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCCGGGCACAGTGGC	-45006575	True	NA	-13	True	AATAAA	-23	NA	45010003	44967524	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44969206_44971286_44971433_45008544_45008611_45009495
WTC11_00061039	chr22	-	1425	4	Fusion	ENSG00000230922.1_ENSG00000056487.16	novel	1633	3	NA	NA	35	-1	multi-exon	FALSE	canonical	1	1	junction_2	24.2807651352991	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGGTAGTCCCATGA	-45006536	True	NA	NA	False	AATGAA	-14	NA	45009964	45000565	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_-_45001287_45001824_45001994_45008544_45008611_45009495
WTC11_00061041	chr22	-	690	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	6.5	361	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162604	True	NA	-3	True	ACTAAA	-17	NA	45163755	45134289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_45134798_45138823_45138917_45163666
WTC11_00061042	chr22	-	623	1	FSM	ENSG00000273243.1	ENST00000609432.1	473	1	-8	-142	-8	142	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTGAGGATGGTTCCA	-45154868	False	NA	NA	False	NA	NA	NA	45156019	45155396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_45155400_45156000
WTC11_00061043	chr22	-	6378	10	FSM	ENSG00000100364.19	ENST00000336156.10	6338	10	-31	-9	-31	9	multi-exon	FALSE	canonical	3	405	junction_4	19.0910747681336	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTTCTGTAATGGGA	-45238520	True	NA	-2	True	ATTAAA	-25	NA	45240925	45192234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639
WTC11_00061046	chr22	-	326	1	FSM	ENSG00000231711.2	ENST00000609737.1	4158	1	176	3656	176	-2554	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGGGATGGGCTGGTG	-46043817	False	NA	NA	False	GGGGCT	-13	NA	46043888	46043562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46043600_46043900
WTC11_00061047	chr22	-	1644	3	FSM	ENSG00000205643.11	ENST00000404583.5	1439	3	-205	0	-205	0	multi-exon	FALSE	canonical	3	12	junction_1	58	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGACTTTAAGATGCTCA	-46246991	False	NA	-10	True	AATAAA	-24	NA	46248490	46244010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46247124_46247222_46248171
WTC11_00061048	chr22	-	1510	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	-21	0	19	multi-exon	FALSE	canonical	3	75	junction_3	23.8932812499432	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTTAAAAGTTCCCGT	-46248794	True	NA	9	True	AATAAA	-43	NA	46250293	46243991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
WTC11_00061051	chr22	-	1523	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	-79	74	-79	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGCCAGCACCA	-46296685	True	NA	NA	False	NA	NA	NA	46296739	46295216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46295200_46296700
WTC11_00061052	chr22	-	11839	35	FSM	ENSG00000075275.18	ENST00000262738.9	11839	35	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_32	10.3994609921541	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTCATTCTTTTTT	-46537413	True	NA	NA	False	NA	NA	NA	46537620	46360833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46363188_46363995_46364252_46364511_46364737_46365230_46365381_46365585_46365690_46366385_46366481_46366992_46367119_46367728_46367856_46369178_46369259_46369691_46369805_46372882_46373058_46377060_46377262_46378590_46378718_46380787_46380956_46381845_46382051_46384542_46384687_46386401_46386586_46389289_46389500_46390391_46390487_46391185_46391288_46391632_46391817_46394141_46394263_46396604_46396747_46397673_46397849_46398523_46398638_46399716_46399903_46408995_46409163_46409754_46409881_46410397_46410562_46411601_46411760_46433392_46433482_46436173_46436290_46439188_46439412_46463706_46464346_46533626
WTC11_00061053	chr22	-	3610	5	FSM	ENSG00000075275.18	ENST00000473624.2	3610	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	8.27647267862342	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGTGCTGGTTTTT	NA	False	NA	0	True	AATAAA	-21	NA	46366438	46361173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46364252_46364511_46364737_46365230_46365381_46365585_46365690_46366385
WTC11_00061054	chr22	-	11559	35	FSM	ENSG00000075275.18	ENST00000674500.2	11559	35	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_32	10.3745179568677	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGTGCTGGTTTTT	-46537413	True	NA	0	True	AATAAA	-21	NA	46537620	46361173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46363248_46363995_46364252_46364511_46364737_46365230_46365381_46365585_46365690_46366385_46366481_46366992_46367119_46367728_46367856_46369178_46369259_46369691_46369805_46372882_46373058_46377060_46377262_46378590_46378718_46380787_46380956_46381845_46382051_46384542_46384687_46386401_46386586_46389289_46389500_46390391_46390487_46391185_46391288_46391632_46391817_46394141_46394263_46396604_46396747_46397673_46397849_46398523_46398638_46399716_46399903_46408995_46409163_46409754_46409881_46410397_46410562_46411601_46411760_46433392_46433482_46436173_46436290_46439188_46439412_46463706_46464346_46533626
WTC11_00061055	chr22	-	4444	13	FSM	ENSG00000100422.14	ENST00000216264.13	4442	13	0	-2	0	2	multi-exon	FALSE	canonical	3	193	junction_12	18.0462369115189	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGCTTTCTTTCCTTT	-46733742	True	NA	-3	True	AATAAA	-17	NA	46738252	46684407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
WTC11_00061056	chr22	-	653	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	17	0	17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	-46760937	True	NA	-8	True	AATAAA	-32	NA	46762546	46761893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46761900_46762500
WTC11_00061057	chr22	-	367	1	FSM	ENSG00000280080.2	ENST00000640274.1	1951	1	1867	-283	1733	283	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGCGGTAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	46914175	46913808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46913800_46914200
WTC11_00061058	chr22	-	4317	13	FSM	ENSG00000100425.19	ENST00000404034.5	4312	13	0	-5	0	5	multi-exon	FALSE	canonical	2	9	junction_12	40.8237233589599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATTTTATTCCTACAG	-49822597	False	NA	-5	True	AATAAA	-19	NA	49825900	49773277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787495_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49825729
WTC11_00061059	chr22	-	4555	13	FSM	ENSG00000100425.19	ENST00000404760.6	4911	13	361	-5	361	5	multi-exon	FALSE	canonical	3	19	junction_6	41.6342373800965	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATTTTATTCCTACAG	-49824209	False	NA	-5	True	AATAAA	-19	NA	49827512	49773277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787888_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
WTC11_00061060	chr22	-	4426	14	NNC	ENSG00000100425.19	novel	4312	13	NA	NA	270	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	51.0427364739153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGCCATTTTATTCC	-49824300	False	NA	-10	True	AATAAA	-14	NA	49827603	49773282	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787495_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49825729_49825908_49827496
WTC11_00061061	chr22	-	4573	13	NIC	ENSG00000100425.19	novel	4911	13	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_12	27.8521642885352	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGCCATTTTATTCC	-49824625	True	NA	-10	True	AATAAA	-14	NA	49827928	49773282	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787495_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
WTC11_00061062	chr22	-	5327	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	3	0	-3	multi-exon	FALSE	canonical	3	136	junction_3	24.6671671620896	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCCCCTCTTTCCTAGA	-49915651	True	NA	-19	True	GATAAA	-11	NA	49918438	49900231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
WTC11_00061064	chr22	-	772	1	FSM	ENSG00000273188.1	ENST00000607943.1	679	1	20	-113	20	113	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCACTGCCGGGTTCTGC	-50192154	False	NA	NA	False	GGGGCT	-20	NA	50192382	50191610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50191600_50192400
WTC11_00061065	chr22	-	4724	11	ISM	ENSG00000128159.12	ENST00000491449.5	4044	16	2390	-50	793	45	3prime_fragment	FALSE	canonical	3	170	junction_2	35.8470361396866	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGAACAATGACCACAGA	-50223788	False	NA	40	True	GGGGCT	-17	NA	50223799	50217643	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50221875_50222027_50222103_50222453
WTC11_00061067	chr22	-	4049	16	FSM	ENSG00000128159.12	ENST00000491449.5	4044	16	0	-5	0	0	multi-exon	FALSE	canonical	3	101	junction_13	56.0624255233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTCTCTCTCCTGG	-50226178	False	NA	-5	True	AATAAA	-18	NA	50226189	50217688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049
WTC11_00061068	chr22	-	6078	25	FSM	ENSG00000128159.12	ENST00000439308.6	6078	25	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	63.1371962915329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTCTCTCTCCTGG	-50242725	False	2246	-5	True	AATAAA	-18	NA	50244971	50217688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50220016_50220191_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049_50226190_50226286_50226379_50226732_50226843_50226998_50227078_50227906_50228029_50229403_50229578_50233315_50233527_50240203_50240368_50243718
WTC11_00061069	chr22	-	6071	25	FSM	ENSG00000128159.12	ENST00000248846.10	6066	25	0	-5	0	0	multi-exon	FALSE	canonical	3	75	junction_9	58.4009132348687	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTCTCTCTCCTGG	-50242777	False	2246	-5	True	AATAAA	-18	NA	50245023	50217688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50220016_50220250_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049_50226190_50226286_50226379_50226732_50226843_50226998_50227078_50227906_50228029_50229403_50229578_50233315_50233527_50240203_50240368_50243718
WTC11_00061072	chr22	-	2567	20	FSM	ENSG00000100429.18	ENST00000216271.10	2567	20	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_19	19.528798253319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-50249019	True	NA	0	True	AGTAAA	-17	NA	50251265	50245182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
WTC11_00061083	chr22	-	1787	12	FSM	ENSG00000188130.14	ENST00000488504.5	1785	12	0	-2	0	0	multi-exon	FALSE	canonical	3	27	junction_7	62.9217013109767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	-50261497	False	NA	-2	True	AATAGA	-19	NA	50261545	50252900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
WTC11_00061084	chr22	-	1778	12	FSM	ENSG00000188130.14	ENST00000215659.13	1778	12	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	29.3994996303066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	-50260651	True	NA	-2	True	AATAGA	-19	NA	50261683	50252900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
WTC11_00061085	chr22	-	2038	11	FSM	ENSG00000188130.14	ENST00000467891.5	2019	11	0	-19	0	0	multi-exon	FALSE	canonical	3	27	junction_7	65.9476307383366	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	-50260676	True	NA	-2	True	AATAGA	-19	NA	50261708	50252900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166
WTC11_00061086	chr22	-	1781	11	FSM	ENSG00000188130.14	ENST00000622558.4	1779	11	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_7	71.7822401433669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	-50260684	True	NA	-2	True	AATAGA	-19	NA	50261716	50252900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50257081_50257194_50258242_50258302_50261166_50261297_50261384
WTC11_00061087	chr22	-	1885	13	NNC	ENSG00000188130.14	novel	1778	12	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	85.4951265667621	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTGTGCGTCCTCA	-50261615	False	NA	-3	True	AATAGA	-18	NA	50261663	50252901	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50260828_50260957_50261166_50261297_50261384
WTC11_00061088	chr22	-	2763	4	FSM	ENSG00000188130.14	ENST00000496942.5	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	13.8884444373331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGGCCATAGGATCCT	-50256075	False	NA	-4	True	ATTAAA	-31	NA	50257107	50253780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50255371_50255452_50255532_50255614_50256200_50256598
WTC11_00061095	chr22	-	6559	37	NNC	ENSG00000196576.16	novel	6409	37	NA	NA	936	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_36	46.6113676989362	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGGGTTGGCTGAGT	-50300512	False	1746	-10	True	AATACA	-12	NA	50300526	50274984	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294718_50294779_50300276
WTC11_00061096	chr22	-	6581	38	NNC	ENSG00000196576.16	novel	6409	37	NA	NA	973	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_37	54.1841003204662	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTGGCTGAGTGTTCCT	-50300475	False	NA	-4	True	AATACA	-18	NA	50300489	50274978	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294718_50294779_50295376_50295430_50300276
WTC11_00061101	chr22	-	8017	41	FSM	ENSG00000100241.22	ENST00000380817.8	8019	41	2	0	0	0	multi-exon	TRUE	canonical	3	273	junction_22	48.1302334816693	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCTGGACCCTTCTA	-50472066	True	NA	NA	False	ATTAAA	-19	NA	50475033	50444999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
WTC11_00061107	chr22	-	1341	6	NIC	ENSG00000100258.18	novel	2593	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	14	junction_5	81.9429069535613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50502578	False	NA	-4	True	AATAAA	-20	NA	50505257	50502948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505228
WTC11_00061108	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	33.1885415458533	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50505023	True	NA	-4	True	AATAAA	-20	NA	50507702	50502948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
WTC11_00061109	chr22	-	2662	14	NNC	ENSG00000100258.18	novel	2593	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_13	58.7445578494134	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50505023	True	NA	-4	True	AATAAA	-20	NA	50507702	50502948	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507105_50507581
WTC11_00061113	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-50524282	True	NA	-4	True	ATTAAA	-15	NA	50525598	50523567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50524425_50525471
WTC11_00061114	chr22	-	788	5	NNC	ENSG00000025708.14	novel	866	6	NA	NA	-648	1	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_4	10.0093706095838	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCAGTGCTTGGGC	-50526930	True	NA	-2	True	AATAAA	-16	NA	50526985	50525753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50525919_50526000_50526142_50526245_50526477_50526575_50526739_50526897
WTC11_00061115	chr22	-	2647	19	FSM	ENSG00000205560.13	ENST00000405237.7	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_16	27.4896725838165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	-50577903	False	NA	-6	True	AATAAA	-21	NA	50578020	50568860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774
WTC11_00061116	chr22	-	4630	29	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	145	8	intron_retention	FALSE	canonical	3	63	junction_16	134.714868011164	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	-50580413	True	NA	-6	True	AATAAA	-21	NA	50582820	50568860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578548_50578660_50579035_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
WTC11_00061117	chr22	-	572	3	FSM	ENSG00000205560.13	ENST00000475238.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGCACGTCTCAGGATA	-50572983	False	NA	NA	False	NA	NA	NA	50573100	50571882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50572123_50572202_50572309_50572874
WTC11_00061125	chr22	-	1478	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	-4	0	0	multi-exon	FALSE	canonical	3	191	junction_10	105.324071322751	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-50580442	True	NA	33	True	AATAAA	-22	NA	50582849	50578958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
WTC11_00061126	chr22	-	2472	9	FSM	ENSG00000100288.20	ENST00000492582.5	2069	9	30	-433	0	433	multi-exon	FALSE	canonical	3	296	junction_8	73.1880070435041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTTTTTCCCCGACCCC	-50580417	True	NA	NA	False	NA	NA	NA	50582824	50578525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
WTC11_00061127	chr22	-	2121	8	FSM	ENSG00000100288.20	ENST00000479003.5	2114	8	0	-7	0	0	multi-exon	FALSE	canonical	3	296	junction_7	78.2408630643938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-50580413	True	NA	33	True	AATAAA	-22	NA	50582820	50578958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748
WTC11_00061132	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	17.0772554311641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-50627523	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
WTC11_00061133	chr22	-	1396	2	FSM	ENSG00000100299.18	ENST00000551731.1	1431	2	35	0	17	0	multi-exon	FALSE	canonical	3	70	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCCAGCAGGGCAGCTG	-50627506	True	NA	NA	False	GGGGCT	-40	NA	50628135	50626590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50627407_50627555
WTC11_00061135	chr22	-	2140	9	FSM	ENSG00000079974.19	ENST00000691320.1	2149	9	15	-6	9	1	multi-exon	FALSE	canonical	3	75	junction_8	40.1551677869736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTATGTGCTTTGTG	-50780278	True	NA	-24	True	AGTAAA	-23	NA	50783621	50767499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
WTC11_00061136	chr22	-	2144	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-6	9	1	multi-exon	FALSE	canonical	3	41	junction_8	49.9324543758866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTATGTGCTTTGTG	-50780278	True	NA	-24	True	AGTAAA	-23	NA	50783621	50767499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
WTC11_00061137	chr22	-	2407	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	-6	0	1	multi-exon	FALSE	canonical	3	26	junction_9	58.0880557621119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTATGTGCTTTGTG	-50780293	True	NA	-24	True	AGTAAA	-23	NA	50783636	50767499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
WTC11_00061143	chr22	+	763	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATACAATAA	17532635	False	NA	NA	False	NA	NA	NA	17532697	17533460	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_17532700_17533500
WTC11_00061144	chr22	+	327	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACTTTTAGAACATG	NA	False	NA	NA	False	NA	NA	NA	20695475	20695802	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_20695500_20695800
WTC11_00061145	chr22	+	464	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACAGTGCTTCTCCTCA	NA	False	NA	NA	False	TATAAA	-22	NA	21192796	21193260	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_21192800_21193300
WTC11_00061146	chr22	+	357	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCCATTAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-44	NA	22587182	22587539	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_22587200_22587500
WTC11_00061147	chr22	+	1292	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGACCTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	22637195	22638487	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_22637200_22638500
WTC11_00061148	chr22	+	256	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAACTGCAGGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	25178421	25178677	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_25178400_25178700
WTC11_00061149	chr22	+	1864	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACCATTCATGACACC	NA	False	NA	NA	False	NA	NA	NA	28909747	28911611	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_28909700_28911600
WTC11_00061150	chr22	+	2064	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTCCTAAAAAGACCAAC	NA	False	NA	NA	False	NA	NA	NA	29498933	29500997	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_29498900_29501000
WTC11_00061151	chr22	+	1416	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	807	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGATTGGTCTTC	NA	False	NA	NA	False	NA	NA	NA	35279135	35280551	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_35279100_35280600
WTC11_00061152	chr22	+	426	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGCCGAGAGCATAAAG	NA	False	NA	NA	False	NA	NA	NA	35838258	35838684	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_35838300_35838700
WTC11_00061153	chr22	+	278	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTCTATTTTTAGT	42656951	False	NA	NA	False	NA	NA	NA	42657003	42657281	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_42657000_42657300
WTC11_00061154	chr22	+	908	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGACTGAAAGATGA	NA	False	NA	NA	False	AATAAA	-38	NA	43644964	43645872	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_43645000_43645900
WTC11_00061155	chr22	+	224	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGTTACCCTTATAAC	44866686	False	NA	NA	False	NA	NA	NA	44866700	44866924	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_44866700_44866900
WTC11_00061156	chr22	+	4882	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAACCCAAGCAGGATAG	NA	False	NA	NA	False	NA	NA	NA	44981663	44986545	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_44981700_44986500
WTC11_00061161	chr22	+	4754	5	FSM	ENSG00000099968.18	ENST00000337612.9	4905	5	151	0	-6	0	multi-exon	FALSE	canonical	3	23	junction_3	103.448054597465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17634834	True	NA	NA	False	NA	NA	NA	17638734	17730855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17702242_17702387_17726676
WTC11_00061162	chr22	+	4911	6	FSM	ENSG00000099968.18	ENST00000418951.6	5062	6	151	0	-6	0	multi-exon	FALSE	canonical	3	29	junction_4	92.8891812860895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17634834	True	NA	NA	False	NA	NA	NA	17638734	17730855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242_17702387_17726676
WTC11_00061163	chr22	+	4458	5	FSM	ENSG00000099968.18	ENST00000355028.4	4458	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	111.388958160134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTTTCTCTTAATTT	17634910	True	NA	7	True	AATAAA	-19	NA	17638810	17730622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17726676
WTC11_00061176	chr22	+	2093	20	FSM	ENSG00000093009.11	ENST00000437685.6	2072	20	-21	0	-21	0	multi-exon	FALSE	canonical	2	3	junction_6	62.8090806286661	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCTCTGGTCTCGAG	NA	False	NA	24	True	AATAAA	-25	NA	19479804	19520611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494506_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
WTC11_00061177	chr22	+	3699	11	FSM	ENSG00000184702.20_ENSG00000203618.6	ENST00000383045.7	1588	11	26	-2137	0	-5	multi-exon	FALSE	canonical	3	25	junction_1	29.2726835121073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTCTCTGCACGAC	19718174	True	NA	-2	True	AATAAA	-10	NA	19718457	19724766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19718819_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427
WTC11_00061180	chr22	+	2219	7	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_5	22.7571722515977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	NA	False	NA	11	True	AATAAA	-23	NA	20036759	20065925	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20063337_20063443_20064541
WTC11_00061182	chr22	+	688	4	FSM	ENSG00000099901.17	ENST00000448394.2	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	2567.89567977794	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGATGGCAGGACTGTG	20122270	False	NA	16	True	AATAAA	-19	NA	20122606	20127353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20122698_20125307_20125437_20126302_20126369_20126951
WTC11_00061204	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	35205	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885158	True	NA	20	True	AATAAA	-19	NA	23894449	23895227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894583_23894771
WTC11_00061213	chr22	+	646	5	NNC	ENSG00000100028.12	novel	3466	4	NA	NA	12	38173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1062.09203932616	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATCTGTAAAATGAGTC	24522097	True	NA	NA	False	AAAAAG	-35	NA	24556018	24620225	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915_24572135_24620188
WTC11_00061222	chr22	+	10813	13	ISM	ENSG00000197077.14	ENST00000406486.8	7864	14	61699	-2991	-26152	0	3prime_fragment	FALSE	canonical	2	4	junction_1	10.6728497704326	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	25014416	False	NA	20	True	AATAAA	-27	NA	25014428	25197448	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_25014567_25025632_25025785_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
WTC11_00061230	chr22	+	10018	4	FSM	ENSG00000225783.9	ENST00000616469.4	10069	4	51	0	-1	0	multi-exon	FALSE	canonical	3	11	junction_2	20.4178571081514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	26654909	True	NA	15	True	ATTAAA	-17	NA	26657518	26676475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665456_26666938_26668157
WTC11_00061233	chr22	+	4803	4	FSM	ENSG00000235954.8	ENST00000453632.6	4790	4	-13	0	6	0	multi-exon	FALSE	canonical	3	10	junction_3	5.73488351136175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAACCCATATGGTTTT	27917897	True	NA	NA	False	NA	NA	NA	27919409	28002588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27998839_27999429
WTC11_00061235	chr22	+	1068	5	NIC	ENSG00000100209.11	novel	1106	6	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	61.9450361207417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGGCTTCTGGTAAT	28739576	True	NA	19	True	AATAAA	-30	NA	28742041	28757523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863_28746009_28757077
WTC11_00061239	chr22	+	2470	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	-24	0	-24	0	multi-exon	FALSE	canonical	2	29	junction_7	1520.85758735669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	29267965	False	NA	54	True	AATAAA	-24	NA	29267984	29300524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
WTC11_00061246	chr22	+	5965	21	NIC	ENSG00000100330.16	novel	8987	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_20	15.1390224255069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTAACACTTCCT	29880817	True	NA	28	True	AATAAA	-29	NA	29883212	30027858	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30023456_30023484_30025629
WTC11_00061249	chr22	+	3787	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	420	0	-420	multi-exon	FALSE	canonical	2	4	junction_2	5.44544695704434	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCATTCATTCGTTAATT	30396796	True	NA	NA	False	NA	NA	NA	30397017	30424883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
WTC11_00061261	chr22	+	4014	32	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	26.3572668364618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	31495046	True	NA	9	True	ATTAAA	-15	NA	31496440	31618548	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00061262	chr22	+	4096	33	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.1635399356902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTCCCACTTTTCA	31495030	True	NA	7	True	ATTAAA	-13	NA	31496424	31618546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508258_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00061263	chr22	+	3697	31	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	27.5963765737461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	31495188	True	NA	8	True	ATTAAA	-14	NA	31496582	31618547	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508254_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
WTC11_00061266	chr22	+	6281	42	FSM	ENSG00000100150.20	ENST00000642696.1	6479	42	10	188	-3	-188	multi-exon	FALSE	canonical	2	17	junction_25	42.1590428015919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGTTGATTTGCCTC	31751415	True	NA	NA	False	NA	NA	NA	31754010	31907845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
WTC11_00061267	chr22	+	5466	43	NIC	ENSG00000100150.20	novel	6554	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_25	42.0999310570853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTCCCCACCCAG	31751463	True	NA	4	True	AATAAA	-15	NA	31754058	31907012	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
WTC11_00061268	chr22	+	5350	42	FSM	ENSG00000100150.20	ENST00000400249.7	5350	42	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_32	41.3154173653873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATTTCTTTCCCCACC	31751537	True	NA	1	True	AATAAA	-12	NA	31754132	31907009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
WTC11_00061269	chr22	+	3986	10	NIC	ENSG00000100281.14	novel	4095	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	27.3739535568637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	35253716	True	NA	35	True	AATAAA	-45	NA	35257502	35295807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
WTC11_00061276	chr22	+	2824	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	65.2480543292289	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37608977	False	NA	17	True	AATAAA	-18	NA	37609060	37633564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
WTC11_00061279	chr22	+	7300	22	FSM	ENSG00000100106.22	ENST00000344404.10	7300	22	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	179.502790230905	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCAGGATTTTATATG	37697601	False	NA	0	True	NA	NA	NA	37697620	37774048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37697697_37701305_37701480_37710426_37710567_37715762_37715935_37723184_37726504_37733297_37733413_37734398_37735443_37738641_37738720_37740894_37741033_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
WTC11_00061281	chr22	+	1445	6	FSM	ENSG00000100129.18	ENST00000482600.5	1294	6	0	-151	0	0	multi-exon	FALSE	canonical	3	2309	junction_1	188.715235209031	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCTGGAGTGCAGTAG	37870100	False	NA	66	True	NA	NA	NA	37870164	37888782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
WTC11_00061297	chr22	+	18253	24	NIC	ENSG00000100354.21	novel	15958	24	NA	NA	2	106	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	21.9601804958477	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAATTCAACATTTG	40043650	True	NA	112	True	NA	NA	NA	40044818	40335914	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
WTC11_00061301	chr22	+	2729	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	70.6978783274293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGCACCTACCTGTC	40364522	True	NA	14	True	AATAAA	-14	NA	40370579	40410101	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_40370689_40400695_40400814_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
WTC11_00061305	chr22	+	1412	3	NNC	ENSG00000196236.13	novel	1418	3	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGTATTCACTGT	40853236	True	NA	18	True	ATTAAA	-15	NA	40857096	40862760	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_40857246_40860673_40860794_40861617
WTC11_00061306	chr22	+	1621	2	FSM	ENSG00000100387.9	ENST00000467617.1	1871	2	250	0	250	0	multi-exon	FALSE	canonical	3	3534	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGATGCTCTCTCTTGTG	40966436	False	NA	25	True	AATAAA	-18	NA	40966450	40972662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40967885_40972475
WTC11_00061308	chr22	+	2819	19	FSM	ENSG00000100412.17	ENST00000679320.1	2819	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	176.263025961169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGATTGGTGTCTGT	NA	False	NA	28	True	AAAACA	-25	NA	41469105	41528984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527138_41527203_41527287_41527421_41527900_41528023_41528478
WTC11_00061309	chr22	+	2835	18	FSM	ENSG00000100412.17	ENST00000396512.3	2811	18	-24	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	134.244522031633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTGGTGTCTGTGCCGT	NA	False	NA	33	True	AAAACA	-30	NA	41469105	41528989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515993_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00061310	chr22	+	3141	19	FSM	ENSG00000100412.17	ENST00000678688.1	3130	19	-11	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	171.8031819651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	41469105	41529267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517296_41517470_41517596_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00061315	chr22	+	1362	11	FSM	ENSG00000172250.17	ENST00000359906.7	1385	11	21	2	-5	0	multi-exon	FALSE	canonical	2	5	junction_7	3.55527776692624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTCG	42500419	True	NA	NA	False	AATAAA	-18	NA	42500573	42512560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502393_42502748_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
WTC11_00061318	chr22	+	3248	3	FSM	ENSG00000100347.15	ENST00000494795.1	3248	3	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	725.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43986330	False	NA	26	True	AATAAA	-17	NA	43986343	43996529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43989258_43990264_43990407_43996337
WTC11_00061319	chr22	+	2013	15	FSM	ENSG00000248405.10	ENST00000361473.9	2013	15	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	156.93830843061	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44701200	True	NA	-5	True	NA	NA	NA	44702232	44862671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
WTC11_00061320	chr22	+	2123	4	FSM	ENSG00000186654.21	ENST00000495017.5	2125	4	0	2	0	-1	multi-exon	FALSE	canonical	3	88	junction_2	17.3076733143296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATGTCTGCAGTGCCT	NA	False	NA	10	True	AATAAA	-13	NA	44730883	44737679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44731822_44732250_44732392_44735026_44735163_44736771
WTC11_00061329	chr22	+	572	3	FSM	ENSG00000077942.19	ENST00000439835.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	526.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCCAGCTGGAGGAGC	45502991	False	NA	NA	False	NA	NA	NA	45503045	45525563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503491_45518681_45518788_45525542
WTC11_00061335	chr22	+	3318	7	Fusion	ENSG00000100416.15_ENSG00000075218.19	novel	2983	12	NA	NA	66	0	multi-exon	FALSE	canonical	3	77	junction_6	54.0043722509782	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	46316092	False	NA	15	True	AATAAA	-16	NA	46316102	46333699	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046_46331733_46333081
WTC11_00061336	chr22	+	1584	11	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_4	105.407589859554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46329601	True	NA	11	True	AATAAA	-14	NA	46335718	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
WTC11_00061338	chr22	+	1452	10	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	149.2431109728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACACATAGTCTGATCG	46329628	True	NA	7	True	AATAAA	-10	NA	46335745	46357333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46355443_46355589_46355989_46356073_46356841
WTC11_00061339	chr22	+	2731	9	ISM	ENSG00000100416.15	ENST00000457572.5	1882	11	321	0	1	0	intron_retention	FALSE	canonical	3	136	junction_4	106.561015385553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46329628	True	NA	11	True	AATAAA	-14	NA	46335745	46357337	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
WTC11_00061341	chr22	+	1561	11	NNC	ENSG00000184164.15	novel	1577	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	202.758501671323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGGAGAACGGGCGTG	49913862	True	NA	29	True	AATAAA	-19	NA	49918641	49927528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922293_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
WTC11_00061344	chr22	+	3430	24	NIC	ENSG00000100239.16	novel	4094	24	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	49.8030146140802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGACGGCCCAGCTTGC	50337085	True	NA	37	True	AATAAA	-32	NA	50343335	50444390	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_50343551_50372019_50372151_50388985_50389112_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
WTC11_00061349	chr22	+	3084	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	-7	6	4	-6	multi-exon	FALSE	canonical	3	25	junction_1	123	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTGCTCAGACTCAG	50780525	True	NA	NA	False	ATTAAA	-14	NA	50783758	50801303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784073_50785172_50785294_50798654
WTC11_00061352	chr22	-	1992	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	-4	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.501118922629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17770908	True	NA	-6	True	AATAAA	-18	NA	17774495	17734137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
WTC11_00061355	chr22	-	2963	19	FSM	ENSG00000243156.9	ENST00000383094.7	2963	19	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	4.13394559384125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCATCTTCTAGTC	NA	False	NA	NA	False	NA	NA	NA	17906827	17841674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17842018_17864898_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17899447_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548
WTC11_00061358	chr22	-	4487	10	NNC	ENSG00000070413.20	novel	4484	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	154.24511517567	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTCCTTGGTGTGGC	-19119095	True	NA	0	True	AATAAA	-21	NA	19122454	19036279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065067_19068097_19068226_19089367_19089491_19122127
WTC11_00061363	chr22	-	906	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	322.149187125208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCTTTTAGTTACTG	-19466184	True	NA	-6	True	AATAAA	-16	NA	19479185	19450621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
WTC11_00061372	chr22	-	1788	14	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	18	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	73.853124670989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21517463	21472997	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21491993_21492095_21517324
WTC11_00061386	chr22	-	823	4	FSM	ENSG00000099977.15	ENST00000350608.7	671	4	-152	0	-152	0	multi-exon	FALSE	canonical	1	15	junction_3	517.742750365039	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTTCTATTATCT	NA	False	NA	-1	True	AATAAA	-29	NA	23979980	23971364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23971624_23973767_23973944_23974306_23974440_23979725
WTC11_00061389	chr22	-	2322	4	NIC	ENSG00000178026.13	novel	1828	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	53.2687108493866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	-24591707	True	NA	-31	True	NA	NA	NA	24593034	24585648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24586412_24588213_24588330_24588678_24589950_24592862
WTC11_00061397	chr22	-	3839	14	NIC	ENSG00000100099.21	novel	3786	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	38.4596922633825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481851	True	NA	-20	True	AATAAA	-36	NA	26483828	26452082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
WTC11_00061398	chr22	-	1756	2	FSM	ENSG00000100099.21	ENST00000481910.1	1914	2	0	158	0	-158	multi-exon	FALSE	canonical	3	156	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAATTAGCCAGGTGT	-26477434	False	NA	NA	False	ACTAAA	-2	NA	26479411	26475527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26477137_26479264
WTC11_00061408	chr22	-	1980	16	FSM	ENSG00000183765.23	ENST00000405598.5	1959	16	0	-21	0	2	multi-exon	FALSE	canonical	0	0	junction_14	316.890489321188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTCTGCTTGATAA	-28729552	True	NA	-16	True	ATTAAA	-20	NA	28741800	28687740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28737884_28738039_28741768
WTC11_00061410	chr22	-	1678	6	ISM	ENSG00000100263.14	ENST00000216085.12	1777	7	269	0	16	0	3prime_fragment	FALSE	canonical	3	199	junction_4	88.4660386815189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29267699	False	7234	-22	True	AATAAA	-19	NA	29267712	29259871	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425
WTC11_00061415	chr22	-	952	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	32	1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_6	76.3100401141437	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGCTGTGTTTCCCT	-29765682	True	NA	-22	True	TATAAA	-19	NA	29766975	29730954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
WTC11_00061416	chr22	-	1061	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	76.3100401141437	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGCTGTGTTTCCCT	-29765714	True	NA	-22	True	TATAAA	-19	NA	29767007	29730954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766871
WTC11_00061430	chr22	-	3342	4	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-228	18215	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.590525762262	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACTCAATGGAGAAAGG	-31346530	False	NA	NA	False	NA	NA	NA	31346574	31307588	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31307622_31340681_31341684_31342896_31342961_31344331
WTC11_00061435	chr22	-	3823	15	FSM	ENSG00000133424.22	ENST00000676370.1	3823	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	41.9163403917462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	-33922453	False	NA	-10	True	AATAAA	-26	NA	33922596	33273076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33922476
WTC11_00061438	chr22	-	1043	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	41	-502	4	-6	multi-exon	FALSE	canonical	1	4	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCAGTTTCTGCCTGGCA	-35622479	False	NA	-6	True	AATAAA	-13	NA	35622520	35606769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
WTC11_00061449	chr22	-	3933	9	FSM	ENSG00000100350.16	ENST00000216187.10	3933	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	17.2409396495667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAAGTATGCT	-36506977	False	NA	NA	False	AATAAA	-5	NA	36507022	36488241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36506911
WTC11_00061452	chr22	-	1013	6	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	117	junction_3	177.470448244208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772109	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36767305_36767366_36767782_36767863_36775673
WTC11_00061453	chr22	-	703	5	NIC	ENSG00000100362.13	novel	470	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	16.3305694940501	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCAGGCCTGGTCAGG	-36817465	True	NA	-3	True	AATAAA	-32	NA	36817514	36800685	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
WTC11_00061458	chr22	-	3061	16	FSM	ENSG00000184381.20	ENST00000335539.7	3060	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_15	18.0017283120878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-38180616	True	NA	0	True	AATAAA	-20	NA	38181754	38111494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
WTC11_00061459	chr22	-	3294	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	16.3037572356804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-38180687	True	NA	0	True	AATAAA	-20	NA	38181825	38111494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
WTC11_00061460	chr22	-	3165	17	FSM	ENSG00000184381.20	ENST00000663895.1	3171	17	6	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	16.1389232524974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-38180682	True	NA	0	True	AATAAA	-20	NA	38181820	38111494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169468_38181783
WTC11_00061461	chr22	-	3011	16	FSM	ENSG00000184381.20	ENST00000402064.5	3011	16	4	-4	0	0	multi-exon	FALSE	canonical	2	10	junction_8	16.3837317686377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTGTGTGTGCAGT	-38180687	True	NA	-1	True	AATAAA	-19	NA	38181825	38111495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
WTC11_00061464	chr22	-	2615	11	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	2817	11	NA	NA	8238	0	multi-exon	FALSE	canonical	3	80	junction_10	293.8047140534	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCAGCCCTTTGTCCA	-38334634	True	NA	-8	True	AATAAA	-19	NA	38336196	38290690	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
WTC11_00061465	chr22	-	694	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	1	-2414	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	46.4831958884068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGCAAAGGGGTGTTTG	-38396815	True	NA	NA	False	AATAAA	-33	NA	38398859	38352790	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38353135_38361398_38361561_38380369_38380424_38380936_38380991_38398779
WTC11_00061466	chr22	-	2887	5	FSM	ENSG00000244627.5	ENST00000455209.5	792	5	1	-2096	0	2096	multi-exon	FALSE	canonical	2	15	junction_1	51.3438165702551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGCAACCTGCCTTT	-38396876	True	NA	NA	False	AATAAA	-25	NA	38398920	38366801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38369380_38369985_38370046_38380369_38380424_38380936_38380991_38398779
WTC11_00061467	chr22	-	990	4	NNC	ENSG00000244627.5	novel	468	3	NA	NA	7	1918	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	49.8263651761461	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTATATTTTGCAATT	-38396809	True	NA	NA	False	ATTAAA	-26	NA	38398853	38366979	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38367788_38380369_38380424_38380936_38380991_38398779
WTC11_00061473	chr22	-	2486	19	NIC	ENSG00000100242.16	novel	4055	19	NA	NA	-29	-351	combination_of_known_junctions	TRUE	canonical	3	17	junction_18	19.144109109077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGCTTCAGAGTGCATG	-38754601	True	NA	NA	False	NA	NA	NA	38756029	38736303	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38754641_38754707_38755762
WTC11_00061474	chr22	-	5810	5	NNC	ENSG00000221890.6	novel	5830	5	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	9.60468635614927	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGGCTCTTCTTTGCA	-38843783	True	NA	-7	True	AATAAA	-12	NA	38844017	38818457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38822834_38823082_38823263_38826499_38826748_38828286_38828510_38843234
WTC11_00061476	chr22	-	3968	6	NIC	ENSG00000100307.13	novel	4111	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	6.82934843158555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCATTTGATTATT	-39152321	True	NA	NA	False	ATTAAA	-33	NA	39152540	39130771	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_39134046_39134400_39134753_39138635_39138703_39141370_39141437_39149788_39149833_39152375
WTC11_00061477	chr22	-	4111	6	FSM	ENSG00000100307.13	ENST00000216133.10	4111	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	4.58693797647189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCATTTGATTATT	-39152613	False	NA	NA	False	ATTAAA	-33	NA	39152680	39130771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39134049_39134400_39134753_39138635_39138703_39141370_39141437_39149788_39149833_39152375
WTC11_00061478	chr22	-	3857	6	FSM	ENSG00000100307.13	ENST00000401405.7	784	6	-261	-2812	-25	0	multi-exon	TRUE	canonical	2	7	junction_2	6.11228271597445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCATTTGATTATT	-39152638	False	NA	NA	False	ATTAAA	-33	NA	39152705	39130771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39134049_39134400_39134474_39138635_39138703_39141370_39141437_39149788_39149833_39152375
WTC11_00061479	chr22	-	525	2	FSM	ENSG00000100316.16	ENST00000473638.5	523	2	0	-2	0	0	multi-exon	FALSE	canonical	3	38849	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-39313421	False	NA	-1	True	AATAAA	-19	NA	39313729	39312881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39313311_39313633
WTC11_00061481	chr22	-	1270	10	NNC	ENSG00000100316.16	novel	1296	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	3280	junction_9	10826.326965114	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-38740323	True	NA	-1	True	AATAAA	-19	NA	39319623	39312881	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318567_39319594
WTC11_00061488	chr22	-	1151	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	-126	-733	0	18	multi-exon	FALSE	canonical	2	11	junction_3	332.808586961868	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACTCTAGGAATTTAT	-41452974	True	NA	-4	True	AATAAA	-40	NA	41468625	41459698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
WTC11_00061502	chr22	-	3389	9	NNC	ENSG00000100227.19	novel	3323	8	NA	NA	-7	61946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.880069281638	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGCCTGTAATCCCA	-42603104	True	NA	NA	False	NA	NA	NA	42614969	42521774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42521803_42583720_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
WTC11_00061503	chr22	-	1971	10	NNC	ENSG00000100243.22	novel	3048	10	NA	NA	0	93955	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	542.594794585343	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGCCTGTAATCCCA	-42639713	True	NA	NA	False	NA	NA	NA	42649392	42521774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42521803_42618812_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
WTC11_00061506	chr22	-	1496	9	NNC	ENSG00000182841.13	novel	2387	8	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	338.731064968951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACCTGCCACAACTCT	-42578403	True	NA	NA	False	AATACA	-9	NA	42582011	42555352	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42555803_42556524_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
WTC11_00061511	chr22	-	3422	15	NNC	ENSG00000100304.13	novel	3386	14	NA	NA	0	36205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	459.049772767127	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAAAGGGCCAGACCTT	-43172140	True	NA	NA	False	ATTAAA	-36	NA	43187134	43130416	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_43130453_43166621_43168160_43168773_43168913_43169499_43169569_43171818_43171901_43172402_43172555_43173714_43173827_43174208_43174404_43174498_43174616_43176319_43176397_43179618_43179753_43179840_43180001_43180741_43180941_43182979_43183150_43186892
WTC11_00061517	chr22	-	2480	7	FSM	ENSG00000130540.14	ENST00000330884.9	2478	7	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	23.3452350598575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCGAGCGTTTCTGCTT	-43861839	True	NA	-6	True	AATAAA	-17	NA	43862513	43824506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43826114_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
WTC11_00061525	chr22	-	5831	24	NIC	ENSG00000128159.12	novel	6066	25	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	70.2572373146359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGCAGCTCTCTCT	-50242757	False	2246	-10	True	AATAAA	-13	NA	50245003	50217693	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50220016_50220250_50221875_50222027_50222103_50222453_50222589_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049_50226190_50226286_50226379_50226732_50226843_50226998_50227078_50227906_50228029_50229403_50229578_50240203_50240368_50243718
WTC11_00061526	chr22	-	2559	20	NIC	ENSG00000100429.18	novel	2567	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_19	19.7019340417673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-50249139	True	NA	0	True	AGTAAA	-17	NA	50251385	50245182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50251101
WTC11_00061529	chr22	-	6435	38	NNC	ENSG00000196576.16	novel	6409	37	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_37	54.1841003204662	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGTTGGCTGAGTGTTC	-50305875	True	NA	-6	True	AATACA	-16	NA	50307621	50274980	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294718_50294779_50295376_50295430_50307552
WTC11_00061530	chr22	-	6550	38	NNC	ENSG00000196576.16	novel	6383	37	NA	NA	990	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_37	59.665453981607	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGCGGGTTGGCTGAG	-50300458	False	NA	-11	True	AATACA	-11	NA	50300472	50274985	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294725_50294779_50295376_50295430_50300276
WTC11_00061531	chr22	-	6424	36	NIC	ENSG00000196576.16	novel	6409	37	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_35	45.3122139681331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGGGTTGGCTGAGT	-50307693	False	NA	-10	True	AATACA	-12	NA	50307727	50274984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50307552
WTC11_00061535	chr22	-	3130	13	ISM	ENSG00000100258.18	ENST00000474879.7	2593	14	4	5	4	-3	intron_retention	FALSE	canonical	2	129	junction_12	34.5036229981722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTGCCTGGTGCT	-50505019	True	NA	-9	True	AATAAA	-15	NA	50507698	50502953	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781
WTC11_00061536	chr22	-	2568	14	NNC	ENSG00000100258.18	novel	2593	14	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	62.566698138677	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTGCCTGGTGCT	-50505020	True	NA	-9	True	AATAAA	-15	NA	50507699	50502953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505318_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
WTC11_00061541	chr22	-	4451	29	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	145	-89	intron_retention	FALSE	canonical	3	63	junction_15	131.536620958048	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTAGGTACCTGTGTT	-50580413	True	NA	NA	False	AATAAA	-25	NA	50582820	50569083	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578548_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
WTC11_00061542	chr22	-	2958	7	NIC	ENSG00000100288.20	novel	1401	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_3	150.248405426924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGTCCTGGCCCTGC	-50580417	True	NA	26	True	AATAAA	-15	NA	50582824	50578965	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189_50580272_50580357_50580417_50580564
WTC11_00061544	chr22	-	3607	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	19	-1731	1	-533	multi-exon	FALSE	canonical	2	13	junction_8	16.9036793332103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCAACGCTCTGCCTCC	-50627522	True	NA	NA	False	NA	NA	NA	50628151	50623286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
WTC11_00061546	chr22	-	2281	10	NIC	ENSG00000079974.19	novel	2536	11	NA	NA	-12	0	intron_retention	FALSE	canonical	2	8	junction_8	73.0494505264908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTGAGTAAATGTATG	-50780269	True	NA	-33	True	AGTAAA	-14	NA	50783612	50767508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
WTC11_00061547	chr22	-	2346	10	NIC	ENSG00000079974.19	novel	2401	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	26	junction_8	65.9107140169352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACATTGAGTAAATGTA	-50780249	True	NA	-35	True	AGTAAA	-12	NA	50783592	50767510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783044_50783287_50783500
WTC11_00061556	chr22	+	13818	18	NIC	ENSG00000099954.19	novel	10030	19	NA	NA	27	3902	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	7.41269835389335	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACAAGAAACATCTAT	17359609	True	NA	NA	False	AATAAA	-24	NA	17369486	17562053	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_17369910_17477587_17477683_17497402_17497587_17499409_17499550_17500630_17500736_17503081_17503132_17504846_17505017_17524117_17524272_17537102_17537233_17538519_17538558_17538639_17538732_17538992_17539120_17540411_17540801_17541838_17541968_17542156_17543004_17548150_17549565_17552030_17552143_17552834
WTC11_00061559	chr22	+	524	2	FSM	ENSG00000183628.14	ENST00000477156.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTGGGACACTGGAGG	18906190	False	NA	NA	False	GGGGCT	-24	NA	18906780	18910389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18907087_18910171
WTC11_00061560	chr22	+	1200	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3099	-9	64	9	3prime_fragment	FALSE	canonical	3	36	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTATACTTTGTCTCTG	18939497	False	NA	9	True	NA	NA	NA	18939509	18947750	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_18939750_18946790
WTC11_00061562	chr22	+	736	8	FSM	ENSG00000093009.11	ENST00000487669.5	736	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	89.1078227858399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTACGTAGCCCCTGCGG	19475115	False	NA	NA	False	NA	NA	NA	19480149	19497444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494473_19494603_19495980_19496030_19497385
WTC11_00061563	chr22	+	577	8	FSM	ENSG00000093009.11	ENST00000428937.1	577	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	87.4257702632493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACTGATGTTGGTGTCC	19482733	True	NA	NA	False	AATGAA	-4	NA	19482750	19505370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19482828_19483861_19484006_19494326_19494383_19494473_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361
WTC11_00061567	chr22	+	2075	7	FSM	ENSG00000183597.16	ENST00000447208.6	2086	7	11	0	8	0	multi-exon	FALSE	canonical	1	1	junction_5	31.1434851400203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020169	True	NA	11	True	AATAAA	-23	NA	20021079	20065925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20063337_20063443_20064541
WTC11_00061569	chr22	+	4535	14	NNC	ENSG00000128191.16	novel	4506	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	9	junction_4	33.9852038811044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	20077830	True	NA	11	True	CATAAA	-16	NA	20080243	20111872	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089844_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
WTC11_00061573	chr22	+	501	4	FSM	ENSG00000099917.17	ENST00000444094.5	551	4	50	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_2	147.815951627541	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCAGTTCCAGCAGCA	20500595	True	NA	NA	False	NA	NA	NA	20507590	20564493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537205_20554935_20555149_20564449
WTC11_00061574	chr22	+	3307	18	NNC	ENSG00000099917.17	novel	3351	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	4	junction_9	87.5415867560367	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	20500608	True	NA	10	True	AATAAA	-16	NA	20507603	20587617	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582658_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00061575	chr22	+	3193	16	NIC	ENSG00000099917.17	novel	3351	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_3	78.6004240870663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	20500622	True	NA	12	True	AATAAA	-18	NA	20507617	20587619	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20507747_20537116_20537205_20551435_20551488_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00061576	chr22	+	3301	17	NIC	ENSG00000099917.17	novel	3351	18	NA	NA	-11	0	intron_retention	FALSE	canonical	2	6	junction_3	99.7552473557156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	20500634	True	NA	12	True	AATAAA	-18	NA	20507629	20587619	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20507747_20537116_20537205_20551435_20551488_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
WTC11_00061582	chr22	+	6850	2	FSM	ENSG00000169635.10	ENST00000443632.2	6940	2	90	0	90	0	multi-exon	FALSE	canonical	3	25	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	NA	False	NA	20	True	ATTAAA	-15	NA	21442549	21451463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21442858_21444921
WTC11_00061600	chr22	+	985	5	FSM	ENSG00000100031.19	ENST00000403838.5	1033	5	48	0	48	0	multi-exon	FALSE	canonical	3	168	junction_1	15.0499169432924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTCAGTGTATTGT	24627292	False	NA	34	True	NA	NA	NA	24627302	24629005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
WTC11_00061603	chr22	+	4317	26	FSM	ENSG00000167037.19	ENST00000400359.4	4317	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	5.92297222684692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTCAGGAGTTTTGAG	24805738	True	NA	NA	False	NA	NA	NA	24806318	24925137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24806345_24806440_24806485_24844896_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375_24868540_24868722_24868856_24874414_24874580_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24893430_24893614_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
WTC11_00061606	chr22	+	2592	3	NIC	ENSG00000100058.13	novel	724	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	22	junction_1	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCATTGATTCTTC	25445997	True	NA	22	True	AATAAA	-14	NA	25448088	25461668	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_25448285_25457258_25457402_25459415
WTC11_00061608	chr22	+	4442	22	NNC	ENSG00000100077.16	novel	9277	21	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	16.3820597632339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATATCGACTTCCGT	25564159	True	NA	9	True	AATAAA	-11	NA	25564670	25729287	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288_25723273_25728104
WTC11_00061613	chr22	+	526	4	FSM	ENSG00000235954.8	ENST00000430853.5	564	4	38	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_3	10.4029910228848	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGGAGTGTGCTGCTG	27917901	True	NA	NA	False	NA	NA	NA	27919413	27993292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27989881_27990027_27993123
WTC11_00061614	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	12	junction_3	68.3585319392458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	27918005	True	NA	NA	False	NA	NA	NA	27919517	27986229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
WTC11_00061616	chr22	+	6834	4	FSM	ENSG00000235954.8	ENST00000655196.1	6834	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.64279609239471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAACCCATATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	27991469	28002588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27993536_27994472_27994654_27997410_27998839_27999429
WTC11_00061618	chr22	+	716	5	NIC	ENSG00000100209.11	novel	846	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	68.2715167547931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28742245	True	NA	6	True	AATAAA	-17	NA	28742680	28757510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_28742729_28743881_28743979_28744614_28744705_28751240_28751289_28757077
WTC11_00061622	chr22	+	790	8	FSM	ENSG00000186998.16	ENST00000488820.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	7.49149177264394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGTGTAGGGTGCTGGG	NA	False	NA	NA	False	NA	NA	NA	29232335	29255612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29255270
WTC11_00061624	chr22	+	2351	17	NNC	ENSG00000182944.18	novel	2400	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	1205.46489994525	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216239	True	NA	51	True	AATAAA	-21	NA	29268312	29300521	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299851_29300121
WTC11_00061634	chr22	+	1806	2	ISM	ENSG00000184792.16	ENST00000454145.5	589	5	4378	1149	-1367	977	internal_fragment	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCCAGCACTTTGGGA	NA	False	NA	NA	False	TTTAAA	-22	NA	30886058	30888468	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_30887619_30888222
WTC11_00061637	chr22	+	2986	4	NIC	ENSG00000138942.17	novel	2946	5	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	1	junction_2	67.6773390598524	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTATGAGCTTGGACT	31157782	True	NA	-5	True	ATTAAA	-13	NA	31160179	31207008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31160304_31187046_31187271_31201497_31201616_31204488
WTC11_00061649	chr22	+	2258	15	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	54.4313835044093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTCAAGTCTCCTGG	35295987	True	NA	23	True	ATTAAA	-23	NA	35299905	35347983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35299981_35317876_35317962_35321958_35322020_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
WTC11_00061654	chr22	+	2588	7	ISM	ENSG00000100379.18	ENST00000402077.8	1691	8	-18	16	-18	0	intron_retention	FALSE	canonical	3	57	junction_6	26.8416136292553	2564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	37049479	True	NA	12	True	AATAAA	-3	NA	37051720	37063374	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538
WTC11_00061657	chr22	+	1846	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-3	-56	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	34.074719444044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTGCCGACATGTTT	37636478	True	NA	-40	True	NA	NA	NA	37639691	37655982	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
WTC11_00061659	chr22	+	1528	7	NNC	ENSG00000273899.5	novel	903	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	99.6404647832507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37682791	True	NA	20	True	ATTAAA	-14	NA	37686336	37693471	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37692027_37693331
WTC11_00061660	chr22	+	1305	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	231	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.436489348476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCATGTGTGCCTTCA	37683045	False	NA	19	True	ATTAAA	-13	NA	37686590	37693470	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37687110_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
WTC11_00061669	chr22	+	1308	6	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	140.020569917423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38653020	True	NA	10	True	ATTAAA	-10	NA	38656659	38673846	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883_38670990_38671069_38671189_38673158
WTC11_00061673	chr22	+	2721	2	FSM	ENSG00000100226.16	ENST00000462332.1	3035	2	314	0	314	0	multi-exon	FALSE	canonical	3	274	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGGTGCTCCCTGCC	38728535	False	NA	17	True	AATAAA	-17	NA	38728569	38732239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38729663_38730611
WTC11_00061685	chr22	+	2149	13	FSM	ENSG00000239900.14	ENST00000480775.3	2135	13	-14	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	459.992028916444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAAGTGATGAAGTTTG	40335240	True	NA	NA	False	NA	NA	NA	40346499	40366941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361087_40361343_40361487_40361667_40362980_40363072_40364275_40364366_40364879_40365057_40366435
WTC11_00061686	chr22	+	2748	11	FSM	ENSG00000196236.13	ENST00000428799.1	2737	11	-11	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	20.3629565633284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATCTTTTCTCTTC	40853259	True	NA	5	True	AATAAA	-18	NA	40857119	40927505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40857246_40868998_40869116_40870047_40870140_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
WTC11_00061687	chr22	+	5152	13	NNC	ENSG00000196236.13	novel	7938	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	22.3026841932137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	40853287	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268_40927243_40929403_40930175_40930426_40931093_40931465
WTC11_00061690	chr22	+	2859	14	NIC	ENSG00000100395.15	novel	3189	17	NA	NA	4093	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	62.0816412276189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCCGTTTGTTAGATC	41211238	False	NA	9	True	ATTAAA	-14	NA	41213788	41231268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_41214027_41216138_41216263_41217122_41217203_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
WTC11_00061692	chr22	+	3711	19	FSM	ENSG00000100412.17	ENST00000678394.1	3712	19	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	207.334107417871	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	41467119	True	NA	NA	False	NA	NA	NA	41469112	41529267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41502629_41502772_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41517942_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00061693	chr22	+	3179	19	FSM	ENSG00000100412.17	ENST00000678819.1	3164	19	-15	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	175.819316625806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	41467119	True	NA	NA	False	NA	NA	NA	41469112	41529273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41502629_41502772_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
WTC11_00061698	chr22	+	1655	10	FSM	ENSG00000172250.17	ENST00000455578.5	1712	10	57	0	-35	0	multi-exon	FALSE	canonical	2	5	junction_6	3.74495545474505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTTGAGGCTTTTTC	42500481	True	NA	NA	False	AATAAA	-17	NA	42500635	42512559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
WTC11_00061705	chr22	+	2601	8	ISM	ENSG00000100416.15	ENST00000453630.5	1775	10	345	-1	25	0	intron_retention	FALSE	canonical	3	136	junction_3	121.905115326869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	46329652	True	NA	12	True	AATAAA	-15	NA	46335769	46357338	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
WTC11_00061709	chr22	+	2224	9	NNC	ENSG00000073169.15	novel	2283	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	77.6787253693056	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTCTGTGGTCATT	50198838	True	NA	8	True	AATAAA	-16	NA	50201010	50217615	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50201591_50206316_50206463_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
WTC11_00061710	chr22	+	2257	9	NNC	ENSG00000073169.15	novel	2283	9	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	85.2304779700314	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCTGTCTCTGTGGT	50198855	True	NA	4	True	AATAAA	-12	NA	50201027	50217611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50201591_50206320_50206521_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
WTC11_00061711	chr22	+	2029	21	NNC	ENSG00000025770.19	novel	3337	20	NA	NA	0	90163	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	63.0753517627924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTTTGCTGAAGTT	50507492	True	NA	NA	False	NA	NA	NA	50508259	50614943	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234_50523472_50614906
WTC11_00061719	chr22	-	2638	6	FSM	ENSG00000100033.17	ENST00000313755.9	2961	6	324	-1	289	0	multi-exon	TRUE	canonical	0	0	junction_2	167.228466476255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18921225	False	NA	NA	False	AATAAA	-15	NA	18921250	18912780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705
WTC11_00061722	chr22	-	3106	13	FSM	ENSG00000100033.17	ENST00000491604.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.43028337661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18936271	True	NA	NA	False	AATAAA	-15	NA	18936295	18912780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
WTC11_00061728	chr22	-	4123	27	NNC	ENSG00000100084.14	novel	4053	25	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_24	101.086816047881	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	-19431900	False	NA	-2	True	AATAAA	-23	NA	19431915	19330697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405462_19405532_19405785_19405881_19407183_19407275_19408273_19408408_19408482_19408594_19410715_19410779_19431754
WTC11_00061729	chr22	-	1757	12	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_10	278.518572165883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466184	True	NA	-18	True	ATTAAA	-14	NA	19479185	19449910	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
WTC11_00061731	chr22	-	1326	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	60.0872051457065	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGAGGTGGGAGCT	-19851260	True	NA	-6	True	AATAAA	-17	NA	19854873	19788411	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
WTC11_00061732	chr22	-	1185	6	NIC	ENSG00000185838.14	novel	1197	6	NA	NA	7	-64	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	68.3473481563111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTCTGGGGGCCAGCC	-19851223	True	NA	-122	True	NA	NA	NA	19854836	19788527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854659
WTC11_00061738	chr22	-	739	4	FSM	ENSG00000099899.15	ENST00000444845.5	739	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	98.8545508422461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTCTGTGATGAGAG	-20111311	False	NA	NA	False	AATAAA	-16	NA	20113507	20112300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112955_20113008_20113117_20113235_20113431
WTC11_00061739	chr22	-	2980	10	NNC	ENSG00000244486.9	novel	3463	11	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	39.8803766838334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATCACTTCCTGTT	-20436221	False	NA	-1	True	AATAAA	-16	NA	20437733	20424583	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_20426283_20427397_20427551_20429224_20429356_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431744_20431847_20431929_20432103_20437581
WTC11_00061743	chr22	-	1181	4	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	105.994758780276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGTTTATCAGCTGT	-21626858	True	NA	-3	True	AATAAA	-21	NA	21630012	21628087	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21628788_21629307_21629408_21629542_21629762_21629850
WTC11_00061745	chr22	-	3205	20	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_18	63.9631992533657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977847	True	NA	NA	False	ATTAAA	-22	NA	21982793	21957024	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975904_21976188_21982729
WTC11_00061748	chr22	-	759	6	ISM	ENSG00000099958.15	ENST00000406855.7	1063	7	17	405	15	-405	intron_retention	FALSE	canonical	3	63	junction_1	30.216551755619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGTAGCCTGACCAT	-23838485	True	NA	NA	False	NA	NA	NA	23838989	23834907	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
WTC11_00061750	chr22	-	459	4	FSM	ENSG00000099958.15	ENST00000488272.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.8231333966683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23837699	False	NA	-15	True	AATAAA	-15	NA	23838203	23836733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23836963_23837063_23837155_23837658_23837732_23838137
WTC11_00061752	chr22	-	2132	6	NIC	ENSG00000178026.13	novel	1417	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	47.6109231164446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	-24591737	True	NA	-31	True	NA	NA	NA	24593064	24585648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24586412_24588213_24588330_24588678_24589394_24589820_24589950_24592216_24592424_24592862
WTC11_00061762	chr22	-	2562	16	FSM	ENSG00000183765.23	ENST00000416671.5	2560	16	0	-2	0	2	multi-exon	FALSE	canonical	2	3	junction_12	316.668112277402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTCTGCTTGATAA	-28742350	True	NA	-16	True	ATTAAA	-20	NA	28742422	28687740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28721517_28721632_28724976_28725125_28725242_28725368_28734402_28734728_28741768
WTC11_00061768	chr22	-	2618	19	NIC	ENSG00000100325.15	novel	2790	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	88.5108105275673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTGTATGTCCATGAC	-29835443	True	NA	-17	True	AATAAA	-20	NA	29838260	29788609	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29832244_29832343_29838177
WTC11_00061772	chr22	-	1507	9	NIC	ENSG00000239282.8	novel	1501	9	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	35.3013809928167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATTGACTTGTTAAT	-30288398	True	NA	-40	True	NA	NA	NA	30289546	30285154	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286952_30287154_30287288_30287372_30287561_30288705_30288777_30289384
WTC11_00061776	chr22	-	2224	15	NIC	ENSG00000100029.18	novel	2265	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_2	182.028717738803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTGTGTCCATGAG	-30581673	True	NA	-6	True	ATTAAA	-21	NA	30591877	30576629	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_30577130_30578836_30578996_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
WTC11_00061778	chr22	-	1160	8	NNC	ENSG00000198832.11	novel	1054	7	NA	NA	-7392	-2	intron_retention	FALSE	canonical	1	1	junction_6	139.015782395748	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGACTCCTTCGTTGC	-31127448	False	NA	-2	True	ACTAAA	-20	NA	31127461	31104773	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376_31107887_31108054_31108104_31119882_31119947_31127429
WTC11_00061781	chr22	-	3656	19	NIC	ENSG00000184708.18	novel	3695	19	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	48.7999190446606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31489520	False	NA	15	True	ATTAAA	-28	NA	31489545	31439366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447569_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489390
WTC11_00061782	chr22	-	3478	19	NIC	ENSG00000184708.18	novel	3647	19	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	45.5872856977025	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31488210	True	NA	15	True	ATTAAA	-28	NA	31489796	31439366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449409_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
WTC11_00061789	chr22	-	3719	14	NIC	ENSG00000133424.22	novel	4193	16	NA	NA	321	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	40.5545873633676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	-33919950	False	NA	-10	True	AATAAA	-26	NA	33920093	33273076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33650366_33650669_33761370_33761559_33919994
WTC11_00061792	chr22	-	644	2	NNC	ENSG00000100320.23	novel	6932	12	NA	NA	0	-60225	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTATTTTTTAAAAAAA	NA	False	NA	NA	False	ATTAAA	-23	NA	35840403	35838252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_35838685_35840191
WTC11_00061801	chr22	-	1369	8	FSM	ENSG00000198792.13	ENST00000633438.1	1369	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	179.953735551045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGACCAGCGGCTGCAGC	-38245971	False	121	NA	False	NA	NA	NA	38246092	38221144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38221711_38222641_38222663_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934
WTC11_00061803	chr22	-	3539	4	NIC	ENSG00000244627.5	novel	792	5	NA	NA	-2	2131	intron_retention	FALSE	canonical	3	32	junction_1	44.2116123509047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCTTGAATCCTAGTGT	-38396887	True	NA	NA	False	AAGAAA	-30	NA	38398931	38366766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38370046_38380369_38380424_38380936_38380991_38398779
WTC11_00061804	chr22	-	427	2	FSM	ENSG00000100201.23	ENST00000479734.1	441	2	0	14	0	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTTGGGAGGCCGA	-38450302	True	NA	NA	False	NA	NA	NA	38506306	38505178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38505250_38505950
WTC11_00061815	chr22	-	4607	2	NNC	ENSG00000183864.5	novel	4337	2	NA	NA	1983	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCTCCTGGCTT	-41444774	False	NA	-5	True	ATTAAA	-19	NA	41444802	41433491	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_41437408_41444111
WTC11_00061820	chr22	-	8349	6	FSM	ENSG00000100207.21	ENST00000683686.1	8573	6	224	0	224	0	multi-exon	FALSE	canonical	1	2	junction_5	45.8929188437606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAATCAAAAAAATAA	-42269361	False	NA	-57	True	TTTAAA	-21	NA	42269392	42160052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42161359_42168608_42168737_42169846_42169897_42179608_42179703_42209650_42215342_42268312
WTC11_00061822	chr22	-	3360	10	NNC	ENSG00000100227.19	novel	3362	9	NA	NA	0	20538	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.500502439773	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCAGGGTCTTGCT	-42602995	True	NA	NA	False	AAAAAG	-8	NA	42614860	42563182	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42563204_42583720_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
WTC11_00061825	chr22	-	3092	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_9	128.801982194701	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007286	True	NA	-18	True	AATAAA	-17	NA	43015127	42869772	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
WTC11_00061827	chr22	-	5367	6	NIC	ENSG00000130540.14	novel	2478	7	NA	NA	14	0	intron_retention	FALSE	canonical	3	31	junction_5	13.7608139294157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCGTCGAGCGTTTCTGC	-43861782	True	NA	-8	True	AATAAA	-15	NA	43862456	43824508	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
WTC11_00061831	chr22	-	988	4	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-65	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	8.52447456836295	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGAGTCACTTAGCA	-45162695	True	NA	-12	True	ACTAAA	-8	NA	45163846	45134298	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_45134798_45138823_45138917_45158059_45158186_45163576
WTC11_00061832	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.5388203202208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-46248790	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
WTC11_00061838	chr22	-	3038	17	FSM	ENSG00000196576.16	ENST00000463165.1	3038	17	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_16	33.5707624838936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGGGTTGGCTGAGT	-50281899	False	NA	-10	True	AATACA	-12	NA	50281934	50274984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281743_50281853
WTC11_00061841	chr22	-	4766	30	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	111	-4	intron_retention	FALSE	canonical	3	31	junction_12	137.93958594181	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACCTTCACCTGTTCC	-50580447	True	NA	-18	True	AATAAA	-9	NA	50582854	50568872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50573807_50573922_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578548_50578660_50579035_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
WTC11_00061843	chr22	-	1474	9	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	40	-1	intron_retention	FALSE	canonical	3	23	junction_7	154.037941754621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCCCTGCTGAGCA	-50582663	False	NA	32	True	AATAAA	-21	NA	50582780	50578959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581748_50581863_50582248
WTC11_00061844	chr22	-	1307	10	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_7	154.879722349511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCCCTGCTGAGCA	-50580406	True	NA	32	True	AATAAA	-21	NA	50582813	50578959	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581748_50581863_50582248_50582358_50582557
WTC11_00061845	chr22	-	1831	9	FSM	ENSG00000100299.18	ENST00000395619.3	1824	9	8	-15	1	0	multi-exon	FALSE	canonical	1	2	junction_8	18.417043736713	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-50627522	True	NA	-7	True	NA	NA	NA	50628151	50625017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627990
WTC11_00061846	chr22	-	2249	3	FSM	ENSG00000079974.19	ENST00000465063.5	2498	3	254	-5	254	2	multi-exon	FALSE	canonical	3	181	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	NA	False	NA	-28	True	AGTAAA	-19	NA	50770248	50767503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454
WTC11_00061848	chr22	-	1989	7	FSM	ENSG00000079974.19	ENST00000395591.5	1987	7	0	-2	0	2	multi-exon	FALSE	canonical	1	1	junction_3	82.535682519071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	-50780319	True	NA	-28	True	AGTAAA	-19	NA	50783662	50767503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50776669_50776750_50777951_50777982_50782187_50782352_50783500
WTC11_00061849	chr22	-	2290	10	NIC	ENSG00000079974.19	novel	2536	11	NA	NA	9	1	intron_retention	FALSE	canonical	1	1	junction_8	74.4636791071516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGTAAATGTATGTGCT	-50780278	True	NA	-29	True	AGTAAA	-18	NA	50783621	50767504	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782894_50783046_50783500
WTC11_00061855	chr22_KI270733v1_random	+	5818	2	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		128783	False	NA	NA	False	NA	NA	NA	128875	179772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_134166_179244
WTC11_00061856	chr22_KI270733v1_random	+	4490	2	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		129770	False	NA	NA	False	NA	NA	NA	130203	179772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_131625_176703
WTC11_00061861	chr22_KI270733v1_random	+	931	4	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	39.802289158065	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	118531	False	NA	NA	False	AATAAA	-15	NA	118541	140657	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_118723_139387_139525_139917_140015_140141
WTC11_00061862	chr22_KI270733v1_random	+	5818	2	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		128783	False	NA	NA	False	NA	NA	NA	128875	179772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_131427_176505
WTC11_00061863	chr22_KI270733v1_random	+	5063	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGCGCGCGCGCGCGCGC	129783	False	NA	NA	False	NA	NA	NA	130216	135279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_130200_135300
WTC11_00061864	chr22_KI270733v1_random	+	884	4	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	33.0689515339624	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGCACGGTGTGAACGT	137958	False	NA	NA	False	AATAAA	-10	NA	138207	140652	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_138347_139387_139525_139917_140015_140141
WTC11_00061865	chr22_KI270733v1_random	+	1404	2	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	106	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGCACGGTGTGAACGT	138872	False	NA	NA	False	AATAAA	-10	NA	139121	140652	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_140015_140141
WTC11_00061866	chr22_KI270733v1_random	-	10500	3	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCCGGCGGCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	179772	122272	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_123937_125855_125934_171014
WTC11_00061867	chr22_KI270733v1_random	-	10498	3	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCCGGCGGCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	179772	122272	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_123937_125855_134057_179139
WTC11_00061868	chr22_KI270733v1_random	-	4485	2	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGTCTCGGAGGGGGACG	NA	False	NA	NA	False	NA	NA	NA	179772	130208	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_134057_179135
WTC11_00061874	chr22_KI270733v1_random	-	10498	3	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAATAACCCGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	179772	122276	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_123937_125855_134417_179495
WTC11_00061878	chr22_KI270734v1_random	+	1201	5	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	85	junction_2	30.6675724503913	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTAGGGCCCCC	NA	False	NA	NA	False	NA	NA	NA	131543	137430	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_+_131756_131835_131997_135442_135544_136158_136300_136844
WTC11_00061879	chr22_KI270734v1_random	-	1937	12	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	76	junction_9	144.234198899676	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGCCCTCACACAGGGT	NA	False	NA	NA	False	AATAAA	-24	NA	161591	138076	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_146639_146722_147623_147704_148115_148233_150349_150500_150986_151022_161313
WTC11_00061880	chr22_KI270734v1_random	-	2231	14	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	266	junction_13	84.427063161541	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCCTCACACAGGGTCA	NA	False	NA	NA	False	AATAAA	-26	NA	161609	138074	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_146639_146722_147623_147704_148115_148233_148413_148479_150349_150500_150986_151022_156288_156498_161313
WTC11_00061881	chr22_KI270734v1_random	-	1927	12	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_9	153.390335553849	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCCTTTGCCCTCAC	NA	False	NA	NA	False	AATAAA	-17	NA	161594	138083	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_146639_146722_147623_147704_148115_148227_150349_150500_150986_151022_161313
WTC11_00061882	chr22_KI270734v1_random	-	1657	9	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_6	174.058494119075	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTGCCCTCACACAGG	NA	False	NA	NA	False	AATAAA	-22	NA	161592	138078	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_150349_150500_150986_151022_161313
WTC11_00061885	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	32.8757711168972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123320	True	NA	68	True	AATAAA	-15	NA	3126939	3149023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
WTC11_00061888	chr3	+	2526	8	NIC	ENSG00000072756.17	novel	2252	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	68.6309265683675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123345	True	NA	68	True	AATAAA	-15	NA	3126964	3149023	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_3127290_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
WTC11_00061891	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123400	True	NA	2	True	AATAAA	-13	NA	3127019	3130679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3128019_3129013_3129189_3129918
WTC11_00061892	chr3	+	2895	7	NIC	ENSG00000072756.17	novel	2147	7	NA	NA	4	2	intron_retention	FALSE	canonical	3	22	junction_1	91.0073257124575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATATTCTCTAAAGATT	3123445	True	NA	2	True	ATTAAA	-16	NA	3127064	3148957	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_3128019_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
WTC11_00061894	chr3	+	494	1	FSM	ENSG00000271870.1	ENST00000607052.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTGTTATTTCTGT	3152931	False	NA	15	True	AATAAA	-21	NA	3152941	3153435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3152900_3153400
WTC11_00061895	chr3	+	9562	3	NNC	ENSG00000175928.6	novel	571	3	NA	NA	-221	3176	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	41.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAACCATCTATCATAT	3799193	False	NA	16	True	ATTAAA	-29	NA	3799209	3853010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_3799920_3801041_3801247_3844363
WTC11_00061896	chr3	+	9639	3	NIC	ENSG00000175928.6	novel	571	3	NA	NA	-221	3176	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	72	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAACCATCTATCATAT	3799193	False	NA	16	True	ATTAAA	-29	NA	3799209	3853010	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_3799920_3800964_3801247_3844363
WTC11_00061897	chr3	+	9136	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	-3176	0	3176	multi-exon	FALSE	canonical	3	698	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAACCATCTATCATAT	3788520	True	NA	16	True	ATTAAA	-29	NA	3799430	3853010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3799920_3844363
WTC11_00061899	chr3	+	2423	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-45	-302	-8	302	multi-exon	FALSE	canonical	3	40	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	4302534	True	NA	NA	False	AATAAA	-45	NA	4303323	4317567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897_4313762_4316211
WTC11_00061900	chr3	+	1671	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTCCTACTTAATT	4302571	True	NA	13	True	AATAAA	-25	NA	4303360	4314402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897
WTC11_00061902	chr3	+	1087	10	FSM	ENSG00000150995.21	ENST00000467056.6	2845	10	116	1642	12	-1642	multi-exon	FALSE	canonical	1	5	junction_2	2.53859103528797	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGTAGGGTGGAGAAA	4492741	True	NA	NA	False	NA	NA	NA	4493465	4645728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4493606_4494430_4494507_4516475_4516584_4521023_4521095_4627762_4627879_4639383_4639471_4642092_4642252_4644135_4644235_4645386_4645471_4645581
WTC11_00061903	chr3	+	1095	8	FSM	ENSG00000150995.21	ENST00000647673.1	3058	8	0	1963	0	-1963	multi-exon	FALSE	canonical	2	7	junction_1	1.49829835452879	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCATTTTATTTTCAT	NA	False	NA	NA	False	NA	NA	NA	4691323	4711868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4691345_4693489_4693742_4697146_4697273_4699812_4699942_4702829_4702951_4706166_4706352_4710324_4710474_4711756
WTC11_00061904	chr3	+	4202	20	FSM	ENSG00000150995.21	ENST00000649694.1	6907	20	2705	0	2705	0	multi-exon	FALSE	canonical	3	8	junction_1	2.71244183720529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTACAAGAGAATCTC	NA	False	NA	NA	False	NA	NA	NA	4733087	4847370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4733221_4735163_4735355_4766529_4766711_4768510_4768765_4775241_4775443_4777263_4777375_4779549_4779646_4782618_4782742_4783815_4783921_4787946_4788140_4795064_4795188_4800424_4800601_4806102_4806268_4811264_4811461_4813141_4813235_4814422_4814563_4815052_4815219_4818081_4818243_4836773_4836936_4846138
WTC11_00061905	chr3	+	2493	9	FSM	ENSG00000150995.21	ENST00000650139.1	4188	9	1695	0	220	0	multi-exon	FALSE	canonical	3	8	junction_6	2.71281680177634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTACAAGAGAATCTCTC	NA	False	NA	NA	False	NA	NA	NA	4800424	4847372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4800601_4806102_4806268_4811264_4811461_4813141_4813235_4814422_4814563_4815052_4815219_4818081_4818243_4836773_4836936_4846138
WTC11_00061906	chr3	+	3036	5	FSM	ENSG00000134107.5	ENST00000256495.4	3152	5	-48	164	-48	-164	multi-exon	FALSE	canonical	3	20	junction_4	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCCTGTGGAAGAGA	4979365	False	NA	-6	True	AATAAA	-5	NA	4979388	4985159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4979799_4979961_4980032_4980300_4980409_4981391_4981516_4982835
WTC11_00061908	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	17.6414914965323	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	5117366	True	NA	11	True	AATAAA	-16	NA	5122291	5180911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
WTC11_00061909	chr3	+	6131	12	FSM	ENSG00000134109.11	ENST00000256497.9	6113	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	44	junction_8	6.42952898548615	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCATCTTGTTTCTTTT	5187676	False	NA	5	True	ATTAAA	-17	NA	5187688	5219958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
WTC11_00061910	chr3	+	307	3	FSM	ENSG00000134109.11	ENST00000492751.1	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATAATAACTGACTCCA	5195042	False	NA	NA	False	NA	NA	NA	5195105	5201779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5195282_5199591_5199696_5201752
WTC11_00061911	chr3	+	8260	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	-16	40	0	-40	multi-exon	FALSE	canonical	3	43	junction_5	5.98665181883831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTTTAAAGGCCTAA	8501796	False	NA	NA	False	NA	NA	NA	8501806	8574628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
WTC11_00061914	chr3	+	3756	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	-2	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	80.2745289615579	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358005	True	NA	21	True	AATAAA	-21	NA	9363051	9386791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00061916	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	83.8841058239077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358005	True	NA	21	True	AATAAA	-21	NA	9363051	9386791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00061917	chr3	+	1993	10	NNC	ENSG00000134077.16	novel	3961	10	NA	NA	2	21	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	121.050953459001	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCAGTTTAGGAAGCC	9358053	True	NA	26	True	TTTAAA	-39	NA	9363099	9384891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9363313_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00061920	chr3	+	4182	3	FSM	ENSG00000134077.16	ENST00000464045.1	601	3	-1412	-2169	-1148	248	multi-exon	FALSE	canonical	3	437	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCACTGCAAGGACCAAA	NA	False	NA	NA	False	NA	NA	NA	9381767	9387039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9383310_9384211_9384336_9384523
WTC11_00061921	chr3	+	1842	10	FSM	ENSG00000168137.20	ENST00000431285.5	1824	10	-18	0	-18	0	multi-exon	FALSE	canonical	3	65	junction_6	70.2020013080419	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACCAAAGGGTTGAG	9397538	False	NA	NA	False	NA	NA	NA	9397596	9440698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826_9430052_9433369_9433563_9433844_9433951_9434276_9434486_9434823_9434883_9435727_9435907_9440455
WTC11_00061922	chr3	+	6941	23	FSM	ENSG00000168137.20	ENST00000402198.7	6931	23	-18	8	-18	-8	multi-exon	FALSE	canonical	3	12	junction_21	98.2713922203487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAACTTCTTTGTCCA	9397538	False	NA	16	True	AATAAA	-25	NA	9397596	9478146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
WTC11_00061928	chr3	+	1415	4	FSM	ENSG00000168137.20	ENST00000468208.2	1415	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	84.0092587489948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGACTGCGCTGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	9423107	9430831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9423258_9424466_9424540_9428822_9429010_9429826
WTC11_00061937	chr3	+	2496	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	-50	6	5	0	multi-exon	FALSE	canonical	3	209	junction_17	113.887981026192	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTCTTGTGTCATCA	9642708	True	NA	15	True	AATAAA	-18	NA	9649454	9702387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
WTC11_00061938	chr3	+	2160	17	FSM	ENSG00000163719.20	ENST00000351233.9	2105	17	-57	2	5	0	multi-exon	FALSE	canonical	3	147	junction_16	108.465432281442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTCTTGTGTCATCA	9642708	True	NA	15	True	AATAAA	-18	NA	9649454	9702387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9701789
WTC11_00061940	chr3	+	2373	18	FSM	ENSG00000163719.20	ENST00000353332.9	2368	18	-5	0	-5	0	multi-exon	TRUE	canonical	3	209	junction_17	93.7349572706622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	21	True	AATAAA	-24	NA	9649427	9702393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
WTC11_00061942	chr3	+	979	9	FSM	ENSG00000163719.20	ENST00000430020.5	1451	9	0	472	0	39	multi-exon	FALSE	canonical	3	11	junction_3	195.961730957858	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGCCCTCGAGCCA	9642758	True	NA	NA	False	NA	NA	NA	9649504	9683256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177
WTC11_00061943	chr3	+	2219	17	NIC	ENSG00000163719.20	novel	2368	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_8	143.84665228986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	9642760	True	NA	21	True	AATAAA	-24	NA	9649506	9702393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
WTC11_00061944	chr3	+	2145	17	NIC	ENSG00000163719.20	novel	2368	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_1	149.002044868519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	9642760	True	NA	21	True	AATAAA	-24	NA	9649506	9702393	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9649743_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
WTC11_00061946	chr3	+	2918	1	FSM	ENSG00000163719.20	ENST00000606184.1	2966	1	49	-1	49	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	21	True	AATAAA	-24	NA	9699475	9702393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9699500_9702400
WTC11_00061947	chr3	+	1711	15	NNC	ENSG00000144550.14	novel	2042	21	NA	NA	1474	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.280528942011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	9704791	True	NA	4	True	AATAAA	-17	NA	9705306	9729908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9705501_9705983_9706064_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
WTC11_00061950	chr3	+	4690	13	FSM	ENSG00000156983.17	ENST00000683639.1	4666	13	-24	0	1	0	multi-exon	FALSE	canonical	3	37	junction_7	20.584514136171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	9730342	True	NA	NA	False	NA	NA	NA	9731729	9747873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
WTC11_00061952	chr3	+	4426	13	FSM	ENSG00000156983.17	ENST00000684206.1	4402	13	-24	0	1	0	multi-exon	FALSE	canonical	3	15	junction_8	26.0142856053276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCAATTTAGAATTCT	9730342	True	NA	11	True	AATATA	-18	NA	9731729	9747999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743580_9743902_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
WTC11_00061953	chr3	+	4749	14	FSM	ENSG00000156983.17	ENST00000383829.7	4743	14	-6	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	23.7045422955978	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	9730341	True	NA	27	True	AATAAA	-15	NA	9731728	9748015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
WTC11_00061954	chr3	+	4604	14	FSM	ENSG00000156983.17	ENST00000424362.7	4604	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	22.8377347864782	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAACTGTCAATTTA	9730460	False	NA	4	True	AATATA	-11	NA	9731847	9747992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
WTC11_00061957	chr3	+	4420	12	FSM	ENSG00000156983.17	ENST00000682208.1	4420	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	20.1551830792647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	9732743	False	NA	27	True	AATAAA	-15	NA	9734130	9748015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
WTC11_00061958	chr3	+	2232	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	-55	43	-55	26	multi-exon	FALSE	canonical	3	25	junction_6	59.4467548876023	4520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCTCTGGGAGA	NA	False	NA	51	True	ATTAAA	-31	NA	9749888	9766694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
WTC11_00061959	chr3	+	1638	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	-8	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	43.4766859618143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	NA	False	NA	16	True	AATAAA	-23	NA	9749943	9757407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
WTC11_00061960	chr3	+	1655	7	FSM	ENSG00000114026.22	ENST00000302003.11	1655	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	58.4009132348687	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	NA	False	NA	16	True	AATAAA	-23	NA	9749943	9757407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757043
WTC11_00061962	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	22.8175371151227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	9749055	False	NA	-14	True	NA	NA	NA	9749980	9757377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
WTC11_00061963	chr3	+	1682	4	FSM	ENSG00000114026.22	ENST00000383826.9	1069	4	-69	-544	0	-12	multi-exon	FALSE	canonical	3	11	junction_3	89.4886709154976	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAAAGAGGATTTGCTA	9749933	False	NA	13	True	AATAAA	-21	NA	9750017	9766656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9765808
WTC11_00061970	chr3	+	1434	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	-1	0	1	multi-exon	FALSE	canonical	3	427	junction_1	169.624762343238	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATGCTGTGTGTGTGTG	9781246	True	NA	40	True	ATTAAA	-32	NA	9793081	9807102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
WTC11_00061974	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	9885218	True	NA	11	True	ATTAAA	-25	NA	9890609	9894349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9890812_9892914
WTC11_00061975	chr3	+	369	3	FSM	ENSG00000163702.20	ENST00000497102.5	547	3	0	178	0	-59	multi-exon	FALSE	canonical	1	2	junction_2	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACCCGCTCCTCCACAC	9916782	True	NA	NA	False	NA	NA	NA	9917108	9917898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917863
WTC11_00061977	chr3	+	2147	18	FSM	ENSG00000163702.20	ENST00000413608.2	2147	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	14.028887645901	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGGCCCACACGCG	9916989	False	NA	28	True	AATAAA	-19	NA	9917315	9933616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
WTC11_00061979	chr3	+	2171	11	FSM	ENSG00000163703.20	ENST00000684493.1	2164	11	-7	0	5	0	multi-exon	FALSE	canonical	3	80	junction_1	34.8258524662355	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTTTCCTCGGAGTCC	9932483	True	NA	26	True	AATAAA	-40	NA	9933797	9945413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
WTC11_00061980	chr3	+	2754	8	FSM	ENSG00000163703.20	ENST00000684648.1	2740	8	-14	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	69.7134074886135	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCATCTCAGGAAATAAA	9932510	True	NA	-27	True	NA	NA	NA	9933824	9944990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9940849_9941027_9941110_9941207_9942812_9942897_9943076
WTC11_00061981	chr3	+	2704	10	FSM	ENSG00000163703.20	ENST00000383811.8	2695	10	-9	0	0	0	multi-exon	FALSE	canonical	3	117	junction_9	25.0397215304202	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	9932510	True	NA	19	True	AATAAA	-33	NA	9933824	9945406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
WTC11_00061982	chr3	+	2205	11	FSM	ENSG00000163703.20	ENST00000452070.6	2196	11	-9	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.6130988992649	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	9932510	True	NA	19	True	AATAAA	-33	NA	9933824	9945406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
WTC11_00061983	chr3	+	1429	7	FSM	ENSG00000163703.20	ENST00000684629.1	1429	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	62.1986066296237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCTGGGGCGGGAGA	9932540	True	NA	NA	False	NA	NA	NA	9933854	9943515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380
WTC11_00061985	chr3	+	614	4	FSM	ENSG00000230082.1	ENST00000431558.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACCACTGGTTTATTG	9947388	False	NA	2	True	AGTAAA	-16	NA	9947403	9954787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9947605_9948066_9948181_9948354_9948470_9954603
WTC11_00061987	chr3	+	5119	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	-23	0	0	0	multi-exon	TRUE	canonical	3	68	junction_1	18.2313419148219	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	10017804	True	NA	18	True	AATAAA	-18	NA	10026413	10101932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
WTC11_00061988	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	20.5619011606462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	10017889	False	NA	16	True	AATAAA	-16	NA	10026498	10101930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
WTC11_00061993	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_2	19.5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	10093997	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10115820_10125625_10125709_10126268
WTC11_00061994	chr3	+	4430	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	65	junction_1	12	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141740	False	NA	10	True	ATTAAA	-20	NA	10141761	10153667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10142188_10146513_10146637_10149786
WTC11_00061996	chr3	+	3066	3	FSM	ENSG00000134086.8	ENST00000477538.1	958	3	-171	-1937	-171	0	multi-exon	FALSE	canonical	3	12	junction_1	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	10142344	False	NA	NA	False	NA	NA	NA	10142374	10152082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10143022_10146513_10146637_10149786
WTC11_00061997	chr3	+	5342	8	FSM	ENSG00000157014.11	ENST00000287652.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	7.90763000177031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCAGTCTCTCCGTGTTT	NA	False	NA	21	True	AATAAA	-19	NA	10248022	10281216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279035_10279220
WTC11_00061998	chr3	+	4937	8	FSM	ENSG00000157014.11	ENST00000448281.7	4937	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	15.0047611491439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCTCCGTGTTTGT	10246821	True	NA	23	True	AATAAA	-21	NA	10248458	10281218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279064_10279220
WTC11_00062000	chr3	+	4672	4	FSM	ENSG00000240288.8_ENSG00000231177.4	ENST00000439539.3	1708	4	-2964	0	-1629	0	multi-exon	FALSE	canonical	0	0	junction_3	8.17856276425687	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGTTGGTTTAGCAAG	10282779	False	NA	1	True	NA	NA	NA	10282789	10293449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10285854_10287413_10287482_10287944_10288103_10292067
WTC11_00062001	chr3	+	5942	2	FSM	ENSG00000240288.8_ENSG00000231177.4	ENST00000605105.5	950	2	-2964	-2028	-1629	42	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTTAATCTCCAGAC	10282779	False	NA	NA	False	ATTAAA	-17	NA	10282789	10294945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10285854_10292067
WTC11_00062002	chr3	+	1328	1	FSM	ENSG00000231177.4	ENST00000475197.1	1328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACAGTTTGAACATTTA	10284408	False	NA	8	True	AATAAA	-19	NA	10284418	10285746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10284400_10285700
WTC11_00062003	chr3	+	2986	2	FSM	ENSG00000240288.8	ENST00000662597.1	2986	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGTAGTACATTTATCAAA	10287943	False	NA	NA	False	NA	NA	NA	10287956	10294903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10288107_10292067
WTC11_00062004	chr3	+	2767	4	FSM	ENSG00000132164.10	ENST00000454147.1	2794	4	27	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTGTGGCTTTTCTTT	10816090	True	NA	NA	False	AATACA	-20	NA	10816227	10825498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10816522_10819464_10819600_10819711_10819853_10823301
WTC11_00062005	chr3	+	4982	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	-23	0	-4	0	multi-exon	FALSE	canonical	3	76	junction_11	11.1964776207123	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	11270126	True	NA	NA	False	AATAAA	-17	NA	11272392	11557665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
WTC11_00062006	chr3	+	354	4	FSM	ENSG00000197548.13	ENST00000427759.5	455	4	1	100	0	-100	multi-exon	FALSE	canonical	1	3	junction_3	40.8357142163028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAATGGAATCTTTT	NA	False	NA	NA	False	CATAAA	-25	NA	11364658	11477207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11364735_11379971_11380053_11426803_11426927_11477133
WTC11_00062007	chr3	+	3338	13	FSM	ENSG00000157152.17	ENST00000621198.5	3320	13	-24	6	-24	-6	multi-exon	FALSE	canonical	3	11	junction_12	9.54339503996816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAATATCTGAATGTTAA	12003810	True	NA	NA	False	AATAAA	-18	NA	12004363	12192026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12004929_12140650_12140709_12141904_12141997_12145678_12145836_12151236_12151327_12161545_12161609_12162011_12162155_12167233_12167309_12168375_12168479_12169756_12169907_12183311_12183373_12187368_12187613_12190489
WTC11_00062008	chr3	+	3883	11	FSM	ENSG00000157152.17	ENST00000620175.4	3871	11	-12	0	6	0	multi-exon	FALSE	canonical	3	20	junction_2	6.87313611097583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGTTAAGTTGTAACG	12003840	True	NA	3	True	AATAAA	-19	NA	12004393	12185728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12004929_12140650_12140709_12141904_12141997_12145678_12145836_12151236_12151327_12161545_12161609_12162011_12162155_12167233_12167309_12168375_12168479_12169756_12169907_12183311
WTC11_00062009	chr3	+	286	1	FSM	ENSG00000225026.1	ENST00000419844.1	272	1	4	-18	4	18	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTCCTCCTGCCCCTC	NA	False	NA	NA	False	NA	NA	NA	12328006	12328292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12328000_12328300
WTC11_00062010	chr3	+	2895	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	18	0	10	0	multi-exon	FALSE	canonical	3	95	junction_1	14.7372826531895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	12482005	True	NA	NA	False	NA	NA	NA	12484452	12505766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
WTC11_00062011	chr3	+	2412	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	32	0	10	0	multi-exon	FALSE	canonical	3	56	junction_6	21.4691783688783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	12482005	True	NA	NA	False	AATAGA	-10	NA	12484452	12533653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
WTC11_00062013	chr3	+	2139	13	FSM	ENSG00000154743.19	ENST00000680458.1	2185	13	46	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_11	42.2396437011488	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAGAAAGTCATGAAGA	12482019	True	NA	22	True	AATAAA	-14	NA	12484466	12533307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12530854_12530942_12531569_12531660_12532661
WTC11_00062015	chr3	+	4931	8	FSM	ENSG00000154743.19	ENST00000475595.2	4963	8	32	0	-13	0	multi-exon	FALSE	canonical	3	6	junction_7	45.0518975115117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGAGATTGTGCCACTG	12482019	True	NA	NA	False	NA	NA	NA	12484466	12533603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12529761
WTC11_00062018	chr3	+	1778	11	FSM	ENSG00000154743.19	ENST00000412698.3	1810	11	32	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_10	40.2412723456901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTACCACTTTATGCTGT	12482019	True	NA	-7	True	AATAAA	-3	NA	12484466	12539610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
WTC11_00062022	chr3	+	2016	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	46	0	-13	0	multi-exon	FALSE	canonical	3	26	junction_12	30.1343058471386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	12482019	True	NA	41	True	TTTAAA	-9	NA	12484466	12539658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
WTC11_00062023	chr3	+	2293	11	FSM	ENSG00000154743.19	ENST00000681676.1	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	39.344631145812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGTGAGAAAGTCA	12482057	True	NA	16	True	AATAAA	-8	NA	12484504	12533301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
WTC11_00062024	chr3	+	2163	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	-14	0	-3	0	multi-exon	FALSE	canonical	2	15	junction_1	33.8509128018826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	12482029	True	NA	32	True	AATAAA	-24	NA	12484476	12533317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
WTC11_00062025	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9622874918325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	12482032	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
WTC11_00062034	chr3	+	2524	7	FSM	ENSG00000075975.17	ENST00000677237.1	2510	7	-14	0	-14	0	multi-exon	FALSE	canonical	1	71	junction_2	46.54985380094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGCATAACCTTGTGAA	12554293	True	NA	NA	False	NA	NA	NA	12557042	12583255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807
WTC11_00062035	chr3	+	5798	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	-44	-4318	-14	613	multi-exon	FALSE	canonical	2	44	junction_1	56.1231285260859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGACCATTTTATTT	12554293	True	NA	NA	False	NA	NA	NA	12557042	12586821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
WTC11_00062036	chr3	+	3719	8	FSM	ENSG00000075975.17	ENST00000170447.12	2775	8	0	-944	0	944	multi-exon	FALSE	canonical	1	71	junction_2	43.820599014153	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAACAAAGCCCAAGAAT	12554337	True	NA	NA	False	NA	NA	NA	12557086	12584657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
WTC11_00062039	chr3	+	4573	15	FSM	ENSG00000144712.12	ENST00000456430.6	4573	15	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	13.2472561656506	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCCTCTGCACGACT	12795930	True	NA	11	True	AATAAA	-18	NA	12796679	12834803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12796789_12803487_12803632_12807305_12807461_12808209_12808334_12810058_12810325_12812989_12813096_12813245_12813389_12815140_12815434_12815866_12816009_12816373_12817877_12820085_12820182_12825469_12825640_12827439_12827605_12831464_12831573_12833754
WTC11_00062040	chr3	+	1028	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	9	junction_3	20.2813543269017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	13479506	True	NA	NA	False	NA	NA	NA	13480292	13504849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
WTC11_00062041	chr3	+	2395	5	FSM	ENSG00000163517.15	ENST00000404548.5	577	5	0	-1818	0	0	multi-exon	FALSE	canonical	2	3	junction_3	25.8891869319992	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTCATCTTCTGAGTC	13479537	True	NA	2	True	AATAAA	-10	NA	13480323	13506407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13504093_13504273_13504467
WTC11_00062042	chr3	+	2832	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	-13	0	-10	0	multi-exon	FALSE	canonical	3	29	junction_5	13.2506696779287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479506	True	NA	11	True	AATAAA	-19	NA	13480292	13506416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
WTC11_00062043	chr3	+	793	9	FSM	ENSG00000163517.15	ENST00000405478.5	799	9	6	0	6	0	multi-exon	FALSE	canonical	3	20	junction_1	14.2894191624432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGGATAAGGTGGAGA	13479563	True	NA	NA	False	NA	NA	NA	13480349	13504142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093
WTC11_00062044	chr3	+	524	5	FSM	ENSG00000163517.15	ENST00000405025.5	576	5	52	0	17	0	multi-exon	FALSE	canonical	2	3	junction_3	27.2304976083802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGTACCAGAAGCGCACA	13479641	True	NA	NA	False	NA	NA	NA	13480427	13504543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480447_13481245_13481395_13483463_13483565_13504093_13504273_13504467
WTC11_00062045	chr3	+	2865	10	NIC	ENSG00000163517.15	novel	2766	9	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	14.8332292963476	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479570	True	NA	11	True	AATAAA	-19	NA	13480356	13506416	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
WTC11_00062047	chr3	+	520	6	FSM	ENSG00000163517.15	ENST00000434848.5	520	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	25.9953842056624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAACCGCCACATCTACC	13479913	False	NA	NA	False	NA	NA	NA	13480699	13502939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480774_13481245_13481395_13483463_13483565_13500712_13500790_13501870_13501934_13502883
WTC11_00062049	chr3	+	4209	17	FSM	ENSG00000163520.14	ENST00000295760.11	4127	17	-91	9	-35	6	multi-exon	FALSE	canonical	3	73	junction_1	18.8181054771728	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTACTTTTGTAAAG	13548048	True	NA	15	True	TATAAA	-24	NA	13549089	13638413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
WTC11_00062050	chr3	+	904	7	FSM	ENSG00000170876.8	ENST00000432444.1	908	7	4	0	4	0	multi-exon	FALSE	canonical	1	3	junction_1	123.946224898811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAAACCCCAGGTGAGA	14122072	True	NA	NA	False	NA	NA	NA	14125018	14132921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14125206_14128854_14129086_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865
WTC11_00062051	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	20.5880491692399	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	14122105	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
WTC11_00062052	chr3	+	3358	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	1	0	-1	multi-exon	FALSE	canonical	3	2520	junction_1	773.395543474791	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGTTGATGTTTCTCT	14146216	True	NA	5	True	AATAAA	-32	NA	14178816	14201121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
WTC11_00062053	chr3	+	441	2	FSM	ENSG00000131389.18	ENST00000622810.4	565	2	0	124	0	-124	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTGGAGGCCCTTCAC	14385118	True	NA	NA	False	NA	NA	NA	14402575	14411199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14411030
WTC11_00062054	chr3	+	1983	11	FSM	ENSG00000131389.18	ENST00000610642.4	1983	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	121.386201851776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAGATGCAGAGT	14385118	True	NA	NA	False	NA	NA	NA	14402575	14478901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14472204_14472318_14477204_14477343_14478465
WTC11_00062055	chr3	+	6526	15	FSM	ENSG00000131389.18	ENST00000613060.4	6526	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	144.333743774063	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGGTTGTGTTCTG	14385118	True	NA	22	True	AATAAA	-22	NA	14402575	14489349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443627_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14468087_14468213_14472204_14472318_14477204_14477343_14478465_14478569_14479084_14479186_14481670_14481842_14484866
WTC11_00062056	chr3	+	6401	14	FSM	ENSG00000131389.18	ENST00000618278.4	6401	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	149.776243366307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGGTTGTGTTCTG	14385118	True	NA	22	True	AATAAA	-22	NA	14402575	14489349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443627_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14472204_14472318_14477204_14477343_14478465_14478569_14479084_14479186_14481670_14481842_14484866
WTC11_00062057	chr3	+	1266	5	FSM	ENSG00000131389.18	ENST00000621751.4	1252	5	-14	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	32.7671710710583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATGAAGCTGAAGT	14385148	True	NA	107	True	AATATA	-24	NA	14402605	14448188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581
WTC11_00062058	chr3	+	2311	5	NNC	ENSG00000131389.18	novel	6500	15	NA	NA	0	-1438	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	214.807326457921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTAGCCTGGTGTGTGT	14385148	True	NA	NA	False	AATAAA	-15	NA	14402605	14456588	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_14402848_14416411_14416454_14445716_14445852_14447581_14447817_14454931
WTC11_00062059	chr3	+	6594	15	FSM	ENSG00000131389.18	ENST00000649500.1	6480	15	-114	0	-106	0	multi-exon	FALSE	canonical	0	0	junction_8	112.923759724002	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCTTATAACATGAAAATAA	14402458	False	NA	-20	True	TTTAAA	-35	NA	14402469	14489307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14468087_14468213_14472204_14472318_14477204_14477343_14478465_14478569_14479084_14479186_14481670_14481842_14484866
WTC11_00062060	chr3	+	689	5	FSM	ENSG00000131389.18	ENST00000615188.1	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	178.007724551492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGGCTAGTGTGTTTC	14385190	True	NA	NA	False	NA	NA	NA	14402647	14458026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14445716_14445852_14447581_14447817_14457949
WTC11_00062061	chr3	+	2956	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	-16	0	-16	0	multi-exon	TRUE	canonical	3	124	junction_7	28.3788653754867	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	14649684	True	NA	7	True	AATAAA	-17	NA	14651745	14672655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
WTC11_00062062	chr3	+	1139	7	FSM	ENSG00000154781.17	ENST00000465759.1	1139	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_5	13.832329280831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTAAAACTTGT	14649711	True	NA	NA	False	NA	NA	NA	14651772	14667298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804
WTC11_00062063	chr3	+	6174	21	NIC	ENSG00000154783.12	novel	5903	20	NA	NA	-320	-62	combination_of_known_junctions	TRUE	canonical	3	47	junction_2	10.5084489816528	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCCAGTTTGCAG	14810504	False	NA	5	True	ATTAAA	-15	NA	14810532	14934503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_14810866_14818955_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14926069_14926199_14932576_14932732_14933130
WTC11_00062064	chr3	+	5903	20	FSM	ENSG00000154783.12	ENST00000285046.10	5903	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.6672148981921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTAGACAGTGTTCTTG	14818941	False	NA	73	True	ATTAAA	-25	NA	14818961	14934571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14926069_14926199_14932576_14932732_14933130
WTC11_00062065	chr3	+	5768	19	FSM	ENSG00000154783.12	ENST00000543601.5	5768	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	16.3406068460986	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGTGATTAGACAGTG	14818941	False	NA	67	True	ATTAAA	-19	NA	14818961	14934565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14932576_14932732_14933130
WTC11_00062066	chr3	+	1239	2	FSM	ENSG00000154783.12	ENST00000487605.1	2277	2	1038	0	1038	0	multi-exon	FALSE	canonical	3	86	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGTTAAAATTTAGTAA	14931790	False	NA	6	True	AATAAA	-18	NA	14931800	14933438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14932732_14933130
WTC11_00062067	chr3	+	8418	14	FSM	ENSG00000177463.16	ENST00000425241.6	8419	14	1	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	7.86799373689297	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATCCTGCTCTTCATT	14945361	True	NA	10	True	ATTAAA	-18	NA	14947583	15049273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14947907_15003875_15003987_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
WTC11_00062068	chr3	+	2430	15	FSM	ENSG00000177463.16	ENST00000323373.10	2406	15	-24	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	11.2832275741383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATGTGTGTATATATAT	14947688	True	NA	13	True	ATTAAA	-25	NA	14947704	15043349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14947907_15003875_15003987_15004556_15004614_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
WTC11_00062070	chr3	+	1935	14	FSM	ENSG00000177463.16	ENST00000393102.7	1937	14	2	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.3523040584252	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAACAGAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	14962408	15043029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14962493_15003875_15003987_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
WTC11_00062071	chr3	+	8113	14	FSM	ENSG00000177463.16	ENST00000617312.4	8113	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.6125824434497	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATCCTGCTCTTCATT	15003904	True	NA	10	True	ATTAAA	-18	NA	15003914	15049273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15003987_15004556_15004614_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
WTC11_00062074	chr3	+	768	4	FSM	ENSG00000131375.10	ENST00000418994.1	781	4	13	0	13	0	multi-exon	FALSE	canonical	2	4	junction_2	48.7920758593715	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGATGCTATAGAATTG	15204128	True	NA	NA	False	AAAAAG	-7	NA	15206164	15217529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15206598_15210801_15210923_15212103_15212213_15217424
WTC11_00062075	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	27.8701901679913	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	15204209	True	NA	NA	False	AATAAA	-13	NA	15206245	15252916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
WTC11_00062077	chr3	+	2333	4	FSM	ENSG00000131375.10	ENST00000463417.5	2319	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	113	junction_1	25.8370965001015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCATAGTTTAAGTTA	NA	False	NA	6	True	AATAAA	-17	NA	15245872	15252302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15246795_15247326_15247458_15250930_15251024_15251115
WTC11_00062078	chr3	+	4335	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	-25	-3273	-25	0	multi-exon	FALSE	canonical	3	7	junction_2	30.4168949763121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	15425385	True	NA	10	True	AATAAA	-20	NA	15427572	15442613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
WTC11_00062079	chr3	+	4467	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	73	junction_4	3.49857113690718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	15425390	True	NA	10	True	AATAAA	-20	NA	15427577	15442613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
WTC11_00062080	chr3	+	2097	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	223	-237	-133	0	multi-exon	FALSE	canonical	1	64	junction_2	9.67241208569794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	NA	False	NA	21	True	AATAAA	-27	NA	15601592	15645819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
WTC11_00062081	chr3	+	2102	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	-33	0	-14	0	multi-exon	FALSE	canonical	1	64	junction_2	22.2910046630673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	15601700	False	NA	21	True	AATAAA	-27	NA	15601711	15645819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
WTC11_00062082	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	15599627	True	NA	31	True	ATTAAA	-31	NA	15601744	15642252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15601895_15635423_15635689_15641907
WTC11_00062083	chr3	+	203	1	FSM	ENSG00000263740.2	ENST00000584058.2	295	1	0	92	0	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGTCAAAACTCCCGT	NA	False	NA	NA	False	NA	NA	NA	15738514	15738717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15738500_15738700
WTC11_00062084	chr3	+	1333	1	FSM	ENSG00000224728.1	ENST00000413639.1	1525	1	189	3	189	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGGACAGCGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	15878235	15879568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15878200_15879600
WTC11_00062085	chr3	+	981	6	FSM	ENSG00000154814.14	ENST00000452581.5	960	6	-21	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	62.0303151692783	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAACAAAAGAAATGGAT	16263076	True	NA	NA	False	NA	NA	NA	16265211	16301786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16286341_16286449_16294855_16294998_16301625
WTC11_00062086	chr3	+	3931	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	-15	0	-5	0	multi-exon	FALSE	canonical	3	116	junction_2	19.4867743610891	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	16263061	True	NA	3	True	ATTAAA	-16	NA	16265196	16306087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
WTC11_00062087	chr3	+	7366	9	FSM	ENSG00000154814.14	ENST00000627468.2	3983	9	52	-3435	0	3434	multi-exon	FALSE	canonical	3	12	junction_2	48.2336436007068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTTTTCCCCT	16263076	True	NA	NA	False	NA	NA	NA	16265211	16309521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
WTC11_00062088	chr3	+	1934	10	NNC	ENSG00000154814.14	novel	1681	10	NA	NA	0	13886	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	46.630409195378	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCCCAAGCCAGAGCAT	16263076	True	NA	NA	False	GATAAA	-22	NA	16265211	16319973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16319460
WTC11_00062089	chr3	+	1656	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	-13	0	-5	0	multi-exon	FALSE	canonical	3	8	junction_9	59.9650103738489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	16263061	True	NA	NA	False	NA	NA	NA	16265196	16337315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
WTC11_00062091	chr3	+	4581	7	NNC	ENSG00000154822.18	novel	4161	6	NA	NA	-710	-5	intron_retention	FALSE	canonical	3	16	junction_1	25.4143441561825	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATAGCAGTACATGTGT	16883292	True	NA	19	True	ATTAAA	-21	NA	16884244	17090599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_16884537_16884821_16885367_17009673_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
WTC11_00062092	chr3	+	4156	6	FSM	ENSG00000154822.18	ENST00000615277.5	4161	6	0	5	0	-5	multi-exon	FALSE	canonical	3	65	junction_2	11.9431989014669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATAGCAGTACATGTGT	16884632	True	NA	19	True	ATTAAA	-21	NA	16884954	17090599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16885367_17009673_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
WTC11_00062094	chr3	+	2271	5	ISM	ENSG00000154822.18	ENST00000432376.5	3940	6	78048	3	644	-3	3prime_fragment	FALSE	canonical	3	65	junction_1	12.457427503301	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTCTCCAATAGCAG	NA	False	NA	10	True	ATTAAA	-12	NA	17011137	17090590	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
WTC11_00062095	chr3	+	427	1	FSM	ENSG00000227309.1	ENST00000449897.1	361	1	59	-125	59	125	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTTCAACTTATTTA	NA	False	NA	NA	False	AAGAAA	-34	NA	17465208	17465635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17465200_17465600
WTC11_00062096	chr3	+	271	1	FSM	ENSG00000271841.1	ENST00000607194.1	63	1	-210	2	-210	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGCTATTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17664752	17665023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17664800_17665000
WTC11_00062097	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	6.06217782649107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	18445226	True	NA	NA	False	AATAAA	-19	NA	18445236	18469714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
WTC11_00062099	chr3	+	390	3	FSM	ENSG00000228956.9	ENST00000598740.5	676	3	0	286	0	121	multi-exon	FALSE	canonical	1	4	junction_1	12	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCACTATATTCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	18465982	18527352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18466040_18526386_18526541_18527173
WTC11_00062100	chr3	+	652	4	FSM	ENSG00000228956.9	ENST00000598688.5	702	4	0	50	0	-12	multi-exon	FALSE	canonical	1	1	junction_3	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAAATATATTAAAAGT	NA	False	NA	NA	False	AATGAA	-27	NA	18465982	18534974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18466040_18526386_18526541_18527173_18527327_18534686
WTC11_00062101	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_4	58.6153563496802	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	19931592	True	NA	15	True	AATAAA	-17	NA	19947096	19985175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
WTC11_00062103	chr3	+	1378	7	FSM	ENSG00000144566.11	ENST00000446547.5	1358	7	-20	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	439.557226712922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGTACAGTAGTCA	19946569	True	NA	NA	False	AATATA	-45	NA	19947378	19984147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_19947522_19950805_19951062_19970547_19970718_19975600_19975753_19976046_19976170_19978309_19978404_19983707
WTC11_00062106	chr3	+	5461	7	ISM	ENSG00000114166.8	ENST00000263754.5	4410	18	96531	-2867	9499	2867	3prime_fragment	FALSE	canonical	1	3	junction_2	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTTGCTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	20136976	20157271	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_20137053_20140220_20140365_20146315_20146431_20147962_20148000_20148242_20148307_20148402_20148488_20152331
WTC11_00062107	chr3	+	675	2	FSM	ENSG00000114166.8	ENST00000468400.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTTATTTTACGCT	NA	False	NA	NA	False	NA	NA	NA	20148239	20149010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_20148307_20148402
WTC11_00062110	chr3	+	2823	6	FSM	ENSG00000182247.10	ENST00000425792.5	1248	6	-10	-1565	-10	-7	multi-exon	FALSE	canonical	3	668	junction_5	58.1377674149945	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGATTTTTGGAAAGTT	23194004	True	NA	2	True	AATAAA	-15	NA	23203009	23591787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
WTC11_00062111	chr3	+	1330	5	FSM	ENSG00000182247.10	ENST00000335798.8	1330	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	307.709278378147	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGGTAACCCGACATT	23194156	True	NA	25	True	AATAAA	-21	NA	23203161	23590579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23532553_23532702_23589733
WTC11_00062114	chr3	+	1408	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.8306254942604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	23793854	True	NA	24	True	AATAAA	-27	NA	23805954	23891316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
WTC11_00062115	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	38.7432574779148	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	23793854	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
WTC11_00062116	chr3	+	622	4	FSM	ENSG00000170142.12	ENST00000442670.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.87136220471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCTTTCTATCTGCTC	23807014	True	NA	NA	False	NA	NA	NA	23807088	23889216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23807422_23811459_23811511_23887566_23887700_23889111
WTC11_00062117	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	50.8152290165065	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	23807508	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
WTC11_00062119	chr3	+	2144	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	-16	-1304	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	10769.1344230733	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTTTTGTCATCTTA	23669530	True	NA	NA	False	AATAAA	-31	NA	23917131	23920856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
WTC11_00062120	chr3	+	2221	4	FSM	ENSG00000174748.22	ENST00000413699.7	2221	4	0	0	0	0	multi-exon	FALSE	canonical	3	2565	junction_1	10192.4364222801	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	23669530	True	NA	NA	False	CATAAA	-18	NA	23917131	23920989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917240_23917849_23918032_23918439_23918577_23919195
WTC11_00062121	chr3	+	2155	4	FSM	ENSG00000174748.22	ENST00000307839.10	2155	4	0	0	0	0	multi-exon	FALSE	canonical	3	12303	junction_1	5606.50302971667	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	23669530	True	NA	NA	False	CATAAA	-18	NA	23917131	23920989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195
WTC11_00062122	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11376.0195440526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	23669697	False	NA	NA	False	NA	NA	NA	23917298	23919301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
WTC11_00062123	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_2	414.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23917449	False	NA	27	True	AATAAA	-16	NA	23917704	23919551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23918032_23918439_23918577_23919195
WTC11_00062124	chr3	+	5245	8	FSM	ENSG00000174738.13	ENST00000312521.9	5231	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	55	junction_5	12.2524466527952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTTGGTGTCTAA	23943868	True	NA	5	True	AATAAA	-14	NA	23945271	23980617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23945595_23954536_23954804_23956036_23956126_23959670_23959816_23961976_23962606_23964976_23965163_23967812_23968024_23977222
WTC11_00062125	chr3	+	220	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	-204	393	-204	-393	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTGAAGCCCAAGATC	NA	False	NA	NA	False	NA	NA	NA	25749283	25749503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_25749300_25749500
WTC11_00062131	chr3	+	679	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	-41	32	-1	0	multi-exon	FALSE	canonical	3	50	junction_1	395.370079798662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTTATCTGAAATAAATA	28237542	True	NA	-13	True	NA	NA	NA	28241582	28319741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
WTC11_00062132	chr3	+	551	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	-2	0	0	multi-exon	FALSE	canonical	3	355	junction_1	301	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237577	True	NA	19	True	AATAAA	-15	NA	28241617	28319773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241813_28316332_28316424_28319508
WTC11_00062133	chr3	+	5987	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	-1	23	0	-23	multi-exon	FALSE	canonical	3	636	junction_1	143.206920999728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAGTAAAAAAAAAAAAAA	28237577	True	NA	NA	False	AAAACA	-37	NA	28241617	28325119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
WTC11_00062134	chr3	+	446	3	FSM	ENSG00000187118.14	ENST00000482499.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTTCTTAAATGGGAAA	NA	False	NA	22	True	AATAAA	-18	NA	28316352	28319776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28316424_28316752_28316860_28319508
WTC11_00062136	chr3	+	4634	7	FSM	ENSG00000163513.19	ENST00000295754.10	4530	7	-114	10	-114	-10	multi-exon	FALSE	canonical	3	24	junction_1	12.5918845116827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCTAAATCCATTTGCC	30605266	True	NA	53	True	AATAAA	-44	NA	30606486	30694132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_30606978_30644746_30644916_30650269_30650461_30671637_30672438_30674104_30674247_30688383_30688512_30691419
WTC11_00062137	chr3	+	4699	8	FSM	ENSG00000163513.19	ENST00000359013.4	4605	8	-94	0	-94	0	multi-exon	FALSE	canonical	3	12	junction_2	18.5988808089879	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGCCTCATTTGGTT	30605286	True	NA	63	True	NA	NA	NA	30606506	30694142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_30606978_30623198_30623274_30644746_30644916_30650269_30650461_30671637_30672438_30674104_30674247_30688383_30688512_30691419
WTC11_00062140	chr3	+	3384	2	FSM	ENSG00000197385.6	ENST00000360311.5	3217	2	-45	-122	-45	122	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATTCAAGACAGGCTAA	31981085	True	NA	NA	False	NA	NA	NA	31981704	31991845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_31981903_31988659
WTC11_00062144	chr3	+	822	6	FSM	ENSG00000152642.11	ENST00000428684.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9923054151294	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCGCAGACTTCTGCTGA	32105941	True	NA	NA	False	NA	NA	NA	32106611	32159615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32106759_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567
WTC11_00062150	chr3	+	2818	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-46	0	-3	0	multi-exon	FALSE	canonical	3	227	junction_12	23.3360448159992	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32685116	False	NA	16	True	ATTAAA	-18	NA	32685141	32773875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
WTC11_00062151	chr3	+	857	2	NNC	ENSG00000182973.20	novel	2290	17	NA	NA	0	-22408	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTGCTGTGGATTTT	32678766	True	NA	NA	False	ATTAAA	-7	NA	32685219	32686367	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_32685483_32685773
WTC11_00062152	chr3	+	298	3	FSM	ENSG00000182973.20	ENST00000466103.1	303	3	5	0	5	0	multi-exon	FALSE	canonical	3	6	junction_1	129.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATCAGTTGGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32703867	32708775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32703898_32704810_32704973_32708669
WTC11_00062155	chr3	+	754	2	FSM	ENSG00000182973.20	ENST00000481526.5	756	2	0	2	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAATTCTCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	32764131	32769962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32764810_32769886
WTC11_00062157	chr3	+	10225	4	FSM	ENSG00000206557.6	ENST00000383763.6	8704	4	-1521	0	-1521	0	multi-exon	FALSE	canonical	3	116	junction_1	21.1712593442672	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTGTCTGTGTGATC	32816452	False	NA	19	True	AATAAA	-19	NA	32816475	32897824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32818933_32873817_32873986_32885933_32886069_32890359
WTC11_00062158	chr3	+	6595	7	FSM	ENSG00000170275.15	ENST00000320954.11	6595	7	0	0	0	0	multi-exon	FALSE	canonical	1	287	junction_1	224.696585544942	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTCTATTCTAT	33105374	True	NA	5	True	ATTAAA	-17	NA	33114013	33147773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33129938_33130068_33132554_33132701_33134181_33134266_33142394
WTC11_00062159	chr3	+	1811	6	FSM	ENSG00000170275.15	ENST00000449224.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	388.27443902477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGATAATTGTGAAAAC	33105414	True	NA	15	True	AAGAAA	-12	NA	33114053	33143158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33132554_33132701_33134181_33134266_33142394
WTC11_00062160	chr3	+	320	4	FSM	ENSG00000153558.16	ENST00000461094.5	609	4	289	0	289	0	multi-exon	FALSE	canonical	2	5	junction_2	4.71404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAGATCACGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	33364624	33373618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33364720_33373091_33373161_33373240_33373356_33373577
WTC11_00062162	chr3	+	2820	2	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGTTTGTCTTGTTTT	33444300	True	NA	7	True	AATAGA	-19	NA	33446586	33455304	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_33447138_33453035
WTC11_00062165	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_10	52.0893562838156	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	33789046	True	NA	16	True	AATAAA	-17	NA	33798629	33869703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
WTC11_00062167	chr3	+	3209	11	NIC	ENSG00000144681.11	novel	3067	11	NA	NA	-172	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	12.0813906484312	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGATCTCTTCTTT	36379817	True	NA	22	True	AATAAA	-36	NA	36380330	36548009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_36380755_36443396_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
WTC11_00062178	chr3	+	2608	20	FSM	ENSG00000076242.16	ENST00000458205.6	2608	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.412702139621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	36990513	False	NA	20	True	AATAAA	-20	NA	36993775	37050846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993891_36996618_36996710_36997155_36997301_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
WTC11_00062179	chr3	+	2447	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	-19	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	105.564093221975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	36993260	True	NA	18	True	AATAAA	-18	NA	36993784	37050844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
WTC11_00062182	chr3	+	1495	4	FSM	ENSG00000076242.16	ENST00000673741.1	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	36.0585942907127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCTTATTTAATTTTA	37046741	False	NA	17	True	AATAAA	-17	NA	37046753	37050843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37047684_37048516_37048610_37048903_37049018_37050485
WTC11_00062189	chr3	+	813	4	ISM	ENSG00000144668.12	ENST00000422441.5	2282	16	-9	147912	-9	-147912	5prime_fragment	FALSE	canonical	3	10	junction_1	6.12825877028341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCATGGATTGATTTTT	37451849	True	NA	NA	False	NA	NA	NA	37452105	37481607	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483
WTC11_00062190	chr3	+	2099	20	ISM	ENSG00000144668.12	ENST00000264741.10	7860	28	42361	46013	42361	-41896	internal_fragment	FALSE	canonical	2	6	junction_2	4.64889108988918	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTCTGGAAGAAAAGTC	NA	False	NA	NA	False	AAGAAA	-31	NA	37494501	37777494	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391
WTC11_00062192	chr3	+	961	4	ISM	ENSG00000144668.12	ENST00000264741.10	7860	28	327789	3970	-85	147	3prime_fragment	FALSE	canonical	3	18	junction_3	1.63299316185545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGTGGTGCATATAAAC	NA	False	NA	NA	False	AAGAAA	-25	NA	37779929	37819537	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_37780022_37784976_37785079_37803822_37803943_37818890
WTC11_00062193	chr3	+	3628	7	NIC	ENSG00000144677.15	novel	4640	7	NA	NA	-24	0	intron_retention	FALSE	canonical	1	5	junction_1	53.1057644914582	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	37860148	True	NA	15	True	AATAAA	-15	NA	37861855	37984469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37862279_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741_37980864_37981824
WTC11_00062194	chr3	+	4753	8	FSM	ENSG00000144677.15	ENST00000273179.10	4753	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	30.8901939397061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	37860172	True	NA	15	True	AATAAA	-15	NA	37861879	37984469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37862279_37947056_37947212_37957110_37957144_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
WTC11_00062197	chr3	+	2073	10	FSM	ENSG00000136059.16	ENST00000484717.5	2072	10	-1	0	-1	0	multi-exon	FALSE	canonical	2	7	junction_6	4.09456128281962	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCATGGAGGTGCCAGCC	37993902	True	NA	NA	False	NA	NA	NA	37994151	38002480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089_37998169_37998265_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701
WTC11_00062198	chr3	+	831	5	FSM	ENSG00000136059.16	ENST00000463080.2	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.91547594742265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGGGTTGGGAGGAGA	37999216	False	NA	NA	False	NA	NA	NA	37999231	38003313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167
WTC11_00062200	chr3	+	2850	5	FSM	ENSG00000172936.16	ENST00000396334.8	2850	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	13.3111795119741	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	38138455	False	NA	6	True	AATAAA	-20	NA	38138477	38143022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
WTC11_00062203	chr3	+	2655	5	FSM	ENSG00000172936.16	ENST00000652213.1	2655	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	55.0743815217202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTCTACCTTGGAA	38137035	True	NA	-15	True	AATATA	-27	NA	38138632	38143001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38139029_38139863_38139999_38140387_38140550_38140756_38140849_38141131
WTC11_00062207	chr3	+	3314	2	FSM	ENSG00000172936.16	ENST00000484513.1	3314	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	38137825	False	NA	3	True	AATAAA	-17	NA	38139422	38143019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38140849_38141131
WTC11_00062208	chr3	+	1908	15	FSM	ENSG00000172939.9	ENST00000446845.5	1908	15	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_8	26.76999538777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAAACACATTTAGAA	38160897	True	NA	NA	False	GATAAA	-15	NA	38165504	38250179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38242742_38242779_38246074_38246222_38247667_38247733_38249965
WTC11_00062211	chr3	+	3507	17	FSM	ENSG00000093217.11	ENST00000424034.5	3484	17	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.13677754662425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAGAAAACCTTAA	38346236	True	NA	NA	False	AATAAA	-18	NA	38346784	38414976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38346926_38348549_38348633_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
WTC11_00062214	chr3	+	7440	2	NNC	ENSG00000114739.14	novel	11782	11	NA	NA	12221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	38485648	False	NA	9	True	AATAAA	-16	NA	38485666	38493142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_38492732_38492767
WTC11_00062222	chr3	+	3573	4	FSM	ENSG00000157036.13	ENST00000483749.1	871	4	-484	-2218	-484	161	multi-exon	FALSE	canonical	3	59	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTGTTCAATTTTTT	38500586	False	NA	NA	False	NA	NA	NA	38500677	38526464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38501495_38503614_38503692_38506853_38506969_38523900
WTC11_00062227	chr3	+	839	5	FSM	ENSG00000144659.13	ENST00000431510.1	820	5	-19	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	97.3790916983723	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTCAACCACTTTAGG	39379781	True	NA	NA	False	NA	NA	NA	39383369	39391620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39383794_39389361_39389390_39389494_39389617_39390422_39390508_39391440
WTC11_00062234	chr3	+	1227	5	FSM	ENSG00000168028.14	ENST00000478027.2	1227	5	0	0	0	0	multi-exon	FALSE	canonical	3	5192	junction_1	497.798340194099	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39408189	False	NA	5	True	AATAAA	-16	NA	39408203	39412438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
WTC11_00062235	chr3	+	2058	2	FSM	ENSG00000168028.14	ENST00000495394.1	2058	2	0	0	0	0	multi-exon	FALSE	canonical	3	5827	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	39409416	False	NA	1	True	AATAAA	-12	NA	39410258	39412434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39411778_39411895
WTC11_00062236	chr3	+	5072	17	FSM	ENSG00000170011.14	ENST00000302541.11	5073	17	0	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_12	3.33951250184814	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGTGTGTGCAATTT	39809445	True	NA	NA	False	AGTAAA	-19	NA	39809608	40260320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39809917_39900786_39900927_40044049_40044272_40151047_40151185_40162729_40162811_40166845_40166944_40167158_40167240_40169949_40170094_40182219_40182374_40189825_40190464_40209853_40210094_40233858_40234054_40244445_40244608_40250221_40250327_40250438_40250500_40251880_40252000_40258133
WTC11_00062243	chr3	+	1045	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	-79	0	-8	0	multi-exon	FALSE	canonical	3	36	junction_1	2122.01626760965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	40349245	True	NA	NA	False	NA	NA	NA	40457283	40462168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
WTC11_00062244	chr3	+	796	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	4918	junction_3	250.022498987591	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	40457847	False	NA	12	True	AATAAA	-14	NA	40457874	40462368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
WTC11_00062246	chr3	+	604	4	FSM	ENSG00000188846.14	ENST00000481798.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	5276	junction_3	120.538606079362	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCCAGAAAGCAGCGC	40456727	True	NA	NA	False	AGTAAA	-36	NA	40457931	40462132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457992_40458641_40458737_40461406_40461662_40461938
WTC11_00062248	chr3	+	2301	5	FSM	ENSG00000177842.12	ENST00000420891.5	533	5	-3	-1765	-3	0	multi-exon	TRUE	canonical	3	12	junction_1	6.57647321898295	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	NA	False	NA	5	True	AATAAA	-21	NA	40505988	40517709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40506126_40506303_40506377_40511469_40511597_40512401_40512516_40515859
WTC11_00062249	chr3	+	2042	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	-20	0	-19	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503699	True	NA	5	True	AATAAA	-21	NA	40506019	40517709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40506139_40506303_40506377_40515859
WTC11_00062250	chr3	+	3310	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	17	junction_3	8.5146931829632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	40503699	True	NA	NA	False	NA	NA	NA	40506019	40518736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
WTC11_00062254	chr3	+	5002	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	-2018	488	-1274	0	multi-exon	FALSE	canonical	3	532	junction_15	216.184016265979	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	41197370	41239955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
WTC11_00062255	chr3	+	3321	16	FSM	ENSG00000168036.18	ENST00000644678.1	3321	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	451.473833374895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATTTATCAAACCCT	41199283	True	NA	NA	False	NA	NA	NA	41199418	41239885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
WTC11_00062256	chr3	+	3285	16	FSM	ENSG00000168036.18	ENST00000396183.7	3268	16	-15	-2	0	0	multi-exon	FALSE	canonical	3	784	junction_15	160.374090453816	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCACTCTTTCTTTTT	41199283	True	NA	28	True	ATTAAA	-17	NA	41199418	41240445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
WTC11_00062257	chr3	+	3282	16	FSM	ENSG00000168036.18	ENST00000643031.1	3267	16	-15	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	332.720343031001	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCACTCTTTCTTTTT	41199283	True	NA	28	True	ATTAAA	-17	NA	41199418	41240445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239821
WTC11_00062259	chr3	+	2795	13	FSM	ENSG00000168036.18	ENST00000644138.1	2777	13	-18	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_2	52.3800216367526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTACACAGACATACA	41172972	True	NA	NA	False	AATAAA	-42	NA	41199486	41237196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587
WTC11_00062260	chr3	+	3679	15	FSM	ENSG00000168036.18	ENST00000349496.11	3661	15	-18	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_2	88.4169159177596	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	41172972	True	NA	26	True	ATTAAA	-15	NA	41199486	41240443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
WTC11_00062261	chr3	+	3331	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	-20	-541	0	0	multi-exon	FALSE	canonical	3	23	junction_3	446.693892496584	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCACTCTTTCTTTTT	41172990	True	NA	28	True	ATTAAA	-17	NA	41199504	41240445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
WTC11_00062275	chr3	+	5533	17	FSM	ENSG00000182606.17	ENST00000487159.5	5536	17	0	3	0	-3	multi-exon	TRUE	canonical	2	14	junction_15	46.4919347844333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATACTGTTACATGCC	42013791	False	NA	NA	False	ATTAAA	-15	NA	42013801	42225886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42014118_42087103_42087401_42125419_42125615_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209986_42219493_42219597_42222941
WTC11_00062276	chr3	+	2008	13	FSM	ENSG00000182606.17	ENST00000484786.5	2008	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	26.9200204308986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGCCTAGGCCTCCG	NA	False	NA	NA	False	NA	NA	NA	42087199	42202906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42087401_42125419_42125615_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435
WTC11_00062277	chr3	+	4630	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	-11	1	-11	-1	multi-exon	FALSE	canonical	3	65	junction_1	34.1906419945575	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATTATAGTTTTACTT	42157840	True	NA	NA	False	ATTAAA	-19	NA	42160157	42212622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
WTC11_00062282	chr3	+	3759	3	FSM	ENSG00000114812.13	ENST00000498102.1	3759	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTTGGTTCCCCTGGT	NA	False	NA	9	True	AATAAA	-12	NA	42532865	42537567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42535105_42535342_42535385_42536089
WTC11_00062286	chr3	+	7269	17	FSM	ENSG00000114857.19	ENST00000232978.13	7265	17	-4	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	49.721372102447	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	42592234	True	NA	4	True	ATTAAA	-18	NA	42600681	42648735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42621428_42621517_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643901_42644004_42645887
WTC11_00062301	chr3	+	5205	7	FSM	ENSG00000163788.14	ENST00000296088.12	5188	7	-17	0	11	0	multi-exon	FALSE	canonical	3	23	junction_1	4.11298755975102	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	43285712	True	NA	NA	False	AATAAA	-29	NA	43286522	43351143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_43286676_43299753_43299816_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
WTC11_00062303	chr3	+	731	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	-151	38	-139	-38	multi-exon	FALSE	canonical	3	109	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACCCATTACAGATTAAA	43690702	False	NA	NA	False	TTTAAA	-9	NA	43690740	43699707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_43691040_43699275
WTC11_00062305	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.3639292891539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	43689997	True	NA	20	True	AATAAA	-13	NA	43690937	43722725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
WTC11_00062310	chr3	+	1994	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	4	0	-2	multi-exon	FALSE	canonical	3	24	junction_3	24.9131825880731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGTCTGAGTTCTGTG	44336248	True	NA	7	True	AATAAA	-19	NA	44338118	44359800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
WTC11_00062312	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.0739601136904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	44338364	True	NA	9	True	AATAAA	-21	NA	44338451	44359802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
WTC11_00062313	chr3	+	1064	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	-8	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	23.8746727726266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44338730	False	NA	11	True	AATAAA	-13	NA	44338751	44363037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
WTC11_00062322	chr3	+	2949	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	-14	0	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	19.70786644972	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624127	True	NA	9	True	AATAAA	-19	NA	44625034	44648471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
WTC11_00062326	chr3	+	565	3	FSM	ENSG00000169981.11	ENST00000399560.2	564	3	-1	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCAGACAAGTGATAG	44647215	True	NA	NA	False	AATAAA	-13	NA	44648740	44658878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44648812_44650943_44651260_44658700
WTC11_00062328	chr3	+	2663	4	FSM	ENSG00000169981.11	ENST00000396056.7	2658	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	28	junction_1	2.16024689946929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647201	True	NA	25	True	AATAAA	-23	NA	44648726	44660791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44648835_44650940_44651260_44652556_44652702_44658700
WTC11_00062329	chr3	+	2663	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	-1	-159	0	159	multi-exon	FALSE	canonical	3	28	junction_1	2.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGTCTTAATTTGATT	44647215	True	NA	NA	False	NA	NA	NA	44648740	44660950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44648835_44650940_44651260_44658700
WTC11_00062337	chr3	+	890	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-3	3	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	40	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTACGGTATCTTAATT	44860399	True	NA	15	True	AATAAA	-25	NA	44861900	44865667	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862016_44864196_44864344_44865039
WTC11_00062340	chr3	+	1475	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	-45	-35	-25	0	multi-exon	FALSE	canonical	3	90	junction_8	370.022106603106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGATTCCAGTGGATCA	44966374	True	NA	15	True	AATAAA	-23	NA	44976218	45012668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
WTC11_00062341	chr3	+	1427	7	FSM	ENSG00000075914.13	ENST00000468667.5	831	7	-32	-564	-25	149	multi-exon	FALSE	canonical	3	76	junction_1	542.97626303755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTAAGCACTTCCAGT	44966374	True	NA	NA	False	NA	NA	NA	44976218	45012817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
WTC11_00062342	chr3	+	1647	3	FSM	ENSG00000075914.13	ENST00000486727.1	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGGTATGTCTAGAG	45004142	False	NA	6	True	ATTAAA	-15	NA	45004159	45011470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45005415_45007419_45007576_45011234
WTC11_00062345	chr3	+	10049	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	46.5365447793452	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATGGTATATTGAGTG	45381692	True	NA	13	True	AATAAA	-28	NA	45388560	45554726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
WTC11_00062353	chr3	+	2179	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	-15	0	-15	0	multi-exon	TRUE	canonical	3	12	junction_1	161.294908475128	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	45689200	False	NA	NA	False	NA	NA	NA	45689225	45743804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
WTC11_00062355	chr3	+	3707	20	FSM	ENSG00000211456.13	ENST00000672477.1	3707	20	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	29.9496345456549	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGGTATCATTCATGT	45689113	False	NA	29	True	AATAAA	-18	NA	45689261	45745408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
WTC11_00062365	chr3	+	1956	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAGAAAAGAAAAGATGA	46583871	False	NA	NA	False	AATAAA	-18	NA	46583933	46585889	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46583900_46585900
WTC11_00062368	chr3	+	8768	53	NIC	ENSG00000160796.18	novel	8842	54	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	55	junction_9	51.6314710402013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCTCCGAGTGTGCG	46979611	False	NA	31	True	AATAAA	-21	NA	46979661	47009704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_46979913_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991218_46991305_46991405_46991689_46991839_46991947_46993936_46994021_46994454_46994554_46995031_46995634_46995713_46995847_46995931_46996052_46996270_46996593_46996750_46996834_46996953_46997047_46997258_46997434_46997560_46997695_46998066_46998227_46998462_46998566_46998716_46998880_46998958_46999118_46999314_46999475_46999629_46999716_46999888_47000405_47001000_47001180_47001278_47001439_47001688_47001827_47001919_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004394_47004494_47004591_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007065_47007156_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
WTC11_00062371	chr3	+	677	3	FSM	ENSG00000160796.18	ENST00000475689.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCCGCCGCGAGGAGG	47000935	False	NA	NA	False	NA	NA	NA	47000949	47001969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47001439_47001688_47001827_47001919
WTC11_00062374	chr3	+	1076	6	FSM	ENSG00000160796.18	ENST00000486870.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	13.614697940094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCCAGCTTAGAGGAT	47004607	False	NA	NA	False	NA	NA	NA	47004618	47006262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164
WTC11_00062391	chr3	+	1970	9	FSM	ENSG00000132153.15	ENST00000441384.5	1957	9	-13	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	297.78177307384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTGGCGTTTCCTT	47803113	False	NA	3	True	AATAAA	-17	NA	47803124	47842679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616
WTC11_00062392	chr3	+	3896	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	-9	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	226.582866639438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	47803113	False	NA	20	True	AATAAA	-20	NA	47803124	47850192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00062393	chr3	+	3825	21	NNC	ENSG00000132153.15	novel	3887	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	216.818264913268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	47796725	True	NA	20	True	AATAAA	-20	NA	47803154	47850192	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_47803213_47805325_47805421_47810572_47810712_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00062394	chr3	+	4551	23	NIC	ENSG00000132153.15	novel	3887	23	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	191.952285092067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47802906	False	NA	15	True	AATAAA	-15	NA	47802916	47850187	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47824766_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00062395	chr3	+	3996	23	FSM	ENSG00000132153.15	ENST00000348968.8	3994	23	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_4	201.790687111568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTCCACTAGGGGCT	47796735	True	NA	23	True	AATAAA	-23	NA	47803164	47850195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962_47816129_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00062397	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	86.0122730260694	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47818996	True	NA	15	True	AATAAA	-15	NA	47825027	47850187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00062402	chr3	+	1700	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	-23	0	-23	0	multi-exon	FALSE	canonical	3	108	junction_3	254.664921459989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	48224128	True	NA	NA	False	AATAAA	-26	NA	48241076	48287627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
WTC11_00062403	chr3	+	617	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	-24	0	-23	0	multi-exon	FALSE	canonical	3	194	junction_3	214.233517452335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	48224128	True	NA	17	True	AATAAA	-19	NA	48241076	48299253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
WTC11_00062404	chr3	+	535	3	NIC	ENSG00000164048.14	novel	593	4	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	91	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTCATCTTTGTATT	48224153	True	NA	13	True	AATAAA	-15	NA	48241101	48299249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_48241215_48260812_48260940_48298954
WTC11_00062405	chr3	+	5571	4	ISM	ENSG00000164048.14	ENST00000440261.6	917	5	23	13408	0	2232	5prime_fragment	FALSE	canonical	3	104	junction_3	256.546292118986	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAACTTTTGCCTGAGT	48224180	True	NA	8	True	AGTAAA	-17	NA	48241128	48273222	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917
WTC11_00062406	chr3	+	4703	5	FSM	ENSG00000164048.14	ENST00000448461.5	4703	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	285.175713376858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	48224180	True	NA	NA	False	AATAAA	-26	NA	48241128	48287627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914_48270970_48286245
WTC11_00062409	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	17596	junction_1	881	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	48325366	True	NA	9	True	ATTAAA	-14	NA	48440283	48444203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48440459_48440540_48440629_48443847
WTC11_00062418	chr3	+	537	6	FSM	ENSG00000177479.20	ENST00000488963.5	517	6	-22	2	3	0	multi-exon	FALSE	canonical	0	0	junction_3	308.041295932867	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTCTATTACTTGAA	48909205	True	NA	NA	False	AAAACA	-2	NA	48918825	48964982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48945135_48945182_48961611_48961680_48964918
WTC11_00062423	chr3	+	2293	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	-15	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	120.151060518624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909200	True	NA	-56	True	NA	NA	NA	48918820	48983620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
WTC11_00062424	chr3	+	5459	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	-51	-496	-30	496	multi-exon	FALSE	canonical	3	335	junction_2	92.1286540056289	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGGGACCTCACAAAG	NA	False	NA	NA	False	NA	NA	NA	48918790	48986878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
WTC11_00062425	chr3	+	1419	3	ISM	ENSG00000177479.20	ENST00000430423.5	753	6	31	38482	-1	713	5prime_fragment	FALSE	canonical	3	335	junction_2	220.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTAAGGTGTGCCTTG	48909231	True	NA	5	True	AATAAA	-22	NA	48918851	48928669	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_48918999_48922747_48922812_48927461
WTC11_00062427	chr3	+	2864	18	NNC	ENSG00000177479.20	novel	2278	17	NA	NA	-1	500	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	230.150815605497	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCCAGTATTCAAGTG	48909231	True	NA	16	True	AATAAA	-24	NA	48918851	48984179	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48918999_48922747_48922812_48924717_48924840_48927464_48927814_48945135_48945182_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
WTC11_00062428	chr3	+	1550	4	ISM	ENSG00000177479.20	ENST00000449376.5	2278	17	12	54946	0	718	5prime_fragment	FALSE	canonical	3	285	junction_3	215.7884766772	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGTGCCTTGTATGA	48909227	True	NA	10	True	AATAAA	-27	NA	48918847	48928674	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461
WTC11_00062431	chr3	+	2778	15	FSM	ENSG00000177479.20	ENST00000452385.5	2778	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	198.941381993259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTAGCTGTTTTACTT	48926706	False	NA	3	True	AATAAA	-19	NA	48926717	48983679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48927814_48945135_48945182_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
WTC11_00062436	chr3	+	2036	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	-303	38	0	0	multi-exon	FALSE	canonical	1	39	junction_6	26.9278550018378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	48989622	False	NA	27	True	AATAAA	-17	NA	48989937	49007115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
WTC11_00062437	chr3	+	5285	4	FSM	ENSG00000178467.18	ENST00000484115.5	5285	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	7.25718035235908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	48989622	False	NA	27	True	AATAAA	-17	NA	48989937	49007115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48990915_49001437_49001629_49002499_49006188_49006686
WTC11_00062441	chr3	+	4401	6	FSM	ENSG00000178252.19	ENST00000395474.7	4401	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	63.5213349985656	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGTCTATGCCTCACC	NA	False	NA	15	True	AATAAA	-20	NA	49007061	49015953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
WTC11_00062443	chr3	+	3922	6	FSM	ENSG00000178252.19	ENST00000452875.5	3916	6	-6	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	243.10935810865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGCTCAGTGGAGGG	48997492	True	NA	95	True	NA	NA	NA	49007390	49015589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49007532_49011420_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
WTC11_00062444	chr3	+	3363	6	FSM	ENSG00000178252.19	ENST00000448293.5	3377	6	14	0	-3	0	multi-exon	FALSE	canonical	2	5	junction_1	248.964575793425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGGGCTGTCTGTGCCC	49007608	False	NA	NA	False	NA	NA	NA	49007621	49015347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49007660_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
WTC11_00062447	chr3	+	777	3	FSM	ENSG00000178057.15	ENST00000480392.1	769	3	-8	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	61.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAACTGACCTGCTGAC	49017566	True	NA	-92	True	AATGAA	-4	NA	49022112	49023176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49022222_49022345_49022539_49022701
WTC11_00062455	chr3	+	5600	3	FSM	ENSG00000173402.12	ENST00000515359.6	5576	3	-27	3	-27	0	multi-exon	FALSE	canonical	3	15	junction_1	212	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTTGCATCTGGGCATC	49468596	True	NA	NA	False	AATAAA	-20	NA	49468675	49535615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49469056_49510418_49510820_49530796
WTC11_00062458	chr3	+	5522	3	FSM	ENSG00000173402.12	ENST00000308775.7	5387	3	-135	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	69.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTTGCATCTGGGCATC	49462161	True	NA	NA	False	AATAAA	-20	NA	49470131	49535615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49510418_49510820_49530796
WTC11_00062459	chr3	+	5662	3	FSM	ENSG00000173402.12	ENST00000539901.5	5665	3	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	219.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTTGCATCTGGGCATC	49462161	True	NA	NA	False	AATAAA	-20	NA	49470131	49535615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470574_49510418_49510820_49530796
WTC11_00062473	chr3	+	544	4	FSM	ENSG00000164068.16	ENST00000454491.5	531	4	-13	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	62.1128006130781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGAAAGCCAGGGT	49686720	True	NA	NA	False	NA	NA	NA	49689543	49697204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49689823_49691129_49691248_49691424_49691510_49697142
WTC11_00062474	chr3	+	4506	39	FSM	ENSG00000164068.16	ENST00000457726.5	4506	39	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_27	43.4164271858531	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGCCCTGGCCCTT	49686720	True	NA	13	True	ATTAAA	-14	NA	49689543	49721527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705187_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712893_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
WTC11_00062475	chr3	+	5903	35	FSM	ENSG00000164068.16	ENST00000487805.6	5882	35	-21	0	0	0	multi-exon	FALSE	canonical	1	3	junction_20	46.1257495883428	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGCCCTGGCCCTT	49686720	True	NA	13	True	ATTAAA	-14	NA	49689543	49721527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49705081_49705187_49705533_49706066_49706790_49706899_49712478_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
WTC11_00062481	chr3	+	3630	20	NIC	ENSG00000004534.15	novel	3630	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_5	210.361303752243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928699	True	NA	8	True	AATAAA	-15	NA	49940073	50077247	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062482	chr3	+	3994	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	15	1	-7	0	multi-exon	TRUE	canonical	3	38	junction_2	221.07606722574	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928681	True	NA	8	True	AATAAA	-15	NA	49940055	50077247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062483	chr3	+	2209	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	51	0	-5	0	multi-exon	FALSE	canonical	3	125	junction_2	196.273048009654	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928683	True	NA	10	True	AATAAA	-17	NA	49940057	50077249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062484	chr3	+	2405	20	NIC	ENSG00000004534.15	novel	4010	21	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	221.750427457451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATCTTTTTGTTATTT	49928718	True	NA	7	True	AATAAA	-14	NA	49940092	50077246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062485	chr3	+	2367	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	-44	1	-5	0	multi-exon	FALSE	canonical	3	24	junction_2	227.791686567214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928683	True	NA	8	True	AATAAA	-15	NA	49940057	50077247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062487	chr3	+	3640	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	-10	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	204.975608304988	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928765	True	NA	10	True	AATAAA	-17	NA	49940139	50077249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062488	chr3	+	4324	20	FSM	ENSG00000004534.15	ENST00000454079.5	4324	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	226.711868829455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928765	True	NA	8	True	AATAAA	-15	NA	49940139	50077247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062491	chr3	+	1448	7	ISM	ENSG00000004534.15	ENST00000266022.9	3630	21	121411	2	1863	0	3prime_fragment	FALSE	canonical	3	705	junction_1	48.2887725621138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	50061541	False	NA	8	True	AATAAA	-15	NA	50061560	50077247	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00062513	chr3	+	2600	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	-388	7	-388	1	multi-exon	FALSE	canonical	3	1078	junction_1	62.4558594128685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGAACTGATGGGTATTC	50235787	False	NA	8	True	AATAAA	-21	NA	50235815	50259355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
WTC11_00062523	chr3	+	1225	4	FSM	ENSG00000114395.11	ENST00000232508.9	1225	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350080	True	NA	12	True	AGTAAA	-15	NA	50350844	50354069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50350985_50351342_50351561_50352008_50352047_50353240
WTC11_00062525	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	50350093	True	NA	-25	True	NA	NA	NA	50350857	50354032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50351561_50352008_50352047_50353240
WTC11_00062527	chr3	+	1012	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	-13	5	-13	-5	multi-exon	FALSE	canonical	2	4	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTTGTTGTCTGAGG	50365237	True	NA	3	True	AATAAA	-13	NA	50365360	50368192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50365941_50366296_50366332_50367795
WTC11_00062528	chr3	+	16839	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	154	0	-154	multi-exon	FALSE	canonical	3	33	junction_1	13.2079521501253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTTTTTTTCCTTC	50568999	True	NA	NA	False	NA	NA	NA	50569521	50596012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
WTC11_00062532	chr3	+	1172	10	FSM	ENSG00000114738.11	ENST00000430409.5	1160	10	-13	1	-13	-1	multi-exon	FALSE	canonical	3	102	junction_1	81.0456356735413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGGCTCTGCCTCAG	50610892	True	NA	NA	False	NA	NA	NA	50617117	50647203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122
WTC11_00062533	chr3	+	2578	11	FSM	ENSG00000114738.11	ENST00000621469.5	2537	11	-44	3	-24	0	multi-exon	TRUE	canonical	3	102	junction_1	77.7818102129283	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	50617086	False	NA	13	True	AATAAA	-16	NA	50617106	50649288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
WTC11_00062534	chr3	+	2519	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	-19	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	42.8154177837844	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	50610925	True	NA	13	True	AATAAA	-16	NA	50617150	50649288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
WTC11_00062536	chr3	+	1257	8	NNC	ENSG00000088538.13	novel	9069	53	NA	NA	-74	-302727	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	15.3383606073938	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGCCACTTACAGTAT	50674842	False	NA	NA	False	AATAAA	-22	NA	50674852	51081471	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51081174
WTC11_00062537	chr3	+	3331	3	NNC	ENSG00000088538.13	novel	9069	53	NA	NA	704546	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	1.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGAATTCACTGAATG	NA	False	NA	10	True	ATTAAA	-20	NA	51379472	51384198	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_51379572_51380124_51380208_51381049
WTC11_00062539	chr3	+	846	5	FSM	ENSG00000145050.19	ENST00000446668.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	389.727067959104	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCTGTTGCTGGTGT	51376069	False	NA	-65	True	NA	NA	NA	51385356	51389262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51385437_51386207_51386336_51386908_51387047_51387736_51387879_51388904
WTC11_00062546	chr3	+	9967	22	FSM	ENSG00000164080.14	ENST00000409535.6	9776	22	-198	7	-198	0	multi-exon	TRUE	canonical	3	11	junction_1	9.68014542346866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGTGTTGTTTGATC	51536072	False	NA	12	True	AATAAA	-13	NA	51541381	51668660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
WTC11_00062548	chr3	+	1373	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	-59	6	18	0	multi-exon	FALSE	canonical	3	55	junction_1	46.3815696155272	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	51669471	True	NA	5	True	AATAAA	-22	NA	51671192	51704317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
WTC11_00062549	chr3	+	1556	6	NIC	ENSG00000164081.13	novel	1488	6	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	73.3741098753504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	51669471	True	NA	5	True	AATAAA	-22	NA	51671192	51704317	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_51671289_51672209_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
WTC11_00062550	chr3	+	1451	6	FSM	ENSG00000164081.13	ENST00000457573.5	1448	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	8	junction_1	72.6377312421031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669450	True	NA	10	True	AATAAA	-27	NA	51671171	51704322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51671289_51672340_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
WTC11_00062558	chr3	+	1473	15	FSM	ENSG00000243989.9	ENST00000404366.7	1473	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	94.2394096253293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACACTCGTGGAGCAAG	51981506	True	NA	36	True	AATAAA	-36	NA	51983476	51989195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983585_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
WTC11_00062565	chr3	+	2426	12	FSM	ENSG00000023330.15	ENST00000394965.6	2430	12	4	0	4	0	multi-exon	FALSE	canonical	2	8	junction_2	114.525178580632	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	52196102	True	NA	33	True	AATAAA	-18	NA	52198097	52214327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52198256_52198671_52198849_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
WTC11_00062566	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6280697340678	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	52196136	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
WTC11_00062567	chr3	+	2634	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	-259	0	259	multi-exon	FALSE	canonical	3	78	junction_2	100.185695354771	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGCTCTGGTAATGGC	52196164	True	NA	NA	False	AATAAA	-12	NA	52198159	52214586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
WTC11_00062581	chr3	+	2116	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	-521	-1019	-145	1011	multi-exon	FALSE	canonical	3	21	junction_4	9.90896059130321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTGAACATGTGC	52409122	True	NA	25	True	AATAAA	-25	NA	52410514	52415855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
WTC11_00062583	chr3	+	3181	13	FSM	ENSG00000010322.16	ENST00000488380.5	3168	13	-13	0	0	0	multi-exon	FALSE	canonical	3	247	junction_10	30.3694839527371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	52446179	True	NA	6	True	AATAAA	-16	NA	52455603	52481910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183
WTC11_00062584	chr3	+	2602	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	-13	0	0	0	multi-exon	TRUE	canonical	3	30	junction_13	77.5970474641138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	52446179	True	NA	10	True	AATAAA	-20	NA	52455603	52481914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
WTC11_00062590	chr3	+	470	2	FSM	ENSG00000168273.8	ENST00000482728.1	456	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	14	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	52534291	False	NA	22	True	AATAAA	-18	NA	52534510	52540526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52534878_52540423
WTC11_00062592	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	52531366	True	NA	21	True	AATAAA	-17	NA	52536601	52540525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52536774_52540423
WTC11_00062593	chr3	+	264	2	FSM	ENSG00000163938.17	ENST00000468885.1	263	2	-14	13	0	-13	multi-exon	FALSE	canonical	3	1465	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGACCATGGGCACAAG	52665059	True	NA	NA	False	NA	NA	NA	52686015	52686942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52686106_52686768
WTC11_00062596	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	373.901329339216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	52665059	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
WTC11_00062598	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	154.638345023087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	52665092	True	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
WTC11_00062617	chr3	+	2206	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	-18	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	47.7144282860716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	56552419	True	NA	NA	False	NA	NA	NA	56557209	56570671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
WTC11_00062618	chr3	+	3051	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	-9	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	34.3838499145761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	56552419	True	NA	8	True	AATAAA	-22	NA	56557209	56621808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
WTC11_00062624	chr3	+	2447	5	FSM	ENSG00000180376.17	ENST00000480884.5	2447	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	16.6038399173203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	18	True	AATAAA	-32	NA	56615868	56621818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
WTC11_00062625	chr3	+	2783	3	FSM	ENSG00000180376.17	ENST00000476142.1	2783	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTACTTGTTCTATACA	NA	False	NA	-38	True	ATTAAA	-24	NA	56617100	56621762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56619528_56619776_56619902_56621531
WTC11_00062627	chr3	+	6072	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	-3	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	24.1588657360149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	57222694	True	NA	31	True	AATAAA	-35	NA	57227725	57273471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
WTC11_00062628	chr3	+	2217	20	FSM	ENSG00000157500.12	ENST00000482800.5	2217	20	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	25.010247207374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAGGTTGCAATGAGCC	57222757	True	NA	NA	False	NA	NA	NA	57227788	57268021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741
WTC11_00062629	chr3	+	383	4	FSM	ENSG00000157500.12	ENST00000468342.1	419	4	0	36	0	-36	multi-exon	FALSE	canonical	3	236	junction_2	14.613540144522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTAGCTTTTATTTT	57222807	True	NA	NA	False	ATTAAA	-23	NA	57227838	57238169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044
WTC11_00062659	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	21.1122806693575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237438	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
WTC11_00062662	chr3	+	7701	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	284	0	-284	multi-exon	FALSE	canonical	3	53	junction_1	80.7053901545615	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCATTTAAATTCAAAAATC	58304703	True	NA	NA	False	NA	NA	NA	58306261	58324411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
WTC11_00062664	chr3	+	1382	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_1	86.4363927984041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	58304751	False	NA	NA	False	NA	NA	NA	58306309	58318472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
WTC11_00062666	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	93.7879923017867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	58305568	True	NA	8	True	NA	NA	NA	58306519	58320193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
WTC11_00062673	chr3	+	2171	8	FSM	ENSG00000168297.16	ENST00000459676.6	2171	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.5602843476458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATCTTGTATAATTAG	58397124	False	NA	NA	False	NA	NA	NA	58397137	58414527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900
WTC11_00062676	chr3	+	2425	2	FSM	ENSG00000168301.13	ENST00000355076.6	2425	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTTATTGATTATT	58496271	False	NA	18	True	AATAAA	-21	NA	58497772	58502360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58498783_58500945
WTC11_00062678	chr3	+	9357	30	FSM	ENSG00000144724.20	ENST00000474889.6	9357	30	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	80.6650861504673	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTGTTGAGCATTT	61547521	True	NA	6	True	AATAAA	-18	NA	61561570	62297609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_61562373_61748877_61748983_61989624_61989805_62003348_62003498_62078162_62078259_62132601_62132669_62157066_62157225_62167970_62168164_62191468_62191654_62195061_62195171_62201504_62201555_62203172_62203951_62218850_62218984_62231224_62231312_62243806_62243899_62255123_62255216_62262797_62262895_62267409_62267493_62267684_62267820_62269034_62269170_62271382_62271556_62272945_62273082_62273697_62273845_62275872_62275967_62276971_62277049_62277550_62277680_62281562_62281710_62282726_62282870_62292420_62292557_62293160
WTC11_00062681	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	76.3098126062435	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	62318101	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
WTC11_00062685	chr3	+	2053	9	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	-79	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_6	15.9643156759067	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62947962	True	NA	17	True	AATAAA	-17	NA	62950350	63125062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
WTC11_00062686	chr3	+	478	2	FSM	ENSG00000244342.5	ENST00000497573.1	767	2	160	129	160	55	multi-exon	FALSE	canonical	3	44	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATTTCCTATTGACC	NA	False	NA	NA	False	NA	NA	NA	63106134	63113766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_63106423_63113576
WTC11_00062693	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	67.0571895225759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	66217988	True	NA	97	True	AATAAA	-18	NA	66221000	66378923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
WTC11_00062706	chr3	+	1901	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGATTTCAAGTTTAAA	72979199	False	NA	50	True	TTTAAA	-42	NA	72979213	72981114	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_72979200_72981100
WTC11_00062709	chr3	+	4972	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	-15	0	-7	0	multi-exon	FALSE	canonical	3	759	junction_7	34.8568501158667	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	72977814	True	NA	12	True	AATAAA	-16	NA	72996795	73069198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
WTC11_00062718	chr3	+	1550	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	-220	14	-83	0	multi-exon	FALSE	canonical	2	14	junction_3	9.26498785752038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672158	False	NA	15	True	AATAAA	-20	NA	75672170	75679300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
WTC11_00062725	chr3	+	805	4	FSM	ENSG00000185008.17	ENST00000490534.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.68178700572909	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGGAGTATATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77634924	77646265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_77635044_77642670_77642944_77644703_77644905_77646053
WTC11_00062728	chr3	+	918	3	NIC	ENSG00000175161.14	novel	1006	2	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCAACACATTGACTT	84956704	True	NA	2	True	ATTAAA	-14	NA	84958995	84960438	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_84959493_84959589_84959669_84960096
WTC11_00062735	chr3	+	548	4	FSM	ENSG00000175105.8	ENST00000623596.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	8.2192186706253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88086319	88129055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_88086403_88113114_88113197_88126133_88126270_88128808
WTC11_00062736	chr3	+	8074	5	ISM	ENSG00000175105.8	ENST00000636215.2	6460	9	67325	0	40260	0	3prime_fragment	FALSE	canonical	3	19	junction_1	6.10327780786685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	NA	False	NA	4	True	AATAAA	-17	NA	88126579	88144660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
WTC11_00062738	chr3	+	2390	3	NNC	ENSG00000179021.10	novel	2414	3	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	3	33	junction_2	47.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	88148253	True	NA	18	True	AATAAA	-29	NA	88149979	88157965	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_88150186_88153229_88153472_88156023
WTC11_00062743	chr3	+	3593	11	FSM	ENSG00000169379.17	ENST00000335438.7	3659	11	0	66	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.1629205281719	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATACTTTTATTCTTA	93979578	True	NA	-61	True	ATTAAA	-16	NA	93980189	94055213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_93980483_93995873_93995945_93996562_93996685_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
WTC11_00062746	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4.3081318457076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	94062369	True	NA	13	True	AATAAA	-16	NA	94063060	94131832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
WTC11_00062753	chr3	+	10799	22	FSM	ENSG00000080200.10	ENST00000389622.7	10779	22	-20	0	-20	0	multi-exon	FALSE	canonical	3	9	junction_1	13.7758209421575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	97820078	True	NA	29	True	AATAAA	-34	NA	97821990	97944984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_97822356_97843194_97843262_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
WTC11_00062754	chr3	+	657	5	FSM	ENSG00000064225.13	ENST00000489112.5	804	5	94	53	-39	-53	multi-exon	FALSE	canonical	3	9	junction_1	19.6770805761424	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGTAGTATTCTTAC	98732303	False	NA	NA	False	NA	NA	NA	98732329	98772916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98732533_98756368_98756541_98768429_98768530_98770878_98770957_98772812
WTC11_00062760	chr3	+	4054	18	FSM	ENSG00000036054.13	ENST00000486274.5	4054	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	86.3723331327564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256170	True	NA	22	True	AATAAA	-19	NA	100261063	100325238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100261546_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
WTC11_00062770	chr3	+	1714	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	64.2168634826987	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491971	True	NA	19	True	AATAAA	-25	NA	100492618	100577444	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
WTC11_00062772	chr3	+	2081	8	FSM	ENSG00000114354.15	ENST00000674645.1	1960	8	-122	1	-10	0	multi-exon	FALSE	canonical	3	238	junction_6	183.213937621502	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	100709130	False	NA	11	True	AATAAA	-14	NA	100709306	100748963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
WTC11_00062773	chr3	+	1827	8	FSM	ENSG00000114354.15	ENST00000490574.6	1816	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	226	junction_1	185.66845588361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709262	True	NA	12	True	AATAAA	-15	NA	100709283	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00062774	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	293.599199242638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709115	False	NA	12	True	AATAAA	-15	NA	100709352	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
WTC11_00062775	chr3	+	1967	8	FSM	ENSG00000114354.15	ENST00000675958.1	1967	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	257.340241703469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100708048	False	NA	12	True	AATAAA	-15	NA	100709428	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
WTC11_00062776	chr3	+	5864	7	FSM	ENSG00000114354.15	ENST00000676010.1	5864	7	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	76.329148356895	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709237	False	NA	12	True	AATAAA	-15	NA	100709439	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100736717_100744832_100744932_100748148
WTC11_00062777	chr3	+	1907	8	FSM	ENSG00000114354.15	ENST00000240851.9	1907	8	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	74.1484996476665	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100708712	True	NA	12	True	AATAAA	-15	NA	100709493	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00062778	chr3	+	2041	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	-37	1	-37	0	multi-exon	FALSE	canonical	3	40	junction_1	248.679204878043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	100709668	True	NA	11	True	AATAAA	-14	NA	100709932	100748963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00062779	chr3	+	3413	2	FSM	ENSG00000114354.15	ENST00000481203.1	3271	2	-142	0	-142	0	multi-exon	FALSE	canonical	3	762	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	100742300	False	NA	11	True	AATAAA	-14	NA	100742333	100748963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100744932_100748148
WTC11_00062785	chr3	+	2056	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	-28	0	-14	0	multi-exon	FALSE	canonical	3	74	junction_1	1195.04793023358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	101537371	True	NA	15	True	AATAAA	-15	NA	101574165	101594437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
WTC11_00062787	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	101537424	True	NA	21	True	AGTAAA	-27	NA	101574218	101593251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101574280_101590214_101590271_101592626
WTC11_00062798	chr3	+	3923	12	FSM	ENSG00000144802.11	ENST00000326172.9	3923	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	11.4876865446773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTTACATGCATT	101847789	True	NA	6	True	AATAAA	-15	NA	101849513	101861022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101849918_101852084_101852225_101852737_101852769_101852885_101852990_101853090_101853864_101854577_101854684_101855061_101855209_101855394_101855459_101855732_101855903_101857072_101857184_101857291_101857460_101859317
WTC11_00062804	chr3	+	5474	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	45	0	1	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	107240519	True	NA	NA	False	NA	NA	NA	107240708	107251102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_107241088_107246007
WTC11_00062806	chr3	+	9014	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	-5	0	-4	0	multi-exon	FALSE	canonical	2	16	junction_13	13.3411453469914	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	107518859	True	NA	22	True	AATAAA	-34	NA	107522956	107811339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
WTC11_00062819	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	30.564810034691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	111855384	True	NA	4	True	ATTAAA	-12	NA	111859795	111976247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
WTC11_00062822	chr3	+	2620	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	-16	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	15.2704780540755	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	111975480	True	NA	21	True	AATAAA	-24	NA	111979009	111993368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
WTC11_00062824	chr3	+	1176	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	9	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	111999134	False	NA	2	True	AATAAA	-14	NA	111999176	112013881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
WTC11_00062830	chr3	+	2204	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	-680	0	0	multi-exon	FALSE	canonical	3	34	junction_1	129.364364833941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328560	True	NA	20	True	ATTAAA	-16	NA	112333155	112362812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
WTC11_00062831	chr3	+	2019	5	FSM	ENSG00000091972.18	ENST00000383681.7	1997	5	-22	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	84.0089280969588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACAATTAAAAGTGTTG	112328560	True	NA	-8	True	AGTAAA	-4	NA	112333155	112362784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112344961_112345289_112347557_112347831_112349711_112349820_112361542
WTC11_00062832	chr3	+	2039	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	-22	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	117.067021402272	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	112328560	True	NA	17	True	ATTAAA	-13	NA	112333155	112362809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
WTC11_00062833	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	81.6465553468118	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328560	True	NA	20	True	ATTAAA	-16	NA	112333155	112362812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
WTC11_00062840	chr3	+	4380	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	-16	2	-8	-2	multi-exon	FALSE	canonical	3	212	junction_3	30.8526966226437	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCGAAGTTCTGATAT	112558399	True	NA	NA	False	AATAAA	-17	NA	112562028	112585577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
WTC11_00062844	chr3	+	1794	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	-7	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_1	49.2817156763033	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	112988754	True	NA	-31	True	ATTAAA	-13	NA	112990977	113001935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
WTC11_00062856	chr3	+	6332	5	FSM	ENSG00000184307.17	ENST00000638807.2	6346	5	0	14	0	-5	multi-exon	FALSE	canonical	3	22	junction_1	12.5797456254091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAAAACTTAAGCTTTG	113947980	False	NA	3	True	AATAAA	-6	NA	113948012	113963359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113948191_113948685_113948964_113953699_113954411_113956338_113956507_113958362
WTC11_00062865	chr3	+	3618	9	NIC	ENSG00000151576.10	novel	3844	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	75.8777800149688	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	114051711	True	NA	15	True	AATAAA	-20	NA	114056781	114088349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_114056865_114065236_114065279_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
WTC11_00062876	chr3	+	729	3	FSM	ENSG00000113845.10	ENST00000493694.1	710	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	14	junction_1	294	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCACTCTTTGGTCAG	119489202	True	NA	-55	True	NA	NA	NA	119498527	119523823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119498928_119517204_119517316_119523605
WTC11_00062877	chr3	+	1208	6	FSM	ENSG00000113845.10	ENST00000492164.5	725	6	-47	-436	-19	0	multi-exon	FALSE	canonical	1	3	junction_1	235.936940727814	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	119489202	True	NA	14	True	AATAAA	-21	NA	119498527	119524066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119498928_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
WTC11_00062884	chr3	+	908	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	28	3	10	-3	multi-exon	FALSE	canonical	3	13	junction_3	2.92574776766556	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGTTTTATCGTACTC	119702886	True	NA	NA	False	AATAAA	-19	NA	119703060	119715931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
WTC11_00062907	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	31.3687120193036	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063810	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
WTC11_00062909	chr3	+	395	4	FSM	ENSG00000065485.20	ENST00000472319.5	395	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	108.333846152632	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGTTACGATCTCAG	NA	False	NA	NA	False	NA	NA	NA	123124065	123146258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123124158_123124271_123124344_123145521_123145593_123146098
WTC11_00062919	chr3	+	2362	6	FSM	ENSG00000114491.14	ENST00000479719.5	2340	6	-22	0	-3	0	multi-exon	TRUE	canonical	1	9	junction_3	164.992848329859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725847	True	NA	NA	False	NA	NA	NA	124730429	124744757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124730628_124735092_124735247_124737567_124738444_124740023_124740200_124742151_124742267_124743914
WTC11_00062920	chr3	+	6674	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	-22	0	-3	0	multi-exon	FALSE	canonical	3	400	junction_5	20.3921553544494	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	124725847	True	NA	30	True	AATAGA	-18	NA	124730429	124749273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
WTC11_00062925	chr3	+	1032	8	NIC	ENSG00000159685.11	novel	1000	8	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	157.851648256022	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCAGTCGTTGACTCAC	126704170	False	NA	8	True	AATAAA	-13	NA	126704181	126960391	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852643_126852731_126914679_126914751_126957415_126957552_126960195
WTC11_00062930	chr3	+	9486	32	FSM	ENSG00000114554.12	ENST00000393409.3	9309	32	-177	0	-177	0	multi-exon	FALSE	canonical	3	82	junction_1	68.3670999370174	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGCTCCAGGTTTTC	126982904	False	NA	15	True	AATAAA	-39	NA	126982937	127037389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_126983288_126988520_126989788_126991383_126991567_127003329_127003471_127004610_127004712_127004884_127005009_127005089_127005244_127006078_127006179_127007798_127007914_127011957_127012159_127014019_127014117_127014181_127014376_127014477_127014630_127014710_127014832_127015183_127015321_127016516_127016685_127016943_127017038_127017424_127017665_127017748_127017893_127018293_127018529_127020201_127020345_127022084_127022342_127022751_127022819_127027939_127028087_127028180_127028341_127028992_127029097_127029439_127029537_127029873_127030065_127030242_127030413_127032386_127032600_127032685_127032837_127033921
WTC11_00062938	chr3	+	1938	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	-23	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.93699157959252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	127672501	True	NA	11	True	AATAAA	-20	NA	127672934	127680920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
WTC11_00062939	chr3	+	1979	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	-17	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	6.91626421876736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	127672501	True	NA	17	True	AATAAA	-26	NA	127672934	127680926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
WTC11_00062943	chr3	+	3680	13	NNC	ENSG00000058262.10	novel	3568	12	NA	NA	0	18331	intron_retention	FALSE	non_canonical	0	0	junction_12	286.701209159176	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGAGGTGATG	128039897	True	NA	NA	False	NA	NA	NA	128052425	128090014	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475_128071680_128089909
WTC11_00062945	chr3	+	3172	5	FSM	ENSG00000075785.14	ENST00000675712.1	3182	5	10	0	10	0	multi-exon	FALSE	canonical	3	1263	junction_4	74.5519952784632	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	128703216	True	NA	11	True	AATAAA	-18	NA	128726145	128814796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128807672_128813326
WTC11_00062947	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_5	68.6684789404862	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	128703253	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
WTC11_00062961	chr3	+	2904	17	FSM	ENSG00000177646.20	ENST00000679715.1	3748	17	844	0	844	0	multi-exon	FALSE	canonical	3	204	junction_4	19.0983269882469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCCTTTGCTGTACTT	128880121	False	NA	22	True	TATAAA	-19	NA	128883966	128913109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
WTC11_00062964	chr3	+	3089	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	-11	0	-11	0	multi-exon	TRUE	canonical	2	379	junction_5	66.3488517784983	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	129240778	True	NA	26	True	AATAAA	-20	NA	129249594	129277773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
WTC11_00062965	chr3	+	586	4	FSM	ENSG00000181789.14	ENST00000504547.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_1	30.3424894606007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACCCGTATTCTACAT	129260216	False	NA	NA	False	NA	NA	NA	129260226	129265675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129260401_129260618_129260808_129263903_129264000_129265548
WTC11_00062966	chr3	+	545	3	FSM	ENSG00000181789.14	ENST00000513410.1	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCATAGAAAAGCATGAAAAA	129263897	False	NA	NA	False	AAAAAG	-6	NA	129263910	129267235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129264000_129265548_129265793_129267023
WTC11_00062967	chr3	+	965	6	FSM	ENSG00000183624.14	ENST00000509042.5	948	6	-17	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_4	207.417453460407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTCCTAGAGCAATGG	129278776	False	NA	NA	False	NA	NA	NA	129278810	129304751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129278906_129279709_129279916_129290678_129290805_129298353_129298536_129301949_129302143_129304588
WTC11_00062969	chr3	+	2509	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	195.255743975832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275368	True	NA	NA	False	AATAAA	-15	NA	129278845	129306186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
WTC11_00062971	chr3	+	2773	7	FSM	ENSG00000183624.14	ENST00000502878.6	1952	7	-76	-745	0	0	multi-exon	FALSE	canonical	0	0	junction_5	209.512927206573	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275402	True	NA	NA	False	AATAAA	-15	NA	129278879	129306186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129279204_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
WTC11_00062975	chr3	+	3841	29	FSM	ENSG00000163913.14	ENST00000347300.6	3841	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.4976450697336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	NA	False	NA	18	True	AATAAA	-18	NA	129440124	129520351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00062976	chr3	+	3589	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	-20	0	0	0	multi-exon	FALSE	canonical	3	24	junction_19	23.4606557210984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	129440126	False	NA	18	True	AATAAA	-18	NA	129440223	129520351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00062977	chr3	+	4046	30	FSM	ENSG00000163913.14	ENST00000348417.7	4075	30	0	29	0	6	multi-exon	FALSE	canonical	1	3	junction_7	28.817355056243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTAAGGAAAAAAATCTG	129440126	False	NA	NA	False	NA	NA	NA	129440223	129520478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00062978	chr3	+	3600	27	NIC	ENSG00000163913.14	novel	4007	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.9654201096787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	129440157	False	NA	16	True	AATAAA	-16	NA	129440230	129520349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_129440372_129449870_129449938_129451913_129451999_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00062981	chr3	+	4531	27	FSM	ENSG00000163913.14	ENST00000506507.5	4532	27	1	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	19.9806489224186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGCCCAGATGAAGTT	129449860	False	NA	22	True	AATAAA	-22	NA	129449870	129520355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00062986	chr3	+	4983	28	FSM	ENSG00000017260.20	ENST00000508532.5	4969	28	-14	0	-14	0	multi-exon	FALSE	canonical	3	91	junction_1	100.670032374989	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130893840	True	NA	17	True	AATAAA	-19	NA	130893976	131003150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894707_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
WTC11_00062988	chr3	+	3690	28	FSM	ENSG00000017260.20	ENST00000533801.6	3690	28	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_27	123.734826424225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCCAAGCTGTGGTGC	130892873	True	NA	34	True	ATTAAA	-31	NA	130894014	131016709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
WTC11_00062989	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	83.2847430355439	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130892942	False	NA	17	True	AATAAA	-19	NA	130894083	131003150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
WTC11_00062991	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	88.0419144397988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894093	True	NA	17	True	AATAAA	-19	NA	130894177	131003150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
WTC11_00062993	chr3	+	3669	28	FSM	ENSG00000017260.20	ENST00000513801.5	3439	28	-200	-30	-13	30	multi-exon	FALSE	canonical	3	52	junction_27	122.529960502934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACCTGTGTGTTCAAA	130893841	True	NA	67	True	NA	NA	NA	130893977	131016742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
WTC11_00062994	chr3	+	3484	27	FSM	ENSG00000017260.20	ENST00000328560.12	3484	27	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_26	113.641246210329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	130894229	False	NA	9	True	ATTAAA	-6	NA	130894447	131016684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
WTC11_00062995	chr3	+	4065	28	FSM	ENSG00000017260.20	ENST00000359644.7	3401	28	-664	0	-14	0	multi-exon	FALSE	canonical	3	71	junction_27	103.730538856009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATTAAATATTATTCTC	130893840	True	NA	-6	True	AATACA	-4	NA	130893976	131016669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
WTC11_00062999	chr3	+	3819	4	FSM	ENSG00000017260.20	ENST00000513636.1	590	4	0	-3229	0	3229	multi-exon	FALSE	canonical	3	485	junction_2	27.956315128349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGATAATACATATTT	130953812	True	NA	NA	False	NA	NA	NA	130953838	130962810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130953977_130955011_130955081_130956103_130956180_130959274
WTC11_00063007	chr3	+	1720	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	53	0	-32	0	multi-exon	FALSE	canonical	3	134	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	131360949	True	NA	31	True	AATAAA	-28	NA	131361897	131364531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131362442_131363355
WTC11_00063016	chr3	+	2997	12	FSM	ENSG00000081307.15	ENST00000494238.6	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.369983608845	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTACCAAATGTTT	132654343	True	NA	12	True	AATAAA	-24	NA	132660361	132677782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_132661049_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
WTC11_00063028	chr3	+	3622	5	FSM	ENSG00000091527.17	ENST00000420115.6	3621	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	27	junction_4	251.25584570314	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	133574369	True	NA	13	True	AATAAA	-15	NA	133574455	133590260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133574593_133575038_133575116_133584001_133584151_133586562_133586723_133587161
WTC11_00063030	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	16.4054530229704	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	133799205	True	NA	10	True	AATAAA	-32	NA	133805814	133821492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
WTC11_00063031	chr3	+	1095	4	FSM	ENSG00000144867.13	ENST00000481356.1	1487	4	392	0	392	0	multi-exon	FALSE	canonical	3	306	junction_1	11.7284080571728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGAATTTTTTTTTTT	133810632	False	NA	15	True	NA	NA	NA	133810653	133819909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133811200_133815589_133815727_133816877_133816933_133819552
WTC11_00063034	chr3	+	5287	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	6	0	6	0	multi-exon	FALSE	canonical	3	48	junction_1	52.1229849064264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485294	False	NA	NA	False	ATTAAA	-17	NA	134486062	134565031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00063035	chr3	+	7261	12	FSM	ENSG00000182923.20	ENST00000682042.1	7253	12	-8	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	39.7797656110002	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	134485268	True	NA	NA	False	AAAAAG	-31	NA	134486036	134567117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00063036	chr3	+	1830	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	-113	23	6	0	multi-exon	FALSE	canonical	3	35	junction_12	59.7285526360718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATTGTAAAGAAAAT	134485294	False	NA	-18	True	NA	NA	NA	134486062	134574990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
WTC11_00063037	chr3	+	5522	13	FSM	ENSG00000182923.20	ENST00000684677.1	5506	13	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	56.4556733690739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485404	False	NA	NA	False	ATTAAA	-8	NA	134486172	134565022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00063038	chr3	+	5361	12	FSM	ENSG00000182923.20	ENST00000683861.1	5361	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	46.4845126612657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134486113	False	NA	NA	False	ATTAAA	-17	NA	134486204	134565031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00063043	chr3	+	650	4	FSM	ENSG00000073711.11	ENST00000469270.1	747	4	0	97	0	-97	multi-exon	FALSE	canonical	1	1	junction_3	31.6684210040363	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGGAGAATCGGCTT	NA	False	NA	NA	False	NA	NA	NA	136102102	136106823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136102183_136103257_136103377_136106215_136106323_136106479
WTC11_00063045	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	214.675217221012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
WTC11_00063048	chr3	+	6093	16	FSM	ENSG00000114054.14	ENST00000471595.5	6090	16	-3	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	163.983657722347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATGTTGAGTTTTCAT	136247673	True	NA	NA	False	AATAAA	-22	NA	136250354	136337895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904_136329985_136333401
WTC11_00063050	chr3	+	1973	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	-24	0	18	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818791	True	NA	11	True	ATTAAA	-17	NA	136819101	136855888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136819629_136854442
WTC11_00063052	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	54.0637483799347	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	136859839	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
WTC11_00063055	chr3	+	1677	11	ISM	ENSG00000114098.18	ENST00000461822.5	2221	21	-208	50573	4	0	5prime_fragment	FALSE	canonical	3	17	junction_10	121.181846825339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	138186300	True	NA	7	True	AATAAA	-17	NA	138187308	138245681	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138245087
WTC11_00063056	chr3	+	3524	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	-33	-310	4	310	multi-exon	FALSE	canonical	3	64	junction_1	105.208523102139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTACTTTCTCCATGAA	138186300	True	NA	NA	False	NA	NA	NA	138187308	138247197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
WTC11_00063058	chr3	+	3042	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	1	0	1	0	multi-exon	FALSE	canonical	3	102	junction_1	94.3357376870435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	40	True	TATAAA	-6	NA	138187267	138296549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
WTC11_00063060	chr3	+	4702	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	20	6	1	5	multi-exon	FALSE	canonical	2	7	junction_5	95.0191954291342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAAAAAGGAGTCTGT	NA	False	NA	7	True	AATAAA	-21	NA	138187267	138298378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
WTC11_00063062	chr3	+	4172	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	-263	-2253	1	1047	multi-exon	FALSE	canonical	3	150	junction_1	71.5059958186482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGCAGAAATCGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	138187267	138247934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
WTC11_00063063	chr3	+	2922	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	-12	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	98.0228148046271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	138187493	False	NA	NA	False	NA	NA	NA	138187516	138246857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
WTC11_00063066	chr3	+	1696	12	NIC	ENSG00000114098.18	novel	3181	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	125.264084673505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	138183924	True	NA	7	True	AATAAA	-17	NA	138187543	138245681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_138187600_138188400_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
WTC11_00063078	chr3	+	1221	8	FSM	ENSG00000175110.14	ENST00000310776.9	1202	8	-19	0	-3	0	multi-exon	TRUE	canonical	3	93	junction_1	166.805887430968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	139338008	True	NA	24	True	ATTAAA	-26	NA	139344000	139357129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139344199_139346880_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
WTC11_00063080	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	18	junction_1	192.143441316159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	139344350	True	NA	-91	True	NA	NA	NA	139344564	139357014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
WTC11_00063087	chr3	+	5734	8	NIC	ENSG00000114120.14	novel	5809	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	94.8756436347182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAAATACAGAGGAATAT	140935222	True	NA	-20	True	NA	NA	NA	140941867	140980961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966933_140967037_140970926_140970994_140973715_140974006_140976259
WTC11_00063097	chr3	+	2982	3	FSM	ENSG00000175093.5	ENST00000310546.3	2963	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	126	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	141050247	True	NA	21	True	AATAAA	-21	NA	141051327	141148611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141051993_141065951_141066799_141147141
WTC11_00063098	chr3	+	2088	2	NIC	ENSG00000175093.5	novel	2963	3	NA	NA	23	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCTGCGTATTAAATG	141050289	True	NA	16	True	AATAAA	-16	NA	141051369	141148606	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_141051993_141147141
WTC11_00063108	chr3	+	5643	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	-5	0	-5	0	multi-exon	FALSE	canonical	3	61	junction_19	22.2259406676821	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	141484605	True	NA	8	True	AATAAA	-17	NA	141487021	141615344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
WTC11_00063109	chr3	+	5689	24	NIC	ENSG00000155903.14	novel	5638	24	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_19	27.1420682973051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	141484562	True	NA	8	True	AATAAA	-17	NA	141486978	141615344	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586756_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
WTC11_00063111	chr3	+	652	2	FSM	ENSG00000114125.14	ENST00000498828.1	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTCTCCTTCCCATTC	141725437	True	NA	NA	False	NA	NA	NA	141738248	141743027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738517_141742643
WTC11_00063112	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	141725465	True	NA	21	True	AATAAA	-17	NA	141738276	141745700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738517_141745158
WTC11_00063113	chr3	+	2687	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	-21	3	0	-3	multi-exon	FALSE	canonical	3	1651	junction_1	216	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAAATGTATGTAATT	141725465	True	NA	4	True	CATAAA	-18	NA	141738276	141747557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738517_141743508_141743557_141745158
WTC11_00063127	chr3	+	4217	27	Fusion	ENSG00000241570.8_ENSG00000163714.18	novel	3491	28	NA	NA	7	3	multi-exon	FALSE	canonical	3	120	junction_26	148.774043355457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTGAATCTTGATTT	142993419	True	NA	19	True	AATAAA	-28	NA	143001530	143057656	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
WTC11_00063129	chr3	+	7797	28	FSM	ENSG00000241570.8_ENSG00000163714.18	ENST00000493598.6	3491	28	-602	-3704	-149	-175	multi-exon	FALSE	canonical	3	393	junction_9	89.8067884920692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCCATGTAATTTTCT	NA	False	NA	14	True	AATAAA	-27	NA	143001018	143060550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
WTC11_00063130	chr3	+	7292	28	Fusion	ENSG00000241570.8_ENSG00000163714.18	novel	3491	28	NA	NA	0	-178	multi-exon	FALSE	canonical	3	358	junction_9	94.5349167245084	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGTCCATGTAATTT	142993412	True	NA	11	True	AATAAA	-24	NA	143001523	143060547	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
WTC11_00063131	chr3	+	7002	27	NIC	ENSG00000163714.18	novel	3491	28	NA	NA	4	-181	combination_of_known_junctions	FALSE	canonical	3	120	junction_26	145.905745899161	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAGACTGTCCATGTAA	142993519	True	NA	8	True	AATAAA	-21	NA	143001630	143060544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
WTC11_00063134	chr3	+	1267	8	FSM	ENSG00000163714.18	ENST00000467348.1	1267	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	228.806843054511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	143036047	True	NA	24	True	AATAAA	-21	NA	143036082	143056846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
WTC11_00063139	chr3	+	4330	3	FSM	ENSG00000181744.9	ENST00000315691.8	4330	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	3.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCAGACTATTTCTTAA	143970377	True	NA	20	True	AATAAA	-20	NA	143971822	143992368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143972990_143985542_143985847_143989509
WTC11_00063144	chr3	+	5380	2	Antisense	novelGene_ENSG00000205412.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTTTGGTGGTCTCT	148151931	False	NA	NA	False	AATAAA	-20	NA	148151941	148420058	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_148152058_148414794
WTC11_00063155	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	42.2794933218878	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	149121013	True	NA	-18	True	NA	NA	NA	149129690	149154109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
WTC11_00063157	chr3	+	2764	10	FSM	ENSG00000082996.20	ENST00000392894.8	2336	10	-445	17	0	0	multi-exon	TRUE	canonical	3	271	junction_3	23.7538820738895	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	149812753	False	NA	-1	True	AATAAA	-12	NA	149812769	149962122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
WTC11_00063165	chr3	+	1512	2	FSM	ENSG00000082996.20	ENST00000493238.1	815	2	64	-761	64	-4	multi-exon	FALSE	canonical	3	301	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCTGTTCTACTGTA	NA	False	NA	12	True	AATAAA	-25	NA	149960020	149962135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149960137_149960739
WTC11_00063170	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	58.5778114988944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	150537574	True	NA	-36	True	TTTAAA	-14	NA	150546785	150564899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
WTC11_00063174	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	32.873089298087	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	150591295	True	NA	4	True	AATAAA	-16	NA	150603320	150630436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
WTC11_00063179	chr3	+	10744	43	FSM	ENSG00000144893.13	ENST00000474524.5	10744	43	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	4.11188477123108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTTAATGACTAAGG	151086878	False	NA	NA	False	NA	NA	NA	151086888	151437072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_151087026_151116337_151116443_151122782_151122975_151127824_151127985_151156160_151156331_151158688_151158800_151159831_151160102_151163892_151164043_151165419_151165520_151165845_151165983_151185329_151185462_151188353_151188481_151190716_151190932_151193489_151193667_151350058_151350207_151355120_151355240_151355895_151356040_151357212_151357377_151360473_151360606_151364978_151365207_151365849_151365992_151367645_151367767_151368149_151368252_151369435_151369550_151372566_151372767_151376025_151376215_151376799_151376875_151376990_151377179_151378011_151378174_151380112_151380225_151382655_151382746_151383778_151383889_151384082_151384219_151385029_151385192_151387809_151388173_151389978_151390136_151394655_151394868_151409242_151409333_151411277_151411508_151413138_151413296_151416311_151416423_151430298_151430381_151432751
WTC11_00063182	chr3	+	1681	3	FSM	ENSG00000152601.18	ENST00000461436.1	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAATATGTAATTAAGCA	152267297	True	NA	NA	False	ATTAAA	-6	NA	152268905	152302449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_152269093_152299404_152300368_152301918
WTC11_00063183	chr3	+	5092	9	FSM	ENSG00000152601.18	ENST00000463374.5	5092	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.7391201416245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGTGTATCTGAGATTG	152299634	False	NA	26	True	AATAAA	-38	NA	152299682	152465780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_152300368_152414940_152415112_152432716_152432921_152445281_152445540_152446703_152446758_152447619_152447774_152456266_152456362_152459270_152459346_152462384
WTC11_00063191	chr3	+	6072	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	-442	26	21	0	multi-exon	TRUE	canonical	3	35	junction_1	11.1244834590827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	155079773	False	NA	-18	True	AATACA	-2	NA	155079876	155183678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
WTC11_00063200	chr3	+	2613	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	-16	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	11.842588972866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	158107218	True	NA	NA	False	AATAAA	-16	NA	158110072	158545730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
WTC11_00063203	chr3	+	1616	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.6032012894673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	158107213	True	NA	-89	True	AATAAA	-3	NA	158110067	158544734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
WTC11_00063204	chr3	+	1203	8	NIC	ENSG00000178053.20	novel	1247	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	231.221247523065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566951	True	NA	15	True	AATAAA	-18	NA	158571172	158605397	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_158571348_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
WTC11_00063206	chr3	+	2189	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	-21	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	41.6949903732118	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566951	True	NA	4	True	AATAAA	-16	NA	158571172	158606456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
WTC11_00063211	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.371725749085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	158637361	True	NA	12	True	AATAAA	-13	NA	158644596	158692569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
WTC11_00063219	chr3	+	1827	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	-182	0	-182	0	multi-exon	FALSE	canonical	3	84	junction_1	25.9293913027925	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	NA	False	NA	12	True	AATAAA	-20	NA	159839678	159897360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
WTC11_00063221	chr3	+	849	4	FSM	ENSG00000113810.16	ENST00000465903.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	137.805015228845	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGATTTTTACTGTTA	160394134	True	NA	NA	False	NA	NA	NA	160399637	160402867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160399750_160400599_160400966_160401914_160402094_160402675
WTC11_00063222	chr3	+	584	5	FSM	ENSG00000113810.16	ENST00000485645.5	583	5	-1	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	133.392278637109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAAGTCATTCCTAA	160394134	True	NA	NA	False	AAAACA	-11	NA	160399637	160404336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160399698_160400821_160400966_160401914_160402094_160402675_160402868_160404327
WTC11_00063225	chr3	+	5128	24	FSM	ENSG00000113810.16	ENST00000357388.8	5116	24	-12	0	0	0	multi-exon	TRUE	canonical	3	283	junction_1	98.9819635667589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	160394134	True	NA	14	True	AATAAA	-17	NA	160399637	160434953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
WTC11_00063226	chr3	+	5356	23	FSM	ENSG00000113810.16	ENST00000344722.5	5356	23	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	94.2889878148053	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	160394978	False	NA	14	True	AATAAA	-17	NA	160400481	160434953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
WTC11_00063233	chr3	+	4235	16	FSM	ENSG00000113810.16	ENST00000462668.5	4235	16	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	77.7409944766738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGAAATTCAAGTACGGT	160413996	False	NA	15	True	AATAAA	-18	NA	160414022	160434954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
WTC11_00063238	chr3	+	739	8	FSM	ENSG00000169251.13	ENST00000493066.5	746	8	7	0	7	0	multi-exon	FALSE	canonical	3	22	junction_1	133.836635111464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTCTGAACCTTGAAT	NA	False	NA	NA	False	NA	NA	NA	161221268	161238191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112
WTC11_00063240	chr3	+	3040	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	95.4571224279374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTGTGTGGAACATTT	161216001	True	NA	8	True	AATAAA	-14	NA	161221310	161252004	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_161221725_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
WTC11_00063243	chr3	+	487	5	FSM	ENSG00000169251.13	ENST00000478160.1	606	5	0	119	0	-119	multi-exon	FALSE	canonical	2	41	junction_1	162.062487948322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTTAAAACTCAAAAGC	161224915	False	NA	NA	False	AATACA	-23	NA	161224929	161235212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161225019_161227246_161227344_161233398_161233480_161234726_161234856_161235121
WTC11_00063244	chr3	+	2602	3	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	5.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGTCTGATTTCTT	163907620	True	NA	NA	False	ATTAAA	-17	NA	163907844	163920144	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_163908084_163917106_163917430_163918104
WTC11_00063251	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	75.7585597473975	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	169771450	True	NA	0	True	AATAAA	-11	NA	169773426	169787544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
WTC11_00063258	chr3	+	2013	4	NIC	ENSG00000173890.17	novel	1962	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	204.721491028394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	170033787	True	NA	5	True	ATTAAA	-18	NA	170038198	170085392	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_170038471_170038914_170039044_170079773_170079898_170083904
WTC11_00063262	chr3	+	554	2	FSM	ENSG00000136603.14	ENST00000477216.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGAGGTGTGCCTCTTT	170346483	True	NA	NA	False	AAGAAA	-11	NA	170357677	170360073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357857_170359698
WTC11_00063263	chr3	+	1460	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	-379	-487	-372	0	multi-exon	FALSE	canonical	3	216	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATCACCTCAGGTTCT	170356861	True	NA	NA	False	AAGAAA	-27	NA	170357305	170360700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357764_170359698
WTC11_00063264	chr3	+	607	3	FSM	ENSG00000136603.14	ENST00000476188.5	607	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATCACCTCAGGTTCT	170346520	True	NA	NA	False	AAGAAA	-27	NA	170357714	170360700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357764_170359698_170359877_170360320
WTC11_00063265	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.2987477417232	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	170346520	True	NA	19	True	AATAAA	-21	NA	170357714	170396835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
WTC11_00063274	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.6483838619908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	172034793	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
WTC11_00063279	chr3	+	4394	25	FSM	ENSG00000114346.14	ENST00000540509.5	4406	25	12	0	12	0	multi-exon	TRUE	canonical	3	26	junction_2	134.32020200501	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	172736375	True	NA	17	True	AATAAA	-19	NA	172750696	172821473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
WTC11_00063281	chr3	+	4159	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	-23	0	18	0	multi-exon	FALSE	canonical	3	327	junction_4	49.0439145619062	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736381	True	NA	18	True	AATAAA	-20	NA	172750702	172821474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
WTC11_00063292	chr3	+	8750	6	FSM	ENSG00000169760.17	ENST00000361589.8	5092	6	-137	-3521	-137	0	multi-exon	FALSE	canonical	3	23	junction_1	11.3736537664903	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTTGACTATTTTTAA	NA	False	NA	25	True	AATAAA	-19	NA	173584417	174286644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_173585035_173604278_173605092_173807679_173807833_174275314_174275528_174278860_174279651_174280480
WTC11_00063293	chr3	+	479	3	FSM	ENSG00000177694.16	ENST00000478624.1	675	3	9	187	0	-187	multi-exon	FALSE	canonical	1	1	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGAGTTCTTCACCCTC	174440824	True	NA	NA	False	NA	NA	NA	174440986	174459590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_174441033_174458513_174458597_174459240
WTC11_00063303	chr3	+	543	5	FSM	ENSG00000171109.19	ENST00000489329.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	43.4820365208439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTTAGAAGCACAGAA	179359707	False	NA	NA	False	NA	NA	NA	179359719	179367498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179359861_179362357_179362483_179364296_179364406_179365117_179365226_179367438
WTC11_00063309	chr3	+	1730	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	20	0	-14	0	multi-exon	FALSE	canonical	3	96	junction_1	241.709248781973	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	179562883	False	NA	126	True	AATAAA	-23	NA	179562905	179588407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
WTC11_00063315	chr3	+	4043	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	3	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	437.177563722365	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	179590197	True	NA	10	True	AATAAA	-18	NA	179604793	179627647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
WTC11_00063317	chr3	+	804	4	FSM	ENSG00000058056.10	ENST00000679350.1	804	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	25.7725090401036	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGCCTTTACCGAC	179650237	True	NA	NA	False	NA	NA	NA	179653039	179708957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179653394_179701007_179701130_179706933_179707077_179708772
WTC11_00063318	chr3	+	8160	21	FSM	ENSG00000058056.10	ENST00000263966.8	8038	21	-122	0	-114	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1508250600421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGCCCTTTATGGCTC	179652673	False	NA	11	True	ATTAAA	-15	NA	179652917	179789401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
WTC11_00063319	chr3	+	781	5	FSM	ENSG00000058056.10	ENST00000679749.1	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	21.8674987138447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGCCTTTACCGAC	179650321	True	NA	NA	False	NA	NA	NA	179653123	179708957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179653394_179690240_179690302_179701007_179701130_179706933_179707077_179708772
WTC11_00063320	chr3	+	500	3	FSM	ENSG00000058056.10	ENST00000681128.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGCCTTTACCGAC	NA	False	NA	NA	False	NA	NA	NA	179701007	179708957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179701180_179706933_179707077_179708772
WTC11_00063323	chr3	+	471	1	FSM	ENSG00000239880.1	ENST00000493579.1	1953	1	513	969	513	-969	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATGAACTGGAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	180323619	180324090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180323600_180324100
WTC11_00063326	chr3	+	2292	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	-18	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	18	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	180601030	True	NA	14	True	AATAAA	-23	NA	180602192	180617828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
WTC11_00063327	chr3	+	8772	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	-328	-6314	-132	114	multi-exon	TRUE	canonical	3	314	junction_14	78.7714661381329	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACAAAAAATTTAAACCAC	NA	False	NA	NA	False	NA	NA	NA	180912349	180982867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
WTC11_00063330	chr3	+	2653	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	-2	0	0	0	multi-exon	FALSE	canonical	3	314	junction_15	76.3426195224892	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180885710	True	NA	11	True	AATAAA	-16	NA	180912669	180977155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
WTC11_00063333	chr3	+	2533	6	FSM	ENSG00000114416.18	ENST00000476672.1	976	6	0	-1557	0	402	multi-exon	FALSE	canonical	3	531	junction_3	57.1118201425939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAGGCCAGGTAGCAG	180957792	True	NA	NA	False	AATATA	-44	NA	180957868	180972218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157
WTC11_00063344	chr3	+	1491	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	-1	1	-1	0	multi-exon	FALSE	canonical	3	20	junction_1	30.3461511379761	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446527	True	NA	23	True	AATAAA	-27	NA	183447606	183456013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
WTC11_00063347	chr3	+	1386	2	FSM	ENSG00000240024.6	ENST00000482098.1	794	2	-119	-473	-119	0	multi-exon	FALSE	canonical	3	92	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGGTCCTTATTCCTT	183452444	False	NA	24	True	AATAAA	-28	NA	183453523	183456014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183454094_183455198
WTC11_00063350	chr3	+	7397	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	-17	0	-4	0	multi-exon	FALSE	canonical	3	16	junction_1	31.8423852749759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	183632133	True	NA	17	True	AATAAA	-18	NA	183635605	183684477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
WTC11_00063361	chr3	+	587	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	-2	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	184131115	True	NA	16	True	AATAAA	-30	NA	184135362	184136980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611
WTC11_00063367	chr3	+	3482	15	FSM	ENSG00000145191.15	ENST00000481054.5	3460	15	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.680466181614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	184131115	True	NA	15	True	ATTAAA	-16	NA	184135362	184145311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184144225_184144596_184144708_184144883
WTC11_00063370	chr3	+	3300	15	FSM	ENSG00000145191.15	ENST00000491008.6	3298	15	-2	0	0	0	multi-exon	TRUE	canonical	2	12	junction_8	77.9933278150988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	184135503	False	NA	15	True	ATTAAA	-16	NA	184135518	184145311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
WTC11_00063372	chr3	+	839	1	FSM	ENSG00000228205.1	ENST00000433853.1	732	1	-21	-86	-21	86	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACAAAATTAGGGCTGG	184149671	False	NA	NA	False	AATAAA	-24	NA	184149682	184150521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184149700_184150500
WTC11_00063374	chr3	+	668	5	FSM	ENSG00000161202.20	ENST00000462665.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	231.415616370201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGACTCCACCAGCAGG	184155351	False	NA	NA	False	NA	NA	NA	184155561	184164912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184155797_184163656_184163727_184164266_184164389_184164477_184164602_184164795
WTC11_00063402	chr3	+	2330	6	FSM	ENSG00000161204.12	ENST00000466742.5	2331	6	1	0	1	0	multi-exon	FALSE	canonical	3	411	junction_3	24.429490375364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCATGTCTGCTG	184183366	False	NA	19	True	ATTAAA	-16	NA	184189830	184194006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184191044_184191122_184191256_184192600_184192897_184193101_184193235_184193364_184193453_184193539
WTC11_00063403	chr3	+	1182	7	FSM	ENSG00000161204.12	ENST00000480562.3	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	23.1834471600369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCATGTCTGCTG	184184399	False	NA	19	True	ATTAAA	-16	NA	184190863	184194006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
WTC11_00063405	chr3	+	999	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	280	junction_2	4	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	184248331	True	NA	18	True	AATACA	-24	NA	184249647	184258759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184249891_184257472_184257757_184258287
WTC11_00063411	chr3	+	2919	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	-6	0	0	0	multi-exon	FALSE	canonical	3	2582	junction_8	233.22787140477	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	184275495	True	NA	24	True	AATAAA	-16	NA	184299234	184309050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
WTC11_00063419	chr3	+	5589	33	FSM	ENSG00000114867.22	ENST00000414031.5	5569	33	-20	0	-13	0	multi-exon	FALSE	canonical	3	62	junction_3	455.895577236444	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184314468	False	NA	19	True	ATTAAA	-16	NA	184314481	184335353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316071_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063420	chr3	+	566	4	FSM	ENSG00000114867.22	ENST00000444134.5	558	4	-8	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	764.99542482292	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGGAAGTAGAAGTGACA	184279504	True	NA	NA	False	NA	NA	NA	184314541	184321554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184320629_184320723_184320926_184320994_184321281
WTC11_00063422	chr3	+	5250	30	FSM	ENSG00000114867.22	ENST00000392537.6	5229	30	-21	0	19	0	multi-exon	FALSE	canonical	3	108	junction_1	454.173936205261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCACTGCCTTTCTGCT	184279483	True	NA	17	True	ATTAAA	-14	NA	184314520	184335351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063423	chr3	+	5138	29	FSM	ENSG00000114867.22	ENST00000442406.5	5129	29	-9	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	582.431666965038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279504	True	NA	19	True	ATTAAA	-16	NA	184314541	184335353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320842_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063430	chr3	+	4990	29	FSM	ENSG00000114867.22	ENST00000350481.9	4990	29	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	466.996777072303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279568	True	NA	19	True	ATTAAA	-16	NA	184314605	184335353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063431	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_14	343.108714322079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279568	True	NA	19	True	ATTAAA	-16	NA	184314605	184335353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063432	chr3	+	6487	35	Fusion	ENSG00000114867.22_ENSG00000163882.10	novel	5405	33	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_33	517.466777597321	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGGGAAACTGACTCG	184279568	True	NA	-60	True	NA	NA	NA	184314605	184368434	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726_184335352_184365977_184366801_184368176
WTC11_00063434	chr3	+	5669	32	FSM	ENSG00000114867.22	ENST00000342981.8	5667	32	-2	0	0	0	multi-exon	FALSE	canonical	3	633	junction_13	388.144681071799	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCTGCTTTATGCC	184314940	True	NA	24	True	ATTAAA	-21	NA	184315163	184335358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00063448	chr3	+	3677	3	FSM	ENSG00000175182.15	ENST00000310585.4	3677	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATCTGGTCATTGGAG	184340459	False	NA	24	True	ATTAAA	-29	NA	184340469	184346275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184342249_184342743_184342861_184344494
WTC11_00063449	chr3	+	1756	6	NIC	ENSG00000163882.10	novel	1807	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	441.014104082851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGGGAAACTGACTCG	NA	False	NA	-60	True	NA	NA	NA	184361667	184368434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184362147_184362872_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
WTC11_00063451	chr3	+	1802	6	FSM	ENSG00000163882.10	ENST00000456318.6	1807	6	8	-3	-5	1	multi-exon	FALSE	canonical	3	49	junction_1	361.909159873027	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTGTATTGTTTC	184361109	True	NA	16	True	AAAAAG	-32	NA	184361717	184368594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184362147_184362872_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
WTC11_00063454	chr3	+	1159	4	FSM	ENSG00000163882.10	ENST00000430783.5	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	425.493439040682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGGTGTATTGTTT	184362989	False	NA	15	True	AAAAAG	-31	NA	184363001	184368593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184368176
WTC11_00063455	chr3	+	850	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	-42	-17	0	0	multi-exon	FALSE	canonical	3	45	junction_1	402.926792358116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	184354169	True	NA	-28	True	ATTAAA	-28	NA	184363360	184368550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
WTC11_00063457	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	383.402774507436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	184354242	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
WTC11_00063474	chr3	+	3013	24	NNC	ENSG00000156931.16	novel	564	4	NA	NA	-6932	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	48.9193232683764	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCAGGTCTCCTGGCTG	184908310	False	NA	5	True	AATAAA	-16	NA	184908450	185052601	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_184908747_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
WTC11_00063477	chr3	+	942	7	FSM	ENSG00000163904.13	ENST00000430355.5	878	7	-31	-33	-31	0	multi-exon	FALSE	canonical	3	129	junction_1	21.1640418320005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGTCCTGTAACTTC	185579817	True	NA	NA	False	AAGAAA	-15	NA	185582464	185609318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246
WTC11_00063478	chr3	+	3244	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	2	694	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	29.3954051468933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATGCTGAAATGATT	185579850	True	NA	23	True	AATAAA	-24	NA	185582497	185631099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
WTC11_00063479	chr3	+	3113	17	NIC	ENSG00000163904.13	novel	738	7	NA	NA	97	692	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	51.898789725773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATATGCTGAAATGA	185579945	True	NA	21	True	AATAAA	-22	NA	185582592	185631097	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598991_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
WTC11_00063481	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	39.9194501465138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	185585418	True	NA	18	True	AATAAA	-18	NA	185586294	185633551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
WTC11_00063486	chr3	+	1660	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	-20	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	67.5548245574486	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	186560469	True	NA	31	True	AATACA	-17	NA	186570699	186585793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
WTC11_00063488	chr3	+	738	3	FSM	ENSG00000156976.17	ENST00000486805.5	590	3	-148	0	124	0	multi-exon	FALSE	canonical	3	552	junction_1	999.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTTCAAGGAGACCCA	186783418	False	NA	NA	False	NA	NA	NA	186783428	186785041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784428_186784478_186784563
WTC11_00063491	chr3	+	5333	4	FSM	ENSG00000156976.17	ENST00000485101.5	5327	4	-6	0	0	0	multi-exon	FALSE	canonical	3	1862	junction_1	284.223308137965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	186693049	True	NA	20	True	AATAAA	-16	NA	186783571	186789894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186786052_186786163
WTC11_00063492	chr3	+	1891	11	FSM	ENSG00000156976.17	ENST00000323963.10	1886	11	-5	0	0	0	multi-exon	FALSE	canonical	3	1824	junction_4	279.574963113652	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693049	True	NA	23	True	AATAAA	-19	NA	186783571	186789897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
WTC11_00063493	chr3	+	1894	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	-5	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	570.907663287155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693049	True	NA	23	True	AATAAA	-19	NA	186783571	186789897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
WTC11_00063494	chr3	+	1751	10	FSM	ENSG00000156976.17	ENST00000426808.5	1751	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	641.235574284829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693049	True	NA	23	True	AATAAA	-19	NA	186783571	186789897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
WTC11_00063495	chr3	+	1961	12	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	336	junction_11	742.094946142951	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	186693074	True	NA	7	True	AATAAA	-3	NA	186783596	186789881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788421_186789124
WTC11_00063496	chr3	+	2668	11	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	544	junction_10	735.838739126991	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	186693074	True	NA	7	True	AATAAA	-3	NA	186783596	186789881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309
WTC11_00063497	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	804.252033465464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693074	True	NA	23	True	AATAAA	-19	NA	186783596	186789897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
WTC11_00063501	chr3	+	437	2	FSM	ENSG00000073849.16	ENST00000468614.1	642	2	-272	477	-1	0	multi-exon	FALSE	canonical	3	165	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGCCCTGGTGCCAGG	186921179	True	NA	NA	False	NA	NA	NA	186930500	186963887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186930835_186963784
WTC11_00063505	chr3	+	4628	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	-24	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	47.9723559852496	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921180	True	NA	20	True	AATAAA	-20	NA	186930501	187078553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
WTC11_00063510	chr3	+	863	3	NNC	ENSG00000228952.1	novel	246	2	NA	NA	-1214	495	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCTATAGGAGAGTCAT	NA	False	NA	-2	True	AATAAA	-22	NA	187447630	187449945	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_187447758_187448849_187448891_187449250
WTC11_00063512	chr3	+	6487	12	NNC	ENSG00000145012.14	novel	612	5	NA	NA	-6	-11896	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_2	13.1965434993629	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAGAG	188152987	True	NA	NA	False	AGTAAA	-22	NA	188153865	188878775	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_188154022_188225404_188225528_188341655_188341720_188406111_188406314_188484591_188484705_188524664_188524788_188609160_188609845_188708266_188708394_188760112_188760283_188866199_188866379_188872642_188872764_188874350
WTC11_00063513	chr3	+	6300	10	NIC	ENSG00000145012.14	novel	612	5	NA	NA	-6	-11896	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	13.1186419050182	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAGAG	188152987	True	NA	NA	False	AGTAAA	-22	NA	188153865	188878775	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_188154022_188406111_188406314_188484591_188484705_188524664_188524788_188609160_188609845_188708266_188708394_188760112_188760283_188866199_188866379_188872642_188872764_188874350
WTC11_00063518	chr3	+	1773	11	FSM	ENSG00000152492.15	ENST00000392456.4	1926	11	153	0	153	0	multi-exon	FALSE	canonical	3	190	junction_5	31.8113187403478	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	NA	False	NA	20	True	AATAAA	-27	NA	191329237	191392175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
WTC11_00063519	chr3	+	8633	12	FSM	ENSG00000152492.15	ENST00000392455.9	8629	12	0	-4	0	4	multi-exon	FALSE	canonical	3	28	junction_5	93.3297716754506	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGAGAAGTAGCTTTGT	191326664	True	NA	5	True	AATAAA	-19	NA	191329393	191398663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191375061_191375590_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
WTC11_00063525	chr3	+	6451	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	-22	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	79.3953818976058	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583162	True	NA	10	True	TATAAA	-19	NA	193593185	193697811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
WTC11_00063527	chr3	+	6080	31	FSM	ENSG00000198836.11	ENST00000643329.1	6068	31	-12	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	113.032266779594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTATAATTCTATTATT	193583192	True	NA	5	True	ATTAAA	-13	NA	193593215	193697523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193603499_193603558_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
WTC11_00063553	chr3	+	898	3	FSM	ENSG00000242086.8	ENST00000625632.2	898	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTGGGGCTACAGGT	NA	False	NA	NA	False	NA	NA	NA	195681987	195686371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195682218_195683751_195683866_195685817
WTC11_00063555	chr3	+	1485	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	-59	4	-59	0	multi-exon	TRUE	canonical	3	15	junction_6	3.69966214673719	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAACTGGGCACCTTGC	196216298	True	NA	7	True	AATAAA	-19	NA	196216474	196233423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
WTC11_00063556	chr3	+	1066	5	FSM	ENSG00000163959.10	ENST00000484407.5	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3.49106001094224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCACCTTGCCTCTGTC	NA	False	NA	14	True	AATAAA	-26	NA	196227940	196233430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
WTC11_00063562	chr3	+	3038	6	FSM	ENSG00000163964.18	ENST00000392391.9	3038	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	20.6339526024463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATATAACTCTTCTTG	196710711	True	NA	9	True	AATAAA	-18	NA	196712376	196736007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922_196728137_196730991_196731093_196733758
WTC11_00063573	chr3	+	719	6	FSM	ENSG00000122068.13	ENST00000494309.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	131.054797699283	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTAAATCATCAGAA	197749403	False	NA	NA	False	NA	NA	NA	197749532	197773436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197749651_197756425_197756558_197763465_197763639_197768438_197768588_197770131_197770245_197773402
WTC11_00063575	chr3	+	6738	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	-5	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	24.4792641842029	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	197747069	True	NA	5	True	AATAAA	-17	NA	197749877	197787596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
WTC11_00063577	chr3	+	3344	9	NIC	ENSG00000122068.13	novel	6733	9	NA	NA	24	1910	combination_of_known_junctions	FALSE	canonical	2	15	junction_8	92.5148636706556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGATTTATTCTCAGC	197747153	True	NA	12	True	AATAAA	-13	NA	197749961	197784290	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781814
WTC11_00063578	chr3	+	474	4	FSM	ENSG00000122068.13	ENST00000426031.5	491	4	17	0	17	0	multi-exon	FALSE	canonical	2	4	junction_1	133.906269042524	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGCAAACCTTCTGAG	197747375	False	NA	NA	False	AATATA	-25	NA	197750183	197770161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197750347_197756425_197756558_197768438_197768588_197770131
WTC11_00063579	chr3	+	1758	9	FSM	ENSG00000122068.13	ENST00000424384.2	1758	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	93.2734554951193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACAATGTATTAGAATT	197750374	False	NA	NA	False	NA	NA	NA	197750389	197782380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197750823_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
WTC11_00063592	chr3	+	1234	5	FSM	ENSG00000182899.17	ENST00000647248.2	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	8323	junction_1	3384.83606508498	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGTATGGTTTTTT	197796428	True	NA	16	True	AATAAA	-16	NA	197950189	197956610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197950222_197950935_197950979_197951158_197951312_197954002_197954148_197955749
WTC11_00063593	chr3	+	1461	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	-226	-793	-210	0	multi-exon	FALSE	canonical	3	64	junction_3	5942.74433132539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGTATGGTTTTTT	197949900	True	NA	16	True	AATAAA	-16	NA	197949979	197956610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
WTC11_00063595	chr3	+	2086	2	FSM	ENSG00000182899.17	ENST00000474640.1	687	2	-1400	1	1209	-1	multi-exon	FALSE	canonical	3	12958	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTGCTACATGCTTA	197952149	False	NA	47	True	ATTAAA	-17	NA	197952162	197955850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197954148_197955749
WTC11_00063598	chr3	+	7018	16	FSM	ENSG00000185621.11	ENST00000330198.8	7043	16	18	7	1	-7	multi-exon	TRUE	canonical	3	8	junction_11	6.58078009560163	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAATTTGCATCCTGTC	197959624	True	NA	NA	False	AATAAA	-6	NA	197960217	198043713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197960441_197974376_197974475_197975041_197975073_197976028_197976112_197976597_197976716_197980325_197980505_197983942_197984049_197985795_197985891_197990558_197990677_197996174_197996283_197999265_197999343_198019252_198019386_198021445_198021606_198024657_198024789_198035832_198036044_198038566
WTC11_00063599	chr3	+	525	1	FSM	ENSG00000213113.3	ENST00000458717.1	1058	1	-73	606	-73	-606	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGCTGAATGCTGACC	NA	False	NA	NA	False	NA	NA	NA	198119647	198120172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_198119600_198120200
WTC11_00063605	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.576118216779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175635	True	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
WTC11_00063606	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	89.8047326147125	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175671	True	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
WTC11_00063607	chr3	-	723	5	FSM	ENSG00000113851.16	ENST00000459840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	12.8646803302686	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATAGAGATAAAGTTAT	NA	False	NA	-44	True	NA	NA	NA	3154970	3150859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746
WTC11_00063609	chr3	-	2187	11	FSM	ENSG00000113851.16	ENST00000231948.9	2187	11	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_5	49.900801596768	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175652	True	NA	NA	False	AGTAAA	-20	NA	3179691	3150010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
WTC11_00063610	chr3	-	488	4	FSM	ENSG00000113851.16	ENST00000498442.1	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	4.96655480858378	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGCCACCAAAAAAGACAT	NA	False	NA	NA	False	NA	NA	NA	3154192	3150987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959
WTC11_00063611	chr3	-	653	4	FSM	ENSG00000113851.16	ENST00000482844.5	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	16.8193010820572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCACTCCAATTTTAG	-3168884	False	NA	NA	False	AATAAA	-13	NA	3172923	3154549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3154832_3156218_3156282_3167633_3167794_3172775
WTC11_00063613	chr3	-	1018	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	-6	0	6	multi-exon	FALSE	canonical	3	46	junction_1	131.763756397577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGACATTTAGAAATTCC	-3175662	True	NA	8	True	AATAAA	-31	NA	3179701	3172169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
WTC11_00063614	chr3	-	1313	3	Antisense	novelGene_ENSG00000287720.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCCAAACTGCAATTCC	-3962957	False	NA	NA	False	NA	NA	NA	3963088	3857998	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_3859206_3961624_3961700_3963057
WTC11_00063615	chr3	-	2148	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	-1	0	1	multi-exon	FALSE	canonical	3	102	junction_4	12.8251461979971	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCGTCATCAGCTTCTT	-4464923	True	NA	-9	True	AATAAA	-20	NA	4467269	4361144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
WTC11_00063618	chr3	-	1336	1	FSM	ENSG00000268509.2	ENST00000600805.2	1127	1	8	-217	8	217	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACTCTTGGACAGTT	NA	False	NA	NA	False	NA	NA	NA	5188290	5186954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_5187000_5188300
WTC11_00063619	chr3	-	4073	4	NNC	ENSG00000180914.11	novel	4387	4	NA	NA	-83320	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.63299316185545	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCTTGATGGATGAA	NA	False	NA	-28	True	AATAAA	-37	NA	8852948	8750381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_8753225_8767265_8768330_8768495_8768592_8852878
WTC11_00063621	chr3	-	5844	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	13	0	-13	multi-exon	FALSE	canonical	3	99	junction_4	22.2015702647858	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGGAAGTCAGCTTATG	-8959925	True	NA	-17	True	AATAAA	-1	NA	8963472	8877087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
WTC11_00063622	chr3	-	478	3	FSM	ENSG00000070950.10	ENST00000429790.1	516	3	0	38	0	-38	multi-exon	FALSE	canonical	3	135	junction_2	7	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAATTAATACAGTCAT	NA	False	NA	NA	False	GATAAA	-10	NA	8902398	8890146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8890452_8898893_8899048_8902379
WTC11_00063623	chr3	-	8923	22	FSM	ENSG00000196220.17	ENST00000383836.8	8923	22	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	5.1578265386861	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCAGTGGTTTTTGA	-9248795	True	NA	-1	True	AATAAA	-21	NA	9249646	8980590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8985933_8990511_8990840_8992905_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
WTC11_00063624	chr3	-	677	5	NNC	ENSG00000206573.10	novel	621	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	18.6865593408739	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395519	False	NA	-4	True	ATTAAA	-16	NA	9395575	9385794	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9385924_9388086_9388128_9390289_9390498_9391597_9391827_9395505
WTC11_00063625	chr3	-	558	4	NIC	ENSG00000206573.10	novel	501	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	31.1804782231162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395522	False	NA	-4	True	ATTAAA	-16	NA	9395578	9385794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9385924_9390289_9390498_9391678_9391827_9395505
WTC11_00063626	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.3618495915476	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397372	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
WTC11_00063627	chr3	-	577	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-32	5	0	0	multi-exon	FALSE	canonical	3	50	junction_2	23.466731770743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395071	True	NA	-4	True	ATTAAA	-16	NA	9397474	9385794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
WTC11_00063629	chr3	-	3095	4	FSM	ENSG00000206573.10	ENST00000654392.1	3095	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTAACTCATTAACAAAC	-9396627	False	2403	NA	False	NA	NA	NA	9396683	9387433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9389797_9390289_9390498_9391426_9391827_9396559
WTC11_00063630	chr3	-	1651	2	FSM	ENSG00000206573.10	ENST00000665171.1	1651	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGGACTACAGGTGTG	-9391848	False	NA	NA	False	NA	NA	NA	9391904	9388101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9388128_9390279
WTC11_00063631	chr3	-	2439	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	63	-624	1	-123	multi-exon	FALSE	canonical	3	83	junction_1	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCCCAATACTTCATGA	-9395038	True	NA	NA	False	NA	NA	NA	9397441	9388224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391678_9391827_9397423
WTC11_00063632	chr3	-	2489	3	FSM	ENSG00000206573.10	ENST00000661714.1	2489	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	54	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395049	True	NA	-30	True	TATAAA	-37	NA	9397452	9388873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9389797_9390289_9391827_9397423
WTC11_00063633	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395091	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391426_9391827_9397423
WTC11_00063636	chr3	-	1837	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1155	1	0	multi-exon	FALSE	canonical	3	113	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTTCATTTAAGAATG	-9395038	True	NA	3	True	AATAAA	-21	NA	9397441	9390007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9391827_9397423
WTC11_00063641	chr3	-	4909	6	NNC	ENSG00000156959.9	novel	4900	4	NA	NA	0	4422	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.7765811584537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGGGTTTTGAGAAGG	-9552444	True	NA	NA	False	NA	NA	NA	9553795	9493938	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9493967_9498360_9502312_9503765_9503859_9505966_9506204_9552273_9552763_9553684
WTC11_00063642	chr3	-	4901	4	FSM	ENSG00000156959.9	ENST00000287585.8	4900	4	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	15.8954920234218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGCCACTTCTCTGA	-9552471	True	NA	0	True	AATAAA	-22	NA	9553822	9498359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9502312_9505966_9506204_9552273_9552848_9553684
WTC11_00063643	chr3	-	483	2	FSM	ENSG00000156959.9	ENST00000495730.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTGCTGACCTCTTG	-9550956	False	NA	NA	False	NA	NA	NA	9552307	9550611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9551061_9552273
WTC11_00063644	chr3	-	1453	12	FSM	ENSG00000134072.11	ENST00000256460.8	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	4.53999672333955	1782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTAGCGCTGTCTCCCTC	-9769569	True	NA	NA	False	AATAAA	-16	NA	9769947	9757346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9757622_9757728_9757847_9759487_9759576_9759671_9759751_9760655_9760769_9761460_9761537_9761630_9761758_9762913_9763053_9763138_9763214_9765758_9765891_9767666_9767782_9769831
WTC11_00063645	chr3	-	1850	5	FSM	ENSG00000171148.14	ENST00000492103.1	1868	5	21	-3	21	3	multi-exon	FALSE	canonical	3	336	junction_3	31.1478329904345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTTTGAATGTCTGT	-9788050	False	NA	0	True	AATAAA	-30	NA	9788062	9779963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198
WTC11_00063646	chr3	-	2621	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	-644	-3	-106	3	multi-exon	FALSE	canonical	3	336	junction_3	26.2270733212839	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTTTGAATGTCTGT	NA	False	NA	0	True	AATAAA	-30	NA	9793117	9779963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
WTC11_00063647	chr3	-	1599	8	NIC	ENSG00000171148.14	novel	1974	9	NA	NA	125	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.39893190477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGTCTTTGAATGTCT	-9792271	False	NA	-2	True	AATAAA	-28	NA	9792283	9779965	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9780550_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
WTC11_00063649	chr3	-	1272	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	-47	0	47	multi-exon	FALSE	canonical	3	612	junction_1	72.9373661095601	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	-9836636	True	NA	-6	True	AGTAAA	-14	NA	9844016	9837801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
WTC11_00063650	chr3	-	1118	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	0	47	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	246.775614843997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	-9836622	True	NA	-6	True	AGTAAA	-14	NA	9844002	9837801	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
WTC11_00063651	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	332.497659958008	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	-9836562	True	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
WTC11_00063655	chr3	-	2491	4	FSM	ENSG00000156990.14	ENST00000484134.5	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_3	48.4722142629729	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTGCAC	-9836636	True	NA	NA	False	NA	NA	NA	9844016	9839900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
WTC11_00063660	chr3	-	4066	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	-111	0	intron_retention	FALSE	canonical	3	20	junction_3	15.6418242755334	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	NA	False	NA	-7	True	AATAAA	-15	NA	9952519	9945541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
WTC11_00063661	chr3	-	3775	4	FSM	ENSG00000163704.12	ENST00000412055.6	3775	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.54606056566195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951123	True	NA	-7	True	AATAAA	-15	NA	9952408	9945541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9948002_9948757_9948914_9949100_9950173_9952321
WTC11_00063662	chr3	-	1222	4	NNC	ENSG00000163704.12	novel	1475	3	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	20.2374789822141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGGAGAAGTCATTTG	-9951097	True	NA	1	True	AATAAA	-17	NA	9952382	9948581	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9948914_9949100_9949381_9949623_9950173_9952321
WTC11_00063663	chr3	-	1471	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	4	0	-4	multi-exon	FALSE	canonical	3	44	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTGGGAGAAGTCATT	-9951105	True	NA	-1	True	AATAAA	-15	NA	9952390	9948583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9948914_9949100_9950173_9952321
WTC11_00063664	chr3	-	2777	8	FSM	ENSG00000125037.13	ENST00000245046.7	2353	8	-279	-145	-277	145	multi-exon	FALSE	canonical	3	395	junction_7	25.0420055270405	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	9987120	9962536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
WTC11_00063665	chr3	-	1884	7	FSM	ENSG00000125037.13	ENST00000487465.5	1909	7	0	25	0	-25	multi-exon	FALSE	canonical	3	395	junction_6	26.289520514625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTCTCAAAAAAAAAAAGAG	-9984657	True	NA	NA	False	NA	NA	NA	9986838	9968668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
WTC11_00063667	chr3	-	3507	1	Genic_Genomic	ENSG00000206567.10	novel	NA	NA	NA	NA	1485	559	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTGTCTACACTGACT	-10006975	False	NA	NA	False	NA	NA	NA	10006995	10003488	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_10003500_10007000
WTC11_00063668	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	2	3	junction_1	17	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-10025592	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10015527_10023559_10023748_10026040
WTC11_00063669	chr3	-	1150	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	49	-63	0	59	multi-exon	FALSE	canonical	2	6	junction_1	15.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTGTTGTCAAACTAT	-10025561	True	NA	63	True	NA	NA	NA	10026326	10017425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10018072_10023529_10023748_10026040
WTC11_00063670	chr3	-	1095	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	5	1	0	multi-exon	FALSE	canonical	3	15	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCTGTGTTCTTTGG	-10025600	True	NA	-1	True	AATAAA	-18	NA	10026365	10017489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10018072_10023559_10023748_10026040
WTC11_00063671	chr3	-	2376	6	FSM	ENSG00000157020.18	ENST00000479868.6	2374	6	0	-2	0	0	multi-exon	FALSE	canonical	3	1006	junction_4	63.7087121200861	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10298240	False	NA	-4	True	AATAAA	-17	NA	10313971	10300930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578
WTC11_00063672	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	365.144984047433	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305310	True	NA	-4	True	AATAAA	-17	NA	10321041	10300930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
WTC11_00063673	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	442.807987258865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305351	True	NA	-4	True	AATAAA	-17	NA	10321082	10300930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
WTC11_00063674	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_8	121.040734362445	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305381	True	NA	-4	True	AATAAA	-17	NA	10321112	10300930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
WTC11_00063676	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	428.242629825663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305330	True	NA	-23	True	ACTAAA	-2	NA	10321061	10300949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
WTC11_00063685	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	21.9928965804871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11642759	True	NA	-4	True	AATAAA	-15	NA	11643915	11556068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
WTC11_00063686	chr3	-	3723	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	3	-1	3	0	multi-exon	FALSE	canonical	3	23	junction_5	44.2013574452188	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11720525	True	NA	-4	True	AATAAA	-15	NA	11720743	11556068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
WTC11_00063687	chr3	-	937	4	FSM	ENSG00000144560.16	ENST00000451674.6	938	4	1	0	1	0	multi-exon	FALSE	canonical	3	8	junction_3	54.7803695577977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAACATCTGTCTAAT	-11582277	True	NA	-6	True	NA	NA	NA	11582390	11558342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11582285
WTC11_00063689	chr3	-	1233	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	-20	7	20	multi-exon	FALSE	canonical	3	175	junction_5	17.4027912375326	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGCTTGAATTCAAAGAT	NA	False	NA	19	True	AATAAA	-44	NA	11846772	11790421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
WTC11_00063690	chr3	-	1293	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	7	-3	7	3	multi-exon	FALSE	canonical	3	20	junction_1	71.3335280371174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTACTTTGACCCAT	NA	False	NA	2	True	AATAAA	-27	NA	11846912	11790438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
WTC11_00063691	chr3	-	1347	8	NNC	ENSG00000144559.11	novel	1326	8	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	68.8340210141729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGTGTTTGTTACT	NA	False	NA	-7	True	AATAAA	-18	NA	11846906	11790447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_11790582_11807832_11807896_11809516_11809683_11817185_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
WTC11_00063693	chr3	-	1218	6	NNC	ENSG00000157150.5	novel	1194	5	NA	NA	0	48502	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.9309717867937	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAATGTTTCACA	-12156465	True	NA	NA	False	AAAAAG	-5	NA	12158912	12104565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_12104593_12153070_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
WTC11_00063694	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	5.30919014539883	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	-12156465	True	NA	-24	True	CATAAA	-31	NA	12158912	12153067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
WTC11_00063695	chr3	-	3077	16	FSM	ENSG00000132155.14	ENST00000688543.1	4662	16	85	1500	-3	0	multi-exon	FALSE	canonical	3	50	junction_11	89.6349634164407	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656347	True	NA	-26	True	AATAAA	-22	NA	12664102	12583600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
WTC11_00063696	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_16	36.6461116627672	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
WTC11_00063698	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	14	junction_14	96.6267503794311	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-12656370	True	NA	NA	False	NA	NA	NA	12664125	12584332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
WTC11_00063701	chr3	-	534	5	NNC	ENSG00000144713.13	novel	2094	4	NA	NA	0	22094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6848.08591414419	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCACGGTGGCAC	-12641200	True	NA	NA	False	NA	NA	NA	12841543	12812390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_12812416_12836047_12836224_12839348_12839531_12840141_12840243_12841493
WTC11_00063702	chr3	-	661	1	FSM	ENSG00000272263.1	ENST00000606447.1	510	1	-157	6	-157	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATTTCATTTTTGAAA	-12632542	False	NA	0	True	AATAAA	-26	NA	12832885	12832224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12832200_12832900
WTC11_00063703	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	2364.05870391485	2147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-12641222	True	NA	-26	True	NA	NA	NA	12841565	12834484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
WTC11_00063704	chr3	-	1749	4	FSM	ENSG00000144713.13	ENST00000396957.5	1749	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7894.08894187431	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGATTTTGTTTTT	-12641239	True	NA	-9	True	CATAAA	-22	NA	12841582	12834945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
WTC11_00063705	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	7897.85063587978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	-12641202	True	NA	-35	True	AATAAA	-12	NA	12841545	12836049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
WTC11_00063706	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	16028	junction_1	687.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	-12641186	True	NA	-45	True	AATAAA	-2	NA	12841529	12836059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141
WTC11_00063707	chr3	-	631	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_2	2779.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTTTCCAAAATGTT	-12641200	True	NA	NA	False	NA	NA	NA	12841543	12839050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12839531_12840141_12840243_12841493
WTC11_00063708	chr3	-	7439	13	NIC	ENSG00000144711.16	novel	3744	13	NA	NA	-46	76	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	19.1418317363366	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACTTGTTGTGACTCTG	-12966382	True	NA	72	True	NA	NA	NA	12967714	12897143	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_12901523_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_12967386
WTC11_00063709	chr3	-	4033	16	FSM	ENSG00000144711.16	ENST00000648114.1	4198	16	165	0	165	0	multi-exon	FALSE	canonical	2	7	junction_15	37.816163504806	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGGTGGGCCTCAGAC	-13282519	False	NA	NA	False	NA	NA	NA	13283116	12900752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12901523_12902772_12902823_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_13047477_13047523_13164103_13164134_13282710
WTC11_00063710	chr3	-	3030	12	FSM	ENSG00000144711.16	ENST00000648386.1	3036	12	6	0	6	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6844677042221	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTTGGCCTAGAAC	-12994338	False	NA	NA	False	NA	NA	NA	12994378	12908348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_12994080
WTC11_00063711	chr3	-	7217	40	FSM	ENSG00000132182.12	ENST00000254508.7	7206	40	0	-11	0	11	multi-exon	FALSE	non_canonical	3	201	junction_31	51.8838915132007	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGAGATTTCTGTCT	-13415348	True	NA	-11	True	AATAAA	-31	NA	13420322	13316223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
WTC11_00063713	chr3	-	3136	20	FSM	ENSG00000132182.12	ENST00000420141.2	3134	20	0	-2	0	0	multi-exon	FALSE	non_canonical	3	201	junction_11	25.6726678118223	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAATTAGCTGGGCATG	-13415335	True	NA	NA	False	AATATA	-37	NA	13420309	13351660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
WTC11_00063714	chr3	-	440	2	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	25	-62235	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTACATATTTTTTT	-13415310	True	NA	0	True	AATAAA	-22	NA	13420284	13413897	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_13414113_13420059
WTC11_00063715	chr3	-	243	1	FSM	ENSG00000238138.1	ENST00000428249.1	105	1	51	-189	51	189	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCTTCTGACACAGCC	-13460317	False	NA	NA	False	NA	NA	NA	13460347	13460104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_13460100_13460300
WTC11_00063716	chr3	-	1448	4	NNC	ENSG00000163528.13	novel	1603	4	NA	NA	0	35281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.511986421743	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAATTAAT	-14120064	True	NA	NA	False	NA	NA	NA	14124870	14076795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14076812_14112077_14113195_14116425_14116525_14124654
WTC11_00063717	chr3	-	1453	4	NNC	ENSG00000163528.13	novel	1603	4	NA	NA	0	26261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.511986421743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATGTCCTGCTAGCCT	-14120064	True	NA	NA	False	NA	NA	NA	14124870	14085815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14085842_14112082_14113195_14116425_14116525_14124654
WTC11_00063718	chr3	-	1432	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	1	0	-1	multi-exon	FALSE	canonical	3	410	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATGTGTCCTTTGT	-14120064	True	NA	-2	True	ATTAAA	-22	NA	14124870	14112077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14113195_14116425_14116525_14124654
WTC11_00063719	chr3	-	1640	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	8	-45	8	45	multi-exon	FALSE	canonical	3	24	junction_3	174.568038311714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAGTATAAATTATG	-14120056	True	NA	44	True	NA	NA	NA	14124862	14112031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
WTC11_00063720	chr3	-	3662	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	-12	0	12	multi-exon	FALSE	canonical	3	268	junction_8	24.007776517898	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTCAGATTTTTT	-14173598	True	NA	1	True	AATAAA	-26	NA	14178601	14145134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
WTC11_00063721	chr3	-	2944	15	FSM	ENSG00000154767.15	ENST00000476581.6	2944	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	78.9766498687415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGTGAAGCCTTCAAAG	-14173598	True	NA	NA	False	NA	NA	NA	14178601	14145728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14170437_14170551_14172866_14173063_14178465
WTC11_00063722	chr3	-	1990	11	NNC	ENSG00000144596.13	novel	7724	24	NA	NA	-46939	4265	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	10.8004629530405	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCTTTCCTTTGTTGA	-14602191	True	NA	NA	False	AAAACA	-35	NA	14603014	14516426	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14517214_14517771_14517898_14520109_14520280_14520389_14520538_14521641_14521788_14522999_14523076_14523611_14523699_14524392_14524539_14525436_14525573_14525850_14525932_14602927
WTC11_00063723	chr3	-	4064	3	FSM	ENSG00000144596.13	ENST00000422481.5	4116	3	52	0	52	0	multi-exon	FALSE	canonical	3	42	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	14525931	14520691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14524539_14525436_14525573_14525850
WTC11_00063724	chr3	-	3745	2	FSM	ENSG00000225733.7	ENST00000440079.1	1527	2	22	-2240	22	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	-14943356	True	NA	-13	True	AATAAA	-14	NA	14947483	14942783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947109
WTC11_00063725	chr3	-	3837	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	0	-19	0	14	multi-exon	FALSE	canonical	3	109	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTATCCCCACCCCCT	-14947378	False	NA	1	True	AATAAA	-28	NA	14947538	14942769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947086
WTC11_00063726	chr3	-	3783	2	FSM	ENSG00000225733.7	ENST00000665449.1	3770	2	0	-13	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	-14948264	True	NA	-13	True	AATAAA	-14	NA	14948424	14942783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14948012
WTC11_00063727	chr3	-	4691	2	FSM	ENSG00000225733.7	ENST00000665738.1	3754	2	-924	-13	-9	0	multi-exon	FALSE	canonical	3	44	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	NA	False	NA	-13	True	AATAAA	-14	NA	14948433	14942783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947113
WTC11_00063728	chr3	-	823	2	FSM	ENSG00000131368.8	ENST00000496484.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATCCATGACATATT	-15049749	False	NA	-56	True	AATACA	-22	NA	15049967	15042459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15043023_15049707
WTC11_00063731	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	40.0860186210715	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-15049708	True	NA	NA	False	AATAAA	-21	NA	15065315	15048511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
WTC11_00063733	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-15049710	True	NA	NA	False	NA	NA	NA	15065317	15051716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15052634_15059368_15059476_15065060
WTC11_00063734	chr3	-	6666	14	NIC	ENSG00000131381.12	novel	6678	14	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	26.4185697645116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTGTGTGTGTCTGTGTG	-15096839	True	NA	-4	True	AATAAA	-18	NA	15099133	15070068	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15091338_15091494_15095972_15096289_15096534_15096711_15099034
WTC11_00063735	chr3	-	6682	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	-4	0	4	multi-exon	FALSE	canonical	3	46	junction_12	16.7579355043175	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTGTGTGTGTCTGTGTG	-15096854	True	NA	-4	True	AATAAA	-18	NA	15099148	15070068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
WTC11_00063736	chr3	-	6569	13	FSM	ENSG00000131381.12	ENST00000476527.6	3005	13	-32	-3532	-32	0	multi-exon	FALSE	canonical	3	60	junction_12	12.4498995979887	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGGTGTGTGTGTCTG	-15099182	False	NA	-8	True	AATAAA	-14	NA	15099195	15070072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
WTC11_00063737	chr3	-	1132	9	FSM	ENSG00000131381.12	ENST00000449964.6	1132	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	27.4499544626216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGACAACCTACAGTCTG	-15096854	True	NA	NA	False	NA	NA	NA	15099148	15078156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15078162_15080731_15080803_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
WTC11_00063738	chr3	-	591	4	FSM	ENSG00000131381.12	ENST00000463214.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACGATGACCGGATCCG	-15086102	False	NA	NA	False	NA	NA	NA	15086112	15082477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15082609_15084734_15084897_15084999_15085046_15085860
WTC11_00063740	chr3	-	903	3	FSM	ENSG00000131381.12	ENST00000449050.5	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-15096849	True	NA	NA	False	AGTAAA	-15	NA	15099143	15095670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15096289_15096534_15096711_15099034
WTC11_00063741	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	-15096842	True	NA	NA	False	NA	NA	NA	15099136	15095997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15096289_15096534_15096711_15099021
WTC11_00063742	chr3	-	3273	9	FSM	ENSG00000131370.16	ENST00000383791.8	3279	9	0	6	0	-6	multi-exon	FALSE	canonical	3	12	junction_7	4.02919036532155	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAAGTTCTTGGTTGGCC	-15331887	True	NA	NA	False	ATTAAA	-13	NA	15332586	15254358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304232_15330503_15330567_15332270
WTC11_00063744	chr3	-	2897	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	15	-294	3	294	multi-exon	FALSE	canonical	3	80	junction_2	66.5023307862213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTAAATTGGTCTGCT	-15424928	True	NA	NA	False	NA	NA	NA	15427529	15409465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00063746	chr3	-	1222	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	3	76	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	53.2743840884153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTTGTTGTTTT	-15424928	True	NA	39	True	NA	NA	NA	15427529	15413592	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00063749	chr3	-	2011	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	-2	0	2	multi-exon	FALSE	canonical	3	232	junction_12	21.5547993495648	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAAAAGTTATTCTGC	-15596573	True	NA	NA	False	ATTAAA	-23	NA	15601569	15560696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
WTC11_00063752	chr3	-	6579	28	FSM	ENSG00000206560.12	ENST00000399451.6	6564	28	0	-15	0	15	multi-exon	FALSE	canonical	3	136	junction_27	26.4415394192303	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACATGCAAACTTCTTT	-15859760	False	NA	NA	False	AATAAA	-34	NA	15859771	15667220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376
WTC11_00063753	chr3	-	6690	29	NIC	ENSG00000206560.12	novel	4408	29	NA	NA	-59	0	intron_retention	FALSE	canonical	3	35	junction_28	46.9806055294987	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAAGTGTCTGTCTCTT	-15856564	True	NA	NA	False	AATAAA	-16	NA	15859830	15667238	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15814239_15814310_15859376
WTC11_00063754	chr3	-	6384	28	NIC	ENSG00000206560.12	novel	6564	28	NA	NA	49	0	intron_retention	FALSE	canonical	3	15	junction_23	58.6975461193989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTGTCTCTTTTA	-15859711	False	NA	NA	False	AATAAA	-19	NA	15859722	15667235	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15751749_15751821_15766233_15766313_15795222_15795307_15814239_15814310_15859376
WTC11_00063756	chr3	-	742	5	FSM	ENSG00000206560.12	ENST00000463533.1	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	11.1214882097676	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAATTCAACTATGTAT	-15686431	False	NA	NA	False	NA	NA	NA	15686453	15679300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221
WTC11_00063758	chr3	-	557	5	FSM	ENSG00000206560.12	ENST00000460278.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	84.2833761782239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTGATGTAGG	-15756443	False	NA	NA	False	NA	NA	NA	15756548	15724396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15756479
WTC11_00063759	chr3	-	592	6	FSM	ENSG00000206560.12	ENST00000439830.5	592	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	69.2473826220168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGTAGGTGGCATTCA	-15859458	False	NA	NA	False	NA	NA	NA	15859469	15737038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15814239_15814310_15859376
WTC11_00063760	chr3	-	4062	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	-73	30	-47	-30	multi-exon	FALSE	canonical	3	439	junction_2	2	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAGAATAAAGGTTAATT	-16258404	True	NA	-29	True	NA	NA	NA	16265016	16257090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16260830_16264154_16264230_16264768
WTC11_00063761	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-16258357	True	NA	0	True	AATAAA	-40	NA	16264969	16257978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16260830_16264768
WTC11_00063762	chr3	-	2986	10	FSM	ENSG00000131378.14	ENST00000334133.9	2986	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGAGTGTTTATCGTGT	-16513503	True	NA	0	True	AATAAA	-26	NA	16513699	16315844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16317233_16323375_16323458_16326772_16326877_16357931_16358048_16370075_16370280_16377717_16378103_16409374_16409484_16433850_16434038_16493724_16493878_16513441
WTC11_00063763	chr3	-	2977	11	FSM	ENSG00000092345.14	ENST00000399444.7	2974	11	0	-3	0	3	multi-exon	TRUE	canonical	2	4	junction_10	4.41021541423999	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGCATTCTGATGTAA	-16605383	True	NA	0	True	AATAAA	-26	NA	16605423	16586788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16588714_16592049_16592149_16593654_16593769_16594532_16594584_16595313_16595386_16596749_16596890_16596987_16597052_16597489_16597542_16598086_16598179_16598451_16598599_16605202
WTC11_00063764	chr3	-	6816	23	NIC	ENSG00000131374.14	novel	3156	22	NA	NA	-137	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_21	23.8440612354177	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATAGCTTGACTTATTC	-17742762	True	NA	0	True	AATAAA	-19	NA	17742885	17157163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17562018_17562143_17623848_17623914_17742480
WTC11_00063765	chr3	-	3156	22	FSM	ENSG00000131374.14	ENST00000429383.8	3156	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	24.5141451137419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTACTGACCTCTCAA	-17742446	False	NA	NA	False	AAAAAG	-7	NA	17742498	17160371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17562018_17562143_17742480
WTC11_00063767	chr3	-	592	6	FSM	ENSG00000131374.14	ENST00000412981.5	592	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	19.34528366295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTCGTCTTTGTTCA	-17739524	True	NA	NA	False	NA	NA	NA	17742601	17404693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17404769_17404871_17404962_17406417_17406527_17508473_17508606_17623848_17623914_17742480
WTC11_00063770	chr3	-	557	6	FSM	ENSG00000131374.14	ENST00000446863.5	557	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	27.8452868543314	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGAAGCAGCAGGTTC	-17739498	True	NA	NA	False	NA	NA	NA	17742575	17406455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17406527_17428449_17428520_17508473_17508606_17562018_17562143_17623848_17623914_17742480
WTC11_00063771	chr3	-	908	1	FSM	ENSG00000213383.2	ENST00000393779.2	870	1	20	-58	20	58	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTAGCTTTTCAAAGCT	NA	False	NA	NA	False	AATACA	-39	NA	17872578	17871670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17871700_17872600
WTC11_00063772	chr3	-	715	1	FSM	ENSG00000214286.2	ENST00000417487.1	715	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTGCAGCTGCTATC	NA	False	NA	NA	False	NA	NA	NA	17878169	17877454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17877500_17878200
WTC11_00063773	chr3	-	8303	11	FSM	ENSG00000182568.17	ENST00000338745.11	7822	11	-148	-333	-118	333	multi-exon	FALSE	canonical	3	49	junction_3	7.66093989011792	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATCAGAAATACTTGCT	-18425463	False	NA	NA	False	AGTAAA	-24	NA	18425487	18345043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
WTC11_00063774	chr3	-	6239	11	NIC	ENSG00000182568.17	novel	7822	11	NA	NA	57	-80	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	17.6422787643774	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGTATGTCCTGAATA	-18443948	True	NA	-84	True	ATTAAA	-13	NA	18444816	18345456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18444606
WTC11_00063776	chr3	-	2618	9	FSM	ENSG00000129810.15	ENST00000263753.8	2338	9	-44	-236	-29	236	multi-exon	FALSE	canonical	2	6	junction_1	77.4966733156979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGCACTATACTAGTAA	-20179773	True	NA	NA	False	NA	NA	NA	20186235	20160356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
WTC11_00063782	chr3	-	3362	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	79	-371	0	368	multi-exon	FALSE	canonical	3	139	junction_3	45.4182378184206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCTATCCGCCACA	-20179665	True	NA	NA	False	NA	NA	NA	20186127	20169112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
WTC11_00063785	chr3	-	3041	8	NNC	ENSG00000129810.15	novel	3070	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	6	junction_7	80.4094115722019	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGCTTTCCTTCTAT	-20179728	True	NA	-4	True	AATAAA	-14	NA	20186190	20169484	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185959
WTC11_00063786	chr3	-	2944	8	ISM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	8891	0	0	5prime_fragment	FALSE	canonical	3	122	junction_7	48.9752123892427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-20179729	True	NA	-3	True	AATAAA	-15	NA	20186191	20169483	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
WTC11_00063787	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	72.4557570845401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179729	True	NA	-15	True	AATAAA	-33	NA	20186191	20170484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
WTC11_00063788	chr3	-	10297	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	181	0	-181	multi-exon	FALSE	canonical	2	9	junction_3	9.64682458064808	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTATTCCACTTGTTT	-21750568	True	NA	NA	False	NA	NA	NA	21751210	21412398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
WTC11_00063790	chr3	-	1898	5	FSM	ENSG00000197885.11	ENST00000437230.5	1898	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.1074239545812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATTAAAACATCAAGTAA	-23915442	True	NA	NA	False	NA	NA	NA	23916969	23892096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916783
WTC11_00063791	chr3	-	1647	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.0438928839829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-23915397	True	NA	-30	True	NA	NA	NA	23916924	23892306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
WTC11_00063793	chr3	-	5977	36	FSM	ENSG00000077097.16	ENST00000264331.9	5814	36	0	-163	0	163	multi-exon	TRUE	canonical	3	149	junction_35	173.128052172314	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAAGTACATCACAGAC	-25653634	True	NA	NA	False	NA	NA	NA	25664907	25597820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645471_25664228
WTC11_00063795	chr3	-	5391	36	FSM	ENSG00000077097.16	ENST00000435706.6	5389	36	0	-2	0	0	multi-exon	FALSE	canonical	3	558	junction_35	140.945072526101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTCTCTTTACTGAA	-25653226	False	NA	-9	True	ATTAAA	-13	NA	25664499	25597983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
WTC11_00063798	chr3	-	437	1	FSM	ENSG00000283971.1	ENST00000583412.1	67	1	3	-373	3	373	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGGCAGCCGGCGGCG	-25653663	True	NA	NA	False	NA	NA	NA	25664936	25664499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25664500_25664900
WTC11_00063799	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	18.3370644838343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-25779333	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
WTC11_00063800	chr3	-	2547	13	FSM	ENSG00000151092.18	ENST00000675217.1	2532	13	0	-15	0	14	multi-exon	FALSE	canonical	2	3	junction_8	112.690671752368	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTGGCTAAATAAAAA	-25779284	True	NA	13	True	AATAAA	-33	NA	25783394	25718929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25740402_25740451_25751097_25751264_25764065_25764312_25778573_25778689_25783259
WTC11_00063803	chr3	-	3205	4	FSM	ENSG00000151092.18	ENST00000496726.5	3196	4	0	-9	0	0	multi-exon	FALSE	canonical	2	19	junction_3	142.043029474248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	NA	False	NA	-17	True	AATAAA	-20	NA	25736346	25719269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25733871
WTC11_00063804	chr3	-	3058	11	FSM	ENSG00000151092.18	ENST00000493324.5	3058	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	82.5891033974822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	-25779304	True	NA	-17	True	AATAAA	-20	NA	25783414	25719269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
WTC11_00063805	chr3	-	2025	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	-1	0	0	multi-exon	FALSE	canonical	3	39	junction_1	79.6557593649072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	-25779328	True	NA	-17	True	AATAAA	-20	NA	25783438	25719269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
WTC11_00063806	chr3	-	3973	4	FSM	ENSG00000225386.2	ENST00000435884.2	5776	4	0	1803	0	-1803	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACATTTTAATTTCCA	NA	False	NA	NA	False	NA	NA	NA	26622943	26616063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_26619507_26619701_26619849_26620932_26620973_26622600
WTC11_00063807	chr3	-	8191	19	ISM	ENSG00000033867.17	ENST00000454389.6	8079	26	58716	-4	-1166	2	3prime_fragment	FALSE	canonical	3	119	junction_18	23.5249407970811	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTATTGTCTTTACTTT	-27425658	False	NA	-5	True	AATAAA	-19	NA	27425668	27372718	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036
WTC11_00063808	chr3	-	7853	25	FSM	ENSG00000033867.17	ENST00000455077.5	3775	25	-73	-4005	0	120	multi-exon	FALSE	canonical	3	88	junction_24	35.7520152889627	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGGCTTCAGTAGGAGA	-27474166	True	NA	NA	False	NA	NA	NA	27484420	27372600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
WTC11_00063810	chr3	-	3600	24	FSM	ENSG00000033867.17	ENST00000457377.5	3600	24	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	47.0909107497009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTAATGAAATGCTC	-27474093	True	NA	-66	True	TTTAAA	-39	NA	27484347	27376605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
WTC11_00063811	chr3	-	3667	24	FSM	ENSG00000033867.17	ENST00000437179.5	3667	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	43.3629340032316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTAATGAAATGCTC	-27474093	True	NA	-66	True	TTTAAA	-39	NA	27484347	27376605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
WTC11_00063813	chr3	-	574	2	FSM	ENSG00000033867.17	ENST00000491211.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCTGTCCTCCTTAC	-27424492	False	NA	NA	False	NA	NA	NA	27424502	27421671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27421780_27424036
WTC11_00063815	chr3	-	3286	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	-22	0	-22	0	multi-exon	FALSE	canonical	2	3	junction_1	1.09544511501033	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	NA	False	NA	-7	True	AATAAA	-19	NA	27722345	27715952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
WTC11_00063816	chr3	-	3095	6	FSM	ENSG00000163508.13	ENST00000295743.8	3386	6	257	34	82	-30	multi-exon	FALSE	canonical	1	1	junction_1	1.85472369909914	3814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAATAAATGTGGTTC	-27722221	False	NA	-37	True	NA	NA	NA	27722241	27715982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27717752_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
WTC11_00063817	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	37.9881829101673	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	-28348078	True	NA	-17	True	AATAAA	-39	NA	28348824	28321046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
WTC11_00063818	chr3	-	439	2	FSM	ENSG00000163512.14	ENST00000476174.2	439	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAATTCCTGGGTATTTC	-28326986	False	NA	NA	False	NA	NA	NA	28327002	28324186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28324455_28326831
WTC11_00063819	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	32.9110754745099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	-28348928	False	NA	NA	False	NA	NA	NA	28348972	28326489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
WTC11_00063820	chr3	-	4930	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	-421	-3566	0	-1633	multi-exon	FALSE	canonical	3	72	junction_1	40.1524871237414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAGCAGATTTTTCTGA	NA	False	NA	NA	False	AATATA	-31	NA	28349050	28328122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
WTC11_00063821	chr3	-	1369	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	-3	0	1	multi-exon	FALSE	canonical	3	43	junction_1	50.4405590769968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTTTATCATTTGGC	NA	False	NA	-13	True	AATAAA	-17	NA	28349050	28331687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
WTC11_00063823	chr3	-	7747	8	FSM	ENSG00000144645.15	ENST00000429492.6	7723	8	0	-24	0	24	multi-exon	FALSE	canonical	3	187	junction_7	19.4380229111368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTGTTCTTGATCT	-31830056	True	NA	NA	False	NA	NA	NA	31830074	31657887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039
WTC11_00063824	chr3	-	6392	12	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	56.2669258281342	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTGTTCTTGATCT	-31959436	True	NA	NA	False	NA	NA	NA	31960336	31657887	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31960142
WTC11_00063825	chr3	-	3625	12	FSM	ENSG00000144645.15	ENST00000396556.7	3625	12	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_11	24.3788961709179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-31981234	False	NA	NA	False	AATATA	-16	NA	31981262	31660824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
WTC11_00063827	chr3	-	639	1	FSM	ENSG00000261572.1	ENST00000565519.1	1891	1	-94	1346	-94	-1346	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGACCGGTGGAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	32238672	32238033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32238000_32238700
WTC11_00063829	chr3	-	2488	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	-3	0	3	multi-exon	FALSE	canonical	3	286	junction_9	47.9409358829522	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCATTCTCTTATGT	-32562944	True	NA	2	True	AATAAA	-32	NA	32570858	32525970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
WTC11_00063830	chr3	-	605	2	FSM	ENSG00000144635.9	ENST00000474077.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGCATGATGAAGACAG	-32562944	True	NA	38	True	AATAGA	-41	NA	32570858	32545873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32545966_32570345
WTC11_00063831	chr3	-	342	1	FSM	ENSG00000237676.1	ENST00000429309.1	333	1	0	-9	0	9	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAAAATTTTCCTTTAA	NA	False	NA	NA	False	AGTAAA	-2	NA	32635554	32635212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32635200_32635600
WTC11_00063832	chr3	-	2335	17	NNC	ENSG00000170266.16	novel	2523	16	NA	NA	0	3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.404855645981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGATGTGGTGGTGC	-33097030	False	NA	NA	False	NA	NA	NA	33097043	32993522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32993552_32996730_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
WTC11_00063833	chr3	-	2513	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	-1	0	1	multi-exon	FALSE	canonical	3	73	junction_15	91.1371615874788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTGATCTGTGGA	-33096822	False	NA	1	True	AATAAA	-39	NA	33096835	32996607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
WTC11_00063834	chr3	-	2530	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	-7	0	-1	multi-exon	FALSE	canonical	3	384	junction_6	25.2899628750661	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGGTTTGATCTGTG	-33093433	True	NA	-1	True	AATAAA	-37	NA	33097146	32996609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
WTC11_00063835	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	151.463325227228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-33093433	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
WTC11_00063847	chr3	-	729	4	FSM	ENSG00000173705.9	ENST00000412539.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.71722460186015	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTGGATGATGACACC	-33218590	True	NA	NA	False	NA	NA	NA	33218793	33153709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33154034_33207807_33207927_33213927_33214106_33218685
WTC11_00063848	chr3	-	3672	15	FSM	ENSG00000153560.12	ENST00000447368.6	3669	15	0	-3	0	0	multi-exon	FALSE	canonical	3	151	junction_8	42.2553583125554	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439997	False	33	-1	True	AATAAA	-23	NA	33440010	33388335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
WTC11_00063849	chr3	-	3867	14	NIC	ENSG00000153560.12	novel	4175	16	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_13	82.1304345783198	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439086	True	NA	-1	True	AATAAA	-23	NA	33440357	33388335	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33439735
WTC11_00063850	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	54.3472783740517	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439134	True	NA	-1	True	AATAAA	-23	NA	33440405	33388335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
WTC11_00063856	chr3	-	4945	2	FSM	ENSG00000163539.18	ENST00000464961.1	6273	2	1328	0	1328	0	multi-exon	FALSE	canonical	3	191	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTATTTCTTCTGGGT	-33504111	False	NA	0	True	ATTAAA	-24	NA	33504123	33496244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33498718_33501651
WTC11_00063857	chr3	-	7082	36	NIC	ENSG00000163539.18	novel	7159	39	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_12	24.9745012820219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTATTTCTTCTGGGT	-33714138	True	NA	0	True	ATTAAA	-24	NA	33718222	33496244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
WTC11_00063862	chr3	-	5363	5	FSM	ENSG00000163673.8	ENST00000636136.2	5651	5	204	84	204	-83	multi-exon	FALSE	canonical	1	2	junction_1	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAACTTACCAAATTGT	-36764321	False	NA	NA	False	NA	NA	NA	36764349	36712504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36715522_36718009_36718178_36721526_36721660_36737207_36739085_36764181
WTC11_00063863	chr3	-	383	1	FSM	ENSG00000281100.1	ENST00000631338.1	2008	1	1145	480	1145	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTTAATCTCAGTCAT	NA	False	NA	-54	True	AATATA	-2	NA	36824013	36823630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36823600_36824000
WTC11_00063867	chr3	-	4766	6	FSM	ENSG00000093167.18	ENST00000496479.5	3585	6	0	-1181	0	120	multi-exon	FALSE	canonical	3	132	junction_5	19.041008376659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGCACGATCTCGGCT	NA	False	NA	NA	False	NA	NA	NA	37068763	37052505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809
WTC11_00063868	chr3	-	2821	14	FSM	ENSG00000093167.18	ENST00000354379.8	2821	14	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	22.646498743193	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAAATCTCTAATAT	-37173394	True	NA	-37	True	AATAAA	-28	NA	37176360	37052655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
WTC11_00063869	chr3	-	2522	15	FSM	ENSG00000093167.18	ENST00000421276.6	2522	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	39.4202889851593	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-37173371	True	NA	0	True	ATTAAA	-23	NA	37176337	37053003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
WTC11_00063873	chr3	-	274	2	FSM	ENSG00000235257.10	ENST00000594579.1	670	2	396	0	-8	0	multi-exon	FALSE	canonical	2	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGTTTGATGTCTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37834767	37820915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37821101_37834678
WTC11_00063874	chr3	-	2653	15	FSM	ENSG00000187091.14	ENST00000334661.5	2651	15	0	-2	0	2	multi-exon	FALSE	canonical	3	49	junction_14	12.318270816895	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTCTCTTTACCTGG	-38028815	True	NA	1	True	TATAAA	-20	NA	38029642	38007493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
WTC11_00063875	chr3	-	2977	15	FSM	ENSG00000187091.14	ENST00000463876.5	2963	15	-10	-4	-10	2	multi-exon	TRUE	canonical	3	21	junction_14	17.6804111596849	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTCTCTTTACCTGG	-38023970	False	NA	1	True	TATAAA	-20	NA	38024797	38007493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38024336
WTC11_00063876	chr3	-	1890	10	FSM	ENSG00000060971.19	ENST00000411549.5	1944	10	55	-1	-50	1	multi-exon	FALSE	canonical	3	53	junction_6	58.0308559898403	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGTTTTTTTCCAA	NA	False	NA	-1	True	AGTAAA	-21	NA	38137187	38122708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
WTC11_00063877	chr3	-	1478	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	63.878321831432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	-38132926	True	NA	-2	True	AGTAAA	-20	NA	38137081	38122709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
WTC11_00063878	chr3	-	1613	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	68.7491090851365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	-38132962	True	NA	-2	True	AGTAAA	-20	NA	38137117	38122709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
WTC11_00063879	chr3	-	1705	12	FSM	ENSG00000060971.19	ENST00000333167.13	1699	12	0	-6	0	1	multi-exon	FALSE	canonical	3	139	junction_4	40.4814006878825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGTTTTTTTCCAA	-38132972	True	NA	-1	True	AGTAAA	-21	NA	38137127	38122708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
WTC11_00063884	chr3	-	2452	2	FSM	ENSG00000229589.1	ENST00000441531.1	2517	2	65	0	65	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCATCTCAGTGATT	-38454740	False	NA	-1	True	ATTAAA	-18	NA	38454755	38451026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38453226_38454502
WTC11_00063886	chr3	-	4879	10	NNC	ENSG00000183873.18	novel	6284	26	NA	NA	-22186	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCTCTGTCCTTGTGC	NA	False	NA	-2	True	AATAAA	-18	NA	38576735	38548056	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_38551559_38554278_38554550_38555655_38555757_38556436_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660
WTC11_00063887	chr3	-	3310	18	NNC	ENSG00000183873.18	novel	8519	28	NA	NA	-8	-27957	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.2798220064566	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGGTGGGCCCTCACC	-38648312	True	NA	NA	False	NA	NA	NA	38649695	38580937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_38581148_38581275_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
WTC11_00063888	chr3	-	692	2	ISM	ENSG00000183873.18	ENST00000491944.1	1382	6	-22	18805	-8	278	5prime_fragment	FALSE	canonical	3	55	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGCTGGTTTGGTGTA	-38648312	True	NA	-4	True	AATAAA	-19	NA	38649695	38632832	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_38633360_38649530
WTC11_00063889	chr3	-	2879	9	FSM	ENSG00000114745.14	ENST00000453680.5	2873	9	0	-6	0	0	multi-exon	FALSE	canonical	2	10	junction_4	56.9526941856134	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCTTTATTCTAT	-39105152	True	NA	-19	True	AATAAA	-26	NA	39107569	39096658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
WTC11_00063892	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	18.3196445107431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-39105210	True	NA	0	True	AATACA	-25	NA	39107627	39096598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
WTC11_00063893	chr3	-	572	2	FSM	ENSG00000114745.14	ENST00000476334.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACCTCTGCAGCCTCAC	-39099196	False	NA	NA	False	NA	NA	NA	39099209	39098386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740
WTC11_00063894	chr3	-	826	7	FSM	ENSG00000114745.14	ENST00000419156.5	814	7	0	-12	0	0	multi-exon	FALSE	canonical	2	6	junction_5	78.0249247925872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTCAGCCCCCACC	-39103498	False	NA	NA	False	NA	NA	NA	39103511	39099398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39101509_39101571_39102677_39102882_39103472
WTC11_00063896	chr3	-	543	2	FSM	ENSG00000114745.14	ENST00000479124.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGACTGTAACTCCCA	-39101459	False	NA	NA	False	NA	NA	NA	39101472	39100791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39100878_39101015
WTC11_00063900	chr3	-	3098	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-99	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	15.6104932657492	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTATGTATTTGTGG	-39154193	True	NA	0	True	AATAAA	-18	NA	39154661	39141852	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
WTC11_00063901	chr3	-	3177	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	-99	-485	-99	2	multi-exon	FALSE	canonical	3	18	junction_4	12.1937483982572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTATGTATTTGTGG	-39154193	True	NA	0	True	AATAAA	-18	NA	39154661	39141852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
WTC11_00063902	chr3	-	1714	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	134	353	-9	-353	multi-exon	FALSE	canonical	3	62	junction_1	0.5	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTTCCTGGGCCCCCA	-40452661	True	NA	NA	False	NA	NA	NA	40453195	40445285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_40446848_40451704_40451783_40453121
WTC11_00063904	chr3	-	1907	18	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	7.66152477890115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGACTCCGTGTGGCAG	-41960084	True	NA	-1	True	AATAAA	-19	NA	41962088	41882150	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
WTC11_00063905	chr3	-	636	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	41	-30	-12	30	multi-exon	FALSE	canonical	2	11	junction_1	11.5758369027902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTTGTAGGTATAT	-41960085	True	NA	NA	False	NA	NA	NA	41962089	41937064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
WTC11_00063909	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	50.7195447753844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579868	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
WTC11_00063910	chr3	-	1582	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	26	0	-15	0	multi-exon	FALSE	canonical	3	115	junction_1	35.8406969178273	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-42579903	True	NA	-24	True	AATAAA	-16	NA	42582002	42547970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
WTC11_00063911	chr3	-	1446	8	FSM	ENSG00000093183.14	ENST00000449617.5	1446	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	75.7301870094733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATACTTGCTGTTCA	-42579863	True	NA	NA	False	NA	NA	NA	42581962	42548182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563881_42568864_42569074_42581845
WTC11_00063914	chr3	-	2769	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	-41	-6	-41	6	multi-exon	FALSE	canonical	3	2432	junction_3	336.14679333093	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGTGACATTTTTCTT	-42778529	True	NA	2	True	ATTAAA	-23	NA	42804531	42782901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
WTC11_00063920	chr3	-	2430	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	-11	0	0	multi-exon	FALSE	canonical	2	11	junction_10	55.3238400034494	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43619088	True	NA	-34	True	ATTAAA	-6	NA	43621984	43366347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
WTC11_00063924	chr3	-	376	1	FSM	ENSG00000271937.1	ENST00000607510.1	612	1	238	-2	238	2	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGCTTGTGTTGTTT	-44338218	True	NA	NA	False	TATAAA	-24	NA	44338314	44337938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44337900_44338300
WTC11_00063926	chr3	-	1099	5	FSM	ENSG00000185219.18	ENST00000460529.1	1312	5	0	213	0	-213	multi-exon	FALSE	canonical	3	29	junction_2	4.32290411644765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGACCAGATCACTTAAT	NA	False	NA	NA	False	NA	NA	NA	44458264	44450335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44450574_44450867_44450963_44451313_44451483_44455120_44455697_44458243
WTC11_00063927	chr3	-	1749	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	6	-213	intron_retention	FALSE	canonical	3	9	junction_3	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGGTTTTCTGAGACA	-44506617	True	NA	NA	False	NA	NA	NA	44510630	44499182	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44500635_44502541_44502669_44502964_44503057_44510552
WTC11_00063928	chr3	-	1320	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	6	0	6	0	multi-exon	FALSE	canonical	3	24	junction_2	9	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-44506617	True	NA	NA	False	TATAAA	-19	NA	44510630	44499522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44500638_44502541_44502669_44510552
WTC11_00063931	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	4	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-44755778	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44753553_44754223_44754369_44761494
WTC11_00063932	chr3	-	3966	8	NIC	ENSG00000163812.15	novel	3902	7	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	3	40	junction_3	93.300480126507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-44970211	True	NA	1	True	AATAAA	-25	NA	44976162	44915256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44918144_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
WTC11_00063933	chr3	-	11941	8	NIC	ENSG00000163812.15	novel	3902	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	77.473366062019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-44970215	True	NA	1	True	AATAAA	-25	NA	44976166	44915256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44918144_44918792_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
WTC11_00063934	chr3	-	3902	7	FSM	ENSG00000163812.15	ENST00000339420.7	3902	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	70.3974825938794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-44970231	True	NA	1	True	AATAAA	-25	NA	44976182	44915256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44918144_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
WTC11_00063936	chr3	-	12674	8	FSM	ENSG00000163812.15	ENST00000296127.7	3101	8	16	-9589	0	0	multi-exon	FALSE	canonical	3	40	junction_3	82.630725125064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-44970215	True	NA	1	True	AATAAA	-25	NA	44976166	44915256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44926848_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
WTC11_00063939	chr3	-	5966	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	-3	0	3	multi-exon	FALSE	canonical	3	75	junction_2	13.2641433948823	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCAAGTCTCCCTG	-45145603	True	NA	1	True	AATAAA	-28	NA	45146378	45082273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
WTC11_00063940	chr3	-	1438	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	-35	13	-35	-13	multi-exon	FALSE	canonical	3	104	junction_1	3.29983164553722	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTAACGAAGGCATTG	NA	False	NA	-10	True	AATAAA	-29	NA	45146457	45110228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
WTC11_00063942	chr3	-	1822	1	FSM	ENSG00000249992.2	ENST00000503771.2	1822	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTGTATGTAGCTTTT	-45225617	True	NA	-3	True	AATACA	-15	NA	45226287	45224465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45224500_45226300
WTC11_00063944	chr3	-	4017	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	3	6	0	-2	multi-exon	FALSE	canonical	3	35	junction_7	8.73194786861711	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATGGAACTTGGAAAA	-45840745	True	NA	NA	False	ATTAAA	-19	NA	45842116	45823321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
WTC11_00063948	chr3	-	8514	18	FSM	ENSG00000163820.16	ENST00000296137.7	8514	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	8.28973601409544	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCTCTCATTTTT	-45994359	True	NA	-1	True	AATAAA	-20	NA	45995824	45917902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45921841_45923655_45923766_45931070_45931282_45936447_45936544_45955248_45955394_45958407_45958620_45959392_45959543_45962224_45962393_45964335_45964455_45965032_45965126_45966276_45968704_45969674_45969766_45973087_45973232_45975238_45975346_45979704_45979831_45981569_45981677_45984855_45985023_45995721
WTC11_00063952	chr3	-	1065	5	FSM	ENSG00000178038.17	ENST00000498817.5	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	2.27760839478607	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTTGGCCACTAGCCC	NA	False	NA	NA	False	NA	NA	NA	46674698	46670783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46671065_46671487_46672034_46672139_46672202_46673338_46673382_46674565
WTC11_00063953	chr3	-	1550	13	ISM	ENSG00000178038.17	ENST00000450172.5	6593	22	5	10592	0	-9703	5prime_fragment	FALSE	canonical	3	13	junction_12	5.04975246918104	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGATTGTTGCAGGACA	-46693170	True	NA	NA	False	NA	NA	NA	46693676	46681190	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_46681408_46681499_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
WTC11_00063955	chr3	-	841	7	FSM	ENSG00000160799.12	ENST00000683445.1	841	7	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	29.3711876958809	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTGTCAGATATTTCC	-46969193	True	NA	-12	True	AGTAAA	-16	NA	46976745	46921729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46922140_46922235_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976636
WTC11_00063961	chr3	-	8564	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	0	-23	0	15	multi-exon	FALSE	canonical	3	57	junction_20	28.4321560912992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATCAAGCATATTTGTG	-47163203	True	NA	4	True	AATAAA	-37	NA	47164113	47016412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
WTC11_00063962	chr3	-	743	4	FSM	ENSG00000181555.22	ENST00000492397.1	746	4	0	3	0	-3	multi-exon	FALSE	canonical	3	7	junction_2	69.344550374681	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCCTGTGTGAGTT	-47083921	False	NA	NA	False	AAAAAG	-13	NA	47083946	47062162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47062347_47067069_47067119_47080800_47081084_47083719
WTC11_00063965	chr3	-	634	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	-1	0	1	multi-exon	FALSE	canonical	3	86	junction_2	5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGTTTGTCTGTCTCC	-47282457	True	NA	-3	True	AATAAA	-23	NA	47282766	47275226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47275491_47277281_47277380_47282494
WTC11_00063967	chr3	-	4251	23	FSM	ENSG00000114650.21	ENST00000265565.10	4254	23	0	3	0	-3	multi-exon	TRUE	canonical	3	47	junction_7	116.378026453976	3595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTGTCTCTTGGAAT	-47470263	True	NA	-2	True	ATTAAA	-45	NA	47475941	47413683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
WTC11_00063968	chr3	-	4215	23	NIC	ENSG00000114650.21	novel	4254	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	342	junction_17	81.158616759899	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-47470259	True	NA	-31	True	ATTAAA	-16	NA	47475937	47413712	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
WTC11_00063969	chr3	-	3430	18	FSM	ENSG00000114650.21	ENST00000320017.10	3430	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_15	132.323186197795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-47470259	True	NA	-31	True	ATTAAA	-16	NA	47475937	47413712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47435007_47435138_47442871_47443092_47475798
WTC11_00063970	chr3	-	3748	20	FSM	ENSG00000114650.21	ENST00000441517.6	3748	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_17	120.634403383854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-47470277	True	NA	-31	True	ATTAAA	-16	NA	47475955	47413712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
WTC11_00063979	chr3	-	1281	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	-4	0	3	multi-exon	FALSE	canonical	3	41	junction_4	100.633195318443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGGTTGTCTTGTTC	-47512244	True	NA	2	True	AATAAA	-22	NA	47513709	47495636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
WTC11_00063985	chr3	-	2152	5	FSM	ENSG00000114646.10	ENST00000264723.9	2154	5	0	2	0	-1	multi-exon	TRUE	canonical	3	12	junction_1	2.8613807855649	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTTTCTTAGTCTTT	-47578644	True	NA	-5	True	AATAAA	-15	NA	47578865	47562239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832_47577929_47578596
WTC11_00063986	chr3	-	6354	28	FSM	ENSG00000173473.11	ENST00000254480.10	6354	28	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_25	68.470233236832	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAATTATTTTT	-47763802	True	NA	69	True	TATAAA	-1	NA	47781893	47585268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47588307_47590660_47590838_47610065_47610328_47622206_47622342_47635189_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
WTC11_00063991	chr3	-	5881	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	433	-1172	0	0	multi-exon	FALSE	canonical	3	351	junction_6	68.2615928742393	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGGCTTCGTGCTTCTG	-48074672	True	NA	-20	True	AATAAA	-23	NA	48088839	47850695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00063992	chr3	-	5590	18	FSM	ENSG00000047849.22	ENST00000395734.7	5590	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	128.466171007879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGGCTTCGTGCTTCTG	-48074672	True	NA	-20	True	AATAAA	-23	NA	48088839	47850695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47852939_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00063997	chr3	-	3663	14	FSM	ENSG00000164045.12	ENST00000351231.7	3663	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	74.9470029716857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183102	True	NA	30	True	NA	NA	NA	48188356	48157145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
WTC11_00063998	chr3	-	3844	15	FSM	ENSG00000164045.12	ENST00000302506.8	3844	15	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_11	43.8434715778758	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183163	True	NA	30	True	NA	NA	NA	48188417	48157145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
WTC11_00063999	chr3	-	3647	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	3	111	junction_15	61.6353433961031	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTAGTTCTTGATGGA	-48183148	True	NA	2	True	AATAAA	-20	NA	48188402	48157173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
WTC11_00064000	chr3	-	3674	14	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	0	-32	intron_retention	FALSE	canonical	3	65	junction_9	85.5363170732849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGCCTAGTTCTTGA	-48183148	True	NA	-2	True	AATAAA	-16	NA	48188402	48157177	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
WTC11_00064004	chr3	-	2918	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	33	-947	0	0	multi-exon	FALSE	canonical	3	37	junction_5	44.5448089007013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	-48299629	True	NA	NA	False	AATAAA	-21	NA	48301325	48292316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
WTC11_00064006	chr3	-	1914	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	-5	-1296	0	-116	multi-exon	FALSE	canonical	2	15	junction_5	51.9669125501987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTTGAGTTGAAAATT	-48299662	True	NA	NA	False	NA	NA	NA	48301358	48293379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
WTC11_00064007	chr3	-	1320	6	FSM	ENSG00000172113.10	ENST00000643457.1	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	47.1889817648145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGCTGCCACATTT	-48299692	True	NA	-17	True	AATAAA	-19	NA	48301388	48293994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301278
WTC11_00064013	chr3	-	1091	2	FSM	ENSG00000172113.10	ENST00000484959.1	1091	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAAGATCTAAGCAGTC	-48299700	True	NA	NA	False	GATAAA	-42	NA	48301396	48297476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48298524_48301352
WTC11_00064018	chr3	-	7310	38	FSM	ENSG00000164050.13	ENST00000358536.8	7308	38	0	-2	0	0	multi-exon	FALSE	canonical	3	61	junction_37	85.2414179996193	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-48429453	False	3036	-7	True	ATTAAA	-16	NA	48429463	48403853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
WTC11_00064019	chr3	-	7178	38	FSM	ENSG00000164050.13	ENST00000296440.11	7178	38	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_37	84.2259041022461	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-48425134	False	4952	-7	True	ATTAAA	-16	NA	48430086	48403853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48430007
WTC11_00064020	chr3	-	5859	37	FSM	ENSG00000164050.13	ENST00000456774.5	5859	37	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_28	88.1472183268731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGGAGCCACGGCCT	-48424525	False	NA	NA	False	AAAACA	-18	NA	48424611	48404485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48419675_48420223_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504
WTC11_00064031	chr3	-	1686	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	-38	-187	0	187	multi-exon	TRUE	canonical	3	120	junction_3	75.6615269913757	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGGAGTTCCAGTGAG	-48435167	True	NA	NA	False	NA	NA	NA	48440119	48431976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
WTC11_00064033	chr3	-	2019	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	62	0	12	0	multi-exon	FALSE	canonical	1	2	junction_5	550.468382379951	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	-48504670	False	NA	-36	True	AATAAA	-21	NA	48504764	48467869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
WTC11_00064034	chr3	-	671	3	FSM	ENSG00000164054.17	ENST00000466424.5	673	3	2	0	2	0	multi-exon	FALSE	canonical	3	99	junction_1	685.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48469791	False	NA	-42	True	AATAAA	-15	NA	48469843	48467875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48468218_48469360_48469574_48469727
WTC11_00064036	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_3	202.407180373293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461864	True	NA	-42	True	AATAAA	-15	NA	48473208	48467875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
WTC11_00064038	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_4	420.79477183064	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48499896	True	NA	-42	True	AATAAA	-15	NA	48504174	48467875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
WTC11_00064039	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	549.052492936695	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-48504701	True	NA	-43	True	AATAAA	-14	NA	48504795	48467876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
WTC11_00064048	chr3	-	576	8	FSM	ENSG00000114268.12	ENST00000468162.5	576	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	34.3968437090216	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGATGTGGGCCAGAG	-48549865	False	NA	NA	False	NA	NA	NA	48549895	48536444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48536464_48536744_48536821_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863
WTC11_00064052	chr3	-	603	10	FSM	ENSG00000114270.18	ENST00000459756.5	818	10	203	12	203	-12	multi-exon	FALSE	canonical	3	12	junction_9	6.9513299198298	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGGCACGCTCAG	NA	False	NA	NA	False	NA	NA	NA	48570238	48567709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48567764_48567837_48567892_48568089_48568171_48568498_48568535_48568783_48568856_48569374_48569447_48569591_48569649_48569724_48569761_48569879_48569916_48570133
WTC11_00064054	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_12	226.916452442058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	-48589158	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
WTC11_00064055	chr3	-	1147	4	FSM	ENSG00000010256.11	ENST00000480561.5	1014	4	-133	0	-133	0	multi-exon	FALSE	canonical	3	3465	junction_2	148.728686614998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGACCACCAATAAAATC	-48600947	False	NA	-46	True	NA	NA	NA	48600974	48599033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48599711_48600062_48600152_48600481_48600568_48600679
WTC11_00064060	chr3	-	2617	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	-6	0	6	multi-exon	FALSE	canonical	1	69	junction_5	55.8269424203046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGTGGCTTGGTGG	-48632443	True	NA	1	True	AATAAA	-22	NA	48635461	48625716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
WTC11_00064061	chr3	-	2636	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	-6	0	6	multi-exon	FALSE	canonical	1	69	junction_5	53.7580459094264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGTGGCTTGGTGG	-48632465	True	NA	1	True	AATAAA	-22	NA	48635483	48625716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
WTC11_00064062	chr3	-	2737	20	FSM	ENSG00000225697.13	ENST00000358747.10	2729	20	0	-8	0	6	multi-exon	FALSE	canonical	1	69	junction_5	54.8879997884385	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGTGGCTTGGTGG	-48630828	False	NA	1	True	AATAAA	-22	NA	48633846	48625716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476
WTC11_00064063	chr3	-	5690	12	FSM	ENSG00000225697.13	ENST00000489483.5	5682	12	0	-8	0	6	multi-exon	FALSE	canonical	3	4	junction_4	77.5160873732214	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGTGGCTTGGTGG	-48631309	False	NA	1	True	AATAAA	-22	NA	48634327	48625716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48628542_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48633085_48633250_48633391_48633476
WTC11_00064074	chr3	-	3835	8	FSM	ENSG00000008300.17	ENST00000461362.5	3633	8	-64	-138	-64	2	multi-exon	FALSE	canonical	3	54	junction_7	9.07789420875272	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTTTTCCTGTTGGG	NA	False	NA	0	True	AATAAA	-18	NA	48643994	48636460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553
WTC11_00064078	chr3	-	2936	13	FSM	ENSG00000213672.8	ENST00000416649.6	2925	13	0	-11	0	11	multi-exon	FALSE	canonical	3	60	junction_10	45.149981543001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATCTTGGGAGACAGT	-48680461	True	NA	6	True	AATAAA	-29	NA	48685884	48673832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682136_48682347_48682553_48682902_48683013_48685636
WTC11_00064085	chr3	-	1724	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	324	junction_5	43.6394317103236	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702834	True	NA	-2	True	AATACA	-20	NA	48717202	48688002	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
WTC11_00064086	chr3	-	1838	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	-92	0	92	multi-exon	FALSE	canonical	3	386	junction_5	22.5973449767888	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCCACCCCCACTCCA	-48702853	True	NA	90	True	NA	NA	NA	48717221	48687910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
WTC11_00064087	chr3	-	1179	4	FSM	ENSG00000068745.15	ENST00000479914.5	1077	4	-102	0	-102	0	multi-exon	FALSE	canonical	3	398	junction_1	20.9814733091416	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGGATGCTAGGGCT	NA	False	NA	NA	False	NA	NA	NA	48695690	48689537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48689714_48691306_48691483_48692953_48693180_48695089
WTC11_00064088	chr3	-	662	3	FSM	ENSG00000068745.15	ENST00000491686.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCCAACCAGATCCGAAA	-48693062	False	NA	NA	False	NA	NA	NA	48693335	48689609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48689714_48691306_48691483_48692953
WTC11_00064091	chr3	-	1294	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	-109	0	109	multi-exon	FALSE	canonical	3	202	junction_1	92	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGATATTTGTTAAG	-48702848	True	NA	NA	False	NA	NA	NA	48717216	48693338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48695089_48695422_48717156
WTC11_00064092	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	101.6267681273	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	-48717261	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
WTC11_00064094	chr3	-	1403	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	230	junction_1	47	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	-48702824	True	NA	-40	True	TATAAA	-34	NA	48717192	48693487	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694526_48695089_48695419_48717156
WTC11_00064095	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	108.894444302728	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	-48702835	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
WTC11_00064096	chr3	-	2174	3	FSM	ENSG00000068745.15	ENST00000431721.6	2174	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAATGTTTTCAGTCTTT	-48702848	True	NA	-73	True	ATTAAA	-20	NA	48717216	48693520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48695422_48715314_48715528_48717156
WTC11_00064097	chr3	-	1163	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	10	-8	combination_of_known_junctions	FALSE	canonical	3	140	junction_1	75.1236018542479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGAAGAATTACATAAAAA	-48702810	True	NA	-48	True	ATTAAA	-45	NA	48717178	48693495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
WTC11_00064098	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	-48702824	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48695422_48717156
WTC11_00064106	chr3	-	2785	12	FSM	ENSG00000114302.16	ENST00000454963.5	1849	12	0	-936	0	7	multi-exon	FALSE	canonical	3	14	junction_1	19.539322505321	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTGCAGTCTTATG	-48842362	True	NA	-1	True	AATAAA	-21	NA	48847804	48746578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48747941_48751584_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
WTC11_00064109	chr3	-	1777	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_5	3.99804639792987	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTATATTTTCT	-48898381	True	NA	-3	True	AATAAA	-24	NA	48898882	48856926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
WTC11_00064110	chr3	-	1052	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	-12	2	-12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGCTGGCTGGTCG	NA	False	NA	NA	False	AATAAA	-33	NA	48918835	48917783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48917800_48918800
WTC11_00064112	chr3	-	1105	6	FSM	ENSG00000178149.17	ENST00000498498.5	1102	6	0	-3	0	0	multi-exon	TRUE	canonical	3	162	junction_4	27.4036493920062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49017308	False	NA	-4	True	AATAAA	-21	NA	49017356	49015487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227
WTC11_00064113	chr3	-	1706	12	FSM	ENSG00000178149.17	ENST00000441576.6	1706	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	48.4839583251619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016720	True	NA	-4	True	AATAAA	-21	NA	49018564	49015487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016061_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
WTC11_00064114	chr3	-	1886	10	FSM	ENSG00000178149.17	ENST00000460505.5	1886	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	20.6128331116537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016722	True	NA	-4	True	AATAAA	-21	NA	49018566	49015487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
WTC11_00064116	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	34.2593414901519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016736	True	NA	-4	True	AATAAA	-21	NA	49018580	49015487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
WTC11_00064123	chr3	-	2305	11	FSM	ENSG00000178035.13	ENST00000677519.1	2295	11	0	-10	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	279.315162495701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	-48985514	True	NA	24	True	AATAAA	-10	NA	49029396	49024332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028807_49029252
WTC11_00064124	chr3	-	2088	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	-10	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	268.83772470065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	-48985515	True	NA	24	True	AATAAA	-10	NA	49029397	49024332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
WTC11_00064127	chr3	-	3257	10	FSM	ENSG00000198218.11	ENST00000395443.7	3257	10	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_9	41.3413970628849	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTGAACAACGTCTCT	-49085818	True	NA	-8	True	NA	NA	NA	49094071	49029706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
WTC11_00064128	chr3	-	2362	2	FSM	ENSG00000198218.11	ENST00000498392.1	2362	2	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCCTTTATGACAAGTG	NA	False	NA	-63	True	ATTAAA	-16	NA	49033830	49029930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182
WTC11_00064130	chr3	-	2920	11	FSM	ENSG00000198218.11	ENST00000424300.5	3009	11	89	0	89	0	multi-exon	FALSE	canonical	3	12	junction_10	148.768948372972	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGCTGGCTGACTCT	-49093507	False	NA	-1	True	NA	NA	NA	49093522	49030211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093254
WTC11_00064140	chr3	-	2399	24	FSM	ENSG00000172053.18	ENST00000430182.5	2399	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	199.36867275191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-49090347	True	NA	-4	True	AATAAA	-21	NA	49104757	49095932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372_49104472_49104616
WTC11_00064141	chr3	-	2349	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	13	0	-8	0	multi-exon	FALSE	canonical	3	726	junction_11	87.6464653740354	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-49104481	False	NA	-10	True	AATAAA	-15	NA	49104519	49095938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
WTC11_00064143	chr3	-	1317	6	FSM	ENSG00000172053.18	ENST00000459870.6	1317	6	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_4	45.1902644382615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCTCCTAGAGTCT	-49099545	False	NA	-19	True	AATAAA	-6	NA	49099583	49095947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098481_49098599_49098990_49099109_49099254_49099343_49099432_49099509
WTC11_00064144	chr3	-	2289	23	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	178.685512554024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCTCCTAGAGTCT	-49104701	False	NA	-19	True	AATAAA	-6	NA	49104739	49095947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
WTC11_00064160	chr3	-	4890	27	FSM	ENSG00000172046.20	ENST00000417901.6	4721	27	-102	-67	13	63	multi-exon	FALSE	canonical	3	156	junction_17	57.6146143524562	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTGTGTTTATATA	-49116579	True	NA	45	True	NA	NA	NA	49120925	49107982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00064161	chr3	-	3907	24	ISM	ENSG00000172046.20	ENST00000398896.6	4366	26	2834	0	-267	0	3prime_fragment	FALSE	canonical	3	34	junction_21	87.417473909977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49113632	False	NA	-18	True	AATAAA	-20	NA	49117978	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117786_49117946
WTC11_00064162	chr3	-	3836	22	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	425	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	78.6625733974852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-49112940	False	NA	-22	True	AATAAA	-16	NA	49117286	49108049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058
WTC11_00064164	chr3	-	4992	27	NNC	ENSG00000172046.20	novel	4677	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_9	122.885193209187	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-49116485	True	NA	-3	True	AATAAA	-19	NA	49120831	49108674	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112394_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117359_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120467
WTC11_00064165	chr3	-	4559	26	FSM	ENSG00000172046.20	ENST00000398888.6	4559	26	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_21	92.5560068282983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-49116592	True	NA	-3	True	AATAAA	-19	NA	49120938	49108674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00064171	chr3	-	5693	32	FSM	ENSG00000172037.14	ENST00000305544.9	5692	32	0	-1	0	1	multi-exon	FALSE	canonical	3	106	junction_26	33.0651298133451	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTGGACTCTGAT	-49129078	True	NA	0	True	AATAAA	-18	NA	49133050	49121112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791
WTC11_00064184	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	50.3283549369299	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-49337036	True	NA	NA	False	NA	NA	NA	49340053	49277143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
WTC11_00064185	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	52.3656375880214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	-49337016	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
WTC11_00064188	chr3	-	921	3	NNC	ENSG00000233276.8	novel	899	2	NA	NA	0	74167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	944.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGGCACAGTGGCTCA	-49355743	True	NA	NA	False	NA	NA	NA	49358353	49283008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283034_49357178_49357748_49358026
WTC11_00064189	chr3	-	1831	6	NNC	ENSG00000067560.14	novel	1805	5	NA	NA	0	76130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1154.12865833927	2162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGGCACAGTGGCTCA	-49349833	True	NA	NA	False	NA	NA	NA	49411976	49283008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283035_49359144_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
WTC11_00064194	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1022.40901184409	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49349833	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
WTC11_00064198	chr3	-	1705	7	ISM	ENSG00000145020.16	ENST00000638063.1	1783	8	288	-121	0	1	3prime_fragment	FALSE	canonical	3	26	junction_6	173.578672525041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49420435	False	NA	-5	True	ATTAAA	-20	NA	49422172	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103
WTC11_00064199	chr3	-	2093	9	FSM	ENSG00000145020.16	ENST00000636871.1	2076	9	0	-17	0	1	multi-exon	TRUE	canonical	3	70	junction_1	160.540444670494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418626	True	NA	-5	True	ATTAAA	-20	NA	49422393	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
WTC11_00064201	chr3	-	1826	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	-3	0	1	multi-exon	FALSE	canonical	2	8	junction_1	181.740339551813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418690	True	NA	-5	True	ATTAAA	-20	NA	49422457	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
WTC11_00064204	chr3	-	2876	7	FSM	ENSG00000145020.16	ENST00000637268.1	2855	7	0	-21	0	1	multi-exon	FALSE	canonical	2	23	junction_2	259.989369440795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418702	True	NA	-5	True	ATTAAA	-20	NA	49422469	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49420343_49421491_49421573_49422103_49422258_49422360
WTC11_00064205	chr3	-	3977	5	FSM	ENSG00000145020.16	ENST00000465925.6	3976	5	0	-1	0	1	multi-exon	FALSE	canonical	3	397	junction_4	68.4703402941741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418702	True	NA	-5	True	ATTAAA	-20	NA	49422469	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49421573_49422103_49422272_49422360
WTC11_00064208	chr3	-	2420	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	-17	0	1	multi-exon	FALSE	canonical	3	354	junction_3	84.732231296055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418706	True	NA	-5	True	ATTAAA	-20	NA	49422473	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
WTC11_00064211	chr3	-	2040	9	FSM	ENSG00000145020.16	ENST00000538581.6	2038	9	0	-2	0	1	multi-exon	FALSE	canonical	3	114	junction_8	147.080707011491	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49418762	True	NA	-5	True	ATTAAA	-20	NA	49422529	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
WTC11_00064213	chr3	-	3257	8	FSM	ENSG00000283189.2	ENST00000636204.1	3240	8	0	-17	0	0	multi-exon	FALSE	canonical	3	354	junction_3	79.74730498933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49421906	False	NA	-5	True	ATTAAA	-20	NA	49423643	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103
WTC11_00064214	chr3	-	4196	6	FSM	ENSG00000283189.2	ENST00000637442.1	4178	6	0	-18	0	0	multi-exon	FALSE	canonical	3	354	junction_3	87.4368343434276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGCTTCATTGTTCTC	-49422119	False	NA	-5	True	ATTAAA	-20	NA	49423856	49416776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49420343_49421491_49421573_49422103
WTC11_00064215	chr3	-	1288	3	FSM	ENSG00000145020.16	ENST00000635798.1	1276	3	0	-12	0	0	multi-exon	FALSE	canonical	2	11	junction_1	231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49418217	False	NA	-50	True	NA	NA	NA	49419954	49416821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49419259_49419406_49419709
WTC11_00064221	chr3	-	2470	7	FSM	ENSG00000145020.16	ENST00000637994.1	2468	7	0	-2	0	0	multi-exon	FALSE	canonical	3	397	junction_6	68.3042621087603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49418693	True	NA	-50	True	NA	NA	NA	49422460	49416821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
WTC11_00064231	chr3	-	5083	12	FSM	ENSG00000283189.2	ENST00000636461.1	5083	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	248.099353598913	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGGAGAGGATAAAACC	-49427501	False	NA	NA	False	NA	NA	NA	49429238	49417202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
WTC11_00064238	chr3	-	3224	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	3	0	3	0	multi-exon	FALSE	canonical	3	21	junction_2	4.31740662898458	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-49427584	True	NA	NA	False	NA	NA	NA	49429321	49422332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
WTC11_00064240	chr3	-	6124	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	-16	0	16	multi-exon	FALSE	canonical	3	21	junction_9	67.2283743741261	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTCCTCCGTGTGTTCA	-49721358	True	NA	1	True	AATAAA	-39	NA	49723951	49716827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
WTC11_00064242	chr3	-	2919	8	FSM	ENSG00000173540.14	ENST00000678208.1	2919	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	20.5277313676412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCACACAGCCTGTTTT	-49721350	True	NA	NA	False	NA	NA	NA	49723943	49720349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49723115_49723253_49723303_49723391_49723473_49723597
WTC11_00064243	chr3	-	1503	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	8	1633	0	-19	multi-exon	FALSE	canonical	3	194	junction_2	19.5176202442818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGCCAGGGCCAGGGCT	-49721350	True	NA	-60	True	NA	NA	NA	49723943	49721548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
WTC11_00064245	chr3	-	4118	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	-1	0	0	multi-exon	FALSE	canonical	3	28	junction_4	54.6214243680994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-49781562	True	NA	-1	True	AATAAA	-16	NA	49786540	49724293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
WTC11_00064246	chr3	-	1815	6	FSM	ENSG00000176095.12	ENST00000468463.5	1815	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	53.7289493662402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGCTCTGACTGGT	-49781562	True	NA	1	True	TATAAA	-44	NA	49786540	49726912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49727621_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
WTC11_00064248	chr3	-	1069	2	FSM	ENSG00000183763.9	ENST00000491060.1	1046	2	0	-23	0	3	multi-exon	FALSE	canonical	3	168	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTTCTGAGAG	NA	False	NA	-4	True	AATAAA	-22	NA	49829774	49828597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49829509_49829616
WTC11_00064249	chr3	-	2026	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	-3	0	3	multi-exon	TRUE	canonical	3	106	junction_11	24.1564838974076	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTTCTGAGAG	-49854279	True	NA	-4	True	AATAAA	-22	NA	49856564	49828597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
WTC11_00064250	chr3	-	511	3	FSM	ENSG00000183763.9	ENST00000475495.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	10.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATAGTCGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	49840552	49831915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49832069_49839771_49839861_49840283
WTC11_00064251	chr3	-	326	3	FSM	ENSG00000183763.9	ENST00000488860.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGCTCAGGAGCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	49844587	49842485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49842548_49843800_49844018_49844540
WTC11_00064255	chr3	-	3774	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	3	-779	0	778	multi-exon	FALSE	canonical	0	0	junction_5	112.964109344517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCATCTGGGCCTCCA	-49862030	True	NA	-4	True	AATAAA	-24	NA	49869903	49857209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
WTC11_00064256	chr3	-	3157	10	FSM	ENSG00000164076.17	ENST00000475665.5	3157	10	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	35.9258495608199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCCTCTCGCCTTT	-49862030	True	NA	-14	True	AATAAA	-19	NA	49869903	49857987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
WTC11_00064266	chr3	-	454	4	FSM	ENSG00000164078.14	ENST00000463789.1	558	4	104	0	104	0	multi-exon	FALSE	canonical	3	10	junction_2	1.88561808316413	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCATCGCCACGCTCGCC	NA	False	NA	NA	False	NA	NA	NA	49891838	49890569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49890651_49891196_49891307_49891398_49891581_49891757
WTC11_00064267	chr3	-	341	2	FSM	ENSG00000164078.14	ENST00000490053.1	341	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACTAAGTCGTAAGTG	-49895262	False	NA	NA	False	AATACA	-36	NA	49895439	49891770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49891839_49895166
WTC11_00064269	chr3	-	2085	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-47	-13	-24	13	multi-exon	FALSE	canonical	3	64	junction_5	4.40908153700972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCACTTGTCCCTTCG	-49929225	True	NA	6	True	ATTAAA	-27	NA	49929858	49908859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
WTC11_00064270	chr3	-	1599	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	31	-13	-24	13	multi-exon	FALSE	canonical	3	12	junction_3	24.0572234474388	3168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCACTTGTCCCTTCG	-49929225	True	NA	6	True	ATTAAA	-27	NA	49929858	49908859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
WTC11_00064271	chr3	-	2415	3	FSM	ENSG00000164077.15	ENST00000486107.5	2431	3	31	-15	-24	13	multi-exon	FALSE	canonical	3	12	junction_1	26	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCACTTGTCCCTTCG	-49929225	True	NA	6	True	ATTAAA	-27	NA	49929858	49908859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49910885_49913219_49913360_49929608
WTC11_00064283	chr3	-	1113	4	FSM	ENSG00000214706.12_ENSG00000186792.17	ENST00000415204.5	959	4	1	-155	1	5	multi-exon	FALSE	canonical	2	5	junction_3	14.0079342596338	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTGTTGCTCCTGTT	-50298303	True	NA	2	True	CATAAA	-24	NA	50299400	50292825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50293631_50293722_50294708_50294854_50299212
WTC11_00064286	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298308	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50297673_50299212
WTC11_00064287	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298319	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50297528_50299212
WTC11_00064289	chr3	-	2511	3	FSM	ENSG00000114378.17	ENST00000266031.8	2517	3	3	3	3	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-50303471	False	NA	-22	True	AATAAA	-15	NA	50303569	50299892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50300801_50300987_50301078_50302056
WTC11_00064290	chr3	-	2334	5	FSM	ENSG00000068001.14	ENST00000442581.1	2318	5	0	-16	0	-6	multi-exon	FALSE	canonical	2	14	junction_4	266.863612169213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGGCTAAAGT	-50311749	False	11028	-12	True	ATTAAA	-28	NA	50322777	50317795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365_50321774_50322652
WTC11_00064291	chr3	-	4053	3	FSM	ENSG00000068001.14	ENST00000447092.5	4054	3	0	1	0	-1	multi-exon	FALSE	canonical	3	642	junction_1	24	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGGCTAAAGTGTATG	-50311754	False	11028	-7	True	ATTAAA	-33	NA	50322782	50317790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50318540_50318955_50319046_50319568
WTC11_00064292	chr3	-	1971	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	-77	-12	-40	-6	multi-exon	FALSE	canonical	3	112	junction_3	261.892259441847	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGGCTAAAGT	-50311794	False	11028	-12	True	ATTAAA	-28	NA	50322822	50317795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
WTC11_00064294	chr3	-	2367	4	NIC	ENSG00000068001.14	novel	2136	4	NA	NA	-245	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	308.920701799022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTGCTTGGATTTTG	-50310434	False	11028	-27	True	ATTAAA	-13	NA	50321462	50317810	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_50318540_50318955_50319046_50319568_50320536_50320881
WTC11_00064298	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_2	12	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-50317195	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327953
WTC11_00064299	chr3	-	735	4	FSM	ENSG00000114383.10	ENST00000454201.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	368.040154814058	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	-50317178	True	NA	-47	True	AATAAA	-2	NA	50328206	50326007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327037_50327220_50327953
WTC11_00064300	chr3	-	790	4	FSM	ENSG00000114383.10	ENST00000421918.1	790	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	367.212018684937	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	-50317223	True	NA	-47	True	AATAAA	-2	NA	50328251	50326007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327027_50327220_50327953
WTC11_00064303	chr3	-	1753	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	4	0	0	multi-exon	FALSE	canonical	3	94	junction_1	15.039531242695	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	-50336265	True	NA	-10	True	AATAAA	-16	NA	50337464	50329785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
WTC11_00064304	chr3	-	1849	6	FSM	ENSG00000068028.18	ENST00000359365.9	1847	6	0	-2	0	0	multi-exon	FALSE	canonical	2	8	junction_4	52.1359760626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	-50339036	False	NA	-10	True	AATAAA	-16	NA	50340836	50329785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338012_50340555
WTC11_00064305	chr3	-	2033	2	FSM	ENSG00000068028.18	ENST00000478619.1	2060	2	27	0	-17	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCAGGCCTAGGCACC	-50339153	False	NA	NA	False	NA	NA	NA	50340953	50336376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50338012_50340555
WTC11_00064313	chr3	-	1916	10	FSM	ENSG00000114388.14	ENST00000479512.5	1905	10	0	-11	0	0	multi-exon	FALSE	canonical	2	5	junction_9	92.2088343696116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGAGTGCTGTTTCT	-50347992	False	2774	-1	True	AATAAA	-20	NA	50350766	50347487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349932
WTC11_00064323	chr3	-	5307	38	FSM	ENSG00000007402.12	ENST00000429770.5	5304	38	0	-3	0	0	multi-exon	FALSE	canonical	3	14	junction_9	8.35576722227827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCATCCACTGTATC	-50503406	False	NA	0	True	ATTAAA	-25	NA	50503428	50362798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50364807_50364887_50364971_50365074_50365185_50365355_50365483_50365632_50365689_50365809_50365863_50366010_50366164_50366266_50366339_50366577_50366629_50366830_50366920_50367010_50367110_50367393_50367498_50367641_50367705_50367811_50367903_50368137_50368236_50370319_50370381_50374736_50374814_50375643_50375706_50375808_50375881_50375962_50376035_50376113_50376189_50377466_50377542_50377731_50377804_50378007_50378098_50378283_50378334_50378914_50378994_50379091_50379200_50379431_50379591_50379724_50379825_50379967_50380019_50380747_50380806_50380994_50381127_50384195_50384338_50387567_50387613_50394108_50394169_50434312_50434430_50476117_50476200_50503217
WTC11_00064326	chr3	-	1699	4	NNC	ENSG00000007402.12	novel	1030	4	NA	NA	2	885	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	22.196095752782	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGAGTGATCACTGT	-50503399	False	NA	-5	True	AATAAA	-13	NA	50503421	50414917	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_50416214_50434312_50434430_50476117_50476200_50503217
WTC11_00064328	chr3	-	2032	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	-13	0	13	multi-exon	FALSE	canonical	2	3	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCGATTTTCAGTTGTG	-50611554	True	NA	-22	True	AATAAA	-31	NA	50611774	50606475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50608143_50608372_50608594_50611630
WTC11_00064329	chr3	-	5946	25	FSM	ENSG00000145041.16	ENST00000423656.5	5946	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	59.8894670529709	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGCTGTTTTGTTA	-51494567	True	NA	0	True	AATAAA	-20	NA	51499994	51395866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51397125_51398734_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51499872
WTC11_00064330	chr3	-	5649	25	FSM	ENSG00000145041.16	ENST00000684031.1	5649	25	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_23	54.5096831357104	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	-51494588	True	NA	-5	True	AATAAA	-20	NA	51500015	51397841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51496733_51496781_51499872
WTC11_00064332	chr3	-	2054	1	FSM	ENSG00000280422.1	ENST00000624646.1	2054	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTGTATGTGTGTATG	-51953892	False	NA	-3	True	AATAAA	-19	NA	51953902	51951848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51951800_51953900
WTC11_00064335	chr3	-	2015	13	FSM	ENSG00000090097.22	ENST00000355852.6	2015	13	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_12	21.4566746931786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51966482	False	975	-10	True	AATAAA	-20	NA	51967457	51957453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
WTC11_00064336	chr3	-	2160	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	-4	0	0	multi-exon	FALSE	canonical	3	33	junction_13	49.6473957557236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51966479	False	975	-10	True	AATAAA	-20	NA	51967454	51957453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
WTC11_00064337	chr3	-	2013	14	FSM	ENSG00000090097.22	ENST00000484633.5	2009	14	0	-4	0	0	multi-exon	FALSE	canonical	2	11	junction_6	70.0887856209714	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51967435	False	975	-10	True	AATAAA	-20	NA	51968410	51957453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809_51962893_51967325_51967435_51968343
WTC11_00064338	chr3	-	1784	13	FSM	ENSG00000090097.22	ENST00000471622.5	1784	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	53.4483135582613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	-51962068	False	NA	-51	True	NA	NA	NA	51962079	51957494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940
WTC11_00064343	chr3	-	1660	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	-3	0	-1	multi-exon	FALSE	canonical	3	32	junction_3	7.78888096369861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGCTCCTGCTTCTAAA	-51973074	True	NA	-1	True	AATAAA	-18	NA	51974049	51968511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
WTC11_00064345	chr3	-	857	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	-24	77	0	29	multi-exon	FALSE	canonical	2	52	junction_3	3844.51265514311	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTGGTTGCTCCATC	-51844056	True	NA	-1	True	AATAAA	-42	NA	51995881	51993598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
WTC11_00064347	chr3	-	671	4	FSM	ENSG00000162244.12	ENST00000479017.5	670	4	0	-1	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3863.34020706895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844005	False	NA	-30	True	AATAAA	-13	NA	51995830	51993627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995768
WTC11_00064348	chr3	-	714	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	-1	0	0	multi-exon	FALSE	canonical	3	173	junction_3	3787.56104461257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844019	True	NA	-30	True	AATAAA	-13	NA	51995844	51993627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
WTC11_00064349	chr3	-	742	4	FSM	ENSG00000162244.12	ENST00000466397.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_3	3834.62830300698	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844038	True	NA	-30	True	AATAAA	-13	NA	51995863	51993627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995730
WTC11_00064350	chr3	-	880	3	FSM	ENSG00000162244.12	ENST00000481629.1	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	4442	junction_2	1746.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGGTGGTACACTTT	-51844056	True	NA	NA	False	NA	NA	NA	51995881	51994296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51995107_51995424_51995470_51995856
WTC11_00064351	chr3	-	3361	3	FSM	ENSG00000164086.10	ENST00000495880.2	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGTGTCCGATAAGGG	-52056307	False	NA	-2	True	AATAAA	-20	NA	52056571	52048918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52051123_52053939_52054375_52055849
WTC11_00064352	chr3	-	2573	1	NIC	ENSG00000164086.10	novel	3361	3	NA	NA	4666	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAATGAGTCGTGTCC	-52051235	False	NA	-10	True	AATAAA	-12	NA	52051499	52048926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52048900_52051500
WTC11_00064355	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	45.8728785629845	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	-52154463	False	NA	-52	True	NA	NA	NA	52154690	52075285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
WTC11_00064356	chr3	-	2255	10	NIC	ENSG00000164087.8	novel	1760	11	NA	NA	-140	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	82.8735463906187	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	NA	False	NA	-52	True	NA	NA	NA	52154830	52075285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
WTC11_00064357	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	65.158575797818	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	-52152543	True	NA	NA	False	NA	NA	NA	52154404	52075453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
WTC11_00064364	chr3	-	4159	8	NIC	ENSG00000164091.12	novel	4286	9	NA	NA	12	-17	combination_of_known_splicesites	FALSE	canonical	3	4	junction_7	41.9027055772521	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTCTTAAACAGAATTT	-52273979	True	NA	-39	True	TATAAA	-15	NA	52278637	52254450	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52278200
WTC11_00064366	chr3	-	3605	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	-5	0	5	multi-exon	TRUE	canonical	3	221	junction_9	39.4966375151101	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGGTTGCTGGCCT	-52406407	True	NA	21	True	AATAAA	-31	NA	52410008	52401002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
WTC11_00064367	chr3	-	4266	4	FSM	ENSG00000163930.10	ENST00000466093.1	1127	4	-2141	-998	-39	0	multi-exon	FALSE	canonical	3	339	junction_1	14.290634073484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	-52405672	False	NA	-2	True	AATAAA	-8	NA	52405692	52401025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52403299_52403415
WTC11_00064368	chr3	-	3457	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	-23	0	5	multi-exon	TRUE	canonical	3	28	junction_9	72.9777095677166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGGTTGCTGGCCT	-52409894	False	NA	21	True	AATAAA	-31	NA	52409914	52401002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
WTC11_00064373	chr3	-	1882	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	13	-18	13	16	multi-exon	FALSE	canonical	3	1764	junction_13	151.739421611544	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCCTCGTCACTTGA	-52513666	True	NA	-5	True	AATAAA	-35	NA	52533844	52524368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
WTC11_00064381	chr3	-	7462	28	FSM	ENSG00000163939.18	ENST00000337303.8	4825	28	1	-2638	0	0	multi-exon	FALSE	canonical	3	75	junction_3	38.0281824595878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTTCTGTTAAAGT	-52674132	False	NA	1	True	AATAAA	-35	NA	52679713	52545351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573
WTC11_00064382	chr3	-	4870	29	FSM	ENSG00000163939.18	ENST00000409767.5	4849	29	0	-21	0	0	multi-exon	FALSE	canonical	2	10	junction_15	66.3706736935117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGGAAGGAACAAAGGAG	-52674133	False	NA	NA	False	CATAAA	-38	NA	52679714	52547989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52624896_52624942_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573
WTC11_00064388	chr3	-	1927	5	FSM	ENSG00000163939.18	ENST00000462207.1	1921	5	0	-6	0	6	multi-exon	FALSE	canonical	3	179	junction_1	16.931848688197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTAATTGTCTAGGAT	-52609450	False	NA	NA	False	AATAAA	-18	NA	52609461	52585466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312
WTC11_00064396	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	51.667741924295	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-52702692	True	NA	-7	True	AATAAA	-20	NA	52705791	52694485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
WTC11_00064398	chr3	-	2068	10	ISM	ENSG00000016864.19	ENST00000478968.6	1826	11	64	444	37	-34	intron_retention	FALSE	canonical	3	136	junction_9	41.6958416377046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTGGGAAAAATGGT	-52705375	False	NA	NA	False	NA	NA	NA	52705727	52694932	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723
WTC11_00064404	chr3	-	6053	16	FSM	ENSG00000114904.13	ENST00000233027.10	6053	16	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_9	26.6699997916927	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTACTCTTCTATGT	-52769238	True	NA	0	True	AATAAA	-20	NA	52770940	52708443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
WTC11_00064405	chr3	-	3567	15	NIC	ENSG00000114904.13	novel	6053	16	NA	NA	11	997	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	28.8536065725742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGTTTTTTTTTTGA	-52769226	True	NA	0	True	AATAAA	-19	NA	52770928	52710779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
WTC11_00064406	chr3	-	2567	14	FSM	ENSG00000114904.13	ENST00000383721.8	2576	14	0	9	0	-9	multi-exon	FALSE	canonical	3	63	junction_7	29.9425485391232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATTCACTCATCTAAAG	-52769237	True	NA	NA	False	TATAAA	-9	NA	52770939	52737506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
WTC11_00064409	chr3	-	326	2	FSM	ENSG00000055955.17	ENST00000485894.1	402	2	76	0	-35	0	multi-exon	FALSE	canonical	2	7	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCATCAGCACCTCC	NA	False	NA	NA	False	NA	NA	NA	52823741	52820990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52821131_52823555
WTC11_00064410	chr3	-	523	3	FSM	ENSG00000272573.6	ENST00000446157.3	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	-52835008	False	NA	-4	True	AATAAA	-26	NA	52835019	52833120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52833431_52833616_52833750_52834939
WTC11_00064412	chr3	-	4724	9	NNC	ENSG00000213533.13	novel	4744	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.4721658778222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	-52893071	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52837987_52838006_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
WTC11_00064413	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	26.10340504804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	-52893071	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
WTC11_00064415	chr3	-	835	5	NIC	ENSG00000213533.13	novel	458	4	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	87.4199633950964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGAGGTTGTTCATT	-52893085	True	NA	NA	False	ATTAAA	-18	NA	52897562	52847255	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52847552_52849791_52849914_52852602_52852699_52855395_52855445_52897290
WTC11_00064416	chr3	-	5627	21	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	-110	931	combination_of_known_junctions	TRUE	canonical	3	20	junction_20	17.8185296812055	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAGATAACAATGATGTT	-53046848	False	NA	NA	False	NA	NA	NA	53046860	52902640	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
WTC11_00064418	chr3	-	4627	22	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	23.3678073804263	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAACTGATTGTGATT	-53044910	True	NA	-8	True	AATATA	-17	NA	53046030	52903573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53043135_53043255_53045815
WTC11_00064422	chr3	-	1830	12	NIC	ENSG00000163933.10	novel	5081	13	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	34	junction_11	88.4449681818825	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATTTTCTCTTTTACT	-53127948	True	NA	-5	True	TTTAAA	-30	NA	53130435	53091647	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53130337
WTC11_00064425	chr3	-	2843	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	-12	0	10	multi-exon	FALSE	canonical	3	118	junction_1	1240.54997061458	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCACTTAGCTACC	-53153063	True	NA	-9	True	AATAAA	-25	NA	53256000	53224701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
WTC11_00064427	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	1666.39069364827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
WTC11_00064428	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	1314.32275628641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
WTC11_00064429	chr3	-	6853	6	FSM	ENSG00000163931.17	ENST00000460343.5	7286	6	433	0	-14	0	multi-exon	FALSE	canonical	3	4359	junction_3	472.429888978248	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGGCCCTGAAATGTT	-53234759	True	NA	-20	True	AATATA	-15	NA	53235174	53225651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356
WTC11_00064433	chr3	-	5923	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	3	0	-3	multi-exon	TRUE	canonical	3	187	junction_2	16.7729941672122	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTAAAATTTAATTGTGT	-53344772	True	NA	NA	False	AATAAA	-24	NA	53347543	53283431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
WTC11_00064435	chr3	-	7893	9	FSM	ENSG00000016391.11	ENST00000315251.11	7694	9	0	-199	0	199	multi-exon	TRUE	canonical	3	35	junction_6	5.94637494613315	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTATCTAAGTTTACC	-53845836	True	NA	NA	False	AGTAAA	-19	NA	53846419	53812135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53818196_53818937_53819041_53819531_53819675_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
WTC11_00064436	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	12.4730264526653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-53877224	True	NA	NA	False	ATTAAA	-1	NA	53882152	53867065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
WTC11_00064437	chr3	-	1202	8	FSM	ENSG00000113812.14	ENST00000486794.1	1202	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	43.7623451970168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTATTGTAATTTATT	-53872365	False	NA	-2	True	TATAAA	-15	NA	53877293	53868652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873147_53875947_53876081_53876619_53876714_53877213
WTC11_00064439	chr3	-	1497	5	FSM	ENSG00000113811.12	ENST00000495461.6	1497	5	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_4	89.3042552177666	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATAATTCCTCTTCTGGT	-53887037	True	NA	-5	True	AATAAA	-22	NA	53891859	53884416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53885562_53885825_53885913_53886850_53886935_53888392_53888484_53891769
WTC11_00064440	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	562.606601009977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	-53887043	True	NA	-30	True	ATTAAA	-13	NA	53891865	53885300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
WTC11_00064441	chr3	-	6277	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	3	5489	junction_1	898.559711736263	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	-54576379	True	NA	-11	True	ATTAAA	-19	NA	54639857	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690
WTC11_00064442	chr3	-	3383	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3444	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_2	3529.03041748013	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTGGTTTTTATTTTTC	-54576379	True	NA	-9	True	ATTAAA	-21	NA	54639857	54628677	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54631778_54633558_54633741_54634460_54634566_54637690
WTC11_00064443	chr3	-	4106	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17146	3443	at_least_one_novel_splicesite	FALSE	canonical	2	134	junction_1	3065.28989819886	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTGGTTTTTATTTTT	NA	False	NA	-10	True	ATTAAA	-20	NA	54657003	54628678	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632503_54633558_54633741_54634460_54634566_54637690_54639820_54656966
WTC11_00064444	chr3	-	4834	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17146	3442	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	3093.28450679856	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-11	True	ATTAAA	-19	NA	54657003	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54630202_54631643_54632503_54633558_54633741_54634460_54634566_54637690_54639820_54656966
WTC11_00064445	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	2827.76900675348	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
WTC11_00064446	chr3	-	678	3	FSM	ENSG00000114251.15	ENST00000482079.1	959	3	278	3	2	-3	multi-exon	FALSE	canonical	2	5	junction_1	3	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCCGCGTCTCGCCC	-55480890	False	NA	NA	False	NA	NA	NA	55480918	55474336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_55474630_55479313_55479565_55480784
WTC11_00064447	chr3	-	1342	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-66	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.5	4544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTTTGCCTTCATCCA	-56468522	False	NA	-15	True	AATAAA	-11	NA	56468533	56433790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_56434050_56434350_56435148_56468247
WTC11_00064450	chr3	-	5924	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	-445	121	-197	0	multi-exon	FALSE	canonical	3	31	junction_7	16.7214474640506	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTACTTGAATTATCTC	NA	False	NA	-11	True	AATAAA	-18	NA	56683462	56622858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
WTC11_00064452	chr3	-	3571	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	11	0	11	0	multi-exon	FALSE	canonical	2	4	junction_9	6.32065006814573	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-56801797	True	NA	-6	True	AATAAA	-17	NA	56801938	56727419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
WTC11_00064456	chr3	-	8703	13	FSM	ENSG00000144730.19	ENST00000296318.12	8698	13	0	-5	0	5	multi-exon	FALSE	canonical	3	67	junction_3	9.17840157955379	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGCTCATTTTTCAGCA	-57158294	True	NA	-19	True	AATAAA	-20	NA	57165353	57089976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57096506_57097595_57098539_57101178_57101364_57102478_57102590_57103090_57103146_57104341_57104408_57105856_57106009_57106109_57106155_57109536_57109658_57110192_57110312_57114691_57114818_57120255_57120314_57165160
WTC11_00064457	chr3	-	6575	14	NNC	ENSG00000144730.19	novel	8698	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8439522378715	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGTGGCTCATTTTT	-57158294	True	NA	-24	True	AATAAA	-15	NA	57165353	57089981	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_57090454_57092576_57096506_57097595_57098539_57101178_57101364_57102478_57102590_57103090_57103146_57104341_57104408_57105856_57106009_57106109_57106155_57109536_57109658_57110192_57110312_57114691_57114818_57120255_57120314_57165160
WTC11_00064459	chr3	-	994	5	NNC	ENSG00000163666.10	novel	977	4	NA	NA	0	25884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.987130729234	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTCAAGGTCACCAAATA	-57199439	True	NA	NA	False	NA	NA	NA	57199978	57171953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_57171983_57197849_57198296_57198390_57198493_57198752_57198953_57199761
WTC11_00064460	chr3	-	977	4	FSM	ENSG00000163666.10	ENST00000295934.8	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	11.0252236056942	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTGTTTTCATTAG	-57199439	True	NA	NA	False	AGTAAA	-19	NA	57199978	57197837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57198296_57198390_57198493_57198752_57198953_57199761
WTC11_00064461	chr3	-	1676	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	-80	0	80	multi-exon	TRUE	canonical	3	1709	junction_2	87.9477117382823	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTGAACAGTAACACAGA	-57579694	True	NA	NA	False	NA	NA	NA	57597344	57571282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
WTC11_00064462	chr3	-	1467	5	FSM	ENSG00000168374.11	ENST00000496292.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	797.039326194135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	-57579675	True	NA	NA	False	AATACA	-25	NA	57597325	57571391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57597073
WTC11_00064463	chr3	-	1614	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	-13	0	0	multi-exon	FALSE	canonical	3	18	junction_4	727.466012951808	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	-57579716	True	NA	NA	False	AATACA	-25	NA	57597366	57571391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
WTC11_00064466	chr3	-	4646	20	FSM	ENSG00000174839.13	ENST00000311128.10	4646	20	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	12.5112691584698	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATATTTTGTGTTATT	-57691248	True	NA	0	True	ATTAAA	-20	NA	57693077	57625453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57628346_57628810_57628886_57630420_57630524_57630714_57630825_57630924_57630979_57633264_57633355_57634557_57634623_57634703_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57659117_57659181_57660759_57660840_57661445_57661552_57663635_57663717_57666122_57666236_57672255_57672299_57672399_57672439_57692781
WTC11_00064470	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	713.850816105383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	-58428238	True	NA	18	True	ATTAAA	-42	NA	58433820	58427650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
WTC11_00064472	chr3	-	1546	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	-11	0	0	multi-exon	FALSE	canonical	3	2161	junction_3	74.7544940120659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACTGTTAGTTTGTT	-58428257	True	NA	-12	True	ATTAAA	-12	NA	58433839	58427680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
WTC11_00064476	chr3	-	3350	17	FSM	ENSG00000163689.21	ENST00000482387.7	3291	17	-55	-4	4	2	multi-exon	FALSE	canonical	3	11	junction_4	15.515617132425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAACTGCTTCTTTTCA	-59049530	True	NA	-4	True	AATAAA	-23	NA	59050080	58742003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58913707_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
WTC11_00064478	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	-61741834	False	NA	NA	False	NA	NA	NA	61743106	61742454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_61742500_61743100
WTC11_00064483	chr3	-	570	6	FSM	ENSG00000163618.18	ENST00000466621.2	570	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.1182520563948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGATGGTAAAGGTAAAAG	NA	False	NA	NA	False	AAAACA	-6	NA	62478323	62403093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62403186_62438103_62438212_62465366_62465451_62466338_62466414_62474172_62474321_62478260
WTC11_00064484	chr3	-	872	5	FSM	ENSG00000163618.18	ENST00000478570.5	2048	5	1176	0	1176	0	multi-exon	FALSE	canonical	2	9	junction_1	2.58602010819715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	62499430	62474172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62474321_62478260_62478417_62491338_62491481_62492289_62492447_62499161
WTC11_00064488	chr3	-	252	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95558	-43056	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	8.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTTTAAACCACCC	-63645098	True	NA	-17	True	AATAAA	-2	NA	63645609	63466651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_63466735_63549977_63550052_63645514
WTC11_00064489	chr3	-	894	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	-2	0	2	multi-exon	FALSE	canonical	3	411	junction_7	78.2632918879781	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGCTCATTAATATT	-63855961	True	NA	0	True	AATAAA	-19	NA	63863805	63833867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
WTC11_00064490	chr3	-	1341	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	-502	-3	-502	2	multi-exon	FALSE	canonical	3	76	junction_6	203.694556191917	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGCTCATTAATATT	-63864305	False	NA	0	True	AATAAA	-19	NA	63864370	63833867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
WTC11_00064494	chr3	-	4575	3	FSM	ENSG00000163636.11	ENST00000467853.5	4583	3	11	-3	11	0	multi-exon	FALSE	canonical	3	1228	junction_1	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-64004554	False	NA	-16	True	AATAAA	-22	NA	64017721	64010550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438
WTC11_00064495	chr3	-	2056	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	-4	0	0	multi-exon	FALSE	canonical	3	1169	junction_5	51.1750807414008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-64010270	True	NA	-16	True	AATAAA	-22	NA	64023437	64010550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
WTC11_00064497	chr3	-	1045	5	FSM	ENSG00000163636.11	ENST00000475036.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	546.75697297794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTCGGCAGTATCTGTT	-64010311	True	NA	NA	False	ATTAAA	-37	NA	64023478	64018662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023050
WTC11_00064500	chr3	-	6059	1	FSM	ENSG00000163637.13	ENST00000638436.1	4446	1	261	-1874	261	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCATTCTTCTCAGCC	NA	False	NA	-16	True	AATAAA	-17	NA	64099925	64093866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64093900_64099900
WTC11_00064515	chr3	-	3335	1	FSM	ENSG00000203647.2	ENST00000366454.2	431	1	-871	-2033	-871	2033	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTGTTTTATTTATG	-66010059	False	NA	NA	False	AAGAAA	-34	NA	66010071	66006736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_66006700_66010100
WTC11_00064516	chr3	-	5363	19	FSM	ENSG00000144749.14	ENST00000273261.8	5363	19	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_13	66.4379409674924	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGTTGGTGGTCCTTCT	-66495427	True	NA	-5	True	AATAAA	-20	NA	66501022	66378796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66462437_66462510_66500189
WTC11_00064517	chr3	-	2356	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	-6	0	6	multi-exon	FALSE	canonical	3	517	junction_4	46.75991873389	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATCTCTCATTTTACT	-67647623	True	NA	5	True	AATAAA	-28	NA	67654612	67374712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
WTC11_00064519	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.5315601582564	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
WTC11_00064520	chr3	-	4536	18	FSM	ENSG00000163378.14	ENST00000383701.8	4443	18	13	-106	0	98	multi-exon	FALSE	canonical	3	73	junction_16	12.8523690813585	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGTTTGATCAAAAAT	-69011557	True	NA	77	True	TATAAA	-24	NA	69013671	68975118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012514_69012800_69013573
WTC11_00064524	chr3	-	6879	17	FSM	ENSG00000144747.17	ENST00000398559.7	6879	17	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	15.0825851563981	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTATTTCATTTTTAAC	-69049450	True	NA	2	True	AATAAA	-17	NA	69052333	69019826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047357_69048563_69051944
WTC11_00064525	chr3	-	4867	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	24.1601913020158	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGT	-69049450	True	NA	NA	False	AATACA	-5	NA	69052333	69021847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
WTC11_00064527	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_17	89.9290377681761	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071442	True	NA	-12	True	AATAAA	-16	NA	69080365	69054729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
WTC11_00064529	chr3	-	2106	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	6	0	6	0	multi-exon	FALSE	canonical	3	82	junction_16	210.794544150815	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071479	True	NA	-12	True	AATAAA	-16	NA	69080402	69054729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
WTC11_00064530	chr3	-	1388	15	FSM	ENSG00000144744.17	ENST00000465627.5	1388	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	312.986861561638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCTTCCCTTGAAGACA	-69071454	True	NA	54	True	AATGAA	-19	NA	69080377	69055297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69071534_69071618_69075429_69075511_69077797_69077919_69080333
WTC11_00064536	chr3	-	845	6	FSM	ENSG00000114541.15	ENST00000459638.5	846	6	0	1	0	-1	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCCCCGTTTGTCAT	-69541730	True	NA	NA	False	NA	NA	NA	69542583	69287751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69287837_69302342_69302436_69311262_69311358_69313451_69313518_69432633_69432762_69542205
WTC11_00064537	chr3	-	6748	7	ISM	ENSG00000114861.24	ENST00000648426.1	2149	16	219085	-4478	0	-5	3prime_fragment	FALSE	canonical	2	4	junction_3	2.76887462097269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTGCCACAGCCTAA	NA	False	NA	NA	False	AATAAA	-25	NA	70979307	70954712	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827
WTC11_00064538	chr3	-	6575	6	NIC	ENSG00000114861.24	novel	2231	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	3.72021504754765	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTGCCACAGCCTAA	NA	False	NA	NA	False	AATAAA	-25	NA	70979307	70954712	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70976940_70977043_70977642_70977720_70977827
WTC11_00064541	chr3	-	692	6	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	0	74775	0	1115	5prime_fragment	FALSE	canonical	0	0	junction_4	4.60434577328853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGGAACAGTTGCA	-71305065	True	NA	NA	False	TATAAA	-1	NA	71306053	71052602	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71305877
WTC11_00064543	chr3	-	2235	2	FSM	ENSG00000114861.24	ENST00000650231.1	2227	2	0	-8	0	8	multi-exon	FALSE	canonical	3	23	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCTCAAAAAAAAAAAAAAA	-71582858	True	NA	NA	False	TTTAAA	-11	NA	71583762	71579654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71581698_71583570
WTC11_00064544	chr3	-	9971	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	7	0	-7	multi-exon	FALSE	canonical	3	228	junction_1	17.5119007154183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAAGCTTGCTTTTCTG	-71722975	True	NA	NA	False	ATTAAA	-9	NA	71725402	71675420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
WTC11_00064545	chr3	-	6209	8	FSM	ENSG00000163412.13	ENST00000448225.5	6209	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	107.681882204492	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGAGTGTTTCTGAG	-71754348	False	NA	-28	True	ATTAAA	-34	NA	71754383	71679288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71728475_71728624_71754214
WTC11_00064549	chr3	-	1957	3	FSM	ENSG00000163421.9	ENST00000353065.7	1549	3	-197	-211	-197	210	multi-exon	FALSE	canonical	2	6	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAAAACTGATTGTAAT	-71785345	True	NA	NA	False	CATAAA	-36	NA	71785403	71771444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71772829_71781466_71781593_71784956
WTC11_00064550	chr3	-	1555	4	FSM	ENSG00000163421.9	ENST00000295619.4	1555	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTGTCAGTTTTTAT	-71785090	False	NA	-1	True	NA	NA	NA	71785148	71771654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71772829_71774444_71774508_71781466_71781593_71784956
WTC11_00064551	chr3	-	7182	4	FSM	ENSG00000163602.12	ENST00000477973.5	7215	4	-2	35	-2	-35	multi-exon	FALSE	canonical	3	18	junction_3	2.62466929133727	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATCATTAAACATTCG	-72446589	False	NA	-34	True	AATGAA	-7	NA	72446623	72371859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495
WTC11_00064554	chr3	-	880	1	FSM	ENSG00000240135.1	ENST00000490962.1	1366	1	379	107	379	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAATTTATGAAATGA	NA	False	NA	NA	False	NA	NA	NA	72877723	72876843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72876800_72877700
WTC11_00064556	chr3	-	757	3	FSM	ENSG00000121440.15	ENST00000478209.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCATCGTGCGCGCCC	NA	False	NA	NA	False	NA	NA	NA	73388146	73384469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_73384931_73385668_73385786_73387967
WTC11_00064557	chr3	-	272	1	FSM	ENSG00000243674.1	ENST00000479200.1	955	1	144	539	144	-539	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATATCATTCAGCCA	NA	False	NA	NA	False	NA	NA	NA	75348643	75348371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75348400_75348600
WTC11_00064558	chr3	-	2231	5	FSM	ENSG00000244026.7	ENST00000686855.1	2026	5	79	-284	2	274	multi-exon	FALSE	canonical	3	14	junction_2	27.5454170416786	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCAGCATCATTTGTGG	-75433533	True	NA	NA	False	NA	NA	NA	75435046	75421277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434917
WTC11_00064562	chr3	-	2384	2	ISM	ENSG00000227124.11	ENST00000477374.5	1169	6	51768	0	51273	0	3prime_fragment	TRUE	canonical	3	22	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	NA	False	NA	-5	True	AATAAA	-30	NA	75733785	75729960	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_75730619_75732059
WTC11_00064563	chr3	-	1169	6	FSM	ENSG00000227124.11	ENST00000477374.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	15.8568597143318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782608	True	NA	-5	True	AATAAA	-30	NA	75785553	75729960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75785383
WTC11_00064565	chr3	-	8967	30	NIC	ENSG00000169855.21	novel	5600	29	NA	NA	-167	1280	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	60.9408594229332	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTGTTGCTCTTG	-79019611	False	NA	-5	True	AATAAA	-14	NA	79019626	78595958	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78647628_78647656_78651731_78651930_78657097_78657270_78659685_78659808_78661029_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
WTC11_00064567	chr3	-	7370	29	FSM	ENSG00000169855.21	ENST00000467549.5	4841	29	-959	-1570	-44	-2	multi-exon	FALSE	canonical	0	0	junction_22	68.1382429554888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTCTTTCTTGTGTTG	-79016452	True	NA	-31	True	ATTAAA	-15	NA	79019503	78597240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78635944_78639743_78639899_78646147_78646191_78651731_78651930_78657097_78657270_78659685_78659808_78661029_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
WTC11_00064570	chr3	-	2942	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	24.7318058827539	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGCTAATGTTTATT	-81761358	True	NA	-4	True	AATAAA	-16	NA	81761645	81489701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
WTC11_00064571	chr3	-	3093	16	NNC	ENSG00000114480.13	novel	2941	16	NA	NA	-151	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	64	junction_9	12.9089116504839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGCTAATGTTTATT	-81761778	False	NA	-4	True	AATAAA	-16	NA	81761796	81489701	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_81490464_81499109_81499226_81535192_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
WTC11_00064575	chr3	-	624	3	FSM	ENSG00000206538.9	ENST00000494229.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGTGACATCACAAAGA	-86990674	False	NA	NA	False	NA	NA	NA	86990702	86968702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_86969124_86978525_86978644_86990617
WTC11_00064576	chr3	-	363	1	FSM	ENSG00000241293.1	ENST00000496669.1	1547	1	1302	-118	1302	118	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTATAAGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	87051436	87051073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_87051100_87051400
WTC11_00064577	chr3	-	4551	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	-3	0	-3	multi-exon	FALSE	canonical	3	87	junction_2	373.652542105928	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTACTGAGTTATTTT	-88048790	True	NA	51	True	AATATA	-22	NA	88059005	88051946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
WTC11_00064578	chr3	-	4489	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	6	0	0	multi-exon	FALSE	canonical	3	721	junction_1	83.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-88048833	True	NA	48	True	AATATA	-19	NA	88059048	88051949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88056000_88058018_88058224_88058814
WTC11_00064583	chr3	-	403	4	ISM	ENSG00000283544.1	ENST00000637477.1	838	7	91979	-8	91979	8	3prime_fragment	FALSE	canonical	3	29	junction_3	21.249836600679	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCCATTTTCCTCAATA	NA	False	NA	NA	False	NA	NA	NA	91421796	91374227	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_91374467_91387965_91388035_91416546_91416630_91421784
WTC11_00064586	chr3	-	3855	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTCTGAATCTCTAAT	-94062754	True	NA	-10	True	AATAAA	-16	NA	94062916	94057922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94061607_94062745
WTC11_00064588	chr3	-	1067	1	FSM	ENSG00000178660.6	ENST00000313754.4	855	1	679	-891	679	891	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCAACAAGAGCAAAACT	NA	False	NA	NA	False	NA	NA	NA	94506941	94505874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94505900_94506900
WTC11_00064589	chr3	-	817	1	FSM	ENSG00000269028.3	ENST00000600213.3	1049	1	187	45	187	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGACCTACCCGTGA	NA	False	NA	NA	False	NA	NA	NA	96618049	96617232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_96617200_96618000
WTC11_00064590	chr3	-	2584	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	-352	0	-8	0	multi-exon	FALSE	canonical	2	5	junction_9	38.0383172636082	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	-97971040	True	NA	NA	False	TATAAA	-11	NA	97972439	97944559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
WTC11_00064595	chr3	-	2173	5	FSM	ENSG00000080822.17	ENST00000341181.11	2010	5	-29	-134	0	131	multi-exon	FALSE	canonical	3	632	junction_4	72.5844335928855	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTTTGATCTTCTGG	-98512474	True	NA	NA	False	NA	NA	NA	98522931	98515348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522848
WTC11_00064596	chr3	-	2828	5	FSM	ENSG00000080822.17	ENST00000503004.5	2818	5	0	-10	0	7	multi-exon	FALSE	canonical	3	50	junction_4	320.211258390457	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTGTCTGAATTGAT	-98512057	False	NA	-3	True	AATAAA	-29	NA	98522514	98515472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652
WTC11_00064597	chr3	-	2159	6	FSM	ENSG00000080822.17	ENST00000394180.6	2228	6	69	0	-12	0	multi-exon	FALSE	canonical	3	21	junction_5	368.959293147632	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTATATAGAGTGTCTG	-98512540	True	NA	-10	True	AATAAA	-22	NA	98522997	98515479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521704_98522848
WTC11_00064598	chr3	-	2180	6	FSM	ENSG00000080822.17	ENST00000394181.6	2170	6	0	-10	0	7	multi-exon	FALSE	canonical	2	7	junction_5	372.515019831416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTGTCTGAATTGAT	-98512561	True	NA	-3	True	AATAAA	-29	NA	98523018	98515472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521697_98522848
WTC11_00064610	chr3	-	2711	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	1	-3	0	3	multi-exon	FALSE	canonical	3	124	junction_2	6.89605362185907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTATATTTTTTGTTGC	-98590669	True	NA	NA	False	AATAAA	-26	NA	98593610	98579442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
WTC11_00064611	chr3	-	6127	17	NNC	ENSG00000057019.16	novel	6128	16	NA	NA	0	29535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.1880465761293	656	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGACATTTATGCAAAGA	-98895885	True	NA	NA	False	NA	NA	NA	98901695	98766405	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_98766438_98795973_98799842_98800578_98800717_98801599_98801650_98808080_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768_98817894_98819201_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
WTC11_00064618	chr3	-	2538	7	FSM	ENSG00000138468.16	ENST00000394085.7	1483	7	212	-1267	212	0	multi-exon	FALSE	canonical	3	71	junction_6	10.6458129484475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	101333057	101324272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769
WTC11_00064619	chr3	-	4970	24	FSM	ENSG00000138468.16	ENST00000394095.7	4973	24	1	2	1	-2	multi-exon	FALSE	canonical	3	44	junction_7	11.3663849571589	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTGTGTATATCATGAA	-101512333	True	NA	NA	False	AATAAA	-16	NA	101513211	101324206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
WTC11_00064620	chr3	-	4434	21	FSM	ENSG00000138468.16	ENST00000394091.5	4434	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_18	22.2132280409669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-101512306	True	NA	NA	False	ATTAAA	-21	NA	101513184	101324272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101458954_101459053_101493872_101493969_101513090
WTC11_00064621	chr3	-	4703	23	FSM	ENSG00000138468.16	ENST00000394094.6	4703	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	17.1191739199787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-101512327	True	NA	NA	False	ATTAAA	-21	NA	101513205	101324272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
WTC11_00064624	chr3	-	492	1	FSM	ENSG00000282978.1	ENST00000635481.1	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTCAACTTCTGAAGA	-101457718	False	NA	NA	False	NA	NA	NA	101457732	101457240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101457200_101457700
WTC11_00064626	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101576500_101576900
WTC11_00064627	chr3	-	5591	11	FSM	ENSG00000066422.6	ENST00000312938.5	5657	11	0	66	0	-66	multi-exon	FALSE	canonical	3	39	junction_9	10.0299551344959	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATAAAATCCCCTGCAT	-101638425	False	38707	NA	False	NA	NA	NA	101677132	101648954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101651684_101652495_101652672_101652779_101652939_101654703_101654822_101656103_101656249_101659782_101660029_101664537_101664715_101664963_101665809_101671129_101671362_101671977_101672214_101676604
WTC11_00064629	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7395	junction_1	521.029029901406	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648005	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
WTC11_00064630	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_5	1337.9815544319	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648011	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
WTC11_00064631	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	3286.78676673739	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	-101647998	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
WTC11_00064632	chr3	-	1857	2	FSM	ENSG00000114391.13	ENST00000488288.1	1857	2	0	0	0	0	multi-exon	FALSE	canonical	3	8004	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTAAATAAAGATTGG	-101647182	False	552	-1	True	NA	NA	NA	101685889	101681122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101682908_101685817
WTC11_00064633	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_4	1493.51270081643	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-101647988	True	NA	NA	False	NA	NA	NA	101686695	101682041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
WTC11_00064634	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	19.0237830356545	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-105866159	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
WTC11_00064635	chr3	-	5234	2	FSM	ENSG00000114423.23	ENST00000476370.1	4722	2	-512	0	-512	0	multi-exon	FALSE	canonical	3	91	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGAGGAGCTTCCCTTTT	NA	False	NA	-4	True	AATAAA	-29	NA	105674505	105658268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_105659230_105670232
WTC11_00064637	chr3	-	3679	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4798520807365	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTATGTAT	-105866186	True	NA	NA	False	NA	NA	NA	105869039	105658404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
WTC11_00064643	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	45.766902615318	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088330	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
WTC11_00064644	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	27.3685951411467	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088336	True	NA	NA	False	ATTAAA	-19	NA	108091031	108043090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
WTC11_00064648	chr3	-	1017	4	FSM	ENSG00000114446.5	ENST00000465024.1	755	4	-75	-187	0	187	multi-exon	FALSE	canonical	3	333	junction_3	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAAAAGAATTTAGGAT	-108216789	True	NA	NA	False	AATAAA	-12	NA	108222435	108213611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108214022_108218534_108218654_108219409_108219573_108222110
WTC11_00064649	chr3	-	509	1	FSM	ENSG00000241634.1	ENST00000489433.1	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATACCAAAGGAATATA	-108543864	False	NA	NA	False	NA	NA	NA	108543875	108543366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108543400_108543900
WTC11_00064651	chr3	-	2571	8	NNC	ENSG00000121570.13	novel	2788	7	NA	NA	0	47271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1758.66392933003	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCCTCAAGGCTGTAT	-109266307	True	NA	NA	False	AAAAAG	-2	NA	109337515	109278872	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109278899_109326355_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
WTC11_00064652	chr3	-	1391	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	-8	0	8	multi-exon	FALSE	canonical	3	41	junction_8	20.2530861845794	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTAAAGATCCATC	-109316494	False	NA	4	True	AATAAA	-30	NA	109316517	109293779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
WTC11_00064653	chr3	-	2822	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-8	-26	8	multi-exon	FALSE	canonical	3	3947	junction_6	704.701453729797	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTATTTACTCATCTT	-109266364	True	NA	3	True	AATAAA	-26	NA	109337572	109326135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
WTC11_00064654	chr3	-	3043	2	FSM	ENSG00000121570.13	ENST00000475135.1	3043	2	0	0	0	0	multi-exon	FALSE	canonical	3	6055	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTTGTATGACTC	-109330647	False	NA	-16	True	AGTAAA	-13	NA	109330760	109326852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_109328025_109328889
WTC11_00064665	chr3	-	3010	11	FSM	ENSG00000144848.11	ENST00000402314.6	3010	11	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_8	31.7332633052449	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554187	True	NA	-3	True	AATAAA	-17	NA	112561916	112532509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
WTC11_00064666	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_9	49.4373298912558	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554233	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
WTC11_00064669	chr3	-	11732	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	569	0	-569	multi-exon	TRUE	canonical	2	5	junction_5	7.69839633446142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCCCATGTAAGGATCA	-112640846	False	NA	NA	False	NA	NA	NA	112641143	112597365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
WTC11_00064671	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_7	17.6913644188344	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016129	True	NA	-4	True	ATTAAA	-18	NA	113019671	113002443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
WTC11_00064672	chr3	-	2179	8	FSM	ENSG00000163608.15	ENST00000472637.5	2179	8	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_6	43.3156426474222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTAATTTTATTTATTT	-113016112	True	NA	-12	True	ATTAAA	-23	NA	113019654	113004916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013948_113014033_113019541
WTC11_00064673	chr3	-	2172	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	207	-323	0	-3	multi-exon	FALSE	canonical	3	49	junction_7	25.392430175233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTTTTAATTTTATTTA	-113016112	True	NA	-15	True	ATTAAA	-20	NA	113019654	113004919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
WTC11_00064675	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_17	20.300510502044	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	-113513820	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
WTC11_00064676	chr3	-	3378	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	-18	631	intron_retention	FALSE	canonical	0	0	junction_17	26.5616733537155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGATTTAATGGTAT	NA	False	NA	8	True	AATAAA	-33	NA	113515205	113444622	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
WTC11_00064680	chr3	-	6764	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	-54	-5752	-3	620	multi-exon	FALSE	canonical	1	20	junction_3	623.695588809156	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTCCGCCACCTAGAT	-113746285	False	NA	NA	False	NA	NA	NA	113746303	113715837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
WTC11_00064681	chr3	-	6112	5	FSM	ENSG00000121579.14	ENST00000240922.8	6112	5	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_4	214.984301752477	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATTGCTTATGCAGG	-113716388	True	NA	-5	True	AATAAA	-17	NA	113746249	113716457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724096_113745941
WTC11_00064683	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_4	511.14723906131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	-113746282	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
WTC11_00064684	chr3	-	228	1	FSM	ENSG00000240776.1	ENST00000485426.1	495	1	-5	272	-5	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	2620	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGTATCTCCATGATT	NA	False	NA	NA	False	NA	NA	NA	113850736	113850508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113850500_113850700
WTC11_00064685	chr3	-	566	1	FSM	ENSG00000273394.1	ENST00000609657.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTCGATCATTTTTG	-113947549	False	NA	NA	False	AATAAA	-14	NA	113947570	113947004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113947000_113947600
WTC11_00064687	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	51.2150328696247	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	-119237675	False	2964	6	True	AGTAAA	-23	NA	119240639	119211731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
WTC11_00064688	chr3	-	2244	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	-10	0	0	multi-exon	FALSE	canonical	3	95	junction_6	27.3361538282628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	-119237914	True	NA	6	True	AGTAAA	-23	NA	119240878	119211731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
WTC11_00064689	chr3	-	5798	7	FSM	ENSG00000121578.13	ENST00000467604.5	5794	7	0	-4	0	-4	multi-exon	FALSE	canonical	3	95	junction_5	28.1982071928144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTCGTGTTTTTTAT	-119237914	True	NA	2	True	AGTAAA	-19	NA	119240878	119211735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
WTC11_00064691	chr3	-	3029	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	-922	0	-922	0	multi-exon	TRUE	canonical	3	19	junction_2	50.4658850666027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	-119235029	False	NA	-41	True	AATAAA	-4	NA	119237993	119211778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
WTC11_00064693	chr3	-	641	3	FSM	ENSG00000121578.13	ENST00000470111.5	641	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTGGGGAAGGGAAAAA	-119237914	True	NA	NA	False	NA	NA	NA	119240878	119229935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119230245_119236852_119237071_119240764
WTC11_00064695	chr3	-	3043	4	FSM	ENSG00000176142.13	ENST00000473684.5	3043	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.744632351213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTTGGCAAGTTAAA	-119436801	False	NA	-3	True	ATTAAA	-19	NA	119436816	119429499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119432215_119434761_119434883_119435754_119435936_119436790
WTC11_00064696	chr3	-	3107	9	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	-2	-1135	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	56.1146983864299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGTGTATACTTTTT	-119461809	True	NA	-29	True	TTTAAA	-23	NA	119463599	119430634	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462105_119463335
WTC11_00064703	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1279.15623231358	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662236	True	NA	-17	True	AGTAAA	-16	NA	119677346	119669531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
WTC11_00064704	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2764	junction_1	276.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662296	True	NA	-17	True	AGTAAA	-16	NA	119677406	119669531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119669666_119675144_119675234_119677203
WTC11_00064705	chr3	-	800	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	-93	-47	-3	47	multi-exon	FALSE	canonical	3	66	junction_1	1625.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTGTCACTTCACAC	-119662347	False	NA	NA	False	NA	NA	NA	119677457	119674331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119674789_119675144_119675234_119677203
WTC11_00064706	chr3	-	9101	12	FSM	ENSG00000082701.17	ENST00000316626.6	7000	12	-2098	-3	-770	2	multi-exon	FALSE	canonical	3	14	junction_3	42.5703113091586	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGTCCTCTTATTTA	-120095669	True	NA	NA	False	AATAAA	-20	NA	120095764	119821318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119866589_119866629_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
WTC11_00064707	chr3	-	7748	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	-5	0	5	multi-exon	FALSE	canonical	3	109	junction_1	10.8300507847378	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCTCTTATTTATTT	-120092584	True	NA	NA	False	AATAAA	-23	NA	120094447	119821315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
WTC11_00064708	chr3	-	422	4	FSM	ENSG00000082701.17	ENST00000677995.1	422	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	62.7021176321466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGATTTTTTTTTA	-119916154	False	20	NA	False	TTTAAA	-34	NA	119916174	119876412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119876509_119905754_119905853_119912703_119912801_119916043
WTC11_00064711	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	73.5568487633884	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	-120434936	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
WTC11_00064712	chr3	-	428	5	FSM	ENSG00000163430.12	ENST00000464690.5	1423	5	0	995	0	-995	multi-exon	FALSE	canonical	3	1027	junction_4	93.592200529745	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCTATTTTTTCTA	-120434937	True	NA	NA	False	AAGAAA	-26	NA	120450993	120410951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
WTC11_00064714	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	10.6291858501362	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	-120739378	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
WTC11_00064715	chr3	-	781	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	-21	0	0	multi-exon	FALSE	canonical	3	16	junction_2	56.4170974872768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	-120739382	True	NA	NA	False	NA	NA	NA	120742520	120689693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
WTC11_00064716	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	67.8449519124304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	-120739395	True	NA	NA	False	NA	NA	NA	120742533	120689693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
WTC11_00064717	chr3	-	8762	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	-5	0	5	multi-exon	FALSE	canonical	3	40	junction_24	21.6780024616044	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACAATTGTTTTGTTA	-121542242	True	NA	-7	True	AATAAA	-22	NA	121545988	121431425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
WTC11_00064719	chr3	-	479	5	FSM	ENSG00000180353.11	ENST00000481314.5	1069	5	0	590	0	-2	multi-exon	FALSE	canonical	3	10	junction_3	0.82915619758885	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTGACCACTCTCTC	-121660833	True	NA	NA	False	NA	NA	NA	121660901	121644819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
WTC11_00064721	chr3	-	11202	22	FSM	ENSG00000173230.16	ENST00000393667.7	11198	22	0	-4	0	0	multi-exon	FALSE	canonical	3	32	junction_16	51.4841410537784	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTATGTGTGTGT	-121742902	True	NA	NA	False	AATAAA	-20	NA	121749740	121663198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669196_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
WTC11_00064722	chr3	-	11187	22	FSM	ENSG00000173230.16	ENST00000340645.9	11187	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	51.848943337064	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTATGTGTGTGT	-121742917	True	NA	NA	False	AATAAA	-20	NA	121749755	121663198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719754_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
WTC11_00064727	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	19.2130907753765	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-121831210	True	NA	0	True	ATTAAA	-18	NA	121835060	121769760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
WTC11_00064729	chr3	-	2239	14	FSM	ENSG00000173226.17	ENST00000393650.7	2253	14	14	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_5	59.1328861535785	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831215	True	NA	-2	True	AATAAA	-26	NA	121835065	121769993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
WTC11_00064730	chr3	-	988	9	FSM	ENSG00000173226.17	ENST00000460108.5	988	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	70.6628217310914	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTAAAAAAATTTGGTG	-121831183	True	NA	NA	False	ATTAAA	-39	NA	121835033	121795460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828860_121828973_121834390_121834480_121834965
WTC11_00064731	chr3	-	701	7	FSM	ENSG00000173226.17	ENST00000498104.1	701	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	99.8739483326636	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAGTCAAGAACTTAGAC	-121831166	True	NA	NA	False	AGTAAA	-18	NA	121835016	121797187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121797228_121799195_121799375_121807343_121807444_121826050_121826181_121828860_121828973_121834390_121834480_121834965
WTC11_00064732	chr3	-	2758	7	FSM	ENSG00000145103.15	ENST00000273691.7	2659	7	-99	0	-35	0	multi-exon	FALSE	canonical	3	7	junction_2	7.49258893099634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021888	True	NA	0	True	AATAAA	-15	NA	122022282	121987322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121988409_121993149_121993971_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
WTC11_00064733	chr3	-	2855	8	FSM	ENSG00000145103.15	ENST00000344209.10	2855	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	5.02646059593119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021853	True	NA	0	True	AATAAA	-15	NA	122022247	121987322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121988409_121993149_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
WTC11_00064734	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	49.4797938556741	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-122373306	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
WTC11_00064736	chr3	-	569	5	NIC	ENSG00000160124.9	novel	720	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	207.546832064476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	-122373302	True	NA	NA	False	NA	NA	NA	122383227	122359645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_122359828_122362967_122363028_122368175_122368323_122371674_122371801_122383173
WTC11_00064737	chr3	-	796	6	NIC	ENSG00000160124.9	novel	720	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	259.286713890242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	-122373306	True	NA	NA	False	NA	NA	NA	122383231	122359645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_122359920_122362967_122363028_122365335_122365467_122368175_122368323_122371674_122371801_122383173
WTC11_00064738	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	250.460575739975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	-122373302	True	NA	62	True	NA	NA	NA	122383227	122359787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
WTC11_00064739	chr3	-	431	5	FSM	ENSG00000160124.9	ENST00000479414.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	244.495909986241	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTTTTTTT	-122373002	False	NA	-12	True	AATAAA	-7	NA	122373022	122359861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122372982
WTC11_00064741	chr3	-	4217	1	FSM	ENSG00000196981.4	ENST00000330689.6	4217	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGCTCATGCCTGTAAT	-122415736	True	NA	NA	False	AATAAA	-17	NA	122416062	122411845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122411800_122416100
WTC11_00064750	chr3	-	4836	23	FSM	ENSG00000082684.16	ENST00000357599.8	4855	23	6	13	6	-13	multi-exon	FALSE	canonical	3	23	junction_22	13.693516593418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCAAGTAGCCTTATCT	-123026645	True	NA	91	True	NA	NA	NA	123027757	122909094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913533_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
WTC11_00064752	chr3	-	4579	22	NIC	ENSG00000082684.16	novel	4855	23	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_21	12.384981029539	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCATCTGTGCG	-123026645	True	NA	-4	True	ATTAAA	-21	NA	123027757	122909189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913533_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
WTC11_00064754	chr3	-	4415	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101346	-2279	3156	-3	3prime_fragment	FALSE	canonical	3	97	junction_8	16.7648957167965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTCCTGGTCTGATT	-123314767	False	NA	-3	True	ATTAAA	-13	NA	123314996	123282298	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
WTC11_00064755	chr3	-	384	4	FSM	ENSG00000173175.15	ENST00000474577.5	480	4	0	96	0	-96	multi-exon	FALSE	canonical	3	97	junction_3	11.3431330181157	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGATGCTCCTCGGA	NA	False	NA	NA	False	NA	NA	NA	123304079	123297352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123297383_123300119_123300296_123303054_123303220_123304066
WTC11_00064758	chr3	-	4133	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	-8	0	8	multi-exon	FALSE	canonical	3	208	junction_1	15.1520075677559	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGTGCAGTGATTTTTC	-123582129	True	NA	0	True	AATAAA	-37	NA	123585053	123491545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
WTC11_00064759	chr3	-	9953	34	FSM	ENSG00000065534.20	ENST00000360304.8	10113	34	0	160	0	-160	multi-exon	FALSE	canonical	3	11	junction_33	6.17394031608906	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGTTGTATGAGTT	-123883537	True	NA	NA	False	AATAAA	-13	NA	123884332	123610208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123732895_123733103_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123752330_123752539_123793676_123793845_123831547_123831671_123876558_123876618_123884205
WTC11_00064760	chr3	-	1269	3	FSM	ENSG00000065534.20	ENST00000685744.1	2510	3	197	1044	55	145	multi-exon	FALSE	canonical	1	3	junction_2	14	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTAATGTGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	123620336	123613339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123614350_123618638_123618768_123620206
WTC11_00064761	chr3	-	5901	33	FSM	ENSG00000065534.20	ENST00000464489.5	5901	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	7.34840278138726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGATAGTAAAAGCACC	-123883513	True	NA	NA	False	ATTAAA	-38	NA	123884308	123614028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123732895_123733103_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123793676_123793845_123831547_123831671_123876558_123876618_123884205
WTC11_00064762	chr3	-	5908	33	FSM	ENSG00000065534.20	ENST00000693689.1	7398	33	0	1490	0	0	multi-exon	FALSE	canonical	1	4	junction_23	7.10963255027994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGATAGTAAAAGCACC	-123883519	True	NA	NA	False	ATTAAA	-38	NA	123884314	123614028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123752330_123752539_123793676_123793845_123831547_123831671_123876558_123876618_123884205
WTC11_00064763	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	49.9797181086711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	-123956561	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
WTC11_00064764	chr3	-	4144	12	FSM	ENSG00000175455.16	ENST00000488653.6	4156	12	30	-18	0	-13	multi-exon	FALSE	canonical	3	27	junction_8	63.0285256159647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAAAAAATTGTGTC	-123956710	True	NA	NA	False	AATAAA	-10	NA	123961378	123913434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
WTC11_00064765	chr3	-	3815	12	FSM	ENSG00000175455.16	ENST00000409657.5	3815	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	71.6770765711404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAACCTCCTCGTGTT	-123956604	True	NA	-37	True	ATTAAA	-15	NA	123961272	123913724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123961143
WTC11_00064767	chr3	-	6476	9	FSM	ENSG00000175455.16	ENST00000489746.5	6476	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	37.8648913903104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGAACCTCCTCGTG	-123958887	False	NA	-39	True	ATTAAA	-13	NA	123958900	123913726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842
WTC11_00064783	chr3	-	7797	13	ISM	ENSG00000173706.14	ENST00000650592.1	6164	14	4400	-1784	4400	-3	3prime_fragment	TRUE	canonical	2	14	junction_12	4.8904669170404	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGTTTTCCTCTT	NA	False	NA	-3	True	AATAAA	-14	NA	125015012	124965712	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_124970802_124973730_124973906_124977858_124977947_124990786_124990825_124990943_124990987_124997688_124997824_125001851_125002013_125002256_125002316_125005264_125005369_125009704_125009825_125010438_125010556_125012622_125013991_125014712
WTC11_00064784	chr3	-	9297	17	FSM	ENSG00000173706.14	ENST00000311127.9	9195	17	-105	3	-105	-3	multi-exon	FALSE	canonical	2	8	junction_12	5.68131531865641	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGTTTTCCTCTT	-125055451	True	NA	-3	True	AATAAA	-14	NA	125056102	124965712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124970802_124973730_124973906_124977858_124977947_124990786_124990825_124990943_124990987_124997688_124997824_125001851_125002013_125002256_125002316_125005264_125005369_125009704_125009825_125010438_125010556_125012622_125013991_125019261_125019598_125020791_125021131_125027204_125027508_125029194_125029489_125055574
WTC11_00064793	chr3	-	9483	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	64	-6587	0	-72	multi-exon	FALSE	canonical	3	6	junction_7	27.7919963609741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTCTACATGATACTT	-125374195	True	NA	-74	True	NA	NA	NA	125375249	125225740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
WTC11_00064797	chr3	-	2518	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	-6	0	6	multi-exon	FALSE	canonical	3	211	junction_10	22.546992347214	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTTTGTTAATTTAA	-125515215	True	NA	-1	True	AATAAA	-27	NA	125520202	125446643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
WTC11_00064798	chr3	-	2496	14	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	68.271560090273	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGATTTTTGTTAA	-125515202	True	NA	-6	True	AATAAA	-22	NA	125520189	125446648	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497980_125498058_125498195_125504622_125504745_125520031
WTC11_00064799	chr3	-	2596	15	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	89.4384122837427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515184	True	NA	-7	True	AATAAA	-21	NA	125520171	125446649	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125447827_125449296_125449412_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
WTC11_00064801	chr3	-	4691	13	FSM	ENSG00000144909.8	ENST00000296220.6	4598	13	-93	0	-93	0	multi-exon	TRUE	canonical	3	69	junction_8	11.206087135521	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTCTGTCTCTTTTA	-125594208	True	NA	NA	False	AATAAA	-17	NA	125595590	125528857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
WTC11_00064803	chr3	-	2360	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	-178	0	2	0	multi-exon	FALSE	canonical	3	28	junction_10	11.883181392203	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126084208	True	NA	-1	True	AATAAA	-21	NA	126084302	126006356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
WTC11_00064804	chr3	-	1925	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	-25	-103	-25	87	multi-exon	FALSE	canonical	3	12	junction_1	17.2617189801236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTCAAAGTGGCCTTCA	NA	False	NA	86	True	TATAAA	-34	NA	126084329	126006269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
WTC11_00064805	chr3	-	1703	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	2	0	2	0	multi-exon	FALSE	canonical	3	9	junction_9	22.4341257908571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126084208	True	NA	-1	True	AATAAA	-21	NA	126084302	126006356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
WTC11_00064806	chr3	-	2580	3	FSM	ENSG00000163884.4	ENST00000296233.4	2540	3	-38	-2	-38	2	multi-exon	FALSE	canonical	3	19	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCATGTGCTGT	-126356465	True	NA	-7	True	AATAAA	-20	NA	126357446	126342632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126343896_126351840_126352948_126357236
WTC11_00064808	chr3	-	3513	10	FSM	ENSG00000070476.15	ENST00000389709.8	3377	10	-136	0	-136	0	multi-exon	FALSE	canonical	3	35	junction_3	27.4752413799932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	-126473988	True	NA	0	True	TATAAA	-41	NA	126476027	126437600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126438462_126439631_126439728_126441764_126441947_126459652_126459738_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
WTC11_00064811	chr3	-	2701	15	FSM	ENSG00000197763.20	ENST00000523403.3	2351	15	0	-350	0	-89	multi-exon	FALSE	canonical	2	8	junction_3	13.5699247287101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGTGAAATCTAACTAA	-126654769	True	NA	NA	False	NA	NA	NA	126655101	126607138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
WTC11_00064812	chr3	-	2921	16	FSM	ENSG00000197763.20	ENST00000524230.9	2921	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	6.24179461373089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGGTTGCATGGGA	-126654792	True	NA	NA	False	CATAAA	-14	NA	126655124	126607049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126615354_126615463_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
WTC11_00064813	chr3	-	3728	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	24	0	10	multi-exon	TRUE	canonical	3	154	junction_4	25.4251843651133	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCAGGTGGGTTCTGG	-127589464	True	NA	NA	False	AATAAA	-19	NA	127590733	127571255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
WTC11_00064816	chr3	-	1781	9	NIC	ENSG00000163870.16	novel	1831	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	85.1534460547546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAATGTGGAGGTTT	-127589465	True	NA	-13	True	AATAAA	-17	NA	127590734	127573069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575939_127576051_127576616_127576697_127576989_127577077_127579739_127579873_127580021_127580164_127590409
WTC11_00064821	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_6	75.6198386668472	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-128107832	True	NA	NA	False	NA	NA	NA	128123812	128080809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
WTC11_00064823	chr3	-	3284	6	ISM	ENSG00000179348.12	ENST00000487848.5	1878	7	615	-1591	1	-1	3prime_fragment	FALSE	canonical	2	5	junction_3	2.33238075793812	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCCTGGCCTGTCTTGT	-128487823	True	NA	NA	False	AATAAA	-14	NA	128487915	128479427	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_128481319_128481818_128481945_128483859_128484006_128485726_128486369_128486802_128487077_128487710
WTC11_00064824	chr3	-	2304	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	-20	0	20	multi-exon	FALSE	canonical	3	1424	junction_5	72.1840924988085	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATAATTTAATTCTTA	-128617389	True	NA	-1	True	AATAAA	-40	NA	128650818	128619948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
WTC11_00064826	chr3	-	360	1	FSM	ENSG00000242992.3	ENST00000480365.1	553	1	347	-154	347	154	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGTACCAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-8	NA	128764671	128764311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128764300_128764700
WTC11_00064827	chr3	-	4479	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	-1	0	1	multi-exon	FALSE	canonical	3	142	junction_2	9	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGCCCAGGACTGGTT	-129121428	True	NA	-9	True	ATTAAA	-19	NA	129121804	129087570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129091347_129094985_129095170_129121285
WTC11_00064829	chr3	-	3612	11	FSM	ENSG00000240682.10	ENST00000393295.8	3612	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	14.5068949124201	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCTCTGCCTGTGGT	-129158745	True	NA	-1	True	AATAAA	-23	NA	129161063	129127414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
WTC11_00064833	chr3	-	3304	5	FSM	ENSG00000169714.17	ENST00000422453.7	3295	5	0	-9	0	9	multi-exon	FALSE	canonical	3	3585	junction_3	1403.3101047167	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGTATGAAACAGCATAA	-129109124	True	NA	-18	True	AATAAA	-26	NA	129183896	129167817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171278_129171445_129171539_129171633_129171772_129183775
WTC11_00064834	chr3	-	1626	5	FSM	ENSG00000169714.17	ENST00000502976.5	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	2548	junction_3	1743.31270502455	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-129109133	True	NA	-6	True	ATTAAA	-24	NA	129183905	129169483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171278_129171445_129171539_129171654_129171772_129183775
WTC11_00064835	chr3	-	1644	5	FSM	ENSG00000169714.17	ENST00000451728.6	1641	5	0	-3	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2738.93112135008	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-129109127	True	NA	-6	True	ATTAAA	-24	NA	129183899	129169483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171281_129171445_129171539_129171633_129171772_129183775
WTC11_00064836	chr3	-	1626	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	-3	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2832.97595295124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-129109127	True	NA	-6	True	ATTAAA	-24	NA	129183899	129169483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
WTC11_00064837	chr3	-	1540	5	NIC	ENSG00000169714.17	novel	1549	5	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	3259.67646975892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109138	True	NA	-21	True	AATAAA	-27	NA	129183910	129169568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129170571_129171078_129171281_129171445_129171509_129171633_129171772_129183775
WTC11_00064839	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	2617.06194997367	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109150	True	NA	-21	True	AATAAA	-27	NA	129183922	129169568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
WTC11_00064844	chr3	-	431	3	Genic_Genomic	ENSG00000184897.6	novel	1516	1	NA	NA	1141	63858	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCATAACTAACTC	-129314760	False	NA	NA	False	NA	NA	NA	129315145	129250912	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_129250939_129308409_129308440_129314770
WTC11_00064845	chr3	-	432	3	Genic_Genomic	ENSG00000184897.6	novel	1516	1	NA	NA	1141	63858	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCATAACTAACTC	-129314760	False	NA	NA	False	NA	NA	NA	129315145	129250912	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_129250940_129308409_129308440_129314770
WTC11_00064846	chr3	-	1516	1	FSM	ENSG00000184897.6	ENST00000333762.6	1516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	645	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCGTTTAATCTGA	-129315901	False	NA	-6	True	AATAAA	-17	NA	129316286	129314770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129314800_129316300
WTC11_00064847	chr3	-	2237	5	FSM	ENSG00000251474.7	ENST00000510078.5	2161	5	-14	-62	0	62	multi-exon	FALSE	canonical	2	6	junction_1	6.34428877022476	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAATAAATGAACGAATA	-129398059	True	NA	-40	True	AATACA	-45	NA	129399419	129382859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129384219_129393634_129393796_129396216_129396421_129397039_129397141_129399007
WTC11_00064849	chr3	-	2415	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	-21	0	21	multi-exon	FALSE	canonical	3	227	junction_5	35.0934612201214	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTGACAGCTCCACAC	-129434849	True	NA	NA	False	AATAAA	-41	NA	129439948	129430925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
WTC11_00064850	chr3	-	2494	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	-24	0	21	multi-exon	FALSE	canonical	3	99	junction_5	74.6532118586757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTGACAGCTCCACAC	-129434910	True	NA	NA	False	AATAAA	-41	NA	129440009	129430925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
WTC11_00064852	chr3	-	3400	7	NIC	ENSG00000129071.10	novel	2194	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	227	junction_4	37.1692824191637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATAAGATTCCTCTGGC	-129434936	True	NA	NA	False	AATAAA	-21	NA	129440035	129430951	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
WTC11_00064854	chr3	-	3468	6	NIC	ENSG00000129071.10	novel	2394	8	NA	NA	0	-11	intron_retention	FALSE	canonical	3	227	junction_3	33.1240094191509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAAAAAATACGGCTTT	-129434838	True	NA	-11	True	AATAAA	-18	NA	129439937	129431276	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
WTC11_00064860	chr3	-	1650	4	FSM	ENSG00000004399.13	ENST00000504524.5	1701	4	51	0	51	0	multi-exon	FALSE	canonical	3	55	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	-129558635	False	NA	-27	True	AATAAA	-20	NA	129558646	129555213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427
WTC11_00064862	chr3	-	1084	3	FSM	ENSG00000004399.13	ENST00000514990.1	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATGAAATATGATCTAT	-129571192	False	NA	-26	True	AATAAA	-4	NA	129571204	129569188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129569958_129570785_129570936_129571039
WTC11_00064863	chr3	-	654	4	FSM	ENSG00000004399.13	ENST00000504767.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	3.85861230093008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCTCAACAGCTCAGTCC	-129571711	False	NA	NA	False	NA	NA	NA	129571723	129570683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129570936_129571039_129571304_129571508_129571600_129571676
WTC11_00064864	chr3	-	507	4	FSM	ENSG00000004399.13	ENST00000505237.2	507	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	22.4845626053867	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCTGGGGGAGGCAA	NA	False	NA	NA	False	NA	NA	NA	129589527	129585951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129586049_129586171_129586273_129586587_129586720_129589350
WTC11_00064866	chr3	-	6316	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	-13	0	13	multi-exon	FALSE	canonical	0	0	junction_4	14.7356333046425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTTTGTTTTGCTTTT	-129893538	True	NA	1	True	AATAAA	-29	NA	129893711	129647778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
WTC11_00064870	chr3	-	1865	3	Fusion	ENSG00000203644.3_ENSG00000172765.18	novel	557	4	NA	NA	-30	1	multi-exon	FALSE	canonical	3	15	junction_1	10	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATTCTTTTTTCAAAA	-129893728	False	NA	2	True	AATAAA	-22	NA	129893741	129847046	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_129848413_129880308_129880560_129893493
WTC11_00064874	chr3	-	764	1	FSM	ENSG00000284095.1	ENST00000622932.2	375	1	-66	-323	45	323	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTCCCGGGCGGGGC	NA	False	NA	NA	False	GGGGCT	-9	NA	130869312	130868548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_130868500_130869300
WTC11_00064876	chr3	-	589	3	FSM	ENSG00000034533.12	ENST00000509060.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTGTGGAAGATCATAG	-131026327	False	NA	NA	False	NA	NA	NA	131026609	131025285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131025332_131025473_131025595_131026187
WTC11_00064877	chr3	-	3473	1	FSM	ENSG00000261167.1	ENST00000565095.1	3473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCAATCTTGCCTAAAG	-131458556	False	NA	53	True	AATACA	-17	NA	131458598	131455125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131455100_131458600
WTC11_00064878	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_6	101.852592589899	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-131476434	True	NA	-18	True	AATAAA	-14	NA	131502971	131462211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
WTC11_00064880	chr3	-	1459	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	-2	0	0	multi-exon	FALSE	canonical	3	10	junction_10	524.267689258074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTACCACATTAAATA	-131476446	True	NA	-47	True	ATTAAA	-10	NA	131502983	131462553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
WTC11_00064881	chr3	-	848	8	FSM	ENSG00000114686.9	ENST00000507669.5	848	8	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_7	443.028492196562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGAAACATATACAGGAC	-131476405	True	NA	NA	False	ACTAAA	-13	NA	131502942	131469731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502782
WTC11_00064883	chr3	-	813	4	FSM	ENSG00000114686.9	ENST00000510923.5	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	34.1857670188438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCTGGAACAAGTAAT	-131476430	True	NA	NA	False	NA	NA	NA	131502967	131497979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131502729
WTC11_00064884	chr3	-	3684	19	FSM	ENSG00000240303.8	ENST00000496418.5	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_13	34.4093010681705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	-132659611	False	NA	-6	True	ATTAAA	-22	NA	132659649	132558137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
WTC11_00064885	chr3	-	3234	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	-3	0	0	multi-exon	FALSE	canonical	3	102	junction_14	33.8830480008552	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	-132659113	True	NA	-6	True	ATTAAA	-22	NA	132659809	132558137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
WTC11_00064886	chr3	-	1188	6	FSM	ENSG00000240303.8	ENST00000487024.1	1188	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	18.768057970925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAAGGCAATAATCTTG	-132626384	True	NA	NA	False	AATGAA	-16	NA	132627074	132579178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690
WTC11_00064891	chr3	-	6125	28	FSM	ENSG00000163781.14	ENST00000642236.1	6152	28	439	-412	0	379	multi-exon	TRUE	canonical	3	50	junction_21	40.2485419650886	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTATTGCATTAGCCTT	-133657498	True	NA	0	True	ATTAAA	-18	NA	133661941	133599858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652615_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
WTC11_00064892	chr3	-	5761	28	FSM	ENSG00000163781.14	ENST00000260810.10	5761	28	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_21	30.1506960430317	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGGCCAGGCACGG	-133657498	True	NA	NA	False	NA	NA	NA	133661941	133600237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652630_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
WTC11_00064895	chr3	-	5589	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	3	4	3	-4	multi-exon	FALSE	canonical	3	17	junction_1	3.84919816723071	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCTTCTTGTCTGTGTT	-133895864	True	NA	NA	False	AATAAA	-19	NA	133895879	133824238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
WTC11_00064897	chr3	-	3397	15	FSM	ENSG00000163785.13	ENST00000623711.4	3049	15	0	-348	0	348	multi-exon	TRUE	canonical	3	251	junction_8	49.6228633940905	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTGTAGCAGTTGGAG	-134247720	True	NA	NA	False	NA	NA	NA	134250859	134156784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191975_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
WTC11_00064898	chr3	-	3058	15	NNC	ENSG00000163785.13	novel	3049	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	104.441688642661	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTATTGAAATTATTT	-134247720	True	NA	-11	True	ATTAAA	-18	NA	134250859	134157132	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191983_134195080_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
WTC11_00064900	chr3	-	2277	14	NNC	ENSG00000163785.13	novel	541	4	NA	NA	40	1349	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	103.123984664179	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCGGTGTATGAGTTT	-134247680	True	NA	1	True	NA	NA	NA	134250819	134174353	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_134174891_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191975_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
WTC11_00064905	chr3	-	4335	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	60.5373061186139	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-134368124	True	NA	-19	True	ATTAAA	-16	NA	134374447	134355876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
WTC11_00064906	chr3	-	3236	7	FSM	ENSG00000114019.15	ENST00000506326.1	3236	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	34.7738726952035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACATTTGGTTCATG	-134366828	False	NA	NA	False	TTTAAA	-28	NA	134366841	134356184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134357764_134358539_134358720_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282
WTC11_00064907	chr3	-	1286	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	-116	0	116	multi-exon	FALSE	canonical	3	305	junction_2	118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACATCCAGGCTGATTT	-134483645	True	NA	NA	False	NA	NA	NA	134485985	134477589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134478716_134482805_134482932_134485951
WTC11_00064908	chr3	-	1956	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	-116	0	116	multi-exon	FALSE	canonical	3	140	junction_2	200.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACATCCAGGCTGATTT	-134486006	False	NA	NA	False	NA	NA	NA	134486023	134477589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134478716_134482805_134482932_134485319
WTC11_00064910	chr3	-	1838	4	NNC	ENSG00000240086.7	novel	1868	4	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9.97775303139718	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTCTCTGTGTTTTCA	-135439151	True	NA	-3	True	AATAAA	-20	NA	135439835	135354789	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_135356322_135379261_135379428_135379780_135379848_135439762
WTC11_00064912	chr3	-	230	1	FSM	ENSG00000273455.1	ENST00000608883.1	439	1	152	57	152	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGTAAGCTCCTAAAAC	NA	False	NA	NA	False	TATAAA	-38	NA	136087761	136087531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136087500_136087800
WTC11_00064919	chr3	-	2174	1	FSM	ENSG00000273486.1	ENST00000609553.1	1684	1	-561	71	-561	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTATTTTCATCAGAGG	NA	False	NA	NA	False	NA	NA	NA	136839582	136837408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136837400_136839600
WTC11_00064920	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136842570_136846527_136846587_136861572
WTC11_00064922	chr3	-	1967	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	-24	0	0	multi-exon	FALSE	canonical	3	7	junction_2	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-136860058	True	NA	NA	False	NA	NA	NA	136862054	136841101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136842570_136846527_136846587_136861614
WTC11_00064932	chr3	-	2652	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	-659	0	0	multi-exon	FALSE	canonical	3	108	junction_16	35.3152877685148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-138589477	True	NA	-3	True	AATAAA	-23	NA	138594224	138494343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
WTC11_00064933	chr3	-	2643	18	FSM	ENSG00000114107.9	ENST00000264982.8	2636	18	0	-7	0	7	multi-exon	FALSE	canonical	3	91	junction_16	38.372694299724	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGTGATGCTTGTAT	-138589513	True	NA	4	True	AATAAA	-30	NA	138594260	138494336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
WTC11_00064935	chr3	-	1006	9	FSM	ENSG00000114107.9	ENST00000462419.5	1021	9	15	0	9	0	multi-exon	FALSE	canonical	3	32	junction_7	66.3414463212855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAACCTCCAAAAAGATT	-138594316	False	NA	NA	False	NA	NA	NA	138594330	138529228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
WTC11_00064945	chr3	-	2918	1	FSM	ENSG00000183770.7	ENST00000648323.1	2914	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGACTTCTTTATTTCTG	NA	False	NA	0	True	AATAAA	-21	NA	138947141	138944223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138944200_138947100
WTC11_00064946	chr3	-	6880	23	FSM	ENSG00000184432.11	ENST00000677073.1	6872	23	0	-8	0	8	multi-exon	FALSE	canonical	1	2	junction_21	257.907296433659	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTCTAATTTTTTGTAA	-139378114	True	NA	8	True	AATAAA	-24	NA	139389648	139353937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139379771_139379908_139383297_139383436_139389547
WTC11_00064947	chr3	-	6610	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	-8	0	8	multi-exon	FALSE	canonical	3	12	junction_14	199.041201764861	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTCTAATTTTTTGTAA	-139378123	True	NA	8	True	AATAAA	-24	NA	139389657	139353937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
WTC11_00064949	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_22	227.002603108823	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378136	True	NA	22	True	NA	NA	NA	139389670	139357405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
WTC11_00064950	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_21	65.0856404252825	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378113	True	NA	22	True	NA	NA	NA	139389647	139357405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
WTC11_00064951	chr3	-	3355	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	18	0	18	0	multi-exon	FALSE	canonical	3	780	junction_20	63.9660065972544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-16	True	ACTAAA	-18	NA	139389718	139357637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
WTC11_00064955	chr3	-	645	4	NNC	ENSG00000114115.10	novel	807	4	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	129.980340393803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTGGGGGAAGTTT	-139539324	False	NA	-4	True	AATAAA	-18	NA	139539344	139517437	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_139517681_139518420_139518523_139538780_139538960_139539223
WTC11_00064956	chr3	-	813	4	FSM	ENSG00000114115.10	ENST00000672186.1	807	4	0	-6	0	2	multi-exon	FALSE	canonical	3	262	junction_3	8.65383665716478	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGGAAGTTTCACTGC	-139539722	False	NA	2	True	AATAAA	-24	NA	139539742	139517431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
WTC11_00064958	chr3	-	667	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	21	0	-11	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677596	True	NA	-5	True	AATAAA	-19	NA	139677983	139634359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139634648_139637962_139638063_139677704
WTC11_00064960	chr3	-	9877	13	FSM	ENSG00000114126.18	ENST00000489671.6	9880	13	3	0	3	0	multi-exon	FALSE	canonical	3	50	junction_10	143.25043629951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTCTCATTACTAGTG	-142148135	True	NA	91	True	AATAAA	-14	NA	142149541	141944427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
WTC11_00064961	chr3	-	2322	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	38	0	-1	0	multi-exon	FALSE	canonical	3	99	junction_6	95.0789145920377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	-142024055	True	NA	-9	True	AAGAAA	-30	NA	142028627	141951501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
WTC11_00064962	chr3	-	1422	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	20	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	127.69755936065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	-142024054	True	NA	NA	False	AAGAAA	-6	NA	142028626	141952275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
WTC11_00064963	chr3	-	2289	11	NIC	ENSG00000114126.18	novel	2360	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	276	junction_6	54.2107922834559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	-142024025	True	NA	-9	True	AAGAAA	-30	NA	142028597	141951501	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
WTC11_00064965	chr3	-	1469	13	FSM	ENSG00000114126.18	ENST00000487734.5	1469	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	169.13560880745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	NA	False	NA	-27	True	AATAAA	-17	NA	142101757	141952495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142000251_142000355_142005440_142005545_142093060_142093128_142101734
WTC11_00064968	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	2.71947707391615	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	-142223867	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
WTC11_00064972	chr3	-	10079	41	FSM	ENSG00000114127.11	ENST00000392981.7	10079	41	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_19	6.38278935889318	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTTTGTTCTTTTAT	-142444888	True	NA	-2	True	ATTAAA	-19	NA	142448037	142306609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142311814_142312597_142312759_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332535_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
WTC11_00064976	chr3	-	8609	47	FSM	ENSG00000175054.16	ENST00000350721.9	8158	47	-133	-318	-133	90	multi-exon	FALSE	canonical	1	23	junction_12	18.7436819853179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAATATAAGCCAAGA	-142576476	True	NA	NA	False	AATAAA	-23	NA	142578866	142448916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142449603_142453127_142453234_142457603_142457756_142458957_142459112_142459226_142459384_142461939_142462091_142465096_142465241_142466323_142466534_142467933_142468069_142469336_142469570_142470085_142470184_142485139_142485283_142493131_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
WTC11_00064985	chr3	-	437	1	FSM	ENSG00000239797.1	ENST00000463605.1	483	1	52	-6	52	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACCTAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	145824687	145824250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_145824200_145824700
WTC11_00064986	chr3	-	3669	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	-4	0	0	multi-exon	FALSE	canonical	3	214	junction_6	29.6045959061331	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-146158958	True	NA	-4	True	AATAAA	-14	NA	146161167	146069439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
WTC11_00064987	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	71.4202187439199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-146158975	True	NA	-4	True	AATAAA	-14	NA	146161184	146069439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
WTC11_00064988	chr3	-	3228	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	5	0	-1	multi-exon	FALSE	canonical	3	8	junction_1	4.30116263352131	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACACTGTTTTATTTTT	-146250682	True	NA	NA	False	AATAAA	-18	NA	146251105	146192339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
WTC11_00064990	chr3	-	2096	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	-120	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	9.84171605971235	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-146539240	True	NA	-6	True	AATAAA	-18	NA	146544727	146515179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
WTC11_00064991	chr3	-	1458	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	-15	0	0	multi-exon	FALSE	canonical	3	32	junction_7	67.8019324268588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-146539250	True	NA	-20	True	AAAAAG	-40	NA	146544737	146515801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
WTC11_00064999	chr3	-	1261	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	-4	0	4	multi-exon	FALSE	canonical	3	223	junction_1	6.94422221866655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTGCACTAAATTATA	-146539240	True	NA	0	True	AATAAA	-19	NA	146544727	146527938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
WTC11_00065000	chr3	-	1864	1	FSM	ENSG00000241627.3	ENST00000461599.1	1801	1	-83	20	-83	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTGGGCTCCCAGCT	NA	False	NA	NA	False	NA	NA	NA	148987751	148985887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_148985900_148987800
WTC11_00065001	chr3	-	4469	26	NIC	ENSG00000071794.16	novel	5306	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_14	91.2767221146772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075590	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
WTC11_00065004	chr3	-	5306	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_13	75.4027956857186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075590	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
WTC11_00065009	chr3	-	3691	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	21	15	20	-15	multi-exon	FALSE	canonical	3	6	junction_5	7.2773621594641	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTAAAAAGCAATGGTC	NA	False	NA	NA	False	AATAAA	-3	NA	149333615	149318512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
WTC11_00065010	chr3	-	5045	7	FSM	ENSG00000018408.15	ENST00000360632.8	5037	7	0	-8	0	8	multi-exon	FALSE	canonical	3	58	junction_4	11.7992466802852	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTTTCATTATTTG	-149654679	True	NA	-15	True	AATAAA	-25	NA	149658025	149517226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149520990_149526012_149526126_149527835_149527970_149542334_149542538_149572863_149573001_149656875_149657310_149657764
WTC11_00065011	chr3	-	207	1	ISM	ENSG00000018408.15	ENST00000474080.1	2143	7	34638	265	1197	-265	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAACATATGCACAAATG	NA	False	NA	NA	False	NA	NA	NA	149702076	149701869	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_149701900_149702100
WTC11_00065012	chr3	-	4259	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	39	-604	0	604	multi-exon	FALSE	canonical	3	597	junction_1	19.1751792690447	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATTTGATTAAGT	-149745892	True	NA	NA	False	ATTAAA	-37	NA	149752450	149737867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
WTC11_00065013	chr3	-	885	6	FSM	ENSG00000114744.9	ENST00000491617.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	303.780447033709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAGGTCATAATCAGAA	-149745914	True	NA	NA	False	GATAAA	-32	NA	149752472	149741389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149741719_149750256_149750383_149750677_149750852_149751402_149751486_149752209_149752288_149752377
WTC11_00065014	chr3	-	632	5	FSM	ENSG00000114744.9	ENST00000483708.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	266.415441556979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAGAGATGAAGACAAA	-149745892	True	NA	NA	False	NA	NA	NA	149752450	149741574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149741719_149750677_149750852_149751322_149751486_149752209_149752288_149752377
WTC11_00065019	chr3	-	2261	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	0	104	0	multi-exon	FALSE	canonical	3	307	junction_1	371	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	-149971049	False	NA	-5	True	AATAAA	-16	NA	149971109	149964903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149966587_149968357_149968551_149970724
WTC11_00065031	chr3	-	719	3	FSM	ENSG00000174953.14	ENST00000495598.1	719	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGACTTGATGTTATA	-154277807	False	NA	NA	False	AGTAAA	-9	NA	154277835	154276028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154276357_154276746_154276900_154277597
WTC11_00065035	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	-154312193	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154315281_154316038_154316164_154324173
WTC11_00065037	chr3	-	4389	6	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_3	358.899428809799	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAACTGGCATTTAATG	-155266155	True	NA	4	True	AATAAA	-37	NA	155280507	155260365	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155263837_155265037_155265159_155267397_155267648_155268633_155268727_155278366_155278560_155280246
WTC11_00065038	chr3	-	702	3	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	452	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155278366_155278560_155280246
WTC11_00065039	chr3	-	819	4	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	181	junction_2	337.168932271182	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265155_155278366_155278560_155280246
WTC11_00065040	chr3	-	605	3	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	156	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266136	True	NA	-12	True	AATAAA	-21	NA	155280488	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265159_155280246
WTC11_00065041	chr3	-	823	4	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	345	junction_1	274.33677600108	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265159_155278366_155278560_155280246
WTC11_00065042	chr3	-	1063	5	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	386.522961801754	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266147	True	NA	-12	True	AATAAA	-21	NA	155280499	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265029_155265155_155267397_155267648_155278366_155278560_155280246
WTC11_00065045	chr3	-	6537	23	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	7	127	at_least_one_novel_splicesite	TRUE	non_canonical	3	19	junction_1	12.6245857472337	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTATGTCTCTGAGTG	-155742371	True	NA	NA	False	AATAGA	-29	NA	155745064	155479753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155483052_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586193_155593938_155594185_155596231_155596379_155704145_155704265_155744839
WTC11_00065046	chr3	-	6414	23	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	25	junction_1	11.916375287813	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGGTGAACTTTTTTT	-155742381	True	NA	-7	True	ATTAAA	-13	NA	155745074	155479883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155483049_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586193_155593938_155594185_155596231_155596379_155704145_155704265_155744839
WTC11_00065047	chr3	-	706	7	FSM	ENSG00000114805.18	ENST00000469040.1	748	7	0	42	0	-42	multi-exon	FALSE	canonical	3	40	junction_4	6.09416843292741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGGTAATCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	155504572	155490783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554
WTC11_00065051	chr3	-	334	1	FSM	ENSG00000242017.1	ENST00000482834.1	794	1	432	28	432	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCCTTTGGTTATGG	-156044452	False	NA	NA	False	NA	NA	NA	156044516	156044182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156044200_156044500
WTC11_00065053	chr3	-	4236	5	FSM	ENSG00000114850.7	ENST00000265044.7	4236	5	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_2	75.2641182769054	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCCCTGTTTGATTTCT	-156531870	True	NA	-4	True	AATATA	-16	NA	156555117	156539552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544307_156544440_156548904_156549004_156553654_156553782_156554956
WTC11_00065055	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	525.159499580842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-156531902	True	NA	NA	False	NA	NA	NA	156555149	156542820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
WTC11_00065056	chr3	-	1127	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	-137	-183	-113	0	multi-exon	FALSE	canonical	3	26	junction_1	520.651034763209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	156555262	156542820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
WTC11_00065059	chr3	-	1699	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	-54	-772	-22	0	multi-exon	FALSE	canonical	3	1143	junction_1	78.8712030253544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTGTCTATGGGTGG	-156531924	True	NA	NA	False	AATAGA	-21	NA	156555171	156543181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
WTC11_00065060	chr3	-	1957	1	FSM	ENSG00000174912.7	ENST00000481421.1	1045	1	-8	-904	-8	904	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTTAACAAATTGAGG	NA	False	NA	NA	False	AAGAAA	-17	NA	156714936	156712979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156713000_156714900
WTC11_00065062	chr3	-	388	1	FSM	ENSG00000230457.3	ENST00000473864.1	1182	1	753	41	753	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCAGTGGGGAAACATTA	NA	False	NA	NA	False	AAAAAG	-35	NA	156809979	156809591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156809600_156810000
WTC11_00065066	chr3	-	4800	6	FSM	ENSG00000163660.12	ENST00000474539.5	4799	6	0	-1	0	0	multi-exon	FALSE	canonical	3	194	junction_4	22.9294570367464	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATACCTTATTTA	-157146427	False	NA	-6	True	AATAAA	-25	NA	157153828	157147794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281
WTC11_00065067	chr3	-	3843	7	FSM	ENSG00000163660.12	ENST00000464316.5	3843	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	22.7919332708356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATACCTTATTTA	-157147265	False	NA	-6	True	AATAAA	-25	NA	157154666	157147794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176
WTC11_00065068	chr3	-	2458	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_6	94.5546211926677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATACCTTATTTA	NA	False	NA	-6	True	AATAAA	-25	NA	157160363	157147794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
WTC11_00065074	chr3	-	1136	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	11.2333209693305	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-157498689	True	NA	-2	True	AATGAA	-29	NA	157499539	157459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
WTC11_00065075	chr3	-	552	3	FSM	ENSG00000197415.12	ENST00000483440.1	556	3	0	4	0	-4	multi-exon	FALSE	canonical	2	4	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTGGTAAGTGTTC	-157498705	True	NA	NA	False	NA	NA	NA	157499555	157489064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157489161_157495211_157495507_157499394
WTC11_00065078	chr3	-	4052	19	FSM	ENSG00000068885.15	ENST00000483465.5	4044	19	0	-8	0	2	multi-exon	FALSE	canonical	3	41	junction_18	21.1167390159245	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATATCCTAGAATTCA	NA	False	NA	0	True	AATAAA	-35	NA	160383656	160256983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436
WTC11_00065079	chr3	-	4014	20	NNC	ENSG00000068885.15	novel	3999	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	27.5762353025681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAATTCTCTCATATCC	-160398028	True	NA	-9	True	AATAAA	-26	NA	160399247	160256992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381723_160384561_160384647_160399145
WTC11_00065080	chr3	-	4215	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	52	-1194	0	0	multi-exon	FALSE	canonical	3	19	junction_19	26.4988679003462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-160398002	True	NA	-2	True	AATAAA	-33	NA	160399221	160256985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
WTC11_00065086	chr3	-	6275	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	26	-2477	0	-581	multi-exon	FALSE	canonical	3	41	junction_1	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAATGATTAAGAAAATC	-160444704	True	NA	NA	False	NA	NA	NA	160449760	160433025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160439187_160448725_160448796_160449716
WTC11_00065087	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	-160449581	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160439187_160448725_160448796_160449444
WTC11_00065088	chr3	-	8970	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	-18	0	18	multi-exon	FALSE	canonical	3	267	junction_12	21.5876664730119	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTGTAGTGACTACCTC	-160563591	True	NA	2	True	AATAAA	-34	NA	160565571	160494988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
WTC11_00065089	chr3	-	1143	3	FSM	ENSG00000186432.10	ENST00000678734.1	1309	3	116	50	116	-50	multi-exon	FALSE	canonical	3	271	junction_2	24.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGACAGAGCAAGACCC	-160521890	False	NA	NA	False	NA	NA	NA	160521910	160513299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160514182_160515451_160515581_160521778
WTC11_00065090	chr3	-	275	1	FSM	ENSG00000238741.1	ENST00000458797.1	330	1	0	55	0	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCACCCTAAAATCTCTAA	-160515051	True	NA	NA	False	NA	NA	NA	160515236	160514961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160515000_160515200
WTC11_00065091	chr3	-	3298	4	FSM	ENSG00000169255.15	ENST00000652309.1	1116	4	-78	-2104	11	4	multi-exon	FALSE	canonical	3	38	junction_1	7.03957069398096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTTTATAATTAGAG	-161104019	False	NA	-14	True	AATAAA	-18	NA	161104538	161083896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318
WTC11_00065092	chr3	-	3289	5	FSM	ENSG00000169255.15	ENST00000320474.10	3295	5	0	6	0	-6	multi-exon	FALSE	canonical	3	38	junction_1	6.37867541108654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTAGAGTGTTCTAT	-161104830	True	NA	-6	True	AATAAA	-26	NA	161105349	161083888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105234
WTC11_00065094	chr3	-	3452	5	FSM	ENSG00000169255.15	ENST00000488170.5	1660	5	47	-1839	-3	0	multi-exon	FALSE	canonical	3	16	junction_4	14.8744747806435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGACACCGGTTTGT	-161104574	False	NA	-37	True	NA	NA	NA	161105093	161083919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784
WTC11_00065099	chr3	-	3099	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-5	0	2	multi-exon	FALSE	canonical	0	0	junction_1	51.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTCCAGATTTACTTT	-161372835	True	NA	NA	False	AATAAA	-21	NA	161372880	161344795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161346356_161359801_161359895_161371434
WTC11_00065101	chr3	-	538	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	-67	0	67	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATATGTTCAAGTTAGA	-161429557	True	NA	1	True	CATAAA	-11	NA	161429597	161429059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161429100_161429600
WTC11_00065103	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	471.3283754454	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	-167734896	False	NA	-10	True	AATAAA	-15	NA	167734939	167683909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
WTC11_00065104	chr3	-	1278	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	-2	0	0	multi-exon	FALSE	canonical	3	1176	junction_7	124.925120429342	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	-167734887	False	NA	-10	True	AATAAA	-15	NA	167734930	167683909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
WTC11_00065115	chr3	-	1086	1	Genic_Genomic	ENSG00000173905.9	novel	NA	NA	NA	NA	35111	4	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTTAAACTATGTG	-168009754	False	NA	-16	True	AATAAA	-19	NA	168009770	168008684	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_168008700_168009800
WTC11_00065116	chr3	-	2479	6	ISM	ENSG00000173905.9	ENST00000470487.6	4310	16	66385	-4	15342	4	3prime_fragment	FALSE	canonical	2	2	junction_4	4.47213595499958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTTAAACTATGTG	-168029515	False	NA	-16	True	AATAAA	-19	NA	168029539	168008684	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222
WTC11_00065117	chr3	-	5459	15	FSM	ENSG00000085276.19	ENST00000464456.5	5732	15	274	-1	274	1	multi-exon	FALSE	canonical	1	1	junction_14	6.02206825953085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCCCCACTGTGTGG	-169147431	True	NA	-8	True	AATAAA	-17	NA	169147460	169083505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169085044_169088999_169089184_169089999_169090237_169092957_169093103_169095075_169095246_169100884_169100963_169102059_169102227_169112786_169112875_169115382_169116740_169121055_169121210_169122579_169122728_169127843_169128061_169131428_169131532_169143697_169143833_169146722
WTC11_00065119	chr3	-	5453	17	FSM	ENSG00000085276.19	ENST00000651503.2	5462	17	9	0	9	0	multi-exon	FALSE	canonical	1	5	junction_7	5.73605646328556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTCCCCACTGTGTG	-169663056	True	NA	-9	True	AATAAA	-16	NA	169663703	169083506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169085044_169088999_169089184_169089999_169090237_169092957_169093103_169095075_169095246_169100884_169100963_169102059_169102227_169107925_169107953_169112786_169112875_169115382_169116740_169121055_169121210_169122579_169122728_169127843_169128061_169131428_169131532_169143697_169143833_169381186_169381525_169663335
WTC11_00065120	chr3	-	824	1	FSM	ENSG00000213178.3	ENST00000418623.1	410	1	59	-473	59	473	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATAAAACAATGGTT	NA	False	NA	NA	False	AATAAA	-38	NA	169484021	169483197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169483200_169484000
WTC11_00065122	chr3	-	3100	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	-85	-1344	-85	1344	multi-exon	FALSE	canonical	3	29	junction_1	0	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATCCTCTGCTCAAG	-169769401	True	NA	NA	False	NA	NA	NA	169769646	169765576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169768351_169769320
WTC11_00065128	chr3	-	5030	15	FSM	ENSG00000173889.16	ENST00000494943.5	5030	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	11.1833057067493	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTATAATGAGTTTT	-170179440	True	NA	-10	True	ATTAAA	-17	NA	170181733	170095220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181686
WTC11_00065134	chr3	-	1915	4	FSM	ENSG00000163584.18	ENST00000295830.13	1902	4	0	-13	0	13	multi-exon	TRUE	canonical	3	629	junction_3	182.76821994598	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTATAGAACAGGGAAG	-170861611	True	NA	NA	False	AATAAA	-38	NA	170870195	170864861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170870158
WTC11_00065136	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	473.360562597078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	-170861624	True	NA	-16	True	AATAAA	-16	NA	170870208	170866266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
WTC11_00065138	chr3	-	5530	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	4	0	-4	multi-exon	FALSE	canonical	3	79	junction_4	11.5542200082913	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTATTCTTGTACATAT	-170907750	True	NA	NA	False	AATAAA	-15	NA	170908637	170888421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
WTC11_00065141	chr3	-	9893	32	FSM	ENSG00000154310.17	ENST00000357327.9	3996	32	-430	-5467	-85	0	multi-exon	TRUE	canonical	3	52	junction_13	31.5591379531424	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTCCTTGTTCCTCA	-171458052	True	NA	NA	False	AATAAA	-13	NA	171460493	171058413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
WTC11_00065143	chr3	-	4727	31	FSM	ENSG00000154310.17	ENST00000341852.10	4727	31	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	38.667370683246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCACCAACCCAAAAGGT	-171457967	True	NA	31	True	NA	NA	NA	171460408	171063329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
WTC11_00065149	chr3	-	811	5	FSM	ENSG00000154310.17	ENST00000484051.5	1180	5	288	81	288	15	multi-exon	FALSE	canonical	3	146	junction_4	13.6450540489952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAAGACTTGCTTTGTC	-171082363	False	NA	NA	False	NA	NA	NA	171082394	171066454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250
WTC11_00065153	chr3	-	258	1	FSM	ENSG00000236686.1	ENST00000454901.1	1240	1	1194	-212	1194	212	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGATTTGAATCTAATG	NA	False	NA	NA	False	NA	NA	NA	172425895	172425637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172425600_172425900
WTC11_00065154	chr3	-	4559	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	0	-23	0	23	multi-exon	FALSE	canonical	3	22	junction_3	5.49431524395898	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACCAGAGGAATTTATAA	-172710661	True	NA	NA	False	AATAAA	-41	NA	172711067	172630225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
WTC11_00065156	chr3	-	441	1	FSM	ENSG00000227440.1	ENST00000430660.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGCTCCATGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	172829176	172828735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172828700_172829200
WTC11_00065157	chr3	-	395	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	-5	50	-5	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATATGAAACTCC	NA	False	NA	NA	False	NA	NA	NA	175718675	175718280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_175718300_175718700
WTC11_00065158	chr3	-	2331	3	NNC	ENSG00000288895.1	novel	854	3	NA	NA	-165	34	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	233	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACACTTTGTGTGTTT	-176327210	True	NA	33	True	NA	NA	NA	176327233	176321620	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176322019_176324812_176325001_176325488
WTC11_00065162	chr3	-	6482	17	NNC	ENSG00000177565.18	novel	2535	17	NA	NA	0	1919	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.6889920266939	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCCAAGCCACTTTCT	-177194249	True	NA	NA	False	NA	NA	NA	177197163	177017420	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_177017451_177020754_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
WTC11_00065164	chr3	-	8305	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	-350	-7	335	-4	multi-exon	FALSE	canonical	3	42	junction_15	58.0861429258304	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAATGTTTCTTGGTT	-177196804	False	NA	-3	True	ATTAAA	-31	NA	177196828	177019347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
WTC11_00065165	chr3	-	7845	15	FSM	ENSG00000177565.18	ENST00000352800.10	2454	15	27	-5418	0	-4	multi-exon	FALSE	canonical	3	50	junction_14	52.9264506997538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAATGTTTCTTGGTT	-177194311	True	NA	-3	True	ATTAAA	-31	NA	177197225	177019347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177197120
WTC11_00065166	chr3	-	8178	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	4	0	-4	multi-exon	FALSE	canonical	3	102	junction_15	46.5403051128804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAATGTTTCTTGGTT	-177197160	True	NA	-3	True	ATTAAA	-31	NA	177197482	177019347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
WTC11_00065167	chr3	-	2535	17	FSM	ENSG00000177565.18	ENST00000422442.6	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	77.9350691280889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATGTTGTGGAAGGG	-177194313	True	NA	-124	True	NA	NA	NA	177197227	177024854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177098465_177098542_177197120
WTC11_00065174	chr3	-	409	2	FSM	ENSG00000237978.6	ENST00000421498.1	393	2	2	-18	2	18	multi-exon	FALSE	canonical	2	8	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAACTGGAATCTTTGT	NA	False	NA	-12	True	AATAAA	-39	NA	178801934	178748969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_178749237_178801792
WTC11_00065175	chr3	-	570	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-49	25	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859350	True	NA	-5	True	NA	NA	NA	178860454	178748962	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_178749237_178859488_178859624_178860293
WTC11_00065176	chr3	-	9316	6	FSM	ENSG00000172667.11	ENST00000311417.7	8936	6	-380	0	26	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77752524926425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-179072176	False	NA	0	True	AATAAA	-26	NA	179072189	179017222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179025229_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
WTC11_00065177	chr3	-	2918	7	FSM	ENSG00000172667.11	ENST00000432729.5	2944	7	26	0	26	0	multi-exon	FALSE	canonical	3	7	junction_5	11.2607972877392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-179072176	False	NA	NA	False	NA	NA	NA	179072189	179023738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071326_179071448_179071594
WTC11_00065178	chr3	-	726	4	FSM	ENSG00000172667.11	ENST00000414084.1	743	4	17	0	17	0	multi-exon	FALSE	canonical	3	7	junction_3	13.0213499897497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGTGATGCCTCCT	-179071536	False	NA	NA	False	NA	NA	NA	179071549	179027756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179027813_179030879_179031000_179067482_179067810_179071326
WTC11_00065180	chr3	-	2482	1	FSM	ENSG00000240429.1	ENST00000498774.1	2246	1	-172	-64	-172	64	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCACTGCCAATGTAA	-179260989	True	NA	NA	False	GGGGCT	-5	NA	179261445	179258963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179259000_179261400
WTC11_00065181	chr3	-	6315	10	FSM	ENSG00000114450.11	ENST00000232564.8	6315	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	9.63532595052391	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTATTTTTTTATG	-179447517	True	NA	-3	True	AATAAA	-16	NA	179451470	179396087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426243_179451345
WTC11_00065183	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_1	111.897894926084	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-179598410	True	NA	24	True	AATAAA	-40	NA	179604638	179588284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
WTC11_00065184	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	400.669301156064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-179598412	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
WTC11_00065186	chr3	-	1581	5	FSM	ENSG00000284862.3	ENST00000652010.1	3799	5	2234	-16	2234	0	multi-exon	FALSE	canonical	2	4	junction_4	2.34520787991171	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATGTACATGTGTCTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	180619365	180614007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180615078_180616280_180616364_180616515_180616696_180616825_180616967_180619258
WTC11_00065188	chr3	-	1617	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	-848	0	267	multi-exon	FALSE	canonical	3	79	junction_4	608.623652185815	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTCGTTTAAAATCTGA	-180967036	True	NA	NA	False	AGTAAA	-32	NA	180989710	180983429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
WTC11_00065190	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	587.577813995729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	-180967029	True	NA	-66	True	NA	NA	NA	180989703	180983772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
WTC11_00065191	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	549.729606261115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-180967095	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
WTC11_00065192	chr3	-	1551	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	-149	-792	0	0	multi-exon	FALSE	canonical	3	181	junction_5	519.270103125531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	-180966993	True	NA	-66	True	NA	NA	NA	180989667	180983772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
WTC11_00065203	chr3	-	269	3	FSM	ENSG00000053524.13	ENST00000475664.1	460	3	0	191	0	-191	multi-exon	FALSE	canonical	3	16	junction_2	1.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGGTGCAGGGGGCGAGG	NA	False	NA	NA	False	NA	NA	NA	183295366	183276856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183276958_183289119_183289221_183295299
WTC11_00065205	chr3	-	1257	10	NNC	ENSG00000175193.14	novel	1501	10	NA	NA	0	39745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	427.415170993101	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTCGAATGAATCTGAA	-183873978	True	NA	NA	False	NA	NA	NA	183884879	183789525	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_183789555_183829392_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065207	chr3	-	2060	3	FSM	ENSG00000180834.8	ENST00000445426.1	549	3	-56	-1455	0	0	multi-exon	FALSE	canonical	2	8	junction_2	26	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTTCAGTTTCTTAAA	-183824849	True	NA	-8	True	ATTAAA	-37	NA	183825577	183815921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183817437_183817993_183818108_183825146
WTC11_00065208	chr3	-	1114	3	FSM	ENSG00000180834.8	ENST00000431348.1	890	3	-224	0	-224	0	multi-exon	TRUE	canonical	2	6	junction_1	34	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGTTGGGAACCGAATT	-183825798	False	NA	NA	False	NA	NA	NA	183825818	183817061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183817386_183817993_183818112_183825146
WTC11_00065209	chr3	-	1385	10	FSM	ENSG00000175193.14	ENST00000317096.9	1501	10	0	116	0	-2	multi-exon	FALSE	canonical	3	852	junction_4	146.541950341452	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTTCTCTCTTT	-183873979	True	NA	-2	True	AATAAA	-24	NA	183884880	183829386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065210	chr3	-	1522	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	10	2	-9	-2	multi-exon	FALSE	canonical	2	34	junction_6	425.031104744112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTTCTCTCTTT	-183873996	True	NA	-2	True	AATAAA	-24	NA	183884897	183829386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065211	chr3	-	546	4	FSM	ENSG00000175193.14	ENST00000418450.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	396.099594658829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	NA	False	NA	-5	True	AATAAA	-21	NA	183842354	183829389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183842297
WTC11_00065214	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	301.323512814715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-183873987	True	NA	-5	True	AATAAA	-21	NA	183884888	183829389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065215	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	451.041289571098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	-183873954	True	NA	-12	True	AATAAA	-14	NA	183884855	183829396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065216	chr3	-	1550	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	-5	0	0	multi-exon	FALSE	canonical	2	4	junction_7	433.807561022166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	-183873978	True	NA	-12	True	AATAAA	-14	NA	183884879	183829396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00065223	chr3	-	4697	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	21.2529409729571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014580	True	NA	-22	True	AATAAA	-17	NA	184017863	183983752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
WTC11_00065224	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	78.4382559724526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
WTC11_00065227	chr3	-	896	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	-13	0	13	multi-exon	FALSE	canonical	3	17	junction_1	82.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATATTTCTCTCCTTT	-184014656	True	NA	NA	False	ATTAAA	-31	NA	184017939	184000649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184001252_184014263_184014448_184017829
WTC11_00065229	chr3	-	1523	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	29	0	-29	multi-exon	FALSE	canonical	0	0	junction_2	252.195856429086	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGAGGCACTTTATTG	-184243376	True	NA	-2	True	GATAAA	-17	NA	184248962	184242329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
WTC11_00065231	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	324.015600511765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184249202	True	NA	-3	True	AATAAA	-14	NA	184249548	184242424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
WTC11_00065233	chr3	-	1707	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_2	329.081083283436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGCCCTTCCAAATAA	-184249174	True	NA	-37	True	NA	NA	NA	184249520	184242458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
WTC11_00065235	chr3	-	904	6	FSM	ENSG00000214160.10	ENST00000423996.5	904	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	207.44290780839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAAAGGCAGTAGTGC	-184243363	True	NA	NA	False	NA	NA	NA	184248949	184243790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
WTC11_00065244	chr3	-	1357	6	FSM	ENSG00000090534.20	ENST00000445696.6	1505	6	30	118	30	-60	multi-exon	FALSE	canonical	1	1	junction_1	2.0591260281974	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACACAGGACTGAAAAGGG	-184378036	False	NA	NA	False	NA	NA	NA	184378110	184372386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184373167_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
WTC11_00065245	chr3	-	2168	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	-467	0	467	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACAGCTACTCCTCAGT	-184702950	True	NA	NA	False	AATAAA	-14	NA	184712064	184709896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184709900_184712100
WTC11_00065246	chr3	-	6464	2	FSM	ENSG00000187068.3	ENST00000335012.3	7159	2	0	695	0	-695	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTCATTATCAGTAATAA	-185153001	True	NA	NA	False	NA	NA	NA	185153060	185077532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185083564_185152627
WTC11_00065249	chr3	-	240	1	FSM	ENSG00000229704.1	ENST00000447161.1	982	1	267	475	267	-475	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGACTACACATAAGAGGA	-185245876	False	NA	NA	False	NA	NA	NA	185246174	185245934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185245900_185246200
WTC11_00065250	chr3	-	1401	2	Genic_Genomic	ENSG00000229638.1	novel	1284	1	NA	NA	0	9626	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAAAATTCTACAAGGAA	-185418696	False	NA	NA	False	NA	NA	NA	185418778	185407868	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_185407894_185417402
WTC11_00065253	chr3	-	2811	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	-6	0	6	multi-exon	FALSE	canonical	3	59	junction_3	11.6699400169838	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGTTTGAACATGTTG	-185498087	True	NA	-1	True	AATAAA	-22	NA	185499035	185489594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
WTC11_00065254	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_6	101.223097934985	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-185810382	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
WTC11_00065255	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	142.746385636362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-185810364	True	NA	20	True	TTTAAA	-10	NA	185825024	185643974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
WTC11_00065260	chr3	-	4141	8	FSM	ENSG00000136527.19	ENST00000492417.5	4141	8	0	0	0	0	multi-exon	TRUE	canonical	3	1075	junction_5	76.9524104196077	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGCAGCTGTTCACA	-185929059	False	NA	-23	True	AATAAA	-19	NA	185929073	185916743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600
WTC11_00065263	chr3	-	4485	10	FSM	ENSG00000136527.19	ENST00000487615.5	4485	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	495.128266209878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCTTTCTAACATATC	-185937406	False	34736	-36	True	AATAAA	-14	NA	185937420	185917328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185934428
WTC11_00065264	chr3	-	1699	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	-2	0	0	multi-exon	FALSE	canonical	3	71	junction_8	482.057396306014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTTTCTAACATATCA	-185903293	True	NA	-35	True	AATAAA	-15	NA	185938029	185917327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
WTC11_00065267	chr3	-	4819	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	8	-745	0	745	multi-exon	FALSE	canonical	3	179	junction_7	27.0907682102635	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAAATAAAGTAGAGCC	-186102207	True	NA	-55	True	NA	NA	NA	186109081	186045568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
WTC11_00065271	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	81.8984737342522	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186102207	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
WTC11_00065279	chr3	-	1385	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	-20	0	0	multi-exon	FALSE	canonical	3	496	junction_10	118.059349481521	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAACATTCAAACTT	-186796334	True	NA	-43	True	AATAAA	-40	NA	186806482	186789879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
WTC11_00065284	chr3	-	730	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	-1	0	1	multi-exon	FALSE	canonical	3	411	junction_2	102	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGTCATCTTTAAAAA	-187134051	True	NA	-1	True	AATAAA	-27	NA	187139496	187120946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187121329_187127998_187128063_187139212
WTC11_00065285	chr3	-	750	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	-1	0	1	multi-exon	FALSE	canonical	3	203	junction_2	234.623575589117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGTCATCTTTAAAAA	-187180854	False	NA	-1	True	AATAAA	-27	NA	187180908	187120946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
WTC11_00065286	chr3	-	1062	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	6	-19890	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	282.290076871292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATGAATTCGTCAAAA	-187180848	False	NA	62	True	AATAAA	-25	NA	187180902	187140837	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
WTC11_00065287	chr3	-	5913	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-1119	-54598	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGCCTGTTTGGTGGT	-187181973	False	54	-7	True	AATAAA	-16	NA	187182027	187175545	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187181400_187181968
WTC11_00065288	chr3	-	5329	2	FSM	ENSG00000127241.18	ENST00000480349.1	5982	2	649	4	649	-2	multi-exon	TRUE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTTGGCTTATGGGT	NA	False	NA	-4	True	AATAAA	-16	NA	187244327	187234085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187236568_187241480
WTC11_00065290	chr3	-	3307	10	FSM	ENSG00000113916.18	ENST00000406870.7	3306	10	0	-1	0	1	multi-exon	FALSE	canonical	2	11	junction_4	5.97112393001973	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGGTCTGGAGGGCTT	-187744901	True	NA	-3	True	AATAAA	-18	NA	187745468	187721379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187722602_187724940_187725079_187725498_187725630_187726730_187726899_187728359_187728545_187729049_187730022_187731708_187731931_187733532_187733704_187734868_187734908_187745409
WTC11_00065291	chr3	-	1972	1	FSM	ENSG00000270959.1	ENST00000605573.1	2852	1	-59	939	-59	-939	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGAGCTCGAGCCAGC	-188154055	True	NA	NA	False	NA	NA	NA	188154116	188152144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_188152100_188154100
WTC11_00065294	chr3	-	208	2	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTTTCAAAGGTGTCA	-191671794	False	NA	NA	False	NA	NA	NA	191671869	191671534	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_191671653_191671779
WTC11_00065298	chr3	-	7448	33	FSM	ENSG00000133657.17	ENST00000645538.1	7451	33	0	3	0	0	multi-exon	TRUE	canonical	3	76	junction_28	21.4344932293721	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTTTTTTTCTGTGTC	-194484258	True	NA	NA	False	AATAAA	-18	NA	194487002	194402676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194406117_194413758_194413840_194419878_194419968_194425341_194425530_194427074_194427253_194428844_194428918_194429677_194429775_194430071_194430182_194430272_194430316_194430942_194431023_194431103_194431227_194431716_194431893_194433771_194433897_194437094_194437216_194437310_194437465_194437555_194437574_194438855_194438973_194441310_194441462_194444724_194444787_194446926_194447116_194447851_194448010_194448456_194448637_194450144_194450277_194453705_194453779_194454257_194454393_194455892_194455963_194457093_194457175_194459470_194459542_194459788_194459972_194460657_194460832_194462139_194462237_194485793_194485836_194486565
WTC11_00065300	chr3	-	2481	5	FSM	ENSG00000145014.18	ENST00000477651.5	1899	5	-579	-3	-579	0	multi-exon	FALSE	canonical	3	33	junction_4	8.16624148553054	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGTGGAGTGCAATG	NA	False	NA	-4	True	AATAAA	-20	NA	194618224	194587677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194588640_194604286_194604446_194610915_194611021_194615568_194615698_194617098
WTC11_00065303	chr3	-	1196	1	FSM	ENSG00000272707.1	ENST00000609789.1	160	1	-1049	13	-1049	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCAAGGATGAGGT	-194638698	False	NA	-16	True	TTTAAA	-38	NA	194638713	194637517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194637500_194638700
WTC11_00065304	chr3	-	3289	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_4	73.7092480930166	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTATTTCTGGTTTT	-194661730	True	NA	-8	True	ATTAAA	-24	NA	194672191	194640784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
WTC11_00065310	chr3	-	2738	4	FSM	ENSG00000173950.16	ENST00000310380.11	2714	4	0	-24	0	24	multi-exon	FALSE	canonical	3	109	junction_2	6.18241233033047	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATCACAGTTTCAGCTG	-195270042	True	NA	-9	True	AATAAA	-38	NA	195271159	195068259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195270554
WTC11_00065312	chr3	-	7296	25	NIC	ENSG00000114331.16	novel	7093	23	NA	NA	-47	6	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	46.4304849269912	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGATTTACATTTTC	-195443071	False	NA	-2	True	AATAAA	-25	NA	195443091	195274738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295195_195295301_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195312946_195312968_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
WTC11_00065322	chr3	-	1619	2	FSM	ENSG00000184203.8	ENST00000462906.1	1668	2	26	23	-7	-23	multi-exon	FALSE	canonical	3	297	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTCTACAAAAAAAAAAAAA	-195538697	True	NA	NA	False	NA	NA	NA	195543360	195528739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195529902_195542903
WTC11_00065323	chr3	-	946	1	NIC	ENSG00000061938.21	novel	2850	7	NA	NA	5381	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	-195864298	False	NA	-4	True	AATAAA	-22	NA	195864309	195863363	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195863400_195864300
WTC11_00065324	chr3	-	4238	15	FSM	ENSG00000061938.21	ENST00000673420.1	4238	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	12.290904219406	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	-195908742	False	NA	-4	True	AATAAA	-22	NA	195908764	195863363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
WTC11_00065325	chr3	-	4663	15	FSM	ENSG00000061938.21	ENST00000333602.14	5270	15	607	0	-248	0	multi-exon	FALSE	canonical	1	1	junction_14	13.1181833610404	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	-195909173	False	NA	-4	True	AATAAA	-22	NA	195909195	195863363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195864188_195866888_195867017_195867168_195867259_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
WTC11_00065326	chr3	-	2693	15	NIC	ENSG00000185485.14	novel	2491	17	NA	NA	12	428	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	42.3597927381181	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGATGCAAATATATATT	-195986015	True	NA	NA	False	NA	NA	NA	195990293	195959319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195960087_195963299_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
WTC11_00065328	chr3	-	2123	14	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	37.6338636377889	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTATTTCCAAATCC	-195986015	True	NA	-14	True	AATAAA	-17	NA	195990293	195963102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
WTC11_00065333	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	107.07129856212	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070612	True	NA	-2	True	AATAAA	-16	NA	196082094	196049283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
WTC11_00065334	chr3	-	5280	19	FSM	ENSG00000072274.13	ENST00000392396.7	5032	19	-56	-192	-50	0	multi-exon	FALSE	canonical	3	18	junction_18	102.780240210742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070664	True	NA	-2	True	AATAAA	-16	NA	196082146	196049283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196081830
WTC11_00065337	chr3	-	216	2	FSM	ENSG00000072274.13	ENST00000482479.1	540	2	324	0	324	0	multi-exon	FALSE	canonical	3	419	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAATGGGAATGCCTG	-196058619	False	NA	NA	False	NA	NA	NA	196058634	196058210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196058366_196058573
WTC11_00065340	chr3	-	5577	9	NIC	ENSG00000161217.12	novel	5546	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_8	22.155346420221	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284593	True	NA	-2	True	AATAAA	-21	NA	196287674	196234367	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
WTC11_00065342	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	38.2186690854963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284632	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
WTC11_00065344	chr3	-	798	5	FSM	ENSG00000161217.12	ENST00000430755.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	7.79021822544144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTCTTCTTCGGT	NA	False	NA	3	True	AATAAA	-22	NA	196257806	196241659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787
WTC11_00065347	chr3	-	625	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.759057631302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315780	True	NA	0	True	AATAAA	-25	NA	196318240	196291218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
WTC11_00065348	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	101.993872364961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315754	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
WTC11_00065349	chr3	-	561	4	NIC	ENSG00000213123.11	novel	625	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	118.643256117751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTGTTGTGTTTTAGG	-196315780	True	NA	-4	True	AATAAA	-21	NA	196318240	196291222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318035
WTC11_00065350	chr3	-	650	4	NIC	ENSG00000213123.11	novel	800	6	NA	NA	-34	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	129.631100520755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTGTTGTGTTTTAGG	-196315873	True	NA	-4	True	AATAAA	-21	NA	196318333	196291222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318039
WTC11_00065353	chr3	-	1841	3	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	15420	-26	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAATAAAATACTAAAAA	-196488239	False	NA	-42	True	NA	NA	NA	196488257	196468808	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196470231_196470534_196470918_196488221
WTC11_00065357	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.6495285928003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567622	True	NA	-5	True	AATAAA	-25	NA	196568554	196554176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
WTC11_00065360	chr3	-	2906	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	-690	0	686	multi-exon	FALSE	canonical	3	21	junction_3	412.17067662155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAAAGGCATTTAGTT	-196942365	False	NA	NA	False	NA	NA	NA	196942377	196934715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
WTC11_00065361	chr3	-	2791	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	-690	0	686	multi-exon	FALSE	canonical	3	866	junction_2	22.8619042659763	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAAAGGCATTTAGTT	-196932659	True	NA	NA	False	NA	NA	NA	196942528	196934715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
WTC11_00065362	chr3	-	4166	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	-5	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGCCTGTTTCCTGGC	-196932691	True	NA	-4	True	AATAAA	-20	NA	196942560	196935401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196939433_196942425
WTC11_00065364	chr3	-	2413	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	63	-1343	0	0	multi-exon	FALSE	canonical	3	78	junction_3	385.344867186092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-196942365	False	NA	7	True	NA	NA	NA	196942377	196935433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
WTC11_00065371	chr3	-	4936	26	NIC	ENSG00000075711.21	novel	5034	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	76.3327871887304	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	-197297685	False	NA	1	True	ATTAAA	-25	NA	197297733	197042559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
WTC11_00065372	chr3	-	5034	26	FSM	ENSG00000075711.21	ENST00000346964.6	5034	26	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_25	74.1333932853475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	-197298528	False	NA	1	True	ATTAAA	-25	NA	197298576	197042559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
WTC11_00065373	chr3	-	4858	25	FSM	ENSG00000075711.21	ENST00000667157.1	4853	25	-11	6	0	-6	multi-exon	FALSE	canonical	3	40	junction_24	60.2305754764324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATGTCCTTGTTAAGT	-197296984	True	NA	-5	True	ATTAAA	-19	NA	197298623	197042565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
WTC11_00065374	chr3	-	4840	25	FSM	ENSG00000075711.21	ENST00000655488.1	4840	25	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_24	80.5079253345077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATATATTAAAATTT	-197296948	True	NA	-39	True	TATAAA	-7	NA	197298587	197042599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
WTC11_00065377	chr3	-	4698	25	FSM	ENSG00000075711.21	ENST00000670455.1	4693	25	0	-5	0	0	multi-exon	FALSE	canonical	3	93	junction_24	53.5430609416384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-197297795	False	NA	-17	True	AATAAA	-7	NA	197297843	197042937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
WTC11_00065378	chr3	-	4513	25	FSM	ENSG00000075711.21	ENST00000671185.1	4513	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	82.6044372631129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-197297805	False	NA	-17	True	AATAAA	-7	NA	197297853	197042937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
WTC11_00065379	chr3	-	4579	25	FSM	ENSG00000075711.21	ENST00000669565.1	4574	25	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_24	65.9583201726666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-197297805	False	NA	-17	True	AATAAA	-7	NA	197297853	197042937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
WTC11_00065380	chr3	-	4660	25	FSM	ENSG00000075711.21	ENST00000661453.1	4653	25	0	-7	0	0	multi-exon	FALSE	canonical	3	40	junction_8	73.6509103624811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	-197297823	False	NA	-17	True	AATAAA	-7	NA	197297871	197042937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
WTC11_00065382	chr3	-	4649	26	FSM	ENSG00000075711.21	ENST00000660898.1	4649	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	81.0594251151586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAGAACAGCTAATAAA	-197297805	False	NA	-43	True	NA	NA	NA	197297853	197042963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
WTC11_00065384	chr3	-	4272	25	FSM	ENSG00000075711.21	ENST00000659716.1	4272	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	78.3396717293777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGGAGTTGTTTATTA	-197296973	True	NA	-45	True	NA	NA	NA	197298612	197043074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
WTC11_00065395	chr3	-	3529	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	-2	0	2	multi-exon	FALSE	canonical	3	22	junction_7	57.0864006822741	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAGTTGCACGTGTGCG	NA	False	NA	-5	True	ATTAAA	-17	NA	197555968	197509780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
WTC11_00065396	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	56.1854073581388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	197555972	197512167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
WTC11_00065400	chr3	-	4153	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	21	-2619	-4	123	multi-exon	FALSE	canonical	3	43	junction_1	38.0879754981939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTCATCTGTTGATG	-197623501	True	NA	NA	False	NA	NA	NA	197627888	197611407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
WTC11_00065401	chr3	-	4933	6	NIC	ENSG00000214135.9	novel	2435	7	NA	NA	0	123	intron_retention	FALSE	canonical	3	36	junction_3	44.0753899585699	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTCATCTGTTGATG	-197623484	True	NA	NA	False	NA	NA	NA	197627871	197611407	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197615686_197619739_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
WTC11_00065403	chr3	-	838	5	FSM	ENSG00000214135.9	ENST00000437008.5	838	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	63.5098417570064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAATCTAATTTCTACT	-197623459	True	NA	NA	False	NA	NA	NA	197627846	197619739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627571
WTC11_00065405	chr3	-	381	1	FSM	ENSG00000284146.1	ENST00000401223.1	81	1	-301	1	-301	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCATTTCGTCCACTTAT	NA	False	NA	NA	False	NA	NA	NA	197674877	197674496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197674500_197674900
WTC11_00065412	chr3	-	2176	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	20	-215	20	215	multi-exon	FALSE	canonical	3	20	junction_2	10.4899952335547	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGAGCCACCAATCCCC	-197949249	True	NA	NA	False	NA	NA	NA	197949905	197888861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
WTC11_00065415	chr3	+	500	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATCTGTTAGATTTGCC	17861359	False	NA	NA	False	GATAAA	-39	NA	17861448	17861948	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_17861400_17861900
WTC11_00065416	chr3	+	5592	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20161254	20166846	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_20161300_20166800
WTC11_00065417	chr3	+	308	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAATCTTATCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	27630239	27630547	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_27630200_27630500
WTC11_00065418	chr3	+	308	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGAGCAATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	30084672	30084980	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_30084700_30085000
WTC11_00065419	chr3	+	221	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGCATAGTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	34641051	34641272	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34641100_34641300
WTC11_00065420	chr3	+	527	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAAGCTTTGCGGCAG	NA	False	NA	NA	False	AAGAAA	-30	NA	34641712	34642239	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34641700_34642200
WTC11_00065421	chr3	+	287	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37758040	37758327	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_37758000_37758300
WTC11_00065422	chr3	+	3543	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41543223	41546766	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_41543200_41546800
WTC11_00065425	chr3	+	301	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAATTTTGAAAAG	45686647	False	NA	NA	False	NA	NA	NA	45686667	45686968	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_45686700_45687000
WTC11_00065426	chr3	+	219	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAAAACAGGTATAA	NA	False	NA	NA	False	ACTAAA	-12	NA	46246800	46247019	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46246800_46247000
WTC11_00065428	chr3	+	638	1	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	52595830	52596468	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_52595800_52596500
WTC11_00065429	chr3	+	910	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCCAGGGGCTCTCAG	76049416	False	NA	NA	False	NA	NA	NA	76049426	76050336	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_76049400_76050300
WTC11_00065431	chr3	+	202	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAGCTTCAGGTAACT	78326096	False	NA	NA	False	NA	NA	NA	78326120	78326322	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78326100_78326300
WTC11_00065432	chr3	+	436	1	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAATGTCAGGTGGATC	NA	False	NA	NA	False	NA	NA	NA	78584509	78584945	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78584500_78584900
WTC11_00065433	chr3	+	270	1	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCACCACGGGGTGGA	NA	False	NA	NA	False	NA	NA	NA	78585416	78585686	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78585400_78585700
WTC11_00065434	chr3	+	425	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTCACATGGACGCACA	NA	False	NA	18	True	AATAAA	-32	NA	98396748	98397173	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_98396700_98397200
WTC11_00065435	chr3	+	279	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110979093	110979372	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_110979100_110979400
WTC11_00065436	chr3	+	1284	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	112183343	112184627	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112183300_112184600
WTC11_00065438	chr3	+	215	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATTACAAGGACATTTTC	NA	False	NA	NA	False	NA	NA	NA	112696319	112696534	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112696300_112696500
WTC11_00065439	chr3	+	342	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCTTAAATGGGCTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	115794237	115794579	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115794200_115794600
WTC11_00065440	chr3	+	910	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCATGGGGTGGATA	NA	False	NA	NA	False	NA	NA	NA	115795134	115796044	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115795100_115796000
WTC11_00065442	chr3	+	240	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGGAGGAGGACTTTGC	NA	False	NA	NA	False	NA	NA	NA	118394171	118394411	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_118394200_118394400
WTC11_00065443	chr3	+	271	1	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTGGTTTTAAGCTA	NA	False	NA	NA	False	NA	NA	NA	124027367	124027638	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_124027400_124027600
WTC11_00065447	chr3	+	295	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACTTAAAC	NA	False	NA	NA	False	NA	NA	NA	132141767	132142062	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_132141800_132142100
WTC11_00065449	chr3	+	314	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGGTAGTAAACATTTT	NA	False	NA	NA	False	NA	NA	NA	141826277	141826591	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_141826300_141826600
WTC11_00065451	chr3	+	826	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATCAGTTATGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	153228950	153229776	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_153229000_153229800
WTC11_00065453	chr3	+	304	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACCAGTAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	168369750	168370054	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_168369800_168370100
WTC11_00065456	chr3	+	4251	1	Antisense	novelGene_ENSG00000288895.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTGTTCTAATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	176287127	176291378	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_176287100_176291400
WTC11_00065458	chr3	+	274	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	183152894	183153168	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_183152900_183153200
WTC11_00065461	chr3	+	215	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTAGAACCTCTCATT	190148310	False	NA	NA	False	NA	NA	NA	190148342	190148557	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_190148300_190148600
WTC11_00065463	chr3	+	281	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAGAAAAAAAATTCAAT	190424628	True	NA	7	True	AATAAA	-25	NA	190424649	190424930	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_190424600_190424900
WTC11_00065465	chr3	+	258	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGTGAGACTC	NA	False	NA	NA	False	NA	NA	NA	193436819	193437077	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_193436800_193437100
WTC11_00065471	chr3	+	1372	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	-13	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302534	True	NA	8	True	AATAAA	-16	NA	4303323	4317265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4313646_4313762_4316211
WTC11_00065472	chr3	+	1684	4	FSM	ENSG00000170364.13	ENST00000413809.5	1676	4	-8	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302534	True	NA	8	True	AATAAA	-16	NA	4303323	4317265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897_4313230_4313666_4313762_4316211
WTC11_00065473	chr3	+	457	2	FSM	ENSG00000170364.13	ENST00000490691.1	457	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCATCAGAAGTTGACAA	4303525	True	NA	NA	False	NA	NA	NA	4303612	4316412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303869_4316211
WTC11_00065474	chr3	+	9730	59	FSM	ENSG00000150995.21	ENST00000357086.10	9767	59	37	0	32	0	multi-exon	FALSE	non_canonical	0	0	junction_26	3.72573401302223	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGTGGCTTTCATTT	4492657	True	NA	NA	False	AATAAA	-21	NA	4493381	4847506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4493606_4494430_4494507_4516475_4516584_4521023_4521095_4627762_4627879_4639383_4639471_4642092_4642252_4644135_4644235_4645386_4645471_4645581_4645729_4652122_4652219_4653841_4653887_4658123_4658279_4660987_4661088_4662081_4662243_4663064_4663207_4665137_4665297_4667376_4667550_4669653_4669774_4670728_4670927_4673135_4673388_4674201_4674344_4675067_4675222_4676613_4676802_4680552_4680692_4681363_4681419_4683385_4683552_4683627_4683799_4684280_4684347_4685068_4685207_4688494_4688621_4691143_4691345_4693489_4693742_4697146_4697273_4699812_4699942_4702829_4702951_4706166_4706352_4710324_4710474_4711756_4711869_4733087_4733221_4735163_4735355_4766529_4766711_4768510_4768765_4775241_4775443_4777263_4777375_4779549_4779646_4782618_4782742_4783815_4783921_4787946_4788140_4795064_4795188_4800424_4800601_4806102_4806268_4811264_4811461_4813141_4813235_4814422_4814563_4815052_4815219_4818081_4818243_4836773_4836936_4846138
WTC11_00065477	chr3	+	5780	13	NIC	ENSG00000134109.11	novel	6113	12	NA	NA	-107	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	15.5194770100885	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTGTCATCTTGTTT	5187527	False	NA	0	True	ATTAAA	-12	NA	5187538	5219953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_5187685_5188180_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
WTC11_00065479	chr3	+	6027	11	NIC	ENSG00000134109.11	novel	6113	12	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	14.2421908427039	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTTCTTTTTTAC	5187711	False	NA	9	True	ATTAAA	-21	NA	5187722	5219962	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5211119_5211217_5213318_5213523_5215828
WTC11_00065480	chr3	+	1887	11	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	165.376812159383	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358051	True	NA	5	True	TTTAAA	-18	NA	9363097	9384870	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9382771_9382870_9383198_9383310_9384211_9384336_9384523
WTC11_00065481	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.825271656162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358051	True	NA	5	True	TTTAAA	-18	NA	9363097	9384870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00065482	chr3	+	2325	10	NIC	ENSG00000134077.16	novel	2390	10	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	112.445981544171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTGTAATTCCAGCAGT	NA	False	NA	16	True	TTTAAA	-29	NA	9362970	9384881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00065483	chr3	+	7142	24	NIC	ENSG00000168137.20	novel	5823	26	NA	NA	6	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_22	96.6556650193886	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAACTTCTTTGTCCA	9396277	True	NA	16	True	AATAAA	-25	NA	9397620	9478146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826_9430052_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
WTC11_00065484	chr3	+	3338	18	ISM	ENSG00000168137.20	ENST00000402198.7	6931	23	11	13396	11	5	5prime_fragment	FALSE	canonical	3	36	junction_17	99.196774141098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTACTATCTTTCTTC	9396282	True	NA	6	True	AATATA	-16	NA	9397625	9464758	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424
WTC11_00065485	chr3	+	6953	24	NIC	ENSG00000168137.20	novel	5823	26	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_22	96.6280652127915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAACTTCTTTGTCCA	9396282	True	NA	16	True	AATAAA	-25	NA	9397625	9478146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434589_9434631_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
WTC11_00065486	chr3	+	7429	26	NIC	ENSG00000168137.20	novel	6581	28	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	96.3352479625189	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACTTCTTTGTCCAAT	9396282	True	NA	18	True	AATAAA	-27	NA	9397625	9478148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826_9430052_9433369_9433563_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9454004_9454102_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
WTC11_00065491	chr3	+	1838	16	NIC	ENSG00000144550.14	novel	2042	21	NA	NA	1412	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	11.269230477524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCATGCATGTTGGCGA	9704729	True	NA	8	True	AATAAA	-21	NA	9705244	9729912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9705501_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
WTC11_00065492	chr3	+	1841	16	NNC	ENSG00000144550.14	novel	2042	21	NA	NA	1412	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7783228385407	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCATGCATGTTGGCGA	9704729	True	NA	8	True	AATAAA	-21	NA	9705244	9729912	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9705501_9705983_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
WTC11_00065493	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	79.5561908339005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	NA	False	NA	25	True	AATAAA	-33	NA	9749943	9766668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
WTC11_00065494	chr3	+	4834	5	FSM	ENSG00000214021.17	ENST00000383827.5	4834	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.91547594742265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTTTGCAGATGTAAATA	NA	False	NA	NA	False	NA	NA	NA	9818371	9836315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9820742_9825799_9825949_9826996_9827241_9828959_9829396_9834680
WTC11_00065495	chr3	+	1782	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	-3	-466	-3	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	9885179	True	NA	11	True	ATTAAA	-25	NA	9890570	9894349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9890812_9892808
WTC11_00065497	chr3	+	2354	18	FSM	ENSG00000163702.20	ENST00000383812.9	2388	18	34	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_7	10.5387733605309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	9916781	True	NA	33	True	AATAAA	-24	NA	9917107	9933621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
WTC11_00065498	chr3	+	2385	19	FSM	ENSG00000163702.20	ENST00000403601.8	2409	19	24	0	-3	0	multi-exon	FALSE	canonical	3	11	junction_6	13.0478700783019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	9916795	True	NA	33	True	AATAAA	-24	NA	9917121	9933621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
WTC11_00065500	chr3	+	2244	17	FSM	ENSG00000163702.20	ENST00000455057.5	2244	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.8648611605021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGGCCCACACGCGT	9916836	True	NA	29	True	AATAAA	-20	NA	9917162	9933617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
WTC11_00065502	chr3	+	2614	10	FSM	ENSG00000163703.20	ENST00000683239.1	2595	10	-19	0	-2	0	multi-exon	FALSE	canonical	3	51	junction_1	53.7141496864952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATCTCAGGAAATAAAGAA	9932476	True	NA	-24	True	NA	NA	NA	9933790	9944993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9944096_9944364
WTC11_00065504	chr3	+	2456	11	FSM	ENSG00000163703.20	ENST00000684181.1	2447	11	-9	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	60.4221813575114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCACCACATCCCCAC	9932510	True	NA	-65	True	NA	NA	NA	9933824	9944952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943889_9944096_9944364
WTC11_00065506	chr3	+	3379	8	FSM	ENSG00000163703.20	ENST00000683888.1	3370	8	-9	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	16.1586521967745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAAGGCATCAGTCTT	9932510	True	NA	7	True	AATAAA	-15	NA	9933824	9945024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
WTC11_00065508	chr3	+	2793	11	FSM	ENSG00000163703.20	ENST00000682642.1	2780	11	-13	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	58.637530643778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAACATGAGAATTAAAT	9932510	True	NA	-83	True	NA	NA	NA	9933824	9945304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674
WTC11_00065509	chr3	+	3730	8	FSM	ENSG00000163703.20	ENST00000683970.1	3725	8	-5	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	55.8646323075445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932510	True	NA	-2	True	AATAAA	-12	NA	9933824	9945385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076
WTC11_00065510	chr3	+	1995	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	-1	0	0	0	multi-exon	FALSE	canonical	2	26	junction_10	59.804917015021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	9932540	True	NA	15	True	AATAAA	-23	NA	9933854	9945032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
WTC11_00065514	chr3	+	2900	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	9983569	True	NA	NA	False	NA	NA	NA	9986892	10005244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9987265_10002716
WTC11_00065520	chr3	+	567	5	FSM	ENSG00000144554.13	ENST00000435522.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.5333629797241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACACCCTTCCTATCCC	10017858	True	NA	NA	False	NA	NA	NA	10026467	10034513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026627_10028624_10028722_10032298_10032424_10032831_10032973_10034468
WTC11_00065521	chr3	+	558	6	FSM	ENSG00000144554.13	ENST00000438741.1	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	44.3188447502865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTATTGTACTAGAA	10034686	False	NA	NA	False	AATAAA	-17	NA	10034706	10040684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10040536
WTC11_00065523	chr3	+	3117	8	NIC	ENSG00000157014.11	novel	4937	8	NA	NA	15	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	17.811942794722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTTGTTTTGAGTGA	10246836	True	NA	16	True	TATAAA	-18	NA	10248473	10279159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278663_10278761_10278884
WTC11_00065525	chr3	+	2296	18	FSM	ENSG00000197548.13	ENST00000354956.9	2296	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	25.3631070106135	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	11270149	True	NA	24	True	NA	NA	NA	11272415	11555083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11426803_11426927_11554810
WTC11_00065526	chr3	+	253	3	ISM	ENSG00000230342.2	ENST00000437591.1	1400	14	23345	7158	23345	-7158	internal_fragment	FALSE	canonical	3	29	junction_2	10	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATAAACCTCCTGCCGC	NA	False	NA	NA	False	NA	NA	NA	11883018	11884014	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_11883135_11883578_11883653_11883951
WTC11_00065530	chr3	+	3869	9	FSM	ENSG00000075975.17	ENST00000677816.1	3855	9	-14	0	-14	0	multi-exon	FALSE	canonical	1	4	junction_8	70.267346612776	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATTCTGCCCTCAAA	12554293	True	NA	NA	False	NA	NA	NA	12557042	12586208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115_12582343_12583787
WTC11_00065531	chr3	+	5692	9	NNC	ENSG00000075975.17	novel	2775	8	NA	NA	0	610	intron_retention	FALSE	non_canonical	0	0	junction_8	71.345987974097	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAGAAAGACCATTTTA	12554337	True	NA	NA	False	NA	NA	NA	12557086	12586818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115_12584661_12584848
WTC11_00065533	chr3	+	1865	8	NIC	ENSG00000163517.15	novel	1559	10	NA	NA	13	242	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	21.1119465164699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCCAAGCCAGGTCCT	13479570	True	NA	NA	False	NA	NA	NA	13480356	13505576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
WTC11_00065534	chr3	+	4172	17	NNC	ENSG00000163520.14	novel	4306	18	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_12	31.6962512570493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGGTCCCTTTACT	13548080	True	NA	6	True	TATAAA	-15	NA	13549121	13638404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629297_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
WTC11_00065535	chr3	+	4051	16	NIC	ENSG00000163520.14	novel	4306	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	12	junction_13	30.368111930481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGGTCCCTTTACT	13548080	True	NA	6	True	TATAAA	-15	NA	13549121	13638404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13631328_13631458_13636444_13636569_13637561
WTC11_00065536	chr3	+	4074	16	NIC	ENSG00000163520.14	novel	4127	17	NA	NA	-35	6	intron_retention	FALSE	canonical	2	20	junction_8	29.2252554403816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTACTTTTGTAAAG	13548048	True	NA	15	True	TATAAA	-24	NA	13549089	13638413	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
WTC11_00065537	chr3	+	602	5	FSM	ENSG00000154781.17	ENST00000463438.5	751	5	-2	151	0	-151	multi-exon	FALSE	canonical	3	195	junction_2	5.21416340365355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGCTGACATTTTGGGAG	14649700	True	NA	NA	False	NA	NA	NA	14651761	14661749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529
WTC11_00065538	chr3	+	3531	19	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	13	-2	combination_of_known_splicesites	TRUE	canonical	3	60	junction_14	25.5019365035697	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATTGCATAGTTTAAGT	15204128	True	NA	4	True	AATAAA	-15	NA	15206164	15252300	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15242177_15242254_15246731_15246795_15247326_15247458_15250930_15251024_15251115
WTC11_00065541	chr3	+	623	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	376	3342	1	0	5prime_fragment	FALSE	canonical	1	64	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	15599628	True	NA	19	True	ATTAAA	-19	NA	15601745	15642240	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_15601771_15635423_15635689_15641907
WTC11_00065542	chr3	+	644	2	FSM	ENSG00000169814.16	ENST00000642517.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTATGCACCGACCCTT	15602034	False	NA	NA	False	CATAAA	-19	NA	15602137	15606911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15602311_15606440
WTC11_00065549	chr3	+	890	5	FSM	ENSG00000228956.9	ENST00000593444.5	881	5	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.2110436623893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATAGTGAGTTTAGT	NA	False	NA	NA	False	NA	NA	NA	18465982	18530317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18466040_18526386_18526541_18527173_18527327_18527950_18528140_18529980
WTC11_00065550	chr3	+	831	4	FSM	ENSG00000228956.9	ENST00000631076.2	831	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	10.4986771653491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCATAAAAGGAGTCAAAAG	NA	False	NA	NA	False	TATAAA	-38	NA	18465982	18530447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18466040_18526386_18526541_18527173_18527327_18529980
WTC11_00065551	chr3	+	1746	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50125	-978	-9683	621	3prime_fragment	FALSE	canonical	1	3	junction_1	10.9645894689324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATAGATAGGAG	18515908	True	NA	NA	False	NA	NA	NA	18516107	18531348	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
WTC11_00065552	chr3	+	7314	18	FSM	ENSG00000114166.8	ENST00000263754.5	4410	18	-32	-2872	-32	2872	multi-exon	FALSE	canonical	0	0	junction_11	2.27670617416043	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCTCTGTCAACCTG	20040327	True	NA	NA	False	NA	NA	NA	20040413	20157276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_20040781_20072332_20072460_20095262_20095409_20099861_20099955_20101286_20101469_20111595_20111788_20114881_20114989_20119597_20119724_20122667_20122805_20125904_20126114_20127422_20127550_20136941_20137053_20140220_20140365_20146315_20146431_20147962_20148000_20148242_20148307_20148402_20148488_20152331
WTC11_00065553	chr3	+	642	1	FSM	ENSG00000132967.9	ENST00000255320.6	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTGTAGCGCAGTTTT	22381734	False	NA	NA	False	NA	NA	NA	22381818	22382460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_22381800_22382500
WTC11_00065554	chr3	+	432	3	FSM	ENSG00000170142.12	ENST00000481622.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTGATCCTCATTCA	23793883	True	NA	NA	False	NA	NA	NA	23805983	23808835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23806089_23807236_23807422_23808693
WTC11_00065556	chr3	+	1801	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	-16	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23669530	True	NA	27	True	AATAAA	-16	NA	23917131	23919551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23918577_23919195
WTC11_00065557	chr3	+	913	2	FSM	ENSG00000179796.12	ENST00000432040.1	927	2	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGACAGCCCACAACGT	26624073	True	NA	NA	False	NA	NA	NA	26624094	26710161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_26624359_26709512
WTC11_00065558	chr3	+	446	1	FSM	ENSG00000230807.1	ENST00000408928.2	371	1	-24	-51	-24	51	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCTTTCGTTGACTG	27486209	False	NA	NA	False	AATAAA	-2	NA	27486222	27486668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27486200_27486700
WTC11_00065559	chr3	+	2451	1	FSM	ENSG00000271943.3	ENST00000684785.1	2409	1	53	-95	19	95	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTAGGCTTTGGGGTT	27632943	False	NA	NA	False	AATAAA	-35	NA	27632994	27635445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27633000_27635400
WTC11_00065560	chr3	+	386	3	FSM	ENSG00000225548.7	ENST00000414382.5	543	3	15	142	15	-142	multi-exon	TRUE	canonical	0	0	junction_2	39	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGATAAGTTCTCTTCTC	27821335	True	NA	NA	False	NA	NA	NA	27821502	27891159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27821725_27824649_27824749_27891094
WTC11_00065564	chr3	+	8479	15	FSM	ENSG00000144642.22	ENST00000434693.6	8540	15	50	11	-39	-6	multi-exon	TRUE	canonical	0	0	junction_1	8.04610439395161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATTGAATAGGGCTGT	29281004	True	NA	NA	False	AATAAA	-13	NA	29281031	30010380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_29281757_29434745_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29944206_29944255_29988142_29988224_29991081_29991210_30003855
WTC11_00065565	chr3	+	8443	15	FSM	ENSG00000144642.22	ENST00000383767.7	8449	15	0	6	0	-6	multi-exon	FALSE	canonical	1	6	junction_10	6.94328334964586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATTGAATAGGGCTGT	29281043	True	NA	NA	False	AATAAA	-13	NA	29281070	30010380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_29281757_29434742_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29944206_29944255_29988142_29988224_29991081_29991210_30003855
WTC11_00065566	chr3	+	1489	13	FSM	ENSG00000144642.22	ENST00000273139.13	1598	13	0	109	0	12	multi-exon	FALSE	canonical	1	6	junction_10	6.59334681495083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTGGGCTGTGCTAA	29281417	False	NA	NA	False	NA	NA	NA	29281451	29991209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_29281757_29434742_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29988142_29988224_29991081
WTC11_00065567	chr3	+	1547	14	FSM	ENSG00000144642.22	ENST00000452462.5	1547	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	6.39063664171188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGTTTTTATGTGC	29281517	False	NA	NA	False	NA	NA	NA	29281551	30004013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_29281757_29434742_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29988142_29988224_29991081_29991210_30003855
WTC11_00065569	chr3	+	1074	6	FSM	ENSG00000163527.10	ENST00000436236.1	1074	6	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_3	51.3123766746386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATTGAATTTGTATT	31596788	True	NA	NA	False	AAAAAG	-5	NA	31596805	31620296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675
WTC11_00065572	chr3	+	295	1	FSM	ENSG00000213849.3	ENST00000449702.1	371	1	74	2	74	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTGATGGTCAAATAC	NA	False	NA	NA	False	NA	NA	NA	32508028	32508323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32508000_32508300
WTC11_00065573	chr3	+	2563	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	10	0	10	0	multi-exon	FALSE	canonical	3	18	junction_12	63.9517010657586	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	32685129	False	NA	13	True	AATAAA	-20	NA	32685154	32773714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
WTC11_00065574	chr3	+	2592	19	NNC	ENSG00000182973.20	novel	2772	19	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_12	59.5709194527367	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32678911	True	NA	16	True	ATTAAA	-18	NA	32685364	32773875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737412_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
WTC11_00065575	chr3	+	821	1	FSM	ENSG00000213842.2	ENST00000379452.3	992	1	188	-17	188	17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACACACAAA	NA	False	NA	NA	False	AATAAA	-13	NA	32753097	32753918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32753100_32753900
WTC11_00065576	chr3	+	2360	15	FSM	ENSG00000153558.16	ENST00000484457.6	3827	15	0	1467	0	0	multi-exon	FALSE	canonical	2	9	junction_11	3.35105831592569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAAGTCAGAGG	33277178	True	NA	NA	False	AATAAA	-16	NA	33277441	33386625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
WTC11_00065583	chr3	+	7717	24	NIC	ENSG00000144674.17	novel	7806	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	67.3927068577761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTTGTTTATTGTAC	37238546	True	NA	4	True	AATAAA	-14	NA	37243270	37366745	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
WTC11_00065585	chr3	+	2624	1	FSM	ENSG00000230409.3	ENST00000420496.3	906	1	-156	-1562	-156	1562	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATTATTAAAGAGTATG	NA	False	NA	NA	False	AATAAA	-31	NA	37275536	37278160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37275500_37278200
WTC11_00065586	chr3	+	1706	3	FSM	ENSG00000198590.12	ENST00000669217.1	1988	3	282	0	282	0	multi-exon	FALSE	canonical	1	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACATTTACAC	NA	False	NA	NA	False	AATAAA	-37	NA	37410619	37417863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37411310_37416553_37416725_37417018
WTC11_00065587	chr3	+	7910	28	FSM	ENSG00000144668.12	ENST00000264741.10	7860	28	-50	0	-24	0	multi-exon	TRUE	canonical	2	6	junction_6	5.00397647089412	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAGTTCAATCTGTAA	37452079	False	NA	5	True	AATAAA	-17	NA	37452090	37823507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391_37777518_37779901_37780022_37784976_37785079_37803822_37803943_37818890
WTC11_00065588	chr3	+	3753	8	NIC	ENSG00000144677.15	novel	4753	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	12	junction_7	38.7719654663321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	37860178	True	NA	15	True	AATAAA	-15	NA	37861885	37984469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37862279_37947056_37947212_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741_37980864_37981824
WTC11_00065590	chr3	+	321	3	NNC	ENSG00000093217.11	novel	1666	3	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	14.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATCTAGTTTATGGTA	38346278	True	NA	NA	False	AATAAA	-13	NA	38346826	38357152	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_38346926_38348549_38348633_38357013
WTC11_00065592	chr3	+	374	3	FSM	ENSG00000168026.19	ENST00000490036.5	610	3	0	236	0	-236	multi-exon	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCCACCATGCTCAA	39107600	True	NA	NA	False	NA	NA	NA	39107731	39110139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39107865_39109084_39109215_39110028
WTC11_00065594	chr3	+	441	2	NNC	ENSG00000287620.1	novel	1251	2	NA	NA	37	1935	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACTCAATCATTTCAT	39177730	True	NA	NA	False	AATAAA	-22	NA	39177797	39181521	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_39177929_39181211
WTC11_00065595	chr3	+	283	1	FSM	ENSG00000228168.1	ENST00000424115.1	961	1	755	-77	755	77	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAAAGCATAGTGGTGG	39335702	False	NA	NA	False	NA	NA	NA	39335733	39336016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39335700_39336000
WTC11_00065596	chr3	+	1038	7	NNC	ENSG00000168028.14	novel	1140	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	210	junction_3	2090.62883283156	1143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39368036	True	NA	5	True	AATAAA	-16	NA	39406715	39412438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_39406765_39407620_39407787_39408605_39408725_39410755_39411000_39411648_39411778_39411895_39412062_39412273
WTC11_00065598	chr3	+	356	1	FSM	ENSG00000234287.1	ENST00000457554.1	255	1	-33	-68	-33	68	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAGAAAGAAATTGAAGAG	NA	False	NA	NA	False	AATAAA	-27	NA	40761511	40761867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40761500_40761900
WTC11_00065600	chr3	+	4843	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	12	-115	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	34.3445923022557	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTATTCTGATTTGTA	42157863	True	NA	23	True	AATAAA	-24	NA	42160180	42225774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
WTC11_00065601	chr3	+	751	5	FSM	ENSG00000114812.13	ENST00000450274.5	743	5	-8	0	-8	0	multi-exon	FALSE	canonical	2	2	junction_1	6.68487097856047	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCCCAGCCCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	42501903	42527496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42502230_42513748_42513855_42519222_42519331_42525886_42525994_42527392
WTC11_00065602	chr3	+	939	4	Fusion	ENSG00000008324.12_ENSG00000289558.1	novel	2697	3	NA	NA	-37	-124	multi-exon	FALSE	canonical	3	41	junction_1	542.224020944193	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTGATGTGGAGGTA	42580725	True	NA	13	True	AATAAA	-15	NA	42582100	42594990	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_42582236_42590808_42590967_42591524_42591602_42594421
WTC11_00065604	chr3	+	10607	18	NIC	ENSG00000114857.19	novel	7325	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_6	48.9447821070002	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	42592270	True	NA	4	True	ATTAAA	-18	NA	42600717	42648735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42620015_42620044_42621428_42621517_42627199_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643901_42644004_42645887
WTC11_00065607	chr3	+	5519	6	FSM	ENSG00000114853.15	ENST00000680014.1	5498	6	-82	61	-82	-61	multi-exon	FALSE	canonical	1	2	junction_2	5.16139516022558	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCACAGCAGGCATGC	42654399	False	NA	-57	True	NA	NA	NA	42654422	42667519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42654696_42658274_42659829_42661484_42661633_42663011_42663128_42663796_42663942_42664236
WTC11_00065608	chr3	+	3207	4	FSM	ENSG00000182983.15	ENST00000328199.6	3186	4	-21	0	3	0	multi-exon	FALSE	canonical	1	2	junction_3	2.05480466765633	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTCCAGGACCAAAGATA	42906010	True	NA	NA	False	NA	NA	NA	42906144	42916995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42906442_42908021_42908149_42908795_42908910_42914326
WTC11_00065609	chr3	+	339	4	FSM	ENSG00000240747.8	ENST00000418176.1	2566	4	1984	243	1984	-240	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAGATATACTTACTTA	NA	False	NA	NA	False	NA	NA	NA	42938845	42942549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42938932_42941225_42941353_42941957_42942072_42942537
WTC11_00065611	chr3	+	4929	1	FSM	ENSG00000261786.1	ENST00000568686.1	5067	1	86	52	86	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATTGTGAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	44117384	44122313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44117400_44122300
WTC11_00065612	chr3	+	733	4	FSM	ENSG00000283036.3	ENST00000634998.2	838	4	87	18	87	-17	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCCTTAGAAAACAATA	NA	False	NA	NA	False	NA	NA	NA	44428036	44429511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44428159_44428554_44428625_44428846_44428942_44429065
WTC11_00065613	chr3	+	1748	6	FSM	ENSG00000196345.13	ENST00000341840.7	1757	6	-10	19	0	19	multi-exon	FALSE	canonical	2	4	junction_5	13.2151428293454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACGAAGTACTTCAAAAG	44553916	True	NA	3	True	ATTAAA	-18	NA	44555192	44583464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44555519_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44582971
WTC11_00065615	chr3	+	3980	1	FSM	ENSG00000272077.1	ENST00000606008.1	1953	1	-2033	6	-2033	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTATATGTGTTGCAAAT	NA	False	NA	7	True	TATAAA	-15	NA	44665378	44669358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44665400_44669400
WTC11_00065616	chr3	+	3152	3	FSM	ENSG00000196653.12	ENST00000436624.7	3154	3	-6	8	-6	-6	multi-exon	FALSE	canonical	2	4	junction_1	9	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAATGCTTGGTTATT	44712296	True	NA	3	True	ATTAAA	-14	NA	44712653	44723823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44712741_44720202_44720317_44720872
WTC11_00065618	chr3	+	4859	36	NNC	ENSG00000163808.17	novel	4760	35	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	41.0910785292121	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	44759134	True	NA	9	True	AATAAA	-21	NA	44761815	44853256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44761885_44766019_44766141_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
WTC11_00065619	chr3	+	1128	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	32.2628096868343	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44861774	False	NA	12	True	AATAAA	-22	NA	44861829	44865664	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
WTC11_00065620	chr3	+	1424	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860374	True	NA	12	True	AATAAA	-22	NA	44861875	44865664	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862528_44864196_44864344_44865039
WTC11_00065621	chr3	+	1162	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	34.4770455037358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCAGGTACGGTATCTT	44860394	True	NA	11	True	AATAAA	-21	NA	44861895	44865663	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862117_44862357_44862528_44864196_44864344_44865039
WTC11_00065622	chr3	+	1055	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	39.8580815728337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860406	True	NA	12	True	AATAAA	-22	NA	44861907	44865664	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862016_44862352_44862528_44864196_44864344_44865039
WTC11_00065625	chr3	+	4281	9	NNC	ENSG00000144791.10	novel	11442	8	NA	NA	-454	3757	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2380925373778	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACAGGCCCAACTCCA	45593217	True	NA	NA	False	NA	NA	NA	45593869	45678323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_45594779_45594802_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453_45673506_45674342_45674412_45676921
WTC11_00065630	chr3	+	8842	54	FSM	ENSG00000160796.18	ENST00000450053.8	8842	54	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	54.5211002621784	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCGTCTCCGAGTGT	46978087	True	NA	28	True	AATAAA	-18	NA	46979665	47009701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_46979913_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991218_46991305_46991405_46991689_46991839_46991947_46992474_46992556_46993936_46994021_46994454_46994554_46995031_46995634_46995713_46995847_46995931_46996052_46996270_46996593_46996750_46996834_46996953_46997047_46997258_46997434_46997560_46997695_46998066_46998227_46998462_46998566_46998716_46998880_46998958_46999118_46999314_46999475_46999629_46999716_46999888_47000405_47001000_47001180_47001278_47001439_47001688_47001827_47001919_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004394_47004494_47004591_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007065_47007156_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
WTC11_00065632	chr3	+	8364	53	NNC	ENSG00000160796.18	novel	8842	54	NA	NA	199	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_9	56.6028675544324	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCGTCTCCGAGTGT	46978648	False	NA	28	True	AATAAA	-18	NA	46979864	47009701	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_46979913_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991218_46991305_46991405_46991689_46991839_46991947_46992474_46992556_46993936_46994021_46994454_46994554_46995031_46995634_46995713_46995847_46995931_46996052_46996270_46996593_46996750_46996834_46996953_46997047_46997258_46997434_46997560_46997695_46998066_46998227_46998462_46998566_46998716_46998880_46998958_46999118_46999314_46999475_46999629_46999716_46999888_47000405_47001000_47001180_47001278_47001439_47001688_47001827_47001919_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004211_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007065_47007156_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
WTC11_00065633	chr3	+	765	7	FSM	ENSG00000160796.18	ENST00000423436.1	765	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	57.3335755808836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTCAGCTGCCACC	47005270	False	NA	NA	False	NA	NA	NA	47005280	47007674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007524
WTC11_00065634	chr3	+	449	5	FSM	ENSG00000076201.16	ENST00000477276.2	882	5	433	0	433	0	multi-exon	FALSE	canonical	2	8	junction_1	21.2294017814916	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTACAGCGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	47405712	47406750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47405799_47405944_47406047_47406324_47406406_47406480_47406613_47406702
WTC11_00065635	chr3	+	3961	21	NIC	ENSG00000132153.15	novel	3855	22	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_3	162.300793282103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47802725	True	NA	15	True	AATAAA	-15	NA	47802929	47850187	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00065636	chr3	+	3660	20	FSM	ENSG00000132153.15	ENST00000446256.6	3660	20	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	172.687827806641	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTCCACTAGGGGCT	47810670	False	NA	23	True	AATAAA	-23	NA	47810683	47850195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
WTC11_00065637	chr3	+	1323	1	FSM	ENSG00000199476.1	ENST00000362606.1	108	1	0	-1215	0	1215	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGACTTCTAGATTAT	NA	False	NA	9	True	AATAAA	-22	NA	48288586	48289909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48288600_48289900
WTC11_00065639	chr3	+	4896	13	FSM	ENSG00000164053.22_ENSG00000213689.14	ENST00000412052.4	2721	13	-247	-1928	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.8422284466534	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGAGTGGTCAATTGG	48444407	False	NA	3	True	AATAAA	-18	NA	48446845	48467644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48447523_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
WTC11_00065640	chr3	+	1234	1	FSM	ENSG00000271973.1	ENST00000607025.1	279	1	-959	4	-959	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTGTGTGAAGCCT	48671463	False	NA	NA	False	AATAAA	-15	NA	48671495	48672729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48671500_48672700
WTC11_00065644	chr3	+	738	5	FSM	ENSG00000178057.15	ENST00000451378.2	774	5	36	0	36	0	multi-exon	FALSE	canonical	0	0	junction_1	303.81984793624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATCAGGTGTGTTGC	49021629	False	NA	20	True	NA	NA	NA	49021640	49023288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49021785_49022345_49022539_49022701_49022769_49022875_49022977_49023055
WTC11_00065646	chr3	+	5603	4	FSM	ENSG00000173402.12	ENST00000538711.5	5582	4	-23	2	-23	1	multi-exon	FALSE	canonical	3	11	junction_2	199.902198309295	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTTGCATCTGGGCATCT	49470079	False	NA	NA	False	AATAAA	-21	NA	49470108	49535616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
WTC11_00065647	chr3	+	862	2	FSM	ENSG00000164061.5	ENST00000467456.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCTGGTTTGGGCTTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	49643028	49651349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49643153_49650611
WTC11_00065648	chr3	+	4355	39	NIC	ENSG00000164068.16	novel	4255	39	NA	NA	-21	-153	combination_of_known_junctions	TRUE	canonical	2	22	junction_1	34.2886658223693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCTTTGCCCTTCTCC	49686693	True	NA	NA	False	NA	NA	NA	49689516	49721373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49689823_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
WTC11_00065649	chr3	+	4249	39	NNC	ENSG00000164068.16	novel	4255	39	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.9589368453147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATACAGCCCTGGCCC	49686746	True	NA	5	True	ATTAAA	-6	NA	49689569	49721519	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_49689607_49691129_49691248_49691424_49691510_49697125_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
WTC11_00065651	chr3	+	2066	16	NIC	ENSG00000004534.15	novel	2260	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	241.189183468542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928765	True	NA	10	True	AATAAA	-17	NA	49940139	50077249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_50048244_50048320_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
WTC11_00065654	chr3	+	2412	23	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_5	67.9522954933085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGTGGGGTCAGGTC	50085671	True	NA	NA	False	NA	NA	NA	50088918	50117379	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249
WTC11_00065655	chr3	+	5625	25	FSM	ENSG00000003756.17	ENST00000464087.6	5616	25	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	85.6144052650539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	50085706	True	NA	10	True	AAGAAA	-10	NA	50088953	50118957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107017_50107088_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
WTC11_00065657	chr3	+	3775	18	NIC	ENSG00000001617.12	novel	3607	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_5	24.6014599954969	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGCTTCTCTCCTTGG	50152281	True	NA	19	True	AATAAA	-19	NA	50155061	50189074	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50155565_50159574_50159735_50173792_50173954_50174051_50174115_50174230_50174351_50176767_50176862_50182283_50182404_50182643_50182784_50182903_50183019_50183185_50183256_50183419_50183565_50184591_50184815_50185442_50185532_50185665_50185708_50185888_50186047_50186280_50186349_50186612_50186747_50187704
WTC11_00065659	chr3	+	2168	8	FSM	ENSG00000114353.17	ENST00000441156.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	426.274798787862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGAACTGATGGGTATT	50219063	True	NA	7	True	AATAAA	-20	NA	50236203	50259354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50236454_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
WTC11_00065660	chr3	+	586	2	FSM	ENSG00000230454.1	ENST00000426302.1	430	2	0	-156	0	110	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGTGGCAAAGCAAG	50261200	False	NA	NA	False	NA	NA	NA	50261232	50263468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50261317_50262966
WTC11_00065662	chr3	+	3184	17	FSM	ENSG00000012171.20	ENST00000616701.5	3184	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	6.48284997127035	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	50269121	True	NA	NA	False	NA	NA	NA	50269146	50277546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
WTC11_00065663	chr3	+	2755	17	FSM	ENSG00000012171.20	ENST00000433753.4	2755	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	6.12850664925804	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAATGGCCCCAGCAGA	50269143	True	NA	4	True	AATAAA	-17	NA	50269168	50277142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273915_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
WTC11_00065665	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	50337500	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50337500_50338300
WTC11_00065667	chr3	+	3720	28	NNC	ENSG00000088538.13	novel	9069	53	NA	NA	-181	-102752	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_27	20.1112816308165	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGCTTATGCTTTG	50674735	False	NA	NA	False	TATAAA	-17	NA	50674745	51281446	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51089242_51089285_51090229_51090385_51146548_51146631_51159243_51159305_51160554_51160703_51208773_51208863_51214121_51214248_51225648_51225774_51227282_51227446_51227981_51228089_51228660_51228833_51229511_51229610_51236344_51236429_51237489_51237591_51246725_51246808_51260155_51260327_51270814_51271008_51275078_51275207_51278436_51278529_51280105_51280205_51281111
WTC11_00065668	chr3	+	5715	25	NIC	ENSG00000088538.13	novel	9069	53	NA	NA	635367	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	4.32691832858239	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATCCACTGAATTCAC	NA	False	NA	4	True	ATTAAA	-14	NA	51310293	51384192	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_51310327_51312003_51312080_51312475_51312577_51312843_51312903_51314979_51315129_51330137_51330224_51333157_51333254_51338358_51338420_51338934_51339029_51341236_51341386_51348851_51348939_51350287_51350393_51354881_51355024_51356088_51356256_51356406_51356494_51356961_51357142_51357757_51357842_51357960_51358078_51360510_51360633_51361858_51361998_51362526_51362675_51374468_51374588_51375747_51375836_51380124_51380208_51381049
WTC11_00065672	chr3	+	1177	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	-3	0	-3	0	multi-exon	FALSE	canonical	1	2	junction_2	69.6770327216142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669450	True	NA	10	True	AATAAA	-27	NA	51671171	51704322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
WTC11_00065673	chr3	+	1491	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	-3	0	-3	0	multi-exon	FALSE	canonical	2	5	junction_1	73.6059780180931	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669450	True	NA	10	True	AATAAA	-27	NA	51671171	51704322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
WTC11_00065675	chr3	+	578	4	FSM	ENSG00000243989.9	ENST00000468068.1	654	4	76	0	50	0	multi-exon	FALSE	canonical	3	343	junction_2	12.2836838484589	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAGGGCCACCGGTTCC	51982950	False	NA	NA	False	NA	NA	NA	51984920	51986281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51985272_51985360_51985466_51985851_51985947_51986254
WTC11_00065676	chr3	+	2950	13	Fusion	ENSG00000164088.18_ENSG00000243224.1	novel	2231	10	NA	NA	20	-11	multi-exon	FALSE	canonical	1	4	junction_1	7.99305253885453	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTACAGAAGAGCCTT	52239040	True	NA	-4	True	ATTAAA	-2	NA	52239277	52250584	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_52239436_52244940_52245039_52245128_52245241_52245392_52246049_52246694_52246813_52246973_52247229_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
WTC11_00065678	chr3	+	1364	1	FSM	ENSG00000239557.1	ENST00000495716.1	1231	1	-88	-45	-88	45	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTTTTATAAGATAG	NA	False	NA	NA	False	ACTAAA	-35	NA	52373563	52374927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52373600_52374900
WTC11_00065679	chr3	+	2208	5	NIC	ENSG00000010318.22	novel	576	5	NA	NA	-145	1011	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	9.54921462739214	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTGAACATGTGC	52409122	True	NA	25	True	AATAAA	-25	NA	52410514	52415855	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414588_52414727
WTC11_00065682	chr3	+	512	4	FSM	ENSG00000010327.10	ENST00000462681.1	1499	4	987	0	-723	0	multi-exon	FALSE	canonical	1	4	junction_3	1.63299316185545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGTGGACAACATGGT	52522429	False	NA	NA	False	AATGAA	-1	NA	52522554	52523323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52522689_52522774_52522941_52523024_52523135_52523221
WTC11_00065685	chr3	+	2838	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	-16	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.38401841759365	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	53845918	True	NA	-2	True	AATAAA	-9	NA	53846567	53865588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
WTC11_00065687	chr3	+	545	1	FSM	ENSG00000229806.1	ENST00000449885.1	432	1	-115	2	-115	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGGCTCAGCTAATAA	NA	False	NA	NA	False	NA	NA	NA	54626099	54626644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_54626100_54626600
WTC11_00065688	chr3	+	3075	17	NNC	ENSG00000180376.17	novel	3042	18	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	8	junction_10	48.6685216541452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACCGGTTCTTCTG	56552394	True	NA	29	True	AATAAA	-43	NA	56557184	56621829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_56557254_56558845_56558911_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613755_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
WTC11_00065689	chr3	+	2437	7	NNC	ENSG00000180376.17	novel	2188	7	NA	NA	0	176	intron_retention	FALSE	canonical	3	12	junction_1	65.1854192967177	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTATTCCAATAAAACT	56552428	True	NA	-59	True	TATAAA	-2	NA	56557218	56570922	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_56557264_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566739_56566949_56567054_56569312
WTC11_00065690	chr3	+	3210	16	NNC	ENSG00000180376.17	novel	3042	18	NA	NA	0	-1683	intron_retention	FALSE	canonical	3	9	junction_12	46.439638241485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGCCGTCTTTGAGTA	56552428	True	NA	8	True	AATAAA	-26	NA	56557218	56620079	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615903_56616054_56617111_56617606_56618171_56618213_56619270
WTC11_00065691	chr3	+	2420	14	NNC	ENSG00000180376.17	novel	3134	18	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	43.4358671631293	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	56561897	False	NA	18	True	AATAAA	-32	NA	56566687	56621818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_56566739_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615889_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
WTC11_00065692	chr3	+	437	2	FSM	ENSG00000272146.6	ENST00000607297.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGAGAATCTTTCTT	57597690	True	NA	NA	False	AATAAA	-33	NA	57597788	57600916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57598052_57600742
WTC11_00065693	chr3	+	5367	22	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	40.29488806952	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGCATGTTTGAGTTGAAT	57751182	True	NA	16	True	AATAAA	-17	NA	57756320	57929166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
WTC11_00065694	chr3	+	5467	24	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_13	44.6310648211528	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGTTTGAGTTGAATAT	57751186	False	NA	18	True	AATAAA	-19	NA	57756324	57929168	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57865241_57865293_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
WTC11_00065696	chr3	+	383	1	FSM	ENSG00000213509.4	ENST00000462517.1	487	1	17	87	17	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGAGGCCATGGAGCG	NA	False	NA	NA	False	NA	NA	NA	57941834	57942217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57941800_57942200
WTC11_00065697	chr3	+	3280	15	FSM	ENSG00000168297.16	ENST00000468776.5	1653	15	-12	-1615	-7	546	multi-exon	FALSE	canonical	0	0	junction_1	25.0582993706065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCTGGGTTTTTTGTT	58332336	True	NA	NA	False	NA	NA	NA	58332872	58426673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58333091_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
WTC11_00065698	chr3	+	2031	18	FSM	ENSG00000168297.16	ENST00000484288.5	2031	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	22.2945056616863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAGTTACAGGGAGACA	58332374	True	NA	NA	False	NA	NA	NA	58332910	58420960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58420535
WTC11_00065699	chr3	+	3562	19	NIC	ENSG00000168297.16	novel	3001	18	NA	NA	0	546	combination_of_known_junctions	FALSE	canonical	2	8	junction_17	24.9427121397992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCTGGGTTTTTTGTT	58332374	True	NA	NA	False	NA	NA	NA	58332910	58426673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58423460_58423495_58424751
WTC11_00065700	chr3	+	1898	8	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	20.860078071351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62948053	True	NA	17	True	AATAAA	-17	NA	62950441	63125062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63118698_63118943_63123322_63123449_63124082
WTC11_00065702	chr3	+	7076	13	FSM	ENSG00000163635.20	ENST00000674280.1	7076	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.53781733880318	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGCTTTGCTTTATAA	63863274	True	NA	-79	True	AATAAA	-26	NA	63863866	64003462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_63864159_63898398_63898498_63912587_63912924_63913156_63913226_63952378_63952484_63979914_63980168_63982185_63982446_63982938_63983022_63988058_63988325_63990175_63990375_63990737_63990860_63995504_63996484_63999449
WTC11_00065705	chr3	+	2063	2	FSM	ENSG00000241316.8	ENST00000671174.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAAATAAATGTAAAT	67654037	True	NA	NA	False	AGTAAA	-45	NA	67654737	67748468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_67655103_67746770
WTC11_00065707	chr3	+	409	3	FSM	ENSG00000277855.1	ENST00000613067.1	820	3	0	411	0	-411	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTCACTCTAATGCAAA	NA	False	NA	NA	False	TATAAA	-3	NA	71581720	71628147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_71581778_71627640_71627785_71627939
WTC11_00065709	chr3	+	3265	7	FSM	ENSG00000172986.13	ENST00000389617.9	3276	7	11	0	11	0	multi-exon	FALSE	canonical	2	7	junction_1	4.34613493680177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGACAATGATCTGGA	72887705	True	NA	94	True	ATTAAA	-21	NA	72888056	72976915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_72888509_72908366_72908560_72922203_72922336_72955097_72955350_72957228_72957353_72967546_72967720_72974976
WTC11_00065713	chr3	+	465	1	FSM	ENSG00000241622.1	ENST00000474487.1	481	1	67	-51	67	51	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTAACCAGTGGAAGACC	NA	False	NA	NA	False	NA	NA	NA	75658600	75659065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75658600_75659100
WTC11_00065714	chr3	+	652	2	FSM	ENSG00000242516.3	ENST00000692722.1	985	2	5	328	5	-327	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGGCCCGGTCATGAA	75670864	True	NA	NA	False	NA	NA	NA	75672258	75678973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75678832
WTC11_00065715	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75675763_75675881_75678832
WTC11_00065716	chr3	+	4602	23	NIC	ENSG00000185008.17	novel	8946	26	NA	NA	271	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	7.22140985754018	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTGATTAATTCTGT	77039757	True	NA	NA	False	AATAAA	-24	NA	77040156	77618180	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_77040847_77098013_77098341_77477413_77477572_77481098_77481220_77493243_77493383_77522774_77522903_77527402_77527415_77546337_77546463_77550817_77550990_77557943_77558150_77562650_77562733_77563166_77563330_77564953_77565121_77568312_77568435_77574498_77574731_77577489_77577615_77579946_77580119_77588750_77588934_77595141_77595185_77596622_77596751_77602209_77602492_77607797_77607955_77617512
WTC11_00065718	chr3	+	1196	8	NNC	ENSG00000175161.14	novel	1422	10	NA	NA	75563	-73547	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	6.0911444586651	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGTAGATTTCAGCTT	NA	False	NA	26	True	AATAAA	-34	NA	85802044	85993236	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_85802197_85883290_85883444_85886189_85886328_85912372_85912544_85935766_85935858_85961468_85961648_85979163_85979284_85993044
WTC11_00065721	chr3	+	3400	3	FSM	ENSG00000179097.7	ENST00000319595.7	3386	3	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATGGATCTGTCT	87792681	False	NA	NA	False	AAAAAG	-4	NA	87792691	87993839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_87792843_87822007_87822125_87990707
WTC11_00065722	chr3	+	5149	7	NIC	ENSG00000178694.10	novel	6431	6	NA	NA	3	-1270	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	21.9823161250634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTGTAACATGTTAT	94062301	True	NA	NA	False	TATAAA	-23	NA	94062992	94130562	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_94063139_94063811_94063980_94064436_94064547_94084354_94084451_94094139_94094295_94095032_94095155_94126210
WTC11_00065723	chr3	+	2732	2	Genic_Genomic	ENSG00000243547.1	novel	1386	1	NA	NA	-186	1220	multi-exon	TRUE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTAGATTTGATGTGTGC	NA	False	NA	NA	False	AATAAA	-10	NA	96349367	96352159	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_+_96350927_96350986
WTC11_00065724	chr3	+	1486	1	FSM	ENSG00000243547.1	ENST00000485383.1	1386	1	-113	13	-113	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGATGTTGAAGGAGTA	NA	False	NA	NA	False	NA	NA	NA	96349440	96350926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_96349400_96350900
WTC11_00065725	chr3	+	2058	5	FSM	ENSG00000080224.18	ENST00000470610.6	2058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.74341649025257	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCATGTCTATATT	96814415	True	NA	NA	False	AATAAA	-24	NA	96814580	97244696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_96815009_96866824_96866890_96987329_96987994_97226263_97226420_97243951
WTC11_00065727	chr3	+	1126	1	FSM	ENSG00000230301.6	ENST00000615035.3	1113	1	-13	0	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCCTAGCACTTTAATG	NA	False	NA	NA	False	NA	NA	NA	98264230	98265356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98264200_98265400
WTC11_00065728	chr3	+	896	1	FSM	ENSG00000244153.1	ENST00000466609.1	2769	1	1384	489	1384	-489	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGGCATTTTTCTCG	NA	False	NA	NA	False	AATATA	-12	NA	98659185	98660081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98659200_98660100
WTC11_00065729	chr3	+	1891	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	-5	1499	-5	418	multi-exon	FALSE	canonical	3	13	junction_1	12.838983845026	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	NA	False	NA	84	True	CATAAA	-18	NA	98732249	98794362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
WTC11_00065730	chr3	+	3521	9	ISM	ENSG00000064225.13	ENST00000483910.6	3198	10	3105	1562	3092	346	3prime_fragment	FALSE	canonical	3	39	junction_7	6.27992834354024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAATGAAGGCAGTGTT	NA	False	NA	12	True	ATTAAA	-27	NA	98766444	98794290	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
WTC11_00065732	chr3	+	212	1	FSM	ENSG00000249274.1	ENST00000504327.1	1006	1	88	706	88	-706	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATGAATTTACACTCT	NA	False	NA	NA	False	TATAAA	-44	NA	98782275	98782487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98782300_98782500
WTC11_00065736	chr3	+	1816	8	FSM	ENSG00000114354.15	ENST00000675499.1	1805	8	-11	0	-11	0	multi-exon	FALSE	canonical	1	3	junction_1	261.334955916107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709262	True	NA	12	True	AATAAA	-15	NA	100709283	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713653_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00065737	chr3	+	1915	8	FSM	ENSG00000114354.15	ENST00000675553.1	1906	8	-9	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	257.911628592557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709115	False	NA	12	True	AATAAA	-15	NA	100709352	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00065740	chr3	+	2255	6	NNC	ENSG00000081154.12	novel	2285	5	NA	NA	0	14248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1001.19816220367	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGCAGGCACCTATA	101537424	True	NA	NA	False	AAAAAG	-9	NA	101574218	101608713	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626_101594436_101608674
WTC11_00065741	chr3	+	1620	4	NNC	ENSG00000244119.2	novel	1704	3	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.96655480858378	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTATACTTTGTCTCTG	101686793	True	NA	NA	False	NA	NA	NA	101686872	101700917	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_101687390_101692892_101692970_101698271_101698333_101699952
WTC11_00065745	chr3	+	606	1	FSM	ENSG00000239997.1	ENST00000496394.1	590	1	74	-90	74	90	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTTACCCATTTGCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	106848744	106849350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_106848700_106849400
WTC11_00065748	chr3	+	1804	4	NNC	ENSG00000289358.1	novel	913	3	NA	NA	0	-24494	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.73488351136175	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	109336598	True	NA	NA	False	NA	NA	NA	109337739	109355480	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_109337981_109346915_109347174_109352998_109353223_109354399
WTC11_00065750	chr3	+	2943	6	FSM	ENSG00000144824.21	ENST00000486886.1	2943	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	14.0484874630688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAACTCTGACATCATA	NA	False	NA	0	True	AATGAA	-9	NA	111961944	111976453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
WTC11_00065751	chr3	+	3018	2	FSM	ENSG00000144827.9	ENST00000497293.1	724	2	-105	-2189	-97	2189	multi-exon	FALSE	canonical	3	227	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCATCAATTTGTCT	111978902	False	NA	NA	False	AAGAAA	-23	NA	111978912	111984510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111979204_111981783
WTC11_00065752	chr3	+	551	3	FSM	ENSG00000091972.18	ENST00000607597.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	111.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCCAGAAAACATGGTC	112332322	False	NA	NA	False	AAAAAG	-8	NA	112332346	112345075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112332702_112340901_112340984_112344961
WTC11_00065753	chr3	+	5721	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTCAGCGAAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	112417287	112423008	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112417300_112423000
WTC11_00065754	chr3	+	4602	20	FSM	ENSG00000144857.15	ENST00000495514.5	4646	20	44	0	-8	0	multi-exon	TRUE	canonical	1	3	junction_9	4.24720863196463	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCATGTGTGAGTCAG	113211276	True	NA	16	True	AATAAA	-28	NA	113211525	113287459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278097_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
WTC11_00065758	chr3	+	340	1	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAGTCACAGGGGATGCA	115798722	False	NA	NA	False	NA	NA	NA	115798776	115799116	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115798800_115799100
WTC11_00065760	chr3	+	3598	3	FSM	ENSG00000163389.12	ENST00000473648.1	3598	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGACAA	119488031	False	NA	NA	False	NA	NA	NA	119488042	119493146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119490719_119491517_119491575_119492281
WTC11_00065761	chr3	+	1294	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	-23	0	-18	0	multi-exon	FALSE	canonical	3	12	junction_4	217.227622552934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	119489203	True	NA	14	True	AATAAA	-21	NA	119498528	119524066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
WTC11_00065762	chr3	+	3632	5	FSM	ENSG00000144843.12	ENST00000357003.8	3623	5	-15	6	13	-6	multi-exon	FALSE	canonical	1	1	junction_1	6.57171971404746	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTATGAATTTGCCATTC	NA	False	NA	3	True	AATAAA	-14	NA	119579476	119589939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119579852_119580550_119580637_119582133_119582468_119586284_119586646_119587463
WTC11_00065765	chr3	+	873	1	FSM	ENSG00000244441.1	ENST00000496098.1	339	1	-382	-152	-382	152	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCACTTGGGAGGCTGAG	NA	False	NA	NA	False	AAAACA	-42	NA	120512467	120513340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120512500_120513300
WTC11_00065766	chr3	+	938	1	FSM	ENSG00000213371.4	ENST00000462291.1	880	1	21	-79	21	79	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTTTTTTCTTGGTAGA	NA	False	NA	NA	False	NA	NA	NA	120805886	120806824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120805900_120806800
WTC11_00065767	chr3	+	828	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-11	-128605	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTAGCTGGATTGGTT	120907196	True	NA	NA	False	AATAAA	-18	NA	120908224	120916841	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_120908335_120909570_120909768_120916320
WTC11_00065769	chr3	+	436	5	FSM	ENSG00000145087.13	ENST00000495504.5	479	5	43	0	43	0	multi-exon	FALSE	canonical	2	2	junction_1	6.49519052838329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAAGTTCAGATGATAC	120909122	False	NA	NA	False	NA	NA	NA	120909144	121045446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120909192_120909570_120909768_120954939_120955038_121041699_121041782_121045434
WTC11_00065770	chr3	+	5120	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	-1	328	-1	-328	multi-exon	FALSE	canonical	1	1	junction_1	3.20147358361364	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGCAATTGTAACAC	121894257	True	NA	NA	False	ATTAAA	-2	NA	121894399	121943860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
WTC11_00065772	chr3	+	430	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	27	814	27	-814	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATGGTAATTTATTAT	122514996	True	NA	NA	False	AATAAA	-18	NA	122515032	122517358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_122515129_122517024
WTC11_00065774	chr3	+	3845	6	FSM	ENSG00000121542.12	ENST00000309934.4	4228	6	383	0	383	0	multi-exon	FALSE	canonical	3	85	junction_1	9.81019877474458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGTTTTCTTTCATT	123207532	False	NA	12	True	TATAAA	-12	NA	123208704	123274130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
WTC11_00065776	chr3	+	1984	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	-74	0	-63	0	multi-exon	FALSE	canonical	2	8	junction_1	2.9474565306379	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	125916545	125930010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
WTC11_00065779	chr3	+	2046	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	57.5096513639233	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTGGTGTCTCTCTCT	128151561	True	NA	14	True	AATAAA	-21	NA	128153469	128408641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128358216_128358374_128408068
WTC11_00065780	chr3	+	329	2	FSM	ENSG00000250796.1	ENST00000505910.1	329	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGAGGCTGAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	128869623	128870026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128869796_128869869
WTC11_00065782	chr3	+	1720	7	NIC	ENSG00000183624.14	novel	1952	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	235.795815625864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	129275402	True	NA	45	True	AATAAA	-15	NA	129278879	129305293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
WTC11_00065783	chr3	+	3757	28	FSM	ENSG00000163913.14	ENST00000689801.1	3910	28	40	113	4	0	multi-exon	FALSE	canonical	3	14	junction_15	26.6097128424622	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	129440058	False	NA	16	True	AATAAA	-16	NA	129440155	129520349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00065786	chr3	+	1246	5	NIC	ENSG00000251287.8	novel	573	3	NA	NA	-1	716	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.08220700148449	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGAGGGCAGATTGTG	NA	False	NA	NA	False	NA	NA	NA	130093904	130099106	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_130093965_130094402_130094514_130096048_130096164_130097174_130097251_130098222
WTC11_00065787	chr3	+	1451	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	15	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	130112371	True	NA	13	True	AATACA	-16	NA	130112539	130120566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130112745_130119320
WTC11_00065789	chr3	+	4730	16	FSM	ENSG00000017260.20	ENST00000514654.5	4730	16	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_7	56.4322208986635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130962878	False	NA	17	True	AATAAA	-19	NA	130962901	131003150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
WTC11_00065790	chr3	+	709	1	FSM	ENSG00000248530.1	ENST00000508390.1	733	1	207	-183	207	183	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAAGTTACTCAGGGA	NA	False	NA	NA	False	NA	NA	NA	131526653	131527362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131526700_131527400
WTC11_00065792	chr3	+	1215	2	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	127	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGATAAGTCACACAC	NA	False	NA	NA	False	NA	NA	NA	132376880	132391327	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_132377363_132390594
WTC11_00065795	chr3	+	2027	13	FSM	ENSG00000182923.20	ENST00000683940.1	2005	13	-22	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	65.0209367990205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATCACTATCTTG	NA	False	NA	NA	False	NA	NA	NA	134485698	134561539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134559149_134559306_134561376
WTC11_00065796	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	49.9727198306509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	134485519	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
WTC11_00065797	chr3	+	8575	7	FSM	ENSG00000182923.20	ENST00000683138.1	8575	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	59.0865654969234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	NA	False	NA	NA	False	ATTAAA	-8	NA	134541568	134565022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00065798	chr3	+	4674	16	FSM	ENSG00000154928.19	ENST00000398015.8	4674	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	4.22479453806796	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCAGAGTGTGTATCC	134794423	True	NA	31	True	ATTAAA	-33	NA	134795259	135260467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134795690_134925815_134925881_134951370_134952053_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259011
WTC11_00065799	chr3	+	412	1	FSM	ENSG00000242222.1	ENST00000481235.1	277	1	1	-136	1	136	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTTATTCTACTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	135925891	135926303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_135925900_135926300
WTC11_00065802	chr3	+	1826	7	NIC	ENSG00000174564.13	novel	1787	7	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	4.02768199119819	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTACATTTTCAACCT	136969224	True	NA	23	True	AATAAA	-35	NA	136969264	137011087	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_136969379_136980465_136980593_136982159_136982351_136989440_136989566_136991937_136992089_136995413_136995557_137010112
WTC11_00065803	chr3	+	2020	1	FSM	ENSG00000168875.3	ENST00000306087.3	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTTTGATGTGCCTAA	137764273	True	NA	NA	False	AATAAA	-23	NA	137764314	137766334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_137764300_137766300
WTC11_00065804	chr3	+	4557	22	NIC	ENSG00000114098.18	novel	2777	22	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	106.224786257349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAACTTCTAAAAAGGA	138183933	True	NA	1	True	AATAAA	-15	NA	138187552	138298372	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_138187600_138188400_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
WTC11_00065807	chr3	+	4042	22	FSM	ENSG00000158220.14	ENST00000486831.5	4044	22	2	0	2	0	multi-exon	FALSE	canonical	2	8	junction_11	3.95209408023741	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTTGGATTTTT	138434019	True	NA	NA	False	TTTAAA	-12	NA	138434587	138477060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138471027_138472362_138473094_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
WTC11_00065808	chr3	+	995	3	FSM	ENSG00000206262.9	ENST00000470680.5	974	3	-21	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTGCAGAAGGACCAATG	138947053	True	NA	NA	False	NA	NA	NA	138947212	138950879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138947465_138949511_138949640_138950264
WTC11_00065809	chr3	+	843	3	FSM	ENSG00000248932.7	ENST00000504670.7	852	3	9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139389002	True	NA	NA	False	AATAAA	-16	NA	139389814	139444604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139390248_139423015_139423115_139444293
WTC11_00065810	chr3	+	1177	1	FSM	ENSG00000178631.7	ENST00000415794.1	1129	1	-84	36	-84	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTTGGGCCCCTCCG	NA	False	NA	NA	False	NA	NA	NA	139493724	139494901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139493700_139494900
WTC11_00065812	chr3	+	9163	7	NIC	ENSG00000114120.14	novel	1163	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_4	78.7155568416364	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	140935241	True	NA	9	True	ATTAAA	-10	NA	140941886	140979933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966347_140970994_140973715_140974006_140976259
WTC11_00065814	chr3	+	3758	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	-138	-460	-61	180	multi-exon	FALSE	canonical	2	4	junction_3	71.0742641214678	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATAGTCCTTGGTTT	141229951	True	NA	NA	False	NA	NA	NA	141231722	141295104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
WTC11_00065815	chr3	+	2177	19	ISM	ENSG00000155903.14	ENST00000286364.9	5638	24	27	28378	7	6521	5prime_fragment	FALSE	canonical	3	103	junction_2	13.791323985896	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCCTTCAGTGTGCT	141484637	True	NA	7	True	ATTAAA	-20	NA	141487053	141586966	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645
WTC11_00065816	chr3	+	575	5	FSM	ENSG00000120756.13	ENST00000461644.5	567	5	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.058639409634	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGGAGAAAATTCTATCA	142591821	True	NA	NA	False	NA	NA	NA	142596431	142669482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142596510_142597236_142597349_142619452_142619639_142664201_142664308_142669389
WTC11_00065818	chr3	+	3820	10	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-191	0	combination_of_known_splicesites	TRUE	canonical	3	17	junction_6	20.9820617094757	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	142724361	False	NA	NA	False	AATAAA	-21	NA	142724373	142807888	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142802168_142802345_142803976_142804179_142804435_142804631_142806007
WTC11_00065820	chr3	+	5635	12	NIC	ENSG00000163714.18	novel	7424	28	NA	NA	1853	-175	combination_of_known_junctions	FALSE	canonical	3	120	junction_11	186.04451613383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCCATGTAATTTTCT	143028381	False	NA	14	True	AATAAA	-27	NA	143028414	143060550	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
WTC11_00065821	chr3	+	4375	3	NIC	ENSG00000175040.6	novel	4142	2	NA	NA	59	8433	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	50.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTCATCAGAATCATCA	143118795	True	NA	NA	False	AATAAA	-23	NA	143119829	143132447	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_143120542_143120643_143123577_143131717
WTC11_00065823	chr3	+	11145	4	FSM	ENSG00000196428.13	ENST00000361875.8	11182	4	37	0	37	0	multi-exon	FALSE	canonical	2	10	junction_2	50.2062413118794	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTTTTCTTCTTGTC	150406558	True	NA	6	True	AATAAA	-18	NA	150408334	150466422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150411309_150423048_150423121_150457075_150457128_150458375
WTC11_00065824	chr3	+	1796	12	FSM	ENSG00000144895.12	ENST00000406576.7	1795	12	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	213.886584605908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGTGATATAGAAAAGAG	150537574	True	NA	24	True	ATTAAA	-35	NA	150546785	150584115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
WTC11_00065826	chr3	+	303	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	77	159	77	-7	multi-exon	FALSE	canonical	3	7	junction_1	7.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	150703340	False	NA	NA	False	TATAAA	-27	NA	150703562	150719988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150703668_150707931_150708010_150719868
WTC11_00065827	chr3	+	4184	2	Genic_Genomic	ENSG00000169860.7	novel	6309	1	NA	NA	11	-6	multi-exon	FALSE	canonical	3	16	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTGATGGCTTCTA	152831293	True	NA	3	True	AATAAA	-9	NA	152835141	152841433	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_+_152836944_152839051
WTC11_00065828	chr3	+	3035	5	FSM	ENSG00000114790.13	ENST00000483068.1	3106	5	71	0	71	0	multi-exon	FALSE	canonical	3	92	junction_1	8.25757228245687	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGGTGTGATT	NA	False	NA	9	True	TATAAA	-19	NA	154225855	154257827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_154226011_154240369_154240580_154253115_154253184_154254719_154254825_154255330
WTC11_00065829	chr3	+	2301	23	FSM	ENSG00000196549.13	ENST00000473730.6	2865	23	564	0	564	0	multi-exon	TRUE	canonical	1	1	junction_1	16.6232561379562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAAAAGAAGCATTGCA	155081897	False	NA	NA	False	NA	NA	NA	155081907	155180459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155081946_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
WTC11_00065830	chr3	+	1832	3	FSM	ENSG00000163661.4	ENST00000295927.4	1884	3	9	43	9	-43	multi-exon	FALSE	canonical	0	0	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTCATTTAATTATAAA	157436825	True	NA	NA	False	AATAAA	-19	NA	157436858	157443590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_157437064_157437512_157437915_157442365
WTC11_00065835	chr3	+	1364	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	-232	-132	-153	6	multi-exon	FALSE	canonical	3	14	junction_2	62.9567752950829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTTGCTCACTAACA	NA	False	NA	18	True	AATAAA	-26	NA	159839707	159897366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
WTC11_00065847	chr3	+	8045	7	NIC	ENSG00000136603.14	novel	7155	7	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_2	93.884089292181	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	170346512	True	NA	19	True	AATAAA	-21	NA	170357706	170396835	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_170358646_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
WTC11_00065851	chr3	+	2830	16	FSM	ENSG00000075420.13	ENST00000469491.5	2916	16	0	86	0	-86	multi-exon	TRUE	canonical	3	100	junction_6	13.8749974974973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCGGAGGTTGCAGTG	172034824	True	NA	NA	False	NA	NA	NA	172039658	172338238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329
WTC11_00065853	chr3	+	4067	25	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	94.0336819088423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	172736385	True	NA	17	True	AATAAA	-19	NA	172750706	172821473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764414_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
WTC11_00065860	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	379.954191317848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	179590190	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
WTC11_00065861	chr3	+	681	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	-10	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.951162470213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	179590219	True	NA	-8	True	AATAAA	-3	NA	179604815	179624091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
WTC11_00065864	chr3	+	1990	15	FSM	ENSG00000114416.18	ENST00000468861.5	1989	15	-1	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	162.014549611182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	180885710	True	NA	16	True	ATTAAA	-16	NA	180912669	180976545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
WTC11_00065868	chr3	+	3819	9	NIC	ENSG00000114796.16	novel	7380	9	NA	NA	-4	-3532	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	31.6324101990348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTCTCATTTTAGA	183632133	True	NA	9	True	AATAAA	-22	NA	183635605	183680945	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635748_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
WTC11_00065870	chr3	+	7256	7	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	30.3996527757948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	183632162	True	NA	9	True	ATTAAA	-17	NA	183635634	183684519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635794_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
WTC11_00065871	chr3	+	1230	3	NNC	ENSG00000114796.16	novel	587	3	NA	NA	5	1085	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAGTGTGTTGAAAATG	183632175	True	NA	27	True	AATAAA	-24	NA	183635647	183637535	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_183635794_183636220_183636312_183636542
WTC11_00065872	chr3	+	1546	4	NIC	ENSG00000114796.16	novel	574	4	NA	NA	6	2147	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.41629792788369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTACTGCTCATGTGTGGG	183632176	True	NA	NA	False	ATTAAA	-18	NA	183635648	183645378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635748_183636220_183636312_183643479_183643543_183644085
WTC11_00065875	chr3	+	2292	15	FSM	ENSG00000161202.20	ENST00000431765.6	2289	15	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	141.344996951662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGCGCTAACTGCTCG	184155351	False	NA	11	True	AATAAA	-12	NA	184155561	184170873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166876_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
WTC11_00065879	chr3	+	5464	33	NIC	ENSG00000114867.22	novel	5405	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_14	388.153596973865	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279512	True	NA	19	True	ATTAAA	-16	NA	184314549	184335353	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00065880	chr3	+	2344	5	NIC	ENSG00000175182.15	novel	2421	6	NA	NA	4	-4	intron_retention	FALSE	canonical	3	26	junction_1	26.5612499705869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTATATACATCTGGTCA	184334434	True	NA	18	True	ATTAAA	-23	NA	184335948	184346269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184336124_184341723_184341818_184342065_184342249_184342743_184342861_184344494
WTC11_00065881	chr3	+	1392	6	NIC	ENSG00000163882.10	novel	1807	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	375.547387156401	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCTCCCCTTTTTGTA	184361110	True	NA	18	True	ATTAAA	-16	NA	184361718	184368538	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184362147_184363225_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
WTC11_00065918	chr3	+	2118	14	NIC	ENSG00000242086.8	novel	4208	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_13	41.8642494810953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	195655847	True	NA	15	True	AATAAA	-16	NA	195658070	195686140	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195685817
WTC11_00065921	chr3	+	2952	3	FSM	ENSG00000242086.8_ENSG00000207650.1	ENST00000628823.2	616	3	-256	-2080	-256	-13	multi-exon	FALSE	canonical	2	4	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTTTCCAGGATGTC	NA	False	NA	61	True	NA	NA	NA	195689080	195701394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195689439_195696360_195696590_195699029
WTC11_00065927	chr3	+	3110	7	NIC	ENSG00000163964.18	novel	953	7	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	58.5481757947153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTGATATAACTCTTC	196710753	False	NA	6	True	AATAAA	-15	NA	196712418	196736004	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_196712645_196716857_196716922_196722414_196722557_196726654_196726772_196727922_196728137_196730991_196731093_196733758
WTC11_00065943	chr3	-	2519	4	FSM	ENSG00000227110.7	ENST00000452802.6	2519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACAGCCTACCAAGATT	-8501540	True	NA	NA	False	AATAAA	-37	NA	8501666	8193136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8195074_8494680_8494767_8498549_8498850_8501470
WTC11_00065946	chr3	-	2098	3	FSM	ENSG00000206573.10	ENST00000660363.1	2098	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395523	False	NA	-30	True	TATAAA	-37	NA	9395579	9388873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391426_9391827_9395505
WTC11_00065948	chr3	-	1609	3	ISM	ENSG00000206573.10	ENST00000481221.7	1897	4	1892	240	-3	-159	3prime_fragment	FALSE	canonical	3	33	junction_2	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCCCTTGCTTTGGGA	-9395526	False	NA	24	True	NA	NA	NA	9395582	9389113	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_9390498_9391678_9391827_9395505
WTC11_00065949	chr3	-	4909	5	NNC	ENSG00000156959.9	novel	4900	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.4785582929485	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGCCACTTCTCTGA	-9552471	True	NA	0	True	AATAAA	-22	NA	9553822	9498359	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9502312_9503765_9503859_9505966_9506204_9552273_9552763_9553684
WTC11_00065951	chr3	-	1008	2	FSM	ENSG00000156990.14	ENST00000466141.1	996	2	0	-12	0	0	multi-exon	FALSE	canonical	3	612	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGACTTGTGATAATAAA	-9832333	False	NA	-46	True	NA	NA	NA	9839713	9837881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9839031
WTC11_00065952	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.4550764583437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951089	True	NA	-7	True	AATAAA	-15	NA	9952374	9945541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
WTC11_00065953	chr3	-	1400	9	Fusion	ENSG00000125037.13_ENSG00000163704.12	novel	1584	9	NA	NA	-13	0	multi-exon	FALSE	non_canonical	0	0	junction_1	143.985622112071	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9984675	True	NA	-7	True	AATAAA	-15	NA	9986856	9945541	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_9945853_9963960_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
WTC11_00065955	chr3	-	3251	18	FSM	ENSG00000132155.14	ENST00000442415.7	3251	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	126.226577189304	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12603477_12603538_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
WTC11_00065957	chr3	-	1279	1	FSM	ENSG00000213943.3	ENST00000396959.2	1279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCCAGCAGAAGCAGGGT	-12788543	False	NA	NA	False	NA	NA	NA	12788671	12787392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12787400_12788700
WTC11_00065958	chr3	-	567	4	FSM	ENSG00000144713.13	ENST00000273223.10	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6787.9220842775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCATCTTCCTTCCTTG	-12641203	True	NA	-32	True	AATAAA	-15	NA	12841546	12836046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839585_12840141_12840243_12841493
WTC11_00065959	chr3	-	439	3	FSM	ENSG00000144713.13	ENST00000434963.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8698	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAACAAAGCACAT	-12640539	False	NA	NA	False	NA	NA	NA	12840882	12839440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12839531_12840141_12840243_12840634
WTC11_00065961	chr3	-	7406	14	NIC	ENSG00000144711.16	novel	7700	14	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	26.5238532815164	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTCTCACTTTTTCTG	-12966376	True	NA	-5	True	AATAAA	-14	NA	12967708	12897220	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_12901523_12902772_12902823_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_12967386
WTC11_00065962	chr3	-	7334	14	NIC	ENSG00000144711.16	novel	7700	14	NA	NA	54	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_13	31.904999515481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTCTCACTTTTTCTG	-12994013	True	NA	-5	True	AATAAA	-14	NA	12994330	12897220	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_12901523_12902772_12902823_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_12994080
WTC11_00065964	chr3	-	820	3	FSM	ENSG00000154767.15	ENST00000427795.2	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	3.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTACATTCACAGTTTC	NA	False	NA	NA	False	NA	NA	NA	14148928	14147466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14148002_14148561_14148732_14148813
WTC11_00065965	chr3	-	4284	12	FSM	ENSG00000144596.13	ENST00000430219.2	4284	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.46382677258719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGAGTAGAAGTTTGCT	NA	False	NA	-4	True	AATAAA	-14	NA	14513678	14491169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14493827_14494842_14494990_14496416_14496561_14503565_14503954_14505614_14505790_14506800_14506981_14507560_14507701_14509819_14509965_14511164_14511311_14511412_14511480_14512776_14512858_14513664
WTC11_00065966	chr3	-	5779	24	NNC	ENSG00000144596.13	novel	7724	24	NA	NA	-47044	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	12.0188887256842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGAGTAGAAGTTTGCT	-14603106	False	NA	-4	True	AATAAA	-14	NA	14603119	14491169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14493827_14494842_14494990_14496416_14496561_14503565_14503672_14505614_14505790_14506800_14506981_14507560_14507701_14509819_14509965_14511164_14511311_14511412_14511480_14512776_14512858_14513664_14513811_14514291_14514479_14517063_14517214_14517771_14517898_14520109_14520280_14520389_14520538_14521641_14521788_14522999_14523076_14523611_14523699_14524392_14524539_14525436_14525573_14525850_14525932_14602927
WTC11_00065967	chr3	-	424	4	FSM	ENSG00000144596.13	ENST00000637939.1	526	4	102	0	102	0	multi-exon	FALSE	canonical	1	1	junction_3	25.3902868567227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGCCCTTGGACGGGG	NA	False	NA	NA	False	NA	NA	NA	14555954	14524392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14524539_14525436_14525573_14525850_14525932_14555893
WTC11_00065968	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	85.8286406484197	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-15424917	True	NA	1	True	AATAAA	-21	NA	15427518	15381274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00065969	chr3	-	1098	7	NIC	ENSG00000206562.12	novel	4020	7	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	76.6523537364205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTTCAGAGCAAATT	-15424911	True	NA	-15	True	AATAAA	-25	NA	15427512	15411333	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00065970	chr3	-	953	6	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	87.6378913484344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCCTTCAGAGCAA	-15424911	True	NA	-18	True	AATAAA	-22	NA	15427512	15411336	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15411438_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00065971	chr3	-	997	5	NIC	ENSG00000206562.12	novel	880	5	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	74.7374571416502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTTGAGATTACTTT	-15424916	True	NA	-39	True	AATAAA	-16	NA	15427517	15413670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15426286_15426636_15427401
WTC11_00065973	chr3	-	1881	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	-1	0	0	multi-exon	FALSE	canonical	3	36	junction_13	62.5223871016525	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	-15596573	True	NA	71	True	AATAAA	-18	NA	15601569	15560745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
WTC11_00065976	chr3	-	574	2	FSM	ENSG00000206560.12	ENST00000479043.1	588	2	14	0	14	0	multi-exon	FALSE	canonical	3	245	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAATCAAAATTTTTAA	-15677566	False	NA	NA	False	NA	NA	NA	15677592	15676595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15677057_15677479
WTC11_00065978	chr3	-	1458	1	FSM	ENSG00000224039.1	ENST00000419017.1	1458	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTAAGCTGCCAGCTGAT	-16693863	False	NA	NA	False	NA	NA	NA	16694202	16692744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16692700_16694200
WTC11_00065979	chr3	-	6412	22	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	0	2	combination_of_known_junctions	TRUE	canonical	2	36	junction_20	15.5322793137476	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTGACTTATTCCAGG	-17739524	True	NA	4	True	AATAAA	-23	NA	17742601	17157159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17623848_17623914_17742480
WTC11_00065980	chr3	-	6741	24	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	27.3585725757713	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCTTGACTTATTCCA	-17739526	True	NA	2	True	AATAAA	-21	NA	17742603	17157161	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17562018_17562143_17586352_17586558_17623848_17623914_17742480
WTC11_00065981	chr3	-	6895	23	NNC	ENSG00000131374.14	novel	7854	22	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	25.1941223632198	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCTTGACTTATTCCA	-17742762	True	NA	2	True	AATAAA	-21	NA	17742885	17157161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508602_17586352_17586558_17623848_17623914_17742480
WTC11_00065982	chr3	-	2855	1	FSM	ENSG00000214286.2	ENST00000417487.1	715	1	-43	-2097	-43	2097	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCACGTTGGAAGCCCCA	NA	False	NA	NA	False	AATACA	-37	NA	17878212	17875357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17875400_17878200
WTC11_00065983	chr3	-	4589	12	FSM	ENSG00000182568.17	ENST00000417717.6	4589	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	24.0986265511728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTAGGGTTTGTCTGC	-18424549	False	NA	-6	True	ATTAAA	-18	NA	18424573	18347939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_18349683_18351312_18351409_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
WTC11_00065984	chr3	-	442	1	FSM	ENSG00000182568.17	ENST00000606296.1	4200	1	1205	2553	-348	365	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCATCTCTGTTTGTCT	-18351865	False	NA	NA	False	NA	NA	NA	18351879	18351437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_18351400_18351900
WTC11_00065985	chr3	-	2488	7	ISM	ENSG00000129810.15	ENST00000306698.6	1531	8	64	8476	0	412	5prime_fragment	FALSE	canonical	3	51	junction_2	73.8782782690555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCACAGTCTCTTAATT	-20179665	True	NA	NA	False	NA	NA	NA	20186127	20169068	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
WTC11_00065986	chr3	-	980	2	FSM	ENSG00000129810.15	ENST00000460637.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATAAGCTTCTGGCATC	-20171254	False	NA	NA	False	AATGAA	-27	NA	20171267	20170060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042
WTC11_00065987	chr3	-	2541	8	NNC	ENSG00000129810.15	novel	3070	8	NA	NA	1	-3	intron_retention	FALSE	canonical	2	14	junction_7	77.9704287220613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGAGCTTAAGCATTAT	-20179728	True	NA	17	True	AATAAA	-30	NA	20186190	20170487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185456
WTC11_00065988	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	-23806873	True	NA	NA	False	AATAAA	-23	NA	23806905	23804023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_23804715_23806818
WTC11_00065989	chr3	-	6266	10	FSM	ENSG00000151090.20	ENST00000396671.7	7402	10	70	1066	-1	-5	multi-exon	FALSE	canonical	0	0	junction_8	4.17517649512354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATATATTTTCCTGTCT	-24494369	True	NA	-8	True	GATAAA	-38	NA	24494752	24118218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_24123126_24127498_24127758_24133315_24133463_24143500_24143707_24146674_24146823_24152389_24152491_24190073_24190335_24228937_24229002_24337299_24337372_24494651
WTC11_00065991	chr3	-	648	6	FSM	ENSG00000163491.17	ENST00000435584.5	652	6	0	4	0	-4	multi-exon	TRUE	canonical	2	3	junction_4	1.32664991614216	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTCAAGTAATCATA	NA	False	NA	NA	False	AATAAA	-18	NA	27290728	27255115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27255305_27256295_27256372_27284601_27284705_27284839_27284962_27287697_27287744_27290616
WTC11_00065992	chr3	-	7372	24	FSM	ENSG00000033867.17	ENST00000428386.5	7385	24	17	-4	17	2	multi-exon	FALSE	canonical	1	1	junction_23	51.5262702098564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTATTGTCTTTACTTT	NA	False	NA	-5	True	AATAAA	-19	NA	27456737	27372718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27456650
WTC11_00065993	chr3	-	2436	17	NNC	ENSG00000170266.16	novel	2523	16	NA	NA	0	3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.404855645981	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGATGTGGTGGTGC	-33093433	True	NA	NA	False	NA	NA	NA	33097146	32993522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32993550_32996730_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
WTC11_00065995	chr3	-	6189	35	NIC	ENSG00000163539.18	novel	7159	39	NA	NA	0	-19	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	40.2164666132072	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTACTTGAAAAAGTTA	-33714129	True	NA	NA	False	AATAAA	-10	NA	33718213	33497011	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33498718_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
WTC11_00065996	chr3	-	486	2	FSM	ENSG00000163539.18	ENST00000493577.1	875	2	0	389	0	-389	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGAAATAGTAACTTT	-33559330	False	NA	NA	False	TTTAAA	-31	NA	33559341	33558724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33559176_33559306
WTC11_00065997	chr3	-	9285	15	ISM	ENSG00000168016.15	ENST00000645898.2	10611	24	80577	0	-6845	0	3prime_fragment	FALSE	canonical	2	5	junction_13	4.43145067692746	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTTTTATTTCC	NA	False	NA	-5	True	TATAAA	-19	NA	36864477	36826818	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_36828376_36829563_36829663_36830872_36833920_36834761_36834908_36838371_36838505_36838612_36838717_36842621_36842711_36846247_36846405_36847199_36847347_36851718_36851857_36852145_36852346_36855172_36858050_36858717_36858895_36860905_36861161_36864318
WTC11_00065998	chr3	-	299	1	FSM	ENSG00000272334.1	ENST00000607089.1	556	1	11	246	11	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTATCTGCTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	36973661	36973362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36973400_36973700
WTC11_00066000	chr3	-	2380	5	FSM	ENSG00000093167.18	ENST00000460646.5	2857	5	477	0	477	0	multi-exon	FALSE	canonical	3	144	junction_4	14.8996644257513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	NA	False	NA	0	True	ATTAAA	-23	NA	37064857	37053003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741
WTC11_00066001	chr3	-	687	2	FSM	ENSG00000187091.14	ENST00000417185.6	685	2	0	-2	0	2	multi-exon	FALSE	canonical	3	93	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTCTCTTTACCTGG	-38008321	False	NA	1	True	TATAAA	-20	NA	38008335	38007493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38007859_38008013
WTC11_00066002	chr3	-	2501	14	NIC	ENSG00000187091.14	novel	2651	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	22.382897105608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTCTCTTTACCT	-38028815	True	NA	-1	True	TATAAA	-18	NA	38029642	38007495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
WTC11_00066003	chr3	-	1591	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	56.3173152769199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGTGGTTTTTTTC	-38132904	True	NA	-4	True	AGTAAA	-18	NA	38137059	38122711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
WTC11_00066005	chr3	-	1244	1	FSM	ENSG00000232439.1	ENST00000435924.1	524	1	-409	-311	-409	311	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGAAAAAATTGAACAG	NA	False	NA	NA	False	NA	NA	NA	38527734	38526490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38526500_38527700
WTC11_00066006	chr3	-	8190	26	FSM	ENSG00000183873.18	ENST00000450102.6	6284	26	0	-1906	0	0	multi-exon	TRUE	canonical	2	4	junction_10	5.34355686785497	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTAGGCTCTGTCCT	NA	False	NA	-7	True	AATAAA	-41	NA	38633349	38548061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38551559_38554278_38554550_38555655_38555761_38556440_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660_38576782_38580930_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034
WTC11_00066007	chr3	-	8337	27	NIC	ENSG00000183873.18	novel	8519	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	9.13645730417463	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTAGGCTCTGTCCT	-38648284	True	NA	-7	True	AATAAA	-41	NA	38649667	38548061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_38551559_38554278_38554550_38555655_38555761_38556440_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660_38576782_38580930_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
WTC11_00066008	chr3	-	8519	28	FSM	ENSG00000183873.18	ENST00000413689.6	8519	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	9.16649831495237	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTAGGCTCTGTCCT	-38648304	True	NA	-7	True	AATAAA	-41	NA	38649687	38548061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38551559_38554278_38554550_38555655_38555761_38556440_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660_38576782_38579333_38579496_38580930_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
WTC11_00066009	chr3	-	532	2	FSM	ENSG00000114745.14	ENST00000469471.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGGGCAGCACTGGAAT	-39105213	True	NA	NA	False	NA	NA	NA	39107630	39103173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39103554_39107478
WTC11_00066010	chr3	-	724	4	FSM	ENSG00000287780.1	ENST00000655387.1	764	4	26	14	26	-14	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAACTGTTATTATCT	-39384099	True	NA	NA	False	AATAAA	-16	NA	39384274	39292569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39292951_39380903_39381121_39382952_39383045_39384240
WTC11_00066011	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	-40309324	True	NA	NA	False	TATAAA	-17	NA	40309542	40173144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_40174723_40301236_40301397_40309322
WTC11_00066013	chr3	-	452	5	FSM	ENSG00000168038.11	ENST00000431379.5	465	5	13	0	-12	0	multi-exon	FALSE	canonical	1	1	junction_1	15.0748134316813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTGTGAGAGAATTTG	-41960085	True	NA	NA	False	AAAACA	-30	NA	41962089	41935894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_41935941_41937294_41937341_41938097_41938198_41954621_41954808_41962015
WTC11_00066015	chr3	-	6488	8	NIC	ENSG00000093183.14	novel	1446	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	75.8860585190127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-42579802	True	NA	-24	True	AATAAA	-16	NA	42581901	42547970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
WTC11_00066016	chr3	-	2534	3	FSM	ENSG00000144647.7	ENST00000441964.1	2531	3	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTCTTCTTATTGGAT	-43104832	False	NA	0	True	ATTAAA	-18	NA	43105939	43079228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43081537_43090487_43090610_43105835
WTC11_00066017	chr3	-	387	1	FSM	ENSG00000280435.1	ENST00000624016.1	1670	1	1230	53	1230	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATCTCTGCTCACTGCA	-44116246	False	NA	NA	False	TTTAAA	-38	NA	44116257	44115870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44115900_44116300
WTC11_00066018	chr3	-	10128	7	NIC	ENSG00000185219.18	novel	18314	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	11.29035970296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCTGCAGTGTCATC	-44474370	True	NA	0	True	AGTAAA	-16	NA	44477670	44439769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44448740_44449512_44449624_44450446_44450574_44450867_44450963_44451313_44451483_44455120_44455697_44477590
WTC11_00066019	chr3	-	1751	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	33	3076	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	13.6633634219397	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTGATTTTATTTTT	-44506590	True	NA	-9	True	AATAAA	-14	NA	44510603	44491770	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
WTC11_00066020	chr3	-	2088	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	24	3076	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	12.7104506432917	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTGATTTTATTTTT	-44506599	True	NA	-9	True	AATAAA	-14	NA	44510612	44491770	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_44492508_44499473_44500638_44502541_44502669_44510552
WTC11_00066021	chr3	-	2200	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	6	3078	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	13.1790553530972	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGATTTTATTTTTTT	-44506617	True	NA	-7	True	AATAAA	-16	NA	44510630	44491768	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_44492508_44499473_44500638_44502541_44502669_44502964_44503057_44510552
WTC11_00066022	chr3	-	5925	9	NNC	ENSG00000163814.8	novel	5963	9	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	32.1497958780456	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGCCACCACTGGTTTT	-45145577	True	NA	-11	True	AATAAA	-16	NA	45146352	45082285	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118619_45146205
WTC11_00066023	chr3	-	1846	2	Genic_Genomic	ENSG00000249992.2	novel	1822	1	NA	NA	0	17460	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGCCTCGTGAAGGCA	-45225617	True	NA	NA	False	NA	NA	NA	45226287	45207005	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_45207030_45224465
WTC11_00066024	chr3	-	1847	2	Genic_Genomic	ENSG00000249992.2	novel	1822	1	NA	NA	0	17460	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGCCTCGTGAAGGCA	-45225617	True	NA	NA	False	NA	NA	NA	45226287	45207005	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_45207031_45224465
WTC11_00066025	chr3	-	4318	7	FSM	ENSG00000163820.16	ENST00000433878.5	4317	7	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.6218778278017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCTCTCATTTTT	-45958561	False	NA	-1	True	AATAAA	-20	NA	45958572	45917902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45919066_45919412_45921841_45923655_45923766_45931070_45931282_45936447_45936544_45955248_45955394_45958407
WTC11_00066026	chr3	-	4912	26	FSM	ENSG00000178038.17	ENST00000318962.9	4913	26	0	1	0	-1	multi-exon	FALSE	canonical	2	11	junction_7	5.00623611109185	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGGGGGCTGCAGTGTT	-46693173	True	NA	NA	False	AATAAA	-40	NA	46693679	46668995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46671065_46671487_46671585_46671883_46672034_46672139_46672202_46673338_46673382_46674565_46674740_46675617_46675687_46676244_46676403_46676641_46676739_46676848_46677023_46678258_46678390_46679209_46679288_46680429_46680542_46681245_46681408_46681499_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
WTC11_00066027	chr3	-	1332	6	FSM	ENSG00000283706.2	ENST00000315170.13	1332	6	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	4.01995024844836	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCTTCCCCGGCCTC	NA	False	NA	-8	True	ATTAAA	-18	NA	46717869	46712116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46712483_46712900_46713068_46714217_46714502_46715534_46715698_46717436_46717638_46717718
WTC11_00066028	chr3	-	4573	8	NIC	ENSG00000206549.13	novel	2960	11	NA	NA	14	-2	intron_retention	FALSE	canonical	1	4	junction_6	6.70668262531743	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCTTCCCCGGCCTC	-46812153	True	NA	-8	True	ATTAAA	-18	NA	46812560	46712116	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_46712483_46712900_46713068_46714217_46714502_46715534_46715698_46717436_46717638_46717718_46720004_46811105_46811874_46812221
WTC11_00066030	chr3	-	1101	4	ISM	ENSG00000088727.14	ENST00000265529.7	3311	22	-63	46832	-63	1	5prime_fragment	FALSE	canonical	1	4	junction_3	41.2148840428633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGTTTGTCTGTCTCC	-47283464	False	NA	-3	True	AATAAA	-23	NA	47283514	47275226	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_47275491_47277281_47277380_47282494_47283120_47283400
WTC11_00066032	chr3	-	3346	17	NIC	ENSG00000114650.21	novel	3430	18	NA	NA	0	-3	combination_of_known_junctions	TRUE	canonical	3	63	junction_14	124.290926358282	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTGTCTCTTGGAAT	-47470259	True	NA	-2	True	ATTAAA	-45	NA	47475937	47413683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47435007_47435138_47442871_47443092_47475798
WTC11_00066033	chr3	-	1547	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	92.6146436705461	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGGGTTGTCTTGTT	-47513336	False	1465	1	True	AATAAA	-21	NA	47513360	47495637	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
WTC11_00066035	chr3	-	557	5	FSM	ENSG00000163832.16	ENST00000414236.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	111.905093717846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGGCGGTGGCTGTGCT	-47513318	False	1465	NA	False	NA	NA	NA	47513342	47501715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
WTC11_00066036	chr3	-	5975	20	NNC	ENSG00000047849.22	novel	8920	21	NA	NA	0	17820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.82580736273	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAGTTTGAGACCAGC	-48074672	True	NA	NA	False	NA	NA	NA	48088839	47832869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47832963_47850694_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00066037	chr3	-	6080	20	NNC	ENSG00000047849.22	novel	8920	21	NA	NA	-148	17820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.868038252323	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAGTTTGAGACCAGC	-48088978	False	NA	NA	False	NA	NA	NA	48088989	47832869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47832963_47850694_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870857_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00066038	chr3	-	5851	17	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-148	21	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	114.704630873169	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATCTACCACCTCCCTG	-48088978	False	NA	7	True	NA	NA	NA	48088989	47850668	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00066039	chr3	-	6038	18	NNC	ENSG00000047849.22	novel	5142	19	NA	NA	4	21	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	174.301889803087	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATCTACCACCTCCCTG	-48088983	True	NA	7	True	NA	NA	NA	48089268	47850668	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47852939_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875826_47877416_47877524_47914816_47914940_47915950_47917175_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
WTC11_00066040	chr3	-	5934	18	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-120	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_16	126.746620792639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGGCTTCGTGCTTCTG	-48074794	True	NA	-20	True	AATAAA	-23	NA	48088961	47850695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
WTC11_00066041	chr3	-	3567	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_9	92.3825233052491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183163	True	NA	30	True	NA	NA	NA	48188417	48157145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
WTC11_00066042	chr3	-	3594	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_9	84.2096509084466	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183187	True	NA	30	True	NA	NA	NA	48188441	48157145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
WTC11_00066043	chr3	-	3789	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	9	-28	intron_retention	FALSE	canonical	3	98	junction_11	60.2698438825973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTAGTTCTTGATGGA	-48183139	True	NA	2	True	AATAAA	-20	NA	48188393	48157173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
WTC11_00066044	chr3	-	1671	1	FSM	ENSG00000229759.1	ENST00000414458.1	589	1	-220	-862	-220	862	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAACTCTTGGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	48257158	48255487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48255500_48257200
WTC11_00066045	chr3	-	3792	5	FSM	ENSG00000172113.10	ENST00000426689.6	1209	5	-903	-1680	-903	0	multi-exon	FALSE	canonical	3	89	junction_3	28.8649874415355	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	-48299417	False	NA	NA	False	AATAAA	-21	NA	48299427	48292316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426
WTC11_00066046	chr3	-	2254	3	FSM	ENSG00000172113.10	ENST00000643011.1	2254	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	72.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGAGTTCCAGACCA	-48299671	True	NA	NA	False	NA	NA	NA	48301367	48292782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48301295
WTC11_00066048	chr3	-	7157	38	NIC	ENSG00000164050.13	novel	7308	38	NA	NA	117	0	intron_retention	TRUE	canonical	0	0	junction_18	93.560346029501	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-48429336	False	NA	-7	True	ATTAAA	-16	NA	48429346	48403853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415211_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
WTC11_00066049	chr3	-	6900	39	NNC	ENSG00000164050.13	novel	7308	38	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_28	96.1827129266376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-48429588	False	NA	-7	True	ATTAAA	-16	NA	48429598	48403853	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48419675_48420223_48420258_48420664_48420774_48420847_48420957_48421223_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
WTC11_00066050	chr3	-	3264	16	FSM	ENSG00000164050.13	ENST00000485535.5	3264	16	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_15	50.4616906397539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	-48413972	False	18	-9	True	ATTAAA	-14	NA	48414006	48403855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413819_48413894
WTC11_00066052	chr3	-	1391	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	-6	0	0	multi-exon	FALSE	canonical	2	15	junction_3	125.158566093842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-48435167	True	NA	4	True	ATTAAA	-35	NA	48440119	48432163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
WTC11_00066054	chr3	-	3749	15	NIC	ENSG00000114268.12	novel	1757	15	NA	NA	5	59	combination_of_known_junctions	FALSE	canonical	3	34	junction_8	24.9869353618148	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGACACCTGGTGCTG	-48556884	False	NA	41	True	NA	NA	NA	48556918	48517624	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48536744_48536821_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
WTC11_00066056	chr3	-	4640	75	ISM	ENSG00000114270.18	ENST00000328333.12	9276	118	12624	0	1877	0	3prime_fragment	TRUE	canonical	2	5	junction_52	10.9033622788872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTGACTGTTTGGG	NA	False	NA	-1	True	ATTAAA	-19	NA	48582643	48564072	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_48564423_48564782_48564981_48565108_48565202_48565409_48565497_48565635_48565669_48566266_48566316_48566509_48566564_48566659_48566738_48566906_48567024_48567127_48567191_48567573_48567637_48567709_48567764_48567837_48567892_48568089_48568171_48568498_48568535_48568783_48568856_48569374_48569447_48569591_48569649_48569724_48569761_48569879_48569916_48570133_48570179_48570274_48570335_48570464_48570501_48570638_48570711_48570860_48570969_48571100_48571161_48571242_48571279_48572000_48572046_48572126_48572172_48572379_48572422_48572502_48572539_48572670_48572740_48572861_48572943_48573020_48573057_48573173_48573237_48573315_48573349_48573512_48573558_48573689_48573726_48573854_48573891_48574261_48574307_48574487_48574551_48574676_48574722_48574796_48574866_48575063_48575127_48575206_48575243_48575338_48575540_48575625_48575749_48575866_48575903_48576248_48576297_48576399_48576436_48576521_48576558_48576675_48576772_48576883_48576920_48576991_48577028_48578320_48578366_48578452_48578516_48578918_48578955_48579196_48579278_48579368_48579405_48579479_48579516_48579587_48579669_48579784_48579815_48580030_48580058_48580299_48580345_48580580_48580653_48580881_48580927_48581121_48581158_48581259_48581341_48581447_48581484_48581572_48581633_48581705_48581760_48581910_48581944_48582322_48582359_48582477_48582514_48582608
WTC11_00066061	chr3	-	1318	5	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	100.40667308501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGAAGAATTACATAAAA	-48702835	True	NA	-49	True	ATTAAA	-44	NA	48717203	48693496	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48694458_48694526_48694693_48694825_48695089_48695419_48717156
WTC11_00066062	chr3	-	1563	10	NNC	ENSG00000178537.10	novel	1383	10	NA	NA	3	-48	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.85027165843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGAGAGCTCACTATTTT	-48898378	True	NA	-55	True	NA	NA	NA	48898879	48856978	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48857490_48857648_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
WTC11_00066064	chr3	-	504	2	NNC	ENSG00000235236.1	novel	520	2	NA	NA	-6833	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATGGTACTAGA	-48990644	False	NA	NA	False	AATAAA	-31	NA	48990818	48979922	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48980347_48990738
WTC11_00066065	chr3	-	654	5	FSM	ENSG00000178149.17	ENST00000438585.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	61.5751573282602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016419	False	NA	-4	True	AATAAA	-21	NA	49016511	49015487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015818_49015873_49015972_49016087_49016157_49016341_49016428
WTC11_00066066	chr3	-	1645	11	ISM	ENSG00000178149.17	ENST00000341949.9	1748	12	17	167	1	-78	intron_retention	FALSE	canonical	3	108	junction_3	30.0373101325668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGCGTGAGGTGCTCC	-49016719	True	NA	NA	False	NA	NA	NA	49018563	49015654	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
WTC11_00066068	chr3	-	203	1	FSM	ENSG00000207605.3	ENST00000384873.3	92	1	-136	25	-136	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	723	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCGTCCCCTGCTCTCC	-48976963	False	NA	NA	False	NA	NA	NA	49020845	49020642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49020600_49020800
WTC11_00066069	chr3	-	294	1	Antisense	novelGene_ENSG00000178057.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCCGCGCGACCGTTGG	-48978052	False	NA	NA	False	NA	NA	NA	49021934	49021640	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_49021600_49021900
WTC11_00066070	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	262.938152846296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
WTC11_00066071	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	777.639760389588	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985544	True	NA	32	True	AATAAA	-18	NA	49029426	49024324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
WTC11_00066073	chr3	-	3942	24	NIC	ENSG00000172046.20	novel	4384	26	NA	NA	-263	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_21	83.3603333701595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49113628	False	NA	-18	True	AATAAA	-20	NA	49117974	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946
WTC11_00066074	chr3	-	4830	27	NIC	ENSG00000172046.20	novel	4719	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_17	60.9585172752944	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-49116592	True	NA	-22	True	AATAAA	-16	NA	49120938	49108049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066075	chr3	-	4698	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	74.0970896744592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49116450	True	NA	-18	True	AATAAA	-20	NA	49120796	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066076	chr3	-	4395	26	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_21	77.8187021223048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49116450	True	NA	-18	True	AATAAA	-20	NA	49120796	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066077	chr3	-	4701	27	NNC	ENSG00000172046.20	novel	4721	27	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_22	85.919013745951	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49116450	True	NA	-18	True	AATAAA	-20	NA	49120796	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117359_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066078	chr3	-	4739	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	71.4642294765329	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-49116485	True	NA	-18	True	AATAAA	-20	NA	49120831	49108045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066079	chr3	-	4711	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	78.2162833574219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-49116587	True	NA	-38	True	TATAAA	-18	NA	49120933	49108130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
WTC11_00066081	chr3	-	4702	27	NNC	ENSG00000172046.20	novel	4721	27	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_22	81.6635832449346	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-49116587	True	NA	-38	True	TATAAA	-18	NA	49120933	49108130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117359_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
WTC11_00066082	chr3	-	4725	27	FSM	ENSG00000172046.20	ENST00000692912.1	4755	27	27	3	11	-1	multi-exon	FALSE	canonical	3	56	junction_1	74.3459548725898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCGTCTCTCTGTCTC	-49116450	True	NA	-4	True	AATAAA	-18	NA	49120796	49108675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
WTC11_00066083	chr3	-	4683	27	NNC	ENSG00000172046.20	novel	4665	27	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_22	94.8436037463657	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCGTCTCTCTGTCTC	-49116462	True	NA	-4	True	AATAAA	-18	NA	49120808	49108675	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117359_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
WTC11_00066086	chr3	-	1781	6	NNC	ENSG00000067560.14	novel	1805	5	NA	NA	0	46262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1154.12865833927	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGGAAGTTTATGATTT	-49349785	True	NA	NA	False	AAAAAG	-21	NA	49411928	49312876	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49312901_49359144_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
WTC11_00066087	chr3	-	1951	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	1190.21951756808	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49411591	False	NA	-10	True	AATAAA	-15	NA	49411625	49359144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
WTC11_00066088	chr3	-	1938	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1118.3048958133	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49349827	True	NA	-10	True	AATAAA	-15	NA	49411970	49359144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
WTC11_00066089	chr3	-	1578	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	4	0	1	multi-exon	FALSE	canonical	3	717	junction_1	763.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTATCCTGTTGTTTG	-49349857	True	NA	-9	True	AATAAA	-16	NA	49412000	49359143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49375433_49375592_49411819
WTC11_00066090	chr3	-	2047	7	FSM	ENSG00000145020.16	ENST00000636587.1	2040	7	0	-7	0	0	multi-exon	FALSE	canonical	2	12	junction_3	200.862860899891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	-49420856	False	NA	-19	True	ATTAAA	-6	NA	49422593	49416790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419709_49419789_49420210_49420343_49421491_49421573_49422103
WTC11_00066091	chr3	-	804	4	FSM	ENSG00000145020.16	ENST00000636188.1	804	4	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	239.785088962781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49415259	False	NA	-50	True	NA	NA	NA	49419026	49416821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417310_49417614_49417719_49417817_49417974_49418970
WTC11_00066096	chr3	-	648	3	FSM	ENSG00000173531.16	ENST00000480268.5	648	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGCCCACCCCATCCT	-49686148	False	NA	NA	False	NA	NA	NA	49686270	49685406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49685507_49685595_49685733_49685859
WTC11_00066097	chr3	-	1145	9	FSM	ENSG00000183763.9	ENST00000469027.5	1145	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	54.5727725152388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCCTCTTCCTTGACA	-49854289	True	NA	NA	False	NA	NA	NA	49856574	49829255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49847524_49847609_49848142_49848201_49856355
WTC11_00066098	chr3	-	4772	20	FSM	ENSG00000164078.14	ENST00000296474.8	4772	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	2.90762680356487	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGCAAACAGTGTGAAA	-49903696	True	NA	-25	True	AATAAA	-27	NA	49903873	49887001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49895960_49896108_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
WTC11_00066099	chr3	-	1921	13	NNC	ENSG00000214706.12	novel	1943	12	NA	NA	0	76164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.461384877765	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGGGGCATCAAGGAAGA	-50286809	True	NA	NA	False	AAAAAG	-29	NA	50292389	50211567	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_50211596_50287741_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
WTC11_00066101	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.05480466765633	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-50303476	True	NA	-22	True	AATAAA	-15	NA	50303574	50299892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
WTC11_00066102	chr3	-	1842	5	FSM	ENSG00000068028.18	ENST00000616212.4	1842	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	49.2512690191837	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	-50339136	False	NA	-10	True	AATAAA	-16	NA	50340936	50329785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50340555
WTC11_00066103	chr3	-	1021	9	FSM	ENSG00000114388.14	ENST00000433999.5	1006	9	0	-15	0	0	multi-exon	FALSE	canonical	1	2	junction_7	76.088661277486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGCATGTTGATGAA	-50347971	False	2774	NA	False	NA	NA	NA	50350745	50348145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349912_50350023_50350574
WTC11_00066104	chr3	-	2658	6	FSM	ENSG00000088543.15	ENST00000357203.8	2657	6	0	-1	0	1	multi-exon	FALSE	canonical	2	11	junction_4	17.5544866059934	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGAGCCTGTGACGC	-50566593	True	NA	2	True	ATTAAA	-27	NA	50567747	50558023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50566005_50566095_50567462
WTC11_00066105	chr3	-	2620	6	NIC	ENSG00000088543.15	novel	2657	6	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	20.7615028357776	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGAGCCTGTGACGC	-50566615	True	NA	2	True	ATTAAA	-27	NA	50567769	50558023	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_50559738_50560916_50561065_50561721_50561748_50565525_50565862_50566005_50566095_50567462
WTC11_00066108	chr3	-	2253	15	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_13	61.1011206016347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	-51966530	False	975	-51	True	NA	NA	NA	51967505	51957494	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51962809_51962893_51967325
WTC11_00066110	chr3	-	2103	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	-267	-18	-219	-1	multi-exon	FALSE	canonical	2	9	junction_3	18.624953392932	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGCTCCTGCTTCTAAA	-51974288	False	NA	-1	True	AATAAA	-18	NA	51974298	51968511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
WTC11_00066111	chr3	-	1670	3	FSM	ENSG00000114779.20	ENST00000487005.1	1998	3	332	-4	-219	-1	multi-exon	FALSE	canonical	1	5	junction_2	22	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGCTCCTGCTTCTAAA	-51974288	False	NA	-1	True	AATAAA	-18	NA	51974298	51968511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51973964
WTC11_00066112	chr3	-	845	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	-126	0	-112	0	multi-exon	FALSE	canonical	3	8	junction_2	3296.45464855805	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844182	True	NA	-30	True	AATAAA	-13	NA	51996007	51993627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
WTC11_00066116	chr3	-	1996	8	FSM	ENSG00000247596.10	ENST00000678330.1	1997	8	1	0	1	0	multi-exon	FALSE	canonical	3	463	junction_1	9.26481163833769	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGGGCTGGGGCAGGG	-52234995	True	NA	-56	True	NA	NA	NA	52239164	52228694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
WTC11_00066118	chr3	-	4709	16	FSM	ENSG00000010319.7	ENST00000231721.7	4993	16	1	283	1	-283	multi-exon	FALSE	canonical	1	1	junction_4	1.37598449603669	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTATTGTACTAAATG	-52444766	False	336	-34	True	NA	NA	NA	52445102	52433317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52436074_52437526_52437667_52437970_52438200_52438919_52438962_52439679_52439772_52439866_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
WTC11_00066119	chr3	-	686	6	FSM	ENSG00000168268.11	ENST00000463947.5	670	6	0	-16	0	16	multi-exon	FALSE	canonical	3	224	junction_1	757.183623700354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCCTCGTCACTTGA	-52527593	False	NA	-5	True	AATAAA	-35	NA	52527684	52524368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524612_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616
WTC11_00066120	chr3	-	2065	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	-18	0	16	multi-exon	FALSE	canonical	3	5	junction_13	552.386623886315	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCCTCGTCACTTGA	-52534963	True	NA	-5	True	AATAAA	-35	NA	52535054	52524368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
WTC11_00066121	chr3	-	7639	29	NIC	ENSG00000163939.18	novel	4980	29	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	40.4000877701613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGGTTGTTCTGTT	-52680336	True	NA	-4	True	AATAAA	-30	NA	52685917	52545356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
WTC11_00066122	chr3	-	7765	30	NIC	ENSG00000163939.18	novel	5145	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_4	39.7588150846101	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTTCTGTTAAAGT	-52680301	True	NA	1	True	AATAAA	-35	NA	52685882	52545351	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
WTC11_00066123	chr3	-	1594	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_9	82.6599459633665	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-52702682	True	NA	-7	True	AATAAA	-20	NA	52705781	52694485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
WTC11_00066124	chr3	-	755	5	FSM	ENSG00000248592.7	ENST00000514466.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	72.9194761363519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	NA	False	NA	-4	True	AATAAA	-26	NA	52842947	52833120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52833431_52833616_52833750_52834939_52835004_52840499_52840611_52842810
WTC11_00066125	chr3	-	1972	8	FSM	ENSG00000163931.17	ENST00000461139.5	1972	8	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_5	442.769807056462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53232105	False	NA	-25	True	AATATA	-10	NA	53232299	53225656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356
WTC11_00066127	chr3	-	3026	1	FSM	ENSG00000271976.1	ENST00000607783.1	2583	1	-441	-2	-441	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGTTCTCTGGGACAG	NA	False	NA	1	True	AATAAA	-18	NA	53862017	53858991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53859000_53862000
WTC11_00066128	chr3	-	2886	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17147	9577	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3100.73391312444	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTTTGGGAGGCCAA	NA	False	NA	NA	False	NA	NA	NA	54657004	54622544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54622598_54632123_54632503_54633558_54633741_54634460_54634566_54637690_54639820_54656966
WTC11_00066129	chr3	-	7333	3	NIC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	intron_retention	FALSE	canonical	3	6583	junction_2	553.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	-54576379	True	NA	-11	True	ATTAAA	-19	NA	54639857	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_54633741_54634460_54634566_54637690
WTC11_00066130	chr3	-	6095	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_1	3253	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	-54576379	True	NA	-11	True	ATTAAA	-19	NA	54639857	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54634460_54634566_54637690
WTC11_00066131	chr3	-	1373	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	353	junction_3	3047.75231728236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54637673_54637821_54639604
WTC11_00066132	chr3	-	1226	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3256.49467304271	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
WTC11_00066133	chr3	-	4622	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	3	486	junction_4	2754.17546645089	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	-54576379	True	NA	-11	True	ATTAAA	-19	NA	54639857	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637950_54639604
WTC11_00066134	chr3	-	1197	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	353	junction_3	3181.97835473468	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637673_54637950_54639604
WTC11_00066135	chr3	-	1356	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17147	0	at_least_one_novel_splicesite	FALSE	canonical	2	507	junction_4	3097.15363519474	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54657004	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690_54637821_54639604_54639820_54656966
WTC11_00066136	chr3	-	5537	23	NIC	ENSG00000163946.14	novel	5239	23	NA	NA	0	-4	combination_of_known_junctions	TRUE	canonical	2	3	junction_7	20.106380303914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATATATTGTACTTGAA	-56682595	True	NA	-18	True	AATAAA	-11	NA	56683265	56622865	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633844_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
WTC11_00066138	chr3	-	2334	5	NIC	ENSG00000163666.10	novel	1308	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	19	junction_4	42.9330874734161	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTGTTTTCATTAG	-57227387	True	NA	NA	False	AGTAAA	-19	NA	57227602	57197837	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_57198296_57198390_57198493_57198752_57198953_57199761_57200029_57226295
WTC11_00066139	chr3	-	1177	6	NIC	ENSG00000163666.10	novel	1308	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	52.227961859525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTGTTTTCATTAG	-57227428	True	NA	NA	False	AGTAAA	-19	NA	57227643	57197837	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_57198296_57198390_57198493_57198752_57198953_57199761_57200029_57226295_57226337_57227534
WTC11_00066144	chr3	-	711	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	34013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGAGCCCAGTTCA	-61741834	False	NA	NA	False	AAAAAG	-2	NA	61743106	61708441	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61708473_61742426
WTC11_00066145	chr3	-	737	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	3484	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAGCAAGACCCCATC	-61741834	False	NA	NA	False	AAAAAG	-1	NA	61743106	61738970	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61739005_61742403
WTC11_00066147	chr3	-	379	1	FSM	ENSG00000237456.3	ENST00000462623.1	405	1	66	-40	66	40	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAATTCACAGAACCT	NA	False	NA	NA	False	NA	NA	NA	62124542	62124163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62124200_62124500
WTC11_00066148	chr3	-	1109	2	FSM	ENSG00000241472.7	ENST00000662235.1	1109	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTATTAGAACCCATG	NA	False	NA	-21	True	AATAAA	-13	NA	62263505	62260872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62261096_62262619
WTC11_00066150	chr3	-	977	8	ISM	ENSG00000163618.18	ENST00000283269.13	4591	28	304320	117097	14325	45	internal_fragment	FALSE	canonical	3	11	junction_3	3.22616851161035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGAAGGTAAGGCTCC	NA	False	NA	NA	False	NA	NA	NA	62570921	62516068	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_62516183_62516579_62516644_62518148_62518251_62532870_62533059_62536444_62536582_62549902_62550116_62557404_62557514_62570871
WTC11_00066151	chr3	-	2734	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95536	2296	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	6.84754619472471	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTTTTATTTCTCTT	-63645076	True	NA	NA	False	AATAAA	-21	NA	63645587	63421299	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_63423766_63426685_63426807_63549977_63550052_63645514
WTC11_00066154	chr3	-	7263	22	NIC	ENSG00000151276.24	novel	7415	25	NA	NA	-376	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	36.7312973990408	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTCTGGATTGATAT	NA	False	NA	-2	True	AATACA	-27	NA	65598262	65353524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
WTC11_00066155	chr3	-	7491	21	NIC	ENSG00000151276.24	novel	6225	22	NA	NA	-281	359	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	41.9884210229439	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCATCACTTCTGGT	-65597818	False	NA	NA	False	AATAAA	-19	NA	65598167	65353165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375946_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65453257_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65597814
WTC11_00066156	chr3	-	7517	21	NIC	ENSG00000151276.24	novel	6225	22	NA	NA	-310	359	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	38.7632557972108	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCATCACTTCTGGT	-65597847	True	NA	NA	False	AATAAA	-19	NA	65598196	65353165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375946_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
WTC11_00066157	chr3	-	6932	22	NIC	ENSG00000151276.24	novel	7415	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_21	31.0113723562744	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTCTGGATTGATAT	-65622077	True	NA	-2	True	AATACA	-27	NA	65622088	65353524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971
WTC11_00066159	chr3	-	1485	5	ISM	ENSG00000151276.24	ENST00000497477.6	3555	21	-526	109206	0	0	5prime_fragment	FALSE	canonical	3	48	junction_3	26.9675731203236	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTATACCATTATTTC	-66034371	True	NA	NA	False	NA	NA	NA	66038834	65470282	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_65470485_65478591_65478799_65493511_65493632_65621971_65622089_66037995
WTC11_00066162	chr3	-	1331	11	FSM	ENSG00000172340.15	ENST00000493112.5	1516	11	-40	225	-38	-225	multi-exon	TRUE	canonical	2	12	junction_1	171.377828204234	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGTCGCCCACCAAAAT	-67647661	True	NA	NA	False	CATAAA	-45	NA	67654650	67360684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_67360769_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
WTC11_00066164	chr3	-	5317	24	NIC	ENSG00000114541.15	novel	6283	23	NA	NA	-42	772	combination_of_known_junctions	FALSE	canonical	2	7	junction_22	5.05471013194213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTGTGTCTTACAA	-69541772	True	NA	NA	False	ATTAAA	-1	NA	69542625	69170034	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_69171982_69176523_69176657_69180898_69181711_69182597_69182718_69187769_69187918_69189895_69189953_69193647_69193874_69195021_69195142_69195230_69195365_69196254_69196397_69196899_69197039_69198697_69198775_69216262_69216350_69218321_69218380_69221857_69221924_69224606_69224691_69249225_69249249_69250042_69250100_69287751_69287837_69302342_69302436_69311262_69311358_69313451_69313518_69432633_69432762_69542205
WTC11_00066167	chr3	-	798	3	FSM	ENSG00000114861.24	ENST00000648113.1	785	3	2	-15	2	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	NA	False	NA	NA	False	AAAAAG	-15	NA	70971165	70959190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_70959392_70965889_70966057_70970735
WTC11_00066169	chr3	-	2048	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	9	0	-9	multi-exon	FALSE	canonical	1	2	junction_1	1.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAAAATGTGATGTTGC	-72100852	True	NA	NA	False	ATTAAA	-16	NA	72100957	72097240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72099012_72099903_72100011_72100787
WTC11_00066170	chr3	-	3884	3	FSM	ENSG00000144736.14	ENST00000468371.5	4024	3	153	-13	153	13	multi-exon	FALSE	canonical	1	2	junction_2	85.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGCTTTCCTTTCTTTA	NA	False	NA	7	True	AATAAA	-38	NA	72795437	72749263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72750837_72792915_72793037_72793247
WTC11_00066171	chr3	-	2859	11	FSM	ENSG00000144736.14	ENST00000444040.6	2844	11	0	-15	0	13	multi-exon	FALSE	canonical	0	0	junction_10	53.9762910915524	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGCTTTCCTTTCTTTA	-72845511	True	NA	7	True	AATAAA	-38	NA	72848415	72749263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844454_72848197
WTC11_00066173	chr3	-	1601	7	FSM	ENSG00000227124.11	ENST00000648506.1	1577	7	0	-24	0	24	multi-exon	TRUE	canonical	2	2	junction_1	21.505167337694	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGTGTATGTGTATAT	-75782391	False	NA	NA	False	NA	NA	NA	75785336	75678635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75679152_75711186_75711317_75716418_75716542_75741275_75741369_75741609_75741737_75783305_75783365_75784783
WTC11_00066174	chr3	-	2172	1	NIC	ENSG00000227124.11	novel	1169	6	NA	NA	52926	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	NA	False	NA	-5	True	AATAAA	-30	NA	75732132	75729960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_75730000_75732100
WTC11_00066175	chr3	-	3232	5	NIC	ENSG00000227124.11	novel	1169	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_4	19.0394327646598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782630	True	NA	-5	True	AATAAA	-30	NA	75785575	75729960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75784783
WTC11_00066176	chr3	-	3923	5	FSM	ENSG00000227124.11	ENST00000652011.2	3923	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6852484422014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCCTCTATTTTGATG	-75782604	True	NA	-1	True	AATAAA	-17	NA	75785549	75735867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75739346_75741275_75741369_75741609_75741737_75783305_75783365_75785383
WTC11_00066177	chr3	-	2831	10	FSM	ENSG00000169855.21	ENST00000484514.1	3236	10	190	215	190	-215	multi-exon	FALSE	canonical	0	0	junction_8	74.7590367798229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACGAGTTCGAGACCA	-78715045	False	NA	NA	False	NA	NA	NA	78715067	78660153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396
WTC11_00066180	chr3	-	2069	1	FSM	ENSG00000178660.6	ENST00000313754.4	855	1	-4	-1210	-4	1210	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCACTTAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-11	NA	94507624	94505555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94505600_94507600
WTC11_00066181	chr3	-	5309	10	FSM	ENSG00000170854.18	ENST00000333396.11	5347	10	10	28	10	-28	multi-exon	FALSE	canonical	2	5	junction_9	32.1800490297258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATACAATAAAACACAGTT	-97971048	True	NA	-31	True	AAAAAG	-16	NA	97972447	97941845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
WTC11_00066182	chr3	-	970	3	FSM	ENSG00000289509.1	ENST00000692007.1	990	3	17	3	-17	0	multi-exon	FALSE	canonical	2	12	junction_1	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTGTCTTATAACTAT	-98324417	True	NA	NA	False	AATAAA	-16	NA	98325202	98262716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98263143_98277041_98277476_98325092
WTC11_00066183	chr3	-	2951	2	NNC	ENSG00000289509.1	novel	580	3	NA	NA	-15	-56585	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTATTTTCTGTTTGTTT	-98324415	True	NA	-5	True	AATAAA	-15	NA	98325200	98319301	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_98322145_98325092
WTC11_00066184	chr3	-	825	2	FSM	ENSG00000154174.8	ENST00000483945.1	905	2	80	0	80	0	multi-exon	FALSE	canonical	3	337	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTCTTTCTTAAAGC	-100373619	False	NA	NA	False	AATAAA	-16	NA	100373645	100372005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_100372723_100373537
WTC11_00066185	chr3	-	4721	23	FSM	ENSG00000138468.16	ENST00000314261.11	4736	23	15	0	-3	0	multi-exon	FALSE	canonical	1	5	junction_19	18.3915741577495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	101513226	101324272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101458954_101459053_101493872_101493969_101501069_101501120_101513090
WTC11_00066186	chr3	-	525	2	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	0	15154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101576947	101561334	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101561362_101576449
WTC11_00066187	chr3	-	567	2	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	-40	15154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101576987	101561334	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101561362_101576447
WTC11_00066188	chr3	-	3732	19	NIC	ENSG00000114423.23	novel	3669	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_18	14.9163304327923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGAGGAGCTTCCCTTTT	-105866126	True	NA	-4	True	AATAAA	-29	NA	105868979	105658268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
WTC11_00066189	chr3	-	3713	19	NIC	ENSG00000114423.23	novel	3706	21	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_18	18.6541790240613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGAGGAGCTTCCCTT	-105869362	False	NA	-6	True	AATAAA	-27	NA	105869387	105658270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105869336
WTC11_00066191	chr3	-	1214	8	NIC	ENSG00000196776.17	novel	5292	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	52.8849347785417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTGCCCAATTGAGA	-108088336	True	NA	-23	True	AATAAA	-15	NA	108091031	108047078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_108047293_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
WTC11_00066192	chr3	-	1338	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	24.3307290273021	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTAAAGATCCATC	-109316494	False	NA	4	True	AATAAA	-30	NA	109316517	109293779	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
WTC11_00066194	chr3	-	603	2	FSM	ENSG00000289069.1	ENST00000690584.1	625	2	11	11	11	-11	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACCTTGTATATTGCT	-110969594	False	NA	-10	True	ATTAAA	-14	NA	110969825	110966991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_110967271_110969501
WTC11_00066195	chr3	-	792	3	FSM	ENSG00000242242.7	ENST00000491709.5	792	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGGTAGACTGTATT	-111071530	True	NA	-68	True	NA	NA	NA	111071553	111045387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_111045910_111069263_111069472_111071491
WTC11_00066196	chr3	-	1022	1	FSM	ENSG00000244144.1	ENST00000487626.1	519	1	-1	-502	-1	502	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCCCCCTTTCTAATG	NA	False	NA	NA	False	NA	NA	NA	112185999	112184977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112185000_112186000
WTC11_00066197	chr3	-	4648	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	24	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_4	41.3753147017236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016167	True	NA	-4	True	ATTAAA	-18	NA	113019709	113002443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
WTC11_00066201	chr3	-	3466	18	NNC	ENSG00000163611.11	novel	5417	18	NA	NA	22	628	intron_retention	FALSE	canonical	2	8	junction_14	27.5685995592975	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACATTGATTTAATGG	-113513798	True	NA	5	True	AATAAA	-30	NA	113515134	113444625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494122_113499438_113499583_113503179_113503228_113506506_113506606_113514896
WTC11_00066203	chr3	-	13692	7	FSM	ENSG00000176542.10	ENST00000316407.9	13704	7	12	0	12	0	multi-exon	FALSE	canonical	2	8	junction_2	3.28718048721934	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCTGATCATT	-113694505	True	NA	0	True	AATAAA	-23	NA	113696630	113648384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113661426_113664312_113664410_113670120_113670204_113673347_113673377_113674831_113674897_113677281_113677398_113696369
WTC11_00066204	chr3	-	872	1	ISM	ENSG00000176542.10	ENST00000316407.9	13704	7	43034	4352	16625	502	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCACCCACCTCGGCCT	-113653594	False	NA	NA	False	NA	NA	NA	113653608	113652736	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_113652700_113653600
WTC11_00066205	chr3	-	3602	6	NNC	ENSG00000121579.14	novel	6112	5	NA	NA	0	44332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	675.149938902463	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACCATAACTTACTAA	-113716388	True	NA	NA	False	AAAAAG	-22	NA	113746249	113672125	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_113672154_113718992_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
WTC11_00066206	chr3	-	681	3	FSM	ENSG00000163617.11	ENST00000527855.1	837	3	74	82	74	-82	multi-exon	FALSE	canonical	2	5	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAAGTGATTTAGAAAC	NA	False	NA	NA	False	NA	NA	NA	114001697	113978576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113979011_113980649_113980794_114001594
WTC11_00066207	chr3	-	17448	1	FSM	ENSG00000259976.3	ENST00000570269.2	15214	1	-2299	65	-2299	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTTCACACTGTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	114332013	114314565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_114314600_114332000
WTC11_00066208	chr3	-	9404	7	FSM	ENSG00000185565.12	ENST00000490035.7	9416	7	0	12	0	-12	multi-exon	FALSE	canonical	1	5	junction_6	4.68152396839605	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCTTCATTGACCTG	-116444887	True	NA	-22	True	AATAAA	-12	NA	116445487	115802385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_115810415_115841844_115841994_115842457_115842579_115852482_115852618_116019514_116019641_116086323_116086557_116444876
WTC11_00066209	chr3	-	3522	7	FSM	ENSG00000144847.13	ENST00000393775.7	3523	7	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	2.80871659105879	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCATCCTGTTAAAT	-119034697	True	NA	NA	False	TTTAAA	-29	NA	119034845	118900556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_118902962_118904647_118904799_118905595_118905719_118926100_118926257_118928508_118928717_118930111_118930276_119034530
WTC11_00066210	chr3	-	2381	10	NNC	ENSG00000121578.13	novel	2385	9	NA	NA	0	36719	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	61.8510756216539	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAATAAAAGAAAAAAAAA	-119237943	True	NA	NA	False	NA	NA	NA	119240907	119175012	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119175048_119211741_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
WTC11_00066212	chr3	-	2299	9	NNC	ENSG00000121578.13	novel	2385	9	NA	NA	0	31926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.9190534083264	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCTCACG	-119237943	True	NA	NA	False	NA	NA	NA	119240907	119179805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119179842_119211741_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
WTC11_00066214	chr3	-	467	4	NNC	ENSG00000138495.7	novel	426	3	NA	NA	0	30803	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1450.97645282984	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAACTCATTAAATACA	-119662296	True	NA	NA	False	AAAAAG	-8	NA	119677406	119623709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119623743_119669523_119669666_119675144_119675234_119677203
WTC11_00066215	chr3	-	430	4	FSM	ENSG00000138495.7	ENST00000486606.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1546.63010014246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662184	False	NA	-17	True	AGTAAA	-16	NA	119677294	119669531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119669666_119674672_119674789_119675144_119675234_119677203
WTC11_00066216	chr3	-	8963	10	FSM	ENSG00000082701.17	ENST00000650344.2	1731	10	-1873	-5359	-770	2	multi-exon	FALSE	canonical	3	7	junction_1	38.8272527428294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGTCCTCTTATTTA	-120095669	True	NA	NA	False	AATAAA	-20	NA	120095764	119821318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119826856_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
WTC11_00066217	chr3	-	3689	12	NNC	ENSG00000163430.12	novel	5682	11	NA	NA	0	44916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	321.470330751874	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGGCCTGGGAAAAAAGA	-120434904	True	NA	NA	False	AAAAAG	-3	NA	120450960	120347376	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_120347403_120394279_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
WTC11_00066218	chr3	-	1101	11	NNC	ENSG00000163430.12	novel	565	6	NA	NA	0	-215	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	296.017972427351	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGCATAAGCTTGTAA	-120434935	True	NA	NA	False	AGTAAA	-8	NA	120450991	120397105	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_120397230_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
WTC11_00066219	chr3	-	563	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	-23	0	23	multi-exon	FALSE	canonical	2	5	junction_1	511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAAGCACACTGTTCT	-120434936	True	NA	NA	False	ATTAAA	-38	NA	120450992	120421148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120421553_120450683_120450747_120450896
WTC11_00066220	chr3	-	6910	15	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	54799	-5	-9593	5	3prime_fragment	FALSE	canonical	3	69	junction_9	11.9652984645991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACAATTGTTTTGTTA	-121491173	False	NA	-7	True	AATAAA	-22	NA	121491189	121431425	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301
WTC11_00066223	chr3	-	12640	22	NNC	ENSG00000173230.16	novel	11187	22	NA	NA	-1428	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_20	54.7527528584475	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTATGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	121751183	121663198	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719751_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
WTC11_00066226	chr3	-	3123	11	FSM	ENSG00000138496.17	ENST00000477522.6	3128	11	0	5	0	-5	multi-exon	TRUE	canonical	2	3	junction_10	5.15848815061157	2991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACTGGCTCTGAAAAAT	-122564551	False	NA	NA	False	AATAAA	-14	NA	122564577	122527928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564438
WTC11_00066227	chr3	-	2986	6	FSM	ENSG00000169087.11	ENST00000465044.5	2986	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	25.3582333769527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGGAATAAAAGG	-122792520	True	NA	NA	False	AATAGA	-40	NA	122793714	122752860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122755072_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
WTC11_00066230	chr3	-	3666	10	NNC	ENSG00000173175.15	novel	6643	21	NA	NA	3574	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	41.1720269414701	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123313075	True	NA	0	True	ATTAAA	-16	NA	123314578	123282295	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
WTC11_00066231	chr3	-	4153	11	NNC	ENSG00000173175.15	novel	6643	21	NA	NA	3204	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	30.763614872118	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123314719	False	NA	0	True	ATTAAA	-16	NA	123314948	123282295	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
WTC11_00066232	chr3	-	4184	12	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	96327	-2282	-1863	0	3prime_fragment	FALSE	canonical	3	26	junction_10	36.6195540051649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123319786	True	NA	0	True	ATTAAA	-16	NA	123320015	123282295	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673
WTC11_00066233	chr3	-	6643	21	FSM	ENSG00000173175.15	ENST00000462833.6	6643	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	53.3745960172065	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123449018	False	12	0	True	ATTAAA	-16	NA	123449090	123282295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673_123319819_123320748_123320772_123325321_123325463_123327617_123327760_123328643_123328803_123330888_123331017_123332563_123332676_123347781_123347904_123352431_123352582_123447411
WTC11_00066234	chr3	-	220	2	ISM	ENSG00000065534.20	ENST00000688223.1	5069	16	52140	28065	8493	4671	internal_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGGACCTCAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	123649064	123640378	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_123640505_123648970
WTC11_00066235	chr3	-	4005	10	NIC	ENSG00000175455.16	novel	4131	13	NA	NA	9	0	intron_retention	FALSE	canonical	2	2	junction_8	69.9996472654252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	-123956701	True	NA	NA	False	AATAAA	-23	NA	123961369	123913421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956739_123956796_123961143
WTC11_00066236	chr3	-	3939	11	NIC	ENSG00000175455.16	novel	4131	13	NA	NA	-2	-16	intron_retention	FALSE	canonical	3	9	junction_9	67.8089227167045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAACAAATAAGTTCAGAA	-123956559	True	NA	NA	False	NA	NA	NA	123961227	123913468	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956739_123956796_123961143
WTC11_00066238	chr3	-	1600	2	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCATCCGGGAGGGAG	-124752097	False	NA	NA	False	NA	NA	NA	124752126	124750243	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_124750533_124750815
WTC11_00066240	chr3	-	1300	8	NNC	ENSG00000163848.20	novel	566	5	NA	NA	0	-40168	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.1939391649975	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTATATATGTATA	-125374195	True	NA	NA	False	AATAAA	-21	NA	125375249	125272679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125272932_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
WTC11_00066241	chr3	-	2502	14	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	71.3523634038397	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATGATTTTTGTTAATT	-125515206	True	NA	-4	True	AATAAA	-24	NA	125520193	125446646	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489460_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
WTC11_00066243	chr3	-	2263	11	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	-18	0	intron_retention	FALSE	canonical	2	2	junction_10	18.8257801963159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126083947	False	NA	-1	True	AATAAA	-21	NA	126084041	126006356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126083928
WTC11_00066244	chr3	-	2062	10	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	9	junction_8	19.7765292989218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126083128	True	NA	-1	True	AATAAA	-21	NA	126084112	126006356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
WTC11_00066245	chr3	-	3064	23	FSM	ENSG00000144908.14	ENST00000393434.7	3064	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.30208313856375	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCACATCTCTGCGTTT	-126180555	True	NA	NA	False	AATAAA	-16	NA	126180586	126103569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
WTC11_00066247	chr3	-	1928	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	65.8963624072862	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127597903	True	NA	-12	True	AATAAA	-18	NA	127598257	127573068	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
WTC11_00066248	chr3	-	4059	1	FSM	ENSG00000175792.12	ENST00000582176.1	4062	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATGTACAGAGTCATT	NA	False	NA	-10	True	AATAAA	-15	NA	128085019	128080960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128081000_128085000
WTC11_00066249	chr3	-	401	1	FSM	ENSG00000242992.3	ENST00000480365.1	553	1	15	137	15	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGCAGGTGAAAGCC	NA	False	NA	NA	False	NA	NA	NA	128765003	128764602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128764600_128765000
WTC11_00066250	chr3	-	3161	5	FSM	ENSG00000114656.13	ENST00000669741.1	3200	5	0	39	0	-39	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAGCAAAGGCTAACAG	NA	False	NA	NA	False	ATTAAA	-27	NA	128945138	128913128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128915564_128916106_128916272_128932699_128932998_128935124_128935320_128945070
WTC11_00066251	chr3	-	2581	12	NNC	ENSG00000240682.10	novel	1704	12	NA	NA	-276	41894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.376434212506	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTCCCAGACACTCCTA	-129161329	False	NA	NA	False	NA	NA	NA	129161339	129085520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129085551_129128751_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
WTC11_00066253	chr3	-	1627	4	FSM	ENSG00000172780.17	ENST00000476465.5	1627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.9394419523265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTGTGTAGCTTCT	-129121707	False	NA	NA	False	NA	NA	NA	129121781	129090493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129091347_129092499_129092594_129094985_129095170_129121285
WTC11_00066254	chr3	-	565	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	-242	12	-242	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTTTCACCTGTGTG	-129164169	False	NA	-33	True	AATAAA	-4	NA	129164182	129163617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129163600_129164200
WTC11_00066255	chr3	-	243	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	721	66	721	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGTGGAGCCCTGAAG	-129277996	False	NA	NA	False	NA	NA	NA	129278061	129277818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129277800_129278100
WTC11_00066256	chr3	-	236	2	Genic_Genomic	ENSG00000184897.6	novel	1516	1	NA	NA	1311	6362	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGATGGCAGATTTTAT	-129314590	False	NA	NA	False	AAAAAG	-1	NA	129314975	129308408	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_129308440_129314770
WTC11_00066257	chr3	-	2093	4	NIC	ENSG00000251474.7	novel	2161	5	NA	NA	2	105	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	8.64098759787715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTGAGCACCAACCT	-129398076	True	NA	3	True	AATAAA	-34	NA	129399436	129382816	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129384219_129393634_129393796_129397039_129397141_129399007
WTC11_00066258	chr3	-	7622	4	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-37	3992	-3	-1512	5prime_fragment	FALSE	canonical	2	11	junction_1	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTACGCCTTTTAAC	-129398082	True	NA	NA	False	AATAAA	-16	NA	129399442	129386913	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_129393796_129396216_129396421_129397039_129397141_129399007
WTC11_00066260	chr3	-	5499	6	FSM	ENSG00000172765.18	ENST00000426664.6	5484	6	0	-15	0	13	multi-exon	FALSE	canonical	0	0	junction_4	17.3020230031057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTTTGTTTTGCTTTT	-129893563	False	NA	1	True	AATAAA	-29	NA	129893576	129647778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828078_129832773_129832827_129893493
WTC11_00066261	chr3	-	1293	1	FSM	ENSG00000203644.3	ENST00000366451.3	910	1	-388	5	-388	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGACAGCATTCTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	129848345	129847052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129847100_129848300
WTC11_00066262	chr3	-	580	4	FSM	ENSG00000248243.1	ENST00000514010.1	713	4	133	0	133	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCCACATCTCAAGT	-130094155	False	NA	NA	False	NA	NA	NA	130094171	130089432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_130089479_130090701_130091121_130091776_130091868_130094147
WTC11_00066264	chr3	-	2673	6	NNC	ENSG00000034533.12	novel	2687	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	24	junction_5	14.8942942095287	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTGTATTTCTAAATA	-131026526	True	NA	-6	True	AATAAA	-18	NA	131026808	131013875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_131014388_131016143_131016340_131018505_131018717_131024004_131025332_131025473_131025595_131026502
WTC11_00066268	chr3	-	244	1	FSM	ENSG00000249020.1	ENST00000505219.1	137	1	7	-114	7	114	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCTCACACCTGTAATC	-131479207	False	NA	NA	False	ATTAAA	-25	NA	131479226	131478982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131479000_131479200
WTC11_00066269	chr3	-	3749	16	FSM	ENSG00000196353.13	ENST00000429747.6	3749	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	2.37954243967663	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAAGAGTTGTGGTC	-132034680	True	NA	NA	False	AATAAA	-17	NA	132035014	131533568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445_131723626_131905263_131905445_132034566
WTC11_00066270	chr3	-	4492	11	FSM	ENSG00000113971.21	ENST00000474871.5	4493	11	0	1	0	-1	multi-exon	FALSE	canonical	3	17	junction_7	5.53985559378582	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCCCCACTCTAGTT	NA	False	NA	-23	True	AATAAA	-17	NA	132694870	132680609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132682091_132682702_132682819_132683398_132683525_132684553_132686388_132687150_132687227_132688649_132688892_132689073_132689264_132690527_132690651_132691191_132691287_132692653_132692819_132694826
WTC11_00066273	chr3	-	525	3	FSM	ENSG00000163781.14	ENST00000503464.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTTGTGATGTTCCTT	-133608668	False	NA	NA	False	AATAAA	-16	NA	133608696	133598174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133598463_133598555_133598631_133608534
WTC11_00066274	chr3	-	4247	14	FSM	ENSG00000174640.15	ENST00000310926.11	4067	14	-180	0	-180	0	multi-exon	FALSE	canonical	1	2	junction_1	3.77158482219423	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACTTGGTCATGAATTT	NA	False	NA	-3	True	ATTAAA	-22	NA	134030105	133932700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133954965_133955194_133973662_133973826_133979480_133979619_134029706
WTC11_00066275	chr3	-	4976	5	FSM	ENSG00000163785.13	ENST00000473208.5	5270	5	295	-1	295	0	multi-exon	FALSE	canonical	3	359	junction_4	33.327916226491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTATTGAAATTATTT	-134181365	False	NA	-11	True	ATTAAA	-18	NA	134181377	134157132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940
WTC11_00066281	chr3	-	278	1	FSM	ENSG00000240695.1	ENST00000468074.1	730	1	421	31	421	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGACCACCGAAAGTAAAA	NA	False	NA	NA	False	GATAAA	-12	NA	136736808	136736530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136736500_136736800
WTC11_00066282	chr3	-	3505	17	NIC	ENSG00000158163.15	novel	3492	16	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	6.19349457091875	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTATTTCATTATTTT	-138114898	True	NA	-1	True	AATATA	-43	NA	138115612	138061985	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138112363_138112501_138115459
WTC11_00066283	chr3	-	677	4	FSM	ENSG00000158163.15	ENST00000490472.1	708	4	0	31	0	-31	multi-exon	FALSE	canonical	3	10	junction_1	7.40870359029762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCCAACATAAAAGGCTT	NA	False	NA	NA	False	TTTAAA	-34	NA	138103778	138092382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138092545_138094861_138094984_138097762_138097848_138103470
WTC11_00066287	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	38.1587327998309	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138589501	True	NA	1	True	ATTAAA	-16	NA	138594248	138499883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
WTC11_00066289	chr3	-	3221	22	FSM	ENSG00000184432.11	ENST00000507777.6	3221	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	196.555243427442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378142	True	NA	22	True	NA	NA	NA	139389676	139357405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389630
WTC11_00066291	chr3	-	1788	14	NIC	ENSG00000114126.18	novel	1853	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_11	162.652604720875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	-142148064	True	NA	-12	True	AATAAA	-32	NA	142149470	141952480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142054114_142054150_142093060_142093128_142101734_142101842_142149182
WTC11_00066293	chr3	-	513	1	FSM	ENSG00000233597.3	ENST00000498753.1	576	1	102	-39	102	39	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGATCAGCCATTAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	142044096	142043583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142043600_142044100
WTC11_00066297	chr3	-	2821	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	-746	0	746	multi-exon	FALSE	canonical	3	20	junction_5	5.57740423642835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCTACTAGAGTCTTA	-142444861	True	NA	NA	False	AATAAA	-33	NA	142448010	142417094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
WTC11_00066298	chr3	-	7076	44	FSM	ENSG00000175054.16	ENST00000656590.1	7056	44	0	-20	0	15	multi-exon	FALSE	canonical	1	8	junction_2	19.9959703890802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGAATATCATGTGTT	NA	False	NA	96	True	AATAAA	-37	NA	142561381	142449214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142449603_142450465_142450603_142453127_142453234_142457603_142457756_142458957_142459112_142459226_142459384_142461939_142462091_142465096_142465241_142466323_142466534_142467933_142468069_142469336_142469570_142470085_142470184_142485139_142485283_142493131_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242
WTC11_00066299	chr3	-	7645	35	FSM	ENSG00000175054.16	ENST00000653868.1	8096	35	0	451	0	-451	multi-exon	FALSE	canonical	3	33	junction_7	11.784542100818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTCACCTTCCCAGTT	-142576343	True	NA	NA	False	NA	NA	NA	142578733	142491593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
WTC11_00066301	chr3	-	281	2	FSM	ENSG00000163710.9	ENST00000483454.1	666	2	0	385	0	-385	multi-exon	FALSE	canonical	3	123	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTTTTTCCTCTGGT	-142888870	False	NA	NA	False	AAAAAG	-40	NA	142888927	142887610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142887778_142888813
WTC11_00066302	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-143001166	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_143000900_143001500
WTC11_00066303	chr3	-	705	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	24	-17	13	17	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTTACTTCTTAGCC	-143848347	True	NA	NA	False	AATAAA	-33	NA	143848445	143847576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_143847984_143848147
WTC11_00066305	chr3	-	748	3	FSM	ENSG00000174963.18	ENST00000463850.5	834	3	86	0	47	0	multi-exon	TRUE	canonical	2	4	junction_2	0.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAATATTTACGTCTAA	-147392286	True	NA	NA	False	NA	NA	NA	147392344	147388649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_147388860_147390930_147391247_147392122
WTC11_00066307	chr3	-	3612	1	FSM	ENSG00000241627.3	ENST00000461599.1	1801	1	-73	-1738	-73	1738	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTGTTTATCCATTC	NA	False	NA	NA	False	NA	NA	NA	148987741	148984129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_148984100_148987700
WTC11_00066308	chr3	-	4461	26	FSM	ENSG00000071794.16	ENST00000494055.5	3633	26	50	-878	0	10	multi-exon	FALSE	canonical	2	23	junction_1	104.227873431247	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGTGCCATAATTTTGAC	-149075572	True	NA	-13	True	AATAAA	-24	NA	149086504	149030116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149031361_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
WTC11_00066309	chr3	-	5321	25	NIC	ENSG00000071794.16	novel	5320	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_6	98.6106259768974	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075590	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041681_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
WTC11_00066310	chr3	-	410	2	FSM	ENSG00000047457.14	ENST00000474204.1	712	2	302	0	302	0	multi-exon	FALSE	canonical	3	8	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTCATACAGTCTAAT	NA	False	NA	NA	False	AATAAA	-1	NA	149176412	149173483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149173731_149176249
WTC11_00066311	chr3	-	589	4	FSM	ENSG00000047457.14	ENST00000463556.5	590	4	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCCTAGAAATGTTTC	NA	False	NA	NA	False	NA	NA	NA	149179737	149176362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149176413_149177839_149177980_149178414_149178632_149179555
WTC11_00066313	chr3	-	830	2	FSM	ENSG00000120742.11	ENST00000491660.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1882	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTAACTCCATTATC	-150512813	True	NA	NA	False	AATAAA	-42	NA	150546499	150545396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_150545779_150546051
WTC11_00066314	chr3	-	2338	3	NNC	ENSG00000181788.4	novel	2311	2	NA	NA	0	16608	intron_retention	FALSE	non_canonical	0	0	junction_1	97	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTATTTAGGAAAGTG	-150761691	True	NA	NA	False	NA	NA	NA	150763169	150724516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_150724544_150741124_150742699_150762432
WTC11_00066315	chr3	-	2599	3	NNC	ENSG00000181788.4	novel	427	3	NA	NA	0	16608	intron_retention	FALSE	non_canonical	0	0	junction_1	97	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTATTTAGGAAAGTG	-150763392	True	NA	NA	False	NA	NA	NA	150763431	150724516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_150724543_150741124_150742699_150762432
WTC11_00066317	chr3	-	263	1	FSM	ENSG00000174946.7	ENST00000617554.1	960	1	739	-42	739	42	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGTTAATTATAGCTT	NA	False	NA	NA	False	CATAAA	-42	NA	151198647	151198384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_151198400_151198600
WTC11_00066319	chr3	-	7721	21	ISM	ENSG00000174953.14	ENST00000496811.6	6723	25	13680	-727	1441	727	3prime_fragment	FALSE	canonical	3	330	junction_20	61.2090475338409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGTGTGGTTATAT	-154310774	False	NA	-2	True	AATAAA	-23	NA	154310807	154271818	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652
WTC11_00066323	chr3	-	2042	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	394.161372409829	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTTTCTTTCAAGACC	-155266161	True	NA	0	True	AATAAA	-21	NA	155280513	155202380	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155203787_155204791_155204904_155258618_155258683_155278366_155278560_155280246
WTC11_00066324	chr3	-	1333	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	378.507843379764	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATCTAACATTTTTCTT	-155266161	True	NA	-4	True	AATAAA	-24	NA	155280513	155226753	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155227446_155258618_155258683_155265037_155265155_155278366_155278560_155280246
WTC11_00066325	chr3	-	3916	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	341.922048864942	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACATACAAAATATTTGT	-155266176	True	NA	-13	True	AATACA	-14	NA	155280528	155247566	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265155_155278366_155278560_155280246
WTC11_00066326	chr3	-	3531	6	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	326.702555851649	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACATACAAAATATTTGT	-155266180	True	NA	-13	True	AATACA	-14	NA	155280532	155247566	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
WTC11_00066327	chr3	-	3133	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	99.6970410794623	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGAATACAGTATATG	-155266134	True	NA	16	True	NA	NA	NA	155280486	155247592	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155249624_155250149_155250827_155258618_155258683_155265037_155265159_155280246
WTC11_00066328	chr3	-	3232	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	358.844673918953	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGAATACAGTATATG	-155266161	True	NA	16	True	NA	NA	NA	155280513	155247592	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155249624_155250149_155250827_155258618_155258683_155278366_155278560_155280246
WTC11_00066329	chr3	-	3364	6	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	336.387514631563	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGAATACAGTATATG	-155266176	True	NA	16	True	NA	NA	NA	155280528	155247592	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155249624_155250149_155250827_155258618_155258683_155265037_155265155_155278366_155278560_155280246
WTC11_00066331	chr3	-	4032	4	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	398.423839090428	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155263837_155265037_155265155_155278366_155278560_155280246
WTC11_00066332	chr3	-	5483	4	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_2	410.151191635475	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155265155_155267397_155267648_155278366_155278560_155280246
WTC11_00066333	chr3	-	4279	5	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	391.644848683089	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGGTTATATCCTCT	-155266161	True	NA	-12	True	AATAAA	-21	NA	155280513	155260381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155263834_155265037_155265155_155267397_155267648_155278366_155278560_155280246
WTC11_00066334	chr3	-	1017	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTTGGTGGT	-155275478	False	NA	-7	True	AATAAA	-16	NA	155275495	155274478	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155274500_155275500
WTC11_00066336	chr3	-	1937	6	FSM	ENSG00000174928.16	ENST00000482061.6	1926	6	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_4	25.8843582110896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTCTCCTAATTGCT	-155805901	True	NA	1	True	AATAAA	-30	NA	155806266	155762605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155805596_155805724_155806138
WTC11_00066339	chr3	-	490	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	21	1	21	-1	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCTAGGCTCTACCAG	-156674248	True	NA	NA	False	AATAAA	-19	NA	156674425	156671859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156672131_156674206
WTC11_00066340	chr3	-	1045	1	FSM	ENSG00000174912.7	ENST00000481421.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCATCATCTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	156714928	156713883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156713900_156714900
WTC11_00066341	chr3	-	1694	1	FSM	ENSG00000230457.3	ENST00000473864.1	1182	1	-246	-266	-246	266	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGATCTGGAC	NA	False	NA	NA	False	AATAAA	-15	NA	156810978	156809284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156809300_156811000
WTC11_00066342	chr3	-	2139	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_8	55.3587846806838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	-157152733	True	NA	-7	True	AATAAA	-24	NA	157160134	157147795	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
WTC11_00066348	chr3	-	3677	18	NIC	ENSG00000068885.15	novel	3999	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	27.3097065016113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCTCATATCCTAGAAT	-160397990	True	NA	-3	True	AATAAA	-32	NA	160399209	160256986	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160399145
WTC11_00066352	chr3	-	3275	5	FSM	ENSG00000169255.15	ENST00000651686.1	3256	5	0	-19	0	-6	multi-exon	FALSE	canonical	3	26	junction_3	8.45576726264388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTAGAGTGTTCTAT	-161104819	True	NA	-6	True	AATAAA	-26	NA	161105338	161083888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161105234
WTC11_00066358	chr3	-	2402	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	3	0	-2	multi-exon	FALSE	canonical	2	25	junction_1	3.74165738677394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGGTCTCTTTGTTTTT	-165837213	True	NA	NA	False	ATTAAA	-15	NA	165837423	165772906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
WTC11_00066359	chr3	-	2513	5	FSM	ENSG00000114200.10	ENST00000497011.5	2522	5	7	2	7	-2	multi-exon	FALSE	canonical	1	1	junction_1	15.7856738848869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGGTCTCTTTGTTTTT	-165837245	True	NA	NA	False	ATTAAA	-15	NA	165837455	165772906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165773507_165777716_165777796_165786144_165786312_165829516_165831042_165837313
WTC11_00066360	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	-165837210	True	NA	4	True	AATAAA	-22	NA	165837420	165773078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165773507_165786144_165786312_165837313
WTC11_00066361	chr3	-	736	8	FSM	ENSG00000169064.13	ENST00000474464.5	746	8	10	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_6	2.26778683805536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGCACTAAAGCTCCACA	-167380115	True	NA	NA	False	NA	NA	NA	167380287	167350456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167350516_167359869_167359980_167360674_167360724_167365885_167365977_167368460_167368575_167372833_167372951_167379637_167379793_167380246
WTC11_00066364	chr3	-	4313	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	17	-20	17	20	multi-exon	FALSE	canonical	2	2	junction_4	3.32398689661811	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCTTATTAGTTTA	-168094113	True	NA	0	True	AATAAA	-35	NA	168095907	168008668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
WTC11_00066365	chr3	-	438	1	FSM	ENSG00000277925.1	ENST00000363312.1	438	1	-3	3	-3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTCGCTTTCCTGTTG	-169759765	True	NA	-7	True	NA	NA	NA	169765050	169764612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169764600_169765000
WTC11_00066366	chr3	-	3659	1	FSM	ENSG00000269984.1	ENST00000602342.1	3143	1	-54	-462	-54	462	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	169780388	169776729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169776700_169780400
WTC11_00066367	chr3	-	2383	11	FSM	ENSG00000171757.17	ENST00000446859.7	2383	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	12.1326007104825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGTCTGGCTTCTTT	-169812548	True	NA	NA	False	TATAAA	-23	NA	169812904	169793002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
WTC11_00066369	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	456.754736033343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-170870015	False	NA	-13	True	AATAAA	-19	NA	170870033	170866263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
WTC11_00066372	chr3	-	750	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	63.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-171457964	True	NA	-15	True	ATTAAA	-16	NA	171460405	171346933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171347219_171369619_171369686_171460006
WTC11_00066377	chr3	-	3375	2	ISM	ENSG00000288895.1	ENST00000693515.1	641	3	-755	0	-755	0	intron_retention	FALSE	canonical	3	494	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	176327823	176321654	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_176322019_176324812
WTC11_00066378	chr3	-	648	3	NNC	ENSG00000288895.1	novel	854	3	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	243.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-176327147	False	NA	-1	True	AATAAA	-22	NA	176327170	176321654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176322019_176324812_176325001_176327074
WTC11_00066379	chr3	-	626	4	NNC	ENSG00000237978.6	novel	844	8	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGATTACAAGCCATTG	-178859279	True	NA	-35	True	AATAAA	-16	NA	178860383	178748992	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_178749237_178841544_178841617_178859488_178859624_178860208
WTC11_00066380	chr3	-	9188	6	ISM	ENSG00000172667.11	ENST00000652290.1	2826	10	-233	57102	151	0	5prime_fragment	FALSE	canonical	3	23	junction_5	4.83321838943783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-179072051	False	NA	0	True	AATAAA	-26	NA	179072064	179017222	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
WTC11_00066383	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	439.865888652439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	-179598421	True	NA	-1	True	ATTAAA	-24	NA	179604649	179588830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
WTC11_00066399	chr3	-	1469	3	Genic_Genomic	ENSG00000229638.1	novel	1284	1	NA	NA	-57	56676	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGCTGTTGTAGAAGT	NA	False	NA	NA	False	NA	NA	NA	185418835	185360818	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_185360844_185407870_185407895_185417415
WTC11_00066403	chr3	-	1482	3	Genic_Genomic	ENSG00000229638.1	novel	1284	1	NA	NA	-57	43671	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCACTGTATAGGAC	NA	False	NA	NA	False	AATAAA	-41	NA	185418835	185373823	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_185373849_185407870_185407895_185417402
WTC11_00066408	chr3	-	2773	8	NIC	ENSG00000113838.13	novel	3058	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	64.79354969156	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-186570060	True	NA	NA	False	AATAAA	-15	NA	186570300	186546066	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558525_186563993_186564373_186570106
WTC11_00066411	chr3	-	433	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	6	-50623	at_least_one_novel_splicesite	FALSE	canonical	3	319	junction_1	218.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTGTACCAGATTT	-187180848	False	NA	-11	True	AATAAA	-21	NA	187180902	187171570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187171706_187173615_187173676_187180664
WTC11_00066422	chr3	-	4068	16	FSM	ENSG00000061938.21	ENST00000672887.2	4070	16	0	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	13.5344827098128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTACTTGTGCCTGCCTG	-195908529	False	NA	-6	True	AATAAA	-20	NA	195908551	195863365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195869496_195869542_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
WTC11_00066423	chr3	-	4323	14	FSM	ENSG00000061938.21	ENST00000672024.1	4325	14	0	2	0	-1	multi-exon	FALSE	canonical	1	1	junction_13	9.9293361296882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTACTTGTGCCTGCCTG	-195908925	False	NA	-6	True	AATAAA	-20	NA	195908947	195863365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195864188_195866888_195867017_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425_195888607_195908484
WTC11_00066434	chr3	-	1720	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	36.2859017617954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196568578	False	NA	-5	True	AATAAA	-25	NA	196568600	196554176	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_196554808_196560995_196561492_196566876_196567308_196568438
WTC11_00066435	chr3	-	980	3	FSM	ENSG00000185798.8	ENST00000425888.1	980	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTGGATATGCAGGT	-196567590	True	NA	NA	False	NA	NA	NA	196568522	196561013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196561492_196566889_196567308_196568438
WTC11_00066439	chr3	-	5218	25	NNC	ENSG00000075711.21	novel	4524	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	101.890429983499	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATATATTAAAATTTAC	-197295989	True	NA	-37	True	TATAAA	-9	NA	197298114	197042597	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197194424_197194590_197282678_197282846_197295313_197295409_197296345_197296478_197297185_197297236_197297672
WTC11_00066441	chr3	-	4804	26	NIC	ENSG00000075711.21	novel	4649	26	NA	NA	-19	10	combination_of_known_junctions	FALSE	canonical	3	69	junction_8	72.3800414479019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTATGAAGAAGAGGAGAA	-197297842	False	2125	-54	True	NA	NA	NA	197297890	197042974	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
WTC11_00066444	chr3	-	1094	9	FSM	ENSG00000214135.9	ENST00000689038.1	1118	9	15	9	2	-9	multi-exon	FALSE	canonical	3	11	junction_1	47.5598307398166	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCTTGTCTTTCTGTGC	-197623482	True	NA	-11	True	AATAAA	-11	NA	197627869	197611541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197611623_197613224_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
WTC11_00066445	chr3	-	6362	5	NIC	ENSG00000214135.9	novel	2435	7	NA	NA	0	-6	intron_retention	FALSE	canonical	3	36	junction_2	49.1782472237472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGACCAGTCTCAGATAT	-197623484	True	NA	NA	False	AATAAA	-14	NA	197627871	197614032	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
WTC11_00066449	chr3	+	1970	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCCCCCCACAACAGTC	NA	False	NA	NA	False	NA	NA	NA	10295594	10297564	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_10295600_10297600
WTC11_00066451	chr3	+	5008	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGGGACCATAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	18137100	18142108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_18137100_18142100
WTC11_00066452	chr3	+	1799	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGCAGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	20165074	20166873	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_20165100_20166900
WTC11_00066454	chr3	+	2194	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCGAAGTACACTGATTT	32898466	False	NA	37	True	GATAAA	-17	NA	32898493	32900687	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_32898500_32900700
WTC11_00066455	chr3	+	2008	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGGACTGTTTCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	40520288	40522296	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_40520300_40522300
WTC11_00066456	chr3	+	557	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTGGTAAGGGGTG	NA	False	NA	NA	False	NA	NA	NA	46246343	46246900	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46246300_46246900
WTC11_00066457	chr3	+	3627	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTCATTGTCTTTGTT	48280238	False	NA	3	True	ATTAAA	-10	NA	48280254	48283881	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_48280300_48283900
WTC11_00066458	chr3	+	390	1	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	765	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAATTTTTAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	49585254	49585644	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_49585300_49585600
WTC11_00066459	chr3	+	1928	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCCAAAAGGGAGGTAC	NA	False	NA	NA	False	NA	NA	NA	61638591	61640519	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_61638600_61640500
WTC11_00066460	chr3	+	2213	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAAAATGGGGACCAG	NA	False	NA	NA	False	NA	NA	NA	71230683	71232896	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_71230700_71232900
WTC11_00066461	chr3	+	5733	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATACCAGTGGACA	NA	False	NA	NA	False	NA	NA	NA	75997499	76003232	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_75997500_76003200
WTC11_00066462	chr3	+	1357	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATCTGGACATTCTT	NA	False	NA	NA	False	AATACA	-10	NA	76642341	76643698	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_76642300_76643700
WTC11_00066463	chr3	+	213	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATTGCAACTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	78586503	78586716	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78586500_78586700
WTC11_00066464	chr3	+	359	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAATAAAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	113494373	113494732	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_113494400_113494700
WTC11_00066465	chr3	+	822	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTTGGAAGTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	115796194	115797016	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115796200_115797000
WTC11_00066466	chr3	+	5498	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTCAGCGAAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	116105394	116110892	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_116105400_116110900
WTC11_00066467	chr3	+	275	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCCGCCTTCCTAACC	125595833	False	NA	NA	False	NA	NA	NA	125595867	125596142	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_125595900_125596100
WTC11_00066468	chr3	+	6989	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTTGAGGCATCTG	NA	False	NA	NA	False	NA	NA	NA	126451119	126458108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_126451100_126458100
WTC11_00066469	chr3	+	256	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATACCTCTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	128963684	128963940	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_128963700_128963900
WTC11_00066472	chr3	+	314	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGATATTGTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	166822882	166823196	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_166822900_166823200
WTC11_00066475	chr3	+	10744	1	Antisense	novelGene_ENSG00000288895.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATATAATCATATCACA	NA	False	NA	NA	False	NA	NA	NA	176286762	176297506	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_176286800_176297500
WTC11_00066480	chr3	+	1945	7	ISM	ENSG00000072756.17	ENST00000280591.10	2180	8	2089	169	27	-47	3prime_fragment	FALSE	canonical	2	13	junction_5	75.5367827985516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATGTGGTATCTGA	3129024	True	NA	NA	False	AATAAA	-26	NA	3129040	3148854	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
WTC11_00066481	chr3	+	840	1	FSM	ENSG00000271870.1	ENST00000607052.1	494	1	-347	1	-347	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTGTTATTTCTG	3152584	False	NA	14	True	AATAAA	-20	NA	3152594	3153434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3152600_3153400
WTC11_00066482	chr3	+	1431	5	FSM	ENSG00000071282.12	ENST00000426878.2	1431	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	21.834605560898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGCCGGACTCTTTCT	8501796	False	NA	NA	False	NA	NA	NA	8501806	8550449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8549873
WTC11_00066483	chr3	+	2885	10	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	26	junction_1	121.050953459001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358021	True	NA	5	True	TTTAAA	-18	NA	9363067	9384870	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9364194_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
WTC11_00066484	chr3	+	1705	9	NIC	ENSG00000134077.16	novel	3754	10	NA	NA	-21	11	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	144.612358998116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTGTAATTCCAGCAGT	9358030	True	NA	16	True	TTTAAA	-29	NA	9363076	9384881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9383198_9383310_9384211_9384336_9384523
WTC11_00066486	chr3	+	1599	4	ISM	ENSG00000168137.20	ENST00000431285.5	1824	10	12	9871	12	-4	5prime_fragment	FALSE	canonical	3	192	junction_3	23.6971634495683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAATGTGACTGCGCTG	9396283	True	NA	0	True	AATAAA	-13	NA	9397626	9430827	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826
WTC11_00066489	chr3	+	588	7	FSM	ENSG00000144550.14	ENST00000273027.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	14.7016627933336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGGGTGAGTAGGAA	9714824	False	NA	NA	False	NA	NA	NA	9715339	9726713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9715365_9715472_9715527_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664
WTC11_00066491	chr3	+	4176	8	FSM	ENSG00000214021.17	ENST00000483051.5	4176	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.18238775634773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTTTGCAGATGTAAATA	9813233	False	NA	NA	False	NA	NA	NA	9813247	9836315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9813346_9817644_9818921_9820545_9820742_9825799_9825949_9826996_9827241_9828959_9829396_9833103_9833246_9834680
WTC11_00066494	chr3	+	2457	17	FSM	ENSG00000163702.20	ENST00000483582.5	2467	17	10	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_7	10.1919085553198	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGTCTCCGTTTCAGTG	9916781	True	NA	42	True	AATAAA	-33	NA	9917107	9933630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819
WTC11_00066495	chr3	+	2388	18	NIC	ENSG00000163702.20	novel	2547	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	12.4996885774355	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGCAGACGCTGTTTT	9916836	True	NA	5	True	NA	NA	NA	9917162	9933593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924138_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
WTC11_00066496	chr3	+	633	8	FSM	ENSG00000163702.20	ENST00000451165.6	633	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	12.5405464842027	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCAGGTAGGAGCAGAG	9917056	False	NA	NA	False	NA	NA	NA	9917382	9924283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920559_9920603_9923880_9924021_9924231
WTC11_00066497	chr3	+	369	2	FSM	ENSG00000163702.20	ENST00000478206.1	597	2	97	131	97	92	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGAACTTCTGCCTTC	9920164	False	NA	NA	False	NA	NA	NA	9920490	9924137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9920603_9923880
WTC11_00066499	chr3	+	1693	9	ISM	ENSG00000163703.20	ENST00000673935.2	2020	10	565	329	-45	-1	3prime_fragment	FALSE	canonical	2	9	junction_6	54.604830372413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATCAGTCTTACTAC	9934325	False	NA	12	True	AATAAA	-20	NA	9934374	9945029	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9943076_9943173_9943380_9943516_9944364
WTC11_00066501	chr3	+	3965	1	FSM	ENSG00000269982.1	ENST00000602436.1	3823	1	-59	-83	-59	83	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACTGCTGGCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	9958657	9962622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9958700_9962600
WTC11_00066502	chr3	+	559	4	FSM	ENSG00000180385.9	ENST00000366264.6	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.36357401145817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCCCTGGCTCAACAAG	9983569	True	NA	NA	False	NA	NA	NA	9986892	10002765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9987265_9987905_9988008_9988711_9988748_10002716
WTC11_00066503	chr3	+	4329	43	FSM	ENSG00000144554.13	ENST00000676013.1	4334	43	5	0	5	0	multi-exon	FALSE	canonical	2	6	junction_17	24.3087659039541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCAGATAAATTGTTGC	10017812	True	NA	-20	True	NA	NA	NA	10026421	10101261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
WTC11_00066504	chr3	+	914	10	NIC	ENSG00000144554.13	novel	2145	21	NA	NA	-10	-9	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	39.5496250235849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATGCAACTTTTTATT	10017817	True	NA	NA	False	AATAAA	-8	NA	10026426	10040675	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10040536
WTC11_00066506	chr3	+	4033	31	NIC	ENSG00000144554.13	novel	3559	30	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	25.4619760078086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	10045590	False	NA	16	True	AATAAA	-16	NA	10045601	10101930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_10045745_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
WTC11_00066507	chr3	+	2952	7	ISM	ENSG00000157014.11	ENST00000448281.7	4937	8	83	2059	83	-6	5prime_fragment	FALSE	canonical	3	37	junction_4	6.15539510420646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTTGTTTTGAGTGA	10246904	True	NA	16	True	TATAAA	-18	NA	10248541	10279159	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884
WTC11_00066509	chr3	+	1498	2	ISM	ENSG00000240288.8	ENST00000605014.5	921	4	1660	3543	-543	-3206	internal_fragment	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAGCCCCTGAGTAAAA	10287400	False	NA	NA	False	NA	NA	NA	10287413	10289374	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_10287482_10287944
WTC11_00066510	chr3	+	535	6	FSM	ENSG00000197548.13	ENST00000451830.5	549	6	14	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_5	42.1834090609092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCACAGCTCTTCCTTA	11270095	True	NA	NA	False	NA	NA	NA	11272361	11315388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11315343
WTC11_00066511	chr3	+	358	4	FSM	ENSG00000197548.13	ENST00000419112.5	565	4	207	0	187	0	multi-exon	FALSE	canonical	1	1	junction_1	50.9116882454314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACACTCGAGTCTTTC	11270363	False	NA	NA	False	NA	NA	NA	11272629	11306995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11272710_11298685_11298856_11299361_11299417_11306942
WTC11_00066513	chr3	+	596	1	FSM	ENSG00000272483.1	ENST00000606330.1	596	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTCATTTAATTAGG	NA	False	NA	NA	False	ATTAAA	-22	NA	11611601	11612197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11611600_11612200
WTC11_00066515	chr3	+	2932	12	FSM	ENSG00000154743.19	ENST00000680986.1	2934	12	0	2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	37.3106237501881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTGTCTCAAAAAAAAAAAA	12482157	False	NA	NA	False	AATAGA	-8	NA	12484604	12533651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12485192_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
WTC11_00066516	chr3	+	3624	8	FSM	ENSG00000075975.17	ENST00000677941.1	3610	8	-14	0	-14	0	multi-exon	FALSE	canonical	1	4	junction_7	73.2694217478568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGCTTGTTAAGGACTC	12554293	True	NA	-11	True	AATATA	-3	NA	12557042	12585800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12582343_12583787
WTC11_00066517	chr3	+	1643	7	NIC	ENSG00000163517.15	novel	1559	10	NA	NA	16	100	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.8759126793731	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGGGAGGAATTCTTAG	13479573	True	NA	108	True	NA	NA	NA	13480359	13505434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
WTC11_00066520	chr3	+	495	5	FSM	ENSG00000177463.16	ENST00000435454.5	495	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.96865172858795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCTTTGAACAAAGAGAA	14947688	True	NA	NA	False	NA	NA	NA	14947704	15004592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14947907_14959156_14959197_14959535_14959642_15003875_15003987_15004556
WTC11_00066521	chr3	+	804	4	FSM	ENSG00000131375.10	ENST00000457023.1	854	4	0	50	0	-50	multi-exon	FALSE	canonical	1	2	junction_1	53.0722777603022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAGTTTACAATTAA	15204184	True	NA	NA	False	AATAGA	-10	NA	15206220	15220981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15206598_15217424_15217583_15218472_15218541_15220780
WTC11_00066522	chr3	+	221	2	Genic_Genomic	ENSG00000263740.2	novel	295	1	NA	NA	-929	-83	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCCGTGCTGATCAG	NA	False	NA	NA	False	NA	NA	NA	15737585	15738726	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_+_15737607_15738526
WTC11_00066523	chr3	+	230	1	FSM	ENSG00000224728.1	ENST00000413639.1	1525	1	25	1270	25	-1270	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTATTGGTTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	15878071	15878301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15878100_15878300
WTC11_00066524	chr3	+	1281	1	FSM	ENSG00000271964.1	ENST00000607464.1	549	1	-613	-119	-613	119	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTGTGGTTTTGTTTT	NA	False	NA	4	True	TATAAA	-12	NA	16313825	16315106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16313800_16315100
WTC11_00066525	chr3	+	573	1	FSM	ENSG00000227309.1	ENST00000449897.1	361	1	-52	-160	-52	160	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTGATACTTCCT	NA	False	NA	NA	False	TATAAA	-3	NA	17465097	17465670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17465100_17465700
WTC11_00066526	chr3	+	2078	3	NNC	ENSG00000274840.4	novel	339	5	NA	NA	-7699	302597	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGTGTATAGGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	18005526	18344200	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_18005558_18041448_18041542_18342246
WTC11_00066527	chr3	+	307	3	FSM	ENSG00000274840.4	ENST00000624232.1	307	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTATGTTCACATT	NA	False	NA	NA	False	NA	NA	NA	18013654	18041541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18013775_18016617_18016712_18041448
WTC11_00066528	chr3	+	768	5	FSM	ENSG00000228956.9	ENST00000414198.6	768	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	9.89949493661167	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCAGCATAGGTGTTT	18444912	False	NA	NA	False	AATAAA	-41	NA	18445023	18526539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18526386
WTC11_00066529	chr3	+	341	2	FSM	ENSG00000228956.9	ENST00000609327.2	982	2	641	0	-41	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAACTGGATGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	18464286	18466250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18464340_18465962
WTC11_00066530	chr3	+	753	2	FSM	ENSG00000144566.11	ENST00000443878.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATATGCCAGTTCAAA	19931745	False	NA	12	True	NA	NA	NA	19947249	19950944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_19947864_19950805
WTC11_00066531	chr3	+	406	1	ISM	ENSG00000114166.8	ENST00000263754.5	4410	18	112236	1317	4442	-1317	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAGTTCCAGGAAAGCA	NA	False	NA	NA	False	TTTAAA	-39	NA	20152681	20153087	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_20152700_20153100
WTC11_00066532	chr3	+	580	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	-16	0	0	0	multi-exon	FALSE	canonical	2	323	junction_1	11248.7972986745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	23669530	True	NA	13	True	AATAAA	-2	NA	23917131	23919537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
WTC11_00066534	chr3	+	3154	5	FSM	ENSG00000174748.22	ENST00000456530.7	3182	5	-7	35	0	-35	multi-exon	FALSE	canonical	0	0	junction_4	10010.6699825736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGCTATATTAATAAAT	23669530	True	NA	87	True	NA	NA	NA	23917131	23924339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195_23919247_23921597
WTC11_00066535	chr3	+	600	2	FSM	ENSG00000174738.13	ENST00000472780.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGCAGGTAAGCAAGC	23964751	False	NA	NA	False	NA	NA	NA	23964763	23968013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23965163_23967812
WTC11_00066536	chr3	+	3118	8	FSM	ENSG00000077092.20	ENST00000330688.9	3132	8	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTTACT	25428263	True	NA	NA	False	AATAAA	-17	NA	25428276	25597932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_25428889_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
WTC11_00066537	chr3	+	299	1	FSM	ENSG00000272282.1	ENST00000606069.1	1096	1	538	259	538	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCGACAATTCCCAGCTT	27713434	False	NA	NA	False	NA	NA	NA	27713447	27713746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27713400_27713700
WTC11_00066538	chr3	+	788	2	FSM	ENSG00000187118.14	ENST00000469102.1	788	2	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	NA	False	NA	19	True	AATAAA	-15	NA	28315900	28319773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28316424_28319508
WTC11_00066539	chr3	+	8286	14	NIC	ENSG00000144642.22	novel	8540	15	NA	NA	119	4	intron_retention	FALSE	canonical	0	0	junction_1	7.77417968807547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTTTTTCTGCAC	29281164	False	NA	NA	False	AATAAA	-28	NA	29281191	30010395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_29281757_29434745_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29988142_29988224_29991081_29991210_30003855
WTC11_00066541	chr3	+	1664	10	FSM	ENSG00000163527.10	ENST00000423527.5	1664	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_9	205.125977552007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	31529287	True	NA	NA	False	NA	NA	NA	31532971	31620274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31619964
WTC11_00066542	chr3	+	370	1	FSM	ENSG00000235670.1	ENST00000428586.1	483	1	52	61	52	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACCAATGGGAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	32030247	32030617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32030200_32030600
WTC11_00066544	chr3	+	997	3	FSM	ENSG00000170293.9	ENST00000458535.6	996	3	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	28	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	32236579	True	NA	24	True	ATTAAA	-17	NA	32238677	32370321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32239120_32367871_32367989_32369883
WTC11_00066546	chr3	+	2361	15	FSM	ENSG00000153558.16	ENST00000421391.5	1581	15	-17	-763	-6	0	multi-exon	FALSE	canonical	2	5	junction_6	4.10077145554495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAAGTCAGAGG	33277196	True	NA	NA	False	AATAAA	-16	NA	33277459	33386625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373240_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
WTC11_00066548	chr3	+	208	1	FSM	ENSG00000236165.1	ENST00000412317.1	525	1	25	292	25	-292	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGGCTGCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	36976340	36976548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36976300_36976500
WTC11_00066549	chr3	+	7673	23	FSM	ENSG00000144674.17	ENST00000356847.8	7673	23	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_18	70.4285582571574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTTGTTTATTGTAC	37238527	True	NA	4	True	AATAAA	-14	NA	37243251	37366745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37366079
WTC11_00066550	chr3	+	2123	16	FSM	ENSG00000144668.12	ENST00000422441.5	2282	16	-24	183	-24	-183	multi-exon	FALSE	canonical	2	6	junction_6	4.71121593174793	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGAACCTTAAAGCTCAT	37452079	False	NA	NA	False	AAAAAG	-28	NA	37452090	37629336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186
WTC11_00066551	chr3	+	806	5	ISM	ENSG00000136059.16	ENST00000484717.5	2072	10	11	4311	11	982	5prime_fragment	FALSE	canonical	2	8	junction_4	2.87228132326901	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGGCCTGGCCCCAG	37993914	True	NA	NA	False	NA	NA	NA	37994163	37998169	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089
WTC11_00066552	chr3	+	1888	12	ISM	ENSG00000136059.16	ENST00000383759.7	2831	20	7449	1	-83	0	3prime_fragment	FALSE	canonical	2	7	junction_1	4.45361771415123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTGTGGTATGCGTGC	37997985	False	NA	5	True	AGTAAA	-15	NA	37998234	38007184	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167_38003314_38004254_38004400_38005791_38005975_38006180_38006253_38006448_38006701_38006941
WTC11_00066553	chr3	+	244	2	FSM	ENSG00000008226.20	ENST00000477260.1	533	2	289	0	289	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCTGGGTAAGCGCCA	NA	False	NA	NA	False	NA	NA	NA	38110098	38111737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38110282_38111676
WTC11_00066554	chr3	+	206	2	FSM	ENSG00000172939.9	ENST00000492714.1	471	2	265	0	-151	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGAAAGTGGCAATC	38165275	False	NA	NA	False	NA	NA	NA	38165353	38183047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38165515_38183002
WTC11_00066557	chr3	+	7426	2	NNC	ENSG00000114739.14	novel	11782	11	NA	NA	12221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	38485648	False	NA	9	True	AATAAA	-16	NA	38485666	38493142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_38492732_38492781
WTC11_00066560	chr3	+	423	2	FSM	ENSG00000168026.19	ENST00000466875.1	582	2	150	9	-131	-9	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAGAGGCCTCACAG	NA	False	NA	NA	False	NA	NA	NA	39128960	39130151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39129311_39130078
WTC11_00066562	chr3	+	1485	10	FSM	ENSG00000168026.19	ENST00000493856.5	1825	10	331	9	77	-6	multi-exon	FALSE	canonical	2	4	junction_2	3.82970843102535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCATTTCTATAGTGTA	NA	False	NA	-5	True	NA	NA	NA	39133051	39138893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39133241_39134217_39134329_39135092_39135175_39136356_39136508_39136898_39137061_39137194_39137388_39137485_39137711_39138266_39138388_39138555_39138624_39138710
WTC11_00066565	chr3	+	1037	7	NNC	ENSG00000168028.14	novel	1140	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_6	1975.08115163797	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39368036	True	NA	5	True	AATAAA	-16	NA	39406715	39412438	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_39406765_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412276
WTC11_00066567	chr3	+	2191	4	FSM	ENSG00000177873.14	ENST00000520737.5	2192	4	1	0	1	0	multi-exon	FALSE	canonical	3	4	junction_2	6.94422221866655	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACTAGGAGAAATGCAA	40476168	True	NA	NA	False	NA	NA	NA	40477142	40488578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40477358_40477917_40478004_40482587_40482705_40486805
WTC11_00066568	chr3	+	5122	2	Genic_Genomic	ENSG00000172888.12	novel	2404	6	NA	NA	-44382	-205	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTGGAAGCAAACCT	40479521	False	NA	33	True	AATAAA	-44	NA	40480495	40539577	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_+_40480512_40534471
WTC11_00066569	chr3	+	3909	3	NIC	ENSG00000177842.12	novel	533	5	NA	NA	-3	822	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGTTTTAATTTGCA	NA	False	NA	NA	False	TTTAAA	-33	NA	40505988	40519558	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_40506126_40506303_40506377_40515859
WTC11_00066576	chr3	+	887	4	Fusion	ENSG00000008324.12_ENSG00000289558.1	novel	2697	3	NA	NA	295	-118	multi-exon	FALSE	canonical	3	21	junction_1	551.565650368718	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGTGGAGGTATAGAAG	42581057	False	NA	19	True	AATAAA	-21	NA	42582432	42594996	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_42582510_42590808_42590967_42591524_42591602_42594421
WTC11_00066578	chr3	+	7297	17	NNC	ENSG00000114857.19	novel	7265	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	50.7675077559456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	42592209	True	NA	4	True	ATTAAA	-18	NA	42600656	42648735	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42621428_42621517_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643898_42644004_42645887
WTC11_00066581	chr3	+	3489	6	NIC	ENSG00000196345.13	novel	3477	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	9.94786409235671	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	44553916	True	NA	11	True	AATAAA	-18	NA	44555192	44572158	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_44555519_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569924
WTC11_00066582	chr3	+	1692	6	FSM	ENSG00000196345.13	ENST00000431636.5	1692	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	12.5155902777296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGAATATTTGTCAAT	44553916	True	NA	-16	True	AAGAAA	-35	NA	44555192	44583445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44555482_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44582971
WTC11_00066583	chr3	+	7619	7	Fusion	ENSG00000144792.9_ENSG00000186448.15	novel	4299	5	NA	NA	32	0	multi-exon	TRUE	canonical	3	13	junction_2	14.3807355707403	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44583253	True	NA	9	True	AATAAA	-19	NA	44584919	44648471	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_44585008_44586104_44586214_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
WTC11_00066584	chr3	+	3156	3	FSM	ENSG00000196653.12	ENST00000449836.5	3173	3	11	6	-6	-6	multi-exon	FALSE	canonical	0	0	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAATGCTTGGTTATT	44712296	True	NA	3	True	ATTAAA	-14	NA	44712653	44723823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44712745_44720202_44720317_44720872
WTC11_00066585	chr3	+	4782	36	NNC	ENSG00000163808.17	novel	4760	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	41.0969585249322	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	44759112	True	NA	9	True	AATAAA	-21	NA	44761793	44853256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802306_44802329_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
WTC11_00066586	chr3	+	3087	2	FSM	ENSG00000169964.8	ENST00000477126.1	3071	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	105	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGGTATCTTAATTCTT	44860386	True	NA	18	True	AATAAA	-28	NA	44861887	44865670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44864344_44865039
WTC11_00066587	chr3	+	1428	9	FSM	ENSG00000075914.13	ENST00000461361.5	1593	9	165	0	49	0	multi-exon	FALSE	canonical	2	5	junction_1	501.542230898855	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTGATTCCAGTGGAT	44975390	False	NA	13	True	AATAAA	-21	NA	44975405	45012666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44975477_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
WTC11_00066589	chr3	+	1102	2	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTCATCATAAAGGTCTT	46584585	False	NA	NA	False	AATATA	-23	NA	46584647	46585961	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46585237_46585448
WTC11_00066590	chr3	+	3622	1	FSM	ENSG00000160796.18	ENST00000651453.1	4411	1	936	-147	293	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCGTCTCCGAGTGT	47006067	False	NA	28	True	AATAAA	-18	NA	47006079	47009701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47006100_47009700
WTC11_00066591	chr3	+	4727	10	NNC	ENSG00000114648.12	novel	4622	10	NA	NA	-60	3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	22.2516471855262	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCTTTCTTGGTTTAT	47282792	True	NA	15	True	AATAAA	-20	NA	47282856	47346819	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336519_47336758_47340571_47340677_47342718_47342831_47343554
WTC11_00066592	chr3	+	2003	1	FSM	ENSG00000280173.1	ENST00000624214.1	2124	1	-38	159	-38	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCAACCATTATCACCA	NA	False	NA	NA	False	AGTAAA	-10	NA	47346911	47348914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47346900_47348900
WTC11_00066594	chr3	+	219	1	NIC	ENSG00000164049.14	novel	2188	9	NA	NA	20975	-329	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTAATTTTTAAACAGT	NA	False	NA	NA	False	NA	NA	NA	48400711	48400930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_48400700_48400900
WTC11_00066596	chr3	+	3924	2	FSM	ENSG00000224424.8	ENST00000669166.1	3944	2	20	0	17	0	multi-exon	FALSE	canonical	2	2	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATAGGTTTGTTATTC	48847924	False	NA	-3	True	AATGAA	-19	NA	48847973	48851976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48848026_48848104
WTC11_00066601	chr3	+	2120	17	NNC	ENSG00000177479.20	novel	2278	17	NA	NA	87	-9	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	166.182505096054	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGCAAACTATA	48909361	False	NA	-65	True	NA	NA	NA	48918981	48983611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48918999_48922747_48922812_48924717_48924840_48927464_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
WTC11_00066604	chr3	+	2408	7	NNC	ENSG00000185909.15	novel	1972	6	NA	NA	-1090	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	19.8109116958867	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49170461	False	NA	14	True	AGTAAA	-18	NA	49170507	49176486	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_49170807_49171460_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
WTC11_00066605	chr3	+	5674	4	FSM	ENSG00000173402.12	ENST00000541308.5	5676	4	0	2	0	1	multi-exon	FALSE	canonical	1	1	junction_1	204.845199005384	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTTGCATCTGGGCATCT	49462161	True	NA	NA	False	AATAAA	-21	NA	49470131	49535616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49492822_49492974_49510418_49510820_49530796
WTC11_00066609	chr3	+	575	7	FSM	ENSG00000003756.17	ENST00000404526.6	580	7	5	0	5	0	multi-exon	FALSE	canonical	2	4	junction_4	78.2036160005121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCAATGCATTATAGC	50085676	True	NA	NA	False	AAAAAG	-20	NA	50088923	50103107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093784_50099981_50100052_50100531_50100606_50103082
WTC11_00066613	chr3	+	2438	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	515	0	-515	multi-exon	FALSE	canonical	1	2	junction_8	1.72046505340853	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGCTGTGTTTTCTAT	50205166	True	NA	4	True	TATAAA	-12	NA	50205270	50220971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
WTC11_00066615	chr3	+	2237	10	NNC	ENSG00000114353.17	novel	2219	9	NA	NA	0	48345	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	380.024105798112	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAAAGGAGGG	50219063	True	NA	NA	False	NA	NA	NA	50236203	50307707	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367_50259354_50307680
WTC11_00066616	chr3	+	934	7	FSM	ENSG00000012171.20	ENST00000621029.4	934	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.40947204913349	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGACTCCCGCTGGCTCAA	50267545	False	NA	NA	False	NA	NA	NA	50267557	50271458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50267770_50269160_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360
WTC11_00066617	chr3	+	1198	8	ISM	ENSG00000114735.10	ENST00000232854.9	16993	11	16	17023	16	-1529	5prime_fragment	FALSE	canonical	3	33	junction_1	12.5568096819118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGACCTGTTTCCT	50569015	True	NA	NA	False	ACTAAA	-21	NA	50569537	50579143	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820
WTC11_00066618	chr3	+	446	3	FSM	ENSG00000114738.11	ENST00000497283.1	793	3	209	138	209	79	multi-exon	FALSE	canonical	1	1	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACCATGGGTGTCCCT	50612516	False	NA	NA	False	NA	NA	NA	50612536	50613979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50612700_50612847_50612943_50613791
WTC11_00066619	chr3	+	2094	1	FSM	ENSG00000273356.1	ENST00000608605.1	2060	1	-34	0	-34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATTTAATTAATTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	50669954	50672048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50670000_50672000
WTC11_00066620	chr3	+	8926	51	NIC	ENSG00000088538.13	novel	9069	53	NA	NA	-59	-28	combination_of_known_splicesites	TRUE	canonical	2	3	junction_26	16.0249804992081	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATTAAAGATAAATACGT	50674857	False	NA	-18	True	NA	NA	NA	50674867	51384170	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51089242_51089285_51090229_51090385_51146548_51146631_51159243_51159305_51160554_51160703_51208773_51208863_51214121_51214248_51225648_51225774_51227282_51227446_51227981_51228089_51228660_51228833_51229511_51229610_51236344_51236429_51237489_51237591_51246725_51246808_51260155_51260327_51270814_51271008_51275078_51275207_51280105_51280205_51310231_51310327_51312003_51312080_51312475_51312577_51312843_51312903_51314979_51315129_51330137_51330224_51333157_51333254_51338358_51338420_51338934_51339029_51341236_51341386_51348851_51348939_51350287_51350393_51354881_51355024_51356088_51356256_51356406_51356494_51356961_51357142_51357757_51357842_51357960_51358078_51360510_51360633_51361858_51361998_51362526_51362675_51374468_51374588_51375747_51375836_51380124_51380208_51381049
WTC11_00066621	chr3	+	568	1	FSM	ENSG00000164080.14	ENST00000602430.1	727	1	20	139	20	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTACTCTTCATTCTGA	51535854	False	NA	NA	False	CATAAA	-29	NA	51541163	51541731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51541200_51541700
WTC11_00066622	chr3	+	7242	9	NNC	ENSG00000164081.13	novel	531	3	NA	NA	-21578	-15807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.453835214942	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGTGTTGTTTGATC	NA	False	NA	12	True	AATAAA	-13	NA	51641114	51668660	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_51641150_51641748_51641868_51643874_51643975_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
WTC11_00066623	chr3	+	2402	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	-112	0	-32	0	multi-exon	FALSE	canonical	2	10	junction_1	64.8628360465375	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	51671126	False	NA	-29	True	NA	NA	NA	51671142	51704283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
WTC11_00066625	chr3	+	771	4	FSM	ENSG00000041880.15	ENST00000475782.1	771	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCATCATGCCACATTC	51944693	False	NA	NA	False	NA	NA	NA	51944786	51946261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51945225_51945494_51945645_51945852_51945940_51946165
WTC11_00066627	chr3	+	2300	1	FSM	ENSG00000180929.6	ENST00000322241.6	2119	1	-201	20	-201	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAGGGATTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51955179	51957479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51955200_51957500
WTC11_00066630	chr3	+	951	5	FSM	ENSG00000168237.18	ENST00000473032.5	935	5	-16	0	-16	0	multi-exon	FALSE	canonical	1	1	junction_3	3.11247489949718	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTCTCAGTGCGCCT	52287104	True	NA	10	True	AATAAA	-12	NA	52287803	52293469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52293045_52293193_52293306
WTC11_00066634	chr3	+	1978	18	NIC	ENSG00000157445.15	novel	3789	38	NA	NA	34	-6411	combination_of_known_junctions	TRUE	canonical	1	4	junction_5	27.5017457766093	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCGCTGAGATCATTT	54122189	True	NA	-1	True	AATAAA	-2	NA	54122585	54879175	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_54122836_54123512_54123595_54320441_54320559_54386714_54386775_54503491_54503655_54562799_54562932_54569794_54569856_54569953_54570105_54581802_54581878_54627786_54627877_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
WTC11_00066635	chr3	+	205	1	FSM	ENSG00000229806.1	ENST00000449885.1	432	1	247	-20	247	20	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCACATGGTTCCAGTCAA	54626451	False	NA	NA	False	AATAAA	-2	NA	54626461	54626666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_54626500_54626700
WTC11_00066636	chr3	+	2528	27	NNC	ENSG00000157445.15	novel	760	7	NA	NA	-345819	0	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_20	18.9199888036796	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTGTTTGGATTTTAT	54641175	True	NA	6	True	AATAAA	-18	NA	54641858	55074557	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017_54879090_54880795_54880864_54885280_54885327_54885488_54885587_54887958_54888053_54891354_54891451_54896748_54896871_54899787_54899869_54968449_54968512_54969799_54969845_54984607_54984671_54987682_54987754_55004762_55004839_55007789_55007843_55009387_55009444_55018205_55018318_55073444_55073558_55073776_55073860_55074113
WTC11_00066638	chr3	+	1159	1	FSM	ENSG00000272202.1	ENST00000607541.1	1159	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	625	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAGCGGTGCATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	57078942	57080101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57078900_57080100
WTC11_00066639	chr3	+	2806	24	FSM	ENSG00000157500.12	ENST00000650354.1	2821	24	15	0	12	0	multi-exon	FALSE	canonical	0	0	junction_22	70.7459845427463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATCATTTAATCAG	57222709	True	NA	-17	True	NA	NA	NA	57227740	57278105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540_57269752_57276303_57276460_57277792
WTC11_00066640	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	115.805783930841	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222842	True	NA	7	True	AATAGA	-15	NA	57227873	57242892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
WTC11_00066641	chr3	+	3049	2	FSM	ENSG00000174840.9	ENST00000487257.1	3040	2	-9	0	-7	0	multi-exon	FALSE	canonical	3	157	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCATCTTTCATTT	57553230	True	NA	9	True	AATAAA	-17	NA	57556266	57560937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57557688_57559309
WTC11_00066642	chr3	+	427	1	FSM	ENSG00000272146.6	ENST00000658756.1	588	1	157	4	-27	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGTTGAGGAAGCGGAA	57597674	False	NA	-1	True	ATTAAA	-10	NA	57597687	57598114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57597700_57598100
WTC11_00066643	chr3	+	552	3	FSM	ENSG00000272146.6	ENST00000607782.1	552	3	-7	7	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAATCTTTCTTATTT	57597690	True	NA	NA	False	AATAAA	-37	NA	57597788	57600920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57598052_57600058_57600170_57600742
WTC11_00066644	chr3	+	5495	24	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	41.4724724791635	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGTTTGAGTTGAATAT	57751170	True	NA	18	True	AATAAA	-19	NA	57756308	57929168	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
WTC11_00066645	chr3	+	5273	21	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	41.1735351894879	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	57757335	False	NA	3	True	ATTAAA	-18	NA	57757456	57930003	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
WTC11_00066646	chr3	+	3554	16	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	60.5502179095079	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGCATGTTTGAGTTGAAT	57860739	True	NA	16	True	AATAAA	-17	NA	57860773	57929166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57865241_57865293_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57927295
WTC11_00066647	chr3	+	603	1	FSM	ENSG00000213509.4	ENST00000462517.1	487	1	8	-124	8	124	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTCCTTATTCCT	NA	False	NA	NA	False	NA	NA	NA	57941825	57942428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57941800_57942400
WTC11_00066649	chr3	+	2076	9	NNC	ENSG00000163686.15	novel	2393	9	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	22.477766792989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGGTGGTTTCTATT	58237497	False	NA	11	True	AATAAA	-22	NA	58237850	58294733	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293585
WTC11_00066651	chr3	+	2817	18	FSM	ENSG00000168297.16	ENST00000479241.5	2817	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	31.0500210342662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGTCTGTAGCT	58332411	True	NA	10	True	ATTAAA	-12	NA	58332947	58426019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58333091_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412903_58412964_58423460_58423495_58424751
WTC11_00066652	chr3	+	564	2	FSM	ENSG00000168301.13	ENST00000479179.1	564	2	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTCTTGGAGATG	58492413	False	NA	NA	False	GGGGCT	-6	NA	58493914	58498782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58494409_58498712
WTC11_00066654	chr3	+	608	3	FSM	ENSG00000163635.20	ENST00000466529.1	758	3	0	150	0	-139	multi-exon	FALSE	canonical	3	13	junction_1	4	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCAGGCCCTCCAACT	63982171	False	NA	NA	False	AGTAAA	-30	NA	63982186	63988324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_63982446_63982938_63983022_63988058
WTC11_00066655	chr3	+	6619	1	FSM	ENSG00000163635.20	ENST00000643453.1	3268	1	714	-4065	714	2606	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGAAGGCATTGAGAT	NA	False	NA	NA	False	AGTAAA	-8	NA	63999449	64006068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_63999400_64006100
WTC11_00066657	chr3	+	3934	2	NNC	ENSG00000172986.13	novel	3276	7	NA	NA	20740	4410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATTAGTTATCTATGT	72975940	False	NA	5	True	AATAAA	-17	NA	72975954	72981325	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_72978049_72979485
WTC11_00066658	chr3	+	1075	1	FSM	ENSG00000236138.4	ENST00000489078.1	1255	1	15	165	15	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGTTAGATGAGCT	75668933	False	NA	NA	False	NA	NA	NA	75668945	75670020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75668900_75670000
WTC11_00066659	chr3	+	5339	22	ISM	ENSG00000185008.17	ENST00000332191.12	5437	27	-1322	28936	-478	0	5prime_fragment	FALSE	canonical	1	4	junction_6	6.99205898780101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTGATTAATTCTGT	77039386	True	NA	NA	False	AATAAA	-24	NA	77039407	77618180	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_77040847_77098013_77098341_77477413_77477572_77481098_77481220_77493243_77493383_77522774_77522903_77546337_77546463_77550817_77550990_77557943_77558150_77562650_77562733_77563166_77563330_77564953_77565121_77568312_77568435_77574498_77574731_77577489_77577615_77579946_77580119_77588750_77588934_77595141_77595185_77596622_77596751_77602209_77602492_77607797_77607955_77617512
WTC11_00066663	chr3	+	10732	21	NIC	ENSG00000080200.10	novel	10779	22	NA	NA	-20	0	intron_retention	FALSE	canonical	3	14	junction_1	11.8220133649053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	97820078	True	NA	29	True	AATAAA	-34	NA	97821990	97944984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_97822356_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
WTC11_00066664	chr3	+	765	3	FSM	ENSG00000289078.1	ENST00000689432.1	677	3	13	-101	13	101	multi-exon	FALSE	canonical	3	8	junction_2	2	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCATTTATTGCATTGA	98191130	True	NA	NA	False	TATAAA	-16	NA	98191371	98196856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98191611_98193423_98193499_98196405
WTC11_00066665	chr3	+	2359	1	FSM	ENSG00000244153.1	ENST00000466609.1	2769	1	309	101	309	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAATCTCTTGGATCTA	NA	False	NA	NA	False	AAAAAG	-37	NA	98658110	98660469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98658100_98660500
WTC11_00066666	chr3	+	3399	10	FSM	ENSG00000064225.13	ENST00000613264.5	3399	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.6946165182307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGATGGCGCTGGT	98732663	False	NA	NA	False	AATAAA	-19	NA	98732703	98795845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98733012_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
WTC11_00066667	chr3	+	247	2	FSM	ENSG00000064225.13	ENST00000465004.1	314	2	61	6	61	-6	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCAAAGGCAACACCAC	98733469	False	NA	NA	False	NA	NA	NA	98733516	98756540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98733592_98756368
WTC11_00066669	chr3	+	623	1	FSM	ENSG00000249274.1	ENST00000504327.1	1006	1	107	276	107	-276	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTCAGTCTATTACTC	NA	False	NA	NA	False	GATAAA	-38	NA	98782294	98782917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98782300_98782900
WTC11_00066670	chr3	+	560	5	FSM	ENSG00000036054.13	ENST00000471098.1	559	5	-1	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_1	151.066210649503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGATACAAAGAAAATTAC	100267176	False	NA	NA	False	NA	NA	NA	100267190	100290656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100267249_100279648_100279761_100281741_100281848_100283606_100283812_100290577
WTC11_00066672	chr3	+	877	9	NIC	ENSG00000114021.12	novel	7233	10	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	114.450862818941	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTTTTTTTAATTCGG	100331972	True	NA	6	True	ATTAAA	-12	NA	100334750	100355348	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100348802_100348882_100352403_100352503_100354771_100354828_100355176
WTC11_00066673	chr3	+	1353	6	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	84.9861165132282	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTCTGTGGTGACT	100491971	True	NA	3	True	ATTAAA	-16	NA	100492618	100570914	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100570608
WTC11_00066676	chr3	+	1854	8	FSM	ENSG00000114354.15	ENST00000675243.1	1854	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	259.623039133625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709149	False	NA	12	True	AATAAA	-15	NA	100709535	100748964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713653_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
WTC11_00066677	chr3	+	2466	1	FSM	ENSG00000256628.3	ENST00000609682.1	2743	1	25	252	25	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATTGTCTTCCTGAGT	101676260	True	NA	NA	False	AATAAA	-15	NA	101676499	101678965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101676500_101679000
WTC11_00066678	chr3	+	742	1	FSM	ENSG00000244119.2	ENST00000489621.1	720	1	42	-64	42	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAGAATGAATCCTT	NA	False	NA	NA	False	AAAAAG	-3	NA	101712513	101713255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101712500_101713300
WTC11_00066679	chr3	+	806	3	FSM	ENSG00000144802.11	ENST00000465476.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGCAATGTATGGGT	101854635	False	NA	NA	False	NA	NA	NA	101854647	101856017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101854684_101855061_101855209_101855394
WTC11_00066680	chr3	+	548	3	FSM	ENSG00000144802.11	ENST00000477601.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAAAAATATCTA	101855720	False	NA	NA	False	ATTAAA	-2	NA	101855732	101859527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101855903_101857291_101857460_101859317
WTC11_00066681	chr3	+	628	1	FSM	ENSG00000276763.1	ENST00000610665.1	382	1	-234	-12	-234	12	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCCCTTATTCATGCT	NA	False	NA	NA	False	NA	NA	NA	108574448	108575076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_108574400_108575100
WTC11_00066682	chr3	+	5545	33	NIC	ENSG00000198919.13	novel	5304	33	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.5033009028738	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	108587525	True	NA	4	True	AATAAA	-16	NA	108589737	108694840	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
WTC11_00066683	chr3	+	1908	5	NNC	ENSG00000289358.1	novel	913	3	NA	NA	-6	-24509	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4.86698058348295	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCAGACCAAGACTCCGT	109336623	True	NA	NA	False	NA	NA	NA	109337764	109355465	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_109337981_109343506_109343651_109346915_109347174_109352998_109353223_109354399
WTC11_00066685	chr3	+	7616	4	FSM	ENSG00000240891.8	ENST00000636933.1	7710	4	7	87	7	-87	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACATTTTGTTATTG	111674400	True	NA	18	True	AATAAA	-35	NA	111674682	111726909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111675409_111707925_111708387_111713886_111714129_111720722
WTC11_00066688	chr3	+	1499	2	Antisense	novelGene_ENSG00000243081.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGCAGTACAGCCTAGGT	112405984	False	NA	NA	False	AAGAAA	-42	NA	112406171	112419927	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_112406195_112418451
WTC11_00066689	chr3	+	1000	2	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTCAGCGAAGGGAGAT	112421846	False	NA	NA	False	NA	NA	NA	112421883	112423008	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112422151_112422275
WTC11_00066691	chr3	+	3484	13	FSM	ENSG00000144857.15	ENST00000479182.5	4882	13	1398	0	1398	0	multi-exon	FALSE	canonical	2	4	junction_4	3.77399729140808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAACTGAGTCATGTG	NA	False	NA	8	True	AATAAA	-20	NA	113272409	113287451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113272704_113273068_113273342_113274374_113274683_113278094_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284859_113285371_113285566_113286674
WTC11_00066693	chr3	+	4890	6	NNC	ENSG00000184307.17	novel	3778	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	21.2169743366013	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTTCTTGGAGT	113947980	False	NA	7	True	AATAAA	-20	NA	113948012	113962982	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_113948191_113948768_113948964_113953699_113954411_113956338_113956507_113958362_113958539_113959520
WTC11_00066696	chr3	+	958	2	NNC	ENSG00000242880.2	novel	1118	7	NA	NA	78067	54	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATCCCCACGTATTGA	NA	False	NA	NA	False	NA	NA	NA	115317945	115370454	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_115318508_115370058
WTC11_00066697	chr3	+	1226	6	NIC	ENSG00000113845.10	novel	2379	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	226.440809042893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	119489261	True	NA	14	True	AATAAA	-21	NA	119498586	119524066	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_119498928_119500694_119500861_119503953_119504022_119513640_119513720_119517204_119517316_119523605
WTC11_00066701	chr3	+	214	1	FSM	ENSG00000244441.1	ENST00000496098.1	339	1	20	105	20	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGCCAAATGTGCCT	NA	False	NA	NA	False	AAAACA	-24	NA	120512869	120513083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120512900_120513100
WTC11_00066702	chr3	+	328	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	-19	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	120567629	True	NA	22	True	AATAAA	-14	NA	120596327	120602323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120596540_120602207
WTC11_00066703	chr3	+	260	1	FSM	ENSG00000213371.4	ENST00000462291.1	880	1	699	-79	699	79	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTTTTTTCTTGGTAGA	NA	False	NA	NA	False	NA	NA	NA	120806564	120806824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120806600_120806800
WTC11_00066704	chr3	+	898	8	ISM	ENSG00000145087.13	ENST00000472879.5	3067	23	-90	255107	-6	-6407	5prime_fragment	FALSE	canonical	2	11	junction_3	7.59699188589047	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGATTTCTACCGACAT	120907170	True	NA	NA	False	NA	NA	NA	120908198	121152561	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476
WTC11_00066705	chr3	+	1534	13	ISM	ENSG00000145087.13	ENST00000472879.5	3067	23	249234	28823	247952	-28823	internal_fragment	FALSE	canonical	3	10	junction_2	4.12310562561766	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCTGCATGGAGATTT	NA	False	NA	NA	False	AGTAAA	-43	NA	121157522	121378845	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804_121279957_121318474_121318541_121378715
WTC11_00066706	chr3	+	209	3	FSM	ENSG00000121552.4	ENST00000264474.4	744	3	68	467	54	-467	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTGGTACTTACTGGA	NA	False	NA	NA	False	AATAAA	-44	NA	122325315	122341502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_122325359_122337546_122337649_122341438
WTC11_00066707	chr3	+	4524	7	NNC	ENSG00000121542.12	novel	4228	6	NA	NA	-2387	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	28.1464424434461	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGTTTTCTTTCATT	123204762	False	NA	12	True	TATAAA	-12	NA	123205934	123274130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_123207108_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
WTC11_00066708	chr3	+	790	1	FSM	ENSG00000273454.1	ENST00000609005.1	552	1	-247	9	-247	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGTGATTTGGGTGTT	NA	False	NA	NA	False	AATAAA	-5	NA	123277105	123277895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123277100_123277900
WTC11_00066709	chr3	+	723	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	46	0	-32	multi-exon	FALSE	canonical	2	2	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACTTTATAAGGTAA	123585232	True	NA	NA	False	NA	NA	NA	123585555	123630784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123585802_123629493_123629682_123630495
WTC11_00066710	chr3	+	280	1	FSM	ENSG00000229048.5	ENST00000493631.1	470	1	27	163	27	-163	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTGCTGTACTGTTTA	NA	False	NA	NA	False	AAAACA	-32	NA	125310907	125311187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_125310900_125311200
WTC11_00066711	chr3	+	453	1	FSM	ENSG00000241439.1	ENST00000466506.1	262	1	-217	26	-217	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCCGCTGCAGTCCTCC	125958294	False	NA	NA	False	NA	NA	NA	125958338	125958791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_125958300_125958800
WTC11_00066712	chr3	+	459	2	FSM	ENSG00000073111.14	ENST00000472731.1	547	2	88	0	88	0	multi-exon	FALSE	canonical	3	789	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCGGGCCATGCGGCAG	127581830	False	NA	NA	False	NA	NA	NA	127599189	127604708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127599548_127604607
WTC11_00066714	chr3	+	598	6	FSM	ENSG00000114626.18	ENST00000483857.5	1027	6	-16	445	-16	146	multi-exon	FALSE	canonical	3	10	junction_2	13.42236938845	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCCCCTGGGTCCAGGG	127672485	True	NA	NA	False	NA	NA	NA	127672918	127676581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535
WTC11_00066716	chr3	+	2045	11	FSM	ENSG00000114626.18	ENST00000468137.5	2065	11	20	0	20	0	multi-exon	FALSE	canonical	3	10	junction_1	9.59426912276282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGAGCATGAGCCTGTG	127674113	False	NA	4	True	AATAAA	-13	NA	127674129	127680913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
WTC11_00066717	chr3	+	1881	5	FSM	ENSG00000132394.11	ENST00000483457.1	1859	5	-22	0	-2	0	multi-exon	FALSE	canonical	1	4	junction_4	87.4113836980058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGGTGTCTCTCTCTC	128151570	True	NA	15	True	AATAAA	-22	NA	128153478	128408642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128408068
WTC11_00066719	chr3	+	2588	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.9040552641052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	128875777	True	NA	15	True	TATAAA	-12	NA	128879622	128913102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
WTC11_00066720	chr3	+	1872	16	FSM	ENSG00000177646.20	ENST00000508971.1	1872	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	104.389314055074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGCCAACTGCCATCA	128899354	False	NA	-6	True	AATAAA	-10	NA	128899364	128916067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506_128912706_128912802_128912937_128914629_128914799_128915365_128915536_128915921
WTC11_00066722	chr3	+	1711	3	ISM	ENSG00000206417.8	ENST00000502789.2	922	5	-1315	994	-1185	-972	5prime_fragment	FALSE	canonical	1	2	junction_2	15	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCAGGCCGGGAGGCCTT	129316908	False	NA	NA	False	NA	NA	NA	129316920	129323575	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_129318311_129318542_129318638_129323349
WTC11_00066723	chr3	+	4060	1	NIC	ENSG00000244932.2	novel	517	5	NA	NA	5575	-3217	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATCACCAGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	129386872	129390932	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_129386900_129390900
WTC11_00066724	chr3	+	3842	29	FSM	ENSG00000163913.14	ENST00000689332.1	3952	29	-9	119	0	0	multi-exon	FALSE	canonical	3	24	junction_21	22.3669535754179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	NA	False	NA	16	True	AATAAA	-16	NA	129440124	129520349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00066725	chr3	+	4638	26	ISM	ENSG00000163913.14	ENST00000692508.1	4618	29	16808	162	-526	1	3prime_fragment	FALSE	canonical	3	51	junction_2	19.9043311869553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTCTTGCCCAGA	NA	False	NA	15	True	AATAAA	-15	NA	129457399	129520348	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
WTC11_00066727	chr3	+	579	2	FSM	ENSG00000249846.7	ENST00000507856.1	569	2	-10	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGCTCCAGATGGACT	130112371	True	NA	NA	False	ATTAAA	-6	NA	130112539	130119430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130112745_130119056
WTC11_00066728	chr3	+	816	6	FSM	ENSG00000114670.14	ENST00000506695.5	2189	6	1051	322	201	-322	multi-exon	FALSE	canonical	1	2	junction_4	2.1540659228538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGCTAGTGGGCTA	131027697	False	NA	NA	False	NA	NA	NA	131027929	131133956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131028003_131029612_131029879_131080422_131080589_131109802_131109922_131132744_131132810_131133829
WTC11_00066729	chr3	+	627	5	FSM	ENSG00000114670.14	ENST00000602792.1	659	5	0	32	0	-32	multi-exon	FALSE	canonical	1	2	junction_2	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGAAATAAACATGTTG	NA	False	NA	NA	False	ACTAAA	-16	NA	131080422	131152537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131080589_131109802_131109922_131132744_131132810_131133829_131133957_131152387
WTC11_00066730	chr3	+	2490	3	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	7	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATTGACTCACAG	NA	False	NA	NA	False	AATAAA	-35	NA	132376876	132392739	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_132377007_132377147_132377363_132390594
WTC11_00066732	chr3	+	830	5	NIC	ENSG00000144868.14	novel	2165	6	NA	NA	-78	-14	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	59.4994747875979	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTGCATTGATTGCTTC	133036633	True	NA	NA	False	AATAAA	-17	NA	133038312	133396214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_133038436_133045901_133046021_133229269_133229352_133390179_133390335_133395863
WTC11_00066733	chr3	+	344	3	FSM	ENSG00000144867.13	ENST00000484684.1	512	3	168	0	-32	0	multi-exon	FALSE	canonical	3	309	junction_1	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTCCATTACTGACAGCT	133799173	True	NA	NA	False	NA	NA	NA	133805782	133807774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133806003_133806608_133806704_133807745
WTC11_00066734	chr3	+	5162	12	FSM	ENSG00000182923.20	ENST00000682822.1	5149	12	-13	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	56.3895834704154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485268	True	NA	NA	False	ATTAAA	-8	NA	134486036	134565022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
WTC11_00066735	chr3	+	5781	15	FSM	ENSG00000182923.20	ENST00000675561.1	5779	15	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	72.7742175134427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485286	True	NA	NA	False	ATTAAA	-17	NA	134486054	134565031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
WTC11_00066737	chr3	+	1987	13	NIC	ENSG00000182923.20	novel	7529	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	69.1041886493785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	134486160	False	NA	5	True	AATAAA	-19	NA	134486216	134575013	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_134486557_134488018_134488091_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
WTC11_00066739	chr3	+	447	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCCGCGCCGACCTGG	135965776	True	NA	NA	False	NA	NA	NA	135966036	135966483	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_135966000_135966500
WTC11_00066741	chr3	+	2836	12	ISM	ENSG00000114098.18	ENST00000491704.5	2777	22	254	49508	3	-1	5prime_fragment	FALSE	canonical	3	38	junction_2	118.963220929346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTTGTGTGGTAAA	138183935	False	NA	NA	False	AATAAA	-23	NA	138187554	138246886	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
WTC11_00066743	chr3	+	1419	9	FSM	ENSG00000175110.14	ENST00000498505.5	1401	9	-18	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	258.645721741149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTTAAAAAGTCTGGTGT	139338011	True	NA	118	True	NA	NA	NA	139344003	139357223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139344199_139346880_139347045_139348159_139348325_139349327_139349435_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
WTC11_00066745	chr3	+	227	1	FSM	ENSG00000283418.1	ENST00000637379.1	88	1	-218	79	-218	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGCAGCACATAGAGAGGA	NA	False	NA	NA	False	AAGAAA	-21	NA	139388058	139388285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139388100_139388300
WTC11_00066746	chr3	+	5830	9	FSM	ENSG00000114120.14	ENST00000648615.1	5809	9	-21	0	-10	0	multi-exon	FALSE	canonical	3	10	junction_5	111.385591527809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAAATACAGAGGAATAT	140935174	True	NA	-20	True	NA	NA	NA	140941819	140980961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966933_140967037_140968682_140968731_140970926_140970994_140973715_140974006_140976259
WTC11_00066747	chr3	+	7411	6	FSM	ENSG00000177311.12	ENST00000321464.7	8014	6	-14	617	0	-617	multi-exon	FALSE	canonical	2	5	junction_3	8.30903123113639	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTTTTTGTTCCTTCTC	141368453	False	NA	NA	False	NA	NA	NA	141368489	141449175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141368805_141369871_141369947_141381424_141381488_141386871_141386938_141403926_141404032_141442388
WTC11_00066749	chr3	+	879	9	FSM	ENSG00000155903.14	ENST00000509118.5	879	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.4640660227179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAGCAAATAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	141578712	141609974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141578755_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876
WTC11_00066750	chr3	+	877	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	-15	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	954.695064754535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	141725492	True	NA	16	True	ATTAAA	-28	NA	141738303	141745517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
WTC11_00066753	chr3	+	231	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTGAGTCTCCCACA	148417900	True	NA	NA	False	NA	NA	NA	148417919	148418150	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148417900_148418200
WTC11_00066755	chr3	+	904	6	FSM	ENSG00000198843.14	ENST00000485923.1	1078	6	174	0	174	0	multi-exon	FALSE	canonical	2	5	junction_1	334.527726803026	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAGGTAAACATTAC	150591484	False	NA	NA	False	NA	NA	NA	150603509	150627905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150603687_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
WTC11_00066757	chr3	+	7860	23	NIC	ENSG00000144893.13	novel	10744	43	NA	NA	-29692	92	intron_retention	FALSE	canonical	2	3	junction_18	4.23508564414265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATATTTGGCTTAGGG	NA	False	NA	NA	False	NA	NA	NA	151364974	151437164	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_151365207_151365849_151365992_151367645_151367767_151368149_151368252_151369435_151369550_151372566_151372767_151376025_151376215_151376799_151376875_151376990_151377179_151378011_151378174_151380112_151380225_151382655_151382746_151383778_151383889_151384082_151384219_151385029_151385192_151387809_151388173_151389978_151390136_151394655_151394868_151411277_151411508_151413138_151413296_151416311_151416423_151430298_151430381_151432751
WTC11_00066758	chr3	+	6321	11	FSM	ENSG00000152601.18	ENST00000282488.11	6458	11	137	0	137	0	multi-exon	FALSE	canonical	2	5	junction_8	10.0204790304656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCGTGTATCTGAGATT	NA	False	NA	25	True	AATAAA	-37	NA	152268176	152465779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_152269093_152299404_152300368_152414940_152415112_152432716_152432921_152445281_152445540_152446703_152446758_152447619_152447774_152455541_152455578_152456266_152456362_152459270_152459346_152462384
WTC11_00066760	chr3	+	1202	5	FSM	ENSG00000174899.13	ENST00000651325.1	1201	5	75	-76	9	76	multi-exon	FALSE	canonical	2	3	junction_4	7.59522876548166	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGAAAATTGGCAATA	157543080	True	NA	NA	False	AATAAA	-26	NA	157543320	157578961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157571954_157572044_157578278
WTC11_00066761	chr3	+	2701	9	FSM	ENSG00000174891.14	ENST00000683137.1	2746	9	45	0	45	0	multi-exon	FALSE	canonical	2	4	junction_1	23.2150274606773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	158110367	True	NA	NA	False	NA	NA	NA	158110431	158545101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
WTC11_00066762	chr3	+	1940	6	FSM	ENSG00000178053.20	ENST00000650753.1	1937	6	-3	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	199.188955517117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATACTTCTCTAATTT	158566969	True	NA	-94	True	AGTAAA	-13	NA	158571190	158606358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158605096
WTC11_00066763	chr3	+	3021	18	NNC	ENSG00000168827.15	novel	6478	18	NA	NA	9	239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	129.667341212669	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTATATATGTCT	158637301	True	NA	16	True	ATTAAA	-17	NA	158644536	158692138	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658925_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
WTC11_00066765	chr3	+	4372	20	NIC	ENSG00000113810.16	novel	5116	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	124.414796351746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	160394146	True	NA	14	True	AATAAA	-17	NA	160399649	160434953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_160399698_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
WTC11_00066766	chr3	+	1645	1	FSM	ENSG00000198987.1	ENST00000362117.1	81	1	74	-1638	74	1638	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAAATGTGATTTT	160404777	False	NA	NA	False	TTTAAA	-11	NA	160404818	160406463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160404800_160406500
WTC11_00066767	chr3	+	1017	1	FSM	ENSG00000244009.1	ENST00000471720.1	806	1	-68	-143	-68	143	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCTGCTGCTTCATCTC	160452511	False	NA	NA	False	NA	NA	NA	160452529	160453546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160452500_160453500
WTC11_00066768	chr3	+	1803	2	NNC	ENSG00000229320.3	novel	998	3	NA	NA	247	272	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGTTCCTTCTATTTA	160565681	False	NA	NA	False	NA	NA	NA	160565693	160569520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_160566154_160568177
WTC11_00066769	chr3	+	583	6	FSM	ENSG00000169251.13	ENST00000473909.5	600	6	12	5	-8	-5	multi-exon	FALSE	canonical	3	22	junction_1	157.410800137729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAATTATAACTTTT	161215990	True	NA	NA	False	NA	NA	NA	161221299	161234900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
WTC11_00066773	chr3	+	4640	9	NNC	ENSG00000008952.17	novel	1430	9	NA	NA	0	47075	intron_retention	FALSE	non_canonical	0	0	junction_8	454.034690304607	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGCCAGGGGTGGTGG	169952892	True	NA	NA	False	AATACA	-40	NA	169966813	170045448	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593_169996463_170045416
WTC11_00066775	chr3	+	834	3	FSM	ENSG00000173890.17	ENST00000482813.5	865	3	0	31	0	-31	multi-exon	FALSE	canonical	3	6	junction_2	178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTTAAACAGATGGCTT	170033787	True	NA	NA	False	AATGAA	-43	NA	170038198	170063120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170038216_170038914_170039044_170062432
WTC11_00066776	chr3	+	226	1	FSM	ENSG00000199536.1	ENST00000362666.1	107	1	-126	7	-126	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTAATAGGGGATTT	NA	False	NA	NA	False	NA	NA	NA	170149718	170149944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170149700_170149900
WTC11_00066780	chr3	+	4416	26	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_25	116.390405102826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATTTTATGTCTCATG	172736385	True	NA	12	True	AATAAA	-14	NA	172750706	172821468	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172818547_172818815_172820147
WTC11_00066781	chr3	+	288	4	FSM	ENSG00000177694.16	ENST00000489729.5	284	4	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCTAATTATTTTAA	174440820	True	NA	NA	False	NA	NA	NA	174440982	174737746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_174441033_174536620_174536684_174550568_174550638_174737640
WTC11_00066782	chr3	+	578	4	FSM	ENSG00000177694.16	ENST00000434257.1	574	4	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTATTTATTTTTGG	174440820	True	NA	NA	False	NA	NA	NA	174440982	175097142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_174441033_174550568_174550638_174737640_174737747_175096789
WTC11_00066783	chr3	+	233	2	Antisense	novelGene_ENSG00000288895.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	307	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTCATCACTTAAGGC	NA	False	NA	NA	False	NA	NA	NA	176321651	176327178	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_176321828_176327121
WTC11_00066785	chr3	+	6240	17	FSM	ENSG00000171109.19	ENST00000263969.9	2754	17	37	-3523	37	1083	multi-exon	FALSE	canonical	3	80	junction_2	10.298475311909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGGGCAAGAGAGTAA	179347438	False	NA	NA	False	AGTAAA	-23	NA	179348797	179396019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
WTC11_00066797	chr3	+	1028	3	NNC	ENSG00000114796.16	novel	574	4	NA	NA	0	1077	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	7	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTAGCCATAGTGTGT	183632162	True	NA	19	True	AATAAA	-16	NA	183635634	183637527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_183635748_183636220_183636312_183636703
WTC11_00066798	chr3	+	7273	8	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	29.912798434852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	183632162	True	NA	9	True	ATTAAA	-17	NA	183635634	183684519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635748_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
WTC11_00066800	chr3	+	3653	22	NIC	ENSG00000163872.16	novel	6526	31	NA	NA	35	4	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	39.7328379643138	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGTTTTCTGAT	183692897	True	NA	NA	False	AATAAA	-22	NA	183697831	183793490	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
WTC11_00066801	chr3	+	6448	31	NNC	ENSG00000163872.16	novel	5737	5	NA	NA	295	-2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	40.1491663120862	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGTGTTTCTGAGTT	183697957	False	NA	26	True	AATAAA	-14	NA	183698091	183812621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_183698211_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754122_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183797922_183798052_183798890_183798990_183800465_183800569_183801454_183801529_183803255_183803336_183803986_183804189_183806865_183807093_183808029_183808105_183809096_183809171_183810474
WTC11_00066808	chr3	+	2860	20	FSM	ENSG00000161204.12	ENST00000473311.5	2844	20	-16	0	0	0	multi-exon	TRUE	canonical	1	5	junction_6	134.544970290498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTCTGCTGCTCCCT	184179695	True	NA	25	True	ATTAAA	-22	NA	184186159	184194012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506_184186876_184187396_184187762_184187860_184187984_184188140_184188408_184188663_184188671_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
WTC11_00066811	chr3	+	5246	31	ISM	ENSG00000114867.22	ENST00000342981.8	5667	32	597	41	0	0	3prime_fragment	FALSE	canonical	3	633	junction_12	389.788702019725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTGCCTGTAATTATTAA	184315606	True	NA	-17	True	NA	NA	NA	184315762	184335317	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
WTC11_00066837	chr3	-	579	3	FSM	ENSG00000254485.5	ENST00000517846.1	608	3	0	29	0	-29	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAATAAATGTA	-9362726	True	NA	NA	False	NA	NA	NA	9363006	9349713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9350067_9355800_9355860_9362839
WTC11_00066838	chr3	-	1818	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	-9	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395092	True	NA	-30	True	TATAAA	-37	NA	9397495	9388873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391704_9391827_9397423
WTC11_00066840	chr3	-	676	3	NIC	ENSG00000206573.10	novel	2098	3	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9395519	False	NA	-3	True	AATAAA	-15	NA	9395575	9390013	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9390498_9391704_9391827_9395505
WTC11_00066843	chr3	-	867	4	FSM	ENSG00000156990.14	ENST00000423108.5	756	4	-64	-47	-64	47	multi-exon	FALSE	canonical	3	46	junction_1	296.278022584644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	-9833301	False	NA	-6	True	AGTAAA	-14	NA	9840681	9837801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531
WTC11_00066844	chr3	-	418	1	FSM	ENSG00000232901.1	ENST00000417973.1	294	1	-143	19	-143	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTAAAAAAGCTACTAAT	-10001063	False	NA	NA	False	NA	NA	NA	10001083	10000665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10000700_10001100
WTC11_00066845	chr3	-	942	3	FSM	ENSG00000186162.11	ENST00000335507.10	1833	3	6	885	6	-885	multi-exon	FALSE	canonical	1	2	junction_1	17.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTTCTTTGAGACA	-10025595	True	NA	NA	False	NA	NA	NA	10026360	10015122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10015527_10023529_10023748_10026040
WTC11_00066846	chr3	-	636	4	FSM	ENSG00000157017.16	ENST00000481287.5	656	4	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTTCCAAATGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	10290337	10285749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10285895_10286703_10286813_10289761_10289879_10290072
WTC11_00066847	chr3	-	1092	4	FSM	ENSG00000225526.6	ENST00000564146.4	1124	4	0	32	0	11	multi-exon	FALSE	canonical	1	1	junction_3	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTCAAAAAAATAAAAAAT	-12545477	True	NA	NA	False	NA	NA	NA	12545499	12539807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12540434_12541859_12542023_12543179_12543230_12545246
WTC11_00066850	chr3	-	7506	14	FSM	ENSG00000144711.16	ENST00000613206.2	7700	14	17	177	17	0	multi-exon	FALSE	canonical	0	0	junction_13	34.1120673090136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCTCACTTTTTCTGA	-13073352	True	NA	-4	True	AATAAA	-15	NA	13073412	12897219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12901523_12902772_12902823_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_13072991
WTC11_00066851	chr3	-	4873	1	NIC	ENSG00000144711.16	novel	7700	14	NA	NA	65367	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTCTCACTTTTTCTG	-12902080	False	NA	-5	True	AATAAA	-14	NA	12902093	12897220	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_12897200_12902100
WTC11_00066854	chr3	-	6660	25	NNC	ENSG00000144596.13	novel	7977	25	NA	NA	-46954	143	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_21	13.3369135818183	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATGAATCAGACAGATT	-14602206	True	NA	NA	False	AAAAAG	-34	NA	14603029	14491026	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14493827_14494842_14494990_14496416_14496561_14503565_14503672_14505614_14505790_14506800_14506981_14507560_14507701_14509819_14509965_14511164_14511311_14511412_14511480_14511585_14512439_14512776_14512858_14513664_14513811_14514291_14514479_14517063_14517214_14517771_14517898_14520109_14520280_14520389_14520538_14521641_14521788_14522999_14523076_14523611_14523699_14524417_14524539_14525436_14525573_14525850_14525932_14602927
WTC11_00066855	chr3	-	2374	8	NNC	ENSG00000206562.12	novel	2618	6	NA	NA	0	35144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.0021783727906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGCAGCTTTTGCTAT	-15424931	True	NA	NA	False	NA	NA	NA	15427532	15346130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_15346156_15410102_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
WTC11_00066857	chr3	-	1382	11	FSM	ENSG00000206561.14	ENST00000604401.2	1771	11	389	0	389	0	multi-exon	FALSE	canonical	1	1	junction_4	3.19374388453426	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCGACTGGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	15477197	15451096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15451714_15453828_15453932_15455898_15456020_15456459_15456580_15466340_15466438_15470535_15470617_15473999_15474036_15474227_15474273_15474924_15474952_15475424_15475488_15477125
WTC11_00066858	chr3	-	420	4	FSM	ENSG00000206560.12	ENST00000462657.1	581	4	0	161	0	-161	multi-exon	FALSE	canonical	3	190	junction_3	11.1455023315337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTATTTATAACTTCT	NA	False	NA	NA	False	NA	NA	NA	15696231	15690000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15690221_15694738_15694814_15695187_15695215_15696133
WTC11_00066859	chr3	-	4486	13	Fusion	ENSG00000092345.14_ENSG00000229271.2	novel	3104	11	NA	NA	-349	3	multi-exon	FALSE	canonical	2	3	junction_11	7.84352174302675	164	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGCATTCTGATGTAA	-16697529	True	NA	0	True	AATAAA	-26	NA	16697868	16586788	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_16588714_16592049_16592149_16593654_16593769_16594532_16594584_16595313_16595386_16596749_16596890_16596987_16597052_16597489_16597542_16598086_16598179_16598451_16598599_16637884_16638086_16647573_16648613_16697378
WTC11_00066860	chr3	-	1168	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27153	259	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGAACTTTAGGGAAGG	-16670012	True	NA	NA	False	NA	NA	NA	16670326	16647493	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_16648613_16670277
WTC11_00066863	chr3	-	241	1	FSM	ENSG00000233133.1	ENST00000458010.1	176	1	8	-73	8	73	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTAAAGAAATGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	17706225	17705984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17706000_17706200
WTC11_00066864	chr3	-	5376	1	FSM	ENSG00000214286.2	ENST00000417487.1	715	1	-704	-3957	-704	3957	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCCCATTTTGTTGATC	NA	False	NA	NA	False	AATGAA	-37	NA	17878873	17873497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17873500_17878900
WTC11_00066865	chr3	-	4256	1	FSM	ENSG00000182568.17	ENST00000606296.1	4200	1	889	-945	-664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTAGGGTTTGTCTGC	NA	False	NA	-6	True	ATTAAA	-18	NA	18352195	18347939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_18347900_18352200
WTC11_00066866	chr3	-	416	3	FSM	ENSG00000163576.18	ENST00000467602.5	456	3	0	40	0	-40	multi-exon	FALSE	canonical	0	0	junction_1	2.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTTATTTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	19898824	19884401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_19884616_19896686_19896842_19898777
WTC11_00066868	chr3	-	568	5	FSM	ENSG00000151090.20	ENST00000431815.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.67890834580027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTATCACTACCGCTGT	-24494414	True	NA	NA	False	NA	NA	NA	24494797	24152430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_24152491_24190073_24190335_24228937_24229002_24337299_24337372_24494686
WTC11_00066869	chr3	-	345	2	FSM	ENSG00000077097.16	ENST00000470132.1	451	2	106	0	106	0	multi-exon	FALSE	canonical	3	746	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATGGTGGCAAAGAT	-25624884	False	NA	NA	False	NA	NA	NA	25624932	25624351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25624446_25624681
WTC11_00066870	chr3	-	2288	3	FSM	ENSG00000151092.18	ENST00000489271.5	2288	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-25730531	False	NA	-1	True	AATAAA	-19	NA	25730550	25718943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132
WTC11_00066872	chr3	-	536	1	FSM	ENSG00000224237.1	ENST00000457048.1	203	1	-68	-265	-68	265	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAGTAAAAGCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	27215086	27214550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27214600_27215100
WTC11_00066873	chr3	-	7562	24	NIC	ENSG00000033867.17	novel	8079	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	48.7687339797606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGGCTATTGTCTTTA	-27474093	True	NA	-9	True	AATAAA	-15	NA	27484347	27372722	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_27376846_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484066
WTC11_00066875	chr3	-	809	3	NNC	ENSG00000235493.2	novel	781	3	NA	NA	-614	-37471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAACAATTGAACTGGAG	NA	False	NA	NA	False	NA	NA	NA	28059882	28035014	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_28035061_28051650_28051773_28059241
WTC11_00066878	chr3	-	1283	5	NIC	ENSG00000144645.15	novel	758	5	NA	NA	-316	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	90.7644616576334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATATGTGGAGGGAGATG	-31981593	False	NA	-5	True	AATAAA	-14	NA	31981621	31822131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_31822244_31830039_31830232_31876432_31876513_31879654_31879831_31980898
WTC11_00066879	chr3	-	1700	14	NNC	ENSG00000144635.9	novel	2485	13	NA	NA	0	9439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.514878914735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGCTCTTTTTCTGTT	-32562911	True	NA	NA	False	NA	NA	NA	32570825	32516534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32516566_32526756_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
WTC11_00066881	chr3	-	6130	16	NIC	ENSG00000153560.12	novel	4175	16	NA	NA	-11359	53	combination_of_known_junctions	TRUE	canonical	3	32	junction_4	95.2804048876555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGAGTTTCCCTGTGT	NA	False	NA	52	True	TTTAAA	-37	NA	33428179	33388282	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33396744_33396879_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589
WTC11_00066882	chr3	-	7340	2	FSM	ENSG00000153560.12	ENST00000492136.1	7394	2	56	-2	56	0	multi-exon	FALSE	canonical	3	348	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	NA	False	NA	-1	True	AATAAA	-23	NA	33398382	33388335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33393455_33396161
WTC11_00066883	chr3	-	4321	16	NNC	ENSG00000153560.12	novel	4175	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_5	93.581954575774	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33440195	True	NA	-1	True	AATAAA	-23	NA	33440587	33388335	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33396444_33396517_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
WTC11_00066886	chr3	-	7728	9	ISM	ENSG00000163539.18	ENST00000635664.1	4176	35	96682	-2307	-3665	39	3prime_fragment	FALSE	canonical	3	191	junction_1	15.8587515271537	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACATTTTCAAGTAAC	NA	False	NA	39	True	AATATA	-2	NA	33548776	33496205	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697
WTC11_00066888	chr3	-	2728	24	NIC	ENSG00000163539.18	novel	6978	39	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_16	35.5398548877768	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTATGTTTTAGTATTT	-33713926	False	NA	NA	False	NA	NA	NA	33718010	33570730	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632375_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
WTC11_00066889	chr3	-	2791	7	NIC	ENSG00000163539.18	novel	892	4	NA	NA	-17	1293	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	75.7693869580585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTGTTAAGTCTTT	-33714146	True	NA	NA	False	AATAAA	-15	NA	33718230	33681685	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33683605_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
WTC11_00066891	chr3	-	1546	1	FSM	ENSG00000230067.3	ENST00000388967.3	1683	1	114	23	114	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGGAGGGGGCATG	NA	False	NA	NA	False	NA	NA	NA	36768685	36767139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36767100_36768700
WTC11_00066892	chr3	-	10495	24	FSM	ENSG00000168016.15	ENST00000645898.2	10611	24	113	3	-80	-2	multi-exon	FALSE	canonical	2	3	junction_23	4.91169662185115	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGCTGCCGTTTTATT	-36944866	False	NA	-8	True	TATAAA	-16	NA	36944941	36826821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36828376_36829563_36829663_36830872_36833920_36834761_36834908_36838371_36838505_36838612_36838717_36842621_36842711_36846247_36846405_36847199_36847347_36851718_36851857_36852145_36852346_36855172_36858050_36858717_36858895_36860905_36861161_36864318_36864481_36874125_36874297_36889828_36889961_36892201_36892341_36892900_36892985_36895639_36895759_36899108_36899260_36903148_36903276_36908322_36908455_36944786
WTC11_00066893	chr3	-	827	1	FSM	ENSG00000178567.8	ENST00000322716.8	8089	1	7975	-713	7112	713	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAGATTGTAATCTAA	-36983740	False	NA	NA	False	NA	NA	NA	36985156	36984329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36984300_36985200
WTC11_00066894	chr3	-	4719	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	33	-1767	33	0	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCTGTCTTTCAGTGA	-36991491	False	NA	NA	False	AATAAA	-17	NA	36992907	36985042	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_36987230_36990375
WTC11_00066895	chr3	-	2919	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	-228	998	-37	-998	5prime_fragment	FALSE	canonical	3	11	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTCTGCCTTAGACTG	-36991752	True	NA	58	True	NA	NA	NA	36993168	36987807	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_36990436_36992877
WTC11_00066896	chr3	-	2672	14	NIC	ENSG00000093167.18	novel	2522	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	37.7106705662497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-37173351	True	NA	0	True	ATTAAA	-23	NA	37176317	37053003	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
WTC11_00066897	chr3	-	531	5	FSM	ENSG00000235257.10	ENST00000445429.5	532	5	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_2	1.58113883008419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATCCACTATTGGCAA	-37861513	True	NA	NA	False	AATAAA	-29	NA	37861728	37806078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37806229_37808703_37808881_37821013_37821101_37834678_37834768_37861700
WTC11_00066899	chr3	-	2967	9	NNC	ENSG00000114745.14	novel	3046	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	56.9340352952432	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-39105209	True	NA	0	True	AATACA	-25	NA	39107626	39096598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_39098490_39098740_39098816_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
WTC11_00066902	chr3	-	2023	19	NIC	ENSG00000168038.11	novel	4294	37	NA	NA	0	2	combination_of_known_splicesites	TRUE	canonical	2	12	junction_2	7.13018275872642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAGCATCTTTTGG	-41960051	True	NA	NA	False	NA	NA	NA	41962055	41800130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_41800294_41819422_41819507_41835863_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
WTC11_00066903	chr3	-	260	1	FSM	ENSG00000223513.1	ENST00000441771.1	245	1	232	-247	232	247	mono-exon	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACTCTTCTGAGATAG	NA	False	NA	NA	False	NA	NA	NA	41859362	41859102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_41859100_41859400
WTC11_00066905	chr3	-	1691	8	NIC	ENSG00000093183.14	novel	1446	8	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_6	71.8126815018754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579794	True	NA	-22	True	AATAAA	-18	NA	42581893	42547968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
WTC11_00066909	chr3	-	1661	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	33	3078	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_3	7.58653778449403	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGATTTTATTTTTTT	-44506590	True	NA	-7	True	AATAAA	-16	NA	44510603	44491768	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
WTC11_00066910	chr3	-	1777	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	6	3078	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	10.4253297309965	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGATTTTATTTTTTT	-44506617	True	NA	-7	True	AATAAA	-16	NA	44510630	44491768	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_44492508_44499893_44500635_44502541_44502669_44502964_44503057_44510552
WTC11_00066911	chr3	-	1089	1	FSM	ENSG00000214820.3	ENST00000452433.1	1089	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCGAAGAGCCAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	44581026	44579937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44579900_44581000
WTC11_00066912	chr3	-	426	3	FSM	ENSG00000163817.16	ENST00000493980.1	437	3	29	-18	29	18	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGCGTAAGCCCACT	NA	False	NA	NA	False	NA	NA	NA	45765741	45759961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45760023_45762912_45763073_45765536
WTC11_00066913	chr3	-	3398	11	NNC	ENSG00000163818.19	novel	4026	10	NA	NA	4	23332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9527427108946	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGTAAAAGTGTTTAC	-45840770	True	NA	NA	False	AAAACA	-31	NA	45842141	45799983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_45800009_45823990_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
WTC11_00066914	chr3	-	1655	1	FSM	ENSG00000260236.1	ENST00000568593.1	1911	1	218	38	218	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGATGCATGAATAAAGA	-47380555	False	226	NA	False	NA	NA	NA	47380781	47379126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47379100_47380800
WTC11_00066918	chr3	-	284	2	FSM	ENSG00000047849.22	ENST00000477765.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACACCATTGCCGTTTTC	-47857439	True	NA	NA	False	NA	NA	NA	47857478	47855124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47855361_47857430
WTC11_00066920	chr3	-	500	1	FSM	ENSG00000236768.1	ENST00000444020.1	547	1	47	0	47	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAATTCAGCATTA	NA	False	NA	NA	False	AAAAAG	-40	NA	48121168	48120668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48120700_48121200
WTC11_00066921	chr3	-	3633	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	7	-32	combination_of_known_junctions	FALSE	canonical	3	98	junction_11	72.5912758761914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGCCTAGTTCTTGA	-48183141	True	NA	-2	True	AATAAA	-16	NA	48188395	48157177	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
WTC11_00066922	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
WTC11_00066923	chr3	-	7719	39	NNC	ENSG00000164050.13	novel	7308	38	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_28	93.4693463016669	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	-48429789	False	NA	-9	True	ATTAAA	-14	NA	48429799	48403855	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406567_48406741_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419674_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
WTC11_00066924	chr3	-	7234	39	NNC	ENSG00000164050.13	novel	7308	38	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_29	93.1162001549781	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	-48429789	False	NA	-9	True	ATTAAA	-14	NA	48429799	48403855	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406567_48406741_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48419675_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
WTC11_00066926	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	111.667164177996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	-48435148	True	NA	-27	True	ATTAAA	-4	NA	48440100	48432194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
WTC11_00066928	chr3	-	3703	16	NIC	ENSG00000114268.12	novel	1757	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	35.7599403429778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-48554934	True	NA	-18	True	AATAAA	-18	NA	48556803	48517683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48536744_48536821_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863_48549961_48550117_48550235_48556680
WTC11_00066930	chr3	-	1630	14	NNC	ENSG00000010256.11	novel	1595	13	NA	NA	0	47485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	930.022618545333	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGGTGATGGCTCAC	-48589158	True	NA	NA	False	AAAAAG	-3	NA	48609646	48551516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48551552_48599001_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
WTC11_00066936	chr3	-	3057	13	NNC	ENSG00000213672.8	novel	2977	13	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_8	75.2634262662373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-48680460	True	NA	-5	True	AATAAA	-18	NA	48685883	48673843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681203_48681781_48682044_48682157_48682347_48682553_48682902_48683042_48685636
WTC11_00066937	chr3	-	1282	4	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	136.465705907707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702814	True	NA	0	True	AATAAA	-21	NA	48717182	48693447	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48694693_48694825_48695089_48695422_48717156
WTC11_00066938	chr3	-	856	3	ISM	ENSG00000068745.15	ENST00000412795.5	750	5	1729	255	9	-85	internal_fragment	FALSE	canonical	3	5	junction_2	77	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATTACCTGGTTAC	-48715503	False	NA	-7	True	ATTAAA	-14	NA	48715520	48694429	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_48694825_48695089_48695419_48715388
WTC11_00066940	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	255.778373575423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985539	True	NA	14	True	NA	NA	NA	49029421	49024342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
WTC11_00066942	chr3	-	2410	24	FSM	ENSG00000172053.18	ENST00000636669.1	2410	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.441003915243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-49104382	False	NA	-4	True	AATAAA	-21	NA	49104420	49095932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097133_49097288_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
WTC11_00066946	chr3	-	2973	2	FSM	ENSG00000188315.8	ENST00000479673.1	3330	2	363	-6	363	0	multi-exon	FALSE	canonical	3	18	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCAGTTTCTTAGTT	-49274153	False	NA	1	True	AATAAA	-18	NA	49274171	49268595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49271446_49274048
WTC11_00066947	chr3	-	3748	21	NIC	ENSG00000114316.13	novel	4070	22	NA	NA	8	-65	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	68.5914717731002	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCGGCGTCACTGCGCTG	-49339029	False	NA	NA	False	NA	NA	NA	49340021	49277208	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
WTC11_00066948	chr3	-	3534	20	NIC	ENSG00000114316.13	novel	4070	22	NA	NA	0	-306	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	70.5118602624631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTGGTGTTACCCAG	-49337036	True	NA	-31	True	NA	NA	NA	49340053	49277449	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49278452_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
WTC11_00066950	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	-49358205	False	NA	-33	True	NA	NA	NA	49358325	49357200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49357748_49358164
WTC11_00066951	chr3	-	1637	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	4	0	1	multi-exon	FALSE	canonical	0	0	junction_1	1055.2485752445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTATCCTGTTGTTTG	-49349785	True	NA	-9	True	AATAAA	-16	NA	49411928	49359143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
WTC11_00066952	chr3	-	1295	7	NIC	ENSG00000067560.14	novel	1805	5	NA	NA	-87	-953	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1176.37910792208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGAAGTCATCTTGCTA	-49409318	False	NA	NA	False	NA	NA	NA	49413085	49360097	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819_49412119_49412403_49412603_49412983
WTC11_00066954	chr3	-	2229	6	FSM	ENSG00000145020.16	ENST00000635936.1	2223	6	0	-6	0	0	multi-exon	FALSE	canonical	2	12	junction_3	219.964178901929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	-49420616	False	NA	-19	True	ATTAAA	-6	NA	49422353	49416790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419709_49420343_49421491_49421573_49422103
WTC11_00066958	chr3	-	2404	2	FSM	ENSG00000226913.2	ENST00000665395.1	2842	2	310	128	310	-128	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGCTTTGCCTAT	-49553953	False	NA	NA	False	AAAACA	-41	NA	49553995	49549486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49551443_49553547
WTC11_00066959	chr3	-	741	5	FSM	ENSG00000173531.16	ENST00000448220.5	667	5	-74	0	-74	0	multi-exon	FALSE	canonical	1	2	junction_4	5.95818764390649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCTTCTTAGCCTTTG	-49685042	False	NA	-1	True	CATAAA	-26	NA	49685164	49683946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49684190_49684313_49684454_49684549_49684657_49684737_49684836_49685011
WTC11_00066961	chr3	-	4495	7	NNC	ENSG00000176095.12	novel	4471	6	NA	NA	0	30946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.3998094661786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGCACACTGGCTCAC	-49781562	True	NA	NA	False	NA	NA	NA	49786540	49693347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49693375_49724294_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
WTC11_00066962	chr3	-	295	3	FSM	ENSG00000187492.9	ENST00000343366.8	1188	3	31	862	31	-767	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCACATGTGGCAACCA	-49799789	False	NA	NA	False	NA	NA	NA	49799804	49799093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49799157_49799246_49799438_49799763
WTC11_00066963	chr3	-	498	2	FSM	ENSG00000182179.13	ENST00000489826.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGAAGCACCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	49810564	49809978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49810429_49810516
WTC11_00066964	chr3	-	854	7	FSM	ENSG00000164078.14	ENST00000434765.5	854	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.96741563579414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGAGTATTGCCCTGA	-49895639	False	NA	NA	False	NA	NA	NA	49895816	49889949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895446_49895549_49895714
WTC11_00066966	chr3	-	1950	3	FSM	ENSG00000164078.14	ENST00000493535.5	1626	3	-264	-60	0	60	multi-exon	FALSE	canonical	1	1	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTTGAGAGTCAAAAA	-49903696	True	NA	NA	False	NA	NA	NA	49903873	49897926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49898212_49898517_49898689_49902379
WTC11_00066967	chr3	-	1702	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	-6	0	5	multi-exon	FALSE	canonical	2	2	junction_3	15.3260852434302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTGTTGCTCCTGTT	-50298733	False	NA	2	True	CATAAA	-24	NA	50298831	50292825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
WTC11_00066968	chr3	-	1640	3	FSM	ENSG00000186792.17	ENST00000359051.7	1635	3	0	-5	0	5	multi-exon	FALSE	canonical	2	2	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTGTTGCTCCTGTT	-50298761	False	1097	2	True	CATAAA	-24	NA	50298859	50292825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50294708_50295620_50298820
WTC11_00066969	chr3	-	1376	11	NIC	ENSG00000114388.14	novel	1542	11	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	58.9821159335607	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCAGCCGTGGGAGAC	-50347980	False	2774	17	True	AATAAA	-38	NA	50350754	50347469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349829_50349930_50350023_50350574
WTC11_00066970	chr3	-	2033	9	FSM	ENSG00000114388.14	ENST00000487632.5	2015	9	0	-18	0	18	multi-exon	FALSE	canonical	3	16	junction_7	71.6675266421271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCAGCCGTGGGAGAC	-50347993	False	2774	17	True	AATAAA	-38	NA	50350767	50347469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50349011_50349385_50349491_50349664_50349834_50349930
WTC11_00066974	chr3	-	1538	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	115.946086169216	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934931	True	NA	-6	True	ATTAAA	-18	NA	51941884	51933428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941508_51941780
WTC11_00066975	chr3	-	2002	14	NIC	ENSG00000090097.22	novel	2015	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_12	56.4618528601601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51967412	False	NA	-10	True	AATAAA	-20	NA	51968387	51957453	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961271_51967325_51967435_51968343
WTC11_00066976	chr3	-	2086	14	NIC	ENSG00000090097.22	novel	2015	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	46.0821237594093	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51967428	False	975	-10	True	AATAAA	-20	NA	51968403	51957453	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325_51967435_51968309
WTC11_00066980	chr3	-	1143	10	NNC	ENSG00000164087.8	novel	1936	11	NA	NA	12	-37345	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.9102117537787	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGACTCGTCGTGGG	-52152531	True	NA	NA	False	AAGAAA	-19	NA	52154392	52112798	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52112941_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
WTC11_00066981	chr3	-	694	1	FSM	ENSG00000242797.3	ENST00000624537.1	697	1	6	-3	6	3	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCATACAATGTTTAGGA	NA	False	NA	NA	False	AATAAA	-25	NA	52289270	52288576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52288600_52289300
WTC11_00066982	chr3	-	2740	7	ISM	ENSG00000163930.10	ENST00000296288.9	3434	17	4419	-18	158	0	3prime_fragment	FALSE	canonical	3	269	junction_5	36.6821936821305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-52405475	False	NA	16	True	AATAAA	-26	NA	52405495	52401007	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109
WTC11_00066983	chr3	-	636	4	FSM	ENSG00000114854.8	ENST00000496590.1	727	4	91	0	91	0	multi-exon	FALSE	canonical	3	27	junction_1	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACGGCCGCATCGACTAT	-52452732	False	NA	NA	False	NA	NA	NA	52452743	52451414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52451528_52451743_52451859_52452105_52452253_52452482
WTC11_00066984	chr3	-	1732	4	FSM	ENSG00000168268.11	ENST00000479024.5	1714	4	0	-18	0	16	multi-exon	FALSE	canonical	3	224	junction_1	920.491173233073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCCTCGTCACTTGA	-52526400	False	NA	-5	True	AATAAA	-35	NA	52526491	52524368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524612_52524816_52524882_52524962_52525104_52525208
WTC11_00066987	chr3	-	7547	28	NNC	ENSG00000163939.18	novel	5145	30	NA	NA	0	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	56.9064160885563	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGCCAATTTAAGAGAA	-52674132	False	NA	87	True	NA	NA	NA	52679713	52545265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589258_52603523_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573
WTC11_00066988	chr3	-	8051	31	NIC	ENSG00000163939.18	novel	5145	30	NA	NA	0	86	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	52.9532393301444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGCCAATTTAAGAGAA	-52680336	True	NA	87	True	NA	NA	NA	52685917	52545265	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52558248_52558414_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
WTC11_00066989	chr3	-	1833	11	NIC	ENSG00000016864.19	novel	1826	11	NA	NA	13	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_10	101.503940810197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-52705289	False	NA	-10	True	AATAAA	-17	NA	52705641	52694488	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52703798_52703929_52705446
WTC11_00066992	chr3	-	1820	11	NIC	ENSG00000016864.19	novel	1826	11	NA	NA	0	61	combination_of_known_junctions	FALSE	canonical	3	81	junction_10	62.92185629811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAGATGTGTCAGCT	-52702682	True	NA	NA	False	NA	NA	NA	52705781	52694740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705446
WTC11_00066993	chr3	-	3641	16	NIC	ENSG00000114904.13	novel	6053	16	NA	NA	34	994	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	44.097870948859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCAGGTGTTTTTTTTT	-52769203	False	NA	-3	True	AATAAA	-16	NA	52770905	52710782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768567_52770653
WTC11_00066995	chr3	-	6333	12	NNC	ENSG00000248592.7	novel	1405	10	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_4	82.5115068358988	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGGATGCCCACGTGG	-52893071	True	NA	-33	True	NA	NA	NA	52897548	52833149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52833431_52833616_52833750_52834939_52835191_52835788_52837987_52838006_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
WTC11_00066996	chr3	-	959	1	FSM	ENSG00000279144.1	ENST00000624222.1	469	1	7	-497	7	497	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCTAGGATG	NA	False	NA	NA	False	AATGAA	-7	NA	52848546	52847587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52847600_52848500
WTC11_00067002	chr3	-	610	4	FSM	ENSG00000163931.17	ENST00000487660.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	4089	junction_2	244.889090542365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACTCACAATTTCAAAC	-53242005	True	NA	NA	False	NA	NA	NA	53242199	53234851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53235175_53240250_53240349_53241131_53241246_53242124
WTC11_00067003	chr3	-	2032	13	NIC	ENSG00000113812.14	novel	3579	13	NA	NA	12	-62	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	34.6052139616754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATAAACTGCTTTT	-53877212	True	NA	22	True	AGTAAA	-38	NA	53882140	53868563	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880073_53881978
WTC11_00067004	chr3	-	2797	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	1310	3443	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_1	2900.70517288469	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTGGTTTTTATTTTT	-54638449	False	NA	-10	True	ATTAAA	-20	NA	54638547	54628678	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632503_54633558_54633741_54634460_54634566_54637690
WTC11_00067005	chr3	-	1713	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-116	3442	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_2	3394.55383813543	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-11	True	ATTAAA	-19	NA	54639973	54628679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54631778_54633558_54633741_54634460_54634566_54637690_54637821_54639604
WTC11_00067006	chr3	-	921	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3044.87595076639	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
WTC11_00067008	chr3	-	6129	5	FSM	ENSG00000114251.15	ENST00000264634.9	5841	5	-313	25	-313	-25	multi-exon	FALSE	canonical	1	2	junction_4	3.89711431702997	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATCATTTTATGAA	-55487591	False	NA	-28	True	GATAAA	-35	NA	55487619	55465739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_55470551_55474336_55474630_55479313_55479565_55480784_55480919_55486979
WTC11_00067009	chr3	-	1284	5	FSM	ENSG00000114251.15	ENST00000497027.5	1299	5	15	0	15	0	multi-exon	FALSE	canonical	1	1	junction_4	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAGAATTGCAACCGGA	-55481350	False	29	NA	False	NA	NA	NA	55481378	55469992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_55470551_55474336_55474630_55479313_55479565_55480784_55480919_55481330
WTC11_00067012	chr3	-	1399	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6611	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	5.93717104351896	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAACTGCTTCTTTTCA	-58842332	True	NA	-4	True	AATAAA	-23	NA	58842615	58742003	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842146
WTC11_00067013	chr3	-	3098	16	NIC	ENSG00000163689.21	novel	3291	17	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	16.8166584076623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAACTGCTTCTTTTCA	-59049435	True	NA	-4	True	AATAAA	-23	NA	59049985	58742003	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
WTC11_00067014	chr3	-	1150	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-266	26156	0	68	5prime_fragment	FALSE	canonical	3	39	junction_1	11.2178429299041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	-59049475	True	NA	NA	False	AAAAAG	-13	NA	59050025	58913501	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
WTC11_00067015	chr3	-	683	4	NIC	ENSG00000189283.10	novel	1033	10	NA	NA	0	149	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.73488351136175	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTAAGTGGTTCATGA	NA	False	NA	NA	False	NA	NA	NA	60014150	59749160	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_59749569_59752220_59752322_60011370_60011401_60014006
WTC11_00067016	chr3	-	730	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	34013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGAGCCCAGTTCA	-61741834	False	NA	NA	False	AAAAAG	-2	NA	61743106	61708441	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61708473_61742407
WTC11_00067018	chr3	-	1415	3	FSM	ENSG00000163618.18	ENST00000474560.1	4371	3	2924	32	2924	-29	multi-exon	FALSE	canonical	3	8	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTCTCAATAAATATTC	NA	False	NA	NA	False	TATAAA	-30	NA	62438211	62398383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62399586_62403080_62403186_62438103
WTC11_00067019	chr3	-	4591	28	FSM	ENSG00000163618.18	ENST00000283269.13	4591	28	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	5.6132803532098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGATCTGCTTTGTGTTT	-62874921	False	NA	NA	False	AATAAA	-13	NA	62875241	62398971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62399586_62403080_62403186_62438103_62438212_62445764_62445798_62465366_62465451_62466338_62466414_62474172_62474321_62478260_62478417_62491338_62491481_62492289_62492447_62499161_62499269_62513637_62513707_62516058_62516183_62516579_62516644_62518148_62518251_62532870_62533059_62536444_62536582_62549902_62550116_62557404_62557514_62570871_62570939_62585184_62585325_62592636_62592749_62645721_62645844_62650846_62651081_62662313_62662395_62753440_62753774_62765870_62765985_62874588
WTC11_00067020	chr3	-	489	1	FSM	ENSG00000242841.1	ENST00000483942.1	1338	1	579	270	579	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGAGGGCAAGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	63097132	63096643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_63096600_63097100
WTC11_00067022	chr3	-	1727	2	FSM	ENSG00000163637.13	ENST00000640095.1	4151	2	1001	1423	1001	-1423	multi-exon	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTCTGTTCACCTTGA	NA	False	NA	NA	False	GGGGCT	-34	NA	64154035	64146829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64147703_64153181
WTC11_00067023	chr3	-	1562	2	FSM	ENSG00000163638.13	ENST00000477180.1	1811	2	251	-2	251	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGTGTTTCGCATAG	NA	False	NA	2	True	AATAAA	-18	NA	64522260	64515654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64517122_64522165
WTC11_00067024	chr3	-	228	3	FSM	ENSG00000163638.13	ENST00000467119.1	476	3	67	181	67	-181	multi-exon	FALSE	canonical	2	3	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCTACACCAACCCCT	NA	False	NA	NA	False	NA	NA	NA	64654612	64651082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64651164_64654352_64654459_64654571
WTC11_00067025	chr3	-	6896	21	NIC	ENSG00000151276.24	novel	7415	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_20	30.4530786620992	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTCTGGATTGATAT	-65622077	True	NA	-2	True	AATACA	-27	NA	65622088	65353524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971
WTC11_00067026	chr3	-	7771	23	NIC	ENSG00000151276.24	novel	7415	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_21	31.8992473809505	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTCTGGATTGATAT	-66034371	True	NA	-2	True	AATACA	-27	NA	66038834	65353524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971_65622089_66037995
WTC11_00067027	chr3	-	2923	6	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	56	832	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	15.551205741035	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGACTGTTCAGAGTTA	-68931903	True	NA	-3	True	AATAAA	-19	NA	68932491	68730933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
WTC11_00067028	chr3	-	4574	18	NIC	ENSG00000163378.14	novel	4443	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	23.4532591194017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAACCATTTTTAAGG	-69011554	True	NA	-29	True	AATAAA	-22	NA	69013668	68975224	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012367_69012800_69013573
WTC11_00067029	chr3	-	793	7	FSM	ENSG00000114861.24	ENST00000318779.7	843	7	0	50	0	-46	multi-exon	TRUE	canonical	0	0	junction_2	3.71558280160133	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGCCTAACCCTTCCC	-71583895	False	NA	-47	True	NA	NA	NA	71583939	71197931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71198069_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583909
WTC11_00067031	chr3	-	2595	7	ISM	ENSG00000163412.13	ENST00000389826.7	6083	8	495	3443	14	-7	3prime_fragment	FALSE	canonical	3	29	junction_6	85.1934074131718	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACGTTAATATTTCTA	NA	False	NA	-11	True	AATAAA	-12	NA	71728623	71682733	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71728475
WTC11_00067032	chr3	-	1283	3	FSM	ENSG00000241163.9	ENST00000668168.1	1426	3	133	10	121	-1	multi-exon	FALSE	canonical	2	6	junction_2	0.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTGATTTGGCCTTG	NA	False	NA	-20	True	AATAAA	-16	NA	72060109	72035762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72036521_72055860_72055963_72059686
WTC11_00067033	chr3	-	4614	5	NNC	ENSG00000163602.12	novel	7215	4	NA	NA	-516	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.09326673973661	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTTTGTGTGTATAG	-72447103	False	NA	-5	True	AATAAA	-24	NA	72447137	72374595	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495_72446622_72446967
WTC11_00067035	chr3	-	3273	8	NNC	ENSG00000227124.11	novel	1169	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	20.3178819400697	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782604	True	NA	-5	True	AATAAA	-30	NA	75785549	75729960	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_75730619_75732059_75732122_75737456_75739346_75741275_75741369_75741609_75741737_75783305_75783365_75784783_75785003_75785383
WTC11_00067036	chr3	-	565	3	NNC	ENSG00000227124.11	novel	1577	7	NA	NA	0	-18478	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAATGGTGAATCCTTT	-75782604	True	NA	-5	True	ATTAAA	-22	NA	75785549	75757769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_75758110_75783305_75783365_75785383
WTC11_00067039	chr3	-	284	1	FSM	ENSG00000240964.3	ENST00000473281.3	284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2015	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACACACACTC	-78938278	False	NA	NA	False	AATACA	-22	NA	78938292	78938008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_78938000_78938300
WTC11_00067040	chr3	-	646	1	FSM	ENSG00000241095.1	ENST00000492267.1	1507	1	514	347	514	-347	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGGCAGGGTATAC	NA	False	NA	NA	False	NA	NA	NA	82807507	82806861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_82806900_82807500
WTC11_00067041	chr3	-	4411	4	NNC	ENSG00000163320.12	novel	4548	4	NA	NA	0	1597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.324394359985	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGCCCTCAGTGAGC	-88048730	True	NA	NA	False	NA	NA	NA	88058945	88050346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_88050372_88051949_88056000_88058018_88058224_88058814
WTC11_00067042	chr3	-	4344	4	NNC	ENSG00000163320.12	novel	4548	4	NA	NA	0	1597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.324394359985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGCCCTCAGTGAGC	-88048730	True	NA	NA	False	NA	NA	NA	88058945	88050346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_88050373_88052017_88056000_88058018_88058224_88058814
WTC11_00067043	chr3	-	1008	1	FSM	ENSG00000242457.1	ENST00000478252.1	1264	1	240	16	240	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGGACAAGGGTCCTAG	NA	False	NA	NA	False	NA	NA	NA	94076935	94075927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94075900_94076900
WTC11_00067044	chr3	-	316	1	FSM	ENSG00000178660.6	ENST00000313754.4	855	1	621	-82	621	82	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAATTTAAATAGTAAATA	NA	False	NA	NA	False	TATAAA	-41	NA	94506999	94506683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94506700_94507000
WTC11_00067046	chr3	-	1403	6	FSM	ENSG00000080822.17	ENST00000507874.5	1380	6	0	-23	0	23	multi-exon	FALSE	canonical	1	2	junction_1	365.554592366174	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAACGAATTAATAAATT	-98512465	True	NA	NA	False	NA	NA	NA	98522922	98500816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98501521_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521719_98522848
WTC11_00067047	chr3	-	2169	6	FSM	ENSG00000080822.17	ENST00000394185.6	2159	6	0	-10	0	7	multi-exon	FALSE	canonical	2	4	junction_5	373.283484767274	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTGTCTGAATTGAT	-98512528	True	NA	-3	True	AATAAA	-29	NA	98522985	98515472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521719_98522848
WTC11_00067050	chr3	-	526	2	FSM	ENSG00000080819.9	ENST00000510489.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGAGATAACTCATTT	-98582921	False	NA	NA	False	NA	NA	NA	98585862	98581407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98581512_98585440
WTC11_00067051	chr3	-	687	1	FSM	ENSG00000282978.1	ENST00000635481.1	492	1	68	-263	68	263	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAACAAAACAAA	-101457650	False	NA	NA	False	AATAAA	-45	NA	101457664	101456977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101457000_101457700
WTC11_00067052	chr3	-	4145	19	NIC	ENSG00000114423.23	novel	6749	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_18	17.9272363310449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGAGGAGCTTCCCTTTT	-105866159	True	NA	-4	True	AATAAA	-29	NA	105869012	105658268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868531
WTC11_00067053	chr3	-	548	3	FSM	ENSG00000242759.8	ENST00000668075.1	533	3	0	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCTTGGAATCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	106557391	106449759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_106450098_106500716_106500814_106557278
WTC11_00067054	chr3	-	3763	21	NNC	ENSG00000163507.15	novel	4066	21	NA	NA	18	-153	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_19	14.0729350172592	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTGATTTTATTGCT	-108587599	True	NA	-59	True	AAGAAA	-17	NA	108589413	108550138	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583081_108585064_108585213_108589273
WTC11_00067056	chr3	-	4039	9	NNC	ENSG00000121570.13	novel	2788	7	NA	NA	0	73025	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2359.65695335148	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTTATATCTTGTTTGC	-109266337	True	NA	NA	False	NA	NA	NA	109337545	109253118	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109253144_109278874_109278899_109326355_109328025_109328889_109330313_109330332_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
WTC11_00067057	chr3	-	1092	8	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	37.1285686802615	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109315844	True	NA	-4	True	AATAAA	-22	NA	109316475	109293787	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109294005_109300370_109300436_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
WTC11_00067059	chr3	-	319	1	FSM	ENSG00000279349.1	ENST00000623625.1	2595	1	2583	-307	2583	307	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATACACACAGCATTA	-112525546	False	NA	NA	False	NA	NA	NA	112525559	112525240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112525200_112525600
WTC11_00067060	chr3	-	781	6	FSM	ENSG00000091986.16	ENST00000461431.1	781	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.533755265811	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTGATTCGATGCA	-112637800	False	NA	NA	False	NA	NA	NA	112638097	112605599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112605764_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027
WTC11_00067061	chr3	-	1010	2	FSM	ENSG00000091986.16	ENST00000475181.1	1010	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAGGACGATGTGT	-112640759	False	NA	NA	False	NA	NA	NA	112641056	112639399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112639917_112640563
WTC11_00067062	chr3	-	814	3	FSM	ENSG00000163608.15	ENST00000482229.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTATATTGCAAAAATT	-113007994	False	NA	NA	False	NA	NA	NA	113011536	113008170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113008431_113010642_113010705_113011044
WTC11_00067063	chr3	-	360	1	FSM	ENSG00000239280.1	ENST00000496068.1	432	1	135	-63	135	63	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTTTAAAAAAAAAAAAAG	-113741101	False	NA	NA	False	ATTAAA	-5	NA	113741119	113740759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113740800_113741100
WTC11_00067064	chr3	-	426	2	NNC	ENSG00000181722.17	novel	27503	12	NA	NA	0	-172105	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTCCTGATATAAAAA	-115147015	True	NA	0	True	ATTAAA	-15	NA	115147271	115146496	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_115146870_115147218
WTC11_00067065	chr3	-	489	2	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACATTCCACCACAAAAG	NA	False	NA	NA	False	NA	NA	NA	115797042	115793808	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_115793940_115796684
WTC11_00067066	chr3	-	2558	1	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCATGGAAATCTAACCT	NA	False	NA	NA	False	NA	NA	NA	115797706	115795148	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_115795100_115797700
WTC11_00067067	chr3	-	825	2	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTATAGCATGGCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	115798801	115796194	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_115796787_115798568
WTC11_00067073	chr3	-	367	1	FSM	ENSG00000272662.1	ENST00000609598.1	504	1	2	135	2	-135	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCCTACTGCTTCTCAA	-119498130	False	NA	NA	False	NA	NA	NA	119498179	119497812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119497800_119498200
WTC11_00067075	chr3	-	7045	14	NIC	ENSG00000051341.15	novel	8757	30	NA	NA	-9866	5	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	23.863765208802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACAATTGTTTTGTTA	-121491446	False	NA	-7	True	AATAAA	-22	NA	121491462	121431425	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301
WTC11_00067077	chr3	-	2187	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	52.7934458905088	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831210	True	NA	-2	True	AATAAA	-26	NA	121835060	121769993	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_121770575_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
WTC11_00067079	chr3	-	1638	2	FSM	ENSG00000169087.11	ENST00000471534.1	1647	2	13	-4	13	0	multi-exon	FALSE	canonical	3	69	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	NA	False	NA	-18	True	AATAAA	-17	NA	122741763	122739998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122740876_122741002
WTC11_00067080	chr3	-	4228	13	NNC	ENSG00000173175.15	novel	6643	21	NA	NA	-1884	12670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.8317843598589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCCTTGACAGTCTT	-123319807	True	NA	NA	False	NA	NA	NA	123320036	123269625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123269652_123282298_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673
WTC11_00067082	chr3	-	320	2	FSM	ENSG00000206527.10	ENST00000493515.1	529	2	0	209	0	83	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTTATCTTGCAGA	-123500678	False	NA	NA	False	NA	NA	NA	123500693	123499499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123499641_123500514
WTC11_00067083	chr3	-	756	6	FSM	ENSG00000175455.16	ENST00000479903.5	770	6	0	14	0	-14	multi-exon	FALSE	canonical	0	0	junction_1	84.2553262411345	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGGAAGAGGTGGGA	-123946881	False	NA	NA	False	AATACA	-32	NA	123946892	123897524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123897614_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802
WTC11_00067084	chr3	-	3089	8	NIC	ENSG00000175455.16	novel	1221	8	NA	NA	0	-6	intron_retention	FALSE	canonical	3	30	junction_1	65.6362891164605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGTGTCATCTGTC	-123948922	False	NA	NA	False	AATAAA	-17	NA	123948933	123913427	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_123915290_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895
WTC11_00067085	chr3	-	4183	13	NNC	ENSG00000175455.16	novel	4131	13	NA	NA	0	-8	intron_retention	FALSE	canonical	3	8	junction_11	67.3397274191757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAGTTCAGAAATAAAAAA	-123956561	True	NA	NA	False	NA	NA	NA	123961229	123913460	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956648_123956796_123961143
WTC11_00067086	chr3	-	1010	7	FSM	ENSG00000082781.12	ENST00000465464.5	1164	7	154	0	11	0	multi-exon	FALSE	canonical	2	2	junction_4	782.937133846362	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATCCAACCAGATGGT	-124887662	False	NA	NA	False	NA	NA	NA	124887673	124821330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124821475_124841382_124841552_124848308_124848559_124857231_124857314_124859241_124859447_124873445_124873532_124887599
WTC11_00067087	chr3	-	2525	15	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	0	2196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.2484804224347	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCATTTTCTAGCACA	-125515194	True	NA	NA	False	NA	NA	NA	125520181	125444453	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125444489_125446650_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
WTC11_00067089	chr3	-	4694	6	FSM	ENSG00000114544.17	ENST00000506102.5	2351	6	-2298	-45	-272	39	multi-exon	FALSE	canonical	3	57	junction_2	4.95580467734555	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGGGTCTATAAATAACA	-126026041	False	NA	38	True	TTTAAA	-23	NA	126026062	126006317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785
WTC11_00067091	chr3	-	3110	8	NIC	ENSG00000070476.15	novel	3377	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	33.4096405492884	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	-126473852	True	NA	0	True	TATAAA	-41	NA	126475891	126437600	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_126438462_126439631_126439728_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
WTC11_00067092	chr3	-	2075	12	NNC	ENSG00000163870.16	novel	1903	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	76.1904963596982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAATGTGGAGGTTT	-127589448	True	NA	-13	True	AATAAA	-17	NA	127590717	127573069	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127587983_127588161_127590409
WTC11_00067093	chr3	-	1802	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	60.8720789853608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAATGTGGAGGTTT	-127590740	False	354	-13	True	AATAAA	-17	NA	127591094	127573069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
WTC11_00067094	chr3	-	700	2	FSM	ENSG00000231305.4	ENST00000480931.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGCAAGGAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	128865604	128861545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128861923_128865281
WTC11_00067095	chr3	-	202	2	FSM	ENSG00000287110.2	ENST00000653122.1	2719	2	2517	0	2517	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTCCTGTGTGGCCC	-128873524	False	NA	NA	False	NA	NA	NA	128873701	128872348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128872406_128873556
WTC11_00067096	chr3	-	6169	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	0	-135	0	135	multi-exon	FALSE	canonical	2	4	junction_6	4.77664385637157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTGGCTCAGATGT	-128993829	True	NA	NA	False	NA	NA	NA	128994115	128966453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
WTC11_00067097	chr3	-	4431	4	NNC	ENSG00000172780.17	novel	1627	4	NA	NA	11	1	intron_retention	TRUE	canonical	0	0	junction_1	75.4247233265651	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGCCCAGGACTGGTT	-129121719	False	NA	-9	True	ATTAAA	-19	NA	129121793	129087570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129090410_129090432_129091347_129094985_129095170_129121299
WTC11_00067099	chr3	-	4217	4	FSM	ENSG00000172780.17	ENST00000393304.5	4230	4	11	2	11	1	multi-exon	FALSE	canonical	2	8	junction_3	67.8101926130742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGCCCAGGACTGGTT	-129121719	False	NA	-9	True	ATTAAA	-19	NA	129121793	129087570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129121743
WTC11_00067100	chr3	-	263	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	-168	240	-168	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATTTTGGGGGGCTGT	-129164095	False	NA	NA	False	NA	NA	NA	129164108	129163845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129163800_129164100
WTC11_00067102	chr3	-	2476	9	NNC	ENSG00000129071.10	novel	2394	8	NA	NA	0	32982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.63906729206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGGGTGCAGGTCAG	-129434908	True	NA	NA	False	NA	NA	NA	129440007	129397964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129397993_129430951_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
WTC11_00067103	chr3	-	1971	8	NIC	ENSG00000129071.10	novel	2394	8	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_6	106.652209904676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGGCTTTTCCAATGAT	-129434835	True	NA	-2	True	AATAAA	-27	NA	129439934	129431267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437807_129437951_129439729
WTC11_00067105	chr3	-	6048	36	NNC	ENSG00000004399.13	novel	6913	36	NA	NA	772	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	11.6775032276875	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	-129605844	False	NA	-27	True	AATAAA	-20	NA	129605904	129555213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427_129558576_129559619_129559784_129560329_129560435_129560688_129560724_129561645_129561710_129561799_129561904_129562786_129562944_129563093_129563241_129565339_129565539_129565886_129566018_129566526_129566632_129567491_129567605_129567697_129567806_129569842_129569958_129570878_129570936_129571039_129571304_129571508_129571600_129571676_129571845_129572608_129572749_129572841_129572942_129573593_129573746_129574335_129574491_129575468_129575563_129575765_129575856_129578328_129578434_129583566_129583670_129584124_129584234_129584384_129584563_129585951_129586082_129586171_129586273_129586587_129586720_129589350_129589528_129605328
WTC11_00067106	chr3	-	477	5	FSM	ENSG00000004399.13	ENST00000505665.5	477	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.6061432682258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGCCAGCAGCACTCCT	NA	False	NA	NA	False	NA	NA	NA	129586685	129583630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129583670_129584124_129584234_129585951_129586082_129586171_129586273_129586587
WTC11_00067109	chr3	-	1891	1	FSM	ENSG00000249020.1	ENST00000505219.1	137	1	7	-1761	7	1761	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGAATCCAGTGGCTT	-131479207	False	NA	NA	False	NA	NA	NA	131479226	131477335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131477300_131479200
WTC11_00067113	chr3	-	3115	1	FSM	ENSG00000260633.1	ENST00000568384.1	1946	1	-1312	143	-1312	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATATTGATCTTATGTT	-134350532	False	NA	NA	False	AATAAA	-9	NA	134350545	134347430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134347400_134350500
WTC11_00067115	chr3	-	1937	4	FSM	ENSG00000240086.7	ENST00000653803.1	1974	4	11	26	5	1	multi-exon	FALSE	canonical	0	0	junction_1	16.9705627484771	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCTTTGAACATTTAT	-135439169	True	NA	-24	True	AATAGA	-39	NA	135439853	135354810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_135356417_135379261_135379428_135379780_135379848_135439755
WTC11_00067116	chr3	-	4322	35	FSM	ENSG00000118007.13	ENST00000629124.2	4322	35	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_31	22.4247299228046	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTAAATTACCCAAGGGA	-136749063	True	NA	NA	False	NA	NA	NA	136752372	136338094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136586801_136586927_136604308_136604474_136623145_136623249_136630869_136630982_136752194
WTC11_00067117	chr3	-	2587	22	FSM	ENSG00000118007.13	ENST00000487065.5	2914	22	0	327	0	-327	multi-exon	FALSE	canonical	1	2	junction_18	25.1726915345374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGTTTATTGGTATTC	-136749068	True	NA	NA	False	NA	NA	NA	136752377	136417884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136586801_136586927_136604308_136604474_136623145_136623249_136630869_136630982_136752194
WTC11_00067118	chr3	-	2257	1	FSM	ENSG00000272609.1	ENST00000609721.1	474	1	-1993	210	-1993	-210	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGAGAATAATTTCCATT	NA	False	NA	22	True	AATAAA	-39	NA	138007115	138004858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138004900_138007100
WTC11_00067119	chr3	-	255	2	FSM	ENSG00000158163.15	ENST00000473850.1	572	2	317	0	317	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGAAAGAGGTAGCTT	NA	False	NA	NA	False	AAGAAA	-31	NA	138088583	138086973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138087024_138088378
WTC11_00067120	chr3	-	1440	1	FSM	ENSG00000240668.1	ENST00000489121.1	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCAGCCCCTCC	NA	False	NA	NA	False	NA	NA	NA	138102917	138101477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138101500_138102900
WTC11_00067122	chr3	-	2883	18	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	113	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	59.3327955083643	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCTCAGTGATGCT	-138594002	False	NA	-1	True	AATAAA	-25	NA	138594016	138494341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138593708
WTC11_00067123	chr3	-	2310	17	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	58.7622327690158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGTAACACTTATTT	-138591942	False	NA	-9	True	AATAAA	-16	NA	138591956	138496909	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138497328_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
WTC11_00067124	chr3	-	4868	25	NNC	ENSG00000051382.9	novel	6259	24	NA	NA	0	6209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.100215649601	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAGATCATAAAAGAAA	-138829652	True	NA	NA	False	NA	NA	NA	138834833	138646488	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_138646516_138654020_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
WTC11_00067125	chr3	-	1945	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	-376	0	10	multi-exon	FALSE	canonical	2	5	junction_4	2.87054001888146	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACATCAAAAAGTACTAAT	-139677559	True	NA	NA	False	AATAAA	-2	NA	139677946	139560205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
WTC11_00067127	chr3	-	1866	14	NNC	ENSG00000114126.18	novel	1853	14	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	172.400078254763	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGCTCATGTGTGTTT	-142148059	True	NA	-17	True	AATAAA	-27	NA	142149465	141952485	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142093323_142093444_142101734_142101842_142149182
WTC11_00067128	chr3	-	2009	16	NNC	ENSG00000114126.18	novel	1853	14	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	188.076154788426	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGCTCATGTGTGTTT	-142148064	True	NA	-17	True	AATAAA	-27	NA	142149470	141952485	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142000251_142000355_142005440_142005545_142054114_142054150_142093060_142093128_142093323_142093444_142101734_142101842_142149182
WTC11_00067130	chr3	-	233	1	FSM	ENSG00000233597.3	ENST00000498753.1	576	1	340	3	340	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCTCCCCCTTTGTCT	NA	False	NA	NA	False	AAGAAA	-1	NA	142043858	142043625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142043600_142043900
WTC11_00067132	chr3	-	10115	42	FSM	ENSG00000114127.11	ENST00000264951.8	10143	42	25	3	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.0492239345691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTTTGTTCTTTTAT	-142444888	True	NA	-2	True	ATTAAA	-19	NA	142448037	142306609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142311814_142312597_142312759_142313135_142313175_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332532_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
WTC11_00067134	chr3	-	2016	9	NNC	ENSG00000163710.9	novel	1896	9	NA	NA	5	10	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_6	36.9203111444094	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTAAACTTCTTTTTAT	-142888768	True	NA	NA	False	AATAAA	-25	NA	142889201	142817863	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843041_142848216_142848473_142887668_142887778_142888813
WTC11_00067136	chr3	-	247	1	FSM	ENSG00000239797.1	ENST00000463605.1	483	1	52	184	52	-184	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCGAGATAGCTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	145824687	145824440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_145824400_145824700
WTC11_00067137	chr3	-	2908	20	FSM	ENSG00000152952.12	ENST00000494950.5	2908	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	88.2263206560814	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACACAACGTTTTCCTCA	-146160973	False	335	NA	False	NA	NA	NA	146160992	146070180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160788
WTC11_00067138	chr3	-	1442	9	FSM	ENSG00000114698.15	ENST00000446574.6	1442	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	4.78114787472632	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTAACTTTGACAGCT	-146250444	False	NA	NA	False	NA	NA	NA	146250867	146194290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250556
WTC11_00067140	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	106.702577288461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-146544537	False	NA	-20	True	AAAAAG	-40	NA	146544555	146515801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
WTC11_00067141	chr3	-	3124	2	FSM	ENSG00000174963.18	ENST00000494569.5	3317	2	1693	-1500	1151	0	multi-exon	FALSE	canonical	2	5	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTCCTGTTATTGT	-147391230	False	NA	2	True	AATAAA	-30	NA	147391240	147386045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_147388860_147390930
WTC11_00067142	chr3	-	4463	26	NIC	ENSG00000071794.16	novel	3896	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	115.947063783435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075572	True	NA	-23	True	AATAAA	-14	NA	149086504	149030126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041681_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
WTC11_00067145	chr3	-	1586	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	17	-7	17	7	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGGAACTAAAAAACAGC	-150602948	True	NA	NA	False	NA	NA	NA	150603211	150565788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_150567107_150602943
WTC11_00067146	chr3	-	2012	3	NIC	ENSG00000181788.4	novel	427	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	86.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-150763429	False	NA	-19	True	AATAAA	-18	NA	150763440	150741124	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_150742699_150762432_150762571_150763140
WTC11_00067147	chr3	-	1214	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	414.867314799429	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATCTAACATTTTTCTT	-155266159	True	NA	-4	True	AATAAA	-24	NA	155280511	155226753	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155227446_155258618_155258683_155278366_155278560_155280246
WTC11_00067148	chr3	-	3995	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	343.194095957375	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCAAAAGTTTTGTGCTG	-155266159	True	NA	71	True	NA	NA	NA	155280511	155247482	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155250827_155258618_155258683_155265029_155265159_155278366_155278560_155280246
WTC11_00067149	chr3	-	3355	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	352.996104794373	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTTTATTGTGAGAATA	-155266160	True	NA	7	True	AGTAAA	-43	NA	155280512	155247601	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155278366_155278560_155280246
WTC11_00067151	chr3	-	855	4	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	139.687747016933	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGTTATATCCTCTG	-155266135	True	NA	-11	True	AATAAA	-22	NA	155280487	155260380	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265159_155267397_155267648_155280246
WTC11_00067153	chr3	-	2876	1	FSM	ENSG00000214919.3	ENST00000399242.3	1585	1	-878	-413	-878	413	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAACTATTTTTTCCCT	-155741911	False	NA	NA	False	NA	NA	NA	155744604	155741728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155741700_155744600
WTC11_00067154	chr3	-	1686	2	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	53	-252209	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGAGTACTGTCTCGCT	-155742325	True	NA	NA	False	CATAAA	-19	NA	155745018	155742950	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155744458_155744839
WTC11_00067156	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	43.5446769294352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-155851395	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
WTC11_00067157	chr3	-	2734	4	FSM	ENSG00000169359.16	ENST00000646424.1	2734	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	69.0716214438961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGCAGTACCATAATT	-155851412	True	NA	61	True	AGTAAA	-23	NA	155854446	155827268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155828378_155829687_155829904_155833856_155834042_155853222
WTC11_00067158	chr3	-	360	1	FSM	ENSG00000227709.4	ENST00000490318.1	1060	1	568	132	568	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCACAAGCAGGAGAATAC	NA	False	NA	NA	False	NA	NA	NA	156176343	156175983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156176000_156176300
WTC11_00067164	chr3	-	1551	1	FSM	ENSG00000244515.1	ENST00000488218.1	1270	1	1143	-1424	1143	1424	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGAAAGGAAATTTCAGA	NA	False	NA	NA	False	NA	NA	NA	157162789	157161238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157161200_157162800
WTC11_00067165	chr3	-	2323	6	ISM	ENSG00000197415.12	ENST00000392832.6	3044	14	136016	-1156	943	-11	3prime_fragment	FALSE	canonical	2	7	junction_1	2.75680975041804	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTAAATTGTGGTGA	NA	False	NA	-11	True	AATAAA	-12	NA	157363538	157259752	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363
WTC11_00067166	chr3	-	1533	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	4039	-44	19	44	3prime_fragment	FALSE	canonical	3	32	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCTCAGCCCACAGT	-157498685	True	NA	NA	False	AATAAA	-16	NA	157499535	157459474	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
WTC11_00067167	chr3	-	992	4	FSM	ENSG00000197415.12	ENST00000537559.5	992	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.8977121983832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTTGTCTTCTTTTA	-157495464	False	NA	-1	True	AATGAA	-30	NA	157495506	157459620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211
WTC11_00067169	chr3	-	550	2	Genic_Genomic	ENSG00000234851.4	novel	471	1	NA	NA	0	59741	multi-exon	FALSE	non_canonical	0	0	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAGAGACAGAG	-161429557	True	NA	NA	False	NA	NA	NA	161429597	161369385	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_161369413_161429074
WTC11_00067170	chr3	-	3217	21	FSM	ENSG00000169064.13	ENST00000392766.6	3250	21	33	0	15	0	multi-exon	FALSE	canonical	1	2	junction_18	4.0137264480779	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAAACTTTTCATA	-167380096	True	NA	NA	False	AATAAA	-27	NA	167380268	167240286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167240920_167242504_167242644_167282237_167282496_167298304_167298459_167305642_167305951_167313973_167314117_167315749_167315830_167317004_167317106_167317487_167317598_167322116_167322238_167327941_167328117_167333826_167333986_167350419_167350516_167359869_167359980_167360674_167360724_167365885_167365977_167368460_167368575_167372833_167372951_167373705_167373788_167379637_167379793_167380246
WTC11_00067172	chr3	-	4369	16	NNC	ENSG00000173905.9	novel	4310	16	NA	NA	-42	14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	3.40196021924615	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTGGTCTCTTATT	-168095910	False	NA	-6	True	AATAAA	-29	NA	168095966	168008674	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029219_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
WTC11_00067173	chr3	-	4985	16	NIC	ENSG00000085276.19	novel	5462	17	NA	NA	-285	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	6.55235326682966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTCCCCACTGTGTG	-169146931	False	NA	-9	True	AATAAA	-16	NA	169146960	169083506	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_169085044_169088999_169089184_169089999_169090237_169092957_169093103_169095075_169095246_169100884_169100963_169102059_169102227_169107925_169107953_169112786_169112875_169115382_169116740_169121055_169121210_169122579_169122728_169127843_169128061_169131428_169131532_169143697_169143833_169146722
WTC11_00067174	chr3	-	2515	10	NIC	ENSG00000171757.17	novel	2383	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	9.91195811029521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812548	True	NA	5	True	ATTAAA	-28	NA	169812904	169793472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_169793839_169795484_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
WTC11_00067176	chr3	-	279	1	FSM	ENSG00000213174.3	ENST00000398900.2	414	1	114	21	114	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCACAAAGAGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	170654145	170653866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170653900_170654100
WTC11_00067177	chr3	-	459	4	FSM	ENSG00000075651.17	ENST00000481505.1	491	4	32	0	32	0	multi-exon	FALSE	canonical	2	5	junction_3	0.471404520791032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGTTCCCTCCCAG	NA	False	NA	NA	False	NA	NA	NA	171708838	171688694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171688877_171692331_171692443_171699744_171699827_171708754
WTC11_00067178	chr3	-	969	9	FSM	ENSG00000075651.17	ENST00000498278.5	996	9	12	15	12	-15	multi-exon	FALSE	canonical	0	0	junction_8	2.59807621135332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACATTTCAAATATTTA	-171810302	True	NA	NA	False	NA	NA	NA	171810425	171713892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171714046_171724695_171724789_171726017_171726077_171733443_171733510_171734864_171734971_171735491_171735638_171737531_171737660_171737891_171738083_171810398
WTC11_00067179	chr3	-	610	1	FSM	ENSG00000227440.1	ENST00000430660.1	441	1	-90	-79	-90	79	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCATTAAACACAACGT	NA	False	NA	NA	False	NA	NA	NA	172829266	172828656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172828700_172829300
WTC11_00067180	chr3	-	6514	16	NNC	ENSG00000177565.18	novel	2535	17	NA	NA	18517	1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.0589520811034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTCCAAGCCACTTT	NA	False	NA	NA	False	NA	NA	NA	177079976	177017422	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_177017451_177020751_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826
WTC11_00067182	chr3	-	6946	17	NIC	ENSG00000177565.18	novel	2535	17	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_15	80.5917324776556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	-177197545	False	NA	-2	True	AATAAA	-17	NA	177197569	177020753	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177131362_177131450_177197120
WTC11_00067185	chr3	-	555	3	NNC	ENSG00000237978.6	novel	964	8	NA	NA	-2	25	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	42.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859250	True	NA	-5	True	NA	NA	NA	178860354	178748962	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_178749237_178859488_178859624_178860208
WTC11_00067186	chr3	-	1474	3	FSM	ENSG00000171121.17	ENST00000392685.7	1085	3	-382	-7	119	7	multi-exon	FALSE	canonical	2	6	junction_1	3	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATTTTGTATTCTATT	-179251040	False	NA	NA	False	ATTAAA	-34	NA	179251496	179242763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179243285_179244494_179244694_179250742
WTC11_00067187	chr3	-	1125	8	FSM	ENSG00000114450.11	ENST00000674927.1	1696	8	0	571	0	-571	multi-exon	FALSE	canonical	3	58	junction_2	9.40690150465962	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATATTTTCTTATTT	-179426189	True	NA	NA	False	NA	NA	NA	179426200	179404980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143
WTC11_00067188	chr3	-	776	8	FSM	ENSG00000114450.11	ENST00000465153.2	978	8	0	202	0	-202	multi-exon	FALSE	canonical	3	5	junction_1	25.5550625999976	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGAAGATTACACATCT	-179426189	True	NA	NA	False	NA	NA	NA	179426200	179410520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179410598_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143
WTC11_00067189	chr3	-	779	1	FSM	ENSG00000272910.1	ENST00000608818.1	501	1	-148	-130	-148	130	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAAATGTCTGGGGA	-179583881	False	NA	NA	False	TTTAAA	-22	NA	179583910	179583131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179583100_179583900
WTC11_00067194	chr3	-	1260	10	NNC	ENSG00000175193.14	novel	1240	9	NA	NA	0	33816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	427.415170993101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCCGTGTGGTGGCATG	-183873978	True	NA	NA	False	NA	NA	NA	183884879	183795454	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_183795484_183829389_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
WTC11_00067195	chr3	-	5716	29	FSM	ENSG00000114770.17	ENST00000265586.10	5712	29	0	-4	0	0	multi-exon	FALSE	canonical	1	8	junction_8	38.5767853423136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	-184014656	True	NA	-3	True	AATAAA	-22	NA	184017939	183919933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
WTC11_00067200	chr3	-	2577	7	FSM	ENSG00000113790.11	ENST00000456310.5	2577	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.63964143856288	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAGGCATAAGTTGAGA	-185253750	True	NA	NA	False	AATATA	-24	NA	185254048	185191969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253825
WTC11_00067206	chr3	-	3634	17	NNC	ENSG00000073792.16	novel	4283	16	NA	NA	0	35815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.032992161211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTATCTCTTCCTAAT	-185810352	True	NA	NA	False	AAAAAG	-5	NA	185825012	185607314	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_185607346_185643779_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
WTC11_00067212	chr3	-	1347	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	43	-19957	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	303.528508637254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAAAATGTCAAAGTCC	-187180811	False	NA	-5	True	AATAAA	-17	NA	187180865	187140904	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141178_187142295_187143109_187173615_187173676_187180664
WTC11_00067213	chr3	-	3788	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	23	-50630	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATATTTTCTTGTAC	-187180831	False	NA	-18	True	AATAAA	-14	NA	187180885	187171577	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187175145_187180664
WTC11_00067221	chr3	-	872	4	FSM	ENSG00000184203.8	ENST00000418939.1	872	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	169.330708641076	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACTGTTGCATTTTCTG	-195529847	True	NA	NA	False	NA	NA	NA	195529861	195516384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195516943_195519017_195519186_195524818_195524897_195529793
WTC11_00067227	chr3	-	711	6	NNC	ENSG00000213123.11	novel	625	5	NA	NA	-4	11392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.974115183736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGACTGGATAGGAGTC	-196315843	True	NA	NA	False	NA	NA	NA	196318303	196279826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196279850_196291218_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
WTC11_00067232	chr3	-	3963	25	NIC	ENSG00000075711.21	novel	4853	25	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	2	7	junction_24	64.9214134978249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTATGGGAATTATTT	-197299259	True	NA	NA	False	AATAAA	-37	NA	197299307	197043635	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197299044
WTC11_00067236	chr3	-	2407	9	NIC	ENSG00000214135.9	novel	1118	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	45.5588561643068	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	-197623484	True	NA	-4	True	AATAAA	-18	NA	197627871	197611534	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197611623_197613224_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
WTC11_00067240	chr3	+	2080	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGCCCAGGCTTGTG	32826602	False	NA	NA	False	ATTAAA	-31	NA	32826617	32828697	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_32826600_32828700
WTC11_00067241	chr3	+	1805	1	FSM	ENSG00000289507.1	ENST00000685341.1	1319	1	-500	14	-500	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTTCCAATCTGTA	NA	False	NA	NA	False	AATAAA	-10	NA	47349282	47351087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47349300_47351100
WTC11_00067242	chr3	+	263	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48714579	48714842	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_48714600_48714800
WTC11_00067243	chr3	+	322	1	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTGTTTCCAGATG	NA	False	NA	NA	False	NA	NA	NA	76435522	76435844	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_76435500_76435800
WTC11_00067244	chr3	+	683	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGCTCTTATACTCACT	NA	False	NA	NA	False	AATAAA	-10	NA	94505889	94506572	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_94505900_94506600
WTC11_00067245	chr3	+	662	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109330873	109331535	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_109330900_109331500
WTC11_00067246	chr3	+	835	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCCATGTTTGTATAA	NA	False	NA	NA	False	AAGAAA	-31	NA	112183348	112184183	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112183300_112184200
WTC11_00067247	chr3	+	2300	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCCCAGGTAATTTGC	NA	False	NA	NA	False	NA	NA	NA	116105391	116107691	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_116105400_116107700
WTC11_00067248	chr3	+	410	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAGTCAGGAAACTAAAATA	NA	False	NA	NA	False	NA	NA	NA	128963519	128963929	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_128963500_128963900
WTC11_00067249	chr3	+	250	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGGCTGTCTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	145553278	145553528	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_145553300_145553500
WTC11_00067250	chr3	+	454	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGCCCAGGATTCC	148153495	False	NA	NA	False	NA	NA	NA	148153505	148153959	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148153500_148154000
WTC11_00067251	chr3	+	225	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAGAATAAGATGATGG	NA	False	NA	NA	False	AGTAAA	-25	NA	156713634	156713859	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_156713600_156713900
WTC11_00067252	chr3	+	213	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTGCAATGCCGC	NA	False	NA	NA	False	NA	NA	NA	171577561	171577774	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_171577600_171577800
WTC11_00067253	chr3	+	8736	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACCTTCTTGCTGCAG	NA	False	NA	NA	False	ATTAAA	-7	NA	176309684	176318420	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_176309700_176318400
WTC11_00067257	chr4	+	4341	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	22	-2364	4	1679	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGATTGTATAATTTC	49635	True	NA	NA	False	NA	NA	NA	53307	89887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53492_85730
WTC11_00067258	chr4	+	2885	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	-13	0	4	0	multi-exon	FALSE	canonical	3	70	junction_3	5.24933858267454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	49635	True	NA	NA	False	AATAAA	-23	NA	53307	88208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53492_59429_59557_60057_60154_85730
WTC11_00067259	chr4	+	936	4	NNC	ENSG00000272602.6	novel	1072	4	NA	NA	127	-8102	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	35.8360464089194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGTCCTGCTTTAT	49783	False	NA	NA	False	AATGAA	-23	NA	53455	79419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_53492_59429_59557_60057_60154_78742
WTC11_00067260	chr4	+	4510	1	FSM	ENSG00000289361.1	ENST00000688555.1	1549	1	-3	-2958	-3	2958	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCAAGAAGAGAAATTCT	NA	False	NA	NA	False	NA	NA	NA	89936	94446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89900_94400
WTC11_00067261	chr4	+	4120	4	NNC	ENSG00000250312.8	novel	3647	4	NA	NA	-7	495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.1070255914995	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGTGTTAAGTAACA	120914	True	NA	3	True	AATAAA	-15	NA	124493	164657	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_124674_126847_126922_127007_127126_160909
WTC11_00067262	chr4	+	4743	4	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-7	495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.8193010820572	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGTGTTAAGTAACA	120914	True	NA	3	True	AATAAA	-15	NA	124493	164657	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_125297_126847_126922_127007_127126_160909
WTC11_00067263	chr4	+	210	3	NIC	ENSG00000250312.8	novel	1199	5	NA	NA	117	-612	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGAATCATAAATTTGG	121075	False	NA	NA	False	NA	NA	NA	124654	201691	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_124674_201080_201212_201631
WTC11_00067264	chr4	+	736	1	FSM	ENSG00000275426.1	ENST00000618815.1	580	1	-297	141	-297	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATCTGTTTTAAAATG	NA	False	NA	NA	False	NA	NA	NA	149440	150176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_149400_150200
WTC11_00067265	chr4	+	2592	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	6	0	6	0	multi-exon	FALSE	canonical	3	151	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	209624	True	NA	92	True	TATAAA	-15	NA	212615	255985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_212782_253559
WTC11_00067267	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.0921211313239	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	337441	True	NA	17	True	AATAAA	-20	NA	337813	384868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_337987_343781_343909_344334_344431_372663
WTC11_00067269	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	30.2474746420626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	496002	True	NA	12	True	AATAAA	-20	NA	499209	540200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
WTC11_00067271	chr4	+	5274	15	NNC	ENSG00000174227.16	novel	3909	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	2	4	junction_3	50.8693805501013	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATACAGTTTGTATCAT	496045	True	NA	NA	False	AATAAA	-10	NA	499252	539522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_499490_500395_500602_501100_501171_505717_505928_507404_507594_508828_508971_515972_516186_516338_516477_521055_521228_521659_521942_523458_525838_527038_527231_530435_530746_533817_533982_539152
WTC11_00067274	chr4	+	3519	2	FSM	ENSG00000174227.16	ENST00000513239.5	3519	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	530826	False	NA	NA	False	AATAAA	-17	NA	530839	539529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_533982_539152
WTC11_00067275	chr4	+	541	2	FSM	ENSG00000133256.13	ENST00000460119.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGGAAGTCCAGAGCA	662994	True	NA	NA	False	NA	NA	NA	663722	664922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_664222_664880
WTC11_00067276	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.1630322835121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	663041	True	NA	NA	False	NA	NA	NA	663769	670193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
WTC11_00067277	chr4	+	2956	8	FSM	ENSG00000215375.6	ENST00000506838.5	2956	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	15.4536832674483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTGCGAGTCTGCC	673278	True	NA	22	True	AATAAA	-14	NA	673579	682027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_675855_676072_676210_678665_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
WTC11_00067281	chr4	+	1189	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	-14	0	5	0	multi-exon	TRUE	canonical	3	107	junction_3	7.93025150224688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	703325	True	NA	9	True	AATAAA	-22	NA	705769	734479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_705971_730629_730669_730969_731111_733671
WTC11_00067282	chr4	+	5680	11	FSM	ENSG00000185619.18	ENST00000362003.9	5685	11	5	0	5	0	multi-exon	FALSE	canonical	3	91	junction_4	16.8712773671705	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAACAATTCTGAAACTC	703325	True	NA	NA	False	AGTAAA	-1	NA	705769	770640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
WTC11_00067285	chr4	+	1519	9	FSM	ENSG00000127419.17	ENST00000515740.5	1514	9	-5	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	17.2843860174436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCAGGCCGCAGTGGT	931481	True	NA	-59	True	NA	NA	NA	932459	958575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_932541_950420_950519_951206_951259_951645_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
WTC11_00067289	chr4	+	708	4	FSM	ENSG00000127415.13	ENST00000506561.5	692	4	-16	0	-6	0	multi-exon	FALSE	canonical	3	7	junction_3	2.35702260395516	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTGGGCTTGGTGGGT	986743	True	NA	NA	False	NA	NA	NA	987059	1001179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881
WTC11_00067290	chr4	+	558	2	FSM	ENSG00000127415.13	ENST00000502829.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCCTGCGCCCCGCGCT	1002728	False	NA	NA	False	NA	NA	NA	1002740	1003389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1002945_1003035
WTC11_00067291	chr4	+	3457	7	FSM	ENSG00000127418.15	ENST00000510644.6	3411	7	-47	1	-47	0	multi-exon	FALSE	canonical	3	55	junction_1	13.9124245031395	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTGTTTCTGCCCAT	1010548	True	NA	25	True	NA	NA	NA	1011578	1026897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1011955_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310_1024665_1024904
WTC11_00067292	chr4	+	3409	6	ISM	ENSG00000127418.15	ENST00000510644.6	3411	7	242	0	242	0	intron_retention	FALSE	canonical	3	55	junction_1	15.1525575399006	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTTTCTGCCCATG	1011850	False	NA	26	True	NA	NA	NA	1011867	1026898	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_1011955_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310
WTC11_00067293	chr4	+	571	2	FSM	ENSG00000127418.15	ENST00000512174.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCAGGGGCTGAAGGTGAA	1012138	False	NA	NA	False	NA	NA	NA	1012154	1022363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1012565_1022202
WTC11_00067295	chr4	+	217	1	FSM	ENSG00000273179.1	ENST00000609548.1	397	1	-76	256	-76	-256	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACATCGTGGCAGAGTA	NA	False	NA	NA	False	NA	NA	NA	1167701	1167918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1167700_1167900
WTC11_00067296	chr4	+	7391	1	FSM	ENSG00000196810.5	ENST00000581398.1	5652	1	-1343	-396	-384	396	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCGTGGTGGTGGATA	1248839	True	NA	NA	False	NA	NA	NA	1248915	1256306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1248900_1256300
WTC11_00067300	chr4	+	866	6	FSM	ENSG00000090316.16	ENST00000503653.5	845	6	-21	0	-17	0	multi-exon	FALSE	canonical	3	22	junction_4	289.058056452333	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTACCTCCCGTGCGC	1281814	True	NA	NA	False	NA	NA	NA	1289869	1336994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1332756_1332866_1336860
WTC11_00067302	chr4	+	2203	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	-21	0	-17	0	multi-exon	FALSE	canonical	3	678	junction_6	40.051334247438	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	1281814	True	NA	37	True	AATAAA	-45	NA	1289869	1340137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
WTC11_00067303	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	268.913658179639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	1281858	True	NA	NA	False	NA	NA	NA	1289913	1339179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
WTC11_00067305	chr4	+	5371	3	FSM	ENSG00000090316.16	ENST00000506530.5	5371	3	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	1329329	False	NA	36	True	AATAAA	-44	NA	1329343	1340136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1332866_1336860_1336995_1338421
WTC11_00067306	chr4	+	3136	3	FSM	ENSG00000090316.16	ENST00000515766.1	3136	3	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGGCTGCCGTGCGTT	1332546	False	NA	47	True	AATAAA	-29	NA	1332560	1340147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1332866_1336860_1338618_1339073
WTC11_00067307	chr4	+	12504	14	FSM	ENSG00000163945.19	ENST00000511216.6	12504	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7026754179418	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTTTGTGACCAAGT	1344466	True	NA	22	True	ATTAAA	-15	NA	1347265	1395989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1347610_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
WTC11_00067308	chr4	+	2597	14	FSM	ENSG00000163945.19	ENST00000507531.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.7642845784198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCTTGTCGTGGTGT	1347681	False	NA	NA	False	NA	NA	NA	1347705	1386244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1347888_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
WTC11_00067309	chr4	+	13737	8	ISM	ENSG00000163945.19	ENST00000511216.6	12504	14	6881	2	-360	-2	intron_retention	FALSE	canonical	3	28	junction_6	8.10391691639019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGTGTTTGTGACCAA	1354136	False	NA	20	True	ATTAAA	-13	NA	1354146	1395987	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765
WTC11_00067311	chr4	+	2858	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	-67	8	-46	0	multi-exon	FALSE	canonical	3	712	junction_3	106.258092502276	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	1707725	True	NA	31	True	AATAAA	-12	NA	1721453	1745163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
WTC11_00067313	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	249.128245393936	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	1707771	True	NA	31	True	AATAAA	-12	NA	1721499	1745163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
WTC11_00067315	chr4	+	2943	13	FSM	ENSG00000013810.21	ENST00000651817.1	2943	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	271.69647075776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTCTTCAACTTTTT	1728401	False	NA	-37	True	NA	NA	NA	1728412	1745095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1738347_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
WTC11_00067319	chr4	+	551	2	FSM	ENSG00000013810.21	ENST00000484264.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCATGTTCTTTTTTCT	1744362	False	NA	27	True	NA	NA	NA	1744438	1745076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1744625_1744711
WTC11_00067320	chr4	+	4311	18	FSM	ENSG00000068078.20	ENST00000440486.8	4301	18	-10	0	-10	0	multi-exon	FALSE	canonical	3	33	junction_1	11.1591196586959	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCCTGTGCTTTCTGT	1792756	True	NA	33	True	AATAAA	-17	NA	1793282	1808867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1793466_1793832_1794044_1799253_1799524_1799746_1799813_1801366_1801537_1801619_1801744_1801834_1802026_1803691_1803837_1804329_1804521_1804823_1804970_1805354_1805477_1805558_1805670_1805749_1805941_1806050_1806174_1806256_1806328_1806545_1806684_1806828_1806935_1807115
WTC11_00067323	chr4	+	545	3	FSM	ENSG00000068078.20	ENST00000474521.1	545	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCGCTCCCGCCCCGGCT	1801102	False	NA	NA	False	NA	NA	NA	1801628	1803152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1801744_1801834_1802026_1802913
WTC11_00067325	chr4	+	3384	5	FSM	ENSG00000109685.19	ENST00000508355.5	2092	5	-313	-979	-252	979	multi-exon	FALSE	canonical	3	234	junction_2	8.27647267862342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGGCGTGGTGGCTCC	1870997	True	NA	NA	False	NA	NA	NA	1871140	1920166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140
WTC11_00067326	chr4	+	3950	8	NIC	ENSG00000109685.19	novel	3964	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_7	84.6635598551522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTAGTGTTCATTT	1869577	True	NA	NA	False	ATTAAA	-25	NA	1871392	1941750	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1939653
WTC11_00067327	chr4	+	3268	10	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	0	-189	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	63.0827401019124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTGTGTGTGGCG	1869577	True	NA	7	True	AATAAA	-19	NA	1871392	1943546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1942338
WTC11_00067328	chr4	+	7560	22	FSM	ENSG00000109685.19	ENST00000508803.6	7560	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	62.8947218115005	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTAACTTATTTTA	1869577	True	NA	13	True	ATTAAA	-15	NA	1871392	1982192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
WTC11_00067329	chr4	+	3971	9	FSM	ENSG00000109685.19	ENST00000514045.5	3964	9	-7	0	0	0	multi-exon	FALSE	canonical	3	199	junction_7	18.9604852258585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTAGTGTTCATTT	1869638	True	NA	NA	False	ATTAAA	-25	NA	1871453	1941750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653
WTC11_00067330	chr4	+	7675	23	FSM	ENSG00000109685.19	ENST00000382892.6	7706	23	31	0	31	0	multi-exon	FALSE	canonical	0	0	junction_1	92.8184934550908	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTATATGGGATTGT	NA	False	NA	24	True	ATTAAA	-26	NA	1892812	1982203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1892892_1899220_1899396_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
WTC11_00067338	chr4	+	437	4	FSM	ENSG00000243449.8	ENST00000409248.10	425	4	-12	0	-12	0	multi-exon	TRUE	canonical	3	733	junction_1	137.526563090756	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	2041982	2043964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2042069_2042326_2042485_2042735_2042825_2043860
WTC11_00067339	chr4	+	536	4	FSM	ENSG00000243449.8	ENST00000409860.1	477	4	-59	0	-4	0	multi-exon	FALSE	canonical	3	61	junction_1	453.903318144098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	2038110	True	NA	13	True	AATAAA	-13	NA	2041990	2043964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2042176_2042326_2042485_2042735_2042825_2043860
WTC11_00067340	chr4	+	6056	3	FSM	ENSG00000185818.8	ENST00000423729.3	6056	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTCCCGTGCTCTCTT	2058838	True	NA	24	True	AATAAA	-17	NA	2059326	2069089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2059888_2060997_2061163_2063759
WTC11_00067345	chr4	+	2945	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	-24	0	14	0	multi-exon	FALSE	canonical	1	251	junction_4	200.045709062418	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	2461589	True	NA	19	True	AATAAA	-20	NA	2469081	2515857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
WTC11_00067348	chr4	+	5091	21	Fusion	ENSG00000125386.16_ENSG00000063978.16	novel	579	2	NA	NA	-1023	0	multi-exon	FALSE	canonical	1	3	junction_1	22.7153582406265	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGGCTGCTTCTTTCT	2535451	False	NA	21	True	AATACA	-15	NA	2535623	2732573	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_+_2535717_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2689505_2689705_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2731774
WTC11_00067349	chr4	+	5535	21	FSM	ENSG00000125386.16	ENST00000637812.2	5522	21	-13	0	-13	0	multi-exon	FALSE	canonical	3	37	junction_1	19.1323678618199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGGCTGCTTCTTTCT	2535128	True	NA	21	True	AATACA	-15	NA	2536633	2732573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2537171_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2689505_2689705_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2731774
WTC11_00067353	chr4	+	9019	13	FSM	ENSG00000087266.17	ENST00000503393.8	9006	13	-13	0	0	0	multi-exon	TRUE	canonical	1	20	junction_1	28.3091808822195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTCTCACTTGTGTT	2792319	True	NA	12	True	ATTAAA	-23	NA	2793071	2841096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2793139_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
WTC11_00067354	chr4	+	2353	13	FSM	ENSG00000087266.17	ENST00000511747.6	2351	13	-2	0	-2	0	multi-exon	FALSE	canonical	1	29	junction_9	21.0652096015102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTGGGGCTTGAT	2817018	True	NA	24	True	AATAAA	-18	NA	2818182	2834289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
WTC11_00067356	chr4	+	917	4	FSM	ENSG00000087266.17	ENST00000505941.5	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCCCAGCCCGGAGC	2824740	False	NA	NA	False	NA	NA	NA	2824750	2829805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2825197_2827229_2827319_2827605_2827675_2829492
WTC11_00067361	chr4	+	4158	16	FSM	ENSG00000087274.19	ENST00000683351.1	4140	16	-18	0	-18	0	multi-exon	TRUE	canonical	3	22	junction_12	346.56898623827	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835412	True	NA	13	True	AATAAA	-14	NA	2843825	2930062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2909338_2909432_2914883_2915041_2926013_2926113_2928170
WTC11_00067362	chr4	+	4065	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	-20	0	-7	0	multi-exon	FALSE	canonical	3	81	junction_10	226.659514943198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	2835423	True	NA	24	True	AATAAA	-25	NA	2843836	2930073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
WTC11_00067363	chr4	+	4099	16	FSM	ENSG00000087274.19	ENST00000398125.5	4079	16	-20	0	-7	0	multi-exon	FALSE	canonical	3	81	junction_10	286.417224807913	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	2835423	True	NA	24	True	AATAAA	-25	NA	2843836	2930073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
WTC11_00067365	chr4	+	3959	16	NIC	ENSG00000087274.19	novel	4079	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	243	junction_14	221.492272250448	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835459	True	NA	13	True	AATAAA	-14	NA	2843872	2930062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
WTC11_00067367	chr4	+	3972	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-18	0	intron_retention	FALSE	canonical	3	597	junction_14	104.515622306536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835412	True	NA	13	True	AATAAA	-14	NA	2843825	2930062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
WTC11_00067369	chr4	+	1575	9	FSM	ENSG00000087274.19	ENST00000509039.5	1569	9	-6	0	0	0	multi-exon	FALSE	canonical	3	853	junction_4	43.5572539882853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCAGGTATTTAGGCT	2835559	True	NA	NA	False	NA	NA	NA	2843972	2899777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258
WTC11_00067373	chr4	+	3787	14	FSM	ENSG00000087274.19	ENST00000398129.5	3787	14	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_13	108.458865215283	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCAGTTTTATAT	2875829	True	NA	27	True	AATAAA	-28	NA	2875895	2930076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
WTC11_00067378	chr4	+	2552	5	FSM	ENSG00000249673.8	ENST00000658490.1	2541	5	-11	0	2	0	multi-exon	FALSE	canonical	3	9	junction_2	4.49305018890286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCCACACCAGCAG	2933726	True	NA	-5	True	AATAAA	-8	NA	2934895	2940497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2940301
WTC11_00067379	chr4	+	5465	4	FSM	ENSG00000249673.8	ENST00000662831.1	3023	4	-233	-2209	0	509	multi-exon	FALSE	canonical	3	9	junction_1	4.54606056566195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCTGATCCTGCCTGA	2933737	True	NA	NA	False	NA	NA	NA	2934906	2942560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2937845_2937974_2938143_2938692_2938793_2940301
WTC11_00067380	chr4	+	653	5	FSM	ENSG00000249673.8	ENST00000685071.1	761	5	54	54	8	13	multi-exon	FALSE	canonical	1	3	junction_1	6.51920240520265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCGGCCAGGCCAACCCA	2933778	True	NA	-48	True	NA	NA	NA	2934947	2940454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2935087_2937751_2937845_2937974_2938143_2938692_2938793_2940301
WTC11_00067381	chr4	+	13475	67	FSM	ENSG00000197386.14	ENST00000355072.11	13472	67	-3	0	-3	0	multi-exon	TRUE	canonical	2	23	junction_9	39.4370306280361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTTGCTGTGTGAGG	3069248	True	NA	27	True	ATTAAA	-19	NA	3074677	3243957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888_3122937_3125548_3125630_3127263_3127605_3129923_3130048_3130304_3130424_3131285_3131398_3131637_3131776_3132561_3132721_3132813_3132912_3134400_3134541_3135903_3135968_3136225_3136327_3140509_3140657_3142765_3142887_3145151_3145229_3146796_3146949_3148004_3148208_3154292_3154420_3157071_3157200_3160281_3160393_3172319_3172398_3172907_3173132_3174720_3174800_3174945_3175108_3177331_3177388_3178297_3178447_3180514_3180652_3182353_3182471_3186596_3186720_3187650_3187887_3188950_3189094_3199731_3199940_3204006_3204149_3206495_3206676_3206806_3206984_3207280_3207358_3208772_3208912_3209826_3209950_3211928_3212143_3212563_3212710_3213957_3214136_3215109_3215212_3217764_3217953_3220181_3220309_3222386_3222488_3223405_3223561_3223991_3224132_3225660_3225744_3228614_3228746_3228879_3229010_3229886_3230043_3233162_3233354_3235283_3235399_3235564_3235779_3236148_3236255_3238446_3238610_3238817_3238979_3239845
WTC11_00067382	chr4	+	3644	9	ISM	ENSG00000197386.14	ENST00000680291.1	7184	41	164	77628	164	356	intron_retention	FALSE	canonical	3	24	junction_2	5.80813007774447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTAGTTTTGGTACACA	3074831	False	NA	NA	False	ATTAAA	-16	NA	3074844	3123822	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227
WTC11_00067383	chr4	+	420	3	FSM	ENSG00000197386.14	ENST00000509618.1	429	3	0	9	0	-9	multi-exon	FALSE	canonical	3	60	junction_1	8	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGCGAACATCTTCTAAT	3160332	True	NA	NA	False	AATAAA	-11	NA	3160361	3173218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3160393_3172319_3172398_3172907
WTC11_00067384	chr4	+	449	2	FSM	ENSG00000197386.14	ENST00000509751.1	723	2	0	274	0	-274	multi-exon	FALSE	canonical	3	121	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTATTTGAAAAGCAAG	3211890	False	NA	NA	False	GGGGCT	-21	NA	3211911	3212781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3212143_3212563
WTC11_00067385	chr4	+	432	4	FSM	ENSG00000197386.14	ENST00000513806.1	432	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	62.744632351213	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGTGGGCCCTGGCTG	3228694	False	NA	NA	False	NA	NA	NA	3228712	3235396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3228746_3228879_3229010_3229886_3230043_3235283
WTC11_00067386	chr4	+	401	2	FSM	ENSG00000197386.14	ENST00000512068.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGAGCTGATGTATGT	3228626	False	NA	NA	False	NA	NA	NA	3228644	3229922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3229010_3229886
WTC11_00067387	chr4	+	1547	8	FSM	ENSG00000159788.20	ENST00000506631.5	1530	8	-17	0	-10	0	multi-exon	FALSE	canonical	2	12	junction_1	17.6542762351719	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTTCTTCGCACATC	3291434	True	NA	NA	False	GGGGCT	-21	NA	3293010	3418119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387
WTC11_00067388	chr4	+	5605	17	ISM	ENSG00000159788.20	ENST00000336727.8	4753	18	-10	7657	-10	6	5prime_fragment	FALSE	canonical	3	29	junction_16	10.8108741552198	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCACACATTTTTAGGAG	3291434	True	NA	106	True	AATAAA	-21	NA	3293010	3432256	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3293100_3316069_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406
WTC11_00067391	chr4	+	4668	17	ISM	ENSG00000159788.20	ENST00000344733.9	5469	18	1923	-2	2	2	3prime_fragment	FALSE	canonical	3	23	junction_16	11.8453577404821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAAGCGTCGGCCTGGTG	3316058	True	NA	5	True	AATAAA	-13	NA	3316069	3439907	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406_3430956_3439454
WTC11_00067395	chr4	+	2142	1	FSM	ENSG00000184160.8	ENST00000330055.7	2142	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGTGCCGCAGTCAGT	3766344	True	NA	14	True	AATAAA	-15	NA	3766384	3768526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3766400_3768500
WTC11_00067396	chr4	+	3634	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3926773	True	NA	20	True	AATAAA	-22	NA	3927763	3933044	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3929642
WTC11_00067397	chr4	+	2908	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35679610833356	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	4289120	True	NA	NA	False	AATAAA	-18	NA	4290228	4321783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
WTC11_00067398	chr4	+	2492	7	FSM	ENSG00000168826.16	ENST00000503703.5	2520	7	0	28	0	-25	multi-exon	FALSE	canonical	1	3	junction_2	11.5866302262565	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAAATGAAACTTTTCT	4289142	True	NA	NA	False	NA	NA	NA	4290250	4321758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4290353_4299926_4300098_4302310_4303092_4313040_4313115_4315635_4315719_4315808_4315971_4320639
WTC11_00067400	chr4	+	492	3	FSM	ENSG00000168826.16	ENST00000511458.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCGTACACATGTGAGA	NA	False	NA	NA	False	NA	NA	NA	4302731	4320697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4303092_4313040_4313115_4320639
WTC11_00067401	chr4	+	2266	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	70	junction_1	30.7652401258303	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	4385295	True	NA	-45	True	NA	NA	NA	4386525	4418999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
WTC11_00067402	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	55.4739578541138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4386255	4419058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
WTC11_00067403	chr4	+	2770	5	FSM	ENSG00000168824.15	ENST00000621129.5	2279	5	-550	59	14	0	multi-exon	FALSE	canonical	3	72	junction_1	29.9040131086114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	4385321	True	NA	-45	True	NA	NA	NA	4386551	4418999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
WTC11_00067404	chr4	+	3187	3	FSM	ENSG00000247708.8	ENST00000663324.1	3167	3	-20	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAAATTTCATGATG	4542107	False	NA	NA	False	NA	NA	NA	4542122	4562907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4542626_4544737_4544908_4560393
WTC11_00067411	chr4	+	1142	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	1	-95	1	95	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTGAAAATGTGGAAACA	NA	False	NA	NA	False	TATAAA	-3	NA	4820405	4821547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4820400_4821500
WTC11_00067412	chr4	+	6427	21	FSM	ENSG00000072840.13	ENST00000264956.11	6427	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	17.4367428151017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTCTGACCTGTACTT	5710051	True	NA	8	True	NA	NA	NA	5711200	5814305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5711555_5719247_5719374_5729306_5729391_5731424_5731658_5733350_5733436_5741715_5741815_5745203_5745342_5748147_5748307_5752835_5753053_5753784_5753934_5756263_5756363_5783551_5783765_5793607_5793718_5797021_5797233_5798585_5798793_5801949_5802095_5804729_5804842_5808200_5808328_5809517_5809612_5810338_5810451_5810952
WTC11_00067413	chr4	+	523	2	FSM	ENSG00000072840.13	ENST00000514919.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTGACTCACATCCCCA	5752663	False	NA	NA	False	NA	NA	NA	5752674	5753929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5753053_5753784
WTC11_00067416	chr4	+	3257	8	FSM	ENSG00000109501.15	ENST00000503569.5	3255	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	47	junction_1	59.1097215665365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCATTTCTTATTTGT	6267565	True	NA	14	True	TTTAAA	-29	NA	6269846	6302883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277454_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
WTC11_00067417	chr4	+	3643	8	FSM	ENSG00000109501.15	ENST00000226760.5	3640	8	-3	0	-2	0	multi-exon	FALSE	canonical	3	136	junction_1	29.8219204407682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTTTCCTTCCTTTCTTT	6267565	True	NA	32	True	AATAAA	-21	NA	6269846	6303265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
WTC11_00067419	chr4	+	3665	8	FSM	ENSG00000109501.15	ENST00000682275.1	3662	8	-3	0	-2	0	multi-exon	FALSE	canonical	3	4	junction_6	75.4769866264154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAACCTGCAGCGCTT	6267565	True	NA	18	True	AATAAA	-7	NA	6269846	6303251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295004_6295190_6300656
WTC11_00067422	chr4	+	1948	3	FSM	ENSG00000179010.16	ENST00000320912.8	2049	3	101	0	101	0	multi-exon	FALSE	canonical	3	348	junction_1	213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	NA	False	NA	20	True	AATAAA	-21	NA	6640191	6642729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6640709_6640827_6641259_6641729
WTC11_00067423	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6627064	True	NA	20	True	AATAAA	-21	NA	6640684	6642729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6641259_6641729
WTC11_00067424	chr4	+	2315	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	-4	0	-4	0	multi-exon	FALSE	canonical	3	33	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	6673253	True	NA	9	True	AATAAA	-16	NA	6673446	6676047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674707_6674992
WTC11_00067425	chr4	+	2045	1	FSM	ENSG00000170846.17	ENST00000635031.1	2045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGTAAGGTAAATAAAC	6673883	False	NA	-25	True	NA	NA	NA	6673968	6676013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674000_6676000
WTC11_00067426	chr4	+	1605	2	FSM	ENSG00000170846.17	ENST00000444232.3	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	6672825	True	NA	9	True	AATAAA	-16	NA	6674087	6676047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674638_6674992
WTC11_00067427	chr4	+	1502	1	FSM	ENSG00000186222.5	ENST00000320776.5	1491	1	-25	14	-25	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTCTGAAAAGAGCTT	6711313	True	NA	26	True	AATAGA	-25	NA	6716148	6717650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6716100_6717600
WTC11_00067428	chr4	+	689	2	FSM	ENSG00000170871.12	ENST00000508423.1	700	2	11	0	11	0	multi-exon	FALSE	canonical	3	20	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTACATATTTTAAGTG	6780721	True	NA	NA	False	NA	NA	NA	6782652	6824684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6782842_6824184
WTC11_00067429	chr4	+	7041	10	NNC	ENSG00000170871.12	novel	7771	9	NA	NA	0	-796	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	10.275224908175	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTGTTTTTATTTCT	6780800	True	NA	2	True	AATAAA	-14	NA	6782731	6883368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6866191_6866264_6871573_6871683_6876659_6876758_6880786
WTC11_00067430	chr4	+	7765	9	FSM	ENSG00000170871.12	ENST00000425103.5	7771	9	0	6	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.78251675311019	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAACATAAGTTCCAT	6780800	True	NA	9	True	AATAAA	-16	NA	6782731	6884164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
WTC11_00067431	chr4	+	4885	14	FSM	ENSG00000132405.19	ENST00000448507.5	4887	14	0	2	0	-1	multi-exon	FALSE	canonical	3	23	junction_1	81.3505818034715	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACCATCGTTTGTT	NA	False	NA	21	True	AATAAA	-22	NA	6909443	7033116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6909506_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
WTC11_00067432	chr4	+	4947	14	FSM	ENSG00000132405.19	ENST00000409757.9	4947	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	69.5638993636395	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6907832	True	NA	19	True	AATAAA	-20	NA	6909825	7033114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6909952_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
WTC11_00067433	chr4	+	4117	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	32	0	32	0	multi-exon	FALSE	canonical	3	176	junction_1	29.7713046155589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6987180	False	NA	19	True	AATAAA	-20	NA	6987193	7033114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
WTC11_00067435	chr4	+	4369	2	FSM	ENSG00000173011.12	ENST00000310074.8	4369	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCACCGCTTGCTTCT	7042543	True	NA	NA	False	ATTAAA	-17	NA	7043371	7057952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_7043850_7054061
WTC11_00067436	chr4	+	4918	1	FSM	ENSG00000173011.12	ENST00000515646.1	3818	1	44	-1144	44	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTAAGCAAACT	7052853	False	NA	NA	False	NA	NA	NA	7052867	7057785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_7052900_7057800
WTC11_00067438	chr4	+	986	1	FSM	ENSG00000228919.5	ENST00000623059.1	1295	1	-108	417	-108	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCCGCCCGCCGCCCGCC	NA	False	NA	NA	False	GGGGCT	-33	NA	7938892	7939878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_7938900_7939900
WTC11_00067439	chr4	+	539	1	FSM	ENSG00000250471.2	ENST00000514075.2	579	1	75	-35	75	35	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAAAGAAAAGAAAAGGCA	NA	False	NA	NA	False	AATAAA	-32	NA	8174495	8175034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8174500_8175000
WTC11_00067441	chr4	+	2874	11	FSM	ENSG00000155275.19	ENST00000389737.5	2874	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	11.040380428228	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	8439364	True	NA	16	True	AATAAA	-20	NA	8440776	8476555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
WTC11_00067442	chr4	+	2333	11	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	14.5657131648265	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGAATTAAGCTCTTTA	8439381	True	NA	20	True	AATAAA	-27	NA	8440793	8493525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8493265
WTC11_00067443	chr4	+	442	2	FSM	ENSG00000155275.19	ENST00000531038.5	541	2	93	6	93	-6	multi-exon	FALSE	canonical	3	14	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGAATTAAGCTCTTTA	NA	False	NA	20	True	AATAAA	-27	NA	8471018	8493525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8471201_8493265
WTC11_00067444	chr4	+	2159	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	-23	0	7	0	multi-exon	FALSE	canonical	3	7	junction_1	32.5113465473362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	8591428	True	NA	8	True	ATTAAA	-15	NA	8592732	8619749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
WTC11_00067445	chr4	+	2177	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	-14	0	-5	0	multi-exon	FALSE	canonical	3	61	junction_2	20.3656573672445	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	8591446	True	NA	11	True	ATTAAA	-18	NA	8592750	8619752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
WTC11_00067446	chr4	+	2491	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	-22	-5	-4	-3	multi-exon	FALSE	canonical	2	2	junction_2	32.1323824202315	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGAGAGGATCTGTGT	8591399	True	NA	15	True	ATTAAA	-22	NA	8592703	8619756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
WTC11_00067447	chr4	+	441	3	FSM	ENSG00000249272.1	ENST00000511903.1	705	3	264	0	264	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCGCCTGGTCCCCGGA	NA	False	NA	NA	False	NA	NA	NA	8959891	8963981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8959902_8961713_8961833_8963669
WTC11_00067448	chr4	+	1032	1	FSM	ENSG00000250896.1	ENST00000507437.1	918	1	-114	0	-114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCACTGAAGCTCTCG	NA	False	NA	NA	False	NA	NA	NA	11371860	11372892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_11371900_11372900
WTC11_00067449	chr4	+	354	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACAAAAGGGGCAACA	NA	False	NA	NA	False	AATAAA	-36	NA	11373397	11373751	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_11373400_11373800
WTC11_00067450	chr4	+	1247	1	FSM	ENSG00000205940.8	ENST00000507090.2	2176	1	67	862	67	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCACAAGGACTCCACTA	NA	False	NA	NA	False	AAGAAA	-36	NA	13336548	13337795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_13336500_13337800
WTC11_00067451	chr4	+	5201	37	FSM	ENSG00000048342.18	ENST00000424120.6	5184	37	-17	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.64402312597954	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAAGTGTTCTATTT	15469726	True	NA	15	True	AATAAA	-20	NA	15469864	15601552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
WTC11_00067452	chr4	+	1087	8	FSM	ENSG00000048342.18	ENST00000514450.3	1121	8	0	34	0	-34	multi-exon	FALSE	canonical	2	7	junction_2	15.6021976474012	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATTTTTCTTTTGTGG	15469782	False	NA	-25	True	ATTAAA	-3	NA	15469920	15511638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
WTC11_00067453	chr4	+	1298	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	-544	0	-2	multi-exon	FALSE	canonical	3	26	junction_2	7.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTCATATGGCTGT	15478520	True	NA	NA	False	AATAAA	-12	NA	15479215	15482257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15479329_15480703_15480828_15481196
WTC11_00067454	chr4	+	4993	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	-4	0	-4	0	multi-exon	FALSE	canonical	3	17	junction_30	7.67872403255685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	15478504	True	NA	12	True	AATAAA	-17	NA	15479199	15601549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
WTC11_00067455	chr4	+	969	7	FSM	ENSG00000048342.18	ENST00000514039.6	969	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	11.9675487140108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCACTGTACTTTCT	NA	False	NA	NA	False	NA	NA	NA	15579967	15601425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15597406_15597466_15599528_15599707_15601236
WTC11_00067457	chr4	+	2533	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	-127	-1828	-10	0	multi-exon	FALSE	canonical	3	75	junction_3	13.7679176187089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	15681693	False	NA	4	True	AATAAA	-15	NA	15681707	15690447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
WTC11_00067458	chr4	+	612	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	-24	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	15681718	False	NA	-29	True	AATGAA	-2	NA	15681732	15686568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15684849_15684960_15686235
WTC11_00067459	chr4	+	660	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	-21	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15681718	False	NA	9	True	AATAAA	-16	NA	15681732	15686606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15682022_15686235
WTC11_00067460	chr4	+	1051	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	-24	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	15681718	False	NA	NA	False	AATATA	-25	NA	15681732	15687050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681969_15686235
WTC11_00067467	chr4	+	4291	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	-4	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	15679008	True	NA	4	True	AATAAA	-15	NA	15681822	15690447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15686235
WTC11_00067468	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	11.2249721603218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	15679046	True	NA	8	True	AATAAA	-14	NA	15681860	15688972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
WTC11_00067469	chr4	+	1870	9	FSM	ENSG00000109743.11	ENST00000265016.9	1979	9	50	59	19	-59	multi-exon	FALSE	canonical	3	11	junction_1	3.64005494464026	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGAGACTGGGTAATTT	15702906	True	NA	NA	False	TATAAA	-5	NA	15703114	15732728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15703333_15705514_15705642_15707510_15707647_15711806_15711890_15715284_15715362_15715706_15715800_15718906_15718994_15722874_15722935_15731739
WTC11_00067470	chr4	+	353	1	NIC	ENSG00000263327.6	novel	1031	3	NA	NA	29202	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGGGTTTGTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	16256246	16256599	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_16256200_16256600
WTC11_00067471	chr4	+	2217	13	FSM	ENSG00000002549.13	ENST00000226299.9	2209	13	-8	0	-8	0	multi-exon	FALSE	canonical	3	388	junction_5	34.2474654374435	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTGGCTCTGATATT	17577160	False	NA	8	True	AATAAA	-18	NA	17577189	17607970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
WTC11_00067475	chr4	+	1579	8	FSM	ENSG00000002549.13	ENST00000503467.1	1709	8	130	0	130	0	multi-exon	FALSE	canonical	1	5	junction_1	167.151648120465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGGCTCTGATATTTA	17585878	False	NA	10	True	AATAAA	-20	NA	17585898	17607972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17586239_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
WTC11_00067476	chr4	+	10869	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	836	junction_3	51.0511725842044	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	17603726	True	NA	17	True	AATAAA	-30	NA	17614629	17634105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
WTC11_00067477	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_8	45.1290095171609	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	17803089	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
WTC11_00067478	chr4	+	747	3	FSM	ENSG00000109805.10	ENST00000513226.1	795	3	0	48	0	-48	multi-exon	FALSE	canonical	3	422	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTTAAAAAAAAAAGTCAG	17803138	True	NA	NA	False	ATTAAA	-28	NA	17811027	17813298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17811189_17812220_17812425_17812916
WTC11_00067481	chr4	+	449	1	FSM	ENSG00000241612.1	ENST00000488289.1	483	1	-8	42	-8	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCTGCTGGAACCTAT	NA	False	NA	NA	False	NA	NA	NA	19813740	19814189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_19813700_19814200
WTC11_00067482	chr4	+	739	4	FSM	ENSG00000145147.20	ENST00000509941.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTAGTCCCACAATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	20553852	20569264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20553969_20567261_20567387_20567517_20567616_20568864
WTC11_00067483	chr4	+	900	3	FSM	ENSG00000145147.20	ENST00000508541.1	2947	3	2047	0	2047	0	multi-exon	FALSE	canonical	3	22	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGC	NA	False	NA	NA	False	AATAAA	-21	NA	20616909	20619166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20617199_20617438_20617651_20618767
WTC11_00067484	chr4	+	1732	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	-12	0	-3	0	multi-exon	TRUE	canonical	3	10	junction_3	5.67890834580027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	20699766	True	NA	-26	True	NA	NA	NA	20700423	20728321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
WTC11_00067485	chr4	+	2061	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	12	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_4	5.08298482133063	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	20699767	True	NA	10	True	ATTAAA	-22	NA	20700424	20728357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
WTC11_00067486	chr4	+	3369	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	-27	2967	4	1233	multi-exon	TRUE	canonical	3	5	junction_8	6.50840802347241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTCCTTAAAGTATATA	20699773	True	NA	NA	False	NA	NA	NA	20700430	20729590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
WTC11_00067491	chr4	+	3595	2	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCGGTGCACTTGAA	24501216	False	NA	12	True	AATAAA	-18	NA	24501234	24508372	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24503560_24507102
WTC11_00067494	chr4	+	4494	10	FSM	ENSG00000038210.14	ENST00000264864.8	3594	10	-82	-818	-82	818	multi-exon	FALSE	canonical	3	182	junction_1	11.8602979164381	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGCCACGTTCTTTGATC	25230914	True	NA	10	True	ATTAAA	-18	NA	25233950	25280022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259036_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
WTC11_00067498	chr4	+	591	8	FSM	ENSG00000053900.11	ENST00000505080.1	569	8	-22	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	108.584961562599	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTATGGAATGTTTAAAA	25372216	True	NA	NA	False	NA	NA	NA	25377292	25390183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25377345_25377417_25377557_25380373_25380446_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135
WTC11_00067499	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.9432773858019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372216	True	NA	9	True	AATAAA	-12	NA	25377292	25418489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
WTC11_00067500	chr4	+	595	6	FSM	ENSG00000053900.11	ENST00000505991.1	595	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	26.6953179415417	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTAAGCTCTTGGGA	25372243	True	NA	NA	False	AAGAAA	-10	NA	25377319	25388854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837
WTC11_00067501	chr4	+	2636	28	NIC	ENSG00000053900.11	novel	2635	29	NA	NA	6	0	intron_retention	FALSE	canonical	3	236	junction_8	31.6619662961631	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372249	True	NA	9	True	AATAAA	-12	NA	25377325	25418489	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
WTC11_00067502	chr4	+	435	2	FSM	ENSG00000053900.11	ENST00000507809.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGCCTTAAAATA	25372280	True	NA	NA	False	TATAAA	-21	NA	25377356	25380608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25377557_25380373
WTC11_00067505	chr4	+	3807	8	FSM	ENSG00000053900.11	ENST00000504256.5	3807	8	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	24.1272138669095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCTTCATCTTCTCT	25405586	False	NA	18	True	AATAAA	-21	NA	25405600	25418498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25414505_25414598_25414701_25415465_25417740_25418154
WTC11_00067522	chr4	+	5398	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	-3	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	274.839389462282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	26313444	True	NA	21	True	AATAAA	-29	NA	26321010	26434923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
WTC11_00067524	chr4	+	2075	1	Genic_Genomic	ENSG00000168214.22	novel	NA	NA	NA	NA	552	-22336	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCATTGGTAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	26343734	26345809	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_26343700_26345800
WTC11_00067526	chr4	+	5761	11	FSM	ENSG00000168214.22	ENST00000342320.8	5761	11	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	262.027174163292	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAATGGGCTTTGTCA	NA	False	NA	NA	False	TTTAAA	-24	NA	26362435	26435131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
WTC11_00067528	chr4	+	726	5	FSM	ENSG00000168214.22	ENST00000511451.5	742	5	0	16	0	-16	multi-exon	FALSE	canonical	3	540	junction_1	321.644990634084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTACTAATATTTTTGT	26362448	True	NA	NA	False	ATTAAA	-26	NA	26362475	26420822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550
WTC11_00067531	chr4	+	860	2	FSM	ENSG00000168214.22	ENST00000505727.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	1562	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCCACAGTAAAAAAAAAA	26430104	False	NA	NA	False	NA	NA	NA	26430145	26431174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26430523_26430691
WTC11_00067534	chr4	+	6080	13	FSM	ENSG00000109689.19	ENST00000465503.6	3613	13	-143	-2324	-96	909	multi-exon	FALSE	canonical	3	50	junction_9	51.2940867287189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTAGTGAATTGTTT	26859621	True	NA	NA	False	NA	NA	NA	26860697	27026290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27007982_27008007_27008427_27008529_27008763_27009003_27017710_27017985_27022518
WTC11_00067536	chr4	+	5613	12	FSM	ENSG00000109689.19	ENST00000467087.7	5004	12	504	-1113	-114	1113	multi-exon	FALSE	canonical	3	115	junction_8	32.0098125451174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTCTTATTGATCTC	26861332	False	NA	NA	False	AGTAAA	-22	NA	26861344	27026494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27008427_27008529_27008763_27009003_27017710_27017985_27022518
WTC11_00067540	chr4	+	1415	9	FSM	ENSG00000169299.14	ENST00000515668.5	1415	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	102.79713031014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAAAGGTTTGGATT	37823493	True	NA	NA	False	NA	NA	NA	37826707	37847336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839516_37839684_37839847_37839932_37840065_37840260_37845632_37845731_37846930
WTC11_00067541	chr4	+	1608	11	FSM	ENSG00000169299.14	ENST00000505986.5	1646	11	-11	49	0	-49	multi-exon	FALSE	canonical	2	4	junction_4	83.322505963275	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCAAAATTGACATCTC	37823493	True	NA	NA	False	NA	NA	NA	37826707	37847429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839516_37839684_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201
WTC11_00067544	chr4	+	5715	20	FSM	ENSG00000065882.17	ENST00000261439.9	5703	20	-14	2	-14	-2	multi-exon	FALSE	canonical	2	22	junction_2	87.0330914237228	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATGGTGGTTTTTT	37890380	True	NA	8	True	AATAAA	-22	NA	37891069	38139171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00067546	chr4	+	3746	20	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	84.0775924443995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGGTTCCTTTTTG	37972070	True	NA	14	True	AATAAA	-14	NA	37977317	38137617	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00067547	chr4	+	3724	20	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	112.983856371404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGGTTCCTTTTTG	37972101	True	NA	14	True	AATAAA	-14	NA	37977348	38137617	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38053105_38053226_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00067548	chr4	+	5154	19	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_1	38.6342856112464	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGTGGTTTTTTTT	37972056	True	NA	10	True	AATAAA	-24	NA	37977303	38139173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00067552	chr4	+	5548	6	FSM	ENSG00000109787.13	ENST00000261438.10	5594	6	-2	48	0	-48	multi-exon	FALSE	canonical	3	95	junction_4	5.86515131944607	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACAGAACAATAACGCAT	38663172	True	NA	NA	False	AGTAAA	-36	NA	38664196	38701469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728_38689880_38694745_38694907_38697081
WTC11_00067556	chr4	+	4060	15	FSM	ENSG00000197712.12	ENST00000358869.5	4060	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	13.1918728846241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	38867086	True	NA	3	True	ATTAAA	-15	NA	38867805	38945739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_38867835_38868397_38868547_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
WTC11_00067558	chr4	+	2947	11	FSM	ENSG00000109790.18	ENST00000508137.6	2926	11	-21	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	18.5677139142114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATGTCTAAGATGCT	39043346	False	NA	10	True	GATAAA	-19	NA	39045038	39122208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
WTC11_00067560	chr4	+	7600	11	FSM	ENSG00000109790.18	ENST00000504108.7	7718	11	0	118	0	-118	multi-exon	FALSE	canonical	3	16	junction_1	36.5704798984099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTTCTGAAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	39062231	39126115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
WTC11_00067567	chr4	+	1670	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	-92	0	-33	0	multi-exon	TRUE	canonical	3	6	junction_6	35.1297418924776	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	NA	False	NA	10	True	ATTAAA	-25	NA	39458970	39477648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
WTC11_00067570	chr4	+	2009	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	-12	1575	-1	283	multi-exon	FALSE	canonical	3	71	junction_7	16.6279884532074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTCCAGCCTGGGCG	39457719	True	NA	NA	False	NA	NA	NA	39459043	39477931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
WTC11_00067571	chr4	+	357	1	FSM	ENSG00000224097.5	ENST00000507033.1	982	1	114	511	114	-511	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGACTGCTAGCTCACT	NA	False	NA	NA	False	AAAACA	-10	NA	39480598	39480955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39480600_39481000
WTC11_00067573	chr4	+	5164	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	-101	-2801	-71	1	multi-exon	FALSE	canonical	0	0	junction_2	410.814502611039	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATATCTTATTTCTGG	39698026	False	NA	30	True	AATAAA	-26	NA	39698037	39782793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
WTC11_00067574	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	378.234963349503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	39664897	True	NA	98	True	AAGAAA	-7	NA	39698162	39778710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
WTC11_00067576	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	326.865245764809	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	39664870	True	NA	29	True	AATAAA	-25	NA	39698135	39782792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
WTC11_00067577	chr4	+	2188	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.519769223246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	39664897	True	NA	-3	True	AATAAA	-5	NA	39698162	39779983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
WTC11_00067581	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	25.7281502689753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	40051149	True	NA	6	True	AATAAA	-15	NA	40056849	40158252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
WTC11_00067587	chr4	+	4657	2	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-54	20588	-15	-20588	5prime_fragment	FALSE	canonical	3	189	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATATAAGATCTTTCA	40749849	False	NA	NA	False	NA	NA	NA	40749909	40754868	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_40750301_40750602
WTC11_00067588	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	55.8798888999529	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	40746765	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
WTC11_00067589	chr4	+	1768	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	-9	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	19.8131269616888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	40746765	True	NA	NA	False	AATAAA	-7	NA	40749954	40775456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
WTC11_00067590	chr4	+	1543	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	221	10371	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	61.0379607544455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGATGCCCAACTCTGTT	40749466	True	NA	17	True	ATTAAA	-19	NA	40750184	40786847	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786547
WTC11_00067592	chr4	+	1157	9	FSM	ENSG00000154277.13	ENST00000284440.9	1103	9	-81	27	-61	0	multi-exon	FALSE	canonical	3	1790	junction_2	268.983619389732	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGCTGATTCTCATT	41256833	False	NA	28	True	AATAAA	-20	NA	41256846	41268428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
WTC11_00067593	chr4	+	1578	8	FSM	ENSG00000154277.13	ENST00000381760.8	1578	8	0	0	0	0	multi-exon	FALSE	canonical	3	2298	junction_1	112.679969427597	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGCTGATTCTCATT	41256556	False	NA	28	True	AATAAA	-20	NA	41256907	41268428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41257010_41257114_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
WTC11_00067594	chr4	+	1083	8	NIC	ENSG00000154277.13	novel	1103	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	890.309554054553	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	41256558	False	NA	29	True	AATAAA	-21	NA	41256909	41268429	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_41257010_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
WTC11_00067597	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	25.1440295541948	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	41935393	False	NA	19	True	AAAAAG	-29	NA	41935428	41960803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
WTC11_00067609	chr4	+	5314	6	FSM	ENSG00000163293.12	ENST00000295461.10	5302	6	-12	0	-12	0	multi-exon	TRUE	canonical	3	22	junction_4	2.41660919471891	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGTTCAGTTTTTAG	48016237	True	NA	8	True	AATAAA	-17	NA	48016759	48040173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48016886_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
WTC11_00067611	chr4	+	2139	3	FSM	ENSG00000145248.7	ENST00000273861.5	2120	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	44	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCATGTTCTTTTCGAC	48483081	True	NA	NA	False	AATGAA	-23	NA	48483323	48489526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48484152_48484931_48485143_48488426
WTC11_00067616	chr4	+	1596	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	-2	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	267.11596264544	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	48816416	True	NA	28	True	ATTAAA	-25	NA	48831081	48861200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
WTC11_00067617	chr4	+	1964	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	-6	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	96.623544620346	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	48816416	True	NA	NA	False	AATAAA	-17	NA	48831081	48861815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
WTC11_00067622	chr4	+	1423	9	FSM	ENSG00000109180.15	ENST00000508293.5	1423	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308.58750784826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGGCAAATAAAATGTAA	48831011	False	NA	-17	True	ATTAAA	-41	NA	48831305	48861216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831532_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
WTC11_00067623	chr4	+	1916	2	FSM	ENSG00000109180.15	ENST00000502972.1	1916	2	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCTCATCTTCCTTG	48855961	False	NA	13	True	AATAAA	-17	NA	48855971	48861246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48857366_48860724
WTC11_00067627	chr4	+	4244	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	-22	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	47.7246267664819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840152	True	NA	11	True	AATAAA	-25	NA	51843130	51916837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
WTC11_00067629	chr4	+	3563	4	FSM	ENSG00000109184.15	ENST00000508257.5	835	4	9	-2737	9	2	multi-exon	FALSE	canonical	1	4	junction_1	123.312610871719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTAAATTTTTTCTTC	NA	False	NA	13	True	AATAAA	-27	NA	51909408	51916839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51909453_51911069_51911175_51913289_51913393_51913528
WTC11_00067632	chr4	+	937	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	50	0	-30	0	multi-exon	FALSE	canonical	3	1745	junction_1	713.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	31	True	AATAAA	-19	NA	52712374	52714141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493
WTC11_00067633	chr4	+	2566	5	FSM	ENSG00000226950.8	ENST00000675988.1	1644	5	-127	-795	-28	214	multi-exon	FALSE	canonical	2	6	junction_4	1283.51945349496	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTACTGCACCCCCT	NA	False	NA	NA	False	NA	NA	NA	52712376	52721897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713703_52714198_52714239_52719867
WTC11_00067634	chr4	+	6059	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	6	0	-6	multi-exon	FALSE	canonical	3	1745	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATCATTTGACTGGAC	52692817	True	NA	NA	False	ATTAAA	-12	NA	52712404	52718759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823
WTC11_00067635	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1312.745096163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	52692866	True	NA	NA	False	NA	NA	NA	52712453	52721683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
WTC11_00067636	chr4	+	1062	2	FSM	ENSG00000226950.8	ENST00000425653.2	1059	2	0	-3	0	0	multi-exon	FALSE	canonical	3	3172	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	52692958	True	NA	31	True	AATAAA	-19	NA	52712545	52714141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712960_52713493
WTC11_00067637	chr4	+	1986	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	290	junction_3	2.86744175568088	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	52862285	False	NA	29	True	AATAAA	-17	NA	52862298	52866835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
WTC11_00067638	chr4	+	2125	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_8	103.282058431027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370011	True	NA	29	True	AATAAA	-30	NA	53377625	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067639	chr4	+	2199	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	-19	0	-15	0	multi-exon	FALSE	canonical	3	142	junction_13	115.019751575958	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370011	True	NA	76	True	AATAAA	-19	NA	53377625	53459668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067640	chr4	+	3411	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	-15	0	-15	0	multi-exon	FALSE	canonical	3	142	junction_1	113.958469943977	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	53370011	True	NA	26	True	TATAAA	-36	NA	53377625	53460862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067642	chr4	+	2089	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	1	-13	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	105.596445844545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGACTTTATATCCAA	53370057	True	NA	63	True	AATAAA	-6	NA	53377671	53459655	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067643	chr4	+	1969	16	NNC	ENSG00000145216.16	novel	2180	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	133.749849428783	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCCAAGAAAGGAATGT	53370056	True	NA	74	True	AATAAA	-17	NA	53377670	53459666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399735_53399840_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067644	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	95.2078285239449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370081	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067645	chr4	+	1904	16	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_11	112.220299213447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370082	True	NA	29	True	AATAAA	-30	NA	53377696	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00067654	chr4	+	5132	21	FSM	ENSG00000157404.17	ENST00000686011.1	5135	21	15	-12	0	0	multi-exon	FALSE	canonical	3	52	junction_14	23.0978353964176	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54654059	True	NA	19	True	AATAAA	-20	NA	54657956	54740715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726039_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731330_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
WTC11_00067655	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	28.2935946814822	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54654059	True	NA	19	True	AATAAA	-20	NA	54657956	54740715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
WTC11_00067656	chr4	+	703	4	FSM	ENSG00000157404.17	ENST00000512959.1	746	4	43	0	43	0	multi-exon	FALSE	canonical	3	75	junction_1	40.3099105542159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTAATTTTGGGGCATG	54729323	False	NA	NA	False	AATAGA	-15	NA	54729334	54733401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54729486_54731327_54731420_54731870_54731999_54733069
WTC11_00067660	chr4	+	828	3	FSM	ENSG00000134851.13	ENST00000506198.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTTCTCTCCAACAT	55386327	True	NA	23	True	AAGAAA	-19	NA	55395956	55425657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55396397_55424537_55424644_55425375
WTC11_00067661	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	59.7742419441686	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	55386327	True	NA	20	True	AATAAA	-17	NA	55395956	55426175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
WTC11_00067662	chr4	+	1786	2	FSM	ENSG00000134851.13	ENST00000515591.1	1786	2	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAACCTGACTTCTAA	55423100	False	NA	-3	True	NA	NA	NA	55423113	55425631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55424644_55425375
WTC11_00067663	chr4	+	865	1	FSM	ENSG00000272969.1	ENST00000609234.1	778	1	-97	10	-97	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAAATGCACTTTTC	55546995	True	NA	NA	False	AATAAA	-14	NA	55547014	55547879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55547000_55547900
WTC11_00067666	chr4	+	1584	9	NNC	ENSG00000090989.18	novel	3592	19	NA	NA	6	6470	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_8	39.3634903813165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTCAATTTCTTTTA	55851361	True	NA	NA	False	AATAAA	-23	NA	55853680	55875223	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55874996
WTC11_00067667	chr4	+	3244	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	4	0	-4	multi-exon	FALSE	canonical	3	16	junction_10	34.1781410951462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGGTCTATCATATGC	55851419	True	NA	23	True	AATAAA	-40	NA	55853738	55905030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
WTC11_00067668	chr4	+	2097	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	-6	1	-6	-1	multi-exon	FALSE	canonical	3	28	junction_2	5.09901951359278	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	55947242	True	NA	NA	False	NA	NA	NA	55948864	55960924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
WTC11_00067670	chr4	+	7168	10	NIC	ENSG00000109265.15	novel	7044	11	NA	NA	-260	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	9.007541422005	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGCACTGATGGAATT	NA	False	NA	5	True	AATAAA	-15	NA	56048837	56330609	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_56049300_56179283_56179431_56272320_56272493_56307534_56307700_56310665_56310735_56313196_56313380_56314039_56316690_56323376_56323568_56324103_56324267_56327643
WTC11_00067677	chr4	+	6371	9	FSM	ENSG00000128050.9	ENST00000512576.3	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	2815	junction_3	300.624662161972	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTTTGTTGTCAG	56376163	True	NA	4	True	AATAAA	-14	NA	56436259	56464578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
WTC11_00067686	chr4	+	7538	4	NIC	ENSG00000084093.19	novel	7069	5	NA	NA	403	0	intron_retention	FALSE	canonical	3	75	junction_1	112.038683795672	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	56908452	False	NA	5	True	AATAAA	-14	NA	56908496	56935844	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_56909040_56910629_56911537_56919786_56919871_56929840
WTC11_00067687	chr4	+	8092	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	-721	0	375	0	multi-exon	TRUE	canonical	3	10	junction_1	142.460130874883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	56908385	True	NA	-17	True	NA	NA	NA	56908468	56935822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
WTC11_00067690	chr4	+	4130	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	-20	-2	0	2	multi-exon	FALSE	canonical	3	10	junction_1	106.35101127869	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGATCTTTATTTTG	56977366	True	NA	18	True	AATAAA	-18	NA	56977721	57031160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
WTC11_00067691	chr4	+	3666	24	FSM	ENSG00000047315.17	ENST00000431623.6	3666	24	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	111.637951146131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56974174	True	NA	16	True	AATAAA	-16	NA	56978863	57031158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56979005_56986353_56986427_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
WTC11_00067692	chr4	+	531	4	FSM	ENSG00000047315.17	ENST00000433463.1	539	4	0	8	0	-8	multi-exon	FALSE	canonical	2	7	junction_1	202.518037605433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATAGTTCTAATAGTT	56974206	True	NA	NA	False	NA	NA	NA	56978895	56990898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56979005_56985259_56985458_56986353_56986427_56990747
WTC11_00067711	chr4	+	4433	18	FSM	ENSG00000018189.13	ENST00000381006.8	4433	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	30.9406173065108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGATTGATGATTGT	NA	False	NA	9	True	AATAAA	-20	NA	70721963	70808619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70722752_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793784_70793905_70794794_70794895_70800140_70800206_70802955_70802984_70804347_70804417_70806515
WTC11_00067717	chr4	+	6998	6	FSM	ENSG00000173542.9	ENST00000309395.7	6930	6	-68	0	-25	0	multi-exon	FALSE	canonical	3	52	junction_5	10.8554133960895	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTTGCATTACTGT	70899088	True	NA	8	True	AATAAA	-21	NA	70902300	70988168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
WTC11_00067718	chr4	+	1107	7	FSM	ENSG00000173542.9	ENST00000396051.2	1107	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	27.1641103091725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTCTCTATACACTTGA	70899165	True	NA	NA	False	NA	NA	NA	70902377	70982242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70902551_70950699_70950812_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
WTC11_00067723	chr4	+	1969	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0332779621949	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	72031423	True	NA	5	True	TATAAA	-42	NA	72031994	72148305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
WTC11_00067724	chr4	+	336	1	FSM	ENSG00000248641.1	ENST00000430198.2	324	1	30	-42	30	42	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACTGGACAGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	73098851	73099187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_73098900_73099200
WTC11_00067731	chr4	+	2365	8	FSM	ENSG00000163738.19	ENST00000395759.6	2354	8	-7	-4	-3	-3	multi-exon	FALSE	canonical	3	9	junction_7	7.34569150410425	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTATTCTTTTTTTC	74156414	True	NA	NA	False	AATAAA	-14	NA	74158104	74303096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
WTC11_00067733	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	5.76085931090146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
WTC11_00067741	chr4	+	10112	10	NIC	ENSG00000138771.16	novel	3766	4	NA	NA	-235	1	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	30.6416967586149	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCATATTTATTCTAT	76686190	True	NA	13	True	AATAAA	-22	NA	76689335	76783254	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_76689703_76710155_76710288_76730803_76730936_76738760_76741927_76749016_76749091_76754310_76755193_76756448_76756938_76759544_76759696_76770625_76770899_76778808
WTC11_00067747	chr4	+	2731	7	FSM	ENSG00000138764.15	ENST00000395640.5	1410	7	-205	-1116	-205	995	multi-exon	FALSE	canonical	3	95	junction_6	13.9094292558042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTCAAAATAAAATTATT	77156681	False	NA	NA	False	AATAGA	-4	NA	77158091	77167179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
WTC11_00067752	chr4	+	3288	20	FSM	ENSG00000138759.20	ENST00000508900.2	3329	20	0	41	0	-41	multi-exon	FALSE	canonical	3	29	junction_3	9.71277252582929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAGAACTTCTAATAA	78056188	True	NA	NA	False	AGTAAA	-12	NA	78057322	78337996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673
WTC11_00067753	chr4	+	11473	64	FSM	ENSG00000138759.20	ENST00000682513.1	11473	64	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_21	21.0855078064481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAAATGAGTTCCTTTG	78056188	True	NA	NA	False	CATAAA	-3	NA	78057322	78512279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78466207_78466436_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273
WTC11_00067755	chr4	+	15871	74	FSM	ENSG00000138759.20	ENST00000512123.4	15871	74	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_21	26.0188233895404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	78056188	True	NA	25	True	AATAAA	-19	NA	78057322	78544269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78466207_78466436_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
WTC11_00067757	chr4	+	2923	21	NNC	ENSG00000138759.20	novel	7217	42	NA	NA	252	17161	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_20	11.710999103407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTAATGTGTTTATT	78057872	False	NA	29	True	AATAAA	-41	NA	78057941	78355198	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78354765
WTC11_00067760	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	59.7009074228143	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	78550069	True	NA	-7	True	ATTAAA	-8	NA	78551746	78610415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
WTC11_00067765	chr4	+	3038	14	FSM	ENSG00000138756.19	ENST00000502871.5	3195	14	0	157	0	-157	multi-exon	TRUE	canonical	2	45	junction_13	9.87975037415528	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATATATTTTATGTAAA	78775133	True	NA	NA	False	AATAGA	-21	NA	78776377	78879812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78776722_78826036_78826156_78833581_78833688_78842384_78842528_78844927_78845050_78847187_78847270_78850923_78851057_78859583_78859688_78861388_78861469_78865556_78865721_78870782_78871061_78871849_78871949_78872613_78872799_78878733
WTC11_00067769	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	99.9391815055537	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	82419235	True	NA	14	True	AAAACA	-24	NA	82430589	82461177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
WTC11_00067770	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	236.86418049169	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	82419293	True	NA	-12	True	NA	NA	NA	82430647	82461055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
WTC11_00067771	chr4	+	1625	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	32	32	32	0	multi-exon	FALSE	canonical	3	66	junction_2	342.399620326892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	82419339	False	NA	-12	True	NA	NA	NA	82430693	82461055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
WTC11_00067773	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	12.3592070943083	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	82899217	True	NA	9	True	ATTAAA	-18	NA	82900734	82919969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
WTC11_00067774	chr4	+	565	4	FSM	ENSG00000168152.13	ENST00000506208.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	46.4781908234628	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCATTGTTAATAAAAAG	82906411	False	NA	NA	False	NA	NA	NA	82906425	82917040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82906628_82907784_82907936_82910696_82910812_82916943
WTC11_00067776	chr4	+	1663	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	-12	0	0	0	multi-exon	FALSE	canonical	3	417	junction_9	53.6354866865098	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	83029809	True	NA	35	True	AATAAA	-44	NA	83035170	83075818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
WTC11_00067779	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_2	732.705389293678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	83438883	True	NA	25	True	AATAAA	-26	NA	83455982	83461423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
WTC11_00067780	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	916.268277064941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	83438955	True	NA	29	True	AATAAA	-40	NA	83456054	83461237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
WTC11_00067781	chr4	+	1553	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	-3	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_3	202.584895784459	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	83438955	True	NA	6	True	AATAAA	-21	NA	83456054	83462298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
WTC11_00067782	chr4	+	490	5	FSM	ENSG00000163319.11	ENST00000505719.1	490	5	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_3	815.437765865673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATTAAGCAGAT	83438990	True	NA	-70	True	NA	NA	NA	83456089	83461328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83460972_83461033_83461120
WTC11_00067785	chr4	+	4599	13	FSM	ENSG00000163624.6	ENST00000295887.6	4309	13	-290	0	-290	0	multi-exon	FALSE	canonical	3	108	junction_5	7.35224833337093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTTGTGCCAT	NA	False	NA	14	True	AATAAA	-17	NA	84582836	84651334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84583519_84604242_84604371_84609428_84609526_84617563_84617662_84619393_84619534_84631818_84631878_84633856_84633940_84635263_84635352_84638923_84638993_84640837_84640991_84643023_84643144_84645221_84645326_84648556
WTC11_00067787	chr4	+	3845	12	NIC	ENSG00000163624.6	novel	4309	13	NA	NA	202	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	34.1690014656124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTTGTGCCAT	84583386	False	NA	14	True	AATAAA	-17	NA	84583470	84651334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_84583519_84604242_84604371_84609428_84609526_84617563_84617662_84619393_84619534_84631818_84631878_84633856_84633940_84635263_84635352_84638923_84638993_84640837_84640991_84645221_84645326_84648556
WTC11_00067788	chr4	+	3193	4	FSM	ENSG00000180769.10	ENST00000652207.2	3270	4	87	-10	1	-2	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTACTGTTTTCCTGGCC	84965557	True	NA	1	True	AATAAA	-14	NA	84965650	85008741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84965859_84969724_84969877_85004229_85004328_85006006
WTC11_00067794	chr4	+	2688	3	NNC	ENSG00000172493.23	novel	1486	7	NA	NA	0	16753	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	38	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCTGTGATCTGCTTA	86926953	True	NA	50	True	NA	NA	NA	86935010	86990821	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86935241_86948497_86948572_86988437
WTC11_00067795	chr4	+	1486	7	FSM	ENSG00000172493.23	ENST00000507468.5	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	28.181948517131	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGTAAGTAAATTTGAA	86926953	True	NA	NA	False	NA	NA	NA	86935010	87091824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792
WTC11_00067797	chr4	+	9189	21	NNC	ENSG00000172493.23	novel	9261	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	30.8859191218264	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGGGTTGAATCCAT	86926953	True	NA	7	True	AATAAA	-12	NA	86935010	87141035	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86935176_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
WTC11_00067799	chr4	+	9625	20	FSM	ENSG00000172493.23	ENST00000544085.6	9625	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.1970626613302	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGGGTTGAATCCAT	87006715	False	NA	7	True	AATAAA	-12	NA	87006752	87141035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87007425_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
WTC11_00067800	chr4	+	9390	20	FSM	ENSG00000172493.23	ENST00000307808.10	9390	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_18	31.4171292622406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGGTTGAATCCATGCT	87006975	False	NA	10	True	AATAAA	-15	NA	87006987	87141038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87007425_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134473_87134695_87135579
WTC11_00067803	chr4	+	2482	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	-24	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	116.637411297944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	87419803	True	NA	2	True	AATAAA	-17	NA	87422572	87459454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
WTC11_00067806	chr4	+	1427	2	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	485	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAAAAACACATGTGCT	87920625	True	NA	NA	False	NA	NA	NA	87922149	87925305	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924129
WTC11_00067811	chr4	+	1571	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	-5	15	-5	0	multi-exon	FALSE	canonical	3	154	junction_4	106.26306978438	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	87974500	True	NA	17	True	AATAAA	-23	NA	87975661	87983411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
WTC11_00067821	chr4	+	2433	2	FSM	ENSG00000251095.8	ENST00000612706.1	2422	2	-11	0	7	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTTCATATCTGGC	89678223	True	NA	NA	False	CATAAA	-16	NA	89681511	89686704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89681685_89684444
WTC11_00067823	chr4	+	247	2	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACACATTAATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	90566655	90574568	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_90566685_90574350
WTC11_00067826	chr4	+	7350	16	FSM	ENSG00000152208.13	ENST00000282020.9	5783	16	-217	-1350	-217	1350	multi-exon	FALSE	canonical	3	25	junction_1	13.611106575963	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAATGGTACTTTGCTTCA	92300489	True	NA	NA	False	AATAAA	-22	NA	92303748	93775916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_92304745_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
WTC11_00067829	chr4	+	5352	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	-260	2	-6	0	multi-exon	FALSE	canonical	3	129	junction_1	41.8771269527262	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	94205832	True	NA	13	True	AATAAA	-16	NA	94207604	94291290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
WTC11_00067830	chr4	+	5025	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	-8	0	-8	0	multi-exon	FALSE	canonical	3	91	junction_18	48.7145537850096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	94207591	False	NA	13	True	AATAAA	-16	NA	94207602	94291290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
WTC11_00067831	chr4	+	5000	24	NIC	ENSG00000163104.18	novel	5017	24	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_1	43.0519095826719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	94205851	True	NA	15	True	AATAAA	-18	NA	94207623	94291292	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
WTC11_00067832	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	47.6989218490068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	94207790	False	NA	6	True	AATAAA	-18	NA	94207844	94290821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
WTC11_00067837	chr4	+	6065	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	-22	0	0	0	multi-exon	FALSE	canonical	3	124	junction_8	17.6231776047593	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	94448299	True	NA	12	True	AATAAA	-23	NA	94451919	94668223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
WTC11_00067844	chr4	+	3755	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	-134	-1529	0	5	multi-exon	FALSE	canonical	3	50	junction_1	28.6385817970607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCATTTGGTTTGTTTGT	98259043	True	NA	21	True	AATAAA	-21	NA	98261383	98443863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
WTC11_00067845	chr4	+	951	6	FSM	ENSG00000138698.15	ENST00000505378.5	934	6	-17	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	21.3316666015574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATGATTGCATTGTTT	98259076	True	NA	-3	True	AGTAAA	-10	NA	98261416	98392245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
WTC11_00067851	chr4	+	892	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	-17	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	45.5438250479689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	98259145	True	NA	4	True	AGTAAA	-17	NA	98261485	98392252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
WTC11_00067856	chr4	+	586	4	FSM	ENSG00000164024.12	ENST00000513097.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_3	27.1947707391615	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGTGCCTGATGCAAG	99039187	False	NA	NA	False	NA	NA	NA	99039202	99045278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_99039466_99041042_99041127_99043248_99043388_99045178
WTC11_00067861	chr4	+	4055	24	FSM	ENSG00000109320.13	ENST00000226574.9	4055	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.46587724366033	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGATCTGTGCAAA	102501291	False	NA	16	True	AATAAA	-25	NA	102501358	102617302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533844_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
WTC11_00067862	chr4	+	790	2	FSM	ENSG00000246560.3	ENST00000686558.1	509	2	0	-281	0	-16	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTCCACTGTCATTCT	102828045	True	NA	-13	True	ATTAAA	-3	NA	102828287	102844083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102828318_102843323
WTC11_00067868	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	290.788933905045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	106308581	True	NA	-37	True	AATAAA	-12	NA	106316549	106347704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
WTC11_00067872	chr4	+	5487	7	FSM	ENSG00000164022.18	ENST00000671960.1	5487	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	240.443109464357	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCTAAACACAAAATGAATT	106310410	False	NA	-75	True	NA	NA	NA	106318378	106349142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
WTC11_00067875	chr4	+	1350	7	FSM	ENSG00000138796.18	ENST00000639335.1	1327	7	-23	0	-23	0	multi-exon	FALSE	canonical	2	2	junction_3	131.77938213376	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATAGTCTGTGAAGC	107982993	True	NA	NA	False	NA	NA	NA	107989805	108034762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108023473_108023564_108027687_108027761_108033175_108033293_108034238
WTC11_00067877	chr4	+	2103	8	FSM	ENSG00000138796.18	ENST00000640201.2	2103	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	116.921742535557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATACACTCAAATGATT	107983034	True	NA	-27	True	TATAAA	-3	NA	107989846	108035120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108028070_108033175_108033293_108034238
WTC11_00067879	chr4	+	1908	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	-13	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	143.160748810559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	107983076	True	NA	-44	True	NA	NA	NA	107989888	108035022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
WTC11_00067880	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	29.4465964215956	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	107983076	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
WTC11_00067881	chr4	+	3255	3	FSM	ENSG00000138796.18	ENST00000515462.7	3325	3	0	70	0	0	multi-exon	FALSE	canonical	3	12	junction_1	188.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	108025854	False	NA	24	True	AGTAAA	-21	NA	108025864	108035171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108028070_108033175_108033293_108034238
WTC11_00067882	chr4	+	6607	2	FSM	ENSG00000138796.18	ENST00000514776.3	6677	2	0	70	0	0	multi-exon	FALSE	canonical	3	389	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	108027608	False	NA	24	True	AGTAAA	-21	NA	108027618	108035171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108033293_108034238
WTC11_00067883	chr4	+	543	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	-14	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	9656.2793171076	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	108452894	True	NA	16	True	AATAAA	-43	NA	108620575	108625255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
WTC11_00067885	chr4	+	1063	6	NIC	ENSG00000109475.17	novel	560	6	NA	NA	0	242	combination_of_known_junctions	FALSE	canonical	3	562	junction_5	9592.23916716009	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCCGTCTCTACT	108452894	True	NA	NA	False	NA	NA	NA	108620575	108630654	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
WTC11_00067886	chr4	+	461	6	NNC	ENSG00000109475.17	novel	546	5	NA	NA	0	43574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9787.44254644695	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGCTTACCTCACCATTT	108452894	True	NA	NA	False	NA	NA	NA	108620575	108673986	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625257_108673957
WTC11_00067887	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	11285.2901885596	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	108452974	True	NA	39	True	TATAAA	-25	NA	108620655	108630412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
WTC11_00067888	chr4	+	885	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	53	junction_2	1246	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	NA	False	NA	16	True	AATAAA	-15	NA	108650575	108667818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108650795_108655563_108655658_108667246
WTC11_00067891	chr4	+	5072	23	FSM	ENSG00000138802.11	ENST00000399100.6	3780	23	106	-1398	104	198	multi-exon	FALSE	canonical	3	65	junction_3	19.3476780164468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCATTTATTTAATTG	109433904	False	NA	NA	False	AAGAAA	-20	NA	109433918	109541094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
WTC11_00067892	chr4	+	5027	23	NIC	ENSG00000138802.11	novel	4066	25	NA	NA	9	61	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	24.6866310392106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTATTCTAAAACAAATG	109431245	True	NA	NA	False	AATACA	-40	NA	109433823	109540957	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
WTC11_00067893	chr4	+	5177	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	104	-198	104	198	multi-exon	FALSE	canonical	3	47	junction_4	24.6222116823112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCATTTATTTAATTG	109433904	False	NA	NA	False	AAGAAA	-20	NA	109433918	109541094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
WTC11_00067899	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	73.5746031061142	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109813084	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
WTC11_00067900	chr4	+	619	4	FSM	ENSG00000109534.17	ENST00000503671.2	1146	4	0	527	0	-527	multi-exon	FALSE	canonical	3	30	junction_1	151.561502001296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAAACTTATGATAC	109815481	False	NA	NA	False	TTTAAA	-13	NA	109815827	109819060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000
WTC11_00067904	chr4	+	2850	10	NNC	ENSG00000138660.12	novel	5915	10	NA	NA	0	372	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	98.6615364031602	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATAAGTTATTTGACT	112227910	True	NA	NA	False	AATAAA	-18	NA	112231786	112270049	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265012_112265068_112265733_112265808_112266587_112266717_112268143
WTC11_00067909	chr4	+	2123	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	-16	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	96.0167809407409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635413	True	NA	17	True	AATAAA	-17	NA	112637126	112657586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
WTC11_00067911	chr4	+	601	5	FSM	ENSG00000174720.17	ENST00000508577.5	579	5	-22	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	129.325896478625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATGAGGATGAACGCACA	112635429	True	NA	NA	False	NA	NA	NA	112637142	112646642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112637240_112637643_112637788_112644667_112644872_112646350_112646452_112646587
WTC11_00067912	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	112.186940961157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	112635742	False	NA	23	True	AATAAA	-23	NA	112637455	112657592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
WTC11_00067916	chr4	+	710	4	NNC	ENSG00000174720.17	novel	1472	3	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	165.706567964781	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112652108	True	NA	17	True	AATAAA	-17	NA	112652555	112657586	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_112652674_112653076_112653237_112654067_112654160_112657246
WTC11_00067926	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	36.3262990132493	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598168	False	NA	NA	False	AATAAA	-17	NA	114598806	114678225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
WTC11_00067932	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	309.678327731643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
WTC11_00067940	chr4	+	1297	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-311	-185651	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTATTGTGATGTACC	NA	False	NA	NA	False	AATAGA	-33	NA	118850376	118851796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118850589_118850711
WTC11_00067944	chr4	+	6072	15	ISM	ENSG00000145390.12	ENST00000692078.1	6631	19	26503	1	-424	-1	3prime_fragment	FALSE	canonical	3	30	junction_1	10.1742472017565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTGGACTTCTCTTT	NA	False	NA	2	True	GATAAA	-16	NA	119239215	119295517	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
WTC11_00067947	chr4	+	1416	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	12	10	1	0	multi-exon	TRUE	canonical	3	69	junction_7	23.5607592195158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	119451308	True	NA	58	True	AATAAA	-22	NA	119454796	119499974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
WTC11_00067948	chr4	+	1600	10	FSM	ENSG00000245958.7	ENST00000688857.1	1605	10	3	2	-1	0	multi-exon	FALSE	canonical	2	10	junction_2	41.1042036239063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	119451324	True	NA	58	True	AATAAA	-22	NA	119454812	119499974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119457970_119458171_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
WTC11_00067949	chr4	+	1506	4	FSM	ENSG00000245958.7	ENST00000692067.1	917	4	77	-666	0	579	multi-exon	FALSE	canonical	3	85	junction_1	18.1536650722535	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGGATAAGGGAGCCTT	119451350	True	NA	NA	False	NA	NA	NA	119454838	119462770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716
WTC11_00067953	chr4	+	2373	2	FSM	ENSG00000245958.7	ENST00000503038.1	2376	2	0	3	0	-2	multi-exon	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTTCTGAGAATGCAT	NA	False	NA	0	True	AATAAA	-14	NA	119548205	119552022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119550444_119551887
WTC11_00067956	chr4	+	1539	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	-10	0	-8	0	multi-exon	FALSE	canonical	3	89	junction_10	187.800037717426	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	121795963	True	NA	14	True	ATTAAA	-17	NA	121801309	121816909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
WTC11_00067963	chr4	+	13910	71	NIC	ENSG00000138688.17	novel	16162	88	NA	NA	919	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_7	23.7087816331968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	NA	False	NA	5	True	AATAAA	-19	NA	122207131	122362752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_122207266_122207540_122207639_122209158_122209338_122209817_122209925_122210886_122211096_122219339_122219568_122220332_122220471_122224497_122224678_122226706_122226836_122229120_122229241_122229930_122230212_122234772_122235024_122238091_122238351_122239515_122240354_122242997_122243069_122243853_122244028_122245019_122245141_122246151_122246299_122246682_122246811_122247157_122247358_122249484_122249683_122250361_122250574_122254194_122254347_122254804_122254956_122255130_122255284_122257254_122257496_122258700_122258844_122262763_122262984_122263441_122263601_122264251_122264428_122266782_122266959_122271017_122271725_122272159_122272406_122274342_122274437_122279774_122279982_122281535_122281775_122286540_122286786_122289086_122289193_122301299_122301398_122304797_122304984_122305876_122306046_122307948_122308161_122309265_122309465_122313627_122313688_122315461_122315689_122316731_122316863_122318146_122318271_122324426_122324537_122325229_122325321_122325854_122325918_122328103_122328358_122331325_122331542_122333628_122333810_122334343_122334441_122336191_122336354_122336880_122337021_122339206_122339409_122343409_122343611_122344381_122344562_122346622_122346761_122347521_122347780_122348566_122348718_122349157_122349316_122349449_122349643_122349856_122350075_122352903_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
WTC11_00067976	chr4	+	6900	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	-875	-3673	-674	3673	multi-exon	FALSE	canonical	3	188	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCCTCTGGCTGGGT	123397354	True	NA	NA	False	ATTAAA	-24	NA	123397510	123407433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_123398514_123401536
WTC11_00067978	chr4	+	4828	2	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGCGACAGAGCGAG	NA	False	NA	NA	False	NA	NA	NA	125548918	125553772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_125550256_125550281
WTC11_00067981	chr4	+	577	3	FSM	ENSG00000142731.11	ENST00000503914.1	571	3	-6	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	9	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGGTATTAGAAATGT	127877200	True	NA	NA	False	NA	NA	NA	127880892	127883470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127881165_127881830_127881927_127883261
WTC11_00067984	chr4	+	3559	16	NIC	ENSG00000142731.11	novel	3838	16	NA	NA	-7	7	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	48.5296701914292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTGATTCATTTAAT	127877227	True	NA	6	True	AATAAA	-19	NA	127880919	127899074	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886627_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
WTC11_00067987	chr4	+	422	3	ISM	ENSG00000164074.16	ENST00000611882.1	1493	11	-21	46276	11	-24428	5prime_fragment	FALSE	canonical	3	66	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	127965458	False	NA	6	True	AATAAA	-14	NA	127965484	127984529	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_127965607_127982938_127983048_127984338
WTC11_00067990	chr4	+	3163	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	-58	0	-58	0	multi-exon	FALSE	canonical	3	25	junction_11	43.1405544472545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	128061189	False	NA	18	True	ATTAAA	-22	NA	128061227	128123869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
WTC11_00067991	chr4	+	2922	10	FSM	ENSG00000138709.19	ENST00000648358.1	2563	10	-359	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	29.8059568161868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTAACCATTTATGCAT	128059034	True	NA	-35	True	NA	NA	NA	128061334	128108854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
WTC11_00067992	chr4	+	2174	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	-23	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	19.9654021735255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059011	True	NA	12	True	AATAAA	-19	NA	128061311	128108901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
WTC11_00067994	chr4	+	3139	9	FSM	ENSG00000138709.19	ENST00000650359.1	3139	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	31.6069612585582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTTATGCATACTAATA	128061656	False	NA	-28	True	NA	NA	NA	128061693	128108861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
WTC11_00067998	chr4	+	3563	9	FSM	ENSG00000077684.16	ENST00000511647.5	3560	9	-3	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	97.7864382212585	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGCATTACTTACA	128804559	True	NA	7	True	AATAAA	-19	NA	128809699	128864081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
WTC11_00068003	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	154.941408280679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128808281	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
WTC11_00068004	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	209.022090638765	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	128808337	True	NA	11	True	AATAAA	-19	NA	128811325	128864630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
WTC11_00068005	chr4	+	3295	9	ISM	ENSG00000077684.16	ENST00000610919.4	5644	11	59	11301	3	-158	5prime_fragment	FALSE	canonical	3	181	junction_1	160.48890148543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTACTAACTCTT	128808340	True	NA	14	True	AATAAA	-14	NA	128811328	128863923	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
WTC11_00068008	chr4	+	5348	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	-22	187	1	-187	multi-exon	FALSE	canonical	3	37	junction_1	10.3266645147405	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAATTTCCGTTAAACAG	129095568	True	NA	NA	False	AGTAAA	-29	NA	129096129	129116450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
WTC11_00068015	chr4	+	6721	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	-649	0	633	multi-exon	FALSE	canonical	3	72	junction_17	81.1238921192529	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAGGGAGAGGGAGCA	139295351	True	NA	NA	False	NA	NA	NA	139301587	139392017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
WTC11_00068019	chr4	+	1835	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	3	0	3	0	multi-exon	FALSE	canonical	3	54	junction_2	292.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	140370324	True	NA	20	True	AATAAA	-8	NA	140373538	140382545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140373718_140379120_140379193_140380961
WTC11_00068020	chr4	+	4965	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	30	0	-30	multi-exon	FALSE	canonical	3	603	junction_3	15.06283137026	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAATAAAAATTTTGTT	140370431	True	NA	NA	False	AATAGA	-30	NA	140373645	140385698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
WTC11_00068022	chr4	+	4403	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	-4	0	-4	0	multi-exon	TRUE	canonical	3	180	junction_1	25.3660698571931	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	140520853	True	NA	12	True	AATAAA	-18	NA	140524163	140553770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
WTC11_00068031	chr4	+	1398	8	NIC	ENSG00000164136.17	novel	2472	8	NA	NA	189	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	7.68778516975641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGTCCATCAGTAAAT	141637113	False	NA	9	True	AATAAA	-20	NA	141637135	141733459	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_141637225_141656185_141656308_141719377_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
WTC11_00068040	chr4	+	3913	18	NIC	ENSG00000164163.11	novel	3887	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	169.144376404314	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	145090624	True	NA	NA	False	AATAAA	-20	NA	145098281	145129524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_145098420_145104388_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
WTC11_00068044	chr4	+	839	1	FSM	ENSG00000278943.1	ENST00000624774.1	1049	1	120	90	120	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTGCATGCAACATAA	NA	False	NA	NA	False	AAGAAA	-41	NA	145377028	145377867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145377000_145377900
WTC11_00068047	chr4	+	3002	7	FSM	ENSG00000170365.10	ENST00000302085.9	3002	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	18.1628436344337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTTCCTTTATTCA	145481493	True	NA	23	True	AATAAA	-31	NA	145481852	145559176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145482039_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
WTC11_00068051	chr4	+	1013	4	FSM	ENSG00000151611.17	ENST00000506919.1	1687	4	208	466	-192	-466	multi-exon	FALSE	canonical	3	19	junction_1	10.4986771653491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGATATTCTATTT	145619098	True	NA	NA	False	NA	NA	NA	145619192	145646156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985
WTC11_00068055	chr4	+	1378	4	FSM	ENSG00000164167.12	ENST00000502781.5	1352	4	-26	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	682.830058571596	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTTTATTGCATCCTT	146159552	True	NA	14	True	ATTAAA	-15	NA	146175702	146190046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146176438_146182911_146183016_146187273_146187388_146189621
WTC11_00068056	chr4	+	2219	4	FSM	ENSG00000164167.12	ENST00000296581.11	2226	4	-12	19	3	-19	multi-exon	FALSE	canonical	3	1192	junction_1	149.962217463822	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATTATGCACTTGAAC	146159555	True	NA	NA	False	AATAAA	-3	NA	146175705	146191516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621
WTC11_00068064	chr4	+	1538	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	21	0	-21	multi-exon	FALSE	canonical	3	32	junction_4	7.63216876123687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAGCTATTTAGTTA	147731257	True	NA	NA	False	NA	NA	NA	147732062	147858467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
WTC11_00068065	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	9.75145676762755	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	147731282	True	NA	7	True	AATAAA	-14	NA	147732087	148072776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
WTC11_00068066	chr4	+	1934	13	FSM	ENSG00000071205.12	ENST00000507661.1	1934	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	6.88547182277455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTGTCTGTCCTAA	NA	False	NA	6	True	AATAAA	-13	NA	147881866	148072775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148064415_148064508_148071992
WTC11_00068067	chr4	+	702	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	-121	-5	-121	0	multi-exon	FALSE	canonical	3	84	junction_1	9067.32913021004	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTGAACATTCTTTTT	NA	False	NA	18	True	AATAAA	-21	NA	151099502	151104642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
WTC11_00068069	chr4	+	873	6	FSM	ENSG00000145425.10	ENST00000274065.9	869	6	-4	0	0	0	multi-exon	FALSE	canonical	3	18483	junction_2	870.239645155287	2480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTGAACATTCTTTTT	151081747	True	NA	18	True	AATAAA	-21	NA	151099623	151104642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
WTC11_00068074	chr4	+	3445	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	-21	0	-21	0	multi-exon	TRUE	canonical	3	115	junction_1	77.3336925279014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152779905	False	NA	NA	False	AATAAA	-21	NA	152779915	152912357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
WTC11_00068082	chr4	+	6791	12	NNC	ENSG00000137460.10	novel	6597	12	NA	NA	-468	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	12.3663098713687	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTCATCTCAGCTT	NA	False	NA	12	True	AATAAA	-17	NA	152935854	152979671	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_152936136_152942927_152943556_152953498_152953561_152954216_152954320_152960564_152960651_152960743_152960845_152962813_152962885_152963022_152963131_152964904_152964976_152967979_152968098_152972376_152972542_152974674
WTC11_00068083	chr4	+	6599	12	FSM	ENSG00000137460.10	ENST00000511601.6	6597	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	32	junction_1	5.42720420239974	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTCATCTCAGCTT	152934521	True	NA	12	True	AATAAA	-17	NA	152936320	152979671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152936410_152942927_152943556_152953498_152953561_152954216_152954320_152960564_152960651_152960743_152960845_152962813_152962885_152963022_152963131_152964904_152964976_152967979_152968098_152972376_152972542_152974674
WTC11_00068093	chr4	+	7548	13	FSM	ENSG00000109654.16	ENST00000674976.1	7548	13	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	48.8861347077744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAGAGTGAATATTTA	153202109	True	NA	7	True	AATAAA	-14	NA	153204442	153339316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153204561_153222242_153223040_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
WTC11_00068096	chr4	+	7023	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	-162	10	-133	0	multi-exon	FALSE	canonical	3	17	junction_1	34.7244168268805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	153257193	False	NA	-8	True	NA	NA	NA	153257205	153339301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
WTC11_00068097	chr4	+	790	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	-24	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153256504	True	NA	4	True	ATTAAA	-17	NA	153257378	153276268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270334_153270520_153275892
WTC11_00068098	chr4	+	8108	11	FSM	ENSG00000109654.16	ENST00000675019.1	8088	11	-20	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	37.6504980046745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	153256504	True	NA	-8	True	NA	NA	NA	153257378	153339301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153324149_153328529_153328671_153334813
WTC11_00068100	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_1	21.6578213237111	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	153337142	True	NA	31	True	AATAAA	-42	NA	153344687	153415118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
WTC11_00068104	chr4	+	5034	35	FSM	ENSG00000121210.16	ENST00000409663.7	5017	35	-17	0	-17	0	multi-exon	FALSE	canonical	3	49	junction_11	28.8901990061667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	153461255	True	NA	110	True	AATAAA	-14	NA	153466328	153636711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
WTC11_00068105	chr4	+	5059	35	FSM	ENSG00000121210.16	ENST00000409959.8	5006	35	-53	0	-39	0	multi-exon	FALSE	canonical	3	108	junction_17	22.2620637176534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	153461233	True	NA	110	True	AATAAA	-14	NA	153466306	153636711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
WTC11_00068106	chr4	+	6109	35	NNC	ENSG00000121210.16	novel	5006	35	NA	NA	-148	944	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_28	28.8118974128042	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAATGCAGGGTTTGCT	NA	False	NA	50	True	NA	NA	NA	153466197	153637655	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622900_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
WTC11_00068123	chr4	+	4399	12	FSM	ENSG00000171503.13	ENST00000682452.1	4399	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	11.0288876880837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTGGAACAAAATTTAC	158680091	False	NA	NA	False	TATAAA	-27	NA	158680101	158710741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
WTC11_00068126	chr4	+	4991	4	FSM	ENSG00000171503.13	ENST00000683209.1	6369	4	1378	0	-1234	0	multi-exon	FALSE	canonical	3	76	junction_2	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGTCTATTTTAAAAA	NA	False	NA	NA	False	TATAAA	-2	NA	158701358	158710716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158703592_158706188_158706372_158706628_158706851_158708363
WTC11_00068137	chr4	+	2522	5	NNC	ENSG00000164129.12	novel	1890	4	NA	NA	-123	469	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_3	13.0479883506999	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATGTGCACAGATAA	NA	False	NA	13	True	ATTAAA	-16	NA	163343768	163352403	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_163344001_163345713_163345754_163347451_163347523_163349297_163349338_163350264
WTC11_00068138	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	325.528501909672	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	163494429	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
WTC11_00068152	chr4	+	1765	11	FSM	ENSG00000109466.14	ENST00000509028.1	1765	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	31.2257906224967	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTTTGATTACATGA	NA	False	NA	NA	False	NA	NA	NA	165263256	165322538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165321311_165321376_165322031
WTC11_00068153	chr4	+	1833	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	-44	0	-25	0	multi-exon	FALSE	canonical	3	264	junction_1	580.526216031628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	165327626	False	NA	-26	True	ATTAAA	-39	NA	165327641	165343029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
WTC11_00068155	chr4	+	2229	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	-2	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	93.9191141355156	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	165307771	True	NA	15	True	AATAAA	-2	NA	165327666	165343164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
WTC11_00068157	chr4	+	2184	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	35	-3	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	599.12322605621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCACTTTGAGCTCTT	165307860	True	NA	28	True	ATTAAA	-36	NA	165327755	165343026	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
WTC11_00068160	chr4	+	6906	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	534	junction_2	15	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAACAGGTTTTTCCAT	166705707	True	NA	0	True	ATTAAA	-16	NA	166716456	166733589	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_166716724_166725235_166725320_166727034
WTC11_00068168	chr4	+	6149	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	486	0	0	multi-exon	FALSE	canonical	3	97	junction_6	13.9071823969567	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTGGCCTTTAATTA	169617032	True	NA	12	True	ATTAAA	-16	NA	169620577	169723187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
WTC11_00068178	chr4	+	4305	12	FSM	ENSG00000164118.13	ENST00000503780.6	4298	12	-7	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.7928294755035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	174282384	True	NA	14	True	AATAAA	-15	NA	174283903	174320328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_174283944_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
WTC11_00068181	chr4	+	4407	12	ISM	ENSG00000164118.13	ENST00000396791.7	3824	14	18	11962	0	0	intron_retention	FALSE	canonical	3	36	junction_1	24.6884722321375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTTCATGCCATTCAT	174282403	True	NA	17	True	AATAAA	-18	NA	174283922	174320331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
WTC11_00068185	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	26.3581107061944	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	176312057	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
WTC11_00068186	chr4	+	2655	4	FSM	ENSG00000129128.13	ENST00000507678.5	2655	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	22.647050335284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGTTGGTTTGTTTTT	176312082	True	NA	73	True	AATGAA	-35	NA	176319990	176328406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_176322244_176324180_176324258_176327161_176327278_176328197
WTC11_00068193	chr4	+	939	4	NNC	ENSG00000218336.9	novel	651	3	NA	NA	-35	58387	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	19.258475767539	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTATTAACATTC	182143284	True	NA	NA	False	AATAAA	-19	NA	182144654	182408703	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_182144755_182323945_182324253_182346650_182346930_182408450
WTC11_00068195	chr4	+	8453	26	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	0	-1894	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	28.1531809925628	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGATTTTTTTAAAAG	182445925	True	NA	NA	False	AATAAA	-17	NA	182448998	182801130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182449084_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
WTC11_00068208	chr4	+	2935	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	6	-2342	6	556	multi-exon	FALSE	canonical	3	51	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCATGCGTAGCATTAG	183506061	False	NA	NA	False	AATAGA	-5	NA	183506087	183512985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183506319_183510281
WTC11_00068212	chr4	+	4817	31	NNC	ENSG00000168538.16	novel	4523	30	NA	NA	-2	0	intron_retention	TRUE	canonical	3	5	junction_1	41.1008110220062	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	183655633	True	NA	16	True	AATAAA	-16	NA	183659290	183713589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_183659448_183660103_183660396_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
WTC11_00068214	chr4	+	15308	5	NIC	ENSG00000173320.12	novel	10507	4	NA	NA	-4752	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	6.04152298679729	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	NA	False	NA	16	True	ATTAAA	-16	NA	183900554	184023526	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_183906957_184001324_184001478_184009157_184011424_184011586_184011636_184017088
WTC11_00068221	chr4	+	4434	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	2049	junction_2	53.160135440008	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	185137361	True	NA	NA	False	AATAAA	-14	NA	185143246	185150382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
WTC11_00068222	chr4	+	3761	19	FSM	ENSG00000109762.17	ENST00000652585.2	3745	19	-16	0	-16	0	multi-exon	FALSE	canonical	3	69	junction_13	16.1826000139	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTGCTCTATGATATT	185208842	True	NA	NA	False	AATAAA	-14	NA	185209581	185363966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_185210256_185247293_185247379_185258847_185259065_185264437_185264611_185266968_185267156_185288011_185288083_185310634_185310817_185320732_185320865_185323527_185323801_185332594_185332760_185339378_185339511_185341975_185342117_185346536_185346651_185351444_185351610_185353484_185353603_185357670_185357738_185361923_185362106_185362610_185362712_185363384
WTC11_00068223	chr4	+	1081	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	-60	-237	-30	-150	multi-exon	FALSE	canonical	3	23	junction_1	5.52268050859363	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGATAGAGAAGACGGGAA	185396736	False	NA	NA	False	NA	NA	NA	185396780	185400478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
WTC11_00068239	chr4	+	2481	3	NNC	ENSG00000179059.10	novel	2480	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	603	junction_2	17	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAATATGCCAAGTCTG	187972420	True	NA	41	True	ATTAAA	-13	NA	187995770	188005043	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_187995841_187999608_187999686_188002709
WTC11_00068240	chr4	+	2651	4	NNC	ENSG00000179059.10	novel	2647	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	299	junction_2	134.144201017661	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	187972420	True	NA	43	True	ATTAAA	-15	NA	187995770	188005045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_187995841_187999107_187999276_187999608_187999686_188002709
WTC11_00068241	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_2	55.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	187972420	True	NA	43	True	ATTAAA	-15	NA	187995770	188005045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_187995841_187999608_187999686_188002712
WTC11_00068242	chr4	+	2640	4	NNC	ENSG00000179059.10	novel	2647	4	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	229.231081856036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAATATGCCAAGTCT	187972432	True	NA	40	True	ATTAAA	-12	NA	187995782	188005042	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_187995841_187999107_187999280_187999608_187999686_188002709
WTC11_00068243	chr4	+	2839	4	NNC	ENSG00000179059.10	novel	2647	4	NA	NA	12	202	at_least_one_novel_splicesite	FALSE	canonical	3	299	junction_2	98.2932121540219	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTTTGAGCTGCCGTA	187972432	True	NA	26	True	AATAAA	-19	NA	187995782	188005248	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_187995841_187999107_187999276_187999608_187999686_188002712
WTC11_00068248	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_8	24.3964649078509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	NA	False	NA	42	True	AATAAA	-15	NA	189940871	189963192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
WTC11_00068249	chr4	+	1005	10	NNC	ENSG00000109536.12	novel	978	9	NA	NA	0	9480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	109.683382717914	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCTGGGCCCA	NA	False	NA	NA	False	NA	NA	NA	189940871	189972682	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092_189963201_189972663
WTC11_00068250	chr4	-	1432	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	0	23663	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	17.4610678049451	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTATACTCTTTCCC	-299871	True	NA	-9	True	TTTAAA	-5	NA	305474	247011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_248054_295437_295534_296028_296156_305307
WTC11_00068251	chr4	-	550	1	FSM	ENSG00000251188.1	ENST00000511111.1	550	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAACTAAGGAACTAACA	-269518	False	NA	NA	False	NA	NA	NA	269531	268981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_269000_269500
WTC11_00068253	chr4	-	236	1	FSM	ENSG00000250321.1	ENST00000506193.1	142	1	-2	-92	-2	92	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACAGGATCTGTGGGC	NA	False	NA	NA	False	AATAAA	-27	NA	342964	342728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_342700_343000
WTC11_00068254	chr4	-	341	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	-23	1497	-23	-1117	multi-exon	FALSE	canonical	2	10	junction_1	144	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTTCAGAATCTCTC	-465719	True	NA	NA	False	AATAAA	-3	NA	474152	426931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_426974_472574_472702_473980
WTC11_00068255	chr4	-	1679	5	FSM	ENSG00000182903.16	ENST00000515578.5	1679	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.680678416912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	-465618	False	NA	NA	False	NA	NA	NA	474051	425814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_427120_435769_435880_437445_437512_472574_472702_473980
WTC11_00068256	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	25.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-465734	True	NA	NA	False	CATAAA	-1	NA	474167	444082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_444433_472574_472702_473980
WTC11_00068257	chr4	-	534	4	NNC	ENSG00000182903.16	novel	664	3	NA	NA	0	-195	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	123.834118436273	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTTTATAATGGAATTAA	-465734	True	NA	-62	True	NA	NA	NA	474167	444277	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_444433_467616_467682_472574_472702_473980
WTC11_00068258	chr4	-	599	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	0	-30231	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	133.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGATCATGACTGTT	-465696	True	NA	NA	False	AATAAA	-38	NA	474129	456045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_456369_472574_472702_473980
WTC11_00068259	chr4	-	338	5	NNC	ENSG00000169020.10	novel	303	4	NA	NA	0	56014	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6354.15597758664	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAGAATTTGAGGAGCC	-636081	True	NA	NA	False	ACTAAA	-41	NA	674276	616421	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_616457_672435_672520_673302_673402_673911_673967_674211
WTC11_00068260	chr4	-	335	5	NNC	ENSG00000169020.10	novel	303	4	NA	NA	0	56014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6354.15597758664	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAGAATTTGAGGAGCC	-636081	True	NA	NA	False	ACTAAA	-41	NA	674276	616421	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_616460_672441_672520_673302_673402_673911_673967_674211
WTC11_00068261	chr4	-	701	1	FSM	ENSG00000272927.1	ENST00000609172.1	737	1	-117	153	-117	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAAACCAGGGGGGCCA	-661658	False	NA	NA	False	NA	NA	NA	662062	661361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_661400_662100
WTC11_00068262	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	12319	junction_3	1462.88330209746	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-636081	True	NA	-29	True	AATAAA	-21	NA	674276	672435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_673911_673967_674211
WTC11_00068264	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	7727.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-636135	True	NA	-31	True	AATAAA	-19	NA	674330	672437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_674211
WTC11_00068265	chr4	-	389	3	ISM	ENSG00000169026.13	ENST00000512400.1	1472	6	1638	523	1638	-490	3prime_fragment	FALSE	canonical	3	20	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACCTTCTTCAGCTGCA	-683442	False	NA	NA	False	NA	NA	NA	683463	682351	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_682377_682780_682891_683209
WTC11_00068266	chr4	-	601	2	ISM	ENSG00000169026.13	ENST00000512249.1	653	4	-305	3368	-217	-497	5prime_fragment	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTGGCGTGGCGGCCAT	NA	False	NA	NA	False	NA	NA	NA	689488	686585	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_686691_688992
WTC11_00068267	chr4	-	719	1	FSM	ENSG00000272588.1	ENST00000607877.1	719	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGACTGAACGAATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	757740	757021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_757000_757700
WTC11_00068268	chr4	-	1441	2	FSM	ENSG00000249592.7	ENST00000652800.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTGAGTGTGAAT	-780706	True	NA	-91	True	NA	NA	NA	781836	766239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_767616_781771
WTC11_00068269	chr4	-	917	3	FSM	ENSG00000249592.7	ENST00000691800.1	619	3	36	-334	0	334	multi-exon	FALSE	canonical	3	8	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCCTGAATTTTTTTTT	-780700	True	NA	-2	True	ATTAAA	-21	NA	781830	776720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_777421_780530_780689_781771
WTC11_00068270	chr4	-	4024	2	FSM	ENSG00000249592.7	ENST00000503185.5	618	2	19	-3425	0	331	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTATTCCTGAATTTTTT	-780700	True	NA	-5	True	ATTAAA	-18	NA	781830	776723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_780689_781771
WTC11_00068271	chr4	-	2114	4	FSM	ENSG00000168993.15	ENST00000304062.11	2112	4	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_3	1.24721912892465	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGGCCATTCCTTCCA	-825935	True	NA	-2	True	AATAAA	-17	NA	826129	784954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_786699_792432_792609_824491_824602_826045
WTC11_00068272	chr4	-	931	4	FSM	ENSG00000178950.18	ENST00000504668.5	929	4	0	-2	0	1	multi-exon	FALSE	canonical	3	24	junction_3	163.099833094812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-851907	False	NA	-1	True	ATTAAA	-17	NA	851921	849274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851018_851749
WTC11_00068273	chr4	-	3703	7	FSM	ENSG00000178950.18	ENST00000515868.5	3903	7	203	-3	203	1	multi-exon	FALSE	canonical	2	6	junction_3	123.103953361918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-869743	False	NA	-1	True	ATTAAA	-17	NA	869754	849274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851975_865121_865245_866363_866535_866955_867433_868538
WTC11_00068274	chr4	-	4463	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	-2	0	1	multi-exon	FALSE	canonical	3	212	junction_21	37.634295423774	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-926830	True	NA	-1	True	ATTAAA	-17	NA	932316	849274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
WTC11_00068275	chr4	-	4440	28	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	73	junction_7	52.2616872155624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-926840	True	NA	-1	True	ATTAAA	-17	NA	932326	849274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
WTC11_00068276	chr4	-	4283	25	FSM	ENSG00000178950.18	ENST00000511163.5	4280	25	0	-3	0	1	multi-exon	FALSE	canonical	3	40	junction_24	59.1264534705068	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-926887	True	NA	-1	True	ATTAAA	-17	NA	932373	849274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_932042
WTC11_00068277	chr4	-	1768	9	FSM	ENSG00000178950.18	ENST00000511980.5	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	134.743042491997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTACAGAATTAAACTA	-867152	False	NA	-34	True	NA	NA	NA	867162	849307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859361_859494_859605_859723_865121_865245_866363_866535_866955
WTC11_00068283	chr4	-	4649	23	FSM	ENSG00000145214.14	ENST00000273814.8	4649	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	12.0854396378315	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCCTCATCTTTG	-972827	True	NA	-2	True	AATACA	-21	NA	973569	958886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_960722_961048_961202_961466_961579_961687_961835_961981_962083_962434_962614_962771_962921_963138_963291_965175_965292_965490_965530_965927_966079_966465_966528_966747_966803_966963_967055_967128_967362_967548_967650_967727_967803_967879_968028_968281_968408_968478_968565_968810_968911_970992_971073_973211
WTC11_00068284	chr4	-	4729	23	NIC	ENSG00000145214.14	novel	4649	23	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	16.5958274154471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCCTCATCTTTG	-972820	True	NA	-2	True	AATACA	-21	NA	973562	958886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_960722_961048_961202_961466_961579_961687_961835_961981_962083_962434_962614_962771_962921_963138_963291_965175_965292_965490_965530_966063_966302_966465_966528_966747_966803_966963_967055_967128_967362_967548_967650_967727_967803_967879_968028_968281_968408_968478_968565_968810_968911_970992_971073_973211
WTC11_00068285	chr4	-	280	3	FSM	ENSG00000178222.13	ENST00000454487.6	631	3	49	302	17	-302	multi-exon	FALSE	canonical	2	6	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTGAGGGGTGTGG	-1113484	False	NA	NA	False	NA	NA	NA	1113498	1096764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1096840_1108342_1108405_1113355
WTC11_00068286	chr4	-	1820	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	-240	-1	22	1	multi-exon	FALSE	canonical	3	19	junction_5	3.26190128606002	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGCTGTCCCCACAC	-1172540	True	NA	-3	True	AATAAA	-24	NA	1172823	1166930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
WTC11_00068289	chr4	-	2502	10	FSM	ENSG00000159692.16	ENST00000382952.8	2488	10	0	-14	0	14	multi-exon	FALSE	canonical	3	724	junction_9	164.598576415547	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGGTGACTTTCTCTC	-1244758	True	NA	-1	True	AATAAA	-32	NA	1249130	1211430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
WTC11_00068290	chr4	-	2318	9	FSM	ENSG00000159692.16	ENST00000290921.10	2297	9	0	-21	0	18	multi-exon	FALSE	canonical	3	132	junction_8	361.133783209215	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGACTTTCTCTCATGA	-1244765	True	NA	3	True	AATAAA	-36	NA	1249137	1211426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248915
WTC11_00068291	chr4	-	2487	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	4	12	combination_of_known_junctions	FALSE	canonical	3	392	junction_1	286.794717309338	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCTGGTGACTTTCTC	-1244742	True	NA	-3	True	AATAAA	-30	NA	1249114	1211432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212427_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
WTC11_00068301	chr4	-	2744	5	FSM	ENSG00000174137.14	ENST00000308132.11	2848	5	52	52	52	-52	multi-exon	FALSE	canonical	3	8	junction_1	1.58113883008419	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTTTTAATAAAATCGT	-1684249	False	NA	NA	False	NA	NA	NA	1684261	1639938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1641608_1654977_1655724_1657407_1657469_1668666_1668906_1684232
WTC11_00068302	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_7	19.0712948095898	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-1703859	True	NA	2	True	NA	NA	NA	1712319	1692730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
WTC11_00068307	chr4	-	2667	3	FSM	ENSG00000168936.11	ENST00000303277.6	2678	3	16	-5	-11	5	multi-exon	FALSE	canonical	3	8	junction_1	99.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGTGTTGCCCGAT	-1721328	False	NA	0	True	AATAAA	-22	NA	1721342	1715946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1718151_1718627_1720632
WTC11_00068308	chr4	-	3007	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	-2	0	intron_retention	TRUE	canonical	3	14	junction_3	136.768254926191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721319	False	NA	-5	True	AATAAA	-17	NA	1721333	1715951	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720438
WTC11_00068309	chr4	-	5374	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	-3	0	3	multi-exon	FALSE	canonical	3	152	junction_9	29.7020709337157	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAGTAATAATATTTCT	-1852013	True	NA	0	True	ATTAAA	-27	NA	1856156	1811475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
WTC11_00068313	chr4	-	2460	11	FSM	ENSG00000185049.16	ENST00000542778.5	2465	11	0	5	0	1	multi-exon	FALSE	canonical	3	386	junction_6	31.8785194135487	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATAGCTGTGTTTGGG	-2009211	False	NA	-14	True	ATTAAA	-22	NA	2009235	1982721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
WTC11_00068315	chr4	-	2502	10	FSM	ENSG00000185049.16	ENST00000463820.5	2495	10	0	-7	0	0	multi-exon	FALSE	canonical	3	386	junction_6	32.6681783474869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	NA	False	NA	-15	True	ATTAAA	-21	NA	1992244	1982722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543
WTC11_00068320	chr4	-	553	3	FSM	ENSG00000185049.16	ENST00000443203.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCAACGTTCAGGATA	-2002895	True	NA	NA	False	NA	NA	NA	2008972	1991587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1991716_2006997_2007200_2008749
WTC11_00068321	chr4	-	965	8	ISM	ENSG00000130997.16	ENST00000382865.5	2899	24	101027	44	31007	-2	3prime_fragment	FALSE	canonical	2	3	junction_4	2.16653584115759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATCCTTGTCTGAGTG	NA	False	NA	-5	True	AGTAAA	-17	NA	2128204	2071961	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_2072300_2072967_2073030_2075451_2075520_2080957_2081037_2081632_2081744_2085612_2085745_2095850_2095934_2128112
WTC11_00068322	chr4	-	256	1	FSM	ENSG00000249006.1	ENST00000503377.1	1900	1	-37	1681	-37	-1681	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATTTAATCAAGCTCG	NA	False	NA	NA	False	NA	NA	NA	2090654	2090398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2090400_2090700
WTC11_00068324	chr4	-	7682	5	ISM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	-1543	0	658	intron_retention	FALSE	canonical	3	122	junction_4	21.7873242964803	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACCAAATAAATATGGAAT	-2240366	True	NA	NA	False	AAGAAA	-41	NA	2242121	2226805	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
WTC11_00068325	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	53.1977443130815	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240366	True	NA	NA	False	NA	NA	NA	2242121	2228348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
WTC11_00068326	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	64.9206246119059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240378	True	NA	NA	False	NA	NA	NA	2242133	2228348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
WTC11_00068329	chr4	-	3704	7	NNC	ENSG00000123933.17	novel	3871	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	86.9572053113229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-2259980	True	NA	-3	True	TATAAA	-20	NA	2262022	2247431	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2248117_2248196_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
WTC11_00068330	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	12.8436754864019	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-2260067	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
WTC11_00068333	chr4	-	4289	14	NNC	ENSG00000159733.14	novel	4114	13	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.04652906672515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCTCCTTTCTTCCAT	-2418184	True	NA	-18	True	CATAAA	-18	NA	2418698	2269596	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452_2339656_2341477_2341616_2343081_2343204_2353932_2354074_2418284
WTC11_00068335	chr4	-	1999	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	7	0	-7	multi-exon	FALSE	canonical	2	13	junction_5	125.164531717256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTGGAAGCTGG	-2750811	True	NA	-1	True	AATAAA	-27	NA	2756331	2741654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
WTC11_00068336	chr4	-	1999	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	-60	7	-54	-7	multi-exon	FALSE	canonical	3	262	junction_2	31.7679083352996	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTGGAAGCTGG	-2750876	True	NA	-1	True	AATAAA	-27	NA	2756396	2741654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
WTC11_00068340	chr4	-	1772	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	4	0	0	multi-exon	FALSE	canonical	3	694	junction_8	88.6665664159834	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGCCTTTCGCCATAT	-2926464	False	NA	-7	True	AATAAA	-19	NA	2933947	2930564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
WTC11_00068341	chr4	-	2173	12	FSM	ENSG00000109736.15	ENST00000329687.8	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_9	85.3110012961327	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	-2926975	False	142	-10	True	AATAAA	-16	NA	2934458	2930567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
WTC11_00068342	chr4	-	1719	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	-2	0	0	multi-exon	FALSE	canonical	3	495	junction_12	122.397122333638	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGCCTTTCGCCATAT	-2927342	True	NA	-7	True	AATAAA	-19	NA	2934825	2930564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
WTC11_00068344	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	234.762335494147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	-2927333	True	NA	21	True	AATAAA	-1	NA	2934816	2930582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
WTC11_00068345	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	254.784854954233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-2927351	True	NA	-7	True	TTTAAA	-4	NA	2934834	2930610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
WTC11_00068349	chr4	-	2895	19	FSM	ENSG00000087269.16	ENST00000314262.10	2889	19	0	-6	0	0	multi-exon	FALSE	canonical	2	8	junction_1	34.3515323934432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956961	True	NA	-20	True	TATAAA	-6	NA	2963368	2937935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2938189_2938811_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
WTC11_00068350	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_11	10.8222505638354	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956999	True	NA	-20	True	TATAAA	-6	NA	2963406	2937935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
WTC11_00068352	chr4	-	10459	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	-13	0	13	multi-exon	TRUE	canonical	3	759	junction_5	25.3964484099004	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCATGTGTATTTTTAAG	-3526726	True	NA	11	True	NA	NA	NA	3532422	3503598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
WTC11_00068353	chr4	-	2843	4	FSM	ENSG00000251669.6	ENST00000313946.12	2845	4	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	19.9053315024448	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAATTCCACCCATCT	-3954622	True	NA	NA	False	AAGAAA	-11	NA	3955415	3941761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3943373_3947143_3948221_3953110_3953174_3955323
WTC11_00068354	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	-3954570	True	NA	NA	False	NA	NA	NA	3955363	3942851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3943373_3953110_3953174_3955323
WTC11_00068355	chr4	-	555	1	FSM	ENSG00000251669.6	ENST00000674264.1	1200	1	-15	660	-15	-660	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTCGAGCACTGCACA	-3954654	True	NA	NA	False	NA	NA	NA	3955447	3954892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3954900_3955400
WTC11_00068356	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	-4107502	False	NA	NA	False	NA	NA	NA	4107583	4048210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4050183_4107279
WTC11_00068357	chr4	-	2053	5	NNC	ENSG00000132406.12	novel	1737	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	99.7606510604256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246543	True	NA	-1	True	AATAAA	-17	NA	4248212	4235541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
WTC11_00068358	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	102.172342147961	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246543	True	NA	-1	True	AATAAA	-17	NA	4248212	4235541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
WTC11_00068359	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	21.4709105535839	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246554	True	NA	-1	True	AATAAA	-17	NA	4248223	4235541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
WTC11_00068360	chr4	-	1575	11	NNC	ENSG00000145220.14	novel	1554	10	NA	NA	0	15185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.994924715194	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGTCTCTACTAAAAATA	-4282369	True	NA	NA	False	NA	NA	NA	4290154	4252515	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4252541_4267704_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
WTC11_00068362	chr4	-	1481	9	NIC	ENSG00000145220.14	novel	1554	10	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_8	135.629089800087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282350	True	NA	0	True	AATAAA	-26	NA	4290135	4267700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4290035
WTC11_00068363	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	28.7573930376345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282369	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
WTC11_00068364	chr4	-	1286	11	FSM	ENSG00000168818.10	ENST00000505286.5	1380	11	0	94	0	-94	multi-exon	FALSE	canonical	1	3	junction_1	67.4232155863246	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGCTCGTCATCCCT	-4536159	True	NA	NA	False	NA	NA	NA	4542010	4415835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4416164_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
WTC11_00068365	chr4	-	3497	3	FSM	ENSG00000168818.10	ENST00000503692.5	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	NA	False	NA	NA	False	AATAAA	-20	NA	4426613	4418967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420945_4423517_4423588_4425163
WTC11_00068366	chr4	-	1206	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	17	935	0	40	multi-exon	FALSE	canonical	3	202	junction_3	18.3098334236006	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACAGACGTATTCCCC	-4536180	True	NA	NA	False	NA	NA	NA	4542031	4419902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
WTC11_00068367	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018683	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
WTC11_00068370	chr4	-	4510	22	FSM	ENSG00000173040.13	ENST00000344408.10	4382	22	-113	-15	-113	15	multi-exon	FALSE	canonical	3	13	junction_21	4.30366610578857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTTTGCTTTATGTA	-5708250	False	NA	13	True	AATAAA	-31	NA	5708672	5562423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708285
WTC11_00068371	chr4	-	4842	22	FSM	ENSG00000173040.13	ENST00000310917.6	4828	22	0	-14	0	14	multi-exon	FALSE	canonical	3	10	junction_21	4.78991760446841	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCATGTTTGCTTTATGT	NA	False	NA	12	True	AATAAA	-30	NA	5709548	5562424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708828
WTC11_00068373	chr4	-	1876	13	FSM	ENSG00000072832.15	ENST00000506216.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	262.063433266749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTCGGGAATTACAATT	-5875460	True	NA	NA	False	AAGAAA	-12	NA	5888471	5748083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5748313_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5866667_5866757_5888227
WTC11_00068374	chr4	-	1385	2	FSM	ENSG00000072832.15	ENST00000513911.5	2436	2	1156	-105	1156	85	multi-exon	FALSE	canonical	3	690	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTTGGTAGAGACTGG	-5825653	False	NA	81	True	NA	NA	NA	5825705	5820678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493
WTC11_00068375	chr4	-	2930	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	-19	0	0	multi-exon	FALSE	canonical	3	655	junction_4	32.9284682860992	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGGTGGTGTCTGGA	-5875470	True	NA	-4	True	AATAAA	-40	NA	5888481	5820763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
WTC11_00068376	chr4	-	3174	14	FSM	ENSG00000072832.15	ENST00000324989.12	3174	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	169.123742380206	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGGTGGTGTCTGGA	-5891819	True	NA	-4	True	AATAAA	-40	NA	5893086	5820763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5892588
WTC11_00068377	chr4	-	2764	14	FSM	ENSG00000072832.15	ENST00000512574.1	2764	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	187.992068320659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTCCACACTAGAAAG	-5888924	False	NA	NA	False	NA	NA	NA	5890191	5821242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5889624
WTC11_00068378	chr4	-	2576	13	FSM	ENSG00000152969.20	ENST00000282924.9	2585	13	0	9	0	-7	multi-exon	FALSE	canonical	3	14	junction_10	8.18365579812728	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCAATATTTTGCCTT	-6199812	True	NA	-10	True	AATAAA	-9	NA	6200591	6053765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
WTC11_00068379	chr4	-	4485	9	FSM	ENSG00000074211.14	ENST00000382599.9	4450	9	-39	4	-39	-4	multi-exon	TRUE	canonical	1	2	junction_8	7.4791376508258	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAGGTCCAGAATGCT	-6472100	True	NA	-5	True	AATAAA	-19	NA	6472653	6320584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6323594_6329261_6329354_6333561_6333732_6347845_6348011_6372522_6372701_6375818_6375932_6378406_6378573_6380996_6381095_6472159
WTC11_00068380	chr4	-	1703	2	FSM	ENSG00000251580.3	ENST00000656634.1	1719	2	0	16	0	-16	multi-exon	FALSE	canonical	3	19	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTCTCTTCTTTTCCC	NA	False	NA	NA	False	ATTAAA	-2	NA	6673965	6669578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6671000_6673683
WTC11_00068381	chr4	-	1161	2	FSM	ENSG00000251580.3	ENST00000654965.1	1161	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGACTTCTTGCTTGAG	NA	False	NA	NA	False	AATAAA	-33	NA	6673949	6670098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6670994_6673683
WTC11_00068382	chr4	-	1583	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	-5	0	5	multi-exon	FALSE	canonical	3	262	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATGGATGTTCTTCAT	-6704969	True	NA	36	True	AATAAA	-21	NA	6709865	6707695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6708644_6709230
WTC11_00068383	chr4	-	2256	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	-128	-1	-90	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAATGGATGTTCT	NA	False	NA	32	True	AATAAA	-17	NA	6709955	6707699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6707700_6710000
WTC11_00068384	chr4	-	1588	2	NNC	ENSG00000178988.11	novel	1578	2	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATGGATGTTCTTCAT	-6704969	True	NA	36	True	AATAAA	-21	NA	6709865	6707695	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_6708644_6709225
WTC11_00068385	chr4	-	1116	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGATCTCATGGTATA	-6986897	True	NA	-2	True	ATTAAA	-19	NA	6987036	6985920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6985900_6987000
WTC11_00068386	chr4	-	2105	1	FSM	ENSG00000173013.6	ENST00000310085.6	2153	1	26	22	26	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTTTGGATTTATTA	-7042937	True	NA	NA	False	NA	NA	NA	7042975	7040870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7040900_7043000
WTC11_00068387	chr4	-	2900	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	-247	0	247	multi-exon	FALSE	canonical	3	905	junction_2	13.9124245031395	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTAGTAGTTACTGGAT	-7051333	True	NA	-5	True	ATTAAA	-15	NA	7068064	7058647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
WTC11_00068388	chr4	-	1103	3	FSM	ENSG00000109519.13	ENST00000504920.5	2195	3	0	1092	0	-483	multi-exon	FALSE	canonical	3	905	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTCTCTCCCCTTGCT	-7051333	True	NA	NA	False	NA	NA	NA	7068064	7061620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7062467_7064060_7064224_7067970
WTC11_00068389	chr4	-	7536	17	FSM	ENSG00000196526.11	ENST00000358461.6	7516	17	23	-43	23	42	multi-exon	TRUE	canonical	3	44	junction_10	8.91255259451522	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCTGCTTTTCCTGA	-7936621	True	NA	1	True	NA	NA	NA	7939903	7758671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7763792_7768843_7769009_7772819_7773011_7774738_7774904_7778761_7778877_7786193_7786312_7793680_7793827_7800441_7800654_7809613_7809764_7816017_7816100_7819075_7819172_7838523_7838704_7843138_7843351_7855465_7855575_7868621_7868720_7871951_7872081_7939655
WTC11_00068390	chr4	-	2549	14	FSM	ENSG00000163995.21	ENST00000428004.6	2573	14	6	18	6	-18	multi-exon	FALSE	canonical	1	1	junction_3	4.99467171715321	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACTTTAAACAAAGAAAGG	-8158585	True	NA	NA	False	NA	NA	NA	8158826	8007042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8008201_8009049_8009103_8029655_8029777_8032647_8032681_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
WTC11_00068391	chr4	-	4119	1	FSM	ENSG00000251615.3	ENST00000505448.3	3249	1	-1096	226	-1096	-226	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCAAAAATGTCTTATG	NA	False	NA	-17	True	AATAAA	-16	NA	8359434	8355315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8355300_8359400
WTC11_00068392	chr4	-	2907	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	25	-679	0	0	multi-exon	FALSE	canonical	3	46	junction_11	11.6372507722543	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATGATCTGTTTGTCC	-8427506	True	NA	64	True	NA	NA	NA	8428461	8366281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
WTC11_00068393	chr4	-	2411	16	NIC	ENSG00000087008.16	novel	2253	18	NA	NA	66	-204	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	18.6507074634956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATTTGCACATAGAT	-8427440	True	NA	-24	True	NA	NA	NA	8428395	8366485	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8428350
WTC11_00068394	chr4	-	572	3	FSM	ENSG00000087008.16	ENST00000512411.5	711	3	139	0	139	0	multi-exon	FALSE	canonical	3	59	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	NA	False	NA	-25	True	AAGAAA	-24	NA	8373676	8366711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8367081_8370907_8370995_8373560
WTC11_00068396	chr4	-	2069	2	FSM	ENSG00000215612.8	ENST00000400677.5	1917	2	-151	-1	-151	1	multi-exon	FALSE	canonical	3	36	junction_1	0	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCACTGCTTTGTGATC	-8871926	False	NA	-6	True	AATAAA	-19	NA	8871990	8867046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8868346_8871220
WTC11_00068398	chr4	-	5269	17	Fusion	ENSG00000261490.1_ENSG00000071127.17	novel	2993	15	NA	NA	0	-5	multi-exon	FALSE	canonical	0	0	junction_8	624.285141181496	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTTCATGTGATTA	-10084417	True	NA	NA	False	AATAAA	-39	NA	10116868	10068093	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_10069825_10071245_10071374_10073990_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
WTC11_00068399	chr4	-	2993	15	FSM	ENSG00000071127.17	ENST00000499869.7	2993	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	423.642616277601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	-10084348	True	NA	-9	True	ATTAAA	-16	NA	10116799	10074338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
WTC11_00068400	chr4	-	3143	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	-1	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	423.642616277601	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	-10116727	False	NA	-9	True	ATTAAA	-16	NA	10116949	10074338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
WTC11_00068401	chr4	-	2723	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	-1	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	624.151973441095	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	-10116727	False	NA	-9	True	ATTAAA	-16	NA	10116949	10074338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
WTC11_00068404	chr4	-	601	1	FSM	ENSG00000223086.1	ENST00000411154.1	129	1	49	-521	49	521	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCAGCCTGAGTGATGG	-10115613	False	NA	NA	False	NA	NA	NA	10115835	10115234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10115200_10115800
WTC11_00068406	chr4	-	7139	3	NIC	ENSG00000178163.8	novel	6954	3	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	21	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTTCAAACGTTATGC	-10456310	True	NA	-16	True	AATAAA	-23	NA	10457405	10439884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_10446540_10454593_10454989_10457316
WTC11_00068407	chr4	-	6961	3	FSM	ENSG00000178163.8	ENST00000326756.4	6954	3	0	-7	0	7	multi-exon	FALSE	canonical	3	11	junction_1	23	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTATGCAGGTGACTTTAT	-10456331	True	NA	-4	True	AATAAA	-35	NA	10457426	10439872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10446540_10454804_10454989_10457316
WTC11_00068408	chr4	-	4196	2	FSM	ENSG00000178163.8	ENST00000503068.1	4196	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	-10456315	True	NA	NA	False	AATAAA	-29	NA	10457410	10450886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10454989_10457316
WTC11_00068409	chr4	-	1571	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	96	5493	96	1115	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTCTTTTTAATTTTTA	-11428751	False	NA	NA	False	NA	NA	NA	11428798	11398642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_11400114_11428698
WTC11_00068410	chr4	-	1691	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	-1	0	1	multi-exon	FALSE	canonical	3	211	junction_1	45.3051382908777	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-13480737	True	NA	-10	True	AATAAA	-15	NA	13484340	13367722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
WTC11_00068411	chr4	-	1786	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	-1	0	1	multi-exon	FALSE	canonical	3	88	junction_2	105.362542234527	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-13480737	True	NA	-10	True	AATAAA	-15	NA	13484340	13367722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
WTC11_00068412	chr4	-	1552	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_3	119.095927722152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-13480728	True	NA	-10	True	AATAAA	-15	NA	13484331	13367722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
WTC11_00068413	chr4	-	1789	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	-2	0	1	multi-exon	FALSE	canonical	3	4	junction_1	141.967659438798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	13484365	13367722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
WTC11_00068415	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	35.7188129701982	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-13623190	True	NA	-10	True	TATAAA	-21	NA	13627725	13568737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
WTC11_00068419	chr4	-	1148	2	ISM	ENSG00000038219.13	ENST00000482713.1	4367	6	-12	12028	12	-12028	5prime_fragment	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTGAGGCTCAACTTT	-13623178	True	NA	0	True	ATTAAA	-20	NA	13627713	13625533	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_13626313_13627344
WTC11_00068420	chr4	-	3340	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	87	-590	0	-35	multi-exon	FALSE	canonical	3	74	junction_10	110.804512543488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCCCTAATAAGACAGAG	-15649287	True	NA	NA	False	NA	NA	NA	15655295	15604415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
WTC11_00068421	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	22.8569464277274	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-15649349	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
WTC11_00068422	chr4	-	2951	12	FSM	ENSG00000118564.15	ENST00000511441.5	2951	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	165.955286221299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649333	True	NA	0	True	AATAAA	-28	NA	15655341	15605005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15641523_15641628_15644492_15644709_15655203
WTC11_00068425	chr4	-	714	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-18	-7829	at_least_one_novel_splicesite	FALSE	canonical	3	179	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGTGATCTGTG	-15673696	True	NA	-3	True	ATTAAA	-22	NA	15681585	15667559	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_15668041_15681352
WTC11_00068426	chr4	-	787	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-18	-7829	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGTGATCTGTG	-15673696	True	NA	-3	True	ATTAAA	-22	NA	15681585	15667559	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_15668041_15681279
WTC11_00068427	chr4	-	2047	2	FSM	ENSG00000007062.12	ENST00000513448.5	2042	2	0	-5	0	3	multi-exon	FALSE	canonical	3	287	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTACTTCCTTGA	-15971927	False	NA	0	True	AATAAA	-21	NA	15971945	15968224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042
WTC11_00068428	chr4	-	4019	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	-5	0	3	multi-exon	TRUE	canonical	3	39	junction_26	48.7381756256183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTACTTCCTTGA	-16083700	False	NA	0	True	AATAAA	-21	NA	16083732	15968224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
WTC11_00068429	chr4	-	4019	28	FSM	ENSG00000007062.12	ENST00000447510.7	4021	28	0	2	0	0	multi-exon	FALSE	canonical	1	1	junction_24	72.2784396587681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-16081050	True	NA	-5	True	AATAAA	-16	NA	16084023	15968229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16035734_16035762_16038945_16039002_16075686_16076119_16083977
WTC11_00068430	chr4	-	4347	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	2	0	0	multi-exon	FALSE	canonical	3	126	junction_26	36.4620253132054	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-16084346	False	NA	-5	True	AATAAA	-16	NA	16084378	15968229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
WTC11_00068437	chr4	-	4485	14	FSM	ENSG00000169762.17	ENST00000405303.7	4521	14	22	14	0	-14	multi-exon	TRUE	canonical	3	41	junction_12	8.00147915319744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAAAACGTTTGTGTA	-16226425	False	NA	NA	False	AATATA	-2	NA	16226449	16160518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16163538_16166632_16166794_16170652_16170730_16174203_16174273_16174669_16174730_16176118_16176229_16179576_16179658_16186534_16186605_16186780_16186879_16188219_16188356_16191360_16191524_16202461_16202581_16213767_16213899_16226258
WTC11_00068439	chr4	-	2304	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	-9	0	9	multi-exon	FALSE	canonical	3	60	junction_1	51.183144546953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	-16898283	False	NA	2	True	AATAAA	-27	NA	16898562	16501531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00068440	chr4	-	2485	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	-9	0	9	multi-exon	FALSE	canonical	3	33	junction_2	68.4027594472621	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	-16898315	False	NA	2	True	AATAAA	-27	NA	16898594	16501531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00068441	chr4	-	2635	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	-9	0	4	multi-exon	FALSE	canonical	2	4	junction_1	69.2510959170632	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCTGGCTATTTGTGT	-16893495	True	NA	-3	True	AATAAA	-22	NA	16898634	16501536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00068442	chr4	-	2584	8	FSM	ENSG00000169744.13	ENST00000304523.10	2384	8	-191	-9	-158	9	multi-exon	FALSE	canonical	3	98	junction_1	39.7558877682903	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	NA	False	NA	2	True	AATAAA	-27	NA	16898836	16501531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00068443	chr4	-	2460	8	NIC	ENSG00000169744.13	novel	2295	8	NA	NA	-48	4	intron_retention	FALSE	canonical	3	51	junction_2	66.5622311243012	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCTGGCTATTTGTGT	-16898447	False	NA	-3	True	AATAAA	-22	NA	16898726	16501536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16508540_16508684_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00068447	chr4	-	337	2	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	609	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACCGGCCATTTACACTT	NA	False	NA	NA	False	NA	NA	NA	16975364	16974996	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16975080_16975110
WTC11_00068448	chr4	-	1377	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	-3	0	0	multi-exon	FALSE	canonical	2	7	junction_2	209.519831996878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-17507647	True	NA	-8	True	AATAAA	-17	NA	17512069	17486394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
WTC11_00068449	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	20.0969870599771	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-17507668	True	NA	-8	True	AATAAA	-17	NA	17512090	17486394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
WTC11_00068452	chr4	-	2129	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTGTTTTGGTTT	-17795563	False	NA	NA	False	AATAAA	-17	NA	17795574	17793445	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_17793400_17795600
WTC11_00068453	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-17802584	True	NA	-5	True	AATAAA	-24	NA	17810757	17800654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17804772_17805106_17805226_17810446
WTC11_00068454	chr4	-	757	2	FSM	ENSG00000163257.11	ENST00000507768.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACAGTGGTATGGGCCA	-17802585	True	NA	NA	False	AATATA	-19	NA	17810758	17804311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17804757_17810446
WTC11_00068456	chr4	-	5600	7	FSM	ENSG00000178177.16	ENST00000675131.1	5600	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	51.0895183857598	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	-18021866	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17845902_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021601
WTC11_00068457	chr4	-	1013	5	FSM	ENSG00000178177.16	ENST00000510451.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	67.633201905573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTATGTGAATTTTTTA	-18018604	True	NA	93	True	NA	NA	NA	18021757	17845496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17845902_17909093_17909346_17961902_17962033_17972819_17972886_18021597
WTC11_00068458	chr4	-	5604	7	FSM	ENSG00000178177.16	ENST00000326877.8	5604	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	45.3970140966219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	-18021866	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17845902_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
WTC11_00068459	chr4	-	5145	7	FSM	ENSG00000178177.16	ENST00000382226.5	5009	7	0	-136	0	102	multi-exon	FALSE	canonical	3	18	junction_1	53.93720628863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGATAGTAACATACTA	-18021850	False	NA	NA	False	AAGAAA	-26	NA	18021860	17880492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17884753_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
WTC11_00068461	chr4	-	1978	6	FSM	ENSG00000178177.16	ENST00000674942.1	1978	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	60.2083050749645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCAGTGAGCCGAGATT	-18018602	True	NA	NA	False	NA	NA	NA	18021755	17892291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17893584_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
WTC11_00068462	chr4	-	4937	3	FSM	ENSG00000152990.14	ENST00000499527.6	3968	3	0	-969	0	945	multi-exon	FALSE	canonical	3	297	junction_2	29	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGGTTTGAGTTTTAGA	-22394846	False	NA	NA	False	AATAAA	-22	NA	22394868	22386430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22388948_22389087_22389184_22392544
WTC11_00068463	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	28.4644027202789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-22512362	True	NA	-2	True	AATAAA	-21	NA	22516066	22387375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
WTC11_00068468	chr4	-	842	2	NNC	ENSG00000251292.1	novel	639	4	NA	NA	8085	345	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	23725494	23722916	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_23723471_23725206
WTC11_00068469	chr4	-	1206	3	NNC	ENSG00000289201.1	novel	1172	2	NA	NA	-207	308	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	4	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCGAGGAAAAGAGCTC	-24472934	True	NA	NA	False	NA	NA	NA	24473158	24471152	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24472116_24472374_24472465_24473005
WTC11_00068472	chr4	-	3092	4	FSM	ENSG00000109606.13	ENST00000508032.5	3028	4	0	-64	0	64	multi-exon	FALSE	canonical	3	1282	junction_3	25.4863798048204	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTTTATTATTATAAT	-24539067	False	NA	51	True	NA	NA	NA	24539150	24527410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050
WTC11_00068473	chr4	-	3062	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	-64	0	64	multi-exon	FALSE	canonical	3	1041	junction_5	118.504437786726	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTTTATTATTATAAT	-24548931	True	NA	51	True	NA	NA	NA	24584554	24527410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
WTC11_00068474	chr4	-	2111	2	FSM	ENSG00000109606.13	ENST00000513036.5	1848	2	-262	-1	-262	-1	multi-exon	FALSE	canonical	3	1301	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCAAAGCCCTTTG	-24531077	False	NA	-14	True	AATAAA	-15	NA	24531145	24527475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600
WTC11_00068477	chr4	-	4113	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	-271	27	-115	-27	multi-exon	FALSE	canonical	3	21	junction_3	3.42088867676851	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTAAAGGGGCTTTCT	-24913130	False	NA	-32	True	NA	NA	NA	24913157	24806143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
WTC11_00068478	chr4	-	6495	8	FSM	ENSG00000153012.12	ENST00000382114.9	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	10.4978131833565	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGATCTCTGGTC	-25030194	True	NA	NA	False	AATAAA	-18	NA	25030946	24998846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25004269_25012334_25012500_25017988_25018159_25019166_25019239_25024819_25024892_25026867_25026940_25028506_25028579_25030496
WTC11_00068480	chr4	-	2094	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	-22	0	22	multi-exon	FALSE	canonical	3	20	junction_1	3.63145976158349	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTTTTTTGTTTTTT	-25160019	True	NA	NA	False	ATTAAA	-12	NA	25160463	25153698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
WTC11_00068481	chr4	-	4553	24	FSM	ENSG00000091490.11	ENST00000399878.8	4543	24	0	-10	0	10	multi-exon	TRUE	canonical	3	282	junction_4	23.478019322429	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTTTTTCCCCTTTT	-25862158	True	NA	3	True	AATAAA	-30	NA	25862988	25747422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25862674
WTC11_00068482	chr4	-	739	3	FSM	ENSG00000091490.11	ENST00000512286.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	33	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCATCCCTTTATTGAA	-25757838	False	NA	NA	False	NA	NA	NA	25757852	25748063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25748565_25757533_25757607_25757687
WTC11_00068483	chr4	-	1326	5	FSM	ENSG00000091490.11	ENST00000510448.5	1326	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	141.055618463073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCCAGGTATAGTCA	-25765346	False	14	2	True	AATAAA	-34	NA	25765360	25755921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25756909_25757533_25757607_25757687_25757791_25758940_25759069_25765325
WTC11_00068484	chr4	-	347	3	FSM	ENSG00000091490.11	ENST00000509290.1	560	3	213	0	213	0	multi-exon	FALSE	canonical	3	301	junction_2	11	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGTTTGGAGATACT	-25776492	False	NA	NA	False	NA	NA	NA	25776506	25767583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25767610_25767739_25767831_25776276
WTC11_00068486	chr4	-	450	2	Antisense	novelGene_ENSG00000168214.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCCTTTTGGAGAGCAC	-26298938	True	NA	59	True	ATTAAA	-19	NA	26299094	26288096	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_26288450_26298997
WTC11_00068489	chr4	-	1532	1	ISM	ENSG00000181826.10	ENST00000454158.7	3617	7	74208	3	53213	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTTGTCTTGTGGG	NA	False	NA	-6	True	AATAAA	-11	NA	37612168	37610636	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_37610600_37612200
WTC11_00068490	chr4	-	3616	7	FSM	ENSG00000181826.10	ENST00000454158.7	3617	7	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_3	3.3166247903554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTTGTCTTGTGGGTG	-37685584	True	NA	-4	True	AATAAA	-13	NA	37686376	37610634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
WTC11_00068491	chr4	-	408	1	FSM	ENSG00000249649.1	ENST00000507850.1	322	1	-38	-48	-38	48	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAAGGTGGGCGGATCA	NA	False	NA	NA	False	NA	NA	NA	38007143	38006735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_38006700_38007100
WTC11_00068493	chr4	-	4878	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	-8	0	8	multi-exon	FALSE	canonical	3	195	junction_12	30.4856238887921	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACGACCCTGTCTTTGTT	-39359558	True	NA	1	True	AATAAA	-27	NA	39366362	39287447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
WTC11_00068494	chr4	-	4894	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	-8	0	8	multi-exon	FALSE	canonical	3	90	junction_12	45.8720291196668	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACGACCCTGTCTTTGTT	-39359571	True	NA	1	True	AATAAA	-27	NA	39366375	39287447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
WTC11_00068498	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_7	2869.57691541269	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	-39310807	True	NA	-71	True	NA	NA	NA	39458923	39452586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
WTC11_00068499	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_7	1393.20836597417	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	-39310806	True	NA	-17	True	AATAAA	-31	NA	39458922	39454123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
WTC11_00068502	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	6213	junction_3	1013.72263629325	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310772	True	NA	-30	True	AATAAA	-18	NA	39458888	39454136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
WTC11_00068504	chr4	-	1028	5	FSM	ENSG00000163682.17	ENST00000511075.5	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_4	1583.37590293651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGCTTTAAAAAAAATTT	-39310815	True	NA	NA	False	AGTAAA	-4	NA	39458931	39455810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
WTC11_00068507	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_9	82.238315254313	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-39511205	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
WTC11_00068516	chr4	-	6258	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	0	-6	0	6	multi-exon	FALSE	canonical	3	475	junction_1	44.7290453732248	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCTTAACTCTCT	-39635789	True	NA	NA	False	AATAAA	-19	NA	39638865	39546329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
WTC11_00068521	chr4	-	7138	33	FSM	ENSG00000121892.15	ENST00000303538.13	7131	33	0	-7	0	7	multi-exon	TRUE	canonical	0	0	junction_3	75.8225724965857	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGAGCCCTGAATATTC	-39974143	True	NA	NA	False	AATAAA	-27	NA	39977911	39822855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39825489_39837855_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
WTC11_00068522	chr4	-	4204	4	FSM	ENSG00000121892.15	ENST00000507766.1	4196	4	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_2	181.641282630231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAT	-39848544	False	NA	NA	False	ACTAAA	-6	NA	39848561	39837003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39838209_39841947_39842057_39844655_39844802_39845817
WTC11_00068523	chr4	-	2681	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	4	0	-4	multi-exon	FALSE	canonical	3	333	junction_12	40.0303218406581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATATCTGGTTTCATT	-39977196	True	NA	-5	True	AATAAA	-18	NA	39977956	39898017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
WTC11_00068524	chr4	-	5114	7	FSM	ENSG00000163694.15	ENST00000295971.12	5114	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_6	86.1503853089984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40629850	False	4181	-17	True	AATAAA	-17	NA	40629864	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40629395
WTC11_00068533	chr4	-	2273	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	1	-129	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACATTGTCGTTTTAAA	-40854877	True	NA	NA	False	NA	NA	NA	40857191	40814735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
WTC11_00068534	chr4	-	4116	17	NIC	ENSG00000163697.17	novel	8972	18	NA	NA	0	-129	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	79.60282265724	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACATTGTCGTTTTAAA	-41214547	False	NA	NA	False	NA	NA	NA	41214569	40814735	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41100638_41100751_41142986_41143143_41214404
WTC11_00068535	chr4	-	4250	18	FSM	ENSG00000163697.17	ENST00000508593.6	8899	18	-60	4709	6	-129	multi-exon	FALSE	canonical	0	0	junction_10	77.7128954398629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACATTGTCGTTTTAAA	-41214580	False	NA	NA	False	NA	NA	NA	41214602	40814735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945074_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
WTC11_00068536	chr4	-	1701	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	-20	0	0	multi-exon	TRUE	canonical	3	97	junction_6	46.4351399504968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCAAACTTCTGCCT	-40854841	True	NA	-8	True	AATAAA	-24	NA	40857155	40815312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
WTC11_00068537	chr4	-	701	6	FSM	ENSG00000163697.17	ENST00000510925.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	81.9965852947548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAAGGACTCGGCTATT	NA	False	NA	NA	False	NA	NA	NA	40830515	40816084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830457
WTC11_00068538	chr4	-	590	6	FSM	ENSG00000163697.17	ENST00000510670.5	591	6	1	0	1	0	multi-exon	FALSE	canonical	3	44	junction_5	70.0953636127241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCGTGTGCGATTCCT	-40854877	True	NA	NA	False	AATGAA	-16	NA	40857191	40822029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
WTC11_00068543	chr4	-	8627	6	FSM	ENSG00000188848.17	ENST00000502486.6	8627	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	43.3792577161021	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTTTTGCTTGTCT	-42151397	True	NA	2	True	AATACA	-20	NA	42152655	42110852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42117736_42120053_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
WTC11_00068544	chr4	-	8661	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	31	0	31	0	multi-exon	FALSE	canonical	3	20	junction_5	36.6856920338161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTAACTTGGTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	42152847	42110939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
WTC11_00068546	chr4	-	1103	2	FSM	ENSG00000289643.1	ENST00000685812.1	1117	2	14	0	14	0	multi-exon	FALSE	canonical	3	20	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTTCTGGTCTATGTTT	-42291898	True	NA	-5	True	ATTAAA	-14	NA	42292630	42285822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42286402_42292106
WTC11_00068547	chr4	-	8182	36	NNC	ENSG00000124406.16	novel	8209	36	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	9.4831321786827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAAGTTTTGATTGCT	-42655734	True	NA	0	True	AATAAA	-19	NA	42657063	42408372	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594364_42600479_42600519_42616032_42616079_42624535_42624635_42625613_42625714_42626994_42627110_42656824
WTC11_00068549	chr4	-	1047	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	0	9169	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	16.4485730553004	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCATGTTTGTTAAAC	-44725566	True	NA	NA	False	AATAAA	-18	NA	44726556	44692625	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_44692786_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
WTC11_00068550	chr4	-	3069	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	-45	-789	-13	789	multi-exon	TRUE	canonical	3	37	junction_5	8.02080627701064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGCAAGCACATAGTA	-44725611	True	NA	NA	False	AATAAA	-24	NA	44726601	44701005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
WTC11_00068551	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	19.6102014268084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-44725533	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
WTC11_00068552	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.28009661779378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	-44725555	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
WTC11_00068555	chr4	-	4222	1	FSM	ENSG00000259959.1	ENST00000563286.1	4218	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTTTTGTAAAATTA	-47844325	False	NA	-3	True	AATAAA	-20	NA	47844339	47840117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47840100_47844300
WTC11_00068556	chr4	-	10864	22	ISM	ENSG00000259959.1_ENSG00000170448.12	ENST00000507489.2	3880	23	297	-7122	297	4	3prime_fragment	FALSE	canonical	3	96	junction_21	13.4636488839334	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTTTTGTAAAATTA	-47914276	False	NA	-3	True	AATAAA	-20	NA	47914286	47840117	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968
WTC11_00068557	chr4	-	3887	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	-7	0	0	multi-exon	FALSE	canonical	3	9	junction_22	26.6614836560871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	-47911084	True	NA	7	True	ATTAAA	-23	NA	47914583	47847232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
WTC11_00068558	chr4	-	4617	23	FSM	ENSG00000170448.12	ENST00000381538.7	3728	23	0	-889	0	882	multi-exon	FALSE	canonical	3	71	junction_22	16.6921568161084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTTGCATTTCTCTG	-47911117	True	NA	NA	False	NA	NA	NA	47914616	47846350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
WTC11_00068559	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	12.9090510346778	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-48268889	True	NA	-4	True	AGTAAA	-20	NA	48269838	48135782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
WTC11_00068560	chr4	-	11681	64	FSM	ENSG00000075539.15	ENST00000358350.9	11692	64	11	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_51	13.9948880275803	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAACAAATTCATTAG	-48777295	True	NA	2	True	AATAAA	-25	NA	48780268	48497356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48499681_48500029_48500221_48501622_48501734_48502827_48502846_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
WTC11_00068561	chr4	-	7261	30	FSM	ENSG00000075539.15	ENST00000507873.7	7031	30	-50	-180	-50	-4	multi-exon	FALSE	canonical	3	28	junction_22	11.5112517979069	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGATGCAAACAAATTCA	-48557742	False	NA	-2	True	AATAAA	-21	NA	48557753	48497360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452
WTC11_00068563	chr4	-	11475	64	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_22	11.7011368541056	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTTGTATTTTAAC	-48777275	True	NA	-1	True	AATAAA	-17	NA	48780248	48497566	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546269_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
WTC11_00068569	chr4	-	1099	7	FSM	ENSG00000145247.12	ENST00000508632.6	1109	7	0	10	0	-10	multi-exon	FALSE	canonical	3	2676	junction_5	150.218729413701	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCAGAGCTAGACTCC	-48881314	True	NA	NA	False	NA	NA	NA	48906774	48885028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
WTC11_00068570	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	1036.43261237767	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-48906921	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
WTC11_00068571	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	1093.20563481899	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	-48881328	True	NA	NA	False	AATAAA	-16	NA	48906788	48885387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
WTC11_00068572	chr4	-	778	1	FSM	ENSG00000250473.1	ENST00000507982.1	486	1	-177	-115	-177	115	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTTTTCACTCTATT	NA	False	NA	NA	False	NA	NA	NA	51865712	51864934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_51864900_51865700
WTC11_00068573	chr4	-	4259	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	-11	0	11	multi-exon	FALSE	canonical	3	511	junction_4	65.6493716649291	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGGGTTATATATT	-52032500	True	NA	-5	True	AATAAA	-26	NA	52038299	52020694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
WTC11_00068574	chr4	-	663	5	FSM	ENSG00000163069.13	ENST00000506357.5	663	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	281.160430181774	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAAAGTTTGAATGTT	-52032446	True	NA	NA	False	NA	NA	NA	52038245	52028770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52028922_52029677_52029864_52031864_52031962_52033430_52033641_52038226
WTC11_00068578	chr4	-	3700	5	NNC	ENSG00000226887.8	novel	2744	4	NA	NA	17	260	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	41.3544133074089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTACCAAAAGTACAAAAAT	-52749983	False	NA	NA	False	NA	NA	NA	52751382	52742292	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_52742639_52742889_52745944_52750709_52750830_52750929_52751070_52751342
WTC11_00068579	chr4	-	3968	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	-1224	0	260	multi-exon	FALSE	canonical	3	41	junction_2	34.0293990543471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTACCAAAAGTACAAAAAT	-52750000	False	NA	NA	False	NA	NA	NA	52751399	52742292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
WTC11_00068581	chr4	-	3534	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	-372	0	372	multi-exon	FALSE	canonical	3	47	junction_8	7.88095013307406	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTCCTTCATTCATTCC	-53364786	True	NA	5	True	AATAAA	-35	NA	53366061	52872609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
WTC11_00068583	chr4	-	2042	1	FSM	ENSG00000272650.1	ENST00000609843.1	298	1	-1745	1	-1745	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTACTTCGAGCATCATT	NA	False	NA	NA	False	AATAAA	-17	NA	53999457	53997415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_53997400_53999500
WTC11_00068584	chr4	-	2243	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	-93	-1041	-93	1041	multi-exon	FALSE	canonical	3	135	junction_3	19.8736005796635	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTCCTGTATTAAAT	NA	False	NA	NA	False	TATAAA	-45	NA	54064698	54008747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
WTC11_00068585	chr4	-	528	6	FSM	ENSG00000109220.11	ENST00000510894.1	528	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	63.8686151407716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	-54064281	False	NA	-2	True	NA	NA	NA	54064298	54009978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54049038_54049111_54049250_54049306_54064181
WTC11_00068587	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_24	37.7641784604394	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-55120890	True	NA	-15	True	ATTAAA	-20	NA	55125595	55078480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
WTC11_00068593	chr4	-	451	4	FSM	ENSG00000134852.15	ENST00000509151.5	476	4	25	0	16	0	multi-exon	FALSE	canonical	3	8	junction_3	7.48331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTGTAGTAAAATGAGC	-55546596	False	NA	NA	False	NA	NA	NA	55546630	55482772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55482829_55489373_55489466_55509911_55510066_55546481
WTC11_00068595	chr4	-	753	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	3	0	-1	multi-exon	TRUE	canonical	3	39	junction_7	118.630729577121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCTTAGTGTTTTAA	-55636274	False	NA	-3	True	ATTAAA	-13	NA	55636284	55595231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
WTC11_00068596	chr4	-	815	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	1	0	-1	multi-exon	FALSE	canonical	3	281	junction_9	40.7624857793729	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCTTAGTGTTTTAA	-55630474	True	NA	-3	True	ATTAAA	-13	NA	55636298	55595231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
WTC11_00068598	chr4	-	3587	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	-6	0	3	multi-exon	FALSE	canonical	3	39	junction_4	11.8226693349718	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTACACTTGATTAGA	-56386213	True	NA	NA	False	ATTAAA	-31	NA	56387491	56338283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
WTC11_00068599	chr4	-	3347	14	NIC	ENSG00000157426.14	novel	3581	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	18.6293653793646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGAAACTTGTCTACACT	-56386145	True	NA	NA	False	ATTAAA	-23	NA	56387423	56338291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_56338792_56342834_56342967_56343561_56343685_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
WTC11_00068601	chr4	-	2621	10	ISM	ENSG00000157426.14	ENST00000513376.5	3241	14	0	10672	0	-34	5prime_fragment	FALSE	canonical	3	7	junction_9	20.9254998317812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCCCAAAACTCAACAACC	-56386145	True	NA	NA	False	AATAAA	-21	NA	56387423	56348961	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56387361
WTC11_00068602	chr4	-	4046	3	FSM	ENSG00000128059.8	ENST00000425339.2	4043	3	0	-3	0	0	multi-exon	FALSE	canonical	3	619	junction_2	19	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56400878	False	NA	-11	True	GATAAA	-24	NA	56400916	56393361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56395549_56396618_56396740_56399178
WTC11_00068603	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_6	32.9915140604368	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56424687	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
WTC11_00068604	chr4	-	756	5	FSM	ENSG00000128059.8	ENST00000507724.1	563	5	-182	-11	-63	0	multi-exon	TRUE	canonical	3	91	junction_3	240.509355327397	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-56435527	False	NA	NA	False	NA	NA	NA	56435678	56403062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
WTC11_00068605	chr4	-	808	6	FSM	ENSG00000128059.8	ENST00000510643.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	321.03582354622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-56424580	True	NA	NA	False	NA	NA	NA	56435508	56403062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56403186_56403288_56403402_56403979_56404119_56406494_56406702_56407649_56407717_56435349
WTC11_00068607	chr4	-	525	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	196	1	189	0	multi-exon	FALSE	canonical	1	1	junction_3	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTACTGTTCTCTGTT	-56821493	False	NA	-2	True	AATAAA	-16	NA	56821505	56809861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
WTC11_00068610	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	27.3643117135359	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-56973913	True	NA	-10	True	AATAAA	-14	NA	56977606	56963349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
WTC11_00068612	chr4	-	1923	3	FSM	ENSG00000289308.1	ENST00000692606.1	1948	3	14	11	13	-11	multi-exon	FALSE	canonical	3	67	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACAGCAGCATGATTTA	-61763990	True	NA	-12	True	AATAAA	-18	NA	61769635	61749398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_61751029_61752123_61752176_61769394
WTC11_00068613	chr4	-	698	2	FSM	ENSG00000289308.1	ENST00000693254.1	710	2	12	0	12	0	multi-exon	FALSE	canonical	3	103	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-61763991	True	NA	-1	True	AATAAA	-22	NA	61769636	61764253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_61764710_61769394
WTC11_00068614	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	14.5496171092126	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-67542850	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
WTC11_00068615	chr4	-	2799	15	FSM	ENSG00000145241.11	ENST00000513216.5	2799	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	26.5638430032637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTATTTGATAAACAT	NA	False	NA	-6	True	AATAAA	-22	NA	67530866	67472476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492750_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814
WTC11_00068617	chr4	-	9547	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	-7	0	7	multi-exon	FALSE	canonical	3	162	junction_20	20.0292510703096	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTTTAAATTTTCT	-67696527	True	NA	5	True	AATAAA	-28	NA	67701155	67612644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
WTC11_00068621	chr4	-	6306	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	-336	-2987	0	50	multi-exon	FALSE	canonical	3	83	junction_4	67.9719611310428	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATACTGGAGATTTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	68350089	68310336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
WTC11_00068626	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	212.752856097815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831331	False	NA	-4	True	AATAAA	-32	NA	70839503	70819757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
WTC11_00068627	chr4	-	6518	6	FSM	ENSG00000163626.17	ENST00000507544.3	6824	6	0	306	0	-306	multi-exon	FALSE	canonical	3	14	junction_3	18.3847763108502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAACCCAGATAATTG	-73064990	True	NA	NA	False	TATAAA	-24	NA	73069716	73052667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73058288_73061812_73061921_73064777_73064903_73065249_73065414_73068028_73068130_73069316
WTC11_00068628	chr4	-	6540	6	FSM	ENSG00000163626.17	ENST00000295890.8	6846	6	0	306	0	-306	multi-exon	FALSE	canonical	3	46	junction_4	7.22772439983706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAACCCAGATAATTG	-73065015	True	NA	NA	False	TATAAA	-24	NA	73069741	73052667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
WTC11_00068632	chr4	-	10797	34	FSM	ENSG00000132466.20	ENST00000358602.9	10797	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	57.9133483996998	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTCACAACACTTATT	-73249110	True	NA	NA	False	ATTAAA	-17	NA	73258798	73073375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00068633	chr4	-	9860	33	NIC	ENSG00000132466.20	novel	8456	34	NA	NA	-349	-530	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	62.5651457357649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTTTAAGAAATGATTT	-73258046	True	NA	61	True	NA	NA	NA	73259147	73073905	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135263_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00068634	chr4	-	11182	34	FSM	ENSG00000132466.20	ENST00000558247.5	8456	34	-812	-1914	-336	52	multi-exon	FALSE	canonical	0	0	junction_15	61.1696372222881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACCAAAACATTGTTTTA	-73258033	False	NA	NA	False	TTTAAA	-2	NA	73259134	73073323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135263_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00068637	chr4	-	4267	25	NIC	ENSG00000132466.20	novel	2717	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.1073114428593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTGTTTT	-73249110	True	NA	NA	False	NA	NA	NA	73258798	73100856	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73101174_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00068638	chr4	-	6734	25	NIC	ENSG00000132466.20	novel	3259	19	NA	NA	-349	1626	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	57.2432522709494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTTCTGAGTAGTGTG	-73258046	True	NA	-5	True	AATAAA	-23	NA	73259147	73111457	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73113312_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00068640	chr4	-	763	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	10	0	-10	multi-exon	FALSE	canonical	3	41	junction_2	1	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAAGTAAAT	-73981597	True	NA	NA	False	AATAAA	-20	NA	73982027	73980820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73981292_73981416_73981544_73981862
WTC11_00068641	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_3	17.4610678049451	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	-73997863	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
WTC11_00068642	chr4	-	1171	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	-96	0	22	0	multi-exon	FALSE	canonical	3	46	junction_1	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-74038089	True	NA	NA	False	AATAAA	-18	NA	74038785	74036588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
WTC11_00068644	chr4	-	226	1	FSM	ENSG00000251017.1	ENST00000514414.1	678	1	325	127	325	-127	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCAGAAATTGCTTCCT	NA	False	NA	NA	False	AATAAA	-3	NA	74086347	74086121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_74086100_74086300
WTC11_00068645	chr4	-	577	3	FSM	ENSG00000081041.9	ENST00000296031.4	577	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGCAGAGGCCACCT	-74099085	True	NA	NA	False	NA	NA	NA	74099195	74097675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_74097772_74098600_74098685_74098798
WTC11_00068647	chr4	-	669	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42555	-20	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTGTTTCTCACAAA	-75126582	True	NA	-22	True	AATAAA	-15	NA	75127272	75081944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_75082358_75084588_75084704_75127131
WTC11_00068660	chr4	-	5504	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	-192	-170	0	170	multi-exon	FALSE	canonical	3	133	junction_10	618.109868874458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTACCTGTACACAT	-75638804	True	NA	-16	True	AATAAA	-12	NA	75673397	75641678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
WTC11_00068661	chr4	-	5811	4	FSM	ENSG00000138757.15	ENST00000679329.1	5811	4	0	0	0	0	multi-exon	FALSE	canonical	3	1887	junction_2	171.147759423124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75650237	False	NA	NA	False	NA	NA	NA	75650347	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638
WTC11_00068663	chr4	-	6181	11	FSM	ENSG00000138757.15	ENST00000677192.1	6181	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	801.656715807957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75672925	False	NA	NA	False	NA	NA	NA	75673161	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
WTC11_00068668	chr4	-	5095	10	FSM	ENSG00000138757.15	ENST00000678244.1	5095	10	0	0	0	0	multi-exon	FALSE	canonical	2	94	junction_9	647.398554901761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75673230	False	NA	NA	False	NA	NA	NA	75673466	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75673207
WTC11_00068669	chr4	-	6379	11	FSM	ENSG00000138757.15	ENST00000678875.1	6379	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	593.361576106846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75673312	False	NA	NA	False	NA	NA	NA	75673548	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
WTC11_00068671	chr4	-	5595	14	FSM	ENSG00000138757.15	ENST00000677606.1	5595	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	994.895231021869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715804	True	NA	NA	False	NA	NA	NA	75724419	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75695074_75724055_75724177_75724275
WTC11_00068672	chr4	-	5456	14	FSM	ENSG00000138757.15	ENST00000678798.1	5456	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_12	1000.50451770136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715804	True	NA	NA	False	NA	NA	NA	75724419	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694792_75694930_75724055_75724177_75724275
WTC11_00068673	chr4	-	5456	14	FSM	ENSG00000138757.15	ENST00000677620.1	5456	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	993.948035978165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715809	True	NA	NA	False	NA	NA	NA	75724424	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
WTC11_00068674	chr4	-	5515	13	FSM	ENSG00000138757.15	ENST00000676470.1	5515	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	894.741474145217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715823	True	NA	NA	False	NA	NA	NA	75724438	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75695074_75724055_75724177_75724275
WTC11_00068675	chr4	-	5367	13	FSM	ENSG00000138757.15	ENST00000678971.1	5367	13	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_12	962.05040004265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715841	True	NA	NA	False	NA	NA	NA	75724456	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
WTC11_00068677	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_10	565.804241765648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715860	True	NA	NA	False	NA	NA	NA	75724475	75641848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
WTC11_00068680	chr4	-	5442	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	124	-176	0	176	multi-exon	FALSE	canonical	3	112	junction_11	771.367734493855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTACACATTATGTT	-75715850	True	NA	-10	True	AATAAA	-18	NA	75724465	75641672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
WTC11_00068682	chr4	-	4325	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	-4	0	0	multi-exon	FALSE	canonical	3	156	junction_5	760.758983781959	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	-75638818	True	NA	-16	True	AATAAA	-23	NA	75673411	75642781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
WTC11_00068684	chr4	-	4180	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	23	-1594	0	0	multi-exon	FALSE	canonical	3	1778	junction_4	192.258263801585	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGCATTTATCTATGT	-75638785	True	NA	-29	True	AATAAA	-10	NA	75673378	75642794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
WTC11_00068693	chr4	-	2388	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	53	0	-53	multi-exon	FALSE	canonical	3	112	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGCTTTCATAAATCT	-75715812	True	NA	NA	False	NA	NA	NA	75724427	75721940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75724177_75724275
WTC11_00068694	chr4	-	499	3	NIC	ENSG00000138757.15	novel	2441	2	NA	NA	0	-81	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	47	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACGGCCTGACTTGCAC	-75715762	True	NA	NA	False	AATAAA	-23	NA	75724377	75721968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_75722245_75724055_75724177_75724275
WTC11_00068695	chr4	-	1859	11	FSM	ENSG00000138744.16	ENST00000286733.9	1859	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.45991543302581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCGTTATGCTCTCCCT	-75940573	True	NA	NA	False	AATAAA	-16	NA	75941013	75913659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75914339_75914867_75914986_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
WTC11_00068697	chr4	-	858	7	FSM	ENSG00000138744.16	ENST00000505594.1	1425	7	0	567	0	-567	multi-exon	FALSE	canonical	3	39	junction_5	4.20317340430616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTGTCACAGTGTC	-75939820	False	440	NA	False	NA	NA	NA	75940260	75919908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000
WTC11_00068698	chr4	-	1745	3	FSM	ENSG00000138744.16	ENST00000507187.2	1750	3	0	5	0	-5	multi-exon	FALSE	canonical	3	35	junction_2	4.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTCACTCTAATAGTT	-75940543	True	NA	NA	False	AATAAA	-31	NA	75940983	75934895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75936236_75940000_75940166_75940743
WTC11_00068700	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	85.8056920026017	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	-75986634	True	NA	-1	True	AATAAA	-29	NA	75990938	75949905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
WTC11_00068701	chr4	-	3012	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	-9	0	0	multi-exon	FALSE	canonical	3	352	junction_12	33.8689618377021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	-75986641	True	NA	-1	True	AATAAA	-29	NA	75990945	75949905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
WTC11_00068707	chr4	-	2254	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	-5	0	0	multi-exon	FALSE	canonical	3	560	junction_11	47.4343391323798	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	-76137487	True	NA	0	True	AATAAA	-29	NA	76148397	76114658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
WTC11_00068712	chr4	-	1325	3	FSM	ENSG00000138750.15	ENST00000513248.1	531	3	-15	-779	-15	0	multi-exon	FALSE	canonical	3	659	junction_1	19	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	-76118441	False	NA	0	True	AATAAA	-29	NA	76118452	76114658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76115495_76117663_76117775_76118074
WTC11_00068714	chr4	-	4741	12	FSM	ENSG00000138760.11	ENST00000264896.8	4694	12	-52	5	0	-5	multi-exon	TRUE	canonical	3	160	junction_8	29.7026587005995	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGCTCTAGAAGTCA	-76211170	True	NA	-26	True	AATAAA	-14	NA	76213876	76158741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
WTC11_00068715	chr4	-	3147	11	FSM	ENSG00000138760.11	ENST00000640957.1	3255	11	0	108	0	-91	multi-exon	FALSE	canonical	3	160	junction_7	25.8420200448804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAACAGCGGATGAA	-76211118	True	NA	NA	False	NA	NA	NA	76213824	76161756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
WTC11_00068719	chr4	-	222	1	FSM	ENSG00000271676.1	ENST00000603335.1	964	1	444	298	444	-298	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTACAAAAGGTACCCCT	NA	False	NA	NA	False	NA	NA	NA	77113014	77112792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_77112800_77113000
WTC11_00068724	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_4	39.5201214573032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-78936698	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
WTC11_00068725	chr4	-	3372	5	FSM	ENSG00000163291.14	ENST00000515853.5	3370	5	0	-2	0	0	multi-exon	FALSE	canonical	3	37	junction_4	118.585412256314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAACTGCTGCTTGTCA	-78936484	False	NA	83	True	AATAAA	-17	NA	78939224	78917939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78939039
WTC11_00068727	chr4	-	520	2	FSM	ENSG00000163291.14	ENST00000505715.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTAAAAGTAATTTATA	-78926596	False	11	NA	False	AAAAAG	-45	NA	78926609	78923516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78923948_78926520
WTC11_00068728	chr4	-	707	2	FSM	ENSG00000163291.14	ENST00000505735.1	570	2	-137	0	-137	0	multi-exon	FALSE	canonical	3	290	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTCGGGATATGGAG	-78928017	False	NA	NA	False	NA	NA	NA	78930757	78926599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78926719_78930169
WTC11_00068730	chr4	-	7917	17	FSM	ENSG00000163297.18	ENST00000403729.7	8419	17	16	486	16	-486	multi-exon	FALSE	canonical	3	19	junction_14	4.97454457714473	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAATAAATGTAATCCAC	NA	False	NA	NA	False	AATAAA	-3	NA	80073213	79901631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_79907468_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
WTC11_00068731	chr4	-	1640	14	FSM	ENSG00000138669.10	ENST00000509474.5	1640	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	4.62435026621204	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGAAATTCCTGCAC	-81154029	True	NA	NA	False	NA	NA	NA	81154253	81089596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81089804_81092385_81092453_81104369_81104433_81105812_81105936_81110447_81110612_81135154_81135297_81137392_81137483_81140532_81140670_81142793_81142948_81144231_81144331_81148883_81148953_81151959_81152055_81153643_81153722_81154101
WTC11_00068733	chr4	-	565	4	FSM	ENSG00000138670.19	ENST00000436139.6	6323	4	0	5758	0	2332	multi-exon	FALSE	canonical	3	18	junction_3	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTAACCTGAATTTAGC	-81471571	True	NA	NA	False	NA	NA	NA	81471890	81456650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81456789_81457498_81457622_81459331_81459515_81471769
WTC11_00068734	chr4	-	514	4	FSM	ENSG00000138670.19	ENST00000514050.6	537	4	0	23	0	-23	multi-exon	FALSE	canonical	2	10	junction_1	4.96655480858378	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAAATTGATCTTATA	-82044222	False	NA	NA	False	NA	NA	NA	82044244	81602754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81602923_81824517_81824572_81915310_81915359_82044000
WTC11_00068738	chr4	-	3068	9	FSM	ENSG00000138668.19	ENST00000313899.12	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	3310	junction_3	1351.33949749869	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTCCCTCTGTCGTT	-82287582	True	NA	-5	True	AATAAA	-18	NA	82373991	82352497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
WTC11_00068739	chr4	-	4597	2	FSM	ENSG00000138668.19	ENST00000514325.1	4597	2	0	0	0	0	multi-exon	FALSE	canonical	3	6515	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-82358470	False	NA	-29	True	AATAAA	-17	NA	82358842	82353828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82356896_82357312
WTC11_00068740	chr4	-	1585	8	FSM	ENSG00000138668.19	ENST00000353341.8	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	3696	junction_2	1211.89812328615	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-82287577	True	NA	-29	True	AATAAA	-17	NA	82373986	82353828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
WTC11_00068741	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1681	junction_7	1967.99113362861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-82287574	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
WTC11_00068742	chr4	-	735	3	FSM	ENSG00000138668.19	ENST00000508119.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	3696	junction_1	1409.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAAGCTTTGCCTTCA	-82357020	False	338	-19	True	AATAAA	-6	NA	82357392	82354846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82355402_82356795_82356896_82357312
WTC11_00068747	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_4	208.249583166183	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	-82411250	True	NA	-21	True	AATAAA	-19	NA	82429397	82424624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
WTC11_00068748	chr4	-	2360	9	FSM	ENSG00000152795.18	ENST00000502762.4	2356	9	0	-4	0	0	multi-exon	FALSE	canonical	3	264	junction_2	1063.42782283284	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	-82430382	False	NA	-21	True	AATAAA	-19	NA	82430401	82424624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
WTC11_00068749	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	897.887068344344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	-82430380	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
WTC11_00068751	chr4	-	1493	1	FSM	ENSG00000227304.3	ENST00000488045.1	1493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGGAACATTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	82496278	82494785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82494800_82496300
WTC11_00068753	chr4	-	4298	27	FSM	ENSG00000138674.17	ENST00000395310.7	4298	27	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_14	154.256107644275	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAAAGACTGGACATTT	-82880960	True	NA	-4	True	AATAAA	-26	NA	82891153	82818508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00068755	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_13	101.334558312223	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880943	True	NA	-4	True	ATTAAA	-14	NA	82891136	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00068756	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	159.809574772715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880960	True	NA	-4	True	ATTAAA	-14	NA	82891153	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00068759	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	208.116298256528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881021	True	NA	-5	True	ATTAAA	-13	NA	82891214	82818661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00068760	chr4	-	4245	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	11	-1	4	0	multi-exon	FALSE	canonical	3	168	junction_26	173.839942026529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82881062	True	NA	-4	True	ATTAAA	-14	NA	82891255	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00068763	chr4	-	4085	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	55	-339	0	0	multi-exon	FALSE	canonical	3	131	junction_5	177.168341702955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAATCCTATTTTATGTG	-82880955	True	NA	-15	True	ATTAAA	-3	NA	82891148	82818671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00068764	chr4	-	4104	26	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	175.668260081325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAATCCTATTTTATGTG	-82881010	True	NA	-15	True	ATTAAA	-3	NA	82891203	82818671	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00068772	chr4	-	2124	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	-19	-388	0	388	multi-exon	FALSE	canonical	3	462	junction_11	82.9622038806062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTTGCATGCCTGATG	-82881010	True	NA	NA	False	NA	NA	NA	82891203	82862822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00068788	chr4	-	6247	13	FSM	ENSG00000189308.11	ENST00000340417.8	6121	13	-5	-121	-5	121	multi-exon	TRUE	canonical	3	15	junction_12	15.5534472777652	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGAAATCTGGTCATA	-83009406	False	1422	NA	False	TATAAA	-20	NA	83010828	82924481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83010483
WTC11_00068790	chr4	-	4214	13	FSM	ENSG00000189308.11	ENST00000510557.5	2257	13	-112	-1845	-73	0	multi-exon	FALSE	canonical	3	10	junction_11	15.4782553567542	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGCATTTTTTCTTTA	-83011577	True	NA	NA	False	AATAAA	-24	NA	83012999	82925714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83012791
WTC11_00068791	chr4	-	1853	12	NIC	ENSG00000189308.11	novel	2257	13	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	21.0560056017476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTGTTGTATGACTT	-83011498	True	NA	NA	False	TATAAA	-17	NA	83012920	82927779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82970326_82970470_82978882_82979007_82984823_82984877_83012791
WTC11_00068792	chr4	-	771	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	15	0	-15	multi-exon	FALSE	canonical	3	9	junction_4	2.48746859276655	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTACTGATAAGATTC	-83109741	True	NA	NA	False	TATAAA	-37	NA	83109843	83090702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
WTC11_00068793	chr4	-	1539	7	FSM	ENSG00000173085.15	ENST00000647002.2	1525	7	-13	-1	-13	1	multi-exon	FALSE	canonical	3	163	junction_5	16.9648329067974	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCTTACTGTTCTTTA	-83281937	True	NA	-6	True	AATAAA	-16	NA	83284811	83263822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83284511
WTC11_00068794	chr4	-	4580	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	1	0	-1	multi-exon	FALSE	canonical	3	9	junction_8	5.28212328957598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTATGACTATTCTTT	-83334580	True	NA	NA	False	AATAAA	-19	NA	83334848	83292461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
WTC11_00068795	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	-83334533	True	NA	NA	False	NA	NA	NA	83334801	83318929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83319470_83322218_83322365_83334555
WTC11_00068797	chr4	-	3540	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	-32	35	0	-8	multi-exon	FALSE	canonical	2	8	junction_12	9.96429612325095	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAATGAAAAAATACATT	-83454036	True	NA	-33	True	ATTAAA	-15	NA	83455855	83407380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
WTC11_00068800	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	9.52627944162882	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	-83481028	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
WTC11_00068801	chr4	-	2718	8	FSM	ENSG00000163322.14	ENST00000475656.6	2718	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.6820970402953	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTCAATATTTAAA	-83481031	True	NA	-17	True	AATAAA	-17	NA	83485103	83460944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83476642_83476680_83482153_83482245_83484985
WTC11_00068802	chr4	-	1249	10	NIC	ENSG00000163322.14	novel	4210	9	NA	NA	2	-541	combination_of_known_junctions	FALSE	canonical	2	16	junction_8	47.3544553811407	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTTAGATACACAAGACAA	-83480991	True	NA	NA	False	CATAAA	-43	NA	83485063	83462615	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
WTC11_00068803	chr4	-	682	6	FSM	ENSG00000163322.14	ENST00000511801.1	682	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	56.6483892092264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTGGCCAGTCACT	-83481031	True	NA	NA	False	TATAAA	-12	NA	83485103	83470202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
WTC11_00068804	chr4	-	15170	67	NIC	ENSG00000163625.16	novel	14559	68	NA	NA	47	742	combination_of_known_junctions	FALSE	canonical	3	18	junction_65	13.9123007453614	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGTATGTTTTGCTT	-84962770	True	NA	NA	False	ATTAAA	-31	NA	84966643	84668854	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_84672992_84677198_84677397_84678167_84678280_84678918_84679243_84682373_84682471_84683942_84684126_84688085_84688266_84690505_84690665_84691630_84691786_84692884_84693033_84695969_84696183_84696731_84696824_84702352_84702507_84704337_84704445_84705393_84705512_84708908_84709029_84709292_84709348_84713158_84713240_84715297_84715384_84716895_84717017_84718421_84718571_84721408_84721573_84724425_84724595_84726860_84726912_84733381_84733610_84735042_84735121_84736169_84736328_84737183_84737367_84739009_84739120_84740186_84740417_84741760_84741922_84743699_84743800_84751482_84751717_84753696_84753877_84755265_84755401_84756925_84757162_84765809_84766028_84766251_84766373_84772834_84772930_84774819_84774982_84775064_84775139_84778502_84778656_84780107_84780299_84782962_84783075_84785978_84786140_84787481_84787714_84789725_84789908_84794518_84794738_84794878_84794980_84796520_84796753_84797995_84798109_84801649_84801865_84803289_84803468_84809886_84810345_84817391_84817586_84820084_84820187_84821083_84821552_84826814_84826982_84829003_84829191_84831412_84831606_84836928_84837091_84841153_84841264_84849901_84850026_84860411_84860623_84896910_84897011_84932269_84932364_84966208
WTC11_00068810	chr4	-	229	1	FSM	ENSG00000252062.1	ENST00000516253.1	101	1	42	-170	42	170	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGACCTATAAATTTA	NA	False	NA	NA	False	ACTAAA	-24	NA	84886444	84886215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_84886200_84886400
WTC11_00068812	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	6.53386241243963	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	-87219677	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
WTC11_00068816	chr4	-	4176	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	30	0	-30	multi-exon	FALSE	canonical	2	9	junction_15	7.89767898393783	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTTTAAATAAATGAGAA	-88158610	False	NA	NA	False	AATATA	-33	NA	88158639	88090298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
WTC11_00068817	chr4	-	804	4	FSM	ENSG00000118777.12	ENST00000505480.6	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	8.60232526704263	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGCCAATTTCAAATGT	-88158995	False	NA	NA	False	GATAAA	-12	NA	88159024	88131843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88131918_88132575_88132636_88139792_88140015_88158576
WTC11_00068818	chr4	-	453	4	FSM	ENSG00000118777.12	ENST00000503830.2	475	4	22	0	22	0	multi-exon	FALSE	canonical	3	6	junction_3	11.0453610171873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGCCAATTTCAAATGT	-88159272	True	NA	NA	False	GATAAA	-12	NA	88159301	88131843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88131918_88132575_88132636_88139792_88140015_88159204
WTC11_00068819	chr4	-	6323	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	-14	0	14	multi-exon	FALSE	canonical	3	29	junction_6	5.4594464513864	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTATTTGGCATCCA	-88283510	True	NA	3	True	AATAAA	-32	NA	88284561	88257605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
WTC11_00068822	chr4	-	4863	17	FSM	ENSG00000138640.15	ENST00000395002.6	4945	17	76	6	-27	-1	multi-exon	FALSE	canonical	3	11	junction_3	12.75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATAAGTACTTTTAT	-88822985	True	NA	NA	False	ATTAAA	-16	NA	88823285	88725960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
WTC11_00068828	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.9849495089392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054508	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
WTC11_00068829	chr4	-	758	6	NNC	ENSG00000138640.15	novel	2206	5	NA	NA	0	2490	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	35.6561355169065	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCAGTTGTGGGAGTCC	-89054508	True	NA	NA	False	ATTAAA	-27	NA	89057162	88987133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_88987218_88990972_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
WTC11_00068830	chr4	-	2035	5	FSM	ENSG00000138640.15	ENST00000515600.1	2206	5	171	0	11	0	multi-exon	FALSE	canonical	3	7	junction_4	32.2984132737198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-89054520	True	NA	-12	True	AATAAA	-8	NA	89057174	88989623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
WTC11_00068831	chr4	-	13779	2	FSM	ENSG00000185477.5	ENST00000609438.2	14037	2	0	258	0	-258	multi-exon	FALSE	canonical	1	3	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTCAACATGAAATTT	-89307612	False	NA	NA	False	AGTAAA	-30	NA	89307800	89236640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89250234_89307614
WTC11_00068832	chr4	-	3455	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	-289	11	-140	3	multi-exon	FALSE	canonical	3	262	junction_2	14.1279864099595	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAATATGTATTTGG	-89837334	False	NA	NA	False	AATAAA	-10	NA	89837450	89724109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
WTC11_00068833	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	97.034014654656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	-89835604	True	NA	0	True	AATAAA	-23	NA	89837139	89726052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
WTC11_00068834	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	98.2213826007352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-89835633	True	NA	NA	False	NA	NA	NA	89837168	89726576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
WTC11_00068837	chr4	-	592	2	Genic_Genomic	ENSG00000187653.11	novel	135	1	NA	NA	0	93235	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTGTGTAATTCAGCAC	NA	False	NA	NA	False	GATAAA	-6	NA	90839037	90745667	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_90745708_90838485
WTC11_00068838	chr4	-	10888	3	Fusion	ENSG00000280056.1_ENSG00000249152.1	novel	616	2	NA	NA	-267	7492	multi-exon	FALSE	canonical	3	955	junction_1	50.5	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCATGTATATCTT	-92277324	False	NA	-31	True	AATAAA	-21	NA	92277342	92252874	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_92263356_92269242_92269357_92277049
WTC11_00068839	chr4	-	4597	5	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-267	15892	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	485.843081663205	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCATGTATATCTT	-92277324	False	NA	-31	True	AATAAA	-21	NA	92277342	92252874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92256732_92257852_92258021_92263190_92263356_92269242_92269357_92277049
WTC11_00068841	chr4	-	385	1	FSM	ENSG00000280056.1	ENST00000624435.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTCTTATTATAGTTA	-92260737	False	NA	NA	False	NA	NA	NA	92260751	92260366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92260400_92260800
WTC11_00068842	chr4	-	565	3	FSM	ENSG00000248511.1	ENST00000504213.1	592	3	17	10	17	-10	multi-exon	FALSE	canonical	0	0	junction_2	4	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATTTTAAAATGCTTT	-92304035	False	126	NA	False	AATAAA	-5	NA	92304161	92297260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92297630_92300798_92300886_92304052
WTC11_00068844	chr4	-	6893	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	2.5	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGAGTTTTCTTGG	-97136774	True	NA	NA	False	AATAAA	-11	NA	97141383	97103808	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97110427_97134546_97134736_97141297
WTC11_00068845	chr4	-	1808	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_2	14	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	-97136831	True	NA	-17	True	AATAAA	-42	NA	97141440	97133324	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97134736_97139504_97139759_97141297
WTC11_00068847	chr4	-	3347	8	FSM	ENSG00000168785.8	ENST00000305798.8	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	41.5932686861708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-98657426	True	NA	-5	True	AATAAA	-32	NA	98658611	98470366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98658145
WTC11_00068852	chr4	-	686	6	FSM	ENSG00000151247.13	ENST00000511644.5	686	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	917.427141521331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908423	True	NA	NA	False	NA	NA	NA	98929101	98880844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98881143_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
WTC11_00068853	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	1071.44241895813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908447	True	NA	NA	False	NA	NA	NA	98929125	98880844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
WTC11_00068856	chr4	-	588	3	FSM	ENSG00000151247.13	ENST00000504472.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	739.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGCTATTATAATT	-98908455	True	NA	NA	False	NA	NA	NA	98929133	98895121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98895564_98901875_98901983_98929094
WTC11_00068857	chr4	-	2209	1	FSM	ENSG00000272777.1	ENST00000609071.1	870	1	-1	-1338	-1	1338	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCCATTAATGGGTATA	-99068114	False	NA	NA	False	NA	NA	NA	99068126	99065917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99065900_99068100
WTC11_00068859	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2206	junction_5	81.1783016985861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	-99066685	False	NA	-59	True	CATAAA	-25	NA	99085216	99072185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
WTC11_00068860	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_5	224.622883963322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	-99070186	True	NA	NA	False	NA	NA	NA	99088717	99075224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
WTC11_00068863	chr4	-	489	4	FSM	ENSG00000197894.12	ENST00000502386.1	545	4	0	56	0	-56	multi-exon	FALSE	canonical	3	8	junction_3	1073.42535837384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAGAATACTTGAACC	-99070182	True	NA	NA	False	NA	NA	NA	99088713	99081974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99082117_99085114_99085217_99085413_99085634_99088688
WTC11_00068864	chr4	-	3510	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	20	-14	20	14	multi-exon	FALSE	canonical	3	9	junction_7	12.7471485406881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATTTCCTCACATTT	-99563724	True	NA	NA	False	AATAAA	-29	NA	99563997	99546694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
WTC11_00068865	chr4	-	3530	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	17	0	-1	multi-exon	FALSE	canonical	3	15	junction_7	10.7684345971673	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATGCATCAAAAAATAT	-99563766	True	NA	NA	False	AATAAA	-23	NA	99564039	99546727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
WTC11_00068866	chr4	-	802	6	FSM	ENSG00000145331.14	ENST00000514547.1	788	6	61	-75	6	57	multi-exon	TRUE	canonical	2	3	junction_5	16.7140659326209	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTCTTAAAATTGATAT	-99563389	False	273	NA	False	ATTAAA	-19	NA	99563662	99553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563557
WTC11_00068867	chr4	-	773	6	FSM	ENSG00000145331.14	ENST00000455368.6	802	6	29	0	22	0	multi-exon	FALSE	canonical	3	7	junction_5	15.1789327688082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTAGTAGATCACAACC	-99563428	False	NA	NA	False	AATATA	-39	NA	99563701	99553812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563557
WTC11_00068874	chr4	-	998	5	FSM	ENSG00000164031.17	ENST00000455208.5	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	69.0448223982074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTCCATGAGACACTTCA	NA	False	NA	NA	False	TTTAAA	-14	NA	99906597	99900634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906037_99906154_99906516
WTC11_00068881	chr4	-	866	5	FSM	ENSG00000164032.12	ENST00000296417.6	866	5	0	0	0	0	multi-exon	FALSE	canonical	3	11763	junction_4	418.38767907289	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-99816906	True	NA	-35	True	AATAAA	-15	NA	99950275	99948087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950167
WTC11_00068882	chr4	-	1880	2	FSM	ENSG00000164032.12	ENST00000511203.1	1880	2	0	0	0	0	multi-exon	FALSE	canonical	3	12396	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-99816930	True	NA	-35	True	AATAAA	-15	NA	99950299	99948087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948941_99949272
WTC11_00068883	chr4	-	1254	4	FSM	ENSG00000164032.12	ENST00000511319.5	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	11951	junction_1	364.566409130993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGATAAGTTCAATAAAGG	-99816899	True	NA	-67	True	NA	NA	NA	99950268	99948119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662
WTC11_00068885	chr4	-	5024	13	FSM	ENSG00000138814.17	ENST00000394853.8	3604	13	-277	-1143	-44	224	multi-exon	FALSE	canonical	3	25	junction_8	7.75806032459145	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAACAACCTCCTGTCC	-101343656	True	NA	NA	False	NA	NA	NA	101347604	101023184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_101026062_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
WTC11_00068886	chr4	-	2700	1	Genic_Genomic	ENSG00000138814.17	novel	NA	NA	NA	NA	132494	283	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGGATTCAAACTCAGT	-101025814	False	NA	NA	False	NA	NA	NA	101025825	101023125	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_101023100_101025800
WTC11_00068888	chr4	-	3151	9	FSM	ENSG00000138821.14	ENST00000356736.5	3152	9	0	1	0	-1	multi-exon	FALSE	canonical	3	136	junction_8	52.274366328058	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGTGTCATTTGTTA	-102342922	True	NA	-3	True	ATTAAA	-41	NA	102345482	102261666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
WTC11_00068889	chr4	-	3068	9	FSM	ENSG00000138821.14	ENST00000682227.1	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	85.8959217599998	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACCATGTATTGTG	-102345185	False	2560	-13	True	ATTAAA	-31	NA	102345207	102261676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345142
WTC11_00068891	chr4	-	3284	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	717	0	1	multi-exon	TRUE	canonical	3	135	junction_11	19.6284829711825	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATCTGTGGCTTATTT	-102758342	True	NA	-5	True	AATAAA	-30	NA	102760968	102631486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
WTC11_00068892	chr4	-	7444	17	FSM	ENSG00000109323.11	ENST00000514430.5	7444	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	52.311230570022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATCTGTGGCTTATT	-102758315	True	NA	-6	True	AATAAA	-29	NA	102760941	102631487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102690879_102690958_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
WTC11_00068893	chr4	-	3363	18	FSM	ENSG00000109323.11	ENST00000646727.1	3356	18	0	-7	0	0	multi-exon	FALSE	canonical	2	4	junction_8	51.2488332215905	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATCTGTGGCTTATT	-102758326	True	NA	-6	True	AATAAA	-29	NA	102760952	102631487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102670915_102671012_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
WTC11_00068895	chr4	-	566	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	16	0	4	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	-102758352	True	NA	NA	False	AATGAA	-20	NA	102760978	102753690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102753996_102760717
WTC11_00068897	chr4	-	4169	8	FSM	ENSG00000109332.20	ENST00000394804.6	4166	8	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	3212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102827930	False	NA	-1	True	ATTAAA	-18	NA	102827948	102794382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827591
WTC11_00068898	chr4	-	3961	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	-1593	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102827930	False	NA	-1	True	ATTAAA	-18	NA	102827948	102794382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
WTC11_00068899	chr4	-	3820	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	-1593	0	0	multi-exon	FALSE	canonical	1	491	junction_7	1067.21143401763	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102828141	False	NA	-1	True	ATTAAA	-18	NA	102828159	102794382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
WTC11_00068901	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	1199.11567755712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-102806631	True	NA	-66	True	NA	NA	NA	102827553	102797234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
WTC11_00068902	chr4	-	2174	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	-2	-1276	-2	0	multi-exon	TRUE	canonical	1	53	junction_7	1185.91247913295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102868182	True	NA	-16	True	AATAAA	-17	NA	102868877	102795975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
WTC11_00068917	chr4	-	606	3	FSM	ENSG00000164038.16	ENST00000510976.1	599	3	0	-7	0	7	multi-exon	FALSE	canonical	1	1	junction_1	7	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTATATTATACTGTCA	NA	False	NA	NA	False	TTTAAA	-23	NA	103044991	103042037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103042392_103043295_103043446_103044889
WTC11_00068918	chr4	-	491	4	FSM	ENSG00000164038.16	ENST00000515424.5	793	4	0	302	0	-302	multi-exon	FALSE	canonical	3	8	junction_2	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGATTGTTTCTTTGTC	-103067013	False	NA	NA	False	NA	NA	NA	103067499	103048892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103049021_103050239_103050383_103066326_103066508_103067460
WTC11_00068919	chr4	-	2898	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	22	0	-22	multi-exon	FALSE	canonical	3	284	junction_9	24.504471751141	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATGGGCTCCAACATT	-103096428	True	NA	NA	False	AATAAA	-27	NA	103099834	103077613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
WTC11_00068920	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	24.8215506163495	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096422	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
WTC11_00068922	chr4	-	578	7	FSM	ENSG00000164039.15	ENST00000504285.5	578	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	152.291387368645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGGCTTCCAGCG	-103096423	True	NA	NA	False	NA	NA	NA	103099829	103086505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103097635_103097755_103099782
WTC11_00068923	chr4	-	411	5	ISM	ENSG00000164039.15	ENST00000509245.1	616	6	46	1473	4	-282	5prime_fragment	FALSE	canonical	3	26	junction_3	143.496297861652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATCAGTTTGCCAAT	-103096418	True	NA	NA	False	AAGAAA	-2	NA	103099824	103092657	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
WTC11_00068925	chr4	-	8250	48	NIC	ENSG00000138778.14	novel	8541	49	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_32	36.6194999593766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGCTCTTCTATATAAT	-103196636	True	NA	-12	True	AATAAA	-18	NA	103198343	103105810	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
WTC11_00068926	chr4	-	8541	49	FSM	ENSG00000138778.14	ENST00000265148.9	8541	49	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	37.8395679059045	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGCTCTTCTATATAAT	-103196636	True	NA	-12	True	AATAAA	-18	NA	103198343	103105810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103139788_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
WTC11_00068928	chr4	-	1680	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	-15	0	-10	0	multi-exon	FALSE	canonical	3	439	junction_6	44.8396592462779	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	-105468514	True	NA	-11	True	AATAAA	-18	NA	105474077	105369076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
WTC11_00068929	chr4	-	1591	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	-177	0	11	multi-exon	TRUE	canonical	3	48	junction_6	155.354562211736	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCATTTTCATACTATAT	-105468501	True	NA	0	True	AATAAA	-29	NA	105474064	105369065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
WTC11_00068930	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	209.071758016237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-105468451	True	NA	-2	True	AATAAA	-21	NA	105474014	105369560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
WTC11_00068931	chr4	-	1394	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	-322	0	0	multi-exon	FALSE	canonical	3	20	junction_9	174.638674601781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	-105468504	True	NA	NA	False	NA	NA	NA	105474067	105369242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
WTC11_00068933	chr4	-	1356	9	FSM	ENSG00000138777.20	ENST00000509426.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	182.484930884717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGAGGGCTTTGTCT	-105468496	True	NA	NA	False	ATTAAA	-11	NA	105474059	105398303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105398868_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
WTC11_00068935	chr4	-	481	5	FSM	ENSG00000138777.20	ENST00000514209.5	481	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	266.558037770389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTTCAAACCGGGTTA	-105468496	True	NA	NA	False	AAAACA	-38	NA	105474059	105399150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105473893
WTC11_00068937	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	31.8070353852729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	-105468496	True	NA	0	True	AATAAA	-18	NA	105474059	105446201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
WTC11_00068941	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	55.9022470432969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-105706684	True	NA	-4	True	AATAAA	-17	NA	105708689	105682626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
WTC11_00068942	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	35.9768444048854	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	105709108	105682626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
WTC11_00068947	chr4	-	7304	17	FSM	ENSG00000145348.17	ENST00000510927.5	2826	17	0	-4478	0	-2	multi-exon	FALSE	canonical	3	55	junction_3	17.8356209591929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTGTTCTAATTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	106247722	106041600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138
WTC11_00068948	chr4	-	3313	24	FSM	ENSG00000145348.17	ENST00000361687.8	3312	24	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_23	27.3748742994585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGGATGTGTGTGTGTG	-106313287	True	NA	NA	False	AATAAA	-32	NA	106316230	106046078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106295093_106295167_106308767_106308990_106315930
WTC11_00068950	chr4	-	832	6	FSM	ENSG00000145348.17	ENST00000509532.5	848	6	16	0	-15	0	multi-exon	FALSE	canonical	3	31	junction_5	19.8635344286962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTGCACAGGGAATTT	-106313307	True	NA	NA	False	NA	NA	NA	106316250	106251983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
WTC11_00068951	chr4	-	2528	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	-15	0	15	multi-exon	FALSE	canonical	3	312	junction_6	37.3358666987759	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGCTTTGTTTCCGT	-107716537	True	NA	7	True	AATAAA	-36	NA	107720234	107613650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
WTC11_00068952	chr4	-	903	6	FSM	ENSG00000138801.9	ENST00000502431.5	903	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	151.655398848838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTTCTTCGTTGCTTT	-107719987	False	NA	NA	False	AAAACA	-36	NA	107720023	107659959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107719842
WTC11_00068953	chr4	-	492	3	FSM	ENSG00000138801.9	ENST00000504987.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	195	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGCTAAACTGTTTGC	-107716516	True	NA	NA	False	NA	NA	NA	107720213	107693839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_107694007_107701170_107701286_107720003
WTC11_00068956	chr4	-	1848	2	ISM	ENSG00000188517.17	ENST00000399126.1	2674	35	-153	476003	-44	1930	intron_retention	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTAAATCTTCCTTCA	-109302261	True	NA	NA	False	NA	NA	NA	109302796	109299878	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_109300653_109301722
WTC11_00068960	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	191.942699783034	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	-109698203	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
WTC11_00068961	chr4	-	1640	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	-6	0	0	multi-exon	FALSE	canonical	3	387	junction_2	32.3625297733866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	-109698229	True	NA	-20	True	AATAAA	-21	NA	109703445	109688621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
WTC11_00068967	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	6.16441400296898	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183687	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
WTC11_00068968	chr4	-	6454	5	FSM	ENSG00000170522.10	ENST00000394607.7	6454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.812182547417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183725	True	NA	0	True	AATAAA	-27	NA	110198653	110045845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198521
WTC11_00068972	chr4	-	613	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	12	326	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	20	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGCCACGCCATTAT	-110183675	True	NA	-15	True	AATAAA	-16	NA	110198603	110197564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_110197975_110198246_110198368_110198521
WTC11_00068973	chr4	-	2735	2	NNC	ENSG00000250103.3	novel	602	2	NA	NA	-247	-4558	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAATTGAATCTCAGAT	-110615481	False	407	NA	False	AATAAA	-31	NA	110615850	110607918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110610110_110615306
WTC11_00068974	chr4	-	4104	2	NNC	ENSG00000164093.18	novel	941	2	NA	NA	-320	71	intron_retention	FALSE	canonical	3	41	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGTTCCCTCTGCCTG	-110622043	False	NA	69	True	NA	NA	NA	110622054	110617351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110618689_110619287
WTC11_00068976	chr4	-	2316	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	-22	0	22	multi-exon	FALSE	canonical	3	36	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTCACTAACTTGGC	-110622708	True	NA	20	True	AGTAAA	-39	NA	110623077	110617400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110618689_110621163_110621370_110622255
WTC11_00068979	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	-112285692	True	NA	0	True	NA	NA	NA	112285904	112274536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112278435_112285639
WTC11_00068980	chr4	-	2745	10	FSM	ENSG00000138658.16	ENST00000506675.1	2279	10	-376	-90	-376	0	multi-exon	FALSE	canonical	3	73	junction_8	14.1970262926979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTTCTGTTTGCCAA	NA	False	NA	-5	True	AATAAA	-21	NA	112561914	112539338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732
WTC11_00068981	chr4	-	6654	28	FSM	ENSG00000138658.16	ENST00000505019.6	6648	28	0	-6	0	0	multi-exon	FALSE	canonical	3	11	junction_18	27.1252745840849	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTGCCAAAGAAAT	-112634035	True	NA	1	True	AATAAA	-27	NA	112636909	112539332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112603523_112603698_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
WTC11_00068982	chr4	-	6529	27	NIC	ENSG00000138658.16	novel	6648	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_26	20.7253453729583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAACACATGTAAAAATT	-112634024	True	NA	-14	True	ATTAAA	-22	NA	112636898	112539428	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
WTC11_00068984	chr4	-	444	6	NNC	ENSG00000249532.6	novel	389	3	NA	NA	-4789	54379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6049.02337902574	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATGAGAGGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	112654840	112592096	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_112592116_112639208_112639228_112646725_112646969_112647414_112647468_112648653_112648685_112654761
WTC11_00068989	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	9509	junction_2	2432.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112646290	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112646969_112647414_112647468_112648653
WTC11_00068990	chr4	-	296	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	3	-3	2	multi-exon	FALSE	canonical	3	7130	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112646294	True	NA	-16	True	AATAAA	-15	NA	112648703	112646722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112646969_112648653
WTC11_00068991	chr4	-	1054	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	-314	0	314	multi-exon	FALSE	canonical	3	64	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATTTGTATTCTTGTG	-112706197	True	NA	NA	False	AATAAA	-29	NA	112706810	112692732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112693686_112706709
WTC11_00068993	chr4	-	476	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	-29	-99	-29	99	mono-exon	FALSE	NA	NA	NA	NA	NA	918	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCATTTTGTCGTTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	113214422	113213946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113213900_113214400
WTC11_00068995	chr4	-	5988	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	-695	1	-213	-1	multi-exon	FALSE	canonical	3	38	junction_1	10.2548832152193	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCATGGCTCTGTGGT	-113762039	False	NA	-6	True	AATAAA	-20	NA	113762140	113451032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
WTC11_00068998	chr4	-	4601	2	FSM	ENSG00000180801.14	ENST00000315366.8	4603	2	0	2	0	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCTGGTGGCAC	-113979637	False	34	-9	True	AATAAA	-16	NA	113979647	113900285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113903676_113978436
WTC11_00069000	chr4	-	661	4	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	12.0277457017791	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATTTGTTTCTTTAA	-114493079	False	NA	8	True	TATAAA	-32	NA	114494448	114442498	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_114442683_114442963_114443206_114460003_114460105_114494314
WTC11_00069001	chr4	-	242	1	FSM	ENSG00000250442.1	ENST00000514461.1	639	1	-183	580	-183	-580	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATCCTGGCCACCCTG	NA	False	NA	NA	False	NA	NA	NA	116044228	116043986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_116044000_116044200
WTC11_00069002	chr4	-	2083	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	44	-104	44	104	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTGAAAAATAATACTTG	-117085371	True	NA	NA	False	NA	NA	NA	117085532	117083449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_117083400_117085500
WTC11_00069003	chr4	-	1329	1	FSM	ENSG00000213492.2	ENST00000441170.1	1663	1	77	257	12	-257	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGGAAATTTTAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	117576097	117574768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_117574800_117576100
WTC11_00069004	chr4	-	4809	13	FSM	ENSG00000164099.3	ENST00000296498.3	4809	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.69966214673719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTAAATTTTTGT	-118352993	False	NA	0	True	AATAAA	-22	NA	118353003	118280037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_118282244_118282830_118283112_118294938_118295062_118295777_118295857_118298732_118298939_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
WTC11_00069007	chr4	-	4018	23	FSM	ENSG00000150961.15	ENST00000280551.11	4018	23	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_18	33.0961846444047	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-118827149	True	NA	-1	True	AATAAA	-19	NA	118836126	118722822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
WTC11_00069008	chr4	-	4066	23	NNC	ENSG00000150961.15	novel	4018	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_18	66.5053903240088	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-118827194	True	NA	-1	True	AATAAA	-19	NA	118836171	118722822	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815159_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
WTC11_00069012	chr4	-	452	1	FSM	ENSG00000178636.8	ENST00000624134.1	423	1	42	-71	42	71	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCTAGGAAATAATTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	119195649	119195197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_119195200_119195600
WTC11_00069015	chr4	-	6967	21	FSM	ENSG00000138735.16	ENST00000354960.8	6959	21	0	-8	0	2	multi-exon	FALSE	canonical	3	69	junction_6	6.90362223763728	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTGATTATTAGGGG	-119626975	True	NA	1	True	AATAAA	-24	NA	119628804	119494394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
WTC11_00069019	chr4	-	5308	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	-71	-10	-61	10	multi-exon	FALSE	canonical	3	1253	junction_1	75.2944221041639	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGTCTACTCAATTT	-120049066	True	NA	-2	True	GATAAA	-27	NA	120066919	120055612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
WTC11_00069022	chr4	-	5442	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	-162	-2942	-150	34	multi-exon	FALSE	canonical	3	38	junction_9	17.4700910596554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTACCATTCTATGGTA	-120923001	False	NA	34	True	TATAAA	-44	NA	120923020	120691880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
WTC11_00069027	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4264860903284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	-120922851	False	218	NA	False	NA	NA	NA	120922870	120837344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
WTC11_00069030	chr4	-	1615	14	NNC	ENSG00000164111.15	novel	1638	13	NA	NA	0	32936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704.691984415467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACTTTACCTCTGTGGT	-121671531	True	NA	NA	False	AAAAAG	-11	NA	121696975	121635009	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_121635043_121667996_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
WTC11_00069031	chr4	-	1622	14	NNC	ENSG00000164111.15	novel	1638	13	NA	NA	0	32936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704.691984415467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACTTTACCTCTGTGGT	-121671536	True	NA	NA	False	AAAAAG	-11	NA	121696980	121635009	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_121635045_121667996_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
WTC11_00069032	chr4	-	1633	14	NNC	ENSG00000164111.15	novel	1638	13	NA	NA	0	32936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	704.691984415467	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACTTTACCTCTGTGGT	-121671548	True	NA	NA	False	AAAAAG	-11	NA	121696992	121635009	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_121635045_121667997_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
WTC11_00069033	chr4	-	2478	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	-840	0	840	multi-exon	FALSE	canonical	3	2244	junction_4	170.52881395497	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATATTTTCTGTAGGT	-121671536	True	NA	-76	True	NA	NA	NA	121696980	121667105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
WTC11_00069035	chr4	-	594	4	FSM	ENSG00000164111.15	ENST00000515717.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_3	190.704541692699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTTTCTGTCTTTTAT	-121672495	True	NA	NA	False	NA	NA	NA	121672558	121669311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121669725_121669953_121670013_121671546_121671643_121672532
WTC11_00069040	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_6	56.4113897892897	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	-121807770	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
WTC11_00069042	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	63.8638798986512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	-121867248	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
WTC11_00069044	chr4	-	3379	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	37	-2691	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.4412301024373	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATCCAGTGTTTATGG	-121867248	True	NA	NA	False	ATTAAA	-40	NA	121870450	121858602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
WTC11_00069045	chr4	-	239	1	FSM	ENSG00000237868.1	ENST00000413478.1	479	1	285	-45	285	45	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGACATGCCACCCCAAC	NA	False	NA	NA	False	NA	NA	NA	122078033	122077794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122077800_122078000
WTC11_00069046	chr4	-	1325	3	FSM	ENSG00000224786.3	ENST00000641807.2	1455	3	60	70	47	0	multi-exon	FALSE	canonical	2	4	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	-122732340	True	NA	NA	False	ACTAAA	-1	NA	122732414	122729580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122730636_122732051_122732194_122732286
WTC11_00069047	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.4165807559224	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-122921966	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
WTC11_00069048	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	20.017180121086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-122922762	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
WTC11_00069049	chr4	-	5306	3	FSM	ENSG00000170917.14	ENST00000513517.1	5306	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	25	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTCCGACTGAGTC	-122921966	True	NA	NA	False	AATAAA	-14	NA	122922597	122897525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122897679_122912567_122912624_122917500
WTC11_00069052	chr4	-	525	1	FSM	ENSG00000244021.4	ENST00000491435.2	481	1	-30	-14	-30	14	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAAGGACCTCT	-127813212	False	NA	NA	False	NA	NA	NA	127813230	127812705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127812700_127813200
WTC11_00069053	chr4	-	5075	11	FSM	ENSG00000164073.11	ENST00000642042.1	2303	11	35	-2807	0	3	multi-exon	FALSE	canonical	3	51	junction_2	11.9649488089168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACCTTAAGCTTTAAA	-127963085	True	NA	-17	True	AATAAA	-16	NA	127965145	127917810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
WTC11_00069056	chr4	-	4451	11	FSM	ENSG00000164073.11	ENST00000641186.1	4448	11	0	-3	0	3	multi-exon	FALSE	canonical	2	7	junction_7	25.0081986556409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACCTTAAGCTTTAAA	-127965205	False	NA	-17	True	AATAAA	-16	NA	127965322	127917810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
WTC11_00069061	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	21.2399576852012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	-127963088	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
WTC11_00069072	chr4	-	1422	7	FSM	ENSG00000164073.11	ENST00000641243.1	1422	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	23.4426012966897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTGACAACTTGGT	-127963111	True	NA	NA	False	ATTAAA	-21	NA	127965171	127932318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
WTC11_00069077	chr4	-	4349	2	FSM	ENSG00000164040.18	ENST00000394276.3	2858	2	-1476	-15	-1476	1	multi-exon	FALSE	canonical	3	580	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGAATGTTTCTCAT	NA	False	NA	-3	True	AATAAA	-27	NA	128274537	128269240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_128271414_128272361
WTC11_00069078	chr4	-	2836	3	FSM	ENSG00000164040.18	ENST00000296425.10	2769	3	0	-67	0	62	multi-exon	FALSE	canonical	3	506	junction_2	37	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTATTGTTCCTTTGT	-128277133	True	NA	63	True	NA	NA	NA	128287813	128269174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_128271414_128272361_128272518_128287372
WTC11_00069081	chr4	-	2141	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	-45	0	45	multi-exon	FALSE	canonical	3	17	junction_1	23.0008695487801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATCTTAGTATT	-129090859	False	NA	NA	False	NA	NA	NA	129093377	129036549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
WTC11_00069082	chr4	-	1081	6	NNC	ENSG00000151466.12	novel	2096	6	NA	NA	10	-1171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.1382909588054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATTCTGAAAATTTGT	-129091011	True	NA	-11	True	ATTAAA	-21	NA	129093529	129037765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_129038131_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
WTC11_00069083	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.951774464536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	-129091027	True	NA	NA	False	AATAAA	-25	NA	129093545	129039192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
WTC11_00069085	chr4	-	5274	1	NIC	ENSG00000254535.4	novel	4985	2	NA	NA	177	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAGCATGTTTGAAAAT	-134201104	False	NA	NA	False	AATAAA	-17	NA	134201612	134196338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_134196300_134201600
WTC11_00069086	chr4	-	256	1	FSM	ENSG00000241411.1	ENST00000459634.1	631	1	482	-107	482	107	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	134952407	134952151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_134952200_134952400
WTC11_00069090	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	48.3482735529983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529442	True	NA	-22	True	AATAAA	-18	NA	137532459	137519702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
WTC11_00069092	chr4	-	9649	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	-4	0	4	multi-exon	TRUE	canonical	2	9	junction_7	5.03377025451168	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTCATGTTTTGCTTTC	-138240046	True	NA	NA	False	AATAAA	-24	NA	138242349	138164092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
WTC11_00069093	chr4	-	3512	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	101	-1648	0	149	multi-exon	FALSE	canonical	3	56	junction_6	39.9819403675654	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGATTATATTTTATGCCA	-139084206	False	NA	NA	False	NA	NA	NA	139084224	139057070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
WTC11_00069094	chr4	-	4012	10	FSM	ENSG00000109381.21	ENST00000394235.6	4012	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	29.7993288515027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAATTCTGTCTCCTTT	-139175099	True	NA	49	True	AAGAAA	-35	NA	139177218	139057219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
WTC11_00069096	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	41.1315639813946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	-139084478	False	NA	-10	True	AATATA	-21	NA	139084496	139057854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
WTC11_00069099	chr4	-	445	1	FSM	ENSG00000179967.11	ENST00000509033.1	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	580	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCCCCGACCCAGGAGAA	-139115358	False	NA	NA	False	NA	NA	NA	139115374	139114929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139114900_139115400
WTC11_00069101	chr4	-	1230	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_1	6.34209919681348	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTTTTTCACTAAT	-139279890	True	NA	-5	True	AATAAA	-19	NA	139280225	139266158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
WTC11_00069103	chr4	-	1260	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	-3	0	3	multi-exon	FALSE	canonical	2	4	junction_5	2046.3555311822	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAATGTTAATTCTAA	-139301194	False	NA	-8	True	AATAAA	-43	NA	139301210	139289913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
WTC11_00069104	chr4	-	1806	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	-614	6	-404	-6	multi-exon	FALSE	canonical	3	76	junction_4	1780.41573445642	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACTTGTAGAAAATGT	-139301808	False	NA	-17	True	AATAAA	-44	NA	139301824	139289922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
WTC11_00069105	chr4	-	704	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	-8	0	-6	multi-exon	FALSE	canonical	2	10	junction_5	2044.88640271287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACTTGTAGAAAATGT	-139301468	True	NA	-17	True	AATAAA	-44	NA	139302477	139289922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
WTC11_00069106	chr4	-	681	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	74	6	0	-6	multi-exon	FALSE	canonical	1	4	junction_5	2047.57772990429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACTTGTAGAAAATGT	-139301468	True	NA	-17	True	AATAAA	-44	NA	139302477	139289922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
WTC11_00069107	chr4	-	862	5	FSM	ENSG00000109390.13	ENST00000539387.5	725	5	74	-211	0	211	multi-exon	FALSE	canonical	3	108	junction_4	1766.58659213184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAGTTCAAGACCAGCC	-139301468	True	NA	NA	False	NA	NA	NA	139302477	139289705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
WTC11_00069112	chr4	-	1514	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	76	0	76	0	multi-exon	FALSE	canonical	3	18	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	139556693	139532578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139533367_139546919_139547050_139556097
WTC11_00069113	chr4	-	411	1	FSM	ENSG00000178458.5	ENST00000230495.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	139698554	139698143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139698100_139698600
WTC11_00069115	chr4	-	347	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	2	129	-1	1	multi-exon	FALSE	canonical	3	29	junction_1	2.5	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGTACTTCATTTCTT	-140373259	True	NA	NA	False	AATAAA	-37	NA	140373404	140360810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_140360975_140369309_140369351_140373262
WTC11_00069116	chr4	-	300	1	FSM	ENSG00000241923.2	ENST00000476715.2	622	1	47	275	47	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAACAGAATAATCAAG	-140366803	False	NA	NA	False	TTTAAA	-14	NA	140366814	140366514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_140366500_140366800
WTC11_00069118	chr4	-	10433	7	FSM	ENSG00000170153.11	ENST00000515673.7	10432	7	0	-1	0	1	multi-exon	FALSE	canonical	1	6	junction_6	3.89087250997625	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGTGTCATCTG	-141133123	True	NA	NA	False	AATAAA	-13	NA	141133469	140859805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_140868380_140911143_140911355_140925976_140926074_140947653_140947737_140949300_140949373_140967622_140967874_141132324
WTC11_00069119	chr4	-	896	1	FSM	ENSG00000228981.3	ENST00000475555.1	843	1	-7	-46	-7	46	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAATAAAAAATGAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	143350124	143349228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_143349200_143350100
WTC11_00069122	chr4	-	1772	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	-904	0	321	multi-exon	FALSE	canonical	3	52	junction_4	79.8040569144201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGTATTATTACTTTC	-145094375	True	NA	NA	False	ATTAAA	-32	NA	145098213	144994253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
WTC11_00069123	chr4	-	1444	5	FSM	ENSG00000164162.14	ENST00000507656.6	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	41.1665823211012	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGAAATGTGGTTTTT	-145094358	True	NA	NA	False	ATTAAA	-15	NA	145098196	144994575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098119
WTC11_00069124	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.210622193997	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094351	True	NA	-27	True	AATAAA	-27	NA	145098189	144995157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
WTC11_00069127	chr4	-	876	6	NIC	ENSG00000164162.14	novel	963	7	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	106.494319097311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGGATTTGAAGCCA	-145094340	True	NA	-33	True	AATAAA	-21	NA	145098178	144995163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145098119
WTC11_00069128	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	106.867519231367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	-145094353	True	NA	-65	True	AATAAA	-31	NA	145098191	144995195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
WTC11_00069139	chr4	-	435	2	Antisense	novelGene_ENSG00000237136.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGTTAATATCCAAAATA	NA	False	NA	NA	False	NA	NA	NA	145703489	145698822	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_145699009_145703240
WTC11_00069140	chr4	-	434	2	Antisense	novelGene_ENSG00000237136.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	103	junction_1	0	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGTTAATATCCAAAATA	NA	False	NA	NA	False	NA	NA	NA	145703489	145698822	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_145698939_145703171
WTC11_00069141	chr4	-	1193	2	Antisense	novelGene_ENSG00000237136.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	402	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGAGCAGGAGGACAG	-145700555	False	NA	NA	False	NA	NA	NA	145700619	145699342	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_145700118_145700201
WTC11_00069142	chr4	-	7187	14	FSM	ENSG00000151612.18	ENST00000503462.3	7187	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.0047326079318	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACTCTAATTAAAAAA	-145938290	False	368	NA	False	NA	NA	NA	145938430	145757664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761599_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
WTC11_00069145	chr4	-	1952	1	FSM	ENSG00000279481.1	ENST00000623323.1	2525	1	-140	713	-140	-713	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCACATTCCCTAACCT	-145833109	False	NA	NA	False	NA	NA	NA	145833120	145831168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145831200_145833100
WTC11_00069154	chr4	-	10353	58	FSM	ENSG00000198589.14	ENST00000357115.9	10353	58	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	50.8652436058169	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-151015090	True	NA	-5	True	AATAAA	-32	NA	151015727	150264434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150597082_150597116_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015472
WTC11_00069156	chr4	-	10349	57	NIC	ENSG00000198589.14	novel	10148	57	NA	NA	-186	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	44.0198492739587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-151015431	False	NA	-5	True	AATAAA	-32	NA	151015470	150264434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321384_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
WTC11_00069163	chr4	-	5442	21	NIC	ENSG00000109686.19	novel	4888	20	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_10	40.3277509910979	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTCTCATACTAGAC	-151325755	False	NA	-5	True	AATAAA	-19	NA	151325774	151120283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151144219_151144289_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
WTC11_00069165	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	17.4872969768216	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-151759133	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
WTC11_00069167	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	91	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	-151759116	True	NA	NA	False	ATTAAA	-24	NA	151760990	151721945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151722216_151758771_151758923_151760806
WTC11_00069168	chr4	-	4138	11	FSM	ENSG00000109670.16	ENST00000296555.11	4301	11	163	0	163	0	multi-exon	FALSE	canonical	2	4	junction_10	22.1695737442108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATATATTTAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	152382366	152320543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152382188
WTC11_00069169	chr4	-	5653	12	FSM	ENSG00000109670.16	ENST00000603548.6	5653	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	15.8463698687279	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATATATTTAGTAT	-152534737	True	NA	NA	False	AATAAA	-17	NA	152536063	152320543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152534940
WTC11_00069170	chr4	-	5639	14	FSM	ENSG00000109670.16	ENST00000281708.10	5639	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	21.5708547616438	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATATATTTAGTAT	-152534766	True	NA	NA	False	AATAAA	-17	NA	152536092	152320543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152412479_152412530_152534940_152535034_152535126
WTC11_00069171	chr4	-	3606	2	FSM	ENSG00000109670.16	ENST00000603821.1	4279	2	673	0	673	0	multi-exon	FALSE	canonical	3	72	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	False	NA	-94	True	NA	NA	NA	152328400	152322818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152326232_152328207
WTC11_00069174	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	1	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	-152936652	True	NA	2	True	AATAAA	-16	NA	152936761	152934515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152935451_152936648
WTC11_00069176	chr4	-	2035	4	NNC	ENSG00000145423.5	novel	1996	3	NA	NA	0	45936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1337.24451350114	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCCAGACTTGGAGAAAA	-153736731	True	NA	NA	False	AATAAA	-5	NA	153789083	153734654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_153734695_153780591_153781756_153785863_153785945_153788333
WTC11_00069182	chr4	-	1692	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	-19	0	0	multi-exon	TRUE	canonical	3	24	junction_11	124.890584766288	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTCTGGCTGGGAATA	-154541352	True	NA	-47	True	ATTAAA	-40	NA	154550397	154536599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
WTC11_00069186	chr4	-	7304	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	27	-3	27	3	multi-exon	FALSE	canonical	3	18	junction_10	12.7692307692308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTTTATGTTTCCA	-155376911	False	NA	-21	True	AATAAA	-23	NA	155376938	155342654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
WTC11_00069187	chr4	-	7173	14	NIC	ENSG00000164114.19	novel	7328	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	9.84975895539023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-155375952	True	NA	-24	True	AATAAA	-20	NA	155376813	155342657	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376770
WTC11_00069193	chr4	-	3423	6	FSM	ENSG00000145431.11	ENST00000502773.6	4570	6	0	1147	0	13	multi-exon	FALSE	canonical	1	3	junction_5	3.38230690505755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGATTTATTTCTTG	-156971668	True	NA	10	True	AATAAA	-40	NA	156971799	156761600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_156763207_156767772_156767991_156772685_156772894_156810836_156811018_156850220_156850417_156970785
WTC11_00069198	chr4	-	1165	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	-6	0	6	multi-exon	FALSE	canonical	3	28	junction_2	60.4777277644883	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTGTTCTTTGATT	-163163135	False	NA	-1	True	AATAAA	-15	NA	163166752	163156957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
WTC11_00069202	chr4	-	2337	3	ISM	ENSG00000183439.9	ENST00000329314.6	1571	5	46	13776	46	152	5prime_fragment	FALSE	canonical	3	42	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGACTACTGCTATGT	-164976853	True	NA	NA	False	ATTAAA	-15	NA	164977611	164968221	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_164970340_164976687_164976826_164977530
WTC11_00069203	chr4	-	362	1	FSM	ENSG00000240674.1	ENST00000494303.1	480	1	130	-12	130	12	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAATAAATAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	165012715	165012353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_165012400_165012700
WTC11_00069210	chr4	-	3442	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	1	-3	0	3	multi-exon	FALSE	canonical	3	147	junction_1	63.5314882558248	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTTAATTTTATCTT	-169005841	True	NA	-2	True	AATAAA	-22	NA	169010254	168987586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
WTC11_00069216	chr4	-	5658	34	FSM	ENSG00000137601.18	ENST00000439128.6	5653	34	0	-5	0	5	multi-exon	FALSE	canonical	3	16	junction_17	7.58133128296334	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATTGTCTTTTATTTA	-169611309	True	NA	0	True	ATTAAA	-23	NA	169612612	169393269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169537808_169537912_169555719_169555852_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
WTC11_00069217	chr4	-	5541	35	FSM	ENSG00000137601.18	ENST00000511633.5	5536	35	1	-6	0	0	multi-exon	FALSE	canonical	2	6	junction_16	9.23384214888092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCAATTGTCTTTT	-169611323	True	NA	-5	True	ATTAAA	-18	NA	169612626	169393274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169508768_169508853_169537808_169537912_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
WTC11_00069218	chr4	-	5377	33	FSM	ENSG00000137601.18	ENST00000510533.5	5377	33	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	7.72753801349434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATGTTGAATTTATTA	-169611280	True	NA	-2	True	AATAAA	-20	NA	169612583	169393389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169537808_169537912_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
WTC11_00069221	chr4	-	1503	3	FSM	ENSG00000198948.12	ENST00000393702.7	1505	3	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_2	13	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTGAGTCACCTCA	-170027089	False	NA	-5	True	AATAAA	-14	NA	170027210	170004992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_170006011_170006602_170006737_170026859
WTC11_00069225	chr4	-	2118	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	-17	0	10	multi-exon	TRUE	canonical	3	38	junction_13	16.9597504726536	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACCCATTAATTCTAAG	-170089103	True	NA	NA	False	AATAAA	-29	NA	170090221	170060211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
WTC11_00069233	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1156.98714340307	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-173312234	True	NA	NA	False	NA	NA	NA	173334358	173331375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
WTC11_00069235	chr4	-	1321	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	-146	0	146	multi-exon	FALSE	canonical	3	155	junction_4	1089.88654799479	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACATGCTCATATTTGC	-173312267	True	NA	-31	True	ATTAAA	-2	NA	173334391	173331554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
WTC11_00069236	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	-173312308	True	NA	-14	True	AATAAA	-10	NA	173334432	173331704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173333215_173333499_173333670_173334271
WTC11_00069238	chr4	-	799	2	FSM	ENSG00000272870.4	ENST00000666010.2	812	2	12	1	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	-173369525	True	NA	-40	True	AATAAA	-13	NA	173369813	173363779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173364199_173369433
WTC11_00069241	chr4	-	317	1	FSM	ENSG00000234801.3	ENST00000447135.2	971	1	815	-161	815	161	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	173616091	173615774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173615800_173616100
WTC11_00069250	chr4	-	2230	2	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	141	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTTAC	-179170200	False	NA	-1	True	AATAAA	-24	NA	179170212	179166509	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_179168499_179169971
WTC11_00069251	chr4	-	1285	4	FSM	ENSG00000177822.9	ENST00000669431.1	1303	4	18	0	18	0	multi-exon	FALSE	canonical	2	6	junction_1	2.35702260395516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGGCAGAGCACCCG	-182084880	True	NA	NA	False	NA	NA	NA	182085113	181979581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_181980378_182012661_182012820_182081755_182081827_182084853
WTC11_00069253	chr4	-	4813	3	NIC	ENSG00000177822.9	novel	2260	4	NA	NA	28	2259	intron_retention	FALSE	canonical	1	1	junction_1	10.5	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCTCTGACCATGAAG	-182143795	True	NA	9	True	AATAAA	-34	NA	182144438	182138926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_182143546_182144046_182144141_182144338
WTC11_00069254	chr4	-	5300	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	-3040	0	2576	multi-exon	FALSE	canonical	3	22	junction_3	5.71547606649408	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTAAGATGACTGCTT	-182143823	True	NA	NA	False	NA	NA	NA	182144466	182138609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
WTC11_00069255	chr4	-	1356	2	FSM	ENSG00000177822.9	ENST00000511052.2	2082	2	-7	733	-7	0	multi-exon	FALSE	canonical	3	35	junction_1	0	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTCCCGAAGTTGCTAA	-182143865	False	NA	NA	False	NA	NA	NA	182143895	182142382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182143546_182143702
WTC11_00069257	chr4	-	2035	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	-64	-40	0	-4	multi-exon	FALSE	canonical	3	344	junction_5	75.687779726981	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTAATTTTCTGCTCCT	-182916972	False	NA	-17	True	NA	NA	NA	182917443	182890063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
WTC11_00069258	chr4	-	2184	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	41	-297	0	266	multi-exon	FALSE	canonical	3	139	junction_5	151.596306023597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCCTTTGCTGACTTC	-182915218	True	NA	NA	False	NA	NA	NA	182917345	182889793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
WTC11_00069271	chr4	-	2328	6	NIC	ENSG00000182552.15	novel	2590	7	NA	NA	120	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	66.8089814321398	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGATTTTTCTACACATT	-183657345	False	NA	-5	True	AATAAA	-15	NA	183659031	183639640	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183655880_183655962_183658928
WTC11_00069274	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	388.439263237497	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184636978	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
WTC11_00069276	chr4	-	2552	7	FSM	ENSG00000164305.19	ENST00000517513.5	964	7	-30	-1558	-22	-2	multi-exon	FALSE	canonical	3	48	junction_1	445.428913146269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATGTCTTTGAGTTTT	-184637008	True	NA	-4	True	AATATA	-17	NA	184649477	184627697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
WTC11_00069280	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	181.578114238054	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	-184723814	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
WTC11_00069287	chr4	-	4900	5	NIC	ENSG00000164323.15	novel	4851	5	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	97.829890626536	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-185198691	True	NA	-27	True	AATAAA	-15	NA	185203936	185159664	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203784
WTC11_00069288	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	25.8754167132173	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	-185422734	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
WTC11_00069291	chr4	-	788	5	FSM	ENSG00000168491.10	ENST00000510481.5	788	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.6393596310755	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGGCACTTACAAATGAA	-185471709	True	NA	NA	False	AATGAA	-30	NA	185471752	185459811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185470944_185471050_185471673
WTC11_00069292	chr4	-	2367	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	-21	312	-21	-312	multi-exon	FALSE	canonical	3	18	junction_1	9.54666899441312	1854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGACCCTCTGTCTCA	-185534595	True	NA	NA	False	NA	NA	NA	185535528	185500971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
WTC11_00069295	chr4	-	413	2	FSM	ENSG00000154556.18	ENST00000478461.1	420	2	7	0	7	0	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGTGGATTCCTACT	NA	False	NA	NA	False	NA	NA	NA	185589828	185587425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185587689_185589678
WTC11_00069296	chr4	-	873	9	FSM	ENSG00000154556.18	ENST00000451974.5	873	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	15.8424863894529	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAGCCAAATACAACTT	-185649565	False	NA	NA	False	NA	NA	NA	185649606	185614887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185614960_185615044_185615160_185618584_185618632_185620062_185620152_185626831_185627020_185630548_185630599_185635354_185635412_185646667_185646783_185649466
WTC11_00069298	chr4	-	593	6	FSM	ENSG00000154556.18	ENST00000490562.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	22.6327196774935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATCTTATTATGTTG	-185656695	True	NA	NA	False	NA	NA	NA	185656740	185630548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185630599_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185656614
WTC11_00069300	chr4	-	1790	12	FSM	ENSG00000154556.18	ENST00000470685.5	1790	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	14.936781380757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAATAAACCTGAATTT	-185812112	True	NA	NA	False	ATTAAA	-33	NA	185812238	185646616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226_185775367_185811663
WTC11_00069306	chr4	-	1163	1	FSM	ENSG00000279943.1	ENST00000623820.1	2459	1	-44	1340	-44	-1340	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAAATATGTTC	-186191513	False	NA	-33	True	NA	NA	NA	186191534	186190371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_186190400_186191500
WTC11_00069308	chr4	-	704	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	164	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247378	False	NA	-1	True	ATTAAA	-22	NA	186247435	186241993	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242333_186247070
WTC11_00069309	chr4	-	701	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	422	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247378	False	NA	-1	True	ATTAAA	-22	NA	186247435	186241993	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186247070
WTC11_00069310	chr4	-	750	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	47	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTTAGTGGTCTCT	-186247266	False	NA	-3	True	ATTAAA	-20	NA	186247323	186241995	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186245315_186245479_186247070
WTC11_00069311	chr4	-	533	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_2	44	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTAGTGGTCT	-186236962	True	NA	-5	True	ATTAAA	-18	NA	186247322	186241997	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186245315_186245479_186247284
WTC11_00069312	chr4	-	14776	27	FSM	ENSG00000083857.15	ENST00000441802.7	14776	27	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_26	78.8156038375906	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCTTTATGCCTCTTT	-186720235	True	NA	-11	True	AATAAA	-15	NA	186723856	186587793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_186589221_186595688_186595827_186596539_186597172_186597681_186597793_186597971_186598126_186599897_186600361_186601268_186601427_186602902_186603035_186603175_186603978_186604376_186604575_186606069_186606214_186609182_186609321_186609800_186610016_186611385_186611776_186613108_186613343_186614190_186614345_186617004_186617202_186617707_186621776_186628153_186628365_186628487_186628764_186633683_186633824_186636024_186636236_186636584_186636915_186639721_186639784_186663298_186663614_186706562_186709846_186723663
WTC11_00069316	chr4	-	1592	2	ISM	ENSG00000179046.9	ENST00000503141.1	1242	5	7542	-101	7542	0	3prime_fragment	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188093666	False	NA	-25	True	AATAAA	-14	NA	188093708	188091271	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_188091942_188092786
WTC11_00069317	chr4	-	2064	9	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	85.0403396924072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107631	True	NA	-25	True	AATAAA	-14	NA	188109597	188091271	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188098204_188098280_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
WTC11_00069318	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	56.9933759129882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107637	True	NA	-25	True	AATAAA	-14	NA	188109603	188091271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
WTC11_00069319	chr4	-	1981	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	52.1993822779933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGGAGCCTGATTTAAT	-188107625	True	NA	-27	True	AATAAA	-12	NA	188109591	188091273	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
WTC11_00069324	chr4	+	1916	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAAATAACCCATATATA	NA	False	NA	NA	False	AATGAA	-40	NA	265639	267555	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_265600_267600
WTC11_00069325	chr4	+	7128	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCATGGTGATGTGCAT	NA	False	NA	NA	False	AAAAAG	-1	NA	4032945	4040073	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4032900_4040100
WTC11_00069326	chr4	+	2167	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCAAGACTCTGTCTC	4546404	False	NA	NA	False	NA	NA	NA	4546415	4548582	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4546400_4548600
WTC11_00069327	chr4	+	524	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTTGTATTTAGTGAA	NA	False	NA	NA	False	NA	NA	NA	9066334	9066858	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_9066300_9066900
WTC11_00069328	chr4	+	234	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCACCTTTTCCCCCA	17000208	False	NA	NA	False	ACTAAA	-42	NA	17000249	17000483	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_17000200_17000500
WTC11_00069329	chr4	+	463	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTTGTTCCTGGCCCA	17000984	False	NA	NA	False	NA	NA	NA	17001025	17001488	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_17001000_17001500
WTC11_00069332	chr4	+	277	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATACAATGATTTTT	NA	False	NA	NA	False	NA	NA	NA	26283666	26283943	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_26283700_26283900
WTC11_00069333	chr4	+	6933	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGATATGTATGTGCTG	26436985	False	NA	NA	False	ATTAAA	-28	NA	26436995	26443928	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_26437000_26443900
WTC11_00069334	chr4	+	1913	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCACTTTCAATTCTGCA	NA	False	NA	NA	False	NA	NA	NA	44398836	44400749	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44398800_44400700
WTC11_00069335	chr4	+	4807	1	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGTACTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	44401036	44405843	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44401000_44405800
WTC11_00069336	chr4	+	220	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACCACATACTTGGAAGT	NA	False	NA	NA	False	AATATA	-37	NA	59184242	59184462	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_59184200_59184500
WTC11_00069338	chr4	+	3403	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGGCAACC	NA	False	NA	NA	False	AATAAA	-40	NA	67431287	67434690	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_67431300_67434700
WTC11_00069339	chr4	+	297	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGACTTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	72898621	72898918	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_72898600_72898900
WTC11_00069341	chr4	+	253	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAGAATGATTGATGA	NA	False	NA	NA	False	AAGAAA	-7	NA	78714265	78714518	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_78714300_78714500
WTC11_00069347	chr4	+	1618	1	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTGTCCTCACAAGATT	NA	False	NA	NA	False	NA	NA	NA	87935932	87937550	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87935900_87937600
WTC11_00069350	chr4	+	3183	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAGAA	92599042	False	NA	NA	False	AAAAAG	-18	NA	92599052	92602235	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92599100_92602200
WTC11_00069351	chr4	+	2098	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGTGTTCTAAGTTAC	NA	False	NA	NA	False	AATACA	-21	NA	92785072	92787170	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92785100_92787200
WTC11_00069354	chr4	+	267	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGGAAAGAAGGAAATAT	94294749	False	NA	NA	False	AATAAA	-22	NA	94294759	94295026	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94294800_94295000
WTC11_00069356	chr4	+	229	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTTCTTGGGCTGGGC	94298095	False	NA	NA	False	AGTAAA	-32	NA	94298105	94298334	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94298100_94298300
WTC11_00069358	chr4	+	788	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTTATTTTAACTAC	NA	False	NA	NA	False	AATAAA	-6	NA	101277360	101278148	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_101277400_101278100
WTC11_00069359	chr4	+	291	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTCTTGAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	101989162	101989453	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_101989200_101989500
WTC11_00069360	chr4	+	266	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGATTCTTTTACCA	NA	False	NA	NA	False	NA	NA	NA	102868101	102868367	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_102868100_102868400
WTC11_00069363	chr4	+	561	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACAGTTGAAAAAAAAATT	NA	False	NA	NA	False	TTTAAA	-44	NA	118554466	118555027	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118554500_118555000
WTC11_00069364	chr4	+	204	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTTTTATTTTGTA	NA	False	NA	NA	False	TATAAA	-16	NA	118555791	118555995	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118555800_118556000
WTC11_00069366	chr4	+	367	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGGCAAAGTAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	122075989	122076356	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_122076000_122076400
WTC11_00069370	chr4	+	227	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATGAGGCAATGTATC	NA	False	NA	NA	False	AATAGA	-10	NA	128257510	128257737	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_128257500_128257700
WTC11_00069371	chr4	+	269	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGGCCAGCCACTCCTT	NA	False	NA	NA	False	NA	NA	NA	132011146	132011415	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_132011100_132011400
WTC11_00069373	chr4	+	302	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	139178865	False	NA	NA	False	NA	NA	NA	139178977	139179279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_139179000_139179300
WTC11_00069377	chr4	+	2206	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	145766683	145768889	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145766700_145768900
WTC11_00069378	chr4	+	310	1	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTGCGTGCAGTGG	145836041	False	NA	NA	False	NA	NA	NA	145836068	145836378	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145836100_145836400
WTC11_00069379	chr4	+	675	1	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTCTTTTAAAACACA	145836564	False	NA	NA	False	ACTAAA	-2	NA	145836591	145837266	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145836600_145837300
WTC11_00069381	chr4	+	1324	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGCACTTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	151420094	151421418	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_151420100_151421400
WTC11_00069385	chr4	+	277	1	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161721007	161721284	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_161721000_161721300
WTC11_00069387	chr4	+	295	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTAATTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	164788491	164788786	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_164788500_164788800
WTC11_00069388	chr4	+	222	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTTAACTCTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	166525385	166525607	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_166525400_166525600
WTC11_00069390	chr4	+	237	1	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATAGCATAGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	175462637	175462874	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_175462600_175462900
WTC11_00069391	chr4	+	295	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCCCTGTCTCAGAAC	NA	False	NA	NA	False	GATAAA	-15	NA	177659694	177659989	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_177659700_177660000
WTC11_00069392	chr4	+	307	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCATCAAAATTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	181176771	181177078	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_181176800_181177100
WTC11_00069395	chr4	+	2002	1	FSM	ENSG00000289361.1	ENST00000688555.1	1549	1	-453	0	-453	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAATTGTCTGCTTTTGGC	NA	False	NA	NA	False	AATAAA	-21	NA	89486	91488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89500_91500
WTC11_00069397	chr4	+	580	1	FSM	ENSG00000275426.1	ENST00000618815.1	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATTTAAAGTCCTGCT	NA	False	NA	4	True	AATAAA	-19	NA	149737	150317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_149700_150300
WTC11_00069399	chr4	+	769	2	FSM	ENSG00000281016.1	ENST00000631198.1	753	2	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCCCTAATGAAACACA	385594	True	NA	NA	False	NA	NA	NA	386157	454070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_386312_453455
WTC11_00069401	chr4	+	1698	8	NIC	ENSG00000174227.16	novel	3909	13	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	42.7808845354167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTTGTATCATATTTT	496083	True	NA	NA	False	AATAAA	-15	NA	499290	539527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_533817_533982_539152
WTC11_00069403	chr4	+	1306	7	NIC	ENSG00000133256.13	novel	3294	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	23.8723456930585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	662990	True	NA	10	True	AATAAA	-16	NA	663718	670782	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_667942_670045
WTC11_00069404	chr4	+	1322	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10588	-549	-2	0	3prime_fragment	FALSE	canonical	0	0	junction_5	20.317616876877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	663039	True	NA	10	True	AATAAA	-16	NA	663767	670782	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
WTC11_00069405	chr4	+	815	8	NIC	ENSG00000215375.6	novel	1780	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	12.4654624904991	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	673771	True	NA	23	True	AATAAA	-15	NA	674558	682028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_674684_676072_676210_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
WTC11_00069406	chr4	+	2153	14	FSM	ENSG00000127415.13	ENST00000247933.9	2186	14	25	8	-22	-8	multi-exon	FALSE	canonical	1	3	junction_4	9.45747254726381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTACCAACGCCCCCT	986705	True	NA	18	True	AATATA	-29	NA	987021	1004521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881_1000990_1001467_1001564_1001678_1001882_1001981_1002162_1002268_1002486_1002731_1002945_1003035_1003158_1003344_1003471_1003548_1003626_1004011_1004113_1004259
WTC11_00069412	chr4	+	5121	20	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	79.1315045595016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGACTGAAGTGTGTGT	1871085	False	NA	23	True	AATATA	-28	NA	1871228	1979796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
WTC11_00069414	chr4	+	5221	23	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	90.6777055344462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGACTGAAGTGTGTGT	1869618	True	NA	23	True	AATATA	-28	NA	1871433	1979796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1892165_1892264_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
WTC11_00069415	chr4	+	7534	22	FSM	ENSG00000109685.19	ENST00000382891.9	7534	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.8413929832709	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATATGGGATTGTTTG	NA	False	NA	27	True	ATTAAA	-29	NA	1892781	1982206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1892892_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
WTC11_00069417	chr4	+	1648	3	FSM	ENSG00000109685.19	ENST00000678128.1	1651	3	3	0	3	0	multi-exon	FALSE	canonical	3	48	junction_2	94.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACGAAATTTAAAGATG	1938375	False	NA	NA	False	ATTAAA	-16	NA	1938406	1943735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1938533_1939653_1939779_1942338
WTC11_00069420	chr4	+	5487	12	NIC	ENSG00000087266.17	novel	2351	13	NA	NA	14	2755	intron_retention	FALSE	canonical	1	29	junction_8	21.7559719169148	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTCTTTTTTTTTTG	2817034	True	NA	13	True	AATAAA	-18	NA	2818198	2837044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
WTC11_00069422	chr4	+	5115	4	FSM	ENSG00000249673.8	ENST00000515194.6	5112	4	-3	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	8.25967446224258	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGATGGCAGCCCACAC	2933737	True	NA	NA	False	AAAACA	-14	NA	2934906	2951683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2938143_2938692_2938793_2946872_2947121_2950152
WTC11_00069423	chr4	+	3132	5	ISM	ENSG00000249673.8	ENST00000671608.1	2201	6	-1919	4020	1	-10	5prime_fragment	FALSE	canonical	2	3	junction_4	6.10327780786685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACAGGCACACAGCTTC	2933741	True	NA	NA	False	AATAAA	-26	NA	2934910	2947663	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2946872
WTC11_00069425	chr4	+	13406	67	NIC	ENSG00000197386.14	novel	13472	67	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	40.1658979385305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTTGCTGTGTGAGG	3069269	True	NA	27	True	ATTAAA	-19	NA	3074698	3243957	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888_3122937_3125548_3125630_3127263_3127605_3129923_3130000_3130304_3130424_3131285_3131398_3131637_3131776_3132561_3132721_3132813_3132912_3134400_3134541_3135903_3135968_3136225_3136327_3140509_3140657_3142765_3142887_3145151_3145229_3146796_3146949_3148004_3148208_3154292_3154420_3157071_3157200_3160281_3160393_3172319_3172398_3172907_3173132_3174720_3174800_3174945_3175108_3177331_3177388_3178297_3178447_3180514_3180652_3182353_3182471_3186596_3186720_3187650_3187887_3188950_3189094_3199731_3199940_3204006_3204149_3206495_3206676_3206806_3206984_3207280_3207358_3208772_3208912_3209826_3209950_3211928_3212143_3212563_3212710_3213957_3214136_3215109_3215212_3217764_3217953_3220181_3220309_3222386_3222488_3223405_3223561_3223991_3224132_3225660_3225744_3228614_3228746_3228879_3229010_3229886_3230043_3233162_3233354_3235283_3235399_3235564_3235779_3236148_3236255_3238446_3238610_3238817_3238979_3239845
WTC11_00069427	chr4	+	8905	34	ISM	ENSG00000197386.14	ENST00000681528.1	14033	68	136984	-4	0	0	3prime_fragment	FALSE	canonical	3	10	junction_7	39.1943662674553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTTGCTGTGTGAGG	3178330	True	NA	27	True	ATTAAA	-19	NA	3178346	3243957	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3178447_3180514_3180652_3182353_3182471_3186596_3186720_3187650_3187887_3188950_3189094_3199731_3199940_3202976_3203067_3204006_3204149_3206495_3206676_3206806_3206984_3207280_3207358_3208772_3208912_3209826_3209950_3211928_3212143_3212563_3212710_3213957_3214136_3215109_3215212_3217764_3217953_3220181_3220309_3222386_3222488_3223405_3223561_3223991_3224132_3225660_3225744_3228614_3228746_3228879_3229010_3229886_3230043_3233162_3233354_3235283_3235399_3235564_3235779_3236148_3236255_3238446_3238610_3238817_3238979_3239845
WTC11_00069428	chr4	+	623	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	3926770	True	NA	23	True	AATAAA	-25	NA	3927760	3933047	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3932659
WTC11_00069429	chr4	+	2643	6	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	7.73045923603508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATATGTTTCCTCTAGC	4289138	True	NA	NA	False	AATAAA	-16	NA	4290246	4321781	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4320639
WTC11_00069433	chr4	+	2418	6	FSM	ENSG00000247708.8	ENST00000610009.5	2406	6	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.7086164228309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACCAAAAGGGAATTCTG	4539562	True	NA	NA	False	AATAAA	-41	NA	4542191	4710938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4542476_4544737_4544908_4648976_4649110_4649372_4649543_4705672_4705911_4709515
WTC11_00069436	chr4	+	5103	19	FSM	ENSG00000013288.9	ENST00000285599.8	5129	19	-9	35	-9	-35	multi-exon	TRUE	canonical	2	8	junction_10	4.86642566628035	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGAGACTCCGTCTCA	6574735	True	NA	NA	False	NA	NA	NA	6575179	6623327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6575349_6576577_6576725_6578392_6578499_6586995_6587169_6589044_6589161_6593172_6593351_6594533_6594733_6597112_6597304_6598197_6598355_6600622_6600757_6605054_6605330_6609106_6609299_6609797_6610051_6610879_6610991_6611085_6611279_6614217_6614356_6617379_6617493_6619926_6620045_6621187
WTC11_00069437	chr4	+	7729	8	NIC	ENSG00000170871.12	novel	7854	10	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	7.78276484107213	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAACATAAGTTCCAT	6780738	True	NA	9	True	AATAAA	-16	NA	6782669	6884164	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6880786
WTC11_00069439	chr4	+	6210	28	NNC	ENSG00000184985.16	novel	6152	27	NA	NA	0	6781	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_27	4.35874159108882	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGCATGAAAGAGACCAC	7192144	True	NA	NA	False	NA	NA	NA	7192537	7749617	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_7193127_7396287_7396356_7531529_7531630_7638327_7638493_7654133_7654208_7661499_7661565_7664352_7664472_7667123_7667214_7676049_7676230_7682742_7682890_7689485_7689589_7697197_7697275_7703279_7703372_7704176_7704285_7712732_7712854_7714239_7714374_7715182_7715312_7718011_7718184_7723696_7723884_7725153_7725288_7726779_7726904_7728349_7728463_7729586_7729713_7733321_7733422_7734271_7734375_7737068_7737215_7740199_7742826_7749599
WTC11_00069440	chr4	+	2539	9	FSM	ENSG00000170801.10	ENST00000307358.7	2539	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	6.56577299333445	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCAGCCAGCAGGGC	8269548	True	NA	4	True	AATAAA	-14	NA	8269753	8307098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8270354_8282436_8282537_8286560_8286784_8291369_8291565_8292320_8292354_8294086_8294202_8302462_8302512_8304183_8304280_8305970
WTC11_00069441	chr4	+	2803	11	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	15.1657508881031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	8439406	True	NA	16	True	AATAAA	-20	NA	8440818	8476555	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8441442_8446475_8446591_8449697_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
WTC11_00069443	chr4	+	218	1	FSM	ENSG00000284636.1	ENST00000641589.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACGCGGGCGCAGG	9000802	False	NA	NA	False	NA	NA	NA	9000840	9001058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9000800_9001100
WTC11_00069444	chr4	+	300	1	FSM	ENSG00000284648.1	ENST00000641197.1	219	1	-35	-46	-35	46	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGGCTCAGTGGCCGGC	9532079	True	NA	NA	False	NA	NA	NA	9532393	9532693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9532400_9532700
WTC11_00069447	chr4	+	1742	2	Genic_Genomic	ENSG00000250896.1	novel	918	1	NA	NA	-3349	859	multi-exon	FALSE	canonical	1	1	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACAAAAGGGGCAACA	NA	False	NA	NA	False	AATAAA	-36	NA	11368625	11373751	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_11368662_11372045
WTC11_00069448	chr4	+	845	1	FSM	ENSG00000205940.8	ENST00000507090.2	2176	1	56	1275	56	-920	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTATAAGAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	13336537	13337382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_13336500_13337400
WTC11_00069449	chr4	+	1519	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_2	7.24568837309472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTCATATGGCTGT	15469726	True	NA	NA	False	AATAAA	-12	NA	15469864	15482257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
WTC11_00069450	chr4	+	1257	9	NIC	ENSG00000048342.18	novel	1121	8	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.4387320353287	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTGGCTTGAGGGTT	15469754	True	NA	7	True	ATTAAA	-35	NA	15469892	15511670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_15470058_15475914_15475972_15478722_15478807_15479218_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
WTC11_00069451	chr4	+	3443	15	FSM	ENSG00000048342.18	ENST00000651385.1	3427	15	-16	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_14	11.5186184687475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGAGGTTGTTTTTTTT	15478504	True	NA	NA	False	AATAAA	-11	NA	15479199	15540276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15538842
WTC11_00069453	chr4	+	1289	4	NNC	ENSG00000237765.8	novel	1136	4	NA	NA	0	216	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	98.323728344462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAACCATGAAGGGTTC	15679008	True	NA	NA	False	NA	NA	NA	15681822	15689312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_15681902_15686235_15686463_15686927_15687149_15688550
WTC11_00069455	chr4	+	3022	20	NIC	ENSG00000109805.10	novel	4587	21	NA	NA	17	-44	combination_of_known_splicesites	FALSE	canonical	3	37	junction_18	97.3027374470084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATGAAGATCTAAGTTA	17803106	True	NA	-94	True	AGTAAA	-19	NA	17810995	17843404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17842309_17842380_17843301
WTC11_00069456	chr4	+	8055	37	FSM	ENSG00000145147.20	ENST00000504154.6	8053	37	-2	0	-2	0	multi-exon	FALSE	canonical	2	13	junction_8	4.71666339484247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGTGGTGTTCTTAG	20249647	True	NA	20	True	ATTAAA	-20	NA	20251902	20620561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20253995_20256671_20256744_20257867_20257940_20268809_20268882_20467751_20467824_20480715_20480788_20486199_20486272_20488818_20488983_20491760_20491900_20510494_20510567_20511065_20511138_20519381_20519454_20523759_20523904_20524013_20524178_20525148_20525173_20528948_20529100_20531983_20532059_20533571_20533716_20539440_20539585_20541452_20541620_20542493_20542627_20546030_20546100_20548487_20548560_20549056_20549129_20550826_20550899_20553804_20553969_20567261_20567387_20567517_20567616_20568864_20569005_20589643_20589738_20595696_20595835_20596414_20596656_20598264_20598396_20610012_20610168_20616909_20617199_20617438_20617651_20618767
WTC11_00069457	chr4	+	8067	38	NIC	ENSG00000145147.20	novel	5132	39	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	6.76421210313419	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGTGGTGTTCTTAG	20249647	True	NA	20	True	ATTAAA	-20	NA	20251902	20620561	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_20253995_20256671_20256744_20257867_20257940_20268809_20268882_20467751_20467824_20480715_20480788_20486199_20486272_20488818_20488983_20490802_20490815_20491760_20491900_20510494_20510567_20511065_20511138_20519381_20519454_20523759_20523904_20524013_20524178_20525148_20525173_20528948_20529100_20531983_20532059_20533571_20533716_20539440_20539585_20541452_20541620_20542493_20542627_20546030_20546100_20548487_20548560_20549056_20549129_20550826_20550899_20553804_20553969_20567261_20567387_20567517_20567616_20568864_20569005_20589643_20589738_20595696_20595835_20596414_20596656_20598264_20598396_20610012_20610168_20616909_20617199_20617438_20617651_20618767
WTC11_00069459	chr4	+	811	4	FSM	ENSG00000163138.19	ENST00000502938.5	810	4	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.2089285540757	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAATTTTGAGGTTT	20699800	True	NA	NA	False	ATTAAA	-13	NA	20700457	20727542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20727284
WTC11_00069461	chr4	+	2163	3	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGGTGCACTTGAAGCA	24501302	False	NA	15	True	AATAAA	-21	NA	24501411	24508375	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24501574_24503271_24503560_24506662
WTC11_00069462	chr4	+	1326	3	NNC	ENSG00000109610.6	novel	1416	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	23	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGCGTCGAGGTCTTGG	24794917	True	NA	13	True	ATTAAA	-15	NA	24795572	24800842	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_24795652_24799505_24800529_24800618
WTC11_00069463	chr4	+	3810	10	NNC	ENSG00000038210.14	novel	3594	10	NA	NA	-84	147	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	58.2716075538815	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACCATGCCCGGCTA	25230912	True	NA	NA	False	NA	NA	NA	25233948	25279351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259051_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
WTC11_00069465	chr4	+	6970	12	ISM	ENSG00000168228.16	ENST00000302874.9	2797	13	10	-321	-1	321	intron_retention	FALSE	canonical	3	99	junction_7	21.4614780786952	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTAAATTCCAGGTAAG	25309459	True	NA	NA	False	NA	NA	NA	25312783	25370704	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021
WTC11_00069466	chr4	+	2552	28	ISM	ENSG00000053900.11	ENST00000510092.5	2599	29	119	1	55	-1	3prime_fragment	FALSE	canonical	3	47	junction_17	60.014835842998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTCATATTCTGCTT	25372335	False	NA	8	True	AATAAA	-11	NA	25377411	25418488	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
WTC11_00069467	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	490.833260136473	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26319506	True	NA	NA	False	NA	NA	NA	26319635	26431186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
WTC11_00069470	chr4	+	5847	11	NNC	ENSG00000168214.22	novel	5395	11	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	465.334976119354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAAGGGTCATATCTCT	26319502	False	NA	NA	False	TTTAAA	-42	NA	26320786	26435149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_26321049_26386352_26386392_26406174_26406272_26415476_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
WTC11_00069473	chr4	+	5610	12	NIC	ENSG00000168214.22	novel	1675	12	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	434.740770103383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	26322855	True	NA	21	True	AATAAA	-29	NA	26322883	26434923	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_26322951_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
WTC11_00069474	chr4	+	1718	2	NNC	ENSG00000168214.22	novel	1621	11	NA	NA	557	-22336	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCATTGGTAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	26343739	26345809	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_26344161_26344512
WTC11_00069475	chr4	+	1070	2	FSM	ENSG00000109689.19	ENST00000478425.1	407	2	-663	0	-16	0	multi-exon	FALSE	canonical	3	14	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	26857045	True	NA	9	True	ACTAAA	-19	NA	26857584	26858919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26858348_26858612
WTC11_00069476	chr4	+	623	3	NIC	ENSG00000109689.19	novel	726	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCCCCTGTGATTTG	26857061	True	NA	8	True	ACTAAA	-18	NA	26857600	26858918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_26857769_26858198_26858348_26858612
WTC11_00069478	chr4	+	1072	6	FSM	ENSG00000109689.19	ENST00000463501.5	1072	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	77.1061605839637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTCAGAAAAATCATA	26857388	False	NA	69	True	NA	NA	NA	26857927	27002394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26858348_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216
WTC11_00069479	chr4	+	5930	13	NIC	ENSG00000109689.19	novel	3613	13	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	66.4606713277359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTGCTGATTTTTG	26859636	True	NA	18	True	AATAAA	-18	NA	26860712	27023966	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27008427_27008529_27008763_27009003_27017710_27017985_27019399_27021613_27022518
WTC11_00069480	chr4	+	658	3	FSM	ENSG00000251129.3	ENST00000662669.1	1172	3	20	494	11	-382	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACCCTGGCTGGTCTTG	31997225	True	NA	NA	False	NA	NA	NA	31997395	32155329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_31997823_32146052_32146268_32155313
WTC11_00069481	chr4	+	2328	4	FSM	ENSG00000154274.15	ENST00000381980.9	3643	4	5	1310	5	374	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	37453886	True	NA	NA	False	NA	NA	NA	37453929	37592200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37454041_37558026_37558077_37588845_37588900_37590087
WTC11_00069484	chr4	+	5142	19	NNC	ENSG00000065882.17	novel	2977	17	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	67.5348104112535	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATGGTGGTTTTTT	37972027	True	NA	8	True	AATAAA	-22	NA	37977274	38139171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049860_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00069485	chr4	+	5431	21	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	96.6267431925551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATGGTGGTTTTTT	37972059	True	NA	8	True	AATAAA	-22	NA	37977306	38139171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38053105_38053226_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00069486	chr4	+	2977	17	FSM	ENSG00000065882.17	ENST00000510573.6	2977	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	97.7600498350425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTTTGTGTGGCGACT	38020641	True	NA	NA	False	NA	NA	NA	38020676	38137743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38053105_38053226_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00069489	chr4	+	3862	13	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-16	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	13.2056385263602	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCCTTTTCTGATTGC	38867070	True	NA	-8	True	ATTAAA	-4	NA	38867789	38945728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38943455
WTC11_00069490	chr4	+	6262	38	NNC	ENSG00000157796.18	novel	4395	37	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	13.9098632310284	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGACGTTTTTCTG	39181348	True	NA	12	True	AATAAA	-13	NA	39182495	39285809	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39273173_39274959_39276678_39276880_39277019_39277144_39278130_39278208_39278538_39278664_39285486
WTC11_00069492	chr4	+	1025	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	-14	0	-1	0	multi-exon	FALSE	canonical	3	119	junction_3	2.35702260395516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	39457719	True	NA	NA	False	NA	NA	NA	39459043	39464163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
WTC11_00069493	chr4	+	1006	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	52.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	39457719	True	NA	NA	False	NA	NA	NA	39459043	39464238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39463524
WTC11_00069494	chr4	+	1485	10	FSM	ENSG00000121897.15	ENST00000340169.7	1485	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	36.4796577848363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	39457784	True	NA	13	True	AATAAA	-45	NA	39459108	39477584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39477062
WTC11_00069495	chr4	+	2030	4	FSM	ENSG00000121897.15	ENST00000640816.1	2030	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	13.8162545173751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACAGTTGCTTGCTGT	39468859	False	NA	-20	True	NA	NA	NA	39468873	39477618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39470165_39471235_39471307_39473099_39473212_39477062
WTC11_00069496	chr4	+	1104	3	NNC	ENSG00000249348.2	novel	2787	5	NA	NA	63	1879	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.5	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTGGCCAATTTCT	39527728	False	NA	NA	False	NA	NA	NA	39528081	39534404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_39528339_39531968_39532131_39533719
WTC11_00069497	chr4	+	874	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	-3	0	0	0	multi-exon	FALSE	canonical	2	184	junction_1	280.993665409027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	39664870	True	NA	-5	True	AATAAA	-5	NA	39698135	39778607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
WTC11_00069499	chr4	+	3546	11	FSM	ENSG00000179299.17	ENST00000316607.5	3546	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	62.6277893590377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATATCTTATTATTTAA	40746735	True	NA	7	True	ATTAAA	-17	NA	40749924	40809985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40808306
WTC11_00069500	chr4	+	3433	11	NIC	ENSG00000179299.17	novel	4839	12	NA	NA	12	-81	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	60.5878700731425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTATGATTATCATTTC	40746747	True	NA	50	True	ATTAAA	-42	NA	40749936	40809904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40794374_40794477_40798786_40798905_40807060_40807185_40808306
WTC11_00069501	chr4	+	1604	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	44	33581	5	-72	5prime_fragment	FALSE	canonical	3	91	junction_6	33.543090031911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTCCTTGTTGCTT	40746779	True	NA	NA	False	NA	NA	NA	40749968	40776404	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
WTC11_00069505	chr4	+	1213	10	FSM	ENSG00000154277.13	ENST00000503431.5	917	10	-124	-172	-124	0	multi-exon	FALSE	canonical	1	51	junction_1	793.878353090807	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGCTGATTCTCATT	NA	False	NA	28	True	AATAAA	-20	NA	41256644	41268428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41256804_41256949_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
WTC11_00069506	chr4	+	874	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	-7	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	112.201895287568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	NA	False	NA	NA	False	AATGAA	-38	NA	41935121	41954122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
WTC11_00069508	chr4	+	2410	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	11552	-14	58	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	41975745	True	NA	23	True	AATAAA	-25	NA	41990487	42078909	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
WTC11_00069510	chr4	+	3977	16	FSM	ENSG00000151806.14	ENST00000506793.5	3970	16	-7	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	69.7590774658674	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCATGTGTAGAAGTAG	44671394	True	NA	93	True	TATAAA	-19	NA	44678419	44700759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_44678586_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
WTC11_00069511	chr4	+	3836	16	NIC	ENSG00000151806.14	novel	4460	17	NA	NA	0	-161	combination_of_known_splicesites	FALSE	canonical	3	42	junction_8	61.829299059768	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAATGTACACCTTACA	44671468	True	NA	NA	False	NA	NA	NA	44678493	44700518	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
WTC11_00069512	chr4	+	4025	16	NIC	ENSG00000151806.14	novel	4460	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	59.1754453581326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAGCTGTCTCAGAT	44671468	True	NA	13	True	AATAAA	-13	NA	44678493	44700679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_44678788_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
WTC11_00069513	chr4	+	561	1	FSM	ENSG00000272936.1	ENST00000610267.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGTCTTGTGATTAAC	44704389	False	NA	NA	False	AATAAA	-21	NA	44704404	44704965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_44704400_44705000
WTC11_00069517	chr4	+	1780	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	-24	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	313.031588677891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	48816418	True	NA	NA	False	AGTAAA	-44	NA	48831083	48861786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
WTC11_00069518	chr4	+	1915	8	FSM	ENSG00000109180.15	ENST00000425583.6	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	378.644197857868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTGATATTATGTTAAA	48830932	False	NA	NA	False	AATAAA	-19	NA	48831226	48861817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
WTC11_00069519	chr4	+	601	7	FSM	ENSG00000109184.15	ENST00000504113.5	594	7	-7	0	-7	0	multi-exon	FALSE	canonical	2	8	junction_6	107.37111136407	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTGAAGCGATTTCC	51840145	True	NA	NA	False	NA	NA	NA	51843123	51887190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51887122
WTC11_00069520	chr4	+	773	8	FSM	ENSG00000109184.15	ENST00000509068.5	805	8	32	0	-6	0	multi-exon	FALSE	canonical	2	3	junction_1	140.317860733466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTAGGCTGCACTA	51843467	False	NA	NA	False	NA	NA	NA	51843572	51891851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843743_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51887122_51887245_51891759
WTC11_00069523	chr4	+	4343	12	FSM	ENSG00000163071.11	ENST00000419395.6	2816	12	-121	-1406	-9	0	multi-exon	FALSE	canonical	2	6	junction_4	4.56902977204693	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAATGATGTCCTTTACC	NA	False	NA	12	True	AATAAA	-24	NA	52051294	52097299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52051792_52060418_52060525_52060781_52060898_52062219_52062333_52071916_52072157_52076778_52077041_52078734_52078894_52079743_52079920_52082386_52082511_52084915_52085000_52094526_52094573_52094879
WTC11_00069524	chr4	+	4439	13	FSM	ENSG00000163071.11	ENST00000295213.9	4430	13	-9	0	-9	0	multi-exon	FALSE	canonical	2	5	junction_4	4.93006648591635	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAATGATGTCCTTTACC	NA	False	NA	12	True	AATAAA	-24	NA	52051294	52097299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52051792_52060418_52060525_52060781_52060898_52062219_52062333_52069820_52069917_52071916_52072157_52076778_52077041_52078734_52078894_52079743_52079920_52082386_52082511_52084915_52085000_52094526_52094573_52094879
WTC11_00069525	chr4	+	507	5	FSM	ENSG00000226950.8	ENST00000676199.1	499	5	-8	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1313.69105481464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTATTAGTGCCGTG	52692916	True	NA	NA	False	AATATA	-38	NA	52712503	52717188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52716930
WTC11_00069526	chr4	+	2213	19	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-31	0	combination_of_known_junctions	TRUE	canonical	3	142	junction_1	122.028748383726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	NA	False	NA	29	True	AATAAA	-30	NA	53377609	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069527	chr4	+	1990	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_8	108.537346363155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370038	True	NA	29	True	AATAAA	-30	NA	53377652	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069528	chr4	+	1964	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	110.890857252626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370040	True	NA	29	True	AATAAA	-30	NA	53377654	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069529	chr4	+	2037	17	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_12	106.904089608396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370057	True	NA	29	True	AATAAA	-30	NA	53377671	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069530	chr4	+	1985	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_7	89.9054812319892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370082	True	NA	29	True	AATAAA	-30	NA	53377696	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069531	chr4	+	3044	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	121.877948682278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	53377818	False	NA	26	True	TATAAA	-36	NA	53377842	53460862	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00069538	chr4	+	313	1	FSM	ENSG00000242083.2	ENST00000470544.2	798	1	33	452	33	-452	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTGAGAAGAAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	56356167	56356480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56356200_56356500
WTC11_00069540	chr4	+	3368	18	NIC	ENSG00000174780.17	novel	3855	19	NA	NA	10	-436	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	139.98188216923	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGCATAATCCTTTTT	56460271	True	NA	-4	True	AATAAA	-9	NA	56467627	56503237	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
WTC11_00069543	chr4	+	509	2	Antisense	novelGene_ENSG00000289308.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAGACAGCTTCAAACA	NA	False	NA	NA	False	AGTAAA	-17	NA	61764214	61770049	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_61764365_61769690
WTC11_00069544	chr4	+	428	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	44	5	-5	-5	multi-exon	FALSE	canonical	3	16	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGCCTATGGTATTTTA	67700018	True	NA	1	True	ATTAAA	-16	NA	67701327	67730197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67701485_67728539_67728687_67730073
WTC11_00069545	chr4	+	2112	10	FSM	ENSG00000087128.10	ENST00000305363.9	2122	10	10	0	10	0	multi-exon	FALSE	canonical	2	3	junction_1	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGACATTATGATAT	68447225	True	NA	3	True	AATAAA	-15	NA	68447472	68497604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_68447524_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
WTC11_00069550	chr4	+	2698	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	-22	7	-22	-7	multi-exon	FALSE	canonical	2	24	junction_1	86.3802961071306	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAAAGTTGTCTCAGTGT	70993508	False	NA	13	True	AATAAA	-24	NA	70993540	71030907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
WTC11_00069551	chr4	+	724	3	FSM	ENSG00000109272.4	ENST00000226524.4	743	3	15	4	15	-4	multi-exon	FALSE	canonical	2	3	junction_1	1	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTCGACAGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	73853310	73854479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_73853463_73853782_73853910_73854034
WTC11_00069553	chr4	+	1198	3	NNC	ENSG00000250735.5	novel	777	4	NA	NA	-10	413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATCTACATTTTTAT	75401130	True	NA	NA	False	AATAAA	-14	NA	75401207	75423436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_75401337_75407894_75408106_75422578
WTC11_00069554	chr4	+	1392	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	-49	-688	2	156	multi-exon	FALSE	canonical	3	51	junction_2	6.64997911442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATCTGTGTTGTTAC	75513421	True	NA	NA	False	CATAAA	-8	NA	75514439	75522738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
WTC11_00069555	chr4	+	1571	8	NIC	ENSG00000189157.14	novel	1533	8	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	3.29501788419166	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTTTTCCCAGGTT	76251600	True	NA	NA	False	AATAAA	-30	NA	76251734	76283790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268814_76271567_76271769_76278068_76278225_76280263_76280342_76283380
WTC11_00069558	chr4	+	558	4	FSM	ENSG00000138771.16	ENST00000481002.5	554	4	-4	0	-4	0	multi-exon	FALSE	canonical	1	4	junction_1	51.4414445969611	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATGGAGAGCCTGGAGC	76585953	True	NA	NA	False	NA	NA	NA	76586250	76738835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_76586470_76710155_76710288_76730803_76730936_76738760
WTC11_00069559	chr4	+	15501	72	NIC	ENSG00000138759.20	novel	15871	74	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_13	26.5699885735588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	78056195	True	NA	25	True	AATAAA	-19	NA	78057329	78544269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
WTC11_00069560	chr4	+	6083	3	FSM	ENSG00000152785.8	ENST00000282701.4	6087	3	0	4	0	-4	multi-exon	FALSE	canonical	1	2	junction_2	1.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATTTTCAAATGGTAT	81030658	True	NA	NA	False	AATAAA	-16	NA	81030707	81057623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_81031601_81045737_81046649_81053344
WTC11_00069561	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	211.520897312771	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	83029863	True	NA	-27	True	NA	NA	NA	83035224	83075756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
WTC11_00069562	chr4	+	252	3	FSM	ENSG00000138678.11	ENST00000513683.1	627	3	0	375	0	-375	multi-exon	FALSE	canonical	2	3	junction_2	2	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAGTGAAATTACTCA	NA	False	NA	NA	False	AATGAA	-25	NA	83588257	83594960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83588300_83590198_83590293_83594844
WTC11_00069563	chr4	+	437	3	Antisense	novelGene_ENSG00000250546.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	54.5	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTATTAATCCCATTTT	NA	False	NA	NA	False	NA	NA	NA	83775357	83850498	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_83775393_83850065_83850229_83850259
WTC11_00069564	chr4	+	3278	5	FSM	ENSG00000180769.10	ENST00000652474.2	3278	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.48746859276655	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATACTTTCTCTACTG	NA	False	NA	-10	True	AATAAA	-3	NA	84965629	85008730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84965859_84969724_84969877_85000690_85000766_85004229_85004328_85006006
WTC11_00069565	chr4	+	7546	45	FSM	ENSG00000163629.13	ENST00000316707.10	7546	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	45.8572783682028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCCAAAACTGTGTGC	86594720	False	NA	11	True	AATAAA	-19	NA	86594731	86815149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
WTC11_00069566	chr4	+	9210	21	NIC	ENSG00000172493.23	novel	9261	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	23.68733838995	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTTGAATCCATGCTT	86927001	True	NA	11	True	AATAAA	-16	NA	86935058	87141039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
WTC11_00069567	chr4	+	463	4	FSM	ENSG00000172493.23	ENST00000511442.1	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8775904766351	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCAGTCCATTCACACT	86935283	False	NA	NA	False	NA	NA	NA	86936409	87046890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86936482_86948497_86948572_87046165_87046287_87046694
WTC11_00069569	chr4	+	2486	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	0	61	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	111.876207096441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTGTAATTATTTAATC	87419803	True	NA	64	True	AATAAA	-16	NA	87422572	87459516	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
WTC11_00069572	chr4	+	4884	14	NIC	ENSG00000118762.8	novel	5089	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	54.3343800192015	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	88005022	True	NA	8	True	AATAAA	-18	NA	88007610	88077777	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
WTC11_00069573	chr4	+	2496	5	ISM	ENSG00000118762.8	ENST00000237596.7	5089	15	-14	33256	-14	1137	5prime_fragment	FALSE	canonical	3	109	junction_1	16.976086121365	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTATCCAAAATGCTTA	88005032	True	NA	NA	False	ATTAAA	-15	NA	88007620	88044521	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232
WTC11_00069574	chr4	+	5415	9	ISM	ENSG00000118762.8	ENST00000508588.5	1720	10	6757	-1919	-2052	0	3prime_fragment	FALSE	canonical	3	173	junction_2	16.639091772089	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	NA	False	NA	8	True	AATAAA	-18	NA	88050017	88077777	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
WTC11_00069576	chr4	+	3671	4	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	12.2836838484589	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678152	True	NA	8	True	AATAAA	-18	NA	89681440	89694130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_89681685_89685412_89687003_89691284_89691406_89692414
WTC11_00069577	chr4	+	8882	2	NIC	ENSG00000251095.8	novel	2422	2	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	33	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCACCTTGAACTT	89678228	True	NA	4	True	AATAAA	-14	NA	89681516	89694126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_89681685_89685412
WTC11_00069578	chr4	+	2970	6	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	14.7431339951857	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCACCTTGAACTT	89678228	True	NA	4	True	AATAAA	-14	NA	89681516	89694126	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_89681685_89684444_89684490_89685412_89686232_89686897_89687003_89691284_89691406_89692414
WTC11_00069579	chr4	+	637	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	12	-1	-6	1	multi-exon	FALSE	canonical	2	38	junction_2	17	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTTCAAGTGGTTTTT	89678228	True	NA	8	True	AATAAA	-19	NA	89681516	89720173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89681685_89691284_89691406_89719825
WTC11_00069581	chr4	+	816	3	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	12	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTGGTGGTCTCTT	91621146	True	NA	NA	False	AATAAA	-21	NA	91623995	91629662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91626480_91626630_91629237
WTC11_00069583	chr4	+	663	2	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTGGTGGTCTCTT	91621150	True	NA	NA	False	AATAAA	-21	NA	91623999	91629662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91629237
WTC11_00069584	chr4	+	808	3	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	23	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	91621148	True	NA	NA	False	AATAAA	-18	NA	91623997	91629659	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91626480_91626630_91629240
WTC11_00069585	chr4	+	5860	2	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	84	junction_1	0	181	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGCAAGTCACAGGGC	NA	False	NA	NA	False	NA	NA	NA	91654611	91660513	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91659386_91659427
WTC11_00069587	chr4	+	5734	2	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGCAAGTCACAGGGC	NA	False	NA	NA	False	NA	NA	NA	91654611	91660513	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91659218_91659385
WTC11_00069588	chr4	+	9673	16	NNC	ENSG00000152208.13	novel	4844	14	NA	NA	134330	1345	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_15	10.8164483799238	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCGAATGGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	92438986	93775911	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_92442311_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
WTC11_00069589	chr4	+	351	2	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGCAGTTGACATTCC	92670422	False	NA	NA	False	AATAAA	-20	NA	92670436	92673996	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92670466_92673674
WTC11_00069591	chr4	+	413	1	FSM	ENSG00000248750.2	ENST00000505161.2	445	1	-166	198	-166	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTGGTGACATTTGGT	92884486	False	NA	NA	False	NA	NA	NA	92884496	92884909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_92884500_92884900
WTC11_00069594	chr4	+	1876	12	FSM	ENSG00000163110.15	ENST00000627587.2	1853	12	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.0139320117034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTCCAGCTTTAAA	94448299	True	NA	NA	False	NA	NA	NA	94451919	94664186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94451996_94455246_94455385_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
WTC11_00069595	chr4	+	548	4	NIC	ENSG00000163110.15	novel	743	4	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	72.2403396079134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTATAATGATTTACA	94448301	True	NA	10	True	AATAAA	-21	NA	94451921	94549977	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
WTC11_00069596	chr4	+	2508	15	FSM	ENSG00000138698.15	ENST00000453712.6	2470	15	-38	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	40.9123004306848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTTTCTCCTTTTTC	98259090	True	NA	12	True	AATAAA	-24	NA	98261430	98442666	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421257_98421395_98433935_98434063_98436939_98437069_98441989
WTC11_00069597	chr4	+	1374	3	FSM	ENSG00000246090.8	ENST00000670724.1	1412	3	38	0	4	0	multi-exon	FALSE	canonical	1	1	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTAGAAGCACCCTCCTG	99088392	True	NA	NA	False	AATATA	-34	NA	99088842	99155234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_99089285_99133554_99133806_99154553
WTC11_00069599	chr4	+	1091	3	NNC	ENSG00000254531.2	novel	822	2	NA	NA	-1013	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	NA	False	NA	25	True	AATAAA	-15	NA	101346738	101348883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_101347048_101347787_101348010_101348323
WTC11_00069603	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	2	10	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	102828033	False	NA	-21	True	NA	NA	NA	102828054	102844075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102828186_102843323
WTC11_00069604	chr4	+	2440	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	-27	-1561	-27	675	multi-exon	FALSE	canonical	2	4	junction_1	466.739994239	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTGACTCTGGGTGCT	102860246	True	NA	10	True	GATAAA	-17	NA	102868946	102889242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
WTC11_00069606	chr4	+	416	2	ISM	ENSG00000248740.7	ENST00000668077.1	774	4	130	28693	126	-28693	internal_fragment	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTCTCATATGCCTG	103255681	False	NA	NA	False	NA	NA	NA	103255951	103343164	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_103256295_103343091
WTC11_00069607	chr4	+	288	2	ISM	ENSG00000248740.7	ENST00000657481.2	940	3	11899	502	11857	17	3prime_fragment	FALSE	canonical	2	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTAGCAGTCTGAGAAG	NA	False	NA	24	True	AATAAA	-33	NA	103436931	103453772	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_103437047_103453599
WTC11_00069608	chr4	+	4558	12	FSM	ENSG00000168743.13	ENST00000379987.7	4561	12	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	1.37870462619119	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGTCTATTCTTGTTT	105895439	True	NA	NA	False	AATAAA	-37	NA	105895473	105971671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_105895724_105897900_105898002_105927335_105927429_105937008_105937129_105938300_105938421_105940074_105940210_105940513_105940637_105942306_105942703_105958470_105958558_105959027_105959127_105967187_105967445_105968894
WTC11_00069612	chr4	+	5965	7	FSM	ENSG00000138796.18	ENST00000640752.2	5955	7	-10	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	31.7700068198503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGGCAGAAGCTATT	107983024	True	NA	10	True	AGTAAA	-7	NA	107989836	108035157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108027761_108033175_108033293_108034238
WTC11_00069613	chr4	+	1507	7	FSM	ENSG00000138796.18	ENST00000639698.1	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	125.001333326222	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAATTGTAATACACTC	107983240	False	NA	-35	True	NA	NA	NA	107990052	108035112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108033175_108033293_108034238
WTC11_00069614	chr4	+	2882	4	FSM	ENSG00000138796.18	ENST00000510728.6	2948	4	0	66	0	1	multi-exon	FALSE	canonical	2	4	junction_1	179.634814739979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTCTTCTTTGACCT	108026053	False	NA	28	True	AGTAAA	-25	NA	108026063	108035175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108027761_108027938_108028070_108033175_108033293_108034238
WTC11_00069615	chr4	+	2303	2	FSM	ENSG00000109475.17	ENST00000503574.1	2627	2	0	324	0	-324	multi-exon	FALSE	canonical	3	25255	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGAGATGATGGACAAC	108452944	True	NA	NA	False	NA	NA	NA	108620625	108623008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108622025_108622104
WTC11_00069617	chr4	+	5174	24	NIC	ENSG00000138802.11	novel	4066	25	NA	NA	104	198	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	28.5831787882459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCATTTATTTAATTG	109433904	False	NA	NA	False	AAGAAA	-20	NA	109433918	109541094	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
WTC11_00069619	chr4	+	1343	7	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_1	136.135247293108	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109815481	False	NA	18	True	AATAAA	-18	NA	109815634	109824737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
WTC11_00069620	chr4	+	513	3	FSM	ENSG00000138798.13	ENST00000502723.1	683	3	170	0	170	0	multi-exon	FALSE	canonical	1	2	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTCAGTACAAC	NA	False	NA	NA	False	NA	NA	NA	109940945	109943972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109941146_109943253_109943436_109943841
WTC11_00069621	chr4	+	382	3	FSM	ENSG00000138798.13	ENST00000511228.5	567	3	185	0	149	0	multi-exon	FALSE	canonical	1	2	junction_1	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGGTAAGAGAAAAGGGC	NA	False	NA	NA	False	NA	NA	NA	109980825	109987855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109980976_109983421_109983542_109987743
WTC11_00069625	chr4	+	377	1	FSM	ENSG00000248697.1	ENST00000514955.1	1862	1	717	768	717	-768	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTTGATTATTACCA	NA	False	NA	NA	False	NA	NA	NA	112456640	112457017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112456600_112457000
WTC11_00069629	chr4	+	3691	7	NIC	ENSG00000174607.11	novel	3733	6	NA	NA	145	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.021294137057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598866	False	NA	NA	False	AATAAA	-17	NA	114598951	114678225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_114598975_114619422_114619526_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
WTC11_00069630	chr4	+	877	2	FSM	ENSG00000269893.9	ENST00000665363.2	901	2	24	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267149	True	NA	20	True	AATAAA	-21	NA	118278754	118279823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118279432_118279623
WTC11_00069632	chr4	+	571	3	NNC	ENSG00000154608.14	novel	4587	17	NA	NA	47511	-16062	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	55.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTCTTTTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	118515100	118538038	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118515367_118523318_118523446_118537860
WTC11_00069633	chr4	+	5203	6	NNC	ENSG00000260404.4	novel	4395	10	NA	NA	24035	1272	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	7.1442284397967	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTGAGTTTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	118619946	118635001	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118620077_118620413_118620611_118621462_118621528_118628035_118628227_118630288_118630347_118630439
WTC11_00069634	chr4	+	1169	1	FSM	ENSG00000251155.2	ENST00000513445.2	186	1	129	-1112	129	1112	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAACCAGGCGT	118640791	False	NA	NA	False	NA	NA	NA	118640801	118641970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118640800_118642000
WTC11_00069635	chr4	+	506	4	FSM	ENSG00000145390.12	ENST00000514305.5	504	4	-2	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGACTTGGTTTTCCTT	119209647	True	NA	NA	False	AATATA	-10	NA	119212740	119220211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119220115
WTC11_00069636	chr4	+	1489	10	FSM	ENSG00000245958.7	ENST00000689183.1	1492	10	3	0	1	0	multi-exon	FALSE	canonical	3	15	junction_6	39.5805164689727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	119451308	True	NA	58	True	AATAAA	-22	NA	119454796	119499974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119488644_119488718_119493332_119493438_119494432_119494524_119497810_119497904_119499560
WTC11_00069639	chr4	+	5363	2	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCCCT	119990964	False	NA	20	True	AATAAA	-20	NA	119994135	119999628	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_119994264_119994393
WTC11_00069646	chr4	+	3019	1	ISM	ENSG00000145375.9	ENST00000274008.5	8116	16	393204	133	382863	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAGAATGTGAGGTTA	NA	False	NA	13	True	AATAAA	-28	NA	123316281	123319300	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_123316300_123319300
WTC11_00069647	chr4	+	2608	3	FSM	ENSG00000164056.11	ENST00000610581.4	2608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	123392025	True	NA	13	True	AATATA	-19	NA	123396794	123403760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_123396933_123397610_123397857_123401536
WTC11_00069648	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	123399458	False	NA	8	True	AATATA	-14	NA	123399509	123403755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_123399795_123401536
WTC11_00069653	chr4	+	5751	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	2	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_6	20.7583651143876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTATCTCAATGTTGC	127963959	True	NA	NA	False	AATAAA	-14	NA	127965405	128039951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
WTC11_00069655	chr4	+	3981	12	NIC	ENSG00000138709.19	novel	3105	12	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	45.9394139281959	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	128061189	False	NA	18	True	ATTAAA	-22	NA	128061227	128123869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
WTC11_00069658	chr4	+	5644	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGTCAATGATTAGT	132123051	True	NA	19	True	AATAAA	-27	NA	132123800	132132622	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_132124000_132127177
WTC11_00069675	chr4	+	761	2	FSM	ENSG00000237136.8	ENST00000510096.1	211	2	0	-550	0	550	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGACGCCAGACAGTG	145732429	False	NA	NA	False	NA	NA	NA	145732453	145771582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145732620_145770987
WTC11_00069677	chr4	+	990	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	-5	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	7629.28904682474	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081747	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
WTC11_00069678	chr4	+	11369	13	NIC	ENSG00000164142.16	novel	11517	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	8.92989672703753	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	151404483	True	NA	40	True	ATTAAA	-17	NA	151409215	151670503	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_151409466_151482523_151482649_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
WTC11_00069680	chr4	+	533	3	FSM	ENSG00000151962.8	ENST00000512640.1	526	3	-7	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTAAGCCTGGATAA	154781781	True	NA	NA	False	NA	NA	NA	154781809	154798058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_154781933_154796741_154796904_154797810
WTC11_00069695	chr4	+	1383	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	270	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCATTTTTGATCATTT	166705707	True	NA	6	True	ATTAAA	-10	NA	166716456	166736648	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_166716724_166725235_166725320_166735616
WTC11_00069696	chr4	+	10074	4	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	253	junction_2	128.221163099804	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTTTGATCATTTATA	166705707	True	NA	9	True	ATTAAA	-13	NA	166716456	166736651	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_166716724_166721972_166722079_166725235_166725320_166727034
WTC11_00069697	chr4	+	11683	2	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	564	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTTTGATCATTTATA	166705707	True	NA	9	True	ATTAAA	-13	NA	166716456	166736651	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_166716724_166725235
WTC11_00069699	chr4	+	2192	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	282	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCGGATCTCTCAGCAGA	166705707	True	NA	NA	False	NA	NA	NA	166716456	166745277	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_166716724_166725235_166725320_166743436
WTC11_00069707	chr4	+	4435	12	NIC	ENSG00000164118.13	novel	3824	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16	junction_1	28.6142771969542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTTGTTTCATGCCAT	174282450	True	NA	13	True	AATAAA	-14	NA	174283969	174320327	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_174284141_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
WTC11_00069715	chr4	+	2160	4	NIC	ENSG00000218336.9	novel	651	3	NA	NA	0	1033	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	16.3299316185545	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCATCTATTGTTTTT	182143319	True	NA	8	True	AATAAA	-40	NA	182144689	182351349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144755_182323945_182324253_182346650_182346930_182349840
WTC11_00069724	chr4	+	904	3	FSM	ENSG00000164306.11	ENST00000509538.5	804	3	0	-100	0	100	multi-exon	FALSE	canonical	3	42	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGACGGGTGGATCA	184648347	True	NA	NA	False	NA	NA	NA	184649755	184657754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_184649909_184652022_184652101_184657081
WTC11_00069738	chr4	+	2816	14	NIC	ENSG00000109794.14	novel	6015	14	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	12.7548575269403	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACTGTAAAGAGAGTGAA	186104454	True	NA	10	True	AATAAA	-21	NA	186104715	186172147	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_186105643_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
WTC11_00069749	chr4	-	657	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	0	37657	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_1	45.2621990922521	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACCTACATCAGAATTTA	-299871	True	NA	-9	True	AATAAA	-8	NA	305474	233017	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_233285_295437_295534_296028_296156_305307
WTC11_00069750	chr4	-	376	1	FSM	ENSG00000272885.1	ENST00000609771.1	420	1	-90	134	-90	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAGTTTACATATT	NA	False	NA	NA	False	AATATA	-10	NA	416627	416251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_416300_416600
WTC11_00069752	chr4	-	1803	4	FSM	ENSG00000251595.7	ENST00000514396.5	1423	4	0	-380	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.382490938237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	-465618	False	NA	NA	False	AATAAA	-21	NA	474051	425434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_426974_437445_437512_472574_472702_473980
WTC11_00069754	chr4	-	781	1	FSM	ENSG00000242686.4	ENST00000598370.1	411	1	-423	53	106	52	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACCAACTTGTTTTTT	-653540	False	NA	-8	True	NA	NA	NA	653683	652902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_652900_653700
WTC11_00069756	chr4	-	393	3	FSM	ENSG00000169020.10	ENST00000515202.5	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	15251	junction_2	159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-674109	False	NA	-29	True	AATAAA	-21	NA	674121	672435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_673911
WTC11_00069758	chr4	-	2772	1	FSM	ENSG00000272588.1	ENST00000607877.1	719	1	-936	-1117	-936	1117	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAATTCTGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	758676	755904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_755900_758700
WTC11_00069759	chr4	-	2595	2	FSM	ENSG00000249592.7	ENST00000660016.1	2617	2	0	22	0	-22	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGTGAAGGGCAGTCC	-780719	True	NA	NA	False	AAGAAA	-20	NA	781849	760223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_762741_781771
WTC11_00069760	chr4	-	2281	2	FSM	ENSG00000178950.18	ENST00000502799.1	2281	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTCTCCAGTGTGGA	-851659	False	NA	-2	True	ATTAAA	-16	NA	851673	849275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891
WTC11_00069761	chr4	-	4575	29	NNC	ENSG00000178950.18	novel	4461	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	78.0947472037417	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTACAGAATTAAACTA	-926879	True	NA	-34	True	NA	NA	NA	932365	849307	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877349_877479_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
WTC11_00069763	chr4	-	2322	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	0	13	0	-13	multi-exon	FALSE	canonical	2	4	junction_1	2.16595429884644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAAATATATTCTTCC	-1113445	True	NA	NA	False	GATAAA	-7	NA	1113562	1071490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
WTC11_00069765	chr4	-	2341	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	24	12	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	337.169408275044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCTGGTGACTTTCTC	-1248664	False	4372	-3	True	AATAAA	-30	NA	1248716	1211432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
WTC11_00069767	chr4	-	785	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	61	7	-2	-7	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCACTCCGGCTCTGGT	-1580296	True	NA	-14	True	NA	NA	NA	1580466	1574068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1574545_1580157
WTC11_00069768	chr4	-	200	2	FSM	ENSG00000174137.14	ENST00000467215.1	811	2	611	0	611	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATGAGGATGACACCCCA	NA	False	NA	NA	False	AAAAAG	-27	NA	1644342	1641561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1641608_1644188
WTC11_00069769	chr4	-	3214	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_3	140.537855714711	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721317	False	NA	-5	True	AATAAA	-17	NA	1721331	1715951	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720229
WTC11_00069770	chr4	-	549	4	FSM	ENSG00000130997.16	ENST00000511777.1	566	4	17	0	5	0	multi-exon	TRUE	canonical	3	6	junction_1	1.24721912892465	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCTTGTCTGAGTGAA	NA	False	NA	-3	True	AGTAAA	-19	NA	2081036	2071959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2072300_2072967_2073030_2075451_2075520_2080957
WTC11_00069771	chr4	-	4115	13	FSM	ENSG00000159733.14	ENST00000290974.7	4114	13	0	-1	0	1	multi-exon	FALSE	canonical	2	7	junction_4	3.41565025531987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTCCTTTCTTCCATG	-2418131	True	NA	-17	True	CATAAA	-19	NA	2418645	2269595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452_2339656_2341477_2341616_2353932_2354074_2418284
WTC11_00069774	chr4	-	1813	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	495	junction_11	126.257574848448	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	-2927332	True	NA	-10	True	AATAAA	-16	NA	2934815	2930567	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
WTC11_00069775	chr4	-	854	3	NIC	ENSG00000251669.6	novel	1209	6	NA	NA	7	-68	intron_retention	FALSE	canonical	3	14	junction_2	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTCCCCCAACGTGGA	-3954563	False	NA	NA	False	AATAAA	-18	NA	3955356	3942978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_3943373_3953110_3953174_3954959
WTC11_00069776	chr4	-	902	5	NIC	ENSG00000251669.6	novel	987	8	NA	NA	1	-111	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	16.9908063375462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTTCTTTGTGCA	-3954621	True	NA	NA	False	CATAAA	-27	NA	3955414	3943021	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_3943373_3947741_3948008_3948089_3948221_3953110_3953174_3955323
WTC11_00069777	chr4	-	869	3	FSM	ENSG00000251669.6	ENST00000502255.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGAGCCATGCCCTGT	-3952383	False	NA	NA	False	NA	NA	NA	3953176	3947498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3948221_3951138_3951220_3953110
WTC11_00069779	chr4	-	272	1	FSM	ENSG00000250476.1	ENST00000514456.1	627	1	28	327	28	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGCAGAGCACCTC	NA	False	NA	NA	False	NA	NA	NA	3967632	3967360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3967400_3967600
WTC11_00069780	chr4	-	594	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	22	6153	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATTATTTTT	-4107480	False	NA	-22	True	AATAAA	-26	NA	4107561	4101126	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4101439_4107279
WTC11_00069781	chr4	-	9255	3	FSM	ENSG00000168818.10	ENST00000515687.5	1183	3	-8072	0	-5282	0	multi-exon	FALSE	canonical	3	203	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAACAGGCAGGGGGTGT	NA	False	NA	NA	False	GGGGCT	-33	NA	4431895	4419333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420130_4420863_4420945_4423517
WTC11_00069783	chr4	-	2035	12	NIC	ENSG00000152969.20	novel	2585	13	NA	NA	15	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	8.31209414593634	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	-6199755	True	NA	1	True	AATAAA	-20	NA	6200534	6053754	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6112721_6112998_6200252
WTC11_00069785	chr4	-	2291	16	FSM	ENSG00000163995.21	ENST00000407564.7	2291	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.20256347070045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTAGATGCCTACACAAT	-8158542	True	NA	NA	False	NA	NA	NA	8158783	7966358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7967104_7983263_7983345_7983546_7983555_8008058_8008201_8009049_8009103_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
WTC11_00069788	chr4	-	2434	17	NIC	ENSG00000087008.16	novel	2253	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	16.7737704467421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	-8427531	True	NA	-25	True	AAGAAA	-24	NA	8428486	8366711	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
WTC11_00069789	chr4	-	1380	3	FSM	ENSG00000288075.1	ENST00000659603.1	1440	3	0	60	0	-60	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGACCGGTGCCAGTGC	-9151379	False	NA	-6	True	AATAAA	-29	NA	9151418	9034578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_9035546_9064241_9064331_9151094
WTC11_00069790	chr4	-	4822	18	Fusion	ENSG00000261490.1_ENSG00000071127.17	novel	3142	15	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_9	676.476255730734	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGTGATTAATTCT	-10116727	False	NA	NA	False	AATAAA	-44	NA	10116949	10068088	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_10069148_10069675_10069825_10071245_10071374_10073990_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083174_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
WTC11_00069792	chr4	-	6756	2	FSM	ENSG00000178163.8	ENST00000507515.1	527	2	0	-6229	0	7	multi-exon	FALSE	canonical	3	17	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTATGCAGGTGACTTTAT	-10456310	True	NA	-4	True	AATAAA	-35	NA	10457405	10439872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10446540_10457316
WTC11_00069793	chr4	-	210	1	FSM	ENSG00000273133.1	ENST00000609724.1	556	1	252	94	252	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTTATCCCTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	15564001	15563791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15563800_15564000
WTC11_00069798	chr4	-	2398	8	NIC	ENSG00000169744.13	novel	2384	8	NA	NA	2	4	intron_retention	FALSE	canonical	3	51	junction_2	59.4869219034825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCTGGCTATTTGTGT	-16893519	True	NA	-3	True	AATAAA	-22	NA	16898658	16501536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16508534_16508684_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00069799	chr4	-	2540	9	NIC	ENSG00000169744.13	novel	2476	9	NA	NA	0	4	intron_retention	FALSE	canonical	3	15	junction_2	72.4948274016843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCTGGCTATTTGTGT	-16893521	True	NA	-3	True	AATAAA	-22	NA	16898660	16501536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16505839_16505983_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
WTC11_00069800	chr4	-	281	3	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	4	junction_1	302.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCGTGCAAACCGATA	NA	False	NA	NA	False	NA	NA	NA	16975285	16930970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16931020_16975022_16975080_16975110
WTC11_00069801	chr4	-	4405	3	NNC	ENSG00000163257.11	novel	4547	3	NA	NA	0	52149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACACAAGAGGATTAAAGT	-17802538	True	NA	NA	False	NA	NA	NA	17810711	17748505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_17748533_17800658_17804772_17810446
WTC11_00069802	chr4	-	5038	19	NNC	ENSG00000152990.14	novel	4577	19	NA	NA	-486	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_12	69.5071716701251	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	NA	False	NA	-2	True	AATAAA	-21	NA	22516552	22387375	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438396_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
WTC11_00069803	chr4	-	2870	12	FSM	ENSG00000152990.14	ENST00000502482.1	2870	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_5	25.530082725423	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTATTTTTGTATACT	-22512293	True	NA	NA	False	AATAAA	-20	NA	22515997	22420037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
WTC11_00069804	chr4	-	2126	1	Genic_Genomic	ENSG00000251292.1	novel	NA	NA	NA	NA	8547	355	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	NA	False	NA	NA	False	ATTAAA	-23	NA	23725032	23722906	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_23722900_23725000
WTC11_00069805	chr4	-	663	2	NNC	ENSG00000251292.1	novel	639	4	NA	NA	6069	353	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	23727510	23722908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_23723332_23727270
WTC11_00069806	chr4	-	657	2	NNC	ENSG00000251292.1	novel	639	4	NA	NA	6072	353	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	23727507	23722908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_23723329_23727270
WTC11_00069807	chr4	-	495	3	NNC	ENSG00000289201.1	novel	800	2	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	3	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATAGTGCTTATGAAGG	-24472914	True	NA	-4	True	ATTAAA	-17	NA	24473138	24469024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24469297_24472374_24472465_24473005
WTC11_00069808	chr4	-	3023	15	NNC	ENSG00000109606.13	novel	2998	14	NA	NA	0	2052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	337.920833622194	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATTCCCTAAGCATA	-24548931	True	NA	NA	False	NA	NA	NA	24584554	24515388	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24515417_24527477_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
WTC11_00069809	chr4	-	5374	1	FSM	ENSG00000207697.1	ENST00000384964.1	99	1	-2511	-2764	-2511	2764	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAGTTGTGTTATTTT	-24522754	False	NA	0	True	ATTAAA	-24	NA	24522801	24517427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24517400_24522800
WTC11_00069811	chr4	-	469	2	FSM	ENSG00000240005.6	ENST00000467484.1	482	2	-1	14	-1	-11	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTCATCCAAACTAGTT	-26860495	True	NA	-11	True	AATAAA	-15	NA	26860600	26859819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_26860029_26860340
WTC11_00069812	chr4	-	3651	8	NNC	ENSG00000181826.10	novel	3617	7	NA	NA	-20	78341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.64252335719729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATCAACACTTTCT	-37685604	True	NA	NA	False	NA	NA	NA	37686396	37512458	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_37512474_37610634_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
WTC11_00069813	chr4	-	952	1	ISM	ENSG00000181826.10	ENST00000454158.7	3617	7	74790	1	53795	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTTGTCTTGTGGGTG	NA	False	NA	-4	True	AATAAA	-13	NA	37611586	37610634	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_37610600_37611600
WTC11_00069816	chr4	-	4849	14	NNC	ENSG00000121892.15	novel	7131	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.537045488332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTGTGGAGCCCTG	-39874377	False	NA	NA	False	AATAAA	-20	NA	39874400	39822862	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39825489_39837477_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288
WTC11_00069818	chr4	-	531	1	FSM	ENSG00000250568.1	ENST00000510152.1	315	1	27	-243	27	243	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATTAATGTTTTATAG	-39972655	False	NA	NA	False	AATAAA	-8	NA	39973415	39972884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39972900_39973400
WTC11_00069819	chr4	-	5447	7	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_3	116.845577104522	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40630186	False	NA	-17	True	AATAAA	-17	NA	40630200	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40629395
WTC11_00069820	chr4	-	4712	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	137.111876461037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40630160	False	NA	-17	True	AATAAA	-17	NA	40630174	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630107
WTC11_00069821	chr4	-	5406	8	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	121	junction_4	120.59833822932	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40630166	False	NA	-17	True	AATAAA	-17	NA	40630180	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40423693_40423713_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40629395
WTC11_00069822	chr4	-	4878	7	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_3	110.259794223562	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40626517	True	NA	-17	True	AATAAA	-17	NA	40630698	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462
WTC11_00069823	chr4	-	4676	6	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	141.703069832661	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40626519	True	NA	-17	True	AATAAA	-17	NA	40630700	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40426144_40432650_40432863_40437770_40438925_40466576_40466700_40544421_40544507_40630462
WTC11_00069824	chr4	-	4951	7	FSM	ENSG00000163694.15	ENST00000510871.5	4951	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	152.86568178197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-40629850	False	4181	NA	False	AAGAAA	-43	NA	40629864	40423680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40426144_40432650_40432863_40436440_40436886_40437770_40438925_40466576_40466700_40544421_40544507_40629395
WTC11_00069825	chr4	-	3708	18	FSM	ENSG00000163697.17	ENST00000295974.12	8972	18	125	5139	0	147	multi-exon	FALSE	canonical	0	0	junction_10	76.9524186785862	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGGAAATATCATTGATA	-41212311	True	NA	NA	False	NA	NA	NA	41214493	40815165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
WTC11_00069830	chr4	-	8213	36	FSM	ENSG00000124406.16	ENST00000264449.14	8209	36	0	-4	0	0	multi-exon	FALSE	canonical	2	17	junction_30	8.17032959642913	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAAGTTTTGATTGCT	-42655764	True	NA	0	True	AATAAA	-19	NA	42657093	42408372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594363_42600477_42600519_42616032_42616079_42624535_42624635_42625613_42625714_42626994_42627110_42656824
WTC11_00069832	chr4	-	712	1	FSM	ENSG00000273369.1	ENST00000610260.1	441	1	-125	-146	-125	146	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTACTTTTAACAATG	NA	False	NA	NA	False	TTTAAA	-37	NA	44694511	44693799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44693800_44694500
WTC11_00069833	chr4	-	225	2	FSM	ENSG00000109158.11	ENST00000509316.1	487	2	106	156	63	-156	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACGATTTCAAACGCGC	-46993425	False	NA	NA	False	NA	NA	NA	46993442	46992825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_46992947_46993338
WTC11_00069835	chr4	-	4865	3	ISM	ENSG00000170448.12	ENST00000502448.5	1760	7	23135	0	-3361	0	intron_retention	FALSE	canonical	3	134	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	NA	False	NA	0	True	ATTAAA	-16	NA	47855569	47847239	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_47848337_47851094_47851149_47851855
WTC11_00069838	chr4	-	11523	64	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_63	10.9788500031784	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTTGTATTTTAAC	-48777320	True	NA	-1	True	AATAAA	-17	NA	48780293	48497566	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
WTC11_00069839	chr4	-	3772	2	NIC	ENSG00000075539.15	novel	1940	12	NA	NA	-277	17604	intron_retention	FALSE	canonical	3	48	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCTGGGATTACAGGC	NA	False	NA	NA	False	NA	NA	NA	48606123	48599999	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_48603389_48605740
WTC11_00069840	chr4	-	773	8	NNC	ENSG00000145247.12	novel	1109	7	NA	NA	0	99172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1007.63596844196	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGAAGCACCTGATCA	-48881314	True	NA	NA	False	AAAAAG	-2	NA	48906774	48785846	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48785874_48885381_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
WTC11_00069841	chr4	-	4622	8	FSM	ENSG00000109189.13	ENST00000451218.6	4622	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_7	60.1223242860006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTTTCTAGAGAA	-52655566	True	NA	-14	True	AATAAA	-16	NA	52659290	52594177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52659114
WTC11_00069843	chr4	-	2761	4	NNC	ENSG00000226887.8	novel	2744	4	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	19.0146142626022	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	-52750225	True	NA	-13	True	AATAAA	-24	NA	52751624	52743516	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_52745944_52750709_52750830_52750929_52751070_52751550
WTC11_00069844	chr4	-	693	2	Antisense	novelGene_ENSG00000250302.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCAGTCATCTAATTTG	-52861907	True	NA	-1	True	AATAAA	-19	NA	52862187	52861142	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_52861732_52862083
WTC11_00069845	chr4	-	213	1	FSM	ENSG00000244422.3	ENST00000484463.3	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGACACACTGATCTAAA	NA	False	NA	NA	False	NA	NA	NA	54976371	54976158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54976200_54976400
WTC11_00069846	chr4	-	10370	23	NIC	ENSG00000134852.15	novel	10470	23	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	12.3446545463115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTCCCTTTCTTTTA	-55546772	False	NA	2	True	ATTAAA	-21	NA	55546806	55427902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55486392_55486550_55489373_55489466_55546781
WTC11_00069847	chr4	-	867	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-167	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_9	91.9344909013149	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-55636855	False	NA	-55	True	NA	NA	NA	55636865	55595283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
WTC11_00069848	chr4	-	3483	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	-3	0	3	multi-exon	FALSE	canonical	2	3	junction_12	21.1763516645924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTACACTTGATTAGA	-56387498	False	NA	NA	False	ATTAAA	-31	NA	56387508	56338283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
WTC11_00069849	chr4	-	2949	13	FSM	ENSG00000157426.14	ENST00000503808.5	2949	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	25.8757715934338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATGAAATGTTGCTG	-56386181	True	NA	NA	False	NA	NA	NA	56387459	56338604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
WTC11_00069850	chr4	-	1199	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	23	0	-23	multi-exon	FALSE	canonical	3	68	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATAAAAATATATTCAAT	-56386194	True	NA	NA	False	TATAAA	-27	NA	56387472	56381781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56382598_56384069_56384342_56387361
WTC11_00069851	chr4	-	782	4	FSM	ENSG00000163453.11	ENST00000514062.2	1251	4	1	468	1	-468	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAATTCCCAAGGACAGG	-57110349	True	NA	NA	False	NA	NA	NA	57110384	57032505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_57032553_57033194_57033312_57040823_57040934_57109876
WTC11_00069856	chr4	-	2193	1	FSM	ENSG00000272986.1	ENST00000609599.1	745	1	-1519	71	-1519	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAGGAAGTTGTACT	NA	False	NA	-68	True	NA	NA	NA	70706010	70703817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70703800_70706000
WTC11_00069857	chr4	-	1751	10	FSM	ENSG00000132463.15	ENST00000502323.5	1794	10	43	0	43	0	multi-exon	FALSE	canonical	1	2	junction_9	214.860735832467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGCTTAGTGTAAAT	-70830786	False	NA	NA	False	TTTAAA	-16	NA	70838958	70820311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70838868
WTC11_00069858	chr4	-	2382	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	-617	0	0	multi-exon	FALSE	canonical	2	8	junction_9	213.053867876845	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831171	False	NA	-4	True	AATAAA	-32	NA	70839343	70819757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
WTC11_00069860	chr4	-	7768	33	NNC	ENSG00000132466.20	novel	7734	33	NA	NA	-11975	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.6912643023947	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATATTGGATGATATT	NA	False	NA	-27	True	ATTAAA	-15	NA	73235089	73075237	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73234980
WTC11_00069861	chr4	-	5632	24	NIC	ENSG00000132466.20	novel	3259	19	NA	NA	1	1627	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	58.9072514399689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTCTGAGTAGTGTGA	-73249109	True	NA	-4	True	AATAAA	-24	NA	73258797	73111456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73113312_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
WTC11_00069863	chr4	-	868	3	FSM	ENSG00000163737.5	ENST00000687529.1	715	3	-123	-30	-123	30	multi-exon	FALSE	canonical	3	13	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAAAAATTGTGTTGACA	-73982140	False	NA	19	True	AATAAA	-38	NA	73982150	73981043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73981292_73981416_73981544_73981657
WTC11_00069864	chr4	-	540	3	FSM	ENSG00000163736.4	ENST00000296028.4	1307	3	145	622	145	-622	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTCTAATTCTTGCCT	-73988035	False	NA	NA	False	AATAAA	-13	NA	73988045	73987060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73987375_73987516_73987653_73987955
WTC11_00069866	chr4	-	300	2	FSM	ENSG00000081041.9	ENST00000510048.1	568	2	0	268	0	-268	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTCGCCCATCGCTG	-74099086	True	NA	NA	False	NA	NA	NA	74099196	74098798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_74098923_74099020
WTC11_00069868	chr4	-	783	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42488	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTGGCATCTGTATA	-75126515	True	NA	-2	True	AATAAA	-35	NA	75127205	75081924	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127065
WTC11_00069870	chr4	-	415	1	FSM	ENSG00000201644.2	ENST00000364774.2	94	1	-414	93	-414	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTCTGATGGTAGTGGG	NA	False	NA	NA	False	NA	NA	NA	75662627	75662212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75662200_75662600
WTC11_00069871	chr4	-	532	6	FSM	ENSG00000138744.16	ENST00000513045.6	532	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	17.8437664185564	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCTTAAAAAATAAGACA	NA	False	NA	NA	False	AATGAA	-15	NA	75925811	75914304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75914339_75914867_75914986_75919908_75919976_75920737_75920801_75920950_75921124_75925734
WTC11_00069872	chr4	-	1721	10	Fusion	ENSG00000138744.16_ENSG00000198301.12	novel	734	8	NA	NA	14	-2	multi-exon	FALSE	canonical	3	5	junction_1	12.9109007441267	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTTACCAAGTAGTGT	-75940557	True	NA	NA	False	AATAAA	-17	NA	75940997	75916439	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_75917115_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
WTC11_00069874	chr4	-	3993	1	FSM	ENSG00000186212.4	ENST00000334306.4	3993	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTGATTACTGTTTT	-76897995	True	NA	-29	True	ATTAAA	-30	NA	76898144	76894151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76894200_76898100
WTC11_00069875	chr4	-	222	1	FSM	ENSG00000234036.4	ENST00000510190.1	310	1	115	-27	115	27	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATTGACTATTTAAAAC	NA	False	NA	NA	False	AATATA	-4	NA	76959054	76958832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76958800_76959100
WTC11_00069876	chr4	-	9371	13	NNC	ENSG00000138767.14	novel	1890	12	NA	NA	-660	2	at_least_one_novel_splicesite	TRUE	non_canonical	1	5	junction_1	4.5544544739799	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTTGGTTTTTGAC	-77819179	True	NA	1	True	AATAAA	-22	NA	77820275	77713384	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_77714439_77714462_77720644_77726166_77726370_77728853_77729082_77731386_77731539_77742140_77742296_77744717_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77819589
WTC11_00069880	chr4	-	493	7	FSM	ENSG00000138669.10	ENST00000456882.2	493	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.76387215526353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGAAGAAGCACATAGT	-81153920	True	NA	NA	False	AGTAAA	-32	NA	81154144	81140627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81140670_81142880_81142948_81144231_81144331_81148883_81148953_81151959_81152055_81153643_81153722_81154101
WTC11_00069881	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.6332495807108	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	-81471588	True	NA	1	True	AATATA	-22	NA	81471907	81426392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
WTC11_00069884	chr4	-	426	1	FSM	ENSG00000248448.2	ENST00000507622.2	393	1	7	-40	7	40	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCCAACTAAGACTAGC	NA	False	NA	NA	False	NA	NA	NA	81920380	81919954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81920000_81920400
WTC11_00069885	chr4	-	4570	1	FSM	ENSG00000289480.1	ENST00000685826.1	1190	1	-6	-3374	-6	3374	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATTTTTTGCACTGTC	-82349109	False	NA	-5	True	ATTAAA	-14	NA	82349447	82344877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82344900_82349400
WTC11_00069886	chr4	-	3949	7	FSM	ENSG00000152795.18	ENST00000614627.4	3968	7	0	19	0	-15	multi-exon	FALSE	canonical	3	191	junction_2	883.696167620222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTGTTGGGATGCTA	-82430206	False	NA	NA	False	ATTAAA	-4	NA	82430225	82422583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82426036_82426130_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
WTC11_00069887	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	1196.8167140016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	-82429263	True	NA	-26	True	AATAAA	-14	NA	82430408	82424629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
WTC11_00069889	chr4	-	2573	15	ISM	ENSG00000138674.17	ENST00000505984.5	3596	25	26694	-383	1	0	3prime_fragment	FALSE	canonical	3	131	junction_5	164.082933858685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82864429	False	NA	-4	True	ATTAAA	-14	NA	82864454	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361
WTC11_00069890	chr4	-	4260	25	NIC	ENSG00000138674.17	novel	4012	25	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_24	158.835207885056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82891017	False	NA	-4	True	ATTAAA	-14	NA	82891050	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82890750
WTC11_00069891	chr4	-	4266	25	NIC	ENSG00000138674.17	novel	4012	25	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_24	158.674457091661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82891020	False	NA	-4	True	ATTAAA	-14	NA	82891053	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82890750
WTC11_00069892	chr4	-	3697	25	NIC	ENSG00000138674.17	novel	3861	26	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	211.875614551714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880934	True	NA	-4	True	ATTAAA	-14	NA	82891127	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00069893	chr4	-	4159	27	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	193.736721247582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82881021	True	NA	-4	True	ATTAAA	-14	NA	82891214	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00069894	chr4	-	3952	24	NIC	ENSG00000138674.17	novel	4012	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	163.304579339559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880955	True	NA	-4	True	ATTAAA	-14	NA	82891148	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00069895	chr4	-	4082	26	NIC	ENSG00000138674.17	novel	4298	27	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	154.773403399938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880974	True	NA	-4	True	ATTAAA	-14	NA	82891167	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00069896	chr4	-	4136	26	NIC	ENSG00000138674.17	novel	4012	25	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	195.741691011394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880974	True	NA	-4	True	ATTAAA	-14	NA	82891167	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82845200_82845294_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00069897	chr4	-	4074	25	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_24	134.454705043495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82881008	True	NA	-4	True	ATTAAA	-14	NA	82891201	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
WTC11_00069898	chr4	-	4168	27	NIC	ENSG00000138674.17	novel	4298	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	213.864221704903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82881021	True	NA	-4	True	ATTAAA	-14	NA	82891214	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82830936_82830976_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00069903	chr4	-	4254	13	FSM	ENSG00000189308.11	ENST00000442461.6	4254	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	18.677638144762	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGCATTTTTTCTTTA	-83009309	False	NA	NA	False	AATAAA	-24	NA	83010731	82925714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83010483
WTC11_00069904	chr4	-	1231	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	0	45769	0	578	5prime_fragment	FALSE	canonical	3	52	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTTTCTCATTTTGA	-83454004	True	NA	41	True	AGTAAA	-24	NA	83455823	83453141	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_83453946_83455396
WTC11_00069907	chr4	-	8557	14	FSM	ENSG00000109339.24	ENST00000641462.2	8735	14	0	178	0	25	multi-exon	TRUE	canonical	0	0	junction_13	3.49978866648533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATCAAGCCCTGAGAA	-86359951	True	NA	NA	False	AATACA	-19	NA	86360053	86010582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86359657
WTC11_00069908	chr4	-	8599	14	FSM	ENSG00000109339.24	ENST00000638225.1	8941	14	154	188	-4	25	multi-exon	FALSE	canonical	0	0	junction_13	3.60637174453263	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATCAAGCCCTGAGAA	-86359966	True	NA	NA	False	AATACA	-19	NA	86360068	86010582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194308_86194408_86354529_86354645_86359657
WTC11_00069909	chr4	-	2694	14	FSM	ENSG00000109339.24	ENST00000641166.1	2684	14	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.31455497304005	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGTAGAAAGAACATAT	-86359958	True	NA	-13	True	ATTAAA	-16	NA	86360060	86016479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86089205_86089278_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194308_86194408_86354529_86354645_86359657
WTC11_00069910	chr4	-	2158	4	FSM	ENSG00000284968.1	ENST00000508280.6	2158	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.73488351136175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCATGCCTATAATGCCA	-86935973	True	NA	NA	False	NA	NA	NA	86936202	86924629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
WTC11_00069911	chr4	-	384	2	FSM	ENSG00000284968.1	ENST00000509262.1	434	2	0	50	0	-50	multi-exon	FALSE	canonical	2	4	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACTAAATCAAATTAA	-86934313	False	NA	NA	False	NA	NA	NA	86934542	86933214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86933543_86934486
WTC11_00069918	chr4	-	1224	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_4	5.06828373317832	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACATACAATTTGACTCA	-88456723	True	NA	-23	True	AATAAA	-3	NA	88456900	88415396	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419700_88420355_88420429_88456665
WTC11_00069920	chr4	-	2576	4	ISM	ENSG00000138640.15	ENST00000512339.5	1511	6	-4	80916	-4	0	5prime_fragment	FALSE	canonical	3	14	junction_1	33.95094500403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054500	True	NA	NA	False	AATAAA	-1	NA	89057154	88936282	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_88938242_89020459_89020670_89029459_89029650_89056937
WTC11_00069921	chr4	-	3044	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	195	-904	0	904	intron_retention	FALSE	canonical	3	60	junction_3	16.391054470859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTCATTAACTCCTA	-89054496	True	NA	-12	True	AATAAA	-16	NA	89057150	88988719	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
WTC11_00069922	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_5	99.8050098942934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89838199	True	NA	NA	False	AATAAA	-21	NA	89838315	89724098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
WTC11_00069924	chr4	-	5646	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-258	15892	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_1	400.699665862379	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCATGTATATCTT	-92277315	False	NA	-31	True	AATAAA	-21	NA	92277333	92252874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92257958_92263190_92263356_92269242_92269357_92277049
WTC11_00069925	chr4	-	5632	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-253	15888	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_1	411.531556775689	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCCAGTCTCATGTATA	-92277310	False	NA	-35	True	AATAAA	-17	NA	92277328	92252878	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92257958_92263190_92263351_92269242_92269357_92277049
WTC11_00069926	chr4	-	5586	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-253	15888	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	26	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCCAGTCTCATGTATA	-92277310	False	NA	-35	True	AATAAA	-17	NA	92277328	92252878	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92258021_92263190_92263356_92277049
WTC11_00069927	chr4	-	2164	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-207	7233	at_least_one_novel_splicesite	FALSE	canonical	3	208	junction_1	424	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGGATGGACACCATT	-92270218	True	NA	NA	False	AATAAA	-43	NA	92277282	92261533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92263351_92269242_92269357_92277049
WTC11_00069928	chr4	-	3592	2	Antisense	novelGene_ENSG00000152208.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTGGTCTCTTC	-92443784	True	NA	0	True	AATAAA	-22	NA	92444295	92438989	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_92442343_92444056
WTC11_00069929	chr4	-	6070	6	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_3	27.3173937263422	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTTTTCTTGGGTA	-97136828	True	NA	NA	False	AATAAA	-14	NA	97141437	97103805	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97107819_97108320_97108476_97109107_97110427_97134546_97134736_97139504_97139759_97141297
WTC11_00069930	chr4	-	7204	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	29.6348143611905	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTTTTCTTGGGTA	-97136828	True	NA	NA	False	AATAAA	-14	NA	97141437	97103805	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97110427_97134546_97134736_97139504_97139759_97141297
WTC11_00069931	chr4	-	1947	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	42.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	-97135529	False	NA	-17	True	AATAAA	-42	NA	97140138	97133324	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97134736_97139504_97139759_97139856
WTC11_00069932	chr4	-	3387	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-187	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_5	73.9964338480053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	NA	False	NA	-5	True	AATAAA	-32	NA	98658798	98470366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
WTC11_00069936	chr4	-	4772	1	FSM	ENSG00000272777.1	ENST00000609071.1	870	1	424	-4326	424	4326	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAACATTTCTACTCA	-99067689	False	NA	NA	False	NA	NA	NA	99067701	99062929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99062900_99067700
WTC11_00069937	chr4	-	4242	8	NNC	ENSG00000109270.13	novel	4163	7	NA	NA	0	181	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	138.441175896745	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTGGATGAGTCTCAC	-99890523	True	NA	NA	False	NA	NA	NA	99894427	99878154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_99879830_99879931_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
WTC11_00069938	chr4	-	4180	8	NNC	ENSG00000109270.13	novel	4163	7	NA	NA	0	181	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	138.441175896745	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTGGATGAGTCTCAC	-99890524	True	NA	NA	False	NA	NA	NA	99894428	99878154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_99879767_99879931_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
WTC11_00069940	chr4	-	3184	10	NNC	ENSG00000138821.14	novel	3152	9	NA	NA	0	58296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.5131955886548	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGATATTGTGTCCTG	-102342922	True	NA	NA	False	NA	NA	NA	102345482	102192783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_102192817_102261666_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
WTC11_00069941	chr4	-	3053	9	FSM	ENSG00000138821.14	ENST00000684289.1	3051	9	0	-2	0	0	multi-exon	FALSE	canonical	3	4	junction_7	94.932541838929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACCATGTATTGTG	-102342922	True	NA	-13	True	ATTAAA	-31	NA	102345482	102261676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315743_102344443_102344916_102345344
WTC11_00069942	chr4	-	585	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	23	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	-102431145	True	NA	2	True	ATTAAA	-21	NA	102431259	102418601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102418989_102431061
WTC11_00069944	chr4	-	201	1	FSM	ENSG00000260651.1	ENST00000563833.1	479	1	-62	340	-62	-340	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGCTCGCCTCGGCTCCC	NA	False	NA	NA	False	NA	NA	NA	102501381	102501180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102501200_102501400
WTC11_00069945	chr4	-	3521	18	FSM	ENSG00000109323.11	ENST00000644159.1	4238	18	0	717	0	1	multi-exon	FALSE	canonical	2	4	junction_1	51.6307759405323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATCTGTGGCTTATTT	-102758356	True	NA	-5	True	AATAAA	-30	NA	102760982	102631486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102632282_102633250_102633474_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
WTC11_00069947	chr4	-	4819	6	FSM	ENSG00000109332.20	ENST00000508474.5	4819	6	0	0	0	0	multi-exon	FALSE	canonical	1	1098	junction_3	832.718103562064	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCATGAGGCTGTGTT	NA	False	NA	-26	True	AATAAA	-19	NA	102812973	102796133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791
WTC11_00069949	chr4	-	336	3	FSM	ENSG00000164037.17	ENST00000511253.1	629	3	4	289	4	-289	multi-exon	FALSE	canonical	1	2	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCATCGCTTGAATCA	NA	False	NA	NA	False	NA	NA	NA	102911537	102906565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102906645_102910438_102910589_102911430
WTC11_00069950	chr4	-	6332	12	FSM	ENSG00000164038.16	ENST00000394785.9	6351	12	0	19	0	-19	multi-exon	TRUE	canonical	2	7	junction_1	5.84369406545025	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAATCCCTGCCTTCAT	-103076275	True	NA	NA	False	AATAAA	-3	NA	103076761	103022271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103026592_103028746_103028884_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103057800_103057972_103066326_103066508_103067460_103067593_103076183
WTC11_00069955	chr4	-	472	1	NIC	ENSG00000250920.3	novel	1314	4	NA	NA	1987	-5727	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAGCCTCCTTTGCA	NA	False	NA	NA	False	NA	NA	NA	103557125	103556653	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103556700_103557100
WTC11_00069957	chr4	-	1195	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	-29	-499	-12	11	multi-exon	TRUE	canonical	3	37	junction_5	215.577920947392	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCATTTTCATACTATAT	-105468516	True	NA	0	True	AATAAA	-29	NA	105474079	105369065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
WTC11_00069961	chr4	-	3501	26	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_25	18.1797249704169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGGGATGTGTGTGTGT	-106313283	True	NA	NA	False	AATAAA	-31	NA	106316226	106046079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
WTC11_00069962	chr4	-	4008	22	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	4	-9636	combination_of_known_junctions	FALSE	canonical	3	31	junction_21	18.0079347590365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTGTACAGTATTCTTA	-106313283	True	NA	3	True	AATAAA	-27	NA	106316226	106191988	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
WTC11_00069964	chr4	-	7862	34	NIC	ENSG00000188517.17	novel	8026	39	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_14	6.63241891893549	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCTTTTCTTTGA	-109302233	True	NA	NA	False	TATAAA	-23	NA	109302768	108808724	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_108813930_108817396_108817436_108819811_108819899_108824173_108824228_108825195_108825223_108827134_108827189_108832379_108832434_108838097_108838179_108841694_108841722_108844518_108844570_108845188_108845252_108846138_108846220_108848758_108848804_108852235_108852281_108859655_108859734_108860926_108860972_108863318_108863388_108869087_108869151_108889220_108889257_108889700_108889734_108896666_108896712_108899153_108899181_108901118_108901173_108918171_108918217_108920577_108920605_108937807_108937844_108940538_108940647_108942208_108942269_108974366_108974394_108974532_108974560_109048167_109048176_109050134_109050180_109300582_109300653_109301722
WTC11_00069966	chr4	-	1484	3	FSM	ENSG00000247950.8	ENST00000657290.1	1775	3	291	0	94	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCTGTGTTTTTTTT	-109432515	False	NA	NA	False	ATTAAA	-5	NA	109432683	109430094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109430781_109431691_109431747_109431940
WTC11_00069968	chr4	-	755	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	236.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTTATATCTTG	-109724141	True	NA	11	True	CATAAA	-37	NA	109729956	109714261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109714496_109717547_109717714_109729601
WTC11_00069970	chr4	-	453	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	4	-43	-4	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTCTAAATTATTTTT	-110615089	False	NA	-9	True	AATAAA	-24	NA	110615458	110595507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110595809_110615306
WTC11_00069971	chr4	-	3847	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTCAGATTAATTCT	-110611666	False	NA	NA	False	AATAAA	-38	NA	110611758	110607911	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_110607900_110611800
WTC11_00069972	chr4	-	6789	28	NIC	ENSG00000138658.16	novel	6648	28	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_18	26.8845012234868	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTGCCAAAGAAAT	-112634014	True	NA	1	True	AATAAA	-27	NA	112636888	112539332	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112603523_112603698_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
WTC11_00069973	chr4	-	6463	27	NIC	ENSG00000138658.16	novel	6648	28	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_26	21.0766774269795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTGCCAAAGAAAT	-112634018	True	NA	1	True	AATAAA	-27	NA	112636892	112539332	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
WTC11_00069975	chr4	-	388	5	NNC	ENSG00000249532.6	novel	389	3	NA	NA	0	54387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6213.56449129644	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGGTAAGAAAATGGAGA	-112646290	True	NA	NA	False	AAAAAG	-8	NA	112648699	112592088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_112592116_112639208_112639228_112646725_112646969_112647414_112647468_112648653
WTC11_00069977	chr4	-	492	3	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGGTATAATTCACA	-114493050	False	1369	-17	True	ATTAAA	-15	NA	114494419	114442919	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_114443206_114460003_114460105_114494314
WTC11_00069979	chr4	-	6733	21	FSM	ENSG00000138735.16	ENST00000394439.5	6770	21	39	-2	20	2	multi-exon	TRUE	canonical	2	2	junction_20	18.8129609578078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTGATTATTAGGGG	-119628033	False	1829	1	True	AATAAA	-24	NA	119628045	119494394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119627994
WTC11_00069985	chr4	-	2397	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-155	5912	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	46	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATTTCACTAAGAAAA	-120923006	False	NA	NA	False	AATAAA	-15	NA	120923025	120879592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_120881396_120907473_120907558_120922515
WTC11_00069987	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-121072415	True	NA	NA	False	ATTAAA	-36	NA	121072535	121035612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
WTC11_00069988	chr4	-	734	5	FSM	ENSG00000138686.10	ENST00000507814.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	28.9223097279591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCATACAGATAATGGAAA	NA	False	NA	NA	False	TTTAAA	-2	NA	121828673	121824923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121825229_121825847_121825994_121828145_121828270_121828401_121828506_121828618
WTC11_00069992	chr4	-	13619	3	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTGGTCTTCAGTCT	-125566849	True	NA	NA	False	AATAAA	-24	NA	125567099	125548970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_125562081_125564838_125565108_125566859
WTC11_00069993	chr4	-	13351	2	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	112	junction_1	0	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTGGTCTTCAGTCT	-125566850	True	NA	NA	False	AATAAA	-24	NA	125567100	125548970	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_125562081_125566859
WTC11_00069998	chr4	-	622	2	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	-134681444	True	NA	NA	False	AATAAA	-25	NA	134683236	134677969	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_134678354_134682998
WTC11_00070000	chr4	-	2680	5	FSM	ENSG00000189184.12	ENST00000510305.5	1483	5	-62	-1135	-62	0	multi-exon	FALSE	canonical	1	2	junction_4	114.762798850499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529539	True	NA	-22	True	AATAAA	-18	NA	137532556	137519702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_137521697_137528477_137528642_137528731_137528821_137529601_137529733_137532254
WTC11_00070002	chr4	-	2790	6	FSM	ENSG00000109381.21	ENST00000379549.7	2766	6	0	-24	0	0	multi-exon	FALSE	canonical	3	33	junction_3	56.2458887386447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	-139083760	True	NA	-10	True	AATATA	-21	NA	139084337	139057854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072040_139073453_139073568_139084132
WTC11_00070003	chr4	-	2748	6	NIC	ENSG00000109381.21	novel	1965	7	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	55.7831515782319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTTTTGGTCTCTGG	-139083761	True	NA	-17	True	AATATA	-14	NA	139084338	139057861	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072004_139073453_139073568_139084132
WTC11_00070004	chr4	-	3407	10	FSM	ENSG00000109381.21	ENST00000686138.1	4003	10	2	594	2	-4	multi-exon	FALSE	canonical	3	83	junction_5	30.7245829914744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGGTCTCTGGTGA	-139175097	True	NA	-14	True	AATATA	-17	NA	139177216	139057858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
WTC11_00070005	chr4	-	2336	6	Fusion	ENSG00000109381.21_ENSG00000179967.11	novel	1434	3	NA	NA	26	287	multi-exon	FALSE	canonical	1	1	junction_1	46.3352997184652	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAAAAATCCAT	-139175054	True	NA	73	True	AATAAA	-40	NA	139177173	139114642	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_139116124_139116648_139116808_139125163_139125330_139137629_139137868_139139412_139139498_139176966
WTC11_00070006	chr4	-	2292	6	Fusion	ENSG00000109381.21_ENSG00000179967.11	novel	1434	3	NA	NA	14	287	multi-exon	FALSE	canonical	1	1	junction_1	47.9274451645401	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAAAAATCCAT	-139175066	True	NA	73	True	AATAAA	-40	NA	139177185	139114642	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_139116124_139116648_139116752_139125163_139125330_139137629_139137868_139139412_139139498_139176966
WTC11_00070010	chr4	-	7759	21	NIC	ENSG00000164164.17	novel	7741	21	NA	NA	52	72	combination_of_known_junctions	FALSE	canonical	3	29	junction_13	33.7082704984993	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAAAATAAATGATTTC	-145176153	True	NA	-40	True	AATATA	-30	NA	145180537	145133576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155684_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179814
WTC11_00070016	chr4	-	499	1	FSM	ENSG00000279481.1	ENST00000623323.1	2525	1	-143	2169	-143	-2169	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCCTGACATGACTCA	-145833112	False	NA	NA	False	NA	NA	NA	145833123	145832624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145832600_145833100
WTC11_00070019	chr4	-	2779	12	NNC	ENSG00000164169.13	novel	3461	12	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	33.0151480384384	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAATAAAAGGGTAGCAT	-147682287	True	NA	-11	True	AATAAA	-17	NA	147684119	147638387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670709_147672958_147673127_147673637_147673875_147680322_147680472_147683798
WTC11_00070020	chr4	-	10187	58	NNC	ENSG00000198589.14	novel	10353	58	NA	NA	-33795	-6	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_56	47.186773217035	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAACTCTGATTCAGTCC	-151048240	True	NA	-11	True	AATAAA	-26	NA	151049522	150264440	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151049349_151049387_151049431
WTC11_00070022	chr4	-	5224	21	NIC	ENSG00000109686.19	novel	4888	20	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	60.5546034583664	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTCTCATACTAGAC	-151319619	True	NA	-5	True	AATAAA	-19	NA	151325547	151120283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151144219_151144289_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176524_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
WTC11_00070026	chr4	-	776	3	FSM	ENSG00000109670.16	ENST00000604095.1	755	3	0	-21	0	21	multi-exon	FALSE	canonical	2	6	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACACATCGCAATTTTTG	-152535194	False	NA	16	True	ATTAAA	-38	NA	152535210	152530251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152530851_152534940_152535034_152535126
WTC11_00070028	chr4	-	1383	8	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-167	0	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_1	15.7012933303247	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-153759975	True	NA	NA	False	AATAAA	-34	NA	153760191	153710159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153728206_153728362_153751437_153751476_153759796
WTC11_00070029	chr4	-	1196	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-138	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	14.3459247020035	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGCTGTTTCTTAACTC	-153760140	False	NA	NA	False	AATAAA	-31	NA	153760162	153710162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
WTC11_00070032	chr4	-	986	7	FSM	ENSG00000256043.5	ENST00000680553.1	5178	7	0	4192	0	-3781	multi-exon	FALSE	canonical	2	3	junction_2	4.92160768674447	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCATGAGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	155953902	155928335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943265_155953712
WTC11_00070036	chr4	-	2843	3	NIC	ENSG00000164128.7	novel	2762	3	NA	NA	327	-5	intron_retention	FALSE	canonical	3	27	junction_2	33.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGGAGTCTCTTTCAGT	-163344477	False	NA	-7	True	ATTAAA	-22	NA	163344505	163323966	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_163325759_163325855_163326706_163344304
WTC11_00070047	chr4	-	759	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	0	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	25.7184758490856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	-170089103	True	NA	-2	True	AATAAA	-30	NA	170090221	170075270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
WTC11_00070053	chr4	-	1836	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	-7	0	7	multi-exon	FALSE	canonical	3	10	junction_3	187.58797935902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCCTGTCCTTTCTGT	-182915242	True	NA	-6	True	NA	NA	NA	182917369	182890052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
WTC11_00070063	chr4	-	2009	20	FSM	ENSG00000154556.18	ENST00000319454.10	2011	20	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_9	21.389152504841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATTCTTCTTATCTT	-185774195	False	NA	NA	False	NA	NA	NA	185775288	185593885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185593936_185611779_185611981_185614830_185614960_185615044_185615160_185618584_185618632_185620062_185620152_185626831_185627020_185630548_185630599_185635354_185635412_185638876_185639036_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678479_185678795_185678823_185690561_185690612_185775226
WTC11_00070064	chr4	-	7800	13	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	20	-1067	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	17.0707270560519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCTTTTGTTGGAATA	-185812063	True	NA	-2	True	AATAAA	-21	NA	185812189	185639961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226_185775367_185811663
WTC11_00070070	chr4	-	2201	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	74	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186236950	True	NA	-1	True	ATTAAA	-22	NA	186247310	186241993	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186245315_186246941_186247070
WTC11_00070071	chr4	-	487	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	69	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186236950	True	NA	-1	True	ATTAAA	-22	NA	186247310	186241993	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186245315_186245441_186247284
WTC11_00070072	chr4	-	540	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_2	33.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186236962	True	NA	-1	True	ATTAAA	-22	NA	186247322	186241993	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242333_186245315_186245479_186247284
WTC11_00070078	chr4	+	2934	1	Antisense	novelGene_ENSG00000249592.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGGTCACCTCTGTGA	776709	False	NA	NA	False	NA	NA	NA	776728	779662	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_776700_779700
WTC11_00070079	chr4	+	3061	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACGTCTCTTCACTGT	NA	False	NA	NA	False	NA	NA	NA	4042219	4045280	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4042200_4045300
WTC11_00070080	chr4	+	582	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATAGGGGTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	4664343	4664925	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4664300_4664900
WTC11_00070082	chr4	+	1848	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTATTTGGTGGTCTCTTC	24326307	False	NA	NA	False	AATAAA	-22	NA	24326326	24328174	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24326300_24328200
WTC11_00070083	chr4	+	4713	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTGCAATTGGCCA	NA	False	NA	NA	False	NA	NA	NA	44398836	44403549	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44398800_44403500
WTC11_00070084	chr4	+	2034	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGTACTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	44403809	44405843	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44403800_44405800
WTC11_00070085	chr4	+	1165	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTACTGAAATGATTGCT	53461592	False	NA	86	True	NA	NA	NA	53461607	53462772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_53461600_53462800
WTC11_00070086	chr4	+	216	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGGAAAACAAAACACAACA	56596026	False	NA	65	True	AATAAA	-11	NA	56596043	56596259	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_56596000_56596300
WTC11_00070087	chr4	+	914	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGGTTAAGATGGGGAG	NA	False	NA	NA	False	NA	NA	NA	78715782	78716696	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_78715800_78716700
WTC11_00070089	chr4	+	357	1	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAGGGGCCTGAAG	NA	False	NA	NA	False	NA	NA	NA	79555173	79555530	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79555200_79555500
WTC11_00070090	chr4	+	274	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCTAAAACAGTAAGGTC	NA	False	NA	NA	False	ATTAAA	-34	NA	79555806	79556080	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79555800_79556100
WTC11_00070091	chr4	+	5625	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAGAACCCGTTCTGT	92310350	False	NA	NA	False	AAAAAG	-23	NA	92310389	92316014	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92310400_92316000
WTC11_00070092	chr4	+	418	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTAAGAGGCGGGCTA	NA	False	NA	NA	False	NA	NA	NA	94085871	94086289	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94085900_94086300
WTC11_00070093	chr4	+	255	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTGACTTACCTTCCA	94087495	False	NA	NA	False	NA	NA	NA	94087548	94087803	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94087500_94087800
WTC11_00070094	chr4	+	335	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAAATAAGCAATTGGG	94088877	False	NA	NA	False	GGGGCT	-20	NA	94088930	94089265	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94088900_94089300
WTC11_00070097	chr4	+	222	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAGAAACAAAGTAACTCT	NA	False	NA	NA	False	NA	NA	NA	118555289	118555511	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118555300_118555500
WTC11_00070098	chr4	+	714	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATATCTTGGAGTATT	NA	False	NA	NA	False	NA	NA	NA	132077418	132078132	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_132077400_132078100
WTC11_00070111	chr4	+	4845	3	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-24	494	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTGTGTTAAGTAAC	120897	True	NA	2	True	AATAAA	-14	NA	124476	164656	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_125297_126847_127126_160909
WTC11_00070112	chr4	+	3587	1	FSM	ENSG00000275426.1	ENST00000618815.1	580	1	-2723	-284	-2723	284	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTATTTTGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	147014	150601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147000_150600
WTC11_00070116	chr4	+	887	6	NIC	ENSG00000133256.13	novel	2120	20	NA	NA	11	-123	intron_retention	FALSE	canonical	0	0	junction_4	22.2494943762774	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCACCCAAGTCTTCAA	663005	True	NA	NA	False	NA	NA	NA	663733	670070	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
WTC11_00070121	chr4	+	4020	1	FSM	ENSG00000196810.5	ENST00000357591.2	911	1	-1610	-1499	-384	1499	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATACCATTGCGTATATA	1248839	True	NA	-69	True	NA	NA	NA	1248915	1252935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1248900_1252900
WTC11_00070125	chr4	+	468	2	Antisense	novelGene_ENSG00000168936.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAATGTGCTGCTGTGCC	NA	False	NA	NA	False	AAAAAG	-6	NA	1706863	1791898	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_1707298_1791864
WTC11_00070127	chr4	+	3172	9	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	-95	-298	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	96.3093972569655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATTCTATTTTTATCCA	1871266	False	NA	13	True	AATAAA	-15	NA	1871297	1943437	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1939653_1939779_1942338
WTC11_00070128	chr4	+	8465	10	FSM	ENSG00000109685.19	ENST00000398261.6	8465	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	88.8869444231766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTGTTCCTTCCTCTGA	NA	False	NA	-7	True	AATAAA	-2	NA	1892169	1948799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1892264_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1942338
WTC11_00070131	chr4	+	5365	20	NIC	ENSG00000125386.16	novel	5522	21	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	23.2296734486703	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGGCTGCTTCTTTCT	2536432	False	NA	21	True	AATACA	-15	NA	2536604	2732573	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2537171_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2731774
WTC11_00070132	chr4	+	5508	22	NIC	ENSG00000125386.16	novel	5522	21	NA	NA	99	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	25.4737426505382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGAGACCTCGGCTGC	2535240	False	NA	13	True	ATTAAA	-39	NA	2536745	2732565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2537171_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2689505_2689705_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2719979_2720073_2731774
WTC11_00070133	chr4	+	589	4	FSM	ENSG00000087266.17	ENST00000510074.5	649	4	60	0	60	0	multi-exon	FALSE	canonical	1	1	junction_1	48.6415460280612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGTGCCAGCGCCCA	2793466	False	NA	NA	False	NA	NA	NA	2794218	2824914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2794263_2820613_2820754_2822934_2823038_2824612
WTC11_00070135	chr4	+	9064	13	FSM	ENSG00000087266.17	ENST00000356331.9	9211	13	147	0	147	0	multi-exon	FALSE	canonical	1	1	junction_1	32.0988057929471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTCACTTGTGTTTG	2818939	False	NA	14	True	ATTAAA	-25	NA	2818960	2841098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2819071_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
WTC11_00070136	chr4	+	3988	16	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-5	0	intron_retention	FALSE	canonical	2	30	junction_1	300.512865318978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835554	True	NA	13	True	AATAAA	-14	NA	2843967	2930062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2844025_2867971_2868130_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
WTC11_00070138	chr4	+	7187	41	FSM	ENSG00000197386.14	ENST00000680291.1	7184	41	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_13	15.8724407385884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGGAGGAAAAGGTTGC	3069248	True	NA	NA	False	NA	NA	NA	3074677	3201450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888_3122937_3125548_3125630_3127263_3127605_3129923_3130000_3130304_3130424_3131285_3131398_3131637_3131776_3132561_3132721_3132813_3132912_3134400_3134541_3135903_3135968_3136225_3136327_3140509_3140657_3142765_3142887_3145151_3145229_3146796_3146949_3148004_3148208_3154292_3154420_3157071_3157200_3160281_3160393_3172319_3172398_3172907_3173132_3174720_3174800_3174945_3175108_3177331_3177388_3178297_3178447_3180514_3180652_3182353_3182471_3186596_3186720_3187650_3187887_3188950_3189094_3199731
WTC11_00070140	chr4	+	4880	4	NNC	ENSG00000251271.3	novel	768	8	NA	NA	-7696	-5291	intron_retention	FALSE	canonical	2	3	junction_2	21.9544984001001	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTCTACCA	3926760	True	NA	NA	False	NA	NA	NA	3927750	3937228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_3927996_3929642_3933238_3935448_3935560_3936299
WTC11_00070142	chr4	+	1757	5	Fusion	ENSG00000280310.1_ENSG00000247708.8	novel	3655	5	NA	NA	0	6	multi-exon	FALSE	canonical	0	0	junction_1	7.08431365765238	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCATAAATTACCCAGAC	4539569	True	NA	NA	False	ATTAAA	-8	NA	4542198	4821458	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_+_4542427_4544737_4544908_4648976_4649110_4649369_4649543_4820405
WTC11_00070143	chr4	+	3484	12	FSM	ENSG00000152953.13	ENST00000282908.10	3535	12	51	0	51	0	multi-exon	FALSE	canonical	1	2	junction_1	2.23421922317173	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTTCTCACCACTTTG	5051393	True	NA	19	True	AATAAA	-13	NA	5051530	5500989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5051916_5139904_5139961_5168298_5168451_5331219_5331394_5398206_5398245_5416844_5416935_5446672_5446777_5456806_5456924_5460102_5460229_5466702_5466835_5468005_5468071_5498944
WTC11_00070144	chr4	+	6226	22	NNC	ENSG00000072840.13	novel	6427	21	NA	NA	-22	-303	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	17.7323256836113	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACTGCATTTTAGCCA	5710029	True	NA	NA	False	ATTAAA	-20	NA	5711178	5814002	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_5711555_5719247_5719374_5729306_5729391_5731424_5731658_5733350_5733436_5741715_5741815_5745203_5745342_5748147_5748307_5752835_5753053_5753784_5753934_5756263_5756363_5783551_5783765_5793607_5793718_5797021_5797233_5798585_5798793_5801749_5801833_5801949_5802095_5804729_5804842_5808200_5808328_5809517_5809612_5810338_5810451_5810955
WTC11_00070149	chr4	+	5617	26	NNC	ENSG00000184985.16	novel	762	3	NA	NA	133450	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.40436147472026	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTTATTGTGAAGAT	NA	False	NA	8	True	ATTAAA	-15	NA	7529727	7742827	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_7529808_7531529_7531630_7638327_7638493_7654133_7654208_7661499_7661565_7664352_7664472_7667123_7667214_7676049_7676230_7682742_7682890_7689485_7689589_7697197_7697275_7703279_7703372_7704176_7704285_7712732_7712854_7714239_7714374_7715182_7715312_7718011_7718184_7723696_7723884_7725153_7725288_7726779_7726904_7728349_7728463_7729586_7729713_7733321_7733422_7734271_7734375_7737068_7737215_7740199
WTC11_00070150	chr4	+	775	3	FSM	ENSG00000155275.19	ENST00000528167.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATCCCAAACCCACGTG	8439392	True	NA	NA	False	NA	NA	NA	8440804	8449720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8441442_8446475_8446591_8449697
WTC11_00070151	chr4	+	925	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	22	28613	22	-9	5prime_fragment	FALSE	canonical	3	31	junction_2	5.8309518948453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAAATAATGTGGCTT	15478542	True	NA	0	True	ATTAAA	-28	NA	15479237	15511663	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
WTC11_00070153	chr4	+	2876	3	FSM	ENSG00000237765.8	ENST00000504137.1	2877	3	0	1	0	-1	multi-exon	FALSE	canonical	3	53	junction_1	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTGTGAATAGCTCAT	15681703	False	NA	3	True	AATAAA	-14	NA	15681717	15690446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681785_15686235_15687149_15688550
WTC11_00070154	chr4	+	1140	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	-4	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	99.6527303522922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	15678937	True	NA	NA	False	AATAAA	-16	NA	15681751	15689096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
WTC11_00070157	chr4	+	468	1	NIC	ENSG00000263327.6	novel	1031	3	NA	NA	29195	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCTCTAGCCTGGAG	NA	False	NA	NA	False	NA	NA	NA	16256239	16256707	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_16256200_16256700
WTC11_00070158	chr4	+	370	3	FSM	ENSG00000002549.13	ENST00000508497.5	651	3	0	281	0	-281	multi-exon	FALSE	canonical	3	461	junction_1	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGGGCTGTCTAGTCA	17571213	True	NA	NA	False	NA	NA	NA	17577425	17581871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17577568_17579823_17579940_17581759
WTC11_00070160	chr4	+	1923	9	ISM	ENSG00000145147.20	ENST00000503823.5	5233	36	-278	127046	-278	5859	5prime_fragment	FALSE	canonical	2	13	junction_8	6.32331993497087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGATGTTTTTTCT	20252943	False	NA	NA	False	TTTAAA	-17	NA	20252981	20492074	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_20253995_20256671_20256744_20257867_20257940_20268809_20268882_20467751_20467824_20480715_20480788_20486199_20486272_20488818_20488983_20491760
WTC11_00070161	chr4	+	1392	9	FSM	ENSG00000163138.19	ENST00000467997.6	1373	9	-19	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	5.58457697592217	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTGATTAACTGA	20699800	True	NA	-1	True	AATAAA	-7	NA	20700457	20752888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
WTC11_00070162	chr4	+	1782	3	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	18	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCGGTGCACTTGAAGC	24501242	False	NA	14	True	AATAAA	-20	NA	24501351	24508374	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24501574_24503271_24503560_24507102
WTC11_00070166	chr4	+	291	1	FSM	ENSG00000242640.1	ENST00000496507.1	171	1	-22	-98	-22	98	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAACAAAAAAAAATGTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	25678827	25679118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25678800_25679100
WTC11_00070167	chr4	+	641	3	FSM	ENSG00000250317.9	ENST00000515764.2	773	3	132	0	132	0	multi-exon	FALSE	canonical	0	0	junction_1	293.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAAGGTCCGGGTCTCTT	NA	False	NA	NA	False	AATACA	-16	NA	25861961	25929545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25862154_25928312_25928370_25929153
WTC11_00070168	chr4	+	3341	13	NNC	ENSG00000109689.19	novel	4965	15	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.6175930427052	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTGCTGATTTTTG	26857077	True	NA	18	True	AATAAA	-18	NA	26857616	27023966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_26857749_26858198_26858348_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27008427_27008529_27008763_27009003_27017710_27017985_27022518
WTC11_00070169	chr4	+	266	1	FSM	ENSG00000239983.1	ENST00000482574.1	353	1	11	76	11	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATATACTTTGGTTACCT	NA	False	NA	NA	False	NA	NA	NA	33968184	33968450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_33968200_33968400
WTC11_00070170	chr4	+	2496	15	NIC	ENSG00000169299.14	novel	3211	14	NA	NA	0	64	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	73.6342311700204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATAGATCAAATGTTGT	37823493	True	NA	NA	False	AGTAAA	-5	NA	37826707	37862077	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839516_37839684_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
WTC11_00070171	chr4	+	4310	21	NIC	ENSG00000065882.17	novel	5703	20	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	2	22	junction_2	107.932339917191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTCACTGTGTTTG	37890409	True	NA	30	True	AATAAA	-30	NA	37891098	38137633	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
WTC11_00070172	chr4	+	5183	7	NNC	ENSG00000109787.13	novel	5594	6	NA	NA	-302	-475	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	36.9128101823142	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCATGTGATTACTTC	38663881	False	NA	NA	False	AATAAA	-18	NA	38663894	38701042	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_38663944_38664183_38664462_38680586_38680683_38688584_38689072_38689728_38689880_38694745_38694907_38697081
WTC11_00070173	chr4	+	7806	12	NNC	ENSG00000109790.18	novel	3425	12	NA	NA	-388	-28	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_1	46.6881689935142	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGATATTTAATTT	39044471	False	NA	NA	False	AAAACA	-8	NA	39044650	39126205	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_39045097_39062561_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
WTC11_00070174	chr4	+	2236	10	FSM	ENSG00000109790.18	ENST00000381930.8	3288	10	119	933	119	-933	multi-exon	FALSE	canonical	3	16	junction_1	37.4505435191072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCAATCTTGTCCAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	39062558	39115399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158
WTC11_00070180	chr4	+	747	3	FSM	ENSG00000078177.14	ENST00000515550.1	724	3	-23	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	42	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCGCAGGTTGTAGCA	40051212	True	NA	NA	False	TTTAAA	-13	NA	40056912	40102606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40057031_40073454_40073552_40102074
WTC11_00070181	chr4	+	5962	18	NNC	ENSG00000078177.14	novel	9720	18	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	36.5852088780496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGTGAGGAAATCCTT	40051217	True	NA	7	True	AATAAA	-16	NA	40056917	40158253	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40057031_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191_40154268_40157861
WTC11_00070182	chr4	+	1205	4	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	0	10521	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_3	64.5032298932904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCCTGAAGTTAGTGA	NA	False	NA	NA	False	AGTAAA	-24	NA	40774264	40786997	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40774418_40774766_40774951_40776048_40776260_40786340
WTC11_00070185	chr4	+	915	1	FSM	ENSG00000249212.1	ENST00000509767.1	915	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGCACAAATCTTTCC	42029196	False	NA	NA	False	NA	NA	NA	42029208	42030123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_42029200_42030100
WTC11_00070186	chr4	+	2099	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTAAGATTATTTGC	NA	False	NA	43	True	NA	NA	NA	42097304	42099403	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_42097300_42099400
WTC11_00070187	chr4	+	3854	1	FSM	ENSG00000260918.1	ENST00000562284.1	7000	1	3427	-281	3427	281	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTATGTCAATAAGAAG	NA	False	NA	NA	False	TTTAAA	-39	NA	47435386	47439240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_47435400_47439200
WTC11_00070188	chr4	+	226	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAGGCTTAATAAATTC	NA	False	NA	NA	False	TATAAA	-15	NA	47707016	47707242	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_47707000_47707200
WTC11_00070190	chr4	+	4219	7	FSM	ENSG00000109171.15	ENST00000512093.5	4219	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	73.0426055273374	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTCTTTAAGTGTTT	48377888	False	NA	15	True	AATAAA	-29	NA	48377900	48425015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48378061_48379689_48379849_48382567_48382928_48383646_48383785_48394575_48394654_48420124_48420444_48422010
WTC11_00070192	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	307.305222864825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	48830790	True	NA	17	True	AATAAA	-21	NA	48831341	48861250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
WTC11_00070194	chr4	+	4840	12	FSM	ENSG00000109184.15	ENST00000477560.5	4840	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	118.990797616267	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840218	True	NA	11	True	AATAAA	-25	NA	51843196	51916837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51887245_51891759_51891852_51899269_51899379_51908919_51908976_51911069_51911175_51913289_51913393_51913528
WTC11_00070198	chr4	+	1935	2	FSM	ENSG00000250302.3	ENST00000653034.1	1948	2	13	0	13	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACCCCAAGCTACTT	NA	False	NA	NA	False	ATTAAA	-10	NA	52750895	52753440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52751424_52752033
WTC11_00070199	chr4	+	1962	18	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	116.770499189516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370177	False	NA	29	True	AATAAA	-30	NA	53377791	53459621	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00070200	chr4	+	1943	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	119.03149202522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370177	False	NA	76	True	AATAAA	-19	NA	53377791	53459668	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
WTC11_00070202	chr4	+	5223	21	FSM	ENSG00000157404.17	ENST00000692783.1	5230	21	-45	52	-11	0	multi-exon	FALSE	canonical	3	36	junction_9	30.6757233003559	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54657853	False	NA	19	True	AATAAA	-20	NA	54657877	54740715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731330_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
WTC11_00070206	chr4	+	2115	2	NNC	ENSG00000128050.9	novel	3340	10	NA	NA	7411	0	at_least_one_novel_splicesite	FALSE	canonical	3	348	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	56455867	False	NA	29	True	ATTAAA	-18	NA	56456109	56461361	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_56456235_56459371
WTC11_00070209	chr4	+	1545	2	NNC	ENSG00000150471.17	novel	527	3	NA	NA	-20	-183563	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGGACGGACAGGG	61199899	True	NA	NA	False	NA	NA	NA	61200305	61202206	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_61201766_61202121
WTC11_00070210	chr4	+	1515	6	NNC	ENSG00000150471.17	novel	4838	23	NA	NA	-124197	56187	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.05407683541936	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAATATTTACTGT	61372903	False	NA	-66	True	NA	NA	NA	61372923	61733579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_61372995_61383123_61383190_61497120_61497349_61587226_61587441_61676825_61676936_61732753
WTC11_00070212	chr4	+	234	1	FSM	ENSG00000250030.2	ENST00000508720.2	308	1	-212	286	-212	-286	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCCAAAGAATTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	67446054	67446288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67446100_67446300
WTC11_00070213	chr4	+	233	1	FSM	ENSG00000270257.1	ENST00000604441.1	183	1	-22	-28	-22	28	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGCCTCTGTGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	67638154	67638387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67638200_67638400
WTC11_00070214	chr4	+	4451	18	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	85	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	27.7139366337051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGATTGATGATTGT	NA	False	NA	9	True	AATAAA	-20	NA	70704508	70808619	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793764_70793905_70794794_70794895_70800140_70800206_70802955_70802984_70804347_70804417_70806515
WTC11_00070215	chr4	+	593	4	FSM	ENSG00000173542.9	ENST00000509041.5	2056	4	-26	1489	-5	0	multi-exon	FALSE	canonical	3	55	junction_1	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATGAGACGTTATTTC	70899108	True	NA	NA	False	NA	NA	NA	70902320	70975254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152
WTC11_00070216	chr4	+	377	1	FSM	ENSG00000248641.1	ENST00000430198.2	324	1	-53	0	-53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTGTGCTGCCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	73098768	73099145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_73098800_73099100
WTC11_00070218	chr4	+	384	3	FSM	ENSG00000174796.12	ENST00000504384.5	1132	3	7	741	1	48	multi-exon	FALSE	canonical	3	51	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTTATGAGATACTGT	75513426	True	NA	NA	False	NA	NA	NA	75514444	75516979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771
WTC11_00070219	chr4	+	3423	4	FSM	ENSG00000174796.12	ENST00000380837.7	3423	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	26.4112770527204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75526959
WTC11_00070220	chr4	+	1544	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	-12	1	9	-1	multi-exon	FALSE	canonical	1	1	junction_4	4.74234076362795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTCTATTGCCTTTTT	76251574	True	NA	NA	False	AATAAA	-22	NA	76251708	76283782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
WTC11_00070221	chr4	+	392	3	FSM	ENSG00000138771.16	ENST00000497440.5	611	3	0	219	0	72	multi-exon	FALSE	canonical	0	0	junction_2	8.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGAAGTGGTGGTCT	76436014	False	NA	NA	False	NA	NA	NA	76436111	76645426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_76436221_76555608_76555764_76645298
WTC11_00070222	chr4	+	3702	7	ISM	ENSG00000138764.15	ENST00000502280.5	1459	9	38	-827	23	827	intron_retention	FALSE	canonical	3	99	junction_1	13.1624465810882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTATTTTTTTACCTTG	77155837	True	NA	NA	False	TATAAA	-41	NA	77157247	77167011	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273
WTC11_00070226	chr4	+	789	1	FSM	ENSG00000272677.2	ENST00000687638.1	776	1	-23	10	-23	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTATGAGTTTGTGTTC	82372898	False	NA	10	True	TATAAA	-21	NA	82374118	82374907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82374100_82374900
WTC11_00070228	chr4	+	4756	5	NIC	ENSG00000168152.13	novel	3825	5	NA	NA	-2338	316	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	45.2348040782758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTGTGCATTATTCT	82902570	False	NA	5	True	AATACA	-13	NA	82904087	82920285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_82904932_82906323_82906628_82907784_82907936_82910696_82910812_82916943
WTC11_00070229	chr4	+	880	7	FSM	ENSG00000138663.9	ENST00000509317.5	878	7	-2	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	196.021895035563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCAAACAGCACCAGAA	83029809	True	NA	NA	False	NA	NA	NA	83035170	83075371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
WTC11_00070231	chr4	+	8070	47	NNC	ENSG00000163629.13	novel	8487	47	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_9	46.0098411434074	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCCAAAACTGTGTGC	86594709	False	NA	11	True	AATAAA	-19	NA	86594720	86815149	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722214_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
WTC11_00070234	chr4	+	2594	2	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACAGACATTCTTTCTC	87921884	True	NA	NA	False	AATAAA	-43	NA	87922237	87943498	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87941067
WTC11_00070235	chr4	+	4727	13	NIC	ENSG00000118762.8	novel	5089	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	67.9094065649229	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	88005058	True	NA	8	True	AATAAA	-18	NA	88007646	88077777	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88051990_88052159_88056085_88056268_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
WTC11_00070237	chr4	+	3781	22	FSM	ENSG00000138642.16	ENST00000380265.9	3781	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	9.78568532031398	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	NA	False	NA	30	True	AATAAA	-20	NA	88378738	88443097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
WTC11_00070238	chr4	+	517	4	FSM	ENSG00000138642.16	ENST00000504905.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.613540144522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGAGGTCCCTGGAG	88378324	True	NA	NA	False	NA	NA	NA	88378910	88390732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88379121_88383231_88383381_88385498_88385576_88390651
WTC11_00070240	chr4	+	3276	21	NIC	ENSG00000138646.9	novel	3511	23	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_13	29.1382909588054	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTCTTATTCACTA	88455344	True	NA	5	True	AATAAA	-17	NA	88457128	88506163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494_88504598_88505672
WTC11_00070242	chr4	+	4626	4	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	12.9614813968157	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678165	True	NA	8	True	AATAAA	-18	NA	89681453	89694130	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_89681685_89684444_89687003_89691284_89691406_89692414
WTC11_00070243	chr4	+	515	2	FSM	ENSG00000251095.8	ENST00000689416.1	527	2	12	0	-6	0	multi-exon	FALSE	canonical	2	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	89678228	True	NA	7	True	AATAAA	-18	NA	89681516	89720172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89681685_89719825
WTC11_00070245	chr4	+	269	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACACATTAATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	90574299	90574568	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_90574300_90574600
WTC11_00070246	chr4	+	3668	2	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGAGACAGCTATCAT	NA	False	NA	NA	False	CATAAA	-7	NA	91623810	91629721	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91626480
WTC11_00070247	chr4	+	667	2	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	91626374	False	NA	NA	False	AATAAA	-18	NA	91626384	91629659	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91626630_91629237
WTC11_00070248	chr4	+	4094	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	134333	-521344	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTATTATGAAGGTTTT	NA	False	NA	NA	False	AATATA	-12	NA	92438989	92590903	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_92442311_92590130
WTC11_00070249	chr4	+	2214	1	FSM	ENSG00000172238.6	ENST00000306011.6	2212	1	-47	45	-47	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTATTTTGTTTTGC	93828671	True	NA	NA	False	NA	NA	NA	93828705	93830919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_93828700_93830900
WTC11_00070250	chr4	+	240	2	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAAGGAGTTGTTGT	94295195	False	NA	NA	False	NA	NA	NA	94295205	94385669	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94295367_94385590
WTC11_00070251	chr4	+	5640	1	FSM	ENSG00000260641.1	ENST00000569927.1	5647	1	-14	21	-14	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATGTCTTTCACACA	98658850	True	NA	NA	False	AATAAA	-2	NA	98658889	98664529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98658900_98664500
WTC11_00070252	chr4	+	746	4	FSM	ENSG00000248740.7	ENST00000668077.1	774	4	28	0	24	0	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTCTCTAATATGTG	103255579	True	NA	NA	False	AATAAA	-38	NA	103255849	103371857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_103255947_103256177_103256295_103343091_103343236_103371469
WTC11_00070253	chr4	+	857	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	24	0	24	0	multi-exon	FALSE	canonical	1	3	junction_2	4.08248290463863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	103255579	True	NA	7	True	AATAAA	-16	NA	103255849	103453755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
WTC11_00070255	chr4	+	1230	1	FSM	ENSG00000249264.1	ENST00000514975.1	1383	1	151	2	151	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTATCCCTACTACCT	NA	False	NA	NA	False	NA	NA	NA	105484848	105486078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_105484800_105486100
WTC11_00070256	chr4	+	4236	12	NNC	ENSG00000138780.15	novel	4304	12	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	31.2671770973391	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	105705639	True	NA	9	True	AATAAA	-21	NA	105708846	105847725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823065_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
WTC11_00070257	chr4	+	407	3	FSM	ENSG00000168743.13	ENST00000514632.1	536	3	129	0	-31	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATGTGAGCTTGAAAAA	NA	False	NA	NA	False	AAAAAG	-29	NA	105959027	105968945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_105959127_105967187_105967445_105968894
WTC11_00070258	chr4	+	2019	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	-18	0	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	106308536	True	NA	NA	False	AAGAAA	-10	NA	106316504	106318523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106316500_106318500
WTC11_00070260	chr4	+	5225	25	FSM	ENSG00000138802.11	ENST00000504968.6	4066	25	52	-1211	9	61	multi-exon	FALSE	canonical	3	5	junction_1	39.5447838602711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTATTCTAAAACAAATG	109431245	True	NA	NA	False	AATACA	-40	NA	109433823	109540957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109434003_109449416_109449510_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
WTC11_00070261	chr4	+	1091	7	NIC	ENSG00000005059.16	novel	2230	8	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	100.390349248432	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTTGAAGTTCTCAA	109558058	True	NA	23	True	ATTAAA	-17	NA	109560276	109687716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109560437_109659010_109659087_109660194_109660366_109682581_109682743_109684442_109684647_109685250_109685368_109687514
WTC11_00070262	chr4	+	2306	9	NNC	ENSG00000005059.16	novel	2230	8	NA	NA	104	44	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	109.57274980578	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATTAAAAAATAATACAA	109558131	True	NA	NA	False	AATACA	-36	NA	109560349	109688763	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_109560437_109659010_109659087_109660194_109660366_109663739_109663876_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
WTC11_00070263	chr4	+	311	3	FSM	ENSG00000138792.10	ENST00000502711.1	579	3	141	127	141	-127	multi-exon	FALSE	canonical	1	3	junction_2	0.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCTATGGGAAGAACAT	NA	False	NA	NA	False	ATTAAA	-40	NA	110549568	110553390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_110549633_110549715_110549887_110553314
WTC11_00070265	chr4	+	2088	13	NIC	ENSG00000174720.17	novel	2107	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_7	106.67744086211	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635487	False	NA	17	True	AATAAA	-17	NA	112637200	112657586	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647650_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
WTC11_00070266	chr4	+	788	1	FSM	ENSG00000234841.4	ENST00000504528.2	1301	1	624	-111	624	111	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGCAAACAAATGGAAAAAC	112826758	False	NA	NA	False	NA	NA	NA	112826930	112827718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112826900_112827700
WTC11_00070267	chr4	+	488	3	FSM	ENSG00000145362.21	ENST00000511380.1	573	3	85	0	85	0	multi-exon	FALSE	canonical	2	4	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATTTATGTTGGTAGA	113145538	True	NA	NA	False	NA	NA	NA	113145716	113196466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_113146004_113174415_113174518_113196367
WTC11_00070268	chr4	+	1680	13	ISM	ENSG00000145362.21	ENST00000634436.1	3584	31	66069	48074	-13	-14542	internal_fragment	FALSE	canonical	3	24	junction_9	3.69966214673719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTAGTTCTAAAG	NA	False	NA	NA	False	NA	NA	NA	113240484	113288582	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_113240584_113242110_113242210_113249763_113249863_113255734_113255933_113258049_113258149_113258312_113258412_113264896_113264996_113274451_113274650_113277836_113277936_113278459_113278559_113282674_113282873_113287604_113287704_113288387
WTC11_00070269	chr4	+	4204	6	NNC	ENSG00000174607.11	novel	3733	6	NA	NA	0	351	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	83.0508278104439	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGAAAGTATTTATTCA	114598131	True	NA	-5	True	AATAAA	-4	NA	114598769	114678576	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_114599058_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
WTC11_00070270	chr4	+	1018	1	FSM	ENSG00000213493.3	ENST00000514175.1	1451	1	1199	-766	1199	766	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCAGAGAATTACTAAAT	NA	False	NA	NA	False	TATAAA	-3	NA	116599359	116600377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_116599400_116600400
WTC11_00070271	chr4	+	485	4	FSM	ENSG00000269893.9	ENST00000602414.6	485	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	328.756242019321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267149	True	NA	20	True	AATAAA	-21	NA	118278754	118279823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278793_118278933_118279138_118279388_118279432_118279623
WTC11_00070272	chr4	+	789	5	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	3	65617	3	-65617	5prime_fragment	FALSE	canonical	3	48	junction_4	15.188400179084	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAAAGCTGCTGACTG	NA	False	NA	NA	False	NA	NA	NA	118467592	118488483	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118467669_118478666_118478726_118478821_118478985_118480304_118480440_118488127
WTC11_00070273	chr4	+	566	1	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	47160	38785	47160	-38785	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGACTCCAAGGTTAAA	NA	False	NA	NA	False	GATAAA	-38	NA	118514749	118515315	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118514700_118515300
WTC11_00070274	chr4	+	310	2	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	55718	16068	55718	-16068	internal_fragment	FALSE	canonical	3	123	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGGTTCTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	118523307	118538032	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118523446_118537860
WTC11_00070275	chr4	+	353	4	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	72670	1822	72670	-1822	internal_fragment	FALSE	canonical	0	0	junction_3	50.6644736367495	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCTACAAGGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	118540259	118552278	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118540390_118544315_118544405_118551078_118551173_118552238
WTC11_00070276	chr4	+	6124	13	NNC	ENSG00000260404.4	novel	4395	10	NA	NA	25	1269	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	11.7718473014599	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGGAGTGAGTTTCTG	118590989	True	NA	NA	False	NA	NA	NA	118591797	118634998	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118591896_118595911_118596023_118597093_118597226_118605583_118605820_118608657_118608723_118610948_118611139_118617995_118618120_118619978_118620077_118620413_118620611_118621462_118621528_118628035_118628227_118630288_118630347_118630439
WTC11_00070277	chr4	+	909	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-332	-185747	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAGAATAGTGGCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	118850355	118851700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118850589_118850711_118850941_118851253
WTC11_00070278	chr4	+	3205	1	Genic_Genomic	ENSG00000172403.11	novel	NA	NA	NA	NA	30757	49	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTACAAAGATTTACTC	NA	False	NA	NA	False	TATAAA	-18	NA	119058091	119061296	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_119058100_119061300
WTC11_00070279	chr4	+	423	2	FSM	ENSG00000145390.12	ENST00000514665.1	4233	2	-12	3822	-12	-2538	multi-exon	FALSE	canonical	3	40	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGGAATTTGGAAAGC	119212439	False	NA	NA	False	AAAAAG	-10	NA	119212574	119217673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119212874_119217549
WTC11_00070280	chr4	+	5936	19	FSM	ENSG00000145390.12	ENST00000692078.1	6631	19	-77	772	49	38	multi-exon	FALSE	canonical	2	4	junction_1	18.6472286359788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCTTGGCCAAATTTT	119209542	True	NA	6	True	TATAAA	-21	NA	119212635	119294746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119235289_119235412_119239217_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
WTC11_00070281	chr4	+	6586	18	NNC	ENSG00000145390.12	novel	6631	19	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	18.2514160231805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTGGACTTCTCTTT	119209542	True	NA	2	True	GATAAA	-16	NA	119212635	119295517	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_119212874_119214069_119214223_119217549_119217674_119239217_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260656_119261715_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
WTC11_00070282	chr4	+	444	3	NNC	ENSG00000250412.1	novel	521	4	NA	NA	9839	61	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCTGGAAAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	119344167	119378294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_119344265_119354109_119354232_119378069
WTC11_00070283	chr4	+	624	3	FSM	ENSG00000245958.7	ENST00000511950.1	605	3	-19	0	10	0	multi-exon	FALSE	canonical	2	10	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACATCCATGCTGAGAA	119451283	True	NA	NA	False	CATAAA	-10	NA	119454771	119460244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119457970_119458171_119460182
WTC11_00070285	chr4	+	2160	9	NIC	ENSG00000245958.7	novel	1779	10	NA	NA	1	320	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	38.5186643070603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGACAACTTCTTCTT	119451338	True	NA	NA	False	ATTAAA	-31	NA	119454826	119500599	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497661_119497904_119499560
WTC11_00070288	chr4	+	492	4	FSM	ENSG00000138688.17	ENST00000449251.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.79271573232759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGATATTTACATTGTTGA	122219456	True	NA	NA	False	AATATA	-27	NA	122219468	122229195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_122219568_122220332_122220471_122224497_122224678_122229120
WTC11_00070290	chr4	+	10097	52	NIC	ENSG00000138688.17	novel	16162	88	NA	NA	959	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.0972335097204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	NA	False	NA	5	True	AATAAA	-19	NA	122247178	122362752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_122247358_122249484_122249683_122250361_122250574_122254194_122254347_122254804_122254956_122255130_122255284_122257254_122257496_122258700_122258844_122262763_122262984_122263441_122263601_122264251_122264428_122266782_122266959_122271017_122271725_122272159_122272406_122274342_122274437_122279774_122279982_122281535_122281775_122286540_122286786_122289086_122289193_122301299_122301398_122304797_122304984_122305876_122306046_122307948_122308161_122309265_122309465_122313627_122313688_122315461_122315689_122316731_122316863_122318146_122318271_122324426_122324537_122325229_122325321_122325854_122325918_122328103_122328358_122331325_122331542_122333628_122333810_122334343_122334441_122336191_122336354_122336880_122337021_122339206_122339409_122343409_122343611_122344381_122344562_122346622_122346761_122347521_122347780_122348566_122348718_122349157_122349316_122349449_122349643_122349856_122350075_122352903_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
WTC11_00070291	chr4	+	10148	53	NIC	ENSG00000138688.17	novel	16162	88	NA	NA	959	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	24.4427237754333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	NA	False	NA	5	True	AATAAA	-19	NA	122247178	122362752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_122247358_122249484_122249683_122250361_122250574_122254194_122254347_122254804_122254956_122255130_122255284_122257254_122257496_122258700_122258844_122262763_122262984_122263441_122263601_122264251_122264428_122266782_122266959_122271017_122271725_122272159_122272406_122274342_122274437_122275971_122276023_122279774_122279982_122281535_122281775_122286540_122286786_122289086_122289193_122301299_122301398_122304797_122304984_122305876_122306046_122307948_122308161_122309265_122309465_122313627_122313688_122315461_122315689_122316731_122316863_122318146_122318271_122324426_122324537_122325229_122325321_122325854_122325918_122328103_122328358_122331325_122331542_122333628_122333810_122334343_122334441_122336191_122336354_122336880_122337021_122339206_122339409_122343409_122343611_122344381_122344562_122346622_122346761_122347521_122347780_122348566_122348718_122349157_122349316_122349449_122349643_122349856_122350075_122352903_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
WTC11_00070293	chr4	+	2111	6	FSM	ENSG00000138688.17	ENST00000688322.1	2117	6	13	-7	13	0	multi-exon	FALSE	canonical	3	55	junction_1	16.1443488564885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	NA	False	NA	5	True	AATAAA	-19	NA	122352466	122362752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
WTC11_00070294	chr4	+	1269	2	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGGGATCACACAAGAA	NA	False	NA	NA	False	NA	NA	NA	125549006	125584282	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_125550254_125584260
WTC11_00070296	chr4	+	569	6	FSM	ENSG00000164074.16	ENST00000513371.1	569	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	23.4145254062516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACCTGTATGCATTCAT	127965447	True	NA	NA	False	TTTAAA	-44	NA	127965473	128008957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127965607_127965953_127966057_127982938_127983048_127984338_127984424_127989720_127989822_128008919
WTC11_00070297	chr4	+	1493	11	FSM	ENSG00000164074.16	ENST00000611882.1	1493	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	23.8539304937362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACAGAGTTACTTTT	127965479	False	NA	NA	False	NA	NA	NA	127965505	128030805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509
WTC11_00070298	chr4	+	4833	20	FSM	ENSG00000138709.19	ENST00000326639.11	4847	20	0	14	0	-14	multi-exon	FALSE	canonical	1	1	junction_13	57.8126691058394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAACCAAAATTGGTG	128059011	True	NA	NA	False	AATAAA	-18	NA	128061311	128211974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128162193_128162318_128176871_128176908_128178430_128178643_128179405_128179513_128199438_128199600_128200520_128200666_128206427_128206538_128207255_128207384_128209855
WTC11_00070299	chr4	+	5648	11	NIC	ENSG00000077684.16	novel	5644	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	32	junction_1	193.776804597454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128808284	True	NA	13	True	AATAAA	-22	NA	128811272	128875224	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
WTC11_00070300	chr4	+	296	1	FSM	ENSG00000138650.9	ENST00000618019.1	4574	1	3510	768	-2068	-768	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGCACTGGCAAAGGT	133152795	False	NA	NA	False	NA	NA	NA	133152824	133153120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_133152800_133153100
WTC11_00070302	chr4	+	279	1	FSM	ENSG00000272717.1	ENST00000608402.1	845	1	598	-32	598	32	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATGAAAAAGAGAACAAT	139557380	False	NA	54	True	NA	NA	NA	139557396	139557675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139557400_139557700
WTC11_00070303	chr4	+	1615	8	FSM	ENSG00000164136.17	ENST00000296545.11	2472	8	343	514	-2	15	multi-exon	FALSE	canonical	3	4	junction_1	6.87497680886627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTTGGTGGTGGTGG	141636902	False	NA	23	True	AATAAA	-34	NA	141636944	141733473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_141637225_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
WTC11_00070305	chr4	+	5537	3	ISM	ENSG00000109458.9	ENST00000505913.5	2477	10	78384	-4718	-5668	-280	3prime_fragment	FALSE	canonical	3	32	junction_1	2.5	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCCTCTGATTTTGTGT	NA	False	NA	93	True	NA	NA	NA	143460328	143474285	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_143460488_143466102_143466226_143469030
WTC11_00070307	chr4	+	850	1	FSM	ENSG00000251333.3	ENST00000536295.1	711	1	-139	0	-139	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGGAACCAGAAATGC	NA	False	NA	NA	False	AAAAAG	-10	NA	145375403	145376253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145375400_145376300
WTC11_00070308	chr4	+	1527	1	FSM	ENSG00000278943.1	ENST00000624774.1	1049	1	-655	177	-655	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAAGAGATCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	145376253	145377780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145376300_145377800
WTC11_00070309	chr4	+	3342	8	NNC	ENSG00000170365.10	novel	3002	7	NA	NA	-175	13995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.6615810801621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAACCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	145481522	145573171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_145482039_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790_145559172_145573156
WTC11_00070311	chr4	+	564	5	NIC	ENSG00000237136.8	novel	904	6	NA	NA	-5634	-34	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	8.61684396980704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATGTTAAAACTAAATAA	NA	False	NA	NA	False	NA	NA	NA	145726818	145754317	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_145726970_145729168_145729230_145729891_145729966_145732452_145732620_145754206
WTC11_00070312	chr4	+	452	1	FSM	ENSG00000279845.1	ENST00000625025.1	466	1	-4	18	-4	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTTTACTTAAATT	146164696	False	NA	NA	False	NA	NA	NA	146180846	146181298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146180800_146181300
WTC11_00070313	chr4	+	872	6	NNC	ENSG00000145425.10	novel	869	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	7719.59214984833	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081747	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_151099715_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104291_151104471
WTC11_00070314	chr4	+	865	6	FSM	ENSG00000145425.10	ENST00000506126.5	862	6	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATTTGTGATGGTTT	151081794	True	NA	-1	True	AATAAA	-2	NA	151099670	151104623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151100426_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
WTC11_00070315	chr4	+	671	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7820.27014878642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081794	True	NA	13	True	AATAAA	-16	NA	151099670	151104637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
WTC11_00070317	chr4	+	2975	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	5	20	5	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGGTTACACAGTCACA	152535888	True	NA	18	True	AATAAA	-19	NA	152536268	152539243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152536300_152539200
WTC11_00070318	chr4	+	3095	10	NNC	ENSG00000164144.16	novel	3542	9	NA	NA	0	13503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	101.0082504881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATCACTACTTAGCA	152773975	True	NA	NA	False	NA	NA	NA	152779984	152931966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063_152911911_152931935
WTC11_00070319	chr4	+	2864	9	NNC	ENSG00000164144.16	novel	3424	9	NA	NA	0	13503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	113.84082912119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATCACTACTTAGCA	152773975	True	NA	NA	False	NA	NA	NA	152779984	152931966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063_152911911_152931935
WTC11_00070323	chr4	+	7188	12	ISM	ENSG00000109654.16	ENST00000675384.1	7543	13	18027	10	-7	0	3prime_fragment	FALSE	canonical	3	11	junction_1	36.3649999744328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	153222020	True	NA	-8	True	NA	NA	NA	153222472	153339301	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_153223040_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
WTC11_00070324	chr4	+	7148	12	FSM	ENSG00000109654.16	ENST00000676033.1	7314	12	166	0	-7	0	multi-exon	FALSE	canonical	2	8	junction_2	48.4957184784781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153222020	True	NA	2	True	AATAAA	-9	NA	153222472	153339311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153223040_153270334_153270520_153275942_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
WTC11_00070326	chr4	+	775	3	ISM	ENSG00000109654.16	ENST00000675019.1	8088	11	-8	63033	-8	0	5prime_fragment	FALSE	canonical	3	11	junction_1	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153256516	True	NA	4	True	ATTAAA	-17	NA	153257390	153276268	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_153257608_153270337_153270520_153275892
WTC11_00070327	chr4	+	5912	35	NNC	ENSG00000121210.16	novel	5017	35	NA	NA	-39	895	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_33	38.5523954798121	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTTTGTCTTTA	153461233	True	NA	1	True	AATAAA	-11	NA	153466306	153637606	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635470_153635572_153636300
WTC11_00070335	chr4	+	4169	14	FSM	ENSG00000171503.13	ENST00000683081.1	4169	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.2216099905135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTCTATTTTAAAAAAT	158672366	False	NA	NA	False	TATAAA	-4	NA	158672376	158710718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158672491_158680466_158680608_158681570_158681615_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
WTC11_00070341	chr4	+	8138	4	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	112.756374542639	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATTACAAGTAGAATT	166705733	True	NA	NA	False	ATTAAA	-20	NA	166716482	166732757	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_166716724_166718561_166718831_166721972_166722079_166725235
WTC11_00070344	chr4	+	3098	8	NNC	ENSG00000129116.19	novel	3829	8	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	31.1710226502312	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTTGCAGTTTTGTG	168898565	True	NA	-27	True	AATAAA	-11	NA	168898576	168928413	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921615_168924254_168924421_168924944_168925079_168926212
WTC11_00070349	chr4	+	1251	6	NIC	ENSG00000109674.4	novel	2363	10	NA	NA	12	-2419	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	38.1439379194126	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCAACTTTCGAGTTT	177307175	True	NA	NA	False	AATAAA	-18	NA	177309885	177351860	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177351379
WTC11_00070353	chr4	+	9028	29	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	118	-1898	combination_of_known_junctions	FALSE	canonical	2	17	junction_3	43.0304086830299	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGTGATTTTTTTA	182143175	False	NA	NA	False	AATAAA	-13	NA	182144104	182801126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144162_182323945_182324253_182346650_182346930_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182744142_182744164_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
WTC11_00070356	chr4	+	2264	14	NNC	ENSG00000109794.14	novel	2070	14	NA	NA	16	452	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	19.2707277170729	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCGTAGCACAGATCTGT	186144721	True	NA	NA	False	AATAAA	-18	NA	186144878	186168107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_186145113_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186167732
WTC11_00070361	chr4	-	310	1	FSM	ENSG00000251689.1	ENST00000507882.1	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTTTTTTTGAGA	-270162	False	NA	NA	False	ATTAAA	-24	NA	270175	269865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_269900_270200
WTC11_00070362	chr4	-	487	1	FSM	ENSG00000248564.1	ENST00000508039.1	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCGGCGGCAGCGGGG	NA	False	NA	NA	False	NA	NA	NA	338583	338096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_338100_338600
WTC11_00070363	chr4	-	407	1	FSM	ENSG00000272885.1	ENST00000609771.1	420	1	19	-6	19	6	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTACTGGCTGGAATA	NA	False	NA	NA	False	AATAAA	-35	NA	416518	416111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_416100_416500
WTC11_00070364	chr4	-	6382	1	FSM	ENSG00000251595.7	ENST00000504019.1	2110	1	-632	-3640	-632	3302	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGAGATTTCGCCACT	NA	False	NA	NA	False	NA	NA	NA	428514	422132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_422100_428500
WTC11_00070365	chr4	-	367	3	NNC	ENSG00000182903.16	novel	4492	2	NA	NA	4	-42893	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTCCTGGACCTTCAAG	-498757	True	NA	NA	False	NA	NA	NA	499152	486975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_487086_497126_497287_499055
WTC11_00070366	chr4	-	284	1	FSM	ENSG00000273238.3	ENST00000610212.3	2416	1	1532	600	1532	-600	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGAGCAGCTGGTAATTC	NA	False	NA	NA	False	NA	NA	NA	574763	574479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_574500_574800
WTC11_00070367	chr4	-	330	5	NNC	ENSG00000169020.10	novel	303	4	NA	NA	9	56016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6354.15597758664	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAATTTGAGGAGCCAA	-636072	True	NA	NA	False	ACTAAA	-43	NA	674267	616419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_616458_672437_672520_673302_673402_673911_673967_674211
WTC11_00070368	chr4	-	894	1	FSM	ENSG00000272927.1	ENST00000609172.1	737	1	-203	46	-203	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCAAATTGCTTGGAA	-661744	False	NA	-61	True	NA	NA	NA	662148	661254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_661300_662100
WTC11_00070369	chr4	-	1475	6	FSM	ENSG00000169026.13	ENST00000512400.1	1472	6	0	-3	0	3	multi-exon	FALSE	canonical	2	3	junction_5	8.68562030024339	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGGTGTGGTTTCTGC	-685080	False	NA	-2	True	NA	NA	NA	685101	681825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684603_684718
WTC11_00070371	chr4	-	2210	3	FSM	ENSG00000178950.18	ENST00000511345.5	3567	3	1359	-2	-548	0	multi-exon	FALSE	canonical	3	350	junction_1	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTCTCCAGTGTGGA	-852455	False	NA	-2	True	ATTAAA	-16	NA	852469	849275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935
WTC11_00070372	chr4	-	4529	29	NNC	ENSG00000178950.18	novel	4461	28	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	70.8204109861338	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTCTCCAGTGTGGA	-926768	True	NA	-2	True	ATTAAA	-16	NA	932254	849275	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877349_877479_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
WTC11_00070373	chr4	-	4872	23	NIC	ENSG00000145214.14	novel	4649	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	14.2060544653002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCCTCATCTTTG	-972827	True	NA	-2	True	AATACA	-21	NA	973569	958886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_960722_961048_961202_961466_961579_961687_961835_961981_962083_962434_962614_962771_962921_963138_963291_965175_965292_965490_965530_965927_966302_966465_966528_966747_966803_966963_967055_967128_967362_967548_967650_967727_967803_967879_968028_968281_968408_968478_968565_968810_968911_970992_971073_973211
WTC11_00070375	chr4	-	464	5	FSM	ENSG00000178222.13	ENST00000503206.5	470	5	0	6	0	-6	multi-exon	FALSE	canonical	1	1	junction_1	3.03108891324554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATCAGGACGAGCATA	NA	False	NA	-19	True	AATAAA	-10	NA	1081603	1056259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1056504_1058320_1058394_1073598_1073663_1079642_1079689_1081566
WTC11_00070377	chr4	-	2374	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	398.208767133802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGACTTTCTCTCATGA	-1248688	False	NA	3	True	AATAAA	-36	NA	1248740	1211426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212427_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
WTC11_00070378	chr4	-	1834	9	NNC	ENSG00000163950.13	novel	1810	8	NA	NA	0	19971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.98003333796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATTCAGGTTCCTGTGT	-1703857	True	NA	NA	False	NA	NA	NA	1712317	1672759	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1672786_1692730_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
WTC11_00070379	chr4	-	1768	9	NNC	ENSG00000163950.13	novel	1810	8	NA	NA	0	3393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.98003333796	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGAGAAGGATGGTATT	-1703857	True	NA	NA	False	NA	NA	NA	1712317	1689337	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1689367_1692799_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
WTC11_00070380	chr4	-	1100	3	FSM	ENSG00000168936.11	ENST00000460722.1	1100	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	147.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGTCAGAGCGCCCTC	-1718221	False	NA	NA	False	GGGGCT	-26	NA	1718235	1716600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1717515_1717704_1718151
WTC11_00070381	chr4	-	761	4	FSM	ENSG00000168936.11	ENST00000480360.1	761	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGATTGACAAGTTTGC	-1720767	False	NA	NA	False	NA	NA	NA	1720781	1718384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1718627_1718754_1718882_1718985_1719229_1720632
WTC11_00070382	chr4	-	563	2	FSM	ENSG00000168924.15	ENST00000510940.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAAGGAGGATGTGC	-1822617	False	NA	NA	False	NA	NA	NA	1822642	1819371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1819473_1822180
WTC11_00070383	chr4	-	251	3	FSM	ENSG00000130997.16	ENST00000510344.1	468	3	0	217	0	-217	multi-exon	FALSE	canonical	2	6	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCCTGTGCACTTTCTG	NA	False	NA	NA	False	NA	NA	NA	2159211	2156713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2156854_2157857_2157912_2159154
WTC11_00070384	chr4	-	3445	10	ISM	ENSG00000159733.14	ENST00000515312.5	3247	13	25255	-902	3902	4	3prime_fragment	FALSE	canonical	2	7	junction_4	3.68178700572909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTTTCTTCCATGAAC	NA	False	NA	-14	True	CATAAA	-22	NA	2339622	2269592	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452
WTC11_00070385	chr4	-	574	2	FSM	ENSG00000159733.14	ENST00000514248.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCAGGGTGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	2271751	2270917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2271415_2271674
WTC11_00070386	chr4	-	920	3	ISM	ENSG00000159733.14	ENST00000503000.1	1874	7	-44	11044	-2	110	5prime_fragment	FALSE	canonical	2	9	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACCTAAAAGTGGTTTT	-2418139	True	NA	NA	False	AATGAA	-45	NA	2418653	2341205	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_2341616_2353932_2354074_2418284
WTC11_00070387	chr4	-	504	2	Antisense	novelGene_ENSG00000063978.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAACACGGGATATGAG	-2468462	False	NA	-8	True	ATTAAA	-12	NA	2468719	2464528	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_2464713_2468399
WTC11_00070388	chr4	-	1737	14	NNC	ENSG00000109736.15	novel	1717	13	NA	NA	0	50097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.837394155019	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAATATCTTGT	-2927333	True	NA	NA	False	NA	NA	NA	2934816	2880463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2880494_2930567_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
WTC11_00070391	chr4	-	787	4	ISM	ENSG00000253917.4	ENST00000514073.1	682	6	-28	6197	-28	-6197	5prime_fragment	TRUE	canonical	2	6	junction_2	16.8193010820572	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCGGGCACAGTGGCTC	-3954654	True	NA	NA	False	AATAAA	-19	NA	3955447	3921379	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_3921783_3924070_3924268_3953110_3953174_3955323
WTC11_00070392	chr4	-	2529	3	NIC	ENSG00000251669.6	novel	987	8	NA	NA	4576	150	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCAGGTGGGGTTGTGTC	-3947796	False	NA	NA	False	CATAAA	-14	NA	3948589	3941609	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_3943373_3947741_3948008_3948089
WTC11_00070394	chr4	-	2479	3	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	0	5993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCT	-4107416	False	NA	-2	True	TTTAAA	-6	NA	4107497	4042217	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4043284_4047976_4049172_4107279
WTC11_00070395	chr4	-	610	3	FSM	ENSG00000251580.3	ENST00000667300.1	1607	3	0	997	0	-997	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATACCTTGGCGGAGAG	-6673466	False	NA	NA	False	AAGAAA	-31	NA	6673729	6659103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6659571_6661939_6662037_6673683
WTC11_00070396	chr4	-	1520	5	NNC	ENSG00000109519.13	novel	2653	4	NA	NA	0	70013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	399.708018433456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	-7051333	True	NA	NA	False	AAAAAG	-4	NA	7068064	6988881	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_6988910_7060055_7061209_7062384_7062467_7064060_7064224_7067970
WTC11_00070397	chr4	-	1129	1	FSM	ENSG00000173013.6	ENST00000310085.6	2153	1	55	969	55	-969	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCGGCTGGAGAACATTC	-7042908	True	NA	NA	False	GATAAA	-21	NA	7042946	7041817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7041800_7042900
WTC11_00070398	chr4	-	1817	2	FSM	ENSG00000163995.21	ENST00000509819.1	1944	2	88	39	88	-39	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCCAGGAAGCCTGGAAA	NA	False	NA	-54	True	NA	NA	NA	7983344	7965367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7967104_7983263
WTC11_00070399	chr4	-	3056	15	NNC	ENSG00000071127.17	novel	3142	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	423.642616277601	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10084417	True	NA	-10	True	ATTAAA	-15	NA	10116868	10074339	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083174_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
WTC11_00070400	chr4	-	4361	6	FSM	ENSG00000038219.13	ENST00000482713.1	4367	6	0	6	0	-6	multi-exon	FALSE	canonical	1	2	junction_4	23.4350165350912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCATTTTACATAATA	-13623166	True	NA	NA	False	NA	NA	NA	13627701	13613511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13623389_13626313_13627344
WTC11_00070401	chr4	-	403	1	FSM	ENSG00000273133.1	ENST00000609724.1	556	1	48	105	48	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAGGAGAACTATCTTA	NA	False	NA	NA	False	AATGAA	-36	NA	15564205	15563802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15563800_15564200
WTC11_00070403	chr4	-	400	3	FSM	ENSG00000169762.17	ENST00000508886.1	676	3	276	0	276	0	multi-exon	TRUE	canonical	3	11	junction_2	21	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGAAAGATTTGTTAGA	NA	False	NA	NA	False	ATTAAA	-11	NA	16174272	16163367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16163538_16166632_16166794_16174203
WTC11_00070404	chr4	-	472	3	FSM	ENSG00000169762.17	ENST00000507728.1	562	3	90	0	90	0	multi-exon	FALSE	canonical	3	11	junction_1	20.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCCAGTAAATCACAGAA	NA	False	NA	NA	False	NA	NA	NA	16174951	16166672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16166794_16174203_16174273_16174669
WTC11_00070405	chr4	-	2718	2	FSM	ENSG00000169744.13	ENST00000509803.1	2718	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGTGAATCTGGCTA	-16507207	False	NA	-10	True	AATAAA	-15	NA	16507227	16501543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16505839
WTC11_00070406	chr4	-	423	3	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTGGCGGTGCAAAGG	NA	False	NA	NA	False	AAGAAA	-34	NA	16975310	16903129	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16903216_16930970_16931020_16975022
WTC11_00070409	chr4	-	863	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	5	143	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCCTTACTGTGTTT	-17802533	True	NA	NA	False	NA	NA	NA	17810706	17804168	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_17804772_17810446
WTC11_00070411	chr4	-	3302	20	NIC	ENSG00000152990.14	novel	2870	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	98.5287617780053	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTGTGTGGAGTCTCT	-22512293	True	NA	NA	False	AATAAA	-17	NA	22515997	22345070	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_22345346_22346732_22346824_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
WTC11_00070412	chr4	-	2131	6	NNC	ENSG00000152990.14	novel	4577	19	NA	NA	4037	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	133.736158162256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-22409267	False	NA	-2	True	AATAAA	-21	NA	22409278	22387375	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22409210
WTC11_00070415	chr4	-	445	3	NNC	ENSG00000289201.1	novel	861	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGCTTATGAAGGTAA	-24472805	False	NA	-1	True	ATTAAA	-20	NA	24473029	24469021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24469353_24472374_24472465_24473005
WTC11_00070416	chr4	-	562	1	FSM	ENSG00000207697.1	ENST00000384964.1	99	1	-367	-96	-367	96	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACAGTCACTGTTTTAA	-24520610	False	NA	NA	False	TTTAAA	-16	NA	24520657	24520095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24520100_24520700
WTC11_00070418	chr4	-	324	2	FSM	ENSG00000240005.6	ENST00000472346.1	327	2	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACTAGTTGCCAGCAT	-26860139	False	NA	-3	True	AATAAA	-23	NA	26860244	26859811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_26860029_26860137
WTC11_00070420	chr4	-	239	1	FSM	ENSG00000206675.1	ENST00000383948.1	107	1	-166	34	-166	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACGCAAATTCGTGAAG	-39297852	False	NA	NA	False	ACTAAA	-45	NA	39297877	39297638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39297600_39297900
WTC11_00070422	chr4	-	837	1	Genic_Genomic	ENSG00000249019.2	novel	NA	NA	NA	NA	323	550	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTCCTACAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	39714128	39713291	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_39713300_39714100
WTC11_00070424	chr4	-	670	1	FSM	ENSG00000205794.4	ENST00000507914.2	937	1	472	-205	472	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCAGAGGTTGCAGT	NA	False	NA	NA	False	NA	NA	NA	40043663	40042993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40043000_40043700
WTC11_00070425	chr4	-	4758	8	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	164	junction_1	100.485555871356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40629515	False	NA	-17	True	AATAAA	-17	NA	40629529	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40423693_40423713_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40629395
WTC11_00070428	chr4	-	4890	8	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	121	junction_4	116.31466821006	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40626550	True	NA	-17	True	AATAAA	-17	NA	40630731	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40423693_40423713_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462
WTC11_00070429	chr4	-	4853	9	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_8	137.978259157014	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40630715	True	NA	-17	True	AATAAA	-17	NA	40630851	40423279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40423693_40423713_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462_40630622_40630778
WTC11_00070431	chr4	-	3486	17	NIC	ENSG00000163697.17	novel	8899	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	80.4032804057148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCAAACTTCTGCCT	-41212331	True	NA	-8	True	AATAAA	-24	NA	41214513	40815312	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945074_41013582_41014399_41033235_41033305_41100638_41100751_41142986_41143143_41214404
WTC11_00070432	chr4	-	10502	2	ISM	ENSG00000188848.17	ENST00000504360.5	8692	6	29161	-113	28938	26	3prime_fragment	FALSE	canonical	3	37	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAAAATGTTACATGC	NA	False	NA	28	True	NA	NA	NA	42123717	42110826	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_42117736_42120124
WTC11_00070433	chr4	-	3131	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	17.4491324203303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACAGGCTTACTGTGTC	-44725566	True	NA	NA	False	AATAAA	-23	NA	44726556	44703247	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_44705492_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
WTC11_00070434	chr4	-	3611	10	FSM	ENSG00000151834.16	ENST00000381620.9	8520	10	0	4909	0	-13	multi-exon	FALSE	canonical	1	2	junction_8	1.15470053837925	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGCCAATAAATGTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	46390128	46248456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_46250605_46261925_46262129_46303459_46303613_46305567_46305712_46310172_46310256_46312495_46312717_46332614_46332683_46386073_46386190_46388635_46388717_46389734
WTC11_00070435	chr4	-	4618	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	-13	-882	-13	882	multi-exon	FALSE	canonical	2	7	junction_22	27.0246291096177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTTGCATTTCTCTG	-47914670	False	NA	NA	False	NA	NA	NA	47914680	47846350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
WTC11_00070436	chr4	-	5211	19	Fusion	ENSG00000135605.13_ENSG00000074966.11	novel	3661	18	NA	NA	0	1673	multi-exon	TRUE	canonical	1	1	junction_1	24.536757510637	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTTATTCTTGAACAG	-48268889	True	NA	NA	False	GGGGCT	-9	NA	48269838	48134109	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_48136403_48136525_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
WTC11_00070437	chr4	-	10644	54	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	-238	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_22	11.0272325449575	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAACAAATTCATTAG	NA	False	NA	2	True	AATAAA	-25	NA	48606084	48497356	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740
WTC11_00070438	chr4	-	1240	9	FSM	ENSG00000109189.13	ENST00000508499.5	1419	9	179	0	115	0	multi-exon	FALSE	canonical	1	1	junction_8	56.9296440793371	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGCAGGCTTTCCTCT	-52656400	False	NA	NA	False	NA	NA	NA	52656411	52597580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52656295
WTC11_00070439	chr4	-	1499	2	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	95368	1658	45534	-1658	3prime_fragment	FALSE	canonical	3	30	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGAAGAATTACTCTAA	NA	False	NA	NA	False	NA	NA	NA	53462849	53460958	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_53461043_53461434
WTC11_00070440	chr4	-	1134	7	NNC	ENSG00000109220.11	novel	1109	6	NA	NA	0	81607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.4758905129419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAGCTAACAAACAAAAAC	-54062358	True	NA	NA	False	AAAAAG	-3	NA	54064605	53928181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_53928213_54009794_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
WTC11_00070441	chr4	-	10648	24	NIC	ENSG00000134852.15	novel	4059	24	NA	NA	16	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_23	11.2994972871097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTCCCTTTCTTTTA	-55546596	False	NA	2	True	ATTAAA	-21	NA	55546630	55427902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55486392_55486550_55489373_55489466_55509911_55510066_55546481
WTC11_00070442	chr4	-	273	1	FSM	ENSG00000223305.1	ENST00000411373.1	334	1	58	3	58	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACCAATAAAGGTTAGAC	-55540743	False	NA	NA	False	ATTAAA	-17	NA	55540777	55540504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55540500_55540800
WTC11_00070443	chr4	-	3245	14	FSM	ENSG00000157426.14	ENST00000513376.5	3241	14	0	-4	0	1	multi-exon	FALSE	canonical	3	7	junction_13	20.1647064103444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTCTACACTTGATTA	-56386145	True	NA	NA	False	ATTAAA	-29	NA	56387423	56338285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56387361
WTC11_00070444	chr4	-	1370	1	FSM	ENSG00000269949.1	ENST00000602820.1	447	1	-982	59	-982	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTCCTCTTCTAAGT	-56962336	False	NA	-62	True	NA	NA	NA	56962355	56960985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56961000_56962400
WTC11_00070445	chr4	-	1417	5	FSM	ENSG00000163453.11	ENST00000295666.6	1427	5	10	0	10	0	multi-exon	FALSE	canonical	1	2	junction_1	0.433012701892219	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTACCTCAGCTTATG	-57110340	False	NA	NA	False	AATAAA	-23	NA	57110375	57030772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_57031337_57032425_57032553_57033194_57033312_57040823_57040934_57109876
WTC11_00070446	chr4	-	3070	4	NNC	ENSG00000289308.1	novel	1948	3	NA	NA	13	987	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	29.5334085777823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGCAGGCTCTTTTT	-61763990	True	NA	NA	False	NA	NA	NA	61769635	61748400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_61751029_61752123_61752176_61767481_61767631_61769394
WTC11_00070447	chr4	-	3638	5	NNC	ENSG00000289308.1	novel	1948	3	NA	NA	-321	987	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	28.9859879942016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGCAGGCTCTTTTT	-61769922	False	NA	NA	False	NA	NA	NA	61769970	61748400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_61751029_61752123_61752176_61760707_61760812_61767481_61767760_61769394
WTC11_00070448	chr4	-	4744	19	NNC	ENSG00000145241.11	novel	3436	20	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	1	junction_10	25.6693120329882	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGACTTGTATTTGAT	-67542838	True	NA	-12	True	AATAAA	-16	NA	67545491	67472482	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67510747_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
WTC11_00070449	chr4	-	1198	1	FSM	ENSG00000279464.1	ENST00000623308.1	2458	1	-362	1622	-362	-1622	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCCTTAATCTGGGACT	-67610659	False	NA	NA	False	NA	NA	NA	67610675	67609477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67609500_67610700
WTC11_00070450	chr4	-	3561	9	FSM	ENSG00000132463.15	ENST00000505068.5	3561	9	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_4	69.6095135380215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTAAGAGTATTTAT	-70831725	True	NA	-14	True	AATAAA	-23	NA	70839897	70819530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
WTC11_00070451	chr4	-	2328	8	NNC	ENSG00000163626.17	novel	6824	6	NA	NA	0	1056	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.0943053321703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAGATAAATTTAAAAA	-73064990	True	NA	NA	False	AAAAAG	-4	NA	73069716	73051305	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73051340_73056080_73057164_73057971_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
WTC11_00070453	chr4	-	425	2	FSM	ENSG00000260265.1	ENST00000562355.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTTATATGTGTCT	NA	False	NA	-96	True	NA	NA	NA	75083496	75082018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75082358_75083410
WTC11_00070454	chr4	-	698	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTTATATGTGTCT	-75126590	True	NA	-96	True	NA	NA	NA	75127280	75082018	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127131
WTC11_00070458	chr4	-	1652	11	Fusion	ENSG00000138744.16_ENSG00000198301.12	novel	1425	7	NA	NA	0	2808	multi-exon	FALSE	canonical	2	7	junction_1	11.9285372112426	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGCCTATTTGGTGG	-75940543	True	NA	-5	True	ATTAAA	-15	NA	75940983	75910851	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_75911354_75914867_75914986_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
WTC11_00070459	chr4	-	554	2	FSM	ENSG00000138744.16	ENST00000507940.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATGTCTTACGCAAGC	-75939784	False	440	NA	False	NA	NA	NA	75940224	75936163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75936236_75939742
WTC11_00070460	chr4	-	464	2	FSM	ENSG00000138744.16	ENST00000503636.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTTGCGGGGGCCCCCG	-75940571	True	NA	NA	False	NA	NA	NA	75941011	75939969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75940166_75940743
WTC11_00070461	chr4	-	537	2	FSM	ENSG00000138750.15	ENST00000514313.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGAGAAATAGTGAA	-76134300	False	68	NA	False	NA	NA	NA	76134311	76132319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76132720_76134174
WTC11_00070462	chr4	-	407	1	FSM	ENSG00000234036.4	ENST00000510190.1	310	1	-18	-79	-18	79	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAGATTATAAACCTAA	NA	False	NA	NA	False	CATAAA	-2	NA	76959187	76958780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76958800_76959200
WTC11_00070463	chr4	-	1961	1	FSM	ENSG00000249565.2	ENST00000510079.2	1181	1	-355	-425	-355	425	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATACATGCTTTGCAT	NA	False	NA	NA	False	TTTAAA	-16	NA	78182401	78180440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78180400_78182400
WTC11_00070466	chr4	-	4092	14	NNC	ENSG00000138669.10	novel	1640	14	NA	NA	-117	131	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	4.94346738863373	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATTTTCCTAATCATTA	NA	False	NA	NA	False	NA	NA	NA	81154370	81087238	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_81089804_81092385_81092453_81104369_81104433_81105812_81105936_81110447_81110612_81135154_81135297_81137392_81137483_81140532_81140670_81142816_81142948_81144231_81144331_81148883_81148953_81151959_81152055_81153643_81153722_81154101
WTC11_00070467	chr4	-	1995	1	Genic_Genomic	ENSG00000273156.2	novel	NA	NA	NA	NA	-32	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCATTTTTTGCACTG	-82346553	False	NA	-7	True	ATTAAA	-12	NA	82346874	82344879	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_82344900_82346900
WTC11_00070468	chr4	-	1522	7	NIC	ENSG00000138668.19	novel	1585	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	1681	junction_6	2004.68814421484	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-82287571	True	NA	-29	True	AATAAA	-17	NA	82373980	82353828	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
WTC11_00070469	chr4	-	1089	7	FSM	ENSG00000138668.19	ENST00000514671.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2864.64989134798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-82359267	False	NA	30	True	AATAAA	-12	NA	82359639	82353833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82354894_82355002_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470
WTC11_00070470	chr4	-	2661	2	ISM	ENSG00000249242.8	ENST00000449862.7	3178	8	71811	0	71778	0	3prime_fragment	FALSE	canonical	2	7	junction_1	0	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	82490177	82483175	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_82485720_82490060
WTC11_00070471	chr4	-	297	1	FSM	ENSG00000248113.2	ENST00000506227.2	1268	1	401	570	401	-570	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTGGAGAAGGGAATT	NA	False	NA	NA	False	AAGAAA	-41	NA	82580983	82580686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82580700_82581000
WTC11_00070472	chr4	-	1890	4	FSM	ENSG00000145284.12	ENST00000273908.4	1995	4	0	105	0	-105	multi-exon	FALSE	canonical	1	1	junction_1	9.17726659862414	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTGATAAATATTCC	-82798413	True	NA	NA	False	NA	NA	NA	82798772	82659991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82661078_82680706_82680913_82705282_82705414_82798305
WTC11_00070473	chr4	-	4306	28	NNC	ENSG00000138674.17	novel	4298	27	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	217.132648640466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880969	True	NA	-4	True	ATTAAA	-14	NA	82891162	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82843296_82843448_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00070474	chr4	-	3740	25	NIC	ENSG00000138674.17	novel	3909	26	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	195.392620233382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880974	True	NA	-4	True	ATTAAA	-14	NA	82891167	82818660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
WTC11_00070477	chr4	-	2617	16	NIC	ENSG00000138674.17	novel	4012	25	NA	NA	38	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	223.9628540629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGTGTATAGT	-82864392	False	NA	-7	True	ATTAAA	-11	NA	82864417	82818663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82830936_82830976_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361
WTC11_00070479	chr4	-	1801	6	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	72.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896630	True	NA	-48	True	AATAAA	-23	NA	82900502	82893544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900333
WTC11_00070480	chr4	-	2577	4	FSM	ENSG00000251022.6	ENST00000504792.6	2577	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	100.353818506766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896636	True	NA	-48	True	AATAAA	-23	NA	82900508	82893544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82895775_82899712_82899738_82900076_82900224_82900333
WTC11_00070483	chr4	-	3709	18	NIC	ENSG00000163312.11	novel	3543	18	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_12	4.446529691521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTCAGTTATACATTA	-83454063	True	NA	-19	True	ATTAAA	-29	NA	83455882	83407366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455268
WTC11_00070488	chr4	-	445	1	FSM	ENSG00000235043.3	ENST00000513307.1	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGCTCACCCCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	86950113	86949668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86949700_86950100
WTC11_00070492	chr4	-	3844	23	NIC	ENSG00000138640.15	novel	5866	24	NA	NA	5	-144	intron_retention	FALSE	canonical	3	14	junction_20	16.5611813368711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGATTTTAAAACCAGG	-89054526	True	NA	NA	False	NA	NA	NA	89057180	88727798	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88851019_88851184_88906378_88906463_88938087_88938242_89020459_89020670_89029459_89029650_89056937
WTC11_00070495	chr4	-	1722	7	NIC	ENSG00000138640.15	novel	1511	6	NA	NA	-7	14	intron_retention	FALSE	canonical	0	0	junction_1	31.9461352209552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATCTAGTTTTGTC	-89054515	True	NA	NA	False	AATAAA	-15	NA	89057169	88855352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_88856027_88906378_88906463_88938087_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
WTC11_00070496	chr4	-	3173	5	FSM	ENSG00000145335.17	ENST00000394989.6	3167	5	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.398892669394	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89835664	True	NA	NA	False	AATAAA	-21	NA	89837199	89724098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89835546_89835693_89836961
WTC11_00070497	chr4	-	3040	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-207	7228	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	425.931919442532	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATGAAGGATGGACA	-92270218	True	NA	NA	False	AATAAA	-38	NA	92277282	92261538	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92263356_92269242_92269357_92274702_92275579_92277049
WTC11_00070498	chr4	-	4766	2	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTGAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97112946	97107394	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_97110427_97111212
WTC11_00070501	chr4	-	1289	1	FSM	ENSG00000272777.1	ENST00000609071.1	870	1	266	-685	266	685	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATTGTTGCTCACCC	-99067847	False	NA	NA	False	NA	NA	NA	99067859	99066570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99066600_99067900
WTC11_00070502	chr4	-	3569	8	NIC	ENSG00000145331.14	novel	3694	8	NA	NA	22	14	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	13.4148866440783	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATTTCCTCACATTT	-99563428	False	NA	NA	False	AATAAA	-29	NA	99563701	99546694	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563557
WTC11_00070503	chr4	-	660	3	FSM	ENSG00000145331.14	ENST00000507394.1	846	3	0	186	0	-186	multi-exon	FALSE	canonical	2	3	junction_2	24	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATATATGTGTGTATG	-99563399	False	273	NA	False	AATAAA	-7	NA	99563672	99557874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99558212_99559153_99559362_99563557
WTC11_00070504	chr4	-	4070	8	NNC	ENSG00000109270.13	novel	4163	7	NA	NA	-73	-35	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_1	134.991458535535	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTCTCAGGGCTC	-99890597	True	NA	NA	False	AATAAA	-37	NA	99894501	99878370	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_99879811_99879942_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
WTC11_00070505	chr4	-	3270	9	NNC	ENSG00000138821.14	novel	3238	8	NA	NA	0	58296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.7462094912779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGATATTGTGTCCTG	-102345117	False	NA	NA	False	NA	NA	NA	102345139	102192783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_102192817_102261666_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
WTC11_00070506	chr4	-	307	1	FSM	ENSG00000248971.2	ENST00000512037.2	1426	1	1144	-25	1144	25	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCCTGCGACTCTCC	NA	False	NA	NA	False	NA	NA	NA	102729027	102728720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102728700_102729000
WTC11_00070509	chr4	-	353	3	FSM	ENSG00000164037.17	ENST00000509614.1	391	3	0	38	0	-32	multi-exon	FALSE	canonical	1	1	junction_1	2	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTAGAACATCATTAAAA	NA	False	NA	-38	True	AATAAA	-14	NA	102910484	102901134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102901333_102906535_102906645_102910438
WTC11_00070510	chr4	-	252	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAACTTAACCCACAAG	NA	False	NA	NA	False	NA	NA	NA	103556870	103556618	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_103556600_103556900
WTC11_00070512	chr4	-	252	1	ISM	ENSG00000251259.1	ENST00000504082.1	549	2	3036	52	3036	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGCTAAATGTAATAGT	NA	False	NA	NA	False	NA	NA	NA	105137583	105137331	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_105137300_105137600
WTC11_00070514	chr4	-	1756	8	NIC	ENSG00000138785.16	novel	1927	8	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	87.2823239930781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAATTTCTATTGTTT	-105706648	True	NA	-12	True	AATAAA	-9	NA	105708653	105682634	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105707918_105708163_105708637
WTC11_00070516	chr4	-	2850	22	ISM	ENSG00000145348.17	ENST00000467183.6	3566	27	61122	-7	-3080	3	3prime_fragment	FALSE	canonical	3	10	junction_21	22.4533782538695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAAACAAGGGGGATGT	NA	False	NA	NA	False	AATAAA	-23	NA	106255087	106046087	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106254946
WTC11_00070517	chr4	-	3946	21	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	0	-9644	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.4157223935725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAAAGGAATTGTACAG	-106313266	True	NA	-5	True	AATAAA	-19	NA	106316209	106191996	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_106193771_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
WTC11_00070519	chr4	-	2124	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	-32	-6	-31	1	multi-exon	FALSE	canonical	1	1	junction_9	2.782634642844	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTACTAGAAAAGT	-108762959	True	NA	NA	False	AATAAA	-20	NA	108763085	108742046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
WTC11_00070520	chr4	-	1469	30	NIC	ENSG00000188517.17	novel	8026	39	NA	NA	-177727	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	6.35980241842676	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCTCTCCATCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	109010419	108824173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_108824228_108825195_108825223_108827134_108827189_108832379_108832434_108834354_108834391_108838097_108838179_108841694_108841722_108844518_108844570_108845188_108845252_108846138_108846220_108848758_108848804_108852235_108852281_108852901_108852926_108859655_108859734_108860926_108860972_108863318_108863388_108869087_108869151_108884177_108884223_108889220_108889257_108889700_108889734_108896666_108896712_108899153_108899181_108901118_108901173_108918171_108918217_108920577_108920605_108937807_108937844_108940538_108940647_108974366_108974394_108974532_108974560_109010357
WTC11_00070521	chr4	-	1089	4	ISM	ENSG00000188517.17	ENST00000399126.1	2674	35	-149	226262	-40	-225964	5prime_fragment	FALSE	canonical	2	4	junction_3	9.97775303139718	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAAGTCTCTCTTTCAG	-109302257	True	NA	NA	False	NA	NA	NA	109302792	109050137	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_109050180_109300582_109300653_109301722_109302076_109302168
WTC11_00070523	chr4	-	758	5	NIC	ENSG00000138794.10	novel	1634	7	NA	NA	0	-25	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	186.846695180835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAGCCAGGCGTGGT	-109698203	True	NA	NA	False	AATAGA	-35	NA	109703419	109689287	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109703355
WTC11_00070524	chr4	-	4138	3	NNC	ENSG00000164093.18	novel	2294	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATTGGTCTGGATTCT	-110623039	False	NA	-8	True	AGTAAA	-11	NA	110623051	110617428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110618689_110619287_110621370_110622255
WTC11_00070527	chr4	-	3093	16	FSM	ENSG00000138658.16	ENST00000445413.6	3089	16	0	-4	0	-2	multi-exon	FALSE	canonical	2	3	junction_5	29.1169290199972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTGTTTGCCAAAGAA	NA	False	NA	-1	True	AATAAA	-25	NA	112587750	112539334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279
WTC11_00070528	chr4	-	362	4	NNC	ENSG00000249532.6	novel	389	3	NA	NA	0	7268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5969.37724278393	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTTAACTGGCTTTAA	-112646290	True	NA	NA	False	AAAAAG	-1	NA	112648699	112639207	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_112639228_112646725_112646969_112647414_112647468_112648653
WTC11_00070530	chr4	-	427	2	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGGTATAATTCACA	-114493086	False	NA	-17	True	ATTAAA	-15	NA	114494455	114442919	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_114443206_114494314
WTC11_00070531	chr4	-	202	1	FSM	ENSG00000250215.1	ENST00000514821.1	1342	1	1078	62	1078	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAGAAAAAAATGTACA	NA	False	NA	NA	False	AAGAAA	-32	NA	114713842	114713640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_114713600_114713800
WTC11_00070532	chr4	-	879	4	FSM	ENSG00000164099.3	ENST00000515089.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.67241208569794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTATTTTCTGTTTTTTG	-118313264	False	12	NA	False	NA	NA	NA	118313276	118303277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_118303880_118305944_118306004_118308435_118308578_118313200
WTC11_00070533	chr4	-	1802	9	NIC	ENSG00000164099.3	novel	772	3	NA	NA	278	-436	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	11.1663557170636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCACTTACAGCCTGTG	-118352715	False	NA	NA	False	TATAAA	-4	NA	118352725	118303713	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_118303880_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
WTC11_00070539	chr4	-	7029	14	NNC	ENSG00000138738.11	novel	2338	15	NA	NA	-169	-5	intron_retention	FALSE	canonical	1	3	junction_9	23.1800260885844	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGACTTGGTGTTAGCA	-120923020	False	NA	-5	True	AATAAA	-15	NA	120923039	120691919	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816623_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
WTC11_00070542	chr4	-	7611	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	48	385	-5	-385	multi-exon	FALSE	canonical	2	5	junction_1	3.57071421427143	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGGTTCTGTAATTTT	-133148621	True	NA	NA	False	NA	NA	NA	133149099	133089054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
WTC11_00070543	chr4	-	5123	2	NNC	ENSG00000254535.4	novel	4985	2	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTGAAAATGATTTT	-134201364	True	NA	NA	False	AATAAA	-23	NA	134201872	134196332	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_134201246_134201662
WTC11_00070544	chr4	-	619	2	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-134681447	True	NA	NA	False	AATAAA	-16	NA	134683239	134677978	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_134678357_134682998
WTC11_00070547	chr4	-	3270	9	NIC	ENSG00000109381.21	novel	4012	10	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	41.5925173558899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGGTCTCTGGTGA	-139175083	True	NA	-14	True	AATATA	-17	NA	139177202	139057858	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
WTC11_00070548	chr4	-	1314	5	NNC	ENSG00000137463.5	novel	1224	4	NA	NA	-62	57207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1102739225359	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATGATGGTGCACCC	NA	False	NA	NA	False	NA	NA	NA	139280287	139208957	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_139208984_139266162_139267042_139268671_139268766_139275288_139275393_139280076
WTC11_00070549	chr4	-	1023	1	FSM	ENSG00000178458.5	ENST00000230495.2	411	1	-82	-530	-82	530	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACATACTTGTAGACT	NA	False	NA	NA	False	ATTAAA	-27	NA	139698636	139697613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139697600_139698600
WTC11_00070550	chr4	-	5134	4	ISM	ENSG00000196782.13	ENST00000509479.6	6844	5	263602	0	262387	0	3prime_fragment	FALSE	canonical	2	12	junction_3	2.35702260395516	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTATAGTTTATTTT	NA	False	NA	2	True	AATAAA	-17	NA	139890582	139716752	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_139720324_139725750_139725836_139730415_139730668_139889356
WTC11_00070551	chr4	-	540	1	FSM	ENSG00000249741.2	ENST00000502554.2	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTTAACATTATAAATAAT	-143912016	False	NA	NA	False	NA	NA	NA	143912053	143911513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_143911500_143912100
WTC11_00070552	chr4	-	466	5	FSM	ENSG00000164162.14	ENST00000506851.5	471	5	12	-7	-5	7	multi-exon	FALSE	canonical	0	0	junction_1	110.23242490302	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTACTGCTGCAGATG	-145094363	True	NA	NA	False	ACTAAA	-8	NA	145098201	144967104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144967161_145064571_145064693_145081659_145081751_145095984_145096112_145098130
WTC11_00070553	chr4	-	1167	6	NNC	ENSG00000164162.14	novel	928	6	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	105.323501650866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATTTGAAGCCAATCAT	-145094334	True	NA	-28	True	AATAAA	-26	NA	145098172	144995158	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_144995604_145033041_145033372_145064571_145064693_145081659_145081751_145095984_145096112_145098119
WTC11_00070554	chr4	-	215	1	FSM	ENSG00000249245.2	ENST00000513203.2	1877	1	1725	-63	1725	63	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGCCAAATCATTGTG	NA	False	NA	NA	False	NA	NA	NA	145624310	145624095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145624100_145624300
WTC11_00070555	chr4	-	7875	15	FSM	ENSG00000151612.18	ENST00000652097.1	4097	15	-630	-3148	-229	0	multi-exon	FALSE	canonical	1	1	junction_2	11.0686632491213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTCTTTTTCTTTT	-145938912	False	NA	NA	False	ATTAAA	-22	NA	145939052	145757626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761599_145763089_145763118_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
WTC11_00070557	chr4	-	1134	13	FSM	ENSG00000120519.16	ENST00000507030.5	1134	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.31507290636732	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGAGGTGGACTTTCTG	-146521372	False	NA	NA	False	NA	NA	NA	146521717	146256490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_146256521_146256825_146256937_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
WTC11_00070558	chr4	-	10063	57	NIC	ENSG00000198589.14	novel	10353	58	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_56	44.672090428648	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAATAAATTCTTTGT	-151015087	True	NA	-58	True	NA	NA	NA	151015724	150264688	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015472
WTC11_00070562	chr4	-	215	1	FSM	ENSG00000250350.1	ENST00000507181.1	163	1	-79	27	-79	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGACAACAGCACACTACA	NA	False	NA	NA	False	NA	NA	NA	151279271	151279056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151279100_151279300
WTC11_00070563	chr4	-	843	4	FSM	ENSG00000109670.16	ENST00000604872.6	921	4	0	78	0	-78	multi-exon	FALSE	canonical	3	18	junction_1	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCACAGTCTTTGTAT	-152535175	False	NA	NA	False	AATGAA	-3	NA	152535191	152411237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152411873_152412479_152412530_152534940_152535034_152535126
WTC11_00070564	chr4	-	2521	2	NNC	ENSG00000169989.3	novel	2438	2	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	-152779804	False	NA	NA	False	CATAAA	-18	NA	152779816	152769353	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_152771540_152779481
WTC11_00070571	chr4	-	789	2	FSM	ENSG00000171497.5	ENST00000507213.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTACTTTGTAGAGAAG	-158710803	False	NA	NA	False	NA	NA	NA	158710821	158709941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_158710671_158710761
WTC11_00070573	chr4	-	2464	4	NIC	ENSG00000164128.7	novel	536	5	NA	NA	12	0	intron_retention	FALSE	canonical	3	8	junction_2	38.5947607267561	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163331344	True	NA	-2	True	ATTAAA	-27	NA	163332584	163323961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_163325759_163325855_163325932_163326217_163326706_163332481
WTC11_00070577	chr4	-	2971	14	FSM	ENSG00000137601.18	ENST00000509912.5	2971	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.24262266529088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTAGGTTTTTTT	NA	False	NA	-3	True	AATAAA	-13	NA	169599143	169554042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169555852_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099
WTC11_00070580	chr4	-	1987	9	NIC	ENSG00000038002.9	novel	2037	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	19.1294929363013	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	-177441586	True	NA	-4	True	AATAAA	-22	NA	177442409	177430773	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_177431809_177433213_177433348_177434381_177434490_177436297_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
WTC11_00070584	chr4	-	3683	21	NIC	ENSG00000151726.15	novel	3712	21	NA	NA	238	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	9.24918915365017	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	-184805378	False	172	-3	True	AATAAA	-21	NA	184805550	184755594	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184805526
WTC11_00070586	chr4	-	7349	12	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	0	-1067	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.0353744352329	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCTTTTGTTGGAATA	-185774348	True	NA	-2	True	AATAAA	-21	NA	185775441	185639961	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
WTC11_00070590	chr4	-	2266	9	NNC	ENSG00000179046.9	novel	1998	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	77.46037293352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGGAGCCTGATTTAATA	-188107616	True	NA	-26	True	AATAAA	-13	NA	188109582	188091272	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_188091942_188092786_188093023_188097060_188097162_188097323_188097347_188099034_188099210_188101055_188101274_188104836_188104933_188105179_188105588_188109242
WTC11_00070594	chr4	+	3093	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCGGACTGTGGTCCAG	NA	False	NA	NA	False	NA	NA	NA	256383	259476	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_256400_259500
WTC11_00070595	chr4	+	272	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGCAGCAGCTGCCG	17000990	False	NA	NA	False	NA	NA	NA	17001031	17001303	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_17001000_17001300
WTC11_00070597	chr4	+	564	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGGTCTGAGAAGGCCA	24326309	False	NA	NA	False	NA	NA	NA	24326328	24326892	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24326300_24326900
WTC11_00070598	chr4	+	2034	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAGAGAGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-33	NA	52739048	52741082	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_52739000_52741100
WTC11_00070601	chr4	+	434	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGATGTGTAGAGAAGGG	NA	False	NA	NA	False	AGTAAA	-37	NA	79555083	79555517	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79555100_79555500
WTC11_00070602	chr4	+	557	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAGAACGCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	79556279	79556836	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79556300_79556800
WTC11_00070603	chr4	+	387	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTGGGGTCAAGTGG	92442897	False	NA	NA	False	NA	NA	NA	92442913	92443300	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92442900_92443300
WTC11_00070604	chr4	+	652	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAGATAGTAGGGAT	NA	False	NA	NA	False	NA	NA	NA	94084956	94085608	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94085000_94085600
WTC11_00070605	chr4	+	550	1	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCCCACAGTGTTTTAC	NA	False	NA	NA	False	NA	NA	NA	118554277	118554827	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118554300_118554800
WTC11_00070606	chr4	+	5915	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTGTTCCCCAAATCCC	145705635	False	NA	NA	False	NA	NA	NA	145705646	145711561	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145705600_145711600
WTC11_00070607	chr4	+	2783	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	145766094	145768877	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145766100_145768900
WTC11_00070615	chr5	+	2733	11	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38494	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	74.3521351408283	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	52832	True	NA	18	True	AATAAA	-29	NA	53673	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_53766_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00070616	chr5	+	2767	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-17	32856	-17	0	5prime_fragment	FALSE	canonical	3	192	junction_1	33.9493740737587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	86779	True	NA	18	True	AATAAA	-29	NA	92150	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00070617	chr5	+	12609	20	FSM	ENSG00000153404.15	ENST00000637938.2	12591	20	-17	-1	-17	1	multi-exon	FALSE	canonical	3	23	junction_13	96.2722651155093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTACTGTGTCCTTCGA	86779	True	NA	13	True	CATAAA	-17	NA	92150	189967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721_163549_169339_169593_171042_171133_171213_171445_172896_173068_173917_174099_181513_181676_182003
WTC11_00070619	chr5	+	1064	4	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-14215	-18	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	131.476233593756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTGAGAGATACTGGATC	154820	False	NA	0	True	AATAAA	-11	NA	154837	157092	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_154992_155344_155795_156070_156211_156772
WTC11_00070622	chr5	+	2712	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	-19	0	-2	0	multi-exon	FALSE	canonical	3	748	junction_11	54.0355136432872	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	200382	True	NA	NA	False	NA	NA	NA	218300	257082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
WTC11_00070623	chr5	+	5440	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	-5	-3368	-5	2968	multi-exon	FALSE	canonical	3	62	junction_11	228.47980399443	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTACCGTGTGAGCTCC	200379	True	NA	NA	False	NA	NA	NA	218297	260050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
WTC11_00070629	chr5	+	861	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	-26	-163	0	0	multi-exon	FALSE	canonical	3	70	junction_3	414.753742197303	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262903	True	NA	13	True	AATAAA	-13	NA	271620	314969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_314416
WTC11_00070630	chr5	+	3504	5	FSM	ENSG00000249915.9	ENST00000513582.5	3500	5	-4	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	341.798460353466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262903	True	NA	13	True	AATAAA	-13	NA	271620	314969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_306755_311292_311403_314416
WTC11_00070631	chr5	+	1110	6	FSM	ENSG00000249915.9	ENST00000264933.9	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	107.802782895434	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262928	True	NA	18	True	AATAAA	-18	NA	271645	314974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306761_311292_311403_314416
WTC11_00070632	chr5	+	1099	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	-11	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	313.918205907208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262928	True	NA	13	True	AATAAA	-13	NA	271645	314969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
WTC11_00070633	chr5	+	1192	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	-36	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	455.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	262903	True	NA	13	True	AATAAA	-14	NA	271620	276940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_276011
WTC11_00070635	chr5	+	3763	2	FSM	ENSG00000249915.9	ENST00000512466.1	3763	2	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGCCTTCAGCTTTTC	308152	False	NA	17	True	AATAAA	-17	NA	308196	314973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_311403_314416
WTC11_00070636	chr5	+	217	2	FSM	ENSG00000063438.20	ENST00000510910.1	569	2	352	0	352	0	multi-exon	FALSE	canonical	3	20	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCATCTGCCGTGTGCGC	NA	False	NA	NA	False	NA	NA	NA	422728	423927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_422859_423840
WTC11_00070637	chr5	+	2800	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	1	0	1	0	multi-exon	FALSE	canonical	3	114	junction_1	35.9753001686188	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	441250	True	NA	11	True	ATTAAA	-24	NA	443176	467290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
WTC11_00070638	chr5	+	5365	12	FSM	ENSG00000180104.16	ENST00000503889.2	5365	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.1649759402388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGACTGGTGACTGTCA	453332	False	NA	3	True	CATAAA	-16	NA	453396	471936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_465273_465717_465846_466726_468610_468869_468943_469789_469988_471098
WTC11_00070639	chr5	+	1682	10	NNC	ENSG00000180104.16	novel	2682	12	NA	NA	562	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	62.7711894281303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAGAAATGAAAACGCC	453944	False	NA	1	True	ATTAAA	-14	NA	453958	467280	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465288_465717_465846_466726
WTC11_00070642	chr5	+	924	5	NIC	ENSG00000225138.8	novel	632	5	NA	NA	48	-20	combination_of_known_junctions	FALSE	canonical	3	3	junction_3	12.2142335003061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGTGATTTCACCTTAA	477342	False	NA	-12	True	AATAAA	-2	NA	477369	480864	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_477466_477805_477850_479865_479998_480067_480217_480361
WTC11_00070643	chr5	+	3028	1	FSM	ENSG00000225138.8	ENST00000534918.1	2762	1	-273	7	-273	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATGGACAAACTCTT	477822	False	NA	1	True	AATAAA	-15	NA	477849	480877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_477800_480900
WTC11_00070644	chr5	+	950	2	FSM	ENSG00000225138.8	ENST00000668009.1	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAAGCTAACCGAGGC	479480	False	NA	NA	False	NA	NA	NA	479507	480602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_480217_480361
WTC11_00070645	chr5	+	2372	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	127	junction_9	18.0929647073338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	609824	True	NA	8	True	AATAAA	-21	NA	612333	653553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
WTC11_00070646	chr5	+	5518	12	NNC	ENSG00000112877.8	novel	2366	12	NA	NA	-3	84	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	43.9012791846614	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGGAATAATTAAGTT	609827	True	NA	92	True	NA	NA	NA	612336	653637	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_643670_644298_644426_647804_647917_652987
WTC11_00070647	chr5	+	646	1	FSM	ENSG00000271781.1	ENST00000607068.1	791	1	68	77	68	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAATACATCGGCCAC	NA	False	NA	-72	True	NA	NA	NA	675893	676539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_675900_676500
WTC11_00070648	chr5	+	1055	2	FSM	ENSG00000288930.1	ENST00000686940.1	1104	2	49	0	49	0	multi-exon	FALSE	canonical	3	36	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGGCTTCAGAGGCAGA	784519	True	NA	NA	False	AATAAA	-18	NA	784873	786286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_785055_785412
WTC11_00070650	chr5	+	2422	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	9	0	-9	multi-exon	FALSE	canonical	3	436	junction_7	35.4185293627816	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTAACTTTAAGCCTG	885323	True	NA	72	True	ACTAAA	-14	NA	892883	918111	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
WTC11_00070651	chr5	+	576	4	FSM	ENSG00000071539.14	ENST00000510412.5	571	4	0	-5	0	5	multi-exon	FALSE	canonical	3	17	junction_3	225.76241198806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATTTCATTTACACCA	914543	False	NA	NA	False	TATAAA	-34	NA	914558	919362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_914578_915903_915974_917007_917152_919019
WTC11_00070652	chr5	+	2100	11	FSM	ENSG00000145506.14	ENST00000274150.4	1940	11	-160	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	7.37631344236401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCTGGAGTGCGCAA	NA	False	NA	17	True	CATAAA	-20	NA	1008801	1038682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037519_1037699_1037804
WTC11_00070653	chr5	+	2182	10	FSM	ENSG00000145506.14	ENST00000296849.10	2182	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	4.0307460327149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGGGAGTGCAGACC	NA	False	NA	NA	False	NA	NA	NA	1008801	1038943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037804
WTC11_00070655	chr5	+	2828	1	Genic_Genomic	ENSG00000286388.1	novel	NA	NA	NA	NA	2806	44	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAAATCCTGTTACAAC	NA	False	NA	52	True	NA	NA	NA	1348002	1350830	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_1348000_1350800
WTC11_00070657	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_3	89.2785901919753	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1769120	True	NA	20	True	AATAAA	-22	NA	1801406	1816048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
WTC11_00070658	chr5	+	372	2	FSM	ENSG00000249116.2	ENST00000692531.1	511	2	135	4	61	-4	multi-exon	FALSE	canonical	3	26	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGTTTCTCGCTAGAAAT	1883286	True	NA	118	True	AAGAAA	-9	NA	1883449	1884754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1883547_1884479
WTC11_00070659	chr5	+	387	2	FSM	ENSG00000186493.14	ENST00000649739.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGAGGCCGAGCGC	2752004	True	NA	NA	False	NA	NA	NA	2752130	2755081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2755028
WTC11_00070660	chr5	+	825	3	FSM	ENSG00000186493.14	ENST00000397835.4	681	3	-134	-10	0	10	multi-exon	FALSE	canonical	2	15	junction_2	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGATCCTTTCTCATT	2752004	True	NA	17	True	AATAAA	-10	NA	2752130	2755386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2752621_2752755_2755028
WTC11_00070661	chr5	+	1459	3	FSM	ENSG00000186493.14	ENST00000515640.5	1441	3	-18	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCGACTCTTACTAC	2751772	True	NA	9	True	AATAAA	-22	NA	2752227	2754373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2752621_2752755_2753284
WTC11_00070662	chr5	+	2080	4	FSM	ENSG00000170549.4	ENST00000302006.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	9.17726659862414	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTCCCCGCTCCTGCTG	3594912	True	NA	6	True	AATAAA	-16	NA	3595831	3601403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_3596382_3599224_3600261_3600608_3600682_3600982
WTC11_00070663	chr5	+	5015	23	FSM	ENSG00000145536.15	ENST00000274181.7	4979	23	-36	0	-36	0	multi-exon	TRUE	canonical	3	19	junction_19	12.8548797693443	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAACTACCTCATGAT	5138492	True	NA	30	True	AATAAA	-20	NA	5140293	5320304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052_5242192_5262656_5262784_5303267_5303470_5303571_5303767_5306503_5306729_5318133_5318282_5319022
WTC11_00070665	chr5	+	6701	17	ISM	ENSG00000145536.15	ENST00000433402.2	3227	20	0	57577	0	7043	5prime_fragment	FALSE	canonical	3	25	junction_14	10.4700092526225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGACCTGTGTCTTAAAT	5140454	False	NA	5	True	AATAAA	-14	NA	5140467	5246230	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052
WTC11_00070666	chr5	+	7947	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	-17	0	-17	0	multi-exon	FALSE	canonical	2	100	junction_3	55.554916662993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	5413053	True	NA	18	True	AATAAA	-21	NA	5422659	5490220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
WTC11_00070667	chr5	+	1799	3	FSM	ENSG00000164151.12	ENST00000505464.1	1074	3	0	-725	0	725	multi-exon	FALSE	canonical	3	239	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTATCACAACTTTT	5413135	True	NA	NA	False	NA	NA	NA	5422741	5438561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5423000_5436417_5436477_5437079
WTC11_00070668	chr5	+	2292	2	FSM	ENSG00000215218.4	ENST00000399816.4	5895	2	0	3603	0	-3603	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCCTGTGAGTCATAA	NA	False	NA	NA	False	NA	NA	NA	6448858	6493120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6449248_6491217
WTC11_00070671	chr5	+	7048	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	-13	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	10.8282039138539	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	6630084	True	NA	35	True	ATTAAA	-30	NA	6633426	6674386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
WTC11_00070672	chr5	+	5030	13	FSM	ENSG00000112941.14	ENST00000230859.8	5030	13	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	15.162774225788	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTGTGTCCAAG	6711912	True	NA	13	True	AATAAA	-13	NA	6713431	6757044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6714700_6737509_6737634_6738682_6738730_6739731_6739853_6742489_6742598_6743711_6743841_6746213_6746428_6748463_6748591_6749556_6749658_6750330_6750504_6751038_6751198_6752872_6753038_6754750
WTC11_00070675	chr5	+	4788	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCCCTGTAGCCTTTCTG	7262351	False	NA	NA	False	NA	NA	NA	7262373	7267161	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_7262400_7267200
WTC11_00070676	chr5	+	1367	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7267907	False	NA	27	True	ATTAAA	-21	NA	7267928	7269295	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_7267900_7269300
WTC11_00070677	chr5	+	2315	2	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-1296	-3022	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	7271457	False	NA	7	True	AATAAA	-19	NA	7271495	7273901	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7271629_7271719
WTC11_00070678	chr5	+	489	3	ISM	ENSG00000251250.3	ENST00000650000.1	860	4	-23	30110	-23	148	5prime_fragment	FALSE	canonical	3	24	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAAAACTTGCCATTTTAA	7289677	True	NA	NA	False	ATTAAA	-33	NA	7289867	7296493	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_7289975_7290791_7290895_7296214
WTC11_00070679	chr5	+	2425	19	NNC	ENSG00000078295.17	novel	6645	25	NA	NA	329	-42162	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	190.927794832251	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGTTTGTCTTTGCAAT	7396431	False	NA	NA	False	ATTAAA	-17	NA	7396466	7774712	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7774501
WTC11_00070680	chr5	+	5097	25	FSM	ENSG00000078295.17	ENST00000338316.9	6645	25	-1001	2549	-1001	0	multi-exon	FALSE	canonical	3	332	junction_19	185.208141169754	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7395125	False	NA	17	True	ATTAAA	-18	NA	7395136	7827532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
WTC11_00070681	chr5	+	3755	25	NNC	ENSG00000078295.17	novel	6645	25	NA	NA	329	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	243.785164842371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7396431	False	NA	17	True	ATTAAA	-18	NA	7396466	7827532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7396507_7414572_7414776_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789658_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
WTC11_00070684	chr5	+	9915	5	FSM	ENSG00000078295.17	ENST00000489501.1	9908	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	370	junction_1	30.2241625194148	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7793594	False	NA	17	True	ATTAAA	-18	NA	7793611	7827532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
WTC11_00070685	chr5	+	574	3	FSM	ENSG00000124275.15	ENST00000507837.5	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAACTTCCATCATTCC	7851052	False	NA	NA	False	AAGAAA	-34	NA	7851185	7862018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7851586_7856786_7856893_7861950
WTC11_00070687	chr5	+	3257	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	-12	0	-12	0	multi-exon	FALSE	canonical	3	101	junction_3	50.6071806633592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865068	True	NA	16	True	AATAAA	-19	NA	7869135	7901113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
WTC11_00070688	chr5	+	3077	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	-12	11	-12	0	multi-exon	FALSE	canonical	3	28	junction_1	59.8215294406235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865068	True	NA	16	True	AATAAA	-19	NA	7869135	7901113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
WTC11_00070689	chr5	+	3242	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	32	0	-12	0	multi-exon	FALSE	canonical	3	28	junction_1	64.9036963193805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865068	True	NA	27	True	AATAAA	-30	NA	7869135	7901124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
WTC11_00070691	chr5	+	3091	13	FSM	ENSG00000124275.15	ENST00000510525.5	3091	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	70.2807860577049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAACTTGGTAAGTTT	7870743	True	NA	19	True	AATAAA	-22	NA	7870769	7901116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
WTC11_00070696	chr5	+	3677	2	FSM	ENSG00000247516.8	ENST00000664641.1	3366	2	-311	0	-130	0	multi-exon	FALSE	canonical	3	188	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTCTTCCTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	8457249	8463092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_8457767_8459932
WTC11_00070698	chr5	+	1458	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	34	427	34	-2	multi-exon	FALSE	canonical	3	40	junction_2	28	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTGCCTTGTCCTCTT	9545144	True	NA	15	True	ATTAAA	-20	NA	9546229	9550298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_9546531_9548989_9549150_9549301
WTC11_00070699	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	1323.84650932308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	10190687	True	NA	31	True	AATAAA	-21	NA	10250215	10264925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
WTC11_00070700	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	4165	junction_6	242.619063554371	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	10190751	True	NA	15	True	AATAAA	-15	NA	10250279	10266389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
WTC11_00070705	chr5	+	4746	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	-12	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.6407040862398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	10351652	True	NA	4	True	NA	NA	NA	10353702	10434285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
WTC11_00070706	chr5	+	9658	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	-23	6	-23	-6	multi-exon	TRUE	canonical	3	115	junction_1	29.1516311722003	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCAGATTGTTTGACAAG	NA	False	NA	NA	False	AATAAA	-11	NA	10353671	10440382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
WTC11_00070707	chr5	+	502	2	FSM	ENSG00000145495.16	ENST00000514312.1	253	2	0	-249	0	249	multi-exon	FALSE	canonical	3	157	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGAGCCTCTGTCCAAA	10415546	True	NA	NA	False	NA	NA	NA	10415598	10417700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10415670_10417269
WTC11_00070708	chr5	+	855	6	FSM	ENSG00000145491.12	ENST00000503804.5	1291	6	417	19	-13	-19	multi-exon	FALSE	canonical	1	1	junction_1	1.35646599662505	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACTTACCCTGAATCAC	10441889	True	NA	NA	False	AATACA	-43	NA	10441940	10465005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10442004_10442126_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
WTC11_00070709	chr5	+	9586	4	FSM	ENSG00000164236.12	ENST00000296657.7	9586	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATGGTACAAATGTGT	10564053	True	NA	9	True	AATAAA	-21	NA	10564069	10657816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10564834_10618332_10618463_10638027_10638169_10649265
WTC11_00070710	chr5	+	11311	1	Genic_Genomic	ENSG00000248131.6	novel	NA	NA	NA	NA	533	5116	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAACAAGCACAGACCAG	NA	False	NA	NA	False	AAAACA	-35	NA	12649496	12660807	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_12649500_12660800
WTC11_00070711	chr5	+	736	5	FSM	ENSG00000038382.21	ENST00000502816.1	736	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	1.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACATCCTAGCTAAGAAG	14143691	False	NA	NA	False	NA	NA	NA	14143701	14290887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715
WTC11_00070712	chr5	+	5250	29	NIC	ENSG00000038382.21	novel	7455	43	NA	NA	4030	879	combination_of_known_junctions	FALSE	canonical	2	2	junction_28	5.89999567623501	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTAACATGGAAACGGA	14297058	False	NA	NA	False	NA	NA	NA	14297070	14421679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879_14399071_14400962_14401065_14405847_14405991_14406572_14406673_14419777_14420022_14420457
WTC11_00070713	chr5	+	801	5	FSM	ENSG00000038382.21	ENST00000509354.1	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.78535710713571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAAATGAGGATTTCA	14399013	False	NA	NA	False	NA	NA	NA	14399023	14420186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14399071_14400962_14401065_14405847_14405991_14406572_14406673_14419777
WTC11_00070714	chr5	+	2359	3	FSM	ENSG00000038382.21	ENST00000510281.1	861	3	-167	-1331	-167	-45	multi-exon	FALSE	canonical	2	7	junction_2	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATACATTTCTCTAA	14482237	False	NA	NA	False	TATAAA	-2	NA	14482249	14489120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14482774_14485068_14485247_14487463
WTC11_00070716	chr5	+	7047	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	68	junction_2	8.83869045614744	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	14581077	True	NA	NA	False	AATAAA	-28	NA	14581784	14616180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
WTC11_00070719	chr5	+	8070	7	FSM	ENSG00000154124.5	ENST00000284274.5	7969	7	-54	-47	0	47	multi-exon	FALSE	canonical	3	48	junction_1	8.31497978884428	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTAGTTGCCTGTGTG	14661759	True	NA	NA	False	ATTAAA	-2	NA	14664663	14699897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14664978_14673641_14673719_14678680_14678776_14681463_14681608_14687520_14687647_14690038_14690309_14692853
WTC11_00070720	chr5	+	4658	4	FSM	ENSG00000183580.10	ENST00000504595.2	4580	4	-78	0	-78	0	multi-exon	FALSE	canonical	3	21	junction_3	6.94422221866655	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGCTTCATTTTT	15498468	True	NA	6	True	AATAAA	-16	NA	15500101	15939793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_15500714_15615982_15616073_15927889_15928502_15936449
WTC11_00070721	chr5	+	1807	2	FSM	ENSG00000176788.9	ENST00000322611.4	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAAAGACTATTGGGTT	17201466	True	NA	5	True	AATAAA	-20	NA	17217630	17276834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_17217811_17275207
WTC11_00070722	chr5	+	1696	1	FSM	ENSG00000283740.1	ENST00000510838.2	1201	1	34	-529	34	529	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTTTTTCTCTAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	17604210	17605906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_17604200_17605900
WTC11_00070723	chr5	+	386	1	FSM	ENSG00000240785.2	ENST00000490372.1	323	1	-24	-39	-24	39	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAGCCATAGAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	18049525	18049911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_18049500_18049900
WTC11_00070725	chr5	+	1354	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	11	279	11	0	multi-exon	FALSE	canonical	3	17	junction_3	9.56846672960488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTATTTTTATTTATG	21458262	True	NA	NA	False	AATAAA	-21	NA	21459462	21474438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
WTC11_00070727	chr5	+	1992	1	FSM	ENSG00000213430.6	ENST00000503199.1	1726	1	10	-276	10	276	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTCAACCTAAATCACT	21882574	False	NA	NA	False	NA	NA	NA	21882594	21884586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21882600_21884600
WTC11_00070728	chr5	+	249	1	FSM	ENSG00000226432.3	ENST00000514047.1	877	1	45	583	45	-583	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATCGCTCTGCATTAA	NA	False	NA	NA	False	NA	NA	NA	24170414	24170663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_24170400_24170700
WTC11_00070729	chr5	+	367	1	FSM	ENSG00000251593.1	ENST00000511640.1	1732	1	-188	1553	-188	-1553	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAATTAAGAAGGTGACT	NA	False	NA	NA	False	NA	NA	NA	25909314	25909681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_25909300_25909700
WTC11_00070730	chr5	+	1332	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	-7	0	2	0	multi-exon	FALSE	canonical	3	51	junction_2	33.7276675083759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	27467024	True	NA	NA	False	AATAAA	-28	NA	27472272	27485686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
WTC11_00070731	chr5	+	1629	3	FSM	ENSG00000250337.8	ENST00000512067.5	1610	3	-19	0	2	0	multi-exon	FALSE	canonical	3	26	junction_2	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTGAAATAACTTA	27467024	True	NA	NA	False	ATTAAA	-9	NA	27472272	27486146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27484925
WTC11_00070733	chr5	+	968	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	3	0	2	0	multi-exon	FALSE	canonical	3	10	junction_3	50.3940031705714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467024	True	NA	14	True	AATAAA	-26	NA	27472272	27496404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
WTC11_00070735	chr5	+	4527	5	ISM	ENSG00000250337.8	ENST00000664566.1	1274	7	17	7548	4	2701	5prime_fragment	FALSE	canonical	3	21	junction_2	41.6563320516821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTTTCAACATCTT	27467062	True	NA	3	True	AATAAA	-16	NA	27472310	27488847	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27484925
WTC11_00070737	chr5	+	2566	11	FSM	ENSG00000113361.13	ENST00000514738.5	2569	11	3	0	3	0	multi-exon	FALSE	canonical	1	7	junction_7	2.87054001888146	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATGATGACTTTTCTC	31193513	True	NA	NA	False	TATAAA	-36	NA	31193752	31318346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672
WTC11_00070738	chr5	+	4048	12	FSM	ENSG00000113361.13	ENST00000265071.3	8540	12	67	4425	3	-4425	multi-exon	FALSE	canonical	1	7	junction_7	3.01511344577764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATGCAATTAGCCTCA	31193513	True	NA	NA	False	NA	NA	NA	31193752	31324721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672_31317925_31322817
WTC11_00070739	chr5	+	239	1	FSM	ENSG00000206682.1	ENST00000383955.1	105	1	-229	95	-229	-95	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAATGGATTTTACAAG	NA	False	NA	NA	False	AATATA	-11	NA	31505454	31505693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31505500_31505700
WTC11_00070744	chr5	+	3590	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	-18	0	-4	0	multi-exon	FALSE	canonical	3	268	junction_2	29.3342802877453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	31528384	True	NA	19	True	ATTAAA	-30	NA	31532282	31555053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
WTC11_00070747	chr5	+	12001	25	FSM	ENSG00000133401.16	ENST00000438447.2	11984	25	-20	3	-20	3	multi-exon	TRUE	canonical	0	0	junction_1	5.67508565769912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTCTCTTTT	31638401	True	NA	5	True	AATAAA	-17	NA	31639110	32110929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31639438_31798888_31799725_31983154_31983657_31995575_31995719_32000138_32000272_32010329_32010483_32037230_32037343_32048538_32048685_32052610_32052731_32053768_32053884_32057654_32057729_32057877_32058104_32059238_32059357_32061001_32061135_32069568_32069651_32071383_32071419_32072160_32072318_32073831_32074644_32077461_32077607_32087130_32091176_32092906_32093025_32097278_32097381_32098363_32098635_32101104_32101240_32107968
WTC11_00070748	chr5	+	513	3	NNC	ENSG00000133401.16	novel	11984	25	NA	NA	-1	-152762	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_2	21	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTGTGTTGGCCAA	31638420	True	NA	12	True	AATAAA	-22	NA	31639129	31646527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_31639438_31646140_31646256_31646437
WTC11_00070750	chr5	+	384	1	FSM	ENSG00000249774.1	ENST00000506046.1	166	1	0	-218	0	218	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTTGCAGTAAGTCACA	31923351	False	NA	NA	False	AATAAA	-35	NA	31923366	31923750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31923400_31923800
WTC11_00070751	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	32174379	False	NA	8	True	AATAAA	-20	NA	32174470	32175272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32174500_32175300
WTC11_00070752	chr5	+	508	1	FSM	ENSG00000249142.1	ENST00000503901.1	1108	1	119	481	119	-481	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGAGCCATTTGCTG	NA	False	NA	NA	False	NA	NA	NA	32522876	32523384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32522900_32523400
WTC11_00070753	chr5	+	785	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	-14	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1966.17069452273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	32555594	True	NA	-37	True	ATTAAA	-42	NA	32585556	32601282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
WTC11_00070754	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3694	junction_4	227.03468897946	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	32555594	True	NA	13	True	AATAAA	-14	NA	32585556	32604079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
WTC11_00070759	chr5	+	708	1	FSM	ENSG00000240376.1	ENST00000467270.1	629	1	-27	-52	-27	52	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCCCCAAAAAAAAGATT	33162102	True	NA	28	True	AATAAA	-22	NA	33162151	33162859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33162200_33162900
WTC11_00070760	chr5	+	5863	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	-1842	-1349	-1573	1344	multi-exon	FALSE	canonical	3	1347	junction_9	156.852450914943	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGGAGAACCCTGACT	NA	False	NA	NA	False	ACTAAA	-34	NA	33439122	33469435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
WTC11_00070763	chr5	+	2703	20	NNC	ENSG00000113407.14	novel	2672	19	NA	NA	0	17619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	385.973274231588	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAACAACAAAACAGGA	33421484	True	NA	NA	False	NA	NA	NA	33440963	33485710	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559_33468084_33485677
WTC11_00070766	chr5	+	633	5	FSM	ENSG00000113407.14	ENST00000504698.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_3	260.707211254311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCATTTAAACGCAACA	33456015	True	NA	3	True	ATTAAA	-19	NA	33456033	33459969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694
WTC11_00070768	chr5	+	760	2	FSM	ENSG00000113407.14	ENST00000503422.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTGCTCTGTCC	33466696	False	NA	18	True	AATAAA	-21	NA	33466757	33468091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33466986_33467559
WTC11_00070769	chr5	+	3598	1	FSM	ENSG00000215156.5	ENST00000505001.2	3598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTGAAAAACTCTATTT	NA	False	NA	NA	False	NA	NA	NA	34190055	34193653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34190100_34193700
WTC11_00070770	chr5	+	831	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	-551	270	-468	0	multi-exon	FALSE	canonical	3	656	junction_1	48	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTGAAACACTGGTTT	34655838	False	NA	NA	False	NA	NA	NA	34655859	34757598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467
WTC11_00070771	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_10	95.3680541058935	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	34645933	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
WTC11_00070772	chr5	+	818	7	FSM	ENSG00000039560.14	ENST00000510319.5	557	7	-261	0	-188	0	multi-exon	FALSE	canonical	3	30	junction_3	266.669427069046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAAGAGCCCCATAAAC	34656118	False	NA	NA	False	NA	NA	NA	34656139	34808622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467_34757615_34795938_34796028_34803711_34803777_34807799_34807858_34808583
WTC11_00070773	chr5	+	4913	18	NIC	ENSG00000039560.14	novel	4986	18	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	189.629049648487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTGTTGATTTTT	34646020	False	NA	15	True	AATAAA	-15	NA	34656414	34832610	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_34656476_34686871_34686956_34757467_34757615_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
WTC11_00070774	chr5	+	4825	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	-38	-1846	0	0	multi-exon	FALSE	canonical	3	119	junction_10	172.062477297492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTGTTGATTTTTG	34646006	True	NA	16	True	AATAAA	-16	NA	34656400	34832611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
WTC11_00070775	chr5	+	5064	18	FSM	ENSG00000039560.14	ENST00000428746.6	5064	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	193.411764705882	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTGTTGATTTTTG	34656385	False	NA	16	True	AATAAA	-16	NA	34656469	34832611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656697_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
WTC11_00070776	chr5	+	1161	6	FSM	ENSG00000113460.13	ENST00000510960.5	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	1452	junction_5	85.485905270986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTCCACCTCCCGGGTT	34907498	True	NA	NA	False	NA	NA	NA	34915676	34923357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694
WTC11_00070778	chr5	+	1592	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	-1	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_9	82.9584158806814	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	34907531	True	NA	NA	False	ATTAAA	-28	NA	34915709	34925996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
WTC11_00070780	chr5	+	6112	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	-10	5	-10	-5	multi-exon	FALSE	canonical	3	244	junction_9	37.7812319492537	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATACCTGCTTCTGCAG	34926621	True	NA	3	True	AATAAA	-13	NA	34929548	34958959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
WTC11_00070781	chr5	+	3246	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	-135	3097	-101	0	multi-exon	FALSE	canonical	3	89	junction_10	84.9866002509938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGAAACCCCGTCTCTA	34929437	False	NA	NA	False	NA	NA	NA	34929457	34955867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
WTC11_00070782	chr5	+	2788	12	FSM	ENSG00000168724.17	ENST00000642851.1	2788	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	91.4910463938845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGAAACCCCGTCTCTA	34929776	False	NA	NA	False	NA	NA	NA	34929819	34955867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34950169_34950343_34953925_34954002_34954552
WTC11_00070785	chr5	+	2276	13	FSM	ENSG00000168724.17	ENST00000642285.1	2276	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	130.11925619728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAACACACAGAAGTGC	34930019	False	NA	-7	True	NA	NA	NA	34930062	34955018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
WTC11_00070787	chr5	+	366	3	FSM	ENSG00000152582.14	ENST00000502454.1	462	3	95	1	95	-1	multi-exon	FALSE	canonical	1	2	junction_2	0.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGCAAAGGGAGAAAAGA	NA	False	NA	NA	False	ATTAAA	-38	NA	35646625	35654658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_35646808_35649360_35649426_35654539
WTC11_00070789	chr5	+	3318	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	-24	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	184.77418650883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	36145803	True	NA	-8	True	TTTAAA	-3	NA	36152082	36184006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
WTC11_00070790	chr5	+	3300	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	-1	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	195.372560765323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	36145803	True	NA	-3	True	TTTAAA	-8	NA	36152082	36184011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
WTC11_00070791	chr5	+	1509	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	28	0	28	0	multi-exon	FALSE	canonical	3	242	junction_9	105.806952092531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	36152006	False	NA	27	True	AATAAA	-30	NA	36152016	36184041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
WTC11_00070794	chr5	+	3511	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	-94	298	28	0	multi-exon	FALSE	canonical	3	285	junction_9	93.3537014812317	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAATGAGTGCTTAAA	36152006	False	NA	7	True	AATAAA	-10	NA	36152016	36184021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
WTC11_00070797	chr5	+	3519	3	FSM	ENSG00000079215.15	ENST00000504121.5	583	3	-56	-2880	24	-1330	multi-exon	FALSE	canonical	3	24	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGACAAAAGCTCATGTAA	36603393	True	NA	NA	False	NA	NA	NA	36606554	36611578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36607223_36607312_36608328
WTC11_00070798	chr5	+	3277	3	FSM	ENSG00000079215.15	ENST00000506725.1	1137	3	-62	-2078	24	454	multi-exon	TRUE	canonical	3	10	junction_2	93.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGTGAGGACACACTT	36603393	True	NA	NA	False	NA	NA	NA	36606554	36615565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328_36608605_36612745
WTC11_00070800	chr5	+	3957	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	-51	13	24	0	multi-exon	FALSE	canonical	3	107	junction_3	25.5429920808907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTACATTAACATCTTT	36603393	True	NA	3	True	AATAAA	-10	NA	36606554	36688321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
WTC11_00070801	chr5	+	4194	11	FSM	ENSG00000079215.15	ENST00000680232.1	4194	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	66.2057399324258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	36606150	False	NA	9	True	AATAAA	-16	NA	36606464	36688327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679349_36679491_36679626_36679861_36680394_36680590_36683863_36683999_36686064
WTC11_00070803	chr5	+	3430	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	-132	-2202	14	-1407	multi-exon	FALSE	canonical	3	197	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGAACCATTTGTACAA	36606164	False	NA	NA	False	TATAAA	-32	NA	36606478	36611501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328
WTC11_00070808	chr5	+	3925	10	FSM	ENSG00000079215.15	ENST00000679983.1	4466	10	541	0	-158	0	multi-exon	FALSE	canonical	3	30	junction_1	43.9868105933226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTGCACGTTGTT	36604011	False	NA	13	True	AATAAA	-20	NA	36607172	36688331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36607312_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
WTC11_00070809	chr5	+	6683	7	FSM	ENSG00000079215.15	ENST00000624112.2	6683	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	15.369522511198	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATCTTTGCACGTTGT	NA	False	NA	12	True	AATAAA	-19	NA	36667716	36688330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
WTC11_00070811	chr5	+	9249	46	FSM	ENSG00000164190.19	ENST00000652901.1	9228	46	-21	0	-21	0	multi-exon	FALSE	canonical	1	1	junction_42	27.6123965719103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGATTTTGATGTATT	36876763	False	NA	-88	True	AAAAAG	-42	NA	36876819	37065394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37058890_37059166_37060843_37061019_37063789_37064020_37064526
WTC11_00070813	chr5	+	9537	47	NIC	ENSG00000164190.19	novel	10425	47	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	28.7679014703793	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCTGTTTCCATTTG	36876730	False	NA	20	True	AATAAA	-20	NA	36876786	37065502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789_37064020_37064526
WTC11_00070817	chr5	+	255	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	-14	124	0	-124	multi-exon	FALSE	canonical	3	193	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGCTCAGATATTTG	37374812	True	NA	22	True	AAAACA	-5	NA	37379287	37381685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37379393_37379488_37379555_37381601
WTC11_00070818	chr5	+	2132	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	-20	765	-4	0	multi-exon	FALSE	canonical	3	173	junction_3	24.126827521006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGTTTTGTCCTTTGCA	37374822	True	NA	25	True	ATTAAA	-15	NA	37379297	37752670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
WTC11_00070819	chr5	+	759	4	FSM	ENSG00000082068.9	ENST00000507136.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_3	5.71547606649408	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTCCTTTGCATT	NA	False	NA	27	True	ATTAAA	-17	NA	37722642	37752672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37722935_37724933_37725051_37726882_37727046_37752485
WTC11_00070822	chr5	+	1152	6	FSM	ENSG00000164318.18	ENST00000397210.7	1299	6	147	0	91	0	multi-exon	FALSE	canonical	1	2	junction_1	1.16619037896906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATCATAATGCGGCCC	NA	False	NA	NA	False	AATAAA	-25	NA	38445686	38464556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_38445703_38448300_38448380_38451314_38451459_38458310_38458395_38462907_38463012_38463831
WTC11_00070824	chr5	+	5267	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	164	junction_5	15.8316139417306	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	41900138	True	NA	4	True	AATAAA	-15	NA	41904322	41921636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
WTC11_00070828	chr5	+	3216	8	NIC	ENSG00000172262.12	novel	2599	8	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	28	junction_1	48.75888197476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTCATGACTCTTTT	43120864	False	NA	17	True	AGTAAA	-10	NA	43120877	43176318	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
WTC11_00070830	chr5	+	3356	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	-16	0	-14	0	multi-exon	FALSE	canonical	3	92	junction_4	29.4604254325471	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	43119687	True	NA	16	True	AATAAA	-17	NA	43121581	43176247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
WTC11_00070831	chr5	+	3231	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	-23	1	-23	1	multi-exon	FALSE	canonical	3	49	junction_1	42.8652373308322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGACTCTTTTTTAAA	43119678	True	NA	22	True	AGTAAA	-15	NA	43121572	43176323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
WTC11_00070834	chr5	+	3990	22	NIC	ENSG00000112992.18	novel	6483	22	NA	NA	1	65	combination_of_known_junctions	TRUE	canonical	2	8	junction_1	29.6196600763505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGATGCTGGAAACAAA	43601901	True	NA	NA	False	ATTAAA	-16	NA	43602692	43705019	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43602754_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
WTC11_00070836	chr5	+	6501	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	-18	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	25.9054621754089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	43601913	True	NA	NA	False	AATAAA	-29	NA	43602704	43707405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
WTC11_00070839	chr5	+	6437	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	-16	0	1	0	multi-exon	FALSE	canonical	3	81	junction_1	19.0224834152496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	43603106	False	NA	NA	False	AATAAA	-20	NA	43603163	43707396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
WTC11_00070841	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_3	34.662660024874	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	44800267	True	NA	12	True	AATAAA	-17	NA	44808946	44815514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
WTC11_00070842	chr5	+	7590	1	FSM	ENSG00000272335.1	ENST00000607056.1	2517	1	-5075	2	-5075	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGCTGTGTGTGTGTA	44820990	False	NA	16	True	AATAAA	-23	NA	44821000	44828590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_44821000_44828600
WTC11_00070843	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	20.238418910577	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	50666623	False	NA	NA	False	AATAAA	-19	NA	50666636	50846519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
WTC11_00070844	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	22.1602888067823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	50667470	False	NA	-22	True	NA	NA	NA	50667556	50843374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
WTC11_00070850	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109739	True	NA	NA	False	AATAAA	-22	NA	53109898	53115126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53110149_53112239
WTC11_00070853	chr5	+	676	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	-8	1	-2	-1	multi-exon	FALSE	canonical	3	1093	junction_4	71.0967650459569	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACATTTTGTGGTGTCT	53552209	True	NA	24	True	AATAAA	-42	NA	53560630	53683337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
WTC11_00070854	chr5	+	1325	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	-147	-345	-133	345	multi-exon	FALSE	canonical	3	42	junction_2	560.428407559788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTATAATTTACGAAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	53560499	53683683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
WTC11_00070855	chr5	+	5223	2	FSM	ENSG00000178996.14	ENST00000381410.5	5223	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAATGGAATATAATTA	54515422	True	NA	NA	False	AATAAA	-20	NA	54517758	54546586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_54519574_54543178
WTC11_00070856	chr5	+	1039	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	-3	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	91	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	55156510	True	NA	34	True	AATAAA	-45	NA	55160166	55164754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160244_55160993_55161256_55164054
WTC11_00070857	chr5	+	3421	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	1	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	70.153799295231	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156512	True	NA	NA	False	AAAAAG	-22	NA	55160168	55167071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
WTC11_00070859	chr5	+	354	2	FSM	ENSG00000164294.14	ENST00000505096.1	426	2	0	72	0	-72	multi-exon	FALSE	canonical	3	54	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGGAAAATACTTATA	55156538	True	NA	NA	False	TTTAAA	-35	NA	55160194	55160634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160244_55160329
WTC11_00070861	chr5	+	597	1	FSM	ENSG00000279883.1	ENST00000624823.1	684	1	-55	142	-55	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGTGACACATCTTGA	NA	False	NA	NA	False	NA	NA	NA	55484347	55484944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55484300_55484900
WTC11_00070862	chr5	+	449	1	FSM	ENSG00000264281.3	ENST00000582508.1	78	1	-43	-328	-43	328	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTTCTCTCCTATAGA	55944519	True	NA	31	True	ATTAAA	-24	NA	55944612	55945061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55944600_55945100
WTC11_00070863	chr5	+	7036	20	FSM	ENSG00000095015.6	ENST00000399503.4	7036	20	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	12.1978155257861	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACTTTTATTTATT	56813723	True	NA	76	True	AATAAA	-15	NA	56815548	56896152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_56816056_56856599_56856751_56859714_56859916_56864733_56864935_56865339_56865457_56865828_56865978_56871909_56872032_56872640_56872723_56872824_56873006_56875031_56875311_56878979_56879102_56880710_56880803_56881082_56881273_56881569_56882867_56883526_56883680_56884663_56884827_56885931_56886064_56887377_56887521_56888225_56888358_56893530
WTC11_00070865	chr5	+	1652	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	-331	-312	24	312	multi-exon	TRUE	canonical	1	2	junction_1	20.7062792408487	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTGCCAGCAGAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	56909283	56917660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
WTC11_00070868	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	229	junction_7	275.202185775396	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	57173801	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070869	chr5	+	3731	14	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	1	98	junction_4	333.057434142926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	NA	False	NA	21	True	AATAAA	-17	NA	57173828	57263587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070871	chr5	+	2848	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57171466	True	NA	20	True	AATAAA	-23	NA	57173843	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070872	chr5	+	2689	11	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	1	61	junction_2	314.801588306031	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57171505	False	NA	20	True	AATAAA	-23	NA	57173882	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57173927_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070873	chr5	+	3009	15	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_3	375.824019825172	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57171508	False	NA	20	True	AATAAA	-23	NA	57173885	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57173927_57175447_57176401_57183796_57183919_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070874	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	299.252000828733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57173902	False	NA	21	True	AATAAA	-17	NA	57174048	57263587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070875	chr5	+	4516	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	-10	0	0	0	multi-exon	FALSE	canonical	1	328	junction_10	212.2543305246	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	57173902	False	NA	9	True	TATAAA	-15	NA	57174048	57264673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070876	chr5	+	2984	13	NNC	ENSG00000062194.16	novel	4683	13	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_3	331.793568687252	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57166291	False	NA	20	True	AATAAA	-23	NA	57174114	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57174212_57175447_57176401_57183796_57183919_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070877	chr5	+	2243	12	FSM	ENSG00000062194.16	ENST00000511209.5	2243	12	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_8	350.73087796818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57175909	False	NA	20	True	AATAAA	-23	NA	57175945	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249453_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00070884	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	18.411952639522	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	58582376	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
WTC11_00070891	chr5	+	8480	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	-5941	0	592	multi-exon	FALSE	canonical	3	362	junction_5	35.7945042904092	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTCTGTTCTAATTAAA	62305964	False	NA	NA	False	AATAAA	-17	NA	62306161	62391617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
WTC11_00070893	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	81.8851638296075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62302366	True	NA	8	True	AATAAA	-19	NA	62306451	62391025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
WTC11_00070896	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	26.7330574658873	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	62404123	True	NA	13	True	ATTAAA	-19	NA	62412762	62628582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
WTC11_00070900	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	31	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	64688960	True	NA	119	True	ATTAAA	-16	NA	64690502	64718190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64690815_64695506_64695665_64717888
WTC11_00070904	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	54.634666152198	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	64763152	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
WTC11_00070906	chr5	+	451	1	Genic_Genomic	ENSG00000153015.17	novel	NA	NA	NA	NA	50104	18	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAATTCCCAAAACAAA	NA	False	NA	NA	False	AGTAAA	-35	NA	65020557	65021008	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_65020600_65021000
WTC11_00070907	chr5	+	2149	12	FSM	ENSG00000113593.12	ENST00000535264.5	2195	12	46	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_1	159.183920862495	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTACCTTTGACTTTT	65558223	True	NA	18	True	ATTAAA	-12	NA	65563284	65587541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
WTC11_00070919	chr5	+	1513	11	ISM	ENSG00000113597.18	ENST00000231526.8	2715	12	16	1305	11	0	intron_retention	FALSE	canonical	3	104	junction_7	22.000909072127	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	65623855	True	NA	6	True	ATTAAA	-16	NA	65625055	65664764	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236
WTC11_00070926	chr5	+	8354	12	FSM	ENSG00000123213.23	ENST00000502464.5	8354	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	254.50071035313	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	65708551	True	NA	NA	False	AATAAA	-20	NA	65722242	65829283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65722415_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
WTC11_00070927	chr5	+	771	1	FSM	ENSG00000251648.2	ENST00000511047.2	682	1	-99	10	-99	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTAGGGAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	65732873	65733644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65732900_65733600
WTC11_00070930	chr5	+	7728	26	FSM	ENSG00000112851.15	ENST00000284037.10	8544	26	-832	1648	-813	-125	multi-exon	FALSE	canonical	3	12	junction_22	34.4741990479837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTATAGCCAAGTTTTC	65923571	True	NA	NA	False	CATAAA	-27	NA	65925742	66080898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66072168_66072292_66075023_66075231_66076315_66076409_66076874_66076950_66078422
WTC11_00070945	chr5	+	6999	16	FSM	ENSG00000145675.15	ENST00000521381.6	6975	16	-24	0	-24	0	multi-exon	TRUE	canonical	3	16	junction_1	13.0673469210684	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGTTGAAATTTCAC	68214932	True	NA	10	True	AATAAA	-19	NA	68215731	68301821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_68215950_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
WTC11_00070948	chr5	+	1317	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	50.6907837338855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	69089534	True	NA	13	True	AATAAA	-16	NA	69093990	69104740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
WTC11_00070949	chr5	+	4015	16	FSM	ENSG00000145740.20	ENST00000396591.8	3992	16	-23	0	0	0	multi-exon	FALSE	canonical	3	152	junction_12	26.9240908233995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATATTGATGTTTT	69089534	True	NA	NA	False	ATTAAA	-21	NA	69093990	69131069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
WTC11_00070951	chr5	+	4794	16	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	-74	36	combination_of_known_junctions	FALSE	canonical	3	125	junction_3	31.0304509939654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAATTAAGTAGATA	NA	False	NA	NA	False	NA	NA	NA	69093916	69131105	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
WTC11_00070953	chr5	+	1331	8	FSM	ENSG00000134057.15	ENST00000506572.5	1331	8	0	0	0	0	multi-exon	FALSE	canonical	3	5854	junction_6	153.226256608604	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGCATTGTAAGATG	69115838	True	NA	NA	False	NA	NA	NA	69167134	69177358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238
WTC11_00070958	chr5	+	767	5	FSM	ENSG00000134057.15	ENST00000507798.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2552.22226696657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTACTTTTAAT	69174233	False	NA	-14	True	AATAAA	-31	NA	69174256	69177700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69174410_69174876_69175114_69175396_69175538_69177290_69177350_69177523
WTC11_00070960	chr5	+	1404	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	-51	1	-42	0	multi-exon	TRUE	canonical	3	692	junction_3	94.5555392348857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTATTTTTTTTT	69180011	True	NA	28	True	AATAAA	-14	NA	69189531	69210356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
WTC11_00070961	chr5	+	1305	8	FSM	ENSG00000153044.10	ENST00000515001.5	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	262.180806906616	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTATTTTTTTTT	69180053	True	NA	28	True	AATAAA	-14	NA	69189573	69210356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69202505_69202570_69202918_69202971_69208195_69208360_69209706
WTC11_00070962	chr5	+	692	8	FSM	ENSG00000153044.10	ENST00000502689.1	692	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	300.777495901566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTAGTTATTTGTAGT	69189706	False	NA	18	True	NA	NA	NA	69189741	69209929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
WTC11_00070963	chr5	+	685	2	FSM	ENSG00000153044.10	ENST00000510742.1	724	2	39	0	39	0	multi-exon	FALSE	canonical	3	877	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCATTTCTGACATAT	NA	False	NA	-13	True	NA	NA	NA	69207769	69209801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69208360_69209706
WTC11_00070964	chr5	+	1688	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	-118	-370	-46	87	multi-exon	FALSE	canonical	3	44	junction_1	475.766282491262	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTTACTCAGTTGAC	69217699	False	NA	97	True	AATAGA	-19	NA	69217713	69230245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
WTC11_00070965	chr5	+	1384	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	-72	-1014	-46	87	multi-exon	FALSE	canonical	3	20	junction_1	505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTTACTCAGTTGAC	69217699	False	NA	97	True	AATAGA	-19	NA	69217713	69230245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69217872_69228199_69228388_69229207
WTC11_00070966	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	97.6740611535234	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	69211887	True	NA	10	True	AATAAA	-20	NA	69217759	69230158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
WTC11_00070972	chr5	+	1429	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	-7	4	0	-3	multi-exon	FALSE	canonical	3	619	junction_4	36.3774973582514	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACCCATATAGTATCACA	69232762	True	NA	13	True	AATAAA	-26	NA	69234878	69277426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
WTC11_00070976	chr5	+	3077	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	-23	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_3	77.1306411387144	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368021	True	NA	24	True	ATTAAA	-14	NA	69369794	69414801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
WTC11_00070979	chr5	+	3164	17	FSM	ENSG00000152942.19	ENST00000305138.8	3164	17	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	20.7390784510788	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368931	False	NA	24	True	ATTAAA	-14	NA	69370704	69414801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
WTC11_00070981	chr5	+	2648	16	FSM	ENSG00000152942.19	ENST00000358030.6	2648	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	54.6245366113068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	69369261	False	NA	22	True	ATTAAA	-12	NA	69371034	69414799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
WTC11_00070984	chr5	+	4392	6	FSM	ENSG00000152939.17	ENST00000454295.6	4376	6	-19	3	-8	-3	multi-exon	FALSE	canonical	3	15	junction_2	53.484951154507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCACGATGCTCAGGT	69414111	True	NA	9	True	AATAAA	-22	NA	69415107	69444327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69415171_69419370_69420532_69432526_69432676_69432921_69433094_69440449_69440501_69441531
WTC11_00070985	chr5	+	4809	7	NIC	ENSG00000152939.17	novel	1581	8	NA	NA	0	-55	intron_retention	FALSE	canonical	3	106	junction_1	15.0296004234607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATATTTTCACTTGT	69414232	True	NA	-43	True	NA	NA	NA	69415228	69444275	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
WTC11_00070987	chr5	+	6430	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	8	0	8	0	multi-exon	FALSE	canonical	3	27	junction_1	101.600935035067	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	NA	False	NA	9	True	NA	NA	NA	69492299	69558104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
WTC11_00070990	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	111.381491885743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	69489438	True	NA	NA	False	NA	NA	NA	69492789	69555253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
WTC11_00070991	chr5	+	6194	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	-19	6	-2	-6	multi-exon	FALSE	canonical	3	275	junction_3	31.0674669067177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTCAGTCTCCTCT	69489419	True	NA	3	True	NA	NA	NA	69492770	69558098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
WTC11_00070993	chr5	+	4568	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	-13	0	-13	0	multi-exon	FALSE	canonical	3	60	junction_1	171.875852270614	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	69556783	True	NA	NA	False	AATAAA	-24	NA	69560177	69595221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
WTC11_00070996	chr5	+	2986	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	-34	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	136.807504667446	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	69556813	True	NA	NA	False	NA	NA	NA	69560207	69593767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
WTC11_00071000	chr5	+	633	5	FSM	ENSG00000198237.8	ENST00000506490.2	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	21.6101827849743	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	NA	False	NA	NA	False	NA	NA	NA	69875270	69920867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731
WTC11_00071005	chr5	+	887	7	FSM	ENSG00000205571.14	ENST00000511812.5	867	7	-20	0	-20	0	multi-exon	FALSE	canonical	1	16	junction_3	852.387235943852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAATTTTGATGCCAA	NA	False	NA	NA	False	AAAAAG	-45	NA	70049617	70076706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70067293_70067447_70069234_70069331_70070640_70070752_70076520
WTC11_00071007	chr5	+	1492	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	-104	0	-78	0	multi-exon	FALSE	canonical	3	67	junction_5	852.118656104672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049559	70077592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
WTC11_00071008	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	534.89911312741	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
WTC11_00071009	chr5	+	1535	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	-56	3	-25	0	multi-exon	FALSE	canonical	3	566	junction_7	617.461625831922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049612	70077592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
WTC11_00071010	chr5	+	1553	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	-3	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	878.118585385824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049653	70077596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
WTC11_00071018	chr5	+	4383	17	Fusion	ENSG00000269983.1_ENSG00000226259.10	novel	1432	16	NA	NA	-33	-5	multi-exon	FALSE	canonical	0	0	junction_4	167.25088751633	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACCACTGATATATT	NA	False	NA	NA	False	AATAAA	-17	NA	70415318	70450348	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_70415390_70417821_70417920_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
WTC11_00071019	chr5	+	1055	9	FSM	ENSG00000226259.10	ENST00000507549.7	1055	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.706253767549	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAGTTGGTTGTACCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	70415395	70427991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70415551_70417821_70417920_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584
WTC11_00071020	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.921299994169	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	NA	False	NA	NA	False	NA	NA	NA	70415442	70448015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
WTC11_00071022	chr5	+	2680	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	-565	-1452	-256	1452	multi-exon	TRUE	canonical	3	253	junction_1	980.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTTTGTGGGCCTGG	NA	False	NA	NA	False	AATAAA	-32	NA	70900412	70909567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70901150_70901824_70901934_70907733
WTC11_00071025	chr5	+	1485	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	-65	25	0	0	multi-exon	FALSE	canonical	3	544	junction_7	544.190542860472	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70925029	70953015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
WTC11_00071027	chr5	+	1875	7	FSM	ENSG00000172062.17	ENST00000503079.6	1219	7	6	-662	6	-6	multi-exon	FALSE	canonical	3	64	junction_5	786.973404181418	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCTGTATCTGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	70925035	70953009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70946065_70946177_70951940
WTC11_00071028	chr5	+	1488	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	-12	6	0	-6	multi-exon	FALSE	canonical	3	1147	junction_7	403.48727907457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCTGTATCTGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	70925074	70953009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
WTC11_00071036	chr5	+	2125	11	FSM	ENSG00000131844.17	ENST00000683665.1	2110	11	-15	0	-11	0	multi-exon	FALSE	canonical	3	227	junction_6	30.3947363864206	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCACCAAATTG	NA	False	NA	NA	False	ATTAAA	-23	NA	71587264	71641967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002
WTC11_00071037	chr5	+	3635	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	-59	48	1	0	multi-exon	FALSE	canonical	2	164	junction_12	49.0763117501713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAATAGAACTATCAAATGT	NA	False	NA	-40	True	TTTAAA	-23	NA	71587280	71658658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00071038	chr5	+	3636	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	-15	0	1	0	multi-exon	FALSE	canonical	2	9	junction_11	107.146639442168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	NA	False	NA	-30	True	AATAGA	-3	NA	71587280	71658668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00071039	chr5	+	3585	16	FSM	ENSG00000131844.17	ENST00000683789.1	3574	16	-11	0	-11	0	multi-exon	FALSE	canonical	2	120	junction_6	65.7590213498413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587264	71658706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00071044	chr5	+	3379	6	FSM	ENSG00000131844.17	ENST00000682640.1	3239	6	-175	35	-175	0	multi-exon	FALSE	canonical	2	164	junction_1	70.7491342703216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	71642847	False	NA	-30	True	AATAGA	-3	NA	71642867	71658668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00071047	chr5	+	1686	2	NNC	ENSG00000131711.15	novel	11790	7	NA	NA	28371	389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTGTGCCACTGCACT	72207978	False	NA	NA	False	NA	NA	NA	72207998	72209954	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72209569_72209838
WTC11_00071048	chr5	+	1586	2	NNC	ENSG00000131711.15	novel	11790	7	NA	NA	28371	3323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGAACTAATGAGCCA	72207978	False	NA	NA	False	NA	NA	NA	72207998	72212888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72209560_72212863
WTC11_00071052	chr5	+	2022	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	7	0	1	0	multi-exon	FALSE	canonical	2	3	junction_4	34.4700957352892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	72318494	True	NA	NA	False	AATATA	-17	NA	72320373	72359352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
WTC11_00071055	chr5	+	8624	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	-159	-5437	-96	0	multi-exon	FALSE	canonical	3	179	junction_1	22.2573333732702	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	NA	False	NA	10	True	AATAAA	-15	NA	72848024	72914388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
WTC11_00071056	chr5	+	8620	25	NNC	ENSG00000083312.19	novel	3028	25	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5874742798284	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	NA	False	NA	10	True	AATAAA	-15	NA	72848024	72914388	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72848248_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
WTC11_00071057	chr5	+	2924	24	NIC	ENSG00000083312.19	novel	3028	25	NA	NA	0	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	48.8590813449012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGGCTTTAAATTTA	72836821	True	NA	38	True	AATAAA	-20	NA	72848183	72905578	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_72848252_72848384_72848499_72851237_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
WTC11_00071063	chr5	+	1264	4	FSM	ENSG00000157111.13	ENST00000287773.5	1247	4	-17	0	-17	0	multi-exon	FALSE	canonical	2	4	junction_3	9.80929264637478	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	73120427	True	NA	4	True	AATAAA	-14	NA	73120551	73131809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131540
WTC11_00071066	chr5	+	1167	5	FSM	ENSG00000145741.17	ENST00000677654.1	1143	5	-24	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	226.330924753998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAGAGGGGGGCATTT	73423297	True	NA	NA	False	NA	NA	NA	73498441	73505011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346
WTC11_00071067	chr5	+	2180	4	FSM	ENSG00000145741.17	ENST00000679077.1	2165	4	-15	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	2481.67582268291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAATAAAGTTCTTTGC	73423297	True	NA	5	True	NA	NA	NA	73498441	73505469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498800_73499133_73499203_73502487_73503118_73504346
WTC11_00071068	chr5	+	1209	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	-32	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	295.649285471824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTGTACACAGTAAAAAAA	73423297	True	NA	63	True	NA	NA	NA	73498441	73505527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
WTC11_00071069	chr5	+	1255	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	-11	32	0	-32	multi-exon	FALSE	canonical	3	613	junction_1	2159.07133740412	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	73423286	True	NA	-26	True	ATTAAA	-26	NA	73498430	73505635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
WTC11_00071077	chr5	+	1513	6	NNC	ENSG00000049860.14	novel	1684	6	NA	NA	3	-3723	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	182.517286852506	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAAGTCATAATCTTT	74680621	True	NA	NA	False	AATAAA	-13	NA	74685198	74701534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74700752
WTC11_00071078	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	40.6172785106224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	74680655	True	NA	30	True	AATAAA	-19	NA	74685232	74721288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
WTC11_00071079	chr5	+	720	6	FSM	ENSG00000049860.14	ENST00000513336.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	184.492818288409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	NA	False	NA	30	True	AATAAA	-19	NA	74715585	74721288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74715691_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
WTC11_00071082	chr5	+	3715	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	-78	700	-77	-700	multi-exon	FALSE	canonical	3	463	junction_5	24.071559982685	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATTTGAAAAGAAAGT	74761640	True	NA	NA	False	NA	NA	NA	74767170	74779413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
WTC11_00071087	chr5	+	4562	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	-32	0	8	0	multi-exon	TRUE	canonical	3	584	junction_7	67.6738143771619	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	75325483	True	NA	76	True	AGTAAA	-25	NA	75337187	75362101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
WTC11_00071088	chr5	+	3693	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	-12	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	160.337491283577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	75325515	True	NA	NA	False	AATAAA	-26	NA	75337219	75361423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
WTC11_00071089	chr5	+	6645	21	FSM	ENSG00000113161.17	ENST00000680940.1	6621	21	-24	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	222.158749546355	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGTGTGTGTG	75325541	True	NA	NA	False	NA	NA	NA	75337245	75364001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75340447_75340689_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
WTC11_00071090	chr5	+	6520	20	FSM	ENSG00000113161.17	ENST00000681410.1	6520	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	171.81801233538	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGTGTGTGTG	75326428	False	NA	NA	False	NA	NA	NA	75338132	75364001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75338304_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
WTC11_00071100	chr5	+	568	2	FSM	ENSG00000250802.7	ENST00000505918.5	568	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACATGACTGGCACAA	77086312	True	NA	NA	False	NA	NA	NA	77086766	77087916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77086905_77087486
WTC11_00071101	chr5	+	461	3	FSM	ENSG00000250802.7	ENST00000514114.5	527	3	0	66	0	-4	multi-exon	FALSE	canonical	3	4	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACTATTGACCACAGT	77087416	True	NA	NA	False	NA	NA	NA	77087462	77151325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77087620_77118319_77118522_77151223
WTC11_00071108	chr5	+	5597	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	45	-4039	45	129	multi-exon	FALSE	canonical	1	5	junction_1	162.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATGGCGCAATAGTTT	78457776	False	NA	NA	False	TTTAAA	-31	NA	78457837	78480868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78457952_78459244_78459363_78475503
WTC11_00071110	chr5	+	9096	11	FSM	ENSG00000152409.9	ENST00000396137.5	9096	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	5.8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGATTTTGTTTGTT	79235322	True	NA	8	True	AATAAA	-20	NA	79236130	79327211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675_79300864_79306374_79306462_79312402_79312499_79314256_79314852_79315999_79316311_79321605
WTC11_00071112	chr5	+	3228	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	29	junction_1	52.7255367181997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612427	79686648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00071113	chr5	+	5047	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	-6	59	0	-59	multi-exon	FALSE	canonical	3	103	junction_6	32.0417457294036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAACTCTGTGACTTGC	79609371	True	NA	-39	True	NA	NA	NA	79612434	79688187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00071116	chr5	+	3055	16	NIC	ENSG00000164329.14	novel	3129	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	52.6171074841634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609549	True	NA	11	True	AATAAA	-21	NA	79612612	79686648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00071117	chr5	+	3068	17	NNC	ENSG00000164329.14	novel	3223	16	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	76.9662821873968	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACATTGTTGAGGTGC	79609556	True	NA	-2	True	AATAAA	-8	NA	79612619	79686635	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79612692_79613010_79613076_79614471_79614561_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00071118	chr5	+	3478	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	11	-1	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTGCCTTTTTTTTCTG	79609388	True	NA	10	True	AATAAA	-20	NA	79612451	79686647	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00071121	chr5	+	3228	22	FSM	ENSG00000113296.14	ENST00000350881.6	3222	22	-6	0	-6	0	multi-exon	FALSE	canonical	3	60	junction_8	13.0072367786852	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	80034784	True	NA	22	True	AATAAA	-24	NA	80035341	80083287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
WTC11_00071124	chr5	+	10814	19	FSM	ENSG00000039319.17	ENST00000505560.5	10805	19	-9	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	24.5062350342837	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGATTTTCAATGC	80406364	True	NA	NA	False	AATAAA	-16	NA	80408054	80483379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
WTC11_00071128	chr5	+	2842	10	FSM	ENSG00000113319.13	ENST00000638442.1	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	13.1271088840735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTATGTTGTATTTTT	80960723	False	NA	42	True	ATTAAA	-32	NA	80960738	81088579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80961027_81042876_81042984_81068031_81068180_81070491_81070582_81073198_81073453_81080120_81080201_81080595_81080790_81085801_81085912_81086834_81086954_81087127
WTC11_00071129	chr5	+	2654	7	FSM	ENSG00000113319.13	ENST00000502677.1	2752	7	98	0	98	0	multi-exon	FALSE	canonical	3	25	junction_6	15.6249444443457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGACTGTAAAGTGTT	NA	False	NA	27	True	ATTAAA	-17	NA	81070121	81088564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81070582_81073198_81073453_81080120_81080201_81080595_81080790_81085801_81085912_81086834_81086954_81087127
WTC11_00071131	chr5	+	9220	4	ISM	ENSG00000131730.16_ENSG00000113319.13	ENST00000265080.9	8482	27	254929	-3884	-18028	3884	3prime_fragment	FALSE	canonical	3	30	junction_1	9.84321537348893	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGAATTGGCCCCACG	NA	False	NA	NA	False	ATTAAA	-23	NA	81215291	81234046	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_81215956_81217355_81217474_81219709_81219779_81225677
WTC11_00071140	chr5	+	1696	8	FSM	ENSG00000152422.16	ENST00000282268.7	1696	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	42.0830083506008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGTTTTTAATA	83074672	True	NA	11	True	AATAAA	-16	NA	83077497	83353758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
WTC11_00071141	chr5	+	1278	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	-37	2	-7	-2	multi-exon	FALSE	canonical	1	8	junction_7	53.1516889742586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGTTTGTGGTAGTTTG	83074694	True	NA	19	True	AATAAA	-19	NA	83077519	83311067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
WTC11_00071142	chr5	+	1676	8	FSM	ENSG00000152422.16	ENST00000396027.9	1602	8	-76	2	-27	0	multi-exon	FALSE	canonical	3	122	junction_1	20.6318556942354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGTTTTTAATA	NA	False	NA	11	True	AATAAA	-16	NA	83077470	83353758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
WTC11_00071144	chr5	+	9953	14	FSM	ENSG00000038427.16	ENST00000343200.9	9455	14	-499	1	-443	0	multi-exon	FALSE	canonical	3	210	junction_6	212.184412368277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	83471047	False	NA	23	True	AAGAAA	-24	NA	83471174	83582302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
WTC11_00071145	chr5	+	13058	14	ISM	ENSG00000038427.16	ENST00000265077.8	12345	15	-569	0	-443	0	intron_retention	FALSE	canonical	3	46	junction_6	255.725768429881	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	83471047	False	NA	23	True	AAGAAA	-24	NA	83471174	83582302	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348_83522310_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979
WTC11_00071147	chr5	+	12345	15	FSM	ENSG00000038427.16	ENST00000265077.8	12345	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	247.117215845734	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	83470040	True	NA	23	True	AAGAAA	-24	NA	83471743	83582302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348_83522310_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
WTC11_00071148	chr5	+	1837	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	-14	2	0	-2	multi-exon	FALSE	canonical	3	261	junction_2	15.6409718368137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATGCCTTCTAATCAT	83468629	True	NA	NA	False	AATAAA	-27	NA	83471776	83512938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
WTC11_00071149	chr5	+	9509	8	FSM	ENSG00000038427.16	ENST00000513016.5	8483	8	-60	-966	-60	0	multi-exon	FALSE	canonical	3	509	junction_7	88.7121002721381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	83535543	False	NA	23	True	AAGAAA	-24	NA	83535553	83582302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
WTC11_00071156	chr5	+	1900	3	FSM	ENSG00000127184.13	ENST00000510447.1	581	3	-289	-1030	-42	1016	multi-exon	FALSE	canonical	1	66	junction_1	5521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAAAAGTTGAAGCGGC	NA	False	NA	NA	False	CATAAA	-13	NA	86617885	86621978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618331_86619352_86619497_86620667
WTC11_00071157	chr5	+	673	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	-44	0	-31	0	multi-exon	FALSE	canonical	3	11108	junction_2	202.5	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	86572605	True	NA	11	True	AATAAA	-18	NA	86617896	86620962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618131_86619352_86619497_86620667
WTC11_00071161	chr5	+	5282	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	-21	0	1	0	multi-exon	FALSE	canonical	3	12	junction_3	47.6818157745231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	88266512	True	NA	-19	True	NA	NA	NA	88268895	88287627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
WTC11_00071162	chr5	+	2029	4	FSM	ENSG00000247828.9	ENST00000654762.1	2019	4	-10	0	-2	0	multi-exon	FALSE	canonical	3	10	junction_1	10.6562449087639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAATTCTGTTTTTAAT	88266505	True	NA	NA	False	TATAAA	-9	NA	88268888	88436922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88269467_88270586_88410072_88410195_88436272
WTC11_00071167	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	2	40	junction_2	34	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	88266640	True	NA	16	True	AATAAA	-43	NA	88269023	88436668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88436272
WTC11_00071170	chr5	+	671	6	FSM	ENSG00000247828.9	ENST00000688398.1	712	6	41	0	6	0	multi-exon	FALSE	canonical	3	22	junction_4	36.4549036482062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88269004	True	NA	11	True	AATAAA	-23	NA	88269055	88287657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
WTC11_00071172	chr5	+	763	8	FSM	ENSG00000113356.13	ENST00000503373.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	203.971886818367	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTAGGCATGAAATT	90474241	False	NA	NA	False	NA	NA	NA	90474260	90512129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90474319_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
WTC11_00071174	chr5	+	3297	8	NNC	ENSG00000113356.13	novel	3290	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_5	164.431488121084	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	90460371	True	NA	NA	False	AATAAA	-18	NA	90474849	90514553	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501908_90501989_90506527_90506675_90512052
WTC11_00071175	chr5	+	3304	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	405	junction_1	73.0375916629126	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	90460371	True	NA	NA	False	AATAAA	-22	NA	90474849	90514557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
WTC11_00071176	chr5	+	688	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	-6	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	209.382159910745	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	90460410	True	NA	92	True	CATAAA	-20	NA	90474888	90490858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
WTC11_00071177	chr5	+	3281	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	-30	0	-5	0	multi-exon	FALSE	canonical	3	236	junction_1	125.775147605169	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	90460380	True	NA	NA	False	AATAAA	-18	NA	90474858	90514553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
WTC11_00071179	chr5	+	1917	9	FSM	ENSG00000164199.18	ENST00000640109.1	2906	9	18	971	18	467	multi-exon	FALSE	canonical	2	8	junction_7	4.16645832812474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTGTATGATTAAAATA	90551806	True	NA	NA	False	AAGAAA	-41	NA	90558817	90629539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210_90627777_90628561_90628833_90629209
WTC11_00071183	chr5	+	1173	2	FSM	ENSG00000164199.18	ENST00000639884.1	1177	2	0	4	0	-4	multi-exon	FALSE	canonical	3	38	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCCGGGCGCAGTGG	90756549	False	NA	NA	False	NA	NA	NA	90756567	90759987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90757162_90759408
WTC11_00071186	chr5	+	1524	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-72	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	40.348482003664	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTATCATCCAGCT	90928473	True	NA	11	True	AATAAA	-11	NA	90929167	91164213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
WTC11_00071188	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_7	17.3547543918086	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	94616242	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
WTC11_00071189	chr5	+	3643	20	NIC	ENSG00000133302.13	novel	5583	21	NA	NA	13	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	32.126395116133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAATAATTAATATTCTT	94616273	True	NA	NA	False	AATAAA	-16	NA	94618699	94695862	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
WTC11_00071191	chr5	+	3628	9	FSM	ENSG00000164291.17	ENST00000513814.5	1958	9	-42	-1628	-6	206	multi-exon	FALSE	canonical	2	4	junction_3	44.474536253906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTCTTGATCTCCTG	95552352	True	NA	NA	False	NA	NA	NA	95555094	95605308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95580891_95580943_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
WTC11_00071192	chr5	+	1118	2	FSM	ENSG00000164291.17	ENST00000504763.1	1088	2	-30	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTGCATTC	95552394	True	NA	NA	False	AATAAA	-35	NA	95555136	95557057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95555405_95556207
WTC11_00071196	chr5	+	2535	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	-22	69	1	-69	multi-exon	FALSE	canonical	3	31	junction_2	12.3028451993838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGATTTTTCATTCTAAA	95646257	True	NA	NA	False	NA	NA	NA	95646754	95658013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
WTC11_00071198	chr5	+	5370	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	9.68939097779944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACGAAGTGTCCTGTA	95730902	True	NA	NA	False	AATAAA	-16	NA	95731335	95796361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
WTC11_00071199	chr5	+	4541	30	FSM	ENSG00000153113.24	ENST00000395812.6	4506	30	-39	4	-5	0	multi-exon	FALSE	canonical	3	48	junction_5	43.1644809281092	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	96660569	True	NA	NA	False	ATTAAA	-18	NA	96662197	96774679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00071200	chr5	+	4516	31	FSM	ENSG00000153113.24	ENST00000674984.1	4330	31	-186	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	30.93534476219	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCAAGGCATAAAATACA	96660608	True	NA	NA	False	NA	NA	NA	96662236	96774636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00071204	chr5	+	330	3	FSM	ENSG00000153113.24	ENST00000507836.1	449	3	0	119	0	-119	multi-exon	FALSE	canonical	2	4	junction_2	75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTTTAGCAACATAT	96660799	False	NA	NA	False	TTTAAA	-38	NA	96662427	96679513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96679316
WTC11_00071209	chr5	+	4267	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	-4	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.2159303944238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	96662766	True	NA	NA	False	NA	NA	NA	96662999	96774481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00071214	chr5	+	4360	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	-4	0	4	0	multi-exon	FALSE	canonical	3	39	junction_3	53.8359025142551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	96701352	True	NA	NA	False	ATTAAA	-18	NA	96702784	96774679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00071215	chr5	+	4298	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	-16	0	4	0	multi-exon	FALSE	canonical	3	83	junction_1	33.6349702614674	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96701352	True	NA	NA	False	ATTAAA	-22	NA	96702784	96774683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00071221	chr5	+	4463	3	FSM	ENSG00000174136.13	ENST00000513185.3	4463	3	0	0	0	0	multi-exon	FALSE	canonical	1	57	junction_2	46	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	98771805	True	NA	13	True	AATAAA	-22	NA	98773662	98796494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_98774207_98779579_98780089_98793084
WTC11_00071223	chr5	+	4175	25	FSM	ENSG00000145730.21	ENST00000682972.1	3649	25	-531	5	0	0	multi-exon	FALSE	canonical	0	0	junction_23	54.3076210888797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTTCAGAGCATTAG	102754754	True	NA	-6	True	NA	NA	NA	102754782	103029697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028181_103028239_103028886
WTC11_00071224	chr5	+	4285	25	FSM	ENSG00000145730.21	ENST00000348126.7	3649	25	-652	16	3	0	multi-exon	TRUE	canonical	0	0	junction_23	54.3076210888797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTTCAGAGCATTAG	102754659	False	NA	-6	True	NA	NA	NA	102754669	103029697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028184_103028239_103028886
WTC11_00071225	chr5	+	3688	24	FSM	ENSG00000145730.21	ENST00000510208.2	3978	24	290	0	-225	0	multi-exon	FALSE	canonical	3	57	junction_22	44.1190604317878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTAGCTGTCAGTGT	102755044	False	NA	4	True	AATAAA	-9	NA	102755072	103029707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
WTC11_00071228	chr5	+	3997	26	FSM	ENSG00000145730.21	ENST00000438793.8	3990	26	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	59.3302081573965	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102753853	True	NA	13	True	AATAAA	-18	NA	102755297	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028184_103028239_103028886
WTC11_00071229	chr5	+	4000	26	FSM	ENSG00000145730.21	ENST00000684529.1	3993	26	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	59.3302081573965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102753853	True	NA	13	True	AATAAA	-18	NA	102755297	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028181_103028239_103028886
WTC11_00071232	chr5	+	3749	24	NIC	ENSG00000145730.21	novel	3993	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_22	49.3562720219194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102865784	False	NA	13	True	AATAAA	-18	NA	102865818	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
WTC11_00071236	chr5	+	15384	31	FSM	ENSG00000145725.20	ENST00000358359.8	15369	31	-15	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_12	55.5526677027205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTAGTTGTTTATTT	103116760	True	NA	7	True	AGTAAA	-22	NA	103120285	103212799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
WTC11_00071237	chr5	+	5438	28	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	42.6617474016012	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATCTCTTACTTTTT	103116786	True	NA	45	True	ATTAAA	-45	NA	103120311	103203236	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103190841_103190983_103194899_103195026_103201521
WTC11_00071238	chr5	+	7343	30	NNC	ENSG00000145725.20	novel	15369	31	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_12	56.9833194192239	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTATAGTTATCACT	103116786	True	NA	10	True	AATAAA	-20	NA	103120311	103203523	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
WTC11_00071239	chr5	+	5903	29	NIC	ENSG00000145725.20	novel	5842	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	46.3907950712955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTATAGTTATCACT	103116728	True	NA	10	True	AATAAA	-20	NA	103120253	103203523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
WTC11_00071240	chr5	+	5664	31	NNC	ENSG00000145725.20	novel	4933	33	NA	NA	6	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	61.6488622946298	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAATGGTAAATTTT	103116870	True	NA	19	True	ATTAAA	-19	NA	103120395	103203210	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103176865_103176911_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
WTC11_00071251	chr5	+	1520	11	FSM	ENSG00000151422.14	ENST00000438717.6	1531	11	11	0	11	0	multi-exon	FALSE	canonical	2	16	junction_8	6.8847657912234	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTTCTACCATTATT	NA	False	NA	10	True	AATGAA	-20	NA	108897658	109187672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_108897849_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
WTC11_00071263	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	3	28	junction_1	187	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	112150072	True	NA	17	True	AATAAA	-17	NA	112160933	112162311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112160992_112161702_112161776_112162150
WTC11_00071267	chr5	+	10694	16	FSM	ENSG00000134982.17	ENST00000257430.9	10704	16	10	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.6382511095477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTCATACTGGTTTCC	112737158	True	NA	2	True	CATAAA	-18	NA	112737894	112846239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112737926_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
WTC11_00071270	chr5	+	5762	4	FSM	ENSG00000153037.15	ENST00000445150.3	833	4	-98	-4831	46	262	multi-exon	FALSE	canonical	3	919	junction_3	56.3875478767747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTCTCAAAATATTGTG	112861204	False	NA	39	True	AATAAA	-20	NA	112861233	112870050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620
WTC11_00071271	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	341.547580872709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	112853881	True	NA	NA	False	NA	NA	NA	112861286	112869788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
WTC11_00071275	chr5	+	871	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	-19	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	112963502	True	NA	6	True	ATTAAA	-14	NA	112976793	112984651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112976987_112983973
WTC11_00071276	chr5	+	4768	12	FSM	ENSG00000172795.17	ENST00000674880.1	4679	12	-89	0	14	0	multi-exon	TRUE	canonical	2	15	junction_2	107.374297061361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATCCTATAGAAAAG	112963432	True	NA	-50	True	TATAAA	-9	NA	112976723	113016649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112976987_112981041_112981172_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
WTC11_00071279	chr5	+	6442	29	ISM	ENSG00000047188.16	ENST00000161863.9	6305	30	-46	0	-46	0	intron_retention	FALSE	canonical	3	85	junction_13	14.2228527664575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	NA	False	NA	15	True	ATTAAA	-16	NA	113513647	113595284	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302
WTC11_00071280	chr5	+	5328	3	FSM	ENSG00000047188.16	ENST00000512600.1	6708	3	1380	0	1380	0	multi-exon	FALSE	canonical	3	104	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCAGATCTTATTTCTT	NA	False	NA	16	True	ATTAAA	-17	NA	113582645	113595285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_113584480_113591040_113591245_113591995
WTC11_00071284	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	505.119045374454	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	115836105	True	NA	40	True	NA	NA	NA	115841996	115914011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
WTC11_00071287	chr5	+	328	1	FSM	ENSG00000197575.6	ENST00000461663.1	408	1	22	58	22	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTCACTCAGCCTACAG	NA	False	NA	NA	False	NA	NA	NA	116716264	116716592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116716300_116716600
WTC11_00071289	chr5	+	327	1	FSM	ENSG00000197744.5	ENST00000397627.3	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGACAGCAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	118973795	118974122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_118973800_118974100
WTC11_00071290	chr5	+	11538	44	FSM	ENSG00000172869.15	ENST00000539542.6	11538	44	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_33	23.1328844013174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	119068959	True	NA	10	True	AATAAA	-19	NA	119071086	119249127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119206833_119206897_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
WTC11_00071292	chr5	+	11576	43	FSM	ENSG00000172869.15	ENST00000311085.8	11072	43	-511	7	-108	0	multi-exon	FALSE	canonical	3	31	junction_15	21.2359597474321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTTTAGGGGGTATA	NA	False	NA	3	True	AATAAA	-12	NA	119070978	119249120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
WTC11_00071296	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	119355989	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119356122_119392815
WTC11_00071297	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_8	87.7288096657456	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00071298	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	344.648369013824	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00071300	chr5	+	11278	21	FSM	ENSG00000133835.18	ENST00000683390.1	11908	21	0	630	0	-630	multi-exon	FALSE	canonical	3	970	junction_6	81.7065480852055	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTAGAGAATCTTTTTTC	119436142	True	NA	NA	False	ATTAAA	-2	NA	119452527	119544353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119536551_119541904
WTC11_00071302	chr5	+	4664	14	FSM	ENSG00000133835.18	ENST00000683372.1	4673	14	9	0	9	0	multi-exon	FALSE	canonical	3	971	junction_9	87.3836673838068	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	119491010	False	NA	126	True	TTTAAA	-5	NA	119491077	119542446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00071303	chr5	+	5445	2	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	39	junction_1	0	84	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATAGGATTTGGGTC	NA	False	NA	NA	False	NA	NA	NA	120697578	120703086	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_120702248_120702310
WTC11_00071304	chr5	+	1264	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-80334	383	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTTGTAGTTGCTTA	120700702	True	NA	NA	False	AATAAA	-11	NA	120700883	120791161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_120700940_120789953
WTC11_00071309	chr5	+	2127	16	NNC	ENSG00000205302.7	novel	6479	15	NA	NA	-50	19997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	360.541604934699	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTGTTACTTATGTAAAA	122768539	True	NA	NA	False	AAAACA	-25	NA	122775028	122854540	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597_122830108_122854507
WTC11_00071311	chr5	+	2085	15	FSM	ENSG00000205302.7	ENST00000514949.1	2119	15	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_13	362.31411138144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTGGTTTTATAT	122775224	False	NA	NA	False	AATAAA	-18	NA	122775236	122829755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122775763_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
WTC11_00071314	chr5	+	782	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	-194	0	-86	0	multi-exon	FALSE	canonical	3	60	junction_5	13.7462722219517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	122845413	False	NA	3	True	AATAAA	-16	NA	122845431	123002142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
WTC11_00071315	chr5	+	2168	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	-181	0	-86	0	multi-exon	FALSE	canonical	3	60	junction_5	14.2643689738531	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	122845413	False	NA	14	True	AATAAA	-16	NA	122845431	123009205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
WTC11_00071316	chr5	+	4340	12	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	0	-274	combination_of_known_junctions	FALSE	canonical	3	69	junction_8	42.7547300558518	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTGCTCTTTCCCAT	123508388	True	NA	16	True	AATAAA	-21	NA	123512098	123616766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123614341
WTC11_00071317	chr5	+	8111	12	Fusion	ENSG00000151292.17_ENSG00000288890.1	novel	4635	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	122	junction_8	31.4997048392311	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTCATATAATTTT	123508388	True	NA	NA	False	AATAAA	-23	NA	123512098	123620540	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123614341
WTC11_00071318	chr5	+	4037	13	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	235	-274	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	64.9300371339969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTGCTCTTTCCCAT	123512419	False	NA	16	True	AATAAA	-21	NA	123512494	123616766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123595038_123595135_123604723_123604831_123614341
WTC11_00071323	chr5	+	3313	6	NNC	ENSG00000164902.14	novel	3609	5	NA	NA	-345	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	42	junction_5	199.900575286816	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	126600569	False	NA	45	True	AATAAA	-24	NA	126600579	126627252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574_126625311_126625973
WTC11_00071324	chr5	+	3631	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	-22	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	52.5327278941423	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	126593947	True	NA	45	True	AATAAA	-24	NA	126600924	126627252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
WTC11_00071332	chr5	+	8533	8	FSM	ENSG00000164244.21	ENST00000442138.6	5504	8	-89	-2940	-78	6	multi-exon	TRUE	canonical	3	382	junction_7	33.6361079065643	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCGATTTTTTTTTT	NA	False	NA	23	True	AATAAA	-26	NA	127517561	127555091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818
WTC11_00071336	chr5	+	5509	26	FSM	ENSG00000064651.14	ENST00000343225.4	5509	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	4.71864387297876	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACCATGCCCAGCTAAT	128083824	False	NA	NA	False	NA	NA	NA	128083847	128188442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_128084711_128112813_128112934_128114211_128114288_128114585_128114682_128131066_128131207_128134164_128134276_128135699_128135809_128138596_128138725_128138823_128138909_128141829_128141982_128147621_128147730_128148753_128148878_128149996_128150099_128151240_128151397_128152705_128152806_128158052_128158165_128161659_128161801_128167760_128167868_128171666_128171747_128174540_128174667_128178566_128178690_128180882_128180995_128182854_128182942_128184365_128184502_128184788_128184857_128186495
WTC11_00071340	chr5	+	4386	22	NIC	ENSG00000145808.10	novel	5201	23	NA	NA	160	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	16.424775268794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTCATGTCTTCTAC	129460431	True	NA	12	True	AATAAA	-19	NA	129460457	129738684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_129460483_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
WTC11_00071342	chr5	+	627	3	FSM	ENSG00000186687.16	ENST00000510516.5	604	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	9	junction_2	70	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAATTATTACATTTAAA	131170909	False	NA	NA	False	NA	NA	NA	131170920	131199966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131171039_131180094_131180168_131199530
WTC11_00071343	chr5	+	6242	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	149	junction_1	12	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	131170909	False	NA	15	True	AATAAA	-25	NA	131170920	131205428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
WTC11_00071346	chr5	+	3756	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-24	4	intron_retention	FALSE	canonical	3	145	junction_5	28.5475042692001	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCTTTAAATTTTGT	131261669	True	NA	27	True	AATAAA	-23	NA	131263984	131394676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
WTC11_00071347	chr5	+	3509	5	FSM	ENSG00000158985.14	ENST00000395246.5	3485	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	19	junction_1	97.2891951863104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTAGTTTTTCT	131261669	True	NA	38	True	AATAAA	-34	NA	131263984	131394687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391917
WTC11_00071348	chr5	+	4404	5	FSM	ENSG00000158985.14	ENST00000505065.2	4404	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	19.7863589374094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	131261737	True	NA	23	True	AATAAA	-19	NA	131264052	131394672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992
WTC11_00071349	chr5	+	3689	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	-101	3	-35	0	multi-exon	FALSE	canonical	3	24	junction_5	72.9783529548317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTAGTTTTTCT	131261658	True	NA	38	True	AATAAA	-34	NA	131263973	131394687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
WTC11_00071353	chr5	+	3168	10	NIC	ENSG00000197375.14	novel	3117	10	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	6.06955568166563	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAACTGCCTAGAATCT	132369455	True	NA	6	True	AGTAAA	-16	NA	132369750	132395611	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_132370366_132378377_132378482_132384146_132384321_132385327_132385500_132387024_132387152_132388920_132389022_132390775_132390905_132392432_132392616_132393675_132393812_132394184
WTC11_00071358	chr5	+	643	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	-41	-16	-25	0	multi-exon	FALSE	canonical	3	5617	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	132851225	True	NA	24	True	AATAAA	-29	NA	132866604	132867699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132867036_132867487
WTC11_00071359	chr5	+	270	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	-12	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	132851250	True	NA	24	True	AATAAA	-29	NA	132866629	132867699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132866688_132867487
WTC11_00071360	chr5	+	1588	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	-15	0	-3	0	multi-exon	FALSE	canonical	3	4175	junction_1	721	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	132851247	True	NA	NA	False	AATAAA	-19	NA	132866626	132868847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132866688_132866868_132867036_132867487
WTC11_00071361	chr5	+	829	3	FSM	ENSG00000164406.8	ENST00000296877.3	861	3	0	32	0	-32	multi-exon	FALSE	canonical	2	3	junction_1	10	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGACTCTGTCTCAAAA	132873643	False	NA	NA	False	NA	NA	NA	132873667	132875014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132873752_132873949_132874090_132874409
WTC11_00071363	chr5	+	2793	19	NNC	ENSG00000170606.16	novel	4774	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_12	376.6752047541	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	133020097	True	NA	18	True	ATTAAA	-19	NA	133052018	133104477	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092702_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
WTC11_00071365	chr5	+	710	3	FSM	ENSG00000170606.16	ENST00000514825.1	690	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	1794	junction_1	27	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	133101495	False	NA	18	True	ATTAAA	-19	NA	133101575	133104477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_133101879_133103864_133104027_133104232
WTC11_00071367	chr5	+	3338	11	FSM	ENSG00000081059.20	ENST00000395029.5	3330	11	-8	0	-8	0	multi-exon	FALSE	canonical	3	17	junction_10	13.2170344631464	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	134113776	True	NA	4	True	AATAAA	-17	NA	134114703	134148210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134144796_134144870_134146223
WTC11_00071368	chr5	+	3288	10	FSM	ENSG00000081059.20	ENST00000342854.10	3288	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	11.7389296418286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	134113753	True	NA	4	True	AATAAA	-17	NA	134114680	134148210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134146223
WTC11_00071369	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_1	9.04654630231891	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	134369552	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
WTC11_00071380	chr5	+	1347	3	NIC	ENSG00000164615.6	novel	2171	4	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	87	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734085	True	NA	15	True	AATAAA	-16	NA	134738525	134751377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_134738793_134741062_134741524_134750758
WTC11_00071381	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	7.78888096369861	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	134734107	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
WTC11_00071382	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	85	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734142	True	NA	15	True	AATAAA	-16	NA	134738582	134751377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134743986_134744053_134750758
WTC11_00071383	chr5	+	5350	2	FSM	ENSG00000164615.6	ENST00000677966.1	5350	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	134739730	False	NA	NA	False	NA	NA	NA	134739743	134751799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134744053_134750758
WTC11_00071385	chr5	+	3565	23	FSM	ENSG00000145833.16	ENST00000507392.5	3565	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	231.886019485992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGCTATTCACTTTATC	134738015	True	NA	4	True	AATAAA	-15	NA	134758778	134829039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134758956_134763903_134764093_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790105_134790223_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
WTC11_00071386	chr5	+	5674	23	FSM	ENSG00000145833.16	ENST00000452510.7	5674	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	145.974779888981	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	134738015	True	NA	8	True	AATAAA	-17	NA	134758778	134831121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
WTC11_00071387	chr5	+	5646	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	-1825	0	0	multi-exon	FALSE	canonical	2	223	junction_19	110.337620492141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	134738040	True	NA	8	True	AATAAA	-17	NA	134758803	134831121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
WTC11_00071397	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	134903505	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134905200_134905700
WTC11_00071402	chr5	+	2759	17	FSM	ENSG00000120708.17	ENST00000442011.7	2712	17	-62	15	-62	0	multi-exon	TRUE	canonical	2	10	junction_6	5.66237582645306	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAGAAACATACGTCC	NA	False	NA	NA	False	NA	NA	NA	136028925	136063803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136029190_136033762_136033862_136044057_136044123_136046334_136046496_136046850_136047016_136047273_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715_136054862_136055679_136055817_136056664_136056796_136059089_136059215_136060833_136060937_136061499_136061580_136062662_136062688_136063185
WTC11_00071405	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	45.6302799572783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	136129890	True	NA	11	True	AATAAA	-13	NA	136132844	136182733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
WTC11_00071418	chr5	+	1686	5	FSM	ENSG00000120709.11	ENST00000434981.6	1686	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.3022290635584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGGGCCACACAGAC	138336786	False	NA	NA	False	ACTAAA	-13	NA	138337510	138346972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138337853_138341183_138341414_138341808_138341867_138344824_138345610_138346701
WTC11_00071419	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	18.7683243791235	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138333204	True	NA	28	True	AATAAA	-33	NA	138338265	138349729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
WTC11_00071438	chr5	+	6126	5	FSM	ENSG00000281398.4	ENST00000507692.5	575	5	-14	-5537	-13	26	multi-exon	FALSE	canonical	2	5	junction_1	120.36481005676	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGACATGTGGCGCCATA	139263651	True	NA	42	True	AATAAA	-39	NA	139274088	139284925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139274363_139274430_139276120_139276151_139278326_139278409_139279050
WTC11_00071439	chr5	+	2451	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	-42	-26	-13	26	multi-exon	FALSE	canonical	3	28	junction_4	89.9704812702477	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGACATGTGGCGCCATA	139263651	True	NA	42	True	AATAAA	-39	NA	139274088	139284925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
WTC11_00071441	chr5	+	6060	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	-42	-5339	-13	26	multi-exon	FALSE	canonical	3	179	junction_1	33.0252428706689	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGACATGTGGCGCCATA	139263651	True	NA	42	True	AATAAA	-39	NA	139274088	139284925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
WTC11_00071442	chr5	+	2258	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	-15	0	-14	0	multi-exon	FALSE	canonical	3	12	junction_4	1096.56809630946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	139263651	True	NA	-26	True	AAGAAA	-23	NA	139274088	139329757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071443	chr5	+	3984	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	-14	0	-14	0	multi-exon	FALSE	canonical	3	48	junction_4	1060.07183604596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	139263651	True	NA	5	True	AATAAA	-7	NA	139274088	139330394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071445	chr5	+	5528	19	FSM	ENSG00000280987.4	ENST00000394800.6	5513	19	-15	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_5	1186.15812162889	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTTTGTTTTACAGT	139263651	True	NA	3	True	AATGAA	-14	NA	139274088	139331671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139293452_139293576_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
WTC11_00071446	chr5	+	881	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	-16	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	89.376954524083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	139263664	True	NA	NA	False	NA	NA	NA	139274101	139283244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
WTC11_00071451	chr5	+	5093	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	-24	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	445.291947341682	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	139263296	True	NA	9	True	AATGAA	-20	NA	139293715	139331677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071453	chr5	+	2526	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	-8	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	654.667194912556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	139263322	True	NA	NA	False	AAGAAA	-42	NA	139293741	139330002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071454	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	697.855973094501	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139263358	True	NA	-31	True	NA	NA	NA	139293777	139330441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071457	chr5	+	7258	13	FSM	ENSG00000015479.20	ENST00000505625.5	7306	13	48	0	48	0	multi-exon	FALSE	canonical	3	2066	junction_10	348.739476145478	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTATTTGTCAGTTGT	139310068	False	NA	-35	True	AAGAAA	-44	NA	139310090	139330437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00071462	chr5	+	1472	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	3644	junction_3	239.708619415786	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	139310171	True	NA	12	True	AATAAA	-16	NA	139341837	139369717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
WTC11_00071463	chr5	+	1170	7	FSM	ENSG00000131508.16	ENST00000505007.5	1170	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1107.15798581574	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAGATAGAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	139561166	139623444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139561816_139562243_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367
WTC11_00071464	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	2007	junction_1	243.165752797003	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	139538798	True	NA	7	True	AATAAA	-24	NA	139561338	139628434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
WTC11_00071466	chr5	+	1113	7	FSM	ENSG00000131508.16	ENST00000505548.5	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	874.35264942445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGGTGGGTATGGTGTG	139561613	False	NA	-90	True	NA	NA	NA	139562028	139627115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
WTC11_00071468	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	89	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139644574	True	NA	34	True	AATAAA	-25	NA	139648348	139683882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139648846_139680363_139681448_139682862
WTC11_00071469	chr5	+	2672	4	NIC	ENSG00000171604.12	novel	2601	3	NA	NA	15	-8	intron_retention	FALSE	canonical	3	62	junction_1	327.078312063368	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGAAGCACCGCTGGCT	139644589	True	NA	26	True	AATAAA	-17	NA	139648363	139683874	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_139648846_139679846_139679941_139680363_139681448_139682862
WTC11_00071471	chr5	+	2098	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	-221	15	0	0	multi-exon	FALSE	canonical	3	96	junction_1	336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATGAAAGTTCT	139648616	False	NA	NA	False	NA	NA	NA	139648711	139683578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139649010_139680363_139681448_139682862
WTC11_00071475	chr5	+	5430	1	FSM	ENSG00000185129.8	ENST00000331327.5	11511	1	-122	6203	-122	3862	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTACTCACTGTTTT	140113870	False	NA	16	True	AATAAA	-17	NA	140113986	140119416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140114000_140119400
WTC11_00071481	chr5	+	2139	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	-4	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	33.520739848637	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387819	True	NA	13	True	AATAAA	-22	NA	140401849	140472477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
WTC11_00071483	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_33	107.34278489674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	140387877	True	NA	4	True	AGTAAA	-6	NA	140401907	140549569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
WTC11_00071486	chr5	+	6328	24	NIC	ENSG00000131503.21	novel	8195	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	29.4169556188739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAAGTGGGGTGTGAT	NA	False	NA	11	True	AATAAA	-13	NA	140482579	140539848	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
WTC11_00071489	chr5	+	4079	13	FSM	ENSG00000131503.21	ENST00000431508.5	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_9	21.2032164750749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	140510095	False	NA	12	True	AATAAA	-14	NA	140510109	140539849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
WTC11_00071491	chr5	+	3511	9	FSM	ENSG00000131503.21	ENST00000435794.5	3511	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	56.1577020541261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTGTGATCCTTTCAG	NA	False	NA	19	True	AATAAA	-21	NA	140526032	140539856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538235_140538918_140539084_140539358
WTC11_00071492	chr5	+	2243	8	FSM	ENSG00000254996.5	ENST00000437495.1	2243	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	50.0110191939369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	NA	False	NA	4	True	AGTAAA	-6	NA	140528913	140549569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140529797_140535361_140535539_140537337_140537590_140538085_140538235_140538918_140539084_140542171_140542282_140548905_140549077_140549233
WTC11_00071495	chr5	+	716	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	-30	7	-30	-7	multi-exon	FALSE	canonical	3	47	junction_1	28	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	140547152	True	NA	4	True	AGTAAA	-6	NA	140547631	140549569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140547841_140548905_140549077_140549233
WTC11_00071497	chr5	+	3617	2	FSM	ENSG00000176087.16	ENST00000514199.1	3617	2	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	140560131	False	NA	19	True	AATAAA	-40	NA	140564890	140569100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140565972_140566564
WTC11_00071499	chr5	+	1890	12	FSM	ENSG00000113119.13	ENST00000394671.8	1865	12	-25	0	-9	0	multi-exon	FALSE	canonical	3	77	junction_8	16.03560088889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	140636937	True	NA	19	True	AATAAA	-19	NA	140639425	140645404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
WTC11_00071501	chr5	+	1849	12	NNC	ENSG00000113119.13	novel	1865	12	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	31.1546396263532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCTACTTTGCCTCAG	140636976	True	NA	14	True	AATAAA	-14	NA	140639464	140645399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642921_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
WTC11_00071503	chr5	+	1953	10	FSM	ENSG00000113119.13	ENST00000510336.5	1953	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	17.1557858361056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	140641294	False	NA	23	True	AATAAA	-23	NA	140641305	140645408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
WTC11_00071510	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	63.795297632349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	140660449	True	NA	21	True	AGTAAA	-18	NA	140664867	140672344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
WTC11_00071513	chr5	+	1696	4	FSM	ENSG00000120314.19	ENST00000520764.1	1696	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	79.3263302231149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAACAGCTATGCTCA	140668910	False	NA	43	True	AGTAAA	-40	NA	140668920	140672366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140668991_140669078_140669249_140669332_140669691_140671268
WTC11_00071518	chr5	+	2492	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	-24	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	22.4493256518369	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	NA	False	NA	12	True	AATAAA	-13	NA	140691430	140699305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
WTC11_00071519	chr5	+	2322	14	FSM	ENSG00000112855.17	ENST00000645749.1	2292	14	3	-33	3	0	multi-exon	FALSE	canonical	3	55	junction_1	41.6775449310452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTTGGATAACATGTTAA	140689841	True	NA	-25	True	NA	NA	NA	140691472	140699268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691516_140691606_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
WTC11_00071520	chr5	+	2472	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	-3	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	65.9784795468462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689823	True	NA	-2	True	NA	NA	NA	140691454	140699291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
WTC11_00071525	chr5	+	1541	6	FSM	ENSG00000146007.11	ENST00000274712.8	1544	6	0	3	0	-3	multi-exon	FALSE	canonical	3	204	junction_1	23.8109218637162	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTCCCTGTGAATATT	140694822	True	NA	37	True	AATAAA	-44	NA	140700446	140706683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140703992_140704425_140704572_140705612
WTC11_00071528	chr5	+	2820	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	-12	0	1	0	multi-exon	FALSE	canonical	3	29	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	140806525	True	NA	NA	False	NA	NA	NA	140807068	140817546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140809573_140817230
WTC11_00071532	chr5	+	1140	1	FSM	ENSG00000204962.6	ENST00000378123.4	2616	1	-485	1961	-485	-1961	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGATTACTTCATGCTA	140840616	False	NA	NA	False	NA	NA	NA	140840701	140841841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140840700_140841800
WTC11_00071535	chr5	+	18630	1	FSM	ENSG00000250120.8	ENST00000562220.2	12358	1	0	-6272	0	6272	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCAATGAGATTAGGCT	140854984	True	NA	NA	False	AAAAAG	-36	NA	140855882	140874512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140855900_140874500
WTC11_00071536	chr5	+	3788	4	FSM	ENSG00000250120.8	ENST00000506939.6	3788	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	75.5836549056004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCCAAGACTTCTGC	140855111	False	NA	55	True	NA	NA	NA	140856009	141011628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140857648_140978948_140979008_140982474_140982564_141009626
WTC11_00071538	chr5	+	5407	4	FSM	ENSG00000249158.7	ENST00000398640.7	5407	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	69.4694177318336	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140868133	True	NA	NA	False	AATAAA	-20	NA	140868956	141012347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140871495_140978948_140979008_140982474_140982564_141009626
WTC11_00071542	chr5	+	5407	4	FSM	ENSG00000251664.5	ENST00000398631.3	5401	4	-6	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	68.528988189103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140875023	True	NA	NA	False	AATAAA	-20	NA	140875301	141012347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626
WTC11_00071543	chr5	+	5416	4	FSM	ENSG00000239389.8	ENST00000289272.3	5408	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	14	junction_1	78.8768378901915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140881940	True	NA	NA	False	AATAAA	-20	NA	140882115	141012347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140884663_140978948_140979008_140982474_140982564_141009626
WTC11_00071544	chr5	+	4884	5	FSM	ENSG00000239389.8	ENST00000409494.5	4884	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	77.0531472426662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	140882032	True	NA	NA	False	AATAAA	-17	NA	140882207	141012344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140884663_140978948_140979008_140982474_140982564_141009626_141009729_141010165
WTC11_00071546	chr5	+	5725	4	FSM	ENSG00000243232.6	ENST00000289269.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	57.2499393497981	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140965877	True	NA	NA	False	AATAAA	-20	NA	140966475	141012347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626
WTC11_00071547	chr5	+	5007	5	NIC	ENSG00000243232.6	novel	5725	4	NA	NA	281	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	65.1666133844625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140966694	True	NA	NA	False	AATAAA	-20	NA	140966756	141012347	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626_141009729_141010165
WTC11_00071552	chr5	+	3361	1	FSM	ENSG00000113205.5	ENST00000231130.3	3355	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTTCTTTTCCATTT	141099830	True	NA	NA	False	ATTAAA	-19	NA	141100466	141103827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141100500_141103800
WTC11_00071555	chr5	+	2902	1	FSM	ENSG00000113209.9	ENST00000231134.8	3410	1	12	496	-11	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATATTCTGC	141134290	True	NA	2	True	AATAAA	-15	NA	141135217	141138119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141135200_141138100
WTC11_00071577	chr5	+	4641	4	FSM	ENSG00000261934.3	ENST00000573521.2	4776	4	135	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_1	123.45309500643	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141402494	False	NA	24	True	AATAAA	-17	NA	141402912	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141405377_141494806_141494866_141505392_141505482_141510946
WTC11_00071578	chr5	+	4601	1	FSM	ENSG00000253305.3	ENST00000616430.1	4601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATTATAAGACTTTT	141407717	True	NA	NA	False	AATAAA	-22	NA	141408020	141412621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141408000_141412600
WTC11_00071579	chr5	+	4777	4	FSM	ENSG00000253305.3	ENST00000520790.2	4777	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	116.536117434324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141407717	True	NA	24	True	AATAAA	-17	NA	141408020	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141410621_141494806_141494866_141505392_141505482_141510946
WTC11_00071580	chr5	+	4823	4	FSM	ENSG00000253846.3	ENST00000398610.3	4802	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	29	junction_1	110.097936200256	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141412517	True	NA	24	True	AATAAA	-17	NA	141412965	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141415612_141494806_141494866_141505392_141505482_141510946
WTC11_00071581	chr5	+	9469	4	FSM	ENSG00000254122.3	ENST00000398594.4	4775	4	-4694	0	-4662	0	multi-exon	FALSE	canonical	3	35	junction_1	107.344719892917	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141412534	True	NA	24	True	AATAAA	-17	NA	141412982	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141420275_141494806_141494866_141505392_141505482_141510946
WTC11_00071583	chr5	+	6714	4	FSM	ENSG00000253873.6	ENST00000398587.7	4787	4	-3406	1479	-3402	313	multi-exon	FALSE	canonical	3	26	junction_1	111.475956550679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATCAGGCCCATCCAT	141417175	True	NA	NA	False	NA	NA	NA	141417644	141511496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141423661_141494806_141494866_141505392_141505482_141510946
WTC11_00071586	chr5	+	4771	4	FSM	ENSG00000240184.7	ENST00000308177.5	4758	4	-13	0	6	0	multi-exon	FALSE	canonical	3	72	junction_1	90.4691475955569	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141474571	True	NA	24	True	AATAAA	-17	NA	141475952	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141478547_141494806_141494866_141505392_141505482_141510946
WTC11_00071588	chr5	+	4766	4	FSM	ENSG00000242419.6	ENST00000306593.2	4763	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	21	junction_1	113.774631032874	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141484591	True	NA	24	True	AATAAA	-17	NA	141485026	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141487616_141494806_141494866_141505392_141505482_141510946
WTC11_00071590	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_1	38.0996500421373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635569	True	NA	12	True	AATAAA	-17	NA	141636996	141641064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
WTC11_00071594	chr5	+	2307	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_12	53.9665534279232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	141917820	True	NA	-20	True	NA	NA	NA	141923798	141940120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
WTC11_00071595	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	58.9693894227241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	141917876	True	NA	-20	True	NA	NA	NA	141923854	141940120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
WTC11_00071596	chr5	+	1458	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-48	444	7	0	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGAGTGATCTAAGTCT	141917883	True	NA	11	True	ATTAAA	-25	NA	141923861	141933882	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
WTC11_00071597	chr5	+	1610	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	36	5124	-19	0	5prime_fragment	FALSE	canonical	3	193	junction_9	16.2351546624472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACAGGGTGGTTGTGAG	141917912	True	NA	31	True	TTTAAA	-36	NA	141923890	141934996	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
WTC11_00071600	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	-1	1	0	1	multi-exon	FALSE	canonical	3	84	junction_1	25.2830847603689	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAATTTCATGAAAGCCT	141969090	False	NA	8	True	AATAAA	-15	NA	141969103	141990291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
WTC11_00071601	chr5	+	4060	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	153	0	-56	0	multi-exon	FALSE	canonical	3	14	junction_1	45.4245281219524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	141968897	True	NA	7	True	AATAAA	-14	NA	141969038	141990290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
WTC11_00071602	chr5	+	3174	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	-269	0	-44	0	multi-exon	FALSE	canonical	3	32	junction_3	40.7816485339038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	NA	False	NA	19	True	AATAAA	-28	NA	141968841	141989185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
WTC11_00071613	chr5	+	9396	23	FSM	ENSG00000145819.18	ENST00000274498.9	9395	23	-5	4	-5	0	multi-exon	FALSE	canonical	3	26	junction_21	12.1529508711273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGTTTCTGATAG	142767607	True	NA	14	True	ATTAAA	-22	NA	142770371	143229007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207474_143213996_143214089_143222357
WTC11_00071614	chr5	+	9231	23	FSM	ENSG00000145819.18	ENST00000645722.2	9226	23	-5	0	-5	0	multi-exon	FALSE	canonical	3	34	junction_21	11.1751643173898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGTTTCTGATAG	142767607	True	NA	14	True	ATTAAA	-22	NA	142770371	143229007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207309_143213996_143214089_143222357
WTC11_00071622	chr5	+	4655	22	FSM	ENSG00000113649.13	ENST00000296702.9	4654	22	-1	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	182.886356793321	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	146430925	True	NA	NA	False	AATAAA	-14	NA	146447310	146511961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
WTC11_00071623	chr5	+	4706	23	FSM	ENSG00000113649.13	ENST00000679501.2	4684	23	-22	0	0	0	multi-exon	FALSE	canonical	3	100	junction_13	241.690213063974	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	146430925	True	NA	NA	False	AATAAA	-14	NA	146447310	146511961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
WTC11_00071624	chr5	+	4261	23	FSM	ENSG00000113649.13	ENST00000549332.1	3518	23	0	-743	0	0	multi-exon	FALSE	canonical	3	130	junction_21	233.07009994335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATTGTATATGATTAT	146430960	True	NA	14	True	AATAAA	-18	NA	146447345	146511508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
WTC11_00071627	chr5	+	3787	11	FSM	ENSG00000113649.13	ENST00000506524.5	3787	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	274.972889572772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATTGTATATGATTAT	146481165	False	NA	14	True	AATAAA	-18	NA	146481175	146511508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
WTC11_00071634	chr5	+	1920	4	FSM	ENSG00000280780.3	ENST00000626945.2	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	76.8027777275449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTGAGCATCCGTCT	147555009	True	NA	6	True	AATAAA	-16	NA	147559993	147662009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147560138_147594359_147594478_147595439_147595541_147660452
WTC11_00071635	chr5	+	900	4	FSM	ENSG00000280780.3	ENST00000689846.1	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	67.5886249469704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGAATTGGTCTGTTT	147555009	True	NA	10	True	AATAAA	-33	NA	147559993	147618972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147618450
WTC11_00071637	chr5	+	254	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACCCTTAATCCCAGC	NA	False	NA	NA	False	NA	NA	NA	147866305	147866559	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_147866300_147866600
WTC11_00071638	chr5	+	1246	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	-806	0	-806	0	multi-exon	FALSE	canonical	3	158	junction_1	529.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869837	False	NA	NA	False	AATAAA	-12	NA	147869875	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147870755_147881445_147881649_147882026
WTC11_00071639	chr5	+	1510	4	NNC	ENSG00000164265.9	novel	549	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_1	393.35932117538	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
WTC11_00071640	chr5	+	585	4	NNC	ENSG00000164265.9	novel	440	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	464.128095345336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870755_147872176_147872322_147881445_147881649_147882026
WTC11_00071641	chr5	+	1452	5	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-804	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	457.043419709769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869839	False	NA	NA	False	AATAAA	-12	NA	147869877	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870755_147871616_147871680_147872176_147872322_147881445_147881649_147882026
WTC11_00071642	chr5	+	942	4	NNC	ENSG00000164265.9	novel	440	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	534.060545880958	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870755_147871616_147872119_147881445_147881649_147882026
WTC11_00071643	chr5	+	1544	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-897	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869746	True	NA	NA	False	AATAAA	-12	NA	147869784	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870962_147881445_147881649_147882026
WTC11_00071644	chr5	+	792	4	NNC	ENSG00000164265.9	novel	440	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	475.479407195166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870962_147872176_147872322_147881445_147881649_147882026
WTC11_00071646	chr5	+	731	5	NNC	ENSG00000164265.9	novel	672	3	NA	NA	106	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_2	487.014116838516	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871524	False	NA	NA	False	AATAAA	-13	NA	147871603	147882191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147871680_147872176_147872322_147878457_147878600_147881445_147881649_147882026
WTC11_00071647	chr5	+	671	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	1	0	0	multi-exon	FALSE	canonical	3	783	junction_1	217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147871352	True	NA	NA	False	AATAAA	-12	NA	147872017	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147872322_147881445_147881649_147882026
WTC11_00071649	chr5	+	5973	33	FSM	ENSG00000133710.16	ENST00000256084.8	3651	33	-1635	-687	-1627	687	multi-exon	FALSE	canonical	2	12	junction_1	11.2936652597817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGGTGGATGAAATGCT	NA	False	NA	NA	False	NA	NA	NA	148062344	148138069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148064100_148065346_148065373_148070322_148070451_148072147_148072221_148086404_148086533_148088541_148088606_148089493_148089622_148091164_148091229_148094353_148094482_148095817_148095906_148097866_148097995_148099233_148099316_148100453_148100582_148101354_148101437_148101780_148101909_148104951_148105001_148107036_148107165_148108752_148108838_148111767_148111896_148112867_148112935_148114361_148114490_148116369_148116467_148118436_148118565_148118985_148119059_148120008_148120137_148120294_148120392_148123832_148123961_148124764_148124838_148125722_148125851_148126982_148127080_148131258_148131390_148133796_148133888_148136982
WTC11_00071655	chr5	+	1304	9	FSM	ENSG00000157510.14	ENST00000455574.6	1289	9	-15	0	-3	0	multi-exon	TRUE	canonical	3	44	junction_7	7.59522876548166	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCATGAACAAACGAG	149271162	True	NA	NA	False	AATAAA	-16	NA	149271855	149312375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111
WTC11_00071660	chr5	+	4106	4	FSM	ENSG00000164284.15	ENST00000507562.1	4109	4	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_1	115.26491226735	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	149345582	True	NA	13	True	AATAAA	-22	NA	149345621	149354583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149345826_149348271_149348426_149349653_149349736_149350917
WTC11_00071664	chr5	+	4024	4	FSM	ENSG00000145882.11	ENST00000503240.5	4172	4	148	0	-39	0	multi-exon	FALSE	canonical	3	44	junction_2	7.84573486395988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACCTGTTCTTTTCT	149361079	False	NA	20	True	AGTAAA	-16	NA	149362200	149369653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149364211_149365941_149366154_149367359_149367501_149367992
WTC11_00071665	chr5	+	3302	3	FSM	ENSG00000145882.11	ENST00000507621.1	4887	3	1584	1	1584	-1	multi-exon	FALSE	canonical	3	44	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGACCTGTTCTTTTC	149363531	False	NA	19	True	AGTAAA	-15	NA	149364652	149369652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149366154_149367359_149367501_149367992
WTC11_00071668	chr5	+	4811	11	FSM	ENSG00000155846.17	ENST00000394320.7	4803	11	-8	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_4	8.15107354892593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAATG	149728315	True	NA	NA	False	NA	NA	NA	149730292	149847704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
WTC11_00071671	chr5	+	5258	20	FSM	ENSG00000113716.13	ENST00000502717.6	5258	20	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_9	28.3726683667453	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	149997666	True	NA	14	True	AATAAA	-14	NA	150000738	150053128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
WTC11_00071676	chr5	+	3424	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	-24	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_15	279.100036635302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	150330698	True	NA	0	True	AGTAAA	-13	NA	150357693	150384249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
WTC11_00071677	chr5	+	3536	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	-10	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_15	320.656598748549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	150330698	True	NA	4	True	AGTAAA	-17	NA	150357693	150384253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
WTC11_00071681	chr5	+	5029	27	FSM	ENSG00000070814.22	ENST00000643257.2	5026	27	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_15	208.362678801075	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCCAGTGCATCTGG	150330698	True	NA	19	True	AATAAA	-19	NA	150357693	150400293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
WTC11_00071682	chr5	+	5095	27	FSM	ENSG00000070814.22	ENST00000377797.7	5095	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	233.139776369121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCACATGTTTCTT	NA	False	NA	33	True	AATAAA	-33	NA	150357638	150400307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
WTC11_00071690	chr5	+	905	4	NIC	ENSG00000070814.22	novel	3400	18	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	428.590195356305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	150379295	False	NA	0	True	AGTAAA	-13	NA	150379327	150384249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150379409_150379531_150379733_150383061_150383173_150383737
WTC11_00071695	chr5	+	4367	3	FSM	ENSG00000164591.14	ENST00000521300.1	665	3	-744	-2958	-507	547	multi-exon	FALSE	canonical	3	45	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGCAGTAAGCTGAGAT	150670687	False	NA	NA	False	NA	NA	NA	150670913	150679915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150671909_150672339_150672503_150676706
WTC11_00071697	chr5	+	3483	2	FSM	ENSG00000164591.14	ENST00000520112.1	605	2	283	-3161	283	658	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGCCTGTTTTTGT	150672195	True	NA	NA	False	AATAAA	-39	NA	150672339	150680026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150672503_150676706
WTC11_00071701	chr5	+	480	5	FSM	ENSG00000211445.13	ENST00000521650.5	467	5	-13	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	221.565453083282	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCAGCTCTTTGAGA	151018058	True	NA	NA	False	NA	NA	NA	151020590	151027461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151020742_151020827_151020855_151025339_151025494_151026899_151027018_151027431
WTC11_00071706	chr5	+	6150	2	FSM	ENSG00000196743.9	ENST00000523004.1	643	2	0	-5507	0	2322	multi-exon	FALSE	canonical	3	131	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTGCAGAAGTTTTCA	151259776	True	NA	5	True	AATAAA	-12	NA	151259798	151272762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151259917_151266730
WTC11_00071713	chr5	+	10644	12	FSM	ENSG00000145907.16	ENST00000678964.1	10622	12	-22	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	861.175076506917	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732587	True	NA	NA	False	AATAAA	-28	NA	151771883	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803537
WTC11_00071715	chr5	+	10244	12	FSM	ENSG00000145907.16	ENST00000394123.7	10240	12	-4	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	574.99688824167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732609	True	NA	NA	False	AATAAA	-28	NA	151771905	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
WTC11_00071720	chr5	+	1691	12	FSM	ENSG00000145907.16	ENST00000522761.6	1691	12	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	796.523396179395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGCTCCCTCTCCCTC	151732641	True	NA	40	True	TATAAA	-43	NA	151771937	151804237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772033_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
WTC11_00071723	chr5	+	10243	12	FSM	ENSG00000145907.16	ENST00000356245.8	10227	12	-16	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	286.505361754452	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732641	True	NA	NA	False	AATAAA	-28	NA	151771937	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
WTC11_00071726	chr5	+	8602	3	FSM	ENSG00000145907.16	ENST00000676715.1	8602	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	1371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151800745	False	NA	NA	False	AATAAA	-28	NA	151800759	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151800870_151803884_151803997_151804405
WTC11_00071730	chr5	+	5276	3	NIC	ENSG00000037749.13	novel	4599	4	NA	NA	13	-7	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	41.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTTTCTATAGTGT	154035114	True	NA	21	True	ATTAAA	-24	NA	154039011	154057443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154039303_154049556_154050018_154052919
WTC11_00071735	chr5	+	1306	2	FSM	ENSG00000164576.12	ENST00000519683.1	410	2	-668	-228	-43	228	multi-exon	FALSE	canonical	3	206	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTTTTTAAACCTTGT	154444969	True	NA	NA	False	AATACA	-11	NA	154445953	154451544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154446806_154451090
WTC11_00071740	chr5	+	7229	19	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	127.32067999958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154755212	False	NA	33	True	AATAAA	-18	NA	154755229	154817605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793902_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
WTC11_00071741	chr5	+	7251	19	NNC	ENSG00000155506.19	novel	7181	19	NA	NA	-147	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.262564269304	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154755212	False	NA	33	True	AATAAA	-18	NA	154755229	154817605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_154756192_154790321_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793923_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
WTC11_00071742	chr5	+	7181	19	FSM	ENSG00000155506.19	ENST00000518297.6	7181	19	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_6	91.3366618750058	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154753021	True	NA	33	True	AATAAA	-18	NA	154755376	154817605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
WTC11_00071756	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	133.578212627991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856885	False	NA	14	True	AATAAA	-23	NA	154858516	154876792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
WTC11_00071759	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	50.1431284757277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154855737	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
WTC11_00071764	chr5	+	2548	6	FSM	ENSG00000082515.18	ENST00000265229.12	3035	6	0	487	0	-487	multi-exon	FALSE	canonical	3	87	junction_2	728.753291587764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGTATCTGGTACTAT	154931706	True	NA	NA	False	AAAAAG	-23	NA	154941092	154968924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154941139_154941216_154941266_154956370_154956437_154957134_154957213_154959979_154960050_154966685
WTC11_00071765	chr5	+	786	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	-2	0	0	0	multi-exon	FALSE	canonical	3	1831	junction_1	75.5476008884465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	154931706	True	NA	13	True	AATAAA	-13	NA	154941092	154966966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
WTC11_00071777	chr5	+	2186	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	218	junction_8	16.4936351360153	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	159260735	True	NA	16	True	AATAAA	-16	NA	159263282	159286036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
WTC11_00071782	chr5	+	1466	8	FSM	ENSG00000113312.12	ENST00000522793.5	1432	8	-1	-33	-1	1	multi-exon	FALSE	canonical	3	87	junction_1	237.13037832916	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGTTAGGTTGTGAAT	159996338	True	NA	23	True	AATAAA	-17	NA	160009111	160065544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160009191_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
WTC11_00071785	chr5	+	1454	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	-14	1	0	-1	multi-exon	FALSE	canonical	3	573	junction_1	77.8698547944857	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGGGTTAGGTTGTGA	159996351	True	NA	21	True	AATAAA	-15	NA	160009124	160065542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
WTC11_00071795	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2919	junction_1	673.76001662313	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397282	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
WTC11_00071796	chr5	+	1076	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	-6	0	0	0	multi-exon	FALSE	canonical	3	3751	junction_4	394.274254168339	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397331	True	NA	28	True	AATAAA	-16	NA	160421903	160428739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
WTC11_00071799	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	TRUE	canonical	3	3201	junction_3	162.618162167289	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	163430162	True	NA	15	True	AATAAA	-16	NA	163437594	163445016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
WTC11_00071804	chr5	+	3016	18	FSM	ENSG00000072571.20	ENST00000393915.9	3016	18	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_3	84.2824793903213	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452146	True	NA	17	True	AATAAA	-26	NA	163460631	163491941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
WTC11_00071806	chr5	+	2985	18	NNC	ENSG00000072571.20	novel	2988	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	156.984075625523	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452171	True	NA	17	True	AATAAA	-26	NA	163460656	163491941	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474059_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
WTC11_00071807	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	124.189970564967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452171	True	NA	17	True	AATAAA	-26	NA	163460656	163491941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
WTC11_00071810	chr5	+	2069	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	-5	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	143.033115823652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	163500208	True	NA	36	True	AATAAA	-38	NA	163505613	163519354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
WTC11_00071811	chr5	+	3429	6	FSM	ENSG00000038274.17	ENST00000523606.1	3210	6	-41	-178	1	0	multi-exon	FALSE	canonical	3	352	junction_1	156.076135267375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAATGTTAACTTAC	163500179	True	NA	9	True	AATAAA	-21	NA	163505584	163519327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
WTC11_00071812	chr5	+	3433	5	FSM	ENSG00000038274.17	ENST00000518095.5	3409	5	-24	0	6	0	multi-exon	FALSE	canonical	3	352	junction_1	164.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAATGTTAACTTAC	163500184	True	NA	9	True	AATAAA	-21	NA	163505589	163519327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517
WTC11_00071815	chr5	+	4717	23	FSM	ENSG00000113645.15	ENST00000521089.5	3562	23	-615	-540	-110	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTCCTCTTGCTCTCT	168291456	False	NA	16	True	AATAAA	-16	NA	168291534	168469756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467839_168467965_168468950
WTC11_00071816	chr5	+	7136	23	FSM	ENSG00000113645.15	ENST00000265293.9	7136	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTTTCCA	168289647	True	NA	5	True	AATAAA	-18	NA	168291644	168472303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467839_168467965_168468950
WTC11_00071821	chr5	+	2077	10	FSM	ENSG00000113645.15	ENST00000524038.5	2077	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	28.5657137141714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTGCTCTCTTTT	168430148	False	NA	19	True	AATAAA	-19	NA	168430158	168469759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467842_168467965_168468950
WTC11_00071830	chr5	+	369	4	FSM	ENSG00000040275.17	ENST00000503871.1	369	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	196.845681238432	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAACTCCTCTCTTGTA	169588507	True	NA	NA	False	NA	NA	NA	169588534	169593427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_169588576_169590752_169590830_169591047_169591225_169593353
WTC11_00071839	chr5	+	2674	10	FSM	ENSG00000181163.14	ENST00000678186.1	2674	10	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_7	8325.21084299052	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171387634	False	NA	13	True	AATAAA	-22	NA	171387694	171410884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171406396_171407775_171410526
WTC11_00071840	chr5	+	1266	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	-3	0	3	multi-exon	FALSE	canonical	1	249	junction_1	6784.13505135782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCACGGTTTCTA	171387757	False	NA	5	True	AATAAA	-14	NA	171387798	171410876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071841	chr5	+	1913	12	FSM	ENSG00000181163.14	ENST00000678280.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	7992.31038804443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTGTTGTCCAAAAT	170933660	True	NA	NA	False	GATAAA	-22	NA	171387826	171410706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407162_171407699_171407775_171410526
WTC11_00071842	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_9	6010.28371709689	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	170933660	True	NA	-16	True	AATATA	-6	NA	171387826	171410855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
WTC11_00071843	chr5	+	3606	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	-1	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1218.52367667489	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933660	True	NA	-3	True	AATAAA	-6	NA	171387826	171410868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
WTC11_00071844	chr5	+	1940	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	-4	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1174.33121497691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	170933660	True	NA	-1	True	AATAAA	-8	NA	171387826	171410870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071845	chr5	+	1239	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	-2	0	0	0	multi-exon	FALSE	canonical	3	848	junction_7	6494.67981894545	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	170933660	True	NA	13	True	AATAAA	-22	NA	171387826	171410884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
WTC11_00071846	chr5	+	1362	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	-16	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8314.60587915145	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933660	True	NA	16	True	AATAAA	-25	NA	171387826	171410887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
WTC11_00071847	chr5	+	1345	11	FSM	ENSG00000181163.14	ENST00000296930.10	1320	11	-22	-3	0	3	multi-exon	FALSE	canonical	3	19066	junction_5	1157.54566216629	2516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTGCTTTATACTTT	170933660	True	NA	32	True	AATAAA	-41	NA	171387826	171410903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071848	chr5	+	2508	10	FSM	ENSG00000181163.14	ENST00000677600.1	2506	10	-2	0	0	0	multi-exon	FALSE	canonical	1	249	junction_1	8607.20461927243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
WTC11_00071850	chr5	+	1574	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	-3	0	3	multi-exon	FALSE	canonical	3	19066	junction_4	1073.09750112167	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCACGGTTTCTA	170933685	True	NA	5	True	AATAAA	-14	NA	171387851	171410876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071851	chr5	+	2467	10	FSM	ENSG00000181163.14	ENST00000677741.1	2459	10	-5	-3	0	3	multi-exon	FALSE	canonical	3	19066	junction_4	1161.6792230577	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCACGGTTTCTA	170933685	True	NA	5	True	AATAAA	-14	NA	171387851	171410876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071852	chr5	+	2635	11	FSM	ENSG00000181163.14	ENST00000677672.1	2627	11	-8	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	8280.2979632378	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171388515	False	NA	13	True	AATAAA	-22	NA	171388611	171410884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
WTC11_00071853	chr5	+	1472	10	FSM	ENSG00000181163.14	ENST00000677904.1	1469	10	0	-3	0	3	multi-exon	FALSE	canonical	3	19066	junction_4	1209.13385998326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCACGGTTTCTA	171389620	False	NA	5	True	AATAAA	-14	NA	171389716	171410876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00071854	chr5	+	2534	4	FSM	ENSG00000181163.14	ENST00000677682.1	2534	4	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_2	9260.31666125229	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171399806	False	NA	13	True	AATAAA	-22	NA	171400229	171410884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171400926_171405301_171405404_171406396_171407775_171410526
WTC11_00071860	chr5	+	723	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	509	junction_1	213.674726837052	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	172950044	True	NA	17	True	AATAAA	-17	NA	172959422	172969771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
WTC11_00071861	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	420.340602633415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	172950081	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
WTC11_00071867	chr5	+	1303	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	36	0	36	0	multi-exon	FALSE	canonical	3	19	junction_2	89.5812790462134	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	173143125	True	NA	-11	True	AAGAAA	-34	NA	173144477	173164340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
WTC11_00071871	chr5	+	5176	8	NIC	ENSG00000113742.14	novel	1348	8	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	7.53495256813748	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTAATATACTTATT	173917532	True	NA	9	True	AATAAA	-15	NA	173918210	173960310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_173918255_173932449_173932501_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
WTC11_00071876	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_10	71.5558523113239	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	175468166	True	NA	NA	False	AATAAA	-18	NA	175478559	175529742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
WTC11_00071880	chr5	+	4821	3	FSM	ENSG00000113749.8	ENST00000636584.2	4664	3	-157	0	-116	0	multi-exon	FALSE	canonical	3	37	junction_2	20.5	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTCACGGTTTTATT	175657669	False	NA	18	True	AATAAA	-15	NA	175657913	175710756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175658156_175682708_175684310_175707778
WTC11_00071882	chr5	+	4587	4	FSM	ENSG00000145920.15	ENST00000393745.8	4597	4	10	0	10	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGTCTGTGCTCTTC	175871522	True	NA	5	True	AAAAAG	-14	NA	175871587	175884021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175871706_175878651_175878771_175878907_175879084_175879847
WTC11_00071883	chr5	+	970	4	FSM	ENSG00000145920.15	ENST00000514150.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAATACCTGCCCGGG	175871610	False	NA	NA	False	NA	NA	NA	175871675	175879998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175872200_175878651_175878771_175878907_175879084_175879847
WTC11_00071885	chr5	+	3311	10	FSM	ENSG00000170085.18	ENST00000429602.7	3305	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	63	junction_4	16.2100410887439	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTTCAGTGTGACTC	176237940	True	NA	19	True	AATAAA	-21	NA	176238417	176345989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176238638_176289653_176290956_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
WTC11_00071889	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	176376312	True	NA	21	True	AATAAA	-25	NA	176388750	176389761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176388974_176389330
WTC11_00071891	chr5	+	656	3	FSM	ENSG00000113194.13	ENST00000513627.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	19.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAATTAGCTAGGC	176494006	False	NA	NA	False	NA	NA	NA	176494021	176496986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176494085_176494183_176494276_176496485
WTC11_00071892	chr5	+	2567	9	FSM	ENSG00000048140.18	ENST00000310032.12	2550	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	17	junction_6	99.4469079458984	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGCTACAATAAATGC	176647276	False	NA	-16	True	NA	NA	NA	176647369	176659020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656135_176656699_176656817_176656894_176656957_176657517
WTC11_00071894	chr5	+	2193	7	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	0	-1	combination_of_known_splicesites	TRUE	canonical	2	11	junction_1	117.561922217849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACATGCTACAATAAATG	176643420	True	NA	-17	True	NA	NA	NA	176647466	176659019	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_176647703_176652811_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
WTC11_00071895	chr5	+	2492	9	FSM	ENSG00000048140.18	ENST00000508164.6	2475	9	-17	0	0	0	multi-exon	FALSE	canonical	3	206	junction_8	39.648455203198	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	176643420	True	NA	15	True	AATAAA	-15	NA	176647466	176659051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
WTC11_00071896	chr5	+	2810	4	FSM	ENSG00000048140.18	ENST00000298564.14	2810	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	140.271958075099	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTCTTGCATTTTC	176643420	True	NA	18	True	AATAAA	-18	NA	176647466	176659054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176652742_176652914_176656077_176656126_176656699
WTC11_00071897	chr5	+	3102	8	ISM	ENSG00000048140.18	ENST00000508164.6	2475	9	-97	31	0	0	intron_retention	FALSE	canonical	3	284	junction_1	18.4003105563854	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGCTACAATAAATGC	176647293	False	NA	-16	True	NA	NA	NA	176647386	176659020	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
WTC11_00071898	chr5	+	4445	8	FSM	ENSG00000048140.18	ENST00000514705.5	4445	8	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_7	39.4280538268303	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	176643450	True	NA	17	True	AATAAA	-17	NA	176647496	176659053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
WTC11_00071900	chr5	+	2390	9	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	105.608948484492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGCATGTGTCTTGCAT	176643452	True	NA	14	True	AATAAA	-14	NA	176647498	176659050	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_176647703_176651615_176651667_176651753_176651901_176652811_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
WTC11_00071902	chr5	+	2368	9	FSM	ENSG00000048140.18	ENST00000515708.5	2361	9	-7	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	93.5370915733432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	176643514	False	NA	17	True	AATAAA	-17	NA	176647560	176659053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656925_176657517
WTC11_00071914	chr5	+	3103	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	-10	0	0	0	multi-exon	TRUE	canonical	3	67	junction_1	97.4215326162601	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	177079842	True	NA	34	True	AATAAA	-19	NA	177086904	177098144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
WTC11_00071920	chr5	+	13062	23	FSM	ENSG00000165671.22	ENST00000439151.7	13042	23	-20	0	-15	0	multi-exon	FALSE	canonical	3	96	junction_1	28.2525870972191	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	177129011	True	NA	21	True	AGTAAA	-18	NA	177133752	177300213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
WTC11_00071921	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	177129056	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086
WTC11_00071922	chr5	+	12274	24	FSM	ENSG00000165671.22	ENST00000689345.1	12113	24	-102	-59	0	-3	multi-exon	FALSE	canonical	3	96	junction_1	28.5973943582833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGCCCTTGCCCTGT	177129056	True	NA	18	True	AGTAAA	-15	NA	177133797	177300210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
WTC11_00071927	chr5	+	902	5	FSM	ENSG00000169230.10	ENST00000504594.5	886	5	-16	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2378.67582648414	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTACGTGGTGGGTT	177254492	True	NA	21	True	ATTAAA	-21	NA	177303798	177306669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177304078_177304624_177304851_177305914_177305985_177306097_177306177_177306421
WTC11_00071939	chr5	+	1835	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	378	-298	7	0	3prime_fragment	FALSE	canonical	3	136	junction_2	44.801895903446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366023	True	NA	18	True	NA	NA	NA	177367320	177372596	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
WTC11_00071940	chr5	+	2344	8	FSM	ENSG00000169220.18	ENST00000425155.6	2329	8	-15	0	-3	0	multi-exon	FALSE	canonical	3	159	junction_1	39.2698669335611	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366001	True	NA	18	True	NA	NA	NA	177367298	177372596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
WTC11_00071943	chr5	+	1067	4	FSM	ENSG00000169220.18	ENST00000506944.1	590	4	-47	-430	0	0	multi-exon	FALSE	canonical	3	234	junction_2	20.7257220756131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177370347	True	NA	18	True	NA	NA	NA	177371065	177372596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177371247_177371349_177371397_177371474_177371590_177371872
WTC11_00071944	chr5	+	2743	16	FSM	ENSG00000198055.11	ENST00000528793.5	2571	16	-172	0	-5	0	multi-exon	FALSE	non_canonical	0	0	junction_15	122.277098791593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCCCTTCCTGTGTGCG	177419826	True	NA	NA	False	AATAGA	-20	NA	177426670	177442625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441734
WTC11_00071945	chr5	+	2984	16	FSM	ENSG00000198055.11	ENST00000355472.10	3002	16	-9	27	-9	-27	multi-exon	TRUE	canonical	3	212	junction_15	71.6369240607725	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAATAGTCCGAGCAC	177419822	True	NA	66	True	NA	NA	NA	177426666	177442864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441736
WTC11_00071946	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	24.3441756666536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	177419900	True	NA	19	True	AATAAA	-22	NA	177426744	177436685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
WTC11_00071947	chr5	+	3159	16	FSM	ENSG00000198055.11	ENST00000355958.9	1789	16	-98	-1272	0	0	multi-exon	FALSE	canonical	3	76	junction_15	103.866452716938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCCCTTCCTGTGTGCG	177419900	True	NA	NA	False	AATAGA	-20	NA	177426744	177442625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441244
WTC11_00071957	chr5	+	2654	4	FSM	ENSG00000027847.14	ENST00000505145.1	2653	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	166	junction_2	18.3847763108502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTAAGTGATATCTTC	177603804	False	NA	8	True	AAGAAA	-12	NA	177605789	177610266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177607528_177608538_177608623_177608909_177609015_177609539
WTC11_00071963	chr5	+	6938	5	FSM	ENSG00000145911.6	ENST00000274605.6	5985	5	0	-953	0	953	multi-exon	FALSE	canonical	3	209	junction_1	15.6903632845132	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTACTGTCAATTTTA	178107350	True	NA	22	True	AATAAA	-25	NA	178113531	178127034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178113772_178119553_178119914_178120177_178120700_178121097_178121353_178121473
WTC11_00071964	chr5	+	671	6	FSM	ENSG00000145916.19	ENST00000502814.5	653	6	-18	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	205.053553980418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCAGCAGATCCTGCA	178130970	False	NA	NA	False	NA	NA	NA	178130995	178142908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178133451_178133570_178138107_178138259_178142582_178142729_178142851
WTC11_00071965	chr5	+	759	5	FSM	ENSG00000145916.19	ENST00000512663.5	738	5	-21	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	190.977092867181	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGAGCTGTGCCAGGTAC	178130970	False	NA	NA	False	NA	NA	NA	178130995	178142976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178138107_178138397_178142582_178142729_178142851
WTC11_00071968	chr5	+	4416	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	-508	3	-490	0	multi-exon	FALSE	canonical	3	133	junction_1	99.4024647581739	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	NA	False	NA	4	True	ATTAAA	-15	NA	178130505	178150565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00071969	chr5	+	822	5	FSM	ENSG00000145916.19	ENST00000507457.5	808	5	-14	0	0	0	multi-exon	FALSE	canonical	3	454	junction_2	6.04152298679729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGATTTCAAGCAGCC	178126295	True	NA	NA	False	NA	NA	NA	178131010	178143644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626
WTC11_00071970	chr5	+	1754	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	135.360241805814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTGGCCAACCTTTA	178126313	True	NA	29	True	NA	NA	NA	178131028	178148566	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178131055_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00071971	chr5	+	2377	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-490	-196	intron_retention	FALSE	canonical	3	441	junction_6	14.0870310727436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGACATCCTTCCACCC	NA	False	NA	86	True	NA	NA	NA	178130505	178148344	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00071972	chr5	+	471	4	FSM	ENSG00000145916.19	ENST00000512811.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	210.514185323038	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCTGCGTTGGAGT	178133392	False	NA	NA	False	NA	NA	NA	178138107	178143709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178138259_178142632_178142729_178142851_178142993_178143626
WTC11_00071973	chr5	+	3312	8	FSM	ENSG00000145916.19	ENST00000515360.5	2820	8	-509	17	-509	0	multi-exon	FALSE	canonical	3	441	junction_4	15.6921922610954	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	178140817	False	NA	12	True	NA	NA	NA	178140830	178148549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00071975	chr5	+	1608	7	FSM	ENSG00000197451.12	ENST00000355836.9	1602	7	-6	0	0	0	multi-exon	FALSE	canonical	3	787	junction_6	422.386243725916	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	178102732	True	NA	-5	True	NA	NA	NA	178204532	178211142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
WTC11_00071976	chr5	+	1689	6	FSM	ENSG00000197451.12	ENST00000506259.5	1674	6	-15	0	0	0	multi-exon	FALSE	canonical	3	787	junction_5	455.307544413663	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCCCCAAGCCTGG	178102732	True	NA	2	True	AATAAA	-3	NA	178204532	178211149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
WTC11_00071978	chr5	+	1785	7	FSM	ENSG00000197451.12	ENST00000504898.5	1785	7	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_5	173.722639732292	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	178102770	True	NA	-5	True	NA	NA	NA	178204570	178211142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210131_178210273_178210552
WTC11_00071982	chr5	+	2933	7	NIC	ENSG00000178338.11	novel	2794	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	20.6834609182205	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTACTTGGTCATGAT	NA	False	NA	-16	True	NA	NA	NA	178859945	178888122	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708_178884519_178885613_178885734_178887608
WTC11_00071987	chr5	+	8228	5	FSM	ENSG00000177932.7	ENST00000315475.7	5893	5	-14	-2321	-14	2321	multi-exon	FALSE	canonical	3	38	junction_4	5.1234753829798	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGAAATGTTCTTTCA	179058665	True	NA	6	True	AATAAA	-16	NA	179060358	179086298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179060667_179062014_179062096_179076444_179076572_179077070_179077167_179078682
WTC11_00071990	chr5	+	2108	17	NNC	ENSG00000176783.15	novel	2642	17	NA	NA	2	-830	intron_retention	FALSE	canonical	3	13	junction_16	57.3899762589252	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCCGGGCACGGTGGCT	179559076	True	NA	12	True	AGTAAA	-22	NA	179559742	179608642	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179608489
WTC11_00071991	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_7	26.6398872698441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	179559347	False	NA	3	True	AATAAA	-15	NA	179559691	179610011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
WTC11_00071992	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	49.4023800611807	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179559347	False	NA	4	True	AATAAA	-16	NA	179559691	179610012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
WTC11_00071994	chr5	+	385	4	FSM	ENSG00000250999.2	ENST00000508188.2	666	4	281	0	5	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	179657973	True	NA	NA	False	AATAGA	-18	NA	179658042	179664430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179658098_179658388_179658482_179662974_179663104_179664322
WTC11_00071997	chr5	+	5102	14	FSM	ENSG00000127022.16	ENST00000680614.1	5103	14	1	0	1	0	multi-exon	FALSE	canonical	3	2917	junction_10	221.775861049797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCCTGTTCAAATT	179614254	True	NA	-4	True	CATAAA	-10	NA	179698923	179729954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679
WTC11_00071998	chr5	+	4926	15	FSM	ENSG00000127022.16	ENST00000247461.9	4915	15	-11	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_10	218.091677034766	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	179614286	True	NA	11	True	AATAAA	-23	NA	179698955	179731641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072000	chr5	+	4768	15	FSM	ENSG00000127022.16	ENST00000680894.1	4768	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	877.055498209079	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAAATTTGTTTGAAT	179614253	True	NA	NA	False	AAGAAA	-13	NA	179698922	179731453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726682_179726760_179728590
WTC11_00072001	chr5	+	5524	14	FSM	ENSG00000127022.16	ENST00000679395.1	5525	14	1	0	1	0	multi-exon	FALSE	canonical	3	385	junction_1	814.075989067563	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGAGCCCTAGTAAAA	179614254	True	NA	-10	True	AATAAA	-2	NA	179698923	179731620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072002	chr5	+	5561	14	FSM	ENSG00000127022.16	ENST00000679719.1	5562	14	1	0	1	0	multi-exon	FALSE	canonical	3	2917	junction_9	225.689554804667	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614254	True	NA	-8	True	AATAAA	-4	NA	179698923	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072003	chr5	+	7182	14	FSM	ENSG00000127022.16	ENST00000679523.1	7183	14	1	0	1	0	multi-exon	FALSE	canonical	3	2950	junction_12	195.048560180285	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614254	True	NA	-8	True	AATAAA	-4	NA	179698923	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072004	chr5	+	5042	16	FSM	ENSG00000127022.16	ENST00000680984.1	5030	16	-12	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	1142.06741579568	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614253	True	NA	-8	True	AATAAA	-4	NA	179698922	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179715898_179716001_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072005	chr5	+	4893	15	FSM	ENSG00000127022.16	ENST00000681576.1	4882	15	-11	0	1	0	multi-exon	FALSE	canonical	2	41	junction_6	868.202708978468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614254	True	NA	-8	True	AATAAA	-4	NA	179698923	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709918_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072006	chr5	+	4857	14	FSM	ENSG00000127022.16	ENST00000680985.1	4854	14	-3	0	1	0	multi-exon	FALSE	canonical	1	4	junction_5	900.355360481587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614254	True	NA	-8	True	AATAAA	-4	NA	179698923	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072009	chr5	+	5181	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	-59	-19	-9	0	multi-exon	FALSE	canonical	3	58	junction_1	1115.65559002568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	179698876	False	NA	11	True	AATAAA	-23	NA	179698896	179731641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072010	chr5	+	5183	16	FSM	ENSG00000127022.16	ENST00000513246.6	5162	16	-21	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1105.69273610107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614286	True	NA	-8	True	AATAAA	-4	NA	179698955	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179704154_179704431_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072013	chr5	+	5417	13	FSM	ENSG00000127022.16	ENST00000679527.1	5417	13	0	0	0	0	multi-exon	FALSE	canonical	2	232	junction_3	869.539054135389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGAGCCCTAGTAAAA	179614355	True	NA	-10	True	AATAAA	-2	NA	179699024	179731620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072016	chr5	+	5264	15	FSM	ENSG00000127022.16	ENST00000681076.1	5260	15	-4	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	1161.08369506198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAAATTTGTTTGAAT	179614425	True	NA	NA	False	AAGAAA	-13	NA	179699094	179731453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726682_179726760_179728590
WTC11_00072017	chr5	+	5436	15	FSM	ENSG00000127022.16	ENST00000680013.1	5436	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	845.264600523386	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614425	True	NA	-8	True	AATAAA	-4	NA	179699094	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00072025	chr5	+	2253	7	FSM	ENSG00000161011.20	ENST00000360718.5	2253	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	135.114766032436	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	179820403	False	NA	33	True	ATTAAA	-23	NA	179822484	179837255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
WTC11_00072027	chr5	+	6238	12	FSM	ENSG00000113300.13	ENST00000261951.9	6219	12	-19	0	-19	0	multi-exon	FALSE	canonical	3	173	junction_5	23.583857765587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTGGGGTTATAAT	180485818	True	NA	-27	True	AATAAA	-23	NA	180494359	180578358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
WTC11_00072029	chr5	+	6162	12	NIC	ENSG00000113300.13	novel	6250	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	77	junction_5	44.1698449919351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCAAACATTGTGTTGG	180485870	True	NA	-36	True	AATAAA	-14	NA	180494411	180578349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564579_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
WTC11_00072030	chr5	+	2217	10	ISM	ENSG00000113300.13	ENST00000261951.9	6219	12	-11	8457	-11	1933	5prime_fragment	FALSE	canonical	3	173	junction_5	23.099355984823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGCCCTTGTAATA	180485826	True	NA	NA	False	AATACA	-44	NA	180494367	180569901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109
WTC11_00072031	chr5	+	6250	13	FSM	ENSG00000113300.13	ENST00000618123.4	6250	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	80.5024154226995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCAAACATTGTGTTGG	180485965	False	NA	-36	True	AATAAA	-14	NA	180494506	180578349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_180494764_180495420_180495589_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
WTC11_00072036	chr5	+	3074	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	-380	2	-371	0	multi-exon	FALSE	canonical	3	9	junction_6	6.80036013452109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	NA	False	NA	7	True	AATAAA	-17	NA	181222909	181235806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
WTC11_00072037	chr5	+	4014	6	FSM	ENSG00000146063.20	ENST00000315073.10	3645	6	-371	2	-371	0	multi-exon	FALSE	canonical	3	14	junction_4	5.67802782663136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	NA	False	NA	7	True	AATAAA	-17	NA	181222909	181235806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173
WTC11_00072038	chr5	+	3856	5	FSM	ENSG00000146063.20	ENST00000508930.1	3834	5	-22	0	-13	0	multi-exon	FALSE	canonical	3	15	junction_3	4.81534007106456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	181220834	True	NA	7	True	AATAAA	-17	NA	181223267	181235806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233764_181234173
WTC11_00072043	chr5	+	447	2	FSM	ENSG00000248103.1	ENST00000412295.2	549	2	-3	105	-3	-105	multi-exon	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTAGGTGCATGGAGGG	181277823	True	NA	NA	False	NA	NA	NA	181281371	181283547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181281613_181283341
WTC11_00072045	chr5	+	3993	10	Fusion	ENSG00000238035.8_ENSG00000248103.1_ENSG00000250765.6_ENSG00000274525.1	novel	246	3	NA	NA	-3	-5867	intron_retention	TRUE	canonical	3	10	junction_4	44.3097960353166	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTATTTACCTTTACC	181277823	True	NA	NA	False	AATAAA	-44	NA	181281371	181336346	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_181281613_181283341_181283504_181291672_181291739_181293894_181293952_181295046_181295574_181301179_181301262_181304174_181304240_181313828_181313953_181317330_181317396_181333742
WTC11_00072046	chr5	+	4522	8	NNC	ENSG00000238035.8	novel	992	8	NA	NA	4447	3366	at_least_one_novel_splicesite	TRUE	canonical	2	18	junction_7	38.1570332137271	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTTGATAGGTAATT	NA	False	NA	NA	False	TATAAA	-41	NA	181310948	181328051	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_181311073_181313828_181313953_181317330_181317396_181320494_181320553_181321651_181321843_181323901_181323960_181324052_181326602_181326698
WTC11_00072047	chr5	-	9278	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	5	0	-5	multi-exon	FALSE	canonical	3	233	junction_1	2.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTTGTGTCTTACTT	-216444	True	NA	NA	False	NA	NA	NA	218153	196872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_205959_216728_216860_218092
WTC11_00072048	chr5	-	1971	3	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGAGCTCACACGGTA	-262726	False	NA	NA	False	NA	NA	NA	262751	260203	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_260840_261191_261672_261896
WTC11_00072050	chr5	-	2583	1	ISM	ENSG00000066230.12	ENST00000264938.8	5555	17	51357	54	9552	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGCAAACTTTGTT	-472379	True	NA	0	True	ATTAAA	-15	NA	473092	470509	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_470500_473100
WTC11_00072051	chr5	-	467	2	FSM	ENSG00000188818.13	ENST00000505815.1	489	2	22	0	22	0	multi-exon	FALSE	canonical	1	1	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGCTGGCAGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	843724	841577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_841920_843599
WTC11_00072052	chr5	-	2211	6	FSM	ENSG00000028310.18	ENST00000483234.5	2211	6	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	18.2756668824971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-879303	False	NA	-34	True	CATAAA	-17	NA	879315	863740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354
WTC11_00072053	chr5	-	2665	16	FSM	ENSG00000028310.18	ENST00000467963.6	2665	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	56.2267631016484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-887714	True	NA	-34	True	CATAAA	-17	NA	892801	863740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
WTC11_00072054	chr5	-	2661	16	NNC	ENSG00000028310.18	novel	2843	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	64.4362216976342	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-887713	True	NA	-34	True	CATAAA	-17	NA	892800	863740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886705_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
WTC11_00072055	chr5	-	2843	16	FSM	ENSG00000028310.18	ENST00000495265.5	2843	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.9676538835479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-887713	True	NA	-34	True	CATAAA	-17	NA	892800	863740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892605
WTC11_00072056	chr5	-	861	7	FSM	ENSG00000028310.18	ENST00000519112.5	861	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.299994621921	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGTGTAGAGTTTTT	-878475	False	NA	NA	False	NA	NA	NA	878487	864422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_869244_869405_870472_870576_871525_871565_876100_876213_878354
WTC11_00072057	chr5	-	5321	25	NNC	ENSG00000113504.21	novel	5300	24	NA	NA	0	29714	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4514552083432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCAACACGTGGTCAG	NA	False	NA	NA	False	AATAAA	-44	NA	1112063	1020669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1020691_1050383_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
WTC11_00072058	chr5	-	5303	24	FSM	ENSG00000113504.21	ENST00000264930.10	5300	24	0	-3	0	3	multi-exon	FALSE	non_canonical	3	65	junction_21	13.9832467948712	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGAAGAATCTCTTGAGT	NA	False	NA	-8	True	AATAAA	-20	NA	1112063	1050380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
WTC11_00072062	chr5	-	4039	16	FSM	ENSG00000164362.21	ENST00000310581.10	4039	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	18.9483508517232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-1293650	True	NA	-17	True	AGTAAA	-37	NA	1295068	1253166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1293312_1294667_1294770
WTC11_00072063	chr5	-	4300	13	NIC	ENSG00000164362.21	novel	5289	17	NA	NA	4	-6	intron_retention	FALSE	canonical	3	14	junction_12	30.3296701084745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTCATGTTTGAAT	-1293646	True	NA	-23	True	AGTAAA	-31	NA	1295064	1253172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1292963
WTC11_00072066	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_10	83.1026990762033	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	NA	False	NA	-15	True	ATTAAA	-20	NA	1345099	1317751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
WTC11_00072067	chr5	-	3540	8	FSM	ENSG00000049656.14	ENST00000503042.5	3540	8	0	0	0	0	multi-exon	FALSE	canonical	3	1118	junction_7	60.0968605923905	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTTGACCTGGTATA	-1331817	False	NA	-11	True	AATAAA	-17	NA	1331844	1317867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1325817_1330279
WTC11_00072071	chr5	-	704	5	FSM	ENSG00000049656.14	ENST00000511268.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	1170	junction_3	39.6382075780427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGGAGCTCACTCACC	-1323806	True	NA	NA	False	NA	NA	NA	1323830	1320207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786
WTC11_00072078	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	61.8664337205708	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-1514031	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
WTC11_00072079	chr5	-	547	6	FSM	ENSG00000153395.10	ENST00000513757.5	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_3	49.2690572266204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCCTCTGGTTGCTTT	-1494669	True	NA	NA	False	NA	NA	NA	1494778	1479475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699
WTC11_00072081	chr5	-	400	3	FSM	ENSG00000153395.10	ENST00000507282.1	417	3	14	3	14	-3	multi-exon	FALSE	canonical	3	885	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAATGTTTATTTTTCT	-1494814	False	NA	NA	False	NA	NA	NA	1494914	1488379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1488452_1489745_1489859_1494699
WTC11_00072082	chr5	-	4222	1	Genic_Genomic	ENSG00000185986.13	novel	NA	NA	NA	NA	21575	2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTCTATACTTTGTC	NA	False	NA	-13	True	NA	NA	NA	1571714	1567492	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_1567500_1571700
WTC11_00072083	chr5	-	3564	8	NNC	ENSG00000185986.13	novel	1332	8	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	41.9888226137599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591292	True	NA	NA	False	AATAAA	-16	NA	1594523	1571956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1581696_1584983_1585134_1589246_1589366_1593112_1593285_1594394
WTC11_00072085	chr5	-	2205	8	FSM	ENSG00000188002.11	ENST00000512335.5	2231	8	26	0	3	0	multi-exon	FALSE	canonical	2	5	junction_3	41.2236310276283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-1632239	True	NA	4	True	ATTAAA	-20	NA	1633978	1598919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1626785_1626927_1628754_1629631_1630408_1630567_1632643_1632907_1633807
WTC11_00072086	chr5	-	2307	7	FSM	ENSG00000188002.11	ENST00000507841.5	2338	7	27	4	3	-4	multi-exon	FALSE	canonical	3	5	junction_2	43.9725293033427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGTTTTCTTTTTTT	-1632239	True	NA	0	True	ATTAAA	-16	NA	1633978	1598923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599828_1602690_1602736_1626785_1626927_1628754_1629631_1632643_1632752_1632844_1632907_1633807
WTC11_00072087	chr5	-	985	4	FSM	ENSG00000188002.11	ENST00000507505.5	1009	4	24	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	50.0199960015992	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACTCACTCCTC	-1632239	True	NA	NA	False	NA	NA	NA	1633978	1599120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599828_1602690_1602736_1632844_1632907_1633807
WTC11_00072088	chr5	-	1507	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	67	10	1	0	multi-exon	FALSE	canonical	3	70	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGTTTTTTGTTTGT	-1632203	True	NA	-11	True	TTTAAA	-35	NA	1633942	1628521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1632643_1632907_1633807
WTC11_00072089	chr5	-	1135	5	FSM	ENSG00000188002.11	ENST00000343123.5	1436	5	0	301	0	-301	multi-exon	FALSE	canonical	2	14	junction_1	46.0563513535321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATTGGGCTTCTGTTT	-1632245	True	NA	NA	False	NA	NA	NA	1633984	1629000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1630408_1630567_1632643_1632752_1632844_1632907_1633807
WTC11_00072090	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-1789343	True	NA	-4	True	ATTAAA	-17	NA	1799837	1798384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1798948_1799791
WTC11_00072091	chr5	-	688	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	-2	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-1799869	False	NA	-4	True	ATTAAA	-17	NA	1799895	1798384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1798948_1799770
WTC11_00072092	chr5	-	2394	5	FSM	ENSG00000113430.10	ENST00000231357.7	2394	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.5531361684298	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	-1882906	False	NA	12	True	AATAAA	-29	NA	1882925	1877412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602
WTC11_00072093	chr5	-	2415	7	FSM	ENSG00000113430.10	ENST00000613726.4	2403	7	0	-12	0	-2	multi-exon	FALSE	canonical	3	8	junction_3	18.9560896108172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAACACATTTAAAACCA	-1886782	True	NA	10	True	AATAAA	-27	NA	1886984	1877414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1878793_1879503_1879833_1880065_1880144_1880724_1880835_1881807_1882060_1882602_1882748_1886861
WTC11_00072098	chr5	-	2688	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	-58	0	-43	0	multi-exon	FALSE	canonical	3	51	junction_1	37.4391172438667	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-2751704	False	NA	-8	True	AATAAA	-17	NA	2751720	2745844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
WTC11_00072099	chr5	-	3079	4	FSM	ENSG00000170561.13	ENST00000302057.6	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	17.5689119374726	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	-2748084	True	NA	77	True	AATAAA	-21	NA	2751677	2746164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_2747617_2748344_2749053_2749381_2749788_2751164
WTC11_00072100	chr5	-	5854	3	FSM	ENSG00000250579.3	ENST00000654665.1	5854	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138440	False	NA	-39	True	AATAAA	-4	NA	5138455	5132100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_5133233_5133636_5133771_5133867
WTC11_00072102	chr5	-	2470	4	FSM	ENSG00000250579.3	ENST00000656100.1	2278	4	-192	0	34	0	multi-exon	FALSE	canonical	3	7	junction_3	50.6052259049289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138955	True	NA	-39	True	AATAAA	-4	NA	5140119	5132100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139118
WTC11_00072103	chr5	-	1076	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	25	0	-25	multi-exon	FALSE	canonical	3	425	junction_3	6.94422221866655	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGTCTTGTAAACA	-6372229	True	NA	16	True	AATAAA	-44	NA	6378547	6371898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
WTC11_00072105	chr5	-	3800	13	FSM	ENSG00000037474.15	ENST00000505892.5	3558	13	-237	-5	-237	3	multi-exon	FALSE	canonical	3	742	junction_1	46.3922736622765	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGATTCCTGTTTTTG	-6621706	False	NA	39	True	AATAAA	-18	NA	6621726	6599235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105
WTC11_00072106	chr5	-	3059	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	-3	0	3	multi-exon	FALSE	canonical	3	633	junction_17	62.5707500788675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGATTCCTGTTTTTG	-6614550	True	NA	39	True	AATAAA	-18	NA	6633044	6599235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
WTC11_00072112	chr5	-	499	4	Antisense	novelGene_ENSG00000078295.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCCCTTGTATTGATA	NA	False	NA	NA	False	NA	NA	NA	7396369	7393713	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_7393975_7394075_7394149_7394529_7394655_7396329
WTC11_00072113	chr5	-	2021	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	7	0	7	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCATTTACTTTCAG	-7851033	True	NA	NA	False	AATAAA	-17	NA	7851126	7830377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7832030_7835381_7835499_7850874
WTC11_00072114	chr5	-	2321	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_6	40.2012299424892	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867729	True	NA	-9	True	AATAAA	-16	NA	7869010	7859158	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
WTC11_00072116	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	35.0460015154685	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867750	True	NA	-9	True	AATAAA	-16	NA	7869031	7859158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
WTC11_00072122	chr5	-	2775	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	-37	-87	-28	87	multi-exon	FALSE	canonical	3	22	junction_1	12.3161479367536	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAGCAACTTTGGAAC	-10249913	False	NA	84	True	AGTAAA	-31	NA	10249925	10225419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
WTC11_00072123	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1903515328563	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-10249885	False	NA	NA	False	NA	NA	NA	10249897	10226955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
WTC11_00072124	chr5	-	571	4	FSM	ENSG00000150756.14	ENST00000504390.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.6015872373189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACGTCACGGGGGAGGG	-10248899	True	NA	NA	False	NA	NA	NA	10249885	10227557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10227648_10236477_10236616_10239041_10239357_10249857
WTC11_00072125	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	21.7678662252413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-10304084	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
WTC11_00072127	chr5	-	1535	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	-29	-605	-29	605	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGACCCTCGGAGCTGC	-10353219	True	NA	NA	False	AAGAAA	-45	NA	10353630	10352095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10352100_10353600
WTC11_00072128	chr5	-	261	1	FSM	ENSG00000251548.1	ENST00000504159.1	619	1	239	119	239	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATCATCAACATCCTCAA	NA	False	NA	NA	False	NA	NA	NA	10664874	10664613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10664600_10664900
WTC11_00072129	chr5	-	2450	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	-152	3	-152	-3	multi-exon	FALSE	canonical	3	420	junction_3	27.0102861065105	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-17	NA	10761386	10679232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
WTC11_00072130	chr5	-	1048	3	FSM	ENSG00000112977.16	ENST00000432074.2	1048	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGGCTGGAGACAGG	-10756585	True	NA	NA	False	NA	NA	NA	10761228	10680433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10681170_10748174_10748272_10761013
WTC11_00072132	chr5	-	5888	22	FSM	ENSG00000169862.20	ENST00000304623.13	5888	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	5.58342217413328	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGCCATCGTCCTTTA	-11904156	True	NA	NA	False	AATAAA	-21	NA	11904446	10971835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11384664_11385230_11397030_11397204_11411535_11411653_11412034_11412070_11564943_11565057_11732135_11732273_11903816
WTC11_00072133	chr5	-	6558	3	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	172	junction_2	36.5	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTAATTGAGCAATATA	-12650331	True	NA	NA	False	NA	NA	NA	12667998	12654800	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12665722_12666011_12667735
WTC11_00072134	chr5	-	917	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	968	junction_1	0	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAACAGAGTGTGGCCTG	-12650331	True	NA	-22	True	AATAAA	-20	NA	12667998	12660153	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12667735
WTC11_00072135	chr5	-	2645	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACCTGACGCATACACT	-12650331	True	NA	NA	False	NA	NA	NA	12667998	12664519	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12666902_12667735
WTC11_00072136	chr5	-	250	1	FSM	ENSG00000250526.1	ENST00000507234.1	1593	1	1358	-15	1358	15	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTATCTGAATCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	14639660	14639410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14639400_14639700
WTC11_00072137	chr5	-	1763	1	FSM	ENSG00000250182.3	ENST00000503537.1	1389	1	-63	-311	-63	311	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGTAAAATTATAG	-14653111	True	NA	NA	False	ATTAAA	-30	NA	14653392	14651629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14651600_14653400
WTC11_00072138	chr5	-	8220	12	FSM	ENSG00000154122.14	ENST00000284268.8	8207	12	0	-13	0	13	multi-exon	FALSE	canonical	3	29	junction_11	7.90229593167299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTTTTTTTTATTC	-14871401	True	NA	NA	False	AGTAAA	-39	NA	14871778	14704786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14711311_14712873_14712974_14713543_14713668_14716705_14716836_14741826_14741923_14745869_14745963_14749171_14749307_14751068_14751240_14755860_14755945_14758479_14758599_14768974_14769192_14871351
WTC11_00072141	chr5	-	1084	1	FSM	ENSG00000249485.1	ENST00000502424.1	1276	1	59	133	59	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCCCAGTGAACCTTG	NA	False	NA	NA	False	NA	NA	NA	14798341	14797257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14797300_14798300
WTC11_00072142	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	28.7930547181087	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	-16460088	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
WTC11_00072143	chr5	-	3587	9	FSM	ENSG00000154153.15	ENST00000306320.10	3208	9	29	-408	0	393	multi-exon	FALSE	canonical	3	10	junction_6	3.35410196624968	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTTTCTCACAACTAT	-16616955	False	NA	NA	False	AATACA	-5	NA	16616968	16472644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16475235_16477661_16477789_16478033_16478099_16478849_16478988_16481008_16481094_16483345_16483473_16565762_16565794_16571995_16572103_16616651
WTC11_00072147	chr5	-	7589	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.194010415709	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16738465	False	NA	NA	False	AATAAA	-17	NA	16738631	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663360_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
WTC11_00072149	chr5	-	9474	42	NNC	ENSG00000145555.15	novel	11442	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.789534914273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16934055	True	NA	NA	False	AATAAA	-17	NA	16936259	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663363_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
WTC11_00072150	chr5	-	11442	41	FSM	ENSG00000145555.15	ENST00000513610.6	11442	41	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	152.952116690159	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16934084	True	NA	NA	False	AATAAA	-17	NA	16936288	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
WTC11_00072152	chr5	-	4803	23	FSM	ENSG00000145555.15	ENST00000505695.5	4803	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	107.425738332107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGTGTCTCCGAGGATC	-16742062	True	NA	NA	False	AAAACA	-42	NA	16742228	16666561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
WTC11_00072155	chr5	-	1677	4	FSM	ENSG00000145555.15	ENST00000507288.1	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	32.4995726467629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCATTAGTTTTCTT	-16934055	True	NA	1	True	AATAAA	-21	NA	16936259	16814516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16815464_16818008_16818168_16877608_16877708_16935787
WTC11_00072157	chr5	-	13201	2	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	217	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-18665565	False	NA	NA	False	AATAGA	-41	NA	18665638	18646653	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323
WTC11_00072158	chr5	-	7004	3	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_2	79.5	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACCCACACACACAT	-18674171	True	NA	-68	True	NA	NA	NA	18674244	18653849	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18672041
WTC11_00072159	chr5	-	5176	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	10473	2947	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTAACAACTTGTAAAT	-25435423	False	NA	NA	False	AATACA	-40	NA	25435434	25410491	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25433611
WTC11_00072162	chr5	-	5308	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	-3	0	0	multi-exon	FALSE	canonical	3	86	junction_34	76.3270882089948	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-31522525	True	NA	NA	False	AATAAA	-25	NA	31532061	31400493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
WTC11_00072164	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_30	67.6136443179865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-31522557	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
WTC11_00072166	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_29	71.9992610977079	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-31522573	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
WTC11_00072167	chr5	-	5319	35	NIC	ENSG00000113360.17	novel	5416	36	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_30	77.677400488899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTGTTTCATTCATCA	-31522557	True	NA	NA	False	AATAAA	-21	NA	31532093	31400497	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
WTC11_00072170	chr5	-	498	1	FSM	ENSG00000224282.3	ENST00000463864.1	576	1	-16	94	-16	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAAGCCACAAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	31823152	31822654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31822700_31823200
WTC11_00072171	chr5	-	3477	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	-749	-1654	-732	3	multi-exon	FALSE	canonical	3	108	junction_3	345.460401332611	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGCATGTCATTTGTG	NA	False	NA	-8	True	AATAAA	-31	NA	32175051	32124712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
WTC11_00072172	chr5	-	2690	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	-12	0	12	multi-exon	FALSE	canonical	3	814	junction_2	33.436506994601	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTTGTGTTTTTGTAT	-32166735	True	NA	1	True	AATAAA	-40	NA	32174319	32124703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
WTC11_00072175	chr5	-	5123	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	-7	0	-6	multi-exon	FALSE	canonical	3	191	junction_1	18.1365193279563	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGGTTGGTATAAC	-32307903	True	NA	1	True	ATTAAA	-25	NA	32312939	32226999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
WTC11_00072179	chr5	-	671	5	FSM	ENSG00000150712.11	ENST00000505419.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	87.7962840899317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATATCTTCTGGGTTCT	-32307951	True	NA	NA	False	AATACA	-2	NA	32312987	32268700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32312757
WTC11_00072180	chr5	-	4729	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	-12	0	12	multi-exon	TRUE	canonical	3	546	junction_16	63.6680275219192	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTATTCCTGACAAAT	-32427933	True	NA	1	True	AGTAAA	-29	NA	32444740	32354337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
WTC11_00072181	chr5	-	1140	8	FSM	ENSG00000056097.16	ENST00000507465.1	1140	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	234.64075885124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAACCAAGTTTTTCTA	-32390270	False	41	NA	False	TTTAAA	-10	NA	32390317	32355647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32385507_32385650_32387548_32387700_32388468_32388675_32390274
WTC11_00072182	chr5	-	843	2	FSM	ENSG00000056097.16	ENST00000505204.1	552	2	4	-295	4	295	multi-exon	FALSE	canonical	3	631	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTGCTAAAAATACAAAAA	-32444447	False	NA	NA	False	NA	NA	NA	32444492	32419524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32420104_32444228
WTC11_00072183	chr5	-	3963	2	ISM	ENSG00000151388.11	ENST00000504830.6	8572	24	357022	5	89383	-5	3prime_fragment	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTGATGTTTCTGTGT	NA	False	NA	-7	True	AATAAA	-8	NA	33534968	33523539	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_33527367_33534832
WTC11_00072184	chr5	-	1467	6	ISM	ENSG00000151388.11	ENST00000352040.7	4622	22	-420	134813	-342	-58552	5prime_fragment	FALSE	canonical	3	5	junction_2	11.4786758818254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAGTGGCAGAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	33892361	33661993	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_33662041_33683017_33683102_33683858_33684056_33751403_33751549_33881118_33881481_33891729
WTC11_00072185	chr5	-	1174	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	-129	-42	-129	42	multi-exon	FALSE	canonical	3	27	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTTTGCCACATTAAT	NA	False	NA	NA	False	AATAAA	-1	NA	33892148	33751155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33751549_33881118_33881481_33891729
WTC11_00072186	chr5	-	4096	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	12	0	-12	multi-exon	FALSE	canonical	3	80	junction_4	4.20565096031518	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGAAAAGATATCAATT	-34007026	True	NA	NA	False	AGTAAA	-28	NA	34008050	33986176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
WTC11_00072187	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.355662392986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	-34007007	True	NA	NA	False	AATAAA	-20	NA	34008031	33987173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
WTC11_00072188	chr5	-	1235	3	FSM	ENSG00000082196.21	ENST00000513471.5	1393	3	166	-8	166	0	multi-exon	FALSE	canonical	3	8	junction_1	1.5	4698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTAAACTTGTGTTTA	NA	False	NA	-6	True	AATAAA	-19	NA	34028842	34019696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34020743_34023908_34024009_34028753
WTC11_00072189	chr5	-	5243	7	NNC	ENSG00000215158.9	novel	5001	6	NA	NA	-109	79817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.1609575646365	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGGCAACAAAAGCCAAA	NA	False	NA	NA	False	ACTAAA	-11	NA	34218452	34084880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_34085011_34164700_34169154_34175444_34175538_34175821_34175958_34179012_34179098_34182679_34182868_34218294
WTC11_00072190	chr5	-	436	1	FSM	ENSG00000278900.1	ENST00000624218.1	587	1	17	134	17	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGGGATTTAATGTA	NA	False	NA	NA	False	NA	NA	NA	34106319	34105883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34105900_34106300
WTC11_00072191	chr5	-	458	4	FSM	ENSG00000215158.9	ENST00000507274.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.9938250421547	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	NA	False	NA	NA	False	NA	NA	NA	34218343	34175821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34175958_34179012_34179098_34182679_34182868_34218294
WTC11_00072192	chr5	-	702	1	FSM	ENSG00000271874.1	ENST00000606491.1	432	1	-412	142	-412	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCAGGCTGCCTGTAT	-34652287	False	NA	NA	False	NA	NA	NA	34652300	34651598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34651600_34652300
WTC11_00072193	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	54.2217668469038	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	-34912721	True	NA	2	True	AATAAA	-21	NA	34915504	34905259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
WTC11_00072194	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	102.255806681088	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-34912765	True	NA	-8	True	AATAAA	-19	NA	34915548	34908553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
WTC11_00072195	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	126.799601296254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	-34912832	True	NA	-109	True	NA	NA	NA	34915615	34908654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
WTC11_00072198	chr5	-	4386	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	532	0	-532	multi-exon	FALSE	canonical	2	3	junction_3	4.72581562625261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTGAAATAATATTCAGC	-35991257	True	NA	NA	False	ATTAAA	-30	NA	35991390	35951537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
WTC11_00072199	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	17.8271017149607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	-36065542	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
WTC11_00072200	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	53.3389163744447	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	-36065542	True	NA	-97	True	NA	NA	NA	36066882	36035336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
WTC11_00072201	chr5	-	1097	3	ISM	ENSG00000168671.10	ENST00000513300.5	1924	6	16	13273	16	707	5prime_fragment	FALSE	canonical	3	17	junction_2	73	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCATTTTTTGTTTGCA	-36065526	True	NA	-25	True	GATAAA	-17	NA	36066866	36048609	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_36049421_36051869_36051985_36066695
WTC11_00072202	chr5	-	1216	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	421	-727	19	727	3prime_fragment	FALSE	canonical	3	160	junction_2	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	-36065523	True	NA	-5	True	ATTAAA	-20	NA	36066863	36048589	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
WTC11_00072203	chr5	-	8111	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	5	0	-5	multi-exon	FALSE	canonical	3	15	junction_17	5.61572187522947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACTTTTTCTTATGTTT	-36150986	True	NA	-4	True	AATAAA	-21	NA	36151887	36098411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
WTC11_00072204	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	16.0361162627797	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-36241704	False	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
WTC11_00072205	chr5	-	3335	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	-828	0	0	multi-exon	FALSE	canonical	3	25	junction_11	26.2480223576168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTTTTTAACATTTC	-36241921	True	NA	-22	True	AATAAA	-16	NA	36242142	36192884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
WTC11_00072207	chr5	-	5321	1	FSM	ENSG00000285967.1	ENST00000649921.1	5337	1	21	-5	21	5	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTATTTCTTCCCA	-36876387	True	NA	NA	False	AATAAA	-19	NA	36876679	36871358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36871400_36876700
WTC11_00072208	chr5	-	653	3	FSM	ENSG00000197603.16	ENST00000675149.1	3478	3	0	2825	0	-2825	multi-exon	FALSE	canonical	2	4	junction_1	2	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGAAAAACTGCTATAG	NA	False	NA	NA	False	AAGAAA	-7	NA	37169143	37165538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37165672_37167046_37167214_37168790
WTC11_00072210	chr5	-	2293	1	FSM	ENSG00000270558.1	ENST00000603896.1	529	1	-1751	-13	-1751	13	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAAAGTAGTTCGGGT	-37288707	False	NA	-10	True	AATAAA	-20	NA	37288728	37286435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37286400_37288700
WTC11_00072212	chr5	-	4200	35	FSM	ENSG00000113569.16	ENST00000381843.6	4200	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_34	55.3968460621471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGTGTTCTAAATCT	-37355086	False	NA	-34	True	AATAAA	-18	NA	37370785	37291838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370665
WTC11_00072213	chr5	-	4088	34	FSM	ENSG00000113569.16	ENST00000513532.1	4088	34	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_12	57.8451115736328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGATATACTTTCAT	-37355382	True	NA	-95	True	TTTAAA	-34	NA	37371081	37291899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
WTC11_00072218	chr5	-	9534	38	FSM	ENSG00000164327.13	ENST00000357387.8	9533	38	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_10	6.29050788158852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTGTTTTATTTGA	-39071448	True	NA	1	True	AATAAA	-22	NA	39074399	38937918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38942379_38942832_38942972_38944445_38944570_38944912_38945069_38945490_38945725_38946467_38946553_38947263_38947442_38949711_38950721_38952195_38952426_38952984_38953092_38953460_38953554_38954773_38954862_38955594_38955705_38957651_38957731_38958442_38958520_38958666_38958832_38959194_38959322_38959778_38959979_38960397_38960534_38962314_38962362_38962484_38962587_38962875_38963042_38964791_38964893_38966640_38966722_38967160_38967228_38967336_38967428_38967942_38968031_38971876_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
WTC11_00072219	chr5	-	7505	39	FSM	ENSG00000164327.13	ENST00000296782.9	7505	39	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	7.60102777712975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACGCTTAAATTTATAG	-39071448	True	NA	NA	False	ACTAAA	-12	NA	39074399	38940019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38942379_38942832_38942972_38944445_38944570_38944912_38945069_38945490_38945725_38946467_38946553_38947263_38947442_38949355_38949428_38949711_38950721_38952195_38952426_38952984_38953092_38953460_38953554_38954773_38954862_38955594_38955705_38957651_38957731_38958442_38958520_38958666_38958832_38959194_38959322_38959778_38959979_38960397_38960534_38962314_38962362_38962484_38962587_38962875_38963042_38964791_38964893_38966640_38966722_38967160_38967228_38967336_38967428_38967942_38968031_38971876_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
WTC11_00072220	chr5	-	4568	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	-226	3	27	-2	multi-exon	FALSE	canonical	3	20	junction_12	9.18544767442457	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGTGGTACCATCGG	NA	False	NA	-2	True	AATAAA	-40	NA	39425206	39371679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
WTC11_00072223	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	104	junction_7	17.1496173426698	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	-40798187	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
WTC11_00072224	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	51.8925765998648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	NA	False	NA	-8	True	AATAAA	-8	NA	40798374	40762769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
WTC11_00072227	chr5	-	1859	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	-1026	-165	-811	165	multi-exon	FALSE	canonical	3	168	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTGCTAGTAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	40799185	40776850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40777587_40798062
WTC11_00072231	chr5	-	7578	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	-5	0	5	multi-exon	FALSE	canonical	3	8653	junction_3	1841.34859998499	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGCAAATTTGTCT	-40714343	True	NA	NA	False	AATAAA	-23	NA	40835222	40825256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
WTC11_00072233	chr5	-	3295	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	-1	0	1	multi-exon	FALSE	canonical	3	162	junction_8	14.5021550122732	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGACTGTCCTTTA	-41866648	True	NA	-3	True	AATAAA	-19	NA	41870425	41730063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
WTC11_00072235	chr5	-	241	4	FSM	ENSG00000083720.13	ENST00000514723.1	241	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	86.5653253650418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAAATCATGGAGAAA	-41842738	True	NA	NA	False	TTTAAA	-12	NA	41842757	41749600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_41749608_41762110_41762201_41840450_41840512_41842674
WTC11_00072236	chr5	-	247	1	Genic_Genomic	ENSG00000248873.1	novel	NA	NA	NA	NA	3225	3	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTCAATCCCTTTATA	NA	False	NA	NA	False	NA	NA	NA	42465643	42465396	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_42465400_42465600
WTC11_00072237	chr5	-	4178	4	FSM	ENSG00000250722.6	ENST00000512980.5	4175	4	0	-3	0	0	multi-exon	FALSE	canonical	3	108	junction_1	42.8200368467328	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-42811604	True	NA	1	True	AATAAA	-24	NA	42811892	42799879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_42801332_42804655_42807109_42808150_42808367_42811835
WTC11_00072238	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.1154583670684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-42811604	True	NA	1	True	AATAAA	-24	NA	42811892	42799879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
WTC11_00072240	chr5	-	331	1	Genic_Genomic	ENSG00000177738.5	novel	NA	NA	NA	NA	-78	-2505	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCGGCGACCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	43018889	43018558	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_43018600_43018900
WTC11_00072243	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	38.4682007525151	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	-43313499	False	NA	-11	True	AATAAA	-20	NA	43313512	43289394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
WTC11_00072247	chr5	-	2682	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	54	0	-54	multi-exon	FALSE	canonical	3	58	junction_2	10	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGTCTTAAAAAATAAA	-43482526	True	NA	NA	False	NA	NA	NA	43483865	43444305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43446558_43453657_43454044_43483821
WTC11_00072248	chr5	-	2842	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	-360	intron_retention	FALSE	canonical	2	5	junction_3	27.9732014613987	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATATAGGGCCTTATT	-43482518	True	NA	47	True	AATAAA	-7	NA	43483857	43444611	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43446558_43453657_43454044_43476113_43476490_43479889_43479988_43483821
WTC11_00072251	chr5	-	2510	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	-8	0	8	multi-exon	TRUE	canonical	0	0	junction_12	23.7327422679208	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTAATTCTTATTTCA	-43513455	True	NA	-1	True	AATAAA	-23	NA	43515148	43486700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
WTC11_00072252	chr5	-	829	5	FSM	ENSG00000172244.9	ENST00000506213.1	833	5	4	0	4	0	multi-exon	FALSE	canonical	3	78	junction_4	6.20483682299543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAGGGGATTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	43494601	43490328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509
WTC11_00072253	chr5	-	856	1	FSM	ENSG00000249855.1	ENST00000513637.1	1382	1	-25	551	-25	-551	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCTCCAGTCAACATT	NA	False	NA	NA	False	NA	NA	NA	43496479	43495623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43495600_43496500
WTC11_00072254	chr5	-	3237	3	FSM	ENSG00000172244.9	ENST00000514462.1	1208	3	-70	-1959	0	74	multi-exon	FALSE	canonical	3	31	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACAGACTCTCAGAA	-43513455	True	NA	NA	False	NA	NA	NA	43515148	43503590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43506395_43508576_43508667_43514805
WTC11_00072257	chr5	-	2559	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	-825	0	0	multi-exon	FALSE	canonical	3	463	junction_10	241.632448152147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-43548146	True	NA	0	True	AATAAA	-25	NA	43557093	43526266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
WTC11_00072258	chr5	-	1716	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	99	-1	99	0	multi-exon	FALSE	canonical	3	63	junction_10	354.449206516251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	NA	False	NA	1	True	AATAAA	-37	NA	43557596	43527091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
WTC11_00072260	chr5	-	4975	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	-137	-35	-45	35	multi-exon	FALSE	canonical	2	6	junction_1	3.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTCTGCTTATCCCTT	NA	False	NA	-1	True	TATAAA	-19	NA	43603275	43571558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43575936_43583466_43583567_43602777
WTC11_00072261	chr5	-	575	1	FSM	ENSG00000224993.3	ENST00000481681.1	467	1	24	-132	24	132	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTCCCTCTCCCTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	43667208	43666633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43666600_43667200
WTC11_00072262	chr5	-	692	5	FSM	ENSG00000251141.6	ENST00000505401.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	5.70087712549569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGCAAAACATCAAGAGAA	-44808363	True	NA	NA	False	NA	NA	NA	44808726	44777065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44777329_44777908_44777993_44785048_44785182_44786825_44786953_44808641
WTC11_00072263	chr5	-	9830	8	FSM	ENSG00000164588.8	ENST00000303230.6	9933	8	21	82	21	-82	multi-exon	FALSE	canonical	3	8	junction_4	2.9623487647611	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCCATTGCCTTCTG	-45696203	True	NA	NA	False	NA	NA	NA	45696359	45255029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_45262811_45267088_45267254_45303598_45303840_45353099_45353247_45396491_45396711_45461845_45462008_45645184_45645609_45695668
WTC11_00072264	chr5	-	4256	2	FSM	ENSG00000164588.8	ENST00000634658.1	4738	2	151	331	33	-331	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCAGCATTGTCGTTGT	-45696191	True	NA	NA	False	TTTAAA	-13	NA	45696347	45642031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_45645609_45695668
WTC11_00072265	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	21.065003560408	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-50435550	True	NA	0	True	AATAAA	-25	NA	50441288	50396191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
WTC11_00072266	chr5	-	2649	7	FSM	ENSG00000170571.12	ENST00000505896.5	2649	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	23.3482095435365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATGATTTGACAAG	NA	False	NA	-92	True	TTTAAA	-14	NA	50411998	50398026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196
WTC11_00072267	chr5	-	1617	9	FSM	ENSG00000170571.12	ENST00000508934.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	73.4808648560971	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGTGCTTGCTCTA	-50435612	True	NA	-40	True	AATATA	-36	NA	50441350	50398676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411222_50428143_50428228_50441039
WTC11_00072269	chr5	-	3729	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	-24	0	24	multi-exon	FALSE	canonical	3	207	junction_6	15.334239103682	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGTCTCATGTTGC	-53106687	True	NA	26	True	NA	NA	NA	53109757	53095654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
WTC11_00072270	chr5	-	4160	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	30	-24	0	24	multi-exon	FALSE	canonical	3	31	junction_6	78.9234861537848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGTCTCATGTTGC	-53106657	True	NA	26	True	NA	NA	NA	53109727	53095654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
WTC11_00072271	chr5	-	795	5	FSM	ENSG00000164172.20	ENST00000514553.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	18.417043736713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCAGGCCCTATGA	-53106657	True	NA	NA	False	NA	NA	NA	53109727	53101125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
WTC11_00072273	chr5	-	582	5	FSM	ENSG00000185305.12	ENST00000507646.2	578	5	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_1	51.3681564785033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGTAGAAGATTTTA	-54309046	True	NA	NA	False	AAAAAG	-4	NA	54310576	53887360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53887384_54113201_54113411_54154579_54154640_54171783_54171929_54310431
WTC11_00072274	chr5	-	4475	27	FSM	ENSG00000067248.11	ENST00000251636.10	4664	27	0	189	0	5	multi-exon	TRUE	canonical	3	218	junction_19	34.0877739279195	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCATCGTTGTGTT	-55303199	True	NA	-1	True	AATAAA	-19	NA	55307694	55256243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
WTC11_00072275	chr5	-	844	6	FSM	ENSG00000067248.11	ENST00000513447.1	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	116.695158425703	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGGAGGAATTATGC	-55276340	False	13	NA	False	NA	NA	NA	55276360	55270443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55270707_55272086_55272176_55273292_55273427_55274613_55274732_55274865_55275011_55276265
WTC11_00072276	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	65.092549496851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528535	True	NA	-5	True	ATTAAA	-19	NA	55534964	55424853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
WTC11_00072277	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	159.516018004462	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528540	True	NA	-5	True	ATTAAA	-19	NA	55534969	55424853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
WTC11_00072280	chr5	-	2485	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	0	186	combination_of_known_splicesites	FALSE	canonical	3	46	junction_6	35.0136999426434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAGAGGCCCATAGGG	-55709423	True	NA	NA	False	NA	NA	NA	55712293	55625658	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
WTC11_00072281	chr5	-	2648	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	63	-189	0	186	multi-exon	TRUE	canonical	3	97	junction_14	23.3660722701385	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAGAGGCCCATAGGG	-55709391	True	NA	NA	False	NA	NA	NA	55712261	55625658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
WTC11_00072292	chr5	-	5626	13	FSM	ENSG00000155545.20	ENST00000381199.8	5199	13	11	-438	0	437	multi-exon	FALSE	canonical	3	18	junction_4	13.5920217611493	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACTGAGACTCCATCT	-56950645	True	NA	NA	False	NA	NA	NA	56952112	56919164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
WTC11_00072294	chr5	-	5241	14	FSM	ENSG00000155545.20	ENST00000452157.5	5240	14	0	-1	0	0	multi-exon	TRUE	canonical	2	3	junction_9	21.7843111669328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-56950655	True	NA	-6	True	AATAAA	-16	NA	56952122	56919602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938295_56938339_56938882_56939018_56946925_56947072_56950627_56950653_56952093
WTC11_00072295	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	18.9202624548643	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-58456901	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
WTC11_00072298	chr5	-	2509	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	-5	0	5	multi-exon	FALSE	canonical	3	458	junction_9	32.9028874112896	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTTTTTGGCATT	-60691618	True	NA	3	True	AATAAA	-28	NA	60700166	60596906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
WTC11_00072302	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	8.37779804005802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	-60843224	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
WTC11_00072303	chr5	-	3957	8	FSM	ENSG00000164181.14	ENST00000425382.5	3827	8	-57	-73	-57	72	multi-exon	FALSE	canonical	1	4	junction_5	11.084094137869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCACCAATCAAAGTTATT	-60843286	True	NA	71	True	NA	NA	NA	60844331	60751718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60844159
WTC11_00072311	chr5	-	1073	5	FSM	ENSG00000049167.16	ENST00000682418.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	52.8695328142778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTAGTTTCAGAGCC	-60943302	True	NA	NA	False	NA	NA	NA	60945064	60909339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60909958_60918264_60918389_60922053_60922156_60928863_60928960_60944931
WTC11_00072314	chr5	-	3730	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	26	-868	26	868	multi-exon	FALSE	canonical	3	499	junction_1	17.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATAGTTCACTGCAGC	-61152479	True	NA	NA	False	NA	NA	NA	61162442	61156835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_61160200_61161087_61161228_61162216
WTC11_00072315	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	467	junction_1	30.4375800777877	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-62398169	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
WTC11_00072319	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	160.213264120047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398193	True	NA	-23	True	AGTAAA	-17	NA	62403929	62388526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
WTC11_00072321	chr5	-	237	1	FSM	ENSG00000268942.2	ENST00000600888.2	237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGGCAAGCTACTTT	NA	False	NA	NA	False	AAGAAA	-10	NA	62512482	62512245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62512200_62512500
WTC11_00072323	chr5	-	4339	1	FSM	ENSG00000178394.5	ENST00000323865.5	4572	1	234	-1	234	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTGATGCTTTCTTTT	-63962123	False	NA	1	True	AATAAA	-21	NA	63962211	63957872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_63957900_63962200
WTC11_00072327	chr5	-	1478	9	NIC	ENSG00000123219.13	novel	1697	11	NA	NA	0	2	combination_of_known_splicesites	TRUE	canonical	2	12	junction_8	111.102359898429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGATGTGGGATATT	-65558464	False	NA	-4	True	AATAAA	-23	NA	65561564	65517763	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561496
WTC11_00072328	chr5	-	1628	11	NIC	ENSG00000123219.13	novel	1697	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	18	junction_9	98.9644380573143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGATGTGGGATATT	-65560045	True	NA	-4	True	AATAAA	-23	NA	65563145	65517763	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561496_65561565_65563097
WTC11_00072329	chr5	-	1733	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	-2	0	2	multi-exon	FALSE	canonical	3	183	junction_9	50.0260931914536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGATGTGGGATATT	-65560068	True	NA	-4	True	AATAAA	-23	NA	65563168	65517763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
WTC11_00072330	chr5	-	1699	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	-2	0	2	multi-exon	FALSE	canonical	3	71	junction_9	83.1724112912449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGATGTGGGATATT	-65560068	True	NA	-4	True	AATAAA	-23	NA	65563168	65517763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
WTC11_00072331	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	92.7028047040649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	-65560025	True	NA	-60	True	NA	NA	NA	65563125	65517819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
WTC11_00072338	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	8.15107354892593	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-65622998	True	NA	-18	True	AATAAA	-13	NA	65624333	65589689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
WTC11_00072340	chr5	-	887	7	FSM	ENSG00000197860.10	ENST00000506816.1	887	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	15.7126983325236	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAACAGAAGTTAAGAGAG	-65722969	True	NA	NA	False	NA	NA	NA	65723035	65680687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65722756
WTC11_00072341	chr5	-	1007	2	FSM	ENSG00000229666.2	ENST00000451496.2	904	2	-109	6	-109	-6	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACATGAGGAACCAGAAT	-67004070	True	NA	NA	False	AATAAA	-10	NA	67004189	67001388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67002050_67003843
WTC11_00072343	chr5	-	270	1	FSM	ENSG00000213864.3	ENST00000519625.1	676	1	433	-27	433	27	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGCTTGATAGATAAAA	NA	False	NA	NA	False	TTTAAA	-1	NA	68159460	68159190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_68159200_68159500
WTC11_00072344	chr5	-	946	1	FSM	ENSG00000213830.3	ENST00000508046.1	502	1	-19	-425	-19	425	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTGGTTCCTCTCCC	NA	False	NA	NA	False	TATAAA	-30	NA	69313891	69312945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69312900_69313900
WTC11_00072346	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	467.216759117222	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-69353052	True	NA	0	True	TATAAA	-16	NA	69369520	69350983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
WTC11_00072347	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	340.898078610015	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	-69369955	True	NA	-7	True	AATAAA	-17	NA	69370013	69351725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
WTC11_00072349	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_1	187.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-69353052	True	NA	-6	True	AATAAA	-17	NA	69369520	69364742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502_69366596_69369462
WTC11_00072350	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	740.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-69369955	True	NA	-7	True	AATAAA	-16	NA	69370013	69364743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502_69366596_69369656
WTC11_00072358	chr5	-	5935	6	FSM	ENSG00000249437.8	ENST00000315147.8	5935	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.31058907144937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTAACTGGAGCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	70987150	70968482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70970469_70974128_70974294_70976159_70976247_70976905_70977059_70979868_70980037_70983774
WTC11_00072359	chr5	-	1823	18	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	0	42849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.317390206656	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCTTTGCTTTACTCC	NA	False	NA	NA	False	NA	NA	NA	71067638	70989820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_70989847_71035343_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
WTC11_00072360	chr5	-	1819	17	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	0	30488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.539330936764	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGATAATCAACAACTTG	NA	False	NA	NA	False	NA	NA	NA	71067674	71002181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_71002208_71035343_71035797_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
WTC11_00072361	chr5	-	4332	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	4	0	-4	multi-exon	FALSE	canonical	3	31	junction_3	189.061847611363	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCACTGATATATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	71067601	71032673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
WTC11_00072363	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	202.49934413474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067650	71035075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
WTC11_00072365	chr5	-	985	9	NNC	ENSG00000145736.14	novel	860	8	NA	NA	0	2114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.408756054953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCACAGTGGCGA	NA	False	NA	NA	False	NA	NA	NA	71067648	71052915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_71052950_71055058_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
WTC11_00072366	chr5	-	1081	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	15	-236	0	236	multi-exon	FALSE	canonical	3	170	junction_7	176.981378012675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATATATAAGTTAAAGC	NA	False	NA	NA	False	TATAAA	-20	NA	71067674	71054793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
WTC11_00072367	chr5	-	1054	9	ISM	ENSG00000145736.14	ENST00000330280.11	2077	17	6	19974	4	-20	5prime_fragment	FALSE	canonical	3	82	junction_8	221.394691388479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGTTGGTTGTACCTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	71067644	71055049	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
WTC11_00072369	chr5	-	549	4	ISM	ENSG00000230847.4	ENST00000445744.3	679	5	27	2087	27	-2087	5prime_fragment	FALSE	canonical	3	128	junction_2	29.7993288515027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTATCCGAGATTGTT	NA	False	NA	NA	False	AATACA	-23	NA	71093166	71076311	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71076353_71079796_71079969_71082776_71082993_71093046
WTC11_00072371	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	47.3184953268804	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-72308745	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
WTC11_00072372	chr5	-	2801	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	17	-190	0	65	multi-exon	FALSE	canonical	0	0	junction_10	226.464323901139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTACCAGTGTCCCCA	-72308743	True	NA	NA	False	NA	NA	NA	72320238	72219337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
WTC11_00072373	chr5	-	832	7	FSM	ENSG00000113048.17	ENST00000522562.5	832	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	334.391694806488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAGAGGAGCAGTCCCA	-72238095	False	NA	NA	False	NA	NA	NA	72238130	72223802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72223851_72226056_72226200_72227049_72227276_72228265_72228369_72232442_72232559_72234118_72234198_72238013
WTC11_00072374	chr5	-	1183	8	FSM	ENSG00000113048.17	ENST00000515404.5	1183	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	267.330110079471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGGTGCAGTGGTGGC	-72308744	True	NA	NA	False	NA	NA	NA	72320239	72227762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
WTC11_00072378	chr5	-	2522	1	FSM	ENSG00000251493.5	ENST00000615637.3	2512	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCTTCAGTTGTCCC	-73448193	True	NA	NA	False	AATAAA	-33	NA	73448777	73446255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73446300_73448800
WTC11_00072379	chr5	-	827	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	-86	3	-86	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTGGTCTTAACCAT	-73498233	True	NA	-5	True	AATAAA	-18	NA	73498379	73497552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73497600_73498400
WTC11_00072381	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	9.25253343684853	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-73564585	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
WTC11_00072394	chr5	-	6585	9	ISM	ENSG00000198780.13	ENST00000687041.1	6125	13	30786	0	13254	0	3prime_fragment	TRUE	canonical	3	197	junction_4	24.5226298548912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74835581	False	NA	-1	True	AATAAA	-14	NA	74835601	74777573	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425
WTC11_00072398	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	54.583969461942	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74865690	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
WTC11_00072403	chr5	-	4694	1	FSM	ENSG00000176928.7	ENST00000322348.5	5554	1	861	-1	861	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTTTATGAGCTTT	NA	False	NA	0	True	AATAAA	-22	NA	75030038	75025344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75025300_75030000
WTC11_00072409	chr5	-	5288	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	16	-2150	0	0	multi-exon	FALSE	canonical	3	92	junction_1	13.5945761243225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTATGGACAAATATGC	-75506882	True	NA	-17	True	ATTAAA	-29	NA	75511617	75371119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
WTC11_00072410	chr5	-	3983	17	FSM	ENSG00000113163.19	ENST00000646713.1	3983	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	31.5009920478705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTGATGTTTAAAAA	-75506882	True	NA	-40	True	NA	NA	NA	75511617	75372418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
WTC11_00072413	chr5	-	4313	16	FSM	ENSG00000113163.19	ENST00000646511.1	3056	16	372	-1629	0	886	multi-exon	FALSE	canonical	3	111	junction_6	11.3970756483114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAGTATGTCTTTCT	-75511245	False	NA	NA	False	AATGAA	-31	NA	75511266	75376888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
WTC11_00072415	chr5	-	2107	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	78	0	0	multi-exon	FALSE	canonical	3	67	junction_7	8.49987846291331	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	-75715858	True	NA	NA	False	ATTAAA	-4	NA	75717437	75674201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
WTC11_00072421	chr5	-	6408	3	FSM	ENSG00000132846.6	ENST00000255198.3	6134	3	-66	-208	-66	208	multi-exon	FALSE	canonical	3	16	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACCATAGAATTTTAACA	-77086917	True	NA	NA	False	NA	NA	NA	77087351	77071863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77077896_77078593_77078729_77087110
WTC11_00072422	chr5	-	4475	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	-251	-546	-60	546	multi-exon	FALSE	canonical	3	204	junction_2	24.0756908289023	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGGCATTGAACTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	77492567	77430386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
WTC11_00072423	chr5	-	3268	7	FSM	ENSG00000164253.14	ENST00000502528.5	3268	7	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	16.6899836894934	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACACATTAAAGATTGA	-77452862	False	NA	-32	True	AATGAA	-15	NA	77452873	77432243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290
WTC11_00072426	chr5	-	659	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	2	0	-2	multi-exon	FALSE	canonical	3	2412	junction_2	19.7989898732233	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAATCTGTTAGGTTC	-77732326	True	NA	44	True	ATTAAA	-23	NA	77776339	77691167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
WTC11_00072427	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_1	21	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	-77732274	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77693353_77708241_77708348_77776204
WTC11_00072429	chr5	-	974	5	FSM	ENSG00000132842.14	ENST00000517940.1	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	10.1334840997556	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGATTTTTTTTTCTG	-78116165	True	NA	NA	False	ATTAAA	-26	NA	78116187	78088980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125
WTC11_00072431	chr5	-	5304	6	NNC	ENSG00000145685.14	novel	4977	5	NA	NA	0	297	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	84.5780113268218	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTCCGAAGTATTAAA	-78648602	False	994	NA	False	AGTAAA	-15	NA	78648617	78484917	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_78489154_78494361_78494532_78509783_78510399_78564812_78564872_78632263_78632369_78648498
WTC11_00072435	chr5	-	4852	8	FSM	ENSG00000113273.17	ENST00000264914.10	4852	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	10.5887888344037	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATCATTGCCCTAAG	-78984129	True	NA	NA	False	AATAAA	-33	NA	78985310	78777208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78780663_78781851_78781975_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
WTC11_00072436	chr5	-	1159	3	FSM	ENSG00000113273.17	ENST00000521800.2	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	37.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTTTGTTATGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	78955374	78884293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78885129_78885583_78885828_78955294
WTC11_00072437	chr5	-	415	2	Genic_Genomic	ENSG00000213757.3	novel	787	1	NA	NA	454	2783	multi-exon	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTGGGCACAGTGA	NA	False	NA	NA	False	AGTAAA	-29	NA	79284464	79281348	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_79281380_79284080
WTC11_00072438	chr5	-	815	1	FSM	ENSG00000213757.3	ENST00000474167.1	787	1	23	-51	23	51	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAATAAAAAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	79284895	79284080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79284100_79284900
WTC11_00072440	chr5	-	8315	7	ISM	ENSG00000177034.17	ENST00000509852.6	4778	8	18	-3061	4	0	intron_retention	FALSE	canonical	3	29	junction_1	17.1949605020386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-79989318	True	NA	0	True	AATAAA	-29	NA	79991241	79976715	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593
WTC11_00072441	chr5	-	7937	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	1	-7	1	7	multi-exon	FALSE	canonical	3	21	junction_1	19.5703857907809	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTATTTATTCTTT	-79989338	True	NA	7	True	AATAAA	-36	NA	79991261	79976708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
WTC11_00072442	chr5	-	7851	8	FSM	ENSG00000177034.17	ENST00000512560.5	4799	8	0	-3052	0	7	multi-exon	FALSE	canonical	3	19	junction_7	23.9642591015394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTATTTATTCTTT	-79989322	True	NA	7	True	AATAAA	-36	NA	79991245	79976708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79991157
WTC11_00072444	chr5	-	7984	12	FSM	ENSG00000164300.17	ENST00000507668.7	6448	12	1	-1537	1	1537	multi-exon	FALSE	canonical	3	35	junction_1	16.9910039396156	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTTTTAGGTGTTT	-80242367	True	NA	NA	False	NA	NA	NA	80256047	80137189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80143811_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
WTC11_00072445	chr5	-	1581	1	ISM	ENSG00000164300.17	ENST00000507668.7	6448	12	115741	0	26873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTTTGAAATATGT	-80140276	False	NA	-12	True	AATAAA	-24	NA	80140307	80138726	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_80138700_80140300
WTC11_00072447	chr5	-	254	1	FSM	ENSG00000227087.4	ENST00000424312.2	969	1	65	650	65	-650	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGTGGATCATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	80332476	80332222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80332200_80332500
WTC11_00072448	chr5	-	958	1	FSM	ENSG00000248569.1	ENST00000514280.1	936	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCACGCTGGCCCCAGC	NA	False	NA	NA	False	NA	NA	NA	80351978	80351020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80351000_80352000
WTC11_00072453	chr5	-	4076	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	8	-165	8	165	multi-exon	FALSE	canonical	3	706	junction_1	66.6855306644552	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCACTTTTTCCAGATT	-80653576	True	NA	NA	False	AAAACA	-36	NA	80654975	80626060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
WTC11_00072457	chr5	-	540	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	-5	0	2	multi-exon	FALSE	canonical	3	12	junction_2	3.29983164553722	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTAATAAGTTCAACAT	-80960896	False	NA	1	True	AATAAA	-21	NA	80960907	80947691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
WTC11_00072458	chr5	-	1292	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	17	-708	0	708	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGCTGCCTTCTTCCC	-81299413	True	NA	NA	False	AAGAAA	-41	NA	81301506	81235050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81236123_81301286
WTC11_00072459	chr5	-	2033	2	FSM	ENSG00000247572.9	ENST00000660242.1	2020	2	-19	6	-2	-2	multi-exon	FALSE	canonical	3	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTGATGTGTGTT	-81299432	True	NA	-20	True	AGTAAA	-11	NA	81301525	81237566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81239361_81301286
WTC11_00072460	chr5	-	8969	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-161	33	-5	-33	multi-exon	TRUE	canonical	3	116	junction_14	17.8648353966668	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAATTAAACTTTGGT	-81751239	False	NA	NA	False	AATAGA	-5	NA	81751258	81412836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
WTC11_00072464	chr5	-	3258	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	-6	0	6	multi-exon	FALSE	canonical	3	10370	junction_3	1541.98407543298	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTGTCTGCGGCTCG	-82082969	True	NA	-4	True	AATAAA	-23	NA	82278354	82273313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
WTC11_00072467	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13479	junction_1	151.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	-82277860	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276256_82276397_82276519_82277692
WTC11_00072468	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_3	6064.2309945743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	-82278052	False	NA	-113	True	NA	NA	NA	82278143	82276154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
WTC11_00072473	chr5	-	4881	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	-208	176	-208	-176	multi-exon	FALSE	canonical	3	63	junction_2	7.22841614740048	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCCCAAAATATATTGAC	-83721047	False	NA	NA	False	AAAAAG	-36	NA	83721063	83637980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
WTC11_00072475	chr5	-	4816	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	-2	0	2	multi-exon	FALSE	canonical	3	149	junction_9	54.5468605879385	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGTCTGAATGTGAAT	-84383998	True	NA	35	True	ATTAAA	-19	NA	84384880	83940551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
WTC11_00072476	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	45.3431361950185	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-84379545	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
WTC11_00072477	chr5	-	739	1	FSM	ENSG00000242477.1	ENST00000486625.1	651	1	-91	3	-91	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAATAAACTCTATTAC	NA	False	NA	NA	False	NA	NA	NA	86884972	86884233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_86884200_86885000
WTC11_00072480	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	29.4403528341628	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407496	True	NA	-11	True	AATAAA	-15	NA	87412930	87394273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
WTC11_00072481	chr5	-	1532	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	-35	0	-9	0	multi-exon	FALSE	canonical	3	10	junction_8	141.007479854794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87412852	False	NA	-11	True	AATAAA	-15	NA	87412939	87394273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
WTC11_00072484	chr5	-	7605	9	FSM	ENSG00000164180.14	ENST00000510089.5	7608	9	3	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	32.6601821795286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTAAAGTTTTATGG	-88267832	True	NA	21	True	NA	NA	NA	88268845	88195168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88196489_88197668_88203076_88205753_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88268720
WTC11_00072485	chr5	-	2477	11	NIC	ENSG00000164180.14	novel	1796	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	20.7894203863407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAAGCAATTTATT	-88267816	True	NA	-17	True	ATTAAA	-18	NA	88268829	88195206	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_88196489_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
WTC11_00072491	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	60.6892700565759	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	-90405792	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
WTC11_00072492	chr5	-	2450	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	-1424	0	-29	multi-exon	FALSE	canonical	3	16	junction_2	336.119621563514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAATAAAACAGTAAAA	-90405793	True	NA	NA	False	AATATA	-17	NA	90409757	90392285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
WTC11_00072493	chr5	-	7722	4	FSM	ENSG00000153140.9	ENST00000522565.5	867	4	-69	-6786	-60	-4	multi-exon	FALSE	canonical	3	697	junction_1	11.2644968324772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTTTGTGAGTCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	90409826	90392260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90399550_90405684_90405800_90407698_90407835_90409644
WTC11_00072494	chr5	-	664	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAAAACTTGAAGGGTG	-90405802	True	NA	NA	False	NA	NA	NA	90409766	90405393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90405800_90407698_90407835_90409644
WTC11_00072495	chr5	-	4289	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	-12	0	12	multi-exon	FALSE	canonical	3	36	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATATTTTTATAACATT	-90474336	True	NA	-21	True	AATAAA	-27	NA	90474771	90458196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90461553_90473838
WTC11_00072497	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0.5	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-90526467	True	NA	0	True	AATAAA	-23	NA	90529584	90515625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90519485_90525034_90525301_90529447
WTC11_00072505	chr5	-	4700	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	-16	0	16	multi-exon	FALSE	canonical	3	29	junction_9	13.2245982925758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCCAAGTACATGTAT	-94110952	True	NA	NA	False	AATAAA	-34	NA	94111663	93617708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
WTC11_00072506	chr5	-	830	1	FSM	ENSG00000249353.2	ENST00000502784.2	830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAGTTTAAACAATT	-93683636	False	NA	NA	False	NA	NA	NA	93683667	93682837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93682800_93683700
WTC11_00072507	chr5	-	1861	8	NNC	ENSG00000113391.19	novel	965	6	NA	NA	2	-20789	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	25.3119315254885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTCACCACCTAGGACA	NA	False	NA	NA	False	AATAAA	-6	NA	94074769	93804983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_93805921_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645
WTC11_00072509	chr5	-	2252	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	7	3	7	-3	multi-exon	FALSE	canonical	2	7	junction_1	4.76969600708473	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATATGAATTTTCAAAT	-94618278	True	NA	8	True	AATAAA	-23	NA	94618590	94519208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
WTC11_00072511	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_30	27.359121732068	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	-95549375	True	NA	-21	True	AATAAA	-15	NA	95554977	95463893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
WTC11_00072512	chr5	-	784	9	FSM	ENSG00000198677.12	ENST00000508181.5	872	9	88	0	88	0	multi-exon	FALSE	canonical	2	12	junction_3	61.1918090923941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGACATTGCTATTTAA	-95516576	False	NA	NA	False	TATAAA	-19	NA	95516586	95502902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95503004_95503813_95503939_95506933_95506993_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524
WTC11_00072518	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_10	15.592963023998	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-95958567	True	NA	-7	True	AATAAA	-17	NA	95961851	95885097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
WTC11_00072519	chr5	-	413	3	FSM	ENSG00000118985.16	ENST00000508757.1	468	3	0	55	0	-55	multi-exon	FALSE	canonical	3	111	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCTTGCAGACCAGCCT	-95898302	False	NA	NA	False	NA	NA	NA	95898317	95891003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95891275_95895627_95895692_95898239
WTC11_00072520	chr5	-	467	5	FSM	ENSG00000118985.16	ENST00000635633.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	44.5666635502367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCGCAACCGAAGCACAAA	-95961663	False	NA	NA	False	NA	NA	NA	95961674	95913819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95913935_95919423_95919546_95932631_95932714_95943001_95943050_95961574
WTC11_00072521	chr5	-	5110	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	26	0	-26	multi-exon	FALSE	canonical	2	7	junction_2	7.20699857099798	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCTCATGTTTCCAC	-96433021	True	NA	NA	False	AATAAA	-24	NA	96433248	96390358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
WTC11_00072522	chr5	-	5495	20	FSM	ENSG00000164307.13	ENST00000296754.7	5495	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.871702066244	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTGTCATCATTCTT	-96808058	False	NA	NA	False	AATAAA	-20	NA	96808100	96760809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96763229_96776403_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
WTC11_00072524	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_7	19.5776390460465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	-97178570	True	NA	0	True	AATAAA	-17	NA	97183247	97160866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
WTC11_00072527	chr5	-	457	2	FSM	ENSG00000058729.11	ENST00000511012.1	442	2	0	-15	0	15	multi-exon	FALSE	canonical	3	351	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTTGACTTGTC	-97167703	False	NA	NA	False	ATTAAA	-35	NA	97167719	97164943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_97165148_97167466
WTC11_00072533	chr5	-	1968	4	FSM	ENSG00000153922.11	ENST00000512392.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	14.6363322667334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTTTTTTTGACTGTT	-98860670	False	NA	0	True	ATTAAA	-28	NA	98860682	98855731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971
WTC11_00072534	chr5	-	848	5	FSM	ENSG00000153922.11	ENST00000512844.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	123.339977298522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTATCAGTAGCAGTAT	-98868512	False	18	NA	False	TATAAA	-5	NA	98868539	98856282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98868494
WTC11_00072541	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.5017005425652	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119475	True	NA	-3	True	AATAAA	-19	NA	103120138	103085999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
WTC11_00072542	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.8446217637202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	-103119434	True	NA	2	True	ATTAAA	-18	NA	103120097	103087812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
WTC11_00072543	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	8.4803694888057	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	-103561485	True	NA	-4	True	ATTAAA	-14	NA	103562789	103548854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
WTC11_00072545	chr5	-	2192	7	NIC	ENSG00000112874.10	novel	3488	7	NA	NA	29	390	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	33.3287496848525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTATTAAGACAAACCAA	-103561456	True	NA	NA	False	NA	NA	NA	103562760	103550117	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560251_103562702
WTC11_00072548	chr5	-	3858	2	NNC	ENSG00000184349.14	novel	5372	5	NA	NA	7823	12359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCACCTGATGGAATCA	NA	False	NA	NA	False	AAAAAG	-15	NA	107380730	107364534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_107364556_107376893
WTC11_00072549	chr5	-	3878	2	NNC	ENSG00000184349.14	novel	5372	5	NA	NA	7823	12359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCACCTGATGGAATCA	NA	False	NA	NA	False	AAAAAG	-15	NA	107380730	107364534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_107364580_107376897
WTC11_00072550	chr5	-	561	3	FSM	ENSG00000145743.18	ENST00000518486.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCGGTTGCCTCTCACT	-108380915	False	NA	NA	False	NA	NA	NA	108380963	108364822	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_108364996_108367830_108367954_108380698
WTC11_00072552	chr5	-	958	1	FSM	ENSG00000176857.5	ENST00000511478.1	1143	1	119	66	119	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAACCTTCAAGCAGAGC	NA	False	NA	NA	False	NA	NA	NA	109052338	109051380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109051400_109052300
WTC11_00072553	chr5	-	4654	9	FSM	ENSG00000198961.10	ENST00000361557.4	4645	9	0	-9	0	9	multi-exon	FALSE	canonical	3	285	junction_4	23.3876970862888	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAATTGTATCACTTC	-109383419	True	NA	2	True	AATAAA	-35	NA	109383433	109334703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402
WTC11_00072554	chr5	-	4865	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	-9	0	0	multi-exon	FALSE	canonical	3	285	junction_4	22.0543660468488	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAATTGTGTAATTG	-109404534	True	NA	-7	True	AATAAA	-26	NA	109409974	109334712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
WTC11_00072555	chr5	-	331	1	FSM	ENSG00000202512.1	ENST00000365642.1	335	1	-2	6	-2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCACTTATTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	109699836	109699505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109699500_109699800
WTC11_00072557	chr5	-	4529	7	NNC	ENSG00000164211.13	novel	4631	6	NA	NA	62	71598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.009634216535	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGAAGATGCATATATG	-111512399	False	NA	NA	False	NA	NA	NA	111512409	111424434	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_111424464_111496037_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
WTC11_00072561	chr5	-	4722	6	FSM	ENSG00000164211.13	ENST00000296632.8	4631	6	0	-91	0	91	multi-exon	FALSE	canonical	3	240	junction_1	28.7930547181087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTACAAAAGGAAAATATA	-111507764	True	NA	95	True	TTTAAA	-24	NA	111512535	111495941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
WTC11_00072564	chr5	-	4691	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	52	-3940	0	91	multi-exon	FALSE	canonical	3	69	junction_5	93.7174476818484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTACAAAAGGAAAATATA	-111507739	True	NA	95	True	TTTAAA	-24	NA	111512510	111495941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
WTC11_00072565	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	16.5435032565657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	-111507819	True	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
WTC11_00072566	chr5	-	1186	4	FSM	ENSG00000164211.13	ENST00000509887.5	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	118.133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCACTTTGGGATTT	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111500245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111501117_111506329_111506380_111507328_111507443_111512384
WTC11_00072571	chr5	-	2304	3	FSM	ENSG00000134986.14	ENST00000447165.6	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_2	99	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-111756239	False	NA	-5	True	AATAAA	-20	NA	111756251	111729302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769
WTC11_00072572	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	127.439746111207	3207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-111747579	True	NA	-5	True	AATAAA	-20	NA	111757194	111729302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
WTC11_00072574	chr5	-	801	5	FSM	ENSG00000134986.14	ENST00000515855.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	652.164089781092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTAGTAGTTTATGT	-111747579	True	NA	NA	False	NA	NA	NA	111757194	111730516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111734669_111734743_111735429_111735508_111755769_111755831_111757135
WTC11_00072576	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	-111757217	False	NA	NA	False	NA	NA	NA	111757229	111730641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111757135
WTC11_00072579	chr5	-	1198	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	-244	-256	-244	-33	multi-exon	FALSE	canonical	3	150	junction_4	551.696191304598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCCCCACCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	111758462	111730549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
WTC11_00072586	chr5	-	830	7	FSM	ENSG00000129595.14	ENST00000515047.5	851	7	0	21	0	-21	multi-exon	FALSE	canonical	3	19	junction_1	6.59334681495083	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGATTCTCACTGATAA	-112205457	False	NA	NA	False	AATAAA	-7	NA	112205502	112170029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420
WTC11_00072592	chr5	-	8264	17	FSM	ENSG00000171444.18	ENST00000302475.8	8257	17	0	-7	0	7	multi-exon	FALSE	canonical	3	30	junction_12	5.94243216200236	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTATTTAAAGGGTAAG	-113294194	True	NA	8	True	AATAAA	-29	NA	113294949	113022091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
WTC11_00072594	chr5	-	4166	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	-10	0	0	multi-exon	FALSE	canonical	3	55	junction_7	10.9149348357714	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTGTAATTATTCAGA	-115168256	True	NA	-17	True	AATAAA	-14	NA	115169908	115124761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
WTC11_00072596	chr5	-	683	1	FSM	ENSG00000250472.1	ENST00000503723.1	881	1	228	-30	228	30	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACTCTTAAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	115149416	115148733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115148700_115149400
WTC11_00072597	chr5	-	9554	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	-4	0	4	multi-exon	FALSE	canonical	3	258	junction_2	28.4316614885588	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAATGGATTTCATTT	-115258545	True	NA	-5	True	AATAAA	-26	NA	115262877	115204007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
WTC11_00072600	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	18.7978196791904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-115295058	True	NA	-11	True	TATAAA	-19	NA	115296654	115267189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
WTC11_00072601	chr5	-	2145	9	FSM	ENSG00000164221.13	ENST00000506442.5	2145	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	41.3098051314697	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATTTGTTTGAA	-115296660	False	NA	-25	True	NA	NA	NA	115296693	115267374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115267919_115268881_115269001_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
WTC11_00072603	chr5	-	5785	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	-88	0	-88	0	multi-exon	FALSE	canonical	3	53	junction_1	9	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	NA	False	NA	-3	True	AATAAA	-18	NA	115544863	115520907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115525618_115542949_115543684_115544522
WTC11_00072605	chr5	-	3918	3	FSM	ENSG00000134970.14	ENST00000456936.4	3918	3	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	18.5	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGTATCAGTGTTTT	-115625893	False	NA	0	True	AGTAAA	-22	NA	115626036	115613209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115616446_115620434_115620681_115625600
WTC11_00072606	chr5	-	1874	6	NNC	ENSG00000129596.5	novel	1565	5	NA	NA	-282	30596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.726474857109	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGCTGGGTGGGGTGCA	-115816917	False	NA	NA	False	NA	NA	NA	115816941	115774136	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115774164_115804732_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
WTC11_00072607	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	20.2530861845794	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-115816635	False	NA	0	True	AATAAA	-17	NA	115816659	115804732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
WTC11_00072608	chr5	-	5420	2	FSM	ENSG00000145782.13	ENST00000505252.1	3274	2	0	-2146	0	5	multi-exon	FALSE	canonical	3	685	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTCTTGGAGTCACT	-115834329	False	NA	-13	True	AATAAA	-22	NA	115834352	115828194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601
WTC11_00072609	chr5	-	5657	3	FSM	ENSG00000145782.13	ENST00000511984.5	567	3	-1771	-3319	-58	5	multi-exon	FALSE	canonical	3	677	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTCTTGGAGTCACT	-115839529	False	NA	-13	True	AATAAA	-22	NA	115839552	115828194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115837627
WTC11_00072610	chr5	-	4045	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	-5	0	5	multi-exon	FALSE	canonical	3	580	junction_3	47.7237420531496	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTCTTGGAGTCACT	-115836324	True	NA	-13	True	AATAAA	-22	NA	115841565	115828194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
WTC11_00072611	chr5	-	1582	4	FSM	ENSG00000145782.13	ENST00000513322.5	1558	4	0	-24	0	0	multi-exon	FALSE	canonical	3	18	junction_3	312.558261235672	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAAAATGACTGAAATT	-115841312	True	NA	-13	True	TATAAA	-16	NA	115841823	115831487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817
WTC11_00072615	chr5	-	508	1	FSM	ENSG00000185641.6	ENST00000469891.2	373	1	-56	-79	-56	79	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGTATATATTCTCCAC	NA	False	NA	NA	False	AATAAA	-38	NA	116052345	116051837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116051800_116052300
WTC11_00072616	chr5	-	1630	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAAGGTTGCTGTCAGC	-116085226	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116083800_116085400
WTC11_00072617	chr5	-	6831	19	FSM	ENSG00000092421.17	ENST00000343348.11	6828	19	0	-3	0	3	multi-exon	FALSE	canonical	3	1092	junction_9	81.4226892271906	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTGAATGCTTTT	-116542114	True	NA	1	True	AATAAA	-23	NA	116574823	116443551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116447812_116467582_116467748_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
WTC11_00072619	chr5	-	4200	2	FSM	ENSG00000092421.17	ENST00000513137.5	3640	2	-1647	1087	-1647	467	multi-exon	FALSE	canonical	3	1168	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGGACCAGCCCAAAATG	-116471083	False	NA	NA	False	NA	NA	NA	116471191	116447220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116447812_116467582
WTC11_00072625	chr5	-	5802	6	NNC	ENSG00000169570.10	novel	5776	6	NA	NA	35819	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	15.6537535434796	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	-118951714	True	NA	0	True	ATTAAA	-25	NA	118952401	118836073	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118952121
WTC11_00072626	chr5	-	5776	6	FSM	ENSG00000169570.10	ENST00000510708.6	5776	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	13.0384048104053	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	-118987320	True	NA	0	True	ATTAAA	-25	NA	118988547	118836073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988293
WTC11_00072627	chr5	-	5203	7	FSM	ENSG00000113083.15	ENST00000231004.5	5076	7	-85	-42	69	42	multi-exon	TRUE	canonical	3	8	junction_6	2.49443825784929	4714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAGTTGAAATGTTA	-122078258	True	NA	NA	False	AATAAA	-12	NA	122078344	122063152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_122066750_122070052_122070169_122070493_122070590_122074012_122074170_122075403_122075542_122076892_122077002_122077354
WTC11_00072628	chr5	-	475	1	FSM	ENSG00000263432.2	ENST00000577215.2	297	1	-50	-128	-50	128	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTCCTCCAGGACTCA	-123022822	False	NA	NA	False	AAAACA	-8	NA	123022833	123022358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123022400_123022800
WTC11_00072630	chr5	-	5068	20	FSM	ENSG00000168944.17	ENST00000306467.10	4993	20	15	-90	15	88	multi-exon	FALSE	canonical	0	0	junction_13	30.0516637322261	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAGTGTTTACATACT	-123420610	True	NA	84	True	NA	NA	NA	123423388	123344801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
WTC11_00072631	chr5	-	4880	20	FSM	ENSG00000168944.17	ENST00000675330.1	4873	20	0	-7	0	2	multi-exon	FALSE	canonical	0	0	junction_13	30.0516637322261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTTGAGCAGCCTGT	-123423383	False	NA	-2	True	AATAAA	-21	NA	123423421	123344887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390006_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
WTC11_00072635	chr5	-	4728	9	FSM	ENSG00000168916.16	ENST00000504926.5	4726	9	0	-2	0	-1	multi-exon	FALSE	canonical	2	3	junction_8	22.6260358878881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTGTCTGTCTCATG	-124744510	False	24	20	True	ATTAAA	-24	NA	124744521	124636913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124637907_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744412
WTC11_00072636	chr5	-	6154	10	FSM	ENSG00000168916.16	ENST00000513986.2	6152	10	0	-2	0	0	multi-exon	FALSE	canonical	3	7	junction_9	21.0947304870432	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCTGTCTCATGT	-124746628	False	1328	21	True	ATTAAA	-25	NA	124746639	124636912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124637907_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124746194
WTC11_00072637	chr5	-	4784	18	FSM	ENSG00000164904.18	ENST00000409134.8	4765	18	0	-19	0	19	multi-exon	FALSE	canonical	3	543	junction_12	80.9200981446329	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACACTGATACCTCTT	-126582412	True	NA	21	True	AATAAA	-39	NA	126595219	126541821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
WTC11_00072640	chr5	-	203	2	FSM	ENSG00000164904.18	ENST00000637070.1	203	2	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATTGACTGTGCAAAAG	-126583899	False	39	NA	False	AATAAA	-8	NA	126583938	126582778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126582975_126583931
WTC11_00072644	chr5	-	3003	5	FSM	ENSG00000164241.14	ENST00000535381.6	3017	5	14	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.2534243362718	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTGTTTTAAGC	-127073053	True	NA	NA	False	NA	NA	NA	127073492	127045234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127047916_127052612_127052670_127058881_127059003_127071583_127071686_127073450
WTC11_00072645	chr5	-	976	5	FSM	ENSG00000164241.14	ENST00000296662.10	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	16.872685026397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATGAAGCCTATTC	-127073063	True	NA	NA	False	AATAAA	-19	NA	127073502	127051303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127051948_127052612_127052670_127058881_127059003_127071583_127071686_127073450
WTC11_00072646	chr5	-	756	6	FSM	ENSG00000164241.14	ENST00000682830.1	600	6	12	-168	0	0	multi-exon	FALSE	canonical	2	19	junction_3	19.0850727009357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCAGTGTGGGAACTG	-127073041	True	NA	NA	False	AATAAA	-28	NA	127073480	127051611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127051948_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
WTC11_00072648	chr5	-	213	2	FSM	ENSG00000245937.9	ENST00000665302.1	3036	2	2823	0	1175	0	multi-exon	FALSE	canonical	2	6	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGAAGAGGCGTTTC	NA	False	NA	NA	False	NA	NA	NA	128061244	127966816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127966929_128061143
WTC11_00072649	chr5	-	10927	65	FSM	ENSG00000138829.12	ENST00000262464.9	10927	65	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_52	25.8603332526381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTGACTGAAAATTTT	-128532517	True	NA	-19	True	AATAAA	-16	NA	128538245	128257908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_128259830_128261735_128261908_128263424_128263657_128271998_128272119_128273839_128273969_128274566_128274684_128276037_128276161_128277879_128278006_128278634_128278842_128280191_128280318_128286717_128286850_128287307_128287431_128288437_128288558_128289126_128289253_128289881_128289948_128290731_128290885_128291528_128291655_128300816_128300937_128301381_128301511_128302972_128303090_128304956_128305083_128305510_128305637_128305822_128305949_128307134_128307204_128309246_128309400_128309982_128310109_128311299_128311426_128311884_128311954_128312633_128312796_128318148_128318272_128318878_128319002_128328695_128328822_128330572_128330696_128332911_128333035_128334718_128334845_128335169_128335296_128335454_128335578_128335987_128336114_128337996_128338123_128338932_128339062_128344384_128344511_128345356_128345585_128349346_128349473_128349954_128350006_128350867_128351006_128357275_128357396_128361722_128361849_128364599_128364726_128366376_128366431_128369181_128369335_128374627_128374751_128376730_128376854_128377751_128377878_128378770_128378891_128392017_128392156_128393134_128393369_128395121_128395275_128408673_128408800_128446480_128446607_128464723_128464922_128519272_128519369_128527871_128527968_128530594_128530694_128536401_128536485_128537349
WTC11_00072650	chr5	-	1741	9	FSM	ENSG00000138829.12	ENST00000507835.5	1884	9	130	13	130	-13	multi-exon	FALSE	canonical	3	53	junction_4	10.5704481929576	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTTTGAGCCATCAT	-128339048	False	NA	NA	False	ATTAAA	-22	NA	128339061	128328082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_128328822_128330572_128330696_128332911_128333035_128334718_128334845_128335169_128335296_128335454_128335578_128335987_128336114_128337996_128338123_128338932
WTC11_00072653	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4376	junction_1	194.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	-131133108	True	NA	NA	False	NA	NA	NA	131165256	131159026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131162571_131162677_131165094
WTC11_00072654	chr5	-	1033	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	-1	0	1	multi-exon	FALSE	canonical	3	8	junction_2	2050.93349173005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTGTTGCGTTTGAT	-131133201	True	NA	-5	True	AATAAA	-27	NA	131165349	131159283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
WTC11_00072656	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2235.93738731656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-131133177	True	NA	-13	True	AATAAA	-19	NA	131165325	131159291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
WTC11_00072658	chr5	-	3630	2	FSM	ENSG00000169567.13	ENST00000506908.2	3628	2	0	-2	0	0	multi-exon	FALSE	canonical	3	4765	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGTCTCTCTGAGTGT	-131133193	True	NA	-15	True	AATAAA	-17	NA	131165341	131159293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131162677_131165094
WTC11_00072661	chr5	-	8350	28	FSM	ENSG00000158987.22	ENST00000509018.6	8350	28	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_23	9.0405275590506	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCTGTACTTAATTAT	-131632297	True	NA	-1	True	AATAAA	-14	NA	131635229	131423920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
WTC11_00072665	chr5	-	6366	17	FSM	ENSG00000217128.13	ENST00000307954.12	6366	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	11.8201033730674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGTGTTGGTCTTTCT	-131794853	True	NA	0	True	AATAAA	-18	NA	131796950	131641713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131644764_131647089_131647206_131651801_131652000_131670462_131670632_131671504_131672925_131677702_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131744563_131744691_131796829
WTC11_00072668	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.7601893294119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-132226484	True	NA	0	True	ATTAAA	-16	NA	132227853	132190146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
WTC11_00072669	chr5	-	4677	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	-142	12	-138	-12	multi-exon	FALSE	canonical	3	50	junction_14	33.2290289859174	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTTCAGCATTGTC	-132227948	False	NA	-12	True	ATTAAA	-4	NA	132227995	132190158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
WTC11_00072675	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.91578004149024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	-132490335	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
WTC11_00072676	chr5	-	6241	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	81	3	-11	0	multi-exon	FALSE	canonical	2	4	junction_8	9.7459927662604	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTAGTAGTGGTCTGC	-132736437	True	NA	-7	True	AATAAA	-15	NA	132737557	132692630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
WTC11_00072678	chr5	-	4393	10	FSM	ENSG00000164402.14	ENST00000296873.11	4394	10	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_7	61.7521929435169	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTGTCTTTTTTGG	-132777397	False	NA	-1	True	ATTAAA	-20	NA	132777421	132756001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
WTC11_00072679	chr5	-	4100	10	FSM	ENSG00000164402.14	ENST00000448933.5	4270	10	172	-2	172	-2	multi-exon	FALSE	canonical	0	0	junction_7	80.2649932149905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTGTCTTTTTTG	-132777673	False	NA	-2	True	ATTAAA	-19	NA	132777697	132756002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777675
WTC11_00072680	chr5	-	6153	9	ISM	ENSG00000164402.14	ENST00000378721.8	1723	10	17	1834	0	-8	5prime_fragment	FALSE	canonical	0	0	junction_6	65.4293512118224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGAGTTTTTGTGGT	-132777197	False	1839	-12	True	ATTAAA	-9	NA	132777221	132756012	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
WTC11_00072681	chr5	-	694	3	FSM	ENSG00000164402.14	ENST00000481794.5	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	26.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCCCCCAAGCCCCAA	-132777197	False	1839	NA	False	AAGAAA	-34	NA	132777221	132763960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132764420_132765408_132765530_132777107
WTC11_00072683	chr5	-	9536	21	FSM	ENSG00000072364.13	ENST00000265343.10	9536	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	4.91934955049954	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTGAACACTGTACTCT	-132957518	True	NA	-32	True	AATAAA	-26	NA	132963634	132875394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132881187_132883339_132883561_132885075_132885120_132886309_132886404_132887520_132887593_132887845_132887983_132888096_132888161_132889078_132889174_132892163_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
WTC11_00072684	chr5	-	1729	5	FSM	ENSG00000072364.13	ENST00000465484.1	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.56195171219375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATAGTGGCACAGG	-132963500	False	NA	NA	False	NA	NA	NA	132963513	132926700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
WTC11_00072685	chr5	-	541	3	FSM	ENSG00000072364.13	ENST00000421773.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCACGACCGTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	132937740	132934619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132934942_132937066_132937194_132937648
WTC11_00072686	chr5	-	2193	5	FSM	ENSG00000155329.12	ENST00000509437.6	2189	5	0	-4	0	4	multi-exon	FALSE	canonical	3	77	junction_3	114.009867993959	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTCTTTAGTGTTTT	-133021682	True	NA	0	True	AATAAA	-33	NA	133026549	132996980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133022840_133022907_133026496
WTC11_00072687	chr5	-	2166	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	7	5	7	-5	multi-exon	FALSE	canonical	3	309	junction_3	23.3285709425636	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCTGTTATCTCTT	-133021730	True	NA	-9	True	AATAAA	-24	NA	133026597	132996989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
WTC11_00072688	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	139.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-133021704	True	NA	-123	True	NA	NA	NA	133026571	132998211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133006758_133006921_133026496
WTC11_00072690	chr5	-	2196	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	-8	0	8	multi-exon	FALSE	canonical	3	448	junction_2	18	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTGTTTCTGTGTTTC	-133960226	True	NA	-1	True	AATAAA	-28	NA	133968625	133955501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133956991_133959493_133960021_133968445
WTC11_00072691	chr5	-	3241	2	ISM	ENSG00000113583.8	ENST00000231512.5	2188	3	7380	-8	7380	8	3prime_fragment	FALSE	canonical	3	484	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTGTTTCTGTGTTTC	-133952846	False	NA	-1	True	AATAAA	-28	NA	133961245	133955501	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_133956991_133959493
WTC11_00072692	chr5	-	635	2	FSM	ENSG00000113583.8	ENST00000507191.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTGTTGTTTACATT	-133960275	True	NA	NA	False	NA	NA	NA	133968674	133959534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133960021_133968525
WTC11_00072693	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	482.883008605604	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-133969308	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
WTC11_00072694	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	247.331761001292	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	-134004829	False	NA	-43	True	NA	NA	NA	134004842	133971951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
WTC11_00072696	chr5	-	9514	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	-128	0	128	multi-exon	FALSE	canonical	3	6347	junction_2	204.604594278819	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAACTAACCTGCGCAT	-134123014	True	NA	NA	False	NA	NA	NA	134176950	134148806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
WTC11_00072697	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_1	212.073542668575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	-134123028	True	NA	95	True	AATAAA	-41	NA	134176964	134157337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
WTC11_00072703	chr5	-	4932	7	FSM	ENSG00000113575.10	ENST00000481195.6	4582	7	2	-352	2	352	multi-exon	FALSE	canonical	3	1561	junction_1	75.6791472820177	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGACTGTGTTTGAAT	-134205561	True	NA	-40	True	TATAAA	-15	NA	134226071	134193979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134197845_134199085_134199205_134200334_134200497_134200984_134201075_134201847_134202022_134205921_134206132_134225759
WTC11_00072704	chr5	-	739	2	FSM	ENSG00000113575.10	ENST00000495833.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATAAAATTCTTTCAG	-134202461	False	NA	NA	False	NA	NA	NA	134202485	134200973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134201075_134201847
WTC11_00072705	chr5	-	328	2	NNC	ENSG00000006837.12	novel	432	4	NA	NA	0	-51601	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCCTTTCTGGGTCTG	-134370822	True	NA	-6	True	ATTAAA	-18	NA	134371043	134370631	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_134370929_134371012
WTC11_00072706	chr5	-	361	2	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	8	junction_1	0	134	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCCTTTCTGGGTCTG	-134371260	False	NA	-6	True	ATTAAA	-18	NA	134371461	134370631	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_134370929_134371397
WTC11_00072707	chr5	-	1515	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	0	1568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	403.017231503678	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGTCTCAGGTGA	-134395159	True	NA	NA	False	NA	NA	NA	134411881	134400496	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_134400807_134402087_134402927_134409902_134410003_134411615
WTC11_00072710	chr5	-	1232	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	-169	-557	-169	0	multi-exon	FALSE	canonical	3	17	junction_4	118.804461195698	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGTTGGGCAAATGTT	NA	False	NA	-16	True	AATAAA	-20	NA	134613306	134606429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
WTC11_00072713	chr5	-	543	1	FSM	ENSG00000244921.2	ENST00000501056.2	747	1	197	7	197	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTAGGCCTTCCCTAAC	NA	False	NA	NA	False	NA	NA	NA	134923852	134923309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134923300_134923900
WTC11_00072714	chr5	-	777	1	FSM	ENSG00000248923.1	ENST00000511037.1	1812	1	467	568	467	-568	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCCCTGACAAGCGCCT	NA	False	NA	NA	False	NA	NA	NA	134925992	134925215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134925200_134926000
WTC11_00072715	chr5	-	1654	1	FSM	ENSG00000247627.2	ENST00000498999.2	1377	1	-283	6	-283	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCTGTAAATATAGTTT	NA	False	NA	NA	False	NA	NA	NA	134928319	134926665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134926700_134928300
WTC11_00072717	chr5	-	2869	3	FSM	ENSG00000113648.17	ENST00000511494.5	2521	3	-323	-25	-323	0	multi-exon	FALSE	canonical	3	587	junction_1	61.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	NA	False	NA	9	True	NA	NA	NA	135347929	135334409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967
WTC11_00072718	chr5	-	1779	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	-7	0	0	multi-exon	FALSE	canonical	3	20	junction_3	265.717818716912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	-135389292	True	NA	9	True	NA	NA	NA	135399222	135334409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
WTC11_00072719	chr5	-	1880	9	NIC	ENSG00000113648.17	novel	1917	9	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	439	junction_5	101.871165572011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGACTGGTGTGTTCC	-135389268	True	NA	-8	True	AGTAAA	-13	NA	135399198	135334381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
WTC11_00072725	chr5	-	989	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	264.214761131925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATCTGTGTTTAGTTTG	-135389281	True	NA	-3	True	ATTAAA	-22	NA	135399211	135359721	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135359943_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
WTC11_00072727	chr5	-	1681	4	FSM	ENSG00000145824.13	ENST00000512158.6	1687	4	0	6	0	-2	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAATTCTAGACTGCCAC	-135578788	True	NA	-2	True	AATAAA	-17	NA	135578991	135570684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135571869_135574571_135574686_135578433_135578540_135578714
WTC11_00072728	chr5	-	853	3	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTCCA	-136570302	True	NA	1	True	AATAAA	-23	NA	136570899	136565374	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_136565798_136568549_136568729_136570648
WTC11_00072733	chr5	-	6694	14	NIC	ENSG00000146021.15	novel	6805	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	9	junction_4	8.65581174258526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-137736005	False	NA	-10	True	AATAAA	-17	NA	137736080	137617499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
WTC11_00072735	chr5	-	6514	3	FSM	ENSG00000146021.15	ENST00000447439.6	2697	3	-80	-3737	-80	16	multi-exon	FALSE	canonical	3	32	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATAGTCCAGTCTCT	NA	False	NA	6	True	AATAAA	-33	NA	137630023	137617483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137622127_137625752_137625897_137628296
WTC11_00072738	chr5	-	3024	22	FSM	ENSG00000031003.11	ENST00000425075.6	3098	22	74	0	19	0	multi-exon	FALSE	canonical	1	1	junction_9	4.38509121265575	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGTGTACTTGGCTG	-138031519	True	NA	NA	False	CATAAA	-24	NA	138033012	137940171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137948954_137949185_137952627_137952710_137953335_137953466_137954165_137954377_137956476_137956543_137959615_137959764_137960165_137960215_137962404_137962470_137985256_137985390_137987460_137987617_137988273_137988316_138006989_138007148_138011007_138011150_138011767_138011946_138018301_138018515_138021030_138021198_138032781
WTC11_00072742	chr5	-	747	4	FSM	ENSG00000112983.18	ENST00000472478.6	745	4	0	-2	0	2	multi-exon	FALSE	canonical	3	10	junction_2	185.172592164415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTTCTGTGTGTGT	-138160119	False	NA	2	True	AATAAA	-21	NA	138160129	138156879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138157641_138157895_138159554_138159600_138160068
WTC11_00072743	chr5	-	2557	8	NIC	ENSG00000112983.18	novel	2876	20	NA	NA	34	-5	intron_retention	FALSE	canonical	3	24	junction_3	237.021914082015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTTTGGCTTGTTCTG	-138166897	False	NA	-5	True	AATAAA	-14	NA	138166911	138156886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827
WTC11_00072744	chr5	-	3007	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	-2	0	2	multi-exon	FALSE	canonical	3	56	junction_11	176.352055559327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTTCTGTGTGTGT	-138178296	False	NA	2	True	AATAAA	-21	NA	138178599	138156879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072745	chr5	-	2901	20	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	11	-5	combination_of_known_splicesites	FALSE	canonical	1	27	junction_4	178.475802809136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTTTGGCTTGTTCTG	-138168665	True	NA	-5	True	AATAAA	-14	NA	138178617	138156886	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072746	chr5	-	3200	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	-2	0	2	multi-exon	FALSE	canonical	3	193	junction_12	151.850057323983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTTCTGTGTGTGT	-138168678	True	NA	2	True	AATAAA	-21	NA	138178630	138156879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072747	chr5	-	2984	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	-2	0	2	multi-exon	FALSE	canonical	3	193	junction_12	153.341930012636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTTCTGTGTGTGT	-138168681	True	NA	2	True	AATAAA	-21	NA	138178633	138156879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072748	chr5	-	2730	13	NNC	ENSG00000112983.18	novel	2876	20	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	216.38717550313	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	-138167105	False	NA	-15	True	AATAAA	-4	NA	138167119	138156896	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138157268_138157641_138157819_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517
WTC11_00072749	chr5	-	2984	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	-17	0	2	multi-exon	FALSE	canonical	3	126	junction_10	173.161014209623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGTTCTGTGTGTGT	-138178366	False	NA	2	True	AATAAA	-21	NA	138178669	138156879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072750	chr5	-	2535	12	ISM	ENSG00000112983.18	ENST00000512140.5	2876	20	11511	0	-174	0	3prime_fragment	FALSE	canonical	3	384	junction_1	103.461335453803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-138167105	False	NA	-33	True	TTTAAA	-25	NA	138167119	138156914	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517
WTC11_00072751	chr5	-	3305	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	-106	-2	combination_of_known_junctions	FALSE	canonical	3	193	junction_11	162.779574885795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGCTTGTTCTGTGT	-138178481	False	NA	-2	True	AATAAA	-17	NA	138178784	138156883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00072764	chr5	-	1313	3	FSM	ENSG00000094880.11	ENST00000464806.1	562	3	-342	-409	-342	409	multi-exon	FALSE	canonical	3	341	junction_1	21.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCACTGAGTACCCTAGG	NA	False	NA	NA	False	AAGAAA	-37	NA	138190449	138188577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138189149_138189632_138189753_138189827
WTC11_00072768	chr5	-	1074	3	FSM	ENSG00000094880.11	ENST00000394884.7	1079	3	5	0	5	0	multi-exon	FALSE	canonical	3	436	junction_2	41.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTTTGAGTGTCATT	-138207024	True	NA	0	True	AATAAA	-21	NA	138213338	138205870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138206685_138212990_138213064_138213151
WTC11_00072771	chr5	-	2095	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	3	116	junction_13	39.8063359114881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTGCTCCTAGAAGATC	-138329446	True	NA	4	True	AATAAA	-32	NA	138331794	138285252	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
WTC11_00072772	chr5	-	2109	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	-16	0	16	multi-exon	FALSE	canonical	3	110	junction_13	40.3722325338012	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTGCTCCTAGAAGATC	-138329456	True	NA	4	True	AATAAA	-32	NA	138331804	138285252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
WTC11_00072773	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	62.7573900030905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	-138329446	True	NA	-1	True	ATTAAA	-20	NA	138331794	138285572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
WTC11_00072782	chr5	-	4413	17	FSM	ENSG00000113013.16	ENST00000297185.9	4404	17	83	-92	0	92	multi-exon	FALSE	canonical	3	2643	junction_5	115.136586686205	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAACTTACTGTTTTTGG	-138533426	True	NA	NA	False	NA	NA	NA	138575318	138553663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00072783	chr5	-	7459	12	FSM	ENSG00000113013.16	ENST00000649692.2	7459	12	0	0	0	0	multi-exon	FALSE	canonical	3	2755	junction_8	91.5952288627155	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTTCTGCTTTTCTG	-138533529	True	NA	-6	True	AATAAA	-18	NA	138575421	138554887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00072784	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_4	115.096404036886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	-138575533	True	NA	-3	True	TATAAA	-17	NA	138575675	138555826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00072788	chr5	-	1904	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	-15	0	15	multi-exon	FALSE	canonical	2	34	junction_9	8.75312995165828	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGCACCCCCCAGCTG	-139197256	True	NA	NA	False	ATTAAA	-32	NA	139198368	138946708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
WTC11_00072791	chr5	-	647	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	-1	0	1	multi-exon	FALSE	canonical	3	63	junction_2	2.86744175568088	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTCTTAGTCCACCTT	-139403274	True	NA	1	True	CATAAA	-35	NA	139404067	139401499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
WTC11_00072796	chr5	-	1037	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	-6	0	6	multi-exon	FALSE	canonical	3	6	junction_6	4.36597393430856	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTTAAGGTCTATGCT	-139462400	True	NA	-8	True	ATTAAA	-25	NA	139462743	139448553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
WTC11_00072799	chr5	-	1335	5	NNC	ENSG00000113068.10	novel	1336	4	NA	NA	0	783	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.844765853509	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCTTGGCTGGCC	-140295745	True	NA	NA	False	NA	NA	NA	140303101	140244251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_140244279_140245062_140246058_140281448_140281534_140300415_140300583_140303040
WTC11_00072800	chr5	-	1409	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	-73	0	73	multi-exon	FALSE	canonical	3	560	junction_3	46.0241482509152	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGCCCTTCCCAGCT	-140295745	True	NA	87	True	NA	NA	NA	140303101	140244961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
WTC11_00072803	chr5	-	391	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	396	0	-396	multi-exon	FALSE	canonical	3	560	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTCATATTATTTTTA	-140295730	True	NA	NA	False	ATTAAA	-26	NA	140303086	140281355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140281534_140300415_140300583_140303040
WTC11_00072804	chr5	-	2348	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	12	-2	12	2	multi-exon	TRUE	canonical	2	9	junction_2	2.78567765543682	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTGTTTGTTTTAA	-140346241	True	NA	2	True	AATAAA	-21	NA	140346591	140332840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
WTC11_00072805	chr5	-	1157	1	FSM	ENSG00000249637.3	ENST00000685101.1	930	1	-108	-119	-91	119	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTAGCTGTGGTGGTCT	-140401475	False	NA	NA	False	NA	NA	NA	140401551	140400394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140400400_140401600
WTC11_00072806	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_2	42.9495828462474	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549027	True	NA	-23	True	NA	NA	NA	140557456	140550067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
WTC11_00072807	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	143.051345676998	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549044	True	NA	-23	True	NA	NA	NA	140557473	140550067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
WTC11_00072808	chr5	-	787	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	-18	0	0	multi-exon	FALSE	canonical	3	74	junction_2	530	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTTCAATAAAAACATCT	-140549017	True	NA	-72	True	NA	NA	NA	140557446	140550533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140550912_140551060_140551170_140557146
WTC11_00072809	chr5	-	2491	11	NIC	ENSG00000113108.20	novel	2020	13	NA	NA	0	234	intron_retention	FALSE	canonical	3	31	junction_10	14.9415527974839	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCGACAGGGAAACGAAC	-140564320	False	354	NA	False	AATAAA	-27	NA	140564332	140558033	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
WTC11_00072813	chr5	-	2802	10	FSM	ENSG00000113108.20	ENST00000510241.5	2801	10	0	-1	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.8582158839607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-140564242	True	NA	-1	True	AATAAA	-19	NA	140564596	140558267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751
WTC11_00072823	chr5	-	788	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	-139	0	2	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-140632096	True	NA	65	True	NA	NA	NA	140647769	140645284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140645679_140647255_140647363_140647482
WTC11_00072824	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	-140631972	True	NA	-19	True	AATAAA	-21	NA	140647645	140645368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140645726_140647255_140647363_140647482
WTC11_00072825	chr5	-	719	2	FSM	ENSG00000131495.9	ENST00000502960.1	721	2	2	0	2	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCAGGGTGTTCTTGT	-140632096	True	NA	-6	True	CATAAA	-18	NA	140647769	140645473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140645679_140647255
WTC11_00072826	chr5	-	1595	4	FSM	ENSG00000256453.2	ENST00000542735.2	1595	4	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTGTGCTGTCTTG	-140673469	True	NA	1	True	ATTAAA	-18	NA	140673576	140670793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140671751_140672444_140672907_140673270_140673389_140673518
WTC11_00072827	chr5	-	4098	8	FSM	ENSG00000170445.16	ENST00000675898.1	4570	8	472	0	472	0	multi-exon	FALSE	canonical	3	501	junction_3	34.9039498378867	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	140679883	140673034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907
WTC11_00072828	chr5	-	3562	10	FSM	ENSG00000170445.16	ENST00000675763.1	4659	10	1097	0	347	0	multi-exon	FALSE	canonical	3	483	junction_9	37.8822085997512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-140674872	False	NA	NA	False	NA	NA	NA	140683223	140673034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140679128_140679787_140679884_140683099
WTC11_00072832	chr5	-	1949	13	FSM	ENSG00000170445.16	ENST00000504156.7	1948	13	0	-1	0	0	multi-exon	FALSE	canonical	3	403	junction_8	50.4504707609354	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-140683019	True	NA	-2	True	AATAAA	-18	NA	140691370	140673903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
WTC11_00072833	chr5	-	2734	13	FSM	ENSG00000170445.16_ENSG00000256453.2	ENST00000457527.6	1896	13	0	-838	0	-31	multi-exon	TRUE	canonical	3	78	junction_8	131.748155163133	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCGCAGTCACCTAATTAT	-140683026	True	NA	NA	False	NA	NA	NA	140691377	140673065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
WTC11_00072840	chr5	-	5722	27	NNC	ENSG00000131504.18	novel	4668	27	NA	NA	-2	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	113.684032175137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGTGAATTTCTGAG	-141613776	True	NA	2	True	AATAAA	-27	NA	141619002	141515008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
WTC11_00072841	chr5	-	574	5	FSM	ENSG00000131504.18	ENST00000494967.5	629	5	55	0	55	0	multi-exon	FALSE	canonical	3	358	junction_4	14.8555545167456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACACTTCTTGGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	141534433	141528544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334
WTC11_00072842	chr5	-	508	3	FSM	ENSG00000131504.18	ENST00000472516.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTAAACTTCCTAGAAT	-141579074	True	NA	NA	False	AGTAAA	-40	NA	141579129	141577988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141578344_141578514_141578626_141579087
WTC11_00072843	chr5	-	1952	13	FSM	ENSG00000171720.10	ENST00000469550.6	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_12	79.8267220644538	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTCTAGGAATGTTAA	-141635140	False	NA	-18	True	AATAAA	-26	NA	141635164	141620875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810
WTC11_00072845	chr5	-	1938	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	-5	0	0	multi-exon	FALSE	canonical	3	1022	junction_12	79.3570142727517	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTCTAGGAATGTTAA	-141631800	True	NA	-18	True	AATAAA	-26	NA	141636849	141620875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
WTC11_00072856	chr5	-	3188	2	FSM	ENSG00000197948.11	ENST00000520747.1	3181	2	0	-7	0	6	multi-exon	FALSE	canonical	3	124	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCTTCCTCCCAGGG	-141640283	False	NA	-4	True	AATAAA	-25	NA	141642621	141639295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141641564_141641701
WTC11_00072857	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	30.8784589054689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-141649080	True	NA	-10	True	AATAAA	-19	NA	141651418	141639301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
WTC11_00072865	chr5	-	5323	33	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-32	64	combination_of_known_junctions	FALSE	canonical	3	71	junction_32	34.9890607904814	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAGCATGAACAAAACAA	-141675885	True	NA	60	True	NA	NA	NA	141682262	141653336	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
WTC11_00072873	chr5	-	3886	4	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	-35	23027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	186.005376266386	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAGAAACAGAGGCAGA	-141864036	True	NA	NA	False	AAAAAG	-1	NA	141878445	141830062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141830089_141862653_141865428_141868568_141869432_141878222
WTC11_00072876	chr5	-	3828	3	FSM	ENSG00000156453.14	ENST00000394536.4	3827	3	0	-1	0	1	multi-exon	FALSE	canonical	3	390	junction_1	4.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCTTATTTTCTG	-141864001	True	NA	-2	True	AATAAA	-18	NA	141878410	141862650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141865428_141868568_141869432_141878222
WTC11_00072880	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	266.40991891812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-142003211	True	NA	-17	True	ATTAAA	-16	NA	142013030	142000673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
WTC11_00072881	chr5	-	2984	6	FSM	ENSG00000113552.16	ENST00000508177.5	2980	6	0	-4	0	0	multi-exon	FALSE	canonical	3	573	junction_3	47.0404081614945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-142012784	False	NA	-17	True	ATTAAA	-16	NA	142012794	142000673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911
WTC11_00072885	chr5	-	5037	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	-102	3	-82	0	multi-exon	TRUE	canonical	3	17	junction_2	0.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	-142313029	True	NA	-4	True	TATAAA	-31	NA	142325103	142310429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142315156_142319743_142319795_142324843
WTC11_00072886	chr5	-	4907	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	-3	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	-142312947	True	NA	-1	True	TATAAA	-34	NA	142325021	142310426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142315156_142324843
WTC11_00072888	chr5	-	6421	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	48	-3875	48	0	multi-exon	FALSE	canonical	2	8	junction_8	5.66651347832157	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGACTCCAACATG	-143404320	True	NA	-4	True	AATAAA	-15	NA	143404496	143277935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
WTC11_00072891	chr5	-	4982	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	32	-3912	0	0	multi-exon	FALSE	canonical	3	30	junction_6	18.8484828599664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	-145833790	True	NA	-1	True	AATAAA	-15	NA	145835304	145756343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
WTC11_00072894	chr5	-	7006	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	84	0	-84	multi-exon	FALSE	canonical	3	87	junction_27	307.093007988713	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAAGAATTGGCCAGT	-146160836	True	NA	NA	False	NA	NA	NA	146182650	146110649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072895	chr5	-	6903	31	FSM	ENSG00000133706.19	ENST00000674447.1	7147	31	0	244	0	-244	multi-exon	FALSE	canonical	1	10	junction_28	320.023764742558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGCCTAGAGACCAC	-146160836	True	NA	NA	False	NA	NA	NA	146182650	146110809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146172686_146172775_146177546_146177666_146182487
WTC11_00072897	chr5	-	7157	31	FSM	ENSG00000133706.19	ENST00000674309.1	7157	31	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	318.585012202395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160856	True	NA	-46	True	NA	NA	NA	146182670	146110565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072898	chr5	-	7331	32	FSM	ENSG00000133706.19	ENST00000674170.1	7331	32	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	315.823025035477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	-46	True	NA	NA	NA	146182683	146110565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149551_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072899	chr5	-	7855	31	FSM	ENSG00000133706.19	ENST00000674479.1	8108	31	9	244	-1	-244	multi-exon	FALSE	canonical	3	1217	junction_18	170.361057756754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGCCTAGAGACCAC	-146160847	True	NA	NA	False	NA	NA	NA	146182661	146110809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072901	chr5	-	4760	32	FSM	ENSG00000133706.19	ENST00000394434.7	4760	32	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_19	173.219859332045	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTATTCTTTTATTCT	-146160836	True	NA	-21	True	AATAAA	-23	NA	146182650	146113033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072902	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	9	-9	-1	0	multi-exon	FALSE	canonical	3	72	junction_6	303.179145346009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTATTCTTTTATTCT	-146160847	True	NA	-21	True	AATAAA	-23	NA	146182661	146113033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072904	chr5	-	3797	32	NIC	ENSG00000133706.19	novel	4760	32	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	83	junction_16	304.471935010695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGGTGTCCAAGAGAAA	-146160790	True	NA	-17	True	AATAAA	-15	NA	146182604	146113911	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144662_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
WTC11_00072911	chr5	-	10710	9	FSM	ENSG00000156475.19	ENST00000394409.7	10704	9	0	-6	0	6	multi-exon	FALSE	canonical	3	116	junction_8	18.2756668824971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCGGGTTTTTCTT	-146878632	False	NA	NA	False	ATTAAA	-21	NA	146878642	146581139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001
WTC11_00072912	chr5	-	10320	10	FSM	ENSG00000156475.19_ENSG00000280646.2	ENST00000530902.5	2093	10	137	-8364	0	6	multi-exon	FALSE	canonical	3	79	junction_9	27.0860539944019	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCGGGTTTTTCTT	-146877806	True	NA	NA	False	ATTAAA	-21	NA	146878757	146581139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
WTC11_00072913	chr5	-	10430	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	398	0	6	multi-exon	FALSE	canonical	0	0	junction_9	48.8648931010575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCGGGTTTTTCTT	-146877806	True	NA	NA	False	ATTAAA	-21	NA	146878757	146581139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
WTC11_00072918	chr5	-	5740	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	-432	1	-125	-1	multi-exon	FALSE	canonical	3	744	junction_13	113.023797043918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATTGTTCTCCAGTCT	-147454346	False	NA	-11	True	ATTAAA	-16	NA	147454391	147390811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
WTC11_00072919	chr5	-	5756	14	FSM	ENSG00000113657.13	ENST00000343218.10	5492	14	-268	4	-268	-1	multi-exon	FALSE	canonical	3	287	junction_13	215.664680552634	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATTGTTCTCCAGTCT	NA	False	NA	-11	True	ATTAAA	-16	NA	147510336	147390811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
WTC11_00072921	chr5	-	9132	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	21	0	-21	multi-exon	FALSE	canonical	3	9	junction_2	19.7081886131805	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTGCATTTTTTAAAA	-147782034	True	NA	NA	False	AATAAA	-1	NA	147782728	147585458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
WTC11_00072922	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	11.2587743560301	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	-147782754	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
WTC11_00072923	chr5	-	5166	9	ISM	ENSG00000176049.16	ENST00000333010.6	2992	21	139127	28760	558	12557	intron_retention	FALSE	canonical	3	67	junction_7	7.24137417898012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGTCTCAAAACAAAATA	-147643630	False	NA	NA	False	NA	NA	NA	147643641	147620121	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631
WTC11_00072924	chr5	-	1651	6	FSM	ENSG00000176049.16	ENST00000504845.1	575	6	-436	-640	-436	640	multi-exon	FALSE	canonical	2	10	junction_4	25.9183332797462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATATAAAGTATAAGAAA	-147644624	False	NA	NA	False	NA	NA	NA	147644635	147632038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147641707_147641765_147644057
WTC11_00072926	chr5	-	5282	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	-380	0	0	multi-exon	FALSE	canonical	0	0	junction_1	439.973175388828	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536956	True	NA	NA	False	AATAAA	-16	NA	149551397	149492981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
WTC11_00072927	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	523.08492618312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
WTC11_00072929	chr5	-	6070	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	-697	-2803	-630	0	multi-exon	FALSE	canonical	0	0	junction_1	588.018443588294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	NA	False	NA	NA	False	AATAAA	-16	NA	149552101	149492981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
WTC11_00072932	chr5	-	2229	11	NNC	ENSG00000113712.19	novel	2570	11	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	527.063041770147	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGATCTGGGATTTTGT	-149536935	True	NA	-19	True	GATAAA	-20	NA	149551376	149496068	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_149496861_149504680_149504736_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
WTC11_00072935	chr5	-	3491	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	2	0	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACTGTACATATTTTAA	-150000385	True	NA	NA	False	AATAAA	-23	NA	150000654	149993119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149996430_150000473
WTC11_00072937	chr5	-	822	3	FSM	ENSG00000113721.14	ENST00000517488.1	822	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCCCTTTCTGGCCT	-150155284	False	NA	NA	False	NA	NA	NA	150155627	150134749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150135017_150135554_150135879_150155396
WTC11_00072938	chr5	-	3112	2	FSM	ENSG00000183876.9	ENST00000328668.8	3113	2	0	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGATGCAGTGCTGT	-150302886	False	NA	-12	True	ATTAAA	-16	NA	150302905	150296343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150298613_150302062
WTC11_00072940	chr5	-	1287	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	-17	0	0	multi-exon	FALSE	canonical	3	290	junction_2	25.3175747621437	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGTAATTAGAACACTCT	-150409150	True	NA	-21	True	AATAAA	-2	NA	150412750	150401652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
WTC11_00072945	chr5	-	669	5	FSM	ENSG00000164587.13	ENST00000518139.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	15763.9001261585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150447673	False	212900	-28	True	AATAAA	-16	NA	150447735	150444237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150444478_150444642_150445608_150445686_150446801_150446964_150447584
WTC11_00072947	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	27622	junction_1	2023.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236827	True	NA	-28	True	AATAAA	-16	NA	150449727	150444237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150445608_150445686_150446801
WTC11_00072949	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	2	200	junction_5	43.3912433562349	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-150697640	True	NA	-6	True	ATTAAA	-17	NA	150701062	150690791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
WTC11_00072950	chr5	-	2067	4	FSM	ENSG00000086589.12	ENST00000520132.1	2067	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	8.73053390247253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTGTCATGGGTTTA	-150691411	False	NA	-8	True	ATTAAA	-15	NA	150694833	150690793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075
WTC11_00072951	chr5	-	989	7	FSM	ENSG00000086589.12	ENST00000522469.5	989	7	0	0	0	0	multi-exon	FALSE	canonical	2	200	junction_1	53.534256945125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGTGGCTGGGCACAG	-150697624	True	NA	NA	False	NA	NA	NA	150701046	150695323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
WTC11_00072953	chr5	-	660	5	FSM	ENSG00000086589.12	ENST00000521248.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	34.7670821323849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACATTTGCTCCTTCTG	-150697655	True	NA	NA	False	NA	NA	NA	150701077	150696594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
WTC11_00072955	chr5	-	4106	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	10	0	-10	multi-exon	FALSE	canonical	3	120	junction_4	14.4683562761405	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCCACCAGTGGCCA	-150755343	True	NA	NA	False	AATATA	-9	NA	150759017	150708449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
WTC11_00072956	chr5	-	379	3	FSM	ENSG00000132912.13	ENST00000522625.1	598	3	219	0	219	0	multi-exon	FALSE	canonical	3	148	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTAAGTATTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	150731575	150730634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150730741_150731043_150731157_150731415
WTC11_00072961	chr5	-	3318	7	FSM	ENSG00000145908.13	ENST00000446148.6	3323	7	17	-12	12	12	multi-exon	FALSE	non_canonical	1	20	junction_4	62.22182539556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTTGTGATCCTTT	-150902587	True	NA	-2	True	CATAAA	-40	NA	150904966	150894379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
WTC11_00072962	chr5	-	4547	5	NIC	ENSG00000145908.13	novel	3256	6	NA	NA	0	2	intron_retention	FALSE	canonical	3	39	junction_3	50.6482971085899	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTAATGTCTCTTCA	-150902599	True	NA	-19	True	CATAAA	-23	NA	150904978	150894396	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150898185_150898427_150898555_150903140_150903384_150903863_150903978_150904703
WTC11_00072963	chr5	-	3221	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	17	-12	12	12	multi-exon	FALSE	non_canonical	1	9	junction_3	72.5650570178237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTTGTGATCCTTT	-150902587	True	NA	-2	True	CATAAA	-40	NA	150904966	150894379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
WTC11_00072964	chr5	-	3301	18	FSM	ENSG00000145901.16	ENST00000521591.6	2870	18	-365	-66	-315	66	multi-exon	TRUE	canonical	3	129	junction_2	17.4020243025629	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTTCCCCTTTTCTT	-151081296	True	NA	59	True	NA	NA	NA	151081399	151029878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
WTC11_00072965	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_16	39.3200012716175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-151078577	True	NA	-7	True	CATAAA	-21	NA	151081016	151029944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
WTC11_00072966	chr5	-	2700	17	FSM	ENSG00000145901.16	ENST00000610535.5	2682	17	0	-18	0	2	multi-exon	FALSE	canonical	2	2	junction_2	40.8103464209752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCATGTTCATTTA	-151078615	True	NA	-5	True	CATAAA	-23	NA	151081054	151029942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032384_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
WTC11_00072967	chr5	-	2939	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	-4	0	2	multi-exon	FALSE	canonical	3	12	junction_2	38.1022118349159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCATGTTCATTTA	-151078645	True	NA	-5	True	CATAAA	-23	NA	151081084	151029942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
WTC11_00072969	chr5	-	2894	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	-5	0	5	multi-exon	FALSE	canonical	3	198	junction_17	23.9193979857353	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGGCCTCTGTCTTCT	-151146541	True	NA	NA	False	AATAAA	-32	NA	151157779	151100700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
WTC11_00072970	chr5	-	2472	25	NIC	ENSG00000197043.14	novel	2889	26	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	42.6555161210781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTGTCTGTACTTTG	-151146541	True	NA	-3	True	AAAACA	-23	NA	151157779	151101104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
WTC11_00072975	chr5	-	1580	4	FSM	ENSG00000113140.11	ENST00000520687.1	1598	4	18	0	18	0	multi-exon	FALSE	canonical	3	1129	junction_3	91.277355108239	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGAGTTTCACAAATCC	-151667537	False	NA	-54	True	AAAAAG	-37	NA	151667636	151662487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466
WTC11_00072978	chr5	-	423	2	FSM	ENSG00000177556.12	ENST00000522145.5	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151746546	False	NA	-5	True	AATAAA	-21	NA	151746563	151742821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151742960_151746278
WTC11_00072980	chr5	-	472	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	-1	0	1	multi-exon	FALSE	canonical	3	733	junction_3	70.3815000945245	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTCTTGCCTGGTCTT	-151753489	True	NA	-4	True	AATAAA	-22	NA	151758631	151742820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
WTC11_00072983	chr5	-	689	2	FSM	ENSG00000275765.6	ENST00000623943.2	1185	2	37	459	37	-459	multi-exon	FALSE	canonical	3	32	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTACAGATTAGT	-151771454	False	NA	NA	False	NA	NA	NA	151771471	151770241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151770773_151771313
WTC11_00072991	chr5	-	6601	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	-1197	0	1197	multi-exon	FALSE	canonical	3	135	junction_17	28.2139095369292	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCATCTCTACTAAAAA	-154933625	True	NA	NA	False	NA	NA	NA	154938211	154886213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
WTC11_00072993	chr5	-	3763	2	Antisense	novelGene_ENSG00000170624.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11	junction_1	0	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	156666882	156657796	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_156660487_156665809
WTC11_00072994	chr5	-	1267	3	Antisense	novelGene_ENSG00000170624.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTATACTTTGTCTCTG	-156666040	False	NA	NA	False	NA	NA	NA	156666051	156657803	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_156658768_156660391_156660453_156665809
WTC11_00072995	chr5	-	1214	2	Antisense	novelGene_ENSG00000170624.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTCTATACTTTGTC	-156666052	False	NA	NA	False	NA	NA	NA	156666063	156657807	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_156658768_156665809
WTC11_00072998	chr5	-	1847	12	FSM	ENSG00000135074.16	ENST00000517374.5	1847	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.93256703940854	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGGCAGCTCTTTA	-157502800	True	NA	0	True	ATTAAA	-29	NA	157502822	157477303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157477736_157481790_157481944_157488264_157488490_157489101_157489187_157490309_157490455_157491614_157491724_157491834_157491913_157492972_157493178_157494686_157494796_157496893_157497090_157499572_157499663_157502802
WTC11_00072999	chr5	-	6481	23	FSM	ENSG00000135074.16	ENST00000257527.9	6481	23	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	4.52449714113793	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGGCAGCTCTTTA	-157572126	True	NA	0	True	ATTAAA	-29	NA	157575775	157477303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157481003_157481790_157481944_157488264_157488490_157489101_157489187_157490309_157490455_157491614_157491724_157491834_157491913_157492972_157493178_157494686_157494796_157496893_157497090_157499572_157499663_157502802_157502981_157505668_157505809_157507055_157507141_157509300_157509468_157513433_157513506_157518822_157518889_157519838_157520032_157530806_157530884_157537912_157537992_157564372_157564444_157570894_157570981_157575602
WTC11_00073003	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	260.422320709971	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	-157843255	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
WTC11_00073010	chr5	-	322	1	FSM	ENSG00000223908.5	ENST00000520807.3	306	1	-76	60	-76	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCAAGGCACACATCAAA	NA	False	NA	NA	False	NA	NA	NA	160024121	160023799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160023800_160024100
WTC11_00073011	chr5	-	4346	3	ISM	ENSG00000170234.13	ENST00000456329.7	3991	4	24374	10	-1765	-10	3prime_fragment	FALSE	canonical	3	70	junction_2	17.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTAGTTATT	-160095034	False	NA	-14	True	AATAAA	-10	NA	160095049	160075891	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_160078169_160080650_160080771_160093100
WTC11_00073012	chr5	-	4007	4	FSM	ENSG00000170234.13	ENST00000456329.7	3991	4	0	-16	0	16	multi-exon	FALSE	canonical	3	70	junction_2	99.3210283206264	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTACTTTTTAGGAG	-160115609	True	NA	12	True	AATAAA	-36	NA	160119423	160075865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160078169_160080650_160080771_160093100_160094066_160118804
WTC11_00073014	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-160115636	True	NA	-2	True	AATAAA	-17	NA	160119450	160091338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160094066_160118804
WTC11_00073015	chr5	-	3415	3	FSM	ENSG00000170234.13	ENST00000520662.1	407	3	-589	-2419	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-160115608	True	NA	-2	True	AATAAA	-17	NA	160119422	160091338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160094066_160108544_160108615_160118804
WTC11_00073016	chr5	-	5871	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	8	-170	0	170	multi-exon	FALSE	canonical	3	146	junction_3	23.1948270094864	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCATGCCCGGCCAATT	-160309823	True	NA	NA	False	NA	NA	NA	160312556	160248912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
WTC11_00073017	chr5	-	3320	7	FSM	ENSG00000135083.17	ENST00000393977.7	3320	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	88.2263503092409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTCCTAGGCATCCC	-160309867	True	NA	-1	True	AATAAA	-26	NA	160312600	160251651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160276268_160276413_160280524_160280739_160311857_160311973_160312363
WTC11_00073019	chr5	-	940	6	FSM	ENSG00000135083.17	ENST00000519673.1	940	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.5110210112213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATTTGGTTGATATCAG	-160309743	True	NA	NA	False	NA	NA	NA	160312476	160254300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160254336_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
WTC11_00073021	chr5	-	3521	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	-41	0	41	multi-exon	FALSE	canonical	3	174	junction_10	24.2565913149853	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGGACAGGGAGGGGA	-160415827	True	NA	42	True	NA	NA	NA	160419081	160401599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
WTC11_00073026	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_3	56.0971379741328	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	-163450269	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
WTC11_00073028	chr5	-	676	3	FSM	ENSG00000170584.11	ENST00000521797.1	652	3	0	-24	0	0	multi-exon	FALSE	canonical	3	90	junction_2	633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGCTTACATTAGAG	-163459805	False	NA	NA	False	NA	NA	NA	163459836	163456963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_163457081_163457561_163457611_163459326
WTC11_00073029	chr5	-	745	1	FSM	ENSG00000254252.1	ENST00000520308.1	745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTACTT	NA	False	NA	NA	False	AATGAA	-5	NA	166029311	166028566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_166028600_166029300
WTC11_00073030	chr5	-	614	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	17	17	17	-17	multi-exon	FALSE	canonical	2	2	junction_1	5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCGACTATTCATAAAT	-167303248	True	NA	NA	False	TTTAAA	-34	NA	167303355	167296250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_167296544_167297462_167297551_167303122
WTC11_00073035	chr5	-	4484	13	FSM	ENSG00000072803.18	ENST00000296933.10	4539	13	55	0	55	0	multi-exon	FALSE	canonical	3	72	junction_12	36.4648803645371	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTGTTAAGAAATTTTT	-172006741	False	NA	-1	True	AATAAA	-18	NA	172006818	171861548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_172006457
WTC11_00073039	chr5	-	758	4	FSM	ENSG00000072803.18	ENST00000519693.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	63.2894584868251	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGAAAGAAGAGGGTGG	-171999773	True	NA	NA	False	NA	NA	NA	172006659	171899932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_171900101_171910571_171910798_171996889_171997052_172006457
WTC11_00073041	chr5	-	5889	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	3	0	-3	multi-exon	FALSE	canonical	2	71	junction_9	10.046957650189	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCCGTTCAGGTTGT	-172186817	True	NA	NA	False	AATAAA	-10	NA	172188224	172042081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
WTC11_00073046	chr5	-	382	2	Genic_Genomic	ENSG00000253683.1	novel	192	1	NA	NA	0	7179	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGGCTTTGCAGGAGT	-172656662	True	NA	NA	False	AAAAAG	-3	NA	172656713	172649342	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_172649380_172656368
WTC11_00073053	chr5	-	814	2	FSM	ENSG00000145919.11	ENST00000480951.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAACATAGCCAGTCC	-173607002	True	NA	NA	False	GATAAA	-11	NA	173616653	173607932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_173608293_173616199
WTC11_00073056	chr5	-	541	1	FSM	ENSG00000280068.1	ENST00000623875.1	498	1	-128	85	-128	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTTCAGCAGACACCA	NA	False	NA	NA	False	NA	NA	NA	175904499	175903958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_175904000_175904500
WTC11_00073058	chr5	-	1599	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	2	0	2	0	multi-exon	FALSE	canonical	3	1048	junction_1	73.8013550011109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	-175944298	True	NA	-5	True	AATAAA	-22	NA	175968313	175959530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
WTC11_00073060	chr5	-	1695	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	101	0	-101	multi-exon	FALSE	canonical	3	1080	junction_2	66.0776058888335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGCTCTGTCCTCCACTG	-175944265	True	NA	NA	False	NA	NA	NA	175968280	175960319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
WTC11_00073061	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	254.568261965234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355594	True	NA	-4	True	AATAAA	-22	NA	176361739	176346061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
WTC11_00073064	chr5	-	2634	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	-3	0	0	multi-exon	FALSE	canonical	1	3	junction_6	217.614656879744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355662	True	NA	-4	True	AATAAA	-22	NA	176361807	176346061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
WTC11_00073072	chr5	-	890	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	-9	0	9	multi-exon	FALSE	canonical	3	996	junction_1	87.0875995765184	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTATTTTTCTGCT	-176370375	True	NA	-2	True	AATAAA	-24	NA	176388598	176383936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
WTC11_00073073	chr5	-	963	5	FSM	ENSG00000048162.22	ENST00000621444.4	954	5	0	-9	0	9	multi-exon	FALSE	canonical	3	281	junction_1	390.634339888341	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTATTTTTCTGCT	-176388749	False	NA	-2	True	AATAAA	-24	NA	176388762	176383936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384284_176385220_176385328_176386839_176386910_176388234_176388344_176388432
WTC11_00073074	chr5	-	1087	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	476.938347692865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTGTGTACATAATAA	-176388914	False	NA	-46	True	NA	NA	NA	176388927	176383980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
WTC11_00073080	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	10.5445483544816	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-176413732	True	NA	NA	False	NA	NA	NA	176416539	176392500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
WTC11_00073082	chr5	-	3793	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	-320	10	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	38.236239354832	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTTTGGCTGCCCGT	-176536640	False	1065	-7	True	AATAAA	-28	NA	176536650	176526701	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176536462
WTC11_00073084	chr5	-	3787	11	NIC	ENSG00000146083.12	novel	4122	11	NA	NA	32	10	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	36.5306720441877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTTTGGCTGCCCGT	-176535593	True	NA	-7	True	AATAAA	-28	NA	176537848	176526701	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176537730
WTC11_00073085	chr5	-	3806	11	NIC	ENSG00000146083.12	novel	1647	11	NA	NA	-51	10	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	36.4219713909063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTTTGGCTGCCCGT	-176537921	False	NA	-7	True	AATAAA	-28	NA	176537931	176526701	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176537730
WTC11_00073086	chr5	-	848	5	FSM	ENSG00000146083.12	ENST00000506378.1	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	27.6902509920008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCCCCTTCGCTCCT	-176528390	False	174	NA	False	NA	NA	NA	176530645	176528938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581
WTC11_00073087	chr5	-	1572	11	FSM	ENSG00000146083.12	ENST00000513029.5	1647	11	94	-19	-51	0	multi-exon	FALSE	canonical	3	8	junction_9	45.055632278329	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCCCCTTCGCTCCT	-176537921	False	NA	NA	False	NA	NA	NA	176537931	176528938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532133_176532365_176532517_176537730
WTC11_00073089	chr5	-	887	5	FSM	ENSG00000146083.12	ENST00000504160.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	18.6999331549607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCACCACCGGCCCCA	-176528289	True	NA	NA	False	NA	NA	NA	176537296	176530936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176536939
WTC11_00073090	chr5	-	785	2	FSM	ENSG00000146083.12	ENST00000504434.1	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTACAGGTAGGTAAAC	-176535625	True	NA	NA	False	NA	NA	NA	176537880	176531881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176532517_176537730
WTC11_00073091	chr5	-	4238	2	FSM	ENSG00000169258.7	ENST00000303991.5	4234	2	0	-4	0	4	multi-exon	FALSE	canonical	3	68	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCGTGATTGGCCAA	-176609272	True	NA	-1	True	AATAAA	-17	NA	176610156	176595797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176599878_176609998
WTC11_00073093	chr5	-	1432	6	FSM	ENSG00000074317.11	ENST00000510387.5	730	6	-107	-595	-53	-2	multi-exon	FALSE	canonical	3	19	junction_5	35.319116636745	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGCCACCTCTGGCT	-176629389	False	NA	NA	False	NA	NA	NA	176630101	176620085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808
WTC11_00073094	chr5	-	1394	6	FSM	ENSG00000074317.11	ENST00000393693.7	1398	6	0	4	0	-2	multi-exon	FALSE	canonical	3	83	junction_5	12.3190908755476	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGCCACCTCTGGCT	-176629822	True	NA	NA	False	NA	NA	NA	176630534	176620085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176630279
WTC11_00073096	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.3142518871856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	-177004382	False	NA	35	True	AATAGA	-14	NA	177006408	176905004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
WTC11_00073100	chr5	-	2622	15	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.9673765205524	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTAAATATATTTA	-177004750	True	NA	-26	True	NA	NA	NA	177006776	176905065	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
WTC11_00073106	chr5	-	1594	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	-6	0	6	multi-exon	FALSE	canonical	3	160	junction_3	24.5381834898102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTGACTAGCTCTACT	-177301332	True	NA	-22	True	AATAAA	-29	NA	177303719	177301191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
WTC11_00073107	chr5	-	1821	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	5	-6	5	6	multi-exon	FALSE	canonical	3	182	junction_5	20.2210011841375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTGACTAGCTCTACT	-177301341	True	NA	-22	True	AATAAA	-29	NA	177303728	177301191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
WTC11_00073108	chr5	-	1609	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	-1	0	0	multi-exon	FALSE	canonical	3	182	junction_5	19.2603219080056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301294	True	NA	-5	True	AATAAA	-22	NA	177303681	177301450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
WTC11_00073109	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	54.3179298206403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301319	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
WTC11_00073113	chr5	-	1534	5	FSM	ENSG00000213347.11	ENST00000423571.6	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	9.66953980290686	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCCGGGCAAGTCACC	-177311384	False	511	NA	False	NA	NA	NA	177311895	177306816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
WTC11_00073114	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	99	junction_5	9.2217135067188	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	-177311798	True	NA	-5	True	ATTAAA	-20	NA	177312309	177307204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
WTC11_00073122	chr5	-	966	3	FSM	ENSG00000131187.10	ENST00000504406.5	943	3	0	-23	0	1	multi-exon	FALSE	canonical	3	90	junction_2	15	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGCTCTTTTCTTCA	-177403685	False	NA	-4	True	AATAAA	-20	NA	177403750	177402139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177402460_177402549_177402699_177403253
WTC11_00073123	chr5	-	1500	5	FSM	ENSG00000131187.10	ENST00000502854.5	1480	5	0	-20	0	1	multi-exon	FALSE	canonical	3	36	junction_4	31.9873021682042	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGCTCTTTTCTTCA	-177404407	False	NA	-4	True	AATAAA	-20	NA	177404472	177402139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177404091_177404195
WTC11_00073124	chr5	-	1948	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	-375	0	134	0	multi-exon	FALSE	canonical	3	90	junction_2	12.2836838484589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	NA	False	NA	-36	True	NA	NA	NA	177404847	177402171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
WTC11_00073126	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	93.625655210575	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	-177473601	False	NA	-39	True	AATAAA	-19	NA	177473741	177456607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
WTC11_00073127	chr5	-	2998	15	FSM	ENSG00000113758.14	ENST00000292385.9	3072	15	74	0	74	0	multi-exon	FALSE	canonical	1	6	junction_14	382.931362741978	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCCTCCCCGCCCTTCT	-177472984	False	NA	-24	True	AATAAA	-26	NA	177473124	177456926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177472118_177472398_177472775
WTC11_00073128	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	97.4016241593993	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	-177447954	True	NA	-31	True	AATAAA	-19	NA	177473624	177456933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
WTC11_00073130	chr5	-	1044	10	FSM	ENSG00000113758.14	ENST00000477391.6	1044	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	316.566923862792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTAGGCCCCACCCC	-177447943	True	NA	NA	False	NA	NA	NA	177473613	177460431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468218_177468843_177468900_177473435
WTC11_00073133	chr5	-	2216	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	-530	0	530	multi-exon	FALSE	canonical	3	125	junction_8	115.940864338975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-177488849	True	NA	NA	False	NA	NA	NA	177497561	177482863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
WTC11_00073134	chr5	-	2242	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	-530	0	530	multi-exon	FALSE	canonical	3	222	junction_6	94.4952600222184	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-177488892	True	NA	NA	False	NA	NA	NA	177497604	177482863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
WTC11_00073135	chr5	-	1542	3	FSM	ENSG00000196923.14	ENST00000504380.1	556	3	-686	-300	-145	-1	multi-exon	FALSE	canonical	3	315	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGTGCCCTTCCCCT	-177485107	False	NA	-7	True	AATAAA	-16	NA	177485159	177483394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177483731_177483866_177483983_177484069
WTC11_00073136	chr5	-	2468	13	NIC	ENSG00000196923.14	novel	1904	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	91.5646022701398	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTGTGCCCTTCCCC	-177488889	True	NA	-8	True	AATAAA	-15	NA	177497601	177483395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
WTC11_00073138	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	108.375951847149	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	-177488861	True	NA	-19	True	AATAAA	-15	NA	177497573	177490245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
WTC11_00073145	chr5	-	2317	5	ISM	ENSG00000146094.16	ENST00000357198.9	1729	6	-137	-307	-137	307	intron_retention	FALSE	canonical	3	7	junction_3	3.03108891324554	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTCGTCCAAAACACTT	-177509973	False	NA	NA	False	NA	NA	NA	177509994	177503442	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_177504661_177504742_177504916_177505010_177505111_177508236_177508543_177509474
WTC11_00073149	chr5	-	2376	16	FSM	ENSG00000183258.12	ENST00000503078.5	2375	16	0	-1	0	0	multi-exon	FALSE	canonical	3	260	junction_15	49.1960251330216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-177508085	True	NA	-12	True	ATTAAA	-19	NA	177516961	177511576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516836_177516918
WTC11_00073150	chr5	-	1587	11	FSM	ENSG00000183258.12	ENST00000507900.5	1564	11	0	-23	0	0	multi-exon	FALSE	canonical	3	342	junction_7	33.7111257599031	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-177515323	False	NA	-12	True	ATTAAA	-19	NA	177515333	177511576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185
WTC11_00073151	chr5	-	2094	16	FSM	ENSG00000183258.12	ENST00000652623.1	2094	16	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_14	39.9929993873928	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTACTGTTTTTGTTTC	-177508058	True	NA	-73	True	NA	NA	NA	177516934	177511637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724
WTC11_00073152	chr5	-	552	3	FSM	ENSG00000183258.12	ENST00000513562.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	22.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTGCTAAGAGTGCCC	-177515029	False	NA	NA	False	NA	NA	NA	177515039	177513434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177513485_177513684_177513848_177514700
WTC11_00073158	chr5	-	4507	10	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	0	218	intron_retention	FALSE	canonical	3	56	junction_9	69.5660269008187	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCATCTGTGCCCTTTTC	-177552429	True	NA	NA	False	NA	NA	NA	177554563	177519570	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177553167
WTC11_00073162	chr5	-	2803	10	FSM	ENSG00000146067.16	ENST00000510479.5	2800	10	0	-3	0	2	multi-exon	FALSE	canonical	3	27	junction_8	87.3460550530666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTTGGTGATTTGTG	NA	False	NA	3	True	GATAAA	-21	NA	177539066	177519786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177531952_177532201_177532442_177532642_177536357_177536487_177537872_177538108_177538904
WTC11_00073163	chr5	-	2970	9	FSM	ENSG00000146067.16	ENST00000514747.6	2968	9	0	-2	0	2	multi-exon	FALSE	canonical	3	43	junction_4	77.4167900070779	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTTGGTGATTTGTG	-177552429	True	NA	3	True	GATAAA	-21	NA	177554563	177519786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177554248
WTC11_00073171	chr5	-	1344	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	-564	0	564	multi-exon	FALSE	canonical	3	5726	junction_2	248.741275670569	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTCAGATCTGGTTAAAA	-178117989	True	NA	NA	False	AATAAA	-21	NA	178153885	178148898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
WTC11_00073176	chr5	-	1975	10	FSM	ENSG00000175309.15	ENST00000481436.5	2025	10	50	0	50	0	multi-exon	FALSE	canonical	3	6	junction_6	34.9595886632863	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAATATACTTACTCCT	-178223984	False	NA	85	True	ATTAAA	-17	NA	178226029	178208498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222493_178222851_178222935_178224447_178224565_178224641_178224730_178225354
WTC11_00073178	chr5	-	1970	7	FSM	ENSG00000175309.15	ENST00000476487.5	2251	7	281	0	-233	0	multi-exon	FALSE	canonical	3	83	junction_6	15.4668103441602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGTTTCCTAAGATAC	-178222684	False	NA	NA	False	ATTAAA	-17	NA	178224729	178210967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447
WTC11_00073180	chr5	-	562	4	FSM	ENSG00000175309.15	ENST00000511716.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.2858495669176	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTAGTTTTGTGAG	-178230496	False	NA	-10	True	AATAAA	-12	NA	178232541	178226465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178226699_178229939_178230100_178231404_178231524_178232491
WTC11_00073181	chr5	-	2782	4	FSM	ENSG00000175309.15	ENST00000476170.2	824	4	-272	-1686	-41	27	multi-exon	FALSE	canonical	3	21	junction_1	42.2873766297015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAATTGAACCTACAGAG	-178230798	True	NA	17	True	AATAAA	-39	NA	178232843	178226438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178228590_178229939_178230100_178231404_178231524_178232491
WTC11_00073183	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	24.4237759843423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625302	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
WTC11_00073189	chr5	-	6311	10	NNC	ENSG00000250420.8	novel	2822	11	NA	NA	-2534	-2	intron_retention	FALSE	canonical	3	20	junction_2	11.6216061022159	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGCTGTGGACTATA	-178820954	False	NA	-5	True	AATAAA	-23	NA	178820969	178764862	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_178767336_178768469_178768668_178772428_178772632_178774497_178774549_178775266_178775337_178776141_178776277_178797530_178797612_178811173_178811287_178814897_178815009_178818093
WTC11_00073190	chr5	-	6505	21	ISM	ENSG00000087116.16	ENST00000251582.12	6783	22	1306	0	1275	0	3prime_fragment	FALSE	canonical	2	9	junction_10	5.30353655592191	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCGTTTGTTGTTGTC	-179343919	False	236	0	True	ATTAAA	-29	NA	179344155	179110852	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_179114325_179121660_179121751_179122643_179122774_179124972_179125181_179125997_179126131_179127958_179128119_179129931_179130099_179132229_179132311_179132776_179132901_179135908_179136043_179137768_179137945_179139889_179140036_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766
WTC11_00073191	chr5	-	256	3	FSM	ENSG00000087116.16	ENST00000523450.1	322	3	66	0	66	0	multi-exon	FALSE	canonical	3	11	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAAGTCTTGTCCCGC	NA	False	NA	NA	False	NA	NA	NA	179122773	179114288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179114325_179121660_179121751_179122643
WTC11_00073192	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_13	77.8238034196365	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605489	True	NA	-1	True	AATAAA	-21	NA	179623710	179614177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
WTC11_00073193	chr5	-	3666	13	FSM	ENSG00000169045.17	ENST00000356731.9	3667	13	0	1	0	0	multi-exon	FALSE	canonical	3	217	junction_10	60.404826426003	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTTGTCTGTGCT	-179624502	False	NA	-3	True	AATAAA	-19	NA	179624669	179614179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
WTC11_00073194	chr5	-	2249	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_13	79.9897922481696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179623710	False	NA	-1	True	AATAAA	-21	NA	179623721	179614177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
WTC11_00073195	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	92.8009511208028	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623157	False	NA	-4	True	AATAAA	-18	NA	179623168	179614180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
WTC11_00073196	chr5	-	2105	12	FSM	ENSG00000169045.17	ENST00000510411.5	2105	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	99.9356817951815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623158	False	NA	-4	True	AATAAA	-18	NA	179623169	179614180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179617020_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
WTC11_00073197	chr5	-	5564	4	FSM	ENSG00000169045.17	ENST00000515481.5	5564	4	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	17.5562587763516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTTGTCTGTGCT	-179620021	False	NA	-3	True	AATAAA	-19	NA	179620032	179614179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179617650_179617798_179617933_179617988_179618061_179618144
WTC11_00073201	chr5	-	997	4	FSM	ENSG00000169045.17	ENST00000524180.5	997	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	119.049009515689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGCTTGTGATGTTA	-179623153	False	NA	NA	False	TTTAAA	-17	NA	179623164	179619468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179620038_179620891_179621036_179621241_179621398_179623036
WTC11_00073207	chr5	-	3027	14	FSM	ENSG00000161013.17	ENST00000337755.9	3027	14	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_12	39.1525615627264	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCGCCCTGGGCATCT	-179802875	False	NA	-22	True	AATAAA	-26	NA	179802998	179797596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799311_179799505_179799637_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783
WTC11_00073208	chr5	-	2378	15	FSM	ENSG00000161013.17	ENST00000292591.12	2365	15	0	-13	0	0	multi-exon	FALSE	canonical	3	241	junction_14	42.3853194646737	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCGCCCTGGGCATCT	-179803573	True	NA	-22	True	AATAAA	-26	NA	179806866	179797596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799311_179799505_179799637_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783_179801970_179806486
WTC11_00073214	chr5	-	2879	9	FSM	ENSG00000161010.16	ENST00000522663.5	2879	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	60.609276311469	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGTCTGGGATGTGAG	-179856676	True	NA	NA	False	NA	NA	NA	179858860	179835132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
WTC11_00073217	chr5	-	558	2	FSM	ENSG00000161010.16	ENST00000518950.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAAGAGACCAGGAGGC	NA	False	NA	NA	False	TTTAAA	-35	NA	179838255	179837142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837205_179837759
WTC11_00073218	chr5	-	4155	6	FSM	ENSG00000161010.16	ENST00000518219.5	4145	6	0	-10	0	0	multi-exon	FALSE	canonical	3	122	junction_4	19.3142434488126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856624	True	NA	-6	True	AATAAA	-25	NA	179858808	179837265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
WTC11_00073219	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	65.3466716826496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856624	True	NA	-6	True	AATAAA	-25	NA	179858808	179837265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
WTC11_00073220	chr5	-	1207	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	-43	4	0	-4	multi-exon	FALSE	canonical	3	122	junction_5	20.9980157792746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTCTCTCTATGCAAA	-179856676	True	NA	-20	True	AATAAA	-11	NA	179858860	179837279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
WTC11_00073221	chr5	-	1106	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	-10	0	0	multi-exon	FALSE	canonical	3	16	junction_4	57.6298533747918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856650	True	NA	-6	True	AATAAA	-25	NA	179858834	179837265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
WTC11_00073222	chr5	-	1054	4	FSM	ENSG00000161010.16	ENST00000520150.5	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	75.1457842389637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCGCAGTGGCTCAC	-179856662	True	NA	NA	False	TTTAAA	-15	NA	179858846	179840239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179840960_179841906_179842065_179853377_179853438_179858730
WTC11_00073223	chr5	-	559	5	FSM	ENSG00000161010.16	ENST00000523737.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	64.4224339807182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTCACAGTTGACGAA	-179856660	True	NA	NA	False	NA	NA	NA	179858844	179840808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
WTC11_00073225	chr5	-	579	6	FSM	ENSG00000161010.16	ENST00000519213.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	72.7554808931946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGGAATGTGAAGCAGC	-179856660	True	NA	NA	False	AAGAAA	-41	NA	179858844	179844173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179844228_179847977_179848067_179851242_179851425_179853196_179853277_179853377_179853438_179858730
WTC11_00073226	chr5	-	5141	22	NNC	ENSG00000197226.13	novel	5173	22	NA	NA	0	14904	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.1807107271513	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAACTCTCAGAGGTC	-179901228	True	NA	NA	False	NA	NA	NA	179907859	179847161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_179847189_179862073_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
WTC11_00073229	chr5	-	5183	22	FSM	ENSG00000197226.13	ENST00000356834.7	5173	22	0	-10	0	10	multi-exon	FALSE	canonical	3	21	junction_3	74.0984819953392	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGTCTCACAATATCT	-179901228	True	NA	-16	True	AATAAA	-36	NA	179907859	179862055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867444_179867496_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
WTC11_00073230	chr5	-	5170	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	-15	0	10	multi-exon	FALSE	canonical	3	218	junction_13	26.6448400257911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGTCTCACAATATCT	-179901266	True	NA	-16	True	AATAAA	-36	NA	179907897	179862055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
WTC11_00073239	chr5	-	2460	7	ISM	ENSG00000197226.13	ENST00000356834.7	5173	22	0	24869	0	736	5prime_fragment	FALSE	canonical	3	224	junction_1	30.2085344820889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGGCCAGAGGGGCT	-179901228	True	NA	42	True	NA	NA	NA	179907859	179886934	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
WTC11_00073240	chr5	-	9943	8	FSM	ENSG00000113269.14	ENST00000522208.6	9945	8	0	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_1	242.183182482911	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACCACATGGAGTAT	-180067234	True	NA	-1	True	AATAAA	-18	NA	180071721	179911652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179920427_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
WTC11_00073241	chr5	-	1851	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	53	0	-53	multi-exon	FALSE	canonical	3	590	junction_1	42.731538411342	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGAGTGCTTTGCACA	-180067272	True	NA	NA	False	NA	NA	NA	180071759	179955119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
WTC11_00073242	chr5	-	1766	8	FSM	ENSG00000113269.14	ENST00000261947.4	1766	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	217.875736911419	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGAGGGCTG	-180071192	True	NA	1	True	AATAAA	-42	NA	180072101	179955452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179955670_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
WTC11_00073243	chr5	-	314	2	FSM	ENSG00000113269.14	ENST00000521901.5	663	2	349	0	349	0	multi-exon	FALSE	canonical	3	590	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTTGAGTCTTA	-179963575	False	NA	-26	True	AATAAA	-15	NA	179963594	179955479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179955670_179963470
WTC11_00073244	chr5	-	4330	12	FSM	ENSG00000050748.18	ENST00000393360.7	4326	12	0	-4	0	4	multi-exon	FALSE	canonical	3	44	junction_1	83.740745140548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGTCCAATTTTTGTG	-180289507	True	NA	-10	True	GATAAA	-5	NA	180292056	180233589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
WTC11_00073247	chr5	-	4372	12	FSM	ENSG00000050748.18	ENST00000343111.10	4369	12	1	-4	1	4	multi-exon	FALSE	canonical	3	9	junction_5	139.290943503692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGTCCAATTTTTGTG	-180289549	True	NA	-10	True	GATAAA	-5	NA	180292098	180233589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247854_180247927_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
WTC11_00073248	chr5	-	2142	13	NIC	ENSG00000050748.18	novel	4799	12	NA	NA	0	410	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	111.047631171893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATGTTTGGGGCTGA	-180289418	True	NA	1	True	AATAAA	-25	NA	180291967	180235776	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_180236527_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180286974_180287068_180291847
WTC11_00073252	chr5	-	2266	7	FSM	ENSG00000050748.18	ENST00000425491.6	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	6.91415617089718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAACATTAATGTCAG	-180289418	True	NA	NA	False	ATTAAA	-13	NA	180291967	180246027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
WTC11_00073261	chr5	-	4517	30	FSM	ENSG00000037280.16	ENST00000393347.7	4292	30	-5	-220	-5	220	multi-exon	TRUE	canonical	3	16	junction_21	16.4234251657078	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATGTCCATGATCATC	-180649160	True	NA	-2	True	ATTAAA	-30	NA	180649629	180607744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180608285_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
WTC11_00073265	chr5	-	8441	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	4	0	-2	multi-exon	FALSE	canonical	3	306	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGCCCTGCCCAGATTAA	-180799458	True	NA	NA	False	AATAAA	-22	NA	180802806	180784783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180802679
WTC11_00073267	chr5	-	3175	3	FSM	ENSG00000131446.17	ENST00000446023.6	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	55	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	-180808605	True	NA	-7	True	AATAAA	-15	NA	180809829	180790547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180808647_180809077_180809633
WTC11_00073268	chr5	-	3067	3	FSM	ENSG00000131446.17	ENST00000393340.7	3077	3	10	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	10.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	-180809145	True	NA	-7	True	AATAAA	-15	NA	180810127	180790547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180808647_180809077_180810039
WTC11_00073272	chr5	-	1781	1	FSM	ENSG00000278970.3	ENST00000691539.1	1665	1	-117	1	-117	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTTATTTTCTTTGGT	-180831718	False	NA	-1	True	AGTAAA	-20	NA	180831735	180829954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180830000_180831700
WTC11_00073273	chr5	-	4628	2	FSM	ENSG00000196670.14	ENST00000504225.1	749	2	-579	-3300	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGGCTGTGAGTTTAG	-180858631	True	NA	-40	True	AATAAA	-16	NA	180861276	180847614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180851494_180860527
WTC11_00073274	chr5	-	4068	3	NNC	ENSG00000196670.14	novel	3941	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_2	40	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_180851494_180860527_180860655_180861218
WTC11_00073275	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180851494_180861218
WTC11_00073276	chr5	-	4014	3	FSM	ENSG00000196670.14	ENST00000512132.5	4010	3	0	-4	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180851494_180851987_180852061_180861218
WTC11_00073278	chr5	-	889	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	-1	0	0	multi-exon	FALSE	canonical	3	11382	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGTTTTTTTTTCTTA	-181238153	False	364	-7	True	AATAAA	-22	NA	181238195	181236927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237720_181238098
WTC11_00073279	chr5	-	791	3	FSM	ENSG00000204628.12	ENST00000514455.5	791	3	0	0	0	0	multi-exon	FALSE	canonical	3	8776	junction_1	1303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGTTTTTTTTTCTTA	-181238621	False	NA	-7	True	AATAAA	-22	NA	181238663	181236927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098
WTC11_00073280	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	3733.40043064097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	-181103462	True	NA	-5	True	AATAAA	-24	NA	181243889	181236925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
WTC11_00073281	chr5	-	1140	8	FSM	ENSG00000204628.12	ENST00000512805.6	1140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3741.96475184917	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTCTATCTACATTG	-181103479	True	NA	24	True	NA	NA	NA	181243906	181236896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
WTC11_00073282	chr5	-	1162	8	FSM	ENSG00000204628.12	ENST00000511473.5	1150	8	0	-12	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4542.10382343437	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTCTATCTACATTG	-181103489	True	NA	24	True	NA	NA	NA	181243916	181236896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243679
WTC11_00073283	chr5	-	1667	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	-16	0	0	multi-exon	FALSE	canonical	3	8776	junction_1	823.336234812701	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	-181103520	True	NA	15	True	AATAAA	-5	NA	181243947	181236944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
WTC11_00073286	chr5	-	2421	1	FSM	ENSG00000183718.6	ENST00000612671.1	4753	1	3572	-1240	2627	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCTTTCATTAATTTC	-181257519	False	NA	0	True	AATAAA	-20	NA	181257567	181255146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181255100_181257600
WTC11_00073287	chr5	+	1742	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTGTTCTGAAGTCT	NA	False	NA	13	True	ATTAAA	-26	NA	340688	342430	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_340700_342400
WTC11_00073288	chr5	+	766	1	NIC	ENSG00000289088.1	novel	837	2	NA	NA	532	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTTGGTGTGTTCTT	693941	False	NA	NA	False	AAGAAA	-12	NA	694060	694826	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_694100_694800
WTC11_00073289	chr5	+	1806	1	FSM	ENSG00000288967.1	ENST00000688058.1	1301	1	28	-533	28	533	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCACAGTGTTTTGCTA	12624162	True	NA	NA	False	NA	NA	NA	12625002	12626808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_12625000_12626800
WTC11_00073290	chr5	+	3544	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAATAGCTGGAATTAC	NA	False	NA	NA	False	NA	NA	NA	14202309	14205853	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14202300_14205900
WTC11_00073292	chr5	+	8395	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGAGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	18644953	18653348	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18645000_18653300
WTC11_00073293	chr5	+	314	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTTTTAGTAATAAATT	NA	False	NA	NA	False	AATAAA	-21	NA	18875564	18875878	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18875600_18875900
WTC11_00073294	chr5	+	232	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCGAGGTTGCGCCACT	NA	False	NA	NA	False	NA	NA	NA	46164007	46164239	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_46164000_46164200
WTC11_00073295	chr5	+	277	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCCTTTTAAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	57137931	57138208	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_57137900_57138200
WTC11_00073296	chr5	+	1929	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCTTCACTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	69978693	69980622	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_69978700_69980600
WTC11_00073297	chr5	+	2475	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAACATTTAAAATTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	71069794	71072269	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_71069800_71072300
WTC11_00073298	chr5	+	991	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAAAGCAACCAAAACT	NA	False	NA	NA	False	TATAAA	-18	NA	71073100	71074091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_71073100_71074100
WTC11_00073300	chr5	+	301	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGAATTTATCTGAAGA	NA	False	NA	NA	False	AATGAA	-3	NA	76241182	76241483	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76241200_76241500
WTC11_00073302	chr5	+	567	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCCAAACAACTTGACC	76360360	False	NA	NA	False	NA	NA	NA	76360380	76360947	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76360400_76360900
WTC11_00073303	chr5	+	365	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACCCCTTACCATAAGA	76362042	False	NA	NA	False	NA	NA	NA	76362062	76362427	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76362100_76362400
WTC11_00073305	chr5	+	1015	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGCAAAATCTCTGAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	87931472	87932487	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_87931500_87932500
WTC11_00073306	chr5	+	304	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCAGATCATTTTCAA	NA	False	NA	NA	False	NA	NA	NA	90365935	90366239	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_90365900_90366200
WTC11_00073307	chr5	+	286	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTCTCCCTGCTGATCG	NA	False	NA	NA	False	CATAAA	-7	NA	92827128	92827414	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_92827100_92827400
WTC11_00073308	chr5	+	233	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTACAGAGAAGTGTCTC	NA	False	NA	NA	False	AATACA	-5	NA	98577559	98577792	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_98577600_98577800
WTC11_00073309	chr5	+	3464	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGCGTTGAATAACAA	NA	False	NA	NA	False	NA	NA	NA	102766930	102770394	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_102766900_102770400
WTC11_00073311	chr5	+	242	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTGCACCTTATCAACC	NA	False	NA	NA	False	NA	NA	NA	108552165	108552407	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108552200_108552400
WTC11_00073312	chr5	+	273	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCTCATTCCAGACAC	NA	False	NA	NA	False	NA	NA	NA	108553683	108553956	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108553700_108554000
WTC11_00073313	chr5	+	596	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTACCTACCCAAATCC	NA	False	NA	NA	False	NA	NA	NA	108554267	108554863	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108554300_108554900
WTC11_00073314	chr5	+	1471	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATATCACAAACCTTAGC	115914842	False	NA	NA	False	TATAAA	-31	NA	115914854	115916325	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_115914900_115916300
WTC11_00073315	chr5	+	214	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTAGTTTTATTTAAT	NA	False	NA	NA	False	ATTAAA	-33	NA	117049812	117050026	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_117049800_117050000
WTC11_00073316	chr5	+	812	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAAGTTGGCACCAGA	NA	False	NA	NA	False	AAAAAG	-5	NA	118949430	118950242	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_118949400_118950200
WTC11_00073317	chr5	+	4352	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTTGGAATTTTTT	122033807	False	NA	8	True	AATAAA	-20	NA	122033819	122038171	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122033800_122038200
WTC11_00073319	chr5	+	1757	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGTGAGTAGCCTCCG	NA	False	NA	NA	False	NA	NA	NA	122474983	122476740	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122475000_122476700
WTC11_00073321	chr5	+	839	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAGGGATAGCGAGGGA	NA	False	NA	NA	False	NA	NA	NA	122477693	122478532	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122477700_122478500
WTC11_00073326	chr5	+	477	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGAGTCCTGGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	143334157	143334634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_143334200_143334600
WTC11_00073327	chr5	+	4861	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTATTTGGTTAA	146290894	False	NA	NA	False	AATGAA	-35	NA	146290911	146295772	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_146290900_146295800
WTC11_00073328	chr5	+	591	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGGCTTGGAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	153449997	153450588	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_153450000_153450600
WTC11_00073331	chr5	+	287	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGGACTCTTAATTCG	NA	False	NA	NA	False	NA	NA	NA	176172876	176173163	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_176172900_176173200
WTC11_00073332	chr5	+	222	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTTTTGGATGAATTGAG	NA	False	NA	NA	False	AAGAAA	-37	NA	180416190	180416412	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_180416200_180416400
WTC11_00073336	chr5	+	293	1	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	181220862	181221155	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_181220900_181221200
WTC11_00073337	chr5	+	2904	12	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38134	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	95.4294339263528	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	53736	True	NA	18	True	AATAAA	-29	NA	54033	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_54175_89997_90120_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00073338	chr5	+	7466	21	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-54	2313	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	97.6139718482964	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAACGTATCTGCGGTT	86742	True	NA	NA	False	AATAAA	-29	NA	92113	184902	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_92277_113250_113449_139482_140110_140224_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721_163549_169339_169593_171042_171133_171213_171445_172896_173068_173917_174099_181513_181676_182003
WTC11_00073339	chr5	+	2260	8	ISM	ENSG00000153404.15	ENST00000502646.1	1360	9	1430	0	1430	0	3prime_fragment	FALSE	canonical	3	239	junction_2	21.1032447451929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	141982	False	NA	18	True	AATAAA	-29	NA	141995	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00073340	chr5	+	1049	5	NIC	ENSG00000249915.9	novel	1110	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	31	junction_1	333.022803273289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCAGCTTTTCAA	262928	True	NA	19	True	AATAAA	-19	NA	271645	314975	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
WTC11_00073341	chr5	+	5667	11	FSM	ENSG00000063438.20	ENST00000684583.1	5661	11	-10	4	-10	-4	multi-exon	FALSE	canonical	2	8	junction_1	3.20156211871642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTAAATGTTTGCGGA	321559	True	NA	NA	False	AATACA	-25	NA	321703	438281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_321820_343892_343965_353729_353912_376609_376717_413343_413434_422728_422859_423840_423978_427806_428007_432462_432525_432805_432948_433852
WTC11_00073351	chr5	+	484	1	FSM	ENSG00000271781.1	ENST00000607068.1	791	1	-3	310	-3	-310	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGACACATGTGACATC	NA	False	NA	NA	False	NA	NA	NA	675822	676306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_675800_676300
WTC11_00073353	chr5	+	4260	1	Genic_Genomic	ENSG00000286388.1	novel	NA	NA	NA	NA	1346	16	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGAGTTTTGACAAATG	NA	False	NA	24	True	TATAAA	-25	NA	1346542	1350802	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_1346500_1350800
WTC11_00073355	chr5	+	411	2	FSM	ENSG00000249116.2	ENST00000506335.2	432	2	16	5	16	4	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTCTGAATTCTGT	1883947	False	NA	13	True	TATAAA	-24	NA	1883979	1884649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1884221_1884479
WTC11_00073356	chr5	+	2604	2	FSM	ENSG00000248994.2	ENST00000669344.1	2692	2	0	88	0	-88	multi-exon	FALSE	canonical	2	5	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTAGTGCTTTGTTA	1930982	True	NA	NA	False	NA	NA	NA	1931063	1936086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1931390_1933808
WTC11_00073358	chr5	+	5154	12	NIC	ENSG00000112941.14	novel	5030	13	NA	NA	-253	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	25.9245567874959	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTGTGTCCAAG	6713160	False	NA	13	True	AATAAA	-13	NA	6713178	6757044	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_6714700_6737509_6737634_6738682_6738730_6739731_6739853_6742489_6742598_6746213_6746428_6748463_6748591_6749556_6749658_6750330_6750504_6751038_6751198_6752872_6753038_6754750
WTC11_00073361	chr5	+	3078	14	NIC	ENSG00000124275.15	novel	3245	15	NA	NA	13	0	intron_retention	FALSE	canonical	3	135	junction_1	40.527585754651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865093	True	NA	16	True	AATAAA	-19	NA	7869160	7901113	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
WTC11_00073366	chr5	+	3573	26	NIC	ENSG00000145495.16	novel	9641	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_11	36.7750785179311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTTGTCTCAACAACTT	10351652	True	NA	-5	True	NA	NA	NA	10353702	10433684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10401487_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
WTC11_00073368	chr5	+	2337	1	ISM	ENSG00000145495.16	ENST00000274140.10	9641	26	82003	2354	1769	185	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCTTCTGTCTCCCTA	10435678	False	NA	NA	False	TTTAAA	-24	NA	10435697	10438034	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_10435700_10438000
WTC11_00073370	chr5	+	5521	30	ISM	ENSG00000038382.21	ENST00000512070.6	8907	57	-585	109173	-90	103	5prime_fragment	FALSE	canonical	2	7	junction_6	5.00701054301701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGAGTAAATTTATGG	14141324	True	NA	NA	False	AATAAA	-15	NA	14143251	14399503	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879
WTC11_00073371	chr5	+	11460	57	FSM	ENSG00000038382.21	ENST00000344204.9	11460	57	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_39	5.98038353660515	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTAGGCTTTTTA	14141414	True	NA	6	True	ATTAAA	-14	NA	14143341	14510204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879_14399071_14400962_14401065_14405847_14405991_14406572_14406673_14419777_14420022_14461018_14461312_14462754_14462926_14465544_14465641_14471317_14471467_14472591_14472659_14473993_14474098_14476893_14476964_14479260_14479351_14479918_14480012_14481233_14481285_14481540_14481619_14482581_14482774_14485068_14485247_14487463_14488261_14492566_14492815_14496878_14497018_14497846_14497875_14498088_14498252_14498518_14498641_14502578_14502658_14504392_14504594_14507121_14507261_14507879
WTC11_00073374	chr5	+	1821	1	FSM	ENSG00000241552.3	ENST00000473445.3	294	1	-1240	-287	-1240	287	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGGTATGACATTTACA	18546046	False	NA	NA	False	NA	NA	NA	18546071	18547892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_18546100_18547900
WTC11_00073375	chr5	+	1442	5	FSM	ENSG00000183666.18	ENST00000685932.1	1792	5	81	269	5	1	multi-exon	FALSE	canonical	2	3	junction_3	15.3297097167559	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	21458360	True	NA	NA	False	AATAAA	-22	NA	21459560	21474439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21471461_21471647_21473356
WTC11_00073376	chr5	+	1458	3	FSM	ENSG00000183666.18	ENST00000652767.1	1458	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTATTTTTATTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	21470981	21474438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21471173_21471461_21471647_21473356
WTC11_00073377	chr5	+	877	1	FSM	ENSG00000226432.3	ENST00000514047.1	877	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGGTGAATCTGGTG	NA	False	NA	NA	False	AGTAAA	-23	NA	24170369	24171246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_24170400_24171200
WTC11_00073379	chr5	+	1375	3	FSM	ENSG00000250337.8	ENST00000653835.1	1456	3	6	75	1	-75	multi-exon	FALSE	canonical	1	3	junction_2	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTTCACCAAATTTTTA	27467028	True	NA	NA	False	TATAAA	-25	NA	27472276	27496919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27495948
WTC11_00073380	chr5	+	1001	4	FSM	ENSG00000250337.8	ENST00000686605.1	1016	4	15	0	1	0	multi-exon	FALSE	canonical	2	7	junction_3	48.251655124174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGTGTCATTTTGTAA	27467047	True	NA	11	True	AATAAA	-23	NA	27472295	27496401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27495948
WTC11_00073381	chr5	+	2678	3	NIC	ENSG00000250337.8	novel	801	5	NA	NA	6	-23	intron_retention	FALSE	canonical	3	54	junction_2	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTCTAATGGTACTTA	27467064	True	NA	NA	False	AGTAAA	-11	NA	27472312	27485129	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_27472520_27475534_27477802_27484925
WTC11_00073382	chr5	+	5284	4	NIC	ENSG00000250337.8	novel	1111	5	NA	NA	6	-1	intron_retention	FALSE	canonical	1	3	junction_3	52.4658619167423	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTCATTTTGTAATT	27467064	True	NA	13	True	AATAAA	-25	NA	27472312	27496403	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_27472520_27475534_27475696_27484925_27489387_27495948
WTC11_00073383	chr5	+	10229	2	FSM	ENSG00000250337.8	ENST00000671061.1	1433	2	-8796	0	-8	0	multi-exon	FALSE	canonical	3	26	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27484544	False	NA	14	True	AATAAA	-26	NA	27484562	27496404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27494336_27495948
WTC11_00073386	chr5	+	3247	9	NIC	ENSG00000082213.18	novel	3572	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	89.0286997265489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528390	True	NA	17	True	AATAAA	-18	NA	31532288	31554808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
WTC11_00073387	chr5	+	3026	9	NIC	ENSG00000082213.18	novel	3117	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	120.696675596306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528390	True	NA	17	True	AATAAA	-18	NA	31532288	31554808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538480_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
WTC11_00073388	chr5	+	672	4	FSM	ENSG00000133401.16	ENST00000515115.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	9.42809041582063	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCCTGTCCCCTACCTT	NA	False	NA	NA	False	NA	NA	NA	32098596	32108365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32098635_32100861_32100964_32101104_32101240_32107968
WTC11_00073391	chr5	+	610	5	FSM	ENSG00000113407.14	ENST00000505012.5	608	5	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	639.232889876608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACGGTCCGCCAATAGAAA	33421513	True	NA	NA	False	NA	NA	NA	33440992	33455012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453293_33453413_33454944
WTC11_00073394	chr5	+	1313	11	FSM	ENSG00000205838.14	ENST00000505624.5	1353	11	40	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_8	1.61245154965971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCTCGACCACAAA	34839182	False	NA	NA	False	AATAAA	-18	NA	34839203	34899456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34839260_34840664_34840740_34845486_34845674_34850184_34850309_34862897_34863055_34864436_34864563_34866891_34867070_34868904_34869014_34880180_34880309_34896769_34896876_34899389
WTC11_00073396	chr5	+	2915	2	FSM	ENSG00000079215.15	ENST00000680568.1	2915	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	36683332	False	NA	9	True	AATAAA	-16	NA	36683346	36688327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36683999_36686064
WTC11_00073397	chr5	+	2125	18	NNC	ENSG00000082068.9	novel	2877	18	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	50.3721788429296	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACAGGTTTTGTCCTT	37374822	True	NA	21	True	ATTAAA	-11	NA	37379297	37752666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_37379393_37379488_37379555_37381601_37381686_37392002_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
WTC11_00073398	chr5	+	1087	5	FSM	ENSG00000164318.18	ENST00000514476.1	676	5	87	-498	87	0	multi-exon	FALSE	canonical	1	2	junction_3	1.11803398874989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAATCATAATCATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	38448342	38464549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_38448380_38451314_38451459_38458310_38458395_38462907_38463012_38463831
WTC11_00073399	chr5	+	3420	3	FSM	ENSG00000171522.6	ENST00000302472.4	3431	3	5	6	5	-6	multi-exon	FALSE	canonical	2	4	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATCTGAGTTGCATAT	40679778	True	NA	-3	True	AATAAA	-8	NA	40679919	40693729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_40680479_40680950_40681861_40691778
WTC11_00073401	chr5	+	619	4	FSM	ENSG00000205765.10	ENST00000509976.1	637	4	0	18	0	-18	multi-exon	FALSE	canonical	3	181	junction_3	11.0252236056942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAAATAAATTGGGCTT	41900186	True	NA	NA	False	NA	NA	NA	41904370	41911315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047
WTC11_00073403	chr5	+	532	1	FSM	ENSG00000272144.1	ENST00000607250.1	1047	1	251	264	251	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTGAAGTCTAACACT	NA	False	NA	NA	False	NA	NA	NA	43061645	43062177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43061600_43062200
WTC11_00073404	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.3534727920748	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	43120470	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
WTC11_00073405	chr5	+	2513	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	-113	0	-81	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6965241795316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	43121408	False	NA	NA	False	NA	NA	NA	43121426	43175719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
WTC11_00073406	chr5	+	3223	7	NIC	ENSG00000172262.12	novel	3209	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	49	junction_1	43.1611965646099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	43119712	True	NA	16	True	AATAAA	-17	NA	43121606	43176247	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
WTC11_00073407	chr5	+	2517	1	FSM	ENSG00000272335.1	ENST00000607056.1	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGTGTGTGTGTATG	44826065	False	NA	18	True	AATAAA	-25	NA	44826075	44828592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_44826100_44828600
WTC11_00073408	chr5	+	2698	27	FSM	ENSG00000151883.19	ENST00000505697.6	2747	27	49	0	-25	0	multi-exon	TRUE	canonical	2	2	junction_1	23.2432785983389	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCACCATTTAATTAAC	NA	False	NA	NA	False	NA	NA	NA	50665947	50842068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_50666070_50667084_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
WTC11_00073409	chr5	+	7734	30	FSM	ENSG00000164171.11	ENST00000296585.10	7843	30	-62	171	-50	-171	multi-exon	FALSE	canonical	1	3	junction_9	3.96896401929329	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATGAGAAACAAAAATTAAA	52988641	True	NA	38	True	AATAAA	-39	NA	52989289	53094608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_52989533_53026747_53026869_53042111_53042222_53045000_53045093_53048362_53048478_53048642_53048771_53051410_53051560_53055537_53055689_53055983_53056150_53058024_53058102_53059873_53060013_53060900_53061047_53062785_53062930_53064911_53065116_53065840_53065978_53067117_53067258_53070108_53070261_53071937_53072049_53072612_53072696_53073117_53073260_53074384_53074478_53075060_53075138_53075220_53075305_53078771_53078875_53080510_53080622_53081591_53081697_53083339_53083454_53086951_53087042_53089945_53090063_53090518
WTC11_00073410	chr5	+	2386	3	FSM	ENSG00000247796.3	ENST00000502171.2	2367	3	-19	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATATATTGTACTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	53109822	53115123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53110149_53112239_53113035_53113858
WTC11_00073411	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	540.795915500683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552253	True	NA	25	True	AATAAA	-43	NA	53560674	53683338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
WTC11_00073412	chr5	+	3247	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	-2	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156510	True	NA	NA	False	AAAAAG	-22	NA	55160166	55167071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160397_55164054
WTC11_00073414	chr5	+	3351	6	ISM	ENSG00000062194.16	ENST00000264779.6	1786	11	30607	-502	-740	0	3prime_fragment	FALSE	canonical	1	328	junction_4	252.750944607533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57244711	False	NA	21	True	AATAAA	-17	NA	57244727	57263587	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00073416	chr5	+	744	1	FSM	ENSG00000250461.1	ENST00000439448.2	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAAAATCAGGATT	NA	False	NA	NA	False	AAAAAG	-34	NA	61375111	61375855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_61375100_61375900
WTC11_00073420	chr5	+	4945	8	FSM	ENSG00000164197.12	ENST00000389100.9	4945	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1.8405855323893	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAATATGATACTTGT	64165656	True	NA	NA	False	AATAAA	-20	NA	64165842	64372869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360_64217397_64325185_64325412_64330280_64330407_64369614
WTC11_00073421	chr5	+	514	1	ISM	ENSG00000153015.17	ENST00000607786.2	4124	14	246220	439	49584	-439	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTCTCTGTTGGTTATT	NA	False	NA	10	True	GATAAA	-25	NA	65020037	65020551	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_65020000_65020600
WTC11_00073424	chr5	+	513	1	FSM	ENSG00000251648.2	ENST00000511047.2	682	1	118	51	118	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGGCTCATGGCCAT	NA	False	NA	NA	False	NA	NA	NA	65733090	65733603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65733100_65733600
WTC11_00073425	chr5	+	7516	24	FSM	ENSG00000112851.15	ENST00000380935.5	6692	24	-824	0	-806	0	multi-exon	FALSE	canonical	2	5	junction_21	29.4332733541525	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAGAAGACATTTTTAG	65923578	True	NA	NA	False	AATAAA	-40	NA	65925749	66081023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66076315_66076409_66076874_66076950_66078422
WTC11_00073426	chr5	+	3144	2	FSM	ENSG00000112851.15	ENST00000506744.1	673	2	-509	-1962	-210	0	multi-exon	FALSE	canonical	3	167	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGTGTTCCCTTTATT	NA	False	NA	17	True	AAAAAG	-27	NA	66075899	66080516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66076950_66078422
WTC11_00073428	chr5	+	9353	5	FSM	ENSG00000153914.16	ENST00000519259.5	9353	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	21.3600093632938	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAAATGTTTGTTTAT	66163570	False	NA	1	True	AATAAA	-13	NA	66163582	66180879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
WTC11_00073430	chr5	+	717	5	FSM	ENSG00000069020.19	ENST00000406039.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCCACCACATTAAATAA	66596264	False	NA	NA	False	NA	NA	NA	66596655	66986486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66597019_66759708_66759863_66788669_66788795_66899950_66899983_66986443
WTC11_00073437	chr5	+	3709	9	FSM	ENSG00000197822.12	ENST00000681586.1	3695	9	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	110.138478176339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAGATGGAGTTTTGC	69490186	False	NA	NA	False	NA	NA	NA	69493537	69555275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69494006_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
WTC11_00073438	chr5	+	4441	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	-13	34	intron_retention	FALSE	canonical	3	30	junction_1	176.036384289584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATATTATTTATATTT	69556783	True	NA	NA	False	ATTAAA	-41	NA	69560177	69595255	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
WTC11_00073439	chr5	+	1633	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-30	282	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.926589443708	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTAATTCATTAATT	69556766	True	NA	NA	False	ATTAAA	-17	NA	69560160	69592528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
WTC11_00073440	chr5	+	4455	1	FSM	ENSG00000250138.4	ENST00000515156.2	4437	1	-44	26	-44	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTGGGCATCCTTCAGC	NA	False	NA	NA	False	NA	NA	NA	69631918	69636373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69631900_69636400
WTC11_00073441	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_1	987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70025586	70032493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70025732_70026406_70026516_70032314
WTC11_00073442	chr5	+	4098	11	ISM	ENSG00000269983.1_ENSG00000226259.10	ENST00000513202.5	1954	15	7262	-2338	2457	0	3prime_fragment	FALSE	canonical	3	118	junction_4	142.481612848816	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	70422704	70450353	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
WTC11_00073443	chr5	+	718	1	FSM	ENSG00000269983.1	ENST00000602697.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	70449635	70450353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70449600_70450400
WTC11_00073447	chr5	+	3646	16	FSM	ENSG00000131844.17	ENST00000505435.4	3624	16	-22	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	97.5669798423399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAATATAAAGTTGTAT	NA	False	NA	-22	True	NA	NA	NA	71587333	71657184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71642728_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00073448	chr5	+	3359	15	NIC	ENSG00000131844.17	novel	3685	17	NA	NA	-7	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	86.6268387029878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATATTGTAATTGATGT	NA	False	NA	NA	False	AATGAA	-7	NA	71587348	71658594	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00073450	chr5	+	5555	5	FSM	ENSG00000131844.17	ENST00000682438.1	5535	5	-20	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	18.8994047525312	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTGTGATATTTAG	71643022	False	NA	6	True	AATAAA	-15	NA	71643042	71658704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
WTC11_00073454	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	46.7755368826658	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	72836758	True	NA	-10	True	AATAGA	-31	NA	72848120	72914368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
WTC11_00073456	chr5	+	334	1	FSM	ENSG00000249149.2	ENST00000514718.2	367	1	130	-97	130	18	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTAAGCTGTGTT	NA	False	NA	NA	False	TATAAA	-20	NA	73410193	73410527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73410200_73410500
WTC11_00073462	chr5	+	914	2	FSM	ENSG00000214944.10	ENST00000503341.1	1926	2	1012	0	1012	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGGCATTCACTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	73909411	73911702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73909898_73911274
WTC11_00073464	chr5	+	2020	1	FSM	ENSG00000271714.1	ENST00000606270.1	1962	1	-251	193	-251	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCCAGTGATGAATGAAA	74865630	False	NA	NA	False	AATAGA	-31	NA	74865641	74867661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74865600_74867700
WTC11_00073468	chr5	+	268	1	FSM	ENSG00000272040.1	ENST00000606908.1	1167	1	36	863	36	-863	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATGATGATGCATTT	NA	False	NA	NA	False	NA	NA	NA	75608852	75609120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75608900_75609100
WTC11_00073469	chr5	+	312	1	FSM	ENSG00000251107.1	ENST00000507570.1	312	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACTAAAAGTTTTCAT	NA	False	NA	NA	False	AATAGA	-21	NA	76280955	76281267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_76281000_76281300
WTC11_00073471	chr5	+	3236	16	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	51.129465303504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTGCCTTTTTTTTCTG	79609389	True	NA	10	True	AATAAA	-20	NA	79612452	79686647	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00073472	chr5	+	4874	15	NNC	ENSG00000164329.14	novel	465	5	NA	NA	1475	-59	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	52.2230303406379	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAACTCTGTGACTTGC	79614076	False	NA	-39	True	NA	NA	NA	79614092	79688187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79614561_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00073476	chr5	+	1401	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25707	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.54950975679639	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	79784405	True	NA	NA	False	AATAAA	-18	NA	79784459	79800222	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79784600_79788970_79789105_79790969_79791070_79793436_79793611_79799369
WTC11_00073477	chr5	+	515	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-2	-35803	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	34	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCTGTGTATGTGA	79990720	True	NA	11	True	AATAAA	-25	NA	79991308	80020103	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79991413_79998331_79998376_80019736
WTC11_00073478	chr5	+	729	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-2	-35803	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCTGTGTATGTGA	79990720	True	NA	11	True	AATAAA	-25	NA	79991308	80020103	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79991413_79998331_79998376_80019522
WTC11_00073479	chr5	+	3088	23	NIC	ENSG00000113296.14	novel	853	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	20.8635868488222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	79990724	True	NA	22	True	AATAAA	-24	NA	79991312	80083287	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79991413_79998331_79998376_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
WTC11_00073480	chr5	+	3048	21	NIC	ENSG00000113296.14	novel	3222	22	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_7	20.3996936251504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	80034826	True	NA	22	True	AATAAA	-24	NA	80035383	80083287	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
WTC11_00073481	chr5	+	6728	19	NNC	ENSG00000039319.17	novel	6680	19	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	25.381533094402	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCTATTCAACAAACTT	80406417	True	NA	108	True	AGTAAA	-20	NA	80408107	80479350	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_80408154_80411723_80411774_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
WTC11_00073484	chr5	+	3964	22	FSM	ENSG00000113318.11	ENST00000667069.1	3964	22	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_10	19.6307177496158	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGATCACGTCACTGC	80652514	True	NA	NA	False	NA	NA	NA	80654693	80876573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
WTC11_00073486	chr5	+	1475	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	1	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.2704627669473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTGCTTTGTTTCTCTG	81233115	True	NA	NA	False	AATAAA	-15	NA	81233321	81266397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
WTC11_00073488	chr5	+	4626	5	FSM	ENSG00000131732.12	ENST00000254037.6	4606	5	-20	0	-4	0	multi-exon	FALSE	canonical	3	201	junction_1	13.1980112138155	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	81298081	True	NA	NA	False	AATAAA	-30	NA	81301582	81313297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
WTC11_00073491	chr5	+	3233	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	-47	-1391	-19	50	multi-exon	FALSE	canonical	3	33	junction_2	32.8878301959859	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGATGAGAGTCTATCA	81971984	True	NA	54	True	NA	NA	NA	81972003	82256183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
WTC11_00073492	chr5	+	9969	13	ISM	ENSG00000038427.16	ENST00000343200.9	9455	14	-371	1	-315	0	intron_retention	FALSE	canonical	3	210	junction_6	220.721544032294	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	83471175	False	NA	23	True	AAGAAA	-24	NA	83471302	83582302	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979
WTC11_00073494	chr5	+	349	2	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACATTCCACCACAAAAG	NA	False	NA	NA	False	NA	NA	NA	84700790	84703878	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_84701006_84703744
WTC11_00073496	chr5	+	509	4	FSM	ENSG00000127184.13	ENST00000505430.5	496	4	-13	0	0	0	multi-exon	TRUE	canonical	1	9	junction_2	393.308473790682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572636	True	NA	24	True	AATAAA	-14	NA	86617927	86620766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618054_86619352_86619497_86619738_86619879_86620667
WTC11_00073497	chr5	+	1584	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	11513	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTAATGCCTCTT	86572664	True	NA	19	True	AATAAA	-9	NA	86617955	86620761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618131_86619352
WTC11_00073498	chr5	+	655	4	FSM	ENSG00000247828.9	ENST00000689901.1	620	4	-40	5	2	2	multi-exon	FALSE	canonical	0	0	junction_3	53.2561942145909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATATTTGGTTTCTTGT	88266509	True	NA	15	True	AATAAA	-42	NA	88268892	88436667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88436272
WTC11_00073499	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	2	40	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	88266532	True	NA	33	True	AATAAA	-37	NA	88268915	88436685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88436272
WTC11_00073500	chr5	+	788	7	NIC	ENSG00000247828.9	novel	1316	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	38.2477305063828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGTTTGTGGTAGTT	88266536	True	NA	4	True	AATAAA	-16	NA	88268919	88287650	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88283009_88283087_88285740_88285852_88287435
WTC11_00073504	chr5	+	532	4	FSM	ENSG00000248309.8	ENST00000514571.1	594	4	0	62	0	-62	multi-exon	FALSE	canonical	1	4	junction_3	2.05480466765633	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCATCCTTGTAAACTT	NA	False	NA	NA	False	AATAGA	-12	NA	88965874	89168606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88965916_89094958_89095030_89150532_89150596_89168249
WTC11_00073506	chr5	+	588	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	4	-80	combination_of_known_junctions	FALSE	canonical	3	123	junction_3	219.624426894844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	90460420	True	NA	12	True	AATAAA	-18	NA	90474898	90490778	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
WTC11_00073507	chr5	+	3025	11	FSM	ENSG00000164199.18	ENST00000639676.1	3116	11	0	91	0	-91	multi-exon	FALSE	canonical	2	3	junction_7	2.7367864366808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAATTGAAATACTTTG	90642879	False	NA	NA	False	NA	NA	NA	90642890	90674551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90643042_90643802_90643984_90644705_90644870_90645967_90646092_90647497_90647765_90651603_90651731_90652345_90652564_90653208_90653953_90657904_90658279_90672545_90672723_90674053
WTC11_00073508	chr5	+	10095	47	ISM	ENSG00000164199.18	ENST00000405460.9	19557	90	160945	222	-440	0	3prime_fragment	FALSE	canonical	2	9	junction_1	39.0800400129044	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	90719730	False	NA	13	True	AATAAA	-13	NA	90719741	91164215	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_90720224_90720934_90721060_90724831_90724990_90725085_90725233_90725548_90725657_90728668_90728934_90729641_90729765_90745045_90745266_90745590_90745796_90750550_90750698_90753573_90753830_90754982_90755186_90756453_90756631_90756978_90757162_90759408_90759589_90763304_90763470_90774185_90774304_90776452_90776577_90777904_90778044_90778426_90778610_90778864_90779098_90781429_90781579_90783123_90783326_90783837_90784058_90788070_90788311_90789701_90789852_90790872_90791347_90802738_90802883_90805283_90805459_90807601_90807738_90810232_90811339_90815618_90815737_90823424_90823597_90828943_90829187_90840577_90840986_90848636_90848822_90853283_90853534_90854061_90854202_90855740_90855902_90863756_90863858_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
WTC11_00073509	chr5	+	4505	21	FSM	ENSG00000164199.18	ENST00000640464.1	4505	21	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	6.35924523823386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAAGTAGTCGTTTAG	90720171	True	NA	NA	False	AATAAA	-8	NA	90720181	90780101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90720224_90720934_90721060_90724831_90724990_90725085_90725233_90725548_90725657_90728668_90728934_90729641_90729765_90745045_90745266_90745590_90745796_90750550_90750698_90753573_90753830_90754982_90755186_90756453_90756631_90756978_90757162_90759408_90759589_90763304_90763470_90774185_90774304_90776452_90776577_90777904_90778044_90778426_90778610_90778864
WTC11_00073510	chr5	+	2467	5	FSM	ENSG00000164199.18	ENST00000638975.1	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.34428877022476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATCAGCTACTTTG	90783249	True	NA	NA	False	AAAACA	-14	NA	90783263	90792667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90783326_90783837_90784058_90788070_90788311_90789701_90789852_90790872
WTC11_00073512	chr5	+	531	1	FSM	ENSG00000213730.3	ENST00000511220.1	997	1	617	-151	617	151	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCTCTGACTCAAAAAG	93268033	False	NA	NA	False	NA	NA	NA	93268045	93268576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_93268000_93268600
WTC11_00073513	chr5	+	2722	5	FSM	ENSG00000175449.14	ENST00000311364.8	2722	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.3047080231955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGAACTTTGTGAATGT	95646356	False	NA	8	True	AATAAA	-15	NA	95646853	95657140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95648075_95652136_95652332_95654060_95654237_95654332_95654368_95656045
WTC11_00073515	chr5	+	1405	15	FSM	ENSG00000153113.24	ENST00000511097.6	1399	15	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_11	55.6525757146376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTTTTAGCCACAGTG	96660568	True	NA	NA	False	ATTAAA	-11	NA	96662196	96746425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96741265_96741359_96741493_96741581_96742654_96742757_96746341
WTC11_00073517	chr5	+	2675	28	NIC	ENSG00000153113.24	novel	4282	29	NA	NA	-68	4	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	46.1878730394917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATTCTTCAGTGTTC	96702684	False	NA	-6	True	AAAACA	-6	NA	96702712	96773045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96702916_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00073519	chr5	+	4954	1	ISM	ENSG00000113441.16	ENST00000231368.10	12134	18	96478	2	36180	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTGTGGACTCTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	97032557	97037511	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_97032600_97037500
WTC11_00073520	chr5	+	4931	5	NIC	ENSG00000174136.13	novel	4580	5	NA	NA	291	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_2	50.4058528347651	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	98768930	False	NA	13	True	AATAAA	-22	NA	98768940	98796494	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_98769626_98770597_98770674_98773955_98774207_98779579_98780089_98793084
WTC11_00073521	chr5	+	320	2	FSM	ENSG00000145730.21	ENST00000508060.1	369	2	49	0	49	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCAGGGCACGCGAGCGG	102754705	False	NA	NA	False	NA	NA	NA	102754715	102865912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102754946_102865822
WTC11_00073522	chr5	+	4297	25	NIC	ENSG00000145730.21	novel	3993	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_23	50.0301992134084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGCATTAGCTGTC	102754754	True	NA	-1	True	AATAAA	-4	NA	102754782	103029702	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
WTC11_00073525	chr5	+	3417	23	NIC	ENSG00000145730.21	novel	3649	25	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_21	40.4897956739597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	102865792	False	NA	10	True	AATAAA	-15	NA	102865826	103029713	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
WTC11_00073526	chr5	+	3416	23	ISM	ENSG00000145730.21	ENST00000510208.2	3978	24	111045	-9	5	0	3prime_fragment	FALSE	canonical	3	57	junction_21	42.618720908784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102865810	True	NA	13	True	AATAAA	-18	NA	102865827	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
WTC11_00073527	chr5	+	3938	25	NIC	ENSG00000145730.21	novel	3990	26	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	66.143769652847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102865810	True	NA	13	True	AATAAA	-18	NA	102865827	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025133_103025335_103028184_103028239_103028886
WTC11_00073528	chr5	+	5601	30	NNC	ENSG00000145725.20	novel	15369	31	NA	NA	6	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.0005945270482	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATGGTAAATTTTTAAA	103116781	True	NA	23	True	ATTAAA	-23	NA	103120306	103203214	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
WTC11_00073529	chr5	+	5604	30	NIC	ENSG00000145725.20	novel	15369	31	NA	NA	6	-22	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	50.381257485561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATGGTAAATTTTTAAA	103116781	True	NA	23	True	ATTAAA	-23	NA	103120306	103203214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
WTC11_00073532	chr5	+	3955	5	NIC	ENSG00000145725.20	novel	5842	29	NA	NA	-1064	0	intron_retention	FALSE	canonical	3	43	junction_2	88.4222822596205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTATAGTTATCACT	103183161	False	NA	10	True	AATAAA	-20	NA	103183178	103203523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
WTC11_00073534	chr5	+	359	2	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGTCACAGGGGATGC	NA	False	NA	NA	False	NA	NA	NA	104063675	104070430	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_104063844_104070239
WTC11_00073535	chr5	+	910	4	FSM	ENSG00000251026.2	ENST00000666455.1	927	4	17	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	1167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTTTCTGATAGATT	104079821	True	NA	NA	False	AATAAA	-24	NA	104079918	104082573	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_104080125_104080907_104081042_104081879_104081948_104082071
WTC11_00073537	chr5	+	822	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	106978751	False	NA	24	True	AATAAA	-24	NA	106978791	106984052	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106979187_106983625
WTC11_00073538	chr5	+	718	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	106976373	True	NA	24	True	AATAAA	-24	NA	106978892	106984052	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106979187_106983628
WTC11_00073539	chr5	+	450	2	Antisense	novelGene_ENSG00000184349.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAATACTCACAAGTATT	NA	False	NA	NA	False	NA	NA	NA	107618623	107623058	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_107619003_107622987
WTC11_00073540	chr5	+	359	1	FSM	ENSG00000244245.1	ENST00000466800.1	359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTCAATAAATT	NA	False	NA	-42	True	NA	NA	NA	108593608	108593967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_108593600_108594000
WTC11_00073542	chr5	+	6236	3	FSM	ENSG00000164209.17	ENST00000513706.2	6236	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	15	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTCTCCTACTGATG	NA	False	NA	12	True	AATAAA	-18	NA	110753301	110765161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_110755522_110756701_110756760_110761203
WTC11_00073543	chr5	+	1156	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	31	1224	31	7	multi-exon	FALSE	canonical	2	10	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCATCTCTCAAATCTA	111073099	True	NA	NA	False	AATAAA	-24	NA	111073344	111076800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_111073646_111075945
WTC11_00073544	chr5	+	1386	1	FSM	ENSG00000278921.2	ENST00000624967.2	1031	1	-377	22	-377	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACACGAGGGGAGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112419205	112420591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112419200_112420600
WTC11_00073546	chr5	+	1593	1	FSM	ENSG00000212643.3	ENST00000512790.6	1470	1	12	-135	12	135	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGCCAACATGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	112891621	112893214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112891600_112893200
WTC11_00073549	chr5	+	509	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	185	250	185	-250	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAGGATGGTATATCT	115262653	True	NA	NA	False	NA	NA	NA	115262689	115263198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_115262700_115263200
WTC11_00073550	chr5	+	870	7	FSM	ENSG00000145781.9	ENST00000515539.5	869	7	-1	0	-1	0	multi-exon	FALSE	canonical	1	5	junction_1	377.436712870148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAGGTTCTAATATAC	116085454	False	NA	NA	False	AATAGA	-15	NA	116085472	116292657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116085607_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
WTC11_00073551	chr5	+	661	4	NNC	ENSG00000145781.9	novel	842	6	NA	NA	10779	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.942809041582063	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCACTGCAGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	116303235	116412684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_116303684_116317516_116317598_116318210_116318301_116412642
WTC11_00073552	chr5	+	479	2	FSM	ENSG00000248445.5	ENST00000512128.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATTTATCTCCATCAG	NA	False	NA	NA	False	NA	NA	NA	116447546	116449861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116447792_116449627
WTC11_00073553	chr5	+	369	1	FSM	ENSG00000239528.1	ENST00000478778.1	369	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGGTGGATAGAGGAC	NA	False	NA	NA	False	NA	NA	NA	116562561	116562930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116562600_116562900
WTC11_00073554	chr5	+	355	3	FSM	ENSG00000249167.2	ENST00000660260.1	2286	3	-27	1958	-26	-1956	multi-exon	FALSE	canonical	1	3	junction_2	5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTAATTTATAAAAAGA	116574445	False	NA	NA	False	AGTAAA	-38	NA	116574455	116609242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116574540_116590974_116591103_116609099
WTC11_00073555	chr5	+	2184	4	FSM	ENSG00000249167.2	ENST00000663913.1	2183	4	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.55777733351102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTTACATCCCAATAAA	116574471	False	NA	NA	False	ATTAAA	-36	NA	116574481	116611198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116574540_116590974_116591103_116609099_116609197_116609297
WTC11_00073556	chr5	+	1542	2	FSM	ENSG00000249167.2	ENST00000655160.1	1677	2	0	135	0	68	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATTAACTTTATTTATT	116574888	False	NA	NA	False	AATAAA	-25	NA	116575193	116591526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116576181_116590971
WTC11_00073557	chr5	+	419	1	FSM	ENSG00000197575.6	ENST00000461663.1	408	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTCTGCAATGCTGTA	NA	False	NA	NA	False	TATAAA	-22	NA	116716231	116716650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116716200_116716600
WTC11_00073560	chr5	+	8564	40	NIC	ENSG00000172869.15	novel	11072	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	22.1218013730682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCAAGAATTTCTACC	119071165	False	NA	NA	False	NA	NA	NA	119071204	119237414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321
WTC11_00073563	chr5	+	2505	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	-11	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	234.084735134824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	119436079	True	NA	-4	True	AATAAA	-1	NA	119452464	119542316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
WTC11_00073564	chr5	+	2574	23	FSM	ENSG00000133835.18	ENST00000682996.1	2563	23	-11	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	244.218216335479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATACCTTTGTTTTT	119436079	True	NA	-2	True	AATAAA	-3	NA	119452464	119542318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00073565	chr5	+	4532	24	FSM	ENSG00000133835.18	ENST00000683936.1	4532	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	312.64883941315	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	119436079	True	NA	126	True	TTTAAA	-5	NA	119452464	119542446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00073566	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	242.993623016009	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	119436111	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00073567	chr5	+	2792	24	FSM	ENSG00000133835.18	ENST00000646058.1	2780	24	-12	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	235.53466507057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTTACTTCTGA	119436111	True	NA	NA	False	AATAAA	-3	NA	119452496	119585006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119584414
WTC11_00073568	chr5	+	4457	24	FSM	ENSG00000133835.18	ENST00000683265.1	4449	24	-8	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	352.004774198591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	119452692	False	NA	126	True	TTTAAA	-5	NA	119452727	119542446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00073570	chr5	+	5475	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTCAGCGAAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	120697579	120703054	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_120697600_120703100
WTC11_00073571	chr5	+	1311	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	6451	391	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGCTTATTTGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	120787668	120791169	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_120787764_120789953
WTC11_00073573	chr5	+	2422	9	FSM	ENSG00000064692.20	ENST00000508017.5	2410	9	-12	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	17.900768139943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAGTATTTTGATTGCT	122312110	True	NA	70	True	NA	NA	NA	122312236	122464116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
WTC11_00073574	chr5	+	3567	11	FSM	ENSG00000064692.20	ENST00000261368.13	3577	11	0	10	0	-10	multi-exon	FALSE	canonical	3	21	junction_1	12.9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTAAGTACTAAAGGATC	122312110	True	NA	NA	False	AATAAA	-13	NA	122312236	122464209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
WTC11_00073576	chr5	+	4641	13	FSM	ENSG00000151292.17	ENST00000345990.8	4635	13	-6	0	-6	0	multi-exon	TRUE	canonical	2	26	junction_12	65.455402544192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAGGGAAATAGCA	123508382	True	NA	NA	False	ATTAAA	-12	NA	123512092	123617040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
WTC11_00073577	chr5	+	4649	13	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_12	69.377990426039	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGGAAATAGCATCATT	123508382	True	NA	NA	False	ATTAAA	-17	NA	123512092	123617045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
WTC11_00073580	chr5	+	280	1	FSM	ENSG00000235275.3	ENST00000510337.1	1294	1	268	746	268	-746	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTCCGCAATGTCATTG	NA	False	NA	NA	False	NA	NA	NA	123636377	123636657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123636400_123636700
WTC11_00073581	chr5	+	2977	15	FSM	ENSG00000155324.10	ENST00000542322.5	2977	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	27.0004724070539	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTTGTCAGTTCG	126423156	False	NA	38	True	AATAAA	-28	NA	126423176	126494161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
WTC11_00073584	chr5	+	6265	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCATCTGGGCTTATAC	126839359	False	NA	NA	False	NA	NA	NA	126839369	126845634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126839400_126845600
WTC11_00073585	chr5	+	5924	2	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCATCTGGGCTTATAC	126839359	False	NA	NA	False	NA	NA	NA	126839369	126845634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126844153_126844493
WTC11_00073587	chr5	+	263	1	FSM	ENSG00000271766.1	ENST00000607594.1	443	1	170	10	170	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAACCCAAAAGGTTCG	NA	False	NA	NA	False	AATAAA	-4	NA	127478464	127478727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_127478500_127478700
WTC11_00073589	chr5	+	684	4	FSM	ENSG00000145808.10	ENST00000505791.5	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	30.7354301526214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGTCTTGAGTTTT	129459416	True	NA	NA	False	GATAAA	-26	NA	129460280	129527831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_129460483_129509076_129509243_129526283_129526516_129527747
WTC11_00073590	chr5	+	256	1	FSM	ENSG00000248610.1	ENST00000511877.1	1920	1	1683	-19	1683	19	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATTGTTCCACAAAGTT	NA	False	NA	NA	False	NA	NA	NA	130141713	130141969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_130141700_130142000
WTC11_00073592	chr5	+	3521	1	ISM	ENSG00000186687.16	ENST00000379380.9	6219	5	30964	0	-732	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	NA	False	NA	15	True	AATAAA	-25	NA	131201907	131205428	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_131201900_131205400
WTC11_00073596	chr5	+	3870	6	FSM	ENSG00000113522.14	ENST00000651249.1	3870	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	65.7613868466899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACCCTGTCTAAAAA	132618053	False	NA	NA	False	NA	NA	NA	132618069	132646069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177_132642395_132643004
WTC11_00073597	chr5	+	880	2	FSM	ENSG00000164405.11	ENST00000498309.1	874	2	-6	0	-3	0	multi-exon	FALSE	canonical	3	4175	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTGATATTACATTTT	132851247	True	NA	12	True	AATAAA	-17	NA	132866626	132867687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132866688_132866868
WTC11_00073599	chr5	+	935	2	FSM	ENSG00000164406.8	ENST00000483190.1	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCAGTCTGGAATTCA	132873419	False	NA	NA	False	ATTAAA	-16	NA	132873443	132874698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132874090_132874409
WTC11_00073601	chr5	+	570	1	FSM	ENSG00000248648.1	ENST00000505029.1	247	1	-273	-50	-273	50	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGCACAATTTTCCACT	NA	False	NA	NA	False	TATAAA	-31	NA	133002845	133003415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_133002800_133003400
WTC11_00073604	chr5	+	2388	6	NNC	ENSG00000113621.15	novel	3090	5	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_5	47.6193238087229	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	134874225	False	NA	24	True	TATAAA	-18	NA	134874260	134901511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900385_134901072
WTC11_00073605	chr5	+	2948	1	ISM	ENSG00000132570.15	ENST00000512783.5	5621	5	61589	4	57879	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGACACTTTGTTTT	134966698	False	NA	NA	False	AATAAA	-16	NA	134966708	134969656	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_134966700_134969700
WTC11_00073606	chr5	+	7033	9	NIC	ENSG00000113658.18	novel	7013	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	81.4735386490608	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	136129954	True	NA	11	True	AATAAA	-13	NA	136132908	136182733	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_136132963_136147831_136147907_136152674_136152759_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
WTC11_00073607	chr5	+	2253	4	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1338	4	NA	NA	-5	-3	multi-exon	FALSE	canonical	3	6	junction_3	11.4309521329882	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTGACATATTGAT	136465932	True	NA	6	True	AATAAA	-16	NA	136466690	136756155	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753977_136754359
WTC11_00073608	chr5	+	923	5	FSM	ENSG00000120709.11	ENST00000513056.5	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.1665880502445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGCTGGAAATCTTCTC	138333204	True	NA	NA	False	NA	NA	NA	138338265	138347080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138345395_138345610_138346701
WTC11_00073617	chr5	+	6237	22	NIC	ENSG00000254996.5	novel	8246	36	NA	NA	-32546	5	combination_of_known_junctions	FALSE	canonical	3	39	junction_19	35.5727353619846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGCTCCAGTGTT	NA	False	NA	9	True	AGTAAA	-11	NA	140496279	140549574	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
WTC11_00073622	chr5	+	1847	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	-13	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	30.1736023867177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	140637002	True	NA	23	True	AATAAA	-23	NA	140639490	140645408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
WTC11_00073626	chr5	+	4594	1	FSM	ENSG00000255408.4	ENST00000532566.3	4594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGGTTTATTTATT	140800931	True	NA	NA	False	ATTAAA	-19	NA	140801027	140805621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140801000_140805600
WTC11_00073629	chr5	+	12358	1	FSM	ENSG00000250120.8	ENST00000562220.2	12358	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTCCTTTGTGGAT	140854984	True	NA	NA	False	AATAAA	-17	NA	140855882	140868240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140855900_140868200
WTC11_00073630	chr5	+	5583	4	FSM	ENSG00000250120.8	ENST00000307360.6	5409	4	-177	3	-163	-3	multi-exon	FALSE	canonical	2	14	junction_1	78.8768378901915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	140855653	False	NA	NA	False	AATAAA	-17	NA	140855719	141012344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140858437_140978948_140979008_140982474_140982564_141009626
WTC11_00073631	chr5	+	9211	5	NNC	ENSG00000251664.5	novel	5438	5	NA	NA	-7561	-3	intron_retention	FALSE	canonical	2	3	junction_1	81.6987607005149	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	140867740	141012344	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_140871495_140875248_140877840_140978948_140979008_140982474_140982564_141009626
WTC11_00073635	chr5	+	2728	1	FSM	ENSG00000113211.6	ENST00000231136.4	3231	1	270	233	225	140	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTAACACTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	141150326	141153054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141150300_141153100
WTC11_00073643	chr5	+	4761	4	FSM	ENSG00000253953.3	ENST00000519479.2	4761	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	119.30074042799	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141387112	True	NA	24	True	AATAAA	-17	NA	141387697	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141390282_141494806_141494866_141505392_141505482_141510946
WTC11_00073644	chr5	+	4778	4	FSM	ENSG00000276547.2	ENST00000617380.2	4755	4	-23	0	-23	0	multi-exon	FALSE	canonical	3	13	junction_1	117.457320854097	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141397505	True	NA	24	True	AATAAA	-17	NA	141397923	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141400525_141494806_141494866_141505392_141505482_141510946
WTC11_00073646	chr5	+	3903	1	FSM	ENSG00000253873.6	ENST00000622044.1	3633	1	-289	19	-289	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGATTTAGCTAGTAT	141420288	False	NA	NA	False	TATAAA	-27	NA	141420757	141424660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141420800_141424700
WTC11_00073649	chr5	+	4797	4	FSM	ENSG00000240764.4	ENST00000252087.3	4797	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	122.52981496581	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141488645	False	NA	24	True	AATAAA	-17	NA	141489080	141512975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141491701_141494806_141494866_141505392_141505482_141510946
WTC11_00073651	chr5	+	2117	8	NNC	ENSG00000164620.9	novel	2536	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	81.0391691639019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635576	True	NA	12	True	AATAAA	-17	NA	141637003	141641064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141637758_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
WTC11_00073656	chr5	+	2802	6	FSM	ENSG00000236714.3	ENST00000655828.1	2855	6	53	0	37	0	multi-exon	FALSE	canonical	2	3	junction_1	14.430523206038	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCTATAAATTTT	NA	False	NA	11	True	CATAAA	-19	NA	142716281	142760998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142716335_142718115_142718267_142745207_142745719_142756733_142756831_142757826_142757904_142759085
WTC11_00073668	chr5	+	4234	39	NNC	ENSG00000133710.16	novel	3656	34	NA	NA	-78916	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	13.2839227594155	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTTCTGGGATTTCTT	147946301	False	NA	11	True	AATAAA	-17	NA	147946766	148137283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147946879_147948791_147948906_147963709_147963823_148011606_148011725_148020749_148020850_148063944_148064100_148065346_148065373_148070322_148070451_148072147_148072221_148086404_148086533_148088541_148088606_148089493_148089622_148091164_148091229_148094353_148094482_148095817_148095906_148097866_148097995_148099233_148099316_148100453_148100582_148101354_148101437_148101780_148101909_148104951_148105001_148107036_148107165_148108752_148108838_148111767_148111896_148112867_148112935_148114361_148114490_148116369_148116467_148118436_148118565_148118985_148119059_148120008_148120137_148120294_148120392_148123832_148123961_148124764_148124838_148125523_148125614_148125722_148125851_148126982_148127080_148131258_148131390_148133796_148133888_148136982
WTC11_00073676	chr5	+	3721	2	FSM	ENSG00000164591.14	ENST00000456566.2	3290	2	232	-663	232	658	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGCCTGTTTTTGT	150672739	False	NA	NA	False	AATAAA	-39	NA	150672883	150680026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150673285_150676706
WTC11_00073677	chr5	+	11965	11	FSM	ENSG00000145907.16	ENST00000677757.1	11945	11	-20	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	897.465659510156	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732613	True	NA	NA	False	AATAAA	-28	NA	151771909	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151797429_151799211_151799314_151799888_151800044_151800217_151800347_151800759_151800870_151803884
WTC11_00073683	chr5	+	10540	12	FSM	ENSG00000145907.16	ENST00000677323.1	10540	12	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_1	824.82032102966	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151772228	True	NA	NA	False	AATAAA	-28	NA	151772272	151812785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772669_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
WTC11_00073684	chr5	+	482	2	FSM	ENSG00000155511.18	ENST00000474198.1	734	2	61	191	35	78	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAAAATGACTTCAGTT	153490591	False	NA	NA	False	AATGAA	-28	NA	153490704	153494143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_153490971_153493927
WTC11_00073685	chr5	+	5479	3	NNC	ENSG00000037749.13	novel	5157	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	48.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	154035114	True	NA	28	True	ATTAAA	-31	NA	154039011	154057450	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_154039499_154049556_154050018_154052919
WTC11_00073689	chr5	+	463	2	NNC	ENSG00000155506.19	novel	6652	19	NA	NA	27	-45968	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATTGGTGAGATGA	154712481	True	NA	NA	False	ATTAAA	-17	NA	154712869	154740716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_154713131_154740514
WTC11_00073690	chr5	+	7195	19	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	124.353798832004	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154755208	False	NA	33	True	AATAAA	-18	NA	154755284	154817605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793923_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
WTC11_00073691	chr5	+	7793	11	FSM	ENSG00000155506.19	ENST00000685355.1	7518	11	-189	-86	-189	0	multi-exon	FALSE	canonical	3	357	junction_7	97.2111619105543	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154797120	False	NA	33	True	AATAAA	-18	NA	154797220	154817605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
WTC11_00073693	chr5	+	2270	6	NIC	ENSG00000155508.14	novel	2604	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	187.819487806777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154855799	False	NA	14	True	AATAAA	-23	NA	154858688	154876792	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154858817_154863206_154863396_154865191_154865386_154871729_154871875_154872540_154872652_154875289
WTC11_00073695	chr5	+	3673	28	FSM	ENSG00000055163.20	ENST00000435847.6	3673	28	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	74.6710940780254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	157262345	True	NA	NA	False	CATAAA	-19	NA	157266122	157393223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
WTC11_00073696	chr5	+	6375	30	FSM	ENSG00000055163.20	ENST00000521420.5	6370	30	-5	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	71.4488416966011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGGTCTTGATTCCTG	157262345	True	NA	17	True	ATTAAA	-26	NA	157266122	157395595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
WTC11_00073701	chr5	+	1982	4	FSM	ENSG00000113312.12	ENST00000682255.1	1982	4	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	41.7851648315524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	160041977	False	NA	16	True	AATAAA	-10	NA	160041997	160065537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160043170_160049513_160049663_160051128_160051184_160064931
WTC11_00073703	chr5	+	413	3	FSM	ENSG00000170231.16	ENST00000521362.1	440	3	27	0	27	0	multi-exon	FALSE	canonical	3	52	junction_1	13	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	NA	False	NA	8	True	AATAAA	-16	NA	160232061	160238716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160232274_160234819_160234910_160238605
WTC11_00073714	chr5	+	442	2	NNC	ENSG00000234511.10	novel	2113	3	NA	NA	10433	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCATGTTCTTGAAGG	170245328	True	NA	NA	False	AATAAA	-15	NA	170245364	170246228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_170245540_170245961
WTC11_00073717	chr5	+	3340	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	-36	0	-36	0	multi-exon	FALSE	canonical	2	7	junction_8	10.2354986248236	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	170783104	True	NA	11	True	AATAAA	-26	NA	170783688	170814047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
WTC11_00073721	chr5	+	1088	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	-16	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	9308.3274391421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	170933660	True	NA	37	True	AATAAA	-26	NA	171387826	171406736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
WTC11_00073723	chr5	+	1359	10	FSM	ENSG00000181163.14	ENST00000677907.1	1335	10	-24	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	8667.81241286931	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATATTCTCTCTGGAG	171388515	False	NA	127	True	NA	NA	NA	171388611	171410998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
WTC11_00073724	chr5	+	2258	11	FSM	ENSG00000181163.14	ENST00000677325.1	2258	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	6517.66865988138	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTCCTTTTTGTTTAA	171388515	False	NA	-62	True	NA	NA	NA	171388611	171411810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
WTC11_00073728	chr5	+	613	3	FSM	ENSG00000113732.9	ENST00000517669.1	502	3	-61	-50	-1	50	multi-exon	FALSE	canonical	3	1297	junction_2	50.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAGCTTGCATGCACTC	172973728	True	NA	NA	False	AATAAA	-18	NA	172983769	173020607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172983965_172994774_172994823_173020237
WTC11_00073745	chr5	+	1922	10	NNC	ENSG00000169220.18	novel	1536	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	75.8240328037047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366029	True	NA	18	True	NA	NA	NA	177367326	177372596	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_177367558_177367713_177367919_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
WTC11_00073750	chr5	+	1806	4	FSM	ENSG00000131188.12	ENST00000323249.8	1461	4	-29	-316	-29	316	multi-exon	FALSE	canonical	1	1	junction_2	19.8158185969358	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCGAAGGGATCTGGAT	177446430	True	NA	NA	False	NA	NA	NA	177446784	177456602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177446961_177453955_177454041_177454828_177455495_177455723
WTC11_00073755	chr5	+	1702	9	ISM	ENSG00000145916.19	ENST00000313386.9	3911	11	7094	2028	0	0	3prime_fragment	FALSE	canonical	3	441	junction_5	14.9410299176462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTATTTACTGCCC	178133392	False	NA	3	True	NA	NA	NA	178138107	178148540	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00073760	chr5	+	4829	15	FSM	ENSG00000127022.16	ENST00000681894.1	4829	15	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_12	870.820619312846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCCCACTTTCTCCATT	179614253	True	NA	NA	False	AAAAAG	-29	NA	179698922	179731517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724662_179724784_179726679_179726760_179728590
WTC11_00073761	chr5	+	4934	15	FSM	ENSG00000127022.16	ENST00000681504.1	4934	15	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_11	877.412769662801	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGAGCCCTAGTAAAA	179614253	True	NA	-10	True	AATAAA	-2	NA	179698922	179731620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723663_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00073762	chr5	+	4992	16	FSM	ENSG00000127022.16	ENST00000681733.1	4992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1149.63580706626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614339	True	NA	-8	True	AATAAA	-4	NA	179699008	179731622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179702492_179702631_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
WTC11_00073765	chr5	+	1475	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	-1014	4	-16	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCAGTTTCAGGTATT	180291603	True	NA	NA	False	AATAAA	-17	NA	180292161	180295252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_180293419_180295034
WTC11_00073766	chr5	+	430	2	NNC	ENSG00000248367.2	novel	342	2	NA	NA	69	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCAGTTTCAGGTATT	180291695	True	NA	NA	False	AATAAA	-17	NA	180292253	180295252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_180292466_180295034
WTC11_00073767	chr5	+	2147	10	NIC	ENSG00000113300.13	novel	6219	12	NA	NA	-10	1933	intron_retention	FALSE	canonical	3	77	junction_5	47.6058923627561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGCCCTTGTAATA	180485881	True	NA	NA	False	AATACA	-44	NA	180494422	180569901	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564579_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109
WTC11_00073768	chr5	+	6355	13	NNC	ENSG00000113300.13	novel	6250	13	NA	NA	-41	0	intron_retention	TRUE	canonical	3	23	junction_1	72.7741464318812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCAAACATTGTGTTGG	NA	False	NA	-36	True	AATAAA	-14	NA	180494337	180578349	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_180494764_180495651_180495756_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
WTC11_00073775	chr5	+	2724	5	ISM	ENSG00000146063.20	ENST00000503114.1	1904	7	119	1	11	0	intron_retention	TRUE	canonical	2	5	junction_3	9.12071817347735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	181224139	False	NA	7	True	AATAAA	-17	NA	181224176	181235806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233635_181233764_181234173
WTC11_00073777	chr5	+	862	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	-1	3	0	-3	multi-exon	FALSE	canonical	2	13	junction_2	59	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGCGTGTGATGGTGT	181260391	True	NA	NA	False	AATAAA	-23	NA	181261211	181264578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181261385_181263627_181263790_181264051
WTC11_00073782	chr5	-	412	2	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACGGGAGGCGGAGCT	-262135	False	NA	NA	False	NA	NA	NA	262160	261523	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_261672_261896
WTC11_00073784	chr5	-	5979	4	FSM	ENSG00000171368.12	ENST00000360578.7	5979	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.44948974278318	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTGTTCCTCAGAGCA	-693165	True	NA	0	True	AATAAA	-17	NA	693352	659861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_665297_665969_666124_677749_678065_693277
WTC11_00073787	chr5	-	360	2	FSM	ENSG00000188818.13	ENST00000512190.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCACAGCCGCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	843693	842408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_842675_843599
WTC11_00073789	chr5	-	5320	24	NNC	ENSG00000113504.21	novel	5300	24	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_13	21.4147979859449	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTGAAGAATCTCTTGA	NA	False	NA	-10	True	AATAAA	-18	NA	1112052	1050382	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078038_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
WTC11_00073790	chr5	-	3970	13	NIC	ENSG00000164362.21	novel	4039	16	NA	NA	-9	0	intron_retention	FALSE	canonical	3	37	junction_8	21.7004544243254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-1293659	True	NA	-17	True	AGTAAA	-37	NA	1295077	1253166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1293312
WTC11_00073791	chr5	-	2479	17	NNC	ENSG00000049656.14	novel	2492	17	NA	NA	18	8	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_14	259.37951803294	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGAGTCATGAGTGTT	NA	False	NA	-7	True	ATTAAA	-28	NA	1345081	1317743	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339003_1341670_1341861_1344350_1344452_1344679
WTC11_00073792	chr5	-	3575	15	FSM	ENSG00000142319.18	ENST00000270349.12	3942	15	10	357	10	-357	multi-exon	FALSE	canonical	0	0	junction_10	1.60356745147455	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGCTCGGTGGGAGCC	-1445359	True	NA	NA	False	NA	NA	NA	1445430	1393150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1394759_1400914_1400987_1402921_1403090_1406187_1406289_1409025_1409126_1409720_1409850_1411242_1411356_1414690_1414816_1416097_1416202_1420568_1420704_1421875_1422015_1432463_1432699_1441358_1441491_1442911_1443243_1445347
WTC11_00073796	chr5	-	4283	5	NNC	ENSG00000185986.13	novel	1332	8	NA	NA	2	-2705	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	51.4247022354043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTGTGTCTTTA	-1591243	True	NA	0	True	NA	NA	NA	1594474	1577933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1581696_1584983_1585134_1589246_1589366_1593112_1593285_1594394
WTC11_00073797	chr5	-	1275	3	FSM	ENSG00000188002.11	ENST00000689007.1	1381	3	101	5	38	0	multi-exon	FALSE	canonical	3	40	junction_1	44	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	-1632166	True	NA	-5	True	TTTAAA	-41	NA	1633905	1628515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1632844_1632907_1633807
WTC11_00073799	chr5	-	1533	4	NNC	ENSG00000250579.3	novel	1628	4	NA	NA	-548	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	48.7259912389909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5140686	False	34	-39	True	AATAAA	-4	NA	5140701	5132100	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_5133233_5133636_5133771_5133867_5134071_5140637
WTC11_00073800	chr5	-	6960	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAACATGTACCACAACT	-7269284	False	NA	NA	False	NA	NA	NA	7269298	7262338	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_7262300_7269300
WTC11_00073801	chr5	-	2263	2	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAACATGTACCACAACT	-7269284	False	NA	NA	False	NA	NA	NA	7269298	7262338	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_7264175_7268871
WTC11_00073802	chr5	-	1708	2	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	223	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAACATGTACCACAACT	-7269336	False	NA	NA	False	NA	NA	NA	7269350	7262338	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_7263765_7269068
WTC11_00073803	chr5	-	338	1	FSM	ENSG00000272049.1	ENST00000607691.1	587	1	-57	306	-57	-306	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTCACTGAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	8445592	8445254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_8445300_8445600
WTC11_00073804	chr5	-	11757	23	FSM	ENSG00000112902.12	ENST00000382496.10	11755	23	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_18	3.77792631912366	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTGGCATTTTTCTTT	-9545477	True	NA	NA	False	AATAAA	-20	NA	9546075	9035030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_9043017_9044372_9044585_9050409_9050458_9051872_9052029_9054086_9054258_9062886_9063106_9066420_9066647_9108139_9108288_9118997_9119142_9122655_9122838_9136503_9136622_9154487_9154696_9190266_9190472_9197167_9197304_9201954_9202241_9224673_9224888_9226868_9226968_9237827_9237891_9318371_9318418_9337712_9337813_9379822_9380024_9437755_9437853_9545583
WTC11_00073808	chr5	-	1036	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	-11	-124	-11	124	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATATTTGTTTTTTTGTT	-10353201	True	NA	NA	False	NA	NA	NA	10353612	10352576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10352600_10353600
WTC11_00073809	chr5	-	365	1	FSM	ENSG00000251548.1	ENST00000504159.1	619	1	98	156	98	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGCAGAATGATGATGAGC	NA	False	NA	NA	False	NA	NA	NA	10665015	10664650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10664600_10665000
WTC11_00073810	chr5	-	4529	3	FSM	ENSG00000112977.16	ENST00000508253.5	785	3	124	-3868	0	2	multi-exon	FALSE	canonical	3	420	junction_2	33	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTTCTTATAGATC	-10761057	False	NA	2	True	AATAAA	-22	NA	10761101	10679227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10683572_10748174_10748272_10761013
WTC11_00073811	chr5	-	5485	3	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	88	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAAAATATCTGTTTA	-12650334	True	NA	NA	False	NA	NA	NA	12668001	12655690	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12665722_12665825_12667735
WTC11_00073813	chr5	-	372	1	FSM	ENSG00000251112.2	ENST00000513713.2	632	1	-85	345	-85	-345	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATCCTGAGGTCCCA	NA	False	NA	NA	False	GGGGCT	-38	NA	12794816	12794444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_12794400_12794800
WTC11_00073814	chr5	-	1757	4	FSM	ENSG00000183654.9	ENST00000332432.9	1757	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.942809041582063	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTGTGTGTAATTTTTC	NA	False	NA	NA	False	AATATA	-17	NA	16179791	16067138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16067794_16090888_16091082_16177725_16177882_16179038
WTC11_00073815	chr5	-	7257	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.194010415709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16733523	True	NA	NA	False	AATAAA	-17	NA	16738292	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663367_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
WTC11_00073816	chr5	-	9472	42	NNC	ENSG00000145555.15	novel	11442	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.789534914273	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16934055	True	NA	NA	False	AATAAA	-17	NA	16936259	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663361_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
WTC11_00073817	chr5	-	9510	42	NNC	ENSG00000145555.15	novel	11442	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.789534914273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-16934084	True	NA	NA	False	AATAAA	-17	NA	16936288	16661906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663368_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
WTC11_00073819	chr5	-	300	1	FSM	ENSG00000243538.1	ENST00000470806.1	348	1	-8	56	-8	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTGATTTAGAACTGCG	NA	False	NA	NA	False	NA	NA	NA	16902649	16902349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16902300_16902600
WTC11_00073820	chr5	-	356	1	FSM	ENSG00000271892.1	ENST00000606282.1	430	1	70	4	70	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGTCCTTCGAATG	NA	False	NA	NA	False	AATAAA	-13	NA	17107719	17107363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_17107400_17107700
WTC11_00073821	chr5	-	1635	4	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	85.9470120998333	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAAGTGAGCACTCAC	-18673131	False	NA	-34	True	NA	NA	NA	18673204	18653815	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18654064_18658426_18658540_18664323_18664435_18672041
WTC11_00073822	chr5	-	813	5	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_4	83.1636188486288	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAAGTGAGCACTCAC	-18674170	True	NA	-34	True	NA	NA	NA	18674243	18653815	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18654064_18658426_18658540_18664323_18664435_18672041_18672144_18674004
WTC11_00073823	chr5	-	12235	3	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_2	86.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-18674169	True	NA	NA	False	AATAGA	-41	NA	18674242	18646653	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18674004
WTC11_00073824	chr5	-	5128	4	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_3	87.8268498555855	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACACA	-18674169	True	NA	-81	True	NA	NA	NA	18674242	18653862	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18672041_18672144_18674004
WTC11_00073826	chr5	-	2148	1	FSM	ENSG00000233974.3	ENST00000502532.1	2685	1	-23	560	-23	-560	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTCACACCCGCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	21484034	21481886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_21481900_21484000
WTC11_00073827	chr5	-	14440	3	NNC	ENSG00000248605.5	novel	369	3	NA	NA	-86	-527	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	70.5	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATATATCTTAGCATC	-25445396	True	NA	NA	False	AAAACA	-20	NA	25446011	25413965	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25415670_25422729_25435274_25445819
WTC11_00073828	chr5	-	9995	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-5848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTACTGAATACTGTAA	-25445310	True	NA	NA	False	AAAAAG	-2	NA	25445925	25421493	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25421521_25425411_25435274_25445819
WTC11_00073829	chr5	-	8887	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	1	-9766	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCTTTCTTTGTCTAT	-25445291	True	NA	-7	True	AATAAA	-23	NA	25445906	25425411	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25434212_25445819
WTC11_00073830	chr5	-	8918	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	2	-9766	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	30.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCTTTCTTTGTCTAT	-25445290	True	NA	-7	True	AATAAA	-23	NA	25445905	25425411	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25434212_25435241_25435274_25445819
WTC11_00073831	chr5	-	4546	34	NIC	ENSG00000113360.17	novel	5305	35	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	42	junction_30	85.8156779295741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	-31522514	True	NA	NA	False	AATAAA	-15	NA	31532050	31401151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31526078_31526913_31529039_31529106_31530797_31530925_31531989
WTC11_00073832	chr5	-	4712	36	NNC	ENSG00000113360.17	novel	5416	36	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_35	83.2845331942718	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	-31522515	True	NA	NA	False	AATAAA	-15	NA	31532051	31401151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531522_31531989
WTC11_00073833	chr5	-	5356	36	NNC	ENSG00000113360.17	novel	5416	36	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	120	junction_18	74.2424929208472	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTGTTTCATTCATCA	-31522525	True	NA	NA	False	AATAAA	-21	NA	31532061	31400497	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
WTC11_00073838	chr5	-	735	1	FSM	ENSG00000224282.3	ENST00000463864.1	576	1	23	-182	23	182	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCACTTGAGCACAAGAC	NA	False	NA	NA	False	GGGGCT	-10	NA	31823113	31822378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31822400_31823100
WTC11_00073839	chr5	-	5192	17	NIC	ENSG00000150712.11	novel	5116	16	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	74.2309529441728	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	-32307919	True	NA	-6	True	ATTAAA	-18	NA	32312955	32227006	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_32230348_32232960_32233021_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
WTC11_00073840	chr5	-	4961	14	NIC	ENSG00000150712.11	novel	5116	16	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_13	71.2861555726732	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	-32307977	True	NA	-6	True	ATTAAA	-18	NA	32313013	32227006	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_32230348_32233772_32233935_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32312757
WTC11_00073841	chr5	-	5597	7	NNC	ENSG00000151388.11	novel	8572	24	NA	NA	45572	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	2.98142396999972	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTTTCTGTGTGATTC	NA	False	NA	-2	True	AATAAA	-13	NA	33578779	33523534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_33527367_33534832_33534993_33546058_33546203_33549206_33549384_33561026_33561180_33576053_33577161_33578755
WTC11_00073842	chr5	-	3177	6	NNC	ENSG00000242110.8	novel	1195	6	NA	NA	-44	0	intron_retention	TRUE	non_canonical	0	0	junction_5	34.7044665713219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	-34007124	True	NA	NA	False	AATAAA	-20	NA	34008148	33987173	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772_34008102_34008121
WTC11_00073843	chr5	-	5202	9	NNC	ENSG00000215158.9	novel	5001	6	NA	NA	-384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.2045210060797	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTTAGTCTGTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34245180	34164697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_34168476_34169026_34169154_34175444_34175538_34175821_34175958_34179012_34179098_34182679_34182868_34218294_34218451_34239374_34239449_34244615
WTC11_00073846	chr5	-	11542	10	FSM	ENSG00000113494.17	ENST00000618457.5	11581	10	0	39	0	-39	multi-exon	FALSE	canonical	0	0	junction_8	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTTTAAATTGACTTAA	-35230451	True	NA	NA	False	NA	NA	NA	35230487	35055740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_35066103_35068215_35068286_35068778_35068879_35070123_35070266_35072574_35072745_35084469_35084640_35086207_35086341_35089550_35089664_35118060_35118123_35230267
WTC11_00073847	chr5	-	2056	5	NIC	ENSG00000145626.12	novel	4918	7	NA	NA	49	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.48074069840786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTGTAATAAAACTGTC	-35991152	False	NA	NA	False	AATAAA	-8	NA	35991285	35953115	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_35954479_35955644_35955865_35957187_35957420_35988449_35988552_35991146
WTC11_00073848	chr5	-	543	1	FSM	ENSG00000270558.1	ENST00000603896.1	529	1	0	-14	0	14	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAAGTAGTTCGGGTT	-37286956	False	NA	-9	True	AATAAA	-21	NA	37286977	37286434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37286400_37287000
WTC11_00073850	chr5	-	1762	8	FSM	ENSG00000164327.13	ENST00000513566.1	1762	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	5.0548017179869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGGCTCTGTGTTTTGCT	-39071448	True	NA	NA	False	AATAAA	-11	NA	39074399	38980879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
WTC11_00073852	chr5	-	637	3	FSM	ENSG00000145592.14	ENST00000509877.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4326.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGTCACATAGAGCTT	-40714333	True	NA	NA	False	NA	NA	NA	40835212	40832102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40834470_40834607_40835182
WTC11_00073853	chr5	-	638	4	FSM	ENSG00000145592.14	ENST00000507642.5	425	4	-213	0	-213	0	multi-exon	FALSE	canonical	1	13	junction_2	5968.18567256601	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTAAGGTATTTTTA	-40834771	False	NA	-25	True	AATAAA	-29	NA	40834820	40832447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40833960_40834038_40834180_40834266_40834470
WTC11_00073854	chr5	-	553	3	FSM	ENSG00000145592.14	ENST00000508493.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	8653	junction_2	2150	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGGATATTGTCATG	-40714333	True	NA	NA	False	NA	NA	NA	40835212	40833878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40834266_40834470_40834607_40835182
WTC11_00073856	chr5	-	770	2	FSM	ENSG00000177738.5	ENST00000665537.1	768	2	0	-2	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-43067293	True	NA	-1	True	GATAAA	-40	NA	43067436	43014730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43015151_43067086
WTC11_00073857	chr5	-	646	3	FSM	ENSG00000177738.5	ENST00000503152.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-43067309	True	NA	-1	True	GATAAA	-40	NA	43067452	43014730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43015151_43067086_43067158_43067297
WTC11_00073859	chr5	-	2896	5	FSM	ENSG00000151881.15	ENST00000500337.6	2950	5	0	54	0	-54	multi-exon	FALSE	canonical	1	2	junction_3	28.6912443090222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGTCTTAAAAAATAAA	-43482497	True	NA	NA	False	NA	NA	NA	43483836	43444305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43446558_43453657_43454044_43476113_43476259_43479889_43479988_43483821
WTC11_00073860	chr5	-	2270	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	8	7	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	16.3530268636514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTAATTCTTATTTC	-43513447	True	NA	-2	True	AATAAA	-22	NA	43515140	43486701	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
WTC11_00073861	chr5	-	1695	1	FSM	ENSG00000249855.1	ENST00000513637.1	1382	1	-38	-275	-38	275	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTTTAATGAGAAA	NA	False	NA	78	True	NA	NA	NA	43496492	43494797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43494800_43496500
WTC11_00073864	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	-44808378	True	NA	NA	False	NA	NA	NA	44808741	44745137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44745409_44745941_44746039_44808641
WTC11_00073866	chr5	-	2773	2	ISM	ENSG00000170571.12	ENST00000508934.5	1617	9	-105	27194	-105	-22615	5prime_fragment	FALSE	canonical	3	225	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTGCCAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	50441455	50425870	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_50428228_50441039
WTC11_00073867	chr5	-	2330	4	NIC	ENSG00000185305.12	novel	3328	5	NA	NA	13	-837	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.1175852762009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCCCTGCAAGTTCAT	-54309030	True	NA	-3	True	AATAAA	-15	NA	54310560	53884781	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_53886714_54113201_54113411_54154579_54154640_54310431
WTC11_00073869	chr5	-	2640	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	37.3609400811864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGCATAAGAACAAGAATG	-55709391	True	NA	65	True	NA	NA	NA	55712261	55625779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
WTC11_00073870	chr5	-	2742	18	NNC	ENSG00000177058.12	novel	2522	16	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_15	48.4321663823169	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCCTCTTTTATTTCT	-55709409	True	NA	-4	True	AATAAA	-25	NA	55712279	55625848	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702892_55704321_55704435_55711451_55711500_55712216
WTC11_00073875	chr5	-	1499	12	NIC	ENSG00000049167.16	novel	2236	13	NA	NA	0	-286	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	35.1567916624939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTACCTCAGTTGTGAC	-60943289	True	NA	81	True	NA	NA	NA	60945051	60874353	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904787_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
WTC11_00073878	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	150.00550954069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
WTC11_00073879	chr5	-	2772	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	12	0	-2	0	multi-exon	FALSE	canonical	3	467	junction_1	31.9231890637511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398195	True	NA	-23	True	AGTAAA	-17	NA	62403931	62388526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
WTC11_00073880	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	159.399780426449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-62398162	True	NA	NA	False	AATAAA	-23	NA	62403898	62391716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
WTC11_00073882	chr5	-	490	1	FSM	ENSG00000217416.4	ENST00000426679.1	387	1	19	-122	19	122	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTGTTGGATTCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	62777244	62776754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62776800_62777200
WTC11_00073884	chr5	-	1030	5	FSM	ENSG00000123219.13	ENST00000510354.1	1124	5	0	94	0	-94	multi-exon	FALSE	canonical	3	19	junction_1	152.123921524526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGATCTTACTATTTTA	-65558464	False	NA	-98	True	NA	NA	NA	65561564	65550560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65551243_65551563_65551637_65552492_65552550_65554796_65554947_65561496
WTC11_00073885	chr5	-	405	1	FSM	ENSG00000250669.1	ENST00000515142.1	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCAAAGTGCATCTGC	NA	False	NA	NA	False	CATAAA	-28	NA	67690437	67690032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67690000_67690400
WTC11_00073886	chr5	-	1735	13	FSM	ENSG00000183323.13	ENST00000511257.1	1735	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.13235875607248	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCCTGCCTCAGCCTC	-69331941	True	NA	NA	False	NA	NA	NA	69332793	69282476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69283035_69285336_69285468_69292187_69292363_69294792_69294901_69300011_69300128_69303846_69303930_69306816_69306903_69307950_69308029_69311117_69311205_69313984_69314044_69320236_69320346_69320464_69320581_69332764
WTC11_00073888	chr5	-	1330	2	FSM	ENSG00000273841.6	ENST00000687205.1	1331	2	0	1	0	0	multi-exon	FALSE	canonical	3	1541	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-69366763	False	NA	-7	True	AATAAA	-16	NA	69366821	69364743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502
WTC11_00073889	chr5	-	3388	1	FSM	ENSG00000288349.1	ENST00000672116.1	2970	1	-576	158	-576	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCTGCCACCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	70779051	70775663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70775700_70779100
WTC11_00073890	chr5	-	1655	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	0	66	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	193.967305377879	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTAGGCTGGGCGCT	NA	False	NA	NA	False	NA	NA	NA	71067674	71035262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
WTC11_00073891	chr5	-	1755	17	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	0	66	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	206.011746858644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTAGGCTGGGCGCT	NA	False	NA	NA	False	NA	NA	NA	71067676	71035262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
WTC11_00073892	chr5	-	956	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	30	6961	4	-20	5prime_fragment	FALSE	canonical	3	230	junction_7	157.878666923013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGTTGGTTGTACCTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	71067644	71055049	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
WTC11_00073893	chr5	-	1372	5	FSM	ENSG00000230847.4	ENST00000445744.3	679	5	4	-697	4	697	multi-exon	FALSE	canonical	3	74	junction_1	48.9285192909003	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTAGAATTTTGTGTG	NA	False	NA	NA	False	AATATA	-33	NA	71093189	71073527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71074327_71076310_71076353_71079796_71079969_71082776_71082993_71093046
WTC11_00073897	chr5	-	4813	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	8	0	-8	multi-exon	FALSE	canonical	0	0	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCATTATGTGTGTGG	-74639794	True	NA	-8	True	AATAAA	-14	NA	74640728	74627416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74629993_74634683_74636499_74640306
WTC11_00073902	chr5	-	555	1	FSM	ENSG00000254893.6	ENST00000506621.3	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTAAATGCATTGTAGC	NA	False	NA	NA	False	AAAAAG	-22	NA	76174183	76173628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_76173600_76174200
WTC11_00073904	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	77.181668808079	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	-77492170	False	NA	1	True	AATAGA	-22	NA	77492199	77432812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
WTC11_00073905	chr5	-	949	10	FSM	ENSG00000164253.14	ENST00000509701.5	949	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.5321486183145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGGCAGTGTACGCA	-77492191	False	1594	NA	False	NA	NA	NA	77492220	77437406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77437425_77438239_77438362_77440812_77440998_77449759_77449861_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
WTC11_00073906	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1216.04029538498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	-77732248	True	NA	-55	True	NA	NA	NA	77776261	77691266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
WTC11_00073907	chr5	-	3986	27	FSM	ENSG00000132842.14	ENST00000519295.5	3986	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_26	50.136219767194	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	-78290780	True	NA	0	True	AATAAA	-18	NA	78294692	78002325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294439
WTC11_00073908	chr5	-	1182	5	FSM	ENSG00000132842.14	ENST00000522901.1	1170	5	0	-12	0	0	multi-exon	FALSE	canonical	2	7	junction_1	109.344638643145	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	NA	False	NA	0	True	AATAAA	-18	NA	78039150	78002325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78003078_78015409_78015549_78020691_78020790_78034360_78034446_78039042
WTC11_00073910	chr5	-	7753	7	NIC	ENSG00000177034.17	novel	7931	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	22.6231199341637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-79989320	True	NA	0	True	AATAAA	-29	NA	79991243	79976715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79991157
WTC11_00073912	chr5	-	1200	8	NNC	ENSG00000164300.17	novel	547	4	NA	NA	0	-8379	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	22.5162073146597	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTTGTTTCCTCTTTT	-80242339	True	NA	NA	False	AATAAA	-18	NA	80256019	80165372	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80165617_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
WTC11_00073913	chr5	-	5388	6	NNC	ENSG00000189127.8	novel	542	6	NA	NA	-135	113	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5.30659966456864	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTTGCTATTCTCAAA	-80570244	True	NA	NA	False	AATAAA	-22	NA	80570415	80556641	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80560043_80563734_80563816_80564383_80565827_80566688_80566772_80568959_80569078_80570153
WTC11_00073915	chr5	-	1719	7	FSM	ENSG00000228716.7	ENST00000505337.5	1719	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	297.651222070396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCTAGTCTCGAACT	-80653275	False	NA	NA	False	NA	NA	NA	80654674	80628016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80628939_80629038_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
WTC11_00073917	chr5	-	1989	2	FSM	ENSG00000247572.9	ENST00000690798.1	2066	2	71	6	-1	-2	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTGATGTGTGTT	-81299393	True	NA	-20	True	AGTAAA	-11	NA	81301486	81237566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81239356_81301286
WTC11_00073918	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	39.789288759665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	-81751234	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
WTC11_00073920	chr5	-	1643	16	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	41.8420309683404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAAATTGCGTCTGATG	-81749713	True	NA	-38	True	AATAAA	-20	NA	81751097	81419939	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81650266_81650340_81750980
WTC11_00073923	chr5	-	273	1	FSM	ENSG00000251374.1	ENST00000510378.1	103	1	80	-250	80	250	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGCTTATTGTCACA	-82265168	False	NA	NA	False	NA	NA	NA	82265179	82264906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82264900_82265200
WTC11_00073924	chr5	-	3142	5	FSM	ENSG00000186468.13	ENST00000651545.1	3142	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5592.05653136661	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTGAATAAAGCCCTTC	-82082983	True	NA	-39	True	NA	NA	NA	82278368	82273348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82275114_82275208_82276256_82276397_82276519_82277692_82277853_82278319
WTC11_00073932	chr5	-	3446	10	FSM	ENSG00000081189.16	ENST00000510942.5	3446	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.21665970480667	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAACCTCTCTATGTCC	-88883158	False	NA	NA	False	AATAAA	-31	NA	88883184	88720828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88722830_88728492_88728629_88729217_88729348_88731728_88731902_88749069_88749118_88751856_88752044_88761184_88761329_88804597_88804802_88823734_88823928_88882954
WTC11_00073936	chr5	-	1945	6	FSM	ENSG00000237187.9	ENST00000656921.1	2659	6	0	714	0	-41	multi-exon	FALSE	canonical	0	0	junction_1	3.44093010681705	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATATAACTGTAGATAC	-93570479	False	NA	NA	False	NA	NA	NA	93570575	93410080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93411510_93553760_93553864_93554873_93554996_93563363_93563464_93569889_93570003_93570497
WTC11_00073937	chr5	-	590	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	1	0	1	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	-93422326	True	NA	-15	True	AATAAA	-4	NA	93422422	93411032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93411510_93422309
WTC11_00073938	chr5	-	3157	1	FSM	ENSG00000251023.1	ENST00000505668.1	3157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93863825	93860668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93860700_93863800
WTC11_00073941	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	125	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	-95819912	True	NA	-1	True	AATAAA	-24	NA	95822714	95813970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95814958_95816506_95816627_95822455
WTC11_00073942	chr5	-	461	3	FSM	ENSG00000164307.13	ENST00000503311.1	463	3	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_1	4.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTACAGTATCTCCAGA	NA	False	NA	NA	False	TTTAAA	-6	NA	96793669	96790584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96790644_96792060_96792193_96793399
WTC11_00073945	chr5	-	3576	2	FSM	ENSG00000250682.6	ENST00000662437.1	1827	2	206	-1955	0	1955	multi-exon	FALSE	canonical	1	5	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGTTTTCCAATTTAT	-102671486	False	NA	NA	False	NA	NA	NA	102671559	102606523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_102609767_102671226
WTC11_00073946	chr5	-	3430	7	NIC	ENSG00000112874.10	novel	3488	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	38.8261795985933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	-103561485	True	NA	-4	True	ATTAAA	-14	NA	103562789	103548854	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560251_103562702
WTC11_00073947	chr5	-	655	2	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-104070100	False	NA	-3	True	AATAAA	-16	NA	104070119	104063676	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_104064095_104069882
WTC11_00073950	chr5	-	3606	2	NNC	ENSG00000184349.14	novel	5372	5	NA	NA	8084	12354	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGGCACCTGATGG	NA	False	NA	NA	False	AAAAAG	-10	NA	107380469	107364539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_107364579_107376902
WTC11_00073951	chr5	-	5190	9	FSM	ENSG00000145743.18	ENST00000542267.7	5198	9	0	8	0	-8	multi-exon	FALSE	canonical	0	0	junction_2	5.03580926962092	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACACTGTGTCTTT	-108382050	False	NA	NA	False	AATAAA	-5	NA	108382098	107859042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_107861861_107881036_107881180_108020924_108021002_108186116_108186248_108224120_108224229_108348398_108348531_108364737_108364996_108367830_108367954_108380698
WTC11_00073952	chr5	-	529	1	FSM	ENSG00000271849.1	ENST00000606424.1	528	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCGTGTAAAATGGTG	-109688255	False	NA	0	True	ATTAAA	-17	NA	109688329	109687800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109687800_109688300
WTC11_00073954	chr5	-	869	1	FSM	ENSG00000214784.4	ENST00000461022.1	817	1	-11	-41	-11	41	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATATATATATA	NA	False	NA	NA	False	AATAAA	-13	NA	111193053	111192184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111192200_111193100
WTC11_00073955	chr5	-	585	3	FSM	ENSG00000248268.1	ENST00000504081.1	565	3	0	-20	0	20	multi-exon	FALSE	canonical	0	0	junction_2	1	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAGATAGCT	NA	False	NA	NA	False	AAAAAG	-12	NA	111302567	111277496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111277581_111282892_111283037_111302210
WTC11_00073956	chr5	-	4528	7	NNC	ENSG00000164211.13	novel	4631	6	NA	NA	62	71598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.009634216535	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGAAGATGCATATATG	-111512399	False	NA	NA	False	NA	NA	NA	111512409	111424434	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_111424464_111496038_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
WTC11_00073957	chr5	-	4706	23	FSM	ENSG00000129595.14	ENST00000261486.6	4670	23	-36	0	0	0	multi-exon	FALSE	canonical	2	15	junction_21	6.44060594654553	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTTGTCGTTTCCTGC	-112419095	False	NA	0	True	AATAAA	-20	NA	112419313	112162618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_112165119_112168738_112168821_112168994_112169106_112170300_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420_112205505_112209891_112209983_112234633_112234756_112239659_112239738_112240718_112240811_112259228_112259293_112259890_112259980_112262493_112262582_112264895_112265017_112266232_112266331_112275325_112275405_112280271_112280324_112307385_112307491_112418940
WTC11_00073960	chr5	-	3999	11	NNC	ENSG00000152503.10	novel	4156	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	27.507998836702	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-115168078	False	NA	-27	True	AATAAA	-37	NA	115169730	115124771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115148140_115148162_115163517_115163753_115169607
WTC11_00073961	chr5	-	1132	1	FSM	ENSG00000250472.1	ENST00000503723.1	881	1	67	-318	67	318	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCCATCTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115149577	115148445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115148400_115149600
WTC11_00073962	chr5	-	2821	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	0	18435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.400309871146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACATGGAATATCATCCA	-115258533	True	NA	NA	False	AATATA	-14	NA	115262865	115185576	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115185695_115210846_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
WTC11_00073963	chr5	-	200	1	FSM	ENSG00000243304.3	ENST00000497612.3	796	1	505	91	505	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTGTATTCACCAAGT	NA	False	NA	NA	False	NA	NA	NA	115264959	115264759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115264800_115265000
WTC11_00073964	chr5	-	757	5	FSM	ENSG00000164221.13	ENST00000503027.1	753	5	0	-4	0	0	multi-exon	FALSE	canonical	2	4	junction_4	55.3731658838467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCCAACATTTATGGAA	-115295027	True	NA	NA	False	CATAAA	-2	NA	115296623	115275334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115296426
WTC11_00073967	chr5	-	563	7	FSM	ENSG00000092421.17	ENST00000515009.5	563	7	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_6	451.759799746134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAATGGCCAGATGCCCAT	NA	False	NA	NA	False	NA	NA	NA	116536428	116491795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116536382
WTC11_00073968	chr5	-	619	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGACTGCCTGTT	-122474777	False	NA	NA	False	AATAAA	-26	NA	122474840	122474221	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_122474200_122474800
WTC11_00073969	chr5	-	634	2	NNC	ENSG00000250328.6	novel	1424	6	NA	NA	61	-20004	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_1	0	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACAGCTTTATTGCTCA	-122478757	True	NA	NA	False	NA	NA	NA	122478820	122474251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_122474651_122478585
WTC11_00073971	chr5	-	9530	16	FSM	ENSG00000168944.17	ENST00000675283.1	4420	16	-1092	-4018	-25	4013	multi-exon	TRUE	canonical	0	0	junction_13	31.6810493653365	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGCCTACCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	123400674	123340876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135
WTC11_00073972	chr5	-	5025	21	FSM	ENSG00000168944.17	ENST00000675686.1	5020	21	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_13	41.7687383098891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTCTTGAGCAGCCT	-123420546	True	NA	-4	True	AATAAA	-19	NA	123423324	123344889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422466_123422576_123422949
WTC11_00073975	chr5	-	2404	8	NIC	ENSG00000168916.16	novel	3190	8	NA	NA	22	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	26.733759136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATAATGGCTTCT	-124747457	True	NA	7	True	ATTAAA	-11	NA	124748785	124636926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124649609_124649698_124701013_124701270_124748532
WTC11_00073977	chr5	-	8145	1	FSM	ENSG00000251456.1	ENST00000507630.1	558	1	-6218	-1369	-6218	1369	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAACAGAAAAAAAAAAAA	-124741382	False	NA	NA	False	NA	NA	NA	124741393	124733248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124733200_124741400
WTC11_00073981	chr5	-	478	5	FSM	ENSG00000164241.14	ENST00000607731.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.8432380351327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATGAAGCCTATTC	-127073028	True	NA	NA	False	AATAAA	-19	NA	127073467	127051303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127051485_127052612_127052670_127058881_127059003_127071583_127071686_127073450
WTC11_00073985	chr5	-	2300	4	FSM	ENSG00000245937.9	ENST00000514409.6	2318	4	0	18	0	-18	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACACCTGTAATCCCAGC	-128082787	True	NA	NA	False	AATACA	-22	NA	128083097	127939267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082969
WTC11_00073986	chr5	-	2538	4	FSM	ENSG00000245937.9	ENST00000499346.7	2654	4	0	116	0	-18	multi-exon	FALSE	canonical	0	0	junction_2	6.0184900284226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACACCTGTAATCCCAGC	-128082790	True	NA	NA	False	AATACA	-22	NA	128083100	127939267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082734
WTC11_00073987	chr5	-	5685	34	ISM	ENSG00000138829.12	ENST00000262464.9	10927	65	26	70189	4	-28	5prime_fragment	FALSE	canonical	3	33	junction_21	14.9581601968233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAATTCACATTATATAT	-128532491	True	NA	NA	False	ATTAAA	-7	NA	128538219	128328097	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_128328822_128330572_128330696_128332911_128333035_128334718_128334845_128335169_128335296_128335454_128335578_128335987_128336114_128337996_128338123_128338932_128339062_128344384_128344511_128345356_128345585_128349346_128349473_128349954_128350006_128350867_128351006_128357275_128357396_128361722_128361849_128364599_128364726_128366376_128366431_128369181_128369335_128374627_128374751_128376730_128376854_128377751_128377878_128378770_128378891_128392017_128392156_128393134_128393369_128395121_128395275_128408673_128408800_128446480_128446607_128464723_128464922_128519272_128519369_128527871_128527968_128530594_128530694_128536401_128536485_128537349
WTC11_00073988	chr5	-	795	1	FSM	ENSG00000275939.1	ENST00000613162.1	166	1	-556	-73	-556	73	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTGCAGACAAACTAATA	-131440742	False	NA	NA	False	NA	NA	NA	131440752	131439957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131440000_131440800
WTC11_00073989	chr5	-	1714	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	6	0	-6	multi-exon	FALSE	canonical	3	18	junction_1	7.58287544405155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTCTAAAGCATCTC	-131794919	True	NA	NA	False	AATAAA	-17	NA	131797016	131677602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
WTC11_00073990	chr5	-	2202	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	35.1917919723083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226466	True	NA	0	True	AATAAA	-24	NA	132227835	132192609	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
WTC11_00073991	chr5	-	2628	16	FSM	ENSG00000072682.20	ENST00000379100.7	2625	16	0	-3	0	0	multi-exon	FALSE	canonical	1	9	junction_14	49.0716482978376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226466	True	NA	0	True	AATAAA	-24	NA	132227835	132192609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132226696_132227259_132227789
WTC11_00073992	chr5	-	336	2	FSM	ENSG00000131437.16	ENST00000488471.1	445	2	109	0	109	0	multi-exon	FALSE	canonical	3	33	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTCAATTAATGGAAG	NA	False	NA	42	True	ATTAAA	-18	NA	132699371	132696547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132696683_132699170
WTC11_00073993	chr5	-	2636	10	FSM	ENSG00000164402.14	ENST00000378719.7	2751	10	0	115	0	-115	multi-exon	FALSE	canonical	0	0	junction_7	79.9833315968604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATCCTCAGCAGCTC	-132775400	True	NA	NA	False	AATATA	-32	NA	132777239	132750933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132752182_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
WTC11_00073995	chr5	-	9247	21	NIC	ENSG00000072364.13	novel	9536	21	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_20	5.74020905542647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTACTGAACACTGT	NA	False	NA	-37	True	AATAAA	-21	NA	132937740	132875399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132881187_132883339_132883561_132885075_132885120_132886309_132886404_132887520_132887593_132887845_132887983_132888096_132888161_132889078_132889174_132892163_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132937648
WTC11_00073996	chr5	-	2146	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	5	-1543	1	0	multi-exon	FALSE	canonical	3	82	junction_2	121.444088644391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-133021677	True	NA	-4	True	AATAAA	-29	NA	133026544	132996984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
WTC11_00073998	chr5	-	5396	16	FSM	ENSG00000053108.17	ENST00000265342.12	5396	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	2.74388208363422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATAGTTTTTTTTTTCC	-133612435	True	NA	NA	False	AATAAA	-17	NA	133612541	133196454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133199798_133201932_133202043_133210190_133210299_133217228_133217379_133220747_133220867_133224189_133224217_133225149_133225285_133225657_133225820_133233416_133233538_133249409_133249577_133312653_133312778_133316458_133316653_133400737_133400987_133567185_133567220_133603857_133603994_133612324
WTC11_00073999	chr5	-	1855	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	-16	0	16	multi-exon	FALSE	canonical	3	32	junction_8	683.237593648798	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTCATGCTCTGTG	-134004962	False	NA	1	True	AATAAA	-33	NA	134004975	133971854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
WTC11_00074000	chr5	-	564	3	FSM	ENSG00000113575.10	ENST00000231504.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	884.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGAGCATCCATAAATC	-134205563	True	NA	NA	False	NA	NA	NA	134226073	134203524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134203565_134205921_134206132_134225759
WTC11_00074001	chr5	-	702	3	ISM	ENSG00000006837.12	ENST00000519312.5	1198	9	51663	21443	5	120	internal_fragment	FALSE	canonical	2	10	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTATTTTTGAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	134319384	134307880	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_134308467_134312291_134312381_134319357
WTC11_00074002	chr5	-	772	3	FSM	ENSG00000006837.12	ENST00000520592.1	652	3	0	-120	0	120	multi-exon	FALSE	canonical	1	1	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTATTTTTGAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	134319389	134307880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134308467_134308573_134308728_134319357
WTC11_00074003	chr5	-	745	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	-39	-120	0	120	multi-exon	TRUE	canonical	1	2	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTATTTTTGAAGA	-134370822	True	NA	NA	False	ATTAAA	-19	NA	134371043	134307880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134308467_134321790_134321904_134370997
WTC11_00074004	chr5	-	542	2	Antisense	novelGene_ENSG00000043143.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAAGTTGTTGTTGCAT	-134526873	True	NA	-3	True	AATAAA	-22	NA	134527063	134526283	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_134526709_134526946
WTC11_00074005	chr5	-	385	1	FSM	ENSG00000241179.1	ENST00000473936.1	355	1	26	-56	26	56	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTTAAAATAAAAAGCATAT	NA	False	NA	NA	False	AATAAA	-32	NA	134805106	134804721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134804700_134805100
WTC11_00074006	chr5	-	918	1	FSM	ENSG00000244921.2	ENST00000501056.2	747	1	-40	-131	-40	131	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTTACTAGCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	134924089	134923171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134923200_134924100
WTC11_00074007	chr5	-	349	1	FSM	ENSG00000248923.1	ENST00000511037.1	1812	1	948	515	948	-515	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCTCGCTTCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	134925511	134925162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134925200_134925500
WTC11_00074008	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	305.193381317485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	-135389281	True	NA	9	True	NA	NA	NA	135399211	135334409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
WTC11_00074010	chr5	-	859	3	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	9.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	-136570290	True	NA	0	True	AATAAA	-22	NA	136570887	136565375	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_136565798_136568530_136568729_136570648
WTC11_00074015	chr5	-	2919	20	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	193	junction_11	165.064228244594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGCTTGTTCTGTGT	-138168665	True	NA	-2	True	AATAAA	-17	NA	138178617	138156883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00074017	chr5	-	3107	20	NIC	ENSG00000112983.18	novel	3005	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	179.423021094326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-138178650	True	NA	-33	True	TTTAAA	-25	NA	138178953	138156914	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00074019	chr5	-	1978	13	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_11	46.0760241340331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329440	True	NA	-12	True	AATAAA	-16	NA	138331788	138285268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138330986_138331215_138331594
WTC11_00074021	chr5	-	4316	17	FSM	ENSG00000113013.16	ENST00000677553.1	4316	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	698.105606265986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533426	True	NA	NA	False	CATAAA	-25	NA	138575318	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573846_138574067_138574127_138575237
WTC11_00074022	chr5	-	4329	17	FSM	ENSG00000113013.16	ENST00000678794.1	4329	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	701.263045778829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533448	True	NA	NA	False	CATAAA	-25	NA	138575340	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573776_138573851_138574067_138574127_138575237
WTC11_00074023	chr5	-	4449	17	FSM	ENSG00000113013.16	ENST00000677988.1	4449	17	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_16	677.076239706431	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533511	True	NA	NA	False	CATAAA	-25	NA	138575403	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
WTC11_00074024	chr5	-	4345	16	FSM	ENSG00000113013.16	ENST00000649578.2	4345	16	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_11	700.171198112766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533524	True	NA	NA	False	CATAAA	-25	NA	138575416	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00074025	chr5	-	4327	16	FSM	ENSG00000113013.16	ENST00000677425.1	4327	16	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_8	699.26044742523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533525	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00074026	chr5	-	4196	16	FSM	ENSG00000113013.16	ENST00000677064.1	4196	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	679.802736093346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533529	True	NA	NA	False	CATAAA	-25	NA	138575421	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00074027	chr5	-	4814	16	FSM	ENSG00000113013.16	ENST00000677693.1	4814	16	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_15	695.372577991268	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533539	True	NA	NA	False	CATAAA	-25	NA	138575431	138553755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
WTC11_00074032	chr5	-	1335	5	NNC	ENSG00000113068.10	novel	1336	4	NA	NA	0	783	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.844765853509	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCTTGGCTGGCC	-140295745	True	NA	NA	False	NA	NA	NA	140303101	140244251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_140244277_140245060_140246058_140281448_140281534_140300415_140300583_140303040
WTC11_00074037	chr5	-	2229	3	FSM	ENSG00000170445.16	ENST00000674819.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATTGTTCACCAAATC	-140683026	True	NA	NA	False	NA	NA	NA	140691377	140688797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140690774_140690854_140690945_140691214
WTC11_00074042	chr5	-	3169	10	NNC	ENSG00000131504.18	novel	4668	27	NA	NA	62	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	125.447642907753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGAATTTCT	-141534409	True	NA	-1	True	AATAAA	-24	NA	141534426	141515011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334
WTC11_00074043	chr5	-	829	3	FSM	ENSG00000171720.10	ENST00000469207.5	829	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	661.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACTGTTTTTATCCAA	-141626059	False	NA	-67	True	NA	NA	NA	141626070	141620924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141626012
WTC11_00074048	chr5	-	5167	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	41.8524076181705	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTCTCATTCATTCAT	-141675853	True	NA	-4	True	AATAAA	-18	NA	141682230	141653400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
WTC11_00074050	chr5	-	3734	3	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	410	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	182.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	-141878599	True	NA	-3	True	AATAAA	-17	NA	141878836	141862651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141865428_141868568_141869432_141878741
WTC11_00074053	chr5	-	5364	1	FSM	ENSG00000187678.10	ENST00000643792.1	5349	1	0	-15	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	-142315752	False	NA	-1	True	TATAAA	-34	NA	142315790	142310426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142310400_142315800
WTC11_00074055	chr5	-	551	3	FSM	ENSG00000186314.12	ENST00000510594.1	552	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTTGCATGAGTAAAAT	NA	False	NA	NA	False	AATAAA	-33	NA	145796531	145703904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_145704296_145764930_145765001_145796441
WTC11_00074057	chr5	-	9953	14	FSM	ENSG00000133706.19	ENST00000506231.6	9953	14	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_9	178.451624393057	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146146295	False	NA	-46	True	NA	NA	NA	146146360	146110565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471
WTC11_00074063	chr5	-	1115	4	FSM	ENSG00000164266.11	ENST00000296695.10	413	4	-705	3	-705	-3	multi-exon	FALSE	canonical	2	4	junction_1	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTTTCCATTTG	NA	False	NA	NA	False	AATAAA	-13	NA	147832376	147824584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522
WTC11_00074064	chr5	-	1152	3	Genic_Genomic	ENSG00000288774.1	novel	218	1	NA	NA	34	4279	multi-exon	FALSE	canonical	3	45	junction_1	8	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTACAAGATCAGATGAGC	-147872733	True	NA	37	True	NA	NA	NA	147874297	147869834	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_147870435_147872169_147872354_147873929
WTC11_00074066	chr5	-	8636	2	FSM	ENSG00000230551.4	ENST00000499521.2	8636	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTGTGCTTATCCTCT	-149504602	False	NA	-21	True	AATAAA	-42	NA	149504670	149494313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149499294_149501014
WTC11_00074068	chr5	-	657	2	FSM	ENSG00000164296.7	ENST00000532987.1	657	2	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGATTTGGCTCTTG	-150000384	True	NA	-20	True	AATAAA	-27	NA	150000653	149999839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150000317_150000473
WTC11_00074070	chr5	-	614	5	FSM	ENSG00000132912.13	ENST00000518909.1	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	13.0862523283024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGCATTTTGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	150731310	150718275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043
WTC11_00074072	chr5	-	498	5	NNC	ENSG00000177556.12	novel	471	4	NA	NA	0	62099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	363.394069847046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTCCACTATTCTCT	-151753489	True	NA	NA	False	NA	NA	NA	151758631	151680216	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_151680244_151742821_151742960_151746278_151746450_151751703_151751780_151758545
WTC11_00074080	chr5	-	3575	8	FSM	ENSG00000135083.17	ENST00000643836.1	3560	8	0	-15	0	0	multi-exon	FALSE	canonical	0	0	junction_5	88.3797465024467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTCCTAGGCATCCC	-160309823	True	NA	-1	True	AATAAA	-26	NA	160312556	160251651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160253799_160254128_160254336_160255548_160255709_160259468_160259772_160280524_160280739_160294727_160294964_160311857_160311973_160312363
WTC11_00074081	chr5	-	2911	5	NIC	ENSG00000135083.17	novel	5709	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	81.5567287230183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCTCTTGTCCTAGGC	-160309821	True	NA	-6	True	AATAAA	-21	NA	160312554	160251656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_160253799_160255548_160255709_160259468_160259772_160311857_160311973_160312363
WTC11_00074085	chr5	-	1871	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	12	446	combination_of_known_junctions	FALSE	canonical	3	129	junction_3	566.775087667057	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGTTAATGTAAATTT	-163450257	True	NA	92	True	AATAAA	-32	NA	163460090	163453476	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
WTC11_00074093	chr5	-	3855	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	-313	15	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	38.3374490544168	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGCTGCCCGTGTCTT	-176536633	False	NA	-2	True	AATAAA	-33	NA	176536643	176526696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536462
WTC11_00074094	chr5	-	3673	11	NNC	ENSG00000146083.12	novel	1647	11	NA	NA	14	15	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	43.7562566954716	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGCTGCCCGTGTCTT	-176535611	True	NA	-2	True	AATAAA	-33	NA	176537866	176526696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531558_176532003_176532130_176532365_176532517_176537730
WTC11_00074099	chr5	-	2450	8	NIC	ENSG00000087206.17	novel	1334	11	NA	NA	9180	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	60.36081983728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTTAGCCCTGCAGTT	NA	False	NA	-64	True	NA	NA	NA	176959709	176905192	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176951473_176951578_176955958_176956036_176958092
WTC11_00074102	chr5	-	1857	4	FSM	ENSG00000213347.11	ENST00000503782.1	1854	4	0	-3	0	3	multi-exon	FALSE	canonical	3	99	junction_3	8.17856276425687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	-177311364	False	NA	-5	True	ATTAAA	-20	NA	177311875	177307204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307704_177307780_177307965_177310425_177311485_177311760
WTC11_00074105	chr5	-	2463	14	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	125	junction_8	114.152964956168	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCCTTCCCCTGTGCA	-177488861	True	NA	-2	True	AATAAA	-21	NA	177497573	177483389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
WTC11_00074116	chr5	-	853	2	FSM	ENSG00000246596.7	ENST00000515045.1	853	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTTATGGCATCCTCAACA	-177671498	True	NA	NA	False	NA	NA	NA	177672209	177632074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177632739_177672020
WTC11_00074117	chr5	-	370	3	FSM	ENSG00000170074.19	ENST00000514899.1	370	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACATTTCATTGATTT	NA	False	NA	-48	True	AGTAAA	-21	NA	177714152	177713068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177713171_177713747_177713917_177714053
WTC11_00074125	chr5	-	2436	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	26.8373444207052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTGTTGTTGTTGT	-178625269	True	NA	-8	True	CATAAA	-11	NA	178627017	178602666	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
WTC11_00074132	chr5	-	2044	11	FSM	ENSG00000087116.16	ENST00000274609.5	2044	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	5.95399025864168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGGTGGCATTTAGTA	-179345194	True	NA	NA	False	AATAAA	-18	NA	179345430	179150887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179151201_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766_179344162_179345189
WTC11_00074134	chr5	-	2914	7	FSM	ENSG00000169045.17	ENST00000502904.5	2913	7	0	-1	0	0	multi-exon	FALSE	canonical	3	324	junction_1	27.6189347288333	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179618888	False	NA	-1	True	AATAAA	-21	NA	179618899	179614177	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144
WTC11_00074150	chr5	-	644	6	FSM	ENSG00000204628.12	ENST00000502905.5	643	6	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4984.51981237912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGTTTTTTTTTCTTA	-181242164	False	140427	-7	True	AATAAA	-22	NA	181242206	181236927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239486_181239583_181241491_181241640_181242173
WTC11_00074152	chr5	-	990	6	FSM	ENSG00000204628.12	ENST00000504128.5	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	4324.60150302892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181241597	False	NA	-16	True	AATAAA	-13	NA	181241639	181236936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237320_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491
WTC11_00074153	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4760.04238962432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103476	True	NA	-16	True	AATAAA	-13	NA	181243903	181236936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
WTC11_00074159	chr5	+	361	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGAGGGGGCCTGAAT	12661519	False	NA	NA	False	NA	NA	NA	12663729	12664090	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_12663700_12664100
WTC11_00074160	chr5	+	4279	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGAAGTAGAACAAGACA	NA	False	NA	NA	False	NA	NA	NA	12723818	12728097	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_12723800_12728100
WTC11_00074161	chr5	+	2885	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCATGGGGAAGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	14423924	14426809	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14423900_14426800
WTC11_00074162	chr5	+	12063	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACATGGAACTGAGTT	NA	False	NA	NA	False	TATAAA	-10	NA	18592667	18604730	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18592700_18604700
WTC11_00074163	chr5	+	1013	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCCAAACAACTTGACC	76359873	False	NA	NA	False	NA	NA	NA	76359934	76360947	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76359900_76360900
WTC11_00074164	chr5	+	2362	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGCAGATTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	102766927	102769289	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_102766900_102769300
WTC11_00074165	chr5	+	479	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGAGGATTTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	108552984	108553463	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108553000_108553500
WTC11_00074166	chr5	+	319	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGCTGGGAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	109050684	109051003	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_109050700_109051000
WTC11_00074167	chr5	+	2728	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCAATGTTTGAAGTTT	NA	False	NA	NA	False	AATATA	-42	NA	120737307	120740035	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_120737300_120740000
WTC11_00074176	chr5	+	2657	12	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38533	0	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_1	90.1292001921282	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	53608	False	NA	18	True	AATAAA	-29	NA	53634	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_53766_113250_113449_139482_140110_140224_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00074177	chr5	+	2713	11	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	74.8618060161522	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	92061	False	NA	18	True	AATAAA	-29	NA	92081	157110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_92277_113250_113449_139605_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
WTC11_00074183	chr5	+	591	2	FSM	ENSG00000180104.16	ENST00000509294.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACCAGGGCTGGCCTTG	469844	False	NA	NA	False	NA	NA	NA	469855	471581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_469988_471122
WTC11_00074184	chr5	+	2634	6	NIC	ENSG00000225138.8	novel	632	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	10.403845442912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	473737	False	NA	8	True	AATAAA	-22	NA	473747	480884	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_474047_475136_475320_476231_477466_477805_477850_479865_480217_480361
WTC11_00074185	chr5	+	746	8	FSM	ENSG00000071539.14	ENST00000513435.1	746	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	165.547946072972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCCAGATAAGG	886081	False	NA	NA	False	GATAAA	-31	NA	893641	908074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_893721_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987
WTC11_00074186	chr5	+	292	1	Genic_Genomic	ENSG00000286388.1	novel	NA	NA	NA	NA	5364	66	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAGAACATTTCCATT	NA	False	NA	74	True	NA	NA	NA	1350560	1350852	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_1350600_1350900
WTC11_00074189	chr5	+	9068	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACAAAGATGTTTTCC	7262316	False	NA	NA	False	AAAACA	-19	NA	7262338	7271406	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_7262300_7271400
WTC11_00074190	chr5	+	785	2	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7263509	False	NA	27	True	ATTAAA	-21	NA	7263813	7269295	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_7264177_7268873
WTC11_00074191	chr5	+	4266	24	NIC	ENSG00000078295.17	novel	6645	25	NA	NA	-1001	0	combination_of_known_junctions	TRUE	canonical	3	89	junction_19	208.501376965711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCAGAGTGTGGTCTG	7395125	False	NA	NA	False	AATACA	-2	NA	7395136	7820689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789658_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564
WTC11_00074194	chr5	+	1198	4	FSM	ENSG00000247516.8	ENST00000652260.1	1198	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	88.1564266265118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCGTAGTAAGATTT	8456820	True	NA	NA	False	AATAAA	-17	NA	8457705	8486930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_8457767_8459932_8460153_8479073_8479148_8486087
WTC11_00074198	chr5	+	567	3	FSM	ENSG00000038382.21	ENST00000504606.1	817	3	0	250	0	-250	multi-exon	FALSE	canonical	2	7	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGCCTTGAACCCCCA	NA	False	NA	NA	False	NA	NA	NA	14290976	14297263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14291229_14293011_14293135_14297071
WTC11_00074199	chr5	+	2433	15	ISM	ENSG00000038382.21	ENST00000515144.5	7455	43	23420	101318	23420	-103	internal_fragment	FALSE	canonical	2	10	junction_8	4.44294901145257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCAGTCTTTCAGAAT	NA	False	NA	NA	False	AATGAA	-30	NA	14316460	14387847	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731
WTC11_00074200	chr5	+	5756	23	NNC	ENSG00000038382.21	novel	11460	57	NA	NA	-12888	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	4.7605906293753	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTAGGCTTTTTA	NA	False	NA	6	True	ATTAAA	-14	NA	14461123	14510204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_14461312_14462754_14462926_14465544_14465641_14471317_14471467_14472591_14472659_14473993_14474098_14476893_14476964_14479260_14479351_14479918_14480012_14481233_14481285_14481540_14481619_14482581_14482774_14485068_14485247_14487463_14488261_14492566_14492815_14496878_14497006_14497846_14497875_14498088_14498252_14498518_14498641_14502578_14502658_14504392_14504594_14507121_14507261_14507879
WTC11_00074201	chr5	+	252	4	FSM	ENSG00000038382.21	ENST00000511019.1	430	4	0	178	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGCGGCTCTTGTTTTT	14479308	False	NA	NA	False	NA	NA	NA	14479320	14481618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14479351_14479918_14480012_14481233_14481285_14481540
WTC11_00074202	chr5	+	3797	10	FSM	ENSG00000038382.21	ENST00000344135.5	4065	10	268	0	268	0	multi-exon	FALSE	canonical	1	1	junction_1	5.24933858267454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTTAGGCTTTTT	14488704	False	NA	5	True	ATTAAA	-13	NA	14488715	14510203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14489070_14492566_14492815_14496878_14497018_14497846_14497875_14498088_14498252_14498518_14498641_14502578_14502658_14504392_14504594_14507121_14507261_14507879
WTC11_00074204	chr5	+	260	3	FSM	ENSG00000183666.18	ENST00000509649.5	362	3	-22	124	-5	-124	multi-exon	FALSE	canonical	3	35	junction_1	2	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGTTCAGATATTTG	21458274	True	NA	NA	False	AAAACA	-5	NA	21459474	21461866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21459585_21459677_21459744_21461782
WTC11_00074205	chr5	+	470	5	NIC	ENSG00000183666.18	novel	1706	8	NA	NA	0	-788	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	15.3195136998535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTTTCCACTTTTCAA	21458324	True	NA	NA	False	AATACA	-10	NA	21459524	21522462	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21522337
WTC11_00074208	chr5	+	2340	3	ISM	ENSG00000250337.8	ENST00000659860.1	1325	4	16	6093	1	1566	5prime_fragment	FALSE	canonical	3	51	junction_2	36.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGTACTAATCGATAT	27467047	True	NA	NA	False	AATAAA	-18	NA	27472295	27479593	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_27472520_27475534_27475696_27477638
WTC11_00074210	chr5	+	12301	4	NIC	ENSG00000250337.8	novel	1121	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_3	41.2148840428633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467103	True	NA	14	True	AATAAA	-26	NA	27472351	27496404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_27472520_27475534_27477802_27484925_27494336_27495948
WTC11_00074211	chr5	+	1121	6	FSM	ENSG00000250337.8	ENST00000668103.1	1121	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.2268435118735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467103	True	NA	14	True	AATAAA	-26	NA	27472351	27496404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27494234_27494336_27495948
WTC11_00074213	chr5	+	4883	3	FSM	ENSG00000133401.16	ENST00000513490.1	4883	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATTTTTTTTTTCTCT	NA	False	NA	2	True	AATAAA	-14	NA	32099173	32110926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32100964_32101104_32101240_32107968
WTC11_00074214	chr5	+	789	2	Genic_Genomic	ENSG00000272086.1	novel	802	1	NA	NA	-95	3	multi-exon	FALSE	canonical	1	5	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGTGGCTAAAGAGTG	32173827	False	NA	11	True	AATAAA	-23	NA	32174375	32175275	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_32174445_32174555
WTC11_00074216	chr5	+	348	3	FSM	ENSG00000205838.14	ENST00000508377.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCCTGTTTAGAGA	34839192	False	NA	NA	False	ACTAAA	-19	NA	34839213	34845713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34839260_34840664_34840740_34845486
WTC11_00074218	chr5	+	2997	12	FSM	ENSG00000168724.17	ENST00000646714.1	2989	12	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	138.964589103819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	34930019	False	NA	NA	False	NA	NA	NA	34930062	34955878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937329_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34950169_34950343_34953925_34954002_34954552
WTC11_00074219	chr5	+	4080	12	NIC	ENSG00000079215.15	novel	4227	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	60.8736667680297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	36603471	True	NA	16	True	AATAAA	-23	NA	36606632	36688334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36630414_36630501_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
WTC11_00074221	chr5	+	802	1	FSM	ENSG00000244073.1	ENST00000477670.1	797	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTCCCTGGGTGACGTG	NA	False	NA	NA	False	NA	NA	NA	37085050	37085852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37085000_37085900
WTC11_00074222	chr5	+	604	4	FSM	ENSG00000248587.8	ENST00000503382.6	604	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.67241208569794	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTGTTTGGAAAAC	37840408	False	NA	9	True	AATAAA	-29	NA	37840437	37874894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37840574_37872351_37872466_37874106_37874267_37874700
WTC11_00074223	chr5	+	279	3	FSM	ENSG00000164318.18	ENST00000508868.5	587	3	127	181	51	-181	multi-exon	FALSE	canonical	2	2	junction_1	1.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCCCCTCTCCATCTGC	NA	False	NA	NA	False	NA	NA	NA	38445646	38451458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_38445703_38448300_38448380_38451314
WTC11_00074224	chr5	+	822	2	FSM	ENSG00000164318.18	ENST00000513131.1	1140	2	318	0	318	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAATCATAATCATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	38462907	38464549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_38463012_38463831
WTC11_00074225	chr5	+	1771	2	FSM	ENSG00000248668.3	ENST00000654321.1	2195	2	217	207	24	-207	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGACTGACTCTTGGC	41870117	False	NA	NA	False	NA	NA	NA	41870143	41872012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41870193_41870290
WTC11_00074226	chr5	+	1304	6	FSM	ENSG00000151876.13	ENST00000509134.1	1284	6	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.95959179422654	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTGCCTCTCATTCC	41925175	True	NA	NA	False	ATTAAA	-14	NA	41925280	41941568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41941191
WTC11_00074227	chr5	+	1047	1	FSM	ENSG00000272144.1	ENST00000607250.1	1047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATAACAGGAAAAGGTA	NA	False	NA	NA	False	TATAAA	-18	NA	43061394	43062441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43061400_43062400
WTC11_00074228	chr5	+	814	3	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	5.5	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGACTCTGTCTCTAA	43067491	False	NA	NA	False	NA	NA	NA	43067512	43080343	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_43067635_43067969_43068218_43079899
WTC11_00074230	chr5	+	4330	21	NIC	ENSG00000112992.18	novel	6483	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	36.9443838763079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAAGTGTAGATTTTCT	43601935	False	NA	14	True	AGTAAA	-14	NA	43602726	43705486	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43602891_43609142_43609347_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
WTC11_00074232	chr5	+	2565	6	NIC	ENSG00000134363.12	novel	2538	6	NA	NA	-294	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	29.0558083694121	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	53480318	False	NA	-16	True	AATAAA	-10	NA	53480331	53487106	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484999_53485228_53485950
WTC11_00074236	chr5	+	553	1	FSM	ENSG00000243592.1	ENST00000467688.1	553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	56136978	56137531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_56137000_56137500
WTC11_00074238	chr5	+	3552	13	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	98	junction_4	311.813902387662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57173801	False	NA	21	True	AATAAA	-17	NA	57173947	57263587	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00074240	chr5	+	2215	12	NNC	ENSG00000062194.16	novel	4683	13	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	339.182000925854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57176036	False	NA	20	True	AATAAA	-23	NA	57176072	57263085	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57176416_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
WTC11_00074242	chr5	+	500	1	FSM	ENSG00000251303.1	ENST00000502277.1	460	1	-15	-25	-15	25	mono-exon	FALSE	NA	NA	NA	NA	NA	1153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTTCAGTGGTCCA	NA	False	NA	NA	False	NA	NA	NA	60630498	60630998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_60630500_60631000
WTC11_00074243	chr5	+	2376	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	-54	-1736	-24	231	multi-exon	FALSE	canonical	0	0	junction_1	389.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGAGATGGTATCTCA	60933842	True	NA	NA	False	NA	NA	NA	60945152	61154762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_60945429_61098991_61099033_61152703
WTC11_00074244	chr5	+	703	2	Genic_Genomic	ENSG00000250461.1	novel	744	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAAAATCAGGATT	NA	False	NA	NA	False	AAAAAG	-34	NA	61375111	61375855	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_61375420_61375460
WTC11_00074246	chr5	+	4882	14	NNC	ENSG00000130449.6	novel	5518	14	NA	NA	136349	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	6	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCCTTTATGGTAT	NA	False	NA	10	True	ATTAAA	-21	NA	61468606	61546172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_61468662_61472680_61473038_61490785_61490935_61494259_61494411_61521262_61521443_61525799_61525977_61526249_61526397_61530051_61530199_61531464_61531726_61535483_61535620_61538813_61538972_61539595_61539760_61541883_61541966_61543454
WTC11_00074255	chr5	+	3106	15	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	2	257	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	40.4788304461198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACATTCCAAGCTGCTT	69089634	True	NA	NA	False	TTTAAA	-28	NA	69094090	69130383	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69094339_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
WTC11_00074258	chr5	+	1627	15	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-5	279	combination_of_known_splicesites	FALSE	canonical	2	13	junction_9	179.415789467382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	69556842	True	NA	NA	False	ATTAAA	-14	NA	69560236	69592525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
WTC11_00074259	chr5	+	622	4	NNC	ENSG00000205572.10	novel	703	3	NA	NA	0	-3361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1001.03690685653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCAGCTGGCTGCCAGC	NA	False	NA	NA	False	AAAAAG	-16	NA	70025355	70038647	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_70025459_70026406_70026516_70032314_70032694_70038616
WTC11_00074262	chr5	+	4317	16	Fusion	ENSG00000269983.1_ENSG00000226259.10	novel	1432	16	NA	NA	3	0	multi-exon	FALSE	canonical	3	18	junction_4	168.106976522557	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	70415354	70450353	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_70415390_70417821_70417920_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
WTC11_00074264	chr5	+	646	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTTGTGGGCCTGGTT	NA	False	NA	NA	False	AATAAA	-34	NA	70908923	70909569	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_70908900_70909600
WTC11_00074265	chr5	+	295	1	FSM	ENSG00000253900.1	ENST00000517835.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAGGCAAATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	71132992	71133287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71133000_71133300
WTC11_00074267	chr5	+	2017	11	NIC	ENSG00000049883.15	novel	11145	10	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	39.6201968697784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATCTTATTTGTTAATG	72318511	True	NA	10	True	AATAAA	-15	NA	72320390	72359229	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_72320510_72321320_72321377_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
WTC11_00074268	chr5	+	4696	25	NIC	ENSG00000083312.19	novel	8489	25	NA	NA	19	1691	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	58.2902072726533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCTCCTCTTTGCAT	72813854	True	NA	13	True	AATAAA	-23	NA	72816713	72910642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_72816753_72848384_72848499_72851237_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
WTC11_00074269	chr5	+	2940	24	NNC	ENSG00000083312.19	novel	3028	25	NA	NA	0	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.5904920413881	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAGAGGTTGAATAAAAC	72836758	True	NA	1	True	AATAAA	-15	NA	72848120	72905541	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72848248_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
WTC11_00074270	chr5	+	2898	24	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	3393	0	-22	5prime_fragment	FALSE	canonical	3	179	junction_1	22.7353475945662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGCCTCATATCATTC	72836821	True	NA	18	True	AATAAA	-32	NA	72848183	72905558	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
WTC11_00074272	chr5	+	457	1	FSM	ENSG00000250071.1	ENST00000511688.1	1107	1	-21	671	-21	-671	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGATTGGCATCCC	NA	False	NA	NA	False	ATTAAA	-23	NA	74798972	74799429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74799000_74799400
WTC11_00074274	chr5	+	1167	1	FSM	ENSG00000272040.1	ENST00000606908.1	1167	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTTCTTATTTGAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	75608816	75609983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75608800_75610000
WTC11_00074275	chr5	+	217	1	FSM	ENSG00000251107.1	ENST00000507570.1	312	1	102	-7	102	7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTTTCATAGACTAG	NA	False	NA	NA	False	AATAGA	-28	NA	76281057	76281274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_76281100_76281300
WTC11_00074277	chr5	+	1450	3	FSM	ENSG00000250802.7	ENST00000512001.6	1691	3	473	-232	0	232	multi-exon	FALSE	canonical	3	5	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAAAAGTCCTTTATCA	77087440	False	NA	NA	False	NA	NA	NA	77087486	77148766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77087620_77118319_77118522_77147651
WTC11_00074278	chr5	+	1503	1	FSM	ENSG00000251400.1	ENST00000510973.1	1533	1	21	9	21	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCAGTAAAGGTGTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	77290288	77291791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77290300_77291800
WTC11_00074279	chr5	+	5212	6	ISM	ENSG00000113231.14	ENST00000505283.1	3474	9	2795	-2733	2795	2672	3prime_fragment	FALSE	canonical	0	0	junction_4	1.95959179422654	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATTGCTGTAATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	77413218	77430928	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_77413310_77418228_77418447_77419766_77419888_77421820_77421989_77425766_77425897_77426444
WTC11_00074281	chr5	+	3254	15	NNC	ENSG00000164329.14	novel	465	5	NA	NA	1542	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	52.34310862385	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGCCTTTTTTTTCT	79614143	False	NA	9	True	AATAAA	-19	NA	79614159	79686646	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79614561_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
WTC11_00074284	chr5	+	1480	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25713	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.8613807855649	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	79784411	True	NA	NA	False	AATAAA	-18	NA	79784465	79800222	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79784685_79788970_79789105_79790969_79791070_79793436_79793611_79799369
WTC11_00074290	chr5	+	517	4	FSM	ENSG00000131730.16	ENST00000515238.5	579	4	0	62	0	-62	multi-exon	FALSE	canonical	1	1	junction_1	8.5764535535124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGTAGGCTCCAGCCT	81233119	True	NA	NA	False	NA	NA	NA	81233325	81254485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81233382_81251112_81251285_81252694_81252894_81254395
WTC11_00074293	chr5	+	453	3	Genic_Genomic	ENSG00000214857.4	novel	209	2	NA	NA	-39316	234	multi-exon	FALSE	canonical	1	1	junction_1	0.5	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGAGGTGCATTCTCT	81853162	False	NA	NA	False	AAGAAA	-32	NA	81853173	81892955	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_81853258_81875421_81875521_81892685
WTC11_00074297	chr5	+	265	4	FSM	ENSG00000250320.7	ENST00000515688.6	703	4	96	342	-16	-342	multi-exon	FALSE	canonical	2	3	junction_1	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGTGGCTCATGC	84383536	True	NA	NA	False	NA	NA	NA	84384555	84417316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_84384600_84387821_84387937_84399584_84399653_84417278
WTC11_00074299	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	5743.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572681	True	NA	24	True	AATAAA	-14	NA	86617972	86620766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618131_86619352_86619443_86620667
WTC11_00074300	chr5	+	741	6	FSM	ENSG00000247828.9	ENST00000688523.1	717	6	-24	0	-1	0	multi-exon	FALSE	canonical	3	22	junction_4	35.2442903177238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88266510	True	NA	11	True	AATAAA	-23	NA	88268893	88287657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
WTC11_00074303	chr5	+	371	1	FSM	ENSG00000255647.3	ENST00000624106.1	667	1	146	150	113	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGAGACTGTCTTCAC	90409946	False	NA	NA	False	NA	NA	NA	90410145	90410516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90410100_90410500
WTC11_00074304	chr5	+	4581	14	FSM	ENSG00000164199.18	ENST00000504142.2	5047	14	0	466	0	-466	multi-exon	TRUE	canonical	2	3	junction_13	2.29225606550021	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAATTATCTTATGTA	90627760	False	NA	NA	False	NA	NA	NA	90627772	90655389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90627777_90628561_90628833_90629209_90629540_90635113_90635291_90637724_90637949_90642635_90642763_90642855_90643042_90643802_90643984_90644705_90644870_90645967_90646092_90647497_90647765_90651603_90651731_90652345_90652564_90653208
WTC11_00074306	chr5	+	10852	54	ISM	ENSG00000164199.18	ENST00000405460.9	19557	90	146601	222	11338	0	3prime_fragment	TRUE	canonical	2	8	junction_6	37.8110194692926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	NA	False	NA	13	True	AATAAA	-13	NA	90705397	91164215	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_90705580_90706230_90706395_90708815_90708910_90710980_90711060_90711183_90711323_90712286_90712429_90716466_90716730_90720047_90720224_90720934_90721060_90724831_90724990_90725085_90725233_90725548_90725657_90728668_90728934_90729641_90729765_90745045_90745266_90745590_90745796_90750550_90750698_90753573_90753830_90754982_90755186_90756453_90756631_90756978_90757162_90759408_90759589_90763304_90763470_90774185_90774304_90776452_90776577_90777904_90778044_90778426_90778610_90778864_90779098_90781429_90781579_90783123_90783326_90783837_90784058_90788070_90788311_90789701_90789852_90790872_90791347_90802738_90802883_90805283_90805459_90807601_90807738_90810232_90811339_90815618_90815737_90823424_90823597_90828943_90829187_90840577_90840986_90848636_90848822_90853283_90853534_90854061_90854202_90855740_90855902_90863756_90863858_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
WTC11_00074307	chr5	+	1353	7	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-93	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	57.0545547894489	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTATCATCCAGCT	90928452	True	NA	11	True	AATAAA	-11	NA	90929146	91164213	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
WTC11_00074308	chr5	+	1538	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	42.0160319256294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTATCATCCAGCTT	90928545	True	NA	12	True	AATAAA	-12	NA	90929239	91164214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
WTC11_00074310	chr5	+	326	1	NIC	ENSG00000248588.2	novel	1205	5	NA	NA	-135	-17559	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCACCTCAAAAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	92826119	92826445	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_92826100_92826400
WTC11_00074312	chr5	+	2788	6	FSM	ENSG00000175449.14	ENST00000458310.1	2788	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.3469899493758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTTTAGAACTTTG	95646381	False	NA	1	True	AATAAA	-8	NA	95646878	95657133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95648075_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
WTC11_00074313	chr5	+	653	4	FSM	ENSG00000164292.13	ENST00000503737.1	653	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.8932812499432	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCTCAAGAATTTGTTT	NA	False	NA	NA	False	TATAAA	-45	NA	95783833	95794332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95783964_95788761_95788859_95793058_95793171_95794018
WTC11_00074314	chr5	+	2733	32	NIC	ENSG00000153113.24	novel	4490	32	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	57.3505749712393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCACCTGTGTACTGA	96660625	True	NA	3	True	AAGAAA	-11	NA	96662253	96772807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
WTC11_00074315	chr5	+	306	1	FSM	ENSG00000251553.1	ENST00000511690.1	1966	1	820	840	820	-840	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGAAAAAGGAGCCGT	NA	False	NA	NA	False	AAAAAG	-20	NA	98680221	98680527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_98680200_98680500
WTC11_00074316	chr5	+	2513	4	FSM	ENSG00000174136.13	ENST00000434027.2	2513	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	60.6684981408529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGAGGGAATTTTA	98768417	True	NA	8	True	AATAAA	-22	NA	98769293	98781185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_98769626_98770352_98770674_98773952_98774207_98779579
WTC11_00074318	chr5	+	3875	26	NNC	ENSG00000145730.21	novel	3990	26	NA	NA	-148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	74.0753562259406	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102754965	True	NA	13	True	AATAAA	-18	NA	102755149	103029716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102987517_102987572_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025133_103025335_103028184_103028239_103028886
WTC11_00074322	chr5	+	15326	30	FSM	ENSG00000145725.20	ENST00000321521.13	15407	30	54	27	0	-27	multi-exon	FALSE	canonical	0	0	junction_12	52.8265057961006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAACTGTTTTCATTTT	103116728	True	NA	-20	True	NA	NA	NA	103120253	103212772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
WTC11_00074323	chr5	+	5553	29	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	43	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	50.6596662613788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTTAAATGGTAAATTT	103116818	True	NA	18	True	ATTAAA	-18	NA	103120343	103203209	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103190841_103190983_103194899_103195026_103201521
WTC11_00074324	chr5	+	3257	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106979053	False	NA	22	True	AATAAA	-22	NA	106979147	106984050	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106979187_106980832
WTC11_00074325	chr5	+	3378	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106979053	False	NA	22	True	AATAAA	-22	NA	106979147	106984050	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106979187_106980711
WTC11_00074326	chr5	+	428	1	FSM	ENSG00000250273.1	ENST00000512850.1	177	1	-255	4	-255	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATTGACTTTTCTAAAA	NA	False	NA	NA	False	AATGAA	-16	NA	107194900	107195328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_107194900_107195300
WTC11_00074327	chr5	+	2912	20	NIC	ENSG00000151422.14	novel	3132	18	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	7.01916647907298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCGACAGTCTTCTACCA	108748667	False	NA	5	True	AATGAA	-15	NA	108748847	109187667	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_108748994_108768092_108768239_108798123_108798390_108832769_108832944_108835707_108835808_108867766_108867951_108871364_108871503_108872092_108872213_108883395_108883519_108897658_108897849_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
WTC11_00074330	chr5	+	2648	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-48	12043	-14	-6810	5prime_fragment	FALSE	canonical	3	150	junction_4	11.7127067751225	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACATTTGGGCAGCTC	110736074	True	NA	NA	False	AATAAA	-42	NA	110738992	110750221	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
WTC11_00074332	chr5	+	290	1	FSM	ENSG00000238363.1	ENST00000458790.1	133	1	-189	32	-189	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTGTAGGAGCTGCA	112150434	False	NA	NA	False	ATTAAA	-36	NA	112161295	112161585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112161300_112161600
WTC11_00074333	chr5	+	1331	1	FSM	ENSG00000278921.2	ENST00000623705.1	1396	1	0	65	0	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGTGCAATATAAATTT	NA	False	NA	NA	False	NA	NA	NA	112419582	112420913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112419600_112420900
WTC11_00074334	chr5	+	9744	16	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	20	-1077	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	8.94923957042658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTACTGAAATTGGTATT	112705140	True	NA	16	True	AATAAA	-18	NA	112707541	112844979	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
WTC11_00074336	chr5	+	846	1	FSM	ENSG00000249791.1	ENST00000514544.1	370	1	-376	-100	-376	100	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTTTGCAGAAAGGGTT	NA	False	NA	NA	False	AAAAAG	-23	NA	115188186	115189032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_115188200_115189000
WTC11_00074337	chr5	+	1203	10	NIC	ENSG00000172869.15	novel	1835	13	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	35.6010126087087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCATGGAAGTTTTT	119068959	True	NA	3	True	AATAAA	-14	NA	119071086	119129315	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119120970_119121140_119129210
WTC11_00074342	chr5	+	3937	8	FSM	ENSG00000133835.18	ENST00000683335.1	3937	8	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_3	100.144181772368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATACCTTTGTTTTT	119512081	False	NA	-2	True	AATAAA	-3	NA	119512141	119542318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
WTC11_00074343	chr5	+	1247	2	FSM	ENSG00000248927.1	ENST00000511422.1	1114	2	242	-375	242	375	multi-exon	TRUE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTGTATTGTTTGTA	NA	False	NA	NA	False	AATAAA	-3	NA	120781459	120791153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_120781507_120789953
WTC11_00074344	chr5	+	4032	9	NNC	ENSG00000151304.6	novel	2855	8	NA	NA	-6	3803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.3573840505612	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTCCTGTGTTCCTGTT	121958426	True	NA	11	True	AATAAA	-20	NA	121961968	122032436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941_122028790_122031421
WTC11_00074345	chr5	+	3630	12	NIC	ENSG00000064692.20	novel	3126	13	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.5670294537849	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATAAGCTTGGGGCACC	NA	False	NA	8	True	AATAAA	-16	NA	122311587	122464054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_122311783_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122452924_122452996_122463490
WTC11_00074346	chr5	+	3488	12	NIC	ENSG00000064692.20	novel	3126	13	NA	NA	6	-11	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	16.4211111853609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAACAGCCACCTATAAG	122311642	False	NA	-3	True	AATAAA	-5	NA	122311774	122464043	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_122311839_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122452924_122452996_122463490
WTC11_00074349	chr5	+	1563	7	FSM	ENSG00000064652.11	ENST00000513881.5	1563	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	31.3882497476719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCCCGCTAGTGGCA	122845392	False	NA	NA	False	AAAAAG	-36	NA	122845517	123008610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002081_123007681
WTC11_00074351	chr5	+	4567	14	NNC	ENSG00000151292.17	novel	4635	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	82.0950524278784	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGGAAATAGCATCATT	123508549	True	NA	NA	False	ATTAAA	-17	NA	123512259	123617045	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_123512571_123532568_123532654_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
WTC11_00074355	chr5	+	2410	11	NNC	ENSG00000113368.12	novel	2890	11	NA	NA	3	28	at_least_one_novel_splicesite	TRUE	canonical	2	14	junction_3	102.051947556134	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCTTGGTGTAATTTGAA	126764419	True	NA	NA	False	AATAAA	-8	NA	126777191	126836599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_126777868_126804775_126804933_126805570_126805697_126810182_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
WTC11_00074356	chr5	+	548	4	FSM	ENSG00000197536.11	ENST00000378953.8	942	4	347	47	2	-13	multi-exon	FALSE	canonical	1	1	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACTTATGTACATTTT	132410961	False	NA	NA	False	ATTAAA	-9	NA	132410982	132475997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132411042_132419822_132419941_132449649_132449690_132475666
WTC11_00074357	chr5	+	4373	25	FSM	ENSG00000113522.14	ENST00000533482.5	4373	25	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_3	32.5108689090621	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTAGGATTTTGG	132551716	True	NA	9	True	AATATA	-15	NA	132556937	132642476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132557454_132559283_132559368_132575776_132575864_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
WTC11_00074358	chr5	+	490	2	FSM	ENSG00000205089.8	ENST00000492179.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCTATGAATACTGTACA	132749293	False	NA	NA	False	AATACA	-24	NA	132749369	132751293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132749423_132750856
WTC11_00074359	chr5	+	3258	1	FSM	ENSG00000198944.6	ENST00000378693.4	3485	1	41	186	41	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAATGCTCTGCTTTTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	132813342	132816600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132813300_132816600
WTC11_00074360	chr5	+	228	1	FSM	ENSG00000279691.1	ENST00000623366.1	203	1	-66	41	-66	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACGGATAGGAATTTAAT	133052684	False	NA	-27	True	NA	NA	NA	133052702	133052930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_133052700_133052900
WTC11_00074361	chr5	+	1498	9	FSM	ENSG00000043143.22	ENST00000431355.2	1552	9	54	0	54	0	multi-exon	FALSE	canonical	2	4	junction_1	26.4185067708226	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCCATGCCGCCTG	134524252	False	NA	NA	False	NA	NA	NA	134524365	134566580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115
WTC11_00074362	chr5	+	572	1	Genic_Genomic	ENSG00000043143.22	novel	NA	NA	NA	NA	41	-9928	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGAAATGTACCG	134526262	False	NA	NA	False	NA	NA	NA	134526290	134526862	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_134526300_134526900
WTC11_00074363	chr5	+	3632	2	FSM	ENSG00000164615.6	ENST00000678434.1	3614	2	-18	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATTCCAGCTACTC	134734054	True	NA	NA	False	AATACA	-27	NA	134738494	134744396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134741062
WTC11_00074364	chr5	+	2027	4	FSM	ENSG00000164615.6	ENST00000678771.1	2027	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.5921217221053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTGCACCTGGCCTT	134734054	True	NA	NA	False	NA	NA	NA	134738494	134751963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134741065_134741524_134743986_134744053_134750758
WTC11_00074365	chr5	+	1006	4	FSM	ENSG00000113621.15	ENST00000511070.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.2989033797144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTTAAGGAAACCCTTG	134871138	True	NA	NA	False	NA	NA	NA	134874370	134900039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134874531_134893491_134893656_134896293_134896425_134899488
WTC11_00074366	chr5	+	393	1	FSM	ENSG00000270021.1	ENST00000602502.1	2017	1	1043	581	1043	-581	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGAAGGGGAAAGTAACA	NA	False	NA	NA	False	NA	NA	NA	135400322	135400715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_135400300_135400700
WTC11_00074368	chr5	+	1518	6	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	15	9904	13	0	5prime_fragment	FALSE	canonical	3	98	junction_1	52.3243729059413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	136129905	True	NA	7	True	AATAAA	-18	NA	136132859	136172829	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433
WTC11_00074369	chr5	+	774	3	FSM	ENSG00000249803.6	ENST00000660537.1	781	3	0	7	0	-7	multi-exon	FALSE	canonical	2	2	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTTCTATGTGGAT	136465942	True	NA	20	True	AATAAA	-32	NA	136466700	136521138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136466886_136520174_136520275_136520649
WTC11_00074371	chr5	+	4487	8	NNC	ENSG00000120709.11	novel	551	4	NA	NA	4	0	intron_retention	FALSE	canonical	3	4	junction_4	46.4617463893795	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138331384	True	NA	28	True	AATAAA	-33	NA	138332108	138349729	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873_138336986_138341183_138341414_138341808_138341867_138344824_138345610_138346701
WTC11_00074372	chr5	+	4271	6	NNC	ENSG00000120709.11	novel	551	4	NA	NA	4	0	intron_retention	FALSE	canonical	1	3	junction_2	49.4829263483881	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138331384	True	NA	28	True	AATAAA	-33	NA	138332108	138349729	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_138332186_138333432_138333529_138341183_138341414_138341808_138341867_138344827_138345610_138346701
WTC11_00074374	chr5	+	584	5	FSM	ENSG00000132563.17	ENST00000507511.5	560	5	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.448659179164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGGACACCATCGAGG	138437005	True	NA	NA	False	NA	NA	NA	138439086	138445349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138439241_138441015_138441089_138444414_138444536_138444753_138444868_138445227
WTC11_00074375	chr5	+	2013	7	NIC	ENSG00000132563.17	novel	2131	8	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	109.680976776589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACCTCATTTATTTTGG	138437006	True	NA	4	True	AATAAA	-9	NA	138439087	138446955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_138439241_138441015_138441089_138444414_138444536_138444753_138444868_138445227_138445376_138445467_138445599_138445682
WTC11_00074377	chr5	+	3851	19	FSM	ENSG00000044115.21	ENST00000627109.2	3831	19	-20	0	-20	0	multi-exon	TRUE	canonical	1	2	junction_18	503.262823121083	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGAGCCCAAAGTCGT	138732271	True	NA	27	True	AATAAA	-21	NA	138753397	138935033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138932887_138932959_138933801
WTC11_00074379	chr5	+	2929	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	320	0	-31	0	multi-exon	FALSE	canonical	3	13	junction_2	1024.41384917181	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	139263634	True	NA	NA	False	NA	NA	NA	139274071	139329404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
WTC11_00074384	chr5	+	1166	6	NIC	ENSG00000131508.16	novel	2530	7	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	928.956532890533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGGGTGGTGGGTATG	139538806	True	NA	-95	True	ACTAAA	-41	NA	139561346	139627110	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_139561816_139600371_139600436_139614696_139614775_139614860_139614967_139623367_139623462_139626755
WTC11_00074386	chr5	+	7578	1	FSM	ENSG00000185129.8	ENST00000331327.5	11511	1	-4	3937	-4	-3937	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACTGGGCAGTTTTTTT	140114073	False	NA	NA	False	NA	NA	NA	140114104	140121682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140114100_140121700
WTC11_00074387	chr5	+	1646	1	FSM	ENSG00000182700.5	ENST00000333305.5	3456	1	1140	670	1140	-670	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTTGTACAGATTTAA	NA	False	NA	-56	True	AATATA	-12	NA	140127076	140128722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140127100_140128700
WTC11_00074388	chr5	+	8321	35	NIC	ENSG00000131503.21	novel	8195	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_11	106.696757668103	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAAGTGGGGTGTGAT	140387783	True	NA	11	True	AATAAA	-13	NA	140401813	140539848	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
WTC11_00074389	chr5	+	2096	11	NIC	ENSG00000131503.21	novel	2135	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	90.854884293581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387820	True	NA	13	True	AATAAA	-22	NA	140401850	140472477	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140402274_140436103_140436258_140438502_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
WTC11_00074391	chr5	+	3234	8	FSM	ENSG00000131503.21	ENST00000432301.5	3234	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	52.2587752615456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	NA	False	NA	12	True	AATAAA	-14	NA	140526152	140539849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140537388_140537590_140538085_140538262_140538918_140539084_140539358
WTC11_00074394	chr5	+	3971	1	FSM	ENSG00000204970.10	ENST00000378133.4	2726	1	37	-1282	33	1282	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAATCAAGGAAGATTT	140786076	True	NA	NA	False	NA	NA	NA	140786172	140790143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140786200_140790100
WTC11_00074395	chr5	+	3063	2	FSM	ENSG00000204969.7	ENST00000520672.2	3056	2	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGGTTTATTTATT	140794723	True	NA	NA	False	ATTAAA	-19	NA	140794851	140805621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140797353_140805059
WTC11_00074396	chr5	+	2961	1	FSM	ENSG00000204962.6	ENST00000378123.4	2616	1	-493	148	-493	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGGATCAGTTGATG	140840608	False	NA	NA	False	NA	NA	NA	140840693	140843654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140840700_140843700
WTC11_00074397	chr5	+	6028	4	FSM	ENSG00000248383.5	ENST00000253807.3	5896	4	-135	3	-135	-3	multi-exon	FALSE	canonical	1	4	junction_1	83.5822947758675	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	140926163	141012344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140929326_140978948_140979008_140982474_140982564_141009626
WTC11_00074398	chr5	+	2169	1	FSM	ENSG00000272108.1	ENST00000606030.1	2086	1	-85	2	-85	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAGTGGTACCATTCT	NA	False	NA	1	True	AATAAA	-12	NA	141118594	141120763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141118600_141120800
WTC11_00074399	chr5	+	3637	1	FSM	ENSG00000113209.9	ENST00000231134.8	3410	1	3	-230	3	230	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGGGTATATGCCT	141134281	True	NA	NA	False	TATAAA	-39	NA	141135208	141138845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141135200_141138800
WTC11_00074400	chr5	+	6200	1	FSM	ENSG00000120322.4	ENST00000239444.4	2750	1	25	-3475	25	3475	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTACTCGCTGCTGCC	141177769	False	NA	NA	False	NA	NA	NA	141177814	141184014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141177800_141184000
WTC11_00074401	chr5	+	2857	1	FSM	ENSG00000177839.7	ENST00000316105.7	4381	1	-233	1757	-199	976	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAAAGAAGGTACTATTT	141186682	False	NA	NA	False	AATATA	-33	NA	141186927	141189784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141186900_141189800
WTC11_00074402	chr5	+	3165	1	FSM	ENSG00000272070.2	ENST00000606901.1	3148	1	7	-24	7	18	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCTTTCCTCATTTTT	141326052	True	NA	30	True	ACTAAA	-41	NA	141326216	141329381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141326200_141329400
WTC11_00074403	chr5	+	320	1	FSM	ENSG00000081853.15	ENST00000528330.2	4543	1	76	4147	76	-4147	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGTCCGCATCGTCTCC	141338816	False	NA	NA	False	NA	NA	NA	141338835	141339155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141338800_141339200
WTC11_00074404	chr5	+	2102	1	FSM	ENSG00000262209.3	ENST00000618934.1	2445	1	415	-72	415	72	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGATTTTCTGGTGTA	141370748	False	NA	NA	False	ATTAAA	-20	NA	141370809	141372911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141370800_141372900
WTC11_00074405	chr5	+	2310	5	FSM	ENSG00000164620.9	ENST00000520674.5	2329	5	19	0	19	0	multi-exon	TRUE	canonical	1	3	junction_2	108.428259692757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	141635541	True	NA	11	True	AATAAA	-16	NA	141636968	141641063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141638410_141638794_141638861_141639919_141640296_141640411_141640446_141640670
WTC11_00074406	chr5	+	1927	9	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	82.6860591333267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGCTGCTTCGCATCCT	141635573	True	NA	9	True	AATAAA	-14	NA	141637000	141641061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640003_141640176_141640296_141640411_141640446_141640670
WTC11_00074407	chr5	+	8226	12	NNC	ENSG00000081791.9	novel	4907	12	NA	NA	-63	812	intron_retention	FALSE	canonical	2	4	junction_10	64.9522392872621	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCATAGAAAAAATGCATA	141917813	True	NA	NA	False	NA	NA	NA	141923791	141942859	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141937015_141937197_141937358_141938520
WTC11_00074408	chr5	+	2281	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	72.2951707652477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCATCACTCTTGCCCT	141917876	True	NA	5	True	AATAAA	-14	NA	141923854	141940145	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939553
WTC11_00074409	chr5	+	2325	14	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	75.7070811098771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCATCACTCTTGCCCT	141917876	True	NA	5	True	AATAAA	-14	NA	141923854	141940145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938855_141938905_141939505
WTC11_00074412	chr5	+	643	5	FSM	ENSG00000013561.18	ENST00000506822.5	667	5	24	0	24	0	multi-exon	FALSE	canonical	1	1	junction_1	43.3553629900616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTAGCATACTTGAATA	NA	False	NA	NA	False	NA	NA	NA	141958360	141978394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141958426_141970703_141970878_141973582_141973743_141974803_141974956_141978302
WTC11_00074414	chr5	+	2784	6	Fusion	ENSG00000236714.3_ENSG00000231185.8	novel	1312	5	NA	NA	14299	0	multi-exon	FALSE	canonical	0	0	junction_1	15.2656477098091	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCTATAAATTTT	NA	False	NA	11	True	CATAAA	-19	NA	142367841	142760998	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_142367887_142703380_142703491_142745207_142745719_142756733_142756831_142757826_142757935_142759085
WTC11_00074415	chr5	+	1790	1	FSM	ENSG00000261757.1	ENST00000566527.1	1640	1	-250	100	-250	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTATTTCTTTATGGG	142701901	False	NA	NA	False	NA	NA	NA	142703531	142705321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142703500_142705300
WTC11_00074419	chr5	+	293	3	FSM	ENSG00000145819.18	ENST00000470032.1	293	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAATGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143014079	143041714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_143014117_143037195_143037262_143041524
WTC11_00074421	chr5	+	730	7	FSM	ENSG00000169302.16	ENST00000626951.2	798	7	-8	76	-8	-76	multi-exon	FALSE	canonical	1	1	junction_6	1.4142135623731	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATTTTGCAAAACTAC	147234938	True	NA	NA	False	NA	NA	NA	147235097	147348754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147348694
WTC11_00074422	chr5	+	779	5	NNC	ENSG00000280780.3	novel	2074	5	NA	NA	0	-17175	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	79.4807366598977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTATGTGCTAGACAC	147555009	True	NA	-1	True	NA	NA	NA	147559993	147643639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147643367
WTC11_00074423	chr5	+	437	4	NNC	ENSG00000287630.1	novel	2375	2	NA	NA	-4147	14822	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	8.5764535535124	123	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGACTTTTTTGTA	147721228	True	NA	NA	False	AATAAA	-15	NA	147721403	147743286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147721531_147722232_147722310_147725441_147725581_147743192
WTC11_00074424	chr5	+	8248	2	Antisense	novelGene_ENSG00000288774.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	37	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGATTTCAGTAATAATAA	NA	False	NA	NA	False	NA	NA	NA	147857217	147874673	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_147864767_147873974
WTC11_00074425	chr5	+	622	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTAGCCTTTCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	147866246	147866868	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_147866200_147866900
WTC11_00074426	chr5	+	502	4	NNC	ENSG00000164265.9	novel	516	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	552.583226511828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147869587	True	NA	NA	False	AATAAA	-13	NA	147870684	147882191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870755_147878794_147878859_147881445_147881649_147882026
WTC11_00074427	chr5	+	781	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	546.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147871625	False	NA	NA	False	AATAAA	-12	NA	147871704	147882190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147872119_147881445_147881649_147882026
WTC11_00074428	chr5	+	762	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	2666	-1	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_1	569.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCAGTCGTCCTATTT	147874557	False	NA	NA	False	AATAAA	-11	NA	147874683	147882189	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147875080_147881445_147881649_147882026
WTC11_00074429	chr5	+	4429	39	NNC	ENSG00000133710.16	novel	3656	34	NA	NA	-79023	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	12.7654365844312	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGATTTCTTTGTCAC	147946194	True	NA	17	True	AATAAA	-23	NA	147946659	148137289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147946879_147948791_147948906_147963709_147963823_148011606_148011725_148020749_148020850_148063862_148064100_148065346_148065373_148070322_148070451_148072147_148072221_148086404_148086533_148088541_148088606_148089493_148089622_148091164_148091229_148094353_148094482_148095817_148095906_148097866_148097995_148099233_148099316_148100453_148100582_148101354_148101437_148101780_148101909_148104951_148105001_148107036_148107165_148108752_148108838_148111767_148111896_148112867_148112935_148114361_148114490_148116369_148116467_148118436_148118565_148118985_148119059_148120008_148120137_148120294_148120392_148123832_148123961_148124764_148124838_148125523_148125614_148125722_148125851_148126982_148127080_148131258_148131390_148133796_148133888_148136982
WTC11_00074430	chr5	+	2915	28	FSM	ENSG00000133710.16	ENST00000398454.5	2915	28	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.0685605003572	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAAAATTGATTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	148063971	148124940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148064100_148065346_148065373_148070322_148070451_148072147_148072221_148086404_148086533_148088541_148088606_148089493_148089622_148091164_148091229_148094353_148094482_148095817_148095906_148097866_148097995_148099233_148099316_148100453_148100582_148101354_148101437_148101780_148101909_148104951_148105001_148107036_148107165_148108752_148108838_148111767_148111896_148112867_148112935_148114361_148114490_148116369_148116467_148118436_148118565_148118985_148119059_148120008_148120137_148120294_148120392_148123832_148123961_148124764
WTC11_00074432	chr5	+	560	2	FSM	ENSG00000155846.17	ENST00000492495.1	572	2	12	0	12	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGGTGTTGACGTTC	149845642	False	NA	NA	False	NA	NA	NA	149845654	149847757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149845915_149847457
WTC11_00074434	chr5	+	442	1	FSM	ENSG00000070614.15	ENST00000624156.1	486	1	-215	259	-215	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGGGAAAGTTTTGC	150550180	False	NA	NA	False	NA	NA	NA	150550198	150550640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150550200_150550600
WTC11_00074435	chr5	+	3925	6	NNC	ENSG00000164591.14	novel	665	3	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.777300099044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	150668960	False	NA	NA	False	AATAAA	-16	NA	150668971	150679363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150669177_150669946_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
WTC11_00074436	chr5	+	493	3	FSM	ENSG00000164591.14	ENST00000524256.1	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGATGGCCGAAGTCACA	150671194	False	NA	NA	False	NA	NA	NA	150671420	150672448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150671651_150671754_150671909_150672339
WTC11_00074437	chr5	+	576	2	FSM	ENSG00000164591.14	ENST00000523553.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGATGAAGAGGCTGC	150671692	False	NA	NA	False	NA	NA	NA	150671760	150672767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150671909_150672339
WTC11_00074440	chr5	+	3754	11	FSM	ENSG00000164574.16	ENST00000377661.2	3778	11	24	0	24	0	multi-exon	FALSE	canonical	0	0	junction_4	26.8828941894283	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATTTCCTAGTGCCTTG	154188651	False	NA	29	True	AATATA	-20	NA	154190797	154419031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154191026_154294815_154294919_154297940_154298080_154329571_154329739_154380447_154380632_154386312_154386431_154404103_154404212_154409540_154409763_154412888_154413006_154415782_154415933_154416813
WTC11_00074441	chr5	+	3029	15	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	147	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	153.308212967425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAAAGAAGGGAACAACA	154754264	False	NA	NA	False	AATAAA	-18	NA	154755523	154805109	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154804860
WTC11_00074443	chr5	+	1477	7	FSM	ENSG00000082515.18	ENST00000522038.5	3162	7	-7	1692	0	748	multi-exon	FALSE	canonical	3	8	junction_2	711.257962267481	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTCTTCATTAAGAAGAAG	154931708	True	NA	NA	False	NA	NA	NA	154941094	154967719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154941139_154941216_154941266_154950802_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
WTC11_00074451	chr5	+	759	2	FSM	ENSG00000113328.19	ENST00000509425.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTTAGTACTAAGGGA	163443756	True	NA	-36	True	NA	NA	NA	163443795	163444965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163443926_163444336
WTC11_00074456	chr5	+	1118	4	FSM	ENSG00000234511.10	ENST00000524171.5	1202	4	76	8	3	-8	multi-exon	FALSE	canonical	1	1	junction_3	7.58653778449403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCCTCTGAGTAA	170232883	True	NA	NA	False	AATAAA	-25	NA	170232987	170252567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170233008_170234114_170234199_170234976_170235071_170251647
WTC11_00074458	chr5	+	4732	30	FSM	ENSG00000204764.14	ENST00000522066.5	4739	30	0	7	0	-7	multi-exon	TRUE	canonical	0	0	junction_16	19.1840698876805	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATTTCTCAGACTCA	170859226	True	NA	NA	False	AGTAAA	-19	NA	170862017	171300008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_170983064_170983246_171028871_171028990_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
WTC11_00074470	chr5	+	1128	4	NIC	ENSG00000165671.22	novel	12136	24	NA	NA	-262	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.2908024831131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTGCTGTTCTTTAAA	177132673	False	NA	NA	False	ATTAAA	-17	NA	177132762	177137404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_177133155_177135086_177135201_177135940_177136031_177136872
WTC11_00074477	chr5	+	1634	3	NNC	ENSG00000131188.12	novel	1345	3	NA	NA	6	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCTTCTCCGGTGGTTG	177446465	True	NA	NA	False	NA	NA	NA	177446819	177456416	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_177446961_177454828_177455495_177455589
WTC11_00074478	chr5	+	1919	2	ISM	ENSG00000131188.12	ENST00000510492.1	1285	3	5500	287	5500	149	3prime_fragment	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGCAGGCCGACCGT	177453479	False	NA	NA	False	NA	NA	NA	177453833	177455981	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_177455495_177455723
WTC11_00074480	chr5	+	552	4	FSM	ENSG00000027847.14	ENST00000510761.1	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.6076320585184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTGCCATGCACGAC	177598220	True	NA	NA	False	NA	NA	NA	177600205	177607357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177600261_177601425_177601504_177604178_177604542_177607301
WTC11_00074485	chr5	+	6910	5	NNC	ENSG00000145911.6	novel	5985	5	NA	NA	22	953	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	102.874924058295	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTACTGTCAATTTTA	178107372	True	NA	22	True	AATAAA	-25	NA	178113553	178127034	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_178113772_178119559_178119914_178120177_178120700_178121097_178121353_178121473
WTC11_00074486	chr5	+	4250	6	FSM	ENSG00000145916.19	ENST00000513162.5	4250	6	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	18.0930926046378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAACTCAATCAGACTT	178141658	False	NA	21	True	TTTAAA	-24	NA	178141671	178149991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178142993_178143626_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
WTC11_00074487	chr5	+	4097	7	NIC	ENSG00000178338.11	novel	2794	5	NA	NA	-7	1176	combination_of_known_splicesites	FALSE	canonical	3	21	junction_6	17.8582380616529	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCAATAAAATAATTATG	NA	False	NA	23	True	AATAAA	-20	NA	178859945	178889298	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708_178884519_178885613_178885734_178887620
WTC11_00074491	chr5	+	690	2	FSM	ENSG00000234284.7	ENST00000521285.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGCTGGAGAACTACAG	179024425	False	NA	NA	False	NA	NA	NA	179024437	179027562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179025038_179027472
WTC11_00074494	chr5	+	2694	18	NIC	ENSG00000176783.15	novel	2454	18	NA	NA	3	0	intron_retention	FALSE	canonical	2	21	junction_8	69.7899964079088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTATCATTGGCCCTG	179559077	True	NA	-38	True	NA	NA	NA	179559743	179609970	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179586330_179586476_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
WTC11_00074496	chr5	+	325	2	FSM	ENSG00000250999.2	ENST00000503428.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	179658195	False	NA	NA	False	AATAGA	-18	NA	179658264	179664430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179658482_179664322
WTC11_00074503	chr5	+	823	3	FSM	ENSG00000248275.3	ENST00000433265.4	849	3	22	4	5	-4	multi-exon	FALSE	canonical	3	21	junction_2	55	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGCGTGTGATGGTG	181260406	True	NA	NA	False	AATAAA	-22	NA	181261226	181264577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181261385_181263627_181263767_181264051
WTC11_00074504	chr5	+	1273	7	Fusion	ENSG00000248103.1_ENSG00000274525.1	novel	246	3	NA	NA	-5	5739	intron_retention	FALSE	canonical	3	10	junction_5	52.6795870227633	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCCCAGACATCACCTT	181277821	True	NA	NA	False	NA	NA	NA	181281369	181301311	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_181281613_181283156_181283243_181283341_181283504_181291672_181291739_181293894_181293952_181295046_181295574_181301179
WTC11_00074507	chr5	-	482	2	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCTCTGACGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	260827	259930	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_260041_260455
WTC11_00074508	chr5	-	235	2	FSM	ENSG00000188818.13	ENST00000503880.1	493	2	0	258	0	-258	multi-exon	FALSE	canonical	3	8	junction_1	0	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGCCGCCGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	847623	843599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_843725_847513
WTC11_00074512	chr5	-	8018	8	NNC	ENSG00000185986.13	novel	2585	9	NA	NA	0	35717	intron_retention	FALSE	non_canonical	0	0	junction_1	47.4182432816566	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGTTACCAGAG	-1591245	True	NA	NA	False	AAAAAG	-15	NA	1594476	1531777	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1531804_1567481_1568999_1574181_1574296_1576178_1576310_1579276_1585134_1589246_1589366_1593112_1593285_1594394
WTC11_00074513	chr5	-	2585	9	FSM	ENSG00000185986.13	ENST00000652578.1	2585	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	44.3337836756575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTCTATACTTTG	-1591245	True	NA	-15	True	NA	NA	NA	1594476	1567494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1568999_1572181_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
WTC11_00074514	chr5	-	1030	5	FSM	ENSG00000188002.11	ENST00000507290.5	1033	5	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_3	52.4708252269773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-1632239	True	NA	4	True	ATTAAA	-20	NA	1633978	1598919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632643_1632907_1633807
WTC11_00074516	chr5	-	1420	4	FSM	ENSG00000188002.11	ENST00000686018.1	1462	4	42	0	1	0	multi-exon	FALSE	canonical	3	38	junction_2	37.249906785864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	-1632203	True	NA	-5	True	TTTAAA	-41	NA	1633942	1628515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1632643_1632752_1632844_1632907_1633807
WTC11_00074517	chr5	-	1501	4	FSM	ENSG00000188002.11	ENST00000687772.1	1687	4	16	170	1	14	multi-exon	FALSE	canonical	2	14	junction_1	52.6012251652838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTTCGGGTGTTTGGG	-1632203	True	NA	-8	True	AATAAA	-26	NA	1633942	1628685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1630408_1630567_1632643_1632907_1633807
WTC11_00074518	chr5	-	925	2	FSM	ENSG00000133398.4	ENST00000503112.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTAATATTTTTCTTT	-6368493	False	NA	-9	True	ATTAAA	-14	NA	6374811	6372164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6372602_6374323
WTC11_00074520	chr5	-	218	2	FSM	ENSG00000250668.2	ENST00000666886.1	1438	2	649	571	-45	-571	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAATTTAAAGAGATGC	NA	False	NA	NA	False	NA	NA	NA	7348022	7347600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7347769_7347972
WTC11_00074521	chr5	-	982	4	ISM	ENSG00000124279.12	ENST00000511261.5	1551	7	4932	-238	58	0	3prime_fragment	FALSE	canonical	3	128	junction_3	15.9234278833282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7861957	False	NA	-9	True	AATAAA	-16	NA	7863238	7859158	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822
WTC11_00074522	chr5	-	2278	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_6	51.5032361442787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867761	True	NA	-9	True	AATAAA	-16	NA	7869042	7859158	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868033_7868978
WTC11_00074523	chr5	-	557	1	FSM	ENSG00000272049.1	ENST00000607691.1	587	1	1	29	1	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGCAAAATAAACATTCTA	NA	False	NA	NA	False	NA	NA	NA	8445534	8444977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_8445000_8445500
WTC11_00074524	chr5	-	2208	1	FSM	ENSG00000272417.1	ENST00000607861.1	441	1	-1788	21	-1788	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGATCTCAGGACTTTA	NA	False	NA	NA	False	AATAAA	-4	NA	10205828	10203620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10203600_10205800
WTC11_00074525	chr5	-	657	4	FSM	ENSG00000154122.14	ENST00000502585.1	830	4	173	0	173	0	multi-exon	FALSE	canonical	3	43	junction_1	5.8878405775519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGAGGCCTTGATT	NA	False	NA	NA	False	NA	NA	NA	14716915	14711087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14711311_14712873_14712974_14713543_14713668_14716705
WTC11_00074527	chr5	-	6071	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-100	-1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.194010415709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGCTGTAGCCCTA	-16738348	False	NA	NA	False	AGTAAA	-9	NA	16738514	16663306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663359_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
WTC11_00074528	chr5	-	6070	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-100	-1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.194010415709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGCTGTAGCCCTA	-16738348	False	NA	NA	False	AGTAAA	-9	NA	16738514	16663306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663360_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
WTC11_00074529	chr5	-	8072	42	NNC	ENSG00000145555.15	novel	11442	41	NA	NA	0	-1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.789534914273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGCTGTAGCCCTA	-16934055	True	NA	NA	False	AGTAAA	-9	NA	16936259	16663306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663359_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
WTC11_00074530	chr5	-	485	1	FSM	ENSG00000243538.1	ENST00000470806.1	348	1	-66	-71	-66	71	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTAGCCGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	16902707	16902222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16902200_16902700
WTC11_00074531	chr5	-	201	2	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	83	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGAGGCGATCCAGCA	-18540972	False	NA	NA	False	NA	NA	NA	18541009	18536174	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18536276_18540909
WTC11_00074532	chr5	-	921	1	FSM	ENSG00000214132.4	ENST00000502634.1	1404	1	455	28	455	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTACTGGAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	20304993	20304072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_20304100_20305000
WTC11_00074533	chr5	-	1219	4	NNC	ENSG00000248605.5	novel	369	3	NA	NA	0	373	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	37.7211994624891	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGAGATGATTGAC	-25445292	True	NA	-20	True	AATAAA	-14	NA	25445907	25413065	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25415574_25415801_25422729_25422856_25445819
WTC11_00074534	chr5	-	409	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	0	-85	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAAAGTTTATTTAC	-25445292	True	NA	NA	False	CATAAA	-11	NA	25445907	25413523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_25413845_25445819
WTC11_00074535	chr5	-	10068	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-9666	at_least_one_novel_splicesite	FALSE	canonical	3	148	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTCTTGCTAAAATTT	-25445310	True	NA	93	True	CATAAA	-4	NA	25445925	25425311	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25435274_25445819
WTC11_00074536	chr5	-	10026	1	FSM	ENSG00000279531.1	ENST00000623500.1	188	1	-9838	0	-9838	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCTTTCTTTGTCTAT	-25435426	False	NA	-7	True	AATAAA	-23	NA	25435437	25425411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_25425400_25435400
WTC11_00074538	chr5	-	3757	31	NNC	ENSG00000113360.17	novel	5305	35	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_29	80.1485842392463	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGGAATAGATCCTG	-31516882	False	9536	NA	False	AATAAA	-16	NA	31526418	31401150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078
WTC11_00074539	chr5	-	6205	10	ISM	ENSG00000151388.11	ENST00000504830.6	8572	24	276008	0	8369	0	3prime_fragment	FALSE	canonical	1	1	junction_6	2.48451997499977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTTTCTGTGTGATTC	NA	False	NA	-2	True	AATAAA	-13	NA	33615982	33523534	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_33527367_33534832_33534993_33546058_33546203_33549206_33549384_33561026_33561180_33576053_33577161_33588598_33588810_33595933_33596061_33614237_33614377_33615827
WTC11_00074540	chr5	-	1195	6	FSM	ENSG00000242110.8	ENST00000382085.7	1195	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	31.922405924366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGGACCCCCCAGCA	-34007004	True	NA	-19	True	AATAAA	-1	NA	34008028	33988306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33988362_33989110_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
WTC11_00074541	chr5	-	1255	7	NIC	ENSG00000215158.9	novel	5001	6	NA	NA	-15	-4055	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	7.68114574786861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCATGTATATCT	-34244052	False	759	NA	False	AATAAA	-25	NA	34244811	34168752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_34169154_34175444_34175538_34175821_34175958_34179012_34179098_34182679_34182868_34218294_34218451_34244615
WTC11_00074542	chr5	-	1129	6	NNC	ENSG00000113456.19	novel	1153	5	NA	NA	0	8194	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	127.337975482572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAACCTGTGTCACT	-34912765	True	NA	-7	True	ATTAAA	-20	NA	34915548	34897065	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_34897382_34908893_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
WTC11_00074545	chr5	-	2826	18	NNC	ENSG00000164187.7	novel	8116	18	NA	NA	-23	4961	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	7.29601493351231	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTCGTGTCTTAAAAC	-36151009	True	NA	NA	False	AAGAAA	-39	NA	36151910	36103560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151714
WTC11_00074547	chr5	-	3317	7	FSM	ENSG00000152620.13	ENST00000404560.7	3317	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	13.2884661768518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTTTTTAACATTTC	NA	False	NA	-22	True	AATAAA	-16	NA	36218257	36192884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747
WTC11_00074549	chr5	-	2491	2	FSM	ENSG00000285967.1	ENST00000647750.1	2589	2	0	98	0	-98	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGCACATATCTGTGAA	-36876365	True	NA	NA	False	AATGAA	-26	NA	36876657	36864522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36866027_36875670
WTC11_00074550	chr5	-	380	2	FSM	ENSG00000197603.16	ENST00000505431.1	447	2	0	67	0	-42	multi-exon	TRUE	canonical	3	6	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAAAAAGTTTATACAT	NA	False	NA	NA	False	TATAAA	-10	NA	37206382	37205260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37205455_37206196
WTC11_00074552	chr5	-	3078	5	NIC	ENSG00000145592.14	novel	7573	4	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	3	73	junction_1	5073.52295624056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGCAAATTTGTCT	-40714333	True	NA	NA	False	AATAAA	-23	NA	40835212	40825256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_40827952_40832441_40832574_40834180_40834266_40834470_40834607_40835182
WTC11_00074554	chr5	-	711	1	Genic_Genomic	ENSG00000177738.5	novel	NA	NA	NA	NA	-67	-2114	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCCGCCGCCACCGGAAA	NA	False	NA	NA	False	NA	NA	NA	43018878	43018167	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_43018200_43018900
WTC11_00074555	chr5	-	652	1	FSM	ENSG00000177721.5	ENST00000616064.2	949	1	299	-2	299	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTGGTTGTCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43040020	43039368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43039400_43040000
WTC11_00074556	chr5	-	3283	10	NIC	ENSG00000112972.15	novel	5350	11	NA	NA	16	0	intron_retention	FALSE	canonical	3	13	junction_7	81.6346876163694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	-43278069	True	NA	-11	True	AATAAA	-20	NA	43313396	43289394	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298517_43298976_43307765_43307825_43313355
WTC11_00074557	chr5	-	2844	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	-354	intron_retention	FALSE	canonical	1	3	junction_3	28.4473197331489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGGCCTTATTTAAGAA	-43482518	True	NA	53	True	AATAAA	-13	NA	43483857	43444605	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43446558_43453657_43454044_43476113_43476486_43479889_43479988_43483821
WTC11_00074559	chr5	-	1745	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	0	49758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.756019290162	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGCTTTTGTATCAGT	-43548130	True	NA	NA	False	NA	NA	NA	43557077	43476508	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43476538_43527093_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
WTC11_00074561	chr5	-	2580	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	0	13506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.756019290162	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGGTGGGGCATAAAAG	-43548130	True	NA	NA	False	NA	NA	NA	43557077	43512760	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43512802_43526270_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
WTC11_00074562	chr5	-	2834	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	0	13506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	368.738748252485	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGGTGGGGCATAAAAG	-43548146	True	NA	NA	False	NA	NA	NA	43557093	43512760	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43512803_43526270_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
WTC11_00074563	chr5	-	412	2	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGTAGACACTCAACAC	-44236767	False	NA	NA	False	NA	NA	NA	44236782	44236339	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_44236613_44236643
WTC11_00074566	chr5	-	1424	8	NNC	ENSG00000164172.20	novel	3705	7	NA	NA	-48	90784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.7367107945725	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGCAACTAAACTTAGAA	-53106755	True	NA	NA	False	NA	NA	NA	53109825	53004894	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_53004935_53098067_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
WTC11_00074567	chr5	-	757	1	FSM	ENSG00000272416.1	ENST00000606482.1	759	1	-2	4	-2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGTGAAGTTTTTGCCT	-53881041	False	NA	-4	True	AATAAA	-14	NA	53881053	53880296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53880300_53881100
WTC11_00074568	chr5	-	4557	27	FSM	ENSG00000067248.11	ENST00000504778.5	4557	27	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	64.3226887188624	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTTTTGCTCATCGTT	-55303199	True	NA	-6	True	AATAAA	-14	NA	55307694	55256248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283115_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
WTC11_00074570	chr5	-	2383	15	FSM	ENSG00000177058.12	ENST00000508124.5	2370	15	0	-13	0	0	multi-exon	FALSE	canonical	2	5	junction_12	42.7813615720583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709445	True	NA	0	True	AATAAA	-29	NA	55712315	55625844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55697845_55697993_55711451_55711500_55712216
WTC11_00074571	chr5	-	2400	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	3	-2	combination_of_known_junctions	TRUE	canonical	2	5	junction_5	43.373555377931	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACTCCTCTTTTATTTC	-55709442	True	NA	-5	True	AATAAA	-24	NA	55712312	55625849	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
WTC11_00074573	chr5	-	6811	4	FSM	ENSG00000134352.20	ENST00000583149.1	479	4	80	-6412	-51	-157	multi-exon	FALSE	canonical	3	17	junction_3	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTATCTAGAATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	55951557	55935281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55941820_55942669_55942752_55947492_55947590_55951463
WTC11_00074574	chr5	-	1985	13	ISM	ENSG00000134352.20	ENST00000651614.1	8412	18	4	15331	4	3999	5prime_fragment	FALSE	canonical	3	10	junction_8	3.83242742918897	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCAGAAATTATACTAT	-55994054	True	NA	NA	False	NA	NA	NA	55995018	55951980	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_55952076_55952249_55952352_55954809_55954993_55956024_55956236_55957208_55957292_55960401_55960562_55963351_55963507_55964145_55964313_55968275_55968397_55969549_55969856_55976214_55976294_55982723_55982812_55994783
WTC11_00074575	chr5	-	1984	12	NNC	ENSG00000049167.16	novel	2095	13	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_11	35.3406094696448	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-60943259	True	NA	-1	True	AATAAA	-19	NA	60945021	60873832	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928958_60944931
WTC11_00074576	chr5	-	1738	10	FSM	ENSG00000049167.16	ENST00000683052.1	1738	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	39.1467640527601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAATGCTGTAATAAAA	-60943246	True	NA	-38	True	NA	NA	NA	60945008	60873869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60944931
WTC11_00074579	chr5	-	712	2	Genic_Genomic	ENSG00000268942.2	novel	237	1	NA	NA	26	41431	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGCTATCTACAGACAA	NA	False	NA	NA	False	AAAAAG	-2	NA	62512456	62470814	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_62470846_62511775
WTC11_00074580	chr5	-	703	1	FSM	ENSG00000268942.2	ENST00000600888.2	237	1	26	-492	26	492	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATATCCTTGGGGAT	NA	False	NA	NA	False	AATAAA	-4	NA	62512456	62511753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62511800_62512500
WTC11_00074581	chr5	-	940	3	FSM	ENSG00000153006.16	ENST00000651194.1	1280	3	340	0	340	0	multi-exon	FALSE	canonical	3	299	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCATTCTTCTACACC	NA	False	NA	NA	False	AAAAAG	-39	NA	64741781	64724431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_64724574_64728106_64728180_64741056
WTC11_00074583	chr5	-	589	4	FSM	ENSG00000250421.5	ENST00000506819.1	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.8878405775519	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGTTGCTCCCAATG	-67818001	True	NA	NA	False	NA	NA	NA	67818322	67699450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67699726_67701490_67701653_67817939_67818049_67818279
WTC11_00074584	chr5	-	2006	10	FSM	ENSG00000183323.13	ENST00000383374.6	2006	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.86893895388634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTAGGCCTAGTGGCGC	-69331957	True	NA	NA	False	AATACA	-6	NA	69332809	69282057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69283035_69285336_69285468_69300011_69300128_69303846_69303930_69306816_69306903_69307950_69308029_69311117_69311205_69313984_69314044_69320236_69320581_69332764
WTC11_00074586	chr5	-	1158	4	NNC	ENSG00000273841.6	novel	1296	4	NA	NA	0	44052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	829.079945213702	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGAGACAAGGTCTCAC	-69353022	True	NA	NA	False	NA	NA	NA	69369490	69317973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_69317999_69364742_69365755_69366502_69366596_69369462
WTC11_00074587	chr5	-	439	3	ISM	ENSG00000253203.6	ENST00000509348.2	423	4	33124	-65	33124	65	3prime_fragment	FALSE	canonical	3	50	junction_2	13.5	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACCAGGTAAGCGGTGT	NA	False	NA	NA	False	NA	NA	NA	69646069	69640200	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_69640367_69642204_69642290_69645881
WTC11_00074588	chr5	-	298	1	FSM	ENSG00000249230.1	ENST00000504393.1	298	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGAGTAGGCAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	69985501	69985203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69985200_69985500
WTC11_00074589	chr5	-	885	6	Fusion	ENSG00000254701.3_ENSG00000253816.3	novel	584	4	NA	NA	-18048	-4622	multi-exon	FALSE	canonical	3	59	junction_5	11.9899958298575	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACCAGGTAAGCGGTGT	NA	False	NA	NA	False	NA	NA	NA	70225793	70201876	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_70202043_70203880_70203966_70207557_70207746_70219917_70220093_70221930_70222016_70225607
WTC11_00074590	chr5	-	1617	7	Fusion	ENSG00000196302.5_ENSG00000253333.1	novel	371	3	NA	NA	-21334	14234	multi-exon	FALSE	canonical	0	0	junction_2	11.5854314646552	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	70522237	70480865	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_70481539_70495023_70495199_70497036_70497122_70500716_70500904_70516307_70516483_70518320_70518406_70522000
WTC11_00074591	chr5	-	4962	1	FSM	ENSG00000254335.1	ENST00000518435.1	295	1	-440	-4227	-440	4227	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	70861019	70856057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70856100_70861000
WTC11_00074592	chr5	-	913	9	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	3	-27	combination_of_known_splicesites	FALSE	canonical	3	49	junction_8	229.577737378867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTGTAAGTTGGTTG	NA	False	NA	-12	True	ATTAAA	-19	NA	71067671	71055056	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
WTC11_00074593	chr5	-	324	2	Fusion	ENSG00000235558.3_ENSG00000215630.6	novel	584	4	NA	NA	-12321	-10331	multi-exon	FALSE	canonical	3	32	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGAACACCCCGCCTACC	NA	False	NA	NA	False	NA	NA	NA	71220451	71207976	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_71208131_71220281
WTC11_00074594	chr5	-	239	1	FSM	ENSG00000272081.1	ENST00000606587.1	494	1	19	236	19	-236	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCCTCTGACCTCTAACAC	-72955654	False	NA	NA	False	NA	NA	NA	72955680	72955441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72955400_72955700
WTC11_00074595	chr5	-	2665	13	NIC	ENSG00000198780.13	novel	6125	13	NA	NA	-292	-3837	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	63.8056946256889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTTAAAATATGGTAA	-74865908	False	NA	-70	True	GATAAA	-24	NA	74865931	74781412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74865329
WTC11_00074596	chr5	-	1234	1	FSM	ENSG00000176928.7	ENST00000322348.5	5554	1	4268	52	4268	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGATTCTCTGGTA	NA	False	NA	-53	True	AATAGA	-31	NA	75026631	75025397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75025400_75026600
WTC11_00074600	chr5	-	5553	4	NIC	ENSG00000145685.14	novel	4977	5	NA	NA	-246	297	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	75.8463358816144	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTCCGAAGTATTAAA	-78649126	False	NA	NA	False	AGTAAA	-15	NA	78649141	78484917	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_78489154_78509783_78510399_78564812_78564872_78648498
WTC11_00074601	chr5	-	4345	4	NIC	ENSG00000145685.14	novel	4977	5	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	80.0291613517639	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTATTCTTTCAAGTCTG	-78648740	False	1539	-23	True	ATTAAA	-18	NA	78648755	78485229	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_78489154_78564812_78564872_78632263_78632369_78648498
WTC11_00074602	chr5	-	8953	2	ISM	ENSG00000177034.17	ENST00000512528.3	7931	9	3807	11	3790	4	intron_retention	FALSE	canonical	3	21	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTATGAATTCTCGATT	-79985532	False	NA	-11	True	AATAAA	-18	NA	79987455	79976726	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_79983795_79985570
WTC11_00074603	chr5	-	1441	13	FSM	ENSG00000164300.17	ENST00000509193.5	1441	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	26.9921542098605	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTTACCCACCCCCTT	-80242339	True	NA	NA	False	NA	NA	NA	80256019	80111650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80111703_80113571_80113626_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
WTC11_00074604	chr5	-	568	1	FSM	ENSG00000248569.1	ENST00000514280.1	936	1	190	178	190	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGCCCCAGATGCCGG	NA	False	NA	NA	False	NA	NA	NA	80351766	80351198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80351200_80351800
WTC11_00074605	chr5	-	3869	5	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-172	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_2	5.24404424085076	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-80570281	True	NA	0	True	AATAAA	-15	NA	80570452	80556754	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80560043_80563734_80563816_80566688_80566772_80568959_80569078_80570153
WTC11_00074606	chr5	-	542	6	FSM	ENSG00000189127.8	ENST00000508916.1	542	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.24819974072532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATCAGAGCCGGCTTCG	-80570079	False	NA	NA	False	NA	NA	NA	80570250	80559968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80560043_80563734_80563816_80564383_80564470_80566688_80566775_80568959_80569078_80570153
WTC11_00074607	chr5	-	1694	3	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	2635	-4765	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACCATCTCAAAAAAAAA	-80567444	False	NA	NA	False	NA	NA	NA	80567615	80564733	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80565827_80566688_80566772_80567097
WTC11_00074608	chr5	-	1474	5	FSM	ENSG00000228716.7	ENST00000511032.5	1474	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	360.349396419642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCCTGCCTCAGGCTC	-80653153	False	NA	NA	False	NA	NA	NA	80654552	80628123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80629166_80637882_80638010_80649388_80649495_80654007_80654058_80654403
WTC11_00074610	chr5	-	2373	2	FSM	ENSG00000247572.9	ENST00000663674.1	2373	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCGAAATCCTGTAAAAT	-81299379	True	NA	NA	False	NA	NA	NA	81301472	81201340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81203528_81301286
WTC11_00074612	chr5	-	1575	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	11	4	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	36.5106218819138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTCTGATGCAAGTTAT	-81616257	False	NA	-30	True	AATAAA	-28	NA	81616462	81419931	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
WTC11_00074613	chr5	-	1686	17	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	37	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	41.1185405261422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCGTCTGATGCAAGT	-81751741	False	NA	-33	True	AATAAA	-25	NA	81751760	81419934	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81751667
WTC11_00074619	chr5	-	639	1	FSM	ENSG00000280009.1	ENST00000624021.1	917	1	317	-39	317	39	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGCCACAATGTAATGTTG	NA	False	NA	NA	False	AATAAA	-36	NA	86305832	86305193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_86305200_86305800
WTC11_00074620	chr5	-	314	1	FSM	ENSG00000242477.1	ENST00000486625.1	651	1	250	87	250	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTGTCATTGCTCAA	NA	False	NA	NA	False	NA	NA	NA	86884631	86884317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_86884300_86884600
WTC11_00074621	chr5	-	315	2	FSM	ENSG00000081189.16	ENST00000515715.2	520	2	7	198	-2	170	multi-exon	FALSE	canonical	3	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCCCAGAAAATTAACATA	NA	False	NA	NA	False	NA	NA	NA	88749117	88731634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88731902_88749069
WTC11_00074622	chr5	-	950	1	FSM	ENSG00000260871.1	ENST00000562820.1	896	1	-153	99	-153	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTCTATTTCATGTCG	-90389501	False	NA	NA	False	AAGAAA	-35	NA	90389516	90388566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90388600_90389500
WTC11_00074625	chr5	-	1832	2	ISM	ENSG00000185261.15	ENST00000329378.7	2262	5	94543	5	-46870	-5	3prime_fragment	FALSE	canonical	3	7	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATATATGAATTTTCAA	NA	False	NA	6	True	AATAAA	-21	NA	94524054	94519210	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_94520918_94523929
WTC11_00074628	chr5	-	768	1	NIC	ENSG00000164307.13	novel	5495	20	NA	NA	4276	-221	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATTCTTCTCATTTTA	NA	False	NA	NA	False	AATAAA	-3	NA	96776905	96776137	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_96776100_96776900
WTC11_00074630	chr5	-	6600	37	NIC	ENSG00000153922.11	novel	8145	36	NA	NA	50	-12	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	52.7605454323682	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCCTTTCTCAGGCTT	-98922720	True	NA	-12	True	ATTAAA	-16	NA	98928957	98855743	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869013_98869278_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
WTC11_00074632	chr5	-	1360	1	FSM	ENSG00000271207.1	ENST00000604619.1	1360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAGACGAAAAAGGAAGGA	NA	False	NA	NA	False	CATAAA	-2	NA	100055045	100053685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_100053700_100055000
WTC11_00074633	chr5	-	3578	2	ISM	ENSG00000250682.6	ENST00000658823.1	1553	4	18537	-2268	18537	-2009	3prime_fragment	FALSE	canonical	2	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTCCTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	102617897	102606228	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_102609767_102617857
WTC11_00074634	chr5	-	3330	7	FSM	ENSG00000145723.17	ENST00000512248.5	3325	7	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_5	20.8379994774504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGACTTTGTTACAG	-103119445	True	NA	2	True	AATAAA	-24	NA	103120108	103085994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103108568_103108715_103120063
WTC11_00074636	chr5	-	3503	8	NNC	ENSG00000112874.10	novel	3488	7	NA	NA	0	82292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.1131273959764	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCATTTGATTGCTGTT	-103561485	True	NA	NA	False	ATTAAA	-15	NA	103562789	103466562	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_103466580_103548856_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
WTC11_00074637	chr5	-	609	3	FSM	ENSG00000251027.2	ENST00000505997.1	602	3	0	-7	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAATGGCTTTTGAGAT	-106980498	True	NA	-5	True	ATTAAA	-19	NA	106980869	106815197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_106815547_106844060_106844215_106980763
WTC11_00074638	chr5	-	434	2	NNC	ENSG00000251027.2	novel	602	3	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATCCCATCTGAATGG	-106980491	True	NA	-15	True	ATTAAA	-9	NA	106980862	106815207	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_106815543_106980763
WTC11_00074639	chr5	-	3637	1	Genic_Genomic	ENSG00000184349.14	novel	NA	NA	NA	NA	8024	1	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCCCTCCTTCTACTTG	NA	False	NA	-15	True	AATAAA	-26	NA	107380529	107376892	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_107376900_107380500
WTC11_00074640	chr5	-	975	1	FSM	ENSG00000271849.1	ENST00000606424.1	528	1	-454	7	-454	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGAGTTTTTCGTGTA	-109688709	False	NA	-8	True	ATTAAA	-9	NA	109688783	109687808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109687800_109688800
WTC11_00074641	chr5	-	211	1	FSM	ENSG00000202512.1	ENST00000365642.1	335	1	-6	130	-6	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCTGGAACCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	109699840	109699629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109699600_109699800
WTC11_00074642	chr5	-	238	1	FSM	ENSG00000249068.1	ENST00000510014.1	565	1	374	-47	374	47	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTTAATGACTGAGG	NA	False	NA	NA	False	NA	NA	NA	109840318	109840080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109840100_109840300
WTC11_00074643	chr5	-	1689	1	FSM	ENSG00000248966.1	ENST00000505813.1	2752	1	692	371	692	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCATGAGGAACCTTTTT	NA	False	NA	NA	False	AATGAA	-29	NA	110950088	110948399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_110948400_110950100
WTC11_00074644	chr5	-	4631	7	NNC	ENSG00000164211.13	novel	4631	6	NA	NA	0	36346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.009634216535	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTCTCTAAACTCAAAG	-111507739	True	NA	NA	False	NA	NA	NA	111512510	111459686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_111459713_111496033_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
WTC11_00074645	chr5	-	2507	1	NIC	ENSG00000164211.13	novel	766	5	NA	NA	6256	2507	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTCACAAAAATGGTATCT	-111506205	False	NA	NA	False	AAGAAA	-16	NA	111506215	111503708	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_111503700_111506200
WTC11_00074646	chr5	-	4832	24	NNC	ENSG00000129595.14	novel	4670	23	NA	NA	-518	4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_23	7.10680070475378	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCGTTTCCTGCAAAG	-112419613	False	NA	4	True	AATAAA	-24	NA	112419831	112162614	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_112165119_112168738_112168821_112168994_112169106_112170300_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420_112205505_112209891_112209983_112234633_112234756_112239659_112239738_112240718_112240811_112259228_112259293_112259890_112259980_112262493_112262582_112264895_112265017_112266232_112266331_112275325_112275405_112280271_112280324_112307385_112307491_112418940_112419363_112419758
WTC11_00074648	chr5	-	552	6	FSM	ENSG00000164219.10	ENST00000296642.4	552	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	146.880359476684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTTTCTTTGTGAA	-115248844	False	NA	NA	False	NA	NA	NA	115253176	115216864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115216974_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253132
WTC11_00074649	chr5	-	3484	4	FSM	ENSG00000251201.8	ENST00000282382.8	3491	4	0	7	0	2	multi-exon	FALSE	canonical	1	7	junction_1	163.099833094812	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACTAAACTTGTTTA	-115626018	False	NA	NA	False	AATAAA	-16	NA	115626161	115578648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115581198_115616317_115616446_115620434_115620681_115625600
WTC11_00074650	chr5	-	1259	6	NNC	ENSG00000168938.6	novel	1364	5	NA	NA	0	8918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.3262554504179	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCACAGTGGCGTGT	-123033828	True	NA	NA	False	NA	NA	NA	123036725	123014331	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_123014360_123023382_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
WTC11_00074651	chr5	-	4886	21	NNC	ENSG00000168944.17	novel	4667	21	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.3866733846336	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGTTCTTGAGCAGC	-123420609	True	NA	-6	True	AATAAA	-17	NA	123423387	123344891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949_123423031_123423121
WTC11_00074652	chr5	-	3484	19	FSM	ENSG00000168944.17	ENST00000675444.1	3566	19	33	49	15	-49	multi-exon	FALSE	canonical	0	0	junction_12	37.402919606118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTGTCCCTTTCTCAA	-123420610	True	NA	NA	False	AAGAAA	-30	NA	123423388	123358292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123358807_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
WTC11_00074653	chr5	-	6512	11	NIC	ENSG00000168916.16	novel	6152	10	NA	NA	0	486	combination_of_known_junctions	FALSE	canonical	2	15	junction_10	18.9338321530534	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTGTCTTCATGGAGC	-124747479	True	NA	NA	False	AGTAAA	-14	NA	124748807	124636426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124638781_124638824_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
WTC11_00074654	chr5	-	1606	6	NIC	ENSG00000168916.16	novel	2686	8	NA	NA	34	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.7499253729681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATAATGGCTTCT	-124747445	True	NA	7	True	ATTAAA	-11	NA	124748773	124636926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124638781_124638824_124639132_124639215_124643510_124643684_124649609_124649698_124748532
WTC11_00074656	chr5	-	558	1	FSM	ENSG00000251456.1	ENST00000507630.1	558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAGCACACCCTCCC	-124735156	False	NA	NA	False	ATTAAA	-45	NA	124735175	124734617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124734600_124735200
WTC11_00074657	chr5	-	409	1	FSM	ENSG00000242814.2	ENST00000464124.2	406	1	-21	18	-21	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACCAAGAACTCCTGA	NA	False	NA	NA	False	NA	NA	NA	124809254	124808845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124808800_124809300
WTC11_00074658	chr5	-	2501	19	FSM	ENSG00000164904.18	ENST00000636879.1	2501	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	219.62290914707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTTTACCAAAAAATAC	-126582412	True	NA	NA	False	NA	NA	NA	126595219	126544149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582104_126582150_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
WTC11_00074659	chr5	-	2530	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	112	-3	-18	0	multi-exon	FALSE	canonical	1	3	junction_17	173.333249046204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTTTACCAAAAAATAC	-126582443	True	NA	NA	False	NA	NA	NA	126595250	126544149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
WTC11_00074662	chr5	-	4028	2	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTGGTCTCTTC	-126845465	False	NA	-1	True	AATAAA	-22	NA	126845477	126839372	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_126843030_126845106
WTC11_00074663	chr5	-	856	1	FSM	ENSG00000250859.1	ENST00000510896.1	1379	1	602	-79	602	79	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTAGGTGTTCTGCAT	-127512226	False	NA	NA	False	AAAAAG	-14	NA	127512240	127511384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127511400_127512200
WTC11_00074664	chr5	-	2712	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	497	0	-497	multi-exon	FALSE	canonical	0	0	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACACAAGGATCTAACAC	-128083058	False	NA	NA	False	NA	NA	NA	128083131	128022084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_128024299_128061143_128061245_128082734
WTC11_00074665	chr5	-	2277	2	FSM	ENSG00000249421.2	ENST00000502827.1	786	2	-473	-1018	-86	1018	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAACCTAAATGCTTTTT	-129461144	False	NA	NA	False	AAGAAA	-14	NA	129461162	129458540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_129460080_129460424
WTC11_00074666	chr5	-	495	1	NIC	ENSG00000249421.2	novel	3103	4	NA	NA	497	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCGGGACAAAGGTC	-129460174	False	NA	NA	False	AAAAAG	-26	NA	129460192	129459697	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_129459700_129460200
WTC11_00074667	chr5	-	8492	29	FSM	ENSG00000158987.22	ENST00000296859.10	5618	29	0	-2874	0	236	multi-exon	FALSE	canonical	1	1	junction_8	12.4414444827089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGGGCTTGTCTTTTT	-131632179	False	NA	NA	False	TTTAAA	-44	NA	131635111	131423684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131450022_131450047_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
WTC11_00074668	chr5	-	2066	10	FSM	ENSG00000164398.15	ENST00000493861.5	2066	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	3.33703498170693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGATATATTCTACTTAA	-131973998	False	NA	NA	False	ATTAAA	-17	NA	131974035	131953903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131954372_131959535_131959608_131960519_131960622_131962534_131962679_131966415_131966533_131967939_131968029_131970127_131970201_131971549_131971646_131972723_131972859_131973265
WTC11_00074669	chr5	-	484	4	FSM	ENSG00000164398.15	ENST00000419502.5	934	4	450	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.05480466765633	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAAAATCGGCCAGAGG	NA	False	NA	NA	False	NA	NA	NA	131994251	131989425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131989509_131990099_131990165_131990852_131990968_131994030
WTC11_00074670	chr5	-	482	2	FSM	ENSG00000125347.15	ENST00000472045.1	5153	2	802	3869	-28	0	multi-exon	FALSE	canonical	3	20	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCAAGGACTCTGGGTC	-132488205	False	NA	5	True	NA	NA	NA	132488230	132486953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132487131_132487925
WTC11_00074672	chr5	-	2507	7	ISM	ENSG00000164403.15	ENST00000617339.4	3638	8	1244	-19	-152	-1	3prime_fragment	FALSE	canonical	3	21	junction_2	2.98142396999972	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGTCATCTGCAG	-132825421	False	86	-3	True	AATAAA	-14	NA	132825434	132822141	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_132823129_132823249_132823523_132823622_132823765_132823849_132824420_132824614_132824822_132825017_132825074_132825162
WTC11_00074676	chr5	-	716	4	FSM	ENSG00000053108.17	ENST00000510685.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.18993502999218	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCCGTCTGCAGCCACT	-133583628	False	NA	NA	False	NA	NA	NA	133583641	133316596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133316653_133400737_133400987_133567185_133567220_133583264
WTC11_00074677	chr5	-	470	1	FSM	ENSG00000279197.1	ENST00000624830.1	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTTTCTGCTTTCTT	-133575285	False	NA	NA	False	AATAAA	-16	NA	133575298	133574828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133574800_133575300
WTC11_00074678	chr5	-	635	4	FSM	ENSG00000213585.11	ENST00000492324.1	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_3	57.632938113162	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTTCAGAATTTAGTG	-133980991	False	NA	NA	False	CATAAA	-45	NA	133981017	133972725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728
WTC11_00074679	chr5	-	484	2	FSM	ENSG00000113575.10	ENST00000472253.1	574	2	90	0	90	0	multi-exon	FALSE	canonical	3	1561	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCATATAAAAATACAAAGC	-134199336	False	NA	NA	False	NA	NA	NA	134199360	134197635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134197845_134199085
WTC11_00074680	chr5	-	1008	6	ISM	ENSG00000273345.5	ENST00000520515.5	1744	10	0	102387	0	-102047	5prime_fragment	FALSE	canonical	2	5	junction_5	3.26190128606002	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370822	True	NA	0	True	ATTAAA	-17	NA	134371043	134308000	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_134308467_134308573_134308728_134312291_134312381_134319357_134319498_134321790_134321904_134370997
WTC11_00074681	chr5	-	326	1	FSM	ENSG00000244921.2	ENST00000501056.2	747	1	-12	433	-12	-433	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTCTTTACCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	134924061	134923735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134923700_134924100
WTC11_00074682	chr5	-	8422	4	FSM	ENSG00000113648.17	ENST00000512507.5	10982	4	2651	-91	2651	91	multi-exon	FALSE	canonical	3	587	junction_1	52.7825728815866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCTCAACCCCCACCC	-135360219	False	NA	84	True	NA	NA	NA	135360250	135334289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945
WTC11_00074683	chr5	-	855	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	9	-121	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	283.384826693315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAGTTAACTAATATT	-135389265	True	NA	-7	True	AATAAA	-29	NA	135399195	135359842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
WTC11_00074684	chr5	-	1570	10	FSM	ENSG00000146021.15	ENST00000505853.1	1570	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	10.8115164934846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGGCGGCAGTGGCC	-137735766	True	NA	NA	False	NA	NA	NA	137736015	137637293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137735632
WTC11_00074685	chr5	-	5466	23	FSM	ENSG00000031003.11	ENST00000033079.7	5465	23	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_21	4.15032608496853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTAAATGTATGTTTG	-138031538	True	NA	-7	True	AATAAA	-20	NA	138033031	137937958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137946227_137946312_137948954_137949185_137952627_137952710_137953335_137953466_137954165_137954377_137959615_137959764_137960165_137960215_137962404_137962470_137985256_137985390_137987460_137987617_137988273_137988316_138006989_138007148_138011007_138011150_138011767_138011946_138018301_138018515_138018954_138019147_138021030_138021198_138032781
WTC11_00074686	chr5	-	3361	23	NNC	ENSG00000112983.18	novel	3198	22	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	189.3752069524	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGCTTGTTCTGTGT	-138168666	True	NA	-2	True	AATAAA	-17	NA	138178618	138156883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138157268_138157641_138157819_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00074687	chr5	-	3285	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_11	161.927174989252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-138178657	True	NA	-33	True	TTTAAA	-25	NA	138178960	138156914	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
WTC11_00074690	chr5	-	1862	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	63.1728580958627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATTGTGAGCCTAGCC	-138329443	True	NA	-11	True	AATAAA	-17	NA	138331791	138285267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
WTC11_00074691	chr5	-	3684	12	NNC	ENSG00000120705.13	novel	3682	11	NA	NA	0	30389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.337444496865	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAAGGGGCTCGCTCTGT	-138528675	True	NA	NA	False	NA	NA	NA	138543209	138475705	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138475735_138506094_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
WTC11_00074692	chr5	-	3322	18	NNC	ENSG00000113013.16	novel	4404	17	NA	NA	0	56230	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	681.669683272936	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGCACCATTTTGTT	-138533519	True	NA	NA	False	AAAAAG	-2	NA	138575411	138497525	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138497560_138554881_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
WTC11_00074695	chr5	-	496	5	FSM	ENSG00000120725.13	ENST00000505830.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	20.3100960115899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGCAAAAGGTACAGTG	-139197192	True	NA	NA	False	NA	NA	NA	139198304	139050949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139051047_139121034_139121174_139127738_139127854_139127943_139128053_139198268
WTC11_00074696	chr5	-	760	4	FSM	ENSG00000170476.16	ENST00000302125.9	925	4	0	165	0	-37	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGGGCCTGGGTGGGAG	-139389821	False	NA	-64	True	NA	NA	NA	139389913	139387631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139387922_139388020_139388132_139388460_139388586_139389679
WTC11_00074697	chr5	-	1115	8	NIC	ENSG00000170464.10	novel	655	5	NA	NA	20	22	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	53.0967541957364	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGCTAAGCCCTCATTG	-139437064	True	NA	NA	False	ATTAAA	-40	NA	139439481	139419045	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_139419173_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
WTC11_00074698	chr5	-	362	1	FSM	ENSG00000275506.1	ENST00000619270.1	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGGAAACATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	139612363	139612001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139612000_139612400
WTC11_00074699	chr5	-	1315	5	NNC	ENSG00000113068.10	novel	1336	4	NA	NA	0	783	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.844765853509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCTTGGCTGGCC	-140295730	True	NA	NA	False	NA	NA	NA	140303086	140244251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_140244278_140245066_140246058_140281448_140281534_140300415_140300583_140303040
WTC11_00074701	chr5	-	3332	11	NIC	ENSG00000113108.20	novel	2020	13	NA	NA	24	458	intron_retention	FALSE	canonical	3	15	junction_6	19.8655480669424	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGAGGAGGCTGTAG	-140564209	False	NA	NA	False	NA	NA	NA	140564221	140557809	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140562228_140562352_140562500_140562662_140563671_140563751_140563916_140564196
WTC11_00074707	chr5	-	5745	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	104.536497390596	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGAATTTCT	-141613775	True	NA	-1	True	AATAAA	-24	NA	141619001	141515011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
WTC11_00074712	chr5	-	325	1	FSM	ENSG00000278925.1	ENST00000623837.1	618	1	224	69	224	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTTCTGTGGCTATAA	NA	False	NA	-67	True	NA	NA	NA	141826101	141825776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141825800_141826100
WTC11_00074714	chr5	-	2376	8	NNC	ENSG00000113552.16	novel	2267	7	NA	NA	-67	14971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.896729008349	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAGAAAGGCAGCTGG	-142003289	True	NA	NA	False	NA	NA	NA	142013108	141976777	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141976806_142000670_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
WTC11_00074715	chr5	-	2157	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	98	0	98	0	multi-exon	FALSE	canonical	0	0	junction_5	107.38826751559	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	-144165875	False	NA	-4	True	ATTAAA	-15	NA	144170532	144159272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
WTC11_00074716	chr5	-	1641	9	NIC	ENSG00000186314.12	novel	2140	8	NA	NA	2	505	combination_of_known_junctions	TRUE	canonical	2	6	junction_5	26.8627879230731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCGTTATGATGATTAAA	-145833820	True	NA	NA	False	NA	NA	NA	145835334	145759750	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145825997_145826201_145835176
WTC11_00074718	chr5	-	7034	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	22	84	-4	-84	multi-exon	FALSE	canonical	2	9	junction_31	315.329377040855	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAAGAATTGGCCAGT	-146160860	True	NA	NA	False	NA	NA	NA	146182674	146110649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
WTC11_00074722	chr5	-	5348	15	NNC	ENSG00000113657.13	novel	5309	14	NA	NA	0	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	282.690318770436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	-147453914	False	NA	NA	False	NA	NA	NA	147453959	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378880_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
WTC11_00074724	chr5	-	5387	16	NNC	ENSG00000113657.13	novel	5309	14	NA	NA	-150	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	350.945896431661	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	NA	False	NA	NA	False	NA	NA	NA	147454416	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378879_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548_147453755_147454171
WTC11_00074726	chr5	-	5388	16	NNC	ENSG00000113657.13	novel	5309	14	NA	NA	-150	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	350.945896431661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	NA	False	NA	NA	False	NA	NA	NA	147454416	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378880_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548_147453755_147454171
WTC11_00074727	chr5	-	5594	16	NNC	ENSG00000113657.13	novel	5309	14	NA	NA	-150	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	360.045342823496	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	NA	False	NA	NA	False	NA	NA	NA	147454416	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378882_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548_147453755_147453967
WTC11_00074728	chr5	-	5529	15	NNC	ENSG00000113657.13	novel	5492	14	NA	NA	0	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	326.495562053784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	-147509460	True	NA	NA	False	NA	NA	NA	147510068	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378881_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
WTC11_00074729	chr5	-	5780	15	NNC	ENSG00000113657.13	novel	5492	14	NA	NA	-250	11967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	326.495562053784	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGGCATTATTACAC	-147510302	False	NA	NA	False	NA	NA	NA	147510318	147378840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_147378882_147390810_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
WTC11_00074730	chr5	-	3235	20	NIC	ENSG00000176049.16	novel	6001	21	NA	NA	19	216	combination_of_known_junctions	FALSE	canonical	2	10	junction_12	17.3216275552684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTTTCTTACTACAGG	-147782015	True	NA	-3	True	AATAAA	-17	NA	147782709	147591145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
WTC11_00074733	chr5	-	208	1	FSM	ENSG00000251583.1	ENST00000503102.1	655	1	461	-14	461	14	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTCTCAAAAATATTATC	NA	False	NA	NA	False	NA	NA	NA	149932207	149931999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149932000_149932200
WTC11_00074734	chr5	-	2169	2	FSM	ENSG00000164296.7	ENST00000515406.2	2429	2	260	0	259	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTGAGCCAATTTAAG	-150000336	False	NA	-3	True	AATAAA	-15	NA	150000394	149994727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149996430_149999927
WTC11_00074735	chr5	-	732	3	Antisense	novelGene_ENSG00000164591.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	14.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGATAAAATC	-150668275	False	NA	-33	True	ATTAAA	-1	NA	150668538	150665605	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_150666032_150668116_150668270_150668385
WTC11_00074736	chr5	-	4221	6	NIC	ENSG00000145908.13	novel	3323	7	NA	NA	0	4	intron_retention	FALSE	canonical	3	20	junction_3	61.0999181668846	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTTCACTTCTTTGT	-150904779	False	NA	-10	True	CATAAA	-32	NA	150904789	150894387	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
WTC11_00074737	chr5	-	336	2	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAGAGAACAAACCCCCT	NA	False	NA	NA	False	AAAAAG	-38	NA	153452977	153449874	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_153450145_153452911
WTC11_00074742	chr5	-	3128	6	NIC	ENSG00000135083.17	novel	3560	8	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	91.9565114605812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTTGTCCTAGGCATC	-160309828	True	NA	-3	True	AATAAA	-24	NA	160312561	160251653	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_160253799_160254128_160254336_160255548_160255709_160259468_160259772_160311857_160311973_160312363
WTC11_00074764	chr5	-	1734	14	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	50.6695992092267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004694	True	NA	-10	True	AATATA	-1	NA	177006720	176905049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
WTC11_00074765	chr5	-	2525	15	NNC	ENSG00000087206.17	novel	2574	15	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.3802998687891	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004740	True	NA	-10	True	AATATA	-1	NA	177006766	176905049	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911302_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
WTC11_00074766	chr5	-	2551	16	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	63.083507265282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTTTGTACGAAAT	-177004694	True	NA	-12	True	TTTAAA	-3	NA	177006720	176905051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176919169_176919252_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
WTC11_00074777	chr5	-	4208	11	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_10	78.7111173850302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGTACTGCTGGCCCA	-177552429	True	NA	-62	True	NA	NA	NA	177554563	177519930	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177547167_177547229_177553167
WTC11_00074780	chr5	-	1955	13	FSM	ENSG00000113240.14	ENST00000522136.5	1955	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	35.9755897179679	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGTACTAGAAACCAA	-178625307	True	NA	-79	True	NA	NA	NA	178627055	178603167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178605824_178605866_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
WTC11_00074783	chr5	-	2822	11	FSM	ENSG00000250420.8	ENST00000503486.6	2822	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2916164657906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCTGTGGACTATAAA	-178818410	False	NA	-3	True	AATAAA	-25	NA	178818435	178764860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178766176_178767129_178767336_178768469_178768665_178772428_178772632_178774497_178774549_178775266_178775337_178776141_178776277_178797530_178797612_178811173_178811287_178814897_178815009_178818093
WTC11_00074785	chr5	-	1117	5	ISM	ENSG00000169045.17	ENST00000329433.10	2114	12	5561	-1	-26	0	3prime_fragment	FALSE	canonical	3	76	junction_1	116.842575716217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTTGTCTGTGCT	-179617596	False	NA	-3	True	AATAAA	-19	NA	179617607	179614179	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513
WTC11_00074789	chr5	-	1886	14	NIC	ENSG00000161013.17	novel	2365	15	NA	NA	36	47	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	89.8379211191238	3030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTGCCCCAACATGC	-179806395	False	NA	25	True	NA	NA	NA	179806518	179797549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799251_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783_179801970_179806486
WTC11_00074796	chr5	-	4955	20	NIC	ENSG00000197226.13	novel	5155	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	63.0181787956917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-179901228	True	NA	-31	True	AATAAA	-21	NA	179907859	179862070	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
WTC11_00074799	chr5	-	588	2	FSM	ENSG00000131446.17	ENST00000514283.1	619	2	31	0	12	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCCCTCGGCTGAGCTC	-180803697	False	NA	NA	False	NA	NA	NA	180803892	180792589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180803812
WTC11_00074804	chr5	-	1226	9	NIC	ENSG00000204628.12	novel	1208	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	5025.99485176816	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103475	True	NA	-16	True	AATAAA	-13	NA	181243902	181236936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240346_181241491_181241640_181242173_181242346_181243691
WTC11_00074805	chr5	-	1586	7	NNC	ENSG00000204628.12	novel	1208	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4831.79186051441	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	-181241597	False	NA	15	True	AATAAA	-5	NA	181241639	181236944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181241097_181241491
WTC11_00074807	chr5	-	1754	8	NIC	ENSG00000204628.12	novel	1058	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	4781.39273963269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGTGCGAGTGTGGC	-181103453	True	NA	-60	True	NA	NA	NA	181243880	181237019	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181240346_181241491_181241640_181242173_181242346_181243691
WTC11_00074809	chr5	-	1464	6	FSM	ENSG00000204628.12	ENST00000502844.5	1460	6	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5148.42556127599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCAGCATCAAGATCTG	-181243328	False	NA	NA	False	NA	NA	NA	181243370	181238119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181242553
WTC11_00074810	chr5	-	1100	6	FSM	ENSG00000204628.12	ENST00000510199.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4991.77714246139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCAGCATCAAGATCTG	-181247534	False	NA	NA	False	NA	NA	NA	181247576	181238119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181247123
WTC11_00074816	chr5	-	581	2	FSM	ENSG00000204628.12	ENST00000514318.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTCATTACTACATTT	-181103481	True	NA	NA	False	AGTAAA	-36	NA	181243908	181243041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181243406_181243691
WTC11_00074818	chr5	+	241	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATCCCACAGCATGCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	18536425	18536666	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18536400_18536700
WTC11_00074819	chr5	+	2335	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACAGAGCAAATATTACA	NA	False	NA	NA	False	NA	NA	NA	70410883	70413218	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_70410900_70413200
WTC11_00074821	chr5	+	1107	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACCCCTTACCATAA	76361298	False	NA	NA	False	NA	NA	NA	76361318	76362425	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76361300_76362400
WTC11_00074822	chr5	+	2480	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGGCGACCAAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	80135133	80137613	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_80135100_80137600
WTC11_00074823	chr5	+	262	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82691310	82691572	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_82691300_82691600
WTC11_00074824	chr5	+	235	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACTCTTAACTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	110534470	110534705	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_110534500_110534700
WTC11_00074825	chr5	+	907	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGAGGGTAACGTGGA	NA	False	NA	NA	False	NA	NA	NA	122475819	122476726	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122475800_122476700
WTC11_00074826	chr5	+	289	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGGTTTTAAGTTTTT	NA	False	NA	NA	False	AAGAAA	-34	NA	122477727	122478016	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122477700_122478000
WTC11_00074828	chr5	+	271	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAGGGTGAGGAAGAG	NA	False	NA	NA	False	AATAAA	-7	NA	136547820	136548091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_136547800_136548100
WTC11_00074829	chr5	+	5899	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCTTCTTGGCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	142761952	142767851	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_142762000_142767900
WTC11_00074832	chr6	+	3415	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	-365	-1884	0	0	multi-exon	FALSE	canonical	3	95	junction_3	35.2442903177238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	290630	True	NA	16	True	AATAAA	-22	NA	292096	351355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
WTC11_00074833	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	49.5745161656796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	290630	True	NA	16	True	AATAAA	-22	NA	292096	351355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
WTC11_00074835	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	40.557572248184	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	292464	False	NA	16	True	AATAAA	-22	NA	292486	351355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
WTC11_00074837	chr6	+	2635	1	FSM	ENSG00000164379.7	ENST00000296839.5	2661	1	16	10	16	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGTGATGATGGGTTG	1312042	False	NA	NA	False	AATAAA	-14	NA	1312113	1314748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_1312100_1314700
WTC11_00074838	chr6	+	3998	1	FSM	ENSG00000054598.9	ENST00000645831.2	3983	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTACGTGGCCTGTGA	1609388	True	NA	11	True	AATAAA	-24	NA	1609899	1613897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_1609900_1613900
WTC11_00074839	chr6	+	2616	7	FSM	ENSG00000124535.16	ENST00000380771.8	2595	7	-21	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	106.571832843184	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGATTCTGTCATGGT	2765303	True	NA	7	True	AATAAA	-15	NA	2765392	2785745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2766445_2768690_2768883_2770194_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
WTC11_00074840	chr6	+	3824	7	FSM	ENSG00000124535.16	ENST00000380773.9	3898	7	0	74	0	-74	multi-exon	FALSE	canonical	3	262	junction_2	33.1612223337239	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTTTTTTTATTCAA	2765303	True	NA	NA	False	NA	NA	NA	2765392	2786878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2766445_2768690_2768883_2770119_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
WTC11_00074841	chr6	+	2675	8	NNC	ENSG00000124535.16	novel	2651	7	NA	NA	0	25799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.719539045873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGGAATGGGTTGG	2762937	True	NA	NA	False	NA	NA	NA	2765431	2812751	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_2766445_2768690_2768883_2770119_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006_2785743_2812725
WTC11_00074842	chr6	+	1766	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	-199	6	-199	-6	multi-exon	FALSE	canonical	3	23	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGAGTGTGGCGTTTCTC	2988265	False	NA	3	True	AATAAA	-17	NA	2988448	2991167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2988710_2989527_2989734_2989868
WTC11_00074843	chr6	+	815	6	FSM	ENSG00000124588.22	ENST00000397717.7	815	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	595.261488759352	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCTCTTGGATAAGG	2987243	True	NA	NA	False	NA	NA	NA	2999893	3015643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3003668_3003790_3006467_3006560_3010024_3010190_3012543_3012675_3015529
WTC11_00074844	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_4	105.311310989002	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987243	True	NA	16	True	AATAAA	-16	NA	2999893	3019755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
WTC11_00074845	chr6	+	864	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	-13	0	0	0	multi-exon	FALSE	canonical	3	381	junction_4	367.097044390172	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999955	False	NA	16	True	AATAAA	-16	NA	2999988	3019755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
WTC11_00074846	chr6	+	1021	7	FSM	ENSG00000124588.22	ENST00000380441.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	591.131589035433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999955	False	NA	16	True	AATAAA	-16	NA	2999988	3019755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
WTC11_00074847	chr6	+	4137	11	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	19.0286625909442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	3062557	True	NA	5	True	AATAAA	-15	NA	3063846	3115187	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
WTC11_00074849	chr6	+	4101	11	FSM	ENSG00000137275.16	ENST00000259808.9	4092	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	55	junction_1	12.6822710899902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	3068471	False	NA	5	True	AATAAA	-15	NA	3068484	3115187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3068662_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
WTC11_00074851	chr6	+	1563	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114.415283694344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	3118315	True	NA	16	True	NA	NA	NA	3118375	3152669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
WTC11_00074852	chr6	+	1928	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	-19	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	22.1409625405542	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	3116636	True	NA	-11	True	AATAAA	-3	NA	3118691	3153578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
WTC11_00074853	chr6	+	2157	9	FSM	ENSG00000137274.13	ENST00000430655.6	2157	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	129.283602981971	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGTAGTGTTAATGTT	3118315	True	NA	2	True	AATAAA	-12	NA	3118375	3153195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137423_3138040_3138180_3140385_3140510_3152487
WTC11_00074854	chr6	+	1063	8	FSM	ENSG00000137274.13	ENST00000433912.5	1063	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	121.164250132636	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAAACTCTCCGCCTT	3116636	True	NA	-8	True	GGGGCT	-30	NA	3118691	3152645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137423_3138040_3138180_3140385_3140510_3152487
WTC11_00074855	chr6	+	4096	7	FSM	ENSG00000137274.13	ENST00000490918.5	3723	7	-407	34	-55	0	multi-exon	FALSE	canonical	2	5	junction_5	100.767747265129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAACATAA	3118308	False	NA	-33	True	NA	NA	NA	3118318	3153028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3138040_3140510_3152487
WTC11_00074858	chr6	+	595	2	Antisense	novelGene_ENSG00000216819.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	3768	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCGTTGTCAATGCAGT	NA	False	NA	NA	False	NA	NA	NA	3153987	3177301	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_3154539_3177257
WTC11_00074859	chr6	+	1152	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	-255	-268	-200	0	multi-exon	FALSE	canonical	3	44	junction_2	299.031027747215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	NA	False	NA	8	True	ATTAAA	-17	NA	3258696	3268049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
WTC11_00074860	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	50	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	3250129	True	NA	8	True	ATTAAA	-17	NA	3258946	3268049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3267590
WTC11_00074861	chr6	+	4617	2	FSM	ENSG00000180822.12	ENST00000473000.2	4603	2	-14	0	0	0	multi-exon	FALSE	canonical	3	690	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGATTTGTGTGTGCATT	3250129	True	NA	9	True	ATTAAA	-18	NA	3258946	3268050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683
WTC11_00074862	chr6	+	778	4	FSM	ENSG00000180822.12	ENST00000324987.4	778	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	309.134634459198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTGAGTGATAGA	3250159	True	NA	NA	False	NA	NA	NA	3258976	3267920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3264173_3264326_3267590
WTC11_00074863	chr6	+	1584	1	FSM	ENSG00000270504.1	ENST00000603791.1	2761	1	-523	1700	-523	-1700	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCTGCGAGTGTCGGGG	3750545	False	NA	NA	False	NA	NA	NA	3750587	3752171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3750600_3752200
WTC11_00074864	chr6	+	1950	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	-21	6	-8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGGTTTTGGTTAAT	3849121	True	NA	5	True	AATAAA	-15	NA	3849364	3851314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3849400_3851300
WTC11_00074865	chr6	+	959	1	FSM	ENSG00000216657.1	ENST00000405027.1	1038	1	104	-25	104	25	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCAAGAAATACTTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	3978165	3979124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3978200_3979100
WTC11_00074866	chr6	+	1477	1	FSM	ENSG00000279926.1	ENST00000623656.1	1458	1	99	-118	99	118	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGTAGAGTTGACCTGT	NA	False	NA	NA	False	AATACA	-10	NA	3982771	3984248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3982800_3984200
WTC11_00074867	chr6	+	6791	16	FSM	ENSG00000112739.17	ENST00000480058.5	6775	16	-16	0	-16	0	multi-exon	FALSE	canonical	3	18	junction_15	80.0836784591939	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	4021213	False	NA	5	True	AATAAA	-18	NA	4021250	4064982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4063073
WTC11_00074868	chr6	+	5138	18	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_15	86.5821209478035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	4010677	True	NA	5	True	AATAAA	-18	NA	4021299	4064982	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4062556_4062634_4063073_4063120_4064800
WTC11_00074869	chr6	+	5578	17	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_15	75.3893798472305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	4010677	True	NA	5	True	AATAAA	-18	NA	4021299	4064982	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4062556_4063120_4064800
WTC11_00074870	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	31.5681963439181	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010677	True	NA	6	True	AATAAA	-19	NA	4021299	4064983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
WTC11_00074876	chr6	+	3246	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	89.2910347621131	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4765004	True	NA	38	True	AATAAA	-20	NA	4772965	4955544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_4773179_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
WTC11_00074877	chr6	+	3307	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	93.2892753154878	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4765004	True	NA	38	True	AATAAA	-20	NA	4772965	4955544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_4773174_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
WTC11_00074878	chr6	+	3237	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4765079	True	NA	38	True	AATAAA	-20	NA	4773040	4955544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
WTC11_00074879	chr6	+	3517	7	FSM	ENSG00000153046.18	ENST00000397588.8	3503	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	42	junction_1	80.987653380006	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4775967	True	NA	38	True	AATAAA	-20	NA	4776389	4955544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4776808_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
WTC11_00074880	chr6	+	1948	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	-97	-159	-97	5	multi-exon	TRUE	canonical	2	9	junction_1	39.279624347604	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCATTTGTCTTTTATT	5260934	False	NA	14	True	AATAAA	-25	NA	5260946	5771588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
WTC11_00074881	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.3218700722617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260093	True	NA	9	True	AATAAA	-20	NA	5261512	5771583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
WTC11_00074883	chr6	+	9021	15	NNC	ENSG00000124782.21	novel	8625	13	NA	NA	-38	1488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	22.9272362762132	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACGAACACTGAAAG	7107537	False	NA	NA	False	NA	NA	NA	7107558	7253468	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_7108061_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7240437_7240603_7246423_7247222_7248510_7249063_7249082_7251978_7253451
WTC11_00074889	chr6	+	2513	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	-15	0	0	0	multi-exon	TRUE	canonical	3	327	junction_3	39.9107891897667	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	7384028	True	NA	10	True	CATAAA	-17	NA	7389792	7418037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
WTC11_00074892	chr6	+	9885	24	FSM	ENSG00000096696.15	ENST00000379802.8	9697	24	-330	142	-276	0	multi-exon	TRUE	canonical	3	125	junction_2	35.5429397645686	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	7541146	False	NA	19	True	AATAAA	-15	NA	7541340	7586572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7581570_7582641
WTC11_00074893	chr6	+	7812	24	FSM	ENSG00000096696.15	ENST00000418664.2	7812	24	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_23	40.1124600566438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	7539992	True	NA	19	True	AATAAA	-15	NA	7541616	7586572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7579773_7582641
WTC11_00074894	chr6	+	976	4	FSM	ENSG00000096696.15	ENST00000683563.1	1910	4	-3	937	0	-937	multi-exon	FALSE	canonical	3	125	junction_2	8.98146239020499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGTTGCTTACCTTAG	7541992	False	NA	NA	False	NA	NA	NA	7542020	7559884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225
WTC11_00074895	chr6	+	4179	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	92	junction_8	12.9801531192818	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	7585782	True	NA	9	True	ATTAAA	-22	NA	7590192	7611967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
WTC11_00074896	chr6	+	2610	5	FSM	ENSG00000168566.13	ENST00000496946.1	2610	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	15.0748134316813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATAACTACATCTTAT	7599656	False	NA	12	True	ATTAAA	-16	NA	7599672	7609206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
WTC11_00074897	chr6	+	4597	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	-18	0	-18	0	multi-exon	TRUE	canonical	3	133	junction_1	85.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10553680	True	NA	14	True	AATAAA	-19	NA	10555790	10629368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10557343_10621350_10621444_10626416
WTC11_00074898	chr6	+	4224	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	186	junction_1	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10582120	True	NA	14	True	AATAAA	-19	NA	10585735	10629368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10586915_10621350_10621444_10626416
WTC11_00074899	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	66.3829146544854	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686696	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
WTC11_00074900	chr6	+	1575	10	NNC	ENSG00000111845.5	novel	1523	10	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_1	218.353829968078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686647	True	NA	29	True	TATAAA	-23	NA	10694922	10709782	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_10695070_10697320_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
WTC11_00074901	chr6	+	1150	6	FSM	ENSG00000111843.14	ENST00000541412.5	1177	6	27	0	27	0	multi-exon	FALSE	canonical	3	18	junction_1	411.169356834869	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	10722919	False	NA	NA	False	AATAAA	-8	NA	10722941	10731119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724555_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
WTC11_00074902	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	97.5512173168536	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	10712726	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
WTC11_00074903	chr6	+	915	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	-16	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	433.327459896093	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	10712765	True	NA	NA	False	AATAAA	-18	NA	10723108	10731129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
WTC11_00074904	chr6	+	1585	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	-798	0	-746	0	multi-exon	FALSE	canonical	3	109	junction_3	347.737329028679	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	NA	False	NA	NA	False	NA	NA	NA	10747012	10756947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
WTC11_00074906	chr6	+	746	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	-16	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	378.465615640605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	10738110	True	NA	NA	False	AATAAA	-10	NA	10747800	10756973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
WTC11_00074907	chr6	+	933	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	-4	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	94.3071577347128	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738110	True	NA	NA	False	AATAAA	-18	NA	10747800	10756981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
WTC11_00074909	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.49030288683336	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	10886268	True	NA	117	True	AATAAA	-25	NA	10887051	10974309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
WTC11_00074910	chr6	+	621	3	FSM	ENSG00000153157.13	ENST00000474197.1	728	3	107	0	107	0	multi-exon	FALSE	canonical	3	25	junction_2	4.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGAAAACAGGTACATG	NA	False	NA	NA	False	NA	NA	NA	10930060	10935174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10930515_10931439_10931490_10935057
WTC11_00074911	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	11092653	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_11094390_11134402
WTC11_00074912	chr6	+	9138	3	FSM	ENSG00000205269.6	ENST00000379426.2	8891	3	-248	1	-248	-1	multi-exon	FALSE	canonical	3	35	junction_1	12	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGTGTTTGACTCTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	11537500	11583523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_11538375_11565665_11565837_11575430
WTC11_00074913	chr6	+	8655	7	ISM	ENSG00000095951.17	ENST00000379388.7	9053	9	76872	0	-36562	0	3prime_fragment	FALSE	canonical	2	9	junction_1	6.0736223860962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	NA	False	NA	7	True	AGTAAA	-20	NA	12089183	12164999	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
WTC11_00074914	chr6	+	727	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	-42	-70	-42	70	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACAGAAAATGCTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	12514067	12514794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12514100_12514800
WTC11_00074915	chr6	+	809	1	FSM	ENSG00000218265.1	ENST00000406274.1	780	1	16	-45	16	45	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAATGTGGCATGAT	NA	False	NA	NA	False	NA	NA	NA	13521281	13522090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13521300_13522100
WTC11_00074916	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.9184185719581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
WTC11_00074918	chr6	+	2360	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	-21	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	62.1880858741557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	13572661	True	NA	27	True	AATAAA	-24	NA	13574579	13605739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
WTC11_00074919	chr6	+	4585	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	-21	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	58.8049716551077	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	13572661	True	NA	NA	False	NA	NA	NA	13574579	13615158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
WTC11_00074921	chr6	+	1697	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	1659	junction_7	116.960834191168	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	13583539	True	NA	64	True	AATACA	-22	NA	13615320	13621712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
WTC11_00074923	chr6	+	3395	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	-70	304	-14	-2	multi-exon	FALSE	canonical	3	14	junction_1	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTTTGATTTCTCTG	13924262	True	NA	6	True	ATTAAA	-19	NA	13924881	13980006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925024_13974209_13974365_13976908
WTC11_00074924	chr6	+	3521	3	NIC	ENSG00000180537.13	novel	3274	2	NA	NA	-92	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	7	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTTCTCTGAC	13924481	False	NA	8	True	ATTAAA	-21	NA	13925100	13980008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_13925367_13974209_13974365_13976908
WTC11_00074925	chr6	+	3274	2	FSM	ENSG00000180537.13	ENST00000537388.1	3274	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTTCTCTGAC	13924573	False	NA	8	True	ATTAAA	-21	NA	13925192	13980008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925367_13976908
WTC11_00074926	chr6	+	2325	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	3	0	-3	multi-exon	FALSE	canonical	3	68	junction_4	11.6270159542335	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGATGTTGTAAACCAGT	14116343	True	NA	NA	False	AATAAA	-42	NA	14117771	14136903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
WTC11_00074927	chr6	+	6605	18	FSM	ENSG00000008083.14	ENST00000341776.7	6003	18	-604	2	-604	0	multi-exon	TRUE	canonical	3	288	junction_2	133.769827621953	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	15245451	False	NA	33	True	AATAAA	-35	NA	15245464	15522040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
WTC11_00074929	chr6	+	609	1	FSM	ENSG00000214027.3	ENST00000448802.1	534	1	34	-109	34	109	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGTCTTCACTTGAAAA	NA	False	NA	NA	False	CATAAA	-22	NA	15934815	15935424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_15934800_15935400
WTC11_00074930	chr6	+	3076	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_5	49.5098194525311	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	16126073	True	NA	15	True	AATAAA	-15	NA	16129081	16148248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
WTC11_00074931	chr6	+	486	1	FSM	ENSG00000218073.1	ENST00000407522.1	486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTTACATACATCACCT	NA	False	NA	NA	False	NA	NA	NA	16160925	16161411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16160900_16161400
WTC11_00074932	chr6	+	276	2	FSM	ENSG00000137198.10	ENST00000540478.1	793	2	517	0	517	0	multi-exon	FALSE	canonical	3	7	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCTCAGCAGGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	16290461	16295121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16290622_16295005
WTC11_00074933	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	12.4105130165249	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	17391304	True	NA	13	True	AATAAA	-22	NA	17393594	17557780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
WTC11_00074937	chr6	+	4726	5	FSM	ENSG00000137414.7	ENST00000259963.4	4726	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5.1720402163943	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTATTTTGTCTAT	17598818	True	NA	13	True	AATAAA	-15	NA	17600301	17611715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17601122_17602589_17602711_17604905_17605030_17605873_17606014_17608194
WTC11_00074938	chr6	+	380	1	FSM	ENSG00000206881.1	ENST00000384154.1	102	1	-306	28	-306	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTGTGAAGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	17619226	17619606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17619200_17619600
WTC11_00074939	chr6	+	748	1	FSM	ENSG00000272269.1	ENST00000606771.1	1088	1	-84	424	-84	-424	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCGTCACTCATCGG	17706113	True	NA	NA	False	NA	NA	NA	17706172	17706920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17706200_17706900
WTC11_00074940	chr6	+	667	1	FSM	ENSG00000220920.1	ENST00000407932.1	359	1	-216	-92	-216	92	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGGTGGCTCACACCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	17953355	17954022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17953400_17954000
WTC11_00074941	chr6	+	4526	22	FSM	ENSG00000165097.16	ENST00000650836.2	4538	22	12	0	-10	0	multi-exon	FALSE	canonical	2	4	junction_21	7.59430506285829	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTACTGTAGTGGTGAT	18154141	True	NA	18	True	AATAAA	-21	NA	18155433	18223854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208131_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18221908
WTC11_00074942	chr6	+	5142	8	FSM	ENSG00000137393.10	ENST00000259939.4	5032	8	56	-166	56	166	multi-exon	FALSE	canonical	3	8	junction_1	4.4629998148038	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATAGGGTCAGGGGGTC	18386889	True	NA	NA	False	NA	NA	NA	18387405	18469036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_18387631_18399498_18399700_18427580_18427686_18439683_18439745_18457154_18457360_18459606_18459752_18463290_18463381_18464926
WTC11_00074943	chr6	+	1056	2	ISM	ENSG00000172201.12	ENST00000378700.8	3873	3	0	3384	0	-3384	5prime_fragment	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTAGAACTCGAGGTT	19835840	True	NA	NA	False	AGTAAA	-44	NA	19837369	19838813	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_19838196_19838583
WTC11_00074944	chr6	+	3873	3	FSM	ENSG00000172201.12	ENST00000378700.8	3873	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGAGTTTGTGGTTT	19835840	True	NA	6	True	AATAAA	-17	NA	19837369	19842197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_19838196_19838583_19838643_19839209
WTC11_00074945	chr6	+	5036	7	FSM	ENSG00000112242.16	ENST00000346618.8	5036	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	24.1108550933668	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20397907	True	NA	9	True	AATAAA	-45	NA	20401878	20493714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20402626_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
WTC11_00074946	chr6	+	4587	7	NIC	ENSG00000112242.16	novel	4425	7	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	12.6721479368469	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20403522	False	NA	9	True	AATAAA	-45	NA	20403534	20493714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_20403833_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
WTC11_00074947	chr6	+	4425	7	FSM	ENSG00000112242.16	ENST00000535432.2	4425	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	28.5331191580747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20403376	False	NA	9	True	AATAAA	-45	NA	20403678	20493714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20403833_20479845_20479958_20481223_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
WTC11_00074948	chr6	+	3282	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	30	junction_13	16.9241444884717	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	20530319	True	NA	23	True	AATAAA	-23	NA	20534446	21232404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
WTC11_00074949	chr6	+	4881	1	FSM	ENSG00000124766.7	ENST00000244745.4	4869	1	-12	0	-12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCGTTATT	21593613	False	NA	23	True	AATAAA	-24	NA	21593738	21598619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21593700_21598600
WTC11_00074950	chr6	+	1341	1	Genic_Genomic	ENSG00000272168.9	novel	NA	NA	NA	NA	-317	-4507	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCATTTCCCCCACCTC	NA	False	NA	NA	False	NA	NA	NA	21663866	21665207	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_21663900_21665200
WTC11_00074951	chr6	+	992	3	NNC	ENSG00000272168.9	novel	1278	2	NA	NA	386	-281	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	51.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAACCTTTATGGC	21665877	False	NA	NA	False	NA	NA	NA	21665894	21669433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_21666020_21666565_21666646_21668646
WTC11_00074952	chr6	+	1460	5	FSM	ENSG00000272168.9	ENST00000669942.1	1442	5	-18	0	5	0	multi-exon	TRUE	canonical	2	5	junction_3	49.3222819828929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTCTGCATGCAGAAAT	21664066	True	NA	8	True	AATAAA	-25	NA	21666393	21755639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21666646_21668646_21668900_21742916_21743043_21754699_21754817_21754927
WTC11_00074954	chr6	+	989	2	FSM	ENSG00000272168.9	ENST00000691572.1	1278	2	8	281	0	-281	multi-exon	FALSE	canonical	3	123	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAACCTTTATGGC	21664116	True	NA	NA	False	NA	NA	NA	21666443	21669433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21666646_21668646
WTC11_00074956	chr6	+	3020	15	NIC	ENSG00000272168.9	novel	1889	12	NA	NA	26	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	29.4702374941089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTATGGTAAATAATTT	21664142	True	NA	NA	False	AATAAA	-6	NA	21666469	22195123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_21666646_21668646_21668900_21742916_21743043_21758392_21758535_21783631_21783709_21802656_21802741_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110921_22173997_22174063_22181322_22181476_22191566_22191657_22194044
WTC11_00074957	chr6	+	380	1	FSM	ENSG00000222515.1	ENST00000410583.1	375	1	1	-6	1	6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTATAAAGTCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	22085544	22085924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_22085500_22085900
WTC11_00074958	chr6	+	264	1	FSM	ENSG00000278128.2	ENST00000672736.1	3508	1	2425	819	2120	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCCATACGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	23856563	23856827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_23856600_23856800
WTC11_00074959	chr6	+	3836	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	35	junction_2	240.070822883582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384632	True	NA	9	True	AATAAA	-22	NA	24402892	24426194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
WTC11_00074960	chr6	+	1758	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	-18	0	0	0	multi-exon	TRUE	canonical	3	730	junction_6	29.3030146344479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	24384675	True	NA	8	True	AATAAA	-15	NA	24402935	24423476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
WTC11_00074961	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	28.318898283655	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	24384675	True	NA	5	True	AATAAA	-18	NA	24402935	24426190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
WTC11_00074962	chr6	+	1528	11	FSM	ENSG00000112294.14	ENST00000348925.2	2266	11	243	495	-22	0	multi-exon	FALSE	canonical	2	6	junction_4	10.7126093926737	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAATTTTTCAGAACT	24494976	False	NA	5	True	AATAAA	-17	NA	24495211	24533808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24511829_24511869_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
WTC11_00074963	chr6	+	4837	10	FSM	ENSG00000112294.14	ENST00000357578.8	5131	10	243	51	-22	-14	multi-exon	FALSE	canonical	3	17	junction_7	5.96284793999944	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTGTGTGATTAATAAA	24494976	False	NA	-28	True	NA	NA	NA	24495211	24537156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
WTC11_00074964	chr6	+	584	5	FSM	ENSG00000112294.14	ENST00000672619.1	871	5	0	287	0	-287	multi-exon	FALSE	canonical	1	1	junction_4	11.4673449411797	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGACTGGCTTGGTTTT	24504664	False	NA	NA	False	NA	NA	NA	24504899	24523655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24504986_24515166_24515311_24520400_24520545_24522766_24522926_24523604
WTC11_00074965	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	49	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	24657928	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24667345_24697882_24698068_24701458
WTC11_00074966	chr6	+	263	1	FSM	ENSG00000272402.1	ENST00000606921.1	405	1	37	105	37	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCACTATCTAGCAC	24706756	False	NA	NA	False	AAAAAG	-42	NA	24706783	24707046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24706800_24707000
WTC11_00074967	chr6	+	1146	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	633	junction_1	232.733514752149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	24757599	True	NA	31	True	AATATA	-15	NA	24774917	24786095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
WTC11_00074968	chr6	+	1282	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	-19	0	-13	0	multi-exon	FALSE	canonical	3	677	junction_1	216.53021344222	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	24757599	True	NA	35	True	AATATA	-19	NA	24774917	24786099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
WTC11_00074969	chr6	+	1210	7	NNC	ENSG00000112312.10	novel	1263	7	NA	NA	10	-23	at_least_one_novel_splicesite	TRUE	canonical	2	14	junction_6	466.734280816064	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAATATAAGGAGTATG	24757640	True	NA	6	True	AATAAA	-39	NA	24774958	24786070	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785639
WTC11_00074971	chr6	+	722	2	NNC	ENSG00000214975.4	novel	499	2	NA	NA	-20	205	at_least_one_novel_splicesite	FALSE	canonical	3	1029	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAAAAAGAAACGAG	NA	False	NA	NA	False	AATAAA	-14	NA	24976398	24977187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_24976488_24976554
WTC11_00074972	chr6	+	1393	1	FSM	ENSG00000219682.4	ENST00000405676.2	1401	1	11	-3	11	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGAAGTTGGCTGCGGAAT	NA	False	NA	NA	False	AAAAAG	-13	NA	25140013	25141406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25140000_25141400
WTC11_00074973	chr6	+	5861	37	FSM	ENSG00000079691.18	ENST00000329474.7	5485	37	-376	0	-80	0	multi-exon	FALSE	canonical	3	51	junction_28	7.36289286612434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	NA	False	NA	18	True	AATAAA	-19	NA	25278997	25620530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
WTC11_00074974	chr6	+	3742	2	FSM	ENSG00000272462.4	ENST00000606723.2	4130	2	106	282	-6	-278	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGATCTCTATTCTACTA	25992547	True	NA	NA	False	NA	NA	NA	25992767	26001493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25992919_25997902
WTC11_00074975	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	NA	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26124750_26138053
WTC11_00074976	chr6	+	491	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	139	157	139	-157	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCAAAGCAGTTAAACCC	26123208	False	NA	NA	False	AAAAAG	-44	NA	26156467	26156958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26156500_26157000
WTC11_00074977	chr6	+	513	1	FSM	ENSG00000158373.9	ENST00000377777.6	486	1	7	-34	7	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGGGGTTATTGGACT	26132261	False	NA	16	True	AATAAA	-22	NA	26158128	26158641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26158100_26158600
WTC11_00074979	chr6	+	810	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	-21	0	3	0	multi-exon	FALSE	canonical	2	12	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	26132257	True	NA	5	True	AATAAA	-20	NA	26158124	26171349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26158560_26170974
WTC11_00074980	chr6	+	1287	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	0	-875	0	875	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCAAACCTACTGAAT	26104561	True	NA	NA	False	NA	NA	NA	26204609	26205896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26204600_26205900
WTC11_00074981	chr6	+	559	1	FSM	ENSG00000277075.2	ENST00000303910.4	509	1	-54	4	-54	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATGTTCACTGTCCTA	26145125	True	NA	5	True	AATACA	-17	NA	26216920	26217479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26216900_26217500
WTC11_00074982	chr6	+	392	1	FSM	ENSG00000274618.2	ENST00000244537.6	401	1	11	-2	11	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTCGTCACACGAAGGG	26046199	True	NA	NA	False	CATAAA	-20	NA	26240403	26240795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26240400_26240800
WTC11_00074983	chr6	+	2110	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	-11	-1637	-11	1637	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGAGTTAGTATTTG	26199791	True	NA	3	True	AATAAA	-19	NA	26251602	26253712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26251600_26253700
WTC11_00074984	chr6	+	520	1	FSM	ENSG00000278588.2	ENST00000377733.4	482	1	24	-62	24	62	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATGGGATAGTAAGGG	26222110	True	NA	NA	False	NA	NA	NA	26272954	26273474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26273000_26273500
WTC11_00074985	chr6	+	556	3	FSM	ENSG00000124508.17	ENST00000482636.1	708	3	0	152	0	-152	multi-exon	FALSE	canonical	3	21	junction_1	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGAAAGTTTCTCCCTT	26381882	True	NA	NA	False	NA	NA	NA	26383142	26385407	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383182_26383791_26383916_26385014
WTC11_00074987	chr6	+	886	4	FSM	ENSG00000124508.17	ENST00000493275.5	881	4	-5	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.931970208417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTAGTTCTCTGCCC	26381847	True	NA	NA	False	NA	NA	NA	26383107	26388289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383245_26383791_26383916_26385014_26385363_26388012
WTC11_00074988	chr6	+	3580	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	3	0	-3	multi-exon	FALSE	canonical	3	21	junction_1	9.72058619211657	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTAGCTTGAATGGTA	26381847	True	NA	3	True	AATAAA	-13	NA	26383107	26394871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
WTC11_00074989	chr6	+	1775	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	12	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_7	18.7834056158784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTAGCTTGAATGGTA	26381847	True	NA	3	True	AATAAA	-13	NA	26383107	26394871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
WTC11_00074993	chr6	+	2903	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	-13	0	-8	0	multi-exon	FALSE	canonical	3	26	junction_7	7.32343178170074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457193	True	NA	9	True	AATAAA	-18	NA	26457941	26469637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
WTC11_00074994	chr6	+	3132	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	-19	0	-8	0	multi-exon	FALSE	canonical	1	4	junction_7	13.5586405916625	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457193	True	NA	9	True	AATAAA	-18	NA	26457941	26469637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
WTC11_00074995	chr6	+	3020	9	FSM	ENSG00000112763.17	ENST00000377600.7	3024	9	4	0	4	0	multi-exon	FALSE	canonical	3	10	junction_4	13.2829778287852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457177	True	NA	9	True	AATAAA	-18	NA	26457925	26469637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26462796_26462898_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
WTC11_00074996	chr6	+	2807	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	38	0	-8	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5459043491057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCTAATGTGTGGCT	26457193	True	NA	25	True	AATAAA	-34	NA	26457941	26469653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
WTC11_00074997	chr6	+	5792	1	FSM	ENSG00000228223.3	ENST00000411553.3	5696	1	-140	44	-140	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTATTTTAAAAGCCTGT	NA	False	NA	-8	True	TTTAAA	-5	NA	26521568	26527360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26521600_26527400
WTC11_00074998	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	26533237	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26538502_26545126
WTC11_00074999	chr6	+	2960	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	734	junction_2	15.5	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	26589941	True	NA	11	True	ATTAAA	-20	NA	26596935	26600739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26597224_26597913_26598111_26598264
WTC11_00075000	chr6	+	962	1	FSM	ENSG00000261584.1	ENST00000562904.1	1724	1	481	281	481	-281	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCAAAGTATGAGACCCA	NA	False	NA	NA	False	NA	NA	NA	26686721	26687683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26686700_26687700
WTC11_00075001	chr6	+	1041	3	FSM	ENSG00000224843.8	ENST00000666341.1	1062	3	1	20	1	-11	multi-exon	FALSE	canonical	3	10	junction_2	1	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATGTGACCTTGA	27019887	False	NA	NA	False	AATAAA	-4	NA	27019905	27023911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27020656_27023253_27023398_27023764
WTC11_00075002	chr6	+	1377	2	FSM	ENSG00000224843.8	ENST00000664092.1	1418	2	0	41	0	2	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGATAGTTTGTTATG	27019907	False	NA	NA	False	AATAAA	-26	NA	27019958	27023933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27020656_27023253
WTC11_00075005	chr6	+	2323	1	FSM	ENSG00000196787.4	ENST00000359193.4	493	1	0	-1830	0	1830	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAATTTTTTCCTTAGG	27017879	True	NA	76	True	NA	NA	NA	27133042	27135365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27133000_27135400
WTC11_00075006	chr6	+	2378	1	FSM	ENSG00000276180.2	ENST00000615353.2	397	1	-1010	-971	-1010	971	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATTTATACTCCCATA	27138225	False	NA	NA	False	AATAAA	-30	NA	27138271	27140649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27138300_27140600
WTC11_00075007	chr6	+	547	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	-92	2	-92	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTACACTGTCTTAGAG	27146974	False	NA	NA	False	AAAACA	-18	NA	27147013	27147560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27147000_27147600
WTC11_00075009	chr6	+	800	3	FSM	ENSG00000112812.16	ENST00000495683.5	914	3	114	0	-9	0	multi-exon	FALSE	canonical	3	6	junction_1	45.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCTGTCTATTTCTC	27250540	True	NA	NA	False	NA	NA	NA	27251184	27255820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251265_27254985_27255132_27255246
WTC11_00075010	chr6	+	1758	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	-9	-794	-9	0	multi-exon	TRUE	canonical	3	45	junction_1	20.5836707124847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	27250540	True	NA	22	True	AATAAA	-19	NA	27251184	27256456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
WTC11_00075012	chr6	+	1999	5	FSM	ENSG00000112812.16	ENST00000484493.5	996	5	-23	-980	-23	-69	multi-exon	FALSE	canonical	2	5	junction_1	37.7979827504061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAATCTCCACTACACT	27250631	False	NA	-61	True	NA	NA	NA	27251275	27256551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251502_27252807_27252950_27254692_27254873_27254985_27255132_27255246
WTC11_00075015	chr6	+	4121	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	-233	-3139	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.675435561221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	27388439	True	NA	18	True	AATAAA	-29	NA	27388758	27403908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
WTC11_00075016	chr6	+	1725	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	45	-274	-1	274	multi-exon	FALSE	canonical	2	3	junction_2	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACTCTGTCTCAA	27693823	True	NA	NA	False	NA	NA	NA	27694071	27713980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
WTC11_00075028	chr6	+	1657	2	FSM	ENSG00000219891.3	ENST00000529104.2	1674	2	17	0	17	0	multi-exon	FALSE	canonical	2	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAAATTACCTTTTCTG	NA	False	NA	96	True	NA	NA	NA	28091153	28093664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28091485_28092338
WTC11_00075029	chr6	+	1300	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	45	junction_3	24.1430919496424	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123350	True	NA	8	True	ATTAAA	-19	NA	28124587	28130082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
WTC11_00075030	chr6	+	1336	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	30.2691628926573	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCTGAGTAAAATATC	28123371	True	NA	7	True	ATTAAA	-18	NA	28124608	28130081	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
WTC11_00075031	chr6	+	3761	3	ISM	ENSG00000196812.6	ENST00000340487.5	1279	4	23	3	23	-3	intron_retention	FALSE	canonical	3	71	junction_1	16.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	28123394	True	NA	5	True	ATTAAA	-16	NA	28124631	28130079	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_28124678_28125412_28125831_28126782
WTC11_00075033	chr6	+	7443	6	FSM	ENSG00000198315.11	ENST00000330236.7	7419	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	22	junction_5	5.49181208709839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGATTATTTGTGGT	28138929	True	NA	24	True	AATAAA	-15	NA	28141858	28159460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28142030_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
WTC11_00075036	chr6	+	2013	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	-15	0	-5	0	multi-exon	FALSE	canonical	3	5	junction_2	23.5513623102076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28266214	True	NA	18	True	AATAAA	-19	NA	28267137	28277530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
WTC11_00075037	chr6	+	2302	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	60	0	-25	0	multi-exon	FALSE	canonical	3	45	junction_1	6.94422221866655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	28266194	True	NA	11	True	AATAAA	-11	NA	28267117	28278201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
WTC11_00075038	chr6	+	2690	4	FSM	ENSG00000197062.12	ENST00000421553.7	2685	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8486610281492	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGCAGATTTATTTAAA	28266214	True	NA	14	True	AATAAA	-14	NA	28267137	28278204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267214_28271853_28272340_28272669_28272788_28276194
WTC11_00075039	chr6	+	1766	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	-136	691	70	0	multi-exon	FALSE	canonical	3	8	junction_1	22.553639765383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28266299	False	NA	18	True	AATAAA	-19	NA	28267222	28277530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
WTC11_00075041	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9.70251971855192	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
WTC11_00075043	chr6	+	4811	7	FSM	ENSG00000189298.14	ENST00000377255.3	4799	7	-12	0	-9	0	multi-exon	FALSE	canonical	1	4	junction_1	18.8591268797542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGTGGATTCTTAAA	28349194	True	NA	5	True	AATAAA	-15	NA	28349937	28369170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28350068_28350271_28350389_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
WTC11_00075044	chr6	+	336	3	FSM	ENSG00000227214.2	ENST00000438190.1	1032	3	0	696	0	-696	multi-exon	FALSE	canonical	1	1	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCCTTGCTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	28986202	28986788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28986233_28986312_28986507_28986676
WTC11_00075045	chr6	+	1706	1	FSM	ENSG00000204657.4	ENST00000383640.4	1514	1	-114	-78	-114	78	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAATGTAGTAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	29587340	29589046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29587300_29589000
WTC11_00075049	chr6	+	546	4	Fusion	ENSG00000206503.13_ENSG00000206341.7	novel	1096	7	NA	NA	2027	0	multi-exon	FALSE	canonical	3	41	junction_1	171.477889731203	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	NA	False	NA	13	True	AATAAA	-16	NA	29889778	29945870	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_29889824_29890263_29890297_29945233_29945282_29945450
WTC11_00075051	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	121.297744649861	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	29942301	True	NA	13	True	AATAAA	-16	NA	29942531	29945870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
WTC11_00075052	chr6	+	859	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	-8	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	13.1993265821489	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	30059839	True	NA	36	True	ATTAAA	-26	NA	30061256	30064907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
WTC11_00075053	chr6	+	745	5	FSM	ENSG00000066379.15	ENST00000359374.8	743	5	-2	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	108.137354785476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059839	True	NA	38	True	ATTAAA	-28	NA	30061256	30064909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061399_30061514_30061670_30061916_30062018_30062223_30062334_30064672
WTC11_00075054	chr6	+	736	5	FSM	ENSG00000066379.15	ENST00000376782.6	736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.516210707212	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059839	True	NA	38	True	ATTAAA	-28	NA	30061256	30064909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061390_30061514_30061670_30061916_30062018_30062223_30062334_30064672
WTC11_00075055	chr6	+	569	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	2	0	0	multi-exon	FALSE	canonical	1	3	junction_2	148.460993754813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	30059912	True	NA	36	True	ATTAAA	-26	NA	30061329	30064907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
WTC11_00075057	chr6	+	1696	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	-7	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	168.291413922398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067184	False	NA	15	True	AATAAA	-19	NA	30067197	30070333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
WTC11_00075058	chr6	+	589	3	ISM	ENSG00000243753.6	ENST00000420110.1	1011	5	771	16	771	-16	3prime_fragment	FALSE	canonical	3	9	junction_1	58.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAAGCTCAGGTAG	30260272	False	NA	NA	False	NA	NA	NA	30260395	30261687	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30260608_30261203_30261480_30261586
WTC11_00075062	chr6	+	3258	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	366	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.8449063390346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	NA	False	NA	23	True	NA	NA	NA	30326834	30343729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
WTC11_00075063	chr6	+	3535	8	FSM	ENSG00000204599.15	ENST00000376659.9	3535	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	32.9359303831557	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	30326858	False	NA	23	True	NA	NA	NA	30327258	30343729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30327697_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
WTC11_00075066	chr6	+	645	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	-24	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	51.6333225737023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
WTC11_00075067	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	484.013106744022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
WTC11_00075068	chr6	+	1503	3	FSM	ENSG00000241370.6	ENST00000498414.5	1492	3	-11	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	18	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30346558_30346712
WTC11_00075069	chr6	+	528	5	FSM	ENSG00000241370.6	ENST00000442966.7	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	53.5397048927242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336936	True	NA	21	True	AATAAA	-22	NA	30345155	30346857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346558_30346712
WTC11_00075070	chr6	+	597	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	-3	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_3	40.5490101262931	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336936	True	NA	21	True	AATAAA	-22	NA	30345155	30346857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
WTC11_00075071	chr6	+	1931	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	-1412	3	-1374	-3	multi-exon	FALSE	canonical	3	122	junction_4	454.514301205144	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	NA	False	NA	18	True	AATAAA	-19	NA	30343756	30346854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
WTC11_00075075	chr6	+	1141	3	FSM	ENSG00000204592.9	ENST00000493699.1	907	3	-19	-215	-16	215	multi-exon	TRUE	canonical	3	192	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGTCAGGGCCCCTTAC	30485478	True	NA	NA	False	NA	NA	NA	30489492	30491498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30489996_30490239_30490516_30491136
WTC11_00075076	chr6	+	2564	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	192	junction_2	17.3075422983208	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	30485478	True	NA	22	True	AATAAA	-19	NA	30489492	30494194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
WTC11_00075077	chr6	+	2007	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	-2	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.836157786453	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556668	True	NA	78	True	AATAAA	-28	NA	30557313	30563723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
WTC11_00075078	chr6	+	1967	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	-23	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_1	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557290	30563723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
WTC11_00075082	chr6	+	3440	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	-14	0	-14	0	multi-exon	FALSE	canonical	3	298	junction_3	92.285101346618	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	3	True	AAAAAG	-20	NA	30571409	30591522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
WTC11_00075084	chr6	+	3423	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	-18	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	92.1285334012578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	3	True	AAAAAG	-20	NA	30571423	30591522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
WTC11_00075086	chr6	+	1470	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	-72	0	-72	0	multi-exon	FALSE	canonical	3	744	junction_3	85.904339561838	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	NA	False	NA	25	True	AATAAA	-19	NA	30617767	30626392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
WTC11_00075087	chr6	+	2670	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	-24	0	-4	0	multi-exon	FALSE	canonical	3	105	junction_8	45.7815532423699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626840	False	NA	NA	False	AAAAAG	-17	NA	30626851	30644679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
WTC11_00075088	chr6	+	3304	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	-1	-692	-1	692	multi-exon	FALSE	canonical	3	56	junction_7	55.578772926361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCTAGTTTGTGTAT	30626829	False	NA	NA	False	NA	NA	NA	30626840	30645371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
WTC11_00075091	chr6	+	1593	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	-68	2	-4	0	multi-exon	FALSE	canonical	3	48	junction_9	59.1236839176992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626840	False	NA	13	True	AATAAA	-21	NA	30626851	30646821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
WTC11_00075092	chr6	+	1760	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	-22	0	-4	0	multi-exon	FALSE	canonical	1	4	junction_1	62.2561911245246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626840	False	NA	13	True	AATAAA	-21	NA	30626851	30646821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
WTC11_00075093	chr6	+	1491	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	-15	0	-1	0	multi-exon	FALSE	canonical	3	101	junction_10	48.5771865751358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626829	False	NA	15	True	AATAAA	-23	NA	30626840	30646823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
WTC11_00075095	chr6	+	1213	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	-18	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	58.1546811714135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626851	True	NA	15	True	AATAAA	-23	NA	30626874	30646823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
WTC11_00075096	chr6	+	1125	11	NIC	ENSG00000137343.18	novel	1195	12	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	65.7735509152425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGCTGTTGAAAAATT	30626864	True	NA	9	True	AATAAA	-17	NA	30626887	30646817	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30645894_30645975_30646066_30646110_30646468
WTC11_00075101	chr6	+	1478	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	-79	3	-45	0	multi-exon	FALSE	canonical	3	51	junction_1	25.822470834527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGTGTCAGGTTCTG	NA	False	NA	9	True	ATTAAA	-19	NA	30646993	30653207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
WTC11_00075102	chr6	+	692	3	FSM	ENSG00000204564.12	ENST00000465699.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30651053	30653109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30651083_30651265_30651467_30652647
WTC11_00075104	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_2	550.255900064284	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	NA	False	NA	32	True	AATAAA	-16	NA	30720351	30725422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
WTC11_00075105	chr6	+	2637	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	867	junction_1	4755.32256178975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721017	False	NA	36	True	AATAAA	-20	NA	30721568	30725426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
WTC11_00075106	chr6	+	3209	3	FSM	ENSG00000196230.14	ENST00000680530.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_1	143.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTGAAAAAAGCTGCGA	30721066	False	NA	19	True	AATAAA	-3	NA	30721617	30725409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30722646_30722917_30723029_30723339
WTC11_00075107	chr6	+	3431	2	FSM	ENSG00000196230.14	ENST00000681421.1	3412	2	-19	0	0	0	multi-exon	FALSE	canonical	3	11095	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATTGAAAAAAGCTGCG	30721115	False	NA	18	True	AATAAA	-2	NA	30721666	30725408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30723029_30723339
WTC11_00075108	chr6	+	2903	4	FSM	ENSG00000196230.14	ENST00000396389.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_1	5057.40660374026	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721115	False	NA	36	True	AATAAA	-20	NA	30721666	30725426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30722263_30722536_30722646_30722917_30723029_30723339
WTC11_00075109	chr6	+	2829	4	FSM	ENSG00000196230.14	ENST00000396384.1	2823	4	-13	7	0	-3	multi-exon	FALSE	canonical	2	859	junction_1	4759.09265395084	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCGAGATGTGTGCT	30721134	False	NA	29	True	AATAAA	-13	NA	30721685	30725419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30722215_30722536_30722646_30722917_30723029_30723339
WTC11_00075115	chr6	+	3569	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	19	0	19	0	multi-exon	FALSE	canonical	3	143	junction_1	136.195573991962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	30882349	False	NA	NA	False	NA	NA	NA	30882631	30899840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00075121	chr6	+	4953	19	FSM	ENSG00000204580.14	ENST00000376570.8	3820	19	-1129	-4	0	0	multi-exon	FALSE	canonical	3	27	junction_1	207.946166169736	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30880749	True	NA	20	True	AATAAA	-18	NA	30882954	30900156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884146_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00075122	chr6	+	5719	18	FSM	ENSG00000204580.14	ENST00000376569.7	3783	18	-1114	-822	0	822	multi-exon	FALSE	canonical	3	27	junction_1	183.989205340044	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	30880749	True	NA	14	True	AATAAA	-22	NA	30882954	30900978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00075123	chr6	+	6222	18	FSM	ENSG00000204580.14	ENST00000376568.8	3836	18	-1564	-822	0	822	multi-exon	FALSE	canonical	3	121	junction_1	161.49749052653	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	30880749	True	NA	14	True	AATAAA	-22	NA	30882954	30900978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00075124	chr6	+	5559	19	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	0	822	intron_retention	FALSE	canonical	3	11	junction_1	209.973139081651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	30880749	True	NA	14	True	AATAAA	-22	NA	30882954	30900978	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883930_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00075137	chr6	+	705	3	FSM	ENSG00000213780.11	ENST00000483318.5	1082	3	377	0	105	0	multi-exon	FALSE	canonical	3	33	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30912317	False	NA	35	True	AATAAA	-17	NA	30912327	30914106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30912459_30913109_30913388_30913810
WTC11_00075138	chr6	+	4064	29	FSM	ENSG00000137411.19	ENST00000672801.1	4064	29	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	35.6898487825663	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	30914194	False	NA	8	True	GATAAA	-14	NA	30914204	30926456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920094_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00075139	chr6	+	4073	29	FSM	ENSG00000137411.19	ENST00000321897.9	4073	29	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	22.7004674949613	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30914194	False	NA	11	True	GATAAA	-17	NA	30914204	30926459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00075141	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	32.4565015774841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912686	True	NA	11	True	GATAAA	-17	NA	30914237	30926459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00075142	chr6	+	3564	30	NIC	ENSG00000137411.19	novel	3575	30	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	41.8194693207449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATGTCTGTTTATGGC	30912687	True	NA	7	True	GATAAA	-13	NA	30914238	30926455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920094_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00075149	chr6	+	3039	4	FSM	ENSG00000137310.12	ENST00000376255.4	3039	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.0345184328831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31158546	31164215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31158723_31159142_31159708_31161446_31162006_31162476
WTC11_00075151	chr6	+	805	3	FSM	ENSG00000137310.12	ENST00000542218.1	805	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCCCTGCCCTAT	NA	False	NA	NA	False	NA	NA	NA	31161448	31167159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31162006_31166279_31166366_31166997
WTC11_00075156	chr6	+	1227	6	NNC	ENSG00000204520.14	novel	1370	6	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	26.7177843392748	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTCATTGTTTTTGT	31403503	True	NA	9	True	NA	NA	NA	31403599	31415314	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31403703_31410542_31410798_31411208_31411360_31411946_31412226_31412324_31412461_31415011
WTC11_00075157	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5935617870109	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	31494443	True	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
WTC11_00075158	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	19.1039262980153	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	31497707	False	NA	NA	False	AATAGA	-1	NA	31498144	31511124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
WTC11_00075159	chr6	+	907	3	FSM	ENSG00000204516.10	ENST00000494577.1	907	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	6	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAAAGGGGACAGTTT	NA	False	NA	NA	False	AAGAAA	-23	NA	31505934	31507531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31506431_31507021_31507301_31507399
WTC11_00075160	chr6	+	1425	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	26	junction_1	15.1730755689881	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	NA	False	NA	31	True	NA	NA	NA	31546855	31558829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
WTC11_00075161	chr6	+	1471	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	-70	0	-65	0	multi-exon	FALSE	canonical	2	11	junction_3	20.8219969156552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	NA	False	NA	31	True	NA	NA	NA	31547542	31558829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
WTC11_00075163	chr6	+	530	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	76	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615883	False	NA	21	True	AATAAA	-22	NA	31615984	31617021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31616146_31616343_31616507_31616815
WTC11_00075165	chr6	+	6927	31	FSM	ENSG00000204469.13	ENST00000376033.3	6903	31	-24	0	-24	0	multi-exon	FALSE	canonical	3	114	junction_1	208.764314213155	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	31620322	False	NA	29	True	AATAAA	-19	NA	31620690	31637771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31620859_31622689_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
WTC11_00075170	chr6	+	1118	5	FSM	ENSG00000204469.13	ENST00000492691.5	1118	5	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_1	76.0411073038787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	31636233	False	NA	29	True	AATAAA	-19	NA	31636246	31637771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233
WTC11_00075176	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	1079	junction_6	55.5930151487877	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	31648057	True	NA	14	True	AATAAA	-17	NA	31666072	31670067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
WTC11_00075177	chr6	+	1800	5	FSM	ENSG00000204435.15	ENST00000468255.5	1792	5	-8	0	-7	0	multi-exon	FALSE	canonical	3	1079	junction_4	36.5068486725436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCAGCTCCATCTTTT	31648057	True	NA	NA	False	GGGGCT	-2	NA	31666072	31670343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31669509_31669835
WTC11_00075179	chr6	+	2654	3	FSM	ENSG00000240053.8	ENST00000375864.4	2654	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	11	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCACATTGTTTGTGG	31670128	False	NA	17	True	AATAAA	-18	NA	31670166	31673546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31671009_31671155_31671285_31671863
WTC11_00075183	chr6	+	2724	25	FSM	ENSG00000204410.16	ENST00000375703.7	2708	25	-16	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	19.7715687429085	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	31738284	True	NA	NA	False	AATAAA	-17	NA	31740004	31762676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761184_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
WTC11_00075184	chr6	+	2936	25	FSM	ENSG00000204410.16	ENST00000375755.8	2936	25	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	19.9551145629942	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	31738227	True	NA	NA	False	AATAAA	-17	NA	31739947	31762676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740221_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
WTC11_00075191	chr6	+	621	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	-19	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	298.056295950204	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834607	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
WTC11_00075192	chr6	+	1053	4	FSM	ENSG00000204387.14	ENST00000375640.7	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	191.475556896667	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834607	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31835410_31835452_31837235_31837436_31839542
WTC11_00075194	chr6	+	972	5	FSM	ENSG00000204387.14	ENST00000375642.6	962	5	-10	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	276.508589378341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31835410_31835452_31836298_31836518_31837235_31837436_31839542
WTC11_00075195	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	289.443527403111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
WTC11_00075197	chr6	+	2101	2	FSM	ENSG00000204387.14	ENST00000395788.3	815	2	-1290	4	265	-1	multi-exon	FALSE	canonical	3	733	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGACGTGGTTTGGTCTC	31835534	False	NA	94	True	AATAAA	-15	NA	31835552	31839760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31837436_31839542
WTC11_00075198	chr6	+	3818	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	-23	0	-5	0	multi-exon	FALSE	canonical	3	150	junction_1	21.354220741676	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31956268	True	NA	7	True	GATAAA	-9	NA	31959151	31969751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
WTC11_00075202	chr6	+	1307	6	FSM	ENSG00000204351.12	ENST00000483553.5	1307	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	83.6741298132224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31967743	False	NA	7	True	GATAAA	-9	NA	31967758	31969751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31967863_31967955_31968083_31968327_31968539_31968622_31968797_31968870_31969090_31969279
WTC11_00075206	chr6	+	1990	6	FSM	ENSG00000204344.16	ENST00000473983.5	1894	6	141	-237	-54	0	multi-exon	FALSE	canonical	3	57	junction_1	14.6969384566991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972114	True	NA	NA	False	AATAAA	-17	NA	31972480	31981446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31980549_31980653_31980802_31981003
WTC11_00075209	chr6	+	885	6	FSM	ENSG00000221988.13	ENST00000414204.5	954	6	69	0	-13	0	multi-exon	FALSE	canonical	3	14	junction_1	52.6307894677631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGGATGCTGAACT	32153313	True	NA	NA	False	NA	NA	NA	32153509	32155978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870
WTC11_00075212	chr6	+	2884	16	FSM	ENSG00000258388.7	ENST00000428388.6	2878	16	-6	0	-6	0	multi-exon	FALSE	canonical	2	2	junction_9	53.3972117457665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	32153642	False	NA	14	True	AATAAA	-17	NA	32153838	32168281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32164578_32164658_32166137_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
WTC11_00075214	chr6	+	1945	9	FSM	ENSG00000221988.13	ENST00000375137.6	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	38.7183338355358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153898	False	NA	18	True	AATAAA	-18	NA	32154094	32163678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154395_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
WTC11_00075215	chr6	+	1891	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	-43	-94	0	94	multi-exon	FALSE	canonical	3	13	junction_1	41.2293508922952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGACCCCCTTGGTGTTT	32153898	False	NA	112	True	NA	NA	NA	32154094	32163772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
WTC11_00075223	chr6	+	2026	6	FSM	ENSG00000241404.7	ENST00000466239.5	2441	6	415	0	415	0	multi-exon	FALSE	canonical	3	30	junction_3	4.40908153700972	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	NA	False	NA	14	True	AATAAA	-17	NA	32165650	32168281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167657_32167909
WTC11_00075227	chr6	+	1023	2	FSM	ENSG00000204261.9	ENST00000412095.1	1015	2	-8	0	-5	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCCTGCTCCACCAGGC	NA	False	NA	NA	False	NA	NA	NA	32844125	32845695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32844871_32845417
WTC11_00075228	chr6	+	2304	1	FSM	ENSG00000204261.9	ENST00000666376.1	2182	1	7	-129	-5	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACATAGCGGGACGC	NA	False	NA	-58	True	NA	NA	NA	32844125	32846429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32844100_32846400
WTC11_00075229	chr6	+	1061	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	17	-61	17	61	multi-exon	FALSE	canonical	3	21	junction_5	4.17612260356422	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAGAATTAGCTAAGAC	32854136	False	NA	NA	False	NA	NA	NA	32854208	32859912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
WTC11_00075231	chr6	+	3019	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-12	1970	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTTTTCTTCCTCTTT	NA	False	NA	5	True	AATAAA	-16	NA	32894747	32903758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_32894928_32900919
WTC11_00075234	chr6	+	4282	14	FSM	ENSG00000204256.14	ENST00000679179.1	4282	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	231.132048121067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	32968898	32981040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075235	chr6	+	6084	11	FSM	ENSG00000204256.14	ENST00000469132.2	6084	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	154.878145650056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAAGAAAATATTAT	NA	False	NA	10	True	NA	NA	NA	32968898	32981286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32980465_32980581
WTC11_00075237	chr6	+	4603	13	FSM	ENSG00000204256.14	ENST00000449085.4	4579	13	-24	0	-24	0	multi-exon	FALSE	canonical	3	25	junction_1	174.956105606203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	32969185	False	NA	25	True	AATAAA	-21	NA	32969242	32981501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969353_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075238	chr6	+	4798	13	FSM	ENSG00000204256.14	ENST00000678250.1	4798	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	177.100469759086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	32969392	False	NA	25	True	AATAAA	-21	NA	32969448	32981501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969754_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075239	chr6	+	5678	14	FSM	ENSG00000204256.14_ENSG00000223837.2	ENST00000482914.5	4834	14	-1063	219	-342	0	multi-exon	FALSE	canonical	3	53	junction_1	230.032284844988	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAAGAAAATATTAT	32969833	False	NA	10	True	NA	NA	NA	32969889	32981286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075240	chr6	+	4807	13	FSM	ENSG00000204256.14	ENST00000374831.8	4807	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	168.345131599739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTAGAAGTAATCTTTA	32970785	False	NA	29	True	AATAAA	-25	NA	32970887	32981505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075242	chr6	+	4520	13	FSM	ENSG00000204256.14	ENST00000464592.6	4520	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	237.231763729527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCACCCCCCCCCGCCCC	32971067	False	NA	NA	False	NA	NA	NA	32971081	32980815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00075245	chr6	+	1152	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	6	-318	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.2972405340546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGAAGAGAACCATGA	33079885	True	NA	12	True	AATAAA	-24	NA	33080391	33086883	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33080535_33080688_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
WTC11_00075246	chr6	+	1176	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	1	-316	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAGAACCATGAAA	NA	False	NA	14	True	AATAAA	-26	NA	33080386	33086885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
WTC11_00075251	chr6	+	805	3	NIC	ENSG00000224557.8	novel	727	3	NA	NA	9	5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	45	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	NA	False	NA	22	True	TATAAA	-23	NA	33116687	33118786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33116833_33116956_33117221_33118390
WTC11_00075252	chr6	+	764	2	NNC	ENSG00000224557.8	novel	1213	3	NA	NA	633	181	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCACAGACCCTCTTACA	33117361	False	NA	16	True	ATTAAA	-28	NA	33117395	33118962	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33117588_33118390
WTC11_00075254	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	19.4543625498813	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	33194292	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
WTC11_00075255	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	69.8400504944063	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	33194251	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
WTC11_00075256	chr6	+	998	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	42	junction_1	15.1575063912241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	33204170	True	NA	23	True	AATAAA	-23	NA	33204633	33206831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
WTC11_00075257	chr6	+	1127	8	NIC	ENSG00000204228.4	novel	977	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_2	13.8047610834606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	33204222	False	NA	23	True	AATAAA	-23	NA	33204685	33206831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
WTC11_00075258	chr6	+	1739	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	2	0	2	0	multi-exon	FALSE	canonical	3	27	junction_3	11.146748404804	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	33203674	True	NA	27	True	NA	NA	NA	33208501	33212716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
WTC11_00075259	chr6	+	666	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	-24	0	0	0	multi-exon	TRUE	canonical	3	23596	junction_1	2990.1821014781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029961	True	NA	1	True	AATAAA	-14	NA	33272074	33276505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
WTC11_00075260	chr6	+	652	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	-13	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3308.74730827242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029961	True	NA	1	True	AATAAA	-14	NA	33272074	33276505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
WTC11_00075261	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	11671.6896737362	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029961	True	NA	6	True	AATAAA	-19	NA	33272074	33276510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
WTC11_00075262	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3008.26046744626	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	33029961	True	NA	7	True	AATAAA	-20	NA	33272074	33276511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
WTC11_00075263	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_4	2461.27786931911	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33030018	False	NA	6	True	AATAAA	-19	NA	33272131	33276510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
WTC11_00075264	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_2	1917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33273525	True	NA	6	True	AATAAA	-19	NA	33275865	33276510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33276067_33276175_33276268_33276390
WTC11_00075265	chr6	+	1810	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	30	-137	30	137	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCTAAAAGGCAAAGCTAA	33277066	False	NA	NA	False	NA	NA	NA	33277152	33278962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33277200_33279000
WTC11_00075267	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	130.573946695179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	33285733	True	NA	-34	True	NA	NA	NA	33289595	33290875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
WTC11_00075268	chr6	+	743	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	-67	58	-62	0	multi-exon	FALSE	canonical	3	255	junction_3	30.4667396060396	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	NA	False	NA	-34	True	NA	NA	NA	33289533	33290875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
WTC11_00075269	chr6	+	599	5	FSM	ENSG00000204220.12	ENST00000374607.5	598	5	-1	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	113.807677684768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCCTGACCAGGCAC	33285733	True	NA	25	True	AATAAA	-18	NA	33289595	33290934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325_33290451_33290715
WTC11_00075277	chr6	+	2263	15	FSM	ENSG00000112511.18	ENST00000374516.8	2263	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	25.4995998367962	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	NA	False	NA	8	True	AATAAA	-15	NA	33411013	33416439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414954_33415145_33415234_33415330_33415589_33415671_33415809
WTC11_00075278	chr6	+	2140	15	FSM	ENSG00000112511.18	ENST00000495509.6	1752	15	0	-388	0	0	multi-exon	FALSE	canonical	3	38	junction_11	29.0513268515697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	33411063	True	NA	8	True	AATAAA	-15	NA	33411125	33416439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
WTC11_00075284	chr6	+	9079	58	FSM	ENSG00000096433.11	ENST00000605930.3	9079	58	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_32	36.4980256826574	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTAAAAAGGGATGTG	33618033	True	NA	15	True	AATAAA	-15	NA	33621321	33696562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465_33659550_33662527_33662675_33662910_33663007_33663499_33663551_33663737_33663881_33664869_33664970_33665052_33665214_33665834_33665977_33667128_33667291_33667791_33667965_33668514_33668635_33668973_33669157_33670324_33670577_33670670_33670816_33671164_33671307_33672028_33672229_33673590_33673721_33674207_33674266_33675690_33675857_33676767_33676933_33677014_33677090_33677503_33677630_33678420_33678544_33678638_33678840_33679881_33680134_33680328_33680455_33680554_33680681_33682523_33682645_33683206_33683398_33684019_33684169_33684356_33684466_33684597_33684689_33684773_33684944_33685358_33685534_33685642_33685828_33686052_33686254_33686408_33686520_33687008_33687105_33687225_33687328_33687477_33687565_33688056_33688168_33688238_33688432_33688655_33688782_33689237_33689411_33690033_33690199_33690916_33691110_33691614_33691720_33691800_33691929_33692727_33692894_33693544_33693706_33694923_33695086_33695711
WTC11_00075287	chr6	+	1886	6	FSM	ENSG00000137309.20	ENST00000401473.7	1887	6	0	1	0	0	multi-exon	FALSE	canonical	3	6101	junction_3	5391.33458060247	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	33829092	True	NA	48	True	AATAAA	-19	NA	34236872	34246230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34236964_34237203_34237318_34240736_34240883_34242711_34242796_34243467_34243519_34244830
WTC11_00075288	chr6	+	2159	5	FSM	ENSG00000137309.20	ENST00000447654.5	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	16478	junction_2	1560.29762785822	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	33829092	True	NA	48	True	AATAAA	-19	NA	34236872	34246230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
WTC11_00075289	chr6	+	1772	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	1	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	7979.74966320999	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	33829092	True	NA	48	True	AATAAA	-19	NA	34236872	34246230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
WTC11_00075295	chr6	+	1138	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	-459	-79	-439	-1	multi-exon	FALSE	canonical	3	19	junction_1	1281.16107008448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTTCCCTTTTTCCTC	NA	False	NA	23	True	AATAAA	-23	NA	34757065	34773793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
WTC11_00075296	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	409.602050776116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	34738575	True	NA	7	True	TATAAA	-18	NA	34757504	34773857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
WTC11_00075297	chr6	+	1156	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	-182	80	-133	0	multi-exon	FALSE	canonical	3	2947	junction_3	168.690545081815	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	34757344	False	NA	-56	True	NA	NA	NA	34757371	34773714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
WTC11_00075306	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	22.5345413877353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259746	False	NA	8	True	AATAAA	-14	NA	35259773	35295983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
WTC11_00075316	chr6	+	651	5	FSM	ENSG00000198755.11	ENST00000490335.4	632	5	-19	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	2028.48975533523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTGGCTGTCAAC	35276971	True	NA	NA	False	NA	NA	NA	35468400	35470640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35469028_35469380_35469530_35470178_35470352_35470579
WTC11_00075317	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1858.10047091109	3846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	35276971	True	NA	23	True	AATAAA	-15	NA	35468400	35470780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
WTC11_00075319	chr6	+	1082	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	-19	0	0	0	multi-exon	FALSE	canonical	3	14193	junction_4	173.618835383722	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276971	True	NA	28	True	AATAAA	-20	NA	35468400	35470785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
WTC11_00075323	chr6	+	4308	12	FSM	ENSG00000112062.11	ENST00000229794.9	4222	12	0	-86	0	86	multi-exon	FALSE	canonical	3	147	junction_9	26.4518899010797	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAAATGTCAACCATTT	36024645	True	NA	93	True	NA	NA	NA	36027807	36111322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379
WTC11_00075324	chr6	+	2282	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	-427	4461	-398	853	multi-exon	FALSE	canonical	3	74	junction_1	7.82768977877428	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATTCCAGGGGGAAAT	NA	False	NA	40	True	AATAAA	-26	NA	36130085	36140060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
WTC11_00075328	chr6	+	5380	9	FSM	ENSG00000096070.19	ENST00000441123.1	5380	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.18006346436	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGTTGTGTTTAAT	36200383	False	NA	6	True	AATAAA	-18	NA	36200405	36232790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36201771_36204657_36204815_36207312_36207445_36209786_36209916_36210200_36210529_36211257_36211561_36213879_36214387_36217916_36218011_36230425
WTC11_00075335	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_3	25.7871982161059	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	36439629	True	NA	4	True	AATAAA	-14	NA	36442999	36491141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
WTC11_00075342	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.920982290514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	36884594	True	NA	14	True	ATTAAA	-19	NA	36885951	36928964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
WTC11_00075348	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	106.524118185048	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	37347682	True	NA	-51	True	NA	NA	NA	37354014	37391168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
WTC11_00075362	chr6	+	3694	9	NNC	ENSG00000001167.15	novel	1660	9	NA	NA	-21	2022	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	29.7447474354717	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAATGTGACTTTTGA	41070759	True	NA	8	True	AATAAA	-17	NA	41072952	41099972	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091545_41091695_41092911_41093086_41094395_41094498_41097356
WTC11_00075365	chr6	+	4572	17	FSM	ENSG00000137166.17	ENST00000409208.5	3341	17	-147	-1084	0	1080	multi-exon	TRUE	canonical	3	55	junction_6	12.0513225415305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCAGGTGTCCTTCCA	41546395	False	NA	NA	False	NA	NA	NA	41546425	41601043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41546868_41565744_41565965_41577985_41578082_41584768_41584892_41585430_41585518_41587008_41587157_41587298_41587513_41587792_41587898_41588643_41588732_41589770_41589855_41589998_41590171_41590270_41590348_41591220_41591323_41594869_41594992_41597175_41597243_41597780_41597951_41598788
WTC11_00075366	chr6	+	5906	17	FSM	ENSG00000137166.17	ENST00000373063.7	5910	17	0	4	0	-4	multi-exon	FALSE	canonical	3	16	junction_6	18.5319614113024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTGCTGCGGCCGCT	41546395	False	NA	NA	False	AATAAA	-12	NA	41546425	41602380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41546868_41565744_41565965_41577985_41578082_41584768_41584892_41585430_41585518_41587008_41587157_41587301_41587513_41587792_41587898_41588643_41588732_41589770_41589855_41589998_41590171_41590270_41590348_41591220_41591323_41594869_41594992_41597175_41597243_41597780_41597951_41598788
WTC11_00075369	chr6	+	1631	5	NNC	ENSG00000112559.15	novel	1606	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	68.7913512005688	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	41631989	True	NA	11	True	AATAAA	-18	NA	41638437	41654244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_41638653_41638738_41638826_41646130_41646309_41649618_41649844_41653318
WTC11_00075370	chr6	+	1455	4	FSM	ENSG00000112559.15	ENST00000373050.8	809	4	-39	-607	0	2	multi-exon	FALSE	canonical	3	12	junction_2	98.2886904311308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCAGGACTCATGACT	41631989	True	NA	13	True	AATAAA	-20	NA	41638437	41654246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41638653_41638738_41638826_41649618_41649844_41653318
WTC11_00075371	chr6	+	1631	5	FSM	ENSG00000112559.15	ENST00000230321.11	1606	5	-25	0	5	0	multi-exon	FALSE	canonical	3	181	junction_1	25.907286619791	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	41631994	True	NA	11	True	AATAAA	-18	NA	41638442	41654244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41638653_41638738_41638826_41646125_41646309_41649618_41649844_41653318
WTC11_00075375	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	500.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	41766950	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41787826_41789231_41789337_41789530
WTC11_00075377	chr6	+	582	3	NNC	ENSG00000214736.8	novel	637	3	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	802.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCATTTTATTCTTTT	41766994	False	NA	27	True	AATAAA	-14	NA	41787705	41789891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_41787826_41789231_41789333_41789530
WTC11_00075381	chr6	+	6687	9	FSM	ENSG00000137413.17	ENST00000372977.8	6678	9	-11	2	0	-2	multi-exon	FALSE	canonical	3	16	junction_8	35.9650437925495	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCATGGTTGTTGTAT	42050490	False	NA	NA	False	AATAAA	-17	NA	42050512	42083270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42066311_42066460_42068464_42068608_42077099_42077240_42077532
WTC11_00075383	chr6	+	781	5	NNC	ENSG00000137413.17	novel	794	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	41.3060225633018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTCAGATTATCTTT	42047054	True	NA	NA	False	AATAAA	-17	NA	42050539	42057783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056035_42057388
WTC11_00075385	chr6	+	7915	47	FSM	ENSG00000024048.11	ENST00000372901.2	7891	47	-24	0	-24	0	multi-exon	TRUE	canonical	3	57	junction_8	17.4604061951335	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	42560400	True	NA	6	True	AATAAA	-21	NA	42564004	42693505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
WTC11_00075391	chr6	+	3755	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	14	0	11	multi-exon	FALSE	canonical	3	121	junction_6	144.823743449293	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGACATAACTAATTCGTT	42879666	False	NA	40	True	AATAAA	-37	NA	42879681	42889911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
WTC11_00075392	chr6	+	707	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	-4	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	55.7673739743947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	42877409	True	NA	24	True	AATAAA	-21	NA	42879928	42886249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
WTC11_00075399	chr6	+	588	4	FSM	ENSG00000112640.16	ENST00000467447.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	34.554305086342	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACAACGGGATTGCTGA	43007001	False	NA	NA	False	NA	NA	NA	43007011	43008219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43007111_43007195_43007307_43007413_43007507_43007934
WTC11_00075401	chr6	+	1836	10	FSM	ENSG00000124702.19	ENST00000244670.12	1903	10	67	0	67	0	multi-exon	FALSE	canonical	1	1	junction_3	433.449215274664	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTTTGTGGAATA	43014159	False	NA	27	True	ATTAAA	-14	NA	43014169	43021298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
WTC11_00075404	chr6	+	1874	1	FSM	ENSG00000124541.7	ENST00000607555.1	1005	1	-858	-11	-858	11	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGGTTTTGTTTTTG	43032279	False	NA	18	True	TATAAA	-19	NA	43032293	43034167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43032300_43034200
WTC11_00075408	chr6	+	2785	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	-15	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_1	28.4164757447154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	43059567	True	NA	10	True	AATAAA	-11	NA	43059879	43075087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
WTC11_00075412	chr6	+	4266	20	FSM	ENSG00000112655.16	ENST00000230419.9	4222	20	-47	3	-40	0	multi-exon	FALSE	canonical	3	717	junction_5	65.6050467621571	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43066517	True	NA	11	True	AATAAA	-14	NA	43076266	43161712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
WTC11_00075413	chr6	+	902	2	FSM	ENSG00000112655.16	ENST00000476760.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGAGCCTCGAGGT	43066557	True	NA	NA	False	NA	NA	NA	43076306	43129617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976
WTC11_00075415	chr6	+	3804	17	FSM	ENSG00000112655.16	ENST00000349241.6	3801	17	-3	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	207.771659520734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43066589	True	NA	11	True	AATAAA	-14	NA	43076338	43161712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
WTC11_00075418	chr6	+	5282	19	FSM	ENSG00000112655.16	ENST00000487673.5	5282	19	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	66.9933661724138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTCTGAGATTCAT	43066619	False	NA	12	True	AATAAA	-15	NA	43076368	43161713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
WTC11_00075422	chr6	+	411	2	FSM	ENSG00000112659.14	ENST00000515344.1	599	2	144	44	144	-44	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGGCCTGTCACCTCA	NA	False	NA	NA	False	NA	NA	NA	43203416	43204088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43203593_43203853
WTC11_00075427	chr6	+	567	3	FSM	ENSG00000112659.14	ENST00000504647.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCTGGGAGCAGGCTG	NA	False	NA	11	True	AATAAA	-17	NA	43223239	43224584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43223398_43224094_43224169_43224249
WTC11_00075429	chr6	+	5041	22	FSM	ENSG00000124574.15	ENST00000372530.9	5043	22	0	2	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.5135839730983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	43427082	True	NA	16	True	ATTAAA	-20	NA	43427540	43450425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43427758_43427967_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
WTC11_00075431	chr6	+	1769	3	NIC	ENSG00000124574.15	novel	4542	16	NA	NA	15	-35	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTCTGTGTATTAAAA	NA	False	NA	-22	True	GATAAA	-9	NA	43448007	43450387	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43449205_43449421_43449535_43449928
WTC11_00075433	chr6	+	2763	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	15	0	15	0	multi-exon	FALSE	canonical	2	9	junction_2	51.1457720637787	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474720	True	NA	17	True	AATAAA	-18	NA	43477537	43506556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
WTC11_00075435	chr6	+	2677	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	-12	0	-8	0	multi-exon	FALSE	canonical	3	80	junction_3	23.0592366539252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474743	True	NA	14	True	AATAAA	-15	NA	43477560	43506553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
WTC11_00075439	chr6	+	3268	4	FSM	ENSG00000137221.14	ENST00000454762.1	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	7.25718035235908	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43501432	False	NA	14	True	AATAAA	-15	NA	43501525	43506553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43501688_43502282_43502350_43503400_43503509_43503622
WTC11_00075450	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	10	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	43631811	True	NA	10	True	AATAAA	-16	NA	43635839	43640941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43635922_43636380_43636647_43640020
WTC11_00075453	chr6	+	3553	7	FSM	ENSG00000112715.26	ENST00000372067.8	3535	7	-18	0	11	0	multi-exon	FALSE	canonical	3	72	junction_5	48.5606722450265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCTTGGTTTCTCCTT	43763790	True	NA	17	True	ATTAAA	-22	NA	43770194	43786487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
WTC11_00075454	chr6	+	3418	6	FSM	ENSG00000112715.26	ENST00000372064.9	2909	6	-512	3	11	0	multi-exon	FALSE	canonical	3	49	junction_5	61.1601177238893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCCTCTTGGTTTCTC	43763790	True	NA	14	True	ATTAAA	-19	NA	43770194	43786484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43784540
WTC11_00075459	chr6	+	7870	3	FSM	ENSG00000112715.26	ENST00000480614.1	12167	3	4297	0	-251	0	multi-exon	FALSE	canonical	3	194	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCCTCTTGGTTTCTC	43777258	False	NA	14	True	ATTAAA	-19	NA	43777468	43786484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43777666_43778459_43778537_43778888
WTC11_00075461	chr6	+	5255	4	FSM	ENSG00000181577.16	ENST00000336600.6	5250	4	-5	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTCTGGAGCACCTA	44000388	True	NA	3	True	ATTAAA	-18	NA	44000579	44007612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44000701_44001016_44001144_44002052_44002128_44002680
WTC11_00075464	chr6	+	3438	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	97	junction_1	28.6587214308243	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44124541	True	NA	14	True	AATAAA	-19	NA	44127548	44155519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44127867_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
WTC11_00075465	chr6	+	3190	23	NNC	ENSG00000137216.19	novel	2921	21	NA	NA	-2813	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.617799081272	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44129212	False	NA	14	True	AATAAA	-19	NA	44132219	44155519	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_44132290_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
WTC11_00075468	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	44216691	True	NA	14	True	AATAAA	-19	NA	44216925	44218234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44216969_44217449
WTC11_00075472	chr6	+	2137	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	-55	1	-19	0	multi-exon	FALSE	canonical	3	1262	junction_1	228.806990472076	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44201890	True	NA	78	True	AATAAA	-17	NA	44223539	44234141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00075473	chr6	+	2240	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	225	junction_2	614.014175963409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGGCTCCCTGTGTC	44201893	True	NA	77	True	AATAAA	-16	NA	44223542	44234140	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00075476	chr6	+	2071	13	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	483.281685458905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGGCTCCCTGTGTC	44201958	True	NA	77	True	AATAAA	-16	NA	44223607	44234140	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44223642_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00075478	chr6	+	2309	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	-8	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	671.081561018079	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44223740	True	NA	78	True	AATAAA	-17	NA	44223791	44234141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00075483	chr6	+	2159	12	FSM	ENSG00000112759.19	ENST00000371708.1	2159	12	0	0	0	0	multi-exon	FALSE	canonical	3	1700	junction_11	156.625256821434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44227118	False	NA	78	True	AATAAA	-17	NA	44227138	44234141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00075487	chr6	+	2582	12	FSM	ENSG00000096384.20	ENST00000353801.7	2582	12	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	4249.27429876158	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44164671	True	NA	33	True	AATAAA	-21	NA	44247086	44253883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44247196_44248616_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
WTC11_00075489	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4279.49636528597	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44247852	False	NA	33	True	AATAAA	-21	NA	44247865	44253883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
WTC11_00075499	chr6	+	1743	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	69	junction_1	29.1794019815349	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461578	True	NA	78	True	AATAAA	-20	NA	49463367	49493107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
WTC11_00075500	chr6	+	1882	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-2	119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.2553350881642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCACACATGAGGACCCT	49461578	True	NA	NA	False	NA	NA	NA	49463367	49493226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_49463456_49470140_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
WTC11_00075501	chr6	+	1758	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	29.4912592983074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461582	True	NA	78	True	AATAAA	-20	NA	49463371	49493107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
WTC11_00075510	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.38435587980495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	52419594	True	NA	NA	False	AATAAA	-30	NA	52420341	52497198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
WTC11_00075511	chr6	+	2093	11	NIC	ENSG00000096093.16	novel	6849	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_4	17.2281745986045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGGGTTCCTGAAGTT	52419606	True	NA	10	True	AATACA	-23	NA	52420353	52492421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454061_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
WTC11_00075513	chr6	+	2134	4	FSM	ENSG00000225791.7	ENST00000666605.1	2162	4	28	0	5	0	multi-exon	FALSE	canonical	3	10	junction_2	11.8133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	52576874	True	NA	-8	True	AATAAA	-2	NA	52577208	52583974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52577652_52578049_52578394_52579374_52579610_52582862
WTC11_00075515	chr6	+	2333	4	FSM	ENSG00000225791.7	ENST00000658849.1	2319	4	-14	0	3	0	multi-exon	FALSE	canonical	3	12	junction_1	9.79795897113271	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	52576882	True	NA	-2	True	AATAAA	-8	NA	52577216	52583980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52577652_52578049_52578595_52579374_52579610_52582862
WTC11_00075517	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	52663885	True	NA	4	True	AATAAA	-18	NA	52664429	52669155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52665420_52666388
WTC11_00075530	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	21.9544984001001	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	57044165	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
WTC11_00075531	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	67.9008152385461	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	57089922	False	NA	14	True	ATTAAA	-17	NA	57090029	57170201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
WTC11_00075532	chr6	+	11937	4	FSM	ENSG00000112200.17	ENST00000370708.8	9478	4	0	-2459	0	2459	multi-exon	FALSE	canonical	3	31	junction_3	122.956180089584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTCTGGTAAACAGAAC	57082089	True	NA	80	True	NA	NA	NA	57090075	57112175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57100602
WTC11_00075533	chr6	+	3366	11	FSM	ENSG00000112200.17	ENST00000444273.6	3402	11	0	36	0	-36	multi-exon	FALSE	canonical	3	203	junction_5	30.0601064535707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCAGCCTGGGCAACAG	57082126	True	NA	NA	False	NA	NA	NA	57090112	57151335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718
WTC11_00075534	chr6	+	3361	13	FSM	ENSG00000112200.17	ENST00000491832.6	3632	13	-113	384	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.6691765929768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTACTTCTATCTT	57082089	True	NA	NA	False	AATAAA	-44	NA	57090075	57154160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860
WTC11_00075535	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.9884269085693	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	57082201	True	NA	8	True	AGTAAA	-20	NA	57090187	57170305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
WTC11_00075538	chr6	+	1288	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	-22	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7598392985224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	57314291	True	NA	NA	False	AATAAA	-17	NA	57317607	57378976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
WTC11_00075545	chr6	+	9161	15	NIC	ENSG00000118482.12	novel	18797	16	NA	NA	0	2135	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	25.2211645816989	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTCTGGAGACTTTC	63632931	True	NA	NA	False	NA	NA	NA	63635801	63716644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
WTC11_00075549	chr6	+	2118	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-140	77694	13	-21995	5prime_fragment	FALSE	canonical	3	89	junction_2	23.7445250349592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	70407372	True	NA	NA	False	AATAAA	-21	NA	70413437	70482965	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
WTC11_00075550	chr6	+	6215	22	FSM	ENSG00000082269.17	ENST00000418814.7	6215	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	33.7638860322683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	70407442	True	NA	22	True	AATAAA	-34	NA	70413507	70561174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
WTC11_00075552	chr6	+	5701	23	NIC	ENSG00000082269.17	novel	5042	22	NA	NA	3	-1	intron_retention	FALSE	canonical	3	67	junction_15	28.255621835119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTAATCCTTTGCTT	70407445	True	NA	21	True	AATAAA	-33	NA	70413510	70561173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
WTC11_00075557	chr6	+	1204	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	-21	0	-8	0	multi-exon	FALSE	canonical	3	154	junction_2	29.5	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562187	True	NA	15	True	AATAAA	-16	NA	70566908	70589569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70567005_70579413_70579567_70588614
WTC11_00075560	chr6	+	3214	11	FSM	ENSG00000112305.15	ENST00000370455.8	3214	11	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	90.224664033733	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTTAAAATCCTGGTG	70664327	True	NA	2	True	AATAAA	-10	NA	70667882	70862003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70791688_70791770_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
WTC11_00075563	chr6	+	8811	7	FSM	ENSG00000119900.9	ENST00000370435.5	8492	7	-374	55	-374	-55	multi-exon	FALSE	canonical	3	56	junction_2	9.94428926011753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATTATTTTCTTTTA	71288397	True	NA	NA	False	NA	NA	NA	71288436	71309004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_71289171_71293292_71293380_71293532_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
WTC11_00075564	chr6	+	8484	7	NIC	ENSG00000119900.9	novel	8492	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	26	junction_2	20.6693546639033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAAGTTATTTTTATT	71288126	True	NA	NA	False	AATAAA	-22	NA	71288821	71309059	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_71289171_71293292_71293380_71293529_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
WTC11_00075571	chr6	+	3633	12	FSM	ENSG00000135297.17	ENST00000681509.1	3629	12	-4	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	73.069196232178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460213	True	NA	NA	False	NA	NA	NA	73461726	73502427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00075573	chr6	+	4074	13	FSM	ENSG00000135297.17	ENST00000681890.1	4070	13	-4	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	89.4083562463077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460213	True	NA	NA	False	NA	NA	NA	73461726	73502427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73486597_73486762_73492233_73492353_73497735_73497897_73500573
WTC11_00075574	chr6	+	9677	12	FSM	ENSG00000135297.17	ENST00000498286.6	10698	12	-10	1031	0	-1031	multi-exon	FALSE	canonical	3	175	junction_1	18.5374314195997	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGCAGACTTAAAATAT	73460213	True	NA	NA	False	NA	NA	NA	73461726	73508205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00075580	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	2	173	junction_5	81.167543589326	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	75598343	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
WTC11_00075581	chr6	+	2700	15	FSM	ENSG00000112701.18	ENST00000327284.12	2700	15	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_5	120.378823820844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTATGTCTTTGTTTT	75601768	True	NA	7	True	ATTAAA	-17	NA	75601926	75678975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
WTC11_00075582	chr6	+	5600	24	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	0	-1068	combination_of_known_junctions	FALSE	canonical	2	215	junction_5	76.3280899517994	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGAAGTTGTTTTT	75598343	True	NA	NA	False	AATAAA	-9	NA	75601879	75717213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
WTC11_00075586	chr6	+	8577	32	FSM	ENSG00000196586.17	ENST00000369975.6	5598	32	-54	-2925	-20	0	multi-exon	FALSE	canonical	3	141	junction_13	21.4709832506147	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75749160	False	NA	10	True	AATAAA	-25	NA	75749180	75919537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75907604_75907709_75908495_75908628_75914062_75914282_75914812
WTC11_00075598	chr6	+	4056	22	FSM	ENSG00000112742.10	ENST00000230510.7	3477	22	474	-1053	-28	1053	multi-exon	TRUE	canonical	3	34	junction_1	99.9802928427202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTCTGGACCTAAT	79998879	True	NA	20	True	AATAAA	-14	NA	80004620	80043580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80004714_80005829_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
WTC11_00075599	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	34.3235901900925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	79998907	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
WTC11_00075603	chr6	+	3680	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	-12	0	-12	0	multi-exon	FALSE	canonical	3	345	junction_3	24.9923445068809	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	80100712	True	NA	3	True	AATAAA	-17	NA	80106658	80346270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
WTC11_00075618	chr6	+	3560	9	FSM	ENSG00000135318.12	ENST00000257770.8	3562	9	-4	6	-4	-6	multi-exon	FALSE	canonical	0	0	junction_3	1.19895788082818	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTTGGTCTTTGATA	85450045	True	NA	NA	False	AATAAA	-10	NA	85450078	85495778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_85450479_85467059_85467283_85471236_85471426_85485234_85485433_85487334_85487490_85489493_85489600_85490507_85490658_85491976_85492178_85493840
WTC11_00075624	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	5.8970764115858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	87472149	True	NA	85	True	AATAAA	-17	NA	87472973	87512336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
WTC11_00075627	chr6	+	2512	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	-14	0	-9	0	multi-exon	FALSE	canonical	3	346	junction_14	105.424192611618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584053	True	NA	16	True	AATAAA	-23	NA	87590120	87667451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
WTC11_00075628	chr6	+	2373	19	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	171.809613263858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584078	True	NA	16	True	AATAAA	-23	NA	87590145	87667451	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
WTC11_00075632	chr6	+	2601	2	FSM	ENSG00000146278.11	ENST00000354922.3	1345	2	0	-1256	0	293	multi-exon	FALSE	canonical	3	45	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGGTTTTAACAACACA	89081642	True	NA	NA	False	NA	NA	NA	89081835	89085453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89082736_89083752
WTC11_00075634	chr6	+	5368	16	FSM	ENSG00000135299.17	ENST00000339746.9	5368	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	11.8707858019406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTGTGAATACTTTGT	89432450	True	NA	NA	False	ATTAAA	-35	NA	89433151	89633821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
WTC11_00075635	chr6	+	2977	16	FSM	ENSG00000135299.17	ENST00000447838.6	2968	16	-9	0	0	0	multi-exon	FALSE	canonical	2	14	junction_15	13.9628077405656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTAATTCTCCAACTGT	89432502	True	NA	6	True	AATAAA	-14	NA	89433203	89631497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629224_89630432
WTC11_00075636	chr6	+	4735	7	FSM	ENSG00000135299.17	ENST00000415924.6	4750	7	15	0	15	0	multi-exon	FALSE	canonical	3	37	junction_1	8.85845484394554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGGGAGTGTTGTT	NA	False	NA	-22	True	AATAAA	-30	NA	89621228	89633654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
WTC11_00075641	chr6	+	6725	10	FSM	ENSG00000118412.13	ENST00000237177.10	6719	10	-8	2	0	0	multi-exon	FALSE	canonical	2	18	junction_1	29.7470820230975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATTCGAATGTTTC	89825734	True	NA	17	True	AATAAA	-20	NA	89829930	89874434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873805
WTC11_00075642	chr6	+	5465	1	FSM	ENSG00000280451.1	ENST00000624663.1	1212	1	-281	-3972	-281	3972	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCTATATTTGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93811543	93817008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_93811500_93817000
WTC11_00075645	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	9.01041064547005	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	95575932	True	NA	-29	True	AATAAA	-23	NA	95577534	95609452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
WTC11_00075656	chr6	+	1889	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	-16	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	99519758	True	NA	NA	False	NA	NA	NA	99521032	99533185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
WTC11_00075657	chr6	+	631	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATACTGAACAATGAGCT	NA	False	NA	4	True	GATAAA	-10	NA	99537626	99538257	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_99537600_99538300
WTC11_00075664	chr6	+	5506	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	528	-3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	139.497510929606	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATGGGTTTTGGAGAT	104956390	False	NA	12	True	AATAAA	-18	NA	104957634	105083329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104957852_104958098_104958287_105026297_105026483_105078413
WTC11_00075665	chr6	+	5442	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	528	-3	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	132.575345453905	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATGGGTTTTGGAGAT	104956390	False	NA	12	True	AATAAA	-18	NA	104957634	105083329	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104957788_104958098_104958287_105026297_105026483_105078413
WTC11_00075669	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	10.7030629053349	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	106627230	True	NA	NA	False	NA	NA	NA	106629613	106653823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
WTC11_00075671	chr6	+	1441	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	-21	0	-7	0	multi-exon	FALSE	canonical	3	34	junction_1	85.2655981168385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	NA	False	NA	16	True	AATAAA	-16	NA	107028191	107051336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
WTC11_00075679	chr6	+	7389	3	FSM	ENSG00000118689.15	ENST00000406360.2	7296	3	-98	5	-98	-5	multi-exon	FALSE	canonical	3	65	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACTCCAAGAAGTCTCT	108560258	False	NA	3	True	AATAAA	-18	NA	108560818	108684769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_108561830_108663454_108664890_108679826
WTC11_00075681	chr6	+	528	3	FSM	ENSG00000118690.13	ENST00000414610.1	555	3	0	27	0	-27	multi-exon	FALSE	canonical	2	2	junction_1	1	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAATAAATGCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	108868977	108880229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_108868996_108876142_108876351_108879927
WTC11_00075686	chr6	+	3646	12	NIC	ENSG00000183137.15	novel	2522	12	NA	NA	-3	982	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	21.0206510031217	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTGAAACCCTGTCTC	109094385	True	NA	NA	False	NA	NA	NA	109095492	109164892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
WTC11_00075692	chr6	+	2921	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	-6	0	-6	0	multi-exon	TRUE	canonical	2	5	junction_6	54.3957948221282	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	109688428	True	NA	-1	True	AATAAA	-2	NA	109691258	109825414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
WTC11_00075693	chr6	+	3166	24	FSM	ENSG00000112367.12	ENST00000675122.1	3209	24	43	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_17	69.2761657827399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCCTTTGCTTTAT	109688428	True	NA	16	True	AATAAA	-19	NA	109691258	109825431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109785670_109785770_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
WTC11_00075694	chr6	+	1397	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	-10	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	26.9351072023113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688455	True	NA	34	True	AATAAA	-20	NA	109691285	109743480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
WTC11_00075695	chr6	+	2748	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	-23	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.1486439719681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	109688434	True	NA	NA	False	AATAAA	-20	NA	109691264	109791772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
WTC11_00075696	chr6	+	3035	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	-10	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.3083463840334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	109688455	True	NA	11	True	AATAAA	-14	NA	109691285	109825426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
WTC11_00075697	chr6	+	2001	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	186	0	-5	multi-exon	FALSE	canonical	3	192	junction_7	25.4157270931498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGAAGGTGCTCAGTAA	109688481	True	NA	NA	False	AATAAA	-11	NA	109691311	109767022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
WTC11_00075702	chr6	+	3073	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	-14	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	289.483483984838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	110874759	False	NA	25	True	AATAAA	-24	NA	110874769	110895708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
WTC11_00075703	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_1	163.149501991272	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	110935481	True	NA	14	True	CATAAA	-16	NA	110958705	110967872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
WTC11_00075704	chr6	+	809	6	NNC	ENSG00000155115.7	novel	788	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	365	junction_1	683.449017849905	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	110935481	True	NA	32	True	CATAAA	-34	NA	110958705	110967890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_110958830_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
WTC11_00075714	chr6	+	2360	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	-193	4	-193	-4	multi-exon	FALSE	canonical	3	18	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTATTCTCTTTCCTAT	111483292	False	NA	6	True	AATAAA	-15	NA	111483302	111578176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111483666_111574620_111574803_111576361
WTC11_00075715	chr6	+	553	3	FSM	ENSG00000231889.8	ENST00000691364.1	599	3	45	1	-6	0	multi-exon	FALSE	canonical	3	65	junction_1	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111482490	True	NA	NA	False	ATTAAA	-16	NA	111483543	111503608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111483666_111484743_111484862_111503295
WTC11_00075718	chr6	+	487	3	NIC	ENSG00000203778.8	novel	2551	4	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	127	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACAGTTGAGCTCTTT	112085540	True	NA	21	True	AATAAA	-22	NA	112087592	112100889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_112087721_112099269_112099409_112100669
WTC11_00075720	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	113969800	False	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
WTC11_00075723	chr6	+	5425	2	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28693	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	114422448	False	NA	NA	False	NA	NA	NA	114422474	114427941	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427215_114427256
WTC11_00075724	chr6	+	5427	2	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3139	-28693	at_least_one_novel_splicesite	TRUE	canonical	1	617	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	114422446	False	NA	NA	False	NA	NA	NA	114422472	114427941	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427173_114427214
WTC11_00075727	chr6	+	5343	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3139	-28693	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	114422446	False	NA	NA	False	NA	NA	NA	114422472	114427941	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427047_114427088_114427215_114427298
WTC11_00075729	chr6	+	5596	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28438	at_least_one_novel_splicesite	TRUE	canonical	2	576	junction_2	253.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTTCTTTTGTGTTTCT	114422448	False	NA	NA	False	NA	NA	NA	114422474	114428196	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427089_114427172_114427257_114427298
WTC11_00075730	chr6	+	5596	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	281.219961358839	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTTCTTTTGTGTTTCT	114422448	False	NA	NA	False	NA	NA	NA	114422474	114428196	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427047_114427088_114427173_114427214_114427257_114427298
WTC11_00075731	chr6	+	5554	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28438	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	335	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTTCTTTTGTGTTTCT	114422448	False	NA	NA	False	NA	NA	NA	114422474	114428196	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427047_114427172_114427215_114427256
WTC11_00075732	chr6	+	843	2	FSM	ENSG00000228624.8	ENST00000517965.1	850	2	7	0	7	0	multi-exon	FALSE	canonical	3	134	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTGCAGCCTGTTCT	114448938	True	NA	NA	False	NA	NA	NA	114448966	114456634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_114449032_114455856
WTC11_00075735	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	38.043037829184	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	116094342	True	NA	4	True	ATTAAA	-15	NA	116100852	116249497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
WTC11_00075736	chr6	+	667	7	FSM	ENSG00000178425.14	ENST00000419791.3	667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.972872250845	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTAAAGTGGGTCCTG	116094340	True	NA	NA	False	NA	NA	NA	116100850	116145495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116145437
WTC11_00075737	chr6	+	417	3	FSM	ENSG00000178425.14	ENST00000417846.2	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	3	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGAAGTCCTTTTAT	116110838	False	NA	NA	False	TATAAA	-16	NA	116110851	116118092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116110957_116115690_116115771_116117860
WTC11_00075740	chr6	+	10617	6	FSM	ENSG00000111817.19	ENST00000644252.3	10621	6	0	4	0	-3	multi-exon	FALSE	canonical	3	127	junction_4	10.8332820511607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTAGTCTATGGTGTT	116365395	True	NA	4	True	AATAAA	-17	NA	116370946	116444857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116433342_116433551_116435586
WTC11_00075741	chr6	+	3692	5	FSM	ENSG00000111817.19	ENST00000359564.3	3692	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	59.918694912356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTATTTTCCTAAATAA	116371032	False	NA	-10	True	AATAGA	-12	NA	116371049	116438243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116435586
WTC11_00075744	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	274.896789537381	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	116561253	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
WTC11_00075745	chr6	+	5400	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	-15	0	0	0	multi-exon	FALSE	canonical	3	602	junction_4	54.3251527583883	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	116561253	True	NA	NA	False	AATAAA	-19	NA	116571488	116597675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
WTC11_00075748	chr6	+	2174	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	-24	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	25.2978179263891	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	116679691	True	NA	2	True	AATAAA	-17	NA	116681186	116741866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
WTC11_00075749	chr6	+	3853	15	FSM	ENSG00000164465.19	ENST00000338728.10	3614	15	-239	0	-205	0	multi-exon	FALSE	canonical	3	52	junction_12	13.4361680640314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTGACTCTCACTAG	117482408	True	NA	16	True	AATAAA	-16	NA	117482434	117549797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540667_117540816_117540917_117541026_117543123_117543212_117544527_117544578_117545477_117545598_117547906
WTC11_00075761	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	121407421	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_121435833_121446831
WTC11_00075763	chr6	+	2677	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	-81	0	81	multi-exon	TRUE	canonical	3	30	junction_11	32.939654420369	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAATAAAAAAGTGAGA	122397692	True	NA	NA	False	TTTAAA	-39	NA	122399651	122433200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
WTC11_00075766	chr6	+	1863	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-20	-6	combination_of_known_splicesites	FALSE	canonical	3	142	junction_2	9.62496753241277	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGACACAAGTCTCCTT	122481253	True	NA	12	True	AATAAA	-25	NA	122482058	122726366	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
WTC11_00075784	chr6	+	6272	16	FSM	ENSG00000111912.20	ENST00000392477.7	6264	16	-20	12	0	-12	multi-exon	FALSE	canonical	3	10	junction_8	4.54312667664022	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAAATAACCCAGTCT	125790066	True	NA	NA	False	ATTAAA	-9	NA	125790939	125932022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125791068_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089_125881204_125882425_125882552_125885158_125885344_125888938_125889982_125890641_125890811_125915332_125915481_125920942_125921069_125922681_125922835_125927662_125927759_125928173_125928248_125928635
WTC11_00075789	chr6	+	1857	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	-14	0	0	0	multi-exon	FALSE	canonical	3	270	junction_7	38.6465464893767	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981506	True	NA	17	True	AATAAA	-22	NA	125986525	126039276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
WTC11_00075801	chr6	+	2271	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	-9	5	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.8884444373331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	127264365	True	NA	NA	False	AATAAA	-18	NA	127266839	127288562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
WTC11_00075806	chr6	+	4509	29	NIC	ENSG00000196569.14	novel	9696	65	NA	NA	18141	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	4.37700391424387	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTGCCTGTTTTGTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	129383222	129516565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_129383234_129391490_129391654_129393044_129393256_129401223_129401341_129402323_129402488_129403820_129403960_129427751_129427855_129438645_129438763_129440815_129440999_129445666_129445822_129452987_129453132_129454154_129454289_129456334_129456495_129460199_129460325_129464289_129464453_129465144_129465290_129473213_129473353_129478692_129478814_129481262_129481440_129486473_129486623_129491900_129492078_129492314_129492484_129502658_129502772_129503090_129503281_129505199_129505356_129507488_129507643_129512362_129512494_129514372_129514596_129516189
WTC11_00075812	chr6	+	3742	4	NNC	ENSG00000164484.12	novel	3233	3	NA	NA	-36	342	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	28.2960539062723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCTGCTTAAAGTACT	130364811	True	NA	4	True	AATAAA	-5	NA	130365980	130443409	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_130366525_130385172_130385237_130439347_130439479_130440406
WTC11_00075814	chr6	+	3590	3	FSM	ENSG00000164484.12	ENST00000296978.4	3233	3	0	-357	0	357	multi-exon	FALSE	canonical	3	64	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTTTTCACACTTTC	130364847	True	NA	19	True	AATAAA	-20	NA	130366016	130443424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_130366525_130385172_130385237_130440406
WTC11_00075817	chr6	+	2376	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	85	0	85	0	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	131250243	131283532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131250617_131281529
WTC11_00075818	chr6	+	6767	1	FSM	ENSG00000289262.1	ENST00000691727.1	1354	1	1	-5414	1	5414	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGCGCATGAAACCGGCC	131292074	True	NA	46	True	NA	NA	NA	131294417	131301184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131294400_131301200
WTC11_00075825	chr6	+	2400	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	-98	3	-98	-3	multi-exon	FALSE	canonical	3	419	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901658	False	NA	116	True	AATAAA	-16	NA	131901864	131920562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131902152_131918449
WTC11_00075826	chr6	+	2588	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901790	False	NA	119	True	AATAAA	-19	NA	131901967	131920565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_131902152_131903946_131904235_131918449
WTC11_00075827	chr6	+	2491	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-87	-3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	73.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901669	False	NA	116	True	AATAAA	-16	NA	131901875	131920562	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131904132_131904235_131918449
WTC11_00075831	chr6	+	9970	2	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901785	False	NA	119	True	AATAAA	-19	NA	131901962	131920565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131910784
WTC11_00075832	chr6	+	8170	4	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_2	181.803923683365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901785	False	NA	119	True	AATAAA	-19	NA	131901962	131920565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131903946_131907674_131908942_131910956_131918324
WTC11_00075833	chr6	+	2681	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901822	False	NA	119	True	AATAAA	-19	NA	131901999	131920565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131903946_131904235_131918324
WTC11_00075834	chr6	+	15721	2	FSM	ENSG00000280058.1_ENSG00000236673.5	ENST00000419695.1	712	2	-1974	-13035	-289	0	multi-exon	FALSE	canonical	3	22	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901660	False	NA	119	True	AATAAA	-19	NA	131901673	131920565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131904235_131907405
WTC11_00075837	chr6	+	690	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	-51	0	51	multi-exon	FALSE	canonical	3	82	junction_3	3354.58281161756	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAAAATGTAATCATC	132736038	True	NA	65	True	AGTAAA	-17	NA	132814568	132817615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
WTC11_00075840	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	56.6237582645306	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	133949186	True	NA	10	True	AATAAA	-22	NA	133953223	133990432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
WTC11_00075843	chr6	+	3321	15	FSM	ENSG00000118513.20	ENST00000367814.8	3302	15	-20	1	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.71497246398453	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTCTCTTATT	135180927	True	NA	11	True	AATAAA	-22	NA	135181307	135219172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_135181537_135185902_135186021_135187833_135187906_135189790_135189884_135190126_135190348_135192323_135192559_135193837_135193919_135194355_135194461_135195747_135196003_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
WTC11_00075850	chr6	+	1961	2	FSM	ENSG00000182747.5	ENST00000331858.5	2343	2	350	32	350	-32	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTATTAAAGGATACATT	136922616	False	NA	NA	False	AATAAA	-10	NA	136922650	136925628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_136922868_136923884
WTC11_00075853	chr6	+	868	4	FSM	ENSG00000051620.11	ENST00000367697.7	844	4	-24	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	498.833528232505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAGTACTACTATTA	138404141	True	NA	34	True	AGTAAA	-20	NA	138404222	138413173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_138404598_138405144_138405281_138405970_138406034_138412879
WTC11_00075861	chr6	+	495	2	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	126	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGCAGTGGCTCATGCC	142017931	False	NA	NA	False	NA	NA	NA	142018330	142021785	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_142018356_142021315
WTC11_00075864	chr6	+	6987	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	4	0	-4	multi-exon	FALSE	canonical	3	1128	junction_3	75.4869903644708	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCTGTTCTATTATA	142137800	True	NA	NA	False	AATAAA	-12	NA	142147262	142224681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
WTC11_00075870	chr6	+	1007	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	-448	0	-43	0	multi-exon	FALSE	canonical	3	159	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	NA	False	NA	22	True	AATAAA	-27	NA	143060452	143061606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143061213
WTC11_00075871	chr6	+	1840	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	22	junction_5	80.3604725941526	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCCTGAACCTGAC	143060400	True	NA	-9	True	AATAAA	-4	NA	143060485	143340290	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
WTC11_00075873	chr6	+	2110	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	26	0	-26	multi-exon	FALSE	canonical	3	155	junction_5	23.3888862496699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAAATGCTAAAAATCT	143058864	True	NA	NA	False	AAAAAG	-29	NA	143060888	143341032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
WTC11_00075875	chr6	+	1753	6	Fusion	ENSG00000217648.1_ENSG00000146416.19	novel	3064	6	NA	NA	16	256	multi-exon	FALSE	canonical	2	3	junction_5	77.6608009229882	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGAATGCCCTCACTA	143058892	True	NA	16	True	AATAAA	-40	NA	143060916	143343639	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143342574
WTC11_00075901	chr6	+	4583	8	NIC	ENSG00000055208.19	novel	4363	7	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	34.524170769867	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATTTTGTGACTTGTT	149315602	True	NA	13	True	ATTAAA	-16	NA	149317640	149411607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_149318016_149342684_149342834_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
WTC11_00075902	chr6	+	4212	7	FSM	ENSG00000055208.19	ENST00000538427.5	4240	7	28	0	28	0	multi-exon	FALSE	canonical	3	10	junction_1	29.8407811932299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGACTTGTTTTCA	NA	False	NA	17	True	ATTAAA	-20	NA	149342684	149411611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149342834_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
WTC11_00075906	chr6	+	2017	8	FSM	ENSG00000120265.19	ENST00000367384.7	1938	8	-80	1	-80	0	multi-exon	FALSE	canonical	3	759	junction_7	375.391931240958	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	NA	False	NA	NA	False	AATAAA	-18	NA	149749362	149811419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802370_149810615
WTC11_00075907	chr6	+	1733	8	FSM	ENSG00000120265.19	ENST00000649295.1	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_7	502.892165988142	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
WTC11_00075908	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	749.536449339783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
WTC11_00075910	chr6	+	1330	5	FSM	ENSG00000131015.5	ENST00000367351.4	1335	5	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTACGGTGTTTAGA	149942000	True	NA	NA	False	AATAAA	-15	NA	149942013	149949230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149942158_149945308_149945573_149946371_149946654_149947319_149947452_149948722
WTC11_00075915	chr6	+	3474	28	FSM	ENSG00000120254.16	ENST00000367321.8	3451	28	-23	0	0	0	multi-exon	FALSE	canonical	3	188	junction_20	76.7300864904993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	150861412	True	NA	20	True	AATAAA	-20	NA	150865678	151101887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
WTC11_00075916	chr6	+	1049	8	FSM	ENSG00000120254.16	ENST00000367307.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	110.221113574265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150861449	True	NA	34	True	ATTAAA	-40	NA	150865715	150899021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
WTC11_00075924	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	820	junction_4	36.503424496888	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	151445292	True	NA	9	True	AATAAA	-18	NA	151452465	151470101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
WTC11_00075929	chr6	+	5186	20	NNC	ENSG00000213079.10	novel	5127	20	NA	NA	3	4	intron_retention	TRUE	canonical	3	21	junction_7	32.5105565638093	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGAAGTCGTGTAGTT	154733365	False	NA	NA	False	NA	NA	NA	154733380	154834248	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_154733931_154773988_154774073_154778000_154778046_154787860_154788023_154792822_154792977_154795008_154795140_154801970_154802148_154803546_154803624_154805368_154805487_154808069_154808202_154808685_154808799_154810014_154810209_154815715_154815817_154818478_154818593_154820176_154820334_154822275_154822410_154824233_154824379_154827171_154827241_154830921_154831141_154831938
WTC11_00075931	chr6	+	6094	27	FSM	ENSG00000146426.19	ENST00000682666.1	6094	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.9641393001943	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCATTGGCATTTGTA	154994280	True	NA	5	True	AGTAAA	-17	NA	154995314	155257723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_154995493_155090288_155090380_155127489_155127601_155129217_155130418_155137176_155137613_155144605_155144779_155148109_155148335_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
WTC11_00075933	chr6	+	10592	19	FSM	ENSG00000049618.24	ENST00000350026.10	7962	19	-995	-1635	-443	0	multi-exon	FALSE	canonical	3	67	junction_4	18.6603825401091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTGGTATTTGAGTG	NA	False	NA	NA	False	AATAAA	-45	NA	156776934	157210777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465_156935577_157084661_157084906_157110471_157110562_157133027_157133208_157148623_157148952_157167039_157167186_157174007_157174118_157180968_157181179_157184230_157184436_157189641_157189781_157190037_157190211_157196164_157196316_157198810_157198908_157200704_157201489_157203865_157203997_157206166
WTC11_00075939	chr6	+	6884	12	NIC	ENSG00000049618.24	novel	5284	14	NA	NA	1812	-4	intron_retention	FALSE	canonical	2	10	junction_1	30.1459260846989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAATCTGTTGGTATTTG	NA	False	NA	NA	False	AATAAA	-41	NA	157150722	157210773	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_157150854_157167039_157167186_157174007_157174118_157180968_157181179_157184230_157184436_157189641_157189781_157190037_157190211_157196164_157196316_157198810_157198908_157200704_157201489_157203865_157203997_157206166
WTC11_00075942	chr6	+	7334	9	FSM	ENSG00000175048.17	ENST00000359775.10	7334	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	10.5475115548645	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCCTTTATAAGGTAG	157380499	True	NA	NA	False	AATAAA	-26	NA	157381189	157678157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157382267_157542584_157542746_157592987_157593147_157628348_157628487_157632833_157632883_157645736_157645840_157647258_157647369_157653524_157653628_157672723
WTC11_00075943	chr6	+	4178	18	FSM	ENSG00000130340.17	ENST00000392185.8	4216	18	-538	576	-453	0	multi-exon	FALSE	canonical	3	289	junction_6	29.883858229803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	157822694	False	NA	2	True	AATAAA	-15	NA	157822707	157944501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
WTC11_00075948	chr6	+	4753	17	FSM	ENSG00000130340.17	ENST00000680974.1	4752	17	-1	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	30.6510093634777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTGTTTAAAAAAA	157817415	True	NA	-19	True	TATAAA	-41	NA	157823220	157944480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157938748_157940882_157940975_157942790
WTC11_00075949	chr6	+	7117	17	FSM	ENSG00000130340.17	ENST00000680089.1	7116	17	-1	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	30.6175373560644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	157817415	True	NA	2	True	AATAAA	-15	NA	157823220	157944501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
WTC11_00075950	chr6	+	3979	19	FSM	ENSG00000130340.17	ENST00000681651.1	3978	19	-1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	114.168234647248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAATTCTCAAAGCACT	157817415	True	NA	6	True	AATAAA	-19	NA	157823220	157944505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157876168_157876479_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
WTC11_00075951	chr6	+	5806	17	FSM	ENSG00000130340.17	ENST00000680464.1	5806	17	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	30.7987418574201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTCTCAAAGCACTTT	157817415	True	NA	8	True	AATAAA	-21	NA	157823220	157944507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157940975_157942790
WTC11_00075956	chr6	+	11318	14	FSM	ENSG00000130338.13	ENST00000367097.8	11318	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_13	17.1008148876738	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGCAGAATTCTTGA	158312454	False	NA	18	True	AATAAA	-19	NA	158312464	158511828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_158314269_158413064_158413194_158429735_158429898_158448995_158449177_158452133_158452269_158461562_158461730_158479750_158479976_158481054_158481290_158489587_158489733_158493572_158493718_158494752_158494847_158498668_158498813_158501677_158504179_158506577
WTC11_00075960	chr6	+	5118	17	FSM	ENSG00000146433.10	ENST00000684151.1	5103	17	-16	1	-16	0	multi-exon	TRUE	canonical	2	66	junction_14	17.7724330073291	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	158555862	True	NA	8	True	AATAAA	-13	NA	158560074	158635428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_158560233_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
WTC11_00075964	chr6	+	2788	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	-1166	1	247	0	multi-exon	FALSE	canonical	3	53	junction_6	181.217180936761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	159725831	159749415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
WTC11_00075965	chr6	+	2116	8	FSM	ENSG00000146457.16	ENST00000621533.5	2105	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	59	junction_6	161.111699115355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	159723379	False	NA	16	True	AATAAA	-23	NA	159727494	159756319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
WTC11_00075966	chr6	+	1644	6	FSM	ENSG00000146457.16	ENST00000337387.4	1622	6	-22	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	49.4246901861812	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	159718188	True	NA	9	True	ATTAAA	-14	NA	159727565	159749415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
WTC11_00075967	chr6	+	1430	7	FSM	ENSG00000146457.16	ENST00000631126.2	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	145.438895149208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	159718188	True	NA	15	True	ATTAAA	-20	NA	159727565	159749421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
WTC11_00075970	chr6	+	1017	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	210	junction_1	411.173929134618	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789590	False	NA	20	True	AATAAA	-20	NA	159789840	159798429	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
WTC11_00075972	chr6	+	977	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	-7	0	0	multi-exon	FALSE	canonical	3	804	junction_1	133.386656004265	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	159782322	True	NA	27	True	AATAAA	-27	NA	159790466	159798436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
WTC11_00075973	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	476.084026197057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	159782372	False	NA	27	True	AATAAA	-27	NA	159790516	159798436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
WTC11_00075979	chr6	+	3272	11	FSM	ENSG00000146477.6	ENST00000275300.3	3234	11	-38	0	-38	0	multi-exon	FALSE	canonical	1	6	junction_5	4.40454310910905	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATTTGCCCTTTCTCT	160348155	True	NA	6	True	ATTAAA	-19	NA	160348339	160452577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_160348849_160397978_160398083_160407040_160407196_160408752_160408922_160410728_160410847_160436779_160436878_160436996_160437212_160442760_160442870_160443629_160443743_160447718_160447819_160450995
WTC11_00075993	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	50.9757845672325	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	163410232	True	NA	11	True	ATTAAA	-20	NA	163414717	163578592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
WTC11_00076004	chr6	+	3646	12	NIC	ENSG00000213066.13	novel	1484	12	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	108.39810312146	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTGTGCTTTTATACT	166993295	True	NA	14	True	AATAAA	-25	NA	166999343	167042418	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024784_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
WTC11_00076007	chr6	+	4957	4	FSM	ENSG00000280707.3	ENST00000625787.3	980	4	-392	-3585	-310	0	multi-exon	FALSE	canonical	3	94	junction_3	498.442240050607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227877	False	NA	27	True	AATAAA	-16	NA	167227889	167237511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233242
WTC11_00076008	chr6	+	3715	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-310	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	516.294704817144	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227877	False	NA	27	True	AATAAA	-16	NA	167227889	167237511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231859_167231958_167232478_167232561_167234484
WTC11_00076010	chr6	+	948	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-270	2	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	38.19249489974	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTTTGTTGACAATC	167227917	False	NA	35	True	AATAAA	-24	NA	167227929	167237519	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167237240
WTC11_00076011	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	357.98448135204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214669	True	NA	27	True	AATAAA	-16	NA	167228299	167237511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
WTC11_00076012	chr6	+	465	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	101	7	1	-1	multi-exon	FALSE	canonical	3	226	junction_2	533.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGTTCTTTTTG	167214670	True	NA	26	True	AATAAA	-15	NA	167228300	167237510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231859_167231958_167237240
WTC11_00076013	chr6	+	649	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	308.109558436605	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGTTCTTTTTG	167214671	True	NA	26	True	AATAAA	-15	NA	167228301	167237510	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
WTC11_00076014	chr6	+	724	5	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	629	4	NA	NA	2	1531	multi-exon	FALSE	canonical	3	68	junction_4	55.517452210994	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATATTAATTGAATTGG	167214671	True	NA	7	True	AATAAA	-17	NA	167228301	167247447	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_167228398_167231204_167231308_167231859_167231958_167245786_167245834_167247067
WTC11_00076015	chr6	+	6738	4	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	629	4	NA	NA	-310	7236	multi-exon	FALSE	canonical	3	68	junction_3	544.252596584425	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTCAGCTATTTC	167227877	False	NA	NA	False	ATTAAA	-17	NA	167227889	167253152	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_167228398_167231859_167231958_167245786_167245834_167247067
WTC11_00076016	chr6	+	4400	4	FSM	ENSG00000280707.3	ENST00000685238.1	555	4	-271	-3574	-191	0	multi-exon	FALSE	canonical	3	109	junction_3	491.766882441942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227979	False	NA	27	True	AATAAA	-16	NA	167228008	167237511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233680
WTC11_00076020	chr6	+	7729	32	NIC	ENSG00000130396.21	novel	7593	34	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	32.2029529220391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCAGGCAGTGGTTTT	167821018	True	NA	32	True	ATTAAA	-20	NA	167826921	167972026	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167827238_167864550_167864747_167870385_167870499_167872216_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962432_167962568_167965756_167966046_167969113_167969199_167969781
WTC11_00076025	chr6	+	5999	15	FSM	ENSG00000130396.21	ENST00000511637.5	5999	15	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	18.6103986732018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTAGTTCCTGGCTCTC	167913527	False	NA	NA	False	AATATA	-22	NA	167913540	167965029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962432
WTC11_00076027	chr6	+	4686	13	FSM	ENSG00000130396.21	ENST00000485634.7	4686	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	58.8365792305735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGCTATTGTTTTGAA	167922924	False	NA	13	True	AATAAA	-19	NA	167922953	167971912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966271_167969113_167969199_167969781
WTC11_00076040	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_7	20.7451199080651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	170304521	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
WTC11_00076042	chr6	+	1872	8	FSM	ENSG00000112592.15	ENST00000392092.7	1857	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	266	junction_6	34.2797613879724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTTATACCTTGTA	170550648	True	NA	13	True	AATAAA	-21	NA	170554353	170572859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
WTC11_00076043	chr6	+	1892	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	-69	38	8	0	multi-exon	FALSE	canonical	3	107	junction_1	77.1730099800944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAATGCAGTTTATAAA	170550604	True	NA	-14	True	AATGAA	-41	NA	170554309	170572832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
WTC11_00076044	chr6	+	2265	8	NIC	ENSG00000112592.15	novel	1857	8	NA	NA	7	-44	intron_retention	FALSE	canonical	3	34	junction_5	101.195305206904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGCTGTACATATTTT	170550680	True	NA	-58	True	AATATA	-15	NA	170554385	170572788	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917_170567506_170569611_170569780_170571409_170571505_170572185
WTC11_00076047	chr6	-	4520	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	11	18	combination_of_known_splicesites	TRUE	canonical	2	12	junction_27	124.534372560268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCCTAAGTGT	-686573	True	NA	-2	True	AATAAA	-33	NA	693097	485135	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_657162_657251_693018
WTC11_00076048	chr6	-	4187	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	24	16	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_1	97.2586691482553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACATTTTTCCCTAAGT	-686560	True	NA	-4	True	AATAAA	-31	NA	693084	485137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_486404_486633_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
WTC11_00076049	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	FALSE	canonical	2	320	junction_17	61.0457113577315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-686615	True	NA	-20	True	AATAAA	-15	NA	693139	485153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
WTC11_00076051	chr6	-	283	1	FSM	ENSG00000188996.5	ENST00000380907.3	1162	1	817	62	817	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTATATTTTGTTGAGCC	NA	False	NA	-63	True	NA	NA	NA	656283	656000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_656000_656300
WTC11_00076052	chr6	-	1277	1	FSM	ENSG00000261730.1	ENST00000568244.1	1277	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTCCTCCAGCAT	NA	False	NA	NA	False	TATAAA	-21	NA	1385066	1383789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_1383800_1385100
WTC11_00076053	chr6	-	1665	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	24.0518190580255	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGTCAGTGTGGAT	-2240745	True	NA	-17	True	ATTAAA	-24	NA	2245605	1623805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
WTC11_00076054	chr6	-	2477	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	-1	0	1	multi-exon	FALSE	canonical	3	134	junction_6	9.15453742990631	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTCTCAGGCCTCTTCT	-2840417	True	NA	0	True	AATAAA	-25	NA	2841863	2832330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
WTC11_00076055	chr6	-	424	3	FSM	ENSG00000021355.13	ENST00000460260.1	580	3	156	0	142	0	multi-exon	FALSE	canonical	1	2	junction_2	74	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTTGCCCTTCAC	-2841696	False	NA	NA	False	AATAGA	-34	NA	2841706	2838548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2838687_2840418_2840595_2841596
WTC11_00076056	chr6	-	6418	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	-2275	0	2275	multi-exon	FALSE	canonical	3	370	junction_3	36.2950869035099	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATGTTTAAGAGCTGTT	-2890317	True	NA	-9	True	AATAAA	-17	NA	2903309	2884994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
WTC11_00076057	chr6	-	1770	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	-275	0	-244	0	multi-exon	FALSE	canonical	3	13	junction_6	92.3176882052164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2962352	False	NA	-1	True	AATAAA	-28	NA	2962383	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
WTC11_00076058	chr6	-	1370	7	FSM	ENSG00000124570.21	ENST00000380529.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	75.3539794717056	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971175	False	NA	-1	True	AATAAA	-28	NA	2971206	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971116
WTC11_00076059	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	73.5151156036786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971574	False	NA	-1	True	AATAAA	-28	NA	2971605	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
WTC11_00076060	chr6	-	1660	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	-345	0	-135	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971881	False	NA	-1	True	AATAAA	-28	NA	2971912	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
WTC11_00076061	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971098	True	NA	-1	True	AATAAA	-28	NA	2971585	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
WTC11_00076062	chr6	-	5624	7	FSM	ENSG00000124570.21	ENST00000644178.1	5620	7	0	-4	0	0	multi-exon	FALSE	canonical	3	3	junction_6	96.0138878843403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2970712	False	NA	-1	True	AATAAA	-28	NA	2970743	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2966399
WTC11_00076063	chr6	-	1903	8	FSM	ENSG00000124570.21	ENST00000616722.4	2036	8	141	-8	141	0	multi-exon	FALSE	canonical	1	1	junction_7	114.90581768899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTCCGTGTGTTTGTGT	NA	False	NA	-5	True	AATAAA	-24	NA	2972024	2948162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2968778_2968914_2971532
WTC11_00076065	chr6	-	1313	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	94.9047768379794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAAAGGGCCCATTT	-2971630	False	31	-38	True	NA	NA	NA	2971661	2948195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
WTC11_00076067	chr6	-	910	1	FSM	ENSG00000272277.1	ENST00000606441.1	850	1	-59	-1	-59	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTTGTTCAC	-3068753	True	NA	-7	True	AATAAA	-16	NA	3068953	3068043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3068000_3069000
WTC11_00076068	chr6	-	1652	5	NNC	ENSG00000137267.7	novel	1616	4	NA	NA	0	32214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.299019644015	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCATATTGTATGTTCA	-3136531	True	NA	NA	False	AAAAAG	-9	NA	3157544	3121282	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_3121319_3153665_3154924_3155624_3155736_3156043_3156153_3157406
WTC11_00076069	chr6	-	1645	5	NNC	ENSG00000137267.7	novel	1616	4	NA	NA	0	32208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.299019644015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTATTATCATATTGTA	-3136531	True	NA	NA	False	AAAAAG	-3	NA	3157544	3121288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_3121318_3153665_3154924_3155624_3155736_3156043_3156153_3157406
WTC11_00076070	chr6	-	1674	6	Fusion	ENSG00000137267.7_ENSG00000137285.11	novel	1922	4	NA	NA	0	32208	multi-exon	TRUE	non_canonical	0	0	junction_1	1373.98128080407	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTATTATCATATTGTA	-3171414	True	NA	NA	False	AAAAAG	-3	NA	3227653	3121288	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_3121318_3153665_3154679_3225566_3225812_3226158_3226270_3226560_3226670_3227486
WTC11_00076072	chr6	-	1912	3	FSM	ENSG00000137267.7	ENST00000679907.1	1912	3	0	0	0	0	multi-exon	FALSE	canonical	3	1519	junction_2	32	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-3136530	True	NA	-22	True	AATAAA	-7	NA	3157543	3153676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3154924_3155624_3156153_3157406
WTC11_00076073	chr6	-	2306	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	-22	0	0	multi-exon	FALSE	canonical	3	1495	junction_1	12	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-3136531	True	NA	-22	True	AATAAA	-7	NA	3157544	3153676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3155736_3156043_3156153_3157406
WTC11_00076074	chr6	-	2614	2	FSM	ENSG00000137267.7	ENST00000680967.1	2592	2	0	-22	0	0	multi-exon	FALSE	canonical	3	1519	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-3136531	True	NA	-22	True	AATAAA	-7	NA	3157544	3153676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3156153_3157406
WTC11_00076077	chr6	-	3695	3	FSM	ENSG00000137285.11	ENST00000680070.1	3695	3	0	0	0	0	multi-exon	FALSE	canonical	3	2789	junction_2	47	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGCTAGTTTCTCA	-3171417	True	NA	NA	False	GATAAA	-36	NA	3227656	3223323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158_3226270_3226560
WTC11_00076078	chr6	-	1923	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	-1	0	1	multi-exon	FALSE	canonical	3	2737	junction_3	60.4207469886517	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACTTGAAAGCACAGTG	-3171414	True	NA	-16	True	AATAAA	-17	NA	3227653	3224275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
WTC11_00076079	chr6	-	6634	10	FSM	ENSG00000137266.15	ENST00000406686.8	6634	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	11.1665284679121	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCTCCATAGCCCTG	-3455967	True	NA	-19	True	AATAAA	-15	NA	3457050	3268972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3273413_3283851_3283976_3285078_3285112_3286858_3287092_3289763_3289867_3298090_3298219_3323833_3324003_3410187_3410343_3415751_3415856_3455905
WTC11_00076080	chr6	-	1574	9	FSM	ENSG00000137266.15	ENST00000485307.5	1574	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	11.7732482773447	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAAAGAGCCTACCCC	-3455998	False	NA	NA	False	NA	NA	NA	3456043	3283464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3283976_3285078_3285112_3286858_3287092_3289763_3289867_3298090_3298219_3323833_3324003_3410187_3410343_3415751_3415856_3455905
WTC11_00076081	chr6	-	1571	4	FSM	ENSG00000137266.15	ENST00000380298.2	1574	4	0	3	0	-3	multi-exon	FALSE	canonical	3	123	junction_2	1.24721912892465	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCATGCTCGTGTGTTT	-3456514	False	NA	-6	True	AATAAA	-14	NA	3456559	3323344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3324003_3410187_3410343_3415751_3415856_3455905
WTC11_00076082	chr6	-	1895	5	FSM	ENSG00000168994.14	ENST00000380283.5	1878	5	0	-17	0	12	multi-exon	FALSE	canonical	3	16	junction_3	3.53553390593274	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGTATAAAGGCGTG	-3751698	False	89	1	True	AATAAA	-31	NA	3751713	3722601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3723737_3727550_3727663_3737078_3737197_3738056_3738149_3751275
WTC11_00076083	chr6	-	1378	11	NNC	ENSG00000198721.13	novel	1451	11	NA	NA	0	21288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.426525288079	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTATGTTGCCCAGG	-4125417	True	NA	NA	False	NA	NA	NA	4135573	4094404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4094431_4115709_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00076084	chr6	-	1583	11	NNC	ENSG00000198721.13	novel	1451	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	10	junction_10	262.483599487663	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	-4125417	True	NA	-7	True	AATAAA	-30	NA	4135573	4115692	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4134312_4134527_4135510
WTC11_00076085	chr6	-	1461	11	FSM	ENSG00000198721.13	ENST00000496241.6	1451	11	0	-10	0	3	multi-exon	FALSE	canonical	3	4	junction_7	257.847706989998	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTTGGTAGTAGAGAG	-4125435	True	NA	-4	True	AATAAA	-33	NA	4135591	4115689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130178_4130250_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00076086	chr6	-	1254	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	223.650396825045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125405	True	NA	-20	True	AATAAA	-17	NA	4135561	4115705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00076088	chr6	-	1383	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	-15	0	2	multi-exon	FALSE	canonical	3	341	junction_9	111.588529876507	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTTTGGTAGTAGAGA	-4125419	True	NA	-5	True	AATAAA	-32	NA	4135575	4115690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
WTC11_00076089	chr6	-	1396	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	-16	0	3	multi-exon	FALSE	canonical	3	302	junction_9	122.710137224998	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTTGGTAGTAGAGAG	-4125441	True	NA	-4	True	AATAAA	-33	NA	4135597	4115689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00076090	chr6	-	1121	8	NIC	ENSG00000198721.13	novel	1133	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	251.268130628195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTAAGAATTCACACAG	-4125408	True	NA	-22	True	AATAAA	-15	NA	4135564	4115707	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00076091	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	44.3395985547907	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-5003176	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
WTC11_00076092	chr6	-	1140	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	27	-111	0	109	multi-exon	FALSE	canonical	3	46	junction_3	73.1110266801269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGACCCATCTGTGATG	-5003175	True	NA	NA	False	NA	NA	NA	5004036	4994937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
WTC11_00076093	chr6	-	1093	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	-5	0	5	multi-exon	FALSE	canonical	3	16	junction_5	81.1521205309305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCTTTCAGATTTCTT	-5003175	True	NA	0	True	AATAAA	-29	NA	5004036	4995041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
WTC11_00076094	chr6	-	1166	6	NIC	ENSG00000124787.14	novel	1488	8	NA	NA	-4	-756	intron_retention	FALSE	canonical	3	138	junction_1	47.5209427515911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATCGCCTATTGCAAA	-5003161	True	NA	NA	False	AATAAA	-18	NA	5004022	4995833	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
WTC11_00076096	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	47	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-5256420	True	NA	-7	True	AATAAA	-22	NA	5260950	5108418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5109492_5216617_5216739_5260647
WTC11_00076097	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	315.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	-5260632	False	NA	-3	True	AATAAA	-17	NA	5260737	5186599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5186981_5216617_5216739_5260647
WTC11_00076098	chr6	-	496	1	FSM	ENSG00000261211.2	ENST00000563225.2	6640	1	4551	1593	4533	-1575	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGACCAAAATATATT	-6682348	False	NA	NA	False	GATAAA	-4	NA	6682397	6681901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6681900_6682400
WTC11_00076099	chr6	-	10816	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	-1155	0	1155	multi-exon	FALSE	canonical	3	685	junction_4	13.3920475945805	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAAATTTATCTGAGC	-7300273	True	NA	NA	False	AATAAA	-5	NA	7313199	7279987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
WTC11_00076101	chr6	-	909	7	FSM	ENSG00000124783.14	ENST00000462112.1	1094	7	0	185	0	-185	multi-exon	FALSE	canonical	1	4	junction_1	260.753661953619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTTTGTAGAGACAG	-7300262	True	NA	NA	False	NA	NA	NA	7313188	7297067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7297210_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
WTC11_00076102	chr6	-	819	1	FSM	ENSG00000220472.1	ENST00000407940.1	730	1	0	-89	0	89	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATACAGTGGACTTTG	-7339551	False	NA	NA	False	TATAAA	-28	NA	7339568	7338749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7338700_7339600
WTC11_00076103	chr6	-	2614	4	FSM	ENSG00000239264.9	ENST00000460138.5	2704	4	92	-2	92	2	multi-exon	FALSE	canonical	3	1137	junction_1	107.854840719676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTCCTTCAATGTT	-7889324	False	NA	-1	True	AATAAA	-19	NA	7889353	7881514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704
WTC11_00076104	chr6	-	3118	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	-188	-1629	-188	2	multi-exon	FALSE	canonical	3	286	junction_9	305.886971782345	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTCCTTCAATGTT	-7910251	False	NA	-1	True	AATAAA	-19	NA	7910265	7881514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
WTC11_00076105	chr6	-	2940	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	-2	0	2	multi-exon	FALSE	canonical	3	1137	junction_1	117.387403366527	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTCCTTCAATGTT	-7895091	True	NA	-1	True	AATAAA	-19	NA	7910788	7881514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
WTC11_00076106	chr6	-	3037	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_9	495.681097077546	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTCCTTCAATGTT	-8059357	True	NA	-1	True	AATAAA	-19	NA	8064364	7881514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
WTC11_00076107	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	34.2810078614967	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-8059382	True	NA	-1	True	AATAAA	-13	NA	8064389	8013566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
WTC11_00076113	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1549	junction_1	189.436591560929	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-8081972	True	NA	-2	True	AGTAAA	-17	NA	8102548	8079394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
WTC11_00076114	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	118	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-8081983	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8090282_8097266_8097468_8102434
WTC11_00076117	chr6	-	1888	12	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	0	15696	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.5070502407958	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTTGATTTTTTTTTT	-8432296	True	NA	NA	False	NA	NA	NA	8435483	8395738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8395758_8413069_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
WTC11_00076120	chr6	-	2137	11	FSM	ENSG00000124786.12	ENST00000379660.4	2137	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	32.5668543153925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432296	True	NA	-1	True	AATAAA	-24	NA	8435483	8413067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435076
WTC11_00076121	chr6	-	3995	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	-7	0	7	multi-exon	FALSE	canonical	2	5	junction_2	5.22943006220661	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGTTTTATTTGGTTCA	-11044259	False	NA	NA	False	AATAAA	-25	NA	11044305	10980751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
WTC11_00076122	chr6	-	4523	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_5	6.04841577054135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGGTTTTCTTTTTCA	-11230890	True	NA	-2	True	ATTAAA	-24	NA	11232668	11183296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
WTC11_00076123	chr6	-	571	2	FSM	ENSG00000111859.17	ENST00000505589.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAAAGGGATGGTGT	NA	False	NA	NA	False	NA	NA	NA	11192567	11190857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11191206_11192344
WTC11_00076124	chr6	-	2330	1	FSM	ENSG00000272379.1	ENST00000606393.1	473	1	6	-1863	6	1863	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-24	NA	13290484	13288154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13288200_13290500
WTC11_00076125	chr6	-	1338	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	261.067979261951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13322690	False	NA	0	True	AATAAA	-16	NA	13328130	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13327832
WTC11_00076126	chr6	-	1276	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	248.327795217432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323054	True	NA	0	True	AATAAA	-16	NA	13328494	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
WTC11_00076127	chr6	-	1180	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	256.761670729016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323076	True	NA	0	True	AATAAA	-16	NA	13328516	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
WTC11_00076128	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.376388884492	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
WTC11_00076129	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	234.611793986473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323097	True	NA	0	True	AATAAA	-16	NA	13328537	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
WTC11_00076130	chr6	-	1253	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	230.975835824213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323091	True	NA	-3	True	AATAAA	-13	NA	13328531	13304953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
WTC11_00076133	chr6	-	1056	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	28	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	245.633025738261	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323115	True	NA	-3	True	AATAAA	-13	NA	13328555	13304953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
WTC11_00076134	chr6	-	1170	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.957618948954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTGGTGTTGCTG	-13323091	True	NA	-5	True	AATAAA	-11	NA	13328531	13304955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
WTC11_00076144	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	-13486906	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13365663_13486637
WTC11_00076145	chr6	-	3513	14	FSM	ENSG00000010017.13	ENST00000011619.6	3384	14	-129	0	-129	0	multi-exon	TRUE	canonical	3	49	junction_12	17.7547393456161	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGTCAATTGAGTTTA	-13711950	False	NA	-6	True	ATTAAA	-17	NA	13711964	13621497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13622493_13625652_13625765_13632369_13632522_13634430_13634553_13637807_13637956_13639562_13639754_13641198_13641308_13642478_13642592_13644544_13644730_13652658_13652682_13657108_13657277_13658779_13658833_13696784_13696897_13710934
WTC11_00076147	chr6	-	1266	10	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	0	11768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.719500546448	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATAAAAAAGTTGAAG	-13814522	False	NA	NA	False	NA	NA	NA	13814568	13774788	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13774818_13790790_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
WTC11_00076148	chr6	-	5479	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	-8	0	8	multi-exon	FALSE	canonical	3	391	junction_1	33.7305499510459	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTCATCATTCAAAAGAA	-13814522	False	NA	3	True	AATAAA	-24	NA	13814568	13786548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
WTC11_00076149	chr6	-	2722	9	NIC	ENSG00000050393.12	novel	5460	9	NA	NA	394	-184	intron_retention	FALSE	canonical	2	7	junction_1	152.216129237345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATTCTGTGTGACT	-13811759	True	NA	-8	True	AATAAA	-24	NA	13814163	13786740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13788705_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
WTC11_00076151	chr6	-	5328	3	FSM	ENSG00000226673.2	ENST00000635227.1	776	3	-1631	-2921	-1631	0	multi-exon	FALSE	canonical	3	18	junction_2	32	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	-14287024	False	NA	-3	True	AATAAA	-19	NA	14287085	14280126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_14283189_14283944_14284181_14285055
WTC11_00076152	chr6	-	3995	3	NNC	ENSG00000226673.2	novel	776	3	NA	NA	-289	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGGTCGTGGTCATTC	-14285699	False	NA	-5	True	AATAAA	-17	NA	14285743	14280128	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14283189_14283944_14284181_14285044
WTC11_00076153	chr6	-	3602	3	NNC	ENSG00000226673.2	novel	776	3	NA	NA	-289	-2	intron_retention	FALSE	canonical	3	21	junction_1	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGGTCGTGGTCATTC	-14285699	False	NA	-5	True	AATAAA	-17	NA	14285743	14280128	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14281152_14282408_14283189_14283944
WTC11_00076154	chr6	-	3208	4	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_2	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTTATTGGTGCGTG	-14301240	False	NA	-30	True	AATAAA	-14	NA	14301250	14290586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14292326_14292999_14293297_14295304_14295384_14300157
WTC11_00076155	chr6	-	3043	3	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTTATTGGTGCGTG	-14301393	True	NA	-30	True	AATAAA	-14	NA	14302483	14290586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14293297_14295304_14295384_14302229
WTC11_00076156	chr6	-	658	2	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-14302458	False	NA	-1	True	ATTAAA	-17	NA	14302468	14296981	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14297401_14302229
WTC11_00076158	chr6	-	1356	3	NNC	ENSG00000234261.5	novel	1017	4	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	3.5	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCTGAGGGGTTTT	-15020696	True	NA	0	True	AATAAA	-17	NA	15022002	14976208	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14977319_14997415_14997476_15021816
WTC11_00076160	chr6	-	1078	1	FSM	ENSG00000271888.1	ENST00000607711.1	1078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTATTATTTTTACC	-15244800	False	NA	1	True	AATAAA	-20	NA	15245000	15243922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15243900_15245000
WTC11_00076161	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_2	44.7735040695573	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661701	True	NA	-5	True	AATAAA	-17	NA	15663028	15522806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
WTC11_00076162	chr6	-	1412	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	-8	0	5	multi-exon	TRUE	canonical	1	3	junction_8	66.0029928240258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCACAGAGCTAGTTTGT	-15661680	True	NA	0	True	AATAAA	-22	NA	15663007	15522801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
WTC11_00076166	chr6	-	1026	2	FSM	ENSG00000282024.1	ENST00000632346.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGCCCGCCTGCACCC	-16262819	False	NA	NA	False	TATAAA	-41	NA	16262926	16259100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_16259377_16262176
WTC11_00076167	chr6	-	587	6	FSM	ENSG00000124788.19	ENST00000675689.1	1464	6	0	877	0	-854	multi-exon	FALSE	canonical	1	2	junction_2	1.16619037896906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACGCAGTGAATGTTGTA	-16760059	False	282	NA	False	NA	NA	NA	16760091	16485988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_16486110_16522626_16522689_16585779_16585908_16657775_16657902_16753232_16753348_16760056
WTC11_00076169	chr6	-	616	1	FSM	ENSG00000184612.8	ENST00000333817.7	754	1	153	-15	153	15	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTATTTTTCTAAGCTG	NA	False	NA	NA	False	AATGAA	-15	NA	17531499	17530883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17530900_17531500
WTC11_00076170	chr6	-	5961	23	NNC	ENSG00000124789.12	novel	6030	23	NA	NA	0	64640	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74.0461660772778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGGTAGTTCAAGGTC	-17701643	True	NA	NA	False	NA	NA	NA	17706834	17550394	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_17550423_17615038_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17668974_17669029_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
WTC11_00076171	chr6	-	6345	21	NIC	ENSG00000124789.12	novel	6026	22	NA	NA	-41	330	combination_of_known_splicesites	FALSE	canonical	3	29	junction_14	70.1698653269336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAACTACAGTTGTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	17706966	17614704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
WTC11_00076173	chr6	-	6028	22	FSM	ENSG00000124789.12	ENST00000262077.3	6026	22	0	-2	0	0	multi-exon	FALSE	canonical	3	229	junction_14	38.8786705072095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTAGTTTTACCTC	-17701734	True	NA	-9	True	AATAAA	-16	NA	17706925	17615034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17668974_17669029_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
WTC11_00076174	chr6	-	5478	20	NIC	ENSG00000124789.12	novel	6026	22	NA	NA	277	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	97.4962745221907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCTAGTTTTACC	-17706529	False	NA	-11	True	AATAAA	-14	NA	17706557	17615036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
WTC11_00076175	chr6	-	5675	37	NNC	ENSG00000137177.20	novel	6007	39	NA	NA	-80983	1903	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.84640633056986	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	17898183	17757279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_17757304_17763694_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167
WTC11_00076176	chr6	-	4009	16	FSM	ENSG00000137177.20	ENST00000502297.5	4009	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	3.44222150491349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAACACTAATCATT	-17794687	False	NA	-30	True	AATACA	-16	NA	17794697	17759253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17760878_17764154_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571
WTC11_00076178	chr6	-	1332	3	FSM	ENSG00000137177.20	ENST00000502704.2	1330	3	0	-2	0	2	multi-exon	FALSE	canonical	3	37	junction_1	9.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCATTATATT	-17985991	True	NA	0	True	AATAAA	-19	NA	17987623	17950403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17951430_17987053_17987145_17987408
WTC11_00076179	chr6	-	2258	1	FSM	ENSG00000187566.6	ENST00000340650.6	2238	1	-54	34	-54	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTCTCCACTATACAAA	-18122585	True	NA	1	True	ATTAAA	-27	NA	18122731	18120473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18120500_18122700
WTC11_00076180	chr6	-	3185	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	-1	0	1	multi-exon	FALSE	canonical	3	247	junction_8	32.4489984437116	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTTTCATTTTATT	-18148309	True	NA	1	True	ATTAAA	-25	NA	18155077	18128309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
WTC11_00076181	chr6	-	1121	8	NIC	ENSG00000137364.5	novel	3184	9	NA	NA	16	-2002	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	107.681692681604	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATTTATTTTGTTTTA	-18148293	True	NA	-10	True	ATTAAA	-20	NA	18155061	18130312	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_18130781_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
WTC11_00076182	chr6	-	2850	12	NNC	ENSG00000124795.17	novel	3142	11	NA	NA	0	15233	intron_retention	FALSE	non_canonical	0	0	junction_1	481.918480126674	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-18232389	True	NA	NA	False	NA	NA	NA	18264524	18208626	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18208662_18224180_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
WTC11_00076183	chr6	-	2935	4	FSM	ENSG00000124795.17	ENST00000652292.1	3954	4	1348	-329	1348	-2	multi-exon	FALSE	canonical	3	66	junction_3	787.53723016051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTACATGTGAAAGT	-18244522	False	NA	-7	True	ATTAAA	-21	NA	18244776	18223861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18226243_18236451_18236601_18237380_18237517_18244507
WTC11_00076184	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_10	101.068541099592	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-18232395	True	NA	-5	True	ATTAAA	-23	NA	18264530	18223859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
WTC11_00076185	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1568	junction_4	72.7513947089591	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	-18264148	False	32135	-62	True	ACTAAA	-40	NA	18264208	18224216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
WTC11_00076187	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	504.873092964955	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	-18264207	False	NA	NA	False	NA	NA	NA	18264267	18225665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
WTC11_00076189	chr6	-	401	1	FSM	ENSG00000217414.2	ENST00000404856.2	2007	1	668	938	668	-938	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATGCTCTTTTCTGCC	NA	False	NA	NA	False	ATTAAA	-33	NA	18364755	18364354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18364400_18364800
WTC11_00076190	chr6	-	1014	3	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_2	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCGCATGAAAACCCATG	NA	False	NA	NA	False	NA	NA	NA	18759856	18754154	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754542_18757252_18757355_18759331
WTC11_00076191	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.56224173112709	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20211350	True	NA	0	True	AATAAA	-42	NA	20212469	20099683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
WTC11_00076192	chr6	-	335	2	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACATTAGAATCACCT	-21367130	True	NA	NA	False	NA	NA	NA	21367148	21361488	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_21361559_21366883
WTC11_00076193	chr6	-	3309	3	FSM	ENSG00000146038.12	ENST00000378450.6	3684	3	201	174	201	-174	multi-exon	FALSE	canonical	3	8	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTAATATGTTAATT	NA	False	NA	NA	False	NA	NA	NA	24205102	24171929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24174835_24178329_24178633_24205001
WTC11_00076194	chr6	-	234	2	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCCGTCTCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24291746	24290020	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_24290226_24291717
WTC11_00076195	chr6	-	5709	25	FSM	ENSG00000112293.15	ENST00000230036.2	5790	25	81	0	74	0	multi-exon	FALSE	canonical	2	4	junction_8	2.58198889747161	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTAGTGCTGCTTAACA	-24489484	False	NA	NA	False	AATAAA	-19	NA	24489497	24425831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24429119_24433186_24433238_24433362_24433390_24436575_24436737_24437112_24437290_24445545_24445640_24445725_24445832_24446837_24446980_24447876_24448034_24448133_24448209_24449788_24449900_24454014_24454202_24456497_24456638_24460278_24460400_24462729_24462796_24466679_24466820_24466911_24466940_24467166_24467275_24472581_24472637_24473618_24473668_24475120_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414
WTC11_00076196	chr6	-	1030	11	FSM	ENSG00000112293.15	ENST00000474784.5	1030	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	2.24499443206436	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATGGGACCAGGTGA	-24495192	False	NA	NA	False	NA	NA	NA	24495205	24466695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24466820_24466911_24466940_24467166_24467275_24472581_24472637_24473618_24473668_24475120_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414_24489498_24494966
WTC11_00076197	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	64.4663995168543	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-24659663	True	NA	-9	True	AATAAA	-15	NA	24666899	24649978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
WTC11_00076199	chr6	-	1039	1	FSM	ENSG00000272345.1	ENST00000607014.1	887	1	0	-152	0	152	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGAAAGGTGGATCTG	-24701774	False	NA	NA	False	NA	NA	NA	24701793	24700754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24700800_24701800
WTC11_00076200	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_2	77.5145147698158	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	-24719133	False	NA	-12	True	AATAAA	-41	NA	24719154	24704860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
WTC11_00076201	chr6	-	5295	22	FSM	ENSG00000111913.20	ENST00000643898.2	5295	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	16.8074327581094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGCAGTCTGATGTTA	-24935040	True	NA	-2	True	AATAAA	-23	NA	24935960	24804283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24806474_24809716_24809808_24818541_24818626_24825225_24825429_24828136_24828296_24830508_24830671_24832255_24832392_24835702_24835872_24839090_24839273_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
WTC11_00076203	chr6	-	3297	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	-56	-537	-44	0	multi-exon	FALSE	canonical	3	15	junction_1	9.69963093301422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTCTTTTTTGGATAT	-24935084	True	NA	NA	False	NA	NA	NA	24936004	24839441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
WTC11_00076205	chr6	-	787	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	-1	-275	-1	275	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCTTACTAGGCATTTT	-25972232	True	NA	NA	False	TTTAAA	-43	NA	26032100	26031313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26031300_26032100
WTC11_00076206	chr6	-	1091	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	100	-664	100	664	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATCGTCTCCAATAT	-25993623	False	NA	NA	False	AATAAA	-16	NA	26033518	26032427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26032400_26033500
WTC11_00076207	chr6	-	778	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	-5	-42	-5	42	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTGTTCTGCCCTGT	-25992208	False	NA	0	True	AATAAA	-29	NA	26056475	26055697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26055700_26056500
WTC11_00076208	chr6	-	2378	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	-16	-1703	0	1703	multi-exon	FALSE	canonical	3	33	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTATGTTTACTTTT	-25979560	True	NA	-8	True	AATAAA	-16	NA	26123926	26113169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26115136_26123514
WTC11_00076210	chr6	-	556	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	2	-155	2	155	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCCCATGCTGGAGTAA	-26102102	True	NA	4	True	ATTAAA	-21	NA	26189110	26188554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26188600_26189100
WTC11_00076211	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-26170692	True	NA	0	True	TATAAA	-18	NA	26199293	26196753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26197267_26198858
WTC11_00076212	chr6	-	1694	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	8	-1213	8	1213	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTACCCCAGCTACTTC	-26202776	True	NA	NA	False	ACTAAA	-36	NA	26216680	26214986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26215000_26216700
WTC11_00076213	chr6	-	217	1	FSM	ENSG00000124575.7	ENST00000244534.7	776	1	25	534	25	-534	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGCGCTTGCGGCTG	-26141100	True	NA	NA	False	NA	NA	NA	26234962	26234745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26234700_26235000
WTC11_00076214	chr6	-	462	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	25	7	25	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACCAACAATTTCAGTT	-26215399	True	NA	-9	True	NA	NA	NA	26250610	26250148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26250100_26250600
WTC11_00076215	chr6	-	2411	1	FSM	ENSG00000273983.2	ENST00000614378.2	496	1	-402	-1513	-402	1513	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTTCAATAACAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	26271815	26269404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26269400_26271800
WTC11_00076216	chr6	-	3051	2	Genic_Genomic	ENSG00000218690.2_ENSG00000273983.2	novel	496	1	NA	NA	19	1598	multi-exon	FALSE	canonical	2	35	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCACTGCCTAGACAAAG	NA	False	NA	NA	False	AATGAA	-21	NA	26272682	26269319	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_26271836_26272147
WTC11_00076217	chr6	-	681	1	FSM	ENSG00000218690.2	ENST00000635537.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAATATCATCAATAGG	NA	False	NA	NA	False	NA	NA	NA	26272701	26272020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26272000_26272700
WTC11_00076218	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-26169771	True	NA	-8	True	AATAAA	-31	NA	26285534	26281054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26281588_26285033
WTC11_00076219	chr6	-	4769	5	NNC	ENSG00000181315.11	novel	572	5	NA	NA	0	7081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.687178570484	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAAGAAAGACCTAG	-26657785	True	NA	NA	False	NA	NA	NA	26659689	26627301	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_26627329_26634394_26638729_26643658_26643729_26658557_26658647_26659440
WTC11_00076220	chr6	-	4810	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	1	0	-1	multi-exon	FALSE	canonical	3	110	junction_2	11.0855260988773	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTCTCCACTGTACT	-26657842	True	NA	-1	True	AATAAA	-21	NA	26659746	26634383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
WTC11_00076221	chr6	-	1466	5	FSM	ENSG00000241549.8	ENST00000463434.5	1457	5	0	-9	0	9	multi-exon	FALSE	canonical	3	9	junction_1	10.9658560997307	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCAAAGACAATAAGATC	NA	False	NA	NA	False	AAAAAG	-7	NA	26925213	26877911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119
WTC11_00076222	chr6	-	1346	1	FSM	ENSG00000287966.1	ENST00000661000.1	1346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGTGTGTATAAACTAT	-27020066	True	NA	NA	False	NA	NA	NA	27020280	27018934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27018900_27020300
WTC11_00076223	chr6	-	1354	1	FSM	ENSG00000272468.1	ENST00000607175.1	565	1	-791	2	-791	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAATTGTTGCTTTGTC	-27104178	False	NA	-5	True	AATAAA	-14	NA	27124012	27122658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27122700_27124000
WTC11_00076226	chr6	-	655	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	-247	0	0	0	multi-exon	TRUE	canonical	2	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112961	True	NA	-14	True	TATAAA	-15	NA	27132795	27126078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27126463_27132524
WTC11_00076227	chr6	-	1032	3	NNC	ENSG00000124635.9	novel	408	2	NA	NA	3	60	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAGAAGATGAAAAACAAAT	-27112958	True	NA	48	True	NA	NA	NA	27132792	27125836	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_27126463_27127263_27127402_27132524
WTC11_00076229	chr6	-	824	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	12	8068	multi-exon	FALSE	canonical	3	121	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-27117220	True	NA	-26	True	AATAAA	-21	NA	27146843	27138292	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_27138682_27146408
WTC11_00076230	chr6	-	2404	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-434	-367	13	mono-exon	FALSE	NA	NA	NA	NA	NA	1330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTAGCTGTTTATTA	NA	False	NA	-4	True	AATAAA	-19	NA	27360221	27357817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27357800_27360200
WTC11_00076231	chr6	-	3422	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	-29	1303	4	11	multi-exon	FALSE	canonical	3	30	junction_4	34.3074335968169	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCATGTAGCTGTTTAT	-27373451	True	NA	-6	True	AATAAA	-17	NA	27375260	27357819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
WTC11_00076232	chr6	-	2783	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	5	1376	5	4	multi-exon	FALSE	canonical	3	60	junction_4	21.4650879336657	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCACGTGTCATGTAGC	-27375254	False	NA	-13	True	AATAAA	-10	NA	27375272	27357826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
WTC11_00076233	chr6	-	3327	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	1	0	-1	multi-exon	TRUE	canonical	3	40	junction_5	8.89044430835715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGTCTGTTTTTAATA	-27472725	False	NA	-5	True	ATTAAA	-17	NA	27473105	27450747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
WTC11_00076235	chr6	-	523	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	4	-76	4	76	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATTAATCTAGCTCTT	-27807481	False	118428	NA	False	CATAAA	-17	NA	27807925	27807402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27807400_27807900
WTC11_00076236	chr6	-	599	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	10	-133	10	133	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAATGTAGATACTAACAA	-27814323	False	NA	69	True	NA	NA	NA	27814767	27814168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27814200_27814800
WTC11_00076237	chr6	-	670	2	Genic_Genomic	ENSG00000273542.2	novel	387	1	NA	NA	0	2032	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACCTCAACCCAAGAT	-27817602	False	NA	NA	False	AATAAA	-18	NA	27831560	27829141	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_27829319_27831067
WTC11_00076238	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	-27817602	False	NA	NA	False	NA	NA	NA	27831560	27831173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27831200_27831600
WTC11_00076239	chr6	-	794	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAGACCTCTAAAAAATG	-27752832	True	NA	NA	False	NA	NA	NA	27867588	27866794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27866800_27867600
WTC11_00076240	chr6	-	527	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	21	-46	21	46	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTAAATACAAGCTGTG	-27788578	False	NA	NA	False	NA	NA	NA	27872325	27871798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27871800_27872300
WTC11_00076241	chr6	-	678	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	-166	0	166	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGTCTCACTTTCTCC	-27890814	False	154151	NA	False	NA	NA	NA	27890826	27890148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27890100_27890800
WTC11_00076243	chr6	-	2802	2	FSM	ENSG00000269293.4	ENST00000667674.1	3533	2	0	731	0	-731	multi-exon	FALSE	canonical	3	61	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGCTGAACACCAGA	-28136519	True	NA	NA	False	NA	NA	NA	28136847	28120512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28123212_28136744
WTC11_00076245	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	4.47213595499958	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-28251784	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
WTC11_00076247	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.87400787401181	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335845	True	NA	3	True	AATAAA	-30	NA	28336148	28324736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
WTC11_00076250	chr6	-	2861	3	NNC	ENSG00000158691.15	novel	3909	6	NA	NA	16068	125	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	10	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATGATGTGTTATTTT	-28383642	False	NA	-8	True	AATAAA	-8	NA	28383663	28378829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28380872_28382190_28382610_28383263
WTC11_00076251	chr6	-	7727	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	1	-17	1	17	multi-exon	FALSE	canonical	3	28	junction_1	4.49691252107735	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAATTTGTATTTTACA	-28398690	True	NA	11	True	TATAAA	-31	NA	28399746	28384720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
WTC11_00076252	chr6	-	4611	3	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	11	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACATTTCCCCTGAT	NA	False	NA	-18	True	AATAAA	-17	NA	28426715	28421404	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_28423841_28424342_28426406_28426603
WTC11_00076253	chr6	-	401	2	FSM	ENSG00000287804.2	ENST00000689665.1	413	2	12	0	12	0	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTCTTTCTGGGTG	-28489154	True	NA	2	True	ATTAAA	-18	NA	28489481	28485428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28485712_28489363
WTC11_00076254	chr6	-	5945	4	FSM	ENSG00000232040.4	ENST00000452236.3	5935	4	0	-10	0	10	multi-exon	FALSE	canonical	3	17	junction_1	5.71547606649408	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTTTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	28587298	28570524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28573828_28574643_28576137_28579271_28579420_28586297
WTC11_00076255	chr6	-	395	1	FSM	ENSG00000235559.1	ENST00000440030.1	372	1	45	-68	45	68	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTTCCCCAATAAGAACA	NA	False	NA	NA	False	NA	NA	NA	28783959	28783564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28783600_28784000
WTC11_00076256	chr6	-	1305	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	84	1	84	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTTCTAATCATTG	NA	False	NA	-1	True	AATATA	-20	NA	28838974	28837240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28838321_28838749
WTC11_00076257	chr6	-	7006	6	FSM	ENSG00000204713.11	ENST00000481474.5	7006	6	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_3	31.5569326773056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28923913	28903001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
WTC11_00076258	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_5	28.6847751696019	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28923985	28903001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
WTC11_00076259	chr6	-	741	3	FSM	ENSG00000204713.11	ENST00000498117.1	728	3	0	-13	0	13	multi-exon	FALSE	canonical	3	476	junction_1	28	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACATAATTACTGATGAG	-28921944	False	NA	NA	False	AATAAA	-28	NA	28921976	28911293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28911719_28920011_28920243_28921891
WTC11_00076261	chr6	-	2799	7	FSM	ENSG00000197935.7	ENST00000377179.4	2782	7	0	-17	0	14	multi-exon	FALSE	canonical	2	8	junction_1	3.67045259092421	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTCTAAGGGATTTACA	NA	False	NA	4	True	AATAAA	-30	NA	29005315	28994770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28996587_28998733_28998839_28999486_28999614_28999955_29000048_29003512_29003595_29003945_29004215_29005007
WTC11_00076262	chr6	-	5289	17	ISM	ENSG00000204681.11	ENST00000472823.5	4286	21	5079	-1329	0	1329	3prime_fragment	FALSE	canonical	3	131	junction_13	25.4016947023225	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAGAAACAA	-29627389	False	NA	NA	False	NA	NA	NA	29628052	29600898	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
WTC11_00076263	chr6	-	4111	18	FSM	ENSG00000204681.11	ENST00000377012.8	4104	18	0	-7	0	0	multi-exon	FALSE	canonical	3	16	junction_9	54.3000761500036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	-29627389	False	NA	-1	True	AATAAA	-24	NA	29628052	29602227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
WTC11_00076266	chr6	-	4535	23	FSM	ENSG00000204681.11	ENST00000377034.9	4525	23	0	-10	0	0	multi-exon	TRUE	canonical	3	8	junction_19	66.0219879476677	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	NA	False	NA	-1	True	AATAAA	-24	NA	29633183	29602227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29630644_29631395_29631600_29632300_29632386_29632849
WTC11_00076278	chr6	-	284	1	FSM	ENSG00000235238.1	ENST00000445436.1	284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAACCTGCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	29636343	29636059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29636100_29636300
WTC11_00076279	chr6	-	2093	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	-11	0	11	multi-exon	FALSE	canonical	3	16	junction_4	8.38152730712011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTTTTCCTGAGGA	NA	False	NA	7	True	AATAAA	-28	NA	29681152	29672471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
WTC11_00076280	chr6	-	1597	4	FSM	ENSG00000204644.10	ENST00000488757.6	1599	4	3	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_3	9.80929264637478	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTTTGTGTTTAGTT	NA	False	NA	-3	True	AATAAA	-18	NA	29681152	29672481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29681061
WTC11_00076281	chr6	-	475	1	FSM	ENSG00000239257.1	ENST00000428990.1	471	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGCTGGCTAGTTCCA	NA	False	NA	-66	True	NA	NA	NA	29727139	29726664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29726700_29727100
WTC11_00076285	chr6	-	527	1	FSM	ENSG00000237669.1	ENST00000458060.1	996	1	315	154	315	-154	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGAGTCTTGGTCCAG	NA	False	NA	NA	False	NA	NA	NA	30006801	30006274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30006300_30006800
WTC11_00076289	chr6	-	3527	10	FSM	ENSG00000234127.9	ENST00000454678.7	3518	10	0	-9	0	9	multi-exon	TRUE	canonical	3	8	junction_7	35.4769965463625	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATTTGTAGGTCTA	-30212009	True	NA	NA	False	AATAAA	-25	NA	30213406	30184445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199265_30201034_30201139_30204655_30204766_30213304
WTC11_00076290	chr6	-	3327	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	-9	0	9	multi-exon	FALSE	canonical	3	27	junction_8	31.3446067928759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATTTGTAGGTCTA	-30212030	True	NA	NA	False	AATAAA	-25	NA	30213427	30184445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
WTC11_00076293	chr6	-	7243	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	-13	0	0	multi-exon	FALSE	canonical	3	108	junction_3	86.821656284593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30327086	30286689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
WTC11_00076295	chr6	-	7030	5	FSM	ENSG00000231074.10	ENST00000657247.1	7011	5	0	-19	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.332256745609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326868	30286727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30291536_30294965_30296131_30296238_30314268_30314483_30326353
WTC11_00076296	chr6	-	4948	5	FSM	ENSG00000231074.10	ENST00000666294.1	4929	5	0	-19	0	0	multi-exon	FALSE	canonical	2	4	junction_1	123.41089903246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326871	30286727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30291536_30292600_30294470_30294965_30296131_30296238_30326353
WTC11_00076299	chr6	-	5070	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	-20	0	0	multi-exon	FALSE	canonical	3	108	junction_2	97.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	NA	False	NA	-24	True	NA	NA	NA	30327150	30290797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30326353
WTC11_00076300	chr6	-	3572	5	NIC	ENSG00000231074.10	novel	7267	5	NA	NA	-71	-4	intron_retention	FALSE	canonical	3	24	junction_4	128.063460830949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTATCCAAAGTTTG	NA	False	NA	-28	True	NA	NA	NA	30326968	30290801	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326008
WTC11_00076301	chr6	-	2270	5	FSM	ENSG00000231074.10	ENST00000438412.6	2270	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	117.980930662544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATATCATTGCTTCCT	NA	False	NA	-101	True	NA	NA	NA	30326701	30290874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30291983_30294470_30294965_30296131_30296238_30314268_30314483_30326353
WTC11_00076302	chr6	-	4605	4	FSM	ENSG00000231074.10	ENST00000444126.5	4605	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	126.24579200908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	-30325902	False	NA	NA	False	NA	NA	NA	30326334	30291005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326008
WTC11_00076303	chr6	-	4433	3	FSM	ENSG00000231074.10	ENST00000454129.5	4433	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	-30325944	True	NA	NA	False	NA	NA	NA	30326376	30291005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30326008
WTC11_00076308	chr6	-	2890	1	FSM	ENSG00000231074.10	ENST00000602516.1	2890	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTAAGTCTGAATTATTA	NA	False	NA	5	True	AATAAA	-22	NA	30306960	30304070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30304100_30307000
WTC11_00076309	chr6	-	6802	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	-1	0	1	multi-exon	FALSE	canonical	3	420	junction_7	35.2042446726983	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGGATATGTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	30556489	30541379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
WTC11_00076311	chr6	-	545	2	FSM	ENSG00000204590.13	ENST00000464231.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCCTGCTCCACCTG	-30542691	False	NA	NA	False	NA	NA	NA	30547817	30547195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30547275_30547351
WTC11_00076318	chr6	-	3410	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	-4	0	4	multi-exon	FALSE	canonical	3	198	junction_19	28.1977583046455	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTGAAATTCTATC	-30672877	True	NA	-17	True	AATAAA	-31	NA	30673006	30653122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
WTC11_00076319	chr6	-	797	3	FSM	ENSG00000204560.10	ENST00000480966.1	797	3	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGTTGGAGAAACCCAC	NA	False	NA	NA	False	NA	NA	NA	30660577	30659472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30659625_30659735_30659835_30660031
WTC11_00076321	chr6	-	3903	3	FSM	ENSG00000146112.12	ENST00000274853.8	3349	3	-554	0	-6	0	multi-exon	FALSE	canonical	3	44	junction_2	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686512	False	687	-5	True	AATAAA	-17	NA	30687199	30676388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30677289_30679178_30679390_30684407
WTC11_00076322	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690287	True	NA	-8	True	AATAAA	-21	NA	30690974	30688046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30690841
WTC11_00076323	chr6	-	1692	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	-279	-2	157	0	multi-exon	FALSE	canonical	3	63	junction_2	7.40870359029762	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	NA	False	NA	-8	True	AATAAA	-21	NA	30691263	30688046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
WTC11_00076324	chr6	-	6968	15	FSM	ENSG00000137337.16	ENST00000376406.8	6968	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	74.55983078942	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30713419	True	NA	-1	True	AATAAA	-19	NA	30717281	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
WTC11_00076327	chr6	-	916	5	FSM	ENSG00000137337.16	ENST00000417033.1	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	24.6728595829507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCCTGAGCTCCAGCC	-30711882	False	3862	NA	False	AATAGA	-34	NA	30711914	30705447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30706099_30707383_30707455_30711411_30711505_30711666_30711727_30711873
WTC11_00076333	chr6	-	1583	7	FSM	ENSG00000137312.15	ENST00000487376.5	1583	7	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_5	54.3581231791124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-30740828	False	NA	-13	True	AATAAA	-22	NA	30740853	30727708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30731101_30740157_30740311_30740495_30740592_30740678
WTC11_00076334	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_9	87.1066954308846	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-30742662	False	NA	-13	True	AATAAA	-22	NA	30742687	30727708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
WTC11_00076336	chr6	-	1570	11	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	0	-119	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	218.580511482611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTCTAGAATATTTTC	-30742652	False	NA	-13	True	ATTAAA	-16	NA	30742677	30727827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146_30742204_30742526
WTC11_00076337	chr6	-	856	6	FSM	ENSG00000137312.15	ENST00000413165.5	856	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	276.022462854022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCCCCTCCCTGAC	-30742282	False	NA	NA	False	NA	NA	NA	30742307	30730918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146
WTC11_00076343	chr6	-	629	7	FSM	ENSG00000137312.15	ENST00000454845.1	629	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	238.247070636066	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGATCCGGGTGAGAG	-30740327	True	NA	NA	False	AAAAAG	-35	NA	30742524	30740508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
WTC11_00076345	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744547	30743198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30744197_30744308
WTC11_00076346	chr6	-	2791	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	-1992	0	1992	multi-exon	FALSE	canonical	3	68	junction_1	41.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTGTGTAATAAAAGA	NA	False	NA	NA	False	TTTAAA	-29	NA	30848159	30837533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30840020_30847036_30847150_30847967
WTC11_00076347	chr6	-	2548	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-116	1992	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	49.8285950924656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTGTGTAATAAAAGA	NA	False	NA	NA	False	TTTAAA	-29	NA	30848275	30837533	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
WTC11_00076348	chr6	-	1330	3	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-105	430	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	74	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTACCTTGTTTAAGCC	NA	False	NA	-30	True	GATAAA	-13	NA	30848264	30839095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30840016_30847036_30847150_30847967
WTC11_00076349	chr6	-	2803	8	ISM	ENSG00000204536.15	ENST00000451521.6	2587	18	10185	-81	-1963	0	3prime_fragment	FALSE	canonical	3	131	junction_3	22.119342352847	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31147381	False	NA	-3	True	AATAAA	-17	NA	31147422	31142438	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695
WTC11_00076350	chr6	-	2960	18	FSM	ENSG00000204536.15	ENST00000396268.8	2971	18	13	-2	-1	2	multi-exon	TRUE	canonical	3	49	junction_17	35.2165814987308	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTTGGAAATGTTATT	-31156833	False	NA	-1	True	AATAAA	-19	NA	31157789	31142436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384
WTC11_00076351	chr6	-	2900	19	NIC	ENSG00000204536.15	novel	2681	19	NA	NA	-157	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_18	40.9664496875187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTTGGAAATGTTATT	-31157439	False	NA	-1	True	AATAAA	-19	NA	31158395	31142436	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
WTC11_00076356	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2698.14680614306	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	NA	False	NA	-2	True	AATAAA	-33	NA	31170682	31164336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
WTC11_00076357	chr6	-	1555	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	-1	0	1	multi-exon	FALSE	canonical	2	6	junction_4	224.569247535756	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTCGCTGTGCTGA	-31272029	True	NA	-4	True	AATAAA	-22	NA	31272086	31268747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
WTC11_00076358	chr6	-	1171	6	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1554	8	NA	NA	489	1	multi-exon	FALSE	canonical	3	74	junction_3	241.951565401012	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTCGCTGTGCTGA	-31356331	False	NA	-4	True	AATAAA	-22	NA	31356416	31268747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31355316_31355593_31356166
WTC11_00076359	chr6	-	1561	8	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1554	8	NA	NA	0	1	intron_retention	TRUE	canonical	2	6	junction_4	221.819654637892	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTCGCTGTGCTGA	-31357094	True	NA	-4	True	AATAAA	-22	NA	31357179	31268747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31356687_31356958_31357085
WTC11_00076360	chr6	-	1548	8	NNC	ENSG00000204525.18	novel	1554	8	NA	NA	2	0	intron_retention	TRUE	canonical	2	6	junction_4	225.86324198867	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272027	True	NA	-5	True	AATAAA	-21	NA	31272084	31268748	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31269174_31269337_31269382_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
WTC11_00076365	chr6	-	1545	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	-9	0	6	multi-exon	FALSE	canonical	3	45	junction_6	108.88975889328	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCTGTGCTGAGTCTG	-31357094	True	NA	0	True	AATAAA	-27	NA	31357179	31353865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
WTC11_00076368	chr6	-	857	6	FSM	ENSG00000198563.14	ENST00000484566.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	716.839340438288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31498672	False	161	-2	True	ACTAAA	-32	NA	31535475	31530218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531179_31531295_31531406_31532779_31532912_31535366
WTC11_00076370	chr6	-	4028	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	-1	0	1	multi-exon	FALSE	canonical	3	614	junction_9	409.06590371265	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCGTCCCTTTATTGTA	-31505214	True	NA	-1	True	ACTAAA	-33	NA	31542017	31530217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
WTC11_00076371	chr6	-	2004	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	-1	0	1	multi-exon	FALSE	canonical	3	614	junction_10	389.023713930141	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCGTCCCTTTATTGTA	-31542370	False	NA	-1	True	ACTAAA	-33	NA	31542448	31530217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
WTC11_00076373	chr6	-	5158	5	FSM	ENSG00000198563.14	ENST00000481456.1	5158	5	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_3	113.910052234208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCCAGGTGTG	-31505198	True	NA	NA	False	NA	NA	NA	31542001	31532412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321
WTC11_00076379	chr6	-	1373	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	-3	0	3	multi-exon	FALSE	canonical	3	21	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCCTCATCATTTCTC	-31546530	True	NA	3	True	AATAAA	-41	NA	31546608	31544440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31545582_31546108_31546210_31546477
WTC11_00076381	chr6	-	3539	26	NNC	ENSG00000204463.14	novel	3843	26	NA	NA	-21	19659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.905972936602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGATGGGCGCGGTGGCT	-31651472	False	NA	NA	False	NA	NA	NA	31652466	31619368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31619395_31639039_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
WTC11_00076384	chr6	-	3638	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	-12	0	11	multi-exon	FALSE	canonical	3	120	junction_23	83.8609660432605	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	NA	False	NA	-2	True	AATAAA	-42	NA	31652700	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00076385	chr6	-	3898	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	-11	0	11	multi-exon	FALSE	canonical	3	101	junction_14	94.3170313358091	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	NA	False	NA	-2	True	AATAAA	-42	NA	31652705	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00076386	chr6	-	3790	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	-11	0	11	multi-exon	FALSE	canonical	3	120	junction_24	77.9641566504905	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	NA	False	NA	-2	True	AATAAA	-42	NA	31652705	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00076387	chr6	-	3931	26	FSM	ENSG00000204463.14	ENST00000676571.1	3920	26	0	-11	0	11	multi-exon	FALSE	canonical	3	6	junction_14	104.207669583385	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	NA	False	NA	-2	True	AATAAA	-42	NA	31652705	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00076388	chr6	-	3712	24	FSM	ENSG00000204463.14	ENST00000375964.11	3701	24	0	-11	0	11	multi-exon	FALSE	canonical	2	11	junction_14	98.9149259257089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	NA	False	NA	-2	True	AATAAA	-42	NA	31652705	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00076398	chr6	-	1067	7	FSM	ENSG00000204463.14	ENST00000424480.5	1056	7	0	-11	0	0	multi-exon	FALSE	canonical	3	40	junction_6	101.210589037577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAGAGATGGAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	31652667	31647592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
WTC11_00076402	chr6	-	2895	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	-449	35	-449	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGCCACTCTGTTCTT	-31661015	False	NA	-4	True	AATATA	-17	NA	31661227	31658332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31658300_31661200
WTC11_00076404	chr6	-	1708	3	ISM	ENSG00000204438.11	ENST00000375893.6	1598	4	440	5	0	-5	3prime_fragment	FALSE	canonical	3	105	junction_2	54	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGAAGCTATTTTG	-31664978	False	NA	-9	True	AATAAA	-23	NA	31665190	31662080	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_31662711_31663852_31664581_31664840
WTC11_00076406	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	72.9566081082904	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
WTC11_00076407	chr6	-	1707	4	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.9597608092387	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31662711_31663852_31664581_31664840_31664907_31665572
WTC11_00076408	chr6	-	1694	3	FSM	ENSG00000204438.11	ENST00000375896.9	2365	3	-181	852	7	-4	multi-exon	FALSE	canonical	3	85	junction_2	64	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGAAGCTATTTTGA	-31664966	False	NA	-8	True	AATAAA	-24	NA	31665178	31662079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31662711_31663852_31664578_31664840
WTC11_00076411	chr6	-	851	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	-15	0	-1	multi-exon	FALSE	canonical	3	9	junction_2	3.5	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATGTCTCTTTCTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	31681476	31676684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31677121_31679100_31679269_31681229
WTC11_00076412	chr6	-	899	5	FSM	ENSG00000204427.12	ENST00000468205.5	913	5	14	0	14	0	multi-exon	FALSE	canonical	3	225	junction_3	17.5695048308141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	NA	False	NA	1	True	AATAAA	-22	NA	31688375	31686954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040
WTC11_00076413	chr6	-	1979	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	-2	0	2	multi-exon	TRUE	canonical	3	202	junction_17	19.2136262819658	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTGTATAACTTCTCAA	NA	False	NA	3	True	AATAAA	-24	NA	31703324	31686952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
WTC11_00076414	chr6	-	1823	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	51.1398787369684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGGCTAATTGTATAA	NA	False	NA	-5	True	AATAAA	-16	NA	31703300	31686960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
WTC11_00076415	chr6	-	1856	18	FSM	ENSG00000204427.12	ENST00000440843.2	1906	18	50	0	-36	0	multi-exon	FALSE	canonical	1	3	junction_17	57.5525034854214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGTGAGAGGAGACAT	-31702884	False	NA	NA	False	NA	NA	NA	31703020	31687185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702611
WTC11_00076416	chr6	-	506	3	FSM	ENSG00000204427.12	ENST00000474007.5	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTATTTTGAGCGCCTC	NA	False	NA	NA	False	NA	NA	NA	31688303	31687574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687741_31687823_31687901_31688040
WTC11_00076419	chr6	-	1137	11	FSM	ENSG00000204427.12	ENST00000498420.5	1137	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	59.2537762509699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCAGCTCCCAGGCC	NA	False	NA	NA	False	NA	NA	NA	31703356	31689014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
WTC11_00076421	chr6	-	1339	7	NNC	ENSG00000213719.8	novel	1127	7	NA	NA	-68	21520	intron_retention	FALSE	non_canonical	0	0	junction_1	1069.40316947767	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTGGTGGCTCACACCT	-31735698	True	NA	NA	False	AAAAAG	-4	NA	31736640	31709060	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31709091_31730598_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
WTC11_00076422	chr6	-	1275	7	NNC	ENSG00000213719.8	novel	1254	6	NA	NA	0	21527	intron_retention	FALSE	non_canonical	0	0	junction_1	1069.40316947767	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTCACACCTATAATCC	-31735625	True	NA	NA	False	AAAAAG	-11	NA	31736567	31709053	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31709093_31730598_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
WTC11_00076425	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	196.199286441108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729285	False	NA	-6	True	AATAAA	-20	NA	31730227	31727037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
WTC11_00076427	chr6	-	1688	7	FSM	ENSG00000213722.10	ENST00000375792.7	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_6	70.2790074552059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729675	False	NA	-6	True	AATAAA	-20	NA	31730617	31727037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31730050
WTC11_00076428	chr6	-	1703	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	-510	0	-13	0	multi-exon	FALSE	canonical	3	449	junction_4	37.5691362690174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-31728867	False	126	-8	True	AATAAA	-18	NA	31729809	31727039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
WTC11_00076430	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2642	junction_5	198.062010491664	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735625	True	NA	-5	True	AATAAA	-33	NA	31736567	31730580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
WTC11_00076431	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	1062.05765955631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735630	True	NA	-5	True	AATAAA	-33	NA	31736572	31730580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
WTC11_00076432	chr6	-	1122	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	-22	-2	0	0	multi-exon	FALSE	canonical	3	97	junction_6	1033.79188750283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735625	True	NA	-5	True	AATAAA	-33	NA	31736567	31730580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
WTC11_00076433	chr6	-	4148	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	0	4942	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	211.366140986572	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	-31795731	False	NA	NA	False	AAAAAG	-9	NA	31795752	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772613_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00076434	chr6	-	4359	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-213	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.366140986572	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	-31795944	False	NA	NA	False	AAAAAG	-9	NA	31795965	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772611_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00076435	chr6	-	4362	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-213	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.874494962123	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	-31795944	False	NA	NA	False	AAAAAG	-9	NA	31795965	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772611_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792305_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00076436	chr6	-	893	6	NNC	ENSG00000204392.11	novel	858	5	NA	NA	0	24820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.826477748658	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	NA	False	NA	NA	False	AAAAAG	-9	NA	31806966	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772611_31797395_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
WTC11_00076437	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	168.215456936744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-31795731	False	NA	-1	True	AATAAA	-17	NA	31795752	31777517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00076445	chr6	-	662	4	FSM	ENSG00000204394.13	ENST00000461328.1	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_2	48.6506823065092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCAGTGGTACGTTCGC	-31784357	False	NA	NA	False	NA	NA	NA	31784435	31782411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31782846_31783095_31783187_31784213_31784309_31784393
WTC11_00076448	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	394.13853846078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805741	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
WTC11_00076450	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_4	17.1810215063017	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
WTC11_00076451	chr6	-	2096	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	1257	0	136	multi-exon	FALSE	canonical	3	291	junction_1	15.7936696179197	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTAGTTGGGACTACAGG	-31862793	False	NA	NA	False	NA	NA	NA	31862821	31858915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
WTC11_00076453	chr6	-	3040	10	FSM	ENSG00000204371.11	ENST00000494816.5	3036	10	0	-4	0	4	multi-exon	TRUE	canonical	3	704	junction_9	134.531285085168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	-31886399	False	NA	NA	False	AATAAA	-24	NA	31886437	31879754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911
WTC11_00076454	chr6	-	3942	26	FSM	ENSG00000204371.11	ENST00000480912.5	3940	26	0	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_25	303.626549563769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATTTTTGTGTTGGGGTG	-31896460	False	NA	NA	False	AATAAA	-22	NA	31896504	31879756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31893361_31893663_31896262
WTC11_00076455	chr6	-	4133	27	FSM	ENSG00000204371.11	ENST00000395728.7	4129	27	0	-4	0	4	multi-exon	FALSE	canonical	3	602	junction_19	137.774642336701	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	-31897158	False	NA	NA	False	AATAAA	-24	NA	31897202	31879754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
WTC11_00076456	chr6	-	4051	26	FSM	ENSG00000204371.11	ENST00000375528.8	4047	26	0	-4	0	4	multi-exon	FALSE	canonical	3	302	junction_18	167.655236721076	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	-31897178	False	NA	NA	False	AATAAA	-24	NA	31897222	31879754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
WTC11_00076458	chr6	-	4002	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	-35	-2	-32	2	multi-exon	FALSE	canonical	3	602	junction_19	138.760009340025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATTTTTGTGTTGGGGTG	-31892712	True	NA	NA	False	AATAAA	-22	NA	31897719	31879756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
WTC11_00076462	chr6	-	2647	2	FSM	ENSG00000204366.4	ENST00000375527.3	1963	2	26	-710	26	710	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACTCCCCCAAGTCCCC	NA	False	NA	NA	False	NA	NA	NA	31902060	31898902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31901326_31901836
WTC11_00076463	chr6	-	1447	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	-2	0	2	multi-exon	TRUE	canonical	3	566	junction_10	98.0909781784237	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCGCAGCTGTTTTAA	-31950520	True	NA	0	True	NA	NA	NA	31958971	31952084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
WTC11_00076472	chr6	-	2093	4	FSM	ENSG00000204348.10	ENST00000477826.5	2093	4	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_3	23.0120741254576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCTGTCTTCTTAGCTG	NA	False	NA	0	True	AATAAA	-21	NA	31972252	31969809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605
WTC11_00076473	chr6	-	1670	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	-3	0	0	multi-exon	TRUE	canonical	3	15	junction_6	39.4067112163511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCTGTCTTCTTAGCTG	NA	False	NA	0	True	AATAAA	-21	NA	31972290	31969809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
WTC11_00076475	chr6	-	1625	2	FSM	ENSG00000204348.10	ENST00000498357.1	1625	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAATAGTAATGCTTTA	-31971601	False	NA	-77	True	NA	NA	NA	31971683	31969886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31971148_31971319
WTC11_00076481	chr6	-	2625	18	FSM	ENSG00000213676.13	ENST00000375201.8	2624	18	0	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_17	15.1520551439897	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGCCTTCCTGGCTC	-32127990	False	NA	0	True	AATAAA	-25	NA	32128253	32115262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128125
WTC11_00076482	chr6	-	819	3	FSM	ENSG00000213676.13	ENST00000492342.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGCATCATGGTCTT	-32120157	False	NA	NA	False	NA	NA	NA	32120420	32118830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32118867_32118955_32119142_32119823
WTC11_00076483	chr6	-	394	2	FSM	ENSG00000213676.13	ENST00000475705.1	561	2	0	167	0	-113	multi-exon	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCTGGGAGACCAACAG	-32118696	False	NA	NA	False	NA	NA	NA	32120019	32118943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32119142_32119823
WTC11_00076484	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18754509363078	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	-32126899	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
WTC11_00076486	chr6	-	1348	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	-6	0	6	multi-exon	FALSE	canonical	3	48	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAATTGTGGTCTGTG	NA	False	NA	-6	True	ATTAAA	-26	NA	32130288	32128700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32129855_32130094
WTC11_00076487	chr6	-	1300	2	FSM	ENSG00000204314.12	ENST00000467780.5	1361	2	74	-13	74	13	multi-exon	FALSE	canonical	3	9	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACTGCGGCCCCGCAA	-32149763	False	NA	5	True	ATTAAA	-31	NA	32149783	32148345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32149399_32149536
WTC11_00076488	chr6	-	1455	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	1340	-13	-726	13	multi-exon	FALSE	canonical	3	9	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACTGCGGCCCCGCAA	-32150563	False	NA	5	True	ATTAAA	-31	NA	32150583	32148345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32149399_32149536_32149723_32150367
WTC11_00076489	chr6	-	543	2	FSM	ENSG00000284954.1	ENST00000497552.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32153888	False	NA	-4	True	AATAAA	-19	NA	32153908	32152801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32153173_32153736
WTC11_00076491	chr6	-	2203	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	-7	0	7	multi-exon	TRUE	canonical	3	237	junction_6	40.3680979652663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTTGCATTTGTTA	-32175948	False	NA	-23	True	AATAAA	-20	NA	32176084	32168204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
WTC11_00076492	chr6	-	2024	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	-7	0	7	multi-exon	FALSE	canonical	3	42	junction_6	111.952370824978	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTTGCATTTGTTA	-32177306	False	NA	-23	True	AATAAA	-20	NA	32177325	32168204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
WTC11_00076493	chr6	-	2741	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	-245	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	111.211010645929	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177306	False	NA	-30	True	AATAAA	-13	NA	32177325	32168211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
WTC11_00076495	chr6	-	2028	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	-7	0	7	multi-exon	FALSE	canonical	3	7	junction_6	124.93387139692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTTGCATTTGTTA	-32177960	True	NA	-23	True	AATAAA	-20	NA	32178096	32168204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
WTC11_00076500	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	3.39934634239519	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192619	False	NA	0	True	AATAAA	-18	NA	32192643	32190765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
WTC11_00076501	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	35.3647658929996	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192861	False	NA	0	True	AATAAA	-18	NA	32192885	32190765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
WTC11_00076503	chr6	-	5679	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	-31	-5	-31	5	multi-exon	TRUE	canonical	0	0	junction_4	0.88139633771206	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTCCATATTTCATT	-32838390	True	NA	1	True	ATTAAA	-30	NA	32838770	32825409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
WTC11_00076507	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	33.8502584923661	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	32844679	32840716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
WTC11_00076510	chr6	-	1098	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	-5	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.09815545882523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953097	32948612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
WTC11_00076511	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	26.0240273593462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
WTC11_00076512	chr6	-	2048	3	ISM	ENSG00000204257.15	ENST00000395305.7	777	4	1778	10	1178	-5	3prime_fragment	FALSE	canonical	3	70	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCAGTGTGGCTTC	-32951269	False	NA	-10	True	AATAAA	-9	NA	32951283	32948622	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_32948869_32949270_32949400_32949610
WTC11_00076516	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	22.6459600408735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200614	33193587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
WTC11_00076518	chr6	-	1330	3	FSM	ENSG00000204231.11	ENST00000481441.1	1330	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTCTCCTTCTCTTCC	-33198308	False	NA	NA	False	NA	NA	NA	33198635	33195784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33196607_33197761_33197942_33198307
WTC11_00076519	chr6	-	2976	22	NNC	ENSG00000223501.9	novel	2936	20	NA	NA	0	30679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.4648481788548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGCACGATGGCTCAT	-33271864	False	NA	NA	False	NA	NA	NA	33271876	33219592	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33219619_33244320_33244339_33250281_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
WTC11_00076521	chr6	-	2962	21	NNC	ENSG00000223501.9	novel	2936	20	NA	NA	0	5965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1955969124813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-33271864	False	NA	NA	False	NA	NA	NA	33271876	33244306	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33244337_33250281_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
WTC11_00076522	chr6	-	2816	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_19	56.5134749700069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACTTATCCCATTTCC	-33271853	False	NA	-10	True	AATAAA	-14	NA	33271865	33250281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271690
WTC11_00076524	chr6	-	3328	19	FSM	ENSG00000223501.9	ENST00000482399.5	3338	19	0	10	0	-4	multi-exon	FALSE	canonical	0	0	junction_18	80.1846056774885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACTTATCCCATTTCC	-33271864	False	NA	-10	True	AATAAA	-14	NA	33271876	33250281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33270198_33270284_33271136
WTC11_00076532	chr6	-	2139	14	NIC	ENSG00000227057.10	novel	2070	15	NA	NA	0	-16	intron_retention	FALSE	canonical	3	597	junction_12	53.7107087710299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGATTTTTTGGATAAT	-33280916	True	NA	-22	True	ATTAAA	-5	NA	33289202	33279123	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
WTC11_00076536	chr6	-	941	7	FSM	ENSG00000227057.10	ENST00000477718.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_5	63.7532134266362	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACTGCTTGCTGTTGCT	-33280961	True	NA	NA	False	NA	NA	NA	33289247	33287491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33287506_33287613_33287719_33287964_33288027_33288147_33288471_33288613_33288695_33288803_33289014_33289101
WTC11_00076538	chr6	-	2316	15	FSM	ENSG00000237441.10	ENST00000491168.5	2316	15	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_12	76.9843941248842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33296393	False	NA	-1	True	AATAAA	-23	NA	33297103	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296413_33296465_33296597_33296777_33297031
WTC11_00076540	chr6	-	2772	16	FSM	ENSG00000237441.10	ENST00000483151.5	2772	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_15	49.8272571546494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33297811	False	NA	-1	True	AATAAA	-23	NA	33298521	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454
WTC11_00076542	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_17	60.3913419858444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298232	True	NA	-1	True	AATAAA	-23	NA	33298942	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
WTC11_00076543	chr6	-	7231	25	Fusion	ENSG00000231925.13_ENSG00000237441.10	novel	2896	18	NA	NA	0	0	multi-exon	FALSE	canonical	3	106	junction_17	60.6268040968679	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33308462	False	NA	-1	True	AATAAA	-23	NA	33314212	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
WTC11_00076545	chr6	-	1141	9	FSM	ENSG00000237441.10	ENST00000476616.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	28.5326019668729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGGCCTCTGATTGCC	-33294913	False	NA	NA	False	NA	NA	NA	33295623	33293094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33293307_33293412_33293525_33293603_33293700_33293794_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507
WTC11_00076551	chr6	-	1888	7	FSM	ENSG00000231925.13	ENST00000426633.6	1888	7	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_5	21.320959953373	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTTTTTGGATGTTG	-33308462	False	NA	NA	False	NA	NA	NA	33314212	33303572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
WTC11_00076556	chr6	-	2672	2	FSM	ENSG00000236104.3	ENST00000431845.3	2660	2	0	-12	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCCGTGTGTTTGCTGG	-33311994	False	5750	-2	True	ATTAAA	-31	NA	33317744	33314405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33316986_33317652
WTC11_00076558	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_7	141.208775815623	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317209	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
WTC11_00076559	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_7	230.127560013031	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	NA	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
WTC11_00076560	chr6	-	2461	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	2	-1	2	0	multi-exon	FALSE	canonical	1	3	junction_2	340.733033326679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	NA	False	NA	0	True	AATAAA	-25	NA	33323014	33318557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
WTC11_00076561	chr6	-	817	4	FSM	ENSG00000204209.13	ENST00000468536.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	434.635735095749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACCACTGTCTTAGAGA	-33317180	True	NA	NA	False	NA	NA	NA	33322930	33319532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33319855_33320010_33320225_33320379_33320592_33322861
WTC11_00076565	chr6	-	757	1	FSM	ENSG00000228285.2	ENST00000447689.1	696	1	-19	-42	-19	42	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAAGTAAGCATGGCAC	NA	False	NA	NA	False	NA	NA	NA	33366262	33365505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33365500_33366300
WTC11_00076566	chr6	-	1047	5	FSM	ENSG00000112514.18	ENST00000462802.5	1054	5	0	7	0	-7	multi-exon	TRUE	canonical	3	1796	junction_3	71.550681338475	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGATTTGTTTATTT	-33418001	False	NA	-6	True	NA	NA	NA	33418043	33416448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
WTC11_00076567	chr6	-	848	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	7	0	-7	multi-exon	FALSE	canonical	3	550	junction_5	546.559639929624	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGATTTGTTTATTT	-33411845	True	NA	-6	True	NA	NA	NA	33418107	33416448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
WTC11_00076568	chr6	-	930	6	FSM	ENSG00000112514.18	ENST00000374500.10	937	6	0	7	0	-7	multi-exon	FALSE	canonical	3	768	junction_5	460.072776851663	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGATTTGTTTATTT	NA	False	NA	-6	True	NA	NA	NA	33418317	33416448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33418086
WTC11_00076569	chr6	-	845	6	FSM	ENSG00000112514.18	ENST00000482684.5	837	6	0	-8	0	0	multi-exon	FALSE	canonical	3	345	junction_5	628.06897710363	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	-33411845	True	NA	-10	True	AATAAA	-24	NA	33418107	33416541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417868
WTC11_00076570	chr6	-	1056	2	FSM	ENSG00000112514.18	ENST00000487637.1	1378	2	0	322	0	-264	multi-exon	FALSE	canonical	3	1899	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTGTGACTTGCTG	-33411846	True	NA	NA	False	NA	NA	NA	33418108	33416882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33417311_33417480
WTC11_00076571	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	NA	False	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33454000_33454400
WTC11_00076573	chr6	-	2198	7	NNC	ENSG00000030110.14	novel	2170	6	NA	NA	0	10370	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	181.93443568739	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACCGTCTGAAAAAAAAC	-33573201	True	NA	NA	False	NA	NA	NA	33580276	33562176	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33562205_33572551_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
WTC11_00076576	chr6	-	480	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	804	0	0	multi-exon	FALSE	canonical	3	1651	junction_3	89.8047264284508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-33699973	True	NA	-10	True	AATAAA	-22	NA	33711700	33697567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
WTC11_00076578	chr6	-	4571	8	FSM	ENSG00000161904.12	ENST00000508327.5	1306	8	-2153	-1112	-24	0	multi-exon	FALSE	canonical	3	386	junction_6	50.3133041195723	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGCCCATGGTTCT	-33785315	True	NA	NA	False	AATAAA	-19	NA	33789154	33771212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733
WTC11_00076580	chr6	-	534	5	FSM	ENSG00000161904.12	ENST00000510598.5	563	5	29	0	29	0	multi-exon	FALSE	canonical	3	459	junction_3	29.9874973947477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTCTGGGACCGAGCTG	-33776431	False	NA	NA	False	NA	NA	NA	33780270	33772766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099
WTC11_00076587	chr6	-	3323	10	FSM	ENSG00000124493.14	ENST00000545715.5	3471	10	148	0	148	0	multi-exon	FALSE	canonical	2	4	junction_9	70.1265170606792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATCTCGAGTGTGT	NA	False	NA	NA	False	AAAAAG	-34	NA	34063487	34022137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34022871_34024218_34024714_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34063345
WTC11_00076592	chr6	-	807	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	-15	0	1	multi-exon	FALSE	canonical	3	23	junction_3	53.6300988251933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGGCTTAAAATGACC	-34247824	True	NA	-11	True	AATAAA	-30	NA	34249040	34246379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
WTC11_00076593	chr6	-	1170	5	FSM	ENSG00000186577.14	ENST00000636500.1	1186	5	16	0	16	0	multi-exon	FALSE	canonical	3	32	junction_4	49.3203811826308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGAGGCTTAAAATGAC	-34247876	True	NA	-12	True	AATAAA	-29	NA	34249092	34246380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
WTC11_00076596	chr6	-	9929	6	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	0	6784	intron_retention	FALSE	non_canonical	0	0	junction_1	199.076266792403	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTCCCATCACTTCAG	-34392653	False	NA	NA	False	NA	NA	NA	34392669	34272894	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34272925_34279679_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
WTC11_00076597	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	22.0156194552867	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-34392653	False	NA	-3	True	AATAAA	-20	NA	34392669	34279678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
WTC11_00076598	chr6	-	805	7	NNC	ENSG00000124614.16	novel	781	6	NA	NA	0	1616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4355.89131394355	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATGCATGGTGGTGCT	-34211666	True	NA	NA	False	NA	NA	NA	34426026	34415837	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34415865_34417456_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
WTC11_00076600	chr6	-	612	6	FSM	ENSG00000124614.16	ENST00000464218.5	615	6	0	3	0	-3	multi-exon	FALSE	canonical	1	72	junction_5	4040.21352901056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTTTGTCCATTTTGT	-34425559	False	NA	-8	True	AATAAA	-19	NA	34425580	34417456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425515
WTC11_00076601	chr6	-	780	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	1	0	-1	multi-exon	FALSE	canonical	3	1712	junction_5	3414.76332415586	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCCATTTTGTTT	-34211666	True	NA	-6	True	AATAAA	-21	NA	34426026	34417454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
WTC11_00076602	chr6	-	670	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	1	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	4681.31711344859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCCATTTTGTTT	-34211692	True	NA	-6	True	AATAAA	-21	NA	34426052	34417454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
WTC11_00076603	chr6	-	1406	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	1	0	-1	multi-exon	FALSE	canonical	3	7167	junction_4	1578.5908866771	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCCATTTTGTTT	-34211707	True	NA	-6	True	AATAAA	-21	NA	34426067	34417454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
WTC11_00076604	chr6	-	587	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	1	0	-1	multi-exon	FALSE	canonical	3	7167	junction_5	1530.98169812705	3610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCCATTTTGTTT	-34211709	True	NA	-6	True	AATAAA	-21	NA	34426069	34417454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
WTC11_00076607	chr6	-	4344	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	-6	0	6	multi-exon	FALSE	canonical	3	31	junction_4	12.747548783982	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGTGTTGGTGAGTT	-34695673	True	NA	-9	True	ATTAAA	-28	NA	34696767	34587281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
WTC11_00076608	chr6	-	1561	6	NNC	ENSG00000064995.19	novel	1849	5	NA	NA	0	7822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.642241165306	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTATGTATACAATAAC	-34879584	True	NA	NA	False	AAAAAG	-1	NA	34888042	34869639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34869669_34877778_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
WTC11_00076609	chr6	-	1559	6	NNC	ENSG00000064995.19	novel	1849	5	NA	NA	0	7822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.642241165306	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTATGTATACAATAAC	-34879584	True	NA	NA	False	AAAAAG	-1	NA	34888042	34869639	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34869667_34877778_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
WTC11_00076610	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	17.1828402774396	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-34879584	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
WTC11_00076611	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	151.085700477871	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	-34879613	True	NA	-3	True	ATTAAA	-17	NA	34888071	34877777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
WTC11_00076612	chr6	-	4266	1	FSM	ENSG00000272374.1	ENST00000605896.1	4261	1	14	-19	14	19	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTCATGCAGGTTGGT	NA	False	NA	12	True	AATAAA	-37	NA	35224616	35220350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35220400_35224600
WTC11_00076617	chr6	-	515	4	FSM	ENSG00000112041.13	ENST00000496434.5	513	4	0	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTTTTGGTTGTTTT	-35505856	False	NA	-15	True	NA	NA	NA	35506018	35503383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35503658_35503736_35503849_35505740_35505854_35506002
WTC11_00076619	chr6	-	400	3	FSM	ENSG00000112041.13	ENST00000448446.2	559	3	4	155	4	-155	multi-exon	FALSE	canonical	3	7	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGCTGAGGGTGCTGA	-35512108	False	162	NA	False	NA	NA	NA	35512270	35510860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35511011_35511647_35511807_35512179
WTC11_00076621	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	2	230	junction_7	44.3594409342589	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	-35683637	True	NA	-10	True	AATAAA	-17	NA	35688915	35573589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
WTC11_00076622	chr6	-	4314	17	NNC	ENSG00000096063.16	novel	4348	16	NA	NA	0	11109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.872283005169	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTACACCAGTGCTGTG	-35908012	True	NA	NA	False	NA	NA	NA	35921098	35821856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35821891_35833033_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
WTC11_00076624	chr6	-	4342	17	NNC	ENSG00000096063.16	novel	4357	16	NA	NA	0	11109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.872283005169	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTACACCAGTGCTGTG	-35908042	True	NA	NA	False	NA	NA	NA	35921128	35821856	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35821889_35833033_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
WTC11_00076625	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	65.2368675588343	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-35908012	True	NA	-2	True	AGTAAA	-13	NA	35921098	35832965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
WTC11_00076626	chr6	-	4762	15	FSM	ENSG00000096063.16	ENST00000346162.10	4762	15	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	67.5210095799365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35907979	True	NA	-9	True	AATAAA	-20	NA	35921065	35833033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467
WTC11_00076632	chr6	-	556	1	FSM	ENSG00000237719.1	ENST00000453556.1	656	1	-31	131	-31	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGCTGCAGGGACTCG	NA	False	NA	NA	False	NA	NA	NA	36092677	36092121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36092100_36092700
WTC11_00076636	chr6	-	933	8	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	128	-21207	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.7145139200019	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGAGGGCAATTTT	-36545126	True	NA	NA	False	AATAAA	-25	NA	36547351	36515098	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36515199_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540205_36547189
WTC11_00076638	chr6	-	1543	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	-27	0	25	multi-exon	FALSE	canonical	3	372	junction_1	13.4742552876052	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGGTTCCAATGGTC	-36874784	False	NA	6	True	NA	NA	NA	36874803	36854801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
WTC11_00076639	chr6	-	1983	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	36484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	939.23522376216	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAACATACTCTTACCAT	-36966301	True	NA	NA	False	NA	NA	NA	36986196	36931656	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36931687_36968142_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076640	chr6	-	1982	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	36484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	939.23522376216	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAACATACTCTTACCAT	-36966301	True	NA	NA	False	NA	NA	NA	36986196	36931656	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36931686_36968142_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076641	chr6	-	1985	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	36484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	939.23522376216	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAACATACTCTTACCAT	-36966301	True	NA	NA	False	NA	NA	NA	36986196	36931656	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36931688_36968141_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076642	chr6	-	1956	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	-1	0	1	multi-exon	FALSE	canonical	3	1197	junction_4	539.922568675629	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGGGGCGTCTCTT	-36966301	True	NA	-6	True	AATAAA	-19	NA	36986196	36968139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076643	chr6	-	2007	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	-1	0	1	multi-exon	FALSE	canonical	3	1723	junction_4	396.87837719003	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGGGGCGTCTCTT	NA	False	NA	-6	True	AATAAA	-19	NA	36986298	36968139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076645	chr6	-	1572	11	FSM	ENSG00000137409.20	ENST00000460219.2	1572	11	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_3	416.152568176624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCGAGGGCAGAACCT	-36966230	True	NA	NA	False	NA	NA	NA	36986125	36969465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00076647	chr6	-	592	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	-20	0	20	multi-exon	FALSE	canonical	3	361	junction_3	34.08160142299	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTCTGACTAGCGGAG	-37496410	True	NA	NA	False	AATAAA	-35	NA	37499893	37482917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
WTC11_00076651	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_3	106.558903898267	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-38661254	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
WTC11_00076652	chr6	-	2016	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	2	0	-1	multi-exon	FALSE	canonical	3	87	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTTTGTTGACTGATT	-39114253	True	NA	-3	True	ATTAAA	-26	NA	39115186	39104064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39105777_39114882
WTC11_00076654	chr6	-	3909	6	NNC	ENSG00000164626.9	novel	3783	5	NA	NA	-100	34105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.6628633890556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTAAAAATAGTAAGCAC	-39229550	False	NA	NA	False	AAAAAG	-3	NA	39229575	39154865	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_39154892_39188970_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
WTC11_00076655	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.9451873154003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225210	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
WTC11_00076658	chr6	-	4325	12	NNC	ENSG00000124615.20	novel	3358	11	NA	NA	0	370	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	37.410167884641	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACGCACATGCTGGGCT	-39931848	True	NA	NA	False	NA	NA	NA	39934424	39903794	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_39903973_39904142_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
WTC11_00076660	chr6	-	4148	11	FSM	ENSG00000124615.20	ENST00000340692.10	4143	11	0	-5	0	0	multi-exon	FALSE	canonical	3	15	junction_1	34.706771673551	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATAGTCCTTTTGTTTCC	-39931886	True	NA	-9	True	NA	NA	NA	39934462	39904164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39907118_39909054_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
WTC11_00076661	chr6	-	3298	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	60	0	6	0	multi-exon	FALSE	canonical	3	93	junction_1	13.9728307797669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	-39931915	True	NA	NA	False	ATTAAA	-16	NA	39934491	39905058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
WTC11_00076663	chr6	-	2594	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	47	-201	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	32.3457402694736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAGAATGAAGACACTG	-39931801	False	NA	NA	False	AATAAA	-22	NA	39934377	39905521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
WTC11_00076667	chr6	-	3336	6	FSM	ENSG00000124596.17	ENST00000479950.5	3330	6	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	115.291977171007	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-41072580	False	NA	-20	True	AATAAA	-26	NA	41072591	41064771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072318
WTC11_00076669	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.24407565583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-41071907	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
WTC11_00076672	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	90.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-41071908	True	NA	NA	False	NA	NA	NA	41072490	41070824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41071277_41071595_41071676_41072318
WTC11_00076673	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	97.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	-41072309	False	NA	-8	True	AATAAA	-21	NA	41072320	41071040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41071277_41071595_41071676_41072235
WTC11_00076676	chr6	-	2174	7	FSM	ENSG00000137218.10	ENST00000373018.7	2174	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	6.82316316348624	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGGATATCATCTTC	-41779599	True	NA	NA	False	AATATA	-18	NA	41779900	41770175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41771534_41771815_41771965_41772797_41772960_41775418_41775606_41776921_41777011_41778032_41778177_41779815
WTC11_00076677	chr6	-	465	4	FSM	ENSG00000164663.15	ENST00000423567.1	752	4	287	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_3	3.39934634239519	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCATCCTGAACCCTCA	-41893782	False	NA	NA	False	NA	NA	NA	41894168	41806938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41807012_41871563_41871638_41891793_41891876_41893932
WTC11_00076678	chr6	-	2495	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	-17	0	17	multi-exon	FALSE	canonical	3	338	junction_2	13.2748718344933	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATTTGCTCTCGTCCA	-41917437	True	NA	-3	True	AATAAA	-32	NA	41921139	41905336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
WTC11_00076680	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-41917437	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41907288_41909268_41909523_41921004
WTC11_00076682	chr6	-	2045	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	-19	0	1	multi-exon	FALSE	canonical	3	229	junction_2	10.779030568655	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGTGGGTAAGTCTA	-41939078	True	NA	1	True	AATAAA	-38	NA	41941808	41934932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
WTC11_00076683	chr6	-	1843	5	FSM	ENSG00000112576.13	ENST00000372988.8	2133	5	294	-4	2	0	multi-exon	FALSE	canonical	0	0	junction_4	104.156132800714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-42048645	True	NA	-18	True	AATAAA	-19	NA	42048674	41934951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_42048500
WTC11_00076684	chr6	-	1724	4	FSM	ENSG00000112576.13	ENST00000414200.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	108.10283170307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACTGTAATAAAGATGA	-41939025	True	NA	-51	True	NA	NA	NA	41941755	41934984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41941451
WTC11_00076685	chr6	-	1223	4	FSM	ENSG00000112576.13	ENST00000510503.5	1257	4	34	0	2	0	multi-exon	FALSE	canonical	0	0	junction_3	112.286340318946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGACAGCTGCTCCTAG	-42048645	True	NA	NA	False	NA	NA	NA	42048674	41935434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41937234_41937395_41940369_41940586_42048500
WTC11_00076686	chr6	-	876	3	FSM	ENSG00000112576.13	ENST00000512426.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	9.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTGGGAGCTGTCCT	-41937855	False	NA	NA	False	NA	NA	NA	41940585	41936195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936696_41937234_41937395_41940369
WTC11_00076691	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_5	35.8685873091701	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210826	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
WTC11_00076692	chr6	-	7803	17	ISM	ENSG00000124496.12	ENST00000372922.8	7286	18	531	-289	-253	-5	3prime_fragment	FALSE	canonical	3	29	junction_10	27.4180597417104	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCGTTTGGCTTAAATA	-42449849	True	NA	-15	True	AATAAA	-15	NA	42451514	42224935	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176
WTC11_00076694	chr6	-	4174	16	FSM	ENSG00000124496.12	ENST00000340840.6	4174	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	40.1727381303402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATAATTGGCACAA	-42451235	False	NA	-40	True	TTTAAA	-27	NA	42451261	42228148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42228670_42232680_42232929_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362946_42363080_42451176
WTC11_00076695	chr6	-	2208	2	ISM	ENSG00000112619.8	ENST00000230381.7	3001	3	18026	-91	18026	91	3prime_fragment	FALSE	canonical	3	16	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCTAAGGGAAGCATTG	-42704354	True	NA	89	True	AAAAAG	-10	NA	42704571	42696506	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_42698508_42704364
WTC11_00076696	chr6	-	1613	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGGTGTGTGTGTG	-42742684	True	NA	-32	True	AATAAA	-24	NA	42746103	42744490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42744500_42746100
WTC11_00076697	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	-42889992	True	NA	-1	True	AATAAA	-17	NA	42890821	42890264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42890300_42890800
WTC11_00076698	chr6	-	434	1	FSM	ENSG00000181524.6	ENST00000326586.6	421	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	913	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCAATGGCACGATCTC	-42956713	True	NA	NA	False	AAAAAG	-26	NA	42956765	42956331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42956300_42956800
WTC11_00076699	chr6	-	2152	3	FSM	ENSG00000124733.5	ENST00000642555.1	2152	3	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_2	32	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-43013674	False	NA	NA	False	NA	NA	NA	43013684	43011142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43012622_43012925_43013029_43013114
WTC11_00076701	chr6	-	973	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	31	0	-6	0	multi-exon	FALSE	canonical	3	998	junction_3	291.088760804444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	-42992624	True	NA	-2	True	AATAAA	-28	NA	43013952	43012081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
WTC11_00076703	chr6	-	3647	21	ISM	ENSG00000044090.13	ENST00000674112.2	5415	26	3873	-23	-1680	-1	3prime_fragment	FALSE	canonical	2	5	junction_2	27.0193911848509	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACGTGTGTGTTTGGCG	-43049941	False	NA	NA	False	AATAAA	-18	NA	43050023	43037618	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43038012_43038266_43038462_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962
WTC11_00076705	chr6	-	5449	26	FSM	ENSG00000044090.13	ENST00000674134.1	5427	26	1	-23	1	-1	multi-exon	FALSE	canonical	2	24	junction_25	25.9237034391308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACGTGTGTGTTTGGCG	-43053807	False	5527	NA	False	AATAAA	-18	NA	43053889	43037618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053710
WTC11_00076711	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	TRUE	canonical	1	34	junction_1	223.333472636772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	-43053867	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
WTC11_00076712	chr6	-	573	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	-3	0	0	multi-exon	FALSE	canonical	3	123	junction_1	259	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	-43053907	True	NA	NA	False	AATAAA	-23	NA	43059434	43054231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43054487_43058064_43058234_43059285
WTC11_00076716	chr6	-	836	4	FSM	ENSG00000112667.13	ENST00000509253.5	834	4	0	-2	0	0	multi-exon	FALSE	canonical	2	3	junction_3	518.33086816134	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-43218985	True	NA	-5	True	ATTAAA	-21	NA	43229453	43225628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229050
WTC11_00076717	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	18.4028983224563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-43219013	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
WTC11_00076718	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	1	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-43219010	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43226144_43226326_43226396_43229260
WTC11_00076720	chr6	-	993	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	-2	0	2	multi-exon	FALSE	canonical	3	117	junction_4	50.7004005136537	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAACTCTTCTTTGGGC	-43305341	True	NA	-12	True	AATAAA	-16	NA	43308826	43305469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
WTC11_00076721	chr6	-	1076	6	NIC	ENSG00000146215.14	novel	800	7	NA	NA	-24	2	intron_retention	FALSE	canonical	3	83	junction_3	67.3278545625806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAACTCTTCTTTGGGC	-43305365	True	NA	-12	True	AATAAA	-16	NA	43308850	43305469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
WTC11_00076723	chr6	-	642	3	FSM	ENSG00000146215.14	ENST00000477866.1	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	32.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTGGGATCTTGGGGGC	-43303158	False	NA	NA	False	NA	NA	NA	43306643	43305716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43305876_43306066_43306125_43306218
WTC11_00076725	chr6	-	771	2	FSM	ENSG00000146215.14	ENST00000487744.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAGGTGAGCAGGGCA	-43303644	False	NA	NA	False	NA	NA	NA	43307129	43306226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43306314_43306445
WTC11_00076726	chr6	-	773	3	FSM	ENSG00000146215.14	ENST00000485819.1	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	48	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTCATTCTTGGCAAA	-43305303	True	NA	NA	False	NA	NA	NA	43308788	43307502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43307744_43307838_43307897_43308314
WTC11_00076728	chr6	-	1579	3	ISM	ENSG00000171467.16	ENST00000361428.3	8210	10	127	20820	-42	-20820	5prime_fragment	FALSE	canonical	3	58	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGTTTTTTTACTTAA	-43369487	False	NA	NA	False	AATAAA	-19	NA	43369520	43356889	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43357766_43365291_43365441_43368966
WTC11_00076730	chr6	-	1651	9	FSM	ENSG00000137207.12	ENST00000372422.7	1507	9	0	-144	0	144	multi-exon	FALSE	canonical	3	450	junction_8	17.0655903794741	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGTGATTGAATATCAC	-43507040	True	NA	NA	False	GATAAA	-26	NA	43516926	43511687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
WTC11_00076731	chr6	-	1300	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	21	0	2	0	multi-exon	FALSE	canonical	2	4	junction_8	159.131971567627	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	-43507065	True	NA	-72	True	NA	NA	NA	43516951	43512158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
WTC11_00076732	chr6	-	931	8	FSM	ENSG00000137207.12	ENST00000503972.5	933	8	2	0	2	0	multi-exon	FALSE	canonical	3	11	junction_3	165.053609101864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTGGTAGAGGGTAAG	-43507065	True	NA	NA	False	NA	NA	NA	43516951	43512454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43512564_43512760_43512875_43513068_43513099_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
WTC11_00076734	chr6	-	545	1	FSM	ENSG00000271754.1	ENST00000607571.1	545	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTAAGTTTCATGAAA	NA	False	NA	-17	True	ATTAAA	-17	NA	43519724	43519179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43519200_43519700
WTC11_00076735	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_9	49.2948190821862	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-43565697	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
WTC11_00076742	chr6	-	3051	12	FSM	ENSG00000172432.19	ENST00000307126.10	3031	12	0	-20	0	8	multi-exon	FALSE	canonical	3	34	junction_7	13.3824851612437	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACAGGCTCAGCTTCCTT	-43626286	True	NA	NA	False	AATAAA	-35	NA	43629264	43620473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
WTC11_00076745	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_2	48.3793344311391	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	-43681136	True	NA	NA	False	AAGAAA	-15	NA	43687791	43671201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
WTC11_00076746	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	316.065954351303	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	-43681136	True	NA	-60	True	GGGGCT	-15	NA	43687791	43671509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
WTC11_00076747	chr6	-	1297	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	-17	-477	-17	-105	multi-exon	FALSE	canonical	3	681	junction_1	42.0773097999385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGCTGTGAGCTCCTTA	-43681153	True	NA	-5	True	NA	NA	NA	43687808	43671306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
WTC11_00076755	chr6	-	4801	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	2	-5	2	5	multi-exon	TRUE	canonical	3	69	junction_18	13.2526470209247	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCTGGCATCATTTT	-44310693	True	NA	-15	True	AGTAAA	-19	NA	44313345	44298725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
WTC11_00076756	chr6	-	4211	11	FSM	ENSG00000196284.17	ENST00000371459.6	4211	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	10.590561835899	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTACTTGTTTAGAAT	-45376245	True	NA	NA	False	AATAAA	-32	NA	45377934	44826725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
WTC11_00076759	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.84754619472471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-46169508	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
WTC11_00076763	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	11.1139849359726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	-46734997	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
WTC11_00076764	chr6	-	3610	6	FSM	ENSG00000146072.6	ENST00000296861.2	3595	6	0	-15	0	15	multi-exon	FALSE	canonical	3	292	junction_5	13.2060592153753	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTAATCGTTGAATTT	-47303147	True	NA	-3	True	AATAAA	-32	NA	47309905	47231516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_47232995_47234669_47234899_47253255_47253522_47283937_47284433_47285943_47286596_47309415
WTC11_00076765	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	-47477497	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_47477200_47477600
WTC11_00076766	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	28.2826753017147	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-49461029	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
WTC11_00076767	chr6	-	3750	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACAGCTCTTGACAGT	-49461039	True	NA	-15	True	AATAAA	-14	NA	49463263	49430365	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
WTC11_00076768	chr6	-	400	1	FSM	ENSG00000230204.1	ENST00000425761.1	545	1	288	-143	288	143	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAAATCTGGTACCCC	NA	False	NA	NA	False	AAAACA	-38	NA	50912968	50912568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_50912600_50913000
WTC11_00076770	chr6	-	2623	15	NNC	ENSG00000112118.20	novel	3095	16	NA	NA	-2222	47509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1128.33856774879	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCCAGAATGCATAGAA	-52247067	False	NA	NA	False	AAAAAG	-2	NA	52281674	52216504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216530_52264016_52264787_52266074_52266145_52266610_52266694_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52281540
WTC11_00076771	chr6	-	3094	18	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	47509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	677.177712258192	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCCAGAATGCATAGAA	-52250135	True	NA	NA	False	AAAAAG	-2	NA	52284742	52216504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216531_52264014_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
WTC11_00076772	chr6	-	3089	18	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	47509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	677.177712258192	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCCAGAATGCATAGAA	-52250135	True	NA	NA	False	AAAAAG	-2	NA	52284742	52216504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216531_52264019_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
WTC11_00076773	chr6	-	3091	18	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	47509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	677.177712258192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCCAGAATGCATAGAA	-52250135	True	NA	NA	False	AAAAAG	-2	NA	52284742	52216504	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216531_52264017_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
WTC11_00076774	chr6	-	3219	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	-11	0	11	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTTATACATA	NA	False	NA	1	True	AATAAA	-35	NA	52284881	52264002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
WTC11_00076775	chr6	-	3106	16	FSM	ENSG00000112118.20	ENST00000229854.12	3095	16	0	-11	0	11	multi-exon	FALSE	canonical	3	23	junction_15	714.629992840118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTTATACATA	NA	False	NA	1	True	AATAAA	-35	NA	52284881	52264002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
WTC11_00076779	chr6	-	1247	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	-7	0	2	multi-exon	FALSE	canonical	3	129	junction_6	17.410884207555	5847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTGTGAGAATTTTT	-52993369	True	NA	-1	True	AATAAA	-24	NA	52995284	52977945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
WTC11_00076780	chr6	-	1134	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	-7	0	2	multi-exon	FALSE	canonical	3	11	junction_3	60.8624679092131	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTGTGAGAATTTTT	-52993389	True	NA	-1	True	AATAAA	-24	NA	52995304	52977945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
WTC11_00076782	chr6	-	6208	14	FSM	ENSG00000112144.16	ENST00000676107.1	6146	14	-1	-61	-1	37	multi-exon	FALSE	canonical	3	34	junction_13	4.93628037142598	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTTAGTCCATTTGGAA	-53060245	True	NA	NA	False	NA	NA	NA	53061825	53001241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
WTC11_00076783	chr6	-	2867	7	FSM	ENSG00000012660.14	ENST00000542638.5	2875	7	0	8	0	-2	multi-exon	FALSE	canonical	2	7	junction_2	321.627329200876	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGCCTGCATTTTAC	NA	False	NA	-19	True	ATTAAA	-12	NA	53349179	53267405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53269271_53270592_53270728_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
WTC11_00076784	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	49.5889223969406	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-53333954	True	NA	-17	True	ATTAAA	-14	NA	53348950	53267403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
WTC11_00076785	chr6	-	592	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	-12	0	12	multi-exon	FALSE	canonical	3	43	junction_1	394.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTTATTGTTTGTGA	-53333930	True	NA	7	True	AATAAA	-44	NA	53348926	53294075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53294492_53295641_53295708_53348816
WTC11_00076787	chr6	-	3787	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	-2	0	2	multi-exon	TRUE	canonical	3	185	junction_14	16.9383194758709	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTGTGTGAGTTCC	-53543237	True	NA	-2	True	AATAAA	-30	NA	53545101	53497338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
WTC11_00076789	chr6	-	1800	15	FSM	ENSG00000001084.13	ENST00000513939.6	1800	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	55.7195968164501	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTCTACAGAAAGAAAAA	-53544631	False	NA	NA	False	AGTAAA	-35	NA	53544645	53498755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53520777_53520961_53522414_53522528_53544495
WTC11_00076792	chr6	-	2879	22	NNC	ENSG00000124749.17	novel	4094	29	NA	NA	2206	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_5	3.77484213002027	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	56164731	56056589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124291_56125564_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422
WTC11_00076796	chr6	-	9969	43	NIC	ENSG00000151914.22	novel	16742	84	NA	NA	-252	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_42	45.1059536220463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACCTGATTATTTAAAG	-56542443	False	NA	NA	False	AATAAA	-22	NA	56542456	56457989	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56468981_56469000_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56540279
WTC11_00076798	chr6	-	9883	42	NIC	ENSG00000151914.22	novel	16742	84	NA	NA	-252	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_41	41.3019092742286	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTACTCACATACTATA	-56542443	False	NA	NA	False	AATAAA	-21	NA	56542456	56458057	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56540279
WTC11_00076800	chr6	-	3784	4	FSM	ENSG00000151914.22	ENST00000466429.5	2016	4	-1520	-248	277	-2	multi-exon	FALSE	canonical	3	223	junction_1	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATACCTGATTATTTAAA	-56465822	False	NA	NA	False	AATAAA	-21	NA	56465836	56457990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564
WTC11_00076806	chr6	-	1372	3	FSM	ENSG00000151914.22	ENST00000520144.2	1706	3	281	53	281	-53	multi-exon	FALSE	canonical	3	20	junction_1	4.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGTTGTTAAGTTTG	-56560413	False	NA	NA	False	AAGAAA	-4	NA	56560423	56554798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56555841_56557318_56557519_56560293
WTC11_00076810	chr6	-	306	2	FSM	ENSG00000151914.22	ENST00000524302.1	577	2	-58	329	0	-329	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCGAGAGGGCAGTGCT	-56850787	True	NA	NA	False	AAGAAA	-26	NA	56851916	56851427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56851605_56851787
WTC11_00076811	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	14.9071198499986	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-57221502	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
WTC11_00076813	chr6	-	2627	2	FSM	ENSG00000215190.9	ENST00000422882.1	2622	2	0	-5	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	NA	False	NA	-5	True	AATAAA	-20	NA	57950399	57946077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57947178_57948872
WTC11_00076817	chr6	-	1359	1	FSM	ENSG00000233859.2	ENST00000433151.1	1110	1	3	-252	3	252	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATTTGTGTAGAAAT	NA	False	NA	NA	False	AATAAA	-7	NA	65838036	65836677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_65836700_65838000
WTC11_00076818	chr6	-	285	1	FSM	ENSG00000230910.5	ENST00000604392.1	2365	1	-91	2171	15	-2171	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGAAACTCACTGGGA	-68635099	False	NA	NA	False	GGGGCT	-15	NA	68635118	68634833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_68634800_68635100
WTC11_00076819	chr6	-	3867	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	21	12	21	-12	multi-exon	FALSE	canonical	3	206	junction_5	28.4498779532629	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAAGCCACTGAGTCT	-69794724	True	NA	NA	False	AATAAA	-7	NA	69796989	69674021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
WTC11_00076821	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	10.5700182667888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70282288	True	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
WTC11_00076822	chr6	-	3513	19	FSM	ENSG00000112280.18	ENST00000493682.7	3513	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	8.743251365736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGGTTTCTTAATC	NA	False	NA	-22	True	TTTAAA	-38	NA	70262099	70216143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656
WTC11_00076823	chr6	-	2861	32	FSM	ENSG00000112280.18	ENST00000684176.1	2849	32	0	-12	0	0	multi-exon	FALSE	canonical	3	3	junction_31	17.6078215521596	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGGTTTCTTAATC	-70282119	False	NA	-22	True	TTTAAA	-38	NA	70283040	70216143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282897
WTC11_00076824	chr6	-	1371	1	FSM	ENSG00000232389.1	ENST00000454078.1	1101	1	-32	-238	-32	238	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATCCCCCCATTAGA	NA	False	NA	NA	False	NA	NA	NA	70609366	70607995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70608000_70609400
WTC11_00076825	chr6	-	3950	1	FSM	ENSG00000279289.1	ENST00000624429.1	3978	1	10	18	10	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCCAAAAAAAAAAAAAACT	NA	False	NA	NA	False	AAAACA	-23	NA	71390819	71386869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_71386900_71390800
WTC11_00076826	chr6	-	548	3	FSM	ENSG00000256980.5	ENST00000370388.4	679	3	125	6	125	-6	multi-exon	FALSE	canonical	2	2	junction_2	0.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGCCTTCGATGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	73225371	73223549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73223840_73224165_73224349_73225296
WTC11_00076828	chr6	-	1625	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	-195	0	-45	0	multi-exon	FALSE	canonical	3	19	junction_3	9.75640815054393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73310395	False	NA	-3	True	AATAAA	-22	NA	73310410	73241313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
WTC11_00076829	chr6	-	2058	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	-5	0	5	multi-exon	FALSE	canonical	3	28	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTATTATTGTCATTTT	-73309216	True	NA	NA	False	AATAAA	-17	NA	73310143	73274133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73275557_73291997_73292041_73309551
WTC11_00076830	chr6	-	661	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	-2	0	2	multi-exon	FALSE	canonical	3	93	junction_1	2.5	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTGGTTGATGGAT	-73353355	True	NA	NA	False	AATAAA	-19	NA	73354276	73353060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73353379_73353852_73354033_73354113
WTC11_00076832	chr6	-	3201	5	FSM	ENSG00000164430.17	ENST00000370315.4	3201	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	1.92028643696715	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTTGCTTTATACA	-73451290	True	NA	-15	True	AATAAA	-17	NA	73452297	73423710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
WTC11_00076833	chr6	-	2236	6	FSM	ENSG00000164430.17	ENST00000680833.1	1595	6	-184	-457	-68	0	multi-exon	FALSE	canonical	2	5	junction_1	11.2320968656792	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTTGCTTTATACA	-73452354	False	NA	-15	True	AATAAA	-17	NA	73452365	73423710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73424431_73425463_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
WTC11_00076834	chr6	-	3709	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	-15	0	0	multi-exon	FALSE	canonical	3	309	junction_7	7701.15345190549	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGGCATTTCTTTT	-73520446	False	NA	-4	True	AATAAA	-18	NA	73520591	73515749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
WTC11_00076835	chr6	-	4441	7	FSM	ENSG00000156508.19	ENST00000316292.13	4441	7	0	0	0	0	multi-exon	FALSE	canonical	3	17585	junction_6	2664.78729607699	6102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGGCATTTCTTTT	-73520873	False	NA	-4	True	AATAAA	-18	NA	73521018	73515749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882
WTC11_00076837	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	7798.01575493957	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520069	False	NA	-1	True	ATTAAA	-17	NA	73520214	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
WTC11_00076838	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3343.83933110163	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73503429	True	NA	-1	True	ATTAAA	-17	NA	73521032	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
WTC11_00076839	chr6	-	2177	7	FSM	ENSG00000156508.19	ENST00000490569.6	2177	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3466.50355385493	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521228	False	NA	-1	True	ATTAAA	-17	NA	73521373	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
WTC11_00076840	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_7	7601.45137860031	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521695	False	NA	-1	True	ATTAAA	-17	NA	73521840	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
WTC11_00076841	chr6	-	1206	2	FSM	ENSG00000156508.19	ENST00000679031.1	1206	2	0	0	0	0	multi-exon	FALSE	canonical	3	20178	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73518666	False	NA	-5	True	ATTAAA	-13	NA	73518811	73517518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518611_73518697
WTC11_00076842	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3959.88425756781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503428	True	NA	-5	True	ATTAAA	-13	NA	73521031	73517518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
WTC11_00076843	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3818.71184287174	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503429	True	NA	-5	True	ATTAAA	-13	NA	73521032	73517518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
WTC11_00076844	chr6	-	2079	8	FSM	ENSG00000156508.19	ENST00000455918.2	2079	8	0	0	0	0	multi-exon	FALSE	canonical	2	198	junction_7	7737.9582842093	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73523670	True	NA	-5	True	ATTAAA	-13	NA	73523815	73517518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523446
WTC11_00076845	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3950.98728871096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	-73503429	True	NA	-7	True	ATTAAA	-11	NA	73521032	73517520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
WTC11_00076846	chr6	-	3302	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	-10	0	10	multi-exon	FALSE	canonical	3	67	junction_2	13.3626344707921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTCTGTGATGTTTC	-73652905	True	NA	-2	True	AATAAA	-25	NA	73653992	73593368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
WTC11_00076851	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	3012.52728894971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205773	True	NA	-15	True	AATAAA	-16	NA	75243787	75237786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
WTC11_00076852	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3274.23276848519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205787	True	NA	-15	True	AATAAA	-16	NA	75243801	75237786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
WTC11_00076853	chr6	-	914	2	FSM	ENSG00000112695.13	ENST00000481061.2	914	2	0	0	0	0	multi-exon	FALSE	canonical	3	6251	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTTGGAAATGAGTGAG	-75205795	True	NA	NA	False	NA	NA	NA	75243809	75240444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75241266_75243716
WTC11_00076854	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_6	64.6411031946564	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-75272647	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
WTC11_00076855	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	323.797714630601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
WTC11_00076857	chr6	-	11926	40	FSM	ENSG00000146247.14	ENST00000275034.5	11926	40	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_31	44.7387478094275	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGCTTTGCATTA	-79071825	True	NA	NA	False	AATAAA	-22	NA	79078254	78934418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
WTC11_00076858	chr6	-	5694	17	FSM	ENSG00000146247.14	ENST00000479165.1	5694	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_16	25.4594499891494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGAGACACTTCACTT	-78982924	False	NA	NA	False	AAAACA	-2	NA	78982943	78940545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885
WTC11_00076859	chr6	-	5834	40	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_21	54.9903703242883	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGAGACACTTCACTT	-79071863	True	NA	NA	False	AAAACA	-2	NA	79078292	78940545	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990983_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
WTC11_00076860	chr6	-	923	7	NNC	ENSG00000118418.14	novel	872	6	NA	NA	0	370	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1933.54174164063	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCTCCCACTTTTGA	-79191886	True	NA	NA	False	CATAAA	-15	NA	79234689	79200874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200929_79201247_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00076861	chr6	-	885	7	NNC	ENSG00000118418.14	novel	831	6	NA	NA	0	370	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1819.65595801942	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCTCCCACTTTTGA	-79191886	True	NA	NA	False	CATAAA	-15	NA	79234689	79200874	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200929_79201244_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00076863	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	779.148098887497	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00076864	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_1	1194.79052557342	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00076866	chr6	-	3013	6	FSM	ENSG00000118402.6	ENST00000369816.5	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	13.1209755734854	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTTTTTTGTTAAT	-79946259	True	NA	-4	True	AATAAA	-23	NA	79947553	79914813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79916884_79919419_79919548_79921624_79921797_79924951_79925033_79926193_79926382_79947179
WTC11_00076867	chr6	-	5641	1	FSM	ENSG00000218418.2	ENST00000401578.2	5914	1	436	-163	436	163	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTACATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	80069763	80064122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_80064100_80069800
WTC11_00076869	chr6	-	5664	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-81752476	True	NA	0	True	AATAAA	-22	NA	81752708	81745729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_81750472_81751589_81752179_81752375
WTC11_00076870	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_25	16.8436689492957	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-82246171	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
WTC11_00076872	chr6	-	4437	24	FSM	ENSG00000005700.15	ENST00000369751.2	4437	24	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_20	13.7976190379106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTTTATTAAGCAGAAAT	-82246181	True	NA	NA	False	AATAAA	-24	NA	82247754	82191330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
WTC11_00076873	chr6	-	4632	7	NNC	ENSG00000118420.17	novel	1925	10	NA	NA	11946	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	40.8642739919467	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGTTACAGAGTTGTT	NA	False	NA	-10	True	AATAAA	-14	NA	83046023	82892399	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83025880_83038415_83038486_83044427
WTC11_00076874	chr6	-	1936	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	-11	0	11	multi-exon	FALSE	canonical	3	88	junction_5	11.4255507471869	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGTGTACCAGCAC	-83062913	True	NA	11	True	AATAAA	-35	NA	83065841	82892378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
WTC11_00076878	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	40.239560412885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-83185144	True	NA	0	True	AATAAA	-21	NA	83193265	83164872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
WTC11_00076880	chr6	-	1949	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	3	0	-3	multi-exon	FALSE	canonical	3	29	junction_1	128.85036541146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGGTCTGTTTTCCGT	-83185147	True	NA	-4	True	ATTAAA	-19	NA	83193268	83169523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
WTC11_00076884	chr6	-	5398	27	FSM	ENSG00000135315.12	ENST00000403245.8	5155	27	0	-243	0	234	multi-exon	FALSE	canonical	3	16	junction_22	9.68719340037822	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTTTTTGTACTTCT	-84226717	True	NA	13	True	NA	NA	NA	84227643	84124006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
WTC11_00076886	chr6	-	3534	28	FSM	ENSG00000135317.14	ENST00000682454.1	3795	28	0	261	0	-173	multi-exon	FALSE	canonical	1	2	junction_22	58.5305894723268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAAAAGATTATTTT	-85593770	False	NA	NA	False	AAGAAA	-30	NA	85593785	85505255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00076889	chr6	-	3540	29	FSM	ENSG00000135317.14	ENST00000682497.1	4212	29	0	672	0	45	multi-exon	FALSE	canonical	3	46	junction_27	52.082682989137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGTTTGAAAACTGAA	-85593886	False	NA	NA	False	NA	NA	NA	85593901	85505447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
WTC11_00076893	chr6	-	5153	40	FSM	ENSG00000271793.2	ENST00000682083.1	5825	40	0	672	0	80	multi-exon	FALSE	canonical	1	38	junction_28	361.639993017418	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGTTTGAAAACTGAA	-85642963	False	NA	NA	False	NA	NA	NA	85642978	85505447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85612831_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076894	chr6	-	3452	29	FSM	ENSG00000135317.14	ENST00000314673.8	3452	29	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_14	40.6615416504067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	-85592177	True	NA	NA	False	AATAAA	-29	NA	85593858	85505495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00076895	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_22	58.1766138581475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	-85593898	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00076898	chr6	-	3463	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	-270	0	0	multi-exon	FALSE	canonical	3	59	junction_28	50.6366986986913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85594122	True	NA	NA	False	TATAAA	-1	NA	85594156	85505527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
WTC11_00076899	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	45.9132300253209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	-85592169	True	NA	-15	True	AATAAA	-27	NA	85593850	85505801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00076900	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_10	290.868630140825	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	-85642907	False	35266	-1	True	AATAAA	-21	NA	85642922	85607778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
WTC11_00076901	chr6	-	6591	13	FSM	ENSG00000135316.19	ENST00000676637.1	6591	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	303.906052734869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAATTTTTGATGGA	-85643763	False	NA	NA	False	AATAAA	-11	NA	85643778	85608114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796_85642891_85643749
WTC11_00076902	chr6	-	6511	12	FSM	ENSG00000135316.19	ENST00000678528.1	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	295.841927861809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAATTTTTGATGGA	-85643777	False	NA	NA	False	AATAAA	-11	NA	85643792	85608114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
WTC11_00076903	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	283.999185192639	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642963	False	NA	-27	True	AATAAA	-17	NA	85642978	85608334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076904	chr6	-	6443	12	FSM	ENSG00000135316.19	ENST00000355238.11	6443	12	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_1	172.22990592771	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642976	False	NA	-27	True	AATAAA	-17	NA	85642991	85608334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076905	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	365.932252231394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85641637	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
WTC11_00076906	chr6	-	5951	6	FSM	ENSG00000135316.19	ENST00000677646.1	5951	6	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	64.6201207055511	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGTAGAAATCTTCTG	-85638188	False	NA	26	True	AATAAA	-39	NA	85638203	85611247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966
WTC11_00076908	chr6	-	2161	12	FSM	ENSG00000135316.19	ENST00000677059.1	2161	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	411.422888751258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-85642159	False	10945	-16	True	AATAAA	-26	NA	85642174	85612568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85641989
WTC11_00076909	chr6	-	2158	12	FSM	ENSG00000135316.19	ENST00000676542.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	316.77734183101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-85642963	False	NA	-16	True	AATAAA	-26	NA	85642978	85612568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076911	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	286.441686048265	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	-85642996	False	NA	NA	False	AATAAA	-17	NA	85643011	85613384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
WTC11_00076912	chr6	-	8399	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	-4	-5641	0	0	multi-exon	FALSE	canonical	3	688	junction_10	138.500685918879	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642875	False	NA	-27	True	AATAAA	-17	NA	85642890	85608334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076913	chr6	-	2317	9	FSM	ENSG00000135316.19	ENST00000678816.1	2317	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	352.419760371067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85642936	False	35266	40	True	AATAAA	-28	NA	85642951	85614205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
WTC11_00076914	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	410.507003594336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85642954	False	35266	40	True	AATAAA	-28	NA	85642969	85614205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
WTC11_00076915	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	294.129580287328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85641664	True	NA	40	True	AATAAA	-28	NA	85643867	85614205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
WTC11_00076917	chr6	-	2012	6	FSM	ENSG00000203875.13	ENST00000666667.1	2012	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2719.86639377746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTATTTTTTAACCT	-85678738	False	NA	NA	False	NA	NA	NA	85678748	85665076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135
WTC11_00076918	chr6	-	5169	5	FSM	ENSG00000203875.13	ENST00000658077.1	5169	5	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	567.988996372289	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAAACTCCCAGTACTT	-85678740	False	NA	NA	False	NA	NA	NA	85678750	85672866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135
WTC11_00076919	chr6	-	3657	5	FSM	ENSG00000203875.13	ENST00000655116.1	3657	5	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	2693.0121611311	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCAGACACTGCAGATT	-85678738	False	NA	NA	False	NA	NA	NA	85678748	85673790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677953_85678033_85678135_85678189_85678693
WTC11_00076920	chr6	-	1450	6	FSM	ENSG00000203875.13	ENST00000654795.1	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_5	1195.32974530043	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGAAGGATTCTTGAAA	-85678738	False	NA	2	True	AATAAA	-44	NA	85678748	85676078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
WTC11_00076921	chr6	-	1831	5	FSM	ENSG00000203875.13	ENST00000658919.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	2804.67309815244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATCGAAATTAGTACT	-85678738	False	NA	-115	True	AATAGA	-19	NA	85678748	85676195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677869_85677953_85678033_85678135
WTC11_00076923	chr6	-	1147	4	FSM	ENSG00000203875.13	ENST00000658836.1	1129	4	0	-18	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	290.524812480219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	-85678738	False	NA	1	True	ATTAAA	-33	NA	85678748	85676989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953
WTC11_00076924	chr6	-	884	3	FSM	ENSG00000203875.13	ENST00000663448.1	871	3	0	-13	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2973.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	-85678738	False	NA	1	True	ATTAAA	-33	NA	85678748	85676989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85678135
WTC11_00076927	chr6	-	737	6	FSM	ENSG00000203875.13	ENST00000669678.1	518	6	12	-231	0	0	multi-exon	FALSE	canonical	3	152	junction_5	2662.12385887659	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTATTAAGTATGG	-85586093	True	NA	NA	False	AATAGA	-8	NA	85678736	85676775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678697
WTC11_00076928	chr6	-	379	4	FSM	ENSG00000203875.13	ENST00000667421.1	365	4	0	-14	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2469.97251446696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	-85678738	False	NA	1	True	ATTAAA	-33	NA	85678748	85676989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678693
WTC11_00076930	chr6	-	1259	4	FSM	ENSG00000203875.13	ENST00000657398.1	1258	4	0	-1	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	655.77045441899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTGTTATTACTTT	-85678738	False	NA	-7	True	AATAAA	-21	NA	85678748	85677076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135
WTC11_00076932	chr6	-	1187	4	FSM	ENSG00000203875.13	ENST00000661360.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_2	464.188419598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135
WTC11_00076933	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1073.88369365588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
WTC11_00076935	chr6	-	452	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	-1	0	0	multi-exon	FALSE	canonical	3	69	junction_2	2648.09614629076	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTTTTTGTTATTA	-85678738	False	NA	-11	True	AATAAA	-17	NA	85678748	85677080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
WTC11_00076938	chr6	-	420	6	NNC	ENSG00000203875.13	novel	456	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2745.65351055081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-85586093	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_85677190_85677422_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
WTC11_00076940	chr6	-	3910	1	FSM	ENSG00000272008.1	ENST00000606274.1	4127	1	211	6	211	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCATAAATGTGTTATACA	-87154984	False	NA	NA	False	AATAAA	-18	NA	87155074	87151164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87151200_87155100
WTC11_00076942	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	-87328990	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87284940_87322865_87323044_87329137
WTC11_00076943	chr6	-	2435	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	-193	0	8	multi-exon	FALSE	canonical	3	399	junction_19	60.3226780304434	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATCAATTTTCTTGTA	-87583435	True	NA	-5	True	AATAAA	-19	NA	87589987	87513744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
WTC11_00076946	chr6	-	1910	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	-12	0	12	multi-exon	FALSE	canonical	3	533	junction_3	16.1012421881046	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTGAAGTTAATTTTC	-87693706	True	NA	0	True	AATAAA	-33	NA	87702233	87674847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
WTC11_00076948	chr6	-	4719	15	FSM	ENSG00000111880.16	ENST00000369475.7	1725	15	-152	-2842	0	20	multi-exon	TRUE	canonical	3	19	junction_4	56.960109564788	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGCATTGCATTT	-88957468	True	NA	NA	False	AATAAA	-34	NA	88963561	88609876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
WTC11_00076950	chr6	-	3599	5	NNC	ENSG00000154548.9	novel	3589	5	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	non_canonical	3	61	junction_3	13.0575648572006	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTTCTTTTAAAGAGAC	-89117173	True	NA	9	True	AATAAA	-29	NA	89118071	89095948	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_89098948_89105118_89105261_89105426_89105529_89107151_89107259_89117822
WTC11_00076952	chr6	-	6070	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	-1906	0	1906	multi-exon	FALSE	canonical	3	152	junction_2	14.6747040438814	3882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACCATCCTACAATGGT	-89352657	False	2077	-12	True	AATAAA	-20	NA	89352722	89324718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
WTC11_00076953	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	19.2353840616713	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-89412253	False	NA	21	True	GATAAA	-39	NA	89412273	89364615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
WTC11_00076955	chr6	-	892	5	FSM	ENSG00000025039.15	ENST00000492783.1	892	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	73.2273855876338	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGGTTATTGACATC	-89411485	False	2261	NA	False	NA	NA	NA	89411505	89377704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411333
WTC11_00076956	chr6	-	2824	3	FSM	ENSG00000083099.11	ENST00000517396.5	2835	3	11	0	11	0	multi-exon	FALSE	canonical	3	24	junction_2	18	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAAAGTGCC	-89638343	False	NA	NA	False	NA	NA	NA	89638390	89634806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637724_89637883_89638271
WTC11_00076957	chr6	-	5347	3	FSM	ENSG00000083099.11	ENST00000523377.2	5347	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	36	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCATTTTATTACAA	-89636107	True	NA	2	True	AATAAA	-23	NA	89638747	89632223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637741_89637883_89638671
WTC11_00076958	chr6	-	1458	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	2	-783	0	727	multi-exon	FALSE	canonical	3	60	junction_1	124.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGAGGTGTAGGACTGA	-89636107	True	NA	NA	False	AATAAA	-16	NA	89638747	89636129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637724_89637883_89638671
WTC11_00076962	chr6	-	4640	16	FSM	ENSG00000135341.18	ENST00000369325.7	4633	16	0	-7	0	7	multi-exon	FALSE	canonical	2	8	junction_1	131.269019785917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAATGACTTGTATCA	-90586749	False	NA	-1	True	AATAAA	-34	NA	90586883	90513565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
WTC11_00076964	chr6	-	4837	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	-7	0	7	multi-exon	FALSE	canonical	3	313	junction_5	32.9176750900384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAATGACTTGTATCA	-90581617	True	NA	-1	True	AATAAA	-34	NA	90587045	90513565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
WTC11_00076965	chr6	-	5209	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	-217	-60	-217	54	multi-exon	FALSE	canonical	3	79	junction_5	102.922737253485	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCGTGTTTACCTTAC	NA	False	NA	46	True	NA	NA	NA	90587289	90513518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
WTC11_00076966	chr6	-	7250	5	FSM	ENSG00000135341.18	ENST00000479630.1	2214	5	-2921	-2115	-2921	54	multi-exon	TRUE	canonical	3	361	junction_4	31.6583322365535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCGTGTTTACCTTAC	-90540106	False	NA	46	True	NA	NA	NA	90540139	90513518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336
WTC11_00076968	chr6	-	6621	17	FSM	ENSG00000135333.15	ENST00000369303.9	6621	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	8.35164654424503	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCCAATCATTGGT	-93417927	True	NA	NA	False	AATAAA	-28	NA	93419559	93240019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259480_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
WTC11_00076969	chr6	-	1939	8	FSM	ENSG00000135333.15	ENST00000679915.1	2244	8	0	305	0	-305	multi-exon	FALSE	canonical	2	11	junction_1	11.7820340574373	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACACAAAGTTGTTCT	-93417921	True	NA	NA	False	NA	NA	NA	93419553	93264593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93264703_93269491_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
WTC11_00076970	chr6	-	1880	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	5	0	-5	multi-exon	FALSE	canonical	3	41	junction_2	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACTAGTGTCTCTTTTT	-93417915	True	NA	NA	False	AATAAA	-12	NA	93419547	93409658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93411171_93414702_93414768_93419244
WTC11_00076971	chr6	-	6766	2	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	449	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACAACATTAATCTT	-93830960	False	NA	NA	False	NA	NA	NA	93834793	93811779	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_93817014_93833261
WTC11_00076972	chr6	-	5572	3	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	383	junction_2	33	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACAACATTAATCTT	-93831553	True	NA	NA	False	NA	NA	NA	93835386	93811779	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_93817014_93833261_93833364_93835150
WTC11_00076973	chr6	-	5099	2	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATTATACTTTAA	-93831555	True	NA	NA	False	NA	NA	NA	93835388	93812152	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_93817014_93835150
WTC11_00076975	chr6	-	1122	3	NNC	ENSG00000289178.1	novel	1964	10	NA	NA	182836	1504	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5.5	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGCAAAACTGGGCAGAA	-94540666	False	NA	-16	True	AATAAA	-12	NA	94553102	94546184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_94546455_94547860_94548489_94552878
WTC11_00076978	chr6	-	8643	25	FSM	ENSG00000146263.12	ENST00000275053.8	8643	25	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_24	18.9054206659242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-97280965	True	NA	-1	True	AATAAA	-18	NA	97283176	97142160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97282986
WTC11_00076979	chr6	-	8574	25	FSM	ENSG00000146263.12	ENST00000683635.1	8574	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	16.5023146524628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-97281005	True	NA	-1	True	AATAAA	-18	NA	97283216	97142160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
WTC11_00076982	chr6	-	3885	5	NNC	ENSG00000146263.12	novel	8380	5	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	22.0042609510067	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-97272734	False	NA	-4	True	AATAAA	-15	NA	97272746	97258662	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97262179_97263334_97263449_97267881_97268003_97269901_97269993_97272703
WTC11_00076986	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	11.8769410369447	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	-98946027	True	NA	1	True	AATAAA	-22	NA	98947946	98868534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
WTC11_00076988	chr6	-	11150	6	FSM	ENSG00000146267.12	ENST00000389677.6	11528	6	1	377	1	-377	multi-exon	FALSE	canonical	3	17	junction_3	26.0921444116807	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTGTCATGTTAGTG	-99349481	True	NA	NA	False	NA	NA	NA	99349673	99271544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106
WTC11_00076990	chr6	-	1771	5	NIC	ENSG00000146267.12	novel	11528	6	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	25.6063956854533	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	-99349448	True	NA	-41	True	AATAAA	-14	NA	99349640	99280666	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99281454_99291703_99291821_99333350_99333548_99342897_99343034_99349106
WTC11_00076991	chr6	-	1333	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	-8	0	8	multi-exon	FALSE	canonical	3	256	junction_3	32.1683937360191	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGAGTGTAAGTTCCTC	-99391385	True	NA	1	True	AATAAA	-25	NA	99394195	99369392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
WTC11_00076992	chr6	-	1194	6	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	115.841961309363	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCGTGATCTAGGAGTG	-99391383	True	NA	-9	True	AATAAA	-15	NA	99394193	99369402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99394073
WTC11_00076993	chr6	-	5022	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	221	0	200	multi-exon	FALSE	canonical	3	100	junction_11	201.824447077198	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTAGTGTTGCCTTAC	-99412935	True	NA	NA	False	NA	NA	NA	99425329	99397849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
WTC11_00076994	chr6	-	5092	12	FSM	ENSG00000132424.17	ENST00000481229.2	5073	12	0	-19	0	0	multi-exon	FALSE	canonical	3	5	junction_9	219.368854249814	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTATATGTTTTCTG	-99412898	True	NA	-3	True	AATAAA	-18	NA	99425292	99398049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412735_99414571_99414691_99416348_99416429_99425214
WTC11_00076995	chr6	-	5113	12	FSM	ENSG00000132424.17	ENST00000369239.10	5113	12	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	89.8941526334497	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTATATGTTTTCTG	-99412914	True	NA	-3	True	AATAAA	-18	NA	99425308	99398049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00076996	chr6	-	4790	13	NIC	ENSG00000132424.17	novel	5189	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_11	180.110671995489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCCCAAAATATAAATAAA	-99412864	True	NA	-40	True	AATAAA	-38	NA	99425258	99398086	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414687_99416348_99416429_99425214
WTC11_00076998	chr6	-	4300	13	NIC	ENSG00000132424.17	novel	5113	12	NA	NA	0	374	combination_of_known_junctions	FALSE	canonical	3	572	junction_4	90.281465736637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGCCAAAAGTAGTATTT	-99412898	True	NA	33	True	NA	NA	NA	99425292	99398614	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00076999	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	223.265990422498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-99412921	True	NA	-48	True	NA	NA	NA	99425315	99398988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00077003	chr6	-	4856	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	38	-2472	0	0	multi-exon	FALSE	canonical	3	618	junction_5	76.6234950912578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-99412876	True	NA	-48	True	NA	NA	NA	99425270	99398988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00077008	chr6	-	5880	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_5	35.4342316847213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGTATTAACAAAAATTT	-99510849	True	NA	0	True	AATAAA	-16	NA	99515423	99432322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
WTC11_00077009	chr6	-	6255	18	FSM	ENSG00000123552.18	ENST00000327681.10	6255	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	38.8830203733764	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTGGTCCTGGAATTT	-99510802	True	NA	-1	True	AATAAA	-23	NA	99515376	99432438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
WTC11_00077011	chr6	-	4865	1	Genic_Genomic	ENSG00000123552.18	novel	NA	NA	NA	NA	1075	3501	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGTCTGTGACTTAT	NA	False	NA	NA	False	AATAAA	-36	NA	99463827	99458962	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_99459000_99463800
WTC11_00077012	chr6	-	1652	13	NNC	ENSG00000123552.18	novel	715	8	NA	NA	0	3499	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.7711334456985	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAGTCTGTGACTT	-99510217	False	NA	NA	False	AATAAA	-34	NA	99510230	99458964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99459299_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
WTC11_00077013	chr6	-	1741	14	FSM	ENSG00000123552.18	ENST00000506871.5	1741	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	45.8291140249044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGTGTAGTGATTT	-99510217	False	NA	NA	False	ATTAAA	-1	NA	99510230	99462463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468099_99468171_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
WTC11_00077015	chr6	-	2144	13	NNC	ENSG00000112237.13	novel	2212	13	NA	NA	0	64170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	376.595273470074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGTTTATTAAATTTTC	-99558738	True	NA	NA	False	AAAACA	-3	NA	99568623	99478216	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99478248_99542389_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077016	chr6	-	2169	13	NNC	ENSG00000112237.13	novel	2186	13	NA	NA	0	64170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.595273470074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGTTTATTAAATTTTC	-99558767	True	NA	NA	False	AAAACA	-3	NA	99568652	99478216	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99478244_99542389_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077017	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	16.4527771987291	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	-99510915	True	NA	-5	True	AATAAA	-21	NA	99515489	99482261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
WTC11_00077019	chr6	-	4319	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	-2166	0	2166	multi-exon	FALSE	canonical	3	1180	junction_7	91.1844919394078	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTGAACACTTATT	-99558775	True	NA	NA	False	NA	NA	NA	99568660	99540220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077020	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	449.835425152602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	-99568324	False	389	-45	True	AATAAA	-16	NA	99568713	99542501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077024	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	349.077035709174	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	-99558777	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077029	chr6	-	1847	5	FSM	ENSG00000112237.13	ENST00000482541.2	1704	5	5	-148	0	148	multi-exon	FALSE	canonical	3	1272	junction_1	34.6148450812654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAATAGTTTAGTCAAA	-99558738	True	NA	NA	False	NA	NA	NA	99568623	99557091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00077036	chr6	-	2496	13	FSM	ENSG00000112249.14	ENST00000522650.5	2828	13	0	332	0	-332	multi-exon	FALSE	canonical	3	148	junction_2	70.5578958492008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTTATTTTATCTGCT	-100870418	True	NA	NA	False	AGTAAA	-14	NA	100881364	100715461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
WTC11_00077039	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	137.18114544888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-100870365	True	NA	-5	True	AATAAA	-20	NA	100881311	100856302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
WTC11_00077040	chr6	-	4548	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	27	0	-13	0	multi-exon	FALSE	canonical	3	64	junction_18	14.2461482871966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	-104857039	True	NA	-8	True	AATAAA	-16	NA	104859892	104728093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
WTC11_00077045	chr6	-	760	2	FSM	ENSG00000203809.7	ENST00000659952.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTATCTATTGAGC	-104940325	False	NA	NA	False	AATAAA	-20	NA	104940374	104936119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104936683_104940177
WTC11_00077046	chr6	-	546	3	FSM	ENSG00000203809.7	ENST00000369123.3	575	3	29	0	29	0	multi-exon	FALSE	canonical	2	2	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAATATCATTCTGCA	-104940449	False	NA	NA	False	NA	NA	NA	104940498	104936293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104936683_104940177_104940214_104940377
WTC11_00077048	chr6	-	1649	8	FSM	ENSG00000112276.14	ENST00000336775.9	1663	8	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_7	5.44358825235933	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACACACACACACACACA	-105136450	False	NA	NA	False	AAAAAG	-29	NA	105136671	105100612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136592
WTC11_00077049	chr6	-	1737	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	142	0	-142	multi-exon	TRUE	canonical	2	4	junction_2	8.52447456836295	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCTCCAGTGAAAGCAA	-105179733	True	NA	NA	False	NA	NA	NA	105180014	105158041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
WTC11_00077051	chr6	-	6947	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	303	0	-303	multi-exon	FALSE	canonical	3	362	junction_7	33.0728941359932	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGGTATAGTCTG	-105396897	True	NA	NA	False	AAAACA	-25	NA	105403082	105273520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
WTC11_00077052	chr6	-	957	2	FSM	ENSG00000085377.15	ENST00000448705.1	961	2	0	4	0	-4	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGGCTGCTGCTTAT	-105323731	False	NA	-4	True	AATAAA	-24	NA	105323768	105322258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105323112_105323664
WTC11_00077053	chr6	-	2357	11	NIC	ENSG00000085377.15	novel	961	2	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	107.332939957871	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGGCTGCTGCTTAT	-105396893	True	NA	-4	True	AATAAA	-24	NA	105403078	105322258	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_105323112_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
WTC11_00077054	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	132.717438068051	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319368	False	53	NA	False	AATAAA	-1	NA	106325417	106184475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
WTC11_00077055	chr6	-	2712	5	FSM	ENSG00000057663.16	ENST00000360666.6	2712	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	188.070964000294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319608	True	NA	NA	False	AATAAA	-1	NA	106325657	106184475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106316100_106316267_106325525
WTC11_00077056	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	50.2008211982592	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319711	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
WTC11_00077057	chr6	-	3103	7	FSM	ENSG00000057663.16	ENST00000369070.5	3088	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	94	junction_5	122.463259796561	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319757	True	NA	NA	False	AATAAA	-1	NA	106325806	106184475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
WTC11_00077059	chr6	-	2170	2	FSM	ENSG00000272398.6	ENST00000606017.2	2156	2	0	-14	0	14	multi-exon	FALSE	canonical	3	2828	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCAGTATGAGGAATA	-106942294	True	NA	3	True	AATAAA	-36	NA	106974729	106969816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971835_106974577
WTC11_00077060	chr6	-	2527	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	-14	0	14	multi-exon	FALSE	canonical	3	173	junction_2	1327.5	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCAGTATGAGGAATA	-106975404	False	NA	3	True	AATAAA	-36	NA	106975465	106969816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971835_106974577_106974755_106975133
WTC11_00077061	chr6	-	4278	3	FSM	ENSG00000272398.6	ENST00000621311.1	257	3	-465	-3556	0	0	multi-exon	FALSE	canonical	3	11	junction_1	81	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-106975094	True	NA	-11	True	AATAAA	-22	NA	106975627	106969830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106973438_106974577_106974755_106975133
WTC11_00077064	chr6	-	6639	5	FSM	ENSG00000178409.14	ENST00000429433.3	6654	5	20	-5	20	0	multi-exon	FALSE	canonical	1	2	junction_3	62.7987858162879	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTCGTAACATGTTA	-107114402	False	NA	-48	True	TATAAA	-21	NA	107114412	107065181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107070951_107098550_107098754_107099248_107099297_107106076_107106163_107113879
WTC11_00077067	chr6	-	1246	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	-8	-2	-8	2	multi-exon	FALSE	canonical	3	38	junction_1	25.4950975679639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTATCTGTTA	-107458573	True	NA	-2	True	AATAAA	-17	NA	107459572	107264183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
WTC11_00077068	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	364	junction_6	45.3204975700841	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-107945397	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
WTC11_00077072	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	-107957920	False	NA	NA	False	AATAAA	-28	NA	107958042	107954583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107954767_107955964_107956107_107957885
WTC11_00077075	chr6	-	3961	7	Fusion	ENSG00000081087.15_ENSG00000271734.1	novel	4471	6	NA	NA	0	-3	multi-exon	FALSE	canonical	2	3	junction_1	87.3493941974795	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGTATGATGTTAGAA	-108070280	True	NA	NA	False	GATAAA	-15	NA	108074741	108030251	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_108030900_108042566_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
WTC11_00077076	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	18.8297636735037	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-108070280	True	NA	50	True	ATTAAA	-20	NA	108074741	108041408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
WTC11_00077077	chr6	-	4106	7	NIC	ENSG00000081087.15	novel	4471	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	83.69869904737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTAATGACAAATAAC	-108070280	True	NA	-13	True	AATAAA	-19	NA	108074741	108041471	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_108042265_108042566_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
WTC11_00077078	chr6	-	1530	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	5	0	-5	multi-exon	FALSE	canonical	3	879	junction_1	47.7516724547133	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACCATTTCTCCTAT	-108254386	True	NA	NA	False	ATTAAA	-15	NA	108261040	108211226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
WTC11_00077079	chr6	-	1072	3	FSM	ENSG00000112335.15	ENST00000426155.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	435.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	-108260809	False	NA	-4	True	AATAAA	-26	NA	108260964	108211512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108260759
WTC11_00077082	chr6	-	259	1	FSM	ENSG00000228834.1	ENST00000447543.1	259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGAGGACACGCTCT	NA	False	NA	NA	False	NA	NA	NA	108907873	108907614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108907600_108907900
WTC11_00077083	chr6	-	2678	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	3	-5	3	5	multi-exon	FALSE	canonical	3	160	junction_9	10.0492613818622	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	-109005924	True	NA	0	True	AATAAA	-23	NA	109009552	108986436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
WTC11_00077084	chr6	-	3509	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	27	2128	27	5	multi-exon	FALSE	canonical	3	16	junction_9	50.3641063643201	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	-109094650	True	NA	0	True	AATAAA	-23	NA	109094819	108986436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
WTC11_00077086	chr6	-	658	2	FSM	ENSG00000080546.14	ENST00000523632.1	920	2	0	262	0	-262	multi-exon	FALSE	canonical	3	178	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGTTAGTACCCTAAAAA	-108997844	False	NA	NA	False	NA	NA	NA	109001472	109000200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109000674_109001287
WTC11_00077087	chr6	-	4959	2	FSM	ENSG00000135535.17	ENST00000415861.2	4963	2	4	0	4	0	multi-exon	FALSE	canonical	3	769	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109372854	False	NA	0	True	AATAAA	-22	NA	109372865	109366513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109370410
WTC11_00077089	chr6	-	3107	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	-171	0	-148	0	multi-exon	FALSE	canonical	3	89	junction_1	291.649189952587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109382604	False	NA	-4	True	AATAAA	-18	NA	109382615	109366517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
WTC11_00077099	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.4020200695306	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	-109479910	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
WTC11_00077103	chr6	-	3289	11	FSM	ENSG00000112290.13	ENST00000392589.6	2886	11	-253	-150	0	150	multi-exon	FALSE	canonical	3	18	junction_9	126.821764693605	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTATGTCATTTTCCC	-110179821	False	NA	NA	False	NA	NA	NA	110179923	110099668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179438
WTC11_00077105	chr6	-	2815	11	FSM	ENSG00000112290.13	ENST00000392586.5	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	128.817700647077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180001	110099818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179840
WTC11_00077106	chr6	-	3075	10	FSM	ENSG00000112290.13	ENST00000359451.6	3075	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	102.92392012226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180004	110099818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110179438
WTC11_00077107	chr6	-	3122	10	FSM	ENSG00000112290.13	ENST00000392588.5	3122	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	122.57524773797	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180004	110099818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110178597_110178743_110179438
WTC11_00077110	chr6	-	1426	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	-343	0	1	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	-110814738	True	NA	NA	False	AATAAA	-19	NA	110815468	110813158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110814125_110815008
WTC11_00077114	chr6	-	3397	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	-612	0	612	multi-exon	FALSE	canonical	2	4	junction_8	35.5996254661946	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTATGAAGTGTT	-111606264	False	NA	NA	False	NA	NA	NA	111606278	111558327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
WTC11_00077115	chr6	-	1485	5	FSM	ENSG00000056972.20	ENST00000528599.1	1663	5	0	178	0	-178	multi-exon	FALSE	canonical	3	71	junction_3	5.02493781056044	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTTTGTCCAAATA	-111605930	True	NA	NA	False	NA	NA	NA	111605962	111572894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
WTC11_00077117	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	54.8177183812014	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-111871735	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
WTC11_00077118	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	44.9882298874091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-111872120	False	NA	2	True	ATTAAA	-23	NA	111873452	111660331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
WTC11_00077128	chr6	-	611	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	8	0	8	0	multi-exon	FALSE	canonical	3	18	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-112254462	True	NA	NA	False	AATAAA	-23	NA	112254559	112253781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112254292_112254458
WTC11_00077129	chr6	-	653	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	-8	0	6	multi-exon	FALSE	canonical	3	7	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAGAGTTGAAAGTTGA	-112254481	True	NA	NA	False	AATAAA	-29	NA	112254578	112253775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112254292_112254441
WTC11_00077131	chr6	-	2073	15	NNC	ENSG00000196591.12	novel	2084	15	NA	NA	0	35470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	826.773023660703	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGATGTGGTGGCACAC	-113920961	True	NA	NA	False	AAAAAG	-12	NA	113971136	113897557	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_113897597_113940718_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
WTC11_00077133	chr6	-	6054	8	FSM	ENSG00000196591.12	ENST00000523334.1	4810	8	227	-1471	227	1471	multi-exon	FALSE	canonical	3	2939	junction_1	171.781303774685	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGATGTTCTGGCATC	-113956301	False	NA	NA	False	AAGAAA	-15	NA	113956375	113939246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113949261_113953276_113953419_113956012
WTC11_00077134	chr6	-	3417	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	54	-1471	40	1471	multi-exon	FALSE	canonical	3	9	junction_13	854.097558276134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGATGTTCTGGCATC	-113970652	False	NA	NA	False	AAGAAA	-15	NA	113970670	113939246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
WTC11_00077135	chr6	-	3555	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	-1471	0	1471	multi-exon	FALSE	canonical	3	25	junction_14	1102.96378092883	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGATGTTCTGGCATC	-113920982	True	NA	NA	False	AAGAAA	-15	NA	113971157	113939246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
WTC11_00077144	chr6	-	3885	5	FSM	ENSG00000249853.9	ENST00000312719.10	3869	5	0	-16	0	16	multi-exon	FALSE	canonical	3	28	junction_1	13.4233937586588	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTCAAGCCAGCGCCTT	-114341681	True	NA	7	True	AATAAA	-33	NA	114343023	114055579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_114058191_114062738_114062878_114168350_114168463_114228584_114228779_114342194
WTC11_00077146	chr6	-	1387	3	ISM	ENSG00000249853.9	ENST00000312719.10	3869	5	12	112491	12	-610	5prime_fragment	FALSE	canonical	3	52	junction_1	3	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTGCGTGTGTTGT	-114341669	True	NA	-5	True	AATGAA	-33	NA	114343011	114168086	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_114168463_114228584_114228779_114342194
WTC11_00077147	chr6	-	7140	2	Antisense	novelGene_ENSG00000228624.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTAACTGATTTACACA	-114412070	False	NA	NA	False	TATAAA	-17	NA	114412083	114400318	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_114402273_114406897
WTC11_00077148	chr6	-	4137	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	-32	7	-32	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATTCTGTGTTGTCT	-116251420	True	NA	-10	True	AATAAA	-8	NA	116254107	116249970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116250000_116254100
WTC11_00077149	chr6	-	5094	1	FSM	ENSG00000189241.8	ENST00000368608.4	5073	1	0	-21	0	21	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGATAAGGGTTATCTTG	-116274316	True	NA	16	True	ATTAAA	-37	NA	116279930	116274836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116274800_116279900
WTC11_00077150	chr6	-	552	1	FSM	ENSG00000217241.1	ENST00000402326.1	552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15095	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCACATTGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	116453565	116453013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116453000_116453600
WTC11_00077154	chr6	-	1052	4	FSM	ENSG00000183807.8	ENST00000368557.6	1032	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	24	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGTGTGTGGATT	-116765356	True	NA	-3	True	TATAAA	-16	NA	116765739	116752196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116752696_116761976_116762086_116765146_116765256_116765404
WTC11_00077156	chr6	-	4597	9	FSM	ENSG00000047932.14	ENST00000368498.7	4597	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	65.6900867711407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-117596672	True	NA	-4	True	AATAAA	-24	NA	117602511	117560268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
WTC11_00077160	chr6	-	1830	6	FSM	ENSG00000111860.14	ENST00000419517.2	2079	6	249	0	-17	0	multi-exon	FALSE	canonical	3	15	junction_4	11.4786758818254	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTGTCATTTACC	-118650959	True	NA	NA	False	AATAAA	-37	NA	118651608	118491631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
WTC11_00077164	chr6	-	2586	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	-51	-93	-3	93	multi-exon	FALSE	canonical	3	21	junction_6	14.2409815516893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGAAAGTGAATTGCT	-118934065	True	NA	92	True	NA	NA	NA	118935165	118910503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
WTC11_00077166	chr6	-	4140	18	FSM	ENSG00000111879.20	ENST00000338891.12	4128	18	-79	67	-79	0	multi-exon	FALSE	canonical	2	40	junction_12	10.0765238142889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTTTTATTTTTTTC	-119077857	True	NA	-1	True	AATAAA	-17	NA	119078743	118959829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119011308_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
WTC11_00077168	chr6	-	4584	2	Genic_Genomic	ENSG00000279453.1	novel	2435	1	NA	NA	-2125	16088	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAATAAACTAAATCG	-122441333	False	NA	NA	False	NA	NA	NA	122441348	122420700	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_122420730_122436793
WTC11_00077169	chr6	-	3152	11	NNC	ENSG00000111897.7	novel	3125	10	NA	NA	0	22650	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.258914815591	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAATAAACTAAATCG	-122468991	True	NA	NA	False	NA	NA	NA	122471807	122420700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_122420731_122443353_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
WTC11_00077172	chr6	-	2684	1	NIC	ENSG00000186439.14	novel	4627	41	NA	NA	16486	1152	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	-123499705	False	NA	1	True	AATAAA	-28	NA	123499720	123497036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_123497000_123499700
WTC11_00077174	chr6	-	3255	9	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49209	2057	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	89.0441428449957	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTTTATTTTTCATT	-123583210	True	NA	NA	False	TATAAA	-2	NA	123587700	123501593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123580483_123580601_123587458
WTC11_00077175	chr6	-	1513	6	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49211	198	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	99.9811982324677	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTATGCTCAAGCTGGT	-123583208	True	NA	-8	True	AATAAA	-19	NA	123587698	123528482	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123529294_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
WTC11_00077176	chr6	-	2766	3	NNC	ENSG00000186439.14	novel	4627	41	NA	NA	49275	-36907	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	149	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCGTGCCTTCCAAAACT	-123583144	True	NA	-23	True	AATAAA	-21	NA	123587634	123565620	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123568001_123570922_123571133_123587458
WTC11_00077177	chr6	-	1465	6	FSM	ENSG00000111906.18	ENST00000398153.7	1446	6	0	-19	0	19	multi-exon	FALSE	canonical	3	470	junction_4	218.357138651339	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAGTGCAAAAAAGAAT	-125292970	True	NA	NA	False	GATAAA	-26	NA	125301967	125275330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125301848
WTC11_00077184	chr6	-	4584	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATCTATCTTGGAGAGT	-125702452	True	NA	-8	True	ATTAAA	-21	NA	125707408	125685537	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125689647_125694166_125694399_125707165
WTC11_00077185	chr6	-	661	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-125702450	True	NA	NA	False	AATAAA	-20	NA	125707406	125701885	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125702306_125707165
WTC11_00077186	chr6	-	667	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	100	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-125702451	True	NA	NA	False	AATAAA	-22	NA	125707407	125701883	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125702309_125707165
WTC11_00077187	chr6	-	2587	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	276.494918578986	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTAAAGTGAATTCA	-127342855	False	NA	1	True	AATAAA	-24	NA	127342875	127288709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
WTC11_00077189	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	276.957758512016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	-127343326	False	NA	-9	True	AATAAA	-14	NA	127343346	127288719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
WTC11_00077191	chr6	-	1449	4	FSM	ENSG00000093144.19	ENST00000528402.5	1449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	287.973378399231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-127343529	False	3761	NA	False	ACTAAA	-3	NA	127343549	127289266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127343335
WTC11_00077193	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.109042706893	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	-127339838	True	NA	-5	True	AATATA	-16	NA	127343599	127289633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
WTC11_00077199	chr6	-	7974	6	FSM	ENSG00000189367.15	ENST00000483725.8	8123	6	19	130	-5	-130	multi-exon	FALSE	canonical	1	2	junction_5	14.6342065039414	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATCCCTGTTGTTAAG	-127459327	True	NA	NA	False	NA	NA	NA	127459370	127438535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127444283_127446407_127447741_127449821_127449902_127449989_127450353_127453846_127454102_127459174
WTC11_00077200	chr6	-	11464	12	FSM	ENSG00000255330.9	ENST00000481848.6	11464	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	15.6263181262196	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATCTGCAGATTTTT	-127518063	True	NA	NA	False	ATTAAA	-18	NA	127519001	127438405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127444283_127446407_127447741_127449821_127449902_127449989_127450353_127453846_127454102_127473079_127473392_127475292_127476469_127482912_127482985_127512890_127513050_127514822_127515048_127515513_127516703_127518578
WTC11_00077206	chr6	-	1855	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	-133	0	133	multi-exon	FALSE	canonical	3	166	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTATTCCGGAGCATAAG	NA	False	NA	NA	False	NA	NA	NA	128520587	128320907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_128322311_128397565_128397689_128520258
WTC11_00077208	chr6	-	1927	1	FSM	ENSG00000219642.2	ENST00000403332.2	1598	1	-332	3	-332	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGGTTAAACCATCGGAG	NA	False	NA	NA	False	NA	NA	NA	129159452	129157525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_129157500_129159500
WTC11_00077213	chr6	-	4200	18	NIC	ENSG00000079819.19	novel	4380	20	NA	NA	0	17	intron_retention	FALSE	canonical	3	100	junction_17	66.9575086041701	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAAAGGGTTAAAAAAACA	-131057479	True	NA	14	True	AATAAA	-36	NA	131063245	130839329	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
WTC11_00077214	chr6	-	4397	20	FSM	ENSG00000079819.19	ENST00000337057.8	4380	20	0	-17	0	17	multi-exon	FALSE	canonical	1	1	junction_7	126.812444664882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAAAGGGTTAAAAAAACA	-131057479	True	NA	14	True	AATAAA	-36	NA	131063245	130839329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130878103_130878251_130880143_130880207_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
WTC11_00077218	chr6	-	4463	30	FSM	ENSG00000112282.18	ENST00000368060.7	4446	30	0	-17	0	0	multi-exon	TRUE	canonical	2	38	junction_1	34.5737764302202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-131626576	True	NA	-4	True	AATAAA	-20	NA	131628229	131586731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131586938_131587708_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
WTC11_00077220	chr6	-	3376	1	FSM	ENSG00000236761.6	ENST00000314099.10	2577	1	-622	-177	-622	177	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTGTAGATAAATGTGAA	NA	False	NA	NA	False	TTTAAA	-45	NA	131711639	131708263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131708300_131711600
WTC11_00077221	chr6	-	2338	5	FSM	ENSG00000118523.6	ENST00000367976.4	2338	5	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_4	44.4915722356493	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTATTCATTTAT	-131942244	True	NA	NA	False	AATAAA	-21	NA	131951372	131948175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131949561_131949948_131950161_131950291_131950544_131950769_131950993_131951106
WTC11_00077222	chr6	-	2987	12	FSM	ENSG00000079931.15	ENST00000367963.8	2989	12	0	2	0	-2	multi-exon	FALSE	canonical	2	13	junction_1	3.27777388678544	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGTGTGGTATTTTA	-132401065	True	NA	-19	True	AATAAA	-14	NA	132401475	132296056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132297318_132297786_132297956_132315634_132315778_132320628_132320689_132322678_132322871_132323930_132324098_132328012_132328116_132328414_132328595_132372607_132372692_132372829_132372998_132374630_132374778_132401162
WTC11_00077225	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	26.6642503836262	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794677	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
WTC11_00077228	chr6	-	2579	12	FSM	ENSG00000118515.12	ENST00000413996.7	2686	12	109	-2	109	0	multi-exon	FALSE	canonical	2	6	junction_11	17.7317010785907	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCATGTGTTATTT	-134175804	False	NA	0	True	AATAAA	-22	NA	134175882	134169247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134175543
WTC11_00077232	chr6	-	633	5	FSM	ENSG00000112339.15	ENST00000529169.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	40.5855577761351	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTTTTTCTGTTGTGAT	-134987719	True	NA	NA	False	ATTAAA	-17	NA	134987745	134982292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644
WTC11_00077233	chr6	-	894	6	FSM	ENSG00000112339.15	ENST00000314674.7	980	6	0	86	0	75	multi-exon	FALSE	canonical	2	3	junction_1	395.487749494216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCCCACCCCCAAGTTT	-135045529	True	NA	NA	False	NA	NA	NA	135054803	135002706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135002843_135037810_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
WTC11_00077235	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	338.35890707945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	-135045610	True	NA	0	True	AATAAA	-22	NA	135054884	135035856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
WTC11_00077238	chr6	-	5170	2	FSM	ENSG00000135541.22	ENST00000679490.1	4619	2	-36	-515	-36	-19	multi-exon	FALSE	canonical	3	39	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTCCAAACAAGTAACA	NA	False	NA	NA	False	NA	NA	NA	135293421	135283476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422
WTC11_00077239	chr6	-	6063	29	FSM	ENSG00000135541.22	ENST00000265602.11	6063	29	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_27	20.2243475715257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTGTTTTATCTTTA	-135495792	True	NA	NA	False	ATTAAA	-18	NA	135497740	135283531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
WTC11_00077241	chr6	-	5465	3	FSM	ENSG00000135541.22	ENST00000681754.1	5938	3	473	0	473	0	multi-exon	FALSE	canonical	3	15	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGCTAATAATTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	135304199	135283985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422_135290526_135300499
WTC11_00077243	chr6	-	3569	22	NIC	ENSG00000135541.22	novel	3638	23	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	15.1142287033461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGAGGCTTTTTTGAT	-135495793	True	NA	-3	True	AATAAA	-11	NA	135497741	135387786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_135388034_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
WTC11_00077244	chr6	-	1586	9	FSM	ENSG00000146410.12	ENST00000367784.6	1586	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	45.1260387692073	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-136249314	True	NA	-2	True	AATAAA	-18	NA	136250292	136231029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136247460_136247561_136249036_136249154_136250263
WTC11_00077245	chr6	-	1793	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	-4	0	0	multi-exon	FALSE	canonical	3	67	junction_7	20.6930926067771	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-136249333	True	NA	-2	True	AATAAA	-18	NA	136250311	136231029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
WTC11_00077246	chr6	-	1518	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	6	0	0	multi-exon	FALSE	canonical	3	46	junction_7	26.1627558930317	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-136249346	True	NA	-2	True	AATAAA	-18	NA	136250324	136231029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
WTC11_00077249	chr6	-	7304	13	FSM	ENSG00000029363.17	ENST00000531224.6	7494	13	0	190	0	46	multi-exon	FALSE	canonical	3	597	junction_2	65.8876885313182	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCAGTCTCATTTG	-136274167	True	NA	40	True	NA	NA	NA	136289846	136256816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
WTC11_00077250	chr6	-	7529	15	FSM	ENSG00000029363.17	ENST00000640069.1	7719	15	0	190	0	46	multi-exon	FALSE	canonical	2	7	junction_7	326.335466559634	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCAGTCTCATTTG	-136274168	True	NA	40	True	NA	NA	NA	136289847	136256816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136270322_136270384_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
WTC11_00077251	chr6	-	7110	12	FSM	ENSG00000029363.17	ENST00000353331.8	7110	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	247.831420976317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAGTGGATTATTTGC	-136274172	True	NA	-6	True	AATAAA	-22	NA	136289851	136256862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
WTC11_00077252	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	174.904885604332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-136274150	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
WTC11_00077253	chr6	-	5647	14	FSM	ENSG00000029363.17	ENST00000527613.5	5640	14	0	-7	0	0	multi-exon	FALSE	canonical	3	34	junction_4	258.214923553156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-136274116	True	NA	-16	True	AATAAA	-17	NA	136289795	136258585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
WTC11_00077255	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	193.004371712145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	-136274116	True	NA	NA	False	NA	NA	NA	136289795	136259690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
WTC11_00077266	chr6	-	292	1	FSM	ENSG00000260418.1	ENST00000564248.1	374	1	68	14	68	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTACAAAGGAATCCTGA	-136335997	False	NA	-13	True	AATAAA	-4	NA	136336019	136335727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136335700_136336000
WTC11_00077267	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	138.617222504998	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	NA	False	NA	NA	False	NA	NA	NA	136550819	136342280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
WTC11_00077268	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_12	63.8090251884616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	-136540034	True	NA	-29	True	AATAAA	-19	NA	136550422	136342733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
WTC11_00077269	chr6	-	5155	30	FSM	ENSG00000197442.10	ENST00000359015.5	5157	30	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_8	2.90065390962939	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTTGATAAATTCTAA	-136792251	False	NA	NA	False	ATTAAA	-15	NA	136792477	136557047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136557819_136558799_136558877_136561532_136561646_136562502_136562616_136567630_136567875_136580300_136580407_136583554_136583741_136592172_136592342_136592436_136592615_136601021_136601043_136601801_136601980_136605208_136605367_136611281_136611388_136613119_136613257_136614158_136614287_136622847_136622982_136637324_136637407_136639542_136639639_136642519_136642570_136650983_136651092_136656306_136656461_136659218_136659379_136669282_136669396_136694139_136694311_136695950_136696058_136697218_136697388_136698488_136698683_136705109_136705134_136720449_136720590_136791709
WTC11_00077272	chr6	-	211	1	FSM	ENSG00000213108.3	ENST00000418879.1	476	1	166	99	166	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAGCACCAAAACCAGA	NA	False	NA	NA	False	NA	NA	NA	137544206	137543995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_137544000_137544200
WTC11_00077282	chr6	-	3162	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	-1	0	1	multi-exon	TRUE	canonical	3	81	junction_8	68.8587216386303	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGAGGGTAGATTGTG	-138985648	True	NA	-14	True	AATAAA	-17	NA	138988261	138904868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
WTC11_00077286	chr6	-	2353	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	29	0	-29	multi-exon	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGGCATTAAATATAAAT	-139371508	True	NA	NA	False	AATACA	-14	NA	139374648	139371835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_139373953_139374412
WTC11_00077287	chr6	-	2612	5	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	10.1827059272082	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAATGACATATTATGT	-142029236	True	NA	NA	False	NA	NA	NA	142030449	141847370	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_141849465_141850131_141850161_141900322_141900411_141909897_141910012_142030162
WTC11_00077288	chr6	-	744	2	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGTCAGCGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	142016810	142016024	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_142016744_142016785
WTC11_00077290	chr6	-	258	3	FSM	ENSG00000010818.10	ENST00000474532.1	258	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGTGATTCTCCCACC	NA	False	NA	NA	False	NA	NA	NA	142837047	142779542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_142779593_142783520_142783616_142836934
WTC11_00077291	chr6	-	5862	3	ISM	ENSG00000189007.16	ENST00000606514.5	6651	6	9413	-54	9413	54	3prime_fragment	FALSE	canonical	3	78	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCACAGGGAGATTATGT	NA	False	NA	41	True	TTTAAA	-44	NA	143432564	143422777	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_143428507_143428611_143428685_143432504
WTC11_00077293	chr6	-	1847	8	NNC	ENSG00000001036.14	novel	2385	7	NA	NA	-98	39452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.032158770265	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	NA	False	NA	NA	False	AATACA	-29	NA	143511818	143455359	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_143455389_143495476_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
WTC11_00077294	chr6	-	3320	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	30	-965	0	965	multi-exon	FALSE	canonical	3	545	junction_3	61.3124964605277	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGCAACCTCAGAATGT	-143506158	True	NA	NA	False	NA	NA	NA	143511690	143493846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
WTC11_00077295	chr6	-	522	2	FSM	ENSG00000001036.14	ENST00000451668.1	737	2	0	215	0	-215	multi-exon	FALSE	canonical	3	721	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGCAAGACCCCTGTC	-143502089	False	NA	NA	False	NA	NA	NA	143502122	143497166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_143497498_143501931
WTC11_00077299	chr6	-	3046	5	FSM	ENSG00000112425.16	ENST00000638554.1	3045	5	0	-1	0	0	multi-exon	TRUE	canonical	3	6	junction_2	7.29297607290741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGTACAGGATTTTT	-145735232	False	210	-20	True	AATAAA	-15	NA	145735276	145625304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145627694_145635244_145635487_145671238_145671400_145686121_145686297_145735197
WTC11_00077304	chr6	-	7348	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	249	-1	-12	1	multi-exon	TRUE	canonical	3	27	junction_29	15.316013240832	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAATTCTTTGATTTCT	-145964066	False	NA	NA	False	AATAAA	-22	NA	145964109	145884805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
WTC11_00077305	chr6	-	6827	31	NIC	ENSG00000146414.17	novel	7201	30	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_29	16.483796757894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-145963336	True	NA	NA	False	AATAAA	-21	NA	145964348	145884806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145964156
WTC11_00077309	chr6	-	2331	14	NNC	ENSG00000131013.4	novel	2475	13	NA	NA	-69	46366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.6831640347295	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAACGAAAAAAAAAAAGAA	-149538841	True	NA	NA	False	NA	NA	NA	149546112	149458128	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_149458155_149504733_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
WTC11_00077310	chr6	-	5698	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	-3223	0	3223	multi-exon	FALSE	canonical	3	315	junction_6	27.147232312378	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCCTTCACCTCTG	-149538772	True	NA	NA	False	NA	NA	NA	149546043	149501271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
WTC11_00077311	chr6	-	1907	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	-9	0	9	multi-exon	FALSE	canonical	3	150	junction_4	17.4802745973855	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGCATTACTAGATTTC	-149645755	True	NA	9	True	AATAAA	-32	NA	149648714	149594863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
WTC11_00077312	chr6	-	1739	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	57.340654140705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
WTC11_00077315	chr6	-	7362	8	FSM	ENSG00000131023.13	ENST00000543571.6	7362	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.2165084516375	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTGTGGAAAGCTAATT	-149713903	True	NA	0	True	AATAAA	-20	NA	149718101	149658152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149662239_149676259_149676367_149676554_149676738_149679874_149680458_149683078_149684593_149695073_149695222_149701778_149702267_149717848
WTC11_00077316	chr6	-	3288	6	FSM	ENSG00000131023.13	ENST00000542747.5	3284	6	0	-4	0	4	multi-exon	FALSE	canonical	3	73	junction_3	14.6342065039414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTACTTGGGAAGCTGA	NA	False	NA	NA	False	AATACA	-37	NA	149701963	149675691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149676367_149676554_149676738_149679874_149680458_149683078_149684593_149695073_149695222_149701778
WTC11_00077317	chr6	-	2565	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	2	0	-2	multi-exon	FALSE	canonical	3	89	junction_1	10.2740233382816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTAGCATTTTATTTTA	-149713907	True	NA	-14	True	AATAAA	-16	NA	149718105	149682920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
WTC11_00077318	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	18.9208879284245	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-149735792	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
WTC11_00077320	chr6	-	3634	7	FSM	ENSG00000120256.11	ENST00000239367.7	3634	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	13.1233464566864	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGAGCTGTTACTGCA	-149863753	True	NA	34	True	AATATA	-18	NA	149864359	149818756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
WTC11_00077323	chr6	-	3227	5	FSM	ENSG00000131019.11	ENST00000367339.7	3111	5	-114	-2	-114	2	multi-exon	FALSE	canonical	3	11	junction_2	2.91547594742265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCATTTCCATCT	-150068861	True	NA	NA	False	ATTAAA	-21	NA	150069235	150061050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_150063352_150064584_150064714_150065397_150065674_150065898_150066163_150068978
WTC11_00077324	chr6	-	3264	3	FSM	ENSG00000181472.5	ENST00000325144.5	3103	3	-161	0	-161	0	multi-exon	FALSE	canonical	3	81	junction_2	8.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-151391699	False	NA	-9	True	AATAAA	-19	NA	151391720	151364114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151366893_151373464_151373650_151391419
WTC11_00077326	chr6	-	1893	13	FSM	ENSG00000155906.20	ENST00000684765.1	1871	13	0	-22	0	0	multi-exon	FALSE	canonical	2	6	junction_3	62.7581336030106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-151448743	True	NA	-47	True	NA	NA	NA	151452146	151404883	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151418532_151418580_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
WTC11_00077327	chr6	-	1397	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	32	-89	0	0	multi-exon	FALSE	canonical	3	28	junction_10	47.5936970616909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATCGTGTGAATAAAAT	-151448723	True	NA	42	True	AAGAAA	-18	NA	151452126	151404794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
WTC11_00077331	chr6	-	3716	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	-18	-2783	0	2783	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTGTTTTTATAGC	-151448689	True	NA	2	True	GATAAA	-23	NA	151452092	151442186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151445826_151452015
WTC11_00077334	chr6	-	2312	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	-91	0	81	multi-exon	FALSE	canonical	3	40	junction_4	125.874937934443	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTTGTGATGGTTTTT	-152982803	True	NA	80	True	NA	NA	NA	152983579	152970437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
WTC11_00077335	chr6	-	2070	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	-16	0	0	multi-exon	FALSE	canonical	3	308	junction_4	9.97496867163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTTTATAAACATTGTA	-152978202	True	NA	-1	True	AATAAA	-32	NA	152983041	152970518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
WTC11_00077336	chr6	-	3145	8	NNC	ENSG00000112031.16	novel	3700	7	NA	NA	0	230	intron_retention	FALSE	canonical	0	0	junction_1	73.5981920807232	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTACCACAACTGGAAG	-152997229	True	NA	NA	False	NA	NA	NA	153002685	152987131	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_152987233_152987993_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
WTC11_00077338	chr6	-	3229	5	FSM	ENSG00000112031.16	ENST00000414771.5	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	68.7277236637443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152989863	False	NA	-107	True	AATAAA	-33	NA	152995319	152987361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995243
WTC11_00077339	chr6	-	3651	7	FSM	ENSG00000112031.16	ENST00000464135.5	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	50.261538199922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
WTC11_00077340	chr6	-	3514	6	FSM	ENSG00000112031.16	ENST00000485512.5	3514	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	74.4166648002986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
WTC11_00077342	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	32.8722273862501	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997253	True	NA	-107	True	AATAAA	-33	NA	153002709	152987361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
WTC11_00077343	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	65.2674497739876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
WTC11_00077346	chr6	-	504	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	-57	0	57	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAAAATGGAA	-153279188	False	NA	6	True	ATTAAA	-32	NA	153282733	153282229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_153282200_153282700
WTC11_00077348	chr6	-	387	1	FSM	ENSG00000218757.1	ENST00000404382.1	547	1	535	-375	535	375	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAAAAGTCCTTATC	NA	False	NA	NA	False	AGTAAA	-17	NA	154845085	154844698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_154844700_154845100
WTC11_00077350	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	34.6217657935968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-155311144	True	NA	-8	True	AATAAA	-20	NA	155314484	155256133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
WTC11_00077351	chr6	-	621	4	FSM	ENSG00000029639.11	ENST00000468889.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	230.988215187606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	-155297058	False	NA	NA	False	AATAAA	-26	NA	155297069	155257652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952
WTC11_00077355	chr6	-	215	1	FSM	ENSG00000271265.1	ENST00000604082.1	446	1	-88	319	-88	-319	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCCTTTTGAATAAGTTT	-156774734	False	NA	NA	False	NA	NA	NA	156774750	156774535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_156774500_156774800
WTC11_00077361	chr6	-	2750	16	FSM	ENSG00000122335.17	ENST00000642244.1	2729	16	0	-21	0	0	multi-exon	FALSE	canonical	1	1	junction_12	23.3964859659641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCAGATTCTCTTTGGC	-158166672	True	NA	NA	False	AGTAAA	-45	NA	158168246	158110598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158150452_158150590_158155314_158155352_158158272_158158365_158168139
WTC11_00077363	chr6	-	1993	14	FSM	ENSG00000122335.17	ENST00000646562.1	1993	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	23.1864069544123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTTTGCTTTTA	-158166656	True	NA	NA	False	NA	NA	NA	158168230	158114534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
WTC11_00077364	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	6.50274667242345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-158166706	True	NA	NA	False	NA	NA	NA	158168280	158114592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
WTC11_00077369	chr6	-	3103	16	NNC	ENSG00000092820.19	novel	3052	14	NA	NA	0	129673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1342.01708218967	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATACAAC	-158799896	True	NA	NA	False	NA	NA	NA	158819368	158636067	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158636098_158682355_158682377_158765747_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
WTC11_00077370	chr6	-	2891	2	FSM	ENSG00000146425.11	ENST00000367088.1	2891	2	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158629997	False	NA	-3	True	AATAAA	-16	NA	158642788	158636473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158637895_158641318
WTC11_00077371	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_4	124.878691136639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631952	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
WTC11_00077373	chr6	-	3066	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_10	943.400155907697	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACGGGTGTGTGCTTGT	-158798755	False	NA	-4	True	AATAAA	-21	NA	158818227	158765742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
WTC11_00077378	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	154.234107771271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	-159693194	False	NA	55	True	TTTAAA	-16	NA	159693234	159679063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
WTC11_00077381	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	238.295801240578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	-159684794	True	NA	NA	False	NA	NA	NA	159693278	159682164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
WTC11_00077383	chr6	-	1901	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	-23	0	0	multi-exon	FALSE	canonical	2	13	junction_10	757.19910855732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTAAACTTGGGTT	-159758610	True	NA	-39	True	ATTAAA	-8	NA	159789703	159778963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
WTC11_00077384	chr6	-	727	3	FSM	ENSG00000120438.12	ENST00000545764.1	709	3	0	-18	0	0	multi-exon	FALSE	canonical	3	2431	junction_2	53.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATTGGAATGTATCC	-159788248	False	NA	NA	False	NA	NA	NA	159788274	159785399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159785497_159785899_159785998_159787742
WTC11_00077392	chr6	-	934	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	8	0	-8	multi-exon	FALSE	canonical	3	74	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTAACAGGCAGACATC	-161270504	True	NA	NA	False	NA	NA	NA	161274032	161165845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_161166418_161232035_161232303_161273937
WTC11_00077393	chr6	-	900	1	FSM	ENSG00000270419.1	ENST00000604200.1	896	1	-8	4	-8	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCAGTTGGCCATCGT	-163413955	False	NA	-7	True	ATTAAA	-18	NA	163413968	163413068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_163413100_163414000
WTC11_00077396	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	59.9615523073081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	-166325760	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
WTC11_00077398	chr6	-	2061	2	FSM	ENSG00000198818.10	ENST00000479490.1	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATGTGTCATTAATA	-166324675	False	NA	-4	True	ATTAAA	-25	NA	166324688	166320027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166320257_166322856
WTC11_00077402	chr6	-	292	2	Antisense	novelGene_ENSG00000233231.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACAGCGTGATGTTT	-166324970	False	NA	-12	True	AATAAA	-16	NA	166341755	166331780	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_166332046_166341728
WTC11_00077403	chr6	-	1046	4	NNC	ENSG00000060762.19	novel	904	5	NA	NA	1310	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	92.1604880388312	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	NA	False	NA	-35	True	AATAAA	-21	NA	166369025	166364918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_166365454_166365973_166366107_166366794_166366892_166368744
WTC11_00077405	chr6	-	956	4	NIC	ENSG00000060762.19	novel	977	5	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	93.5746879354787	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380007	True	NA	-35	True	AATAAA	-21	NA	166382996	166364918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_166365454_166365973_166366107_166366794_166366892_166382805
WTC11_00077407	chr6	-	5997	23	FSM	ENSG00000071242.12	ENST00000510118.5	5992	23	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_20	36.4788232465707	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAGCCTAACAATAAC	-166862341	True	NA	-17	True	AATAAA	-24	NA	166862511	166409382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166770862_166770914_166858199_166858260_166862107
WTC11_00077410	chr6	-	8402	9	FSM	ENSG00000026297.17	ENST00000508775.6	8614	9	0	212	0	-212	multi-exon	FALSE	canonical	0	0	junction_6	123.617100354279	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAAACACCAACGAAACAG	-166953261	True	NA	NA	False	NA	NA	NA	166956550	166922324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096
WTC11_00077413	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	90.4377111156443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-166953312	True	NA	NA	False	NA	NA	NA	166956601	166928487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
WTC11_00077415	chr6	-	1729	6	NIC	ENSG00000026297.17	novel	1961	7	NA	NA	0	-150	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	152.65385681338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTAAGACAACCTGTT	-166953111	False	NA	NA	False	GGGGCT	-23	NA	166956400	166928672	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166956096
WTC11_00077420	chr6	-	375	2	NNC	ENSG00000227598.1	novel	385	3	NA	NA	-50	-25331	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCACACCAGAGGAATTAA	-166998218	True	NA	NA	False	AAAAAG	-43	NA	166999115	166994956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_166995134_166998917
WTC11_00077427	chr6	-	1306	10	FSM	ENSG00000184465.16	ENST00000479310.5	1289	10	0	-17	0	17	multi-exon	FALSE	canonical	2	10	junction_1	9.54262691270395	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTAGTCGGCCCATGG	-169649222	False	NA	15	True	AATAAA	-31	NA	169649233	169457194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169457635_169582835_169582935_169602218_169602322_169613558_169613657_169632946_169633069_169634427_169634526_169638538_169638661_169643696_169643787_169647772_169647871_169649197
WTC11_00077428	chr6	-	681	7	FSM	ENSG00000184465.16	ENST00000441385.2	683	7	0	2	0	-2	multi-exon	FALSE	canonical	3	31	junction_1	75.0088883622023	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCATGGCATGGTTTG	-169660653	False	39	-1	True	AATATA	-24	NA	169660692	169647649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169647871_169649197_169649276_169651929_169652009_169658275_169658359_169659085_169659208_169659450_169659519_169660662
WTC11_00077429	chr6	-	8011	14	NIC	ENSG00000184465.16	novel	4654	16	NA	NA	0	371	intron_retention	FALSE	canonical	3	20	junction_8	52.9301202826528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCGTCCTCAGACATGG	-169697035	True	NA	NA	False	NA	NA	NA	169702037	169657387	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169663562_169663879_169664165_169664633_169664769_169665557_169666416_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
WTC11_00077432	chr6	-	686	2	ISM	ENSG00000184465.16	ENST00000648472.1	3260	22	42477	200551	1148	-5	internal_fragment	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACAATATTTCCTATTG	-169659531	False	NA	-12	True	AATAAA	-15	NA	169659544	169657766	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_169658359_169659450
WTC11_00077436	chr6	-	2991	6	FSM	ENSG00000184465.16	ENST00000650296.1	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.3648509520769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGGGCCTTTCTGTTTT	-169697035	True	NA	NA	False	ATTAAA	-12	NA	169702037	169666917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169668777_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
WTC11_00077439	chr6	-	1592	12	FSM	ENSG00000130024.15	ENST00000366780.8	1589	12	0	-3	0	0	multi-exon	FALSE	canonical	3	48	junction_9	40.0840027034137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAAAATCTGCAGTT	-169723916	False	NA	-8	True	AATAAA	-20	NA	169723931	169703901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
WTC11_00077440	chr6	-	4395	9	FSM	ENSG00000130024.15	ENST00000612128.1	4395	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_6	12.9807549857472	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	-169723990	False	1106	0	True	AATAAA	-23	NA	169724005	169707027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717907_169718787_169718919_169721004_169721112_169723844
WTC11_00077443	chr6	-	3785	11	FSM	ENSG00000198719.9	ENST00000366756.4	3779	11	0	-6	0	6	multi-exon	FALSE	canonical	3	34	junction_5	6.50845603810919	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTTACTTGGCTTTG	NA	False	NA	2	True	AATAAA	-22	NA	170291078	170282199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170282880_170282987_170283106_170283230_170284030_170284918_170285136_170285253_170285424_170285568_170285700_170286237_170286299_170288238_170288497_170288728_170288790_170289511_170289809_170290085
WTC11_00077445	chr6	-	1939	5	FSM	ENSG00000008018.9	ENST00000462957.1	1939	5	0	0	0	0	multi-exon	TRUE	canonical	3	4256	junction_4	271.228109715789	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGCTCTTATCAC	-170524278	False	NA	-57	True	NA	NA	NA	170550441	170535221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005
WTC11_00077448	chr6	-	1086	6	FSM	ENSG00000071994.11	ENST00000542896.5	1082	6	0	-4	0	4	multi-exon	FALSE	canonical	3	130	junction_1	211.748341197753	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCTTTACTGTTTAAT	-170565481	True	NA	2	True	ATTAAA	-25	NA	170584612	170578477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
WTC11_00077449	chr6	-	710	6	FSM	ENSG00000071994.11	ENST00000544866.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	269.554150403959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTCTTTGACTATATA	-170584376	False	NA	-27	True	TTTAAA	-32	NA	170584389	170578506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
WTC11_00077450	chr6	-	2657	3	FSM	ENSG00000071994.11	ENST00000453163.6	2657	3	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_2	30.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGAGGTAGCTGT	-170565481	True	NA	NA	False	AATAAA	-21	NA	170584612	170581088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170583189_170583504_170583748_170584298
WTC11_00077451	chr6	-	1290	4	FSM	ENSG00000071994.11	ENST00000614056.4	1287	4	0	-3	0	0	multi-exon	FALSE	canonical	3	174	junction_1	248.502626858461	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	-170565561	True	NA	-17	True	AATAAA	-16	NA	170584692	170581744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298
WTC11_00077455	chr6	+	275	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTTGTGGTAAGGGGT	NA	False	NA	NA	False	NA	NA	NA	6028135	6028410	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_6028100_6028400
WTC11_00077456	chr6	+	277	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTAAAATAGTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	11145122	11145399	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_11145100_11145400
WTC11_00077457	chr6	+	319	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAATTAGATGTCCTAGG	NA	False	NA	NA	False	AATAAA	-43	NA	12671982	12672301	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_12672000_12672300
WTC11_00077458	chr6	+	217	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTAACTTGTAAAGCT	14299297	False	NA	NA	False	AAAACA	-23	NA	14299336	14299553	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14299300_14299600
WTC11_00077459	chr6	+	206	1	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGACACGTTTTATCCA	NA	False	NA	NA	False	NA	NA	NA	19539512	19539718	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_19539500_19539700
WTC11_00077460	chr6	+	222	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTTGGGTTTTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	20801011	20801233	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_20801000_20801200
WTC11_00077462	chr6	+	880	1	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCCACTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	21686392	21687272	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21686400_21687300
WTC11_00077463	chr6	+	472	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATACAACTTTTCCCTTT	21750767	False	NA	NA	False	NA	NA	NA	21750783	21751255	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21750800_21751300
WTC11_00077464	chr6	+	271	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCCACTAATTCCAATT	26173027	False	NA	NA	False	NA	NA	NA	26173049	26173320	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26173000_26173300
WTC11_00077465	chr6	+	300	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCTAGTTCTTAAACT	26180243	False	NA	NA	False	NA	NA	NA	26180265	26180565	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26180300_26180600
WTC11_00077466	chr6	+	309	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGTGCTTTCAAAGTAT	26189424	False	NA	NA	False	NA	NA	NA	26189445	26189754	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26189400_26189800
WTC11_00077467	chr6	+	318	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTGCAGTGATTCCAA	NA	False	NA	NA	False	AATAAA	-30	NA	26500632	26500950	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26500600_26501000
WTC11_00077468	chr6	+	302	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCAGTCTATGAATTC	NA	False	NA	NA	False	NA	NA	NA	26534195	26534497	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26534200_26534500
WTC11_00077469	chr6	+	246	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCACCGCGCCCGGGGG	NA	False	NA	NA	False	NA	NA	NA	26565917	26566163	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26565900_26566200
WTC11_00077470	chr6	+	314	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTAGTGAATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	26625252	26625566	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26625300_26625600
WTC11_00077471	chr6	+	240	1	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACAGTTGTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	27237408	27237648	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27237400_27237600
WTC11_00077472	chr6	+	314	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGGAAGCAACCAGTGGA	NA	False	NA	NA	False	NA	NA	NA	27335441	27335755	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27335400_27335800
WTC11_00077473	chr6	+	276	1	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCAGCTTTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	27561081	27561357	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27561100_27561400
WTC11_00077474	chr6	+	379	1	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCTGTTGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	27592516	27592895	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27592500_27592900
WTC11_00077475	chr6	+	320	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACATCAGACCCTGGA	NA	False	NA	NA	False	AAAAAG	-15	NA	27594427	27594747	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27594400_27594700
WTC11_00077476	chr6	+	311	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTTTACTCAACACG	NA	False	NA	NA	False	AATAAA	-10	NA	27604164	27604475	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27604200_27604500
WTC11_00077477	chr6	+	314	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACTATTCTGTCTACC	NA	False	NA	NA	False	NA	NA	NA	27693522	27693836	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27693500_27693800
WTC11_00077478	chr6	+	315	1	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAGCTAGAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	27884181	27884496	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27884200_27884500
WTC11_00077479	chr6	+	1290	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCATTAAAGTTTGGTG	27894133	False	NA	NA	False	NA	NA	NA	27894145	27895435	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27894100_27895400
WTC11_00077480	chr6	+	294	1	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTACAGCTGGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	28475627	28475921	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28475600_28475900
WTC11_00077482	chr6	+	304	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAATGTTTATCCAGTT	NA	False	NA	NA	False	NA	NA	NA	28898108	28898412	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28898100_28898400
WTC11_00077485	chr6	+	1461	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACGGTTATAAAACATTT	NA	False	NA	80	True	NA	NA	NA	30927226	30928687	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_30927200_30928700
WTC11_00077487	chr6	+	366	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGCCTTCTCCCGCCCC	37137433	False	NA	NA	False	NA	NA	NA	37137448	37137814	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_37137400_37137800
WTC11_00077489	chr6	+	263	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGGTTTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	45999786	46000049	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_45999800_4.6e+07
WTC11_00077490	chr6	+	893	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTGAGTCACTTTGAA	NA	False	NA	NA	False	ATTAAA	-27	NA	54209670	54210563	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_54209700_54210600
WTC11_00077491	chr6	+	304	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAACAGTCTTAAATCA	NA	False	NA	NA	False	NA	NA	NA	56376985	56377289	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_56377000_56377300
WTC11_00077492	chr6	+	3374	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGTTTTCTAACTT	NA	False	NA	NA	False	AATAAA	-29	NA	56822152	56825526	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_56822200_56825500
WTC11_00077494	chr6	+	275	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68101363	68101638	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_68101400_68101600
WTC11_00077496	chr6	+	260	1	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAACTCATCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	78587842	78588102	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_78587800_78588100
WTC11_00077497	chr6	+	5261	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACGATCCTATAAATCCT	85596793	False	NA	NA	False	NA	NA	NA	85596833	85602094	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_85596800_85602100
WTC11_00077499	chr6	+	821	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATCAGCTGTGATGGC	NA	False	NA	NA	False	NA	NA	NA	90670269	90671090	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90670300_90671100
WTC11_00077500	chr6	+	256	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTGAGTAAAGCTAATT	90671435	False	NA	NA	False	NA	NA	NA	90671451	90671707	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90671500_90671700
WTC11_00077503	chr6	+	324	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCTCTTCAAATTC	NA	False	NA	NA	False	AATAAA	-34	NA	100035575	100035899	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_100035600_100035900
WTC11_00077504	chr6	+	213	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTTCAGTCAAGCCCAA	NA	False	NA	NA	False	NA	NA	NA	102105123	102105336	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_102105100_102105300
WTC11_00077505	chr6	+	235	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTCCACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	106676724	106676959	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_106676700_106677000
WTC11_00077506	chr6	+	596	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAATATAACCTATTAC	NA	False	NA	NA	False	NA	NA	NA	109479346	109479942	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_109479300_109479900
WTC11_00077510	chr6	+	424	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGGAACTGCCATCAA	NA	False	NA	NA	False	NA	NA	NA	120463586	120464010	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_120463600_120464000
WTC11_00077511	chr6	+	886	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1039	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATAGCATAACCTGC	121621209	False	NA	NA	False	NA	NA	NA	121621237	121622123	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_121621200_121622100
WTC11_00077513	chr6	+	678	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAACTTTTATACCTGTT	NA	False	NA	NA	False	NA	NA	NA	122844117	122844795	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122844100_122844800
WTC11_00077514	chr6	+	248	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCCCCACTCCTGCCCGC	NA	False	NA	NA	False	AAAACA	-19	NA	122845114	122845362	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122845100_122845400
WTC11_00077517	chr6	+	207	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGATTTTTACATCTTGG	NA	False	NA	NA	False	AAAACA	-40	NA	129157314	129157521	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_129157300_129157500
WTC11_00077520	chr6	+	233	1	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTTTTAGCCTAGAT	NA	False	NA	NA	False	TATAAA	-30	NA	142063191	142063424	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_142063200_142063400
WTC11_00077522	chr6	+	3122	1	Antisense	novelGene_ENSG00000289045.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCTCTACTAAAAATACAA	NA	False	NA	NA	False	NA	NA	NA	149497714	149500836	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_149497700_149500800
WTC11_00077523	chr6	+	227	1	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTTCAATATTAACAAT	NA	False	NA	NA	False	ATTAAA	-31	NA	150828402	150828629	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_150828400_150828600
WTC11_00077527	chr6	+	274	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAACCATTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	157235340	157235614	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_157235300_157235600
WTC11_00077528	chr6	+	292	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	753	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCATTTCCTTAGT	NA	False	NA	NA	False	NA	NA	NA	165831492	165831784	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_165831500_165831800
WTC11_00077534	chr6	+	3450	3	FSM	ENSG00000250903.10	ENST00000530833.6	2988	3	-10	-452	3	452	multi-exon	FALSE	canonical	1	3	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATCAAAAAAAAAAAAAAA	2245401	True	NA	NA	False	AAAAAG	-18	NA	2245770	2266800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2263600
WTC11_00077535	chr6	+	2092	6	FSM	ENSG00000250903.10	ENST00000664738.1	2127	6	35	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	7.64198926981712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTATACTGCTGATT	2245401	True	NA	-34	True	GATAAA	-37	NA	2245770	2413548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2397220_2397627_2398576_2398779_2398865_2399038_2412486
WTC11_00077537	chr6	+	300	3	NNC	ENSG00000244041.7	novel	777	2	NA	NA	0	3229	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCAGGTATTCCTT	2988239	True	NA	NA	False	AATAAA	-21	NA	2988657	2994402	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_2988710_2993930_2994054_2994277
WTC11_00077538	chr6	+	2686	1	Genic_Genomic	ENSG00000288612.1	novel	NA	NA	NA	NA	2701	1432	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCATAGAGTTTGGATT	3026160	False	NA	NA	False	AATAAA	-5	NA	3026172	3028858	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_3026200_3028900
WTC11_00077539	chr6	+	1856	9	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	20.4939015319192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGGTCTTCGATAGT	3062550	True	NA	NA	False	AATACA	-35	NA	3063839	3106051	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481
WTC11_00077540	chr6	+	1481	8	FSM	ENSG00000137275.16	ENST00000479389.1	1481	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.607455407639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGGTCTTCGATAGT	3062701	False	NA	NA	False	AATACA	-35	NA	3063990	3106051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3064060_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481
WTC11_00077541	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	3250079	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3267590
WTC11_00077543	chr6	+	1648	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	3849124	True	NA	8	True	AATAAA	-18	NA	3849367	3851317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3849487_3849788
WTC11_00077544	chr6	+	4886	19	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	8	-1	intron_retention	FALSE	canonical	3	9	junction_12	125.411126369569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTGTCTCCTGGTTTTT	4010685	True	NA	4	True	AATAAA	-17	NA	4021307	4064981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4056526_4056689_4057035_4057188_4058727_4058815_4060412_4060687_4061014_4062300_4063073_4063120_4064800
WTC11_00077545	chr6	+	3784	21	NIC	ENSG00000112739.17	novel	2364	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	109.702267524423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010685	True	NA	6	True	AATAAA	-19	NA	4021307	4064983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4060687_4061014_4061148_4061654_4061701_4062212_4062300_4062556_4062634_4063073_4063120_4064800
WTC11_00077547	chr6	+	1268	3	FSM	ENSG00000272142.4	ENST00000663198.1	1278	3	10	0	10	0	multi-exon	FALSE	canonical	1	1	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGCATACACCAAACAT	5003559	True	NA	NA	False	TATAAA	-23	NA	5003787	5043590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5003960_5021380_5021474_5042587
WTC11_00077548	chr6	+	1722	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	10	0	10	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	5003559	True	NA	NA	False	AAAAAG	-14	NA	5003787	5043962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5003960_5021380_5021474_5042505
WTC11_00077549	chr6	+	3821	1	FSM	ENSG00000219607.4	ENST00000405617.4	4147	1	-48	374	-48	-374	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTTTAAAAATGGTCAA	5085277	False	NA	NA	False	NA	NA	NA	5085292	5089113	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5085300_5089100
WTC11_00077550	chr6	+	8556	13	NNC	ENSG00000124782.21	novel	5826	12	NA	NA	-55531	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7304124416279	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTCACGTGGCCGTC	7052009	False	NA	14	True	AATAAA	-24	NA	7052065	7251982	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_7052095_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7240437_7240603_7246423_7247222_7248510
WTC11_00077552	chr6	+	3830	7	FSM	ENSG00000153162.9	ENST00000283147.7	3784	7	-46	0	-46	0	multi-exon	FALSE	canonical	0	0	junction_1	3.19722101554181	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGTCGAGATGCTGC	7725945	True	NA	NA	False	AATAAA	-17	NA	7726052	7881728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7727620_7845139_7845333_7861450_7861600_7862300_7862499_7879073_7879151_7879990_7880102_7880193
WTC11_00077553	chr6	+	1119	5	FSM	ENSG00000285219.3	ENST00000644441.1	1226	5	107	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_2	0.866025403784439	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGTAATAATTTATTG	8435526	True	NA	NA	False	AATAAA	-24	NA	8435684	8785443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_8436179_8437939_8438032_8558584_8558644_8784190_8784338_8785116
WTC11_00077554	chr6	+	307	1	FSM	ENSG00000205318.5	ENST00000379591.4	934	1	564	63	564	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGATACCTACAGTCC	10634314	False	NA	NA	False	AATAAA	-25	NA	10634325	10634632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10634300_10634600
WTC11_00077558	chr6	+	512	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	-10	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	440.504540271721	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	10738110	True	NA	-33	True	NA	NA	NA	10747800	10829165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
WTC11_00077560	chr6	+	9042	9	FSM	ENSG00000095951.17	ENST00000379388.7	9053	9	11	0	11	0	multi-exon	FALSE	canonical	1	2	junction_1	9.34662372196506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	12012130	False	NA	7	True	AGTAAA	-20	NA	12012322	12164999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12012567_12015525_12015669_12089183_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
WTC11_00077563	chr6	+	4382	9	FSM	ENSG00000124523.17	ENST00000680442.1	4382	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	61.8405206963848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	13574484	False	NA	NA	False	NA	NA	NA	13574528	13615158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
WTC11_00077565	chr6	+	4485	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-21	-52	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCCCATTGCCAGCCGC	13574463	False	NA	NA	False	NA	NA	NA	13574507	13615106	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
WTC11_00077568	chr6	+	3240	2	FSM	ENSG00000180537.13	ENST00000420478.2	826	2	-14	-2400	-14	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTTTGATTTCTCTG	13924262	True	NA	6	True	ATTAAA	-19	NA	13924881	13980006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925024_13976908
WTC11_00077570	chr6	+	1421	1	FSM	ENSG00000272341.1	ENST00000606924.1	2538	1	-778	1895	-778	-1895	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGTTTTAGGCTTGAA	16763498	False	NA	NA	False	AATAAA	-16	NA	16763567	16764988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16763600_16765000
WTC11_00077572	chr6	+	4262	2	NIC	ENSG00000172201.12	novel	3873	3	NA	NA	0	1	intron_retention	FALSE	canonical	3	91	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGAGTTTGTGGTTTT	19835840	True	NA	7	True	AATAAA	-18	NA	19837369	19842198	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_19838643_19839209
WTC11_00077573	chr6	+	1119	1	Genic_Genomic	ENSG00000145996.11	novel	NA	NA	NA	NA	12218	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAAGATGCCTAGTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	20558558	20559677	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_20558600_20559700
WTC11_00077574	chr6	+	290	2	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATATTCACTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	21361533	21367148	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21361701_21367025
WTC11_00077575	chr6	+	256	1	FSM	ENSG00000220771.2	ENST00000404566.2	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTGGGACCTGCACAG	21602116	False	NA	NA	False	NA	NA	NA	21602127	21602383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21602100_21602400
WTC11_00077577	chr6	+	2263	1	FSM	ENSG00000222515.1	ENST00000410583.1	375	1	-1371	-517	-1371	517	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAGAAAGTGATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	22084172	22086435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_22084200_22086400
WTC11_00077578	chr6	+	4461	1	FSM	ENSG00000272168.9	ENST00000605917.1	4461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAATTTCTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	22147207	22151668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_22147200_22151700
WTC11_00077579	chr6	+	1134	1	FSM	ENSG00000146049.2	ENST00000274766.2	1383	1	99	150	99	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACAAATATGG	NA	False	NA	NA	False	NA	NA	NA	24357001	24358135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24357000_24358100
WTC11_00077580	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	665.740690259103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	24666904	False	NA	NA	False	AATAAA	-36	NA	24667034	24705065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
WTC11_00077581	chr6	+	580	4	FSM	ENSG00000112312.10	ENST00000476555.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	581.865963947025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTGTCCCAGAATCTA	24775073	True	NA	NA	False	NA	NA	NA	24775466	24781544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24775825_24777221_24777298_24780662_24780741_24781476
WTC11_00077584	chr6	+	993	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	14	-499	14	499	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCCACCCTCATCTC	26020438	False	NA	NA	False	AATAAA	-19	NA	26020464	26021457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26020500_26021500
WTC11_00077585	chr6	+	400	1	FSM	ENSG00000278637.2	ENST00000617569.2	402	1	34	-32	34	32	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGCTCAATGTGTAAT	26015903	False	NA	NA	False	ACTAAA	-27	NA	26021682	26022082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26021700_26022100
WTC11_00077587	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	25998487	True	NA	25	True	AAAACA	-40	NA	26103932	26104337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26103900_26104300
WTC11_00077588	chr6	+	1642	3	NNC	ENSG00000180573.10	novel	1462	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	26049706	True	NA	-17	True	AATAGA	-32	NA	26124202	26139084	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_26124750_26127697_26127762_26138053
WTC11_00077589	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	26049706	True	NA	-17	True	AATAGA	-32	NA	26124202	26139084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26124634_26138053
WTC11_00077590	chr6	+	778	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCACCGCTCTCAGTAAA	26123072	True	NA	6	True	NA	NA	NA	26156331	26157109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26156300_26157100
WTC11_00077593	chr6	+	437	1	FSM	ENSG00000217275.2	ENST00000405418.2	499	1	62	0	62	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGAGGATTGTTTTGC	26202169	False	NA	NA	False	AGTAAA	-1	NA	26202217	26202654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26202200_26202700
WTC11_00077594	chr6	+	550	1	FSM	ENSG00000277720.1	ENST00000611953.1	196	1	38	-392	38	392	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATGTCTATGAAGCCC	26218714	False	NA	NA	False	AATAAA	-39	NA	26219082	26219632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26219100_26219600
WTC11_00077595	chr6	+	3774	11	FSM	ENSG00000186470.14	ENST00000377708.7	3776	11	2	0	2	0	multi-exon	TRUE	canonical	2	3	junction_7	2.23830292855994	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	26365131	True	NA	7	True	AATAAA	-18	NA	26365199	26378312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26365353_26367989_26368051_26368177_26368268_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
WTC11_00077596	chr6	+	3684	10	FSM	ENSG00000186470.14	ENST00000508906.6	3733	10	41	8	2	0	multi-exon	FALSE	canonical	2	3	junction_6	2.34652356466032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	26365131	True	NA	7	True	AATAAA	-18	NA	26365199	26378312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26365353_26367989_26368051_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
WTC11_00077597	chr6	+	2781	8	NIC	ENSG00000124508.17	novel	2733	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13.7261853136735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAACAAAAAGTG	26381862	True	NA	-11	True	AAAAAG	-16	NA	26383122	26393969	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
WTC11_00077598	chr6	+	3247	9	ISM	ENSG00000026950.17	ENST00000289361.11	3388	10	3101	-1	3068	1	3prime_fragment	FALSE	canonical	2	7	junction_2	2.14694550466471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAACTTGGCTTTTTCT	26405265	False	NA	10	True	AATAAA	-19	NA	26405375	26415209	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26413168
WTC11_00077600	chr6	+	4557	15	Fusion	ENSG00000124549.15_ENSG00000111801.16	novel	1238	7	NA	NA	4	-3	intron_retention	TRUE	canonical	2	3	junction_4	1.8070158058105	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCCTCAGCTTGGCTT	26421275	True	NA	2	True	AATAAA	-14	NA	26421396	26453411	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_26421625_26422088_26422198_26422932_26423760_26426241_26426524_26427870_26428108_26428642_26428786_26443381_26443443_26443956_26444305_26445703_26445986_26448247_26448449_26448616_26448638_26448727_26448755_26449661_26449689_26450106_26450134_26451674
WTC11_00077601	chr6	+	533	3	FSM	ENSG00000124549.15	ENST00000463944.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCACTAAAGGAACTGG	26423690	False	NA	NA	False	AAAAAG	-42	NA	26423729	26428031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26423760_26426181_26426524_26427870
WTC11_00077602	chr6	+	1238	7	FSM	ENSG00000111801.16	ENST00000483179.5	1238	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	1.37436854187255	2952	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGAGCCCACTGCCC	NA	False	NA	NA	False	NA	NA	NA	26445537	26452161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26445986_26448247_26448449_26448616_26448638_26448727_26448755_26449661_26449689_26450106_26450134_26451674
WTC11_00077603	chr6	+	687	4	FSM	ENSG00000112763.17	ENST00000480218.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	18.7320284243028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	26464478	False	NA	7	True	AATAAA	-15	NA	26465226	26476619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26465407_26465952_26465974_26466061_26466089_26476160
WTC11_00077605	chr6	+	371	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	86	0	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCTAAGAAGACTGAGAG	27089800	True	NA	NA	False	NA	NA	NA	27147105	27147476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27147100_27147500
WTC11_00077606	chr6	+	1097	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3494	1106	1	0	3prime_fragment	FALSE	canonical	3	33	junction_1	26.7850704684531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	27250550	True	NA	-9	True	NA	NA	NA	27251194	27255514	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
WTC11_00077608	chr6	+	2006	4	ISM	ENSG00000112812.16	ENST00000481125.5	910	5	328	-939	-58	0	3prime_fragment	FALSE	canonical	3	22	junction_2	31.5911379978626	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	27251497	False	NA	19	True	AATAAA	-16	NA	27251529	27256453	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_27252041_27252807_27252950_27254985_27255132_27255246
WTC11_00077609	chr6	+	4063	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	-21	0	-21	0	multi-exon	FALSE	canonical	2	19	junction_1	17	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	27388685	False	NA	18	True	AATAAA	-29	NA	27388737	27403908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27389076_27399441_27399551_27400292
WTC11_00077610	chr6	+	900	4	FSM	ENSG00000281706.4	ENST00000628328.3	1352	4	-13	465	-5	-465	multi-exon	FALSE	canonical	2	4	junction_2	3.09120616516523	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCCTGGATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	27694021	27710889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27694507_27702313_27702418_27710123_27710226_27710680
WTC11_00077611	chr6	+	660	2	FSM	ENSG00000281706.4	ENST00000625477.1	834	2	7	167	1	-167	multi-exon	FALSE	canonical	3	11	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAAACTCTTGAGGCT	27693831	True	NA	NA	False	NA	NA	NA	27694079	27702546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27694507_27702313
WTC11_00077613	chr6	+	419	1	FSM	ENSG00000219891.3	ENST00000406489.2	419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1873	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTAAAAGGCACATGAACA	NA	False	NA	NA	False	NA	NA	NA	28092426	28092845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28092400_28092800
WTC11_00077615	chr6	+	584	1	FSM	ENSG00000216901.1	ENST00000405613.1	487	1	16	-113	16	113	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAAAGACCATTAAA	NA	False	NA	NA	False	NA	NA	NA	28176203	28176787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28176200_28176800
WTC11_00077616	chr6	+	1617	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	-16	0	1	0	multi-exon	FALSE	canonical	3	12	junction_1	8.33999733546454	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	28224540	True	NA	24	True	AATAAA	-25	NA	28225275	28233482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
WTC11_00077617	chr6	+	1468	1	FSM	ENSG00000189134.4	ENST00000343684.4	1662	1	139	55	139	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATGTTGCAGCATAAA	28259401	False	NA	NA	False	AATATA	-20	NA	28259435	28260903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28259400_28260900
WTC11_00077619	chr6	+	4591	6	NNC	ENSG00000189298.14	novel	4799	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	13.145341380124	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGTGGATTCTTAAA	28349194	True	NA	5	True	AATAAA	-15	NA	28349937	28369170	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_28349965_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
WTC11_00077620	chr6	+	329	2	FSM	ENSG00000224157.1	ENST00000444986.1	413	2	75	9	75	-9	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTCAACCGTCTTAACT	NA	False	NA	NA	False	AATAAA	-7	NA	28896604	28897313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28896731_28897110
WTC11_00077622	chr6	+	257	1	ISM	ENSG00000206341.7	ENST00000383620.4	1096	7	1596	878	1596	-878	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGGGAGATGGGGGT	NA	False	NA	NA	False	NA	NA	NA	29889347	29889604	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_29889300_29889600
WTC11_00077623	chr6	+	2288	6	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-43	593	intron_retention	FALSE	canonical	0	0	junction_1	21.4886016297013	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGAGTCCACATGTT	NA	False	NA	5	True	AATAAA	-16	NA	29926415	29929825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_29926531_29926771_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
WTC11_00077624	chr6	+	1786	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	-20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.803883314082	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	29942301	True	NA	27	True	AATAAA	-30	NA	29942531	29945884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
WTC11_00077625	chr6	+	760	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	-6	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	143.49455564585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059839	True	NA	38	True	ATTAAA	-28	NA	30061256	30064909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
WTC11_00077627	chr6	+	3468	8	NIC	ENSG00000204599.15	novel	3624	8	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.1442687471376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	NA	False	NA	23	True	NA	NA	NA	30326516	30343729	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30326888_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
WTC11_00077628	chr6	+	3387	8	ISM	ENSG00000204599.15	ENST00000396548.5	3198	9	457	10	118	-9	3prime_fragment	FALSE	canonical	3	20	junction_1	29.7931645358667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGTGATCTCTGTGTT	30326976	False	NA	13	True	NA	NA	NA	30327376	30343719	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30327697_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
WTC11_00077629	chr6	+	1698	11	FSM	ENSG00000248167.7	ENST00000623385.3	1698	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	502.683240221912	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	30328506	False	NA	18	True	AATAAA	-19	NA	30328906	30346854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711_30341897_30345297_30345399_30345490_30345574_30346431_30346558_30346712
WTC11_00077630	chr6	+	670	3	NIC	ENSG00000241370.6	novel	621	4	NA	NA	2	-4	intron_retention	FALSE	canonical	3	1120	junction_2	43.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGATTCTGTTCTGTGG	30336951	True	NA	17	True	AATAAA	-18	NA	30345170	30346853	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30345574_30346431_30346558_30346712
WTC11_00077631	chr6	+	281	1	FSM	ENSG00000224936.1	ENST00000425839.1	1370	1	64	1025	64	-1025	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTCTCTCCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	30468945	30469226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30468900_30469200
WTC11_00077633	chr6	+	1490	10	NIC	ENSG00000137343.18	novel	1527	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_8	67.5208244054756	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626862	True	NA	13	True	AATAAA	-21	NA	30626885	30646821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30645894_30645975_30646066
WTC11_00077634	chr6	+	1572	5	ISM	ENSG00000204564.12	ENST00000446773.6	1496	6	7	1	7	-1	intron_retention	FALSE	canonical	3	39	junction_1	31.1367949538805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACATATCACTTTCTC	NA	False	NA	25	True	AATAAA	-25	NA	30647427	30653108	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647
WTC11_00077635	chr6	+	4651	18	NIC	ENSG00000204580.14	novel	2882	17	NA	NA	0	817	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	171.263773976917	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATGAGCATAAGCCATA	30880770	True	NA	9	True	AATAAA	-17	NA	30882975	30900973	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00077639	chr6	+	3851	16	FSM	ENSG00000204580.14	ENST00000376567.6	3832	16	-19	0	-19	0	multi-exon	FALSE	canonical	3	342	junction_10	88.1270799596936	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30888130	False	NA	20	True	AATAAA	-18	NA	30888369	30900156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00077641	chr6	+	4484	38	NIC	ENSG00000288473.1	novel	6054	41	NA	NA	-71	-2954	combination_of_known_splicesites	TRUE	canonical	3	21	junction_1	60.6314592396159	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGCTGGGGGAGG	30908155	False	NA	NA	False	NA	NA	NA	30908170	30923505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810_30914345_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352
WTC11_00077642	chr6	+	3577	30	NIC	ENSG00000137411.19	novel	3575	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_5	22.5257152561298	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	30912686	True	NA	8	True	GATAAA	-14	NA	30914237	30926456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30914345_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00077643	chr6	+	3550	30	NIC	ENSG00000137411.19	novel	3575	30	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	35.1474894785794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATGTCTGTTTATGGC	30912706	True	NA	7	True	GATAAA	-13	NA	30914257	30926455	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30914345_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920094_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00077645	chr6	+	2596	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	-47	6599	-47	-79	multi-exon	FALSE	canonical	1	3	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTATATCCACTTTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	31463122	31465809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31463280_31463370
WTC11_00077646	chr6	+	691	6	FSM	ENSG00000204472.13	ENST00000337917.11	607	6	-90	6	-80	0	multi-exon	FALSE	canonical	3	8	junction_1	37.5957444400294	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	NA	False	NA	15	True	AATAAA	-16	NA	31615136	31617015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31615294_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
WTC11_00077647	chr6	+	6862	31	NNC	ENSG00000204469.13	novel	6861	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	216.06759487613	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	31580824	True	NA	29	True	AATAAA	-19	NA	31620715	31637771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626984_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
WTC11_00077649	chr6	+	461	5	NIC	ENSG00000204444.11	novel	709	6	NA	NA	93	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	9.75640815054393	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31652495	False	NA	9	True	AATAAA	-20	NA	31652509	31658210	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_31652552_31657224_31657299_31657379_31657479_31657624_31657724_31658063
WTC11_00077650	chr6	+	897	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	11	0	11	0	multi-exon	FALSE	canonical	3	13	junction_1	432.954353508799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666194	True	NA	17	True	AATAAA	-20	NA	31666302	31670070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
WTC11_00077651	chr6	+	860	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	76	0	76	0	multi-exon	FALSE	canonical	2	6	junction_1	435.543593940058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666322	False	NA	17	True	AATAAA	-20	NA	31666430	31670070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
WTC11_00077652	chr6	+	3058	20	FSM	ENSG00000204410.16	ENST00000650702.1	3053	20	-5	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	23.2851765289289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAAGTTTATTTTGAA	31738284	True	NA	NA	False	NA	NA	NA	31740004	31762652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740221_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744300_31744545_31744582_31747386_31747433_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759513_31759708_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
WTC11_00077653	chr6	+	3872	28	NIC	ENSG00000255152.8	novel	3991	29	NA	NA	-15	0	intron_retention	FALSE	canonical	3	26	junction_7	15.1133803670115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGTTTGTTTCTCA	31738284	True	NA	26	True	AATAAA	-37	NA	31740004	31764850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
WTC11_00077654	chr6	+	4267	26	NNC	ENSG00000255152.8	novel	3991	29	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	7	junction_7	16.9160751949145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTGGTTTGTTTCTC	31738295	True	NA	25	True	AATAAA	-36	NA	31740015	31764849	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744304_31744545_31744582_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31762186_31762419_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
WTC11_00077656	chr6	+	574	2	FSM	ENSG00000228727.9	ENST00000494299.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCACCCAGGATTCAAAG	NA	False	NA	NA	False	NA	NA	NA	31763619	31764299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31764160_31764265
WTC11_00077657	chr6	+	976	5	FSM	ENSG00000204387.14	ENST00000395789.5	952	5	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	277.892402738902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31835410_31835452_31836294_31836518_31837235_31837436_31839542
WTC11_00077658	chr6	+	712	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	366	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31837235_31837436_31839542
WTC11_00077659	chr6	+	1659	8	FSM	ENSG00000204344.16	ENST00000375331.7	1663	8	0	4	0	1	multi-exon	FALSE	canonical	1	3	junction_1	29.9134806823046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGATGTCCTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	31971830	31981447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972217_31972301_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
WTC11_00077660	chr6	+	1405	7	FSM	ENSG00000204344.16	ENST00000492583.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	30.9408036956594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCTCTCGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	31971898	31981164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
WTC11_00077661	chr6	+	1198	7	FSM	ENSG00000204344.16	ENST00000685781.1	1211	7	13	0	2	0	multi-exon	FALSE	canonical	3	57	junction_1	13.4989711542111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972009	True	NA	NA	False	AATAAA	-17	NA	31972375	31981446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
WTC11_00077662	chr6	+	956	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	100	-17	-54	0	multi-exon	FALSE	canonical	2	6	junction_1	33.2686038180144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972114	True	NA	NA	False	AATAAA	-17	NA	31972480	31981446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
WTC11_00077663	chr6	+	1140	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	-12	0	8	0	multi-exon	FALSE	canonical	3	71	junction_2	9.17823512446701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972176	False	NA	NA	False	AATAAA	-17	NA	31972542	31981446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
WTC11_00077665	chr6	+	1805	17	NIC	ENSG00000258388.7	novel	4181	21	NA	NA	-94	-273	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	55.643641539263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTCTGGGATTGGCCGA	32154357	False	NA	NA	False	NA	NA	NA	32154369	32168008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_32154395_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32164578_32164658_32166137_32166233_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
WTC11_00077666	chr6	+	1858	8	ISM	ENSG00000221988.13	ENST00000324816.11	1906	9	235	-3	-77	0	intron_retention	FALSE	canonical	3	48	junction_1	31.4662112269589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32154363	False	NA	18	True	AATAAA	-18	NA	32154375	32163678	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567
WTC11_00077667	chr6	+	468	1	FSM	ENSG00000237285.1	ENST00000432375.1	960	1	728	-236	728	236	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGGGTTTTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	32325946	32326414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32325900_32326400
WTC11_00077668	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.06155281280883	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	NA	False	NA	25	True	AATAAA	-25	NA	32439886	32445046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
WTC11_00077669	chr6	+	386	2	FSM	ENSG00000223865.11	ENST00000469120.1	693	2	96	211	96	-211	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTAGTGCCGGGCGGAAA	NA	False	NA	NA	False	NA	NA	NA	33076105	33081021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33076142_33080671
WTC11_00077670	chr6	+	468	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-89	348	-1	-348	multi-exon	FALSE	canonical	3	19	junction_1	42.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGCTACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	33116654	33118433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33116833_33116973_33117221_33118390
WTC11_00077671	chr6	+	715	3	NNC	ENSG00000224557.8	novel	1219	2	NA	NA	-1	-348	intron_retention	FALSE	canonical	2	5	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGCTACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	33116654	33118433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33117221_33118090_33118197_33118390
WTC11_00077674	chr6	+	2120	2	FSM	ENSG00000230313.1	ENST00000414398.1	717	2	-239	-1164	-239	1164	multi-exon	FALSE	canonical	2	11	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTGATCAATAAAGATT	NA	False	NA	NA	False	ATTAAA	-43	NA	33144543	33148931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33144947_33147214
WTC11_00077676	chr6	+	706	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	-21	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	13058.9644008329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029961	True	NA	6	True	AATAAA	-19	NA	33272074	33276510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
WTC11_00077677	chr6	+	2163	15	NIC	ENSG00000112511.18	novel	1099	6	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_11	30.6431068920891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	NA	False	NA	8	True	AATAAA	-15	NA	33410392	33416439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33410506_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
WTC11_00077680	chr6	+	5976	19	FSM	ENSG00000197283.18	ENST00000629380.3	6010	19	34	0	34	0	multi-exon	TRUE	canonical	1	1	junction_13	8.04539589216891	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTGCCGACTTTCTTA	33420041	False	NA	22	True	AATAAA	-18	NA	33420103	33453689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33420332_33423476_33423599_33425797_33425904_33432160_33432253_33432684_33432807_33435151_33435306_33435514_33435614_33437667_33438292_33438418_33438564_33438774_33438920_33440728_33440966_33441172_33441375_33441580_33441760_33442452_33442495_33442888_33443961_33444443_33444618_33446574_33446787_33447842_33447934_33451759
WTC11_00077683	chr6	+	3080	4	ISM	ENSG00000197283.18	ENST00000293748.9	4556	20	25498	-1294	-903	0	3prime_fragment	FALSE	canonical	3	11	junction_3	9.84321537348893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTGCCGACTTTCTTA	33445783	False	NA	22	True	AATAAA	-18	NA	33445807	33453689	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_33446787_33447842_33447934_33448788_33448869_33451759
WTC11_00077684	chr6	+	570	2	FSM	ENSG00000213588.6	ENST00000612775.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATGCGCCTCGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	33453969	33455337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33454232_33455029
WTC11_00077686	chr6	+	2924	15	NNC	ENSG00000065029.15	novel	2653	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_14	42.6844735906897	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259156	False	NA	8	True	AATAAA	-14	NA	35259603	35295983	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292539_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35294779_35294908_35295143
WTC11_00077687	chr6	+	4052	9	NNC	ENSG00000112033.14	novel	3774	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	42.0795377826325	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGACTGGAAGCTGA	35340481	True	NA	15	True	AATAAA	-17	NA	35342552	35428176	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_35342682_35347066_35347151_35383576_35383892_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
WTC11_00077688	chr6	+	1191	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	-127	5	-120	0	multi-exon	FALSE	canonical	3	9710	junction_1	1963.28888602773	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	35468249	True	NA	23	True	AATAAA	-15	NA	35468280	35470780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
WTC11_00077690	chr6	+	497	1	FSM	ENSG00000219023.1	ENST00000403958.1	392	1	-58	-47	-58	47	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGACAGGGTCTTGC	NA	False	NA	NA	False	AATAAA	-20	NA	35555814	35556311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35555800_35556300
WTC11_00077693	chr6	+	509	4	FSM	ENSG00000196748.10	ENST00000360454.6	488	4	-21	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.3648246606609	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776316	True	NA	2	True	ATTAAA	-14	NA	35776593	35779552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35776703_35777458_35777582_35777850_35777930_35779354
WTC11_00077695	chr6	+	1816	11	NIC	ENSG00000156711.17	novel	6316	12	NA	NA	1	845	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	25.0449595727364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGACATGAATTCCAG	36130022	True	NA	32	True	AATAAA	-18	NA	36130513	36140052	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
WTC11_00077697	chr6	+	1342	6	ISM	ENSG00000112078.14	ENST00000373731.7	5384	8	8	9046	1	-5311	5prime_fragment	FALSE	canonical	3	158	junction_3	27.2954208613826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTCTCACTCCTGCCC	36439637	True	NA	98	True	CATAAA	-19	NA	36443007	36482095	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561
WTC11_00077699	chr6	+	2054	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	48	0	18	0	multi-exon	FALSE	canonical	2	7	junction_1	112.5	6261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676261	True	NA	30	True	AATAAA	-24	NA	36676507	36687337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36676525_36684096_36684547_36685750
WTC11_00077700	chr6	+	2285	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	-18	0	-18	0	multi-exon	TRUE	canonical	2	10	junction_1	111	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36674294	True	NA	30	True	AATAAA	-24	NA	36678691	36687337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36678940_36684096_36684547_36685750
WTC11_00077701	chr6	+	4083	9	NNC	ENSG00000198663.17	novel	6763	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	17.6210101867061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	36884594	True	NA	14	True	ATTAAA	-19	NA	36885951	36928964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346_36925117_36927696
WTC11_00077703	chr6	+	422	2	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTAATCTCCTTTTGT	39263825	True	NA	NA	False	AATAAA	-16	NA	39263867	39270381	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_39264009_39270100
WTC11_00077704	chr6	+	6299	25	FSM	ENSG00000146122.17	ENST00000274867.9	6185	25	-118	4	-40	0	multi-exon	TRUE	canonical	1	2	junction_4	3.39934634239519	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTGCCTTTAAACTT	NA	False	NA	16	True	ATTAAA	-16	NA	39792257	39904865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39792466_39856246_39856471_39860927_39861018_39864432_39864508_39864979_39865075_39867509_39867844_39868822_39868934_39870339_39870444_39871505_39871573_39873237_39873356_39875329_39875469_39878202_39878262_39878403_39878589_39879177_39879478_39883961_39884070_39887485_39887593_39888678_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
WTC11_00077705	chr6	+	3871	26	FSM	ENSG00000146122.17	ENST00000633794.1	3871	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.58307130824939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGGAATCTGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	39792297	39902450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39792466_39856246_39856471_39860927_39861018_39864432_39864508_39864979_39865075_39867509_39867844_39868822_39868934_39870339_39870444_39871505_39871573_39873237_39873356_39875329_39875469_39878202_39878262_39878403_39878589_39879177_39879478_39883961_39884070_39886420_39886448_39887485_39887593_39888678_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
WTC11_00077706	chr6	+	782	2	FSM	ENSG00000204091.8	ENST00000660989.1	856	2	74	0	74	0	multi-exon	FALSE	canonical	3	11	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGGGCTGATTGGTGT	40337067	False	NA	9	True	AATAAA	-20	NA	40337086	40379890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_40337260_40379281
WTC11_00077707	chr6	+	1582	1	FSM	ENSG00000204091.8	ENST00000665433.1	1582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGGTGTGCTGATTCA	40378305	True	NA	18	True	AATAAA	-29	NA	40378317	40379899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_40378300_40379900
WTC11_00077708	chr6	+	505	2	FSM	ENSG00000161912.18	ENST00000435541.2	514	2	0	9	0	-9	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTAAAACATGCCACTT	NA	False	NA	9	True	AATAAA	-10	NA	41139926	41140823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41140206_41140597
WTC11_00077709	chr6	+	3043	9	FSM	ENSG00000124593.16	ENST00000487182.5	3043	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	584.255067906989	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCATTTTATTCTTTT	41780730	True	NA	27	True	AATAAA	-14	NA	41780771	41789891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41780827_41781349_41781521_41783461_41784239_41784934_41785073_41785336_41785541_41786127_41786333_41786761_41787826_41789231_41789337_41789567
WTC11_00077710	chr6	+	494	2	FSM	ENSG00000112578.10	ENST00000494032.1	572	2	0	78	0	-78	multi-exon	FALSE	canonical	3	177	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAAAGTTCCCACAGG	41919080	True	NA	NA	False	NA	NA	NA	41921529	41927566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41921831_41927373
WTC11_00077711	chr6	+	7915	47	FSM	ENSG00000024048.11	ENST00000372899.6	7891	47	-24	0	-24	0	multi-exon	FALSE	canonical	2	6	junction_10	23.7406433663457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	42560400	True	NA	6	True	AATAAA	-21	NA	42564004	42693505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617239_42617339_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
WTC11_00077712	chr6	+	7904	47	NNC	ENSG00000024048.11	novel	7891	47	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_32	21.1247532172026	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	42560408	True	NA	6	True	AATAAA	-21	NA	42564012	42693505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665411_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
WTC11_00077713	chr6	+	6433	12	NIC	ENSG00000112624.13	novel	6501	13	NA	NA	-25	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	9.67488014319165	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTGATTGTCTTGAT	42781560	True	NA	10	True	AATACA	-22	NA	42782026	42868559	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_42782102_42822017_42822064_42822795_42822845_42822934_42823004_42828492_42830173_42852091_42852198_42853637_42853739_42855855_42855918_42857090_42857237_42860261_42860357_42862509_42862613_42864658
WTC11_00077714	chr6	+	1005	1	FSM	ENSG00000124541.7	ENST00000607555.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGTCTTTGCTTGG	43033137	False	NA	7	True	TATAAA	-8	NA	43033151	43034156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43033200_43034200
WTC11_00077715	chr6	+	7800	35	Fusion	ENSG00000112655.16_ENSG00000137171.15	novel	4222	20	NA	NA	0	0	multi-exon	TRUE	canonical	3	43	junction_1	372.038689294783	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43058558	True	NA	11	True	AATAAA	-14	NA	43059630	43161712	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
WTC11_00077717	chr6	+	2662	16	NNC	ENSG00000137171.15	novel	2770	17	NA	NA	10	-14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.0169720167907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAATCAGGTAACCTT	43059592	False	NA	-4	True	NA	NA	NA	43059904	43075073	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_43060281_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
WTC11_00077719	chr6	+	7779	41	FSM	ENSG00000112659.14	ENST00000252050.9	7759	41	-20	0	-8	0	multi-exon	TRUE	canonical	2	11	junction_7	5.62561107791856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGAGCAGGCTGACA	43181682	True	NA	14	True	AATAAA	-20	NA	43182175	43224587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43186959_43187096_43187245_43187440_43187712_43188119_43188522_43188716_43193000_43193209_43196068_43196266_43196644_43196863_43198608_43198856_43199265_43199372_43199928_43200157_43200435_43200527_43200662_43200835_43202715_43202822_43203108_43203205_43203416_43203593_43203853_43203988_43204359_43204540_43204747_43204858_43204932_43205116_43205262_43205424_43206006_43206236_43206320_43206511_43213148_43213295_43213437_43213568_43213712_43213913_43215078_43215327_43216157_43216504_43220458_43220600_43220746_43220912_43221157_43221322_43221684_43221779_43222315_43222391_43222530_43222642_43222778_43222897_43223263_43223398_43224094_43224169_43224249
WTC11_00077722	chr6	+	4792	22	NNC	ENSG00000124574.15	novel	5088	20	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	22.742071454882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCTGAGGTCTCCTC	43427316	True	NA	13	True	ATTAAA	-17	NA	43427878	43450422	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_43427968_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438336_43438391_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
WTC11_00077723	chr6	+	4746	21	NIC	ENSG00000124574.15	novel	5088	20	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	15.0315501529283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGAGGTCTCCTCTGTG	43427312	True	NA	17	True	ATTAAA	-21	NA	43427874	43450426	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43427968_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
WTC11_00077724	chr6	+	4916	21	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	338	-1	23	1	3prime_fragment	FALSE	canonical	3	31	junction_1	13.3225372958757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGGTCTCCTCTGTGTG	43427316	True	NA	19	True	ATTAAA	-23	NA	43427878	43450428	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
WTC11_00077725	chr6	+	2524	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	48	0	2	0	multi-exon	FALSE	canonical	3	7	junction_1	45.9728180558904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474753	True	NA	17	True	AATAAA	-18	NA	43477570	43506556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
WTC11_00077726	chr6	+	2656	10	NIC	ENSG00000137221.14	novel	2751	11	NA	NA	11	-1	intron_retention	FALSE	canonical	3	64	junction_3	26.9242192133201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCTAACTTGTCTTAA	43474766	True	NA	13	True	AATAAA	-14	NA	43477583	43506552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
WTC11_00077727	chr6	+	2176	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	4	365	4	-364	multi-exon	FALSE	canonical	2	2	junction_2	1.92028643696715	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCTCAGCCATGGG	43644991	True	NA	NA	False	NA	NA	NA	43645039	43672235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
WTC11_00077728	chr6	+	2055	8	FSM	ENSG00000112715.26	ENST00000413642.8	1197	8	-512	-346	11	0	multi-exon	FALSE	canonical	2	7	junction_6	76.2530695267076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATATATATAAAAATAAA	43763790	True	NA	NA	False	NA	NA	NA	43770194	43784935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43780731_43780786_43781955_43782088_43784540
WTC11_00077729	chr6	+	5210	7	NIC	ENSG00000112715.26	novel	3609	8	NA	NA	11	-180	intron_retention	FALSE	canonical	3	74	junction_5	47.8832492167726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	43763790	True	NA	12	True	AATAGA	-18	NA	43770194	43786259	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43780804_43781955_43782088_43784540
WTC11_00077730	chr6	+	3157	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	32.2869686887363	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44124634	True	NA	14	True	AATAAA	-19	NA	44127641	44155519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44127679_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
WTC11_00077732	chr6	+	1622	2	NIC	ENSG00000137225.13	novel	2718	23	NA	NA	6025	3	intron_retention	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTGTGTTTTTATG	NA	False	NA	10	True	AATAAA	-21	NA	44182640	44184404	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44183764_44183905
WTC11_00077733	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	670.531609287179	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	44218558	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00077735	chr6	+	2030	13	FSM	ENSG00000112759.19	ENST00000652453.1	2030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.742111872665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCCCCATGCCCAGT	44223740	True	NA	-61	True	NA	NA	NA	44223791	44234002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223926_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00077737	chr6	+	1240	1	FSM	ENSG00000277769.1	ENST00000613117.1	1240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGCACACTATCAACACT	NA	False	NA	NA	False	AAAACA	-9	NA	45098020	45099260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_45098000_45099300
WTC11_00077742	chr6	+	7496	12	FSM	ENSG00000096093.16	ENST00000635866.1	2301	12	-396	-4799	115	0	multi-exon	FALSE	canonical	0	0	junction_3	21.3800710479766	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	NA	False	NA	NA	False	AATAAA	-30	NA	52419857	52497198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
WTC11_00077743	chr6	+	1829	10	FSM	ENSG00000096093.16	ENST00000636379.1	1829	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4405515826241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGATTGGTGCCTTA	52419631	True	NA	92	True	ACTAAA	-14	NA	52420378	52492503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52420474_52423945_52424168_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
WTC11_00077751	chr6	+	6258	5	FSM	ENSG00000168143.9	ENST00000306858.8	6244	5	-14	0	-14	0	multi-exon	FALSE	canonical	1	5	junction_1	4.03112887414927	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTAAGCTATTGTTT	54846377	True	NA	NA	False	AATAAA	-32	NA	54846756	54945099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_54846827_54870186_54870691_54926370_54926536_54927507_54927633_54939705
WTC11_00077752	chr6	+	1972	5	NIC	ENSG00000151917.18	novel	2568	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	10.7354552767919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTCTTGTTTCTTTA	56955154	False	NA	NA	False	AATAAA	-20	NA	56955372	57027346	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_56955461_56981710_56981931_56992377_56992556_57015132_57015354_57026081
WTC11_00077753	chr6	+	468	1	FSM	ENSG00000276576.1	ENST00000612071.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCCTAGCAGCTTCCG	57029510	False	NA	NA	False	NA	NA	NA	57029520	57029988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57029500_57030000
WTC11_00077754	chr6	+	1444	4	FSM	ENSG00000112200.17	ENST00000370710.10	375	4	-169	-900	8	-279	multi-exon	FALSE	canonical	1	2	junction_3	136.587782111806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGACATGAATCTCTG	57082051	True	NA	NA	False	TTTAAA	-14	NA	57090037	57100510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57099468
WTC11_00077757	chr6	+	1392	3	FSM	ENSG00000285838.2	ENST00000647954.1	1433	3	41	0	41	0	multi-exon	FALSE	canonical	2	2	junction_2	3	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGAGATGTTCATATT	68040318	False	NA	NA	False	NA	NA	NA	68040330	68083574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_68040599_68040840_68040942_68082551
WTC11_00077758	chr6	+	6461	23	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	21	junction_3	38.8770311844797	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCTTGTAATCCTTTG	70407371	True	NA	18	True	AATAAA	-30	NA	70413436	70561170	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70415290_70415377_70426569_70426765_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
WTC11_00077759	chr6	+	5787	23	NNC	ENSG00000082269.17	novel	5042	22	NA	NA	3	0	intron_retention	FALSE	canonical	2	8	junction_3	39.9244120518506	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTTGTAATCCTTTGC	70407445	True	NA	19	True	AATAAA	-31	NA	70413510	70561171	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_70413703_70415290_70415377_70426569_70426752_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
WTC11_00077760	chr6	+	289	2	FSM	ENSG00000154079.6	ENST00000468640.1	332	2	-13	56	-13	-56	multi-exon	FALSE	canonical	3	9	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGTTGGAAATTTTT	70562182	True	NA	6	True	AGTAAA	-18	NA	70566903	70567603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70567005_70567415
WTC11_00077761	chr6	+	630	1	FSM	ENSG00000271967.1	ENST00000606298.1	543	1	-347	260	-347	-260	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTGGTTAGATTGAAT	NA	False	NA	NA	False	NA	NA	NA	70596090	70596720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70596100_70596700
WTC11_00077762	chr6	+	719	1	FSM	ENSG00000218350.1	ENST00000402650.1	695	1	-24	0	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCACTAAGAGGCCTTGTG	NA	False	NA	NA	False	GATAAA	-22	NA	71165051	71165770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_71165100_71165800
WTC11_00077765	chr6	+	3612	12	FSM	ENSG00000135297.17	ENST00000680686.1	3618	12	6	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	51.5735853974086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00077766	chr6	+	4239	13	FSM	ENSG00000135297.17	ENST00000679411.1	4239	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	88.4759854423787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00077767	chr6	+	937	3	FSM	ENSG00000225793.4	ENST00000607221.3	1580	3	39	604	4	-604	multi-exon	FALSE	canonical	2	2	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCTTTAGATTGACAGC	75284970	True	NA	NA	False	NA	NA	NA	75285058	75291549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75285310_75290253_75290339_75290948
WTC11_00077768	chr6	+	4377	24	NIC	ENSG00000112701.18	novel	4644	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	63	junction_6	129.659157657534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	75598347	True	NA	16	True	AATAAA	-19	NA	75601883	75715904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
WTC11_00077769	chr6	+	3713	17	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	73	junction_2	135.263270490366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAATCTGCTGAATTG	75601773	False	NA	10	True	ATTAAA	-25	NA	75601931	75679867	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
WTC11_00077770	chr6	+	8617	34	NIC	ENSG00000196586.17	novel	8642	36	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_28	45.2605151676548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75744474	True	NA	10	True	AATAAA	-25	NA	75749197	75919537	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75894813_75894841_75895230_75895261_75907604_75907709_75908495_75908628_75914062_75914282_75914812
WTC11_00077771	chr6	+	8550	33	FSM	ENSG00000196586.17	ENST00000369985.9	8546	33	-4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_30	48.3056673693677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75744511	True	NA	10	True	AATAAA	-25	NA	75749234	75919537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75907604_75907709_75908495_75908628_75911671_75911699_75914062_75914282_75914812
WTC11_00077773	chr6	+	8646	36	FSM	ENSG00000196586.17	ENST00000664640.1	8642	36	-4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_33	62.8809954742825	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75744511	True	NA	10	True	AATAAA	-25	NA	75749234	75919537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75911671_75911699_75914062_75914282_75914812
WTC11_00077774	chr6	+	5526	35	NIC	ENSG00000196586.17	novel	8642	36	NA	NA	20	-121	combination_of_known_junctions	FALSE	canonical	3	27	junction_30	51.0892766326869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTATCTTTTGAAGGC	75744558	True	NA	NA	False	ATTAAA	-31	NA	75749281	75916491	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75914062_75914282_75914812
WTC11_00077775	chr6	+	1006	2	FSM	ENSG00000286340.2	ENST00000669651.1	2229	2	269	954	232	-7	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAATTATAGTGGGATT	79078779	False	NA	NA	False	AATAAA	-14	NA	79078845	79080417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_79078871_79079436
WTC11_00077779	chr6	+	1429	4	FSM	ENSG00000233967.7	ENST00000452402.6	1429	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1.69967317119759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTCCTGTCAAATC	NA	False	NA	NA	False	AATAAA	-15	NA	80443343	80466674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80443539_80453156_80453262_80462871_80463073_80465746
WTC11_00077780	chr6	+	2123	1	FSM	ENSG00000260645.2	ENST00000569267.1	2123	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTATTCTAAATCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	80466957	80469080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80467000_80469100
WTC11_00077787	chr6	+	2113	3	FSM	ENSG00000203872.7	ENST00000608326.1	2110	3	-4	1	-4	-1	multi-exon	FALSE	canonical	2	7	junction_1	1.5	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTGATTCCCCAGCC	NA	False	NA	2	True	AATAAA	-14	NA	87347497	87365461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87348907_87356300_87356504_87364960
WTC11_00077793	chr6	+	1286	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	-6	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.6544084500616	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825697	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
WTC11_00077795	chr6	+	6747	10	NNC	ENSG00000118412.13	novel	6719	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.2765824984272	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTCGAATGTTTCTT	89825724	True	NA	19	True	AATAAA	-22	NA	89829920	89874436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873756
WTC11_00077796	chr6	+	1302	8	FSM	ENSG00000118412.13	ENST00000548224.2	1300	8	-2	0	0	0	multi-exon	FALSE	canonical	2	28	junction_6	32.5614019655049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATTCGAATGTTTC	89825742	True	NA	17	True	AATAAA	-20	NA	89829938	89874434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873805
WTC11_00077797	chr6	+	5418	2	Antisense	novelGene_ENSG00000289178.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	94553824	94559265	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_94559043_94559065
WTC11_00077801	chr6	+	3455	4	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	23.6220236220354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAGAGTTACTAAGAAT	97775721	True	NA	NA	False	TATAAA	-22	NA	97779833	97793660	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_97780096_97781859_97782148_97787395_97787501_97790860
WTC11_00077803	chr6	+	3910	4	FSM	ENSG00000279170.3	ENST00000652704.1	3895	4	-15	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	28.3313724811677	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTACTTTC	99519743	True	NA	1	True	AATAAA	-18	NA	99521017	99553800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99550225
WTC11_00077805	chr6	+	674	5	NNC	ENSG00000279170.3	novel	1873	4	NA	NA	-12	194	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	20.4740689654011	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGCCTCTTTTCATCT	99519788	True	NA	82	True	AGTAAA	-16	NA	99521062	99531914	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_99521148_99521714_99521801_99526063_99526110_99531362_99531537_99531631
WTC11_00077806	chr6	+	1434	7	FSM	ENSG00000164418.22	ENST00000683747.1	1857	7	-21	444	17	-444	multi-exon	FALSE	canonical	1	2	junction_1	3.34995854037363	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACATATAAACTTCAGTT	101393577	False	NA	NA	False	NA	NA	NA	101393724	101686430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_101393838_101398984_101399393_101621948_101622117_101626379_101626638_101676622_101676805_101682552_101682607_101686179
WTC11_00077808	chr6	+	2125	3	NIC	ENSG00000130349.10	novel	1158	4	NA	NA	19	1076	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	54.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTACCTTTATGACCTAA	107026331	True	NA	11	True	AATAAA	-23	NA	107028231	107041983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_107028272_107039748_107040231_107040380
WTC11_00077810	chr6	+	1563	5	NNC	ENSG00000130349.10	novel	1146	5	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	95.2506561657189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	107028154	True	NA	15	True	AATAAA	-15	NA	107028278	107051335	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_107028925_107030024_107030108_107039748_107040231_107044259_107044333_107051056
WTC11_00077823	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	258.13562326808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	110874759	False	NA	30	True	AATAAA	-29	NA	110874769	110895713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
WTC11_00077824	chr6	+	4745	6	FSM	ENSG00000123505.19	ENST00000612642.4	4745	6	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	72.1149083061193	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTGTTGCCCTGTTT	110888263	False	NA	29	True	AATAAA	-28	NA	110888285	110895712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
WTC11_00077825	chr6	+	3643	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	-22	0	-10	0	multi-exon	FALSE	canonical	2	11	junction_2	326.560269131136	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970720	True	NA	17	True	AATAAA	-17	NA	110982027	111028263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
WTC11_00077832	chr6	+	3319	4	NNC	ENSG00000203778.8	novel	2551	4	NA	NA	3	774	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	95.5021814759572	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATTAAGTACAAAGAAAA	112085541	True	NA	NA	False	TATAAA	-7	NA	112087593	112103564	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_112087721_112097043_112097202_112099269_112099409_112100669
WTC11_00077833	chr6	+	514	1	FSM	ENSG00000218208.1	ENST00000402798.1	447	1	-22	-45	-22	45	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTAACAACAACAACAACAA	NA	False	NA	NA	False	AATAAA	-9	NA	113581478	113581992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_113581500_113582000
WTC11_00077835	chr6	+	4041	3	NIC	ENSG00000228624.8	novel	786	6	NA	NA	-3139	-2	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	36.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATATTGTGCAGCCTGTT	114422446	False	NA	NA	False	NA	NA	NA	114422472	114456632	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_114425673_114448966_114449032_114455856
WTC11_00077839	chr6	+	1979	15	FSM	ENSG00000164465.19	ENST00000296955.12	1979	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	22.7866099241799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGTAAAATTTTATTT	117481884	True	NA	NA	False	ATTAAA	-22	NA	117482656	117569858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540667_117540816_117540917_117541026_117543123_117543212_117544527_117544578_117545477_117545598_117569619
WTC11_00077841	chr6	+	4478	7	FSM	ENSG00000196376.11	ENST00000621341.1	4481	7	3	0	3	0	multi-exon	FALSE	canonical	3	23	junction_6	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTTTTCTTTTGTGT	NA	False	NA	15	True	AATAAA	-27	NA	118154444	118317676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_118154621_118235508_118235637_118266994_118267155_118275458_118275616_118277493_118277547_118285183_118285339_118314027
WTC11_00077842	chr6	+	1230	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8606	5459	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	49	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGATGACTCCGATAAG	118572305	True	NA	4	True	AATAAA	-18	NA	118574265	118582299	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_118574700_118576250_118576476_118581728
WTC11_00077845	chr6	+	701	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCGCACAAGAACTTCCAA	NA	False	NA	NA	False	NA	NA	NA	122841319	122842020	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122841300_122842000
WTC11_00077847	chr6	+	5410	1	ISM	ENSG00000146373.17	ENST00000521654.7	11433	6	124784	3	40621	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTTGTCTTTTTTTCC	NA	False	NA	5	True	AATAAA	-16	NA	125087220	125092630	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_125087200_125092600
WTC11_00077849	chr6	+	1541	6	NNC	ENSG00000135547.9	novel	2626	5	NA	NA	12	-1331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.2315209755425	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACGAGTGGAAATGTGG	125748276	True	NA	11	True	AATAAA	-18	NA	125749643	125759938	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_125749860_125750259_125750518_125751800_125751880_125752006_125752091_125754464_125754547_125759116
WTC11_00077853	chr6	+	1006	3	FSM	ENSG00000118507.18	ENST00000537868.5	1006	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTTTGGGATTTT	131199641	True	NA	NA	False	NA	NA	NA	131199990	131283184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131200063_131219660_131219809_131282398
WTC11_00077859	chr6	+	1028	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_2	140	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTCTTCATTTGAGGT	131901788	False	NA	NA	False	NA	NA	NA	131901965	131907512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131903946_131904235_131906958
WTC11_00077860	chr6	+	733	2	NNC	ENSG00000236673.5	novel	601	3	NA	NA	9	-18	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTCTTCATTTGAGGT	131901795	False	NA	NA	False	NA	NA	NA	131901972	131907512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_131902152_131906958
WTC11_00077863	chr6	+	613	3	NIC	ENSG00000225177.6	novel	917	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	12	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	138692048	True	NA	37	True	AATAAA	-19	NA	138692549	138697288	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_138692618_138696596_138696756_138696902
WTC11_00077868	chr6	+	1276	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	83.429611050274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAAAGCCACCCTGA	143059980	False	NA	-16	True	NA	NA	NA	143060857	143340283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
WTC11_00077869	chr6	+	3405	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	-12	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	88.1400400877301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	143058864	True	NA	NA	False	AATAAA	-26	NA	143060888	143190597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
WTC11_00077884	chr6	+	1464	2	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTAAATTAATCTTTG	152682766	True	NA	NA	False	AATAAA	-20	NA	152683300	152689205	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_152683436_152687876
WTC11_00077893	chr6	+	256	2	NNC	ENSG00000130338.13	novel	680	2	NA	NA	0	-66991	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTGTTCCTTCTCTT	158228936	True	NA	NA	False	TATAAA	-18	NA	158232235	158245367	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_158232304_158245179
WTC11_00077897	chr6	+	1763	6	ISM	ENSG00000146457.16	ENST00000614346.4	1623	7	85	-5	85	0	intron_retention	FALSE	canonical	3	76	junction_1	149.325952198538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	159727057	False	NA	15	True	ATTAAA	-20	NA	159727082	159749421	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
WTC11_00077908	chr6	+	7731	32	NIC	ENSG00000130396.21	novel	5778	33	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	97	junction_2	31.3820073452227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGGCAGTGGTTTTCA	167821018	True	NA	34	True	ATTAAA	-22	NA	167826921	167972028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167827238_167864550_167864747_167870382_167870499_167872213_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966046_167969113_167969199_167969781
WTC11_00077913	chr6	-	1250	1	FSM	ENSG00000188996.5	ENST00000380907.3	1162	1	-150	62	-150	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTATATTTTGTTGAGCC	NA	False	NA	-63	True	NA	NA	NA	657250	656000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_656000_657200
WTC11_00077914	chr6	-	1919	4	FSM	ENSG00000124570.21	ENST00000644697.1	2120	4	212	-11	212	0	multi-exon	FALSE	canonical	3	247	junction_1	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2955551	False	NA	-1	True	AATAAA	-28	NA	2955670	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591
WTC11_00077915	chr6	-	3597	6	FSM	ENSG00000124570.21	ENST00000643314.1	3265	6	-332	0	-332	0	multi-exon	FALSE	canonical	3	247	junction_1	13.1848397790796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2961601	False	NA	-1	True	AATAAA	-28	NA	2961659	2948158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167
WTC11_00077916	chr6	-	1642	5	NNC	ENSG00000137267.7	novel	1616	4	NA	NA	0	56947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.299019644015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATATTGGTTGAGATT	-3136530	True	NA	NA	False	NA	NA	NA	3157543	3096549	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_3096577_3153665_3154924_3155624_3155736_3156043_3156153_3157406
WTC11_00077917	chr6	-	1557	4	FSM	ENSG00000137267.7	ENST00000679400.1	1760	4	34	169	34	0	multi-exon	FALSE	canonical	0	0	junction_3	726.380524702216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-3156709	False	NA	-11	True	AATAAA	-18	NA	3156776	3153665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3156697
WTC11_00077919	chr6	-	1545	3	FSM	ENSG00000230269.7	ENST00000435043.3	1651	3	12	94	12	-90	multi-exon	FALSE	canonical	2	9	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATATTTTACTTCCA	-3195675	True	NA	96	True	AATAAA	-13	NA	3195772	3182719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3183727_3190826_3191258_3195665
WTC11_00077920	chr6	-	1518	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	12	90	12	-90	multi-exon	FALSE	canonical	2	7	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATATTTTACTTCCA	-3195675	True	NA	96	True	AATAAA	-13	NA	3195772	3182719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3183727_3190826_3191231_3195665
WTC11_00077921	chr6	-	1291	9	NIC	ENSG00000198721.13	novel	1368	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	218.759249804437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	-4125419	True	NA	-7	True	AATAAA	-30	NA	4135575	4115692	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
WTC11_00077923	chr6	-	1029	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	13	0	13	0	multi-exon	FALSE	canonical	2	3	junction_7	83.5615378762556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	-5002784	False	861	-36	True	NA	NA	NA	5003645	4995077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
WTC11_00077925	chr6	-	1168	2	FSM	ENSG00000214113.11	ENST00000468929.5	1168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-5260637	False	4530	-7	True	AATAAA	-22	NA	5260742	5108418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5109492_5260647
WTC11_00077926	chr6	-	429	1	FSM	ENSG00000217239.3	ENST00000407959.1	354	1	-29	-46	-29	46	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGCAAGGGGGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	5788728	5788299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5788300_5788700
WTC11_00077929	chr6	-	1788	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	20	0	-20	multi-exon	FALSE	canonical	1	2	junction_2	329.489841354108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTGAAAGGCCTACAAA	-7300281	True	NA	NA	False	AATAAA	-2	NA	7313207	7268325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
WTC11_00077930	chr6	-	902	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	12	-3	12	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAATTACCTTCTGA	-7543055	False	NA	2	True	AATAAA	-21	NA	7543069	7540450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7541054_7542770
WTC11_00077931	chr6	-	663	2	FSM	ENSG00000261189.2	ENST00000687028.1	823	2	157	3	96	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	-7541228	False	NA	-1	True	AATAAA	-18	NA	7541242	7540453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7541054_7541179
WTC11_00077932	chr6	-	3833	2	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATATTTGGGCTATGT	NA	False	NA	-26	True	AATAAA	-16	NA	8009990	8006130	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_8007247_8007273
WTC11_00077934	chr6	-	1866	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	21.1660104885167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGATGTGTTAATAGA	-8432343	True	NA	-7	True	AATAAA	-18	NA	8435530	8413073	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
WTC11_00077936	chr6	-	1815	11	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	27.8174405724179	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAGATGTGTTAATAG	-8432343	True	NA	-8	True	AATAAA	-17	NA	8435530	8413074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
WTC11_00077937	chr6	-	2900	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	14	-11937	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	39.8057784749903	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	-8432282	True	NA	NA	False	AATAAA	-19	NA	8435469	8425010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8427322_8427936_8428059_8429863_8430158_8434384_8434431_8435342
WTC11_00077938	chr6	-	1828	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	17144	0	-15505	5prime_fragment	FALSE	canonical	3	81	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATAACTTAACCACTT	-8432358	True	NA	NA	False	TTTAAA	-23	NA	8435545	8428578	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_8430158_8434384_8434431_8435342
WTC11_00077940	chr6	-	1260	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	230.436763648547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
WTC11_00077941	chr6	-	1167	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	251.767385351103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323081	True	NA	0	True	AATAAA	-16	NA	13328521	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
WTC11_00077942	chr6	-	1173	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	253.487288745522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323085	True	NA	0	True	AATAAA	-16	NA	13328525	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
WTC11_00077943	chr6	-	1115	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	218.79456397381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323086	True	NA	0	True	AATAAA	-16	NA	13328526	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
WTC11_00077944	chr6	-	1275	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	234.084757020588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323086	True	NA	0	True	AATAAA	-16	NA	13328526	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
WTC11_00077945	chr6	-	1312	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	247.841786267789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323086	True	NA	0	True	AATAAA	-16	NA	13328526	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
WTC11_00077946	chr6	-	1036	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	245.129500921905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323088	True	NA	0	True	AATAAA	-16	NA	13328528	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
WTC11_00077947	chr6	-	1094	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	270.77958441015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323089	True	NA	0	True	AATAAA	-16	NA	13328529	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326964_13328455
WTC11_00077948	chr6	-	1199	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	256.301038277691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
WTC11_00077949	chr6	-	2601	3	FSM	ENSG00000145979.18	ENST00000606370.5	2598	3	0	-3	0	3	multi-exon	FALSE	canonical	3	172	junction_1	33.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAATTGTTCAAATGG	-13323115	True	NA	NA	False	ATTAAA	-21	NA	13328555	13318714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13321096_13326786_13326907_13328455
WTC11_00077951	chr6	-	1268	10	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	0	11768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.719500546448	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATAAAAAAGTTGAAG	-13814522	False	NA	NA	False	NA	NA	NA	13814568	13774788	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13774817_13790787_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
WTC11_00077952	chr6	-	3152	2	FSM	ENSG00000226673.2	ENST00000427276.1	3152	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	-14285014	True	NA	-3	True	AATAAA	-19	NA	14285145	14280126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_14283189_14285055
WTC11_00077953	chr6	-	6203	2	ISM	ENSG00000226673.2	ENST00000635227.1	776	3	-1631	-2921	-1631	0	intron_retention	FALSE	canonical	3	82	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	-14287024	False	NA	-3	True	AATAAA	-19	NA	14287085	14280126	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_14283189_14283944
WTC11_00077954	chr6	-	6085	6	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	11.4612390255155	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATTCTATTGAATTCT	-14302456	False	NA	-5	True	AATAAA	-38	NA	14302466	14287115	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14292326_14292999_14293297_14294807_14294934_14295304_14295384_14300157_14300294_14302229
WTC11_00077956	chr6	-	5555	4	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_3	22.1710521977545	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTTATTGGTGCGTG	-14301388	True	NA	-30	True	AATAAA	-14	NA	14302478	14290586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14294934_14295304_14295384_14300157_14301038_14302229
WTC11_00077957	chr6	-	3280	5	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	10.2316909648406	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATCAGCAGTTTTATT	-14302456	False	NA	-38	True	AATAAA	-6	NA	14302466	14290594	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14293297_14294807_14294934_14295304_14295384_14300157_14300294_14302229
WTC11_00077959	chr6	-	1389	9	NIC	ENSG00000047579.20	novel	1383	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	73.1239316161269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661730	True	NA	-5	True	AATAAA	-17	NA	15663057	15522806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_15523220_15524525_15524670_15533239_15533396_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
WTC11_00077961	chr6	-	558	1	FSM	ENSG00000124788.19	ENST00000642969.1	558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCAGCAGCAGCAGC	NA	False	NA	NA	False	NA	NA	NA	16328281	16327723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_16327700_16328300
WTC11_00077962	chr6	-	6924	38	FSM	ENSG00000137177.20	ENST00000378814.9	6924	38	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	7.27222921463444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCATGTCTCTGCAGT	-17987395	False	NA	41	True	NA	NA	NA	17987463	17759182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17760878_17764154_17764947_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
WTC11_00077963	chr6	-	7607	39	NIC	ENSG00000137177.20	novel	6007	39	NA	NA	-477	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	6.70391831510672	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAACACTAATCATT	-17988044	False	NA	-30	True	AATACA	-16	NA	17988112	17759253	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_17760878_17764154_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
WTC11_00077964	chr6	-	5707	37	FSM	ENSG00000137177.20	ENST00000378843.6	5707	37	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.3043936549632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTAAGACACCCCAAT	-17987413	False	1632	NA	False	ATTAAA	-15	NA	17987481	17763694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17764947_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
WTC11_00077965	chr6	-	1892	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-81	51246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.139981767183	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTTCAGCACCATCTC	-18148390	True	NA	NA	False	NA	NA	NA	18155158	18077064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18077094_18129712_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
WTC11_00077966	chr6	-	3008	2	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCGCATGAAAACCCATG	NA	False	NA	NA	False	NA	NA	NA	18759870	18754154	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754545_18757252
WTC11_00077967	chr6	-	1686	3	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	18759871	18754181	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754429_18757252_18758152_18759331
WTC11_00077968	chr6	-	703	3	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-18759025	True	NA	NA	False	AATAAA	-16	NA	18759573	18754185	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754545_18757252_18757355_18759331
WTC11_00077969	chr6	-	3662	2	NNC	ENSG00000260455.2	novel	3692	3	NA	NA	-75438	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGTCCTGTGAG	-22222399	True	NA	NA	False	AATAAA	-21	NA	22222631	22133194	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_22136670_22222444
WTC11_00077970	chr6	-	440	6	FSM	ENSG00000112293.15	ENST00000378243.8	1090	6	110	540	110	-194	multi-exon	FALSE	canonical	2	5	junction_5	2.57681974534503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTATTTACATTTG	-24489448	False	NA	NA	False	NA	NA	NA	24489461	24473618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24473668_24475120_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414
WTC11_00077971	chr6	-	1368	1	FSM	ENSG00000272345.1	ENST00000607014.1	887	1	0	-481	0	481	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGATCTTATTGCTGGAA	-24701774	False	NA	NA	False	NA	NA	NA	24701793	24700425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24700400_24701800
WTC11_00077972	chr6	-	2425	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	17	0	17	0	multi-exon	FALSE	canonical	1	5	junction_13	14.4570369426021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877338	24839358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
WTC11_00077973	chr6	-	3601	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	27	-14	17	0	multi-exon	FALSE	canonical	1	5	junction_13	14.8937062280381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877338	24839358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
WTC11_00077974	chr6	-	2148	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	8.93169345247552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	-24935028	True	NA	NA	False	AATAAA	-21	NA	24935948	24839358	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
WTC11_00077975	chr6	-	706	1	FSM	ENSG00000124610.5	ENST00000244573.5	756	1	14	36	14	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTAACCCAACGGCTC	-25956979	False	60794	NA	False	AGTAAA	-17	NA	26017773	26017067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26017100_26017800
WTC11_00077976	chr6	-	1471	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	11	-971	11	971	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTCTTTTTTACAATA	-25992193	False	NA	NA	False	ATTAAA	-25	NA	26032088	26030617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26030600_26032100
WTC11_00077977	chr6	-	900	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	21	-418	21	418	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTTTGGCGGGAATG	-26168664	False	NA	NA	False	NA	NA	NA	26197265	26196365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26196400_26197300
WTC11_00077978	chr6	-	619	1	FSM	ENSG00000196866.3	ENST00000341023.2	510	1	-1	-108	-1	108	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGTCCATTTTAAAGAT	-26170693	True	NA	NA	False	NA	NA	NA	26199294	26198675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26198700_26199300
WTC11_00077981	chr6	-	804	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	-4	-306	-4	306	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGCAGTCCCAGCTA	-26215428	True	NA	NA	False	ACTAAA	-40	NA	26250639	26249835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26249800_26250600
WTC11_00077982	chr6	-	333	1	FSM	ENSG00000220875.1	ENST00000404612.1	417	1	104	-20	104	20	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTCATTAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	26322188	26321855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26321900_26322200
WTC11_00077985	chr6	-	495	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCGATATTAGAGCTG	-27117232	True	NA	-2	True	NA	NA	NA	27146855	27146360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27146400_27146900
WTC11_00077986	chr6	-	3897	1	FSM	ENSG00000158553.5	ENST00000444565.2	3897	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2668	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTGTGTGAACATATG	NA	False	NA	NA	False	AATAAA	-28	NA	27312273	27308376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27308400_27312300
WTC11_00077987	chr6	-	2804	5	NNC	ENSG00000204789.5	novel	4164	5	NA	NA	5	6	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_4	45.0742443086958	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	-27375254	False	NA	-11	True	AATAAA	-12	NA	27375272	27357824	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370244_27375193
WTC11_00077988	chr6	-	470	1	FSM	ENSG00000271755.1	ENST00000607727.1	2955	1	2476	9	2476	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATAAAAGAAATACCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	27404488	27404018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27404000_27404500
WTC11_00077989	chr6	-	3096	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	5	0	-1	multi-exon	FALSE	canonical	2	16	junction_5	16.1691063451262	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGTCTGTTTTTAATA	NA	False	NA	-5	True	ATTAAA	-17	NA	27473118	27450747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
WTC11_00077991	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	-27739034	True	NA	25	True	TTTAAA	-44	NA	27893185	27892698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27892700_27893200
WTC11_00077992	chr6	-	526	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	160	0	160	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28080970	28078791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28078973_28080625
WTC11_00077993	chr6	-	999	2	NNC	ENSG00000269293.4	novel	1646	4	NA	NA	-1	29221	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAGTGGGAGATTTT	-28136507	True	NA	NA	False	AATAAA	-22	NA	28136835	28090560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28091469_28136744
WTC11_00077994	chr6	-	271	1	FSM	ENSG00000273712.1	ENST00000615674.1	271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGGATCAAGACAGCAG	NA	False	NA	NA	False	NA	NA	NA	28315883	28315612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28315600_28315900
WTC11_00077995	chr6	-	4322	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	-15	-398	1	134	multi-exon	FALSE	canonical	2	7	junction_2	11.160645142643	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTATTTTCTTAATATA	-28398690	True	NA	1	True	AATAAA	-17	NA	28399746	28378820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
WTC11_00077996	chr6	-	5843	6	NNC	ENSG00000187987.10	novel	3150	4	NA	NA	13	10540	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	8.24621125123532	1394	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTTTGTTTAGTTAT	-28442582	True	NA	-3	True	AATAAA	-32	NA	28443467	28421389	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28423841_28424342_28426406_28434451_28435079_28435459_28435608_28435858_28436344_28443398
WTC11_00077997	chr6	-	4574	3	NNC	ENSG00000187987.10	novel	1316	4	NA	NA	14	10532	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	14	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCCCTGATTTTTTGT	-28442581	True	NA	-11	True	AATAAA	-24	NA	28443466	28421397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28423841_28424342_28426406_28443398
WTC11_00077999	chr6	-	3929	20	NIC	ENSG00000204681.11	novel	4299	22	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	3	39	junction_18	45.6499993173399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGAAAAGGCATTAAAG	-29631722	False	NA	64	True	NA	NA	NA	29632385	29602162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300
WTC11_00078000	chr6	-	8561	18	NIC	ENSG00000204681.11	novel	4525	23	NA	NA	-106	65	intron_retention	FALSE	canonical	3	89	junction_17	31.6546022061635	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGAAAAGGCATTAAAG	NA	False	NA	64	True	NA	NA	NA	29633289	29602162	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29631600_29632300
WTC11_00078001	chr6	-	4286	21	FSM	ENSG00000204681.11	ENST00000472823.5	4286	21	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_18	54.2840676441992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	NA	False	NA	-1	True	AATAAA	-24	NA	29633131	29602227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629248_29631395_29631600_29632300_29632386_29632849
WTC11_00078002	chr6	-	7877	19	NIC	ENSG00000204681.11	novel	4299	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	47	junction_18	41.4793195534508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGCAGTCTTCCTGTGA	NA	False	NA	-2	True	AATAAA	-23	NA	29633135	29602228	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29631600_29632300_29632386_29632849
WTC11_00078005	chr6	-	1767	5	NNC	ENSG00000204644.10	novel	2082	5	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	12.6885775404495	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTTTTCCTGAGGA	NA	False	NA	7	True	AATAAA	-28	NA	29681152	29672471	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_29673759_29675385_29675488_29675650_29675811_29675932_29676060_29681061
WTC11_00078006	chr6	-	1591	4	NNC	ENSG00000204644.10	novel	1599	4	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	13.5728487143349	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCTCTTTCTTTGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	29681155	29672487	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_29673759_29675385_29675488_29675932_29676057_29681061
WTC11_00078007	chr6	-	666	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	24	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTCTTTCTCTTCACA	-29748937	True	NA	-1	True	ATTAAA	-18	NA	29749025	29726599	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29727140_29748899
WTC11_00078008	chr6	-	1301	2	FSM	ENSG00000214922.9	ENST00000434086.1	553	2	2	-750	2	750	multi-exon	FALSE	canonical	2	5	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTCAGTAGAAACTT	NA	False	NA	-1	True	AATAAA	-23	NA	29738442	29737008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29738202_29738334
WTC11_00078010	chr6	-	290	1	FSM	ENSG00000285799.1	ENST00000432679.1	129	1	5	-166	5	166	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCATATTATTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	29852486	29852196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29852200_29852500
WTC11_00078013	chr6	-	3706	1	FSM	ENSG00000280128.1	ENST00000624252.1	3706	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAACATACCAAAACCTAT	NA	False	NA	NA	False	GATAAA	-6	NA	30286054	30282348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30282300_30286100
WTC11_00078015	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	124.340258967078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326866	30286727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
WTC11_00078016	chr6	-	7381	1	Genic_Genomic	ENSG00000231074.10	novel	NA	NA	NA	NA	2118	-12564	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCTCCAAGCTTGTATC	-30323587	False	NA	NA	False	NA	NA	NA	30324019	30316638	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_30316600_30324000
WTC11_00078017	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686529	False	687	-5	True	AATAAA	-17	NA	30687216	30676388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
WTC11_00078019	chr6	-	6973	15	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	195	0	intron_retention	FALSE	canonical	3	19	junction_14	85.5132463781048	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30716894	False	NA	-1	True	AATAAA	-19	NA	30716926	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711502_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30716881
WTC11_00078020	chr6	-	6173	14	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_8	81.1514764510019	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30713419	True	NA	-1	True	AATAAA	-19	NA	30717281	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711502_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
WTC11_00078021	chr6	-	6378	15	NNC	ENSG00000137337.16	novel	6968	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_14	89.3453800639715	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30713419	True	NA	-1	True	AATAAA	-19	NA	30717281	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30716881_30717084_30717244
WTC11_00078023	chr6	-	676	1	FSM	ENSG00000272540.1	ENST00000607476.1	773	1	-4	101	-4	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCCATAATTTACCAGCAA	-30723833	False	NA	NA	False	NA	NA	NA	30723881	30723205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30723200_30723900
WTC11_00078024	chr6	-	1349	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	1	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744547	30743198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30743200_30744500
WTC11_00078025	chr6	-	2816	6	NNC	ENSG00000237923.1	novel	799	3	NA	NA	0	2081	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	54.5109163379226	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGGTTACTGACGAG	NA	False	NA	NA	False	AATAAA	-17	NA	30848159	30837444	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30843377_30843634_30844315_30844355_30847036_30847150_30847967
WTC11_00078026	chr6	-	856	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	31	451	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	64.0364479547911	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	30848128	30839074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840016_30847036_30847150_30847967
WTC11_00078027	chr6	-	603	2	FSM	ENSG00000196260.5	ENST00000474914.1	625	2	17	5	17	4	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATAACTTGCTTGACTC	NA	False	NA	NA	False	AATAAA	-20	NA	30932092	30931357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30931575_30931706
WTC11_00078032	chr6	-	2280	3	FSM	ENSG00000204531.21	ENST00000513407.1	2276	3	0	-4	0	0	multi-exon	FALSE	canonical	3	5898	junction_2	534.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACACTTATCTTGGTTTG	-31165708	False	NA	-12	True	AATAAA	-23	NA	31167170	31164346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31164868_31165127_31165287_31165570
WTC11_00078034	chr6	-	1550	9	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1536	8	NA	NA	0	1	multi-exon	TRUE	canonical	3	45	junction_7	104.465230459708	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTCGCTGTGCTGA	-31357103	True	NA	-4	True	AATAAA	-22	NA	31357188	31268747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269037_31354158_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
WTC11_00078036	chr6	-	1885	2	Genic_Genomic	ENSG00000272221.1	novel	1207	1	NA	NA	-3281	11	multi-exon	FALSE	canonical	2	9	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATCTTAAAAATGTATT	NA	False	NA	-8	True	AATAAA	-30	NA	31398776	31394277	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_31395445_31398058
WTC11_00078037	chr6	-	2006	2	FSM	ENSG00000286940.1	ENST00000665353.1	2068	2	61	1	61	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTATGCCATGAGTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	31494874	31479973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31481359_31494253
WTC11_00078038	chr6	-	974	4	FSM	ENSG00000198563.14	ENST00000474961.5	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1791	junction_3	172.615822629973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31531445	False	NA	-2	True	ACTAAA	-32	NA	31531744	31530218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295
WTC11_00078039	chr6	-	1529	10	FSM	ENSG00000198563.14	ENST00000376177.6	1529	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	570.378042276446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31540458	False	NA	-2	True	ACTAAA	-32	NA	31540536	31530218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530950_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321
WTC11_00078040	chr6	-	2039	13	FSM	ENSG00000254870.5	ENST00000376185.5	2039	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	669.996621052839	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31546504	True	NA	-2	True	ACTAAA	-32	NA	31546582	31530218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949_31542149_31546108_31546210_31546477
WTC11_00078041	chr6	-	1624	11	NIC	ENSG00000198563.14	novel	2003	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	57	junction_8	602.402199531177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-31505189	True	NA	-9	True	ACTAAA	-25	NA	31541992	31530225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538940_31539146_31539275_31540321_31540535_31541949
WTC11_00078045	chr6	-	703	2	FSM	ENSG00000227507.3	ENST00000482429.1	1388	2	685	0	685	0	multi-exon	FALSE	canonical	1	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGAAATTGATTTTG	NA	False	NA	-71	True	NA	NA	NA	31581721	31580623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31581164_31581558
WTC11_00078046	chr6	-	3567	26	NNC	ENSG00000204463.14	novel	3843	26	NA	NA	-20	19660	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	99.5909554126277	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGGCGCGGTGGCTC	-31651471	False	NA	NA	False	AAAAAG	-1	NA	31652465	31619367	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31619398_31639029_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00078049	chr6	-	3582	25	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	56	junction_13	93.40008773491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	-31651329	False	NA	-2	True	AATAAA	-42	NA	31652323	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
WTC11_00078050	chr6	-	3728	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	101	junction_14	93.355355497154	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGTGTCCCTTAA	-31648863	True	NA	-2	True	AATAAA	-42	NA	31652358	31639016	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
WTC11_00078052	chr6	-	3427	24	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_20	99.7160998390318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTTCACAGTATTTAA	-31651471	False	NA	-71	True	NA	NA	NA	31652465	31639085	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00078054	chr6	-	1051	7	FSM	ENSG00000204463.14	ENST00000428326.5	1051	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	115.841006940068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAGAGATGGAGGGAAT	-31651159	False	NA	NA	False	NA	NA	NA	31652153	31647592	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31651901
WTC11_00078055	chr6	-	1704	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.5455437028192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31662711_31663852_31664578_31664840_31664907_31665572
WTC11_00078056	chr6	-	2060	5	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	84.8480259051441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31662711_31663852_31664581_31664840_31665004_31665089_31665347_31665573
WTC11_00078058	chr6	-	1946	20	NNC	ENSG00000204427.12	novel	1977	20	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	54.1468200021339	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTAATTGTATAACTT	NA	False	NA	-2	True	AATAAA	-19	NA	31703300	31686957	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31687296_31687497_31687545_31687645_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
WTC11_00078059	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	55.2984048616858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	NA	False	NA	-33	True	NA	NA	NA	31703340	31686988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
WTC11_00078061	chr6	-	724	6	FSM	ENSG00000213722.10	ENST00000437288.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.31642126858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31727935	False	NA	-6	True	AATAAA	-20	NA	31728877	31727037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727644_31728172_31728293_31728450_31728525_31728645_31728746_31728864
WTC11_00078063	chr6	-	2667	2	FSM	ENSG00000204390.10	ENST00000375654.5	2762	2	0	95	0	-95	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTACCTTGAAGGG	NA	False	NA	9	True	AGTAAA	-37	NA	31815283	31809713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31811986_31814888
WTC11_00078064	chr6	-	3359	3	FSM	ENSG00000204386.12	ENST00000495807.1	4616	3	0	1257	0	136	multi-exon	FALSE	canonical	3	291	junction_1	22.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTAGTTGGGACTACAGG	-31862768	False	NA	NA	False	NA	NA	NA	31862796	31858915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31862192_31862617
WTC11_00078066	chr6	-	2338	5	FSM	ENSG00000204386.12	ENST00000678869.1	2338	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	127.723333811798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGAATATTTGTAGAG	-31862856	False	NA	-41	True	AATGAA	-2	NA	31862884	31859216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31860179_31860438_31861451_31861998_31862192_31862617
WTC11_00078067	chr6	-	2580	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	5	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_9	3.04795013082563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTGTGACTCATTCT	-31878936	False	NA	-24	True	ATTAAA	-18	NA	31878997	31863196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
WTC11_00078069	chr6	-	1275	11	NIC	ENSG00000204356.14	novel	1445	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_5	219.661671668045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCTCAGCCTCTGG	-31950505	True	NA	-26	True	AGTAAA	-21	NA	31958956	31952226	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
WTC11_00078070	chr6	-	701	4	ISM	ENSG00000248290.1	ENST00000507684.1	2038	13	2859	-190	2859	190	3prime_fragment	FALSE	canonical	3	20	junction_3	3.74165738677394	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGGCATCGGTCCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	32009613	32008423	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_32008716_32009035_32009200_32009276_32009439_32009530
WTC11_00078072	chr6	-	1216	2	NNC	ENSG00000204315.4	novel	1342	2	NA	NA	-704	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	NA	False	NA	-12	True	ATTAAA	-20	NA	32130992	32128706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_32129855_32130924
WTC11_00078073	chr6	-	1852	4	FSM	ENSG00000204314.12	ENST00000211413.10	1892	4	40	0	24	0	multi-exon	FALSE	canonical	0	0	junction_3	4.78423336480244	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGCCCGCAATTCCAA	-32151879	False	NA	-12	True	ATTAAA	-14	NA	32151899	32148362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32149399_32149536_32149723_32150367_32150907_32151808
WTC11_00078074	chr6	-	493	3	FSM	ENSG00000284954.1	ENST00000494332.5	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACACCCTAGTGCCTCA	-32154319	False	NA	NA	False	NA	NA	NA	32154339	32153339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32153660_32153765_32153837_32154237
WTC11_00078076	chr6	-	1596	10	FSM	ENSG00000204305.16	ENST00000484849.5	1597	10	0	1	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.39775902288494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTCTGTGTGTG	-32184205	False	NA	-6	True	ATTAAA	-17	NA	32184246	32180968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32181240_32181350_32181478_32181605_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183323_32183389_32183554_32183751_32183880
WTC11_00078078	chr6	-	1320	6	FSM	ENSG00000204304.12	ENST00000478678.5	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	9.89141041510259	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAGAGTTGTGGTTCA	-32189918	False	NA	NA	False	NA	NA	NA	32189942	32186972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
WTC11_00078079	chr6	-	1188	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	41	0	41	0	multi-exon	FALSE	canonical	0	0	junction_1	6.59090282131363	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	NA	False	NA	-27	True	ATTAAA	-24	NA	32589807	32578768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
WTC11_00078080	chr6	-	1587	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-15	33	-8	-33	multi-exon	FALSE	canonical	0	0	junction_1	4.60298815988049	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAGCAATAAAAATACTAT	NA	False	NA	-35	True	AAGAAA	-6	NA	32666672	32659499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
WTC11_00078082	chr6	-	1735	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.2018517968975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
WTC11_00078085	chr6	-	1343	6	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	12.0233106921513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGACTCTGAGTCATTC	-33080672	True	NA	-5	True	AATAAA	-20	NA	33080751	33065011	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073711_33080679
WTC11_00078086	chr6	-	1375	2	FSM	ENSG00000231389.8	ENST00000437811.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTTTGTTTCTTCCA	NA	False	NA	NA	False	ATTAAA	-20	NA	33069248	33067659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33068805_33069018
WTC11_00078088	chr6	-	457	3	Antisense	novelGene_ENSG00000224557.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCATTCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	33124581	33118536	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_33118580_33119618_33119766_33124314
WTC11_00078089	chr6	-	2849	1	Genic_Genomic	ENSG00000237398.1	novel	NA	NA	NA	NA	-474	-9735	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTTCATCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	33143799	33140950	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_33141000_33143800
WTC11_00078090	chr6	-	3694	34	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	18417	12	3843	-11	3prime_fragment	FALSE	canonical	2	4	junction_29	4.01878052123646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCCAGGTGTCTG	NA	False	NA	-14	True	NA	NA	NA	33174050	33162705	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529_33172638_33173059_33173114_33173347_33173402_33173501_33173556_33173700_33173746_33173872_33173927_33174010
WTC11_00078091	chr6	-	756	6	FSM	ENSG00000204248.12	ENST00000682718.1	1380	6	0	624	0	-624	multi-exon	TRUE	canonical	0	0	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCTATGCCCCACCCT	NA	False	NA	NA	False	AAGAAA	-36	NA	33189368	33184991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33185055_33185700_33185779_33186626_33186819_33188361_33188525_33188977_33189189_33189319
WTC11_00078092	chr6	-	1142	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	52	0	52	0	multi-exon	FALSE	canonical	1	3	junction_2	5.24404424085076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	-33192075	False	NA	NA	False	AATAAA	-19	NA	33192402	33186444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
WTC11_00078095	chr6	-	2678	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_19	54.857963158357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-33271816	True	NA	-6	True	AATAAA	-18	NA	33271937	33250277	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271904
WTC11_00078097	chr6	-	2679	17	NIC	ENSG00000237441.10	novel	2687	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	64.6345495845682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33297273	False	710	-1	True	AATAAA	-23	NA	33297983	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297930
WTC11_00078098	chr6	-	3026	19	NIC	ENSG00000237441.10	novel	2896	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	85.055700703846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298232	True	NA	-1	True	AATAAA	-23	NA	33298942	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297213_33297344_33298454_33298652_33298869
WTC11_00078099	chr6	-	3226	19	NNC	ENSG00000237441.10	novel	2896	18	NA	NA	-481	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	82.3289285071523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	NA	False	NA	-1	True	AATAAA	-23	NA	33299423	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869_33299229_33299379
WTC11_00078100	chr6	-	3212	18	NNC	ENSG00000237441.10	novel	2896	18	NA	NA	-506	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	78.1745894519834	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	NA	False	NA	-1	True	AATAAA	-23	NA	33299448	33291653	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296217_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
WTC11_00078101	chr6	-	4874	9	Fusion	ENSG00000236104.3_ENSG00000231925.13	novel	1686	9	NA	NA	-3	413	multi-exon	FALSE	canonical	3	98	junction_8	77.9210337457095	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACATCTTATGGCATT	-33311997	False	5750	NA	False	TTTAAA	-2	NA	33317747	33301271	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004_33316986_33317652
WTC11_00078103	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	797.150776202344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33411880	True	NA	-18	True	AATAAA	-16	NA	33418142	33416549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
WTC11_00078104	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	761.892538354327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-33411808	True	NA	-87	True	NA	NA	NA	33418070	33416618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
WTC11_00078106	chr6	-	507	5	NNC	ENSG00000137288.10	novel	1284	4	NA	NA	0	46236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.83644049886	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATAATCATAACATTTG	-33699973	True	NA	NA	False	AAAAAG	-10	NA	33711700	33648056	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33648084_33697567_33697751_33700443_33700514_33701345_33701421_33711548
WTC11_00078108	chr6	-	3313	10	NNC	ENSG00000124493.14	novel	6670	10	NA	NA	1238	9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	50.2991053598372	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACATCCACTGAGGGTC	-34131753	True	NA	-6	True	AATAAA	-27	NA	34131783	34021844	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34131666
WTC11_00078110	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	4723.79693017174	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-34211711	True	NA	NA	False	NA	NA	NA	34426071	34284886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
WTC11_00078112	chr6	-	4238	4	FSM	ENSG00000196821.10	ENST00000374026.7	4232	4	0	-6	0	6	multi-exon	FALSE	canonical	2	3	junction_2	22.8619042659763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGTGTTGGTGAGTT	-34695765	True	NA	-9	True	ATTAAA	-28	NA	34696859	34587281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34590601_34606554_34606905_34654624_34654780_34696445
WTC11_00078114	chr6	-	2958	12	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	41.0087674560509	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495664	True	NA	-2	True	ATTAAA	-29	NA	35497063	35473596	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35480311_35480375_35484559_35484625_35486460_35486712_35496897
WTC11_00078115	chr6	-	2923	12	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	39.9751989229024	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495680	True	NA	-2	True	ATTAAA	-29	NA	35497079	35473596	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35484559_35484625_35486460_35486712_35496897
WTC11_00078116	chr6	-	2087	14	FSM	ENSG00000112041.13	ENST00000614066.4	2084	14	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.79888609045672	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGCGGTGGTTCCTCAG	-35512707	True	NA	-4	True	AATAAA	-18	NA	35512869	35497873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35498461_35499980_35500153_35503558_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
WTC11_00078117	chr6	-	688	2	FSM	ENSG00000289456.1	ENST00000688067.1	719	2	7	24	7	-24	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTACCAGATGTGCA	-35566793	True	NA	-28	True	AATAAA	-21	NA	35566945	35563158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35563515_35566613
WTC11_00078118	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	211.040912305332	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35908061	True	NA	-9	True	AATAAA	-20	NA	35921147	35833033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
WTC11_00078121	chr6	-	1590	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	15	0	-14	multi-exon	TRUE	canonical	1	1	junction_5	2.43276948084663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGTAGCTGATGTTT	-36387615	False	NA	-17	True	AATAAA	-1	NA	36387669	36366208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
WTC11_00078122	chr6	-	1332	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	88	14	-43	-14	multi-exon	FALSE	canonical	1	2	junction_5	2.03960780543711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGTAGCTGATGTTT	-36387658	False	NA	-17	True	AATAAA	-1	NA	36387712	36366208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
WTC11_00078123	chr6	-	4604	4	ISM	ENSG00000112079.9	ENST00000229812.8	3585	14	46727	0	46727	0	intron_retention	FALSE	canonical	3	100	junction_1	22.0655588845805	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-36500713	False	NA	-10	True	AATAAA	-14	NA	36500752	36493891	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362
WTC11_00078125	chr6	-	1122	1	FSM	ENSG00000285244.1	ENST00000643333.1	951	1	135	-306	135	306	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTTTCTCCTCTGCT	-36678394	False	NA	NA	False	NA	NA	NA	36678424	36677302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36677300_36678400
WTC11_00078126	chr6	-	1914	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	66827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	939.23522376216	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAATAATAATAATAAT	-36966230	True	NA	NA	False	NA	NA	NA	36986125	36901313	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36901346_36968142_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
WTC11_00078127	chr6	-	478	4	FSM	ENSG00000112139.17	ENST00000418178.2	478	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGCGGTCCCGGAACA	-37646363	False	NA	NA	False	NA	NA	NA	37646374	37638654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_37638668_37643808_37643944_37644496_37644650_37646197
WTC11_00078128	chr6	-	3856	6	NNC	ENSG00000164626.9	novel	3783	5	NA	NA	-48	34102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.6628633890556	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATTTAAAAATAGTAAG	-39225258	True	NA	NA	False	NA	NA	NA	39229523	39154868	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_39154896_39188972_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
WTC11_00078129	chr6	-	3186	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-14	-34	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	34.4956608471841	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTGGCAAATATTAAAC	-39931900	True	NA	NA	False	NA	NA	NA	39934476	39905092	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
WTC11_00078133	chr6	-	352	2	FSM	ENSG00000112561.19	ENST00000494822.1	524	2	172	0	172	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGTTTCTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	41688028	41687093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41687170_41687752
WTC11_00078134	chr6	-	8940	8	FSM	ENSG00000164663.15	ENST00000682992.1	8940	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.77010277566647	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTGTGCGGTATTT	-41894989	True	NA	NA	False	AATAAA	-6	NA	41895375	41789895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41796724_41798723_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
WTC11_00078135	chr6	-	6172	10	FSM	ENSG00000288721.1	ENST00000684631.1	6172	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	161.974239683314	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCCTGGCGACAGAG	-41917405	True	NA	NA	False	NA	NA	NA	41921107	41793313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41796724_41798723_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41907015_41907288_41909268_41909523_41916784_41916940_41921004
WTC11_00078136	chr6	-	2027	1	FSM	ENSG00000261068.2	ENST00000562471.2	2027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGCTAGAGGTGAGTGT	-42094244	False	NA	-2	True	AATAAA	-21	NA	42094259	42092232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42092200_42094300
WTC11_00078137	chr6	-	9195	5	FSM	ENSG00000188112.9	ENST00000341865.9	6385	5	1	-2811	0	2811	multi-exon	FALSE	canonical	1	4	junction_3	27.3986769753578	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAAGCACTGTGTAA	-42137256	True	NA	-4	True	AATACA	-19	NA	42142619	42098307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42103879_42104462_42107584_42110215_42110292_42128671_42128779_42142299
WTC11_00078138	chr6	-	7649	18	FSM	ENSG00000124496.12	ENST00000541110.5	7646	18	-8	5	-8	-5	multi-exon	FALSE	canonical	1	3	junction_17	32.7720448006411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCGTTTGGCTTAAATA	-42451966	True	NA	-15	True	AATAAA	-15	NA	42452059	42224935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
WTC11_00078139	chr6	-	7854	17	ISM	ENSG00000124496.12	ENST00000541110.5	7646	18	544	7	-246	-7	3prime_fragment	FALSE	canonical	3	47	junction_10	24.8994854364503	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTCGTTTGGCTTAAA	-42449842	True	NA	-17	True	AATAAA	-13	NA	42451507	42224937	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176
WTC11_00078140	chr6	-	6823	18	NNC	ENSG00000124496.12	novel	7286	18	NA	NA	-291	-472	intron_retention	FALSE	canonical	2	8	junction_17	33.7085000523391	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTTGTGATTGCTTCC	-42449887	True	NA	-2	True	AATAAA	-19	NA	42451552	42225696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42451518
WTC11_00078141	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	37	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	-42929367	False	NA	NA	False	AATAAA	-27	NA	42929457	42928286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42928647_42929164
WTC11_00078142	chr6	-	3446	17	FSM	ENSG00000124587.14	ENST00000304611.13	3444	17	0	-2	0	2	multi-exon	FALSE	canonical	2	5	junction_12	2.92016159655592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATATTGTTTACCCTTCCG	-42978709	True	NA	1	True	AATAAA	-28	NA	42979181	42963862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974002_42974087_42974874_42975039_42978268
WTC11_00078143	chr6	-	509	1	FSM	ENSG00000272223.1	ENST00000607790.1	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGCTGAAGCTCAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	43034405	43033896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43033900_43034400
WTC11_00078144	chr6	-	5314	26	FSM	ENSG00000044090.13	ENST00000690231.1	5354	26	54	-14	3	0	multi-exon	TRUE	canonical	2	24	junction_25	22.4374686629308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGTGTGTTTGGCGAC	-43053766	False	5527	NA	False	AATAAA	-20	NA	43053848	43037616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053710
WTC11_00078145	chr6	-	2552	5	FSM	ENSG00000044090.13	ENST00000683493.1	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	15.644487847162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTCCTGTTTTCAGATG	-43053572	False	NA	-20	True	AATAAA	-7	NA	43053654	43049120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
WTC11_00078146	chr6	-	689	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCAACATG	-43053911	True	NA	NA	False	NA	NA	NA	43059438	43057697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43058234_43059285
WTC11_00078147	chr6	-	759	1	FSM	ENSG00000272170.1	ENST00000606123.1	409	1	-351	1	-351	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGGATTATTTAATACTT	-43074958	False	NA	0	True	ATTAAA	-22	NA	43075090	43074331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43074300_43075100
WTC11_00078148	chr6	-	1191	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	83.1099591271855	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305338	True	NA	-14	True	AATAAA	-14	NA	43308823	43305471	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308111_43308410_43308749
WTC11_00078149	chr6	-	1128	6	FSM	ENSG00000171462.15	ENST00000372488.8	1548	6	-3	423	-3	-421	multi-exon	FALSE	canonical	2	2	junction_1	1.26491106406735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGGCCCTGGTGGTG	-43455533	True	NA	NA	False	NA	NA	NA	43455551	43450774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43451275_43451939_43452085_43453004_43453136_43454410_43454475_43454749_43454881_43455394
WTC11_00078154	chr6	-	1610	12	FSM	ENSG00000196284.17	ENST00000475057.5	1377	12	19	-252	0	252	multi-exon	FALSE	canonical	2	8	junction_1	29.8738394082805	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATATTTTATGTCTCC	-45376245	True	NA	76	True	ACTAAA	-10	NA	45377934	44809064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44809502_44829763_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
WTC11_00078155	chr6	-	1479	11	NIC	ENSG00000146070.17	novel	1915	12	NA	NA	-49	-226	combination_of_known_splicesites	FALSE	canonical	3	17	junction_10	9.55196314900764	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCTTGTTTCAAAAC	-46735046	True	NA	-19	True	ATTAAA	-11	NA	46735424	46704542	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46735179
WTC11_00078156	chr6	-	408	1	FSM	ENSG00000060303.5	ENST00000498293.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCTGCAATGCTGTA	NA	False	NA	NA	False	NA	NA	NA	50857662	50857254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_50857300_50857700
WTC11_00078157	chr6	-	999	7	FSM	ENSG00000244067.3	ENST00000493422.3	1221	7	0	222	0	-222	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGTGGTTTGTTTGAC	NA	False	NA	NA	False	AGTAAA	-14	NA	52763475	52750308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52750700_52751576_52751709_52752853_52752996_52754942_52755076_52756257_52756310_52757860_52757978_52763443
WTC11_00078158	chr6	-	1405	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_6	54.5374489074556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTGTGAGAATTT	-52993389	True	NA	-3	True	AATAAA	-22	NA	52995304	52977947	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
WTC11_00078160	chr6	-	3771	7	FSM	ENSG00000112175.8	ENST00000370830.4	3970	7	199	0	199	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAATTAAAGATTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	55875391	55753652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_55755683_55759004_55759116_55760456_55760534_55774048_55774244_55794278_55794428_55819654_55819848_55874375
WTC11_00078161	chr6	-	4108	29	NIC	ENSG00000124749.17	novel	4173	30	NA	NA	60	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_16	7.99776754565208	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-56247117	True	NA	NA	False	AATAAA	-18	NA	56247520	56056589	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56166901_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
WTC11_00078162	chr6	-	4151	29	NNC	ENSG00000124749.17	novel	4173	30	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	6.32082321556686	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-56247160	True	NA	NA	False	AATAAA	-18	NA	56247563	56056589	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124291_56125564_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56166901_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
WTC11_00078164	chr6	-	18030	94	FSM	ENSG00000151914.22	ENST00000421834.6	18030	94	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_60	80.4478374455083	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTGATTATTTAAAGT	-56840768	True	NA	NA	False	AATAAA	-23	NA	56843665	56457988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56468981_56469000_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56552183_56553656_56555344_56555841_56557318_56557519_56560293_56560424_56561307_56561550_56562137_56562201_56568468_56568596_56569855_56570013_56572099_56572267_56572746_56573065_56573678_56573888_56578813_56578938_56592181_56592359_56593662_56594194_56597739_56598007_56598475_56598710_56600068_56600222_56610426_56610563_56611507_56611597_56614355_56614485_56624529_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
WTC11_00078165	chr6	-	17737	95	FSM	ENSG00000151914.22	ENST00000312431.10	17756	95	19	0	4	0	multi-exon	FALSE	canonical	0	0	junction_60	80.5306669567998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTGATTATTTAAAGT	-56850768	True	NA	NA	False	AATAAA	-23	NA	56851897	56457988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56468981_56469000_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56552183_56553656_56555344_56555841_56557318_56557519_56560293_56560424_56561307_56561550_56562137_56562201_56568468_56568596_56569855_56570013_56572099_56572267_56572746_56573065_56573678_56573888_56578813_56578938_56592181_56592359_56593662_56594194_56597739_56598007_56598475_56598710_56600068_56600222_56610426_56610563_56611507_56611597_56614355_56614485_56624529_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56851396_56851605_56851787
WTC11_00078166	chr6	-	1381	1	FSM	ENSG00000266680.1	ENST00000584934.1	1404	1	-4	27	-4	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAATAAATGATTTAAAA	-63572193	False	NA	NA	False	ATTAAA	-39	NA	63572412	63571031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_63571000_63572400
WTC11_00078167	chr6	-	250	1	FSM	ENSG00000213309.3	ENST00000439124.1	535	1	203	82	203	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTAAAAAGAAGGATATCA	NA	False	NA	NA	False	NA	NA	NA	63616158	63615908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_63615900_63616200
WTC11_00078168	chr6	-	280	1	FSM	ENSG00000230910.5	ENST00000691447.1	2324	1	1957	87	1843	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCTCTCTGTCCTTT	-68633010	False	NA	NA	False	AAAAAG	-19	NA	68633029	68632749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_68632700_68633000
WTC11_00078170	chr6	-	4242	26	FSM	ENSG00000112280.18	ENST00000683602.1	4339	26	118	-21	118	0	multi-exon	FALSE	canonical	3	59	junction_14	8.77049599509628	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70272851	False	NA	-10	True	ATTAAA	-14	NA	70273772	70216039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064
WTC11_00078171	chr6	-	6408	4	FSM	ENSG00000112309.11	ENST00000230053.11	6587	4	0	179	0	-179	multi-exon	FALSE	canonical	2	15	junction_1	4.24264068711928	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGACAAACACCAAAATAA	-70957022	True	NA	NA	False	NA	NA	NA	70957060	70856857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70861750_70861829_70861979_70894127_70894273_70955838
WTC11_00078172	chr6	-	3503	8	FSM	ENSG00000156508.19	ENST00000610520.5	3503	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7983.23340712603	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGGCATTTCTTTT	-73503429	True	NA	-4	True	AATAAA	-18	NA	73521032	73515749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519891_73520057_73520999
WTC11_00078173	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	7801.33535926735	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520840	False	NA	-1	True	ATTAAA	-17	NA	73520985	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
WTC11_00078174	chr6	-	1857	8	FSM	ENSG00000156508.19	ENST00000356303.7	1883	8	26	0	26	0	multi-exon	FALSE	canonical	0	0	junction_7	7803.65917570804	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521729	False	NA	-1	True	ATTAAA	-17	NA	73521874	73517514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521731
WTC11_00078175	chr6	-	1823	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	7803.65917570804	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73523692	True	NA	-5	True	ATTAAA	-13	NA	73523837	73517518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
WTC11_00078176	chr6	-	1732	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7983.23340712603	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	-73503429	True	NA	-7	True	ATTAAA	-11	NA	73521032	73517520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
WTC11_00078178	chr6	-	2099	5	FSM	ENSG00000156508.19	ENST00000677062.1	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	17585	junction_4	1182.24011414771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAGGCCAAATAAGCGC	-73520847	False	NA	-85	True	NA	NA	NA	73520992	73518249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882
WTC11_00078179	chr6	-	3107	10	NIC	ENSG00000119899.13	novel	3292	11	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.8291430949295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-73652868	True	NA	-12	True	AATAAA	-15	NA	73653955	73593378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_73595215_73600350_73600442_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
WTC11_00078180	chr6	-	1055	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	7	12553	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	28.4004107951511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACAGGACCTTCCAAT	-73652898	True	NA	-10	True	AATAAA	-22	NA	73653985	73622679	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
WTC11_00078181	chr6	-	4410	8	NNC	ENSG00000112697.17	novel	4658	8	NA	NA	0	26048	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	280.167734016024	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATGTAACCAGTACTAT	-75272618	True	NA	NA	False	NA	NA	NA	75284763	75226875	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_75226898_75252924_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
WTC11_00078183	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	-75334655	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75308898_75312396_75315203_75334642
WTC11_00078184	chr6	-	4809	1	FSM	ENSG00000135312.7	ENST00000369947.5	2568	1	-482	-1759	-482	1759	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCGGGTAGTAGTTCTAT	-77463905	False	NA	-2	True	AATAAA	-26	NA	77463973	77459164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_77459200_77464000
WTC11_00078185	chr6	-	667	2	Antisense	novelGene_ENSG00000269964.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTATAGGACACCTCT	NA	False	NA	NA	False	NA	NA	NA	77665888	77663396	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_77664027_77665851
WTC11_00078186	chr6	-	886	6	NNC	ENSG00000118418.14	novel	831	6	NA	NA	19522	373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1898.06876587757	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCCACTTTTGAAAT	NA	False	NA	NA	False	CATAAA	-18	NA	79215167	79200871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200929_79201247_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971
WTC11_00078188	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.16986271980755	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	-79536482	True	NA	NA	False	AATAAA	-14	NA	79537430	79484990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
WTC11_00078192	chr6	-	2893	12	FSM	ENSG00000135317.14	ENST00000682926.1	3220	12	66	261	66	-173	multi-exon	FALSE	canonical	3	202	junction_9	39.3465215785408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAAAAGATTATTTT	-85534736	False	NA	NA	False	AAGAAA	-30	NA	85534749	85505255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598
WTC11_00078193	chr6	-	2769	13	FSM	ENSG00000135317.14	ENST00000514801.2	3030	13	0	261	0	-173	multi-exon	FALSE	canonical	3	202	junction_9	38.5623593100261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAAAAGATTATTTT	NA	False	NA	NA	False	AAGAAA	-30	NA	85537616	85505255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791
WTC11_00078196	chr6	-	3566	28	FSM	ENSG00000135317.14	ENST00000682682.1	3739	28	0	173	0	-173	multi-exon	FALSE	canonical	2	12	junction_4	54.2296088876708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAAAAGATTATTTT	-85593882	False	NA	NA	False	AAGAAA	-30	NA	85593897	85505255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00078197	chr6	-	3759	29	FSM	ENSG00000135317.14	ENST00000683481.1	4020	29	0	261	0	-173	multi-exon	FALSE	canonical	1	1	junction_17	57.6289481360306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTAAAAGATTATTTT	-85593882	False	NA	NA	False	AAGAAA	-30	NA	85593897	85505255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547083_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00078198	chr6	-	4102	27	FSM	ENSG00000135317.14	ENST00000683785.1	4130	27	0	28	0	-28	multi-exon	TRUE	canonical	3	46	junction_25	62.748877261933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATTTTGAATGTTATT	-85593936	False	NA	NA	False	TTTAAA	-4	NA	85593951	85504803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572372_85574257_85574379_85593578
WTC11_00078201	chr6	-	2704	4	FSM	ENSG00000203875.13	ENST00000670094.1	2704	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	3092.06284972778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACAGACCAGGCTAA	-85678922	False	NA	NA	False	NA	NA	NA	85678932	85675432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677953_85678033_85678135
WTC11_00078202	chr6	-	1431	6	FSM	ENSG00000203875.13	ENST00000660318.1	1095	6	12	-348	0	0	multi-exon	FALSE	canonical	3	395	junction_3	2552.24351502751	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGAAGGATTCTTGAAA	-85586093	True	NA	2	True	AATAAA	-44	NA	85678736	85676078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677869_85677953_85678033_85678135_85678189_85678693
WTC11_00078203	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	2713.18636293197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
WTC11_00078212	chr6	-	4392	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	15	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	25.6259898935571	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTGTCTGTGTTGGG	-97280950	True	NA	2	True	AATAAA	-21	NA	97283161	97258656	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97261975_97263334_97263449_97267881_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
WTC11_00078214	chr6	-	4755	12	NIC	ENSG00000132424.17	novel	5113	12	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	3	73	junction_3	208.445049936369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGATTTGTTTCAGGC	-99412896	True	NA	-57	True	AATAAA	-21	NA	99425290	99398103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00078215	chr6	-	2948	13	NNC	ENSG00000132424.17	novel	2862	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_2	214.199802884026	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-99412898	True	NA	-12	True	AATAAA	-25	NA	99425292	99399963	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99400312_99400543_99401628_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
WTC11_00078219	chr6	-	3848	14	NIC	ENSG00000123552.18	novel	1741	14	NA	NA	12	1667	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	40.6647427358781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTTGTGCCTCTCA	-99515338	False	NA	1	True	TATAAA	-24	NA	99515364	99460796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
WTC11_00078220	chr6	-	4284	12	FSM	ENSG00000112237.13	ENST00000369220.8	2118	12	0	-2166	0	2166	multi-exon	FALSE	canonical	2	26	junction_4	372.501971817955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTGAACACTTATT	-99558743	True	NA	NA	False	NA	NA	NA	99568628	99540220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549573_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00078224	chr6	-	846	4	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	36.7090663944965	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTATCTGTTA	-107458551	True	NA	-2	True	AATAAA	-17	NA	107459550	107264183	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_107264513_107274028_107274228_107334197_107334333_107459367
WTC11_00078227	chr6	-	1292	1	FSM	ENSG00000225093.1	ENST00000417878.1	1212	1	-14	-66	-14	66	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGTGGCTGTGTCTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	108005582	108004290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108004300_108005600
WTC11_00078229	chr6	-	1537	5	FSM	ENSG00000112335.15	ENST00000368979.6	1537	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	469.793571688673	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	NA	False	NA	-4	True	AATAAA	-26	NA	108261246	108211512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108222233_108222321_108222949_108223046_108260759
WTC11_00078235	chr6	-	5322	6	NIC	ENSG00000112365.5	novel	5501	7	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_4	42.8177533273291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	-109479899	True	NA	NA	False	ATTAAA	-22	NA	109483208	109462593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109481074_109482055_109483097
WTC11_00078237	chr6	-	6398	13	FSM	ENSG00000155111.15	ENST00000368911.8	6399	13	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_3	2.56444709223819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTGGATTTTTTAA	-110814738	True	NA	-1	True	AATAAA	-16	NA	110815468	110609977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110614667_110621103_110621371_110622087_110622167_110622814_110622913_110623289_110623363_110626775_110626846_110627001_110627146_110632029_110632162_110638648_110638707_110667433_110667575_110670430_110670542_110746125_110746202_110815008
WTC11_00078238	chr6	-	10706	32	FSM	ENSG00000009413.16	ENST00000368802.8	10706	32	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_27	4.85588350133773	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTGTGACTTCATCTT	-111482838	True	NA	NA	False	AATAAA	-14	NA	111483218	111299032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111300157_111307360_111307571_111309852_111310100_111311068_111311260_111313351_111313490_111315266_111315382_111322568_111322679_111329531_111329739_111331675_111331785_111333122_111333368_111335468_111335611_111343924_111344044_111349217_111349337_111351675_111351792_111357013_111357126_111358821_111359015_111363852_111363979_111365264_111365345_111367114_111368029_111372595_111376758_111377700_111377844_111379981_111380220_111381324_111381445_111387764_111387914_111388000_111388086_111389105_111389211_111390085_111390181_111392875_111392973_111405469_111405631_111411479_111411555_111416282_111416473_111482749
WTC11_00078239	chr6	-	3574	13	NIC	ENSG00000010810.17	novel	3628	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	71	junction_12	63.1552320345142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-111872107	True	NA	2	True	ATTAAA	-23	NA	111873439	111660331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
WTC11_00078240	chr6	-	2558	13	NIC	ENSG00000010810.17	novel	3234	14	NA	NA	44	0	intron_retention	FALSE	canonical	3	71	junction_12	70.4211537031941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCAGGACAGGTGTTTG	-111872054	False	NA	-9	True	AATAAA	-26	NA	111873386	111661285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
WTC11_00078247	chr6	-	2956	2	NNC	ENSG00000249853.9	novel	3869	5	NA	NA	-804	-172866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTTGAGAAAAATATTTT	-114343807	False	NA	NA	False	AATAAA	-17	NA	114343827	114340342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_114341666_114342194
WTC11_00078248	chr6	-	2526	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-45	2	multi-exon	FALSE	canonical	3	48	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTCTAGGTTAATT	-116251433	True	NA	-1	True	AATAAA	-17	NA	116254120	116249961	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_116250419_116252051
WTC11_00078250	chr6	-	1902	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	40.879225911349	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666731	True	NA	-1	True	AATAAA	-22	NA	116668796	116635617	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
WTC11_00078251	chr6	-	2546	8	ISM	ENSG00000111877.18	ENST00000619706.5	5219	14	75	97142	30	0	5prime_fragment	FALSE	canonical	3	40	junction_6	9.37212540963242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	-118933984	True	NA	-1	True	AATAAA	-17	NA	118935084	118910596	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
WTC11_00078252	chr6	-	2517	2	FSM	ENSG00000111879.20	ENST00000482219.6	2515	2	0	-2	0	1	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTATTTTTTTCTA	NA	False	NA	1	True	AATAAA	-19	NA	118963920	118959827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118960185_118961760
WTC11_00078254	chr6	-	2150	6	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-17	51348	0	0	5prime_fragment	FALSE	canonical	3	44	junction_5	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	-119077778	True	NA	NA	False	AATAAA	-20	NA	119078664	119011176	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
WTC11_00078255	chr6	-	5022	13	NNC	ENSG00000111885.7	novel	5018	13	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_12	12.1732288239399	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTATATTTTTCT	-119348566	True	NA	NA	False	AATAAA	-18	NA	119349745	119177204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349521
WTC11_00078256	chr6	-	301	2	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCATCCTGGCTCAA	-121625770	True	NA	NA	False	NA	NA	NA	121625793	121620667	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_121620880_121625704
WTC11_00078259	chr6	-	4684	9	NNC	ENSG00000186439.14	novel	4649	21	NA	NA	49215	1152	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	89.7356360371954	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	-123583204	True	NA	1	True	AATAAA	-28	NA	123587694	123497036	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123500714_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
WTC11_00078260	chr6	-	2620	9	NNC	ENSG00000186439.14	novel	4649	21	NA	NA	49211	1152	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	82.6232980157534	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	-123583208	True	NA	1	True	AATAAA	-28	NA	123587698	123497036	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123498646_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
WTC11_00078262	chr6	-	2030	7	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49201	588	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	115.439257716871	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTATTTCTACTTTGTC	-123583218	True	NA	NA	False	ATTAAA	-27	NA	123587708	123528092	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123529294_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123580483_123580601_123587458
WTC11_00078263	chr6	-	1029	3	NNC	ENSG00000186439.14	novel	4627	41	NA	NA	49215	-40837	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	146	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCCAGTCTTAAGTATT	-123583204	True	NA	NA	False	ATTAAA	-17	NA	123587694	123569550	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123570134_123570922_123571133_123587458
WTC11_00078265	chr6	-	3694	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-125702452	True	NA	NA	False	AATAAA	-24	NA	125707408	125701881	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125705333_125707165
WTC11_00078277	chr6	-	3736	8	ISM	ENSG00000112282.18	ENST00000368068.8	5247	29	30586	33	-1135	-16	intron_retention	FALSE	canonical	2	125	junction_5	28.2633389133452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAATGAATAAACCGTGT	-131597646	False	NA	-37	True	AGTAAA	-5	NA	131597656	131586764	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946
WTC11_00078285	chr6	-	2434	15	FSM	ENSG00000146409.12	ENST00000650136.1	2421	15	0	-13	0	0	multi-exon	FALSE	canonical	1	2	junction_4	107.483458622948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794535	False	NA	-2	True	AATAAA	-21	NA	132798495	132769369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772250_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
WTC11_00078286	chr6	-	2527	15	NIC	ENSG00000146409.12	novel	2421	15	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	88.7069527680201	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCTTCTTGGTCTATTT	-132794674	True	NA	-5	True	AATAAA	-18	NA	132798634	132769372	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
WTC11_00078291	chr6	-	3492	22	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	0	6888	0	-350	5prime_fragment	FALSE	canonical	3	33	junction_20	12.4323110593584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACACTTGACAAATTATA	-135495797	True	NA	NA	False	AATAAA	-18	NA	135497745	135394671	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
WTC11_00078303	chr6	-	10958	10	FSM	ENSG00000010818.10	ENST00000367604.6	10032	10	-917	-9	-917	0	multi-exon	FALSE	canonical	0	0	junction_9	12.9871731591854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTAGTTCTTATGT	-142947261	False	NA	NA	False	AATAAA	-18	NA	142947282	142751468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_142753932_142759771_142760668_142761463_142761566_142764798_142764975_142768381_142768537_142769551_142775126_142776146_142776192_142783520_142783616_142836934_142837048_142945943
WTC11_00078306	chr6	-	2679	3	FSM	ENSG00000112425.16	ENST00000638262.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGATACAAAGATCTTT	-145735288	True	NA	45	True	AAGAAA	-16	NA	145735498	145625490	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145627694_145686121_145686297_145735197
WTC11_00078308	chr6	-	4119	9	NNC	ENSG00000120253.14	novel	3831	8	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	116.067598837919	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATTTGCTTCTATCTG	-149735808	True	NA	-7	True	AATAAA	-20	NA	149746545	149724320	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_149727199_149729240_149729519_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
WTC11_00078310	chr6	-	3162	4	FSM	ENSG00000120256.11	ENST00000367368.3	3158	4	0	-4	0	4	multi-exon	FALSE	canonical	1	2	junction_1	56.3461523876199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGTGTGAATCATT	-149864003	False	606	2	True	AATAAA	-19	NA	149864026	149840433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149842677_149842982_149843125_149853002_149853161_149863407
WTC11_00078312	chr6	-	3212	2	NIC	ENSG00000181472.5	novel	3103	3	NA	NA	-296	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGATGTCATGTCATCT	-151391834	False	NA	-11	True	AATAAA	-17	NA	151391855	151364116	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_151366893_151391419
WTC11_00078314	chr6	-	906	5	FSM	ENSG00000155906.20	ENST00000683740.1	1229	5	0	323	0	-323	multi-exon	FALSE	canonical	3	141	junction_1	11.7765657133139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTTTTGTGAGAATGA	-151448743	True	NA	NA	False	AATAAA	-18	NA	151452146	151430105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
WTC11_00078332	chr6	-	7717	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	-12	0	0	multi-exon	FALSE	canonical	1	2	junction_6	30.5934500126002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	-161270497	True	NA	4	True	AATAAA	-28	NA	161274025	161129966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
WTC11_00078340	chr6	-	9496	15	NNC	ENSG00000184465.16	novel	2554	16	NA	NA	0	4401	intron_retention	FALSE	canonical	3	16	junction_6	52.0967016857172	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGTGCAATGTAAAAAAG	-169697027	True	NA	NA	False	NA	NA	NA	169702029	169653357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169663562_169663650_169663840_169663879_169664165_169664287_169665485_169665557_169667135_169667188_169667981_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
WTC11_00078341	chr6	-	2035	12	NIC	ENSG00000184465.16	novel	2176	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	55.2437124802003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	-169697034	True	NA	-7	True	AATAAA	-20	NA	169702036	169657761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664287_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
WTC11_00078342	chr6	-	2368	15	NIC	ENSG00000184465.16	novel	2554	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	56.015121865002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	-169697040	True	NA	-7	True	AATAAA	-20	NA	169702042	169657761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664287_169665485_169665557_169667135_169667188_169667981_169668186_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
WTC11_00078343	chr6	-	1060	3	ISM	ENSG00000130024.15	ENST00000366780.8	1589	12	17632	-3	12999	0	3prime_fragment	FALSE	canonical	3	135	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAAAATCTGCAGTT	NA	False	NA	-8	True	AATAAA	-20	NA	169706299	169703901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_169704089_169705132_169705322_169705615
WTC11_00078344	chr6	-	4315	9	ISM	ENSG00000130024.15	ENST00000366780.8	1589	12	0	3123	0	0	5prime_fragment	FALSE	canonical	3	48	junction_6	45.4970809503203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	-169723916	False	NA	0	True	AATAAA	-23	NA	169723931	169707027	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
WTC11_00078350	chr6	-	1157	4	FSM	ENSG00000071994.11	ENST00000544336.5	1164	4	7	0	7	0	multi-exon	FALSE	canonical	3	60	junction_3	292.22936197446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGCTTTTATTTTGA	-170565554	True	NA	-19	True	AATAAA	-14	NA	170584685	170581746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170582266_170583056_170583189_170583504_170583624_170584298
WTC11_00078352	chr6	+	358	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCACAATTCAAATTCAA	NA	False	NA	NA	False	NA	NA	NA	8012297	8012655	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_8012300_8012700
WTC11_00078354	chr6	+	234	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGTCGTCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	16890668	16890902	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_16890700_16890900
WTC11_00078355	chr6	+	419	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGCATTCCGAGGACA	NA	False	NA	NA	False	AATAAA	-37	NA	21362190	21362609	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21362200_21362600
WTC11_00078356	chr6	+	1520	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTCTTGGTCGTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	26722693	26724213	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26722700_26724200
WTC11_00078357	chr6	+	1532	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCGCTAGGGTCTCGGG	NA	False	NA	NA	False	NA	NA	NA	26777472	26779004	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26777500_26779000
WTC11_00078358	chr6	+	297	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAGAAAGTGGTA	NA	False	NA	NA	False	NA	NA	NA	27208644	27208941	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27208600_27208900
WTC11_00078360	chr6	+	654	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCCACATTCAAAGGGA	NA	False	NA	NA	False	ACTAAA	-13	NA	39183912	39184566	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_39183900_39184600
WTC11_00078361	chr6	+	10750	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAATGAATGAAGAAG	NA	False	NA	NA	False	AAAACA	-44	NA	48071457	48082207	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_48071500_48082200
WTC11_00078362	chr6	+	273	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAGTGACTCCTTGAG	NA	False	NA	NA	False	AAAAAG	-36	NA	65304983	65305256	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_65305000_65305300
WTC11_00078363	chr6	+	757	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGATTGGGATGATTC	NA	False	NA	NA	False	AAGAAA	-25	NA	65305565	65306322	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_65305600_65306300
WTC11_00078364	chr6	+	318	1	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGGCAAAACAATTTGG	NA	False	NA	NA	False	NA	NA	NA	77662796	77663114	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_77662800_77663100
WTC11_00078365	chr6	+	249	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGCACACCTTGAAGG	NA	False	NA	NA	False	NA	NA	NA	81348483	81348732	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_81348500_81348700
WTC11_00078373	chr6	+	3258	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	122842275	122845533	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122842300_122845500
WTC11_00078382	chr6	+	441	4	FSM	ENSG00000250903.10	ENST00000533653.5	568	4	-87	214	1	-214	multi-exon	FALSE	canonical	1	3	junction_2	7.58653778449403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGCCACCACTCCCAA	2245396	True	NA	NA	False	NA	NA	NA	2245765	2269799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697
WTC11_00078383	chr6	+	4461	5	FSM	ENSG00000250903.10	ENST00000607519.2	3792	5	-11	-658	1	-13	multi-exon	FALSE	canonical	0	0	junction_2	8.24621125123532	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAAATTAAAATTTGTA	2245396	True	NA	NA	False	CATAAA	-9	NA	2245765	2484665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2398576_2398779_2398865_2399038_2480833
WTC11_00078384	chr6	+	653	1	FSM	ENSG00000272465.1	ENST00000606542.1	701	1	-92	140	-92	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGGTAAGGGTCTAGG	NA	False	NA	NA	False	NA	NA	NA	2437456	2438109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2437500_2438100
WTC11_00078388	chr6	+	4466	21	NIC	ENSG00000112739.17	novel	2364	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_12	121.753552309573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010677	True	NA	6	True	AATAAA	-19	NA	4021299	4064983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4056526_4056689_4057035_4057188_4058727_4058815_4060412_4060687_4061014_4061148_4061654_4062300_4062556_4062634_4063073_4063120_4064800
WTC11_00078391	chr6	+	843	1	FSM	ENSG00000285278.1	ENST00000645232.1	3427	1	210	2374	210	-2374	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTATTGCTGGACTCA	10404647	False	NA	NA	False	NA	NA	NA	10404711	10405554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10404700_10405600
WTC11_00078392	chr6	+	1131	5	FSM	ENSG00000111846.20	ENST00000397423.7	1108	5	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.637619007696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTAGATAATACTGT	NA	False	NA	NA	False	AGTAAA	-5	NA	10521308	10626947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10521418_10527473_10527661_10528630_10528842_10621350_10621444_10626416
WTC11_00078393	chr6	+	648	1	FSM	ENSG00000205318.5	ENST00000379591.4	934	1	235	51	235	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTCCAGATAAACATTT	10633985	False	NA	NA	False	AATAAA	-37	NA	10633996	10634644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10634000_10634600
WTC11_00078394	chr6	+	907	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	-19	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_2	347.891506076248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	10738049	True	NA	NA	False	AATAAA	-8	NA	10747739	10756971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
WTC11_00078395	chr6	+	2220	5	FSM	ENSG00000137210.14	ENST00000475942.5	992	5	-65	-1163	-19	0	multi-exon	FALSE	canonical	3	747	junction_4	100.924167076077	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	10738049	True	NA	NA	False	AATAAA	-10	NA	10747739	10756973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141
WTC11_00078396	chr6	+	6946	4	FSM	ENSG00000095951.17	ENST00000491710.5	579	4	-477	-5890	-477	5825	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAAGAGTCTTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	12008284	12126047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12008876_12015525_12015669_12089183_12089238_12119889
WTC11_00078397	chr6	+	9116	9	NIC	ENSG00000095951.17	novel	2085	4	NA	NA	-263	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	8.52936105461599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	12011622	True	NA	7	True	AGTAAA	-20	NA	12011736	12164999	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
WTC11_00078400	chr6	+	357	1	FSM	ENSG00000214012.4	ENST00000449496.2	1282	1	304	621	304	-621	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCTCTGGGTTGACCA	NA	False	NA	NA	False	AGTAAA	-19	NA	19613058	19613415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_19613100_19613400
WTC11_00078401	chr6	+	4948	8	NNC	ENSG00000112242.16	novel	5036	7	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9236838584876	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	NA	False	NA	9	True	AATAAA	-45	NA	20401714	20493714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_20402358_20402609_20402626_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
WTC11_00078402	chr6	+	1655	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	0	18	0	-18	multi-exon	FALSE	canonical	1	1	junction_1	44.1569926512212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTATGGAGTGCTGA	20530353	True	NA	NA	False	NA	NA	NA	20534480	20559654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
WTC11_00078403	chr6	+	505	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATGTTTTTCAGGGCAGC	NA	False	NA	NA	False	NA	NA	NA	21361534	21362039	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21361500_21362000
WTC11_00078404	chr6	+	285	1	FSM	ENSG00000220771.2	ENST00000404566.2	256	1	-261	232	-261	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGAAGCTGCAGCGGGA	21601855	False	NA	NA	False	NA	NA	NA	21601866	21602151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21601900_21602200
WTC11_00078407	chr6	+	2243	12	NIC	ENSG00000272168.9	novel	1889	12	NA	NA	27	162	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	32.5837763210289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGACGTATAGTAGATCGG	21664143	True	NA	NA	False	ATTAAA	-21	NA	21666470	22111310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_21666646_21668646_21668900_21742916_21743043_21758392_21758535_21783631_21783709_21802656_21802741_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22063019_22063241_22110746
WTC11_00078408	chr6	+	459	1	FSM	ENSG00000272402.1	ENST00000606921.1	405	1	-65	11	-65	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATATACTTTACTTG	24706654	False	NA	NA	False	AATAAA	-9	NA	24706681	24707140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24706700_24707100
WTC11_00078409	chr6	+	909	3	NNC	ENSG00000079691.18	novel	5485	37	NA	NA	52	-166811	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	26.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTGTTGCTGTTT	25276767	True	NA	NA	False	ATTAAA	-17	NA	25279425	25285786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_25279836_25284811_25284910_25285385
WTC11_00078410	chr6	+	477	1	FSM	ENSG00000287080.2	ENST00000612966.3	486	1	1	8	1	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTCACAATTTCACTTA	26022888	True	NA	NA	False	NA	NA	NA	26045384	26045861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26045400_26045900
WTC11_00078411	chr6	+	224	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGATGAGGCAGGAGA	26160500	False	NA	NA	False	NA	NA	NA	26160536	26160760	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26160500_26160800
WTC11_00078412	chr6	+	1723	1	FSM	ENSG00000274290.3	ENST00000614097.3	470	1	-865	-388	-865	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTTCTAAAGGAAAAAAT	NA	False	NA	NA	False	AAAAAG	-23	NA	26182895	26184618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26182900_26184600
WTC11_00078413	chr6	+	412	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	32	-32	32	32	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGATTGGTTGGTCTCTTT	26204585	True	NA	NA	False	NA	NA	NA	26204641	26205053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26204600_26205100
WTC11_00078414	chr6	+	226	1	FSM	ENSG00000278588.2	ENST00000377733.4	482	1	238	18	238	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTAAGAGCCACCCATG	26273155	False	NA	NA	False	AGTAAA	-38	NA	26273168	26273394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26273200_26273400
WTC11_00078415	chr6	+	431	2	FSM	ENSG00000186470.14	ENST00000528222.1	885	2	-8	462	2	-462	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGAATGATTCCATGAT	26365131	True	NA	NA	False	NA	NA	NA	26365199	26368267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26365353_26367989
WTC11_00078416	chr6	+	574	3	FSM	ENSG00000186470.14	ENST00000528541.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCGATTCTGCGGGAT	26365189	False	NA	NA	False	NA	NA	NA	26365257	26368765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26365353_26367989_26368268_26368564
WTC11_00078417	chr6	+	556	1	FSM	ENSG00000186470.14	ENST00000604202.1	3009	1	2078	375	2078	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCCTGGGAGGGCTAAA	26374702	False	NA	NA	False	NA	NA	NA	26374770	26375326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26374800_26375300
WTC11_00078420	chr6	+	3371	10	FSM	ENSG00000026950.17	ENST00000289361.11	3388	10	13	4	-7	0	multi-exon	FALSE	canonical	2	5	junction_1	2.53859103528797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCTTCAACTTGGCTT	26402177	True	NA	5	True	AATAAA	-14	NA	26402287	26415204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26402413_26405371_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26413168
WTC11_00078422	chr6	+	3380	3	FSM	ENSG00000112812.16	ENST00000485603.1	3411	3	0	31	0	-27	multi-exon	FALSE	canonical	3	90	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATATAAATGGAAACTTG	27252918	False	NA	-19	True	NA	NA	NA	27252985	27256593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27254873_27254985_27255132_27255246
WTC11_00078423	chr6	+	265	1	FSM	ENSG00000217862.2	ENST00000406085.2	265	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCACGTACCTCATGTA	NA	False	NA	NA	False	NA	NA	NA	27807074	27807339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27807100_27807300
WTC11_00078424	chr6	+	2641	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	-1205	-186	-1205	186	mono-exon	FALSE	NA	NA	NA	NA	NA	834	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGACATACCCACATG	27707662	False	NA	103	True	GATAAA	-27	NA	27808845	27811486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27808800_27811500
WTC11_00078425	chr6	+	509	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	-43	16	-43	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGAGCCACCTACTAT	27865253	False	NA	NA	False	AATACA	-8	NA	27865273	27865782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27865300_27865800
WTC11_00078426	chr6	+	240	1	FSM	ENSG00000124657.1	ENST00000244623.1	942	1	758	-56	758	56	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTAAGTTGCCCTAT	NA	False	NA	-74	True	NA	NA	NA	27957998	27958238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27958000_27958200
WTC11_00078427	chr6	+	2538	4	FSM	ENSG00000197279.5	ENST00000377325.2	2514	4	-24	0	-24	0	multi-exon	FALSE	canonical	1	1	junction_1	100.870654250326	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	28080531	False	NA	19	True	AATAAA	-33	NA	28080543	28089563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28081531_28085480_28085892_28086171_28086311_28088562
WTC11_00078428	chr6	+	2071	7	FSM	ENSG00000198315.11	ENST00000457389.6	2071	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.6051136007927	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGTCTTTCAGTGTAC	28139008	True	NA	NA	False	NA	NA	NA	28141937	28154073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28142030_28144330_28144425_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
WTC11_00078431	chr6	+	1813	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	-19	0	-16	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6659604392971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349187	True	NA	7	True	AATAAA	-15	NA	28349930	28366746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
WTC11_00078433	chr6	+	540	1	FSM	ENSG00000231162.4	ENST00000489116.1	835	1	193	102	193	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAGACCCAAGAATGAT	28447155	False	NA	NA	False	NA	NA	NA	28447165	28447705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28447200_28447700
WTC11_00078434	chr6	+	218	1	FSM	ENSG00000263426.2	ENST00000580476.2	299	1	57	24	57	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCGACGAGACCCGGTC	NA	False	NA	NA	False	NA	NA	NA	28977531	28977749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28977500_28977700
WTC11_00078435	chr6	+	1360	8	FSM	ENSG00000204642.14	ENST00000376861.5	1544	8	184	0	184	0	multi-exon	FALSE	canonical	1	1	junction_1	7.55388803794416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAGATATGTTTTTATA	NA	False	NA	16	True	AATAAA	-28	NA	29722958	29726526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29723001_29723305_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
WTC11_00078437	chr6	+	884	6	FSM	ENSG00000204642.14	ENST00000434407.6	884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.01498596380555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAGATATGTTTTTATA	29723297	False	NA	16	True	AATAAA	-28	NA	29723463	29726526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725446_29725564_29726010_29726044_29726402
WTC11_00078438	chr6	+	1140	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	-8	-5	-8	5	multi-exon	FALSE	canonical	0	0	junction_2	3.49857113690718	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTCTTGTGCTGAT	NA	False	NA	17	True	AATAAA	-28	NA	29827836	29831130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
WTC11_00078439	chr6	+	1229	6	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-37452	607	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	19.9839935948749	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTATGCTGATTT	NA	False	NA	19	True	AATAAA	-30	NA	29889006	29929839	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_29889182_29927904_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
WTC11_00078440	chr6	+	1723	2	FSM	ENSG00000204619.8	ENST00000376758.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30068151	False	NA	15	True	AATAAA	-19	NA	30068205	30070333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30068699_30069103
WTC11_00078441	chr6	+	1078	5	NNC	ENSG00000243753.6	novel	1336	6	NA	NA	6	640	intron_retention	FALSE	canonical	2	6	junction_2	51.3955250970354	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACATGGGGGGGCCTGA	30259455	True	NA	NA	False	NA	NA	NA	30259578	30262343	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30260085_30260396_30260527_30261203_30261480_30261586_30261704_30262294
WTC11_00078442	chr6	+	3593	8	NIC	ENSG00000204599.15	novel	3338	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	27.0396534212785	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	NA	False	NA	22	True	NA	NA	NA	30326478	30343728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
WTC11_00078446	chr6	+	227	1	FSM	ENSG00000224936.1	ENST00000425839.1	1370	1	-49	1192	-49	-1192	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAACTGGTGTCTCTGTT	NA	False	NA	NA	False	AATACA	-19	NA	30468832	30469059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30468800_30469100
WTC11_00078448	chr6	+	649	3	ISM	ENSG00000204576.12	ENST00000498336.5	2005	5	-25	1970	-4	-1970	5prime_fragment	FALSE	canonical	3	12	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTTAATCACGGTT	NA	False	NA	-2	True	AATAAA	-3	NA	30557290	30561753	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30557451_30558149_30558213_30561327
WTC11_00078449	chr6	+	4275	4	FSM	ENSG00000204574.14	ENST00000479542.1	893	4	313	-3695	313	-2741	multi-exon	FALSE	canonical	3	720	junction_1	18.624953392932	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAACATCGTAGAAATGT	30589727	False	NA	-2	True	TATAAA	-40	NA	30589741	30594438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30589975_30590148_30590214_30590305_30590379_30590534
WTC11_00078452	chr6	+	1243	6	NNC	ENSG00000204564.12	novel	1978	6	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	42.6023473531682	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCACATATCACTTTCT	NA	False	NA	24	True	AATAAA	-24	NA	30647432	30653107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30647608_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
WTC11_00078453	chr6	+	4617	18	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	0	817	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	172.231557336513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATGAGCATAAGCCATA	NA	False	NA	9	True	AATAAA	-17	NA	30880969	30900973	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00078454	chr6	+	3924	18	ISM	ENSG00000204580.14	ENST00000376570.8	3820	19	289	-1	20	1	3prime_fragment	FALSE	canonical	3	84	junction_1	179.132588964336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTGTGAGTGGGTTCC	30883979	False	NA	17	True	AATAAA	-15	NA	30884372	30900153	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
WTC11_00078455	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.02003030735275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908205	False	NA	35	True	AATAAA	-17	NA	30908220	30914106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
WTC11_00078456	chr6	+	3377	29	FSM	ENSG00000137411.19	ENST00000625423.2	3362	29	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.1199104942622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	30914194	False	NA	8	True	GATAAA	-14	NA	30914204	30926456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30914345_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
WTC11_00078457	chr6	+	1799	6	NNC	ENSG00000137310.12	novel	3243	4	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.9444015112229	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTAGTCAGAGCACCT	NA	False	NA	NA	False	NA	NA	NA	31158540	31163003	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31158723_31158896_31159036_31159142_31159708_31161446_31161578_31161750_31162006_31162476
WTC11_00078458	chr6	+	1979	4	NIC	ENSG00000204520.14	novel	2260	6	NA	NA	6423	-3	intron_retention	FALSE	canonical	3	68	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGGTGTCATTGTTT	31409998	False	NA	5	True	NA	NA	NA	31410094	31415310	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_31411360_31411946_31412226_31412324_31412461_31415011
WTC11_00078459	chr6	+	672	6	FSM	ENSG00000204472.13	ENST00000376059.8	655	6	-17	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.9635727314629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	31615107	True	NA	15	True	AATAAA	-16	NA	31615216	31617015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31615355_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
WTC11_00078462	chr6	+	410	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	0	115	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	31715332	True	NA	NA	False	NA	NA	NA	31715347	31717804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31715411_31715501_31715625_31717580
WTC11_00078465	chr6	+	4006	29	FSM	ENSG00000255152.8	ENST00000493662.6	3991	29	-15	0	-15	0	multi-exon	FALSE	canonical	2	2	junction_6	19.3510467469871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGTTTGTTTCTCA	31738284	True	NA	26	True	AATAAA	-37	NA	31740004	31764850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744138_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
WTC11_00078471	chr6	+	1141	11	FSM	ENSG00000204351.12	ENST00000461073.5	1157	11	0	16	0	-16	multi-exon	FALSE	canonical	2	6	junction_7	57.2504148456585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCCATGGGCTCCCC	31956273	True	NA	NA	False	NA	NA	NA	31959156	31962798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961546_31961676_31961908_31962055_31962438_31962586_31962713
WTC11_00078473	chr6	+	2252	10	FSM	ENSG00000221988.13	ENST00000395523.5	2111	10	-144	3	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	47.6882882845062	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	NA	False	NA	15	True	AATAAA	-15	NA	32153432	32163675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32153637_32153998_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
WTC11_00078479	chr6	+	1901	7	NIC	ENSG00000204256.14	novel	3210	12	NA	NA	265	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	250.889362513085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAATAAAGAAAATATTA	32976783	True	NA	9	True	NA	NA	NA	32976833	32981285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_32976937_32977416_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
WTC11_00078480	chr6	+	695	3	FSM	ENSG00000223865.11	ENST00000488575.1	421	3	0	-274	0	0	multi-exon	FALSE	canonical	3	58	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCTGATGACCCTC	NA	False	NA	NA	False	NA	NA	NA	33080385	33085231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33080535_33080671_33080936_33084949
WTC11_00078483	chr6	+	2852	6	NNC	ENSG00000224557.8	novel	1092	3	NA	NA	5	14115	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_1	12.4963994814506	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGCCCACCTGCGCAC	NA	False	NA	NA	False	AAGAAA	-42	NA	33116660	33143199	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33116742_33116973_33117221_33128513_33128745_33131244_33131415_33133451_33133496_33141120
WTC11_00078484	chr6	+	2612	6	NNC	ENSG00000224557.8	novel	727	3	NA	NA	11	13933	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	12.2702893201424	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTTGTGAGGAAGGAC	NA	False	NA	13	True	AATAAA	-14	NA	33116689	33143017	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33116833_33116973_33117221_33128633_33128745_33131244_33131415_33133451_33133496_33141120
WTC11_00078486	chr6	+	1109	2	FSM	ENSG00000231500.7	ENST00000472218.1	1109	2	0	0	0	0	multi-exon	FALSE	canonical	3	31810	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33274876	False	NA	6	True	AATAAA	-19	NA	33275320	33276510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33275884_33275964
WTC11_00078488	chr6	+	2252	15	NIC	ENSG00000112511.18	novel	2263	15	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	33.6800673808042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	NA	False	NA	8	True	AATAAA	-15	NA	33411021	33416439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414954_33415145_33415234_33415330_33415592_33415671_33415809
WTC11_00078489	chr6	+	837	2	NNC	ENSG00000096433.11	novel	9079	58	NA	NA	66	-64591	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTAATTGTCCATGATCA	33618099	True	NA	9	True	ATTAAA	-20	NA	33621387	33631971	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33621692_33631438
WTC11_00078490	chr6	+	1853	6	NNC	ENSG00000137309.20	novel	1920	6	NA	NA	0	41736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7680.16003999917	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTCCTGTTTCTTTC	34237068	False	NA	NA	False	AATAAA	-13	NA	34237203	34287967	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830_34246231_34287942
WTC11_00078491	chr6	+	1454	10	FSM	ENSG00000064999.15	ENST00000650178.1	1454	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	66.949031654731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGGGTTGTGGGTTTAT	34885953	True	NA	NA	False	NA	NA	NA	34889313	34989316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34889600_34967238_34967320_34970009_34970167_34972580_34972644_34981689_34981987_34982751_34982828_34983112_34983215_34983323_34983426_34985081_34985279_34989223
WTC11_00078492	chr6	+	3520	7	FSM	ENSG00000112033.14	ENST00000448077.6	3516	7	-17	13	-17	0	multi-exon	FALSE	canonical	0	0	junction_2	38.9547458241255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	35340469	True	NA	17	True	AATAAA	-19	NA	35342540	35428178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35342682_35347066_35347151_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
WTC11_00078495	chr6	+	3889	13	NNC	ENSG00000112062.11	novel	4222	12	NA	NA	0	5015	intron_retention	FALSE	non_canonical	0	0	junction_12	61.4428370294066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACCATGGCTGACTGCT	36024645	True	NA	NA	False	NA	NA	NA	36027807	36116251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379_36110760_36116107
WTC11_00078502	chr6	+	3975	9	FSM	ENSG00000146122.17	ENST00000631498.1	6730	9	2755	0	1274	0	multi-exon	FALSE	canonical	2	5	junction_8	2.28787565221539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTGCCTTTAAACTT	NA	False	NA	16	True	ATTAAA	-16	NA	39888678	39904865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
WTC11_00078503	chr6	+	772	2	FSM	ENSG00000204091.8	ENST00000373170.2	1165	2	398	-5	398	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGGGCTGATTGGTGT	40378722	False	NA	9	True	AATAAA	-20	NA	40378734	40379890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_40378898_40379281
WTC11_00078504	chr6	+	6206	10	FSM	ENSG00000001167.15	ENST00000341376.11	6209	10	0	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_2	41.9217377832245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTATCTCAAGTGTGTA	41070780	True	NA	8	True	AATAAA	-18	NA	41072973	41102400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41073085_41079028_41079165_41080810_41080898_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
WTC11_00078505	chr6	+	3300	17	FSM	ENSG00000137166.17	ENST00000373057.7	3300	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	24.8592915224871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCCT	41546637	False	NA	5	True	NA	NA	NA	41546647	41599963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41546868_41565744_41565965_41577985_41578082_41584768_41584892_41585436_41585518_41587008_41587157_41587298_41587513_41587792_41587898_41588643_41588732_41589770_41589855_41589962_41590171_41590270_41590348_41591220_41591323_41594869_41594992_41597175_41597243_41597780_41597951_41598788
WTC11_00078506	chr6	+	2377	7	NNC	ENSG00000137413.17	novel	969	8	NA	NA	1	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.6344406910062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGTAAGCTTTGAACT	42047037	True	NA	12	True	AATAAA	-30	NA	42050522	42080905	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42066311_42066358_42079082
WTC11_00078507	chr6	+	431	4	FSM	ENSG00000137413.17	ENST00000482432.1	556	4	116	9	45	-9	multi-exon	FALSE	canonical	1	1	junction_1	44.9691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTTTGAACTGAG	42050989	False	NA	NA	False	NA	NA	NA	42051039	42056014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42051152_42051356_42051514_42055530_42055630_42055951
WTC11_00078510	chr6	+	8158	40	FSM	ENSG00000112659.14	ENST00000515773.5	8150	40	-8	0	-8	0	multi-exon	FALSE	canonical	2	11	junction_7	5.60043672571503	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGAGCAGGCTGACA	43181682	True	NA	14	True	AATAAA	-20	NA	43182175	43224587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43186959_43187096_43187245_43187440_43187712_43188119_43188522_43188716_43193000_43193209_43196068_43196863_43198608_43198856_43199265_43199372_43199928_43200157_43200435_43200527_43200662_43200835_43202715_43202822_43203108_43203205_43203416_43203593_43203853_43203988_43204359_43204540_43204747_43204858_43204932_43205116_43205262_43205424_43206006_43206236_43206320_43206511_43213148_43213295_43213437_43213568_43213712_43213913_43215078_43215327_43216157_43216504_43220458_43220600_43220746_43220912_43221157_43221322_43221684_43221779_43222315_43222391_43222530_43222642_43222778_43222897_43223263_43223398_43224094_43224169_43224249
WTC11_00078513	chr6	+	258	1	FSM	ENSG00000179157.4	ENST00000314255.4	741	1	483	0	483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACCACCTCATCAAGAC	NA	False	NA	NA	False	NA	NA	NA	43363961	43364219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43364000_43364200
WTC11_00078514	chr6	+	416	4	FSM	ENSG00000124574.15	ENST00000502549.1	478	4	62	0	62	0	multi-exon	TRUE	canonical	1	1	junction_2	4.78423336480244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCTCCGACTTGCAGCT	43427151	False	NA	NA	False	NA	NA	NA	43427609	43432176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43427700_43427967_43428140_43430747_43430867_43432141
WTC11_00078515	chr6	+	2732	10	FSM	ENSG00000137221.14	ENST00000259751.5	2720	10	-12	0	-8	0	multi-exon	FALSE	canonical	3	7	junction_3	42.7094692712529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474743	True	NA	14	True	AATAAA	-15	NA	43477560	43506553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
WTC11_00078517	chr6	+	2662	22	ISM	ENSG00000137225.13	ENST00000398776.2	2718	23	7946	3	7946	-3	3prime_fragment	FALSE	canonical	1	7	junction_18	5.44775224612384	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCATGTCTCTGTGTT	44166513	True	NA	4	True	AATAAA	-15	NA	44166765	44184398	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_44166830_44169280_44169532_44169905_44169976_44172301_44172421_44172939_44173074_44173217_44173387_44176067_44176152_44176252_44176339_44176580_44176656_44176837_44176999_44177241_44177421_44179618_44179631_44179951_44180164_44180459_44180500_44180596_44180663_44180747_44180806_44180932_44180998_44181251_44181321_44182940_44183020_44183118_44183236_44183704_44183764_44183905
WTC11_00078520	chr6	+	2304	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	-21	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	694.769980240789	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44218620	True	NA	79	True	AATAAA	-18	NA	44219614	44234142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
WTC11_00078521	chr6	+	4433	4	NNC	ENSG00000001561.7	novel	4644	4	NA	NA	64	-144	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	16.8193010820572	333	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTATGTAGTGCCT	46129675	True	NA	-47	True	AATAAA	-22	NA	46130052	46146544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_46130190_46139550_46140410_46141051_46141223_46143278
WTC11_00078522	chr6	+	1253	6	NNC	ENSG00000153291.16	novel	2526	7	NA	NA	2566	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	24.1114080882888	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTGTTGAAGGAAGGTG	46654847	False	NA	1	True	AATAAA	-14	NA	46655540	46677003	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_46656031_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46676646
WTC11_00078525	chr6	+	326	1	FSM	ENSG00000270382.1	ENST00000605188.1	279	1	80	-127	80	127	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACAACACAAACCACTTC	NA	False	NA	NA	False	NA	NA	NA	52657452	52657778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52657500_52657800
WTC11_00078526	chr6	+	2246	13	NNC	ENSG00000112146.17	novel	4743	13	NA	NA	5	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	109.576457325468	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCAAGAAAATATATTTG	53062310	True	NA	NA	False	AATAAA	-19	NA	53065408	53098361	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092845_53093465_53093562_53093884_53093979_53095512_53095665_53097721
WTC11_00078527	chr6	+	1745	13	NNC	ENSG00000112146.17	novel	4743	13	NA	NA	11	-1	at_least_one_novel_splicesite	TRUE	canonical	1	92	junction_2	68.8179462220591	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCTAAGTTATAAATGT	53062316	True	NA	NA	False	ATTAAA	-17	NA	53065414	53097887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_53065793_53071056_53071144_53073480_53073639_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
WTC11_00078528	chr6	+	2332	14	NNC	ENSG00000112146.17	novel	4743	13	NA	NA	11	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	118.497347235181	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCAAGAAAATATATTTG	53062316	True	NA	NA	False	AATAAA	-19	NA	53065414	53098361	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53089742_53089855_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
WTC11_00078529	chr6	+	1858	14	NIC	ENSG00000112146.17	novel	4743	13	NA	NA	11	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	106.180264271239	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATATTTGGATGGCC	53062316	True	NA	NA	False	AATAAA	-26	NA	53065414	53098368	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721_53097792_53098160
WTC11_00078530	chr6	+	2825	13	NIC	ENSG00000137269.15	novel	3159	14	NA	NA	0	-255	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	46.3185677911377	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTATCTTTATAAGTGCA	53793616	True	NA	NA	False	AATAAA	-31	NA	53795004	53923870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_53795416_53842109_53842228_53882886_53882977_53896497_53896555_53896828_53896893_53897284_53897360_53899746_53899892_53902628_53902748_53904378_53904463_53913853_53913970_53919497_53919671_53920624_53920762_53922634
WTC11_00078531	chr6	+	534	2	FSM	ENSG00000137269.15	ENST00000490222.1	555	2	21	0	21	0	multi-exon	FALSE	canonical	3	165	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATGAGACGGTATGGA	NA	False	NA	NA	False	NA	NA	NA	53919260	53920748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_53919671_53920624
WTC11_00078532	chr6	+	2568	7	FSM	ENSG00000151917.18	ENST00000370746.8	2568	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	10.6405931330082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTCTTGTTTCTTTA	56954888	True	NA	NA	False	AATAAA	-20	NA	56955106	57027346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_56955461_56981710_56981931_56992377_56992556_57015132_57015354_57017206_57017400_57018420_57018558_57026081
WTC11_00078533	chr6	+	1670	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTGTGAGTCTACTT	NA	False	NA	7	True	AATAAA	-28	NA	57057374	57059044	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_57057400_57059000
WTC11_00078534	chr6	+	2583	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	-22	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_8	62.3397144683868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314291	True	NA	12	True	AATAAA	-13	NA	57317607	57646850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
WTC11_00078535	chr6	+	1200	11	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	2	-15	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	44.7660585711988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCGTCTAGAAACTTTG	57314315	True	NA	NA	False	ATTAAA	-1	NA	57317631	57587096	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57586995
WTC11_00078536	chr6	+	725	3	FSM	ENSG00000225096.3	ENST00000420759.3	1779	3	118	936	0	163	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAATAAACCTTGAAAAT	57961636	True	NA	NA	False	ATTAAA	-35	NA	57961647	57972661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57961743_57971594_57971657_57972093
WTC11_00078537	chr6	+	473	1	FSM	ENSG00000198225.5	ENST00000370659.1	1579	1	152	954	152	-954	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTTCTCCTGGTATGT	NA	False	NA	NA	False	NA	NA	NA	63211597	63212070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63211600_63212100
WTC11_00078538	chr6	+	324	1	FSM	ENSG00000198225.5	ENST00000370659.1	1579	1	1049	206	1049	-206	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCTCCTGTTTTTTGA	NA	False	NA	NA	False	AAGAAA	-23	NA	63212494	63212818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63212500_63212800
WTC11_00078540	chr6	+	2577	1	FSM	ENSG00000214558.4	ENST00000398578.2	2436	1	-138	-3	-138	3	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGTGAGGACACTTTAA	NA	False	NA	NA	False	NA	NA	NA	65302383	65304960	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_65302400_65305000
WTC11_00078541	chr6	+	6268	23	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	1	0	intron_retention	FALSE	canonical	2	13	junction_3	39.8142640247777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	70407513	False	NA	22	True	AATAAA	-34	NA	70413578	70561174	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70415290_70415377_70426569_70426710_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
WTC11_00078543	chr6	+	546	3	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-16	-3693	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	100.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATAGTTTGGGTAATCAT	70562179	True	NA	89	True	GGGGCT	-38	NA	70566900	70585876	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_70567005_70579413_70579567_70585587
WTC11_00078544	chr6	+	854	1	FSM	ENSG00000271967.1	ENST00000606298.1	543	1	-301	-10	-301	10	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGATTGATCAATTAG	NA	False	NA	NA	False	AATAAA	-29	NA	70596136	70596990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70596100_70597000
WTC11_00078545	chr6	+	2862	2	FSM	ENSG00000229852.4	ENST00000671298.1	2928	2	46	20	46	-20	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCATGTGCCACCATGT	73262967	True	NA	NA	False	NA	NA	NA	73263267	73301769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73263417_73299056
WTC11_00078546	chr6	+	2791	1	FSM	ENSG00000234882.1	ENST00000433978.1	1316	1	-1330	-145	-1330	145	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAATTCACAAAAAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	73290631	73293422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73290600_73293400
WTC11_00078547	chr6	+	1316	1	FSM	ENSG00000234882.1	ENST00000433978.1	1316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAACATAAGGAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	73291961	73293277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73292000_73293300
WTC11_00078548	chr6	+	2678	13	FSM	ENSG00000135297.17	ENST00000415954.6	2837	13	159	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.4139558823818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	73460223	True	NA	7	True	ATTAAA	-15	NA	73461736	73501096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73480996_73481117_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00078550	chr6	+	3662	13	FSM	ENSG00000135297.17	ENST00000679947.1	3650	13	-12	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	78.1943358988787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480317_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
WTC11_00078553	chr6	+	2871	16	NNC	ENSG00000112701.18	novel	6671	24	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	172.17691160225	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATATCTTATGTCTTTG	75598343	True	NA	3	True	ATTAAA	-13	NA	75601879	75678971	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_75602577_75620292_75620421_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
WTC11_00078554	chr6	+	4402	25	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	73	junction_2	117.168681822405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	75598343	True	NA	16	True	AATAAA	-19	NA	75601879	75715904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
WTC11_00078555	chr6	+	3524	16	ISM	ENSG00000112701.18	ENST00000447266.7	6671	24	59	38491	12	-77	5prime_fragment	FALSE	canonical	2	173	junction_5	97.885556760036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATAGTTCTCTGTAAT	75601780	False	NA	3	True	AATAAA	-18	NA	75601938	75679790	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
WTC11_00078556	chr6	+	5121	23	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	12	-1063	combination_of_known_junctions	FALSE	canonical	2	16	junction_18	115.18204240489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGTTGTTTTTTTTAA	75601780	False	NA	NA	False	AATAAA	-14	NA	75601938	75717218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
WTC11_00078557	chr6	+	346	2	FSM	ENSG00000287811.2	ENST00000691944.1	1480	2	67	1067	67	1004	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTATTCATTGTTTA	79536699	True	NA	NA	False	NA	NA	NA	79537654	79538843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_79537885_79538727
WTC11_00078559	chr6	+	2590	1	FSM	ENSG00000272129.1	ENST00000606629.1	1436	1	-1171	17	-1171	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTCATCTCAAACTT	80354239	False	NA	-8	True	AATAAA	-10	NA	80354252	80356842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80354300_80356800
WTC11_00078560	chr6	+	2659	4	FSM	ENSG00000233967.7	ENST00000427048.7	2659	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATGAGTAAGTGAGGA	NA	False	NA	NA	False	TTTAAA	-8	NA	80441294	80463063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80443539_80453156_80453262_80454109_80454228_80462871
WTC11_00078561	chr6	+	884	5	ISM	ENSG00000083097.15	ENST00000369739.7	7743	39	0	57962	0	-18559	5prime_fragment	TRUE	canonical	3	8	junction_1	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCAGACATATATTGAG	NA	False	NA	NA	False	NA	NA	NA	83096728	83110369	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_83096824_83096924_83097116_83100704_83100887_83108909_83109081_83110124
WTC11_00078562	chr6	+	595	2	FSM	ENSG00000083097.15	ENST00000481979.1	746	2	119	32	119	-32	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTACGGGATGACA	NA	False	NA	NA	False	GATAAA	-23	NA	83153510	83154241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_83154044_83154179
WTC11_00078563	chr6	+	367	1	FSM	ENSG00000217769.4	ENST00000468100.1	304	1	-63	0	-63	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCAAGGCTCCGGACTCC	NA	False	NA	NA	False	AAGAAA	-10	NA	86897054	86897421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_86897100_86897400
WTC11_00078564	chr6	+	12508	9	NIC	ENSG00000188994.13	novel	12341	8	NA	NA	-275	93	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.5743504682526	1716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGGAATGCTTATTTC	87155216	False	NA	118	True	NA	NA	NA	87155289	87266036	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_87155362_87155562_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
WTC11_00078565	chr6	+	1707	7	FSM	ENSG00000164414.19	ENST00000369556.7	1720	7	13	0	13	0	multi-exon	FALSE	canonical	1	1	junction_5	33.0424810744526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAATTGTTTAATCA	87472113	True	NA	79	True	AATAAA	-11	NA	87472937	87512330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87509040_87509176_87511398
WTC11_00078566	chr6	+	2623	21	NIC	ENSG00000135336.16	novel	2501	20	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	188.467795657507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584032	True	NA	16	True	AATAAA	-23	NA	87590099	87667451	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
WTC11_00078569	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31.4081553457414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825697	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
WTC11_00078571	chr6	+	8166	1	FSM	ENSG00000280451.1	ENST00000624663.1	1212	1	-2980	-3974	-2980	3974	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTATATTTGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	93808844	93817010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_93808800_93817000
WTC11_00078572	chr6	+	3712	4	NNC	ENSG00000172461.11	novel	12793	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	5.73488351136175	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCTAGTGCTGGTTAT	96014768	True	NA	13	True	AATAAA	-20	NA	96015976	96215612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_96016213_96114038_96114128_96203147_96203672_96212749
WTC11_00078573	chr6	+	3624	11	FSM	ENSG00000186231.17	ENST00000369261.9	3698	11	74	0	74	0	multi-exon	TRUE	canonical	0	0	junction_4	1.92093727122985	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCACTAACTTCATATA	96924787	False	NA	NA	False	AATAAA	-21	NA	96924801	97140753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_96925027_96966995_96967084_96975996_96976178_97041491_97041600_97064627_97064727_97085125_97085342_97113782_97114510_97127403_97127463_97130756_97130950_97132652_97132748_97139120
WTC11_00078574	chr6	+	934	7	NNC	ENSG00000271860.8	novel	1006	8	NA	NA	-36686	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	15.1299922890485	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTTTTTCGTTATC	97775742	True	NA	3	True	ATTAAA	-17	NA	97779854	98114593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_97780096_97828048_97828207_97969405_97969467_97972525_97972671_98099185_98099271_98113798_98113861_98114411
WTC11_00078575	chr6	+	1688	2	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAACTGGACTTTCTGTC	97775745	True	NA	-1	True	AATAAA	-13	NA	97779857	97792310	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_97780096_97790860
WTC11_00078578	chr6	+	2877	5	NNC	ENSG00000279170.3	novel	1873	4	NA	NA	0	7006	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	28.9082600652478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTTTAATAAGTGTTC	99519800	True	NA	NA	False	CATAAA	-26	NA	99521074	99540191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531955_99537930
WTC11_00078579	chr6	+	5291	3	NNC	ENSG00000187772.8	novel	912	6	NA	NA	1923	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	170	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	104958779	False	NA	15	True	AATAAA	-21	NA	104959029	105083332	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104959217_105026297_105026483_105078413
WTC11_00078580	chr6	+	206	2	FSM	ENSG00000203808.13	ENST00000664072.1	870	2	361	303	12	-303	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAGAGAAATGCTGACA	105137747	False	NA	NA	False	TATAAA	-34	NA	105137769	105147327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_105137924_105147275
WTC11_00078581	chr6	+	2892	4	NNC	ENSG00000130349.10	novel	1146	5	NA	NA	-7	1067	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	15.1510909031513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAATTTGTACCTTT	NA	False	NA	2	True	AATAAA	-14	NA	107028191	107041974	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_107028925_107030024_107030108_107039748_107040231_107040380
WTC11_00078584	chr6	+	1544	11	NIC	ENSG00000183137.15	novel	1649	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	26.7149770727957	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	109094443	True	NA	13	True	AATAAA	-18	NA	109095550	109160765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159154_109159268_109159463_109160571
WTC11_00078587	chr6	+	917	1	FSM	ENSG00000213149.3	ENST00000417134.1	909	1	73	-81	73	81	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTCAGTGCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	110858311	110859228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110858300_110859200
WTC11_00078589	chr6	+	1021	4	FSM	ENSG00000231889.8	ENST00000438298.7	1093	4	-200	272	-159	0	multi-exon	FALSE	canonical	1	8	junction_2	23.3666428910958	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTCTGAAGCA	111483326	False	NA	NA	False	ACTAAA	-26	NA	111483336	111576753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361
WTC11_00078590	chr6	+	616	4	NNC	ENSG00000231889.8	novel	886	4	NA	NA	-6	5329	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	16.0069429380573	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATATGGAATGATCTCT	111482490	True	NA	-2	True	AATAAA	-9	NA	111483543	111592463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_111483666_111574620_111574803_111576361_111576471_111592260
WTC11_00078591	chr6	+	3528	1	FSM	ENSG00000255389.1	ENST00000531702.1	2421	1	-1110	3	-1110	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCCCATGTTTTTTT	NA	False	NA	7	True	AATAAA	-19	NA	111598764	111602292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111598800_111602300
WTC11_00078592	chr6	+	1430	4	NIC	ENSG00000228624.8	novel	786	6	NA	NA	-905	-477	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	51.8137690837741	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAACCCTATCTTAAAAA	114424655	False	NA	NA	False	NA	NA	NA	114424706	114456157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_114425673_114437968_114438067_114448966_114449032_114455856
WTC11_00078593	chr6	+	1114	2	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1373	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	114426640	False	NA	NA	False	NA	NA	NA	114426701	114427941	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_114427089_114427214
WTC11_00078594	chr6	+	1154	3	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	114426642	False	NA	NA	False	NA	NA	NA	114426703	114427941	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_114427047_114427088_114427215_114427256
WTC11_00078597	chr6	+	8900	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	14941	3740	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTTTGATTTTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	114463900	114475445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114468612_114469145_114469300_114471410
WTC11_00078598	chr6	+	352	1	FSM	ENSG00000186743.2	ENST00000335020.2	740	1	460	-72	460	72	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCACATGTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	116039215	116039567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116039200_116039600
WTC11_00078599	chr6	+	997	2	ISM	ENSG00000111817.19	ENST00000647244.1	1631	5	5	176525	5	0	5prime_fragment	FALSE	canonical	3	10	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATTTTAAAATATAAATG	116253932	True	NA	NA	False	AATAAA	-22	NA	116254181	116259240	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_116254384_116258445
WTC11_00078600	chr6	+	3411	4	FSM	ENSG00000111817.19	ENST00000646710.1	3411	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	69.2290882986817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATATTTTCTATTAT	116365435	True	NA	NA	False	ACTAAA	-9	NA	116370986	116438139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116435586
WTC11_00078601	chr6	+	513	2	FSM	ENSG00000188820.13	ENST00000368604.2	540	2	0	27	0	-27	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGCTTTATTAAAAAATA	116462454	False	NA	-23	True	NA	NA	NA	116462466	116463741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116462521_116463282
WTC11_00078602	chr6	+	3474	13	NIC	ENSG00000164465.19	novel	3614	15	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	29.389505874641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTGACTCTCACTAG	117482551	False	NA	16	True	AATAAA	-16	NA	117482577	117549797	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540917_117541026_117544527_117544578_117545477_117545598_117547906
WTC11_00078603	chr6	+	573	2	FSM	ENSG00000111875.8	ENST00000511766.2	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTCACAGAGGAACTCT	118889719	True	NA	NA	False	TTTAAA	-29	NA	118894220	118901036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_118894523_118900765
WTC11_00078605	chr6	+	348	1	FSM	ENSG00000272472.1	ENST00000606756.1	1384	1	236	800	236	-800	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCGGCTTAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	122643623	122643971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122643600_122644000
WTC11_00078609	chr6	+	512	4	FSM	ENSG00000118518.17	ENST00000608340.5	512	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	31.8852107828483	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTATGAAGCTTTAG	127264408	True	NA	NA	False	NA	NA	NA	127266882	127286097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049
WTC11_00078610	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.9552093756753	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
WTC11_00078619	chr6	+	654	4	NIC	ENSG00000225177.6	novel	917	3	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	10.4029910228848	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTCTAAAGCCCTCTT	138692049	True	NA	16	True	NA	NA	NA	138692550	138697267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_138692618_138694392_138694548_138696596_138696756_138696994
WTC11_00078627	chr6	+	1934	1	FSM	ENSG00000229036.7	ENST00000406025.2	853	1	-1141	60	-1050	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGAACATCTATGCTAG	NA	False	NA	NA	False	NA	NA	NA	143489373	143491307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143489400_143491300
WTC11_00078635	chr6	+	903	6	ISM	ENSG00000120265.19	ENST00000544496.5	1628	7	34	8890	2	0	5prime_fragment	FALSE	canonical	3	92	junction_3	691.922365587354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGTCTGCCCTTATTT	149734551	True	NA	22	True	ATTAAA	-15	NA	149749728	149802530	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199
WTC11_00078643	chr6	+	735	5	NIC	ENSG00000049618.24	novel	1401	5	NA	NA	7	42	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	50.9239629251299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGAATTGTTGTCATTG	156779396	False	NA	NA	False	AATAAA	-30	NA	156779406	156936715	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465_156935577_156936501
WTC11_00078654	chr6	+	3125	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	155	0	153	0	multi-exon	FALSE	canonical	2	2	junction_6	194.223624532472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	159723035	True	NA	NA	False	NA	NA	NA	159727150	159755713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
WTC11_00078656	chr6	+	588	2	NNC	ENSG00000146457.16	novel	3656	8	NA	NA	-1769	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	159739805	False	NA	16	True	AATAAA	-23	NA	159739823	159756319	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_159739858_159755765
WTC11_00078660	chr6	+	5742	4	NNC	ENSG00000280707.3	novel	980	4	NA	NA	-310	0	intron_retention	FALSE	canonical	3	144	junction_2	352.611526880346	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227877	False	NA	27	True	AATAAA	-16	NA	167227889	167237511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478
WTC11_00078662	chr6	+	4541	4	NNC	ENSG00000280707.3	novel	980	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	523.455399776863	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGAGTTTGTTCTTTTT	167214670	True	NA	25	True	AATAAA	-14	NA	167228300	167237509	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231859_167231958_167232478_167232561_167233245
WTC11_00078667	chr6	+	2455	4	NIC	ENSG00000130396.21	novel	7459	32	NA	NA	133	-2	combination_of_known_splicesites	TRUE	canonical	2	5	junction_2	92.5670927849993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTG	167952070	False	NA	11	True	AATAAA	-17	NA	167952081	167971910	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167952188_167962432_167962568_167969113_167969199_167969781
WTC11_00078671	chr6	+	4278	17	NIC	ENSG00000130023.16	novel	2160	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	72	junction_11	9.9543881655278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTCAGGATGCTTT	169751329	True	NA	18	True	AGTAAA	-16	NA	169751619	169781516	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
WTC11_00078672	chr6	+	1913	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	-5	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	22.9455878111675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	169751329	True	NA	22	True	AGTAAA	-20	NA	169751619	169781520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
WTC11_00078674	chr6	+	1007	8	NIC	ENSG00000112584.14	novel	1794	9	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	66.5346311544382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATTTTTTATTAGCAA	170304537	True	NA	19	True	AATAAA	-16	NA	170306773	170405078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_170306843_170330448_170330551_170348150_170348324_170358225_170358319_170391012_170391122_170395486_170395580_170404549_170404602_170404762
WTC11_00078675	chr6	-	872	1	FSM	ENSG00000188996.5	ENST00000380907.3	1162	1	127	163	127	-163	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTAGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	656973	656101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_656100_657000
WTC11_00078676	chr6	-	545	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	-9	0	9	multi-exon	FALSE	canonical	3	21	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATGGCTAGGAACTTA	-686584	True	NA	NA	False	NA	NA	NA	693108	679133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_679515_689138_689213_693018
WTC11_00078678	chr6	-	373	1	FSM	ENSG00000271361.1	ENST00000604204.1	631	1	208	50	208	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGGAGCAGCTGCTCA	-3023529	False	NA	NA	False	NA	NA	NA	3023564	3023191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3023200_3023600
WTC11_00078679	chr6	-	413	1	ISM	ENSG00000216819.1	ENST00000404155.1	871	3	2126	182	2126	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCGGGGTCACCACCT	NA	False	NA	NA	False	NA	NA	NA	3177638	3177225	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_3177200_3177600
WTC11_00078680	chr6	-	3592	2	FSM	ENSG00000137285.11	ENST00000681707.1	3592	2	0	0	0	0	multi-exon	FALSE	canonical	3	2883	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGCTAGTTTCTCA	-3227241	False	NA	NA	False	GATAAA	-36	NA	3227262	3223323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158
WTC11_00078682	chr6	-	2138	9	FSM	ENSG00000198721.13	ENST00000464057.5	2122	9	0	-16	0	3	multi-exon	FALSE	canonical	3	302	junction_8	129.103640537361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTTGGTAGTAGAGAG	-4125419	True	NA	-4	True	AATAAA	-33	NA	4135575	4115689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
WTC11_00078684	chr6	-	1056	8	NNC	ENSG00000124787.14	novel	1488	8	NA	NA	0	69312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.053273648114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAGCTCCTGTAATGA	-5003175	True	NA	NA	False	AAAAAG	-5	NA	5004036	4925404	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4925430_4995046_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
WTC11_00078685	chr6	-	1320	1	FSM	ENSG00000220685.3	ENST00000405549.1	1188	1	-51	-81	-51	81	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGCAGAAGATAACTGT	NA	False	NA	NA	False	NA	NA	NA	5067033	5065713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5065700_5067000
WTC11_00078686	chr6	-	3827	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	2.0861545523586	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCATCTGTGCAGAAGT	-6320579	True	NA	NA	False	AATAAA	-15	NA	6320662	6144084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
WTC11_00078688	chr6	-	1893	8	FSM	ENSG00000124783.14	ENST00000489567.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	241.935477989906	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGTAAAATAGTATGAA	-7300248	True	NA	-27	True	NA	NA	NA	7313174	7288681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301369_7303549_7303638_7309916_7310030_7313041
WTC11_00078690	chr6	-	1712	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	33.008416435139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGATGTGTTAATAGAAT	-8432296	True	NA	-5	True	AATAAA	-20	NA	8435483	8413071	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8427936_8428059_8429863_8430158_8434384_8434431_8435342
WTC11_00078691	chr6	-	1568	8	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	46.0957300249233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCAAGATGTGTTAAT	-8432296	True	NA	-10	True	AATAAA	-15	NA	8435483	8413076	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8419579_8419678_8420720_8420829_8427936_8428059_8429863_8430158_8435342
WTC11_00078694	chr6	-	5650	10	NNC	ENSG00000050393.12	novel	5460	9	NA	NA	-152	11768	intron_retention	FALSE	non_canonical	0	0	junction_1	145.719500546448	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATAAAAAAGTTGAAG	NA	False	NA	NA	False	NA	NA	NA	13814720	13774788	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13774816_13786556_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
WTC11_00078695	chr6	-	3751	1	Genic_Genomic	ENSG00000226673.2	novel	NA	NA	NA	NA	1816	548	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGAAATATTTTATAGA	-14283318	False	NA	NA	False	NA	NA	NA	14283329	14279578	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_14279600_14283300
WTC11_00078696	chr6	-	3432	5	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_3	16.1148223694833	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTTATTGGTGCGTG	-14302581	False	NA	-30	True	AATAAA	-14	NA	14302591	14290586	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14293297_14294807_14294934_14295304_14295384_14300138_14300294_14302229
WTC11_00078697	chr6	-	1093	3	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCATTTTGGGAGGCC	-14302459	False	NA	NA	False	AATGAA	-34	NA	14302469	14296767	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14297538_14300157_14300241_14302229
WTC11_00078698	chr6	-	1373	3	NIC	ENSG00000234261.5	novel	1017	4	NA	NA	-68	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	8	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTAACTCGGTGTCTG	-15022009	False	NA	-9	True	AATAAA	-8	NA	15022032	14976217	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_14977319_14997415_14997476_15021820
WTC11_00078699	chr6	-	1313	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	-8	0	5	multi-exon	FALSE	canonical	1	2	junction_7	67.5951332628047	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCACAGAGCTAGTTTGT	-15661731	True	NA	0	True	AATAAA	-22	NA	15663058	15522801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
WTC11_00078700	chr6	-	1533	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-67	75	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGACGCACATGAAAAAAG	NA	False	NA	NA	False	AATAAA	-44	NA	16264620	16259025	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_16259377_16262176_16263079_16264340
WTC11_00078703	chr6	-	864	3	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	26	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCCATGTTGCTCA	-18759024	True	NA	NA	False	NA	NA	NA	18759572	18754205	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754545_18757252_18757537_18759331
WTC11_00078704	chr6	-	204	1	FSM	ENSG00000222431.1	ENST00000410499.1	105	1	90	-189	90	189	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAGATTTACAGCCAAA	NA	False	NA	NA	False	AATAAA	-30	NA	20452383	20452179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_20452200_20452400
WTC11_00078705	chr6	-	412	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCCACCTACGACCTCAG	-21367130	True	NA	NA	False	NA	NA	NA	21367148	21366736	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_21366700_21367100
WTC11_00078707	chr6	-	4578	10	FSM	ENSG00000146038.12	ENST00000378454.8	4715	10	0	137	0	-136	multi-exon	TRUE	canonical	2	6	junction_3	3.2659863237109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTATAGTTTTATG	-24357931	True	NA	NA	False	AATATA	-38	NA	24358059	24171891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24174835_24178329_24178633_24205001_24205103_24278048_24278212_24288851_24288907_24290931_24291079_24301714_24301847_24301967_24302045_24353568_24353624_24357457
WTC11_00078708	chr6	-	286	3	ISM	ENSG00000112293.15	ENST00000474784.5	1030	11	70	19401	64	-10976	5prime_fragment	FALSE	canonical	2	5	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGTGTTAACTACAGAG	-24495122	False	NA	NA	False	NA	NA	NA	24495135	24486096	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_24486131_24489414_24489498_24494966
WTC11_00078709	chr6	-	714	2	FSM	ENSG00000111802.14	ENST00000480495.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTTCCAGGTTCCAGG	-24666755	False	7236	NA	False	NA	NA	NA	24666786	24665986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24666612_24666697
WTC11_00078710	chr6	-	1332	1	FSM	ENSG00000278705.3	ENST00000377745.5	388	1	0	-944	0	944	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTTGTTTTCTGGTTA	-25966489	True	NA	NA	False	AATATA	-26	NA	26027283	26025951	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26026000_26027300
WTC11_00078711	chr6	-	527	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCATTAAATGAGCTG	-25993723	True	NA	NA	False	NA	NA	NA	26033618	26033091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26033100_26033600
WTC11_00078712	chr6	-	519	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	65	-81	65	81	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTATCCGTTCCCCCTCC	-26168620	False	NA	51	True	NA	NA	NA	26197221	26196702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26196700_26197200
WTC11_00078714	chr6	-	907	2	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	37	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	26779004	26777696	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_26778133_26778533
WTC11_00078715	chr6	-	2955	1	FSM	ENSG00000271755.1	ENST00000607727.1	2955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACCTTCTAGCTTATT	NA	False	NA	NA	False	AATAAA	-26	NA	27406964	27404009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27404000_27407000
WTC11_00078716	chr6	-	265	1	FSM	ENSG00000217646.1	ENST00000402707.1	340	1	151	-76	151	76	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTAAGGACTCTTTTC	-27780503	False	NA	NA	False	NA	NA	NA	27864250	27863985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27864000_27864200
WTC11_00078718	chr6	-	3531	1	FSM	ENSG00000176933.5	ENST00000469761.1	992	1	-234	-2305	-234	2305	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGGTCTTTGGCTACT	-28218807	False	NA	-1	True	ATTAAA	-18	NA	28218868	28215337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28215300_28218900
WTC11_00078719	chr6	-	378	1	FSM	ENSG00000273712.1	ENST00000615674.1	271	1	9	-116	9	116	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCAAGCTAAAGTTATT	NA	False	NA	NA	False	NA	NA	NA	28315874	28315496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28315500_28315900
WTC11_00078720	chr6	-	2993	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	57	0	57	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28336065	False	NA	3	True	AATAAA	-30	NA	28336077	28324736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
WTC11_00078723	chr6	-	1813	5	FSM	ENSG00000204713.11	ENST00000414543.5	1813	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.764133086665	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28908989	28903001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28904666_28907235_28907263_28907491_28907564_28908807_28908841_28908972
WTC11_00078725	chr6	-	3772	16	NIC	ENSG00000204681.11	novel	4104	18	NA	NA	36	2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	47.8007903235454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCACCTTGCAGTCTTCCT	-29627339	False	NA	-6	True	AATAAA	-19	NA	29628002	29602232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
WTC11_00078726	chr6	-	3903	21	NIC	ENSG00000204681.11	novel	4299	22	NA	NA	41	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_18	50.5255133571149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCACCTTGCAGTCTTCCT	-29632230	True	NA	-6	True	AATAAA	-19	NA	29632893	29602232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300_29632386_29632849
WTC11_00078728	chr6	-	890	1	FSM	ENSG00000235238.1	ENST00000445436.1	284	1	9	-615	9	615	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAAGAAAAGTTATGC	NA	False	NA	NA	False	AATAAA	-24	NA	29636334	29635444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29635400_29636300
WTC11_00078729	chr6	-	423	1	FSM	ENSG00000233916.1	ENST00000435787.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGACCACTTGTTCATAA	NA	False	NA	NA	False	AATAGA	-5	NA	29708547	29708124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29708100_29708500
WTC11_00078730	chr6	-	912	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-59	403	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACATTTCTGGTCTGTG	-29748940	True	NA	NA	False	NA	NA	NA	29749028	29741327	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29741856_29745472_29745728_29748899
WTC11_00078731	chr6	-	995	1	FSM	ENSG00000230521.1	ENST00000420084.1	975	1	-91	71	-91	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCTTCACTTTTCATC	NA	False	NA	NA	False	AAGAAA	-22	NA	29888359	29887364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29887400_29888400
WTC11_00078732	chr6	-	861	1	FSM	ENSG00000227766.1	ENST00000429656.1	993	1	-293	425	-293	-425	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGACCGCGACGACACTGA	NA	False	NA	NA	False	NA	NA	NA	29943360	29942499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29942500_29943400
WTC11_00078733	chr6	-	751	1	FSM	ENSG00000237669.1	ENST00000458060.1	996	1	-10	255	-10	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCACCGCCTTCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	30007126	30006375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30006400_30007100
WTC11_00078734	chr6	-	3294	3	FSM	ENSG00000204623.10	ENST00000431012.5	3294	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGACTACTTTTGCT	NA	False	NA	NA	False	TATAAA	-16	NA	30061179	30054600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30057718_30058114_30058191_30061078
WTC11_00078735	chr6	-	502	4	FSM	ENSG00000234127.9	ENST00000487829.1	502	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.2660743091573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGACGGGAAGCTGCTG	-30211968	True	NA	NA	False	NA	NA	NA	30213365	30198763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30198991_30201034_30201139_30204655_30204766_30213304
WTC11_00078736	chr6	-	8759	1	FSM	ENSG00000280128.1	ENST00000624252.1	3706	1	-171	-4882	-171	4882	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGTCCTCTGTGA	NA	False	NA	0	True	AATAAA	-18	NA	30286225	30277466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30277500_30286200
WTC11_00078737	chr6	-	5268	5	NIC	ENSG00000231074.10	novel	4929	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	124.660288384072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326846	30286727	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30289495_30291536_30292600_30294470_30294965_30296131_30296238_30326008
WTC11_00078738	chr6	-	3981	3	FSM	ENSG00000231074.10	ENST00000602861.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	149.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTATACTAACATCTGAT	NA	False	NA	NA	False	NA	NA	NA	30327382	30291251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30327220
WTC11_00078741	chr6	-	3078	11	NNC	ENSG00000204569.10	novel	4511	20	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_9	76.5013071783744	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTTATTTAACCCCTA	-30605937	False	NA	-15	True	AATAAA	-14	NA	30605956	30600413	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604675_30604993_30605095_30605922
WTC11_00078742	chr6	-	1451	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	2	0	0	multi-exon	FALSE	canonical	3	10	junction_2	31.2018517968975	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	NA	False	NA	-10	True	AATAAA	-19	NA	30691002	30688048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
WTC11_00078743	chr6	-	6330	14	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	46	0	intron_retention	FALSE	canonical	3	19	junction_13	88.0922055938579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30717043	False	NA	-1	True	AATAAA	-19	NA	30717075	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711502_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30716881
WTC11_00078744	chr6	-	6663	14	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	42	0	intron_retention	FALSE	canonical	3	19	junction_13	83.7504040438898	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	30717405	30699806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30716881
WTC11_00078747	chr6	-	2829	2	NNC	ENSG00000237923.1	novel	799	3	NA	NA	7559	2050	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGGGAGAATAAATAAGG	-30840420	False	NA	NA	False	AATAAA	-42	NA	30840600	30837475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30840020_30840315
WTC11_00078748	chr6	-	2607	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	0	2050	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	9.28559218478941	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGGGAGAATAAATAAGG	NA	False	NA	NA	False	AATAAA	-42	NA	30848159	30837475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30843377_30843634_30847993
WTC11_00078751	chr6	-	1561	8	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1554	8	NA	NA	0	1	multi-exon	FALSE	canonical	3	45	junction_6	225.0224478598	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTTCGCTGTGCTGA	-31357094	True	NA	-4	True	AATAAA	-22	NA	31357179	31268747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31355316_31355593_31356166_31356443_31356687_31356958_31357085
WTC11_00078752	chr6	-	901	3	FSM	ENSG00000234745.13	ENST00000497377.5	917	3	22	-6	22	6	multi-exon	FALSE	canonical	3	278	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCTGTGCTGAGTCTG	-31354969	False	NA	0	True	AATAAA	-27	NA	31355054	31353865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31354297_31354478_31354527_31354632
WTC11_00078753	chr6	-	848	3	FSM	ENSG00000227507.3	ENST00000446745.2	853	3	7	-2	4	2	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCGACACACGTCTT	NA	False	NA	0	True	AATAAA	-35	NA	31582420	31580552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31581164_31581558_31581631_31582255
WTC11_00078755	chr6	-	3812	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	56	junction_13	106.812478671736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTCTCCATTAGGTA	-31651641	False	NA	-15	True	AATAAA	-29	NA	31652635	31639029	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
WTC11_00078756	chr6	-	3631	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	88.3331367922342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTCTCCATTAGGTA	-31651654	True	NA	-15	True	AATAAA	-29	NA	31652648	31639029	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
WTC11_00078757	chr6	-	1316	10	FSM	ENSG00000204427.12	ENST00000475742.5	1319	10	0	3	0	1	multi-exon	FALSE	canonical	3	212	junction_5	16.4909253010239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTAATTGTATAACTT	NA	False	NA	-2	True	AATAAA	-19	NA	31690602	31686957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31689120_31689580_31689705_31690077_31690128_31690538
WTC11_00078759	chr6	-	586	3	FSM	ENSG00000204421.3	ENST00000375819.3	893	3	32	275	32	-275	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCTGGGTCCCTTC	-31721635	False	NA	NA	False	NA	NA	NA	31721714	31718922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31719311_31720092_31720204_31721627
WTC11_00078760	chr6	-	4147	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	0	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.366140986572	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	-31795731	False	NA	NA	False	AAAAAG	-9	NA	31795752	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772612_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00078761	chr6	-	4356	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-208	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.874494962123	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	-31795939	False	NA	NA	False	AAAAAG	-9	NA	31795960	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772614_31777521_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792305_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
WTC11_00078762	chr6	-	894	6	NNC	ENSG00000204392.11	novel	858	5	NA	NA	0	24820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.826477748658	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAGATA	NA	False	NA	NA	False	AAAAAG	-9	NA	31806966	31772575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772612_31797395_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
WTC11_00078765	chr6	-	1399	9	NNC	ENSG00000204385.13	novel	2585	21	NA	NA	2511	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.93700393700591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	-31868663	False	NA	-19	True	ATTAAA	-23	NA	31868691	31863191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31868627
WTC11_00078766	chr6	-	397	3	FSM	ENSG00000204385.13	ENST00000475563.1	575	3	178	0	136	0	multi-exon	FALSE	canonical	2	8	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGTCCTCCTCCTCA	-31871024	False	NA	NA	False	NA	NA	NA	31871066	31869595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31869638_31870602_31870703_31870811
WTC11_00078767	chr6	-	485	6	FSM	ENSG00000204385.13	ENST00000465707.5	681	6	0	196	0	101	multi-exon	FALSE	canonical	2	7	junction_4	1.49666295470958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATATTGCCCCTAACCT	-31878936	False	NA	NA	False	AAAACA	-36	NA	31878997	31874720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
WTC11_00078768	chr6	-	3547	25	NIC	ENSG00000204371.11	novel	3940	26	NA	NA	92	0	intron_retention	FALSE	canonical	3	104	junction_9	209.344707593056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31896368	False	NA	NA	False	AATAAA	-20	NA	31896412	31879758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262
WTC11_00078769	chr6	-	1927	9	FSM	ENSG00000204356.14	ENST00000492185.5	1786	9	0	-141	0	1	multi-exon	FALSE	canonical	3	566	junction_8	99.5677376211793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCGCAGCTGTTTTA	NA	False	NA	-1	True	NA	NA	NA	31959038	31952085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
WTC11_00078770	chr6	-	1855	9	FSM	ENSG00000204356.14	ENST00000488426.5	1855	9	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_7	77.8182979767612	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-31950468	True	NA	-27	True	AGTAAA	-20	NA	31958919	31952227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371
WTC11_00078772	chr6	-	1392	7	NIC	ENSG00000204348.10	novel	1469	7	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	37.7083103130685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGCTGTCTTCTTAGC	NA	False	NA	-2	True	AATAAA	-19	NA	31972131	31969811	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971319_31971682_31971928
WTC11_00078773	chr6	-	2227	2	ISM	ENSG00000204348.10	ENST00000337523.10	1469	7	7	6	5	-4	intron_retention	FALSE	canonical	3	133	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGAGGTTCTCTCGCTGT	NA	False	NA	-11	True	AATAAA	-10	NA	31972131	31969820	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_31970025_31970108
WTC11_00078775	chr6	-	2605	14	FSM	ENSG00000168477.19	ENST00000490077.5	2756	14	151	0	151	0	multi-exon	FALSE	canonical	2	4	junction_13	7.21766406507071	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATCGGTCCTGCCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	32046456	32041154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32041451_32041770_32041935_32042011_32042174_32042265_32042363_32042454_32042607_32042698_32042832_32042950_32043082_32043174_32043319_32043436_32043557_32043748_32043893_32044006_32044130_32044380_32044717_32045005_32045327_32046174
WTC11_00078778	chr6	-	1418	11	FSM	ENSG00000204305.16	ENST00000375076.9	1420	11	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_10	6.00333240792145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTGTGTGTCTGTGTG	-32184212	False	NA	-8	True	ATTAAA	-15	NA	32184253	32180970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32181240_32181350_32181478_32181605_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183323_32183389_32183554_32183751_32183880_32183988_32184170
WTC11_00078779	chr6	-	742	4	FSM	ENSG00000242574.9	ENST00000414017.5	766	4	0	24	0	-17	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTTGGTGGAAATAT	NA	False	NA	-24	True	NA	NA	NA	32938688	32934652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32934988_32935535_32935653_32937171_32937457_32938683
WTC11_00078780	chr6	-	1331	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	17	0	-17	multi-exon	TRUE	canonical	1	3	junction_2	2.28035085019828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTTGGTGGAAATAT	NA	False	NA	-24	True	NA	NA	NA	32941028	32934652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
WTC11_00078781	chr6	-	1091	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	27.3895509273153	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGCTTCTTTCTTA	NA	False	NA	-3	True	AATAAA	-16	NA	32953096	32948615	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_32948869_32949273_32949400_32949610_32949890_32950518_32950804_32952948
WTC11_00078782	chr6	-	1117	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	10.3047319227625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGAGACTCTGAGTCAT	NA	False	NA	-7	True	AATAAA	-18	NA	33080767	33065013	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
WTC11_00078785	chr6	-	3789	36	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	17914	3	3340	-2	3prime_fragment	TRUE	canonical	2	3	junction_34	4.30377148319841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTCTGTGTCACTGC	NA	False	NA	-5	True	NA	NA	NA	33174553	33162696	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529_33172638_33173059_33173114_33173347_33173402_33173501_33173556_33173700_33173746_33173872_33173927_33174010_33174056_33174164_33174219_33174526
WTC11_00078796	chr6	-	4314	17	NNC	ENSG00000096063.16	novel	4348	16	NA	NA	0	11108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.872283005169	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTACACCAGTGCTGT	-35908012	True	NA	NA	False	NA	NA	NA	35921098	35821857	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35821892_35833033_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
WTC11_00078797	chr6	-	200	1	FSM	ENSG00000281450.1	ENST00000629595.1	1506	1	1116	190	1116	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGAGACCCCGGCTCC	-36673980	False	NA	NA	False	AATAGA	-32	NA	36674010	36673810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36673800_36674000
WTC11_00078799	chr6	-	8528	11	FSM	ENSG00000183826.18	ENST00000481247.6	8530	11	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	15.4857999470483	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGAGTCGTCACTCTCT	-38639281	True	NA	-2	True	AATAAA	-17	NA	38639929	38168452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_38175183_38192518_38192598_38256408_38256517_38288271_38288462_38344983_38345094_38577599_38577720_38580217_38580438_38592575_38592841_38593963_38594328_38597909_38598122_38639799
WTC11_00078800	chr6	-	3109	10	NIC	ENSG00000124615.20	novel	4143	11	NA	NA	1	-17	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	44.565668012856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCAGCTCTCTGGAAA	-39931885	True	NA	NA	False	NA	NA	NA	39934461	39905075	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_39907118_39909054_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
WTC11_00078801	chr6	-	2084	3	ISM	ENSG00000124602.10	ENST00000470102.1	644	5	2066	-1480	2066	2	3prime_fragment	FALSE	canonical	2	10	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATTGCCTTCCTTTGT	-41030911	False	NA	NA	False	ATTAAA	-40	NA	41030921	41026892	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_41028596_41030387_41030502_41030654
WTC11_00078802	chr6	-	1149	5	FSM	ENSG00000161911.12	ENST00000373127.8	1194	5	45	0	40	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAATGGCTGAATGGGA	-41154273	False	NA	NA	False	AATAAA	-21	NA	41154292	41149341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41149919_41150818_41150908_41151281_41151385_41153757_41154091_41154245
WTC11_00078803	chr6	-	406	2	FSM	ENSG00000234753.6	ENST00000439386.2	571	2	161	4	95	0	multi-exon	FALSE	canonical	3	7	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-41545819	False	NA	-11	True	ATTAAA	-28	NA	41546074	41523894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41524226_41545999
WTC11_00078804	chr6	-	2581	9	FSM	ENSG00000112561.19	ENST00000424495.2	3605	9	1024	0	535	0	multi-exon	FALSE	canonical	1	1	junction_8	4.2555111326373	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41733088	False	NA	0	True	AGTAAA	-15	NA	41733155	41683977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41732648
WTC11_00078805	chr6	-	2231	9	FSM	ENSG00000112561.19	ENST00000373033.6	2333	9	102	0	102	0	multi-exon	FALSE	canonical	1	4	junction_3	3.37036719067819	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41735439	False	NA	0	True	AGTAAA	-15	NA	41735506	41683977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41735349
WTC11_00078806	chr6	-	2183	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	5	0	5	0	multi-exon	FALSE	canonical	1	4	junction_3	3.73329613076702	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41736187	True	NA	0	True	AGTAAA	-15	NA	41736254	41683977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
WTC11_00078807	chr6	-	2014	6	NIC	ENSG00000048544.6	novel	2100	7	NA	NA	13	0	combination_of_known_splicesites	TRUE	canonical	3	61	junction_4	307.159632764463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210813	True	NA	-10	True	ATTAAA	-26	NA	42217848	42206806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214279_42214345_42217801
WTC11_00078808	chr6	-	7624	18	NNC	ENSG00000124496.12	novel	7646	18	NA	NA	-273	-7	intron_retention	FALSE	canonical	2	8	junction_17	31.988752348546	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTCGTTTGGCTTAAA	-42449869	True	NA	-17	True	AATAAA	-13	NA	42451534	42224937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42451518
WTC11_00078810	chr6	-	1408	11	ISM	ENSG00000124587.14	ENST00000304611.13	3444	17	10683	526	10652	-56	3prime_fragment	FALSE	canonical	2	9	junction_5	2.40831891575846	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGAGCTGCTCCGG	NA	False	NA	NA	False	NA	NA	NA	42968498	42964390	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289
WTC11_00078813	chr6	-	2438	2	ISM	ENSG00000044090.13	ENST00000683493.1	2552	5	1629	-102	771	80	intron_retention	FALSE	canonical	3	105	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATCATGAGGTCAGG	-43051943	False	NA	82	True	NA	NA	NA	43052025	43049018	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43050399_43050967
WTC11_00078814	chr6	-	2362	7	ISM	ENSG00000044090.13	ENST00000690231.1	5354	26	51	11388	0	80	5prime_fragment	FALSE	canonical	2	24	junction_6	30.8783455227482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATCATGAGGTCAGG	-43053769	False	5527	82	True	NA	NA	NA	43053851	43049018	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053710
WTC11_00078815	chr6	-	678	5	NNC	ENSG00000112667.13	novel	654	4	NA	NA	0	74842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	480.042706433501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTCTACATCCCTAAAA	-43219010	True	NA	NA	False	AAAAAG	-1	NA	43229478	43150786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43150814_43225628_43225882_43226032_43226144_43226326_43226396_43229260
WTC11_00078816	chr6	-	679	5	NNC	ENSG00000112667.13	novel	654	4	NA	NA	0	74842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	480.042706433501	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTCTACATCCCTAAAA	-43219010	True	NA	NA	False	AAAAAG	-1	NA	43229478	43150786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43150815_43225628_43225882_43226032_43226144_43226326_43226396_43229260
WTC11_00078817	chr6	-	1327	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	0	49361	intron_retention	FALSE	non_canonical	0	0	junction_1	88.2794727336001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCAGGCAGTTTTCA	-43305312	True	NA	NA	False	NA	NA	NA	43308797	43250348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43250374_43305471_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
WTC11_00078818	chr6	-	1016	9	NNC	ENSG00000146215.14	novel	991	8	NA	NA	0	49361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.8936630569551	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCAGGCAGTTTTCA	-43305341	True	NA	NA	False	NA	NA	NA	43308826	43250348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43250374_43305471_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
WTC11_00078819	chr6	-	1113	5	NIC	ENSG00000146215.14	novel	991	8	NA	NA	14	0	intron_retention	FALSE	canonical	3	10	junction_3	104.941352669003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305327	True	NA	-14	True	AATAAA	-14	NA	43308812	43305471	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43307838_43307897_43308314
WTC11_00078820	chr6	-	474	3	FSM	ENSG00000146215.14	ENST00000451294.5	474	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	103.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-43302976	False	NA	-4	True	CATAAA	-17	NA	43306461	43305512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43305876_43306218_43306314_43306445
WTC11_00078821	chr6	-	887	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.0995598917316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-43305339	True	NA	-4	True	CATAAA	-17	NA	43308824	43305512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
WTC11_00078822	chr6	-	1607	9	FSM	ENSG00000137207.12	ENST00000510102.5	1639	9	32	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	201.069639677401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACTGCAGCGGCTG	-43507067	True	NA	-41	True	ATTAAA	-13	NA	43516953	43511839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515605_43515702_43515888_43516188_43516726
WTC11_00078823	chr6	-	825	5	FSM	ENSG00000124571.18	ENST00000488195.6	868	5	43	0	43	0	multi-exon	FALSE	canonical	3	531	junction_4	15.2704780540755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGGTAGGTCATGCACC	-43527011	False	NA	NA	False	NA	NA	NA	43527021	43524476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684
WTC11_00078824	chr6	-	800	8	FSM	ENSG00000124571.18	ENST00000496341.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	155.615696181199	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCATCATCAAGATGTG	-43562320	False	NA	NA	False	NA	NA	NA	43562333	43549533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43560177_43560304_43560923_43561008_43562246
WTC11_00078825	chr6	-	5480	13	NNC	ENSG00000172432.19	novel	3031	12	NA	NA	-5	3617	intron_retention	TRUE	canonical	1	1	junction_1	20.092840073574	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCAAGTAGCAATCTAAT	-43626291	True	NA	NA	False	NA	NA	NA	43629269	43616864	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43617222_43618406_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
WTC11_00078826	chr6	-	1394	4	FSM	ENSG00000172432.19	ENST00000419497.5	1394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.1093529798922	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTATGCGTTAGCTA	-43622743	False	NA	NA	False	AATAAA	-19	NA	43622804	43620489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43621517_43621760_43621791_43622002_43622168_43622632
WTC11_00078827	chr6	-	2354	2	Genic_Genomic	ENSG00000287562.1	novel	4799	1	NA	NA	1844	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCTCATTGTGGTTTTT	NA	False	NA	-3	True	ATTAAA	-37	NA	44093741	44090788	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_44091434_44092032
WTC11_00078828	chr6	-	516	2	FSM	ENSG00000112796.10	ENST00000492313.1	725	2	0	209	0	-209	multi-exon	FALSE	canonical	3	76	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTATCATGTTTATTG	-46166088	False	NA	NA	False	NA	NA	NA	46167551	46165165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46165564_46167433
WTC11_00078829	chr6	-	437	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	-107	0	107	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATACTGCCAGGCATT	-47477497	False	NA	84	True	NA	NA	NA	47477572	47477135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_47477100_47477600
WTC11_00078830	chr6	-	1723	3	NNC	ENSG00000286811.1	novel	803	3	NA	NA	-93	-28045	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTCTTTGTTAT	-48109355	True	NA	NA	False	AATAAA	-16	NA	48111171	48097257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_48098799_48102126_48102186_48111048
WTC11_00078831	chr6	-	297	1	FSM	ENSG00000226068.1	ENST00000427514.1	803	1	173	333	173	-333	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGGAAAAAAGAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	48149832	48149535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_48149500_48149800
WTC11_00078832	chr6	-	402	1	FSM	ENSG00000216835.3	ENST00000408004.1	1191	1	105	684	105	-684	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGAGATCTGCACCAG	NA	False	NA	NA	False	NA	NA	NA	48214689	48214287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_48214300_48214700
WTC11_00078833	chr6	-	3441	14	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-51	35912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.4202461476308	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTTACTTGGACAAG	-49461080	True	NA	NA	False	NA	NA	NA	49463304	49394447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_49394475_49430742_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
WTC11_00078834	chr6	-	1655	5	FSM	ENSG00000170899.11	ENST00000486559.5	1698	5	43	0	43	0	multi-exon	FALSE	canonical	3	131	junction_3	15.8271917913444	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTGTGAGAATTT	-52986044	False	NA	-3	True	AATAAA	-22	NA	52987959	52977947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356
WTC11_00078835	chr6	-	6375	15	NNC	ENSG00000112144.16	novel	6146	14	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_14	12.8366900813605	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGAGTGTTCTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	53061929	53001302	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53045665_53045790_53061595
WTC11_00078837	chr6	-	13393	61	NIC	ENSG00000151914.22	novel	24709	104	NA	NA	-4888	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_58	78.7778504544407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAAACATATTCACTT	-56603390	False	NA	NA	False	NA	NA	NA	56603401	56458018	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56552183_56553656_56555344_56555841_56557318_56557519_56560293_56560424_56561307_56561550_56562137_56562201_56568468_56568596_56569855_56570013_56572099_56572267_56572746_56573065_56573678_56573888_56578813_56578938_56592181_56592359_56593662_56594194_56597739_56598007_56598475_56598710_56600068_56600222_56601442_56601677_56602881_56603032_56603204
WTC11_00078839	chr6	-	2567	18	FSM	ENSG00000151914.22	ENST00000523967.5	2904	18	138	199	138	-179	multi-exon	FALSE	canonical	0	0	junction_17	5.02863771133236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTTCAGTTCTCTG	-56851568	False	NA	NA	False	ATTAAA	-34	NA	56851579	56639114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56851396
WTC11_00078840	chr6	-	2546	7	FSM	ENSG00000112210.12	ENST00000317483.4	2546	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	56.5501252577452	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTCATTATATT	-57220602	False	NA	NA	False	AATAAA	-18	NA	57221407	57188782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221318
WTC11_00078841	chr6	-	5103	1	FSM	ENSG00000272316.1	ENST00000606125.1	5352	1	203	46	203	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGTATATAATTTTAAA	NA	False	NA	NA	False	AATGAA	-16	NA	57913708	57908605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57908600_57913700
WTC11_00078845	chr6	-	1163	1	FSM	ENSG00000218890.1	ENST00000402902.1	1479	1	291	25	291	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCGAAAAGTAAAGATG	NA	False	NA	NA	False	NA	NA	NA	66094618	66093455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_66093500_66094600
WTC11_00078846	chr6	-	2977	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	-20	0	0	multi-exon	FALSE	canonical	1	3	junction_14	21.7539507906035	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70282184	True	NA	-10	True	ATTAAA	-14	NA	70283105	70216039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
WTC11_00078848	chr6	-	1048	6	NIC	ENSG00000135314.13	novel	1430	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	14.2772546380598	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73310395	False	NA	-3	True	AATAAA	-22	NA	73310410	73241313	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551_73309729_73310305
WTC11_00078850	chr6	-	2609	4	FSM	ENSG00000111799.22	ENST00000680981.1	2782	4	161	12	161	-12	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTCTGAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75090298	75084377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75086558_75087576_75087748_75089105_75089175_75090109
WTC11_00078851	chr6	-	3721	3	NNC	ENSG00000118407.15	novel	3764	3	NA	NA	356	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	9.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAAGAACAGAGTTTTA	-75334299	False	135	-5	True	AATAAA	-19	NA	75334434	75308090	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_75308898_75312396_75315203_75334326
WTC11_00078852	chr6	-	913	7	NNC	ENSG00000118418.14	novel	872	6	NA	NA	0	357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1933.54174164063	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGCTCAACTTTGAAAAT	-79191886	True	NA	NA	False	AGTAAA	-39	NA	79234689	79200887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200929_79201244_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00078854	chr6	-	1295	6	NIC	ENSG00000118418.14	novel	1010	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	77	junction_1	1925.44239072479	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191880	True	NA	-6	True	AATAAA	-21	NA	79234683	79201244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
WTC11_00078855	chr6	-	5561	3	FSM	ENSG00000112773.16	ENST00000369756.3	5537	3	52	-76	-14	76	multi-exon	FALSE	canonical	1	9	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAGCGGTACATAGAG	-81752490	True	NA	76	True	ACTAAA	-40	NA	81752722	81745653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_81750472_81751589_81752179_81752568
WTC11_00078856	chr6	-	4109	28	FSM	ENSG00000005700.15	ENST00000510291.5	4109	28	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	22.4794983566112	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATGCATTTTACATAAT	-82238992	False	NA	NA	False	NA	NA	NA	82240565	82171411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196402_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165
WTC11_00078857	chr6	-	3166	5	ISM	ENSG00000118420.17	ENST00000369747.8	1925	10	39772	0	31900	0	3prime_fragment	FALSE	canonical	3	111	junction_2	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	NA	False	NA	0	True	AATAAA	-24	NA	83026069	82892389	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968
WTC11_00078859	chr6	-	1342	11	FSM	ENSG00000118420.17	ENST00000430071.6	1352	11	10	0	-6	0	multi-exon	FALSE	canonical	2	3	junction_8	43.9881802306029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATTAGAGCTGGGCAT	-83062901	True	NA	NA	False	NA	NA	NA	83065829	82893024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83049708_83049773_83054147_83054239_83057825_83058023_83065641
WTC11_00078860	chr6	-	3206	6	FSM	ENSG00000118420.17	ENST00000505226.1	3255	6	0	49	0	-49	multi-exon	FALSE	canonical	0	0	junction_4	50.91718766782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTGAGCAACAGGGC	-83062895	True	NA	NA	False	NA	NA	NA	83065823	83036074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
WTC11_00078862	chr6	-	1053	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	827	-24	827	24	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTATTCATTCAGCTAC	-83853317	False	NA	NA	False	NA	NA	NA	83853340	83852287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83852300_83853300
WTC11_00078863	chr6	-	4809	26	NNC	ENSG00000135315.12	novel	5155	27	NA	NA	-276	263	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	10.9036507647668	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGTATTGAATAATGGTG	NA	False	NA	NA	False	TTTAAA	-45	NA	84227919	84124691	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_84125277_84126377_84126513_84146686_84146786_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169396_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
WTC11_00078864	chr6	-	4129	29	FSM	ENSG00000135317.14	ENST00000682171.1	4157	29	0	28	0	-28	multi-exon	FALSE	canonical	3	46	junction_27	59.7717917736848	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATTTTGAATGTTATT	-85594086	False	NA	NA	False	TTTAAA	-4	NA	85594101	85504803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593833
WTC11_00078867	chr6	-	3431	29	FSM	ENSG00000135317.14	ENST00000515216.6	3426	29	0	-5	0	0	multi-exon	FALSE	canonical	1	2	junction_2	55.2347841269523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTATATGAGTTTTTAA	-85593882	False	NA	NA	False	AATAAA	-2	NA	85593897	85505522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507257_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
WTC11_00078868	chr6	-	5327	26	NIC	ENSG00000135317.14	novel	3193	29	NA	NA	2182	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	74.2708125712921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	-85591521	False	NA	-11	True	AATAAA	-31	NA	85591536	85505797	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85572136_85572216_85572297_85572375_85574257_85574379_85588862
WTC11_00078872	chr6	-	632	5	FSM	ENSG00000203875.13	ENST00000624295.3	632	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2970.34656016769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTCCTTTTTGTTAT	-85678395	False	NA	-13	True	AATAAA	-15	NA	85678405	85677082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135
WTC11_00078873	chr6	-	2144	22	NNC	ENSG00000146282.19	novel	2437	22	NA	NA	0	23923	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169.116846991978	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACAGTTGAGCAGGCTG	-87583435	True	NA	NA	False	NA	NA	NA	87589987	87489535	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_87489561_87513941_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
WTC11_00078874	chr6	-	2312	21	FSM	ENSG00000146282.19	ENST00000691725.1	2339	21	41	-14	0	4	multi-exon	FALSE	canonical	3	27	junction_1	129.276167563863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTATCAATTTTCT	-87583435	True	NA	-9	True	AATAAA	-15	NA	87589987	87513748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
WTC11_00078875	chr6	-	2292	21	NIC	ENSG00000146282.19	novel	2361	21	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	172.091625304661	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583387	True	NA	-5	True	AATAAA	-14	NA	87589939	87513937	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520253_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
WTC11_00078876	chr6	-	2265	20	NIC	ENSG00000146282.19	novel	2361	21	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	181.52658283846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTCATGGTCAGTAGG	-87583413	True	NA	-6	True	AATAAA	-13	NA	87589965	87513938	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
WTC11_00078877	chr6	-	6561	17	FSM	ENSG00000135333.15	ENST00000680224.1	6620	17	0	59	0	-54	multi-exon	FALSE	canonical	2	8	junction_8	10.4490953555798	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTCAACATGAATCATA	-93417956	True	NA	NA	False	NA	NA	NA	93419588	93240096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259468_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
WTC11_00078878	chr6	-	5031	3	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	189.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACCATCAGAAATTACAT	-93831555	True	NA	NA	False	ATTAAA	-45	NA	93835388	93826631	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_93831323_93833261_93833364_93835150
WTC11_00078879	chr6	-	4497	9	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.6728634313366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGTTTGTCTGTGTTGG	-97280300	False	NA	1	True	AATAAA	-20	NA	97282511	97258657	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313
WTC11_00078880	chr6	-	2185	10	NIC	ENSG00000146263.12	novel	5907	7	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_9	27.3310748841129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-97280993	True	NA	-4	True	AATAAA	-15	NA	97283204	97258662	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_97259670_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283044
WTC11_00078882	chr6	-	3865	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGTCTGTGAGAGTC	-97781355	False	NA	-3	True	ATTAAA	-19	NA	97781454	97772118	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_97775730_97781200
WTC11_00078883	chr6	-	1530	6	NNC	ENSG00000146267.12	novel	11528	6	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	29.5675497801221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	-99349861	False	NA	-41	True	AATAAA	-14	NA	99349901	99280666	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99281454_99291703_99291821_99333350_99333548_99342897_99343034_99349106_99349229_99349730
WTC11_00078885	chr6	-	2162	13	NIC	ENSG00000123552.18	novel	1741	14	NA	NA	0	492	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	35.5176012703561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCCAATAGTTCAACT	-99510217	False	NA	NA	False	CATAAA	-36	NA	99510230	99461971	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
WTC11_00078886	chr6	-	2099	7	NNC	ENSG00000123552.18	novel	1444	8	NA	NA	2	758	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	45.2953272056475	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTAGGTCATTGTATG	-99510215	False	NA	NA	False	AATAAA	-22	NA	99510228	99481503	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508780_99510120
WTC11_00078888	chr6	-	2140	13	NNC	ENSG00000112237.13	novel	2212	13	NA	NA	0	12231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.595273470074	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGTGGTGGCTCAC	-99558738	True	NA	NA	False	NA	NA	NA	99568623	99530155	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99530181_99542387_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00078889	chr6	-	4378	13	FSM	ENSG00000112237.13	ENST00000326298.8	2212	13	0	-2166	0	2166	multi-exon	FALSE	canonical	1	1	junction_4	499.66741021737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTGAACACTTATT	-99558746	True	NA	NA	False	NA	NA	NA	99568631	99540220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549311_99549400_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
WTC11_00078891	chr6	-	240	3	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	9	junction_1	37	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGCCCCGTAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	102294184	102293835	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_102293906_102293947_102294031_102294097
WTC11_00078892	chr6	-	4597	25	NIC	ENSG00000085382.12	novel	4729	26	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	32.0775968897644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCTTATGTCTGTA	-104857006	True	NA	-7	True	AATAAA	-17	NA	104859859	104728092	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777098_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104824813_104824908_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
WTC11_00078893	chr6	-	4623	25	NIC	ENSG00000085382.12	novel	4729	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	31.4773948872661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGTGGCTTATGTCT	-104857024	True	NA	-10	True	AATAAA	-14	NA	104859877	104728095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777098_104777205_104777318_104780352_104780458_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
WTC11_00078894	chr6	-	580	4	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	-52	-1793	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.816496580927726	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCATATGGTTGATGG	-104940244	True	NA	1	True	AATAAA	-29	NA	104940426	104926493	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_104926883_104931478_104931547_104940177_104940214_104940339
WTC11_00078895	chr6	-	5533	9	NNC	ENSG00000112276.14	novel	5550	8	NA	NA	-9	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.42995165724337	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGTATTTTTTAT	-105136945	True	NA	0	True	AATAAA	-13	NA	105137166	105096825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_105100549_105100570_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136968
WTC11_00078897	chr6	-	583	4	FSM	ENSG00000025796.14	ENST00000446496.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	204.119790537049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTATTTTTATATA	-107945300	True	NA	NA	False	ATTAAA	-11	NA	107958111	107924817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107924933_107929414_107929515_107955964_107956107_107957885
WTC11_00078898	chr6	-	437	1	FSM	ENSG00000271734.1	ENST00000607298.1	470	1	-71	104	-71	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTCTATCTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	108030789	108030352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108030400_108030800
WTC11_00078902	chr6	-	2410	7	FSM	ENSG00000135535.17	ENST00000413644.6	2414	7	0	4	0	0	multi-exon	FALSE	canonical	1	1	junction_1	282.254465568454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373307	True	NA	-4	True	AATAAA	-18	NA	109382457	109366517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109368326_109368921_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
WTC11_00078903	chr6	-	4856	24	ISM	ENSG00000135596.18	ENST00000358807.8	3430	25	50	3	0	0	intron_retention	FALSE	canonical	3	129	junction_19	44.0728903038518	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCGTTCACACCGCCT	-109453541	True	NA	-4	True	ATTAAA	-14	NA	109455722	109444064	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938
WTC11_00078904	chr6	-	3165	12	NIC	ENSG00000155085.16	novel	2566	12	NA	NA	44	-17	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	10.7095384996756	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTGGAGTAAATAACAC	-109690919	False	NA	NA	False	AATAAA	-15	NA	109691158	109631709	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109690471
WTC11_00078905	chr6	-	2654	10	NIC	ENSG00000112290.13	novel	2815	11	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	116.218185610801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110179985	110099818	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110179840
WTC11_00078907	chr6	-	819	1	FSM	ENSG00000225580.2	ENST00000418595.1	1178	1	382	-23	382	23	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCTGCCTCATCCCC	NA	False	NA	NA	False	AAGAAA	-41	NA	112617498	112616679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112616700_112617500
WTC11_00078909	chr6	-	1640	2	Antisense	novelGene_ENSG00000228624.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAAGTTTTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	114409681	114400707	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_114402273_114409606
WTC11_00078910	chr6	-	505	1	FSM	ENSG00000218428.1	ENST00000404319.1	515	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGTCACTGCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	116137562	116137057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116137100_116137600
WTC11_00078911	chr6	-	4483	8	NNC	ENSG00000047932.14	novel	4590	8	NA	NA	33	-48	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	49.9726455785808	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTGATCTCATTTTTT	-117596639	True	NA	-13	True	AATAAA	-23	NA	117602478	117560319	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579059_117602003
WTC11_00078913	chr6	-	3416	30	NIC	ENSG00000146350.14	novel	4431	33	NA	NA	5	-676	combination_of_known_junctions	TRUE	canonical	1	4	junction_29	3.7698345844735	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTTTTGAGTATATT	-121334417	True	NA	NA	False	CATAAA	-12	NA	121334740	121113061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121160009_121160104_121160947_121161057_121170404_121170528_121205074_121205164_121223235_121223353_121239069_121239189_121241464_121241553_121242200_121242340_121255327_121255411_121256083_121256286_121279120_121279246_121281543_121281687_121283817_121283911_121292052_121292194_121294569_121294661_121299445_121299506_121303616_121303762_121304364_121304427_121304521_121304626_121304754_121304834_121307975_121308102_121310778_121310848_121317494_121317673_121321632_121321795_121334275_121334432_121334617
WTC11_00078915	chr6	-	1820	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTGAAATAAACAGCCAT	-121622288	False	NA	-31	True	NA	NA	NA	121622311	121620491	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_121620500_121622300
WTC11_00078916	chr6	-	265	2	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTTCCCAGATCTTCT	-121625773	True	NA	NA	False	NA	NA	NA	121625796	121623737	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_121623911_121625704
WTC11_00078917	chr6	-	3155	11	NNC	ENSG00000111897.7	novel	3125	10	NA	NA	0	22650	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.258914815591	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAATAAACTAAATCG	-122468991	True	NA	NA	False	NA	NA	NA	122471807	122420700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_122420730_122443349_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
WTC11_00078918	chr6	-	3193	11	NNC	ENSG00000111897.7	novel	3125	10	NA	NA	-35	22650	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.258914815591	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAATAAACTAAATCG	-122469026	True	NA	NA	False	NA	NA	NA	122471842	122420700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_122420730_122443346_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
WTC11_00078919	chr6	-	2436	1	FSM	ENSG00000279453.1	ENST00000624649.1	2435	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTGTCCACTCAT	-122439208	False	NA	-5	True	AATAAA	-20	NA	122439223	122436787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_122436800_122439200
WTC11_00078920	chr6	-	251	1	FSM	ENSG00000232362.1	ENST00000440646.1	311	1	137	-77	137	77	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAATAAGATTTGTC	NA	False	NA	NA	False	NA	NA	NA	122859851	122859600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_122859600_122859900
WTC11_00078921	chr6	-	3428	1	FSM	ENSG00000111906.18	ENST00000609021.1	3529	1	107	-6	107	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATATTTATTGGAGAT	NA	False	NA	-28	True	AATAAA	-23	NA	125279307	125275879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125275900_125279300
WTC11_00078931	chr6	-	4193	18	NIC	ENSG00000079819.19	novel	4186	18	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	13	junction_6	127.596330391637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGTCACTTCTCTTT	-131057538	True	NA	-7	True	AATAAA	-15	NA	131063304	130839350	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_130840599_130858130_130858244_130863637_130863719_130867458_130867582_130869562_130870127_130870327_130870382_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
WTC11_00078935	chr6	-	3696	10	NIC	ENSG00000079950.14	novel	15845	10	NA	NA	22	3845	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	64.4222183894829	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTATTTTTTTTGAAA	-132508591	True	NA	9	True	NA	NA	NA	132513094	132457868	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503515_132513057
WTC11_00078969	chr6	-	3164	15	NNC	ENSG00000092820.19	novel	3052	14	NA	NA	-78	9021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1179.83085089969	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTGAGACAGGATC	NA	False	NA	NA	False	ACTAAA	-27	NA	158819446	158756719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158756749_158765742_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
WTC11_00078980	chr6	-	1929	10	NIC	ENSG00000184465.16	novel	2554	16	NA	NA	-10	0	intron_retention	FALSE	canonical	2	10	junction_6	70.6301443007914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	-169701664	False	NA	-7	True	AATAAA	-20	NA	169701864	169657761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169663562_169663707_169664165_169664287_169672254_169672397_169688816_169689013_169701550
WTC11_00078985	chr6	+	1040	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCCTGAACTAACTTG	14298467	False	NA	NA	False	AAAACA	-16	NA	14298506	14299546	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14298500_14299500
WTC11_00078986	chr6	+	439	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTGGGGAGTTCTAAGA	NA	False	NA	NA	False	AAAAAG	-35	NA	21364110	21364549	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21364100_21364500
WTC11_00078987	chr6	+	314	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCCAAACGAGTCATGA	NA	False	NA	NA	False	NA	NA	NA	21364964	21365278	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21365000_21365300
WTC11_00078989	chr6	+	2373	1	Genic_Genomic	ENSG00000243753.6	novel	NA	NA	NA	NA	12823	40	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCACCTGCAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	30272447	30274820	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_30272400_30274800
WTC11_00078990	chr6	+	817	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGGAATTGGTGGATAA	NA	False	NA	NA	False	NA	NA	NA	39183931	39184748	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_39183900_39184700
WTC11_00078991	chr6	+	6639	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTTTGACAAATTAAAGA	NA	False	NA	NA	False	AATGAA	-27	NA	48072682	48079321	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_48072700_48079300
WTC11_00078992	chr6	+	1977	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	56823532	56825509	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_56823500_56825500
WTC11_00078993	chr6	+	277	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCCTGGCCGCTGCAGT	90673305	True	NA	NA	False	NA	NA	NA	90673427	90673704	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90673400_90673700
WTC11_00078994	chr6	+	314	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCCCGCCGCCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	99515770	99516084	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_99515800_99516100
WTC11_00078995	chr6	+	1207	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTACCATCTCATTAAA	NA	False	NA	NA	False	NA	NA	NA	115033610	115034817	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_115033600_115034800
WTC11_00078996	chr6	+	296	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACCTTAACTGATGACA	NA	False	NA	NA	False	NA	NA	NA	115036983	115037279	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_115037000_115037300
WTC11_00078997	chr6	+	519	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGTGACAGCGTGCTG	NA	False	NA	NA	False	NA	NA	NA	124891272	124891791	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_124891300_124891800
WTC11_00079002	chr7	+	2170	2	FSM	ENSG00000240859.3	ENST00000664368.1	2577	2	89	318	57	109	multi-exon	FALSE	canonical	2	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAGGTTTACTTACCTC	NA	False	NA	NA	False	NA	NA	NA	149653	155099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150133_153408
WTC11_00079003	chr7	+	5552	3	NNC	ENSG00000177706.9	novel	3176	10	NA	NA	-557	3139	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	49	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTGGCGAAAGTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	192013	200714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_193805_195553_195733_197132
WTC11_00079004	chr7	+	6952	2	ISM	ENSG00000177706.9	ENST00000313766.6	3176	10	-557	60058	-557	3139	5prime_fragment	FALSE	canonical	3	108	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTGGCGAAAGTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	192013	200714	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_193805_195553
WTC11_00079005	chr7	+	3706	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	-557	27	-557	0	multi-exon	TRUE	canonical	3	79	junction_5	10.9284993830549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCCTCACGGGGCGGG	NA	False	NA	22	True	AATAAA	-16	NA	192013	260745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
WTC11_00079006	chr7	+	666	3	NIC	ENSG00000177706.9	novel	554	2	NA	NA	1193	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCATGTGAGCAAGCTT	193752	True	NA	NA	False	NA	NA	NA	193763	197575	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_193805_195553_195733_197129
WTC11_00079007	chr7	+	3421	13	FSM	ENSG00000164818.16	ENST00000297440.11	3412	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	314	junction_1	44.2099630551003	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	722469	True	NA	14	True	ATTAAA	-15	NA	726689	786475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
WTC11_00079008	chr7	+	585	5	FSM	ENSG00000164818.16	ENST00000437419.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	151.92185491232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGAGCTCGTCGGGACGT	727028	False	NA	NA	False	NA	NA	NA	727218	756792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_740818_740944_741346_741466_754588_754822_756781
WTC11_00079009	chr7	+	579	5	FSM	ENSG00000164818.16	ENST00000438961.1	579	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	147.838594419725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACATGGTGAAACCCCA	727179	True	NA	NA	False	NA	NA	NA	727251	750953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_750867
WTC11_00079010	chr7	+	2353	13	FSM	ENSG00000164818.16	ENST00000440747.5	2350	13	-3	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	111.714541975917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAAGCCAAAG	727179	True	NA	NA	False	NA	NA	NA	727251	786031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_729724_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
WTC11_00079013	chr7	+	3850	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	-41	3	-41	0	multi-exon	FALSE	canonical	3	150	junction_5	119.132707835105	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	816558	False	NA	6	True	AATAAA	-19	NA	816573	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079015	chr7	+	3721	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	-4	0	-4	0	multi-exon	FALSE	canonical	2	61	junction_4	143.564445459173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	806876	True	NA	27	True	AATAAA	-40	NA	816610	874920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079016	chr7	+	4665	21	FSM	ENSG00000164828.18	ENST00000413171.6	4488	21	-180	3	-155	0	multi-exon	FALSE	canonical	3	82	junction_7	154.954598189276	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	6	True	AATAAA	-19	NA	832320	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079017	chr7	+	4004	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	-19	25	-19	7	multi-exon	FALSE	canonical	3	106	junction_5	115.202947600322	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACAGTCTATTTCTTT	NA	False	NA	16	True	AATAAA	-29	NA	832456	874909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079020	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	100.465525426924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	NA	False	NA	27	True	AATAAA	-40	NA	832504	874920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079021	chr7	+	4337	22	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_7	153.982771365991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	NA	False	NA	6	True	AATAAA	-19	NA	832506	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00079030	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	37.1397277184419	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	870792	True	NA	8	True	AATAAA	-16	NA	876553	896436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
WTC11_00079031	chr7	+	4356	8	FSM	ENSG00000239857.7	ENST00000407192.5	4356	8	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	32.0127525609813	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	883529	False	NA	8	True	AATAAA	-16	NA	883542	896436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
WTC11_00079033	chr7	+	367	3	FSM	ENSG00000239857.7	ENST00000483469.1	370	3	0	3	0	-3	multi-exon	FALSE	canonical	3	679	junction_2	20	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTGGTGTGGATAGCT	887466	True	NA	NA	False	GGGGCT	-21	NA	887485	892471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_887520_890927_891067_892277
WTC11_00079034	chr7	+	1863	2	FSM	ENSG00000164849.10	ENST00000444847.2	1883	2	18	2	18	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAGGATTTCTGACTG	1044500	True	NA	6	True	AATAAA	-12	NA	1044563	1059259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1044659_1057491
WTC11_00079035	chr7	+	1984	3	FSM	ENSG00000229043.3	ENST00000423008.2	1714	3	0	-270	0	243	multi-exon	FALSE	canonical	3	10	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAGGCTAGGAATGTAA	1159516	True	NA	NA	False	NA	NA	NA	1160373	1165850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1163451_1163496_1164160
WTC11_00079036	chr7	+	1780	4	FSM	ENSG00000229043.3	ENST00000655003.1	1765	4	-15	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	28.1780056072107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	1159723	False	NA	-19	True	NA	NA	NA	1160580	1165607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1162961_1163208_1163451_1163496_1164160
WTC11_00079037	chr7	+	4484	2	FSM	ENSG00000229043.3	ENST00000660500.1	4484	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACATGGTGAAACCC	1159574	True	NA	-46	True	NA	NA	NA	1160431	1165580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1163496_1164160
WTC11_00079038	chr7	+	1629	3	FSM	ENSG00000229043.3	ENST00000659975.1	1629	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	18	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATGGATGCAGAGTTC	1159723	False	NA	NA	False	NA	NA	NA	1160580	1165212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1162961_1163496_1164160
WTC11_00079039	chr7	+	3375	3	FSM	ENSG00000198517.10	ENST00000343242.9	3380	3	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGTTGCGTAGCTGG	1529299	True	NA	24	True	AATAAA	-19	NA	1530706	1543043	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1530899_1539148_1539229_1539940
WTC11_00079040	chr7	+	3828	3	ISM	ENSG00000225968.8	ENST00000424383.5	3976	4	17842	9	17842	-9	3prime_fragment	FALSE	canonical	3	8	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCAAATGCTTGTTTGT	NA	False	NA	NA	False	AAAAAG	-37	NA	1688118	1747937	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_1688151_1709090_1709253_1744303
WTC11_00079041	chr7	+	674	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	328	junction_1	362.409528940212	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2242197	False	NA	15	True	AATAAA	-15	NA	2242209	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
WTC11_00079042	chr7	+	754	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	-42	0	-9	0	multi-exon	FALSE	canonical	3	52	junction_1	473.921604804001	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234672	True	NA	15	True	AATAAA	-15	NA	2242216	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
WTC11_00079043	chr7	+	725	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_1	441.356644336527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2242197	False	NA	15	True	AATAAA	-15	NA	2242209	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
WTC11_00079044	chr7	+	770	5	NIC	ENSG00000106268.16	novel	771	4	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	487.401528516274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234693	True	NA	15	True	AATAAA	-15	NA	2242237	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2242257_2242924_2243049_2244562_2244727_2249856_2250003_2250828
WTC11_00079045	chr7	+	771	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	478.882263424135	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
WTC11_00079046	chr7	+	3095	19	FSM	ENSG00000106263.19	ENST00000360876.9	3096	19	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_11	621.017516800323	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGGTCTTTCTCCTCTCTT	2322413	True	NA	29	True	AATAAA	-19	NA	2354826	2380744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
WTC11_00079047	chr7	+	2944	20	NIC	ENSG00000106263.19	novel	3096	19	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	738.010937618354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2322443	True	NA	25	True	AATAAA	-15	NA	2354856	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
WTC11_00079049	chr7	+	2981	19	FSM	ENSG00000106263.19	ENST00000397011.2	2966	19	-15	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	658.388035702013	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2322453	True	NA	30	True	AATAAA	-20	NA	2354866	2380745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
WTC11_00079050	chr7	+	2755	19	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	199	-2	intron_retention	FALSE	canonical	0	0	junction_11	749.422147761564	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAACCGGTCTTTCTCC	2354858	False	NA	23	True	AATAAA	-13	NA	2355080	2380738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380283
WTC11_00079055	chr7	+	3745	5	FSM	ENSG00000106263.19	ENST00000475415.5	3745	5	0	0	0	0	multi-exon	FALSE	canonical	3	1609	junction_4	434.428935500388	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2373054	False	NA	25	True	AATAAA	-15	NA	2373117	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2375528_2376949_2377076_2378688_2379243_2379393_2379512_2380203
WTC11_00079057	chr7	+	2766	2	FSM	ENSG00000106263.19	ENST00000465670.1	2766	2	0	0	0	0	multi-exon	FALSE	canonical	3	2644	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2377759	False	NA	25	True	AATAAA	-15	NA	2377823	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2379243_2379393
WTC11_00079059	chr7	+	15963	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	-22	38	-22	-38	multi-exon	FALSE	canonical	3	87	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGCTGGATCTCAGTA	2401677	True	NA	NA	False	NA	NA	NA	2403565	2448445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2403646_2432562
WTC11_00079060	chr7	+	2446	8	FSM	ENSG00000106003.14	ENST00000222725.10	2445	8	-3	2	-3	0	multi-exon	FALSE	canonical	3	21	junction_2	5.30306034093445	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGGGGGTCCTGGTCT	2515881	True	NA	6	True	AATAAA	-16	NA	2519770	2528427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2520294_2524694_2524744_2525218_2525319_2525413_2525568_2525684_2525771_2526243_2526410_2526835_2526922_2527145
WTC11_00079061	chr7	+	6737	20	FSM	ENSG00000106012.18	ENST00000623361.3	6775	20	38	0	-11	0	multi-exon	TRUE	canonical	2	4	junction_1	5.06249038164676	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCGTGAAGACTTCT	2558570	True	NA	14	True	AATAAA	-24	NA	2559009	2614733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
WTC11_00079065	chr7	+	2400	21	FSM	ENSG00000106012.18	ENST00000476665.5	2400	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	4.96462485994662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTACTTTGTTAAA	2558639	True	NA	NA	False	AGTAAA	-15	NA	2559078	2607555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
WTC11_00079067	chr7	+	4803	14	FSM	ENSG00000136295.15	ENST00000258796.12	4805	14	0	2	0	0	multi-exon	FALSE	canonical	3	1133	junction_5	102.710600502681	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCTTCCTGAGCTG	2622786	True	NA	16	True	AATAAA	-12	NA	2631985	2664800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
WTC11_00079072	chr7	+	337	3	FSM	ENSG00000174945.14	ENST00000480560.5	583	3	246	0	192	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAAGTCGGGGCCCAGCG	NA	False	NA	NA	False	NA	NA	NA	2702721	2709114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2702890_2708587_2708717_2709074
WTC11_00079073	chr7	+	428	1	FSM	ENSG00000224593.1	ENST00000430569.1	476	1	124	-76	124	76	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGGGGAGAG	NA	False	NA	NA	False	AAGAAA	-23	NA	3338249	3338677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3338200_3338700
WTC11_00079075	chr7	+	11218	9	FSM	ENSG00000164916.11	ENST00000328914.5	11194	9	-24	0	-24	0	multi-exon	TRUE	canonical	3	16	junction_7	6.20483682299543	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCGGCTCCGGTGTGGT	4681516	True	NA	13	True	AATAAA	-21	NA	4682270	4771442	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4682869_4740837_4741024_4754458_4754616_4755236_4755384_4756993_4757188_4759050_4759218_4759310_4759596_4761063_4761289_4762183
WTC11_00079076	chr7	+	758	2	FSM	ENSG00000164916.11	ENST00000460979.2	758	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAATGGTTGTTCCTAG	NA	False	NA	NA	False	AATAAA	-24	NA	4740858	4755051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4741024_4754458
WTC11_00079079	chr7	+	2250	16	ISM	ENSG00000242802.9	ENST00000649063.2	5529	17	-5	3511	3	0	5prime_fragment	FALSE	canonical	3	102	junction_7	11.0827192812354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTGGTCAGGGAGGGA	4772300	True	NA	NA	False	NA	NA	NA	4775617	4790886	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672
WTC11_00079080	chr7	+	2859	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	-13	2683	-5	0	multi-exon	TRUE	canonical	3	102	junction_7	11.5101857065818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	4772292	True	NA	-23	True	NA	NA	NA	4775609	4791714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
WTC11_00079081	chr7	+	2889	17	FSM	ENSG00000242802.9	ENST00000650310.1	2869	17	-20	0	3	0	multi-exon	FALSE	canonical	2	3	junction_10	30.9898546906887	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	4772300	True	NA	-23	True	NA	NA	NA	4775617	4791714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787595_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
WTC11_00079088	chr7	+	2114	4	FSM	ENSG00000242802.9	ENST00000469614.1	2337	4	223	0	223	0	multi-exon	FALSE	canonical	3	117	junction_2	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCGTCTGTATGAAGA	4788436	False	NA	13	True	AGTAAA	-15	NA	4788448	4791750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4788952_4789831_4790592_4790672_4790888_4791114
WTC11_00079089	chr7	+	566	3	FSM	ENSG00000196204.12	ENST00000477090.5	566	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTATTTCTCCTGGTT	4970029	True	NA	NA	False	NA	NA	NA	4974015	4996893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4974162_4976300_4976437_4996609
WTC11_00079090	chr7	+	2222	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.2910819216967	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970029	True	NA	13	True	ATTAAA	-16	NA	4974015	4998165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
WTC11_00079092	chr7	+	2290	7	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	86.9418707464297	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACCTAGTCTGTGTCAT	4970068	True	NA	12	True	ATTAAA	-15	NA	4974054	4998164	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
WTC11_00079097	chr7	+	6619	5	FSM	ENSG00000146587.18	ENST00000396912.2	6612	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	32	junction_1	13.5185058345958	2830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGTTTTTTGCATTTC	5044164	True	NA	NA	False	AATAAA	-35	NA	5045852	5069487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
WTC11_00079098	chr7	+	433	3	FSM	ENSG00000146587.18	ENST00000476992.1	712	3	279	0	279	0	multi-exon	FALSE	canonical	3	56	junction_2	5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAGAATTTAGAATCTA	NA	False	NA	62	True	NA	NA	NA	5057265	5063875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5057422_5057683_5057780_5063694
WTC11_00079100	chr7	+	2294	12	FSM	ENSG00000157954.15	ENST00000401525.7	2112	12	17	-199	17	0	multi-exon	FALSE	canonical	3	211	junction_1	63.6893286078005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCCTGTTGAAAAACT	5186230	True	NA	9	True	ATTAAA	-20	NA	5190212	5231723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
WTC11_00079101	chr7	+	1676	13	FSM	ENSG00000157954.15	ENST00000404704.7	1663	13	-13	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	98.0383640894386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGAGGAAATACATCATT	5186250	True	NA	-27	True	ATTAAA	-38	NA	5190232	5231104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
WTC11_00079102	chr7	+	4465	13	FSM	ENSG00000157954.15	ENST00000288828.9	4445	13	-20	0	17	0	multi-exon	FALSE	canonical	3	158	junction_1	87.7798698766155	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATTTTTATTCAGTTCT	5186230	True	NA	8	True	AATAAA	-34	NA	5190212	5233840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
WTC11_00079104	chr7	+	1962	12	FSM	ENSG00000157954.15	ENST00000382384.6	1948	12	-14	0	0	0	multi-exon	FALSE	canonical	3	165	junction_11	80.6398994817687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACCATTTTCCCTCCG	5186276	True	NA	-15	True	NA	NA	NA	5190258	5231470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
WTC11_00079107	chr7	+	604	5	FSM	ENSG00000164638.11	ENST00000444741.5	585	5	-19	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	21.3834047803431	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTACGCCATCAACCTG	5282299	True	NA	NA	False	NA	NA	NA	5282942	5291767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5283083_5287805_5287986_5290731_5290864_5291123_5291238_5291729
WTC11_00079111	chr7	+	563	1	FSM	ENSG00000273084.1	ENST00000608012.1	942	1	263	116	263	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCTCCAGAATCTAAGAG	5428863	False	NA	NA	False	NA	NA	NA	5428993	5429556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5429000_5429600
WTC11_00079112	chr7	+	458	1	FSM	ENSG00000272719.1	ENST00000609813.1	515	1	-255	312	-255	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAACAGGGGATCAGTC	5556456	False	NA	NA	False	NA	NA	NA	5556475	5556933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5556500_5556900
WTC11_00079113	chr7	+	2806	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	-22	0	-22	0	multi-exon	FALSE	canonical	1	391	junction_4	374.07778268697	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	NA	False	NA	32	True	AATAAA	-22	NA	5592793	5606655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
WTC11_00079114	chr7	+	3422	4	FSM	ENSG00000075618.18	ENST00000447103.5	713	4	0	-2709	0	0	multi-exon	TRUE	canonical	0	0	junction_1	584.917278101974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	5594535	False	NA	32	True	AATAAA	-22	NA	5594546	5606655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5594897_5603256_5603414_5603495_5603618_5603862
WTC11_00079115	chr7	+	2381	4	FSM	ENSG00000075618.18	ENST00000473330.1	2215	4	-161	-5	-161	4	multi-exon	FALSE	canonical	1	391	junction_3	401.420809957165	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTGTGTGTCTTGGGG	5602697	False	NA	36	True	AATAAA	-26	NA	5602710	5606659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5603414_5603495_5603618_5603862_5604031_5605271
WTC11_00079116	chr7	+	2082	6	FSM	ENSG00000235944.9	ENST00000434898.6	1737	6	-46	-299	0	299	multi-exon	FALSE	canonical	3	8	junction_1	3.72021504754765	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTACAAAAAATTAGCCG	5822765	True	NA	NA	False	NA	NA	NA	5823160	5848042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839948_5840076_5840689_5840857_5846765
WTC11_00079117	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_2	208.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	5898757	False	NA	NA	False	NA	NA	NA	5898780	5902297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900472
WTC11_00079118	chr7	+	2293	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	86	0	-86	multi-exon	FALSE	canonical	3	993	junction_8	254.686081284392	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCGGCTCCTTGAGCAC	5898709	False	NA	NA	False	NA	NA	NA	5898732	5926464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
WTC11_00079119	chr7	+	2136	14	FSM	ENSG00000122674.12	ENST00000628813.2	2218	14	-19	101	0	-101	multi-exon	FALSE	canonical	3	31	junction_2	462.732788049534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGATGACACGTCTGC	5898757	False	NA	NA	False	NA	NA	NA	5898780	5926449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
WTC11_00079120	chr7	+	1124	5	FSM	ENSG00000106305.10	ENST00000400479.6	1107	5	-17	0	-17	0	multi-exon	FALSE	canonical	1	2	junction_1	350.080347920302	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACTGATTTTAAAGGG	5997409	True	NA	NA	False	NA	NA	NA	6009237	6023695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009379_6014901_6015053_6015145_6015353_6017813_6018046_6023302
WTC11_00079121	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	9.7410927974683	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997443	True	NA	16	True	AATAAA	-17	NA	6009271	6023834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
WTC11_00079122	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	287.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	5997487	True	NA	-71	True	TTTAAA	-36	NA	6009315	6023747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009499_6017813_6018046_6023302
WTC11_00079123	chr7	+	5153	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-65	2	-65	-2	multi-exon	FALSE	canonical	3	78	junction_12	14.1090660195718	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGGCGTCTTTTTAC	6101481	True	NA	10	True	TATAAA	-14	NA	6104883	6161562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
WTC11_00079126	chr7	+	919	7	FSM	ENSG00000136238.18	ENST00000356142.4	907	7	-12	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	1722.58952355652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAACAA	6335317	True	NA	-86	True	AAAACA	-8	NA	6374526	6402520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6398661_6398719_6400125_6400189_6401867_6402028_6402315
WTC11_00079127	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	3568	junction_1	63.1803767003648	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	6335317	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
WTC11_00079128	chr7	+	2427	2	FSM	ENSG00000136238.18	ENST00000495499.1	615	2	-330	-1482	-330	35	multi-exon	FALSE	canonical	3	3641	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTCCTGGTGTGTGTT	6401198	False	NA	49	True	NA	NA	NA	6401287	6404002	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6402028_6402315
WTC11_00079129	chr7	+	1363	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	42	junction_1	97.3109889551461	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	6574080	True	NA	25	True	AAGAAA	-31	NA	6577418	6588931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
WTC11_00079130	chr7	+	1567	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	70	junction_1	87.6665761361111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574080	True	NA	12	True	NA	NA	NA	6577418	6588978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
WTC11_00079131	chr7	+	2261	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	-14	-786	-14	390	multi-exon	FALSE	canonical	3	21	junction_1	118.821294387833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCAATTCTTGCTGGTG	6574081	True	NA	NA	False	NA	NA	NA	6577419	6589764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
WTC11_00079134	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.3454558489353	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574115	True	NA	NA	False	NA	NA	NA	6577453	6589374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
WTC11_00079135	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	109.404883672661	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574166	False	NA	NA	False	NA	NA	NA	6577504	6589374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
WTC11_00079137	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	11.2356575241505	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	6588591	True	NA	12	True	AATAAA	-17	NA	6590020	6608726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
WTC11_00079138	chr7	+	2463	7	NIC	ENSG00000146576.13	novel	2178	6	NA	NA	-224	0	intron_retention	FALSE	canonical	3	25	junction_5	37.2308862221797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	NA	False	NA	12	True	AATAAA	-17	NA	6589796	6608726	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607536_6607598_6607959
WTC11_00079141	chr7	+	3917	3	FSM	ENSG00000236609.4	ENST00000457543.4	3864	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	10	junction_1	24	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTCTTGGTGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	6615556	6624290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6616187_6617189_6617308_6621121
WTC11_00079142	chr7	+	3868	3	NNC	ENSG00000236609.4	novel	3864	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTCTTGGTGTTTT	6615231	True	NA	NA	False	AATAAA	-20	NA	6615610	6624290	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_6616187_6617184_6617308_6621121
WTC11_00079143	chr7	+	7234	9	FSM	ENSG00000205903.7	ENST00000382252.6	7243	9	9	0	9	0	multi-exon	FALSE	canonical	3	23	junction_1	11.5623310798472	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTTTTTCCTGAT	6636720	True	NA	22	True	AATAAA	-15	NA	6637326	6658279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6637448_6637845_6638010_6639041_6639142_6641824_6641963_6642381_6642765_6642963_6643074_6643821_6643949_6644479_6644594_6652302
WTC11_00079145	chr7	+	4686	9	NIC	ENSG00000187953.10	novel	3327	14	NA	NA	14	-8	intron_retention	FALSE	canonical	3	11	junction_1	37.0168880377592	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAACCACTAAATTTATGG	6729030	True	NA	NA	False	AATAAA	-12	NA	6729794	6753854	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_6730302_6731896_6731956_6733398_6733528_6735304_6735390_6737075_6737937_6741684_6741853_6746087_6746189_6747035_6747206_6751248
WTC11_00079147	chr7	+	6293	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	420	junction_1	66.5482281256734	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	NA	False	NA	15	True	AATAAA	-15	NA	7182525	7248616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
WTC11_00079148	chr7	+	1186	2	FSM	ENSG00000106392.11	ENST00000476068.1	1186	2	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTCAGTTTTTTCTC	7176086	True	NA	NA	False	AATATA	-41	NA	7182629	7235297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7182821_7234302
WTC11_00079149	chr7	+	2209	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	232.367166355318	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7175998	True	NA	28	True	AATAAA	-18	NA	7182541	7244350	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
WTC11_00079150	chr7	+	429	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTACTAATTAATCTGG	NA	False	NA	NA	False	NA	NA	NA	7233674	7234103	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_7233700_7234100
WTC11_00079152	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	74.2348295435193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566733	True	NA	16	True	AATAAA	-14	NA	7566874	7607223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00079153	chr7	+	4886	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	-9	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	83.9740369929235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	7566733	True	NA	NA	False	NA	NA	NA	7566874	7608932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00079157	chr7	+	5456	12	NNC	ENSG00000164654.16	novel	4877	13	NA	NA	0	212	intron_retention	FALSE	canonical	0	0	junction_3	93.0340735589666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAATTATGATTCCTT	7566331	False	NA	NA	False	AATAAA	-26	NA	7567052	7609144	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7567689_7568025_7568124_7572435_7573772_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00079160	chr7	+	2232	4	FSM	ENSG00000219545.12	ENST00000682710.1	2232	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	29.4089933334837	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	7637955	True	NA	34	True	AATAAA	-30	NA	7640751	7879223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7877280
WTC11_00079161	chr7	+	2378	5	NNC	ENSG00000219545.12	novel	2368	5	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.7393813686847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGGTTTGATTGCAT	7637997	True	NA	29	True	AATAAA	-41	NA	7640793	7879218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7640822_7641503_7641708_7673319_7673454_7801669_7801744_7877280
WTC11_00079163	chr7	+	4755	8	NIC	ENSG00000106415.13	novel	4741	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_3	16.2468207250979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTTCACACATGTTTT	NA	False	NA	11	True	AATAAA	-17	NA	7968775	8089077	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7969808_8003907_8004060_8022482_8022570_8055435_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
WTC11_00079167	chr7	+	203	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCTGACCGCGCTAA	NA	False	NA	NA	False	NA	NA	NA	9355390	9355593	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9355400_9355600
WTC11_00079168	chr7	+	339	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTTTTTTAAAGCATG	NA	False	NA	NA	False	TTTAAA	-34	NA	9355794	9356133	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9355800_9356100
WTC11_00079169	chr7	+	1982	1	FSM	ENSG00000197320.5	ENST00000443027.1	2032	1	-72	122	-72	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGTGTCCAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	9726168	9728150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_9726200_9728200
WTC11_00079170	chr7	+	219	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAAATGATTTCATTC	NA	False	NA	NA	False	AATAAA	-33	NA	10453285	10453504	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_10453300_10453500
WTC11_00079171	chr7	+	9190	17	FSM	ENSG00000106443.17	ENST00000403050.7	4276	17	-540	-4374	-4	-2292	multi-exon	FALSE	canonical	3	16	junction_16	41.1608411448308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGTGTGTAAAATTA	10972991	True	NA	NA	False	NA	NA	NA	10973331	11108029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11102485
WTC11_00079173	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	20.6555203040529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	10968771	True	NA	NA	False	AATAAA	-17	NA	10973871	11169618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
WTC11_00079174	chr7	+	2644	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	-17	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	41.0144315302553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	10968771	True	NA	NA	False	AATAAA	-22	NA	10973871	11169623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
WTC11_00079176	chr7	+	6324	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	-76	6103	-52	4864	multi-exon	FALSE	canonical	3	153	junction_4	16.7502665223998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGCTATGCTTTTGAAA	12208624	True	NA	34	True	AATAAA	-19	NA	12211217	12237264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
WTC11_00079177	chr7	+	658	4	FSM	ENSG00000106460.19	ENST00000444443.5	584	4	-74	0	-48	0	multi-exon	FALSE	canonical	3	18	junction_1	78.8303382094877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTTTTTCCTTTT	12208628	True	NA	NA	False	NA	NA	NA	12211221	12224274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12211548_12214808_12215028_12218457_12218522_12224225
WTC11_00079178	chr7	+	2179	8	NIC	ENSG00000106460.19	novel	12351	8	NA	NA	1	689	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	61.0784039458418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGCACATCACTTGG	12208716	True	NA	22	True	AATAAA	-19	NA	12211309	12233089	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_12211548_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
WTC11_00079179	chr7	+	540	1	FSM	ENSG00000203523.3	ENST00000421146.1	910	1	-50	420	-50	-420	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACACCACACTAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	12491044	12491584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12491000_12491600
WTC11_00079180	chr7	+	278	3	FSM	ENSG00000006747.15	ENST00000476649.1	969	3	0	691	0	-691	multi-exon	FALSE	canonical	3	5	junction_1	0.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTGAAACTGAACTG	NA	False	NA	NA	False	AATGAA	-20	NA	12622837	12625850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12622894_12625009_12625143_12625761
WTC11_00079181	chr7	+	1147	2	FSM	ENSG00000122644.13	ENST00000356797.7	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12688165
WTC11_00079182	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12688168
WTC11_00079183	chr7	+	3448	2	FSM	ENSG00000122644.13	ENST00000396663.2	3212	2	-111	-125	50	101	multi-exon	FALSE	canonical	3	50	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTCATATCTAGTTTC	12685892	False	NA	NA	False	TTTAAA	-19	NA	12687174	12691059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687729_12688165
WTC11_00079185	chr7	+	1863	12	FSM	ENSG00000136261.16	ENST00000433922.6	1862	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	87	junction_1	186.639883950328	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGGGCTTATATTG	16638260	True	NA	12	True	AATAAA	-10	NA	16646132	16706512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
WTC11_00079186	chr7	+	1728	11	FSM	ENSG00000136261.16	ENST00000630952.2	1721	11	-7	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_5	218.661930843025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	16638254	True	NA	23	True	AATAAA	-21	NA	16646126	16706523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
WTC11_00079187	chr7	+	1803	12	FSM	ENSG00000136261.16	ENST00000436868.5	1784	12	-47	28	-4	0	multi-exon	FALSE	canonical	3	20	junction_5	210.051233419747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	16638254	True	NA	-19	True	NA	NA	NA	16646126	16706481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685923_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
WTC11_00079188	chr7	+	1825	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	-21	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	89.5677406508016	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	16638287	True	NA	17	True	AATAAA	-15	NA	16646159	16706517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
WTC11_00079190	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	218.861051811418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	16638322	True	NA	-19	True	NA	NA	NA	16646194	16706481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
WTC11_00079191	chr7	+	1885	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	465	junction_2	21.301643129111	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	16751506	True	NA	28	True	ATTAAA	-30	NA	16753742	16784536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
WTC11_00079192	chr7	+	6243	11	FSM	ENSG00000106546.14	ENST00000242057.9	6243	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.72363520850167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGTTTTAATGTAAAT	17297726	True	NA	NA	False	AATAAA	-15	NA	17298651	17346147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_17299330_17309935_17310124_17322500_17322608_17327758_17327849_17329951_17330076_17330755_17330887_17333911_17334115_17334886_17334997_17335644_17335787_17338985_17340229_17342920
WTC11_00079193	chr7	+	555	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	82	1783	82	-1783	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTTTAGTTATGCTAC	17940493	True	NA	NA	False	NA	NA	NA	17940584	17941139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_17940600_17941100
WTC11_00079194	chr7	+	4296	11	FSM	ENSG00000048052.24	ENST00000622668.4	4279	11	-17	0	-10	0	multi-exon	FALSE	canonical	3	28	junction_6	16.1418710191849	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	18494573	True	NA	1	True	AATAAA	-10	NA	18495728	18668837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00079195	chr7	+	4256	12	FSM	ENSG00000048052.24	ENST00000405010.7	4239	12	-17	0	-10	0	multi-exon	FALSE	canonical	3	18	junction_3	20.6233439104716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18494573	True	NA	7	True	AATAAA	-16	NA	18495728	18668843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00079197	chr7	+	4102	10	FSM	ENSG00000048052.24	ENST00000406072.5	4102	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	16.9974580525123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18496152	False	NA	7	True	AATAAA	-16	NA	18496166	18668843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00079198	chr7	+	325	2	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGGCCCTGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19896639	19898738	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_19896671_19898444
WTC11_00079199	chr7	+	574	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	-42	-49	-42	49	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	20002653	True	NA	NA	False	AATAAA	-26	NA	20002722	20003296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20002700_20003300
WTC11_00079200	chr7	+	775	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	4	19	1	-16	multi-exon	FALSE	canonical	3	42	junction_1	16.4544826719043	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	20216885	True	NA	NA	False	ATTAAA	-12	NA	20217539	20221681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
WTC11_00079201	chr7	+	697	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	11	19	8	-16	multi-exon	FALSE	canonical	3	22	junction_1	25.31578339473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	20216892	True	NA	NA	False	ATTAAA	-12	NA	20217546	20221681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
WTC11_00079202	chr7	+	623	2	FSM	ENSG00000233834.7	ENST00000439446.1	676	2	53	0	53	0	multi-exon	FALSE	canonical	3	84	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	20219478	False	NA	NA	False	ATTAAA	-31	NA	20219491	20221700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20219757_20221342
WTC11_00079203	chr7	+	5035	1	ISM	ENSG00000105855.10	ENST00000222573.5	8974	14	79817	3	46072	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATATGCAAAACGCTT	NA	False	NA	9	True	AATAAA	-13	NA	20410716	20415751	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_20410700_20415800
WTC11_00079204	chr7	+	334	1	FSM	ENSG00000219451.3	ENST00000405810.2	428	1	48	46	48	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCCCGGATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	20827373	20827707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20827400_20827700
WTC11_00079205	chr7	+	6617	6	FSM	ENSG00000105866.15	ENST00000222584.8	6077	6	-564	24	-524	-24	multi-exon	FALSE	canonical	3	66	junction_1	9.45727233402951	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTATTTGAACTATCAA	21426741	True	NA	-17	True	TATAAA	-8	NA	21427518	21514798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_21428259_21428676_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
WTC11_00079206	chr7	+	658	4	NNC	ENSG00000228649.10	novel	574	2	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.46337971105226	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22853949	22861436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_22853978_22856521_22856557_22856972_22857017_22860885
WTC11_00079207	chr7	+	1753	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	-10	0	-10	0	multi-exon	FALSE	canonical	2	7	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	6	True	AATAAA	-20	NA	22854142	22858552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972
WTC11_00079208	chr7	+	1400	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	8	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	6.41774882649672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	22850914	True	NA	NA	False	AATAAA	-25	NA	22854253	22861580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
WTC11_00079209	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.66077672302228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850916	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
WTC11_00079211	chr7	+	3177	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	-12	0	-12	0	multi-exon	FALSE	canonical	3	81	junction_1	230.072859462295	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	23093683	True	NA	7	True	AATAAA	-15	NA	23105745	23175302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
WTC11_00079212	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	207.588986942949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	23093722	True	NA	13	True	AATAAA	-16	NA	23105784	23126045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
WTC11_00079213	chr7	+	1832	9	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	0	345	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	297.267556251939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTTATTTGGATTCC	23093722	True	NA	13	True	AATAAA	-16	NA	23105784	23156513	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
WTC11_00079214	chr7	+	5145	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	474	0	-474	multi-exon	FALSE	canonical	3	345	junction_9	181.39749171364	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTTTTCCTTAGTA	23093722	True	NA	NA	False	AGTAAA	-33	NA	23105784	23177440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
WTC11_00079215	chr7	+	1090	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	337.874888087292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	23093736	True	NA	17	True	AATAAA	-20	NA	23105798	23126049	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
WTC11_00079218	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.444622322051	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	23106269	False	NA	-23	True	AATGAA	-31	NA	23106294	23175388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
WTC11_00079221	chr7	+	1105	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	-537	171	-340	-171	multi-exon	FALSE	canonical	3	165	junction_2	16.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATCAACTACCAACTTA	23181490	False	NA	NA	False	NA	NA	NA	23181500	23187221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182207_23185069_23185299_23187051
WTC11_00079222	chr7	+	1419	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	-90	-44	-48	0	multi-exon	FALSE	canonical	2	15	junction_1	58.2635391990566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCTCACAATTTA	23178906	True	NA	15	True	AATAAA	-23	NA	23181975	23201011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
WTC11_00079224	chr7	+	1581	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	-10	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	15.9756759550957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178968	True	NA	10	True	AATAAA	-18	NA	23182037	23201006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
WTC11_00079226	chr7	+	2529	4	FSM	ENSG00000136243.18	ENST00000477844.1	2529	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	4.32049379893857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCTCACAATTTA	NA	False	NA	15	True	AATAAA	-23	NA	23194402	23201011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23195916_23196679_23196767_23199457_23199543_23200167
WTC11_00079227	chr7	+	1665	1	FSM	ENSG00000226816.3	ENST00000413042.3	2259	1	488	106	488	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAACGGACAAATGA	23206249	False	NA	NA	False	NA	NA	NA	23206274	23207939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23206300_23207900
WTC11_00079228	chr7	+	829	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	-78	2154	-78	0	multi-exon	FALSE	canonical	3	580	junction_3	57.659922534345	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTGAGTCACTTATT	NA	False	NA	31	True	AATAAA	-32	NA	23299260	23309575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
WTC11_00079230	chr7	+	939	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	8	-55	8	55	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACATGAATGT	23490334	True	NA	NA	False	AATAAA	-33	NA	23490480	23491419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23490500_23491400
WTC11_00079231	chr7	+	2478	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	-3	-5	-3	5	multi-exon	FALSE	canonical	3	38	junction_2	6.0184900284226	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACAGTCTTTTTTCTTT	23596823	True	NA	61	True	AATAAA	-24	NA	23597378	23644713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
WTC11_00079232	chr7	+	624	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_2	23.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCCATGTTTTTCTAC	23596860	True	NA	NA	False	AATAAA	-21	NA	23597415	23602219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23601870
WTC11_00079233	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	23596886	True	NA	55	True	AATAAA	-18	NA	23597441	23644707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23611170_23611554_23642930
WTC11_00079234	chr7	+	2693	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	-128	-1718	5	34	multi-exon	FALSE	canonical	3	10	junction_2	17.1318416990118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCATTTAATAAATGATA	23596831	True	NA	90	True	NA	NA	NA	23597386	23644742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
WTC11_00079235	chr7	+	3023	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	-1779	-483	-1725	0	multi-exon	FALSE	canonical	3	111	junction_1	95.7613700820952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	NA	False	NA	16	True	AATAAA	-25	NA	23678404	23702650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
WTC11_00079238	chr7	+	1472	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	-69	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	78.39589700148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677864	True	NA	16	True	AATAAA	-25	NA	23680129	23702650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
WTC11_00079239	chr7	+	4154	8	FSM	ENSG00000188732.11	ENST00000462546.5	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	113.397800792122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677913	True	NA	16	True	AATAAA	-25	NA	23680178	23702650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23692182_23694914_23698191_23698300_23700785_23700869_23702095
WTC11_00079240	chr7	+	1141	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	-5	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	96.8952398211594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677913	True	NA	16	True	AATAAA	-25	NA	23680178	23702650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
WTC11_00079242	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.89897948556636	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	24284036	True	NA	19	True	AATAAA	-18	NA	24284189	24291862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
WTC11_00079243	chr7	+	563	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	2	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTGTTTAAATAA	24285033	True	NA	-19	True	NA	NA	NA	24285108	24291824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24285429_24289498_24289580_24291662
WTC11_00079244	chr7	+	3608	1	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACATTTCCTTCTTTC	24389128	True	NA	NA	False	NA	NA	NA	24396594	24400202	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24396600_24400200
WTC11_00079245	chr7	+	1858	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	24400075	False	NA	10	True	AATAAA	-16	NA	24400085	24401943	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24400100_24401900
WTC11_00079246	chr7	+	975	5	FSM	ENSG00000105926.16	ENST00000432190.5	982	5	7	0	7	0	multi-exon	FALSE	canonical	3	44	junction_1	93.2694349720207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTAATAAAATTTTTGG	24573121	False	NA	NA	False	NA	NA	NA	24573274	24650712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484
WTC11_00079248	chr7	+	5391	12	NIC	ENSG00000105926.16	novel	8346	12	NA	NA	7	1518	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	73.5766312164197	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGTACTTATTTTTA	24573121	False	NA	NA	False	AATAAA	-25	NA	24573274	24691058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
WTC11_00079249	chr7	+	8970	12	NIC	ENSG00000105926.16	novel	1191	8	NA	NA	232	185	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	77.6571187926358	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAGATAATAATGGAGG	24573615	False	NA	NA	False	AAAAAG	-27	NA	24573697	24694378	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
WTC11_00079252	chr7	+	3740	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	56.1209012361309	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	26144312	True	NA	22	True	AATAAA	-31	NA	26152197	26187137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
WTC11_00079253	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1504.55370126825	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26201065	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
WTC11_00079255	chr7	+	1737	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	-20	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	1547.40771614982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26168194	True	NA	32	True	AATAAA	-24	NA	26201744	26213356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
WTC11_00079256	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3707	junction_1	195.776811701488	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	26168194	True	NA	9	True	ATTAAA	-19	NA	26201744	26213607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
WTC11_00079257	chr7	+	1835	7	NNC	ENSG00000122565.19	novel	2061	6	NA	NA	4	62384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1507.01150183622	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATTAGTCTGGTGTG	26168198	True	NA	NA	False	NA	NA	NA	26201748	26275991	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081_26213352_26275957
WTC11_00079259	chr7	+	2716	8	NIC	ENSG00000086300.16	novel	2665	7	NA	NA	-22	-26	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	60.7416744946018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGATCATTTTTACATTA	26291147	True	NA	-32	True	NA	NA	NA	26291839	26374291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
WTC11_00079260	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.8263142336497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	26291169	True	NA	60	True	AATATA	-19	NA	26291861	26374383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
WTC11_00079263	chr7	+	4243	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	35	-1800	-12	914	multi-exon	TRUE	canonical	3	936	junction_13	118.328577882733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTGCTTTCAGACTT	27730116	True	NA	108	True	ATTAAA	-23	NA	27740129	27830681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
WTC11_00079264	chr7	+	3137	16	FSM	ENSG00000106052.14	ENST00000433216.6	3174	16	37	0	-10	0	multi-exon	FALSE	canonical	1	9	junction_3	290.100779423672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATTGTTGTCAAATT	27730118	True	NA	17	True	ATTAAA	-29	NA	27740131	27829765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
WTC11_00079265	chr7	+	4369	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	-32	-914	-12	914	multi-exon	FALSE	canonical	3	154	junction_14	253.833329913548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTGCTTTCAGACTT	27730116	True	NA	108	True	ATTAAA	-23	NA	27740129	27830681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
WTC11_00079266	chr7	+	268	3	FSM	ENSG00000146592.17	ENST00000468391.5	643	3	-4	379	-4	-379	multi-exon	FALSE	canonical	1	1	junction_2	1	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTCCAGCCAATGCAT	28686031	True	NA	NA	False	NA	NA	NA	28686132	28724297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_28686198_28718752_28718880_28724221
WTC11_00079267	chr7	+	250	1	FSM	ENSG00000272568.6	ENST00000608972.1	1327	1	-67	1144	-67	-1144	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGGACTTGGATGTGAA	NA	False	NA	NA	False	AAGAAA	-17	NA	29008858	29009108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29008900_29009100
WTC11_00079268	chr7	+	417	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	0	8	0	-8	multi-exon	FALSE	canonical	2	4	junction_2	9.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGACCTTTTTGGGGT	29146097	True	NA	NA	False	ATTAAA	-10	NA	29146588	29148649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29146746_29146848_29146961_29148501
WTC11_00079269	chr7	+	2188	2	FSM	ENSG00000176532.4	ENST00000450427.1	503	2	-1685	0	-70	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGCAGAAAGAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	29563764	29566383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29565754_29566184
WTC11_00079270	chr7	+	1652	2	FSM	ENSG00000176532.4	ENST00000319694.3	1652	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	29563341	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29564378_29566184
WTC11_00079271	chr7	+	4685	1	Antisense	novelGene_ENSG00000288973.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAGCCAAGAGAGCACT	NA	False	NA	NA	False	AAAAAG	-24	NA	29644307	29648992	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_29644300_29649000
WTC11_00079272	chr7	+	4202	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	27	-4	27	4	multi-exon	FALSE	canonical	1	1	junction_4	7.06664701255129	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTTCCTTGTTAA	29806061	True	NA	27	True	AATAAA	-21	NA	29806534	29917065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
WTC11_00079273	chr7	+	7832	14	FSM	ENSG00000106086.20	ENST00000449726.6	7774	14	-58	0	-7	0	multi-exon	TRUE	canonical	2	119	junction_13	42.5848265890716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTTAAAGGTTTTT	30025637	True	NA	4	True	AATAAA	-16	NA	30028353	30084650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30078589
WTC11_00079274	chr7	+	2294	13	FSM	ENSG00000106086.20	ENST00000258679.11	2293	13	-8	7	-7	-7	multi-exon	FALSE	canonical	1	3	junction_12	70.3891958249907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATACGTATTGTTTC	30025637	True	NA	NA	False	AATAAA	-12	NA	30028353	30090737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30090152
WTC11_00079275	chr7	+	2162	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	-22	0	-22	0	multi-exon	FALSE	canonical	2	26	junction_13	62.275015172964	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	30028316	False	NA	19	True	AATAAA	-16	NA	30028338	30118345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
WTC11_00079276	chr7	+	1920	14	FSM	ENSG00000106086.20	ENST00000396257.6	1907	14	-13	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	65.3042039477891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTCAAGATTTTTATT	30025695	True	NA	NA	False	NA	NA	NA	30028411	30129472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30129265
WTC11_00079277	chr7	+	3024	15	NIC	ENSG00000106086.20	novel	3440	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	83.3156341748605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTATTTCTGTTTCT	30025724	True	NA	NA	False	AATAAA	-17	NA	30028440	30130483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30128757_30128880_30129265
WTC11_00079278	chr7	+	2840	13	FSM	ENSG00000106086.20	ENST00000396259.5	2840	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_12	66.7251306147508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTATTTCTGTTTCT	30025724	True	NA	NA	False	AATAAA	-17	NA	30028440	30130483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30129265
WTC11_00079280	chr7	+	2306	3	FSM	ENSG00000180354.16	ENST00000324453.13	5761	3	-165	3620	-165	1173	multi-exon	FALSE	canonical	3	27	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTTTTCTTGAAAAG	30134775	True	NA	-41	True	NA	NA	NA	30134820	30159142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30135299_30146176_30146300_30157437
WTC11_00079281	chr7	+	3171	5	FSM	ENSG00000180233.11	ENST00000323037.5	3167	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	123	junction_1	23.0813777751676	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCCAGCTCAGATAACA	30284573	False	NA	10	True	ATTAAA	-23	NA	30284592	30367689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30285827_30323641_30323738_30355727_30355834_30362376_30362457_30366034
WTC11_00079282	chr7	+	6921	6	Fusion	ENSG00000180233.11_ENSG00000235859.5	novel	3167	5	NA	NA	0	0	multi-exon	FALSE	canonical	1	5	junction_5	63.6414958969382	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCACATCCTTTGTGTG	30284577	False	NA	NA	False	AAGAAA	-11	NA	30284596	30372741	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_30285827_30323641_30323738_30355727_30355834_30362376_30362457_30366034_30369656_30370953
WTC11_00079286	chr7	+	2608	19	FSM	ENSG00000106105.15	ENST00000676088.1	2602	19	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	550.416262231045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	30568251	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30606325_30606398_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00079290	chr7	+	5966	15	FSM	ENSG00000106105.15	ENST00000470392.2	5962	15	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_11	330.667475860322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568251	True	NA	19	True	ATTAAA	-22	NA	30594831	30634033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30632438_30633734
WTC11_00079291	chr7	+	2456	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.92345802759	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568278	True	NA	19	True	ATTAAA	-22	NA	30594858	30634033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00079292	chr7	+	2457	17	NNC	ENSG00000106105.15	novel	2437	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	313.92345802759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568278	True	NA	19	True	ATTAAA	-22	NA	30594858	30634033	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621502_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00079293	chr7	+	2451	17	NNC	ENSG00000106105.15	novel	2437	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	313.92345802759	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTGTGATCTATTTGC	30568278	True	NA	15	True	ATTAAA	-18	NA	30594858	30634029	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622317_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00079294	chr7	+	2555	18	FSM	ENSG00000106105.15	ENST00000444666.6	2552	18	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	480.460505741996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568313	True	NA	19	True	ATTAAA	-22	NA	30594893	30634033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30627056_30627191_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00079296	chr7	+	1666	11	ISM	ENSG00000106125.14	ENST00000265299.6	2733	18	17	40113	17	-40112	5prime_fragment	FALSE	canonical	2	6	junction_10	7.82879301041993	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTACGACTTTCTGGA	30771026	True	NA	NA	False	AATACA	-19	NA	30771433	30852274	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215
WTC11_00079297	chr7	+	6593	14	FSM	ENSG00000078549.15	ENST00000409363.5	1889	14	-238	-4466	-19	-2	multi-exon	FALSE	canonical	3	22	junction_4	8.0589543715131	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGCTGTAACTTG	31051661	True	NA	8	True	AATAAA	-14	NA	31052288	31111472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_31052679_31063193_31063316_31064830_31064937_31077990_31078099_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31103236_31103367_31104867_31104910_31106495
WTC11_00079298	chr7	+	441	6	FSM	ENSG00000078549.15	ENST00000436116.1	441	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	19.4586741583285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTGAGGTAAGACCTT	NA	False	NA	NA	False	NA	NA	NA	31086970	31104899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_31087004_31087626_31087697_31092643_31092736_31095666_31095751_31103236_31103367_31104867
WTC11_00079300	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_3	8.12403840463596	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	31686336	True	NA	15	True	AATAAA	-15	NA	31687214	31708455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
WTC11_00079301	chr7	+	752	1	FSM	ENSG00000226421.1	ENST00000435239.1	897	1	-76	221	-76	-221	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCCATCCATTTGAC	32471396	False	NA	NA	False	NA	NA	NA	32471436	32472188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32471400_32472200
WTC11_00079302	chr7	+	7002	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	-19	4	-19	-4	multi-exon	FALSE	canonical	3	96	junction_11	16.4673414166748	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTGTCCTAGAAGTAC	32488220	True	NA	23	True	AATAAA	-32	NA	32495469	32588722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
WTC11_00079303	chr7	+	6372	13	FSM	ENSG00000105778.20	ENST00000446718.1	6372	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	37.6307904366742	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGGACTTGACCTGT	32543238	True	NA	12	True	AATAAA	-21	NA	32543254	32588711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32580801_32580891_32583791
WTC11_00079304	chr7	+	978	1	FSM	ENSG00000237004.4	ENST00000441407.1	443	1	-537	2	-537	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGACCCCTCTCCACGC	32727636	True	NA	NA	False	NA	NA	NA	32728031	32729009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32728000_32729000
WTC11_00079305	chr7	+	3043	3	NNC	ENSG00000237004.4	novel	711	2	NA	NA	66	2318	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	4	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTTGAGTTAAAATTC	32728869	False	NA	NA	False	AATAAA	-22	NA	32728903	32756062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_32729010_32751393_32751474_32753205
WTC11_00079306	chr7	+	472	1	FSM	ENSG00000273014.1	ENST00000609151.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTCAAATGTATTA	NA	False	NA	11	True	ATTAAA	-30	NA	32758881	32759353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32758900_32759400
WTC11_00079307	chr7	+	3515	10	FSM	ENSG00000122642.11	ENST00000242209.9	3424	10	-91	0	-55	0	multi-exon	FALSE	canonical	3	62	junction_5	9.68899082515184	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGTTTTCTGATATT	NA	False	NA	3	True	AATAAA	-44	NA	32957348	33006928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32957795_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32996162_32996350_33000114_33000261_33002675_33002840_33005174
WTC11_00079309	chr7	+	2994	21	FSM	ENSG00000122507.21	ENST00000673431.1	2994	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.412276225053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTCTGTCCATGCT	33129175	True	NA	NA	False	NA	NA	NA	33129552	33534176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146268_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953
WTC11_00079311	chr7	+	4020	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	-24	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	133.438575029056	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	33129162	True	NA	6	True	AATAAA	-20	NA	33129539	33606069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
WTC11_00079314	chr7	+	1728	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-78	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATATCTTGGATTTTA	33348469	True	NA	NA	False	AATAAA	-14	NA	33351848	33605626	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
WTC11_00079316	chr7	+	1726	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	62	8	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATGTGATTTGTTCT	33348609	True	NA	4	True	AATAAA	-15	NA	33351988	33605779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
WTC11_00079317	chr7	+	645	5	ISM	ENSG00000122507.21	ENST00000672758.1	1349	7	99643	452	99643	-452	3prime_fragment	FALSE	canonical	1	1	junction_1	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGATACTCTGCTTGGG	NA	False	NA	NA	False	NA	NA	NA	33637825	33652222	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_33637882_33642269_33642357_33642809_33642919_33650639_33650756_33651945
WTC11_00079318	chr7	+	4209	1	FSM	ENSG00000271122.1	ENST00000605778.1	4200	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTGTAAATAATGGTT	35694743	True	NA	NA	False	AATAAA	-18	NA	35695204	35699413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_35695200_35699400
WTC11_00079319	chr7	+	4395	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	4	0	-4	multi-exon	FALSE	canonical	3	320	junction_1	285.620219386202	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCCCAAGCTCCAATGAA	NA	False	NA	NA	False	AATAAA	-11	NA	35800931	35907101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
WTC11_00079321	chr7	+	1575	14	Fusion	ENSG00000226102.3_ENSG00000122545.21	novel	4284	14	NA	NA	0	1124	multi-exon	FALSE	non_canonical	0	0	junction_1	509.975947918744	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATCAGCGTTGGATCC	35799720	True	NA	NA	False	NA	NA	NA	35801038	35973711	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_35801270_35831447_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35966390_35966527_35972446_35972587_35973624
WTC11_00079324	chr7	+	2488	13	NNC	ENSG00000122545.21	novel	4399	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	367.745411256211	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTGAGGTCTTAA	35799720	True	NA	13	True	AATAAA	-15	NA	35801038	35905305	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_35801273_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
WTC11_00079326	chr7	+	4655	8	FSM	ENSG00000122547.11	ENST00000242108.9	4655	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	4.62027475108464	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGGGTTTTGACAAAT	36152091	True	NA	3	True	ATTAAA	-22	NA	36153253	36301538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36284685_36284821_36287638_36287778_36296992_36297188_36299006
WTC11_00079327	chr7	+	4690	25	NIC	ENSG00000011426.11	novel	4731	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	120.206412462989	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAAACACTAAATTCT	36384705	True	NA	-3	True	ATTAAA	-16	NA	36389820	36453655	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36428306_36428361_36439203_36439291_36443754_36443863_36449664_36449838_36452476
WTC11_00079328	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	108.116519635909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384705	True	NA	38	True	AATAAA	-23	NA	36389820	36453791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
WTC11_00079329	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.0889405003264	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384746	True	NA	38	True	AATAAA	-23	NA	36389861	36453791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
WTC11_00079332	chr7	+	2515	3	FSM	ENSG00000086289.12	ENST00000199448.9	2515	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTTATCCTCTCT	37920137	True	NA	NA	False	AATAAA	-24	NA	37920639	37951936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_37921209_37948839_37949049_37950199
WTC11_00079333	chr7	+	1360	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	-19	0	-1	0	multi-exon	FALSE	canonical	3	49	junction_4	113.590025431598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	38174472	True	NA	-26	True	NA	NA	NA	38178243	38230379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
WTC11_00079334	chr7	+	1713	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	-10	0	-10	0	multi-exon	FALSE	canonical	3	294	junction_4	36.4243651283039	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	38174463	True	NA	7	True	ATTAAA	-14	NA	38178234	38230669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
WTC11_00079335	chr7	+	1683	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	-27	-291	0	2	multi-exon	FALSE	canonical	3	37	junction_1	133.492497592862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTGTTTTTTCAAAC	38174552	True	NA	10	True	ATTAAA	-17	NA	38178323	38230672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
WTC11_00079337	chr7	+	2233	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	-3	-1570	-3	0	multi-exon	FALSE	canonical	3	392	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATGTTGTAGAACACAG	39562626	True	NA	NA	False	NA	NA	NA	39566381	39572572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39566548_39570505
WTC11_00079338	chr7	+	895	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	-24	0	-5	0	multi-exon	FALSE	canonical	3	352	junction_2	20	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	39562624	True	NA	NA	False	ATTAAA	-17	NA	39566379	39572881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39566548_39570505_39570628_39572276
WTC11_00079340	chr7	+	2966	6	NNC	ENSG00000006451.8	novel	2787	5	NA	NA	-146	104438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	407.557799581851	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGGAGTGGTGGCAGG	39623384	False	NA	NA	False	NA	NA	NA	39623418	39812558	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122_39708117_39812528
WTC11_00079342	chr7	+	2803	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	-16	0	-9	0	multi-exon	FALSE	canonical	3	971	junction_3	31.2209865314983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	39614885	True	NA	16	True	AATAAA	-16	NA	39623555	39708120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
WTC11_00079344	chr7	+	666	3	FSM	ENSG00000006451.8	ENST00000436179.1	882	3	216	0	216	0	multi-exon	FALSE	canonical	3	28	junction_1	511.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTACAGCTGACTTCAG	39615431	False	NA	NA	False	NA	NA	NA	39624101	39690570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39624428_39686630_39686782_39690381
WTC11_00079347	chr7	+	1199	1	FSM	ENSG00000233225.3	ENST00000395959.3	1148	1	181	-232	181	232	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATATGTAAT	NA	False	NA	NA	False	CATAAA	-26	NA	39833751	39834950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39833800_39835000
WTC11_00079352	chr7	+	1150	2	FSM	ENSG00000065883.17	ENST00000642626.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTAGTGAGACCAAATA	39987588	False	NA	NA	False	NA	NA	NA	39987598	39997983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39988259_39997493
WTC11_00079356	chr7	+	1641	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	-24	0	-24	0	multi-exon	FALSE	canonical	2	34	junction_8	11.4555999070659	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134360	True	NA	14	True	AATAAA	-25	NA	40134980	40860763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
WTC11_00079357	chr7	+	2963	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	1	-230	1	0	multi-exon	FALSE	canonical	3	68	junction_2	569.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	42919634	True	NA	21	True	AATAAA	-24	NA	42932376	42937857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_42932517_42934954_42937242_42937321
WTC11_00079359	chr7	+	883	3	FSM	ENSG00000106591.4	ENST00000413995.1	730	3	0	-153	0	153	multi-exon	FALSE	canonical	3	25	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTCTTATTTTTCT	42934944	True	NA	NA	False	NA	NA	NA	42935020	42938010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_42935137_42937163_42937242_42937321
WTC11_00079362	chr7	+	3939	7	FSM	ENSG00000164543.7	ENST00000319357.6	3918	7	-21	0	13	0	multi-exon	FALSE	canonical	3	121	junction_5	16.7007983841093	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAGAATGTGAGACAGA	43579636	True	NA	NA	False	ATTAAA	-16	NA	43583086	43627379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43583450_43595900_43596114_43608255_43608401_43619596_43619724_43623571_43623621_43623708_43623889_43624517
WTC11_00079363	chr7	+	1093	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	365	junction_1	47.0075981700223	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755964	True	NA	NA	False	ATTAAA	-20	NA	43758660	43807342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
WTC11_00079364	chr7	+	1236	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	-25	-50	-18	50	multi-exon	FALSE	canonical	3	11	junction_1	201.749225525155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGACAAGGCGAGAATGA	43755965	True	NA	NA	False	GGGGCT	-7	NA	43758661	43807392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
WTC11_00079369	chr7	+	2132	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	-15	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	105.629955505055	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	44041367	True	NA	20	True	NA	NA	NA	44044701	44061716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
WTC11_00079376	chr7	+	2077	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	-9	0	0	0	multi-exon	FALSE	canonical	1	22	junction_8	132.494942251477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	44041367	True	NA	-59	True	NA	NA	NA	44044701	44061637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
WTC11_00079378	chr7	+	4097	21	FSM	ENSG00000106624.11	ENST00000223357.8	4097	21	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_2	33.3695594816593	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	44101757	True	NA	6	True	AATAAA	-15	NA	44104344	44114560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
WTC11_00079379	chr7	+	551	4	FSM	ENSG00000106624.11	ENST00000449162.1	566	4	15	0	15	0	multi-exon	FALSE	canonical	1	1	junction_1	63.8035178410163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGGTCCTGCCAGC	44106162	False	NA	NA	False	NA	NA	NA	44106175	44107700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44106241_44106545_44106888_44107438_44107511_44107628
WTC11_00079380	chr7	+	2571	8	FSM	ENSG00000106624.11	ENST00000450684.2	2571	8	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	22.9640357684687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTCACATTCTGAGGT	44110714	False	NA	8	True	AATAAA	-17	NA	44110730	44114562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
WTC11_00079381	chr7	+	783	3	FSM	ENSG00000106624.11	ENST00000431035.1	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	12.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATCTGAACGGCGGCG	44111490	False	NA	NA	False	NA	NA	NA	44111506	44112616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44112051_44112141_44112322_44112557
WTC11_00079382	chr7	+	1716	7	FSM	ENSG00000106636.9	ENST00000447123.6	1710	7	-6	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	148.167041619323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCTGTAGATGCCAA	44189533	True	NA	14	True	CATAAA	-7	NA	44200965	44212538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553
WTC11_00079385	chr7	+	5475	6	FSM	ENSG00000106636.9	ENST00000679310.1	5463	6	-12	0	0	0	multi-exon	FALSE	canonical	3	352	junction_5	34.4998550721594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCCCTGCTCCTGTTGT	44189533	True	NA	-97	True	NA	NA	NA	44200965	44214166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44211125_44212246
WTC11_00079387	chr7	+	2779	7	FSM	ENSG00000106636.9	ENST00000223369.3	2767	7	-12	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	31.5193943822248	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCCTGTGCTTTCTT	44189533	True	NA	31	True	GATAAA	-18	NA	44200965	44214294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
WTC11_00079388	chr7	+	2656	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	-1571	0	0	multi-exon	FALSE	canonical	3	32	junction_6	178.822338010184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCCCTGCTCCTGTTGT	44189579	True	NA	-97	True	NA	NA	NA	44201011	44214166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
WTC11_00079390	chr7	+	558	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	-79	-71	-79	71	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTAAGGCCCAGGGAG	NA	False	NA	NA	False	AATAAA	-39	NA	44467817	44468375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44467800_44468400
WTC11_00079394	chr7	+	4232	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	-39	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	36.4868367524282	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	44599201	True	NA	10	True	CATAAA	-17	NA	44606587	44709066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
WTC11_00079396	chr7	+	5249	19	FSM	ENSG00000122515.16	ENST00000309315.9	5228	19	-21	0	-21	0	multi-exon	FALSE	canonical	3	41	junction_7	28.5520966344369	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGGAATTCATACCC	44746773	True	NA	6	True	TATAAA	-14	NA	44748825	44769881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
WTC11_00079397	chr7	+	3964	18	NIC	ENSG00000122515.16	novel	5228	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_7	25.3819269271045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCCGAGTCCCT	44746787	True	NA	14	True	ATTAAA	-14	NA	44748839	44768688	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
WTC11_00079398	chr7	+	4112	20	NNC	ENSG00000122515.16	novel	5228	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_7	33.2281628039243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGCCTGGCCGAGTCCC	44746806	True	NA	13	True	ATTAAA	-13	NA	44748858	44768687	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44765966_44766057_44766163_44766334_44766420_44766664_44767515
WTC11_00079400	chr7	+	3800	18	FSM	ENSG00000122515.16	ENST00000433667.5	3800	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	35.8420216928557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGAGTCCCTCCTTTG	44754135	False	NA	20	True	ATTAAA	-20	NA	44756187	44768694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44756300_44756424_44756540_44757042_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
WTC11_00079403	chr7	+	3240	11	FSM	ENSG00000122515.16	ENST00000463056.5	3240	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	20.8959326185744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGTCCCTCCTTTGTGC	44759939	False	NA	23	True	ATTAAA	-23	NA	44759950	44768697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
WTC11_00079407	chr7	+	2471	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	-116	-1448	-115	0	multi-exon	FALSE	canonical	3	120	junction_2	8361.43465201995	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAAGGTGGAAATAAAC	44796552	False	NA	-9	True	NA	NA	NA	44796564	44803078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079409	chr7	+	2481	2	FSM	ENSG00000196262.15	ENST00000678643.1	2460	2	-21	0	0	0	multi-exon	FALSE	canonical	3	19040	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAACAATTGTC	44515097	True	NA	-15	True	NA	NA	NA	44796679	44801613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246
WTC11_00079411	chr7	+	829	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	-1	-10	0	-6	multi-exon	FALSE	canonical	3	168	junction_2	8349.59779630133	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGAGTGTTGATGTAG	44515097	True	NA	13	True	AATAAA	-27	NA	44796679	44801641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079412	chr7	+	469	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	-13	-10	0	-6	multi-exon	FALSE	canonical	3	85	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGAGTGTTGATGTAG	44515097	True	NA	13	True	AATAAA	-27	NA	44796679	44801641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44801286
WTC11_00079413	chr7	+	2338	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	-1	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8452.14267745168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	44515097	True	NA	28	True	AATAAA	-19	NA	44796679	44803115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079414	chr7	+	2258	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	-1	-20	0	20	multi-exon	FALSE	canonical	3	17102	junction_2	776.443816383388	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATTAACAGAATAGCCT	44515097	True	NA	50	True	AATAAA	-41	NA	44796679	44803137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079415	chr7	+	4776	2	FSM	ENSG00000196262.15	ENST00000677521.1	4776	2	0	0	0	0	multi-exon	FALSE	canonical	3	17438	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAAGGTGGAAATAAAC	44515308	False	NA	-9	True	NA	NA	NA	44796890	44803078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44799875_44801286
WTC11_00079416	chr7	+	2782	5	FSM	ENSG00000196262.15	ENST00000678789.1	2782	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7470.41409494815	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCATTATCCCTAGT	44515369	False	NA	18	True	AATAAA	-9	NA	44796951	44803105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079417	chr7	+	4378	4	FSM	ENSG00000196262.15	ENST00000678165.1	4378	4	0	0	0	0	multi-exon	FALSE	canonical	3	17102	junction_1	137.20058308914	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTTCATTATCCCTA	44515396	False	NA	16	True	AATAAA	-7	NA	44796978	44803103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079418	chr7	+	2765	6	FSM	ENSG00000196262.15	ENST00000677022.1	2765	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	8424.76407740893	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	44515553	False	NA	28	True	AATAAA	-19	NA	44797135	44803115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44797622_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
WTC11_00079420	chr7	+	908	6	FSM	ENSG00000196262.15	ENST00000480603.1	842	6	-66	0	-66	0	multi-exon	FALSE	canonical	0	0	junction_5	8396.62126334158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	44517165	False	NA	-4	True	AATAAA	-10	NA	44798747	44801624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
WTC11_00079422	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	105.388288524032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-73	True	NA	NA	NA	44999474	45076352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
WTC11_00079423	chr7	+	1885	10	FSM	ENSG00000136280.17	ENST00000258781.11	1864	10	-21	0	-8	0	multi-exon	FALSE	canonical	3	327	junction_1	42.9834880729052	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	44998322	True	NA	28	True	AAAAAG	-28	NA	45000179	45076453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
WTC11_00079430	chr7	+	1309	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	13	1	13	-1	multi-exon	FALSE	canonical	2	4	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTTTTGTTTCATG	45157668	True	NA	3	True	AGTAAA	-18	NA	45157803	45184249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45157887_45177308_45177442_45183156
WTC11_00079432	chr7	+	12657	20	FSM	ENSG00000164742.16	ENST00000297323.12	12657	20	0	0	0	0	multi-exon	TRUE	canonical	2	21	junction_16	8.78584860637104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCATTTCAGTTG	45573872	True	NA	NA	False	AATAAA	-23	NA	45574367	45723116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45575183_45592758_45592909_45610378_45610498_45622631_45622744_45648669_45648798_45657726_45657886_45660041_45660184_45662058_45662215_45677868_45678064_45678165_45678264_45679708_45679794_45684978_45685069_45685961_45686216_45686546_45686674_45703375_45703493_45703599_45703747_45704517_45704617_45708349_45708465_45710527_45710653_45713692
WTC11_00079446	chr7	+	916	1	FSM	ENSG00000218305.5	ENST00000650262.2	2908	1	147	1845	147	-1845	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAAGGATCTGCAGACCT	NA	False	NA	NA	False	NA	NA	NA	48924693	48925609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_48924700_48925600
WTC11_00079447	chr7	+	559	5	FSM	ENSG00000185811.20	ENST00000646110.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.27760839478607	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGCCAATATCACCACC	50304613	False	NA	NA	False	AAAACA	-14	NA	50304677	50369601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_50304923_50319047_50319102_50327637_50327758_50368005_50368066_50369521
WTC11_00079448	chr7	+	4399	7	FSM	ENSG00000185811.20	ENST00000343574.9	5925	7	0	1526	0	1006	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTTCTGTAATTTGTAC	50304717	False	NA	NA	False	NA	NA	NA	50304781	50403572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_50304923_50319047_50319102_50327637_50327758_50382539_50382708_50387344_50387471_50391728_50391864_50399917
WTC11_00079451	chr7	+	865	3	FSM	ENSG00000170419.11	ENST00000495904.1	865	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAAATTACATATTTT	54542308	False	NA	NA	False	NA	NA	NA	54542325	54547160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_54542810_54544621_54544789_54546946
WTC11_00079452	chr7	+	9905	28	FSM	ENSG00000146648.20	ENST00000275493.7	9905	28	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_12	2.87078850001127	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGTTGGTACTAGTTA	55018495	True	NA	7	True	NA	NA	NA	55019016	55211628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55019366_55142285_55142438_55143304_55143489_55146605_55146741_55151293_55151363_55152545_55152665_55154010_55154153_55155829_55155947_55156532_55156660_55156758_55156833_55157662_55157754_55160138_55160339_55161498_55161632_55163732_55163824_55165279_55165438_55171174_55171214_55172982_55173125_55173920_55174044_55174721_55174821_55181292_55181479_55191718_55191875_55192765_55192842_55198716_55198864_55200315_55200414_55201187_55201356_55201734_55201783_55202516_55202626_55205255
WTC11_00079453	chr7	+	4460	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	78	junction_5	11.7340317027013	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	55365277	True	NA	9	True	AGTAAA	-25	NA	55365335	55433737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
WTC11_00079459	chr7	+	1985	10	NNC	ENSG00000146729.10	novel	1993	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_5	231.66738609001	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACGTTTGGATTTTCT	55960819	True	NA	17	True	AATAAA	-18	NA	55964570	56000178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_55964702_55978125_55978266_55978349_55978396_55981472_55981568_55982209_55982281_55983748_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
WTC11_00079461	chr7	+	1898	8	FSM	ENSG00000146729.10	ENST00000446778.5	1882	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	19	junction_2	344.07509858952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTTGGATTTTCTTTT	55960813	True	NA	20	True	AATAAA	-21	NA	55964564	56000181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55964702_55978125_55978266_55981472_55981568_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
WTC11_00079465	chr7	+	4255	7	FSM	ENSG00000146729.10	ENST00000497279.5	4255	7	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	41.5611998543513	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACGTTTGGATTTTCT	NA	False	NA	17	True	AATAAA	-18	NA	55978906	56000178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
WTC11_00079468	chr7	+	2523	13	FSM	ENSG00000146731.11	ENST00000335503.3	2529	13	6	0	6	0	multi-exon	FALSE	canonical	3	75	junction_2	819.191861260569	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017647	True	NA	28	True	AATAAA	-18	NA	56051690	56063989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56051986_56052421_56052486_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
WTC11_00079469	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2441	junction_3	270.128875663924	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017721	True	NA	28	True	AATAAA	-18	NA	56051764	56063989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
WTC11_00079472	chr7	+	2051	9	FSM	ENSG00000129103.19	ENST00000651354.1	2051	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_5	35.5940655165998	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056216	True	NA	28	True	AATAAA	-23	NA	56064223	56080669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
WTC11_00079473	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	148.268096944112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056216	True	NA	28	True	AATAAA	-23	NA	56064223	56080669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
WTC11_00079478	chr7	+	1999	9	NIC	ENSG00000129103.19	novel	1990	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	152.92890505068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056278	True	NA	29	True	AATAAA	-24	NA	56064285	56080670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_56064379_56068481_56068648_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
WTC11_00079482	chr7	+	508	1	FSM	ENSG00000232727.2	ENST00000453697.1	763	1	176	79	176	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGACTTCAGGCATGC	NA	False	NA	NA	False	AAGAAA	-12	NA	64434005	64434513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64434000_64434500
WTC11_00079483	chr7	+	634	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	2	0	2	0	multi-exon	FALSE	canonical	3	14	junction_2	32	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCTATGTGACTCTCC	64572349	True	NA	18	True	AATAAA	-29	NA	64574674	64614834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64574849_64599658_64599783_64614498
WTC11_00079484	chr7	+	535	3	FSM	ENSG00000286456.2	ENST00000690256.1	524	3	-14	3	8	-3	multi-exon	FALSE	canonical	3	18	junction_2	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGGGCCCAGCACC	64572355	True	NA	12	True	AATAAA	-13	NA	64574680	64604050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64574849_64599658_64599783_64603807
WTC11_00079485	chr7	+	604	4	NNC	ENSG00000286456.2	novel	524	3	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	23.6267268622258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCTTTGGGCCCAGCA	64572355	True	NA	10	True	AATAAA	-11	NA	64574680	64604048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_64574849_64599658_64599783_64603558_64603630_64603807
WTC11_00079490	chr7	+	5240	5	FSM	ENSG00000196247.13	ENST00000344930.7	5174	5	-69	3	-1	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2834820402676	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGATTATGCGTG	64662249	True	NA	9	True	AATAAA	-16	NA	64666128	64711023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64666286_64679176_64679337_64691247_64691375_64691864_64691961_64706323
WTC11_00079496	chr7	+	2233	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	-3	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	20.0665559243899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	64790097	True	NA	NA	False	ACTAAA	-29	NA	64794424	64833327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
WTC11_00079497	chr7	+	2607	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	-32	4	8	0	multi-exon	FALSE	canonical	3	30	junction_2	20.9920619917784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790068	True	NA	15	True	AATAAA	-29	NA	64794395	64833676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
WTC11_00079498	chr7	+	3174	2	ISM	ENSG00000197008.10	ENST00000359735.7	2679	4	35741	5	35639	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	NA	False	NA	15	True	AATAAA	-29	NA	64830128	64833676	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_64831077_64831450
WTC11_00079500	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	20.9821352583573	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	64900531	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
WTC11_00079501	chr7	+	1179	4	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	9	-213	combination_of_known_junctions	TRUE	canonical	3	16	junction_3	31.689465477067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAGACTCTTTTGAC	64900540	True	NA	NA	False	CATAAA	-18	NA	64903296	64924218	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
WTC11_00079502	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	7	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	64947812	False	NA	-78	True	NA	NA	NA	64947837	64950641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64947858_64949115_64949410_64950203
WTC11_00079506	chr7	+	1243	1	FSM	ENSG00000232906.1	ENST00000447960.1	1243	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGCAAAAAGTTTTAGT	NA	False	NA	NA	False	TATAAA	-42	NA	65355933	65357176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65355900_65357200
WTC11_00079507	chr7	+	3298	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	-188	55	-132	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6144555520604	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	NA	False	NA	18	True	AATAAA	-19	NA	65373666	65401081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
WTC11_00079508	chr7	+	3118	3	FSM	ENSG00000146757.14	ENST00000357512.3	3124	3	0	6	0	4	multi-exon	FALSE	canonical	1	2	junction_2	47.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAGACTAGTGTATTC	NA	False	NA	1	True	ATTAAA	-14	NA	65373798	65401129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65387901_65388029_65398340
WTC11_00079511	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	3	9	junction_2	29.6033781856058	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
WTC11_00079512	chr7	+	2423	13	FSM	ENSG00000228409.7	ENST00000686689.1	1942	13	68	-549	0	0	multi-exon	FALSE	canonical	3	12	junction_3	28.5028020065084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65749948	True	NA	NA	False	AATAAA	-18	NA	65751141	65764222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65751279_65752163_65752311_65754526_65754662_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
WTC11_00079513	chr7	+	2772	2	ISM	ENSG00000228409.7	ENST00000685316.1	1929	9	10076	-2	10049	0	3prime_fragment	FALSE	canonical	3	94	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	NA	False	NA	NA	False	AATAAA	-18	NA	65761190	65764222	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_65763021_65763280
WTC11_00079515	chr7	+	6128	3	FSM	ENSG00000196715.7	ENST00000360768.5	6087	3	-39	-2	-39	-2	multi-exon	FALSE	canonical	3	492	junction_2	22	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTTCTTTCATGGAG	65873009	False	NA	18	True	AATAAA	-18	NA	65873034	65959560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65873566_65948670_65948781_65954073
WTC11_00079518	chr7	+	1987	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	-13	0	0	0	multi-exon	FALSE	canonical	1	24	junction_6	54.90738956253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	66073661	True	NA	NA	False	AATAAA	-11	NA	66075833	66093334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00079519	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_13	39.3511823908197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	66073716	True	NA	-14	True	NA	NA	NA	66075888	66092932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00079520	chr7	+	1485	15	FSM	ENSG00000126522.17	ENST00000395331.4	1478	15	-7	0	0	0	multi-exon	FALSE	canonical	1	11	junction_11	57.1586138990191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCTGCCCCCTAATA	66073764	True	NA	-29	True	NA	NA	NA	66075936	66092917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00079521	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_1	55.8715728529386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	66073764	True	NA	9	True	AATAAA	-17	NA	66075936	66092955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00079524	chr7	+	885	7	FSM	ENSG00000126522.17	ENST00000493708.5	885	7	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_4	53.9467329872718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGCCCCCTAATAAAGT	66087681	False	NA	-25	True	NA	NA	NA	66087692	66092921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66087792_66088806_66088922_66089090_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00079525	chr7	+	1405	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	-12	0	-3	0	multi-exon	FALSE	canonical	3	6	junction_2	26.7616796931732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	66111568	True	NA	NA	False	AATACA	-4	NA	66114837	66153289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
WTC11_00079529	chr7	+	556	2	FSM	ENSG00000237310.3	ENST00000445681.1	540	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	66493198	True	NA	14	True	ATTAAA	-25	NA	66493689	66495474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66494026_66495254
WTC11_00079530	chr7	+	895	2	FSM	ENSG00000237310.3	ENST00000654121.1	926	2	31	0	-16	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	66493198	True	NA	14	True	ATTAAA	-25	NA	66493689	66495474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66494365_66495254
WTC11_00079536	chr7	+	470	2	NIC	ENSG00000154710.18	novel	2654	10	NA	NA	-45	-86346	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTTGCTGGTTTT	66681367	True	NA	4	True	AATAAA	-15	NA	66682118	66685689	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_66682259_66685359
WTC11_00079538	chr7	+	2281	10	FSM	ENSG00000154710.18	ENST00000450873.6	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.6060292688958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAGCACCATTTTATT	66737428	True	NA	3	True	AATGAA	-16	NA	66740732	66809817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66740793_66768830_66769026_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
WTC11_00079539	chr7	+	4579	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	-846	0	-846	0	multi-exon	FALSE	canonical	3	126	junction_3	20.6514981296757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	NA	False	NA	20	True	AATAAA	-29	NA	66739886	66811464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
WTC11_00079553	chr7	+	361	1	FSM	ENSG00000273448.1	ENST00000609770.1	1337	1	21	955	21	-955	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67333067	67333428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_67333100_67333400
WTC11_00079555	chr7	+	7594	14	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	-1687	3	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	29.3586272513352	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	70692370	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00079572	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	54	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	72827839	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72829784_72831601_72831799_72833763
WTC11_00079573	chr7	+	856	4	FSM	ENSG00000225648.6	ENST00000437201.5	839	4	-17	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	60.6648351371882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTAAACAGTCAGAT	72827839	True	NA	NA	False	AATAAA	-18	NA	72829489	72834006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763
WTC11_00079577	chr7	+	5992	15	FSM	ENSG00000196313.13	ENST00000627934.3	6013	15	21	0	5	0	multi-exon	FALSE	canonical	3	46	junction_1	61.3938440043678	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	72875859	True	NA	NA	False	AATAAA	-19	NA	72879369	72948299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72879886_72890626_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
WTC11_00079578	chr7	+	3456	14	NIC	ENSG00000196313.13	novel	7011	16	NA	NA	11262	171	combination_of_known_junctions	FALSE	canonical	2	10	junction_13	69.7193868261066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGAGCCTCTGCTATGT	NA	False	NA	NA	False	NA	NA	NA	72890626	72948470	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72948327
WTC11_00079579	chr7	+	5863	13	FSM	ENSG00000196313.13	ENST00000434423.5	5842	13	-21	0	-21	0	multi-exon	FALSE	canonical	3	53	junction_1	53.6984248682709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	72922355	True	NA	NA	False	AATAAA	-19	NA	72925073	72948299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72925766_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
WTC11_00079581	chr7	+	3842	24	NNC	ENSG00000233369.7	novel	3609	24	NA	NA	-224	14	at_least_one_novel_splicesite	FALSE	canonical	2	87	junction_5	574.142901927428	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGCTCTCTCGGCTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	73154713	73207297	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182081_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
WTC11_00079582	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_21	490.628241985364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	73152585	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
WTC11_00079583	chr7	+	581	5	ISM	ENSG00000205578.6	ENST00000380760.4	2475	8	-13	5260	-13	-5260	5prime_fragment	FALSE	canonical	2	3	junction_1	74.2057949219601	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGAGTGGGGCCGT	NA	False	NA	NA	False	NA	NA	NA	73293483	73295901	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73293589_73294241_73294316_73294754_73294877_73295321_73295425_73295724
WTC11_00079587	chr7	+	539	5	FSM	ENSG00000071462.12	ENST00000421304.5	538	5	-1	0	-1	0	multi-exon	FALSE	canonical	2	9	junction_2	444.608816826657	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTCTTTAATTCCTG	73667786	True	NA	NA	False	NA	NA	NA	73683567	73687095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73683924_73686635_73686732_73686817_73686901_73686998
WTC11_00079593	chr7	+	1827	11	FSM	ENSG00000071462.12	ENST00000463307.5	1815	11	-12	0	0	0	multi-exon	FALSE	canonical	3	904	junction_9	60.2979269958761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGAGCATCTTATTT	73667815	True	NA	-52	True	AATGAA	-38	NA	73683596	73698156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
WTC11_00079594	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_10	59.1651282149732	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	73667815	True	NA	4	True	AATAAA	-16	NA	73683596	73698212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
WTC11_00079596	chr7	+	1279	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	-19	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	283.48393339988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	73667825	True	NA	NA	False	NA	NA	NA	73683606	73698104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
WTC11_00079597	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	355.89725226063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	73667844	True	NA	0	True	AATAAA	-12	NA	73683625	73698208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
WTC11_00079600	chr7	+	3355	16	FSM	ENSG00000106683.15	ENST00000336180.7	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	8.48266205595599	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	74077931	True	NA	18	True	AATAAA	-24	NA	74083803	74122525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
WTC11_00079603	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1570.72871225428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74107079	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
WTC11_00079604	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	3199	junction_1	339.923167789429	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
WTC11_00079605	chr7	+	2740	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	-180	3	-55	0	multi-exon	TRUE	canonical	3	387	junction_4	1552.64065385394	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	74174175	74197093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
WTC11_00079606	chr7	+	4102	2	FSM	ENSG00000106682.16	ENST00000679161.1	4102	2	0	0	0	0	multi-exon	FALSE	canonical	3	3546	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74192691	False	NA	NA	False	AATAAA	-16	NA	74192701	74197093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74194879_74195168
WTC11_00079607	chr7	+	988	1	Genic_Genomic	ENSG00000086730.17	novel	NA	NA	NA	NA	8977	588	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCGGATGGGATCTTAG	NA	False	NA	NA	False	AATAAA	-22	NA	74229434	74230422	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_74229400_74230400
WTC11_00079608	chr7	+	5659	17	FSM	ENSG00000106665.16	ENST00000223398.11	5623	17	0	-36	0	36	multi-exon	FALSE	canonical	3	30	junction_8	48.9436857520968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGGGCTTCTCGATCTC	74286236	True	NA	44	True	NA	NA	NA	74289406	74405971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74372931_74373037_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
WTC11_00079609	chr7	+	5445	16	FSM	ENSG00000106665.16	ENST00000361545.9	5445	16	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	10.5556725139719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCGGCAGTTGGCT	74286304	True	NA	3	True	AATAAA	-15	NA	74289474	74405930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
WTC11_00079610	chr7	+	3384	27	FSM	ENSG00000006704.11	ENST00000265755.7	3430	27	39	7	39	0	multi-exon	FALSE	canonical	3	36	junction_18	21.1436338985963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	74453808	False	NA	NA	False	TTTAAA	-6	NA	74453828	74602583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555392_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
WTC11_00079611	chr7	+	3339	27	FSM	ENSG00000006704.11	ENST00000424337.7	3284	27	-77	22	39	0	multi-exon	FALSE	canonical	3	48	junction_1	19.2623202716734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	74453808	False	NA	NA	False	TTTAAA	-6	NA	74453828	74602583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
WTC11_00079613	chr7	+	4625	35	FSM	ENSG00000263001.8	ENST00000650807.1	4730	35	105	0	81	0	multi-exon	TRUE	canonical	2	9	junction_1	569.859599202091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74650316	False	NA	NA	False	AATAAA	-27	NA	74650335	74760692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74650797_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079614	chr7	+	4460	33	FSM	ENSG00000263001.8	ENST00000690345.1	3842	33	118	-736	118	-3	multi-exon	FALSE	canonical	2	9	junction_1	429.246682973497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTCATTGCTCTCTCG	74650353	False	NA	NA	False	AATAAA	-22	NA	74650372	74760687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74650797_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079616	chr7	+	4515	35	FSM	ENSG00000263001.8	ENST00000573035.6	4515	35	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	508.140218673852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646479	True	NA	NA	False	AATAAA	-27	NA	74657717	74760692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079618	chr7	+	4352	33	FSM	ENSG00000263001.8	ENST00000620879.4	4352	33	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_10	322.900599062622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079619	chr7	+	4415	34	FSM	ENSG00000263001.8	ENST00000614986.4	4415	34	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_10	366.506148185107	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079620	chr7	+	4412	34	FSM	ENSG00000263001.8	ENST00000621734.4	4412	34	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	487.6673002939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00079621	chr7	+	979	10	FSM	ENSG00000263001.8	ENST00000443166.5	979	10	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_9	84.0627337758923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCTAGCCAACAGGT	74658008	False	NA	NA	False	AATAAA	-18	NA	74658030	74717066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893
WTC11_00079625	chr7	+	2373	7	ISM	ENSG00000263001.8	ENST00000614986.4	4415	34	94332	2	0	0	intron_retention	FALSE	canonical	3	1169	junction_2	212.978415703459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTGCTCTCTCGGCT	NA	False	NA	NA	False	AATAAA	-25	NA	74752089	74760690	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779
WTC11_00079626	chr7	+	3823	4	FSM	ENSG00000263001.8	ENST00000621040.4	3437	4	-386	0	-135	0	multi-exon	FALSE	canonical	3	1541	junction_1	108.778061513647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTGCTCTCTCGGCT	NA	False	NA	NA	False	AATAAA	-25	NA	74753709	74760690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74755538_74756819_74756862_74757958_74758001_74758779
WTC11_00079630	chr7	+	573	3	FSM	ENSG00000174428.19	ENST00000614064.4	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	25.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAGACAAATGGTCATT	75090628	True	NA	9	True	AATAAA	-20	NA	75092599	75112699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75092766_75108959_75109064_75112396
WTC11_00079632	chr7	+	1238	8	FSM	ENSG00000205583.14	ENST00000687422.1	1711	8	8	465	8	94	multi-exon	FALSE	canonical	3	24	junction_7	15.581255090784	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTAGCCAGGATGGTCT	75359196	True	NA	NA	False	NA	NA	NA	75359208	75367181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323_75366439_75366749
WTC11_00079636	chr7	+	1262	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	12	9	0	0	multi-exon	FALSE	canonical	3	85	junction_4	129.378514445019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	75409574	True	NA	15	True	AATAAA	-16	NA	75410361	75416785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
WTC11_00079637	chr7	+	1854	8	FSM	ENSG00000223705.10	ENST00000457988.5	1836	8	-18	0	-6	0	multi-exon	FALSE	canonical	3	25	junction_2	134.155255778748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409556	True	NA	17	True	AATAAA	-18	NA	75410343	75416787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
WTC11_00079642	chr7	+	4792	6	FSM	ENSG00000223705.10	ENST00000393633.6	4792	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	77.6880943259648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409562	True	NA	16	True	AATAAA	-17	NA	75410349	75416786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75411575_75411654_75411760_75412788_75415024_75415119_75415235_75415591_75416192_75416274
WTC11_00079646	chr7	+	1739	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	-23	5	7	0	multi-exon	FALSE	canonical	3	282	junction_3	10.0332779621949	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGTGCTGGCGTGTGC	75875648	True	NA	6	True	TATAAA	-15	NA	75879010	75888921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
WTC11_00079649	chr7	+	2596	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	-65	1	-50	0	multi-exon	FALSE	canonical	3	265	junction_1	58.9690337276736	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTATTGTGTGA	75903938	True	NA	25	True	AATAAA	-15	NA	75915098	75986854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
WTC11_00079656	chr7	+	2191	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	-21	0	0	0	multi-exon	FALSE	canonical	3	2650	junction_8	101.343398280302	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	76024841	True	NA	19	True	AATAAA	-23	NA	76048084	76067508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
WTC11_00079657	chr7	+	2068	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	-48	0	-14	0	multi-exon	FALSE	canonical	3	98	junction_1	911.988207048709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	76024793	True	NA	17	True	AATAAA	-21	NA	76048036	76067506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
WTC11_00079660	chr7	+	3181	4	ISM	ENSG00000177679.16	ENST00000611745.2	3617	15	78763	-1	-1955	0	3prime_fragment	FALSE	canonical	3	18	junction_1	20.7417989148054	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	76280577	False	NA	23	True	AATAAA	-18	NA	76280658	76287288	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_76281803_76282647_76282873_76282963_76283102_76285614
WTC11_00079661	chr7	+	3279	5	NNC	ENSG00000177679.16	novel	2150	4	NA	NA	-1955	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	18.0329559418305	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	76280577	False	NA	23	True	AATAAA	-18	NA	76280658	76287288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76281803_76282647_76282873_76282963_76283102_76283523_76283622_76285614
WTC11_00079664	chr7	+	1759	2	FSM	ENSG00000106211.10	ENST00000447574.1	1455	2	-304	0	-289	0	multi-exon	FALSE	canonical	3	3551	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTCTCAAATAAAGTTC	76302372	False	NA	30	True	NA	NA	NA	76302383	76304260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76303866_76303983
WTC11_00079665	chr7	+	366	1	FSM	ENSG00000106211.10	ENST00000675417.1	1089	1	725	-2	353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCCCAGGCCCTGGTG	76303909	False	NA	65	True	AATAAA	-20	NA	76303929	76304295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76303900_76304300
WTC11_00079666	chr7	+	2550	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	48.3505716385833	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461658	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00079667	chr7	+	2735	12	NIC	ENSG00000091073.20	novel	2769	12	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	93.2721070332027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461658	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76463544_76463710_76470299_76470420_76477113_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00079669	chr7	+	2773	12	FSM	ENSG00000091073.20	ENST00000324432.9	2769	12	-4	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	100.663090809093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457822	True	NA	24	True	AATAAA	-16	NA	76461696	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76463544_76463710_76470299_76470420_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00079670	chr7	+	2368	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	59.1349093175934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461675	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00079674	chr7	+	2682	3	FSM	ENSG00000205485.13	ENST00000418663.5	2667	3	-15	0	-15	0	multi-exon	FALSE	canonical	1	5	junction_2	3.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	NA	False	NA	10	True	CATAAA	-16	NA	76549344	76627982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76549862_76551419_76551523_76625920
WTC11_00079678	chr7	+	2306	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	10	0	10	0	multi-exon	FALSE	canonical	2	8	junction_1	70.3301163052897	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	77537906	True	NA	NA	False	NA	NA	NA	77538044	77639280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
WTC11_00079681	chr7	+	6422	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	83	junction_1	14.7841614091374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	77694375	True	NA	12	True	AATAAA	-21	NA	77696442	77783022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
WTC11_00079683	chr7	+	5091	18	FSM	ENSG00000006576.16	ENST00000307305.12	4793	18	-44	-254	-31	-24	multi-exon	FALSE	canonical	3	52	junction_13	18.7349016488581	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAGCTCATTGTGAAA	77796483	True	NA	NA	False	AATACA	-23	NA	77798760	77957479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
WTC11_00079685	chr7	+	4554	17	FSM	ENSG00000006576.16	ENST00000275575.11	4541	17	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	30.0686064484206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	77796610	True	NA	21	True	AATAAA	-16	NA	77798887	77957225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77951616_77951713_77953768_77953895_77954857
WTC11_00079692	chr7	+	3933	18	FSM	ENSG00000135164.19	ENST00000579677.5	3915	18	-18	0	-15	0	multi-exon	TRUE	canonical	3	34	junction_9	51.4141875859291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	13	True	AATAAA	-17	NA	87152393	87196325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182055_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
WTC11_00079693	chr7	+	641	6	FSM	ENSG00000135164.19	ENST00000414630.6	627	6	-14	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	88.3266664150754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATAAAAGGCTTTGTTT	87148770	True	NA	NA	False	AATAGA	-23	NA	87152425	87166520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87154389_87154529_87163238_87163333_87163494_87163618_87164933_87165051_87166482
WTC11_00079700	chr7	+	3715	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	-13	0	0	0	multi-exon	FALSE	canonical	3	119	junction_9	38.2007989191625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148784	True	NA	13	True	AATAAA	-17	NA	87152439	87196325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
WTC11_00079707	chr7	+	2370	1	FSM	ENSG00000135164.19	ENST00000580010.1	2370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAAGATTTGTTTTT	87193930	False	NA	11	True	AATAAA	-15	NA	87193953	87196323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87194000_87196300
WTC11_00079711	chr7	+	2416	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	-74	0	-27	0	multi-exon	FALSE	canonical	3	40	junction_2	96.5414311779367	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87871203	True	NA	33	True	AATAAA	-24	NA	87876459	87908373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
WTC11_00079712	chr7	+	3661	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	-6	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	36.454432101388	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	87871230	True	NA	NA	False	AATAAA	-28	NA	87876486	87909553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
WTC11_00079713	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	62.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	87876540	False	NA	NA	False	NA	NA	NA	87876582	87885183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878226_87884978
WTC11_00079714	chr7	+	2354	11	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	100.400996010996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATATATGTTCGTAAT	87871231	True	NA	32	True	AATAAA	-23	NA	87876487	87908372	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
WTC11_00079715	chr7	+	2507	12	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	92.4626348476789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87871201	True	NA	33	True	AATAAA	-24	NA	87876457	87908373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897296_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
WTC11_00079718	chr7	+	9373	31	FSM	ENSG00000008277.15	ENST00000398209.7	9144	31	-91	-138	0	138	multi-exon	FALSE	canonical	3	12	junction_28	6.94014088873962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGAGTGCTCGATTT	87933450	False	NA	NA	False	AATACA	-11	NA	87934328	88203027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87934551_87935025_87935187_87978335_87978413_88075625_88075693_88108175_88108259_88114583_88114648_88116744_88116815_88125588_88125660_88128601_88128677_88130387_88130460_88131268_88131436_88132866_88132952_88134328_88134420_88135979_88136032_88143025_88143126_88145124_88145197_88145414_88145508_88148976_88149058_88150980_88151032_88151256_88151321_88153220_88153327_88155886_88156007_88163011_88163181_88165831_88165947_88168136_88168228_88171543_88171562_88181504_88181606_88181957_88182025_88186614_88186702_88193115_88193240_88196470
WTC11_00079721	chr7	+	6984	6	FSM	ENSG00000157214.14	ENST00000394621.7	6984	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	12.6554336156451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGCCTTCTAATACTTT	90210846	True	NA	77	True	ATTAAA	-20	NA	90211739	90237683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90212046_90216490_90216604_90225049_90225575_90226970_90227499_90229871_90230037_90232336
WTC11_00079728	chr7	+	3507	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	-19	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397714	True	NA	32	True	ATTAAA	-17	NA	90403447	90415954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405613_90412643
WTC11_00079732	chr7	+	2079	6	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	316	14039	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_5	85.9967441244144	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTCTTTTTTATATT	90596597	False	NA	3	True	ATTAAA	-15	NA	90596636	90804667	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90803123
WTC11_00079733	chr7	+	1193	9	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	332	-6177	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_8	67.267655674923	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCAGTGTCTTCTGG	90596550	False	NA	NA	False	AATAAA	-18	NA	90596652	90949616	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90949224
WTC11_00079740	chr7	+	642	6	FSM	ENSG00000001629.10	ENST00000413588.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	24.9911984506546	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCAGAAGAACGTAAGAG	92343125	True	NA	NA	False	NA	NA	NA	92343137	92362260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92343233_92344977_92345067_92347946_92348017_92350949_92351095_92352475_92352643_92362184
WTC11_00079742	chr7	+	4590	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	-19	0	19	multi-exon	FALSE	canonical	3	87	junction_2	9.75961064797157	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTGAAAGGCTTTTC	92445430	True	NA	NA	False	NA	NA	NA	92447481	92460094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
WTC11_00079750	chr7	+	616	2	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	93636340	True	NA	5	True	AATAAA	-17	NA	93640251	93645511	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_93640492_93645135
WTC11_00079751	chr7	+	5343	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACATGAATTTTATGCA	93636313	True	NA	61	True	NA	NA	NA	93640224	93645567	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_93640200_93645600
WTC11_00079765	chr7	+	10783	19	NIC	ENSG00000158528.12	novel	10547	20	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	4.01386485959743	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTCCCTCTTCCAT	94906291	True	NA	27	True	AATAAA	-27	NA	94907628	95296414	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_94908140_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95269206_95269508_95273898_95273987_95274084_95274169_95284017_95284217_95286205_95286326_95288535_95288719_95290090
WTC11_00079773	chr7	+	616	4	FSM	ENSG00000196367.14	ENST00000480695.1	805	4	189	0	189	0	multi-exon	FALSE	canonical	3	65	junction_1	14.8174071805952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTCCCTGAATACCAG	98976137	False	NA	NA	False	GATAAA	-38	NA	98976148	98978280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_98976269_98976482_98976771_98976938_98977077_98978210
WTC11_00079774	chr7	+	2743	3	ISM	ENSG00000196367.14	ENST00000360902.2	8242	27	39694	23234	-4737	0	internal_fragment	FALSE	canonical	3	160	junction_2	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCCCTTGTTTATGTT	99009859	False	NA	84	True	AATAAA	-18	NA	99009880	99013243	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_99011256_99011340_99011536_99012070
WTC11_00079778	chr7	+	1669	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	291.879786898648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	99365771	True	NA	NA	False	AATAAA	-35	NA	99374674	99394801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
WTC11_00079784	chr7	+	1534	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	-23	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	54.9080038690981	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	99365803	True	NA	NA	False	AAAAAG	-15	NA	99374706	99394816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
WTC11_00079786	chr7	+	1051	3	FSM	ENSG00000130429.15	ENST00000491294.1	1051	3	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATTATGGACATGC	99391163	False	NA	NA	False	AATAAA	-31	NA	99391177	99394797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99391254_99392670_99392877_99394028
WTC11_00079788	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	287.896925999567	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99393070	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
WTC11_00079790	chr7	+	608	4	FSM	ENSG00000106245.11	ENST00000431419.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	487.234600121497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTGATTTGTAAAAATA	99415105	False	NA	-22	True	NA	NA	NA	99415135	99419577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99415267_99416137_99416261_99417428_99417596_99419390
WTC11_00079792	chr7	+	1844	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	-21	0	0	0	multi-exon	FALSE	canonical	3	281	junction_6	201.100441956506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	99438898	False	NA	26	True	ATTAAA	-14	NA	99438921	99457373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
WTC11_00079793	chr7	+	1668	7	FSM	ENSG00000160917.15	ENST00000451876.5	1644	7	-24	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	374.569716103988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATGTCTCATTAATTA	99438898	False	NA	24	True	ATTAAA	-12	NA	99438921	99457371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450701_99450796_99452367_99452441_99454043_99454137_99456431
WTC11_00079801	chr7	+	3072	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	-78	0	-78	0	multi-exon	FALSE	canonical	2	5	junction_2	15.1730755689881	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99471437	True	NA	6	True	AATAAA	-21	NA	99472811	99482326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
WTC11_00079806	chr7	+	5159	6	ISM	ENSG00000196652.12	ENST00000394170.6	4344	7	304	-275	0	275	3prime_fragment	FALSE	canonical	3	42	junction_3	29.2068485119501	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGGGTGGCTCTTGC	99503781	True	NA	-2	True	AATAAA	-6	NA	99505253	99534097	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
WTC11_00079814	chr7	+	4518	3	FSM	ENSG00000197343.11	ENST00000252713.9	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	30	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTCAAACAAAATCTG	99554853	True	NA	15	True	AATAAA	-23	NA	99558641	99576453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99558788_99560532_99560696_99572244
WTC11_00079815	chr7	+	1250	4	NIC	ENSG00000197343.11	novel	1601	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	38.19249489974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99554882	True	NA	13	True	NA	NA	NA	99558670	99564705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99558788_99560532_99560696_99562367_99562495_99563862
WTC11_00079816	chr7	+	4624	5	FSM	ENSG00000197343.11	ENST00000425063.5	4624	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	33.4168744798193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTCTGAGAATTTGTT	99554924	True	NA	1	True	AATAAA	-9	NA	99558712	99576439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99571687_99571793_99572244
WTC11_00079818	chr7	+	4646	4	FSM	ENSG00000197343.11	ENST00000424881.5	4666	4	20	0	-17	0	multi-exon	FALSE	canonical	3	10	junction_1	13.4246870437348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTTGTTTCAAACAAAA	99558635	True	NA	11	True	AATAAA	-19	NA	99558844	99576449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99559018_99560532_99560696_99571687_99571793_99572244
WTC11_00079820	chr7	+	5722	7	FSM	ENSG00000197037.11	ENST00000481424.5	5722	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	9.17272527054468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTTGTTTCATCTCTG	99616507	True	NA	NA	False	AATAAA	-42	NA	99616945	99632399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99621575_99622548_99622641_99624056_99624181_99629190
WTC11_00079822	chr7	+	1803	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	-3	-351	0	351	multi-exon	FALSE	canonical	3	58	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTTTCCAAAAAAAAAAAAA	100012308	True	NA	NA	False	TATAAA	-38	NA	100015595	100025311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100015727_100023418_100023933_100024153
WTC11_00079825	chr7	+	9181	6	FSM	ENSG00000106261.17	ENST00000620510.1	9192	6	11	0	11	0	multi-exon	FALSE	canonical	1	4	junction_1	20.1057205789795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTGTGCTGGTTTGTT	100020131	False	NA	33	True	AATAAA	-19	NA	100023418	100041688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100023462_100023551_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
WTC11_00079827	chr7	+	2127	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	37	junction_1	42.8682574873297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCAGGACTATT	100048044	True	NA	2	True	AATAAA	-13	NA	100049783	100065035	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
WTC11_00079830	chr7	+	1131	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	-24	0	-12	0	multi-exon	FALSE	canonical	3	53	junction_1	805.352434161515	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	100059254	True	NA	9	True	AATAAA	-21	NA	100088956	100091905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
WTC11_00079840	chr7	+	3598	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	-7	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3855219513114	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	100100384	True	NA	NA	False	AAAAAG	-3	NA	100101635	100109039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
WTC11_00079848	chr7	+	1055	5	Fusion	ENSG00000235077.1_ENSG00000188186.11	novel	594	4	NA	NA	-8864	0	multi-exon	FALSE	canonical	1	2	junction_1	832.933483238608	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	100140047	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_100140440_100148848_100148976_100149498_100149580_100153399_100153518_100153866
WTC11_00079851	chr7	+	734	3	FSM	ENSG00000188186.11	ENST00000441173.1	730	3	-4	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	458.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGATGAGGCAGGCACA	100139474	True	NA	NA	False	NA	NA	NA	100148933	100154010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149580_100153399
WTC11_00079852	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	834.523949459943	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139474	True	NA	21	True	AATAAA	-21	NA	100148933	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
WTC11_00079853	chr7	+	614	4	FSM	ENSG00000188186.11	ENST00000468582.5	621	4	0	7	0	2	multi-exon	FALSE	canonical	3	216	junction_1	842.228129560051	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGACATGTGTGTTTAG	100139518	True	NA	23	True	AATAAA	-23	NA	100148977	100154205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153866
WTC11_00079854	chr7	+	629	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	-16	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	815.924424604795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139518	True	NA	21	True	AATAAA	-21	NA	100148977	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
WTC11_00079855	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	952.134560985065	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139897	False	NA	21	True	AATAAA	-21	NA	100149356	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
WTC11_00079863	chr7	+	694	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	-11	0	-11	0	multi-exon	FALSE	canonical	1	2	junction_3	45.7019328548221	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	100331432	True	NA	NA	False	AATAAA	-15	NA	100336113	100341328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
WTC11_00079864	chr7	+	3644	18	FSM	ENSG00000272752.6	ENST00000310771.8	3634	18	-10	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	48.5129027177699	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGCATCTCCCAC	100331422	True	NA	15	True	AATAAA	-22	NA	100336103	100367831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349798_100349888_100351251_100351411_100352162_100352479_100352563_100352668_100352760_100352915_100352996_100353124_100353209_100353271_100353372_100354013_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00079865	chr7	+	4565	16	NIC	ENSG00000272752.6	novel	3634	18	NA	NA	0	4	intron_retention	FALSE	canonical	3	46	junction_4	39.4465038586015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCATCTCCCACATGG	100331432	True	NA	19	True	AATAAA	-26	NA	100336113	100367835	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100354013_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00079866	chr7	+	3124	17	NNC	ENSG00000272752.6	novel	3634	18	NA	NA	45	0	intron_retention	FALSE	canonical	2	8	junction_6	49.8547891380557	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGCATCTCCCAC	100331486	True	NA	15	True	AATAAA	-22	NA	100336167	100367831	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100351411_100352264_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00079881	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	63.1402209372124	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	100601011	True	NA	8	True	AATAAA	-18	NA	100602362	100608175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00079884	chr7	+	1739	6	ISM	ENSG00000106333.13	ENST00000223061.6	1516	9	1944	4	-131	0	3prime_fragment	FALSE	canonical	3	144	junction_1	43.449280776556	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603207	True	NA	4	True	AATAAA	-14	NA	100604306	100608171	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00079885	chr7	+	2199	5	NIC	ENSG00000106333.13	novel	1516	9	NA	NA	-131	0	intron_retention	FALSE	canonical	3	206	junction_1	22.0836477965032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603207	True	NA	4	True	AATAAA	-14	NA	100604306	100608171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00079887	chr7	+	318	2	FSM	ENSG00000106333.13	ENST00000490909.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGACTCCCGGAGGCTGGG	100604973	False	NA	NA	False	NA	NA	NA	100604987	100605765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100605216_100605675
WTC11_00079888	chr7	+	960	4	FSM	ENSG00000106333.13	ENST00000472348.1	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_2	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100606137	False	NA	4	True	AATAAA	-14	NA	100606148	100608171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00079891	chr7	+	1172	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	348	junction_3	30.2438010177292	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611784	False	NA	12	True	AATAAA	-21	NA	100612521	100615377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
WTC11_00079892	chr7	+	1315	4	NIC	ENSG00000106330.12	novel	1154	5	NA	NA	20	0	intron_retention	FALSE	canonical	3	348	junction_2	18.1536650722535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611322	False	NA	12	True	AATAAA	-21	NA	100612575	100615377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100613270_100613476_100613707_100614866_100615032_100615151
WTC11_00079902	chr7	+	3285	14	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	23.6004713622569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100850452	True	NA	13	True	AATAAA	-14	NA	100852745	100867009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100852840_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
WTC11_00079904	chr7	+	4122	10	FSM	ENSG00000146828.18	ENST00000475687.5	4128	10	6	0	6	0	multi-exon	FALSE	canonical	3	52	junction_1	10.5771708509354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100853153	False	NA	13	True	AATAAA	-14	NA	100855446	100867009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
WTC11_00079912	chr7	+	1752	8	FSM	ENSG00000087077.14	ENST00000476870.5	1750	8	-2	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	228.686756619314	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAAGTCTGTTGTCTC	100859670	True	NA	14	True	AAGAAA	-26	NA	100867386	100873453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100867607_100867910_100867989_100868107_100868234_100868494_100868867_100870369_100870744_100871542_100871722_100872623_100872745_100873171
WTC11_00079916	chr7	+	2987	20	FSM	ENSG00000087087.20	ENST00000614484.4	2964	20	-23	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	243.203937313222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858191	True	NA	19	True	AATAAA	-16	NA	100875102	100888664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
WTC11_00079917	chr7	+	2978	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	-23	0	0	0	multi-exon	TRUE	canonical	3	329	junction_17	184.710314484623	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858191	True	NA	19	True	AATAAA	-16	NA	100875102	100888664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
WTC11_00079920	chr7	+	2915	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	-22	0	0	0	multi-exon	FALSE	canonical	3	329	junction_17	190.937633942085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858251	True	NA	19	True	AATAAA	-16	NA	100875162	100888664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
WTC11_00079929	chr7	+	1607	12	FSM	ENSG00000087087.20	ENST00000448764.5	1607	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	372.034566953481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGGCTCCTGACTCTC	100884952	False	NA	11	True	AATAAA	-8	NA	100884991	100888656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888277_100888384_100888473
WTC11_00079948	chr7	+	1058	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-5	0	multi-exon	FALSE	canonical	2	27	junction_1	484	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTATGAGGTCGATT	101289378	True	NA	30	True	ATTAAA	-32	NA	101299607	101304578	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101302798_101303029_101304009
WTC11_00079949	chr7	+	809	2	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	887	2	NA	NA	-2	-16	multi-exon	FALSE	canonical	3	265	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	101289381	True	NA	14	True	ATTAAA	-16	NA	101299610	101304562	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101304009
WTC11_00079950	chr7	+	3075	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	12	4	multi-exon	FALSE	canonical	3	765	junction_1	115	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGAGGTCGATTTTTT	101289395	True	NA	34	True	ATTAAA	-36	NA	101299624	101304582	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101300768_101303029_101304009
WTC11_00079952	chr7	+	5339	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	-52	-4093	-26	636	multi-exon	FALSE	canonical	3	24	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCCTGGCGACAGGATG	101308220	False	NA	-89	True	NA	NA	NA	101308243	101315436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101308549_101309613_101309695_101310483
WTC11_00079954	chr7	+	2972	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	-2	0	0	0	multi-exon	TRUE	canonical	3	179	junction_2	48.7125212057662	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357067	True	NA	19	True	AATAAA	-15	NA	101362874	101559024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
WTC11_00079958	chr7	+	2931	23	FSM	ENSG00000257923.12	ENST00000292538.9	2931	23	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_18	30.189621116213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101812594	True	NA	13	True	AATAAA	-16	NA	101816004	102283958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
WTC11_00079966	chr7	+	3430	10	FSM	ENSG00000128563.13	ENST00000496391.5	3430	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	69.2964645562817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTCTCTGTCTGGG	102362138	True	NA	17	True	AATAAA	-32	NA	102363896	102426676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102364412_102365954_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
WTC11_00079974	chr7	+	1062	7	FSM	ENSG00000161036.13	ENST00000463739.5	1062	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.1081367413855	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGGTGGCGGGCAGGC	102461458	True	NA	NA	False	NA	NA	NA	102464955	102468377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102465179_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262
WTC11_00079975	chr7	+	1999	14	NIC	ENSG00000161036.13	novel	2160	15	NA	NA	0	-36	combination_of_known_splicesites	TRUE	canonical	2	4	junction_3	66.1113459186213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAATATTTTTATTAAA	102461486	True	NA	-19	True	NA	NA	NA	102464983	102473130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102465179_102465816_102466052_102466153_102466271_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
WTC11_00079980	chr7	+	2215	8	FSM	ENSG00000222011.9	ENST00000413034.3	2211	8	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	12.0526057814254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	102748505	True	NA	15	True	AATAAA	-19	NA	102748994	102809225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102749659_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
WTC11_00079982	chr7	+	1371	9	NNC	ENSG00000222011.9	novel	1958	8	NA	NA	23	18202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	10.779030568655	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTTTGAGAGTGACT	102748570	False	NA	6	True	AATAAA	-19	NA	102749059	102827427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289_102808352_102827091
WTC11_00079984	chr7	+	2115	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	-14	15	-14	-15	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCATTCCAAAATGAGG	102912916	True	NA	5	True	AATAAA	-17	NA	102912985	102945096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
WTC11_00079994	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	45.7331461978839	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	103289837	True	NA	25	True	ATTAAA	-45	NA	103297434	103312415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
WTC11_00080004	chr7	+	1152	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	-19	0	-1	0	multi-exon	FALSE	canonical	3	55	junction_2	12.4152683776425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	105009978	True	NA	NA	False	GATAAA	-14	NA	105014188	105074777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
WTC11_00080005	chr7	+	2546	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	-23	0	5	0	multi-exon	FALSE	canonical	3	22	junction_1	24.022948212414	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	105009984	True	NA	NA	False	AATAAA	-16	NA	105014194	105091609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
WTC11_00080008	chr7	+	883	2	FSM	ENSG00000005483.22	ENST00000479838.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGACTTAAGCAATTA	NA	False	NA	15	True	AATAAA	-17	NA	105101470	105102649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105101590_105101885
WTC11_00080012	chr7	+	2878	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	-18	0	-1	0	multi-exon	TRUE	canonical	3	142	junction_5	26.3009466734254	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	105528887	True	NA	15	True	AATAAA	-16	NA	105532182	105567677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
WTC11_00080018	chr7	+	1294	2	ISM	ENSG00000128536.16	ENST00000470188.5	2199	15	-1	120593	-1	1274	5prime_fragment	FALSE	canonical	3	60	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGTTGTTTTAACTC	105875335	True	NA	NA	False	AATAAA	-16	NA	105876819	105911872	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_105877258_105911016
WTC11_00080019	chr7	+	841	1	FSM	ENSG00000273320.1	ENST00000609281.1	847	1	-320	326	-320	-326	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCGCAGTTCTCATG	106285146	False	NA	NA	False	AATACA	-15	NA	106285159	106286000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_106285200_106286000
WTC11_00080023	chr7	+	2842	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	-8	0	-5	0	multi-exon	FALSE	canonical	3	21	junction_1	48.7677147301368	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	107165542	True	NA	28	True	AATAAA	-20	NA	107168994	107202522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
WTC11_00080028	chr7	+	2288	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	-22	0	-9	0	multi-exon	FALSE	canonical	3	32	junction_1	14.549002350256	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	107562684	True	NA	113	True	AATGAA	-16	NA	107563948	107578523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
WTC11_00080030	chr7	+	1676	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.804542046215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTTAATACTAAGAAAT	107562716	True	NA	NA	False	TTTAAA	-3	NA	107563980	107577905	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
WTC11_00080035	chr7	+	5773	8	FSM	ENSG00000288558.2	ENST00000379119.6	5773	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	77.9183245849296	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATGCTCAACTTTTTA	107577627	False	NA	8	True	ATTAAA	-20	NA	107580758	107623317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
WTC11_00080044	chr7	+	3558	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	-21	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_10	106.790343733846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	107877010	True	NA	23	True	AATAAA	-33	NA	107891161	107921198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
WTC11_00080053	chr7	+	3213	12	FSM	ENSG00000006652.15	ENST00000621379.4	3232	12	19	0	19	0	multi-exon	FALSE	canonical	2	2	junction_1	68.8725016795768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	112422928	True	NA	20	True	AATAAA	-32	NA	112423162	112477200	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112423433_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
WTC11_00080055	chr7	+	3289	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	-20	0	-18	0	multi-exon	FALSE	canonical	3	148	junction_4	36.2712462673276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	NA	False	NA	23	True	AATAAA	-35	NA	112450439	112477203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
WTC11_00080059	chr7	+	4050	7	ISM	ENSG00000006652.15	ENST00000535603.5	3397	12	8184	44	-1090	0	3prime_fragment	FALSE	canonical	3	177	junction_3	28.2901631902917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTATAAATAAATAATGAA	112460219	False	NA	-24	True	NA	NA	NA	112460241	112477156	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
WTC11_00080063	chr7	+	478	3	FSM	ENSG00000135272.13	ENST00000448022.1	484	3	0	6	0	1	multi-exon	FALSE	canonical	3	20	junction_2	14	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAGAATGAATTAGCT	114922532	False	NA	NA	False	AATAAA	-24	NA	114922560	114923659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_114922637_114922926_114923128_114923458
WTC11_00080064	chr7	+	874	3	FSM	ENSG00000135269.18	ENST00000461440.5	873	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	379	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTAAGATGGTAAAG	116205281	True	NA	NA	False	NA	NA	NA	116210504	116249577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116234533_116234620_116249019
WTC11_00080065	chr7	+	596	3	FSM	ENSG00000135269.18	ENST00000455989.1	577	3	-19	0	14	0	multi-exon	FALSE	canonical	3	26	junction_1	205.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTCTCCCAGAGAGG	116205296	True	NA	NA	False	NA	NA	NA	116210519	116250288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116249019_116249273_116250160
WTC11_00080066	chr7	+	2755	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	-19	0	14	0	multi-exon	FALSE	canonical	3	379	junction_2	19.9888858007533	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205296	True	NA	NA	False	AATAAA	-17	NA	116210519	116258783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
WTC11_00080075	chr7	+	1429	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	224	0	197	0	multi-exon	FALSE	canonical	3	14	junction_1	76.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	116524839	False	NA	NA	False	AAAAAG	-8	NA	116525232	116559636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116525806_116526524_116526690_116558945
WTC11_00080076	chr7	+	2644	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	-16	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	116526070	False	NA	13	True	AATAAA	-15	NA	116526276	116561176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116526690_116558945
WTC11_00080092	chr7	+	2125	15	FSM	ENSG00000004866.22	ENST00000393451.7	2110	15	-15	0	0	0	multi-exon	FALSE	canonical	3	54	junction_14	18.4679811168035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	116952339	True	NA	3	True	AATAAA	-21	NA	116953326	117230103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
WTC11_00080094	chr7	+	2656	15	NIC	ENSG00000004866.22	novel	2899	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_14	19.4731631131836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTAGTGGTCTCTGC	116953477	False	NA	NA	False	AATAAA	-19	NA	116953500	117223907	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117222860
WTC11_00080096	chr7	+	303	1	FSM	ENSG00000273596.1	ENST00000615322.1	200	1	-103	0	-103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGTTTTTGTTTTTG	116954353	False	NA	NA	False	AGTAAA	-45	NA	116954376	116954679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116954400_116954700
WTC11_00080098	chr7	+	1689	14	FSM	ENSG00000004866.22	ENST00000490039.1	1689	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	35.0343871649508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	NA	False	NA	3	True	AATAAA	-21	NA	117099761	117230103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117229761
WTC11_00080101	chr7	+	1932	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	-12	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	33.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177795	True	NA	29	True	ATTAAA	-29	NA	118184143	118192164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_118185695_118188277_118188406_118191911
WTC11_00080107	chr7	+	1731	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	-13	0	-5	0	multi-exon	FALSE	canonical	3	22	junction_4	53.9926846896874	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	NA	False	NA	NA	False	TATAAA	-22	NA	120950771	120975290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
WTC11_00080117	chr7	+	7866	29	FSM	ENSG00000106278.12	ENST00000652298.1	7866	29	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_15	142.491115906378	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAATATTGCCATTAA	121873276	False	NA	-11	True	NA	NA	NA	121873356	122062016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
WTC11_00080118	chr7	+	7822	30	FSM	ENSG00000106278.12	ENST00000651320.1	7822	30	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_22	169.463734155178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAAATGGTTTTTATCC	121873253	True	NA	-48	True	NA	NA	NA	121873480	122061979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
WTC11_00080130	chr7	+	567	4	NNC	ENSG00000232524.1	novel	451	3	NA	NA	-16171	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0.816496580927726	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATTTATTAACAAAATAT	123440428	True	NA	NA	False	AATAAA	-35	NA	123440457	123459855	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_123440571_123456624_123456766_123457398_123457549_123459692
WTC11_00080133	chr7	+	9777	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6124	154587	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	150.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTAAATTTCTTTCT	125917508	True	NA	5	True	AATAGA	-22	NA	125923994	126088419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_126078869
WTC11_00080134	chr7	+	2817	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3838	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTATATAACAATCATTAC	125926538	False	NA	NA	False	NA	NA	NA	125926548	125929365	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_125926500_125929400
WTC11_00080136	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_3	96.2366873910361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	127571095	True	NA	3	True	NA	NA	NA	127588385	127591681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
WTC11_00080137	chr7	+	569	5	FSM	ENSG00000004059.11	ENST00000489673.1	566	5	-27	24	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	93.9078670825826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGTCCTGCCCACCTG	127571095	True	NA	NA	False	GGGGCT	-23	NA	127588385	127591088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962
WTC11_00080138	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	86.751599408887	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	127571120	True	NA	22	True	AATAAA	-17	NA	127588410	127591700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
WTC11_00080144	chr7	+	1588	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	2	0	2	0	multi-exon	TRUE	canonical	3	90	junction_5	131.633070715996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	128471271	True	NA	NA	False	AATAAA	-12	NA	128476730	128502126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
WTC11_00080153	chr7	+	3709	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	-40	-1231	31	0	multi-exon	FALSE	canonical	3	442	junction_3	897.549147524648	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTATTGTTTACAA	128703619	True	NA	-36	True	AAAACA	-12	NA	128739322	128771807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
WTC11_00080159	chr7	+	3320	14	FSM	ENSG00000128596.17	ENST00000494552.5	3320	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	17.4603523826251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAGACTGTGGATTT	128801183	False	NA	NA	False	ATTAAA	-12	NA	128801209	128822125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128809449_128809645_128810138_128810367_128811799_128812313_128812707_128812930_128814637_128814920_128815613_128815932_128821798
WTC11_00080162	chr7	+	8715	6	ISM	ENSG00000128596.17	ENST00000494552.5	3320	14	7476	1	-481	-1	intron_retention	FALSE	canonical	3	32	junction_5	5.38887743412299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATGAGACTGTGGATT	NA	False	NA	NA	False	ATTAAA	-11	NA	128808685	128822124	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_128809645_128810138_128810367_128811799_128812313_128812707_128812930_128814637_128814920_128815613
WTC11_00080167	chr7	+	703	3	NNC	ENSG00000128524.5	novel	711	3	NA	NA	0	9752	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	941.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGCTTGTCTTAACAT	128844337	True	NA	NA	False	NA	NA	NA	128862855	128875599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_128863063_128865376_128865845_128875571
WTC11_00080172	chr7	+	5026	17	FSM	ENSG00000158467.17	ENST00000446544.6	5026	17	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	19.3289775984143	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGGGTATTTCTTGT	129222036	True	NA	4	True	AATAAA	-17	NA	129225049	129430211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_129225440_129379640_129379750_129389055_129389200_129389633_129389735_129397221_129397325_129400289_129400385_129403378_129403486_129405096_129405214_129405835_129405900_129406377_129406467_129409475_129409547_129413593_129413689_129422839_129422939_129424873_129424943_129425062_129425142_129426442_129426564_129427038
WTC11_00080183	chr7	+	3564	12	FSM	ENSG00000106459.15	ENST00000353868.5	3568	12	0	4	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.0133129985723	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	NA	False	NA	14	True	AATAAA	-19	NA	129630077	129757076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_129630169_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129744172_129744230_129755017
WTC11_00080202	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	28.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	134644384	True	NA	28	True	AATAAA	-40	NA	134646852	134679816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134646938_134661446_134662109_134678852
WTC11_00080207	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	254.574204329905	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	134756550	True	NA	12	True	AATAAA	-25	NA	134779633	134970729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
WTC11_00080208	chr7	+	4245	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	-44	-87	0	0	multi-exon	FALSE	canonical	3	467	junction_3	124.61980049156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTGAGTCTTGGT	134756550	True	NA	11	True	AATAAA	-24	NA	134779633	134970728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
WTC11_00080210	chr7	+	4281	13	FSM	ENSG00000122786.20	ENST00000393118.6	4281	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	272.468142888098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTGAGTCTTGGT	134887789	True	NA	11	True	AATAAA	-24	NA	134891399	134970728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
WTC11_00080212	chr7	+	2669	7	FSM	ENSG00000122786.20	ENST00000466704.1	903	7	0	-1766	0	0	multi-exon	FALSE	canonical	3	110	junction_6	251.151127588329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	134950336	True	NA	40	True	AATAAA	-21	NA	134950374	134970641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553
WTC11_00080218	chr7	+	1855	8	FSM	ENSG00000155561.15	ENST00000461255.5	1447	8	-412	4	-412	0	multi-exon	FALSE	canonical	3	591	junction_5	50.2304891556545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	135634853	False	NA	NA	False	AATAAA	-21	NA	135634902	135648753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
WTC11_00080221	chr7	+	450	1	FSM	ENSG00000279483.2	ENST00000623936.2	75	1	-45	-330	-45	330	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGGACCACTGTTGTAT	137433157	True	NA	42	True	AATAAA	-14	NA	137513813	137514263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_137513800_137514300
WTC11_00080224	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_9	144.863633194195	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	138460312	False	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
WTC11_00080226	chr7	+	451	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTCTACTTTCCT	139035811	False	NA	10	True	AATAAA	-18	NA	139035832	139036950	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_139035986_139036652
WTC11_00080232	chr7	+	1126	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	-142	-524	-142	-14	multi-exon	FALSE	canonical	3	59	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTTTCCTTTGTCCTT	139340269	True	NA	NA	False	AATAAA	-6	NA	139340307	139346314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139340620_139345500
WTC11_00080233	chr7	+	1449	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	-435	0	325	0	multi-exon	FALSE	canonical	3	558	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	139340890	False	NA	NA	False	AATAAA	-20	NA	139340901	139346328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139341523_139345500
WTC11_00080235	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	63.8783566197851	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	139347401	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
WTC11_00080236	chr7	+	2783	11	FSM	ENSG00000146963.18	ENST00000619796.4	2783	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	317.14482496172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACTTAAGTTTCTGC	139359688	False	NA	32	True	AATAAA	-22	NA	139359845	139423457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
WTC11_00080237	chr7	+	584	2	FSM	ENSG00000146963.18	ENST00000435096.1	570	2	-14	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTATTATAGTAGCAG	139347401	True	NA	NA	False	AAAAAG	-13	NA	139359893	139374555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139360323_139374400
WTC11_00080238	chr7	+	3410	9	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	56	3628	38	-2685	5prime_fragment	FALSE	canonical	3	683	junction_1	59.7201808436646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGCACTTTCTCATCTT	139347457	True	NA	19	True	ATTAAA	-13	NA	139359949	139419826	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537
WTC11_00080241	chr7	+	2837	9	FSM	ENSG00000146963.18	ENST00000498518.1	2837	9	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_8	53.065849423146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTGTGGGCATTTCCT	139375193	False	NA	22	True	ATTAAA	-34	NA	139375203	139423201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
WTC11_00080243	chr7	+	2645	4	NNC	ENSG00000146955.11	novel	2661	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.9652400197707	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTGTACTGCCCCT	140404021	False	NA	16	True	ATTAAA	-29	NA	140404031	140427974	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_140404218_140407623_140407812_140411879_140412058_140425881
WTC11_00080245	chr7	+	2585	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	67	junction_4	4.89064079103534	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	140672492	True	NA	16	True	AATAAA	-16	NA	140672933	140695110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
WTC11_00080246	chr7	+	485	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	-20	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_3	466.612139671579	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140671714	True	NA	23	True	ATTAAA	-33	NA	140696687	140706643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
WTC11_00080247	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	1761.85981281145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	140671774	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
WTC11_00080248	chr7	+	440	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	36	junction_1	1753.45075652428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	140671994	False	NA	26	True	ATTAAA	-36	NA	140696967	140706646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
WTC11_00080249	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1765.2944985658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	140697205	False	NA	24	True	ATTAAA	-34	NA	140697223	140706644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
WTC11_00080255	chr7	+	891	7	FSM	ENSG00000106028.11	ENST00000612337.4	884	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	153	junction_1	1390.42447555494	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	141680457	True	NA	43	True	NA	NA	NA	141738326	141750488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738594_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
WTC11_00080264	chr7	+	808	5	Fusion	ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.3224014329016	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796344	True	NA	18	True	AATAAA	-29	NA	142796364	142802748	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
WTC11_00080265	chr7	+	1166	5	Fusion	ENSG00000211768.1_ENSG00000211772.11_ENSG00000211766.1_ENSG00000211767.1	novel	758	4	NA	NA	-58	-1	multi-exon	FALSE	canonical	3	17	junction_1	45.8059766842712	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGAGTGTCTGTGGAGTT	142796615	False	NA	17	True	AATAAA	-28	NA	142796638	142802747	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
WTC11_00080267	chr7	+	3881	19	NIC	ENSG00000106123.12	novel	3999	20	NA	NA	0	0	intron_retention	TRUE	canonical	3	30	junction_2	16.5242993538547	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGGTGTGGTGAGGCC	142855050	False	NA	10	True	ATTAAA	-20	NA	142855075	142871092	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_142855386_142861051_142861187_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
WTC11_00080269	chr7	+	1040	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	-8	0	4	0	multi-exon	FALSE	canonical	3	210	junction_4	27.6028688245794	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260834	True	NA	22	True	AATAAA	-23	NA	143263432	143269115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
WTC11_00080270	chr7	+	1208	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	-23	0	4	0	multi-exon	FALSE	canonical	3	225	junction_3	24.2653158964716	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260834	True	NA	22	True	AATAAA	-23	NA	143263432	143269115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
WTC11_00080273	chr7	+	431	1	FSM	ENSG00000239419.3	ENST00000479087.3	296	1	-83	-52	-83	52	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCCACATCTTAACAGGA	143288226	False	NA	NA	False	AGTAAA	-45	NA	143290531	143290962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143290500_143291000
WTC11_00080281	chr7	+	2221	10	NNC	ENSG00000159840.16	novel	2228	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	673	junction_1	199.584815969132	76	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	143367482	True	NA	17	True	AATAAA	-22	NA	143381348	143391111	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_143381410_143381559_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
WTC11_00080290	chr7	+	797	4	FSM	ENSG00000244198.7	ENST00000474656.5	773	4	-24	0	13	0	multi-exon	FALSE	canonical	3	326	junction_1	165.572407792549	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCTGATACT	144195323	False	NA	NA	False	AAGAAA	-44	NA	144195333	144214223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144214013
WTC11_00080291	chr7	+	839	6	FSM	ENSG00000244198.7	ENST00000464929.5	819	6	-20	0	13	0	multi-exon	FALSE	canonical	3	196	junction_3	180.666543665395	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195323	False	NA	NA	False	AATAAA	-15	NA	144195333	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144239042_144239096_144239274_144239389_144243746
WTC11_00080294	chr7	+	546	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	192.658214203288	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195509	False	NA	NA	False	AATAAA	-15	NA	144195519	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144207692_144207805_144239042_144239096_144239274_144239389_144243746
WTC11_00080295	chr7	+	588	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_2	195.080040553159	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195414	False	NA	NA	False	AATAAA	-15	NA	144195424	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
WTC11_00080296	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	260	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-22	True	ATTAAA	-42	NA	144195596	144255116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144195702_144207692_144207805_144250439
WTC11_00080297	chr7	+	576	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-49	-10	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	78.6650335282456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTAAATAAATTACCCA	NA	False	NA	NA	False	AATAAA	-5	NA	144195838	144243821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144207692_144207805_144239039_144239096_144239274_144239389_144243746
WTC11_00080298	chr7	+	3193	5	NNC	ENSG00000244198.7	novel	556	3	NA	NA	-24	10	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	310.463665345882	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTAATATGGTAGT	NA	False	NA	NA	False	ATTAAA	-23	NA	144195863	144216667	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_144196058_144199749_144199876_144200170_144200278_144207692_144207805_144214013
WTC11_00080299	chr7	+	3388	4	NIC	ENSG00000244198.7	novel	556	3	NA	NA	129	484	combination_of_known_splicesites	FALSE	canonical	3	278	junction_1	186.935520671939	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATAGAAAGTCTTCGGC	NA	False	NA	NA	False	NA	NA	NA	144196016	144217141	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144200170_144200278_144207692_144207805_144214013
WTC11_00080302	chr7	+	2029	3	FSM	ENSG00000228960.6	ENST00000641566.1	2029	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	15	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCCCGGGTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	144296279	144300934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144296543_144298483_144298681_144299365
WTC11_00080304	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	176.289013629695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	144344241	True	NA	12	True	AATAAA	-20	NA	144355401	144380632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
WTC11_00080306	chr7	+	5045	12	ISM	ENSG00000050327.15	ENST00000056217.10	5482	15	61	4423	61	-3847	5prime_fragment	FALSE	canonical	3	329	junction_10	97.6490596113204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTGAGAGTATTAATA	144344302	True	NA	NA	False	AATAAA	-25	NA	144355462	144376209	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513
WTC11_00080313	chr7	+	3299	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	-258	106	0	0	multi-exon	FALSE	canonical	3	455	junction_1	53.5740740087562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	148698484	True	NA	-12	True	NA	NA	NA	148698644	148801004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
WTC11_00080314	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	113.574633078481	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	148698484	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
WTC11_00080315	chr7	+	3080	21	FSM	ENSG00000055130.18	ENST00000662132.1	3080	21	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	125.588803242964	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGATTGTGCAAATT	148692677	True	NA	2	True	AATAAA	-3	NA	148698896	148801088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
WTC11_00080331	chr7	+	4742	16	ISM	ENSG00000133619.18	ENST00000319551.12	4020	17	3457	4	-908	0	3prime_fragment	FALSE	canonical	3	27	junction_12	7.60876687337267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149717210	False	NA	13	True	ATTAAA	-16	NA	149718513	149734571	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
WTC11_00080333	chr7	+	3434	15	FSM	ENSG00000133619.18	ENST00000485033.6	3434	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	12.6726847501037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149719626	True	NA	13	True	ATTAAA	-16	NA	149719638	149734571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149730146_149730342_149730427_149730569_149731671_149731777_149733205
WTC11_00080344	chr7	+	3220	2	FSM	ENSG00000214022.12	ENST00000444957.3	2969	2	-256	5	-256	0	multi-exon	FALSE	canonical	3	136	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150368522	False	NA	21	True	AATAAA	-16	NA	150368533	150374039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150371227
WTC11_00080345	chr7	+	3292	4	FSM	ENSG00000214022.12	ENST00000397281.6	3292	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	63.5102791330313	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGGAGTGTTACTTTT	150362039	True	NA	26	True	AATAAA	-21	NA	150368789	150374044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150369670_150369869_150370759_150370885_150371227
WTC11_00080349	chr7	+	3418	3	FSM	ENSG00000214022.12	ENST00000489432.7	3130	3	-288	0	-256	0	multi-exon	FALSE	canonical	3	112	junction_2	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150368522	False	NA	21	True	AATAAA	-16	NA	150368533	150374039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150369670_150369869_150371227
WTC11_00080350	chr7	+	3161	3	NIC	ENSG00000214022.12	novel	899	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150362109	True	NA	21	True	AATAAA	-16	NA	150368859	150374039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_150369014_150369670_150369869_150371230
WTC11_00080355	chr7	+	2307	3	FSM	ENSG00000196456.13	ENST00000329630.10	2261	3	-46	0	-46	0	multi-exon	FALSE	canonical	3	84	junction_1	7.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	150379269	False	NA	7	True	AATAAA	-15	NA	150379283	150398630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150379393_150388421_150388502_150396512
WTC11_00080356	chr7	+	4668	3	NIC	ENSG00000284691.1	novel	1167	3	NA	NA	-31	2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	12.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAAGGAGTGGTCATT	150404428	False	NA	8	True	AATAAA	-19	NA	150404454	150412472	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_150405905_150407583_150408489_150410159
WTC11_00080362	chr7	+	1620	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	-24	0	5	0	multi-exon	FALSE	canonical	3	12	junction_9	22.7341044726384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	151027174	True	NA	18	True	CATAAA	-29	NA	151028442	151037570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
WTC11_00080370	chr7	+	3754	22	FSM	ENSG00000164889.15	ENST00000677246.1	3754	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_16	91.4057511203123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGGCCTTTTGTCTTT	151061914	False	NA	5	True	AGTAAA	-19	NA	151061924	151076526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074100_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
WTC11_00080372	chr7	+	4387	22	FSM	ENSG00000164889.15	ENST00000461735.1	4387	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	87.3894507350472	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151061197	True	NA	2	True	AGTAAA	-16	NA	151062633	151076523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151063190_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
WTC11_00080380	chr7	+	2309	9	FSM	ENSG00000133612.19	ENST00000473312.5	2039	9	-267	-3	0	0	multi-exon	FALSE	canonical	3	81	junction_8	47.9452813110946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTCAGTTCCTTCCC	151084861	True	NA	27	True	AATAAA	-15	NA	151086474	151123638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724
WTC11_00080381	chr7	+	3494	18	FSM	ENSG00000133612.19	ENST00000397238.7	3494	18	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_11	48.3624579156202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	151084861	True	NA	15	True	AATAAA	-17	NA	151086474	151144434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00080383	chr7	+	2698	9	FSM	ENSG00000133612.19	ENST00000335367.7	2675	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	21	junction_1	72.7955184060118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTCAGTTCCTTCCC	151114578	True	NA	27	True	AATAAA	-15	NA	151114654	151123638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151115642_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724
WTC11_00080393	chr7	+	1707	7	FSM	ENSG00000133612.19	ENST00000461065.1	1707	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	56.2435181450568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCCCCCTTTTACAT	151134409	False	NA	17	True	AATAAA	-19	NA	151134424	151144436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151134569_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00080395	chr7	+	3751	5	FSM	ENSG00000133612.19	ENST00000473633.1	3751	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	5.21416340365355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTTTCCCCCTTTT	151139557	False	NA	13	True	AATAAA	-15	NA	151139567	151144432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00080403	chr7	+	1749	9	FSM	ENSG00000013374.17	ENST00000470316.5	1752	9	3	0	3	0	multi-exon	FALSE	canonical	2	8	junction_4	182.28544751296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTCCAAAGGTGACCA	151339924	False	NA	10	True	AATAAA	-16	NA	151345347	151361237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151345467_151349072_151349241_151351423_151351483_151352092_151352194_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
WTC11_00080408	chr7	+	2821	13	NIC	ENSG00000178234.13	novel	2739	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	91.6510213921385	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021920	True	NA	13	True	AATAAA	-16	NA	152025713	152122340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_152025885_152027596_152027719_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
WTC11_00080414	chr7	+	2108	11	NNC	ENSG00000133627.18	novel	1692	11	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	100.485272552748	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTCTGCTGTAGTGT	152754683	True	NA	15	True	AATAAA	-21	NA	152759791	152855373	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_152759927_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820302_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
WTC11_00080416	chr7	+	2278	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	155001818	True	NA	26	True	AATAAA	-38	NA	155003425	155005703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155003400_155005700
WTC11_00080419	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	39.1867324486235	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	155292160	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
WTC11_00080422	chr7	+	10373	18	NIC	ENSG00000184863.11	novel	10168	18	NA	NA	38	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_14	63.0547079429572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCCGTAGCCTTCA	155644320	True	NA	14	True	AATAAA	-16	NA	155644488	155781480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772_155700945_155706859_155707069_155711172_155711456_155718384_155718444_155737529_155737663_155738059_155738404_155739714_155740027_155741818_155742107_155744960_155745603_155763808_155764019_155766466_155766656_155774558_155774648_155774992
WTC11_00080425	chr7	+	10130	18	NIC	ENSG00000184863.11	novel	10168	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	62.0203672317175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCCGTAGCCTTCA	155636412	True	NA	14	True	AATAAA	-16	NA	155644701	155781480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772_155700945_155706859_155707069_155711202_155711456_155718384_155718444_155737529_155737663_155738059_155738404_155739714_155740027_155741818_155742107_155744960_155745603_155763808_155764019_155766466_155766656_155774558_155774648_155774992
WTC11_00080427	chr7	+	2934	11	FSM	ENSG00000184863.11	ENST00000392761.3	2934	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	59.0397323842173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTTGAGATCCTTTTA	155700870	True	NA	NA	False	AATAAA	-19	NA	155700890	155766896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155700945_155706859_155707069_155711202_155711456_155718384_155718444_155737529_155737663_155738059_155738404_155739714_155740027_155741818_155742107_155744960_155745603_155763808_155764019_155766466
WTC11_00080431	chr7	+	714	3	FSM	ENSG00000146909.8	ENST00000475176.1	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	35	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTATCTTTTTA	156959982	False	NA	10	True	NA	NA	NA	156959995	156963352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_156960254_156962150_156962262_156963007
WTC11_00080440	chr7	+	2509	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	-20	0	18	0	multi-exon	FALSE	canonical	3	1378	junction_8	856.898671567026	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	157327644	True	NA	103	True	AATAAA	-21	NA	157336983	157417439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
WTC11_00080442	chr7	+	8005	10	FSM	ENSG00000105993.15	ENST00000459889.5	7992	10	-13	0	0	0	multi-exon	FALSE	canonical	2	30	junction_9	1206.11497517166	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGCTCGCCTGCTGTC	157327670	True	NA	97	True	AATAAA	-15	NA	157337009	157417433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157415530_157416015
WTC11_00080446	chr7	+	5185	3	FSM	ENSG00000105993.15	ENST00000487480.1	5173	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	3190	junction_2	191	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGAGCTTTTTTGTGTCT	157378102	False	NA	23	True	AATAAA	-35	NA	157378112	157386318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157382378_157384866_157385009_157385540
WTC11_00080450	chr7	-	3728	3	NNC	ENSG00000242474.3	novel	2091	3	NA	NA	0	-3	intron_retention	FALSE	canonical	3	19	junction_1	10.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGCTGTCATTTCA	-148663	True	NA	-6	True	AATAAA	-10	NA	149428	144446	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_147892_148531_148715_149328
WTC11_00080451	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	-148701	False	NA	1	True	AATAAA	-17	NA	149466	144439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_145416_148531_148619_149328
WTC11_00080452	chr7	-	3925	2	FSM	ENSG00000242474.3	ENST00000655278.1	3031	2	-26	-868	-26	-475	multi-exon	FALSE	canonical	3	41	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTAAAATAACTCTAGAA	NA	False	NA	-61	True	NA	NA	NA	149553	144918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148619_149328
WTC11_00080453	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	-148663	True	NA	-7	True	ATTAAA	-16	NA	149428	145935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_147840_148531_148619_149328
WTC11_00080456	chr7	-	2481	3	ISM	ENSG00000197461.13	ENST00000402802.7	2305	6	8432	-868	2490	868	3prime_fragment	FALSE	canonical	3	11	junction_2	1.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAGCAGTAGAGGTGGG	-510936	False	96	49	True	NA	NA	NA	510977	496389	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_498575_501115_501243_510808
WTC11_00080457	chr7	-	1111	1	Genic_Genomic	ENSG00000197461.13	novel	NA	NA	NA	NA	15874	775	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCGTGTCCATTAAAGTG	-497559	False	NA	-1	True	TATAAA	-14	NA	497593	496482	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_496500_497600
WTC11_00080458	chr7	-	2491	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	-19	0	18	multi-exon	FALSE	canonical	3	114	junction_10	119.527779197976	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCTGAAGTCTTTT	-723018	False	4263	-22	True	ATTAAA	-34	NA	727281	549178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
WTC11_00080459	chr7	-	2461	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	-544	0	0	multi-exon	FALSE	canonical	3	372	junction_10	51.2375838618489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	-723387	True	NA	-41	True	ATTAAA	-15	NA	727650	549197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
WTC11_00080462	chr7	-	485	1	FSM	ENSG00000273151.1	ENST00000609998.1	6758	1	5648	625	5648	-625	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACACTGTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	880899	880414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_880400_880900
WTC11_00080463	chr7	-	2350	11	FSM	ENSG00000105963.15	ENST00000265846.10	2349	11	0	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_10	6.31585306985525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCCGAGGATGGAG	-954391	True	NA	0	True	AATAAA	-24	NA	954680	897898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_954395
WTC11_00080464	chr7	-	4856	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	-17	0	17	multi-exon	FALSE	canonical	3	173	junction_1	10.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTTCCCCTTGGGCATG	-974228	True	NA	13	True	ATTAAA	-34	NA	975549	964834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_969457_973180_973293_975427
WTC11_00080465	chr7	-	1295	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	-1	0	1	multi-exon	FALSE	canonical	3	536	junction_4	150.157209284137	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCGTCCCCTGCCTGTGG	-1124962	True	NA	-7	True	AATAAA	-38	NA	1138257	996984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
WTC11_00080466	chr7	-	1266	5	FSM	ENSG00000146540.15	ENST00000397100.6	1264	5	0	-2	0	1	multi-exon	FALSE	canonical	3	90	junction_4	339.416687126605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCGTCCCCTGCCTGTGG	-1124962	True	NA	-7	True	AATAAA	-38	NA	1138257	996984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
WTC11_00080467	chr7	-	2138	5	FSM	ENSG00000146540.15	ENST00000397098.8	2138	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	348.432561624197	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGGGTCCTGCTCTGTG	-1124952	True	NA	-28	True	AATAAA	-17	NA	1138247	997005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1137314
WTC11_00080468	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	384.299651603046	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1027285	True	NA	-38	True	AATAAA	-7	NA	1028339	997015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
WTC11_00080470	chr7	-	1245	5	NNC	ENSG00000146540.15	novel	1294	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	378.082249649465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1124962	True	NA	-38	True	AATAAA	-7	NA	1138257	997015	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127390_1138210
WTC11_00080471	chr7	-	2629	2	FSM	ENSG00000146540.15	ENST00000465681.1	2621	2	0	-8	0	8	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACCAAAGGCACCTGG	-1027298	True	NA	-14	True	AATAAA	-33	NA	1028352	1024493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1027028_1028257
WTC11_00080472	chr7	-	879	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	-1	0	0	multi-exon	FALSE	canonical	3	133	junction_1	17.4122801493658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	-1157951	True	NA	-3	True	AATAAA	-20	NA	1160196	1152905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
WTC11_00080474	chr7	-	1855	8	FSM	ENSG00000164877.19	ENST00000479007.5	1855	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.86973158544552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGACTCCTACGTGCCT	NA	False	NA	-6	True	AATAAA	-17	NA	1439871	1434365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839
WTC11_00080475	chr7	-	2074	10	FSM	ENSG00000164877.19	ENST00000467394.5	2080	10	0	6	0	0	multi-exon	FALSE	canonical	3	12	junction_8	5.71547606649408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGACTCCTACGTGCCT	NA	False	NA	-6	True	AATAAA	-17	NA	1441524	1434365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590
WTC11_00080476	chr7	-	3096	17	FSM	ENSG00000164877.19	ENST00000297508.8	3096	17	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_10	5.88131309742986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTACGTGCCTCCGTGTT	-1458685	True	NA	1	True	AATAAA	-24	NA	1459470	1434358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590_1440685_1442191_1442485_1444651_1445429_1446712_1446829_1447574_1447766_1448619_1448762_1450239_1450289_1459183
WTC11_00080477	chr7	-	533	3	FSM	ENSG00000164877.19	ENST00000460198.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCGTCCCCCGCGCGCCA	NA	False	NA	NA	False	NA	NA	NA	1438465	1437535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1437609_1437889_1437981_1438096
WTC11_00080479	chr7	-	2296	1	FSM	ENSG00000273230.1	ENST00000609755.1	3026	1	742	-12	742	12	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTAGCAAAGCCATTTA	-1466769	False	NA	2	True	AATAAA	-28	NA	1466780	1464484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1464500_1466800
WTC11_00080480	chr7	-	6981	48	FSM	ENSG00000164880.16	ENST00000404767.8	6981	48	0	0	0	0	multi-exon	TRUE	canonical	1	135	junction_11	97.624672760285	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTGTCCC	-1492398	True	NA	-1	True	AATGAA	-16	NA	1504389	1470276	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1470693_1470845_1470956_1471132_1471225_1471570_1471642_1472272_1472387_1473071_1473185_1473565_1473694_1474167_1474361_1474704_1474839_1475947_1476072_1476228_1476456_1476569_1476658_1476793_1476919_1477549_1477674_1477752_1477937_1478365_1478507_1478725_1478886_1479429_1479685_1480316_1480442_1480834_1480934_1481341_1481489_1482545_1482708_1483741_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902_1504002_1504322
WTC11_00080481	chr7	-	7351	47	ISM	ENSG00000164880.16	ENST00000404767.8	6981	48	-49	0	-49	0	intron_retention	FALSE	canonical	1	135	junction_11	96.4366546256532	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTGTCCC	NA	False	NA	-1	True	AATGAA	-16	NA	1504438	1470276	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_1470693_1470845_1470956_1471132_1471225_1471570_1471642_1472272_1472387_1473071_1473185_1473565_1473694_1474167_1474361_1474704_1474839_1475947_1476072_1476228_1476456_1476569_1476658_1476793_1476919_1477549_1477674_1477752_1477937_1478365_1478507_1478725_1478886_1479429_1479685_1480316_1480442_1480834_1480934_1481341_1481489_1482545_1482708_1483741_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902
WTC11_00080484	chr7	-	3051	12	FSM	ENSG00000164880.16	ENST00000468115.1	3051	12	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_11	25.4753162009265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAAAGTGGTCTG	-1493827	True	NA	NA	False	NA	NA	NA	1493867	1482277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753
WTC11_00080485	chr7	-	1428	2	FSM	ENSG00000157778.9	ENST00000288607.3	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-1565584	True	NA	-2	True	ATTAAA	-21	NA	1570032	1567331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1567851_1569123
WTC11_00080486	chr7	-	937	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-1565597	True	NA	-21	True	ATTAAA	-2	NA	1570045	1567350	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_1567851_1569123_1569361_1569845
WTC11_00080487	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	184.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-1565597	True	NA	-21	True	ATTAAA	-2	NA	1570045	1567350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1567851_1569123_1569361_1570008
WTC11_00080489	chr7	-	2702	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	-7	0	5	multi-exon	FALSE	canonical	3	149	junction_18	22.9793922708109	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCCTGTGTATCTGTG	-2228532	False	4413	0	True	AATAAA	-23	NA	2232945	1815787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
WTC11_00080490	chr7	-	2761	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	1	0	0	multi-exon	FALSE	canonical	3	34	junction_18	42.6992063418305	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228561	False	NA	-7	True	AATAAA	-16	NA	2232974	1815794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
WTC11_00080491	chr7	-	2884	19	FSM	ENSG00000002822.16	ENST00000406869.5	2991	19	106	1	106	0	multi-exon	FALSE	canonical	3	17	junction_18	46.1781640984803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228724	False	NA	-7	True	AATAAA	-16	NA	2233137	1815794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230725_2232871
WTC11_00080492	chr7	-	750	6	FSM	ENSG00000002822.16	ENST00000429625.5	750	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	12.7687117596099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGCAGAGGAAGCTGGG	-2225584	False	NA	NA	False	NA	NA	NA	2225598	2215956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409
WTC11_00080495	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	105.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237792	True	NA	-1	True	AATAAA	-29	NA	2242205	2234194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2239417_2239708_2242161
WTC11_00080496	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	178	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	-2237756	True	NA	-37	True	NA	NA	NA	2242169	2234230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2239417_2239708_2241974
WTC11_00080497	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.6179077068196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	-2237776	True	NA	-21	True	CATAAA	-14	NA	2242189	2234294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
WTC11_00080498	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	16.5819178625393	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-2311631	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
WTC11_00080500	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	452	junction_13	75.0334836498949	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-2550497	True	NA	0	True	NA	NA	NA	2555524	2537809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
WTC11_00080501	chr7	-	4440	10	FSM	ENSG00000106009.16	ENST00000467558.5	4440	10	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_8	40.7988138292836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-2554425	False	5027	-43	True	ATTAAA	-21	NA	2554447	2537880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543963_2544908_2545057_2547323_2547479_2554304
WTC11_00080502	chr7	-	3324	14	NNC	ENSG00000106009.16	novel	2779	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_13	165.517906930921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-2555672	False	NA	-43	True	ATTAAA	-21	NA	2555694	2537880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555040
WTC11_00080503	chr7	-	5226	11	FSM	ENSG00000106009.16	ENST00000469750.5	5226	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_10	68.9702109609649	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-2555672	False	NA	-43	True	ATTAAA	-21	NA	2555694	2537880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
WTC11_00080505	chr7	-	1207	5	FSM	ENSG00000106009.16	ENST00000421712.1	823	5	-384	0	-384	0	multi-exon	FALSE	canonical	3	50	junction_3	269.107204474351	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCTCCAGCCCCTGGC	-2554810	False	NA	NA	False	NA	NA	NA	2554832	2542180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2542212_2543203_2543324_2543589_2543963_2547323_2547479_2554304
WTC11_00080506	chr7	-	4382	4	FSM	ENSG00000146535.14	ENST00000275364.8	4369	4	0	-13	0	13	multi-exon	FALSE	canonical	3	688	junction_1	36.7453700787218	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAACACTAAATTGA	-2835558	True	NA	NA	False	AATAAA	-41	NA	2844308	2728091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2731751_2733450_2733502_2794927_2795144_2843852
WTC11_00080508	chr7	-	4296	26	NNC	ENSG00000198286.10	novel	4287	25	NA	NA	0	58687	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.9988666399061	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATAACTCTTTAAAATG	-3042232	True	NA	NA	False	AAAAAG	-5	NA	3043845	2847454	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2847487_2906142_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
WTC11_00080509	chr7	-	5647	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	-58	-1302	-58	1302	multi-exon	FALSE	canonical	3	60	junction_13	15.9756759550957	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGGCCTGTAGCAT	-3043914	False	NA	NA	False	AATAAA	-40	NA	3043925	2904839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
WTC11_00080511	chr7	-	584	4	FSM	ENSG00000198286.10	ENST00000356408.3	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	32.3144274623924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCTTAGGACCTCTTT	-3042232	True	NA	NA	False	NA	NA	NA	3043845	2947575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2947788_2958499_2958632_2980519_2980581_3043666
WTC11_00080512	chr7	-	1504	3	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	4591074	4582514	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_4583488_4585186_4585465_4590821
WTC11_00080513	chr7	-	1004	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTTTGTTATGTACT	NA	False	NA	NA	False	NA	NA	NA	4584332	4583328	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_4583300_4584300
WTC11_00080514	chr7	-	366	2	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTTTGTTATGTACT	NA	False	NA	NA	False	NA	NA	NA	4599531	4591832	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_4591992_4599324
WTC11_00080515	chr7	-	5736	15	FSM	ENSG00000157927.17	ENST00000399583.4	5736	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_6	7.17315004950078	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTTCTTATGGGTGTT	-4883294	True	NA	NA	False	NA	NA	NA	4883716	4797054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_4799484_4799629_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822555_4832140_4832179_4834606_4835240_4836357_4836606_4877604_4878204_4883595
WTC11_00080516	chr7	-	4110	10	ISM	ENSG00000182095.15	ENST00000430969.6	10839	30	99492	-221	1232	200	3prime_fragment	FALSE	canonical	3	7	junction_6	4.23681688109725	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGGCAGGCGGATCAC	NA	False	NA	NA	False	NA	NA	NA	5324342	5306589	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5308313_5308874_5308950_5309131_5309369_5312502_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531_5320608_5321072_5321191_5324213
WTC11_00080517	chr7	-	1220	5	FSM	ENSG00000182095.15	ENST00000328270.3	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	2.73861278752583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGCACCGGGGGCCGT	-5320597	False	NA	NA	False	NA	NA	NA	5320607	5313110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531
WTC11_00080518	chr7	-	1913	7	ISM	ENSG00000182095.15	ENST00000399537.8	10572	30	53041	44498	-8478	714	internal_fragment	FALSE	canonical	1	6	junction_6	7.76029781788188	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCCTTGTCTCTCT	-5370495	False	NA	NA	False	ATTAAA	-26	NA	5370505	5351287	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374
WTC11_00080519	chr7	-	8271	5	FSM	ENSG00000155034.20	ENST00000382368.8	8270	5	0	-1	0	1	multi-exon	FALSE	canonical	3	43	junction_1	10.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTGTGTGGTCCTTCCA	-5510961	True	NA	1	True	AATAAA	-24	NA	5513809	5475795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5481932_5491230_5491450_5500487_5502032_5505411_5505631_5513656
WTC11_00080521	chr7	-	2582	1	FSM	ENSG00000207973.1	ENST00000385238.1	99	1	-1134	-1349	-1134	1349	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTATTTAATTTTAT	NA	False	NA	4	True	AATAAA	-22	NA	5497051	5494469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5494500_5497100
WTC11_00080522	chr7	-	2021	5	FSM	ENSG00000075624.17	ENST00000642480.2	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	29792	junction_3	386.355082793018	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-5529884	False	NA	-4	True	AATAAA	-22	NA	5529949	5527146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534
WTC11_00080523	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_5	1574.97801889423	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-4934653	True	NA	-5	True	AATAAA	-21	NA	5530601	5527147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
WTC11_00080524	chr7	-	2271	5	FSM	ENSG00000075624.17	ENST00000477812.2	2271	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	12742.1444697311	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	-5530525	False	NA	-9	True	AATAAA	-17	NA	5530590	5527151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5529060_5529160_5529664_5530523
WTC11_00080525	chr7	-	2249	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	-4	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1755.59681803653	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	-4934653	True	NA	-9	True	AATAAA	-17	NA	5530601	5527151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
WTC11_00080526	chr7	-	1849	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	-4	0	0	multi-exon	FALSE	canonical	3	65	junction_4	13718.430522476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	-4934653	True	NA	-9	True	AATAAA	-17	NA	5530601	5527151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
WTC11_00080527	chr7	-	1495	6	FSM	ENSG00000075624.17	ENST00000493945.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	12125.1253288368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGATTGCACATTGT	-4934654	True	NA	-48	True	NA	NA	NA	5530602	5527535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529734_5530523
WTC11_00080528	chr7	-	1300	5	FSM	ENSG00000075624.17	ENST00000432588.6	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1595.48848319253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTATGACGAGTCCGGC	-5530562	False	NA	NA	False	NA	NA	NA	5530627	5527797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
WTC11_00080529	chr7	-	561	5	FSM	ENSG00000075624.17	ENST00000484841.6	561	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	12948.3005255516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGAGACCTTCAACAC	-4934653	True	NA	NA	False	NA	NA	NA	5530601	5528716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5528720_5529018_5529060_5529160_5529401_5529534_5529734_5530523
WTC11_00080533	chr7	-	5786	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	-9	0	9	multi-exon	FALSE	canonical	3	74	junction_14	40.2103842309421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTCTCCACCCCGCCAT	-5777626	True	NA	3	True	AATAAA	-28	NA	5781663	5620037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
WTC11_00080534	chr7	-	5615	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	33	-9	0	9	multi-exon	FALSE	canonical	3	129	junction_14	31.5693061968425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTCTCCACCCCGCCAT	-5777626	True	NA	3	True	AATAAA	-28	NA	5781663	5620037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
WTC11_00080535	chr7	-	3104	16	FSM	ENSG00000011275.19	ENST00000389900.8	3104	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	56.6977953716015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGACGGATCCATAATA	NA	False	NA	-50	True	NA	NA	NA	5761138	5622694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739622_5740972_5741645_5752845_5752980_5761002
WTC11_00080536	chr7	-	5089	15	FSM	ENSG00000122512.16	ENST00000265849.12	5093	15	0	4	0	-4	multi-exon	FALSE	canonical	3	74	junction_14	21.3555900056588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATGGTAATTTGTT	-6006457	True	NA	NA	False	AATAAA	-21	NA	6009049	5970928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006032_6008996
WTC11_00080537	chr7	-	2708	14	FSM	ENSG00000122512.16	ENST00000441476.6	2730	14	22	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_11	33.7889376526151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	-6006492	True	NA	-2	True	AATACA	-44	NA	6009084	5973241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003971_6004059_6005891_6006032_6008996
WTC11_00080541	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	40.0731474039305	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	-6049749	True	NA	-24	True	AATAAA	-25	NA	6059175	6022246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
WTC11_00080542	chr7	-	905	3	FSM	ENSG00000086232.13	ENST00000490523.1	905	3	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	11	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCTCGTCACTGCC	-6028801	False	NA	76	True	NA	NA	NA	6028839	6024355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6024802_6026727_6026962_6028614
WTC11_00080544	chr7	-	629	5	FSM	ENSG00000086232.13	ENST00000495565.5	629	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	331.059662296692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGAGTTTCACATCCA	-6046877	False	NA	NA	False	NA	NA	NA	6046902	6040958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046776
WTC11_00080545	chr7	-	1004	5	FSM	ENSG00000086232.13	ENST00000463213.5	791	5	-186	-27	-67	27	multi-exon	FALSE	canonical	3	738	junction_4	8.67107259801231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTGATCCACC	NA	False	NA	NA	False	AATAGA	-39	NA	6059242	6046695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
WTC11_00080546	chr7	-	4482	13	FSM	ENSG00000008256.16	ENST00000350796.8	4482	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	9.60432483600776	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTAAGACTTGGTTCT	-6271445	True	NA	NA	False	AATAAA	-21	NA	6272624	6161778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
WTC11_00080547	chr7	-	295	3	FSM	ENSG00000008256.16	ENST00000495176.5	574	3	279	0	279	0	multi-exon	FALSE	canonical	3	77	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTCTTCCTCCTGAAC	NA	False	NA	NA	False	NA	NA	NA	6170680	6165544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6165617_6165733_6165811_6170534
WTC11_00080548	chr7	-	2224	2	FSM	ENSG00000178397.13	ENST00000313324.9	2220	2	0	-4	0	4	multi-exon	FALSE	canonical	3	121	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTGGTTCTTCTTG	-6346699	True	NA	-7	True	AATAAA	-41	NA	6348967	6329406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6331236_6348572
WTC11_00080549	chr7	-	2843	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	-4	0	1	multi-exon	FALSE	canonical	3	107	junction_12	13.0188246749992	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTACAGCTGCGTGC	-6445328	True	NA	-10	True	AATAAA	-20	NA	6447954	6409124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
WTC11_00080551	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_2	49.7543967906355	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	-6473930	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
WTC11_00080552	chr7	-	655	4	FSM	ENSG00000136240.10	ENST00000490996.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	487.136074988863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGGATAGTTCCAAAAG	-6473835	False	NA	-22	True	AATAAA	-17	NA	6484057	6462871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6463176_6469595_6469755_6474183_6474285_6483966
WTC11_00080553	chr7	-	215	1	FSM	ENSG00000231359.3	ENST00000496556.1	306	1	216	-125	216	125	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATCCAGCACACTGGG	NA	False	NA	NA	False	AAAAAG	-30	NA	6490882	6490667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6490700_6490900
WTC11_00080554	chr7	-	5084	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	-9	0	9	multi-exon	FALSE	canonical	3	68	junction_2	6.97764286847643	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTATCCTATGG	-6704804	True	NA	9	True	AGTAAA	-28	NA	6706947	6688423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
WTC11_00080555	chr7	-	1256	6	FSM	ENSG00000164631.19	ENST00000342651.9	2921	6	-45	1710	-21	-1710	multi-exon	FALSE	canonical	1	3	junction_1	28.7847181678056	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATATGGAAATGAAGCC	-6704825	True	NA	NA	False	NA	NA	NA	6706968	6692158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6692488_6692601_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
WTC11_00080556	chr7	-	2872	4	FSM	ENSG00000146574.16	ENST00000467004.5	2867	4	0	-5	0	1	multi-exon	FALSE	canonical	3	514	junction_3	475.717236274753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTGGTGTTGAGTCT	-6807164	False	NA	-1	True	AATAAA	-21	NA	6807178	6798935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937
WTC11_00080557	chr7	-	1815	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	-1	0	1	multi-exon	FALSE	canonical	3	514	junction_3	351.54122033104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTGGTGTTGAGTCT	-6826263	False	NA	-1	True	AATAAA	-21	NA	6826275	6798935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
WTC11_00080564	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_1	214.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	-6826204	False	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6824549_6824639_6824738_6826077
WTC11_00080566	chr7	-	1578	3	FSM	ENSG00000272894.5	ENST00000609497.5	1578	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACCATGCACGATT	-7566724	True	NA	-11	True	ATTAAA	-22	NA	7566996	7552461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7552923_7555155_7555190_7565913
WTC11_00080567	chr7	-	545	4	ISM	ENSG00000106399.11	ENST00000396682.6	847	5	448	-5	53	0	3prime_fragment	FALSE	canonical	3	2199	junction_1	64.0954149859584	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	-7640464	False	NA	-23	True	ATTAAA	-32	NA	7640524	7636926	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319
WTC11_00080569	chr7	-	2502	14	FSM	ENSG00000003147.19	ENST00000402384.8	2344	14	-159	1	-53	-1	multi-exon	FALSE	canonical	3	69	junction_13	83.5996376085688	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGTTTATGGAGTCTG	-8262298	False	NA	46	True	ATTAAA	-24	NA	8262326	8113184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262093
WTC11_00080570	chr7	-	2443	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	-3	0	0	multi-exon	FALSE	canonical	3	283	junction_5	38.7389992019876	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTTTATGGAGTCTGT	NA	False	NA	47	True	ATTAAA	-25	NA	8262612	8113183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
WTC11_00080571	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	107.815972952381	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	-8262178	False	NA	-24	True	NA	NA	NA	8262206	8113254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
WTC11_00080572	chr7	-	1956	15	FSM	ENSG00000003147.19	ENST00000455539.5	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	137.016534083463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262125	False	2544	-6	True	AATAAA	-37	NA	8262153	8113771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8227637_8227852_8228600_8228674_8232589_8232756_8235909_8236006_8262093
WTC11_00080573	chr7	-	1615	8	FSM	ENSG00000003147.19	ENST00000407906.5	1615	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	39.6911546204194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATACGTGCACAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	8262612	8156556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
WTC11_00080577	chr7	-	2032	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	3	0	-3	multi-exon	FALSE	canonical	3	11961	junction_2	636.085424032548	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAACGTTTTCTAGAATT	-10862285	True	NA	NA	False	AATAAA	-20	NA	10940153	10931945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
WTC11_00080578	chr7	-	1690	2	FSM	ENSG00000146530.15	ENST00000485526.1	573	2	-1115	-2	-1115	0	multi-exon	FALSE	canonical	3	67	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	NA	False	NA	-5	True	AATAAA	-23	NA	12334841	12330884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_12331198_12333464
WTC11_00080581	chr7	-	6795	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	-336	0	-55	0	multi-exon	FALSE	non_canonical	3	49	junction_13	47.6307294772245	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	-13989992	False	NA	-1	True	AATAAA	-18	NA	13990002	13891228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
WTC11_00080582	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	3	18	junction_11	50.6832653686575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	-13988863	False	811	-7	True	AATAAA	-24	NA	13988873	13893267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
WTC11_00080584	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	75	junction_12	33.4168744798193	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	-13989937	False	NA	-10	True	TTTAAA	-6	NA	13989947	13894380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
WTC11_00080587	chr7	-	715	1	FSM	ENSG00000272361.2	ENST00000607795.2	599	1	-120	4	-120	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACAGTTTGAATGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	16594344	16593629	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16593600_16594300
WTC11_00080588	chr7	-	2493	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	-4	0	4	multi-exon	FALSE	canonical	3	43	junction_2	10.2306728354819	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTGTTTTATAATTTG	-16644654	True	NA	NA	False	AATAAA	-24	NA	16645754	16599774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
WTC11_00080589	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_13	16.5987951369971	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-17937124	True	NA	-14	True	AATAAA	-14	NA	17940494	17790760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
WTC11_00080590	chr7	-	6346	26	NIC	ENSG00000071189.21	novel	6357	26	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	25.6624238917527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTGTTGAGTTCA	-17937085	True	NA	-19	True	AATAAA	-9	NA	17940455	17790765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821682_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
WTC11_00080591	chr7	-	6817	25	FSM	ENSG00000071189.21	ENST00000611725.4	6817	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	25.9033660940041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGAGCTTCTGTATT	-17937098	True	NA	-17	True	AATAAA	-17	NA	17940468	17792841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821682_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
WTC11_00080593	chr7	-	4008	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	138	0	-138	multi-exon	FALSE	canonical	3	20	junction_1	53.8568472898294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACACTTTAAGGAG	-17937114	True	NA	NA	False	AAAAAG	-20	NA	17940484	17879564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
WTC11_00080594	chr7	-	280	1	FSM	ENSG00000229937.9	ENST00000506618.5	1077	1	92	705	92	-705	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTCCCCAATCTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	18027754	18027474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_18027500_18027800
WTC11_00080595	chr7	-	3929	5	NNC	ENSG00000105849.6	novel	3893	4	NA	NA	0	8133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.157646347714	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACAGAAAGAGTCAAGAC	-19708341	True	NA	NA	False	NA	NA	NA	19709037	19687327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19687364_19695460_19698728_19700071_19700281_19704778_19704921_19708762
WTC11_00080596	chr7	-	3930	5	NNC	ENSG00000105849.6	novel	3893	4	NA	NA	0	8133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.157646347714	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACAGAAAGAGTCAAGAC	-19708341	True	NA	NA	False	NA	NA	NA	19709037	19687327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19687365_19695460_19698728_19700071_19700281_19704778_19704921_19708762
WTC11_00080597	chr7	-	3943	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	-50	0	50	multi-exon	FALSE	canonical	3	181	junction_1	34.5350063944784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTG	-19708341	True	NA	48	True	AATAAA	-3	NA	19709037	19695410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
WTC11_00080598	chr7	-	3426	3	ISM	ENSG00000237921.2	ENST00000418764.2	369	4	-2333	-74	-2333	74	intron_retention	FALSE	canonical	3	56	junction_1	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTTTCCTCGTTTTT	NA	False	NA	-7	True	AATAAA	-26	NA	19820423	19813610	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19813725_19816202_19816315_19817223
WTC11_00080599	chr7	-	1113	6	FSM	ENSG00000243004.7	ENST00000691231.1	799	6	-314	0	-270	0	multi-exon	FALSE	canonical	3	175	junction_1	246.846511014436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20123367	False	NA	-2	True	AATAAA	-14	NA	20123386	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
WTC11_00080600	chr7	-	803	6	NIC	ENSG00000243004.7	novel	955	7	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_4	139.037261192818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20125097	False	NA	-2	True	AATAAA	-14	NA	20125116	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20045502_20045562_20125079
WTC11_00080601	chr7	-	890	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_3	206.772553519293	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121315	True	NA	-2	True	AATAAA	-14	NA	20125162	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00080602	chr7	-	795	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_1	231.043718806636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121315	True	NA	-2	True	AATAAA	-14	NA	20125162	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00080603	chr7	-	778	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_1	252.272075347233	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121315	True	NA	-2	True	AATAAA	-14	NA	20125162	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00080604	chr7	-	980	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_2	184.517087435163	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20125216	False	NA	-2	True	AATAAA	-14	NA	20125235	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00080605	chr7	-	1510	8	NNC	ENSG00000243004.7	novel	955	7	NA	NA	-1206	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	254.703589231379	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20126349	False	NA	-2	True	AATAAA	-14	NA	20126368	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985_20123097_20125793
WTC11_00080606	chr7	-	5794	6	NIC	ENSG00000243004.7	novel	743	6	NA	NA	-260	4743	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	260.486467978665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCAGCAAAAAAAAAAAAAA	-20123357	False	NA	NA	False	NA	NA	NA	20123376	19926327	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
WTC11_00080607	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	246.862714884204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	-20121315	True	NA	NA	False	TATAAA	-12	NA	20125162	19931070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00080609	chr7	-	534	5	NNC	ENSG00000243004.7	novel	587	6	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	38.5324538538619	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCCACCAGGGATT	-20123279	False	NA	-10	True	ATTAAA	-16	NA	20123298	20007104	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20007353_20028918_20028960_20038445_20038528_20045502_20045562_20123194
WTC11_00080610	chr7	-	431	4	NIC	ENSG00000243004.7	novel	587	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	308.716698608935	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCCACCAGGGATT	-20121315	True	NA	-10	True	ATTAAA	-16	NA	20125162	20007104	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_20007353_20028918_20028960_20045502_20045562_20125079
WTC11_00080611	chr7	-	2989	5	FSM	ENSG00000183742.13	ENST00000332878.8	2994	5	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_4	5.1720402163943	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAAAGTGCCCTC	-20215797	True	NA	NA	False	AATACA	-33	NA	20217399	20140624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20217298
WTC11_00080612	chr7	-	523	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	99	302	99	-302	multi-exon	FALSE	canonical	2	3	junction_3	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGATGTGACACTGTG	-20331568	False	NA	-20	True	AATAAA	-13	NA	20331678	20328602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
WTC11_00080613	chr7	-	4843	3	FSM	ENSG00000164651.18	ENST00000361443.4	1714	3	-55	-3074	-55	1066	multi-exon	FALSE	canonical	3	16	junction_2	4	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTGAGGCCTCCAGT	NA	False	NA	NA	False	AATATA	-45	NA	20786941	20781212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20785796_20785947_20786044_20786777
WTC11_00080614	chr7	-	4747	2	FSM	ENSG00000164651.18	ENST00000418710.3	3626	2	-55	-1066	-55	1066	multi-exon	FALSE	canonical	3	34	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTGAGGCCTCCAGT	NA	False	NA	NA	False	AATATA	-45	NA	20786941	20781212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20785796_20786777
WTC11_00080615	chr7	-	2916	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_10	494.491698615861	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21934846	True	NA	-2	True	AATAAA	-26	NA	21945878	21900898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
WTC11_00080616	chr7	-	2877	10	NIC	ENSG00000164649.20	novel	2883	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	543	junction_8	234.722268244571	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21934864	True	NA	-2	True	AATAAA	-26	NA	21945896	21900898	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911752_21916753_21916895_21945780
WTC11_00080617	chr7	-	2885	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	-2	0	2	multi-exon	FALSE	canonical	3	689	junction_8	192.731822892732	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTCAGTGGTATTT	-21934867	True	NA	0	True	AATAAA	-28	NA	21945899	21900896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
WTC11_00080623	chr7	-	1264	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	-3	0	3	multi-exon	FALSE	canonical	3	20	junction_1	10.256095748383	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGCATCTCTTAATTATC	-22499520	True	NA	1	True	ATTAAA	-21	NA	22500188	22419440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
WTC11_00080624	chr7	-	1262	5	FSM	ENSG00000105889.16	ENST00000404369.8	1515	5	257	-4	-36	4	multi-exon	FALSE	canonical	2	8	junction_1	14.8555545167456	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTACAAAGTGGACAT	-22499573	True	NA	NA	False	NA	NA	NA	22500241	22438414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22438756_22492564_22492730_22493323_22493837_22494771_22494887_22500113
WTC11_00080626	chr7	-	1762	1	FSM	ENSG00000233476.3	ENST00000434005.1	1384	1	-64	-314	-64	314	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAACAGACACTT	-22512032	True	NA	NA	False	ATTAAA	-32	NA	22512063	22510301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22510300_22512100
WTC11_00080627	chr7	-	337	1	FSM	ENSG00000234513.1	ENST00000447425.1	348	1	51	-40	51	40	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAATAAAATGGACAT	NA	False	NA	NA	False	NA	NA	NA	22773942	22773605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22773600_22773900
WTC11_00080628	chr7	-	432	4	NNC	ENSG00000196683.12	novel	514	4	NA	NA	0	13338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3246.99830612829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTGGAAGAAATGTT	-22769746	True	NA	NA	False	NA	NA	NA	22822791	22799289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22799343_22812970_22813186_22817999_22818049_22822676
WTC11_00080629	chr7	-	450	4	NNC	ENSG00000196683.12	novel	434	3	NA	NA	0	13338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3246.99830612829	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTGGAAGAAATGTT	-22769765	True	NA	NA	False	NA	NA	NA	22822810	22799289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22799342_22812970_22813186_22817999_22818049_22822676
WTC11_00080630	chr7	-	727	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	4	0	-4	multi-exon	FALSE	canonical	3	237	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTCCTGGCGGCTCTG	-22769804	True	NA	NA	False	ATTAAA	-18	NA	22822849	22812631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22822676
WTC11_00080631	chr7	-	794	3	FSM	ENSG00000196683.12	ENST00000405021.7	455	3	0	-339	0	-4	multi-exon	FALSE	canonical	3	509	junction_2	3258.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTCCTGGCGGCTCTG	-22769299	False	NA	NA	False	ATTAAA	-18	NA	22822344	22812631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817999_22818049_22822153
WTC11_00080632	chr7	-	435	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	-1	0	0	multi-exon	FALSE	canonical	3	6741	junction_2	142.5	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	-22769804	True	NA	-3	True	AATAAA	-16	NA	22822849	22812972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817999_22818049_22822676
WTC11_00080634	chr7	-	13151	11	FSM	ENSG00000122591.13	ENST00000432176.7	13178	11	0	27	0	-27	multi-exon	FALSE	canonical	3	11	junction_1	108.106660294359	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGGAAAAAAAAAAAAAAAAA	-22999347	True	NA	NA	False	NA	NA	NA	23014130	22934237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
WTC11_00080635	chr7	-	6337	11	FSM	ENSG00000122591.13	ENST00000440481.6	6337	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	101.515959336451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-22999347	True	NA	-20	True	AATAAA	-5	NA	23014130	22941268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_23013924
WTC11_00080636	chr7	-	6356	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	70.3113500824243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-23014141	False	NA	-20	True	AATAAA	-5	NA	23014151	22941268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
WTC11_00080637	chr7	-	6289	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	10	-3169	0	0	multi-exon	FALSE	canonical	3	218	junction_1	50.3041985990654	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATGTTCTCCATAT	-22999291	True	NA	-11	True	AATAAA	-33	NA	23014074	22941339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
WTC11_00080641	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	30.4448499567478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	-22999291	True	NA	-1	True	AATAAA	-24	NA	23014074	22978163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
WTC11_00080642	chr7	-	3485	3	FSM	ENSG00000230658.2	ENST00000662806.1	3578	3	41	52	40	-52	multi-exon	FALSE	canonical	2	4	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGCCAATTTGGACGG	-23105562	True	NA	NA	False	GGGGCT	-1	NA	23105662	23100265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23103579_23104249_23104318_23105558
WTC11_00080643	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	11.9991496297335	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23448675	True	NA	-27	True	AATAAA	-22	NA	23470491	23310208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
WTC11_00080644	chr7	-	529	4	FSM	ENSG00000136231.14	ENST00000498363.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	8.73053390247253	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGAAGTAAAGGCTCAGG	-23317802	False	NA	NA	False	NA	NA	NA	23317833	23312372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638
WTC11_00080647	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_7	84.8997007278204	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-23517754	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
WTC11_00080649	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	204.774533023518	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
WTC11_00080650	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	217.685804256961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
WTC11_00080651	chr7	-	2216	10	FSM	ENSG00000164548.12	ENST00000392502.8	2229	10	13	0	-5	0	multi-exon	FALSE	canonical	3	12	junction_7	231.033427114875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517801	True	NA	-8	True	AATAAA	-15	NA	23532028	23504783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505811_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531180_23531271_23531788
WTC11_00080652	chr7	-	1653	5	FSM	ENSG00000164548.12	ENST00000494255.5	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	169.638402197144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCTTTCTCAAAAAAG	-23517754	True	NA	NA	False	NA	NA	NA	23531981	23507156	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
WTC11_00080653	chr7	-	862	5	FSM	ENSG00000164548.12	ENST00000490942.1	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	200.764165129139	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGATCTTCGTGAAGTA	-23517753	True	NA	NA	False	NA	NA	NA	23531980	23513024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23513083_23516362_23516529_23521706_23521841_23522120_23522433_23531788
WTC11_00080655	chr7	-	1423	1	FSM	ENSG00000224785.1	ENST00000444025.1	1803	1	107	273	107	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGCAAAAAAGACAGCCT	NA	False	NA	NA	False	NA	NA	NA	23564154	23562731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23562700_23564200
WTC11_00080656	chr7	-	611	1	FSM	ENSG00000232553.3	ENST00000416636.2	1294	1	462	221	462	-221	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACGCTATGTTCGTGAG	NA	False	NA	NA	False	NA	NA	NA	23585893	23585282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23585300_23585900
WTC11_00080658	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.55050355892044	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-24756833	True	NA	-4	True	ATTAAA	-18	NA	24757464	24698354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
WTC11_00080662	chr7	-	6749	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_12	19.9771046636844	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	-24978422	True	NA	-4	True	AATAAA	-16	NA	24980178	24796539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
WTC11_00080663	chr7	-	6683	22	NIC	ENSG00000070882.13	novel	6749	23	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	14.7744953986833	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	-24978464	True	NA	-4	True	AATAAA	-16	NA	24980220	24796539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
WTC11_00080667	chr7	-	1288	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACGGTGGCTGACG	-25039201	True	NA	NA	False	AAAAAG	-1	NA	25125260	25096727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122825_25123850_25123950_25124128_25125199
WTC11_00080668	chr7	-	1280	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACGGTGGCTGACG	-25039201	True	NA	NA	False	AAAAAG	-1	NA	25125260	25096727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122833_25123850_25123950_25124128_25125199
WTC11_00080669	chr7	-	1284	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACGGTGGCTGACG	-25039201	True	NA	NA	False	AAAAAG	-1	NA	25125260	25096727	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122829_25123850_25123950_25124128_25125199
WTC11_00080670	chr7	-	1284	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCACGGTGGCTGAC	-25039201	True	NA	NA	False	NA	NA	NA	25125260	25096728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122828_25123850_25123950_25124128_25125199
WTC11_00080671	chr7	-	1358	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	-71	21927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCACGGTGGCTGAC	-25039272	True	NA	NA	False	NA	NA	NA	25125331	25096728	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096755_25122826_25123850_25123950_25124128_25125199
WTC11_00080672	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	3103	junction_1	213	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	-25039201	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25123850_25123950_25124128_25125199
WTC11_00080674	chr7	-	442	4	FSM	ENSG00000153790.12	ENST00000444434.1	519	4	0	77	0	-77	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATAATACCGATTTCACT	-25179926	False	NA	NA	False	NA	NA	NA	25180048	25168398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25168466_25179174_25179333_25179661_25179801_25179970
WTC11_00080676	chr7	-	1742	12	NNC	ENSG00000122566.22	novel	3664	12	NA	NA	0	9816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2828.37831642559	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAAGCTAAGAAATTA	-26115624	True	NA	NA	False	AAAAAG	-1	NA	26200746	26161334	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_26161365_26191842_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080677	chr7	-	2978	11	FSM	ENSG00000122566.22	ENST00000676749.1	2978	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	2887.34789036583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATACACTGATTTCCTT	-26201251	False	NA	-12	True	AATAAA	-21	NA	26201301	26184072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26185280_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080678	chr7	-	3868	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	-18	0	18	multi-exon	FALSE	canonical	3	786	junction_1	3556.63194284417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTATGATAATTTG	-26200997	False	NA	56	True	AAAAAG	-11	NA	26201047	26189647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080679	chr7	-	4269	10	FSM	ENSG00000122566.22	ENST00000676932.1	4269	10	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2751.97113195453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080680	chr7	-	4942	9	FSM	ENSG00000122566.22	ENST00000476233.2	4942	9	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2825.76025168449	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080681	chr7	-	4078	11	FSM	ENSG00000122566.22	ENST00000677669.1	4060	11	0	-18	0	18	multi-exon	FALSE	canonical	3	786	junction_1	2749.34740620388	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTATGATAATTTG	-26201251	False	NA	56	True	AAAAAG	-11	NA	26201301	26189647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080682	chr7	-	4086	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	-18	0	18	multi-exon	FALSE	canonical	3	786	junction_1	2677.71443772483	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTATGATAATTTG	-26201251	False	NA	56	True	AAAAAG	-11	NA	26201301	26189647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080683	chr7	-	3792	11	FSM	ENSG00000122566.22	ENST00000677321.1	3792	11	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	3506.90479625552	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080684	chr7	-	3816	12	FSM	ENSG00000122566.22	ENST00000678973.1	3816	12	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_5	3437.50467347541	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193599_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080685	chr7	-	4062	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	-18	0	18	multi-exon	FALSE	canonical	3	786	junction_1	3511.78146861865	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTATGATAATTTG	-26201180	True	NA	56	True	AAAAAG	-11	NA	26201397	26189647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080686	chr7	-	4110	12	FSM	ENSG00000122566.22	ENST00000677574.1	4092	12	0	-18	0	18	multi-exon	FALSE	canonical	3	786	junction_1	2624.78858967648	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTATGATAATTTG	-26201431	False	NA	56	True	AAAAAG	-11	NA	26201481	26189647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080688	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	6061	junction_10	1239.49685356599	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080689	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_11	3045.63814371953	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080692	chr7	-	4121	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	-15	0	0	multi-exon	FALSE	canonical	3	1575	junction_10	3105.30703151878	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26200997	False	NA	-5	True	AATAAA	-23	NA	26201047	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080693	chr7	-	2479	13	FSM	ENSG00000122566.22	ENST00000678697.1	2463	13	0	-16	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3377.0898673595	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201251	False	NA	-5	True	AATAAA	-23	NA	26201301	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080694	chr7	-	2670	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	-14	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3828.05505718417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201251	False	NA	-5	True	AATAAA	-23	NA	26201301	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080696	chr7	-	3744	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2891.45912819116	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201251	False	NA	-5	True	AATAAA	-23	NA	26201301	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080697	chr7	-	4339	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	-6	0	0	multi-exon	FALSE	canonical	3	6061	junction_9	1238.36619765971	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201251	False	NA	-5	True	AATAAA	-23	NA	26201301	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080698	chr7	-	3720	13	FSM	ENSG00000122566.22	ENST00000679001.1	3706	13	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3637.31457717549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201180	True	NA	-5	True	AATAAA	-23	NA	26201397	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080699	chr7	-	3538	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	-16	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3355.02498334795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201431	False	NA	-5	True	AATAAA	-23	NA	26201481	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080700	chr7	-	3768	12	FSM	ENSG00000122566.22	ENST00000678449.1	3754	12	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2828.37831642559	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201431	False	NA	-5	True	AATAAA	-23	NA	26201481	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080701	chr7	-	6718	11	FSM	ENSG00000122566.22	ENST00000490912.6	6718	11	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2660.1543564237	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201479	False	NA	-5	True	AATAAA	-23	NA	26201529	26189926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621
WTC11_00080702	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3517.157746188	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080703	chr7	-	2577	13	FSM	ENSG00000122566.22	ENST00000677396.1	2577	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3933.73385231301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080704	chr7	-	2870	12	FSM	ENSG00000122566.22	ENST00000676497.1	2870	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3568.42942974095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080705	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	3874.65740689849	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	-26115624	True	NA	-1	True	AATAAA	-18	NA	26200746	26190124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
WTC11_00080706	chr7	-	3290	11	FSM	ENSG00000122566.22	ENST00000677656.1	3273	11	0	-17	0	0	multi-exon	FALSE	canonical	3	45	junction_1	2879.12890298437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATACTTGGTGTAAT	-26201251	False	NA	-8	True	AATAAA	-11	NA	26201301	26190131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080707	chr7	-	3622	12	FSM	ENSG00000122566.22	ENST00000679243.1	3622	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	2824.46117438704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATACTTGGTGTAAT	-26201431	False	NA	-8	True	AATAAA	-11	NA	26201481	26190131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190457_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00080708	chr7	-	6284	9	FSM	ENSG00000122566.22	ENST00000463181.5	6284	9	0	0	0	0	multi-exon	FALSE	canonical	3	8347	junction_5	815.494481894268	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTTGAGGTTCTTGA	-26115662	True	NA	NA	False	AATAAA	-27	NA	26200784	26190303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621
WTC11_00080709	chr7	-	3843	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	-4	0	4	multi-exon	TRUE	canonical	3	18	junction_1	3.73794358200097	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATGCTAATAATTCAAC	-26864229	True	NA	-1	True	AATAAA	-22	NA	26864590	26667063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
WTC11_00080710	chr7	-	619	2	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTGCATATTTTATC	-27456960	False	NA	NA	False	NA	NA	NA	27456971	27438245	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_27438271_27456377
WTC11_00080711	chr7	-	621	2	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTGCATATTTTATC	-27456960	False	NA	NA	False	NA	NA	NA	27456971	27438245	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_27438271_27456375
WTC11_00080712	chr7	-	622	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAAGATGGGG	-27456960	False	NA	NA	False	AATAAA	-44	NA	27456971	27456349	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_27456300_27457000
WTC11_00080713	chr7	-	687	1	FSM	ENSG00000233830.2	ENST00000453115.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCGGTTGGGAGGGAAT	-27458838	False	NA	NA	False	NA	NA	NA	27458849	27458162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27458200_27458800
WTC11_00080714	chr7	-	1884	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	-6	0	6	multi-exon	FALSE	canonical	3	229	junction_5	22.8026135272576	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTTGTTTCTTC	-27658118	True	NA	0	True	AATAAA	-22	NA	27662883	27525435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
WTC11_00080715	chr7	-	1669	7	FSM	ENSG00000106049.9	ENST00000428288.2	1669	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_6	98.3440672107655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGAATTCAAATAAATT	-27658103	True	NA	-39	True	TATAAA	-13	NA	27662868	27525474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27662697
WTC11_00080716	chr7	-	2577	6	NNC	ENSG00000106049.9	novel	570	2	NA	NA	-4	-8627	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.226798899348	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCCCTTAGTAACATTT	-27658107	True	NA	-2	True	AATAAA	-20	NA	27662872	27539880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_27541756_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
WTC11_00080717	chr7	-	1753	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	155	1265	-8	963	multi-exon	FALSE	canonical	3	79	junction_3	6.86931583201704	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAATTCTTGCAACCA	-28178880	True	NA	NA	False	TTTAAA	-43	NA	28180640	27831841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
WTC11_00080718	chr7	-	5077	1	FSM	ENSG00000255690.3	ENST00000539664.3	4973	1	-108	4	-108	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGTTGGAGTTTCCA	-28958374	False	NA	NA	False	AATAAA	-14	NA	28958438	28953361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28953400_28958400
WTC11_00080719	chr7	-	2097	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	-10	0	10	multi-exon	FALSE	canonical	3	368	junction_12	62.0785233035996	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATTCTTGATAAGCAGA	-29142988	True	NA	NA	False	AATAAA	-27	NA	29146537	28995224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
WTC11_00080720	chr7	-	2176	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	-437	0	41	multi-exon	FALSE	canonical	3	67	junction_12	137.376813505369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAACAAACTTAATCTTT	-29142948	True	NA	NA	False	TATAAA	-43	NA	29146497	28995193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
WTC11_00080721	chr7	-	1434	3	FSM	ENSG00000223813.4	ENST00000447171.2	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	-29563359	True	NA	NA	False	AATAAA	-16	NA	29563663	29514223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29515318_29561858_29561923_29563387
WTC11_00080722	chr7	-	420	1	FSM	ENSG00000225264.3	ENST00000454624.1	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGACCCCTCTCCACGC	-29685012	False	NA	NA	False	NA	NA	NA	29685192	29684772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29684800_29685200
WTC11_00080723	chr7	-	5281	9	NNC	ENSG00000136193.17	novel	5254	8	NA	NA	0	5025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.022784794401	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCTGTACTGCAAAATG	-29980756	True	NA	NA	False	NA	NA	NA	29989801	29915078	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_29915106_29920108_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
WTC11_00080724	chr7	-	5261	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	-7	0	2	multi-exon	FALSE	canonical	3	399	junction_6	39.3840328155501	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGGCCTCTTCTGTTT	-29980756	True	NA	-3	True	AATAAA	-23	NA	29989801	29920101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
WTC11_00080725	chr7	-	5276	8	FSM	ENSG00000136193.17	ENST00000426154.5	5275	8	0	-1	0	1	multi-exon	FALSE	canonical	2	9	junction_7	159.45212319639	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTGGCCTCTTCTGTT	NA	False	NA	-4	True	AATAAA	-22	NA	29990118	29920102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989942
WTC11_00080726	chr7	-	1552	7	FSM	ENSG00000136193.17	ENST00000425819.6	1552	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	172.173120240453	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTAGCGGTTTCTTT	-29989701	False	NA	NA	False	NA	NA	NA	29989712	29923561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29989641
WTC11_00080727	chr7	-	1001	5	FSM	ENSG00000136193.17	ENST00000421434.5	1001	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	203.820233293949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGTTAGTCTCTCCCT	NA	False	NA	NA	False	AAAACA	-4	NA	29990205	29940683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989942
WTC11_00080728	chr7	-	4980	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	-2	0	2	multi-exon	FALSE	canonical	3	115	junction_2	8.16496580927726	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGAAAAATTCTTC	-30024241	True	NA	-2	True	AATAAA	-20	NA	30026702	30010584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
WTC11_00080731	chr7	-	2835	9	ISM	ENSG00000106100.11	ENST00000222823.9	4503	14	26492	14	-4315	-7	3prime_fragment	FALSE	canonical	3	14	junction_5	3.19912097301743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACACTCTTACGGGTT	NA	False	NA	-14	True	AATAAA	-5	NA	30452292	30424540	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215
WTC11_00080733	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.44862367942584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-30478280	True	NA	NA	False	NA	NA	NA	30478742	30456742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
WTC11_00080734	chr7	-	1052	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	-20	0	18	multi-exon	FALSE	canonical	2	6	junction_1	301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTCATTTCATTATGTT	-30496425	True	NA	13	True	AATAAA	-35	NA	30504841	30496602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30500535_30500682_30504568
WTC11_00080735	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_3	167.476034769821	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
WTC11_00080736	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	288.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30498802_30498939_30504568
WTC11_00080737	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	-30496385	True	NA	15	True	AATAAA	-5	NA	30504801	30496632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30504568
WTC11_00080741	chr7	-	521	4	FSM	ENSG00000196295.13	ENST00000582733.5	521	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.5181016954473	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGGTCACTGAGTGCT	-30594111	True	NA	NA	False	AAAACA	-32	NA	30594795	30568801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30568990_30584710_30584809_30585329_30585480_30594710
WTC11_00080742	chr7	-	1417	4	FSM	ENSG00000196295.13	ENST00000454922.6	1405	4	0	-12	0	-1	multi-exon	FALSE	canonical	2	9	junction_2	4.08248290463863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-30585962	False	NA	-3	True	AATAAA	-39	NA	30585972	30577499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30578092_30579230_30579315_30584710_30584809_30585329
WTC11_00080743	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_1	6.68331255192114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-30594090	True	NA	-3	True	AATAAA	-39	NA	30594774	30577499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
WTC11_00080745	chr7	-	772	6	NNC	ENSG00000106355.10	novel	649	6	NA	NA	0	51051	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	977.504864438024	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAACAAAACAAAAAAAA	-32485211	True	NA	NA	False	AAAACA	-13	NA	32490361	32434286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_32434332_32486805_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
WTC11_00080746	chr7	-	543	6	NNC	ENSG00000106355.10	novel	687	5	NA	NA	0	51051	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	977.504864438024	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAACAAAACAAAAAAAA	-32485211	True	NA	NA	False	AAAACA	-13	NA	32490361	32434286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_32434332_32487034_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
WTC11_00080747	chr7	-	2219	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	-5	0	5	multi-exon	FALSE	canonical	3	2334	junction_4	68.1945745642569	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGCGTTTGATTTA	-32485230	True	NA	0	True	NA	NA	NA	32490380	32485332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
WTC11_00080748	chr7	-	2212	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	-1472	0	5	multi-exon	FALSE	canonical	3	37	junction_4	1055.71406521842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGCGTTTGATTTA	-32494824	True	NA	0	True	NA	NA	NA	32495283	32485332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
WTC11_00080749	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1071.72862703205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485211	True	NA	-6	True	AATAAA	-16	NA	32490361	32487034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
WTC11_00080750	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1143.69586089232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485230	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
WTC11_00080752	chr7	-	3727	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	-119	0	-119	0	multi-exon	FALSE	canonical	3	92	junction_3	6.0184900284226	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-32891850	False	NA	-19	True	AATAAA	-15	NA	32891879	32868171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
WTC11_00080753	chr7	-	3559	4	NIC	ENSG00000170852.12	novel	3608	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	49.2769948578667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTATTTTTCTTTTGTT	-32891124	False	NA	-20	True	AATAAA	-14	NA	32891153	32868172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_32870881_32874991_32875158_32879434_32879943_32890976
WTC11_00080754	chr7	-	575	2	FSM	ENSG00000170852.12	ENST00000477129.1	695	2	0	120	0	-120	multi-exon	FALSE	canonical	3	103	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGGAAACATTGTTAA	NA	False	NA	NA	False	NA	NA	NA	32879493	32874641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32875158_32879434
WTC11_00080755	chr7	-	284	1	ISM	ENSG00000205763.14	ENST00000685019.1	1145	5	25287	166	25287	-166	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACTTGGCCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	32917264	32916980	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_32917000_32917300
WTC11_00080756	chr7	-	2174	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	-316	-116	-316	116	multi-exon	FALSE	canonical	3	63	junction_8	102.625653183588	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAAGTCCTTGTCATA	-33063085	False	NA	62	True	NA	NA	NA	33063112	33014013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
WTC11_00080757	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	29.2123154679666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058969	True	NA	-19	True	AATAAA	-24	NA	33062776	33014129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
WTC11_00080758	chr7	-	1404	2	FSM	ENSG00000122643.23	ENST00000473083.1	369	2	-421	-614	-421	24	multi-exon	FALSE	canonical	3	304	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCAACAAATATTTATT	NA	False	NA	5	True	NA	NA	NA	33016347	33014105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33014832_33015669
WTC11_00080759	chr7	-	840	7	FSM	ENSG00000122643.23	ENST00000409787.4	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	94.5139613437554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	33035983	33017203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933
WTC11_00080760	chr7	-	444	3	FSM	ENSG00000122643.23	ENST00000461851.2	562	3	118	0	118	0	multi-exon	FALSE	canonical	3	307	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTTAAATGATTACCA	NA	False	NA	NA	False	GATAAA	-36	NA	33026915	33021824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33022100_33024038_33024109_33026816
WTC11_00080761	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	28.5965032827442	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-33106874	True	NA	0	True	AATAAA	-23	NA	33109404	33094796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
WTC11_00080762	chr7	-	6660	22	FSM	ENSG00000173852.16	ENST00000638088.2	5030	22	0	-1630	0	41	multi-exon	TRUE	canonical	3	63	junction_21	13.4813215875163	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATTCTGCTTCATAGGC	-35035434	True	NA	-4	True	AATAAA	-14	NA	35037485	34927250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_34931730_34937993_34938120_34939275_34939376_34940152_34940328_34941764_34941885_34942614_34942640_34945666_34945717_34947629_34947702_34949796_34949899_34954697_34954779_34955307_34955368_34957983_34958071_34966893_34966972_34969432_34969533_34973513_34973606_34989883_34989942_35010467_35010562_35011329_35011451_35013567_35013706_35017881_35017970_35018571_35018597_35037096
WTC11_00080763	chr7	-	2905	10	NNC	ENSG00000122557.11	novel	2884	9	NA	NA	1	19962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.2453973088679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACAGTAGCTTTTTTT	-35693942	True	NA	NA	False	NA	NA	NA	35695134	35612696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_35612723_35632662_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183_35694628_35694800
WTC11_00080764	chr7	-	3078	9	NNC	ENSG00000122557.11	novel	3057	8	NA	NA	1	19962	intron_retention	FALSE	non_canonical	0	0	junction_1	26.8488244621622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACAGTAGCTTTTTTT	-35693942	True	NA	NA	False	NA	NA	NA	35695134	35612696	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_35612723_35632662_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
WTC11_00080765	chr7	-	3057	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	8.46601850858803	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	-35693943	True	NA	-5	True	AATAAA	-18	NA	35695135	35632658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
WTC11_00080766	chr7	-	5015	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	8	69	0	-69	multi-exon	FALSE	canonical	3	74	junction_21	10.3321263284534	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCGTGAAGTCCAAGTTG	-37446462	True	NA	NA	False	AGTAAA	-16	NA	37448856	36852974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
WTC11_00080767	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_21	21.803180612178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	NA	False	NA	NA	False	NA	NA	NA	37449223	36855550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
WTC11_00080768	chr7	-	3155	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	0	-10	0	10	multi-exon	FALSE	canonical	2	9	junction_6	8.11789855863636	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTTTTTTTTTTT	-38630800	True	NA	1	True	AATAAA	-40	NA	38631420	38383693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
WTC11_00080769	chr7	-	4932	7	FSM	ENSG00000006715.16	ENST00000482217.1	951	7	-148	-3833	-148	488	multi-exon	FALSE	canonical	3	153	junction_4	15.4137384606504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAGGGATTTATTACAA	-38746113	False	NA	NA	False	NA	NA	NA	38746146	38722485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558
WTC11_00080770	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_15	17.0430128121258	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-38903776	True	NA	NA	False	AATAAA	-13	NA	38909191	38722973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
WTC11_00080772	chr7	-	1650	1	FSM	ENSG00000236015.1	ENST00000438427.1	823	1	-67	-760	-67	760	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTGAGAGATCCATCAA	NA	False	NA	NA	False	AGTAAA	-32	NA	39570265	39568615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_39568600_39570300
WTC11_00080774	chr7	-	945	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	0	61070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGCATGGTGGTGCAT	-40122638	True	NA	NA	False	NA	NA	NA	40134622	40064956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064993_40132744_40133260_40134228
WTC11_00080775	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	-40122638	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_40133260_40134228
WTC11_00080776	chr7	-	8237	15	FSM	ENSG00000106571.15	ENST00000678429.1	8237	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	27.4300594834445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	-42227705	False	NA	-5	True	AATAAA	-19	NA	42227721	41960948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42227650
WTC11_00080777	chr7	-	9508	15	FSM	ENSG00000106571.15	ENST00000395925.8	8405	15	-661	-442	0	442	multi-exon	FALSE	canonical	3	44	junction_14	20.3456107686897	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTCAGTGTGCAAT	-42237453	False	NA	0	True	AATAAA	-16	NA	42237870	41960506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42236970
WTC11_00080779	chr7	-	1767	2	FSM	ENSG00000106571.15	ENST00000428534.2	1765	2	0	-2	0	2	multi-exon	FALSE	canonical	3	85	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGCTTTTGGTTATCTT	-42237453	False	NA	-4	True	AATAAA	-28	NA	42237870	42221615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42223296_42237783
WTC11_00080781	chr7	-	1356	2	FSM	ENSG00000231539.1	ENST00000433315.1	561	2	2	-797	2	797	multi-exon	FALSE	canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGAGTTTTTAAATACCT	NA	False	NA	NA	False	AATAAA	-40	NA	42844436	42828874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42830091_42844296
WTC11_00080782	chr7	-	891	9	NNC	ENSG00000106588.12	novel	1453	9	NA	NA	0	53899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3958.81971046927	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTTGTAATCCTAGTC	-42890159	True	NA	NA	False	AAAAAG	-1	NA	42932154	42862928	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_42862957_42917411_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
WTC11_00080783	chr7	-	3206	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	-745	-638	-530	636	multi-exon	FALSE	canonical	3	58	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTTTCTAGCCACAG	-42912743	False	NA	-18	True	ATTAAA	-2	NA	42912835	42908636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42910922_42911914
WTC11_00080786	chr7	-	1567	7	FSM	ENSG00000106588.12	ENST00000679247.1	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	11232	junction_3	510.460821219415	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCTCAGTATAATAAATA	-42927600	False	NA	27	True	NA	NA	NA	42927616	42916827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382
WTC11_00080787	chr7	-	1474	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	-21	0	0	multi-exon	FALSE	canonical	3	46	junction_8	5187.09591046618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890159	True	NA	-6	True	AATAAA	-24	NA	42932154	42916860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
WTC11_00080789	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_7	556.825623970561	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890179	True	NA	-6	True	AATAAA	-24	NA	42932174	42916860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
WTC11_00080790	chr7	-	5365	7	FSM	ENSG00000106588.12	ENST00000677139.1	5365	7	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_6	600.901729810199	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAAGGAACCCGGGTT	-42890187	True	NA	30	True	NA	NA	NA	42932182	42916959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
WTC11_00080791	chr7	-	684	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	-1	0	1	multi-exon	FALSE	canonical	3	195	junction_5	4718.70369487214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGCCTTTTAGGAGT	-42890190	True	NA	-40	True	AATAAA	-13	NA	42932185	42917411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
WTC11_00080792	chr7	-	1754	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	-17	0	17	multi-exon	FALSE	canonical	2	3	junction_1	435.677250572791	5701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTTAGCAATCTCAAAA	-43714600	True	NA	14	True	AATAAA	-32	NA	43729513	43608438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
WTC11_00080793	chr7	-	1867	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	16	-363	0	0	multi-exon	FALSE	canonical	3	27	junction_1	426.800499843506	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-43714584	True	NA	-3	True	AATAAA	-15	NA	43729497	43608455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
WTC11_00080795	chr7	-	3223	8	FSM	ENSG00000106603.20	ENST00000438444.5	3223	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	535.506931299108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTGTTGAATGAG	NA	False	NA	NA	False	AATAAA	-25	NA	43729717	43631151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43633409_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
WTC11_00080796	chr7	-	2135	3	FSM	ENSG00000106603.20	ENST00000490251.1	2135	3	0	0	0	0	multi-exon	FALSE	canonical	3	1196	junction_2	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACCAGCCTGGCCAAC	-43646405	False	NA	NA	False	NA	NA	NA	43646425	43638798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250
WTC11_00080797	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	552.461059462314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714576	True	NA	-7	True	AATAAA	-17	NA	43729489	43639256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
WTC11_00080798	chr7	-	901	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	-2	0	2	multi-exon	FALSE	canonical	3	1063	junction_5	57.9330648248476	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCATTTCTTTCCTT	-43714610	True	NA	-5	True	AATAAA	-19	NA	43729523	43639254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
WTC11_00080801	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	172.762521655852	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-43861066	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
WTC11_00080802	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_2	33	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-43861066	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43866983_43868962_43869075_43869307
WTC11_00080804	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	30.7408522978788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906253	True	NA	NA	False	AATAAA	-16	NA	43906615	43875912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
WTC11_00080805	chr7	-	3735	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	-164	0	-133	0	multi-exon	FALSE	canonical	3	50	junction_5	16.8095211115606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906501	True	NA	NA	False	AATAAA	-16	NA	43906760	43875912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
WTC11_00080810	chr7	-	2156	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	36	70950	36	-45505	5prime_fragment	FALSE	canonical	3	79	junction_1	219.715472575076	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	-44018660	True	NA	NA	False	NA	NA	NA	44019113	44011844	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
WTC11_00080811	chr7	-	1972	3	ISM	ENSG00000214783.9	ENST00000422304.1	974	9	62	45511	36	-45511	5prime_fragment	FALSE	canonical	3	76	junction_1	241	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	-44018660	True	NA	NA	False	NA	NA	NA	44019113	44011850	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_44013680_44016433_44016524_44019060
WTC11_00080812	chr7	-	1422	3	FSM	ENSG00000272655.2	ENST00000326391.6	1422	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-44018717	True	NA	NA	False	ATTAAA	-18	NA	44019170	44013561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44014784_44016433_44016524_44019060
WTC11_00080814	chr7	-	2807	11	FSM	ENSG00000122678.17	ENST00000242248.10	2806	11	15	-16	-1	16	multi-exon	FALSE	canonical	3	30	junction_4	14.2042247236518	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTAATGCCTTTGACG	-44081287	True	NA	14	True	AATAGA	-38	NA	44082515	44072045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00080815	chr7	-	2559	11	FSM	ENSG00000122678.17	ENST00000430942.5	2561	11	2	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_6	20.7566856699233	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGTAAAGTTGA	-44081284	True	NA	NA	False	ATTAAA	-11	NA	44082512	44072261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074221_44074397_44074531_44076508_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00080816	chr7	-	580	3	FSM	ENSG00000122678.17	ENST00000467607.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGCTGCCCCCTGACCC	-44072890	False	NA	NA	False	NA	NA	NA	44074118	44073217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44073378_44073624_44073709_44073782
WTC11_00080817	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.0272558436134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	-44081250	True	NA	NA	False	NA	NA	NA	44082478	44075718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00080818	chr7	-	1149	5	FSM	ENSG00000122678.17	ENST00000492312.5	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	12.4599357943771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTACAGGCATGTGCCA	-44081256	True	NA	NA	False	NA	NA	NA	44082484	44078350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00080819	chr7	-	536	2	FSM	ENSG00000106628.12	ENST00000489883.1	528	2	0	-8	0	0	multi-exon	FALSE	canonical	3	1763	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44115552	False	NA	1	True	AATAAA	-30	NA	44115564	44114679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294
WTC11_00080820	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_10	251.695629679977	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44106380	True	NA	1	True	AATAAA	-30	NA	44123548	44114679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
WTC11_00080822	chr7	-	1701	10	FSM	ENSG00000106628.12	ENST00000223361.7	1597	10	-85	-19	-85	0	multi-exon	FALSE	canonical	3	41	junction_2	534.150831798577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44122269	False	NA	1	True	AATAAA	-30	NA	44122281	44114679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115355_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833
WTC11_00080823	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	500.176968682086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	-44106362	True	NA	-33	True	GGGGCT	-11	NA	44123530	44114784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
WTC11_00080831	chr7	-	1643	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	-2	0	2	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCACTGTTCTTTGA	-44145884	True	NA	0	True	ATTAAA	-23	NA	44146129	44144270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44145281_44145496
WTC11_00080832	chr7	-	1310	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	3	-2	3	0	multi-exon	FALSE	canonical	3	59	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	-44145896	True	NA	-2	True	ATTAAA	-21	NA	44146141	44144272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44145281_44145496_44145731_44146073
WTC11_00080833	chr7	-	8034	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	2	0	-2	multi-exon	TRUE	canonical	3	277	junction_2	14.4416065588286	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTGAGTTGCTTTT	-44487835	True	NA	-10	True	TATAAA	-5	NA	44490658	44379120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
WTC11_00080835	chr7	-	613	4	FSM	ENSG00000015676.18	ENST00000493613.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	132.056385263602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAAGGGTGAACCAGGC	NA	False	NA	NA	False	NA	NA	NA	44425950	44385892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44425899
WTC11_00080836	chr7	-	811	5	FSM	ENSG00000015676.18	ENST00000464812.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	152.651564027363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGGAAGCTCACCCACA	-44487783	True	NA	NA	False	NA	NA	NA	44490606	44404512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44404584_44427570_44427704_44484967_44485285_44485530_44485623_44490408
WTC11_00080838	chr7	-	1855	14	FSM	ENSG00000136271.11	ENST00000258772.10	1855	14	0	0	0	0	multi-exon	TRUE	canonical	3	428	junction_9	50.9442205698297	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44573855	False	11171	-20	True	AATAAA	-17	NA	44573908	44565803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835
WTC11_00080839	chr7	-	3029	14	FSM	ENSG00000136271.11	ENST00000421223.5	3028	14	0	-1	0	0	multi-exon	FALSE	canonical	3	21	junction_6	136.40090579095	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44574998	False	NA	-20	True	AATAAA	-17	NA	44575051	44565803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44569983_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835
WTC11_00080847	chr7	-	2203	4	FSM	ENSG00000158604.15	ENST00000289577.9	2203	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	184.287818371156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44582234	False	NA	NA	False	ATTAAA	-23	NA	44582287	44577893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44579629_44581448_44581575_44581722_44581824_44582046
WTC11_00080848	chr7	-	1755	4	FSM	ENSG00000158604.15	ENST00000481238.1	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	68.7168101704379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	-44571060	True	NA	-8	True	AATAAA	-27	NA	44582231	44579896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44581240_44581448_44581575_44581722_44581824_44582046
WTC11_00080849	chr7	-	1957	3	FSM	ENSG00000158604.15	ENST00000477639.5	1950	3	0	-7	0	0	multi-exon	FALSE	canonical	3	337	junction_1	84	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	-44571039	True	NA	-8	True	AATAAA	-27	NA	44582210	44579896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44581240_44581448_44581575_44581722
WTC11_00080850	chr7	-	3808	5	FSM	ENSG00000105968.19	ENST00000222690.10	3804	5	0	-4	0	4	multi-exon	FALSE	canonical	3	93	junction_1	1203.63291227018	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACTAAATATTTCTGG	-44828451	True	NA	NA	False	ATTAAA	-22	NA	44848077	44826786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44830164_44835528_44835659_44840898_44841013_44843276_44843355_44847968
WTC11_00080852	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_4	258.780191475314	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-44828461	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
WTC11_00080853	chr7	-	1316	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	-720	0	720	multi-exon	FALSE	canonical	3	184	junction_2	1281.088686322	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-44828395	True	NA	NA	False	NA	NA	NA	44848021	44833507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
WTC11_00080854	chr7	-	1407	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	-720	0	720	multi-exon	FALSE	canonical	3	185	junction_3	1390.98941604728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-44828450	True	NA	NA	False	NA	NA	NA	44848076	44833507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
WTC11_00080855	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	1126.25761805291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-44828454	True	NA	-19	True	GATAAA	-9	NA	44848080	44834238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
WTC11_00080859	chr7	-	3113	2	FSM	ENSG00000232956.10	ENST00000577700.5	3116	2	0	3	0	-1	multi-exon	FALSE	canonical	3	495	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980725	True	NA	-6	True	AATAAA	-17	NA	44986637	44983025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821
WTC11_00080860	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	39	junction_2	219.077358229665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980744	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
WTC11_00080862	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	34	junction_3	194.497268618354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980757	True	NA	-6	True	AATAAA	-17	NA	44986669	44983025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
WTC11_00080863	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	69.4422221866655	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-44980787	True	NA	-3	True	AATAAA	-20	NA	44986699	44983022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
WTC11_00080864	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	342	junction_3	67.2806621548867	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44986834	44983022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
WTC11_00080865	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	342	junction_1	85	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	-44980762	True	NA	-8	True	AATAAA	-15	NA	44986674	44983027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44984427_44986020_44986098_44986524
WTC11_00080866	chr7	-	3239	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	-11	0	-3	multi-exon	FALSE	canonical	3	512	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	-44980781	True	NA	-8	True	AATAAA	-15	NA	44986693	44983027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44986098_44986524
WTC11_00080870	chr7	-	2345	4	FSM	ENSG00000232956.10	ENST00000653305.1	2344	4	0	-1	0	0	multi-exon	FALSE	canonical	3	422	junction_2	39.0412886854702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	-44980753	True	NA	-65	True	NA	NA	NA	44986665	44983084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44984356_44986098_44986524
WTC11_00080873	chr7	-	4836	8	FSM	ENSG00000136274.9	ENST00000490531.3	4836	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	3.80654645556407	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTCTGGTGTCTCCTC	-45088634	True	NA	-6	True	AATAAA	-15	NA	45088969	45080436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45080524_45080639_45080763_45080875_45081023_45081116_45081264_45081600_45081673_45081754_45081868_45082107_45086113_45088827
WTC11_00080875	chr7	-	2191	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_10	240.357150923371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098353	True	NA	-3	True	NA	NA	NA	45111706	45100099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
WTC11_00080876	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	258.020832492262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098365	True	NA	-3	True	NA	NA	NA	45111718	45100099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
WTC11_00080888	chr7	-	1126	9	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	52	8182	0	0	5prime_fragment	FALSE	canonical	3	123	junction_4	16.3458710382775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATATTTTTTTCT	-45766744	True	NA	NA	False	AATAAA	-15	NA	45768985	45736786	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00080891	chr7	-	2506	5	FSM	ENSG00000146674.16	ENST00000613132.5	2613	5	0	107	0	-107	multi-exon	FALSE	canonical	3	15	junction_3	1.11803398874989	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCCCTTTGTTATTG	-45921055	True	NA	NA	False	AATAAA	-20	NA	45921272	45912351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45913835_45914804_45914946_45916547_45916668_45917212_45917440_45920737
WTC11_00080893	chr7	-	7858	31	FSM	ENSG00000136205.17	ENST00000311160.14	7585	31	-271	-2	176	2	multi-exon	FALSE	canonical	3	42	junction_15	12.1493026777489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTGAGACGGTATTTGT	-47582323	False	59	-7	True	AATAAA	-19	NA	47582382	47275151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582050
WTC11_00080896	chr7	-	1304	9	FSM	ENSG00000136273.13	ENST00000458191.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	40.0731752547761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCATTGACCTCCTTGG	-47976352	True	NA	NA	False	NA	NA	NA	47979553	47964319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
WTC11_00080897	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.8969884286244	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	-47976352	True	NA	25	True	GATAAA	-15	NA	47979553	47965165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
WTC11_00080898	chr7	-	497	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	51	0	-51	multi-exon	FALSE	canonical	3	89	junction_2	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTAAATTTAAAGATCT	-47976352	True	NA	-6	True	AATAAA	-22	NA	47979553	47978310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47978594_47978688_47978817_47979467
WTC11_00080900	chr7	-	3570	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	3	-205	1	204	multi-exon	FALSE	canonical	3	11	junction_2	7	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTAATGTTTTCTCTT	-50449547	True	NA	NA	False	AATGAA	-38	NA	50450387	50443923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50450300
WTC11_00080901	chr7	-	3546	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	-58	-3	-18	-1	multi-exon	FALSE	canonical	3	9	junction_2	6.59966329107444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTGCATTCTAAATT	NA	False	NA	-3	True	ATTAAA	-22	NA	50450408	50444129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
WTC11_00080903	chr7	-	3493	7	NNC	ENSG00000106070.20	novel	5431	18	NA	NA	0	36578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.922378514933	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAAGAAAAG	-50606393	False	NA	NA	False	NA	NA	NA	50606413	50553484	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50553505_50590068_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336
WTC11_00080906	chr7	-	5471	19	FSM	ENSG00000106070.20	ENST00000401949.6	5468	19	0	-3	0	-2	multi-exon	FALSE	canonical	2	7	junction_18	189.68115709797	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-50781597	True	NA	-13	True	AATAAA	-24	NA	50782896	50590064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50780626_50780737_50782423
WTC11_00080907	chr7	-	5190	17	NNC	ENSG00000106070.20	novel	5431	18	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	151.899175030676	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTGCTGGTGATA	-50792846	False	NA	-17	True	AATAAA	-20	NA	50792863	50590068	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50792460
WTC11_00080908	chr7	-	5032	17	FSM	ENSG00000106070.20	ENST00000335866.7	5032	17	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_16	131.475030305188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-50784030	True	NA	-11	True	AATAAA	-26	NA	50793462	50590062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50793223
WTC11_00080910	chr7	-	5127	18	NIC	ENSG00000106070.20	novel	5032	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	151.231713413121	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-50784030	True	NA	-13	True	AATAAA	-24	NA	50793462	50590064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50793223
WTC11_00080911	chr7	-	5102	18	NIC	ENSG00000106070.20	novel	5431	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	166.16663167125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTTCATTTTCTATT	-50784000	True	NA	-27	True	AATAAA	-10	NA	50793432	50590078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50755886_50756057_50793223
WTC11_00080912	chr7	-	4846	16	FSM	ENSG00000106070.20	ENST00000402497.6	2319	16	-26	-2501	0	0	multi-exon	FALSE	canonical	3	157	junction_15	101.76172605105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTTCATTTTCTATT	-50784030	True	NA	-27	True	AATAAA	-10	NA	50793462	50590078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50793223
WTC11_00080913	chr7	-	2692	17	FSM	ENSG00000106070.20	ENST00000406641.5	2700	17	8	0	8	0	multi-exon	FALSE	canonical	1	2	junction_16	164.069142722664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACTTGAAAAGCTTTCT	NA	False	NA	-60	True	NA	NA	NA	50756056	50592347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50705139_50705324_50755886
WTC11_00080914	chr7	-	2730	17	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	171.27945686436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATACTTGAAAAGCTTTC	-50784005	True	NA	-61	True	NA	NA	NA	50793437	50592348	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50732271_50732369_50755886_50756057_50793223
WTC11_00080916	chr7	-	2317	16	NNC	ENSG00000106070.20	novel	2319	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	154.634105767992	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50784005	True	NA	-17	True	ATTAAA	-14	NA	50793437	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604375_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50793223
WTC11_00080923	chr7	-	356	3	FSM	ENSG00000106070.20	ENST00000492265.1	447	3	0	91	0	-91	multi-exon	FALSE	canonical	1	1	junction_1	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGTTACAATTTGAAAT	-50778271	False	NA	NA	False	NA	NA	NA	50779570	50761748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50762015_50779134_50779163_50779508
WTC11_00080924	chr7	-	5686	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-207	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	11.8346597584228	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTGTGTGAATTTCA	-51317010	False	NA	-3	True	AATAAA	-15	NA	51317025	51016213	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
WTC11_00080925	chr7	-	5304	13	FSM	ENSG00000106078.19	ENST00000265136.12	5301	13	0	-3	0	3	multi-exon	FALSE	canonical	3	9	junction_6	15.2251619221457	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	-51314228	True	NA	2	True	AATAAA	-20	NA	51316809	51016208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
WTC11_00080926	chr7	-	5398	14	FSM	ENSG00000106078.19	ENST00000395542.6	5339	14	-58	-1	-58	0	multi-exon	FALSE	canonical	3	22	junction_2	9.78103466169374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTGTGAATTTCATA	-51314295	True	NA	-1	True	AATAAA	-17	NA	51316876	51016211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025232_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
WTC11_00080927	chr7	-	339	1	FSM	ENSG00000227080.2	ENST00000446669.1	685	1	213	133	213	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGGCTCTCGGCGGTCT	NA	False	NA	NA	False	NA	NA	NA	51388901	51388562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51388600_51388900
WTC11_00080928	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	3127	junction_3	868.454949896654	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-54739472	True	NA	30	True	ATTAAA	-17	NA	54759211	54752252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
WTC11_00080929	chr7	-	467	4	FSM	ENSG00000132432.14	ENST00000395535.7	459	4	0	-8	0	8	multi-exon	FALSE	canonical	3	302	junction_3	2198.81094129431	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTGTCATAGATACTT	-54739507	True	NA	41	True	ATTAAA	-28	NA	54759246	54752241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759161
WTC11_00080930	chr7	-	516	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	-4	0	0	multi-exon	FALSE	canonical	3	157	junction_3	2267.13784318466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-54739443	True	NA	30	True	ATTAAA	-17	NA	54759182	54752252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
WTC11_00080945	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	1.69967317119759	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561003	True	NA	-1	True	ATTAAA	-20	NA	64563071	64519877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
WTC11_00080946	chr7	-	2805	2	NIC	ENSG00000173041.12	novel	2993	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561038	True	NA	-1	True	ATTAAA	-20	NA	64563106	64519877	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_64522501_64562924
WTC11_00080950	chr7	-	9084	4	FSM	ENSG00000152926.16	ENST00000282869.11	9084	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	7.78888096369861	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGGGCTTTCAATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	64991036	64971771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64979537_64981386_64981483_64981983_64982117_64989946
WTC11_00080951	chr7	-	1677	3	FSM	ENSG00000152926.16	ENST00000487644.1	1837	3	0	160	0	-160	multi-exon	FALSE	canonical	3	12	junction_2	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGTCTGTAGTACAGT	-65003999	True	NA	NA	False	NA	NA	NA	65006684	64980082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64981483_64981983_64982117_65006540
WTC11_00080952	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	-65004002	True	NA	-3	True	AATAAA	-19	NA	65006687	64990355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64993415_65006540
WTC11_00080953	chr7	-	1685	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	44	0	-12	0	multi-exon	FALSE	canonical	3	8	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	-65004014	True	NA	NA	False	AATAAA	-34	NA	65006699	65003668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65005195_65006540
WTC11_00080954	chr7	-	248	1	FSM	ENSG00000272693.5	ENST00000647241.1	248	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTATGTGCACCCCC	-65770471	True	NA	NA	False	NA	NA	NA	65770720	65770472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65770500_65770700
WTC11_00080955	chr7	-	2567	4	FSM	ENSG00000169919.17	ENST00000466883.5	2555	4	0	-12	0	8	multi-exon	FALSE	canonical	3	35	junction_3	141.235815413639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTCTGTGCGTCGTG	-65971838	False	33	1	True	AATAAA	-37	NA	65976160	65960675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294
WTC11_00080956	chr7	-	1999	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	121.046478676581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATCTGAAATCATTTC	-65977766	False	NA	-10	True	AATAAA	-26	NA	65982088	65960686	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979385_65979542_65979726_65979912_65980223_65980410_65981973
WTC11_00080958	chr7	-	2207	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	-8	0	8	multi-exon	FALSE	canonical	3	72	junction_6	81.824444204782	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTCTGTGCGTCGTG	-65977891	True	NA	1	True	AATAAA	-37	NA	65982213	65960675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
WTC11_00080960	chr7	-	1063	3	NNC	ENSG00000169919.17	novel	2555	4	NA	NA	1149	3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTGAAAAGCATCTGAA	-65966748	False	NA	-18	True	AATAAA	-41	NA	65966759	65960694	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_65961064_65964322_65964459_65966201
WTC11_00080969	chr7	-	2467	1	FSM	ENSG00000179406.9	ENST00000654214.1	614	1	54	-1907	20	978	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACATAAACCCTGTG	-66492856	True	NA	NA	False	NA	NA	NA	66493497	66491030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66491000_66493500
WTC11_00080970	chr7	-	1806	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	24	7892	-10	170	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGCTTTTTTTTG	-66590226	True	NA	NA	False	ATTAAA	-35	NA	66592373	66553314	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66573384_66573551_66592256
WTC11_00080971	chr7	-	2079	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-8	22791	-8	170	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGCTTTTTTTTG	-66590224	True	NA	NA	False	ATTAAA	-35	NA	66592371	66553314	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
WTC11_00080974	chr7	-	631	3	FSM	ENSG00000229180.8	ENST00000639153.2	635	3	7	-3	7	3	multi-exon	FALSE	canonical	3	20	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCAATGTGTGTG	-66590232	True	NA	64	True	AATATA	-20	NA	66592379	66584027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66584467_66588511_66588581_66592256
WTC11_00080976	chr7	-	706	1	FSM	ENSG00000272831.1	ENST00000607978.1	557	1	-192	43	-192	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGTTAAAAACAGTAAA	-66739353	True	NA	39	True	NA	NA	NA	66740577	66739871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66739900_66740600
WTC11_00080977	chr7	-	1625	6	NNC	ENSG00000126524.11	novel	1613	5	NA	NA	0	55887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.992203132241	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGGCCTCCTGGTTG	-66991219	True	NA	NA	False	NA	NA	NA	66995586	66931792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66931823_66987697_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
WTC11_00080978	chr7	-	1728	6	NNC	ENSG00000126524.11	novel	1613	5	NA	NA	-103	3762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.992203132241	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGGCTAGGAGAAAATA	-66995629	False	60	NA	False	NA	NA	NA	66995689	66983917	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66983946_66987695_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
WTC11_00080981	chr7	-	1756	4	FSM	ENSG00000183166.11	ENST00000446128.1	550	4	-681	-525	-681	525	multi-exon	FALSE	canonical	3	19	junction_3	27.8248490062789	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTATATTAGTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	72338432	72023131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72023770_72106150_72106295_72278685_72278811_72337583
WTC11_00080983	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	236.915069170367	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	-72953835	True	NA	NA	False	AATAAA	-25	NA	72954706	72947580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
WTC11_00080984	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	201.64875953554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	-72953842	True	NA	-1	True	AATAAA	-23	NA	72954713	72948292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
WTC11_00080985	chr7	-	1652	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	-5	0	0	multi-exon	FALSE	canonical	3	18	junction_3	186.270264857942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	-72953849	True	NA	-1	True	AATAAA	-23	NA	72954720	72948292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
WTC11_00080986	chr7	-	1781	11	FSM	ENSG00000106133.18	ENST00000388955.8	1789	11	13	-5	13	0	multi-exon	FALSE	canonical	3	47	junction_9	181.429903819629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	72954777	72948292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
WTC11_00080991	chr7	-	2362	5	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	3067	-138	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_2	177.771447369931	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTAACATCTACATTTC	-72950768	False	NA	NA	False	NA	NA	NA	72951639	72948622	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057
WTC11_00080996	chr7	-	1067	8	FSM	ENSG00000174353.17	ENST00000608210.5	1067	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	17.0353773551587	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTCAGCCTCCCGA	-72998820	False	NA	NA	False	NA	NA	NA	73003730	72998026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644
WTC11_00080999	chr7	-	306	1	NIC	ENSG00000214544.7	novel	2749	14	NA	NA	2	-36541	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAATGGTCATTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	73280117	73279811	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_73279800_73280100
WTC11_00081000	chr7	-	2430	10	FSM	ENSG00000130305.17	ENST00000438747.7	2336	10	22	-116	0	116	multi-exon	FALSE	canonical	3	461	junction_8	60.5275164442882	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGCAGAGGGCCCTG	-73304383	True	NA	NA	False	NA	NA	NA	73308804	73302399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
WTC11_00081001	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	185.172174948074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-73304395	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
WTC11_00081002	chr7	-	1461	9	ISM	ENSG00000130305.17	ENST00000310326.8	1602	10	291	-6	28	1	3prime_fragment	FALSE	canonical	3	67	junction_1	173.921632855145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-73304104	False	NA	-11	True	AATAAA	-18	NA	73308525	73303228	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430
WTC11_00081003	chr7	-	2939	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	-48	-1219	-28	505	multi-exon	FALSE	canonical	3	461	junction_7	63.2351761284809	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGCTTGAAACATACAA	-73304433	True	NA	NA	False	AATACA	-27	NA	73308854	73302010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
WTC11_00081004	chr7	-	2864	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	-38	-1224	-28	505	multi-exon	FALSE	canonical	3	67	junction_1	166.376413926707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGCTTGAAACATACAA	-73304433	True	NA	NA	False	AATACA	-27	NA	73308854	73302010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
WTC11_00081007	chr7	-	6134	20	FSM	ENSG00000009954.11	ENST00000339594.9	6115	20	-15	-4	-15	4	multi-exon	FALSE	canonical	2	17	junction_5	5.36429149736459	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGCTGTTTGTGCTC	-73522292	False	NA	-5	True	AATAAA	-35	NA	73522308	73440401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73441694_73442180_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
WTC11_00081008	chr7	-	5428	19	FSM	ENSG00000009954.11	ENST00000404251.1	5428	19	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	5.50981167476331	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACAGCTCCTCCCACC	-73517425	True	NA	NA	False	AGTAAA	-39	NA	73522278	73441564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
WTC11_00081009	chr7	-	1802	3	FSM	ENSG00000106635.8	ENST00000493671.5	1802	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	NA	False	NA	-10	True	ATTAAA	-15	NA	73540568	73536355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881
WTC11_00081011	chr7	-	1635	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	3	0	3	0	multi-exon	FALSE	canonical	3	28	junction_5	114.688098772279	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	-73557130	False	NA	-42	True	NA	NA	NA	73557248	73536387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
WTC11_00081012	chr7	-	887	5	FSM	ENSG00000106635.8	ENST00000454871.5	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	125.188607708529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGCACCTTCTAGA	-73557491	False	NA	NA	False	NA	NA	NA	73557609	73536953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557486
WTC11_00081014	chr7	-	1021	7	FSM	ENSG00000106635.8	ENST00000455335.2	985	7	5	-41	0	0	multi-exon	FALSE	canonical	3	15	junction_6	137.154110401402	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAGAGGAGCGCTCATG	-73554856	True	NA	NA	False	GGGGCT	-45	NA	73557671	73537100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73553547_73553670_73557486
WTC11_00081018	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	17.7263144004111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	-73576212	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
WTC11_00081020	chr7	-	762	4	FSM	ENSG00000106638.18	ENST00000465279.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	81.6591833306103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACACCTTCACAGCCACC	-73575980	False	NA	NA	False	NA	NA	NA	73578347	73573400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73573472_73573937_73574123_73574382_73574514_73577972
WTC11_00081024	chr7	-	2205	10	NIC	ENSG00000106089.12	novel	2102	10	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	6.71831842570265	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTGTAGATTTCTTC	-73719073	True	NA	0	True	AATAAA	-20	NA	73719676	73699204	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_73700485_73700729_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
WTC11_00081026	chr7	-	783	9	FSM	ENSG00000106089.12	ENST00000395155.3	783	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	7.1239034243875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATCGAGTACAATGTGG	-73719028	False	NA	NA	False	NA	NA	NA	73719631	73700826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
WTC11_00081030	chr7	-	1421	6	FSM	ENSG00000106077.19	ENST00000222800.8	1418	6	0	-3	0	3	multi-exon	FALSE	canonical	3	117	junction_3	21.5276566304835	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGAGGTCTGTGTCA	-73735752	True	NA	-4	True	AATAAA	-19	NA	73738802	73736090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738464_73738645
WTC11_00081031	chr7	-	1357	5	FSM	ENSG00000106077.19	ENST00000412965.5	852	5	-63	-442	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.128450822837	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735752	True	NA	-7	True	AATAAA	-16	NA	73738802	73736093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73736692_73736928_73737221_73737561_73737736_73738327_73738464_73738645
WTC11_00081037	chr7	-	1279	1	FSM	ENSG00000165215.6	ENST00000395145.3	1274	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCCTTGTTCCCAG	-73768382	True	NA	-3	True	AATAAA	-22	NA	73770270	73768991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73769000_73770300
WTC11_00081038	chr7	-	1486	12	NNC	ENSG00000049541.11	novel	1685	11	NA	NA	0	33171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.782123968555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACCAAAAAAACAAAA	-74243049	True	NA	NA	False	AGTAAA	-40	NA	74254337	74198327	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74198356_74231666_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00081039	chr7	-	1523	12	NNC	ENSG00000049541.11	novel	1685	11	NA	NA	0	30315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.782123968555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAGTGAATAAGACCT	-74243079	True	NA	NA	False	AAAAAG	-3	NA	74254367	74201183	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74201216_74231663_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00081040	chr7	-	1575	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	1	0	-1	multi-exon	FALSE	canonical	3	148	junction_6	335.630418433398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACCATGTGAAGCCTC	-74243101	True	NA	-23	True	AATAAA	-25	NA	74254389	74231499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00081041	chr7	-	1687	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	-2	0	-1	multi-exon	FALSE	canonical	3	1016	junction_5	112.176869273483	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACCATGTGAAGCCTC	-74243111	True	NA	-23	True	AATAAA	-25	NA	74254399	74231499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00081042	chr7	-	1625	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	14	-4	14	-1	multi-exon	FALSE	canonical	3	53	junction_7	362.554142401986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACCATGTGAAGCCTC	-74243156	True	NA	-23	True	AATAAA	-25	NA	74254444	74231499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
WTC11_00081051	chr7	-	735	3	FSM	ENSG00000196275.16	ENST00000614386.1	578	3	-157	0	-81	0	multi-exon	FALSE	canonical	3	166	junction_2	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTCATTTTATTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	74851686	74832632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74832944_74836279_74836384_74851366
WTC11_00081054	chr7	-	4256	1	Genic_Genomic	ENSG00000184616.10	novel	NA	NA	NA	NA	7303	769	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCGCGGTGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	74907775	74903519	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_74903500_74907800
WTC11_00081055	chr7	-	2324	12	NNC	ENSG00000274523.5	novel	2309	11	NA	NA	0	30399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.87567014125	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCACCAGGCATGC	-75069484	True	NA	NA	False	NA	NA	NA	75073790	74996722	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74996748_75042180_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
WTC11_00081056	chr7	-	2324	12	NNC	ENSG00000274523.5	novel	2309	11	NA	NA	0	6066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.87567014125	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACTTTGGGATTCCTT	-75069484	True	NA	NA	False	NA	NA	NA	75073790	75036116	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75036136_75042174_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
WTC11_00081057	chr7	-	2319	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	-10	0	10	multi-exon	FALSE	canonical	3	323	junction_2	14.2481577756565	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTCTTAAATCTTACTT	-75069496	True	NA	-16	True	AATAAA	-38	NA	75073802	75042172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
WTC11_00081059	chr7	-	2992	4	FSM	ENSG00000277053.4	ENST00000618412.4	2990	4	0	-2	0	2	multi-exon	FALSE	canonical	3	1640	junction_3	97.6057830709271	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	NA	False	NA	NA	False	AATAAA	-27	NA	75191533	75185382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75187296_75188074_75188117_75189214_75189257_75190538
WTC11_00081060	chr7	-	3201	23	ISM	ENSG00000277053.4	ENST00000622829.4	3605	24	20432	0	0	0	3prime_fragment	FALSE	canonical	3	438	junction_7	446.177495441015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	75217264	75185395	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_75186528_75187219_75187296_75188074_75188117_75189214_75189257_75190538_75190568_75192046_75192231_75192898_75192981_75193902_75193984_75194656_75194713_75196612_75196797_75196973_75197040_75197947_75198050_75199650_75199726_75200120_75200180_75201120_75201305_75202541_75202614_75207955_75208015_75209375_75209560_75210527_75210600_75212078_75212138_75213405_75213590_75215755_75215822_75217153
WTC11_00081061	chr7	-	3605	24	FSM	ENSG00000277053.4	ENST00000622829.4	3605	24	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_7	459.942903500153	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	75237696	75185395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75186528_75187219_75187296_75188074_75188117_75189214_75189257_75190538_75190568_75192046_75192231_75192898_75192981_75193902_75193984_75194656_75194713_75196612_75196797_75196973_75197040_75197947_75198050_75199650_75199726_75200120_75200180_75201120_75201305_75202541_75202614_75207955_75208015_75209375_75209560_75210527_75210600_75212078_75212138_75213405_75213590_75215755_75215822_75217153_75217265_75237292
WTC11_00081064	chr7	-	653	4	FSM	ENSG00000277053.4	ENST00000615592.1	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	6.84754619472471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGCTGGAGAAGATACTC	NA	False	NA	NA	False	NA	NA	NA	75200006	75196667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75196797_75196973_75197040_75197947_75198050_75199650
WTC11_00081067	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	52.7587888026096	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-75483807	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
WTC11_00081068	chr7	-	5306	24	Fusion	ENSG00000272391.6_ENSG00000127957.19	novel	5867	15	NA	NA	0	32	multi-exon	TRUE	canonical	1	1	junction_23	63.4794520436183	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATCTGGACCTTG	-75528034	False	NA	NA	False	AAAAAG	-36	NA	75528051	75418763	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75484197_75484301_75485863_75486248_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75526027_75527564
WTC11_00081069	chr7	-	3690	13	FSM	ENSG00000272391.6	ENST00000607367.5	3690	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	45.5390552773721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTCCCCTGTCCCTGT	-75439717	True	NA	NA	False	AAAAAG	-4	NA	75442719	75418795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75442144
WTC11_00081070	chr7	-	563	3	FSM	ENSG00000272391.6	ENST00000473609.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	46	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCCTCCTTTGACTCC	-75424790	False	NA	NA	False	NA	NA	NA	75424809	75423101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75423204_75424048_75424226_75424525
WTC11_00081072	chr7	-	321	3	FSM	ENSG00000272391.6	ENST00000479864.1	423	3	0	102	0	-102	multi-exon	FALSE	canonical	3	72	junction_2	24.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGCTGAGCCAGGAGG	-75434666	False	19	NA	False	NA	NA	NA	75437668	75425633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75425709_75426361_75426454_75437514
WTC11_00081073	chr7	-	715	5	FSM	ENSG00000272391.6	ENST00000398379.2	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	31.6415470544662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGAGACTGTACTGAGT	-75481836	False	NA	NA	False	NA	NA	NA	75484328	75441053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75484197
WTC11_00081074	chr7	-	1316	8	FSM	ENSG00000127957.19	ENST00000394921.8	1316	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.6426701557867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCTCATAGTTCTT	-75528034	False	NA	NA	False	ATTAAA	-21	NA	75528051	75507746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75507868_75510930_75511115_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527564
WTC11_00081075	chr7	-	1496	9	FSM	ENSG00000127957.19	ENST00000418756.5	1490	9	0	-6	0	0	multi-exon	FALSE	canonical	3	11	junction_5	11.0333301863037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCTCATAGTTCTT	-75526718	True	NA	NA	False	ATTAAA	-21	NA	75528123	75507746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75525964_75527564
WTC11_00081077	chr7	-	8064	31	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27400	3	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_29	20.9645467926741	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGGTGGTGATTGACCA	-75635331	True	NA	0	True	AATAAA	-20	NA	75639243	75533294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
WTC11_00081081	chr7	-	1444	10	FSM	ENSG00000189077.11	ENST00000417509.5	1444	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	28.2349052865989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCGTGTGTGTTCTCCT	-75992975	True	NA	-1	True	AATAAA	-19	NA	75994616	75986982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
WTC11_00081082	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	27.7454500774451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-75993015	True	NA	-59	True	NA	NA	NA	75994656	75987040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
WTC11_00081083	chr7	-	765	8	FSM	ENSG00000189077.11	ENST00000480899.5	765	8	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	29.8745677109873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGGCTTCTGTCCTG	-75987537	False	NA	NA	False	NA	NA	NA	75989178	75987149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164
WTC11_00081084	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_10	28.0748703845172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	-75992954	True	NA	-32	True	AATACA	-22	NA	75994595	75986830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
WTC11_00081086	chr7	-	1405	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	9	1	6	-1	multi-exon	FALSE	canonical	2	11	junction_8	58.5948749892002	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCCTGTACTGATTCT	-76045778	True	NA	-11	True	NA	NA	NA	76047994	75996338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
WTC11_00081087	chr7	-	1408	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	6	-3	6	-1	multi-exon	FALSE	canonical	2	5	junction_8	60.506068910482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCCTGTACTGATTCT	-76045778	True	NA	-11	True	NA	NA	NA	76047994	75996338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
WTC11_00081088	chr7	-	1131	8	NIC	ENSG00000127952.17	novel	1411	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	72.289949057209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
WTC11_00081092	chr7	-	1241	9	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_8	25.6097515606848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
WTC11_00081095	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-76320395	True	NA	-20	True	AATAAA	-14	NA	76358991	76326798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76330234_76358721
WTC11_00081096	chr7	-	2307	8	ISM	ENSG00000146700.9	ENST00000275560.4	2800	11	9088	-8	-7119	5	3prime_fragment	FALSE	canonical	3	24	junction_7	20.102797043685	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTTTGAGCACAAAT	-76399056	False	NA	-4	True	AATAAA	-29	NA	76400609	76389328	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285
WTC11_00081097	chr7	-	2467	9	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-1	5	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	21.3175397267133	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTTTGAGCACAAAT	-76408145	True	NA	-4	True	AATAAA	-29	NA	76409698	76389328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76404306_76404506_76409413
WTC11_00081099	chr7	-	1528	7	FSM	ENSG00000146707.15	ENST00000310842.9	1528	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	17.1431878274984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	76627279	76609985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76625521_76625684_76625999_76626216_76626707
WTC11_00081102	chr7	-	2155	1	FSM	ENSG00000231087.2	ENST00000429043.1	1054	1	-17	-1084	-17	1084	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGGCCAGGAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	76969267	76967112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76967100_76969300
WTC11_00081103	chr7	-	959	1	FSM	ENSG00000213542.3	ENST00000453064.1	794	1	-146	-19	-146	19	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTACATAAAAATAATTAA	-77116320	False	NA	NA	False	ACTAAA	-29	NA	77116338	77115379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77115400_77116300
WTC11_00081104	chr7	-	3355	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	-164	-11	-164	11	multi-exon	FALSE	canonical	3	113	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTATGGTACTTTAT	-77696376	False	NA	1	True	AATAAA	-15	NA	77696441	77681569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77684252_77685201_77685329_77695895
WTC11_00081105	chr7	-	2394	2	FSM	ENSG00000214293.10	ENST00000398043.3	2394	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGGCTAGACTCTGTC	-77694718	True	NA	NA	False	NA	NA	NA	77696265	77683304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77685329_77695895
WTC11_00081107	chr7	-	902	3	NNC	ENSG00000135211.6	novel	877	2	NA	NA	0	53985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACACATTTTTTTTTTT	-77795587	True	NA	NA	False	NA	NA	NA	77798434	77739742	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_77739769_77793728_77794424_77798253
WTC11_00081108	chr7	-	890	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	-13	0	13	multi-exon	FALSE	canonical	3	353	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAATAATCTGTTGTA	-77795587	True	NA	4	True	AATAAA	-31	NA	77798434	77793714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77794424_77798253
WTC11_00081115	chr7	-	7532	38	NIC	ENSG00000153956.16	novel	7542	39	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_10	11.0542853342619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCGGTTTGGGTTTTCT	-82442165	True	NA	-2	True	AATAAA	-20	NA	82443803	81946443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_81950509_81959274_81959358_81959719_81959830_81961893_81962024_81962439_81962496_81964055_81964109_81964206_81964360_81965593_81965666_81967168_81967208_81967595_81967664_81968886_81968974_81969880_81969985_81970674_81970738_81971776_81971865_81974454_81974553_81982566_81982628_81984634_81984712_81991184_81991247_81994867_81994940_81997178_81997236_82005422_82005498_82005764_82005840_82007678_82007757_82012153_82012244_82013460_82013511_82014400_82014480_82032796_82032902_82038076_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
WTC11_00081118	chr7	-	483	5	FSM	ENSG00000153956.16	ENST00000492734.1	594	5	0	111	0	-111	multi-exon	FALSE	canonical	3	47	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGTTGAGCTATTCA	NA	False	NA	NA	False	NA	NA	NA	82038235	82012153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_82012244_82013460_82013511_82014400_82014480_82032796_82032902_82038076
WTC11_00081121	chr7	-	333	3	FSM	ENSG00000170381.14	ENST00000644381.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCTCACGCAATTTACA	-83462000	True	NA	NA	False	NA	NA	NA	83462160	83407139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_83407240_83408367_83408488_83462047
WTC11_00081122	chr7	-	369	2	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1254	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCACAGGGGATGCGAT	NA	False	NA	NA	False	NA	NA	NA	83465349	83459715	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_83459784_83465048
WTC11_00081124	chr7	-	8095	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	18	0	-18	multi-exon	FALSE	canonical	3	144	junction_15	14.9330537315714	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTAAAATATCCATG	-84194708	False	NA	NA	False	AGTAAA	-2	NA	84194789	83955794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
WTC11_00081125	chr7	-	553	5	FSM	ENSG00000075213.11	ENST00000420047.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	59.8806103843306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGTAACGCTGGCTTT	-84195080	False	NA	NA	False	GGGGCT	-40	NA	84195161	84110475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195137
WTC11_00081127	chr7	-	6787	19	FSM	ENSG00000153993.14	ENST00000284136.11	6772	19	0	-15	0	15	multi-exon	FALSE	canonical	1	4	junction_10	3.14122332071715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTTGTTTTCAAACCC	-85187039	True	NA	NA	False	TATAAA	-18	NA	85187056	84995537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_84999866_85006801_85006942_85012781_85012847_85015058_85015217_85018251_85018294_85020232_85020322_85022390_85022614_85036888_85037034_85040672_85040743_85042170_85042286_85055716_85055860_85065423_85065553_85068190_85068285_85072961_85073082_85081516_85081580_85097804_85097966_85121740_85121932_85153607_85153740_85186677
WTC11_00081128	chr7	-	6820	22	FSM	ENSG00000164659.15	ENST00000450689.7	6796	22	-37	13	-37	-13	multi-exon	FALSE	canonical	3	11	junction_21	43.2107633353915	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACACTGAAATTTGAGT	-87059526	True	NA	-27	True	AATAAA	-10	NA	87059691	86876918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87059324
WTC11_00081130	chr7	-	4710	21	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19292	930	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_20	31.9012538938519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTGAAGGTGGT	-87038093	True	NA	-21	True	AATGAA	-14	NA	87040223	86879008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755
WTC11_00081134	chr7	-	817	2	FSM	ENSG00000224046.3	ENST00000670440.2	836	2	14	5	14	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTGTGTTGATAACT	-87151973	True	NA	-4	True	AATAAA	-14	NA	87152331	87151423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87151659_87151749
WTC11_00081140	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.0269737329517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-87343629	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
WTC11_00081141	chr7	-	1244	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	-3	6	0	multi-exon	FALSE	canonical	3	44	junction_2	28.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-87343642	True	NA	NA	False	AATAAA	-15	NA	87345528	87324586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345304
WTC11_00081148	chr7	-	702	6	FSM	ENSG00000075303.13	ENST00000444363.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	20.9437341465174	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGGCAACAAACTATGG	-87874549	True	NA	NA	False	NA	NA	NA	87876357	87854256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87854311_87856291_87856390_87858630_87858752_87860071_87860170_87860571_87860641_87876095
WTC11_00081149	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2409	junction_3	183.184528354802	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	-88191010	True	NA	-5	True	AATAAA	-17	NA	88220038	88205114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
WTC11_00081151	chr7	-	465	3	FSM	ENSG00000223969.7	ENST00000412669.2	497	3	21	11	21	-8	multi-exon	FALSE	canonical	3	8	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTATCATTTGTGGAA	-90597343	False	NA	-10	True	AATAAA	-6	NA	90597377	90590630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_90590729_90591715_90591902_90597196
WTC11_00081152	chr7	-	3866	3	FSM	ENSG00000127989.14	ENST00000351870.8	3941	3	23	52	0	-52	multi-exon	FALSE	canonical	3	159	junction_2	5.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTAATACTAGCAAGATA	-91878821	True	NA	NA	False	NA	NA	NA	91880679	91870980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91874765_91880054_91880114_91880656
WTC11_00081153	chr7	-	581	4	FSM	ENSG00000127989.14	ENST00000456229.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	70.0729778318449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGTTCTCCTGAATCCT	-91878821	True	NA	NA	False	NA	NA	NA	91880679	91874314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91874765_91876877_91876927_91880054_91880114_91880656
WTC11_00081155	chr7	-	4328	2	FSM	ENSG00000127989.14	ENST00000425936.1	720	2	0	-3608	0	-117	multi-exon	FALSE	canonical	3	170	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCAATTTGGGAG	-91878805	True	NA	NA	False	NA	NA	NA	91880663	91871045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91874765_91880054
WTC11_00081157	chr7	-	3300	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	-145	0	145	multi-exon	FALSE	canonical	3	689	junction_9	72.5260276821916	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCATTTTATTAGCAGT	-92119143	True	NA	NA	False	NA	NA	NA	92134477	92112007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
WTC11_00081158	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	230.758866180668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-92134792	False	NA	63	True	NA	NA	NA	92134803	92113411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
WTC11_00081159	chr7	-	555	2	FSM	ENSG00000001630.18	ENST00000482924.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCCGTTACAAACGAAGA	-92117374	False	NA	NA	False	NA	NA	NA	92117448	92113693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92113844_92117043
WTC11_00081161	chr7	-	5188	19	FSM	ENSG00000001631.17	ENST00000340022.6	4553	19	-24	-611	-11	167	multi-exon	FALSE	canonical	2	4	junction_18	28.5342008348569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTCACCATCCATTCT	-92246099	True	NA	NA	False	NA	NA	NA	92246124	92198801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245464
WTC11_00081163	chr7	-	3943	17	NIC	ENSG00000001631.17	novel	4553	19	NA	NA	3	0	intron_retention	FALSE	canonical	2	5	junction_16	25.9972955324203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-92243191	True	NA	-22	True	AATAAA	-19	NA	92245871	92199412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245464
WTC11_00081171	chr7	-	754	2	FSM	ENSG00000127980.16	ENST00000477342.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAATACTGTAGTATAAA	-92489783	False	NA	NA	False	NA	NA	NA	92489794	92487289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92487542_92489292
WTC11_00081176	chr7	-	3041	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	-4	-670	-1	670	multi-exon	FALSE	canonical	0	0	junction_1	232.249025832187	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGATTTTTTTTATTTT	-92587132	True	NA	NA	False	NA	NA	NA	92590394	92560087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
WTC11_00081177	chr7	-	1876	5	ISM	ENSG00000234545.8	ENST00000481407.5	2293	9	12673	-423	0	0	3prime_fragment	FALSE	canonical	3	32	junction_1	275.721780060988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-92577707	False	NA	-16	True	AATAAA	-20	NA	92577717	92560792	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92562369_92569822_92569916_92575770_92575822_92577102_92577196_92577654
WTC11_00081178	chr7	-	2326	11	NIC	ENSG00000234545.8	novel	2434	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	228.541134153132	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-92587118	True	NA	-16	True	AATAAA	-20	NA	92590380	92560792	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
WTC11_00081182	chr7	-	854	5	FSM	ENSG00000234545.8	ENST00000494079.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	202.42899989873	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGACAGAGTGCGACTC	-92577707	False	NA	NA	False	NA	NA	NA	92577717	92565507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654
WTC11_00081185	chr7	-	11612	8	FSM	ENSG00000105810.10	ENST00000265734.8	11612	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	19.61361459678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	-92833905	False	1628	2	True	ATTAAA	-19	NA	92833917	92604920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92833872
WTC11_00081186	chr7	-	11789	8	FSM	ENSG00000105810.10	ENST00000424848.3	11663	8	-126	0	-126	0	multi-exon	FALSE	canonical	3	37	junction_7	10.9264703862703	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	-92836687	False	NA	2	True	ATTAAA	-19	NA	92836699	92604920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92836477
WTC11_00081187	chr7	-	339	2	Genic_Genomic	ENSG00000237729.2	novel	252	1	NA	NA	0	13040	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATTAGCCAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	93670077	93656785	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_93656808_93669760
WTC11_00081189	chr7	-	4127	5	FSM	ENSG00000105825.14	ENST00000222543.11	2207	5	0	-1920	0	1920	multi-exon	FALSE	canonical	3	39	junction_2	10.280442597476	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTGTGGTTAAAAGGAA	-93890296	True	NA	NA	False	NA	NA	NA	93890753	93883475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93886897_93887260_93887432_93889034_93889224_93890136_93890320_93890590
WTC11_00081190	chr7	-	583	4	FSM	ENSG00000105825.14	ENST00000647793.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	26.6207938774685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCGCTATTATTTTAAT	-93890296	True	NA	NA	False	NA	NA	NA	93890753	93887380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93887432_93889034_93889221_93890136_93890320_93890590
WTC11_00081191	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	11.6714276000077	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	-94000060	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
WTC11_00081192	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	24.7919341722263	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-94652783	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
WTC11_00081193	chr7	-	1656	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	16	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_3	68.8187815306114	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652841	True	NA	NA	False	AATAAA	-40	NA	94656191	94585222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
WTC11_00081195	chr7	-	1546	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	-14	0	0	multi-exon	FALSE	canonical	3	23	junction_9	62.845489540265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652827	True	NA	NA	False	AATAAA	-40	NA	94656177	94585222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
WTC11_00081205	chr7	-	384	4	FSM	ENSG00000005421.9	ENST00000470502.1	578	4	194	0	194	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCATCTAAAAACCATCA	NA	False	NA	NA	False	AAGAAA	-8	NA	95318393	95311489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_95311578_95315321_95315491_95316733_95316790_95318322
WTC11_00081206	chr7	-	3771	9	FSM	ENSG00000105854.13	ENST00000222572.8	1610	9	0	-2161	0	2161	multi-exon	FALSE	canonical	3	241	junction_6	41.821047332653	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGTT	-95431773	True	NA	NA	False	NA	NA	NA	95435028	95402700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
WTC11_00081207	chr7	-	2490	5	ISM	ENSG00000105854.13	ENST00000222572.8	1610	9	21924	1	-1401	0	intron_retention	FALSE	canonical	3	312	junction_3	18.952242611364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTCTGTGTTTAATT	NA	False	NA	NA	False	ATTAAA	-36	NA	95413104	95404862	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652
WTC11_00081208	chr7	-	1583	9	NNC	ENSG00000105854.13	novel	1610	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	97.8390738662218	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTCTGTGTTTAATT	-95431773	True	NA	NA	False	ATTAAA	-36	NA	95435028	95404862	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412452_95416241_95416298_95424514_95424586_95434877
WTC11_00081210	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	90.6862723900371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
WTC11_00081216	chr7	-	3145	18	FSM	ENSG00000004864.14	ENST00000265631.10	3141	18	0	-4	0	4	multi-exon	TRUE	canonical	3	336	junction_8	45.6483474651337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTCTTGTGCATG	-96316271	True	NA	1	True	AATAAA	-20	NA	96322098	96120215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185012_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
WTC11_00081217	chr7	-	3197	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	-5	0	4	multi-exon	FALSE	canonical	2	13	junction_9	101.488915650922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTCTTGTGCATG	-96316320	True	NA	1	True	AATAAA	-20	NA	96322147	96120215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
WTC11_00081219	chr7	-	729	3	FSM	ENSG00000127922.10	ENST00000623693.3	729	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3876.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTCCTGTTTCTAATGT	-96654214	True	NA	NA	False	NA	NA	NA	96709780	96645390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96645933_96694797_96694892_96709687
WTC11_00081220	chr7	-	582	3	FSM	ENSG00000127922.10	ENST00000623498.3	582	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3877.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGAGCATGCTCCGG	-96654260	True	NA	NA	False	NA	NA	NA	96709826	96645587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96645937_96694797_96694892_96709687
WTC11_00081221	chr7	-	3551	2	FSM	ENSG00000127922.10	ENST00000482389.1	2773	2	1	-779	1	772	multi-exon	FALSE	canonical	3	7023	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGGTGGCCTGAAATAC	NA	False	NA	NA	False	NA	NA	NA	96697371	96687989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96688967_96694797
WTC11_00081222	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7023	junction_1	367	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	-96654325	True	NA	NA	False	AATACA	-19	NA	96709891	96687950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96688967_96694797_96694892_96709687
WTC11_00081223	chr7	-	1937	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	448	0	3	multi-exon	FALSE	canonical	3	423	junction_7	62.3204086422204	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTAGTCATTTATGTT	-97867097	True	NA	-2	True	AATAAA	-19	NA	97872408	97852124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
WTC11_00081224	chr7	-	2349	14	FSM	ENSG00000070669.17	ENST00000175506.8	2356	14	0	7	0	3	multi-exon	FALSE	canonical	2	4	junction_13	193.64858674395	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTAGTCATTTATGTT	NA	False	NA	-2	True	AATAAA	-19	NA	97872542	97852124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718_97871997_97872350
WTC11_00081225	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	167.575684393649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	-97867083	True	NA	-29	True	NA	NA	NA	97872394	97852151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
WTC11_00081226	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	145.233337158595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	-97867125	True	NA	-81	True	NA	NA	NA	97872436	97852203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
WTC11_00081228	chr7	-	1676	1	FSM	ENSG00000183444.10	ENST00000442908.2	985	1	-910	219	-910	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCACCTGTGGGTCTC	-97967903	False	NA	98	True	TATAAA	-3	NA	97967984	97966308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97966300_97968000
WTC11_00081229	chr7	-	950	3	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1935	68	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	49	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCACCTGTGGGTCTC	-97969404	True	NA	98	True	TATAAA	-3	NA	97972339	97966308	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_97966978_97969769_97969846_97972134
WTC11_00081230	chr7	-	1910	3	FSM	ENSG00000285725.1	ENST00000650204.1	1910	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTTTCTCTAAAAT	-97970323	False	NA	30	True	NA	NA	NA	97970404	97966376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97966978_97969004_97970228_97970318
WTC11_00081231	chr7	-	1028	4	Fusion	ENSG00000183444.10_ENSG00000243554.1	novel	447	6	NA	NA	-103	-207	multi-exon	FALSE	canonical	3	83	junction_1	24.2257897474755	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCGCCTGTCAGTTG	-97969422	True	NA	NA	False	TATAAA	-15	NA	97972357	97966296	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
WTC11_00081232	chr7	-	6496	26	FSM	ENSG00000205356.10	ENST00000447648.7	6545	26	47	2	-10	-2	multi-exon	FALSE	canonical	3	18	junction_24	6.61948638490933	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTCAGCCGGAAACAAG	-98251652	True	NA	NA	False	NA	NA	NA	98252185	98214625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98217504_98217691_98217812_98217935_98218043_98221660_98221754_98222385_98222522_98222989_98223171_98223661_98223719_98224800_98224881_98225005_98225103_98228013_98228117_98229038_98229167_98230960_98231119_98231223_98231374_98231803_98231960_98232826_98232973_98233420_98233912_98236775_98236922_98238508_98238611_98240850_98240952_98241069_98241245_98243466_98243593_98244570_98244694_98244884_98245068_98245921_98246166_98251393_98251549_98252125
WTC11_00081233	chr7	-	3676	14	FSM	ENSG00000006453.14	ENST00000005260.9	3645	14	0	-31	0	31	multi-exon	TRUE	canonical	3	145	junction_9	19.8592681774626	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCAGGACTGGCC	-98395618	True	NA	17	True	AAAACA	-32	NA	98401090	98291618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98293597_98294073_98294112_98304195_98304377_98306438_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
WTC11_00081235	chr7	-	881	1	FSM	ENSG00000214389.2	ENST00000398259.2	784	1	-24	-73	-24	73	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGATTCCTGGCTGG	NA	False	NA	NA	False	AATAAA	-38	NA	98386608	98385727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98385700_98386600
WTC11_00081237	chr7	-	5672	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	-4	0	4	multi-exon	TRUE	canonical	3	104	junction_2	20.8832642717464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTCTGTTATTTTGG	-99142300	True	NA	-13	True	AATAAA	-17	NA	99144108	99027435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
WTC11_00081239	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	96.7752034355909	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-99361814	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
WTC11_00081240	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	302.454624696003	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-99361807	True	NA	NA	False	NA	NA	NA	99408590	99396522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
WTC11_00081242	chr7	-	533	2	FSM	ENSG00000106246.18	ENST00000419981.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTTCCATAACCTGCG	-99435139	True	NA	NA	False	NA	NA	NA	99438755	99434924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99435269_99438566
WTC11_00081243	chr7	-	658	3	FSM	ENSG00000241468.8	ENST00000491560.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	6939	junction_1	358	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99432022	False	NA	-36	True	AATAAA	-13	NA	99460465	99458194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99459146_99459264_99460085
WTC11_00081244	chr7	-	327	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	-4	0	-1	multi-exon	FALSE	canonical	3	464	junction_1	1118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATTGCCTGCCTGTCT	-99437721	True	NA	-32	True	AATAAA	-17	NA	99466164	99458190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99460085_99460194_99466110
WTC11_00081246	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	2008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	-99437724	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99460085_99460194_99466128
WTC11_00081249	chr7	-	2075	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	-47	-11	13	9	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTTCTTTTCTT	-99497617	True	NA	1	True	AATAAA	-31	NA	99500311	99493230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99494632_99499637
WTC11_00081250	chr7	-	1467	2	FSM	ENSG00000160908.15	ENST00000481881.1	1619	2	0	152	0	-152	multi-exon	FALSE	canonical	3	111	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCCCCCCTTCCTGGTT	-99497581	True	NA	NA	False	NA	NA	NA	99500275	99498013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99498843_99499637
WTC11_00081252	chr7	-	3314	6	FSM	ENSG00000146833.16	ENST00000349062.7	3314	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7.47261667690776	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAATGATGTCTTTGG	-99918721	True	NA	-5	True	AATATA	-19	NA	99919530	99890402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99892747_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
WTC11_00081254	chr7	-	2403	16	NNC	ENSG00000166508.18	novel	2467	15	NA	NA	0	48956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	552.813892734255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAGAAAGAAAAGAAAAAG	-100101281	False	NA	NA	False	NA	NA	NA	100101310	100043771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100043802_100092734_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00081256	chr7	-	2428	16	NNC	ENSG00000166508.18	novel	2467	15	NA	NA	0	41457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	552.813892734255	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCTAGGCAGCCAAATTA	-100079089	True	NA	NA	False	AAAAAG	-12	NA	100101370	100051270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100051312_100092780_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00081257	chr7	-	2799	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	-2	0	1	multi-exon	FALSE	canonical	3	141	junction_4	20.0957706993288	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGTGGTTTTGTGCAA	-100078306	True	NA	0	True	ATTAAA	-23	NA	100081723	100069970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
WTC11_00081259	chr7	-	2547	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	19	-21	0	1	multi-exon	FALSE	canonical	3	17	junction_3	82.624989494032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGTGGTTTTGTGCAA	-100078306	True	NA	0	True	ATTAAA	-23	NA	100081723	100069970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
WTC11_00081260	chr7	-	3095	6	FSM	ENSG00000166526.18	ENST00000428683.5	999	6	-158	-1938	-158	0	multi-exon	FALSE	canonical	2	10	junction_5	67.6951992389416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-100082688	False	NA	-21	True	ATTAAA	-2	NA	100082706	100069991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100082300
WTC11_00081266	chr7	-	2948	14	FSM	ENSG00000166508.18	ENST00000354230.7	2975	14	28	-1	5	0	multi-exon	FALSE	canonical	3	39	junction_13	573.047660584855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-100100723	False	22281	-1	True	ATTAAA	-23	NA	100100752	100092727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
WTC11_00081267	chr7	-	3682	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	-89	-509	-89	508	multi-exon	FALSE	canonical	3	1069	junction_11	362.496357867849	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTGAAAAACAAGTTAAT	-100102000	False	NA	9	True	AATAAA	-30	NA	100102029	100092219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00081268	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	354.740038476007	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-100079116	True	NA	-1	True	ATTAAA	-23	NA	100101397	100092727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00081269	chr7	-	533	3	FSM	ENSG00000166508.18	ENST00000493352.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	1976	junction_2	84	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGACAAGGGGCAGACAG	-100095356	False	NA	NA	False	AATGAA	-39	NA	100095664	100093315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093402_100094172_100094342_100095386
WTC11_00081270	chr7	-	1327	5	FSM	ENSG00000166508.18	ENST00000463722.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_3	275.135761943081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCCAAACAAAACAGA	-100079128	True	NA	NA	False	NA	NA	NA	100101409	100098058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100098291_100098577_100098716_100099022_100099754_100100013_100100094_100101263
WTC11_00081272	chr7	-	776	3	FSM	ENSG00000166508.18	ENST00000467516.5	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	581.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCAGAACCAGTACCCT	-100100444	False	NA	NA	False	NA	NA	NA	100100473	100099318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100099754_100100013_100100094_100100212
WTC11_00081275	chr7	-	2670	14	FSM	ENSG00000106290.16	ENST00000693225.1	2885	14	21	194	0	0	multi-exon	FALSE	canonical	3	104	junction_10	349.412152151304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105888	True	NA	-3	True	AATAAA	-22	NA	100119337	100107069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113615_100113770_100113867_100113955_100114053_100114269_100118879
WTC11_00081276	chr7	-	2736	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	-9	0	0	multi-exon	FALSE	canonical	3	151	junction_14	245.643428321523	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105897	True	NA	-3	True	AATAAA	-22	NA	100119346	100107069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
WTC11_00081277	chr7	-	2385	15	FSM	ENSG00000106290.16	ENST00000692408.1	2579	15	0	194	0	0	multi-exon	FALSE	canonical	3	275	junction_13	226.102965527673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105900	True	NA	-3	True	AATAAA	-22	NA	100119349	100107069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114083_100114269_100119203
WTC11_00081278	chr7	-	2688	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	-264	0	70	multi-exon	FALSE	canonical	3	738	junction_14	110.253256696775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGCCAGCCTGAGGAAT	-100105909	True	NA	NA	False	NA	NA	NA	100119358	100106805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
WTC11_00081279	chr7	-	2305	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	-8	0	0	multi-exon	FALSE	canonical	3	55	junction_14	269.388044217532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105915	True	NA	-3	True	AATAAA	-22	NA	100119364	100107069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
WTC11_00081289	chr7	-	2531	11	NNC	ENSG00000146826.17	novel	2555	11	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	20.5740127345154	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACTAGTTTGTGTAC	-100157054	True	NA	-6	True	ATTAAA	-20	NA	100158693	100154420	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100155165_100155261_100155456_100155670_100155826_100156381_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842_100157939_100158088
WTC11_00081290	chr7	-	2561	11	FSM	ENSG00000146826.17	ENST00000316937.8	2555	11	0	-6	0	3	multi-exon	FALSE	canonical	3	32	junction_10	11.1427106217473	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGTTTGTGTACTGAT	-100157084	True	NA	-2	True	ATTAAA	-24	NA	100158723	100154416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100155165_100155261_100155456_100155670_100155826_100156385_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842_100157939_100158088
WTC11_00081293	chr7	-	786	4	FSM	ENSG00000213420.8	ENST00000486702.1	787	4	1	0	1	0	multi-exon	FALSE	canonical	3	103	junction_1	14.522013940528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCAGTAGGGGAGACAC	-100168249	False	NA	NA	False	NA	NA	NA	100172217	100171068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100171437_100171538_100171679_100171778_100171926_100172086
WTC11_00081297	chr7	-	2871	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	402	-1451	0	337	multi-exon	FALSE	canonical	3	66	junction_1	111.979784882014	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGTGGTGGCACAGC	-100332448	True	NA	NA	False	AATAAA	-35	NA	100335905	100318884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
WTC11_00081298	chr7	-	1060	2	FSM	ENSG00000078319.11	ENST00000676256.1	1086	2	36	-10	36	3	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	-100329653	False	NA	3	True	AATAAA	-27	NA	100329715	100320904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100328835
WTC11_00081299	chr7	-	1103	7	FSM	ENSG00000078319.11	ENST00000676204.1	1097	7	0	-6	0	3	multi-exon	FALSE	canonical	2	9	junction_6	141.059089273491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	-100332448	True	NA	3	True	AATAAA	-27	NA	100335905	100320904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325869_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335674
WTC11_00081300	chr7	-	796	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	-4	-1	3	multi-exon	FALSE	canonical	3	11	junction_1	129.117001204334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	-100332482	True	NA	3	True	AATAAA	-27	NA	100335939	100320904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
WTC11_00081301	chr7	-	916	7	FSM	ENSG00000078319.11	ENST00000691424.1	1180	7	24	240	0	3	multi-exon	FALSE	canonical	3	66	junction_1	114.886417338556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	-100335913	False	NA	3	True	AATAAA	-27	NA	100335975	100320904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332577_100335837
WTC11_00081302	chr7	-	763	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	-13	0	13	multi-exon	FALSE	canonical	3	103	junction_1	103.9838448991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTTATAGCAGTGTGA	-100332493	True	NA	NA	False	ATTAAA	-34	NA	100335950	100325643	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
WTC11_00081304	chr7	-	719	4	FSM	ENSG00000078319.11	ENST00000686263.1	758	4	28	11	3	-10	multi-exon	FALSE	canonical	3	111	junction_3	108.003086375653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCATTGGTTTTCATTAT	-100332499	True	NA	NA	False	AATAAA	-7	NA	100335956	100329906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100330285_100330462_100330550_100332441_100332577_100335837
WTC11_00081305	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	234	junction_3	50.622788017519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	-100332459	True	NA	NA	False	AATAAA	-21	NA	100335916	100329986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
WTC11_00081306	chr7	-	959	3	ISM	ENSG00000078487.18	ENST00000472716.1	617	5	-572	1478	-372	-1478	5prime_fragment	FALSE	canonical	2	4	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTCAAGAGTGAGGG	-100424334	False	NA	NA	False	AATAAA	-3	NA	100429364	100420623	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100420679_100425029_100425137_100428567
WTC11_00081307	chr7	-	958	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	-443	-41	-16	40	multi-exon	FALSE	canonical	3	117	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGGGGTTATCCACTTA	-100431483	True	NA	8	True	AATAAA	-41	NA	100436513	100435241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435847
WTC11_00081308	chr7	-	762	2	FSM	ENSG00000160813.7	ENST00000470295.5	758	2	0	-4	0	4	multi-exon	FALSE	canonical	3	1009	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTTGGAGGCCTAAA	-100431106	False	NA	-28	True	AATAAA	-22	NA	100436136	100435277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630
WTC11_00081309	chr7	-	969	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	-4	0	4	multi-exon	FALSE	canonical	3	799	junction_2	105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTTGGAGGCCTAAA	-100431393	True	NA	-28	True	AATAAA	-22	NA	100436423	100435277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100435768_100435847
WTC11_00081310	chr7	-	967	4	FSM	ENSG00000160813.7	ENST00000292330.3	963	4	0	-4	0	4	multi-exon	FALSE	canonical	3	574	junction_3	177.623196683316	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTTGGAGGCCTAAA	-100431467	True	NA	-28	True	AATAAA	-22	NA	100436497	100435277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100435768_100435847_100436065_100436140
WTC11_00081311	chr7	-	802	3	NIC	ENSG00000160813.7	novel	963	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	228.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431443	True	NA	-32	True	AATAAA	-18	NA	100436473	100435281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100435534_100435847_100436065_100436140
WTC11_00081312	chr7	-	1116	2	NIC	ENSG00000160813.7	novel	942	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	574	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431443	True	NA	-32	True	AATAAA	-18	NA	100436473	100435281	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100436065_100436140
WTC11_00081313	chr7	-	942	3	FSM	ENSG00000160813.7	ENST00000491407.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	217.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGATCCCTGGAGGG	-100431443	True	NA	-40	True	NA	NA	NA	100436473	100435358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100436065_100436140
WTC11_00081316	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	40.904614654095	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	-100476914	True	NA	-30	True	ATTAAA	-19	NA	100479232	100466537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
WTC11_00081319	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	27.7759199686312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	-100580988	True	NA	-5	True	AATAAA	-39	NA	100586129	100574010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
WTC11_00081320	chr7	-	4754	9	FSM	ENSG00000077454.17	ENST00000467201.5	4754	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	24.4118311480315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCCTGCCTGTGTGTGT	-100580861	False	NA	-3	True	TATAAA	-15	NA	100580873	100574659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100577006_100577085_100577390_100577496_100577559_100577663_100577741_100577821
WTC11_00081328	chr7	-	827	9	FSM	ENSG00000106327.13	ENST00000473374.5	891	9	64	0	64	0	multi-exon	FALSE	canonical	2	4	junction_6	4.68874983337776	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAGGTGCTGCAAGG	-100633305	False	NA	NA	False	NA	NA	NA	100633340	100627440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100630888_100631053_100633000_100633124_100633228
WTC11_00081331	chr7	-	5867	28	FSM	ENSG00000146830.11	ENST00000646601.1	5867	28	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_27	32.1218530454378	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	-100693947	False	NA	-8	True	AATAAA	-20	NA	100693968	100679506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100693936
WTC11_00081332	chr7	-	6791	27	FSM	ENSG00000146830.11	ENST00000678049.1	6559	27	-232	0	-232	0	multi-exon	FALSE	canonical	3	28	junction_26	29.1223952539183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	-100694461	False	NA	-8	True	AATAAA	-20	NA	100694482	100679506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100689556_100694109
WTC11_00081333	chr7	-	656	3	FSM	ENSG00000146830.11	ENST00000464111.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACGGGGATGGGGACG	-100686738	False	NA	NA	False	NA	NA	NA	100686759	100685396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100685482_100685973_100686434_100686648
WTC11_00081336	chr7	-	4355	17	FSM	ENSG00000196411.10	ENST00000358173.8	4353	17	0	-2	0	2	multi-exon	TRUE	canonical	3	343	junction_7	56.2399991109531	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGATGGACTAGATT	-100818422	True	NA	-5	True	AATAAA	-34	NA	100827523	100802562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202_100824274_100826978
WTC11_00081340	chr7	-	2172	5	FSM	ENSG00000087085.16	ENST00000241069.11	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	8.44097150806707	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100895705	True	NA	-4	True	AATAAA	-13	NA	100895888	100889993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100890336_100891168_100891339_100892333_100892819_100893164_100894253_100895801
WTC11_00081343	chr7	-	420	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	21	1	21	0	multi-exon	FALSE	canonical	3	23	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-101017113	True	NA	-1	True	AATAAA	-21	NA	101017644	101014319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101014440_101015197_101015268_101017414
WTC11_00081347	chr7	-	2829	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	-8	0	1	multi-exon	FALSE	canonical	3	120	junction_7	18.7077095086953	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTCTGCCCATTAA	-101216079	True	NA	-3	True	AATAAA	-22	NA	101217581	101205975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
WTC11_00081351	chr7	-	2075	6	FSM	ENSG00000106404.14	ENST00000401528.5	2131	6	60	-4	60	4	multi-exon	FALSE	canonical	1	4	junction_3	11.5827457884562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGTGTCAGAAGCGGC	-101225543	False	NA	-24	True	AATAAA	-24	NA	101238760	101232087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101232516_101232603_101232721_101232832_101232915_101234277_101234443_101237364_101237825_101237937
WTC11_00081353	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	248.476692401253	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-101231858	True	NA	NA	False	NA	NA	NA	101245075	101239457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
WTC11_00081354	chr7	-	884	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	-14	0	0	multi-exon	FALSE	canonical	3	486	junction_3	78.1040972036679	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-101231864	True	NA	NA	False	NA	NA	NA	101245081	101239457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
WTC11_00081355	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	284.267870541541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101251222	True	NA	14	True	AATAAA	-39	NA	101252316	101239593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
WTC11_00081357	chr7	-	4756	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	-3839	0	0	multi-exon	FALSE	canonical	3	33	junction_3	75.4733212613717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-101319930	True	NA	-6	True	ATTAAA	-26	NA	101321764	101310913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
WTC11_00081358	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	18.6731759484026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-101319978	True	NA	-6	True	ATTAAA	-26	NA	101321812	101310913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
WTC11_00081361	chr7	-	882	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	-7	0	0	multi-exon	FALSE	canonical	3	32	junction_2	81.1842896679455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	-101319943	True	NA	-60	True	NA	NA	NA	101321777	101314787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
WTC11_00081364	chr7	-	1951	1	NIC	ENSG00000260097.3	novel	3151	8	NA	NA	462	-8286	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAAGGGCCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	102355982	102354031	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102354000_102356000
WTC11_00081365	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	26.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-102463566	True	NA	-20	True	AATAAA	-20	NA	102464863	102456237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102457982_102459603_102459802_102464713
WTC11_00081366	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	55	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-102463566	True	NA	NA	False	NA	NA	NA	102464863	102456833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102457982_102459603_102459711_102464713
WTC11_00081368	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2609	junction_3	82.8908251188809	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	-102468978	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
WTC11_00081369	chr7	-	1761	5	FSM	ENSG00000170667.15	ENST00000477184.5	1787	5	26	0	26	0	multi-exon	FALSE	canonical	1	1	junction_4	21.7298757474588	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGTCCTGGGATCTG	NA	False	NA	NA	False	NA	NA	NA	102493285	102482444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102493115
WTC11_00081370	chr7	-	1924	6	FSM	ENSG00000284981.1	ENST00000644544.1	1005	6	-316	-603	-316	603	multi-exon	FALSE	canonical	3	146	junction_5	170.795081896406	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGATCCTAGAGAAATTG	NA	False	NA	86	True	NA	NA	NA	102544165	102537813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524
WTC11_00081373	chr7	-	2705	8	FSM	ENSG00000168255.20	ENST00000489144.5	2553	8	14	-166	0	166	multi-exon	FALSE	canonical	3	236	junction_2	579.00181523102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTGTAAAATGAGGATG	-102572385	True	NA	NA	False	NA	NA	NA	102572553	102537751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102568185_102569834_102569925_102572471
WTC11_00081374	chr7	-	1077	6	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	218.345964011245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTGTCCGTGACAT	-102572371	True	NA	-21	True	AATAAA	-14	NA	102572539	102537920	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102566996_102567084_102569834_102569925_102572442
WTC11_00081376	chr7	-	4652	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	-22	0	22	multi-exon	FALSE	canonical	3	402	junction_1	125.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATAACAACTATAACT	-102572415	True	NA	NA	False	GATAAA	-42	NA	102572583	102562633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102567084_102569834_102569925_102572471
WTC11_00081380	chr7	-	729	2	FSM	ENSG00000285437.2	ENST00000504101.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCCCGGCCTTACATT	-102572412	True	NA	NA	False	NA	NA	NA	102572580	102569304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102569925_102572471
WTC11_00081383	chr7	-	1777	6	FSM	ENSG00000267368.1	ENST00000340457.8	1342	6	-435	0	-435	0	multi-exon	FALSE	canonical	3	142	junction_5	154.592884700429	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	NA	False	NA	-1	True	AATAAA	-16	NA	102643226	102637024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102642629
WTC11_00081384	chr7	-	1622	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	-24	0	24	multi-exon	FALSE	canonical	3	111	junction_6	249.234797680821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670447	True	NA	-1	True	AATAAA	-16	NA	102671641	102637024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
WTC11_00081387	chr7	-	1550	1	FSM	ENSG00000233025.1	ENST00000428923.1	947	1	-58	-545	-58	545	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTCATTGGATATTC	NA	False	NA	NA	False	NA	NA	NA	103089668	103088118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103088100_103089700
WTC11_00081388	chr7	-	5974	5	FSM	ENSG00000161048.12	ENST00000465647.6	5140	5	-834	0	-373	0	multi-exon	FALSE	canonical	3	13	junction_2	1.78535710713571	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	NA	False	NA	-3	True	AATAAA	-22	NA	103149933	103099775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
WTC11_00081389	chr7	-	4972	6	FSM	ENSG00000161048.12	ENST00000341533.8	4972	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.48711915483254	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	-103149211	False	NA	-3	True	AATAAA	-22	NA	103149232	103099775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103103123_103103423_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
WTC11_00081391	chr7	-	2169	2	FSM	ENSG00000161048.12	ENST00000479761.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAAAAATTAG	-103148955	False	NA	NA	False	NA	NA	NA	103148976	103126789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103128793_103148810
WTC11_00081393	chr7	-	1846	15	FSM	ENSG00000105821.15	ENST00000249270.11	1846	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	97.6813070914903	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTCCAACATAATTT	-103344647	False	NA	38	True	NA	NA	NA	103344666	103312473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
WTC11_00081399	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	119.369602666744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-103337930	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
WTC11_00081401	chr7	-	3035	3	FSM	ENSG00000105821.15	ENST00000412522.1	3033	3	0	-2	0	2	multi-exon	FALSE	canonical	3	367	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGATGTCCTTTGAAT	-103337982	True	NA	NA	False	AATAAA	-16	NA	103344830	103335239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103337812_103341763_103341955_103344558
WTC11_00081402	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	18.1567794240403	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-104205186	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
WTC11_00081404	chr7	-	2696	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	-30	-1452	8	1452	multi-exon	FALSE	canonical	3	11	junction_1	84.1732670679289	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGCTTAGATCTGAAA	-104205212	False	NA	NA	False	NA	NA	NA	104208039	104186090	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
WTC11_00081407	chr7	-	3708	17	NNC	ENSG00000135250.17	novel	3679	16	NA	NA	0	50725	intron_retention	FALSE	non_canonical	0	0	junction_1	73.9169455791431	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAAGAAAATCAATA	-105384372	True	NA	NA	False	NA	NA	NA	105388921	105059978	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105060012_105116377_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
WTC11_00081409	chr7	-	3703	15	FSM	ENSG00000135250.17	ENST00000357311.7	3700	15	0	-3	0	0	multi-exon	FALSE	canonical	3	11	junction_14	74.6058007811999	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-105268997	False	NA	-1	True	ATTAAA	-26	NA	105269015	105116373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805
WTC11_00081416	chr7	-	3496	17	NNC	ENSG00000091127.14	novel	3525	16	NA	NA	0	33951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.235036289713	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCGGTGGCTCACGCCT	-105515634	True	NA	NA	False	AAAAAG	-4	NA	105522258	105405709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105405745_105456553_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
WTC11_00081417	chr7	-	3497	17	NNC	ENSG00000091127.14	novel	3525	16	NA	NA	0	33951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.235036289713	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCGGTGGCTCACGCCT	-105515634	True	NA	NA	False	AAAAAG	-4	NA	105522258	105405709	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105405745_105456552_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
WTC11_00081418	chr7	-	3539	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	13	-27	0	27	multi-exon	FALSE	canonical	3	347	junction_11	32.3639030746018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAACTAAATGAATGTG	-105515634	True	NA	24	True	AATATA	-42	NA	105522258	105456475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
WTC11_00081422	chr7	-	556	3	FSM	ENSG00000185055.11	ENST00000460135.1	717	3	161	0	-33	0	multi-exon	FALSE	canonical	2	2	junction_2	16	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACTGCAGTACATCTT	-105581240	True	NA	NA	False	NA	NA	NA	105581529	105567194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105567491_105569202_105569291_105581357
WTC11_00081426	chr7	-	5707	12	FSM	ENSG00000146776.15	ENST00000419735.8	5707	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.9127712882805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGCACCTGCTCATTT	-105875714	True	NA	-1	True	ATTAAA	-22	NA	105876599	105604771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105607891_105610528_105610604_105613861_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
WTC11_00081427	chr7	-	3102	12	NIC	ENSG00000146776.15	novel	5707	12	NA	NA	-12	501	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	40.884437015601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCATCCAGTTTCCACA	-105875604	True	NA	NA	False	NA	NA	NA	105876489	105607269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_105607894_105610528_105610604_105613861_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
WTC11_00081428	chr7	-	1964	4	FSM	ENSG00000146776.15	ENST00000484475.5	1963	4	0	-1	0	1	multi-exon	FALSE	canonical	3	9	junction_1	50.3388517946129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGATCTGATCTGTTG	NA	False	NA	-2	True	ATTAAA	-17	NA	105624266	105613472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105614817_105617791_105618098_105620199_105620322_105624074
WTC11_00081429	chr7	-	2535	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38790	-1	-14962	1	3prime_fragment	FALSE	canonical	3	88	junction_1	34.1792659696229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGATCTGATCTGTTG	-105639109	False	NA	-2	True	ATTAAA	-17	NA	105639228	105613472	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
WTC11_00081430	chr7	-	2324	8	FSM	ENSG00000146776.15	ENST00000472195.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	47.8918850439323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCACCCTCTGCTTTG	-105691542	False	NA	NA	False	NA	NA	NA	105691637	105613732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105691559
WTC11_00081431	chr7	-	1470	4	FSM	ENSG00000146776.15	ENST00000318724.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	18.3726850393609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATATATAA	-105875697	True	NA	NA	False	AATAAA	-18	NA	105876582	105760372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105761464_105788603_105788709_105875811_105875881_105876377
WTC11_00081432	chr7	-	526	4	NNC	ENSG00000146776.15	novel	870	3	NA	NA	-17	8203	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	25.2234458831902	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGTTGTCTTTTATAT	-105875609	True	NA	-78	True	ATTAAA	-16	NA	105876494	105779919	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105780155_105788603_105788709_105875811_105875881_105876377
WTC11_00081435	chr7	-	6477	3	FSM	ENSG00000105835.13	ENST00000680616.1	3897	3	-313	-2267	-313	13	multi-exon	FALSE	canonical	3	560	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	-106257774	False	NA	2	True	AATAAA	-40	NA	106257796	106248284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363
WTC11_00081436	chr7	-	4449	11	FSM	ENSG00000105835.13	ENST00000681550.1	4489	11	53	-13	-22	13	multi-exon	FALSE	canonical	3	119	junction_10	134.991258976276	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	-106284542	False	NA	2	True	AATAAA	-40	NA	106284579	106248284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284347
WTC11_00081437	chr7	-	4253	11	FSM	ENSG00000105835.13	ENST00000681887.1	1853	11	-13	-2387	-13	13	multi-exon	FALSE	canonical	2	26	junction_10	161.953727959563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	-106284662	False	NA	2	True	AATAAA	-40	NA	106284699	106248284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284663
WTC11_00081438	chr7	-	4582	11	FSM	ENSG00000105835.13	ENST00000222553.8	4360	11	-209	-13	0	13	multi-exon	FALSE	canonical	3	494	junction_6	38.717050507496	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	-106285155	False	NA	2	True	AATAAA	-40	NA	106285192	106248284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
WTC11_00081439	chr7	-	4224	1	FSM	ENSG00000253276.5	ENST00000523505.3	6799	1	124	2451	124	-2451	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTTTAACTTATTAAC	-106659349	True	NA	NA	False	NA	NA	NA	106661034	106656810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106656800_106661000
WTC11_00081440	chr7	-	742	1	FSM	ENSG00000272072.1	ENST00000607036.1	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAATTAAGAATAATATT	NA	False	NA	NA	False	AATAAA	-16	NA	107193300	107192558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107192600_107193300
WTC11_00081442	chr7	-	5418	21	FSM	ENSG00000164597.15	ENST00000393603.7	5418	21	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	17.5933936464799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCTTCCTGTTTTCTT	-107564145	False	NA	NA	False	AATAAA	-18	NA	107564261	107207847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
WTC11_00081444	chr7	-	823	2	FSM	ENSG00000241764.5	ENST00000653575.2	825	2	0	2	0	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTAGTTGTACGGT	-107744088	False	NA	56	True	AATAAA	-21	NA	107744104	107742752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107743404_107743932
WTC11_00081445	chr7	-	2226	3	FSM	ENSG00000091136.15	ENST00000677957.1	2912	3	686	0	390	0	multi-exon	FALSE	canonical	3	377	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-107927941	False	NA	-1	True	AATAAA	-21	NA	107927959	107923798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182
WTC11_00081449	chr7	-	3566	10	FSM	ENSG00000091136.15	ENST00000474380.2	2328	10	-1238	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	51.4263227021597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-107941785	False	NA	-1	True	AATAAA	-21	NA	107941802	107923798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988
WTC11_00081452	chr7	-	5818	34	FSM	ENSG00000091136.15	ENST00000676574.1	5818	34	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	71.2120309477184	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-108003196	False	NA	-1	True	AATAAA	-21	NA	108003213	107923798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932494_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
WTC11_00081457	chr7	-	3764	25	FSM	ENSG00000091136.15	ENST00000679244.1	3764	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	49.4531027843552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGCAGGATGTGGTGA	-108003196	False	NA	NA	False	AATAAA	-16	NA	108003213	107942435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107942620_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
WTC11_00081465	chr7	-	1345	3	FSM	ENSG00000177683.14	ENST00000313516.5	1568	3	223	0	26	0	multi-exon	FALSE	canonical	1	3	junction_2	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAGAGTGTTGTAAAG	-108566419	False	NA	NA	False	TATAAA	-18	NA	108569230	108564085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108565106_108565829_108566023_108569098
WTC11_00081468	chr7	-	4171	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	-17	-3103	1	64	multi-exon	FALSE	canonical	3	68	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTCACTAGGGCATT	-108566894	True	NA	NA	False	NA	NA	NA	108569705	108562067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108566023_108569489
WTC11_00081469	chr7	-	577	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-46	-11816	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	3.74165738677394	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTGTTAATT	-109596455	True	NA	2	True	AATAAA	-22	NA	109597212	109533796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
WTC11_00081470	chr7	-	1134	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-127	-11816	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	7.15454401062709	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTGTTAATT	-109596536	True	NA	2	True	AATAAA	-22	NA	109597293	109533796	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109595209_109595686_109597040
WTC11_00081473	chr7	-	8393	52	FSM	ENSG00000128512.24	ENST00000437633.6	8326	52	-67	0	-59	0	multi-exon	TRUE	canonical	3	18	junction_43	7.89658261000102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTTTACTCCTA	-112203961	True	NA	-1	True	AATAAA	-20	NA	112206466	111726109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_111728721_111732225_111732288_111735053_111735168_111736916_111736990_111739133_111739244_111739395_111739478_111741093_111741215_111741539_111741662_111742012_111742133_111746333_111746418_111747266_111747444_111755514_111755602_111758623_111758791_111760180_111760323_111765117_111765223_111767031_111767119_111769528_111769678_111778275_111778370_111782863_111782925_111783856_111783953_111788661_111788748_111790456_111790606_111808820_111808880_111809300_111809402_111811873_111811950_111822361_111822457_111834587_111834687_111844762_111844898_111846998_111847127_111863371_111863565_111867983_111868155_111869573_111869656_111871989_111872091_111872268_111872353_111872466_111872565_111877029_111877187_111895611_111895719_111900373_111900537_111901676_111901802_111915778_111915905_111935539_111935629_111940109_111940243_111944810_111944872_111945716_111945799_111977131_111977284_111984305_111984391_111989014_111989164_111994134_111994232_111998447_111998504_112000493_112000535_112004047_112004132_112206101
WTC11_00081475	chr7	-	1368	12	FSM	ENSG00000128512.24	ENST00000661654.1	1767	12	0	399	0	-399	multi-exon	FALSE	canonical	3	18	junction_3	5.69035721982866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGTTCCAAGCCCTTTT	-112203902	True	NA	NA	False	NA	NA	NA	112206407	111935506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_111935629_111940109_111940243_111944810_111944872_111945716_111945799_111977131_111977284_111984305_111984391_111989014_111989164_111994134_111994232_111998447_111998504_112000493_112000535_112004047_112004132_112206101
WTC11_00081476	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.3003496460751	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-112788937	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
WTC11_00081477	chr7	-	2659	6	FSM	ENSG00000146802.13	ENST00000454074.5	2659	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	57.6589975632598	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTCACTTTGTCTTT	-112788937	True	NA	NA	False	NA	NA	NA	112790393	112767084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112788453_112788545_112790159
WTC11_00081479	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.40254569624358	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-112938690	True	NA	-1	True	ATTAAA	-20	NA	112939875	112819146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
WTC11_00081480	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	37	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	-113116059	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_113117608_113118067_113118162_113118527
WTC11_00081481	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	170.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-113116065	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_113117608_113118067_113118162_113118439
WTC11_00081483	chr7	-	5907	23	FSM	ENSG00000077063.11	ENST00000160373.8	5904	23	0	-3	0	3	multi-exon	FALSE	canonical	3	38	junction_9	14.6930016511488	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGTACTTTTTATCT	-117870868	True	NA	0	True	AATAAA	-21	NA	117873441	117710647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
WTC11_00081488	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	20.735457160947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120856536	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
WTC11_00081489	chr7	-	1167	6	FSM	ENSG00000106025.9	ENST00000450414.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	70.0713921654194	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCAGCATGGTTTG	-120838786	False	NA	NA	False	NA	NA	NA	120838797	120788321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120814004_120814248_120815728_120815804_120838776
WTC11_00081493	chr7	-	563	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	153	-16350	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	65.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTAATACTTTACATT	-120857980	False	1608	-15	True	AATAAA	-18	NA	120857991	120855126	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_120855382_120856697_120856834_120857819
WTC11_00081495	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_7	196.126061753061	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	-121390588	True	NA	-28	True	AATAAA	-28	NA	121396308	121348877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
WTC11_00081497	chr7	-	4260	11	FSM	ENSG00000008311.16	ENST00000681213.1	4238	11	0	-22	0	0	multi-exon	FALSE	canonical	3	83	junction_10	1070.34269745722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-122098695	True	NA	25	True	NA	NA	NA	122098831	122073564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098748
WTC11_00081500	chr7	-	5823	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	-15	-34	0	0	multi-exon	FALSE	canonical	3	35	junction_23	1377.73664149145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATTTGTTTGTTTGCTT	-122099930	True	NA	-27	True	ATTAAA	-8	NA	122144254	122073548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
WTC11_00081501	chr7	-	5746	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	-18	0	0	multi-exon	FALSE	canonical	3	53	junction_11	1392.71120406705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-122099930	True	NA	25	True	NA	NA	NA	122144254	122073564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
WTC11_00081503	chr7	-	8554	22	FSM	ENSG00000008311.16	ENST00000681708.1	8554	22	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_21	1360.29019679667	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-122099984	True	NA	25	True	NA	NA	NA	122144308	122073564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
WTC11_00081511	chr7	-	3720	18	FSM	ENSG00000008311.16	ENST00000681314.1	3720	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	1450.06008227747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTAGACCTTGACTCAA	-122118284	True	NA	NA	False	NA	NA	NA	122118392	122074895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122079596_122079713_122081499_122081596_122082787_122082892_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306
WTC11_00081515	chr7	-	3287	25	NIC	ENSG00000008311.16	novel	4519	25	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_3	1366.66872903808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATGCTATTTGTTAAT	-122099904	True	NA	-24	True	TATAAA	-18	NA	122144228	122076244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122076608_122077837_122078015_122078861_122078951_122079148_122079328_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
WTC11_00081518	chr7	-	12675	23	FSM	ENSG00000008311.16	ENST00000393376.5	3233	23	-6858	-2584	3559	0	multi-exon	FALSE	canonical	3	725	junction_18	1347.64207303898	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATTTGTTTGTTTGCTT	-122140654	False	NA	-27	True	ATTAAA	-8	NA	122140680	122073548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516
WTC11_00081522	chr7	-	2415	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	2	-40801	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTAAAACACAACTCATA	-122099913	True	NA	NA	False	AATACA	-5	NA	122144237	122141480	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_122143819_122144160
WTC11_00081523	chr7	-	2527	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	-92	0	-92	0	multi-exon	FALSE	canonical	3	56	junction_1	0.471404520791032	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122304828	False	NA	-20	True	AATAAA	-31	NA	122304842	122301302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
WTC11_00081524	chr7	-	3383	5	NIC	ENSG00000128610.12	novel	1368	5	NA	NA	-671	9	intron_retention	FALSE	canonical	3	42	junction_4	6.21992765231236	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTCATACTATTCAGCT	-122311341	False	NA	-11	True	AATAAA	-40	NA	122311362	122301293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122310184
WTC11_00081527	chr7	-	5558	29	NIC	ENSG00000081803.17	novel	6065	30	NA	NA	69	-324	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	15.6744218394172	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATTTAGCATTGTTTT	-122886677	False	NA	NA	False	NA	NA	NA	122886690	122318748	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122436359_122436381_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
WTC11_00081529	chr7	-	2211	2	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	680	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTGGCAGGGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	122822935	122820398	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_122820536_122820861
WTC11_00081530	chr7	-	5611	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	0	-3	0	3	multi-exon	FALSE	canonical	2	16	junction_4	1112.89296430519	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGTATGTGCGTG	-123542287	True	NA	NA	False	TATAAA	-21	NA	123557780	123536993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
WTC11_00081531	chr7	-	5574	5	FSM	ENSG00000128609.16	ENST00000677251.1	5574	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1241.9561938732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTATTATGATCCAAAT	-123542291	True	NA	NA	False	AATAGA	-33	NA	123557784	123537419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403
WTC11_00081537	chr7	-	5522	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	-54	28	32	-28	multi-exon	FALSE	canonical	3	1590	junction_4	435.947244514746	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATATAAATTTATTATG	-123542379	True	NA	NA	False	NA	NA	NA	123557872	123537024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
WTC11_00081546	chr7	-	4051	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	-127	0	2	0	multi-exon	FALSE	canonical	3	42	junction_18	12.051970793194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-124929734	True	NA	-2	True	AATAAA	-18	NA	124929952	124822385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
WTC11_00081547	chr7	-	3935	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	16	-1	-13	0	multi-exon	FALSE	canonical	3	9	junction_12	17.1035923703858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-124929749	True	NA	-2	True	AATAAA	-18	NA	124929967	124822385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
WTC11_00081552	chr7	-	584	1	NIC	ENSG00000128513.16	novel	2920	7	NA	NA	-18819	-1795	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGTTTTATAAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	124877869	124877285	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_124877300_124877900
WTC11_00081553	chr7	-	1832	2	ISM	ENSG00000219445.2	ENST00000420224.1	1918	5	17500	-121	17500	121	3prime_fragment	FALSE	canonical	3	7	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGGTAGTA	-125246781	False	NA	NA	False	ATTAAA	-18	NA	125246791	125229457	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_125230842_125246343
WTC11_00081554	chr7	-	490	4	NNC	ENSG00000219445.2	novel	1918	5	NA	NA	-10	-18810	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTTTTCACCACTTCA	-125262813	True	NA	NA	False	AATGAA	-1	NA	125264301	125248388	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_125248442_125249979_125250058_125262091_125262192_125264042
WTC11_00081556	chr7	-	498	1	FSM	ENSG00000279265.1	ENST00000623124.1	461	1	-32	-5	-32	5	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACATTGTTTGGTTAC	NA	False	NA	-6	True	AATAAA	-21	NA	127350325	127349827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_127349800_127350300
WTC11_00081557	chr7	-	4469	6	FSM	ENSG00000048405.11	ENST00000265827.8	4473	6	4	0	4	0	multi-exon	FALSE	canonical	3	12	junction_5	2.13541565040626	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTGTTATCTTTTATG	-127392247	True	NA	-1	True	ATTAAA	-19	NA	127392704	127370042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_127371815_127373341_127375035_127377185_127377330_127386059_127386156_127391496_127391616_127392059
WTC11_00081560	chr7	-	4195	2	FSM	ENSG00000128594.8	ENST00000249363.4	4195	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGTCCCCAAAGGGTT	-128031425	False	NA	-19	True	AATAAA	-18	NA	128031437	128027070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128030741_128030912
WTC11_00081562	chr7	-	1051	4	FSM	ENSG00000106344.8	ENST00000481788.1	1052	4	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	104.209191319939	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATTTCTAATATGTGTG	-128321411	False	NA	-15	True	NA	NA	NA	128321424	128310396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128321265
WTC11_00081567	chr7	-	2584	16	FSM	ENSG00000106348.18	ENST00000354269.9	2580	16	0	-4	0	3	multi-exon	FALSE	canonical	1	2	junction_15	105.756954066072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTATGCCCTGTCCAT	-128409016	True	NA	1	True	AATAAA	-30	NA	128409982	128392273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409367_128409755
WTC11_00081568	chr7	-	2669	14	ISM	ENSG00000106348.18	ENST00000338791.11	2611	17	3724	0	-310	0	3prime_fragment	FALSE	canonical	1	63	junction_10	63.1330894400751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	-128405292	False	NA	-2	True	AATAAA	-27	NA	128406258	128392276	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766
WTC11_00081575	chr7	-	703	1	FSM	ENSG00000275106.1	ENST00000613068.1	790	1	54	33	54	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCAACATTCATGAGT	-128953238	False	NA	NA	False	CATAAA	-19	NA	128953262	128952559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128952600_128953300
WTC11_00081577	chr7	-	1231	6	ISM	ENSG00000064419.14	ENST00000471166.1	3019	22	-246	43836	15	-43836	5prime_fragment	FALSE	canonical	3	15	junction_5	1.32664991614216	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAATTGTTTAAGTCT	-129050588	True	NA	NA	False	NA	NA	NA	129055129	129001058	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
WTC11_00081579	chr7	-	7083	1	FSM	ENSG00000273329.1	ENST00000608694.1	7083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGACTTTTTTTTTAA	-129611055	True	NA	NA	False	TATAAA	-9	NA	129611630	129604547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_129604500_129611600
WTC11_00081584	chr7	-	1765	9	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	297.806984471486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048195	True	NA	-6	True	AATAAA	-14	NA	130051342	130018291	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130048973_130049145_130051220
WTC11_00081585	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	287.088879428232	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048227	True	NA	-6	True	AATAAA	-14	NA	130051374	130018291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
WTC11_00081586	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	369.761317742629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-130048242	True	NA	-40	True	NA	NA	NA	130051389	130018325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
WTC11_00081590	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_14	30.8263735480262	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	-130202108	True	NA	-4	True	ATTAAA	-31	NA	130205406	130164712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
WTC11_00081591	chr7	-	3377	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	-46	-1370	-43	5	multi-exon	FALSE	canonical	3	23	junction_5	65.4724297185803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTCTTTTTTTCTTT	-130202151	True	NA	1	True	ATTAAA	-36	NA	130205449	130164707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
WTC11_00081593	chr7	-	6263	11	FSM	ENSG00000106477.20	ENST00000223208.10	6292	11	0	29	0	-29	multi-exon	FALSE	canonical	3	71	junction_1	11.534296684237	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCATTCAGTAAACCATA	-130439998	True	NA	NA	False	AAAAAG	-27	NA	130441016	130393799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
WTC11_00081600	chr7	-	737	1	FSM	ENSG00000106477.20	ENST00000469826.2	711	1	288	-314	115	314	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTGTGAACAGAATTT	-130439715	False	NA	NA	False	AATAAA	-32	NA	130440733	130439996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130440000_130440700
WTC11_00081608	chr7	-	5946	10	NNC	ENSG00000128567.17	novel	5986	9	NA	NA	0	47717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	583.652187988026	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAAAAGGATCAGAAACA	-131521552	True	NA	NA	False	NA	NA	NA	131556563	131452544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131452570_131500270_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
WTC11_00081609	chr7	-	6170	7	FSM	ENSG00000128567.17	ENST00000446198.5	6170	7	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_5	156.110804665575	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTAGTTTCCTCGGA	-131521552	True	NA	-5	True	ATTAAA	-25	NA	131556563	131500261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509586_131510827_131511434_131556259
WTC11_00081610	chr7	-	5964	9	NNC	ENSG00000128567.17	novel	5986	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_7	548.446769864679	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-131521598	True	NA	-14	True	ATTAAA	-16	NA	131556609	131500270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510329_131510827_131511434_131556259
WTC11_00081611	chr7	-	5986	9	FSM	ENSG00000128567.17	ENST00000378555.8	5986	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_7	473.283064745613	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-131521617	True	NA	-14	True	ATTAAA	-16	NA	131556628	131500270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
WTC11_00081612	chr7	-	5868	8	NNC	ENSG00000128567.17	novel	2011	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	217	junction_1	444.803786138636	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-131521598	True	NA	-14	True	ATTAAA	-16	NA	131556609	131500270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131504506_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
WTC11_00081614	chr7	-	5899	8	FSM	ENSG00000128567.17	ENST00000322985.9	2011	8	-19	-3869	0	0	multi-exon	FALSE	canonical	3	1105	junction_6	152.328994117927	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTAGTTTCCTCGGA	-131521617	True	NA	-5	True	ATTAAA	-25	NA	131556628	131500261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
WTC11_00081618	chr7	-	1634	9	NNC	ENSG00000106554.13	novel	1604	8	NA	NA	0	69087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	374.921325080343	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATCACAAAAAGAATT	-133064552	True	NA	NA	False	AAAAAG	-1	NA	133082090	132715782	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_132715811_132784867_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
WTC11_00081619	chr7	-	1864	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	-260	0	260	multi-exon	FALSE	canonical	3	992	junction_6	59.3859737442354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTAGATTAGATAACC	-133064552	True	NA	NA	False	NA	NA	NA	133082090	132784609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
WTC11_00081620	chr7	-	1367	4	FSM	ENSG00000106554.13	ENST00000481152.2	1367	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	495.358007460822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTTTGTGTAGCTG	-133070143	True	NA	NA	False	AATAAA	-19	NA	133070198	132972914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132974025_132975168_132975287_133024545_133024628_133070141
WTC11_00081621	chr7	-	1440	1	FSM	ENSG00000283041.1	ENST00000634247.1	1314	1	-26	-100	-26	100	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATCCAATTGCTGAAAG	NA	False	NA	NA	False	ATTAAA	-40	NA	133035946	133034506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_133034500_133035900
WTC11_00081624	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	17.7458045815599	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	-134310369	True	NA	-2	True	AATAAA	-19	NA	134316930	134289331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
WTC11_00081625	chr7	-	1465	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	-104	0	104	multi-exon	FALSE	canonical	3	1131	junction_6	125.151562436299	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTGAGGACTTGACTT	-134448769	True	NA	97	True	NA	NA	NA	134459100	134442251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
WTC11_00081626	chr7	-	1989	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	-28	-31	0	0	multi-exon	FALSE	canonical	3	1131	junction_5	132.214787372669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	-134448799	True	NA	-7	True	AATAAA	-15	NA	134459130	134442355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
WTC11_00081628	chr7	-	639	4	FSM	ENSG00000085662.14	ENST00000484592.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	50.2150929059735	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTGTTGCCCAGGC	-134448799	True	NA	NA	False	NA	NA	NA	134459130	134449577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134449798_134450785_134450903_134451585_134451754_134458996
WTC11_00081630	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.878569196893	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135170489	False	NA	0	True	AATACA	-37	NA	135170524	135165781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
WTC11_00081631	chr7	-	1741	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5870749049728	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135170626	False	NA	0	True	AATACA	-37	NA	135170661	135165781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
WTC11_00081632	chr7	-	1497	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	-3	0	0	multi-exon	FALSE	canonical	3	72	junction_2	67.4405087630737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135166020	True	NA	0	True	AATACA	-37	NA	135170707	135165781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
WTC11_00081633	chr7	-	1720	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	69.1728912861743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135165993	True	NA	-3	True	AATACA	-34	NA	135170680	135165784	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_135166872_135167731_135167808_135168785_135169061_135170398
WTC11_00081634	chr7	-	1650	4	NIC	ENSG00000122783.17	novel	1494	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	100.180947401301	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135170791	False	NA	-3	True	AATACA	-34	NA	135170826	135165784	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_135166872_135167731_135167808_135168748_135169061_135170651
WTC11_00081636	chr7	-	596	4	FSM	ENSG00000122783.17	ENST00000483029.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	74.6234994265658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCAGAAGCCCCTGGA	-135165988	True	NA	NA	False	NA	NA	NA	135170675	135166467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168968_135169061_135170651
WTC11_00081641	chr7	-	5679	14	FSM	ENSG00000105875.15	ENST00000682759.1	5709	14	30	0	1	0	multi-exon	FALSE	canonical	3	28	junction_12	6.97077585182104	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGTTTTCTCTCCC	-135210790	True	NA	NA	False	NA	NA	NA	135211525	135184001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135186316_135186971_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
WTC11_00081643	chr7	-	3290	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	15	-1090	0	0	multi-exon	FALSE	canonical	3	34	junction_1	24.943135328182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505582	True	NA	1	True	AATAAA	-22	NA	135510076	135361794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
WTC11_00081645	chr7	-	3507	12	FSM	ENSG00000080802.20	ENST00000451834.5	3507	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	30.9173785680588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505586	True	NA	1	True	AATAAA	-22	NA	135510080	135361794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
WTC11_00081646	chr7	-	3562	12	FSM	ENSG00000080802.20	ENST00000541284.6	3538	12	-24	0	1	0	multi-exon	FALSE	canonical	3	26	junction_5	36.0777397543849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505632	True	NA	1	True	AATAAA	-22	NA	135510126	135361794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
WTC11_00081647	chr7	-	8284	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	-3642	0	1781	multi-exon	FALSE	canonical	3	35	junction_1	24.6919015063644	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGTATATGTCAGCTGAA	-135505582	True	NA	NA	False	AATAAA	-16	NA	135510076	135382508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
WTC11_00081648	chr7	-	3782	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	1	0	1	0	multi-exon	FALSE	canonical	3	26	junction_4	32.6563929422709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	-135505632	True	NA	NA	False	NA	NA	NA	135510126	135387069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
WTC11_00081654	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	7.25718035235908	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	-137997730	True	NA	2	True	AATAAA	-35	NA	138002047	137912810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
WTC11_00081656	chr7	-	669	4	FSM	ENSG00000157703.16	ENST00000478865.5	665	4	0	-4	0	2	multi-exon	FALSE	canonical	3	17	junction_2	5.79271573232759	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATTCTCCCATGAGG	-138626056	True	NA	1	True	AATAAA	-21	NA	138626094	138594282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968
WTC11_00081657	chr7	-	1408	11	FSM	ENSG00000157703.16	ENST00000288513.9	1413	11	7	-2	7	2	multi-exon	FALSE	canonical	3	6	junction_10	6.81248853210044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATTCTCCCATGAGG	-138663134	False	NA	1	True	AATAAA	-21	NA	138663145	138594282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073
WTC11_00081659	chr7	-	12383	20	FSM	ENSG00000122778.10	ENST00000440172.5	12379	20	0	-4	0	4	multi-exon	FALSE	canonical	3	15	junction_1	9.22420037597717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTGTTGATTTCCTT	-138981300	False	795	-12	True	AATAAA	-25	NA	138981318	138831376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138838113_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138919439_138981082
WTC11_00081661	chr7	-	7186	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	-9	0	9	multi-exon	FALSE	canonical	3	215	junction_9	29.1617853058111	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTGATCTATTTCTA	-139107416	True	NA	5	True	AATAAA	-28	NA	139109720	139043505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
WTC11_00081662	chr7	-	4776	13	FSM	ENSG00000105939.14	ENST00000464606.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	68.8885976696353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGTTT	-139109289	False	2304	85	True	NA	NA	NA	139109354	139045915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079103_139080244_139083779_139084033_139089623_139089760_139109023
WTC11_00081664	chr7	-	3179	9	FSM	ENSG00000105939.14	ENST00000471652.1	3182	9	0	3	0	-3	multi-exon	FALSE	canonical	3	215	junction_5	32.6704664031599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGGAGTTGGATAT	-139107415	True	NA	-3	True	AGTAAA	-18	NA	139109719	139060340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
WTC11_00081667	chr7	-	10815	2	NNC	ENSG00000064393.16	novel	15329	15	NA	NA	144651	47654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATAGATATATATA	-139572349	False	NA	NA	False	NA	NA	NA	139572362	139513915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_139513940_139561571
WTC11_00081670	chr7	-	899	3	FSM	ENSG00000059378.13	ENST00000496624.5	814	3	454	-539	454	-414	multi-exon	FALSE	canonical	2	9	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCGTTCATTGGTTTTAA	NA	False	NA	NA	False	ATTAAA	-25	NA	140028688	140025656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140026349_140027275_140027407_140028612
WTC11_00081672	chr7	-	9220	20	FSM	ENSG00000006459.11	ENST00000397560.7	9220	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	4.49869171502276	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGACTTTGTTCCCTTTT	-140175434	True	NA	0	True	TATAAA	-42	NA	140176983	140084745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140091189_140091803_140092078_140094055_140094139_140096554_140096764_140096898_140097048_140097544_140097643_140098878_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
WTC11_00081676	chr7	-	3853	16	NNC	ENSG00000157800.18	novel	3330	15	NA	NA	0	1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.763162901801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGGAAACTGGAA	-140392378	True	NA	NA	False	NA	NA	NA	140398508	140291947	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_140291975_140333751_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
WTC11_00081679	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_7	59.0634387410551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392400	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
WTC11_00081690	chr7	-	3457	7	FSM	ENSG00000133606.11	ENST00000475010.5	3467	7	0	10	0	-10	multi-exon	FALSE	canonical	3	634	junction_2	75.2050899577652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTGGCTGTTCTGT	-140479313	False	NA	-23	True	AATAAA	-10	NA	140479336	140453056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140454730_140455094_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
WTC11_00081696	chr7	-	1711	5	FSM	ENSG00000133606.11	ENST00000443720.6	1601	5	131	-241	0	229	multi-exon	FALSE	canonical	3	711	junction_2	49.6506545777596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCTGTAAAAGGGGAAT	-140470617	True	NA	NA	False	NA	NA	NA	140479368	140455950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
WTC11_00081702	chr7	-	9571	19	FSM	ENSG00000157764.14	ENST00000496384.7	9578	19	0	7	0	3	multi-exon	FALSE	canonical	3	12	junction_1	12.3714376341556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCATCAAGACTATTTT	-140924773	False	NA	-6	True	AATAAA	-19	NA	140924810	140719333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140726517_140734616_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
WTC11_00081703	chr7	-	3789	18	NIC	ENSG00000157764.14	novel	9807	20	NA	NA	-62	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	13.8384150141483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCCTTCTTCCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	140924991	140725142	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_140726517_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
WTC11_00081704	chr7	-	6458	18	FSM	ENSG00000157764.14	ENST00000646891.1	6458	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	9.50213962428707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTTGTGGTGGCTCA	-140923437	True	NA	NA	False	AATAAA	-18	NA	140924928	140730664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
WTC11_00081711	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014636	False	8722	-9	True	AATAAA	-13	NA	141014648	141006167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141014550
WTC11_00081712	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-141006244	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141010418_141010618_141014910
WTC11_00081717	chr7	-	7309	9	FSM	ENSG00000257093.7	ENST00000536163.6	7309	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	23.0647864720227	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTGCTGCAATCCCTT	NA	False	NA	-12	True	ATTAAA	-20	NA	141702166	141656727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141662852_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
WTC11_00081719	chr7	-	4539	7	FSM	ENSG00000159784.18	ENST00000443739.7	4343	7	-57	-139	0	139	multi-exon	FALSE	canonical	3	117	junction_1	6.72474700061067	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTACGGAGCAAGGGTTTG	-143362051	True	NA	NA	False	NA	NA	NA	143362770	143353260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362575
WTC11_00081722	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_12	63.0751186145162	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-143400254	True	NA	-6	True	NA	NA	NA	143408856	143391128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
WTC11_00081729	chr7	-	5627	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	33.1803782377477	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-143885114	True	NA	NA	False	AATAAA	-17	NA	143885298	143851374	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143885209
WTC11_00081730	chr7	-	6747	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	-993	0	993	multi-exon	FALSE	canonical	3	53	junction_8	23.0162985729678	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATCCACTTTTGTGTGA	-143900254	True	NA	NA	False	ATTAAA	-17	NA	143902176	143850381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
WTC11_00081733	chr7	-	2438	3	Fusion	ENSG00000213214.6_ENSG00000204959.4	novel	2609	2	NA	NA	-7254	0	multi-exon	FALSE	non_canonical	2	177	junction_1	250.5	108	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144294220	144186082	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_144188378_144286938_144286979_144294117
WTC11_00081734	chr7	-	2913	1	FSM	ENSG00000170356.9	ENST00000479887.1	2913	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCAGTCCCGGGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	144252957	144250044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144250000_144253000
WTC11_00081735	chr7	-	2173	5	FSM	ENSG00000170356.9	ENST00000641121.1	2173	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	20.0670750235305	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCAGTCCCGGGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	144256244	144250044	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144251611_144253532_144253589_144254433_144254697_144255508_144255733_144256180
WTC11_00081741	chr7	-	12110	14	Fusion	ENSG00000243896.4_ENSG00000204959.4	novel	4532	12	NA	NA	-7234	-4779	multi-exon	FALSE	canonical	0	0	junction_9	178.932799524185	63	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGTGTTCTGACTG	-144293864	True	NA	NA	False	GATAAA	-1	NA	144294200	144263385	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_144270871_144272444_144272516_144273959_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144294117
WTC11_00081742	chr7	-	5693	11	NNC	ENSG00000204959.4	novel	4532	12	NA	NA	-7217	-983	intron_retention	FALSE	canonical	0	0	junction_6	167.184478944668	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTGAGAGTATTAA	-144293847	True	NA	NA	False	AATAAA	-23	NA	144294183	144273427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144294117
WTC11_00081743	chr7	-	531	5	FSM	ENSG00000244479.7	ENST00000496968.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	221.876091546611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	144355520	144300470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144300537_144311590_144311705_144311883_144311940_144343186_144343299_144355337
WTC11_00081745	chr7	-	582	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	277	junction_4	182.221534128105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	-144355000	False	NA	NA	False	AATAAA	-15	NA	144355145	144307147	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144350717_144350825_144354981
WTC11_00081746	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	173.525790590333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
WTC11_00081750	chr7	-	592	3	FSM	ENSG00000244479.7	ENST00000475089.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	210.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCATGTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	144355703	144311590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144311705_144343186_144343299_144355337
WTC11_00081752	chr7	-	3714	5	NIC	ENSG00000244479.7	novel	602	4	NA	NA	0	2918	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	287.392914839597	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATAGAAAGTCTTCGGC	-144355074	False	NA	NA	False	NA	NA	NA	144355219	144333849	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354031_144354161_144354981
WTC11_00081756	chr7	-	4515	4	FSM	ENSG00000106462.12	ENST00000684400.1	4502	4	0	-13	0	9	multi-exon	FALSE	canonical	3	290	junction_3	51.4392845984467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTCATAACGTGTCA	-148816688	False	NA	-9	True	AATAAA	-27	NA	148816700	148807373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148810415_148811624_148811721_148813958
WTC11_00081758	chr7	-	2487	19	FSM	ENSG00000106462.12	ENST00000350995.6	2477	19	0	-10	0	8	multi-exon	FALSE	canonical	3	33	junction_16	76.496913517983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTCTCATAACGTGTC	-148877900	True	NA	-10	True	AATAAA	-26	NA	148884248	148807374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
WTC11_00081760	chr7	-	3649	19	FSM	ENSG00000106462.12	ENST00000492143.5	3641	19	0	-8	0	8	multi-exon	FALSE	canonical	3	64	junction_10	85.9249062040386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTCTCATAACGTGTC	-148877935	True	NA	-10	True	AATAAA	-26	NA	148884283	148807374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
WTC11_00081761	chr7	-	2662	20	FSM	ENSG00000106462.12	ENST00000320356.7	2654	20	0	-8	0	8	multi-exon	FALSE	canonical	3	12	junction_12	80.9372042075259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTCTCATAACGTGTC	-148877943	True	NA	-10	True	AATAAA	-26	NA	148884291	148807374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826453_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
WTC11_00081765	chr7	-	2707	21	FSM	ENSG00000106462.12	ENST00000683744.1	2707	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	82.6671639769988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	-148877966	True	NA	-55	True	NA	NA	NA	148884314	148807419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
WTC11_00081771	chr7	-	2789	10	FSM	ENSG00000155660.11	ENST00000652332.1	2767	10	0	-22	0	22	multi-exon	FALSE	canonical	3	3104	junction_4	414.9074863415	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCTGCTGGGAGCCT	-149028491	False	23881	5	True	AATAAA	-42	NA	149028505	149003039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149004210_149005140_149005375_149005896_149006054_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
WTC11_00081772	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	1143.39631615747	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-149028648	False	NA	-23	True	AATAAA	-14	NA	149028662	149003067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
WTC11_00081776	chr7	-	3146	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	-2	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-149088583	True	NA	NA	False	NA	NA	NA	149090782	149069640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149072474_149074385_149074539_149090622
WTC11_00081778	chr7	-	836	1	FSM	ENSG00000240877.3	ENST00000488398.3	297	1	-287	-252	-287	252	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGACAGAAAACTTAAAATG	-149125330	True	NA	NA	False	NA	NA	NA	149126273	149125437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149125400_149126300
WTC11_00081779	chr7	-	7412	7	NNC	ENSG00000196453.8	novel	3172	6	NA	NA	-3437	29775	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.9689654290716	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAAGGTTTCTGTCCCC	NA	False	NA	NA	False	NA	NA	NA	149464499	149401587	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_149401614_149431370_149432933_149436574_149436827_149450998_149451113_149454110_149454238_149455176_149456038_149460029
WTC11_00081783	chr7	-	3861	7	FSM	ENSG00000181220.18	ENST00000458143.7	3846	7	2	-17	2	16	multi-exon	FALSE	canonical	3	57	junction_1	34.9702254305955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAGGCATGTGTCTT	-149496274	True	NA	14	True	AATAAA	-34	NA	149497807	149472776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
WTC11_00081784	chr7	-	3868	7	FSM	ENSG00000181220.18	ENST00000644635.1	3949	7	-16	97	-16	0	multi-exon	FALSE	canonical	3	77	junction_1	28.7831933986176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGTTGGGTTCCATT	NA	False	NA	-2	True	AATAAA	-18	NA	149497833	149472792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
WTC11_00081785	chr7	-	3815	7	FSM	ENSG00000181220.18	ENST00000340622.8	3799	7	0	-16	0	16	multi-exon	FALSE	canonical	3	77	junction_1	31.4081553457414	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAGGCATGTGTCTT	-149496276	True	NA	14	True	AATAAA	-34	NA	149497809	149472776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
WTC11_00081787	chr7	-	3508	8	FSM	ENSG00000133624.14	ENST00000463567.5	3520	8	0	12	0	-7	multi-exon	FALSE	canonical	1	1	junction_6	8.76449237153027	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAACTTGCTGTGTGAG	-149623814	True	NA	-12	True	AATAAA	-8	NA	149624727	149547165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149549375_149550867_149550947_149551654_149551827_149552800_149553017_149558607_149558840_149619923_149620038_149621259_149621560_149624541
WTC11_00081791	chr7	-	1157	8	FSM	ENSG00000106526.11	ENST00000683684.1	1157	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.6409614267233	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTTTGTTTTTCTCA	-150323455	True	NA	NA	False	AATAAA	-16	NA	150323545	150247211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150247570_150248947_150249055_150284752_150284846_150286366_150286541_150289449_150289594_150293311_150293420_150295251_150295348_150323468
WTC11_00081792	chr7	-	512	5	FSM	ENSG00000106526.11	ENST00000477871.1	678	5	166	0	14	0	multi-exon	FALSE	canonical	1	3	junction_4	37.9893077062481	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAGTACACGGGTATC	-150323469	True	NA	NA	False	NA	NA	NA	150323559	150286467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150286541_150289449_150289594_150293311_150293420_150295251_150295348_150323468
WTC11_00081794	chr7	-	700	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	-15	0	3	multi-exon	FALSE	canonical	3	1941	junction_5	117.264828486635	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTGCACGACTTCCT	-150315856	True	NA	0	True	AATAAA	-28	NA	150341629	150338313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
WTC11_00081795	chr7	-	606	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	-23	0	3	multi-exon	FALSE	canonical	3	35	junction_1	895.027792864557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTGCACGACTTCCT	-150315889	True	NA	0	True	AATAAA	-28	NA	150341662	150338313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
WTC11_00081796	chr7	-	1658	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	-19	-21	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	115.371952830833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-150315889	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
WTC11_00081799	chr7	-	1048	6	FSM	ENSG00000106565.18	ENST00000429904.6	1206	6	158	0	158	0	multi-exon	FALSE	canonical	1	2	junction_4	0.894427190999916	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	NA	False	NA	-11	True	AATAAA	-16	NA	150796574	150791300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365
WTC11_00081804	chr7	-	3659	9	FSM	ENSG00000055118.17	ENST00000532957.5	3374	9	-181	-104	4	104	multi-exon	FALSE	canonical	3	32	junction_5	5.02493781056044	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGTAGTCCTGCTGGC	-150977988	True	NA	NA	False	NA	NA	NA	150978317	150949310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150957290_150957503_150958058_150958503_150959571_150959737_150974710_150974942_150977837
WTC11_00081807	chr7	-	1079	11	NNC	ENSG00000164885.13	novel	783	11	NA	NA	-50	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	18	junction_6	49.3027382606686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGATGTGGTGGTCAAG	-151057936	False	NA	-5	True	CATAAA	-21	NA	151057947	151053811	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151054096_151054211_151054293_151054404_151054465_151055025_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
WTC11_00081808	chr7	-	1125	12	NNC	ENSG00000164885.13	novel	1122	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	148	junction_7	12.6713055156552	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGATGTGGTGGTCAAG	-151055184	True	NA	-5	True	CATAAA	-21	NA	151057897	151053811	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151054096_151054211_151054293_151054404_151054465_151055025_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
WTC11_00081809	chr7	-	1125	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_3	52.1518761102435	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGATGTGGTGGTCAAG	-151055184	True	NA	-5	True	CATAAA	-21	NA	151057897	151053811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
WTC11_00081811	chr7	-	1775	8	NIC	ENSG00000164896.21	novel	1826	9	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	179.184205754404	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATCTCAGTTTTGGGA	-151071340	False	9450	31	True	ATTAAA	-19	NA	151080790	151076620	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_151076833_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080436
WTC11_00081815	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	138.739357699969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071392	False	9450	26	True	ATTAAA	-14	NA	151080842	151076625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
WTC11_00081816	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	130.256157883866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071412	False	9450	26	True	ATTAAA	-14	NA	151080862	151076625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
WTC11_00081818	chr7	-	1843	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	-17	0	0	multi-exon	FALSE	canonical	3	324	junction_8	59.8560773856757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGTTGTGAATCTCAG	-151071340	False	9450	23	True	ATTAAA	-11	NA	151080790	151076628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
WTC11_00081820	chr7	-	1133	5	NIC	ENSG00000164896.21	novel	1402	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	34	junction_3	208.474668725004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCGTTGTGAATCTCA	-151069599	False	NA	22	True	ATTAAA	-10	NA	151079049	151076629	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_151076833_151077100_151077237_151077309_151077402_151077878_151078093_151078561
WTC11_00081826	chr7	-	2163	2	FSM	ENSG00000164897.14	ENST00000462940.1	1549	2	-613	-1	-28	0	multi-exon	FALSE	canonical	3	480	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCAGTGTGTCTGAGT	-151074071	True	NA	-7	True	ATTAAA	-19	NA	151083521	151081084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151081901_151082174
WTC11_00081831	chr7	-	4794	15	NIC	ENSG00000033050.9	novel	4527	15	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	79.4092987923573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	-151222284	True	NA	-2	True	AATACA	-15	NA	151227166	151211483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151226856
WTC11_00081833	chr7	-	1031	6	FSM	ENSG00000033050.9	ENST00000468073.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	14.8593404968054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTGTCTGTACCAATA	-151226598	False	NA	NA	False	NA	NA	NA	151226626	151221635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304
WTC11_00081840	chr7	-	5797	2	ISM	ENSG00000187260.16	ENST00000469830.2	1691	6	22578	-2	8864	-2	intron_retention	FALSE	canonical	3	76	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTCCTGTGTCCTCTT	NA	False	NA	-6	True	AATATA	-16	NA	151387053	151381125	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_151381747_151381877
WTC11_00081843	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	2151	junction_6	110.51105771619	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	-151519883	False	NA	-3	True	AATAAA	-19	NA	151519895	151466011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
WTC11_00081845	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	798.113208685053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
WTC11_00081848	chr7	-	2402	12	ISM	ENSG00000106617.15	ENST00000492843.6	2696	14	103787	50	-174	0	3prime_fragment	FALSE	canonical	3	67	junction_11	30.1283754667334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATGAGGATAGTTT	-151632516	False	NA	-37	True	NA	NA	NA	151632527	151556210	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595452_151632068
WTC11_00081854	chr7	-	11543	25	FSM	ENSG00000055609.21	ENST00000680877.1	11540	25	0	-3	0	0	multi-exon	FALSE	canonical	3	8	junction_24	20.7109320971639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCCTAGAGCTTCTGT	-152182580	False	NA	-7	True	AATAAA	-18	NA	152182594	152134924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152136925_152138795_152138905_152139185_152139260_152139674_152139792_152144712_152144882_152145152_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156347_152157760_152157926_152158862_152159073_152162116_152163827_152167145_152167379_152169185_152169250_152171263_152171343_152174130_152174243_152176190_152178011_152179833_152180127_152180710
WTC11_00081865	chr7	-	3879	21	NNC	ENSG00000157212.19	novel	3990	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	80	junction_1	31.3639920928443	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-155003089	False	NA	-6	True	AATAAA	-20	NA	155003136	154943686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_154944161_154946360_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00081866	chr7	-	4370	22	NNC	ENSG00000157212.19	novel	3990	22	NA	NA	0	492	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_18	47.3269613417265	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATCTTTGAGTAGATGTA	-155001281	True	NA	NA	False	AATAAA	-13	NA	155002972	154943194	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_154944161_154946360_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986016_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00081868	chr7	-	1780	2	Genic_Genomic	ENSG00000273117.1	novel	1624	1	NA	NA	-136	21923	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGACTTTGGGCATTCT	-155297655	False	NA	NA	False	AAAAAG	-40	NA	155297677	155273994	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_155274015_155295917
WTC11_00081870	chr7	-	2982	3	NIC	ENSG00000216895.9	novel	1356	3	NA	NA	187	1540	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	13	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATGCCTGTTTTTG	-155644140	False	NA	-4	True	AATAAA	-13	NA	155644190	155640375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_155642971_155643467_155643605_155643940
WTC11_00081871	chr7	-	2927	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	-29	-1542	0	1542	multi-exon	FALSE	canonical	3	37	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGCCTGTTTTTGTA	-155643926	True	NA	-2	True	AATAAA	-15	NA	155644406	155640373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_155642971_155643467_155643605_155644213
WTC11_00081873	chr7	-	2353	1	FSM	ENSG00000182648.14	ENST00000689604.1	2212	1	3	-144	3	141	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTTACACTAGGAACATT	-156639930	True	NA	NA	False	NA	NA	NA	156640574	156638221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156638200_156640600
WTC11_00081874	chr7	-	5575	19	NIC	ENSG00000105983.23	novel	2922	19	NA	NA	0	-326	intron_retention	FALSE	canonical	0	0	junction_1	101.033486686835	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTCTAGTGCCAGCAG	-156887837	True	NA	NA	False	NA	NA	NA	156893182	156676576	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_156676625_156679076_156679307_156680442_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
WTC11_00081876	chr7	-	3628	13	FSM	ENSG00000105983.23	ENST00000448926.5	3629	13	1	0	1	0	multi-exon	FALSE	canonical	3	12	junction_1	106.757090578982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTCAGATTATAACATT	NA	False	NA	NA	False	AATAAA	-17	NA	156796492	156681519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156684164_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156779654_156779733_156796388
WTC11_00081877	chr7	-	4294	18	NIC	ENSG00000105983.23	novel	2922	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	97.3374610048921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTCAGATTATAACATT	-156887833	True	NA	NA	False	AATAAA	-17	NA	156893178	156681519	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156779654_156779733_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
WTC11_00081878	chr7	-	3457	18	FSM	ENSG00000105983.23	ENST00000415428.5	3457	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	104.123861562626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGCTCAACTTTTTG	-156887642	False	NA	-7	True	AGTAAA	-16	NA	156892987	156682210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156736492_156736616_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
WTC11_00081884	chr7	-	315	1	FSM	ENSG00000130675.15	ENST00000605400.1	1753	1	1081	357	865	-357	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGTGGTTTAATTAAAG	-157008185	False	NA	NA	False	NA	NA	NA	157008210	157007895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_157007900_157008200
WTC11_00081885	chr7	-	1366	7	FSM	ENSG00000155093.19	ENST00000404321.3	1374	7	4	4	4	-4	multi-exon	FALSE	canonical	2	6	junction_1	1.88561808316413	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTACGGGGCCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	158205273	158110828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158110916_158133676_158134060_158136654_158136696_158138293_158138516_158166930_158167292_158192326_158192496_158205170
WTC11_00081889	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_28	156.934325923493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693610	True	NA	-4	True	AATAAA	-12	NA	158704804	158631313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
WTC11_00081892	chr7	-	5253	28	FSM	ENSG00000146918.20	ENST00000409339.3	5253	28	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	130.22042092042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTGTTTTGTTTTTGT	-158693604	True	NA	-8	True	ATTAAA	-21	NA	158704798	158639795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158641555_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
WTC11_00081893	chr7	-	5902	23	FSM	ENSG00000117868.18	ENST00000275418.13	5902	23	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_10	36.8685401961936	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGATTTGTTTTTCTCT	-158826582	True	NA	-6	True	AATAAA	-18	NA	158829509	158730996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158734253_158734421_158734472_158735502_158735609_158737047_158737180_158739022_158739122_158741522_158741897_158743528_158743679_158748193_158748281_158749648_158749724_158752780_158752844_158759485_158759582_158760057_158760148_158761495_158761545_158763082_158763166_158764676_158764854_158767653_158767775_158773340_158773397_158788003_158788094_158788344_158788418_158793649_158793727_158797941_158798077_158799030_158799073_158829088
WTC11_00081895	chr7	-	3857	13	FSM	ENSG00000106018.14	ENST00000262178.7	3854	13	0	-3	0	3	multi-exon	FALSE	canonical	3	26	junction_7	8.71261856287891	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAAGAACTTGCTCTGA	-159144028	True	NA	4	True	AATAAA	-23	NA	159144867	159028171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144720
WTC11_00081896	chr7	+	4308	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCACCTTACAGAGAAATG	NA	False	NA	NA	False	NA	NA	NA	2721819	2726127	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_2721800_2726100
WTC11_00081897	chr7	+	2320	1	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGATTTATCTATTCTG	NA	False	NA	NA	False	NA	NA	NA	3319882	3322202	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_3319900_3322200
WTC11_00081898	chr7	+	296	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTGTTTCTAATAT	NA	False	NA	NA	False	NA	NA	NA	14054996	14055292	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_14055000_14055300
WTC11_00081899	chr7	+	312	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGGGCAGTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	14143334	14143646	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_14143300_14143600
WTC11_00081901	chr7	+	679	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24545718	24546397	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24545700_24546400
WTC11_00081902	chr7	+	254	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCATTTTTAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	25355117	25355371	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_25355100_25355400
WTC11_00081904	chr7	+	1464	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCCCAGTATGTGATG	NA	False	NA	NA	False	NA	NA	NA	36252829	36254293	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_36252800_36254300
WTC11_00081905	chr7	+	280	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAACGACACAAATGTT	NA	False	NA	NA	False	NA	NA	NA	39520167	39520447	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_39520200_39520400
WTC11_00081906	chr7	+	312	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGGCCAGTTCTAAAT	44856432	False	NA	NA	False	NA	NA	NA	44856675	44856987	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_44856700_44857000
WTC11_00081907	chr7	+	633	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTGCTATTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	46326560	46327193	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_46326600_46327200
WTC11_00081909	chr7	+	789	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTTCCTAGGGGACAA	51870171	False	NA	NA	False	NA	NA	NA	51870257	51871046	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51870300_51871000
WTC11_00081910	chr7	+	1028	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTTTCCTTTCCATAT	51870977	False	NA	NA	False	AATAAA	-14	NA	51871063	51872091	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51871100_51872100
WTC11_00081911	chr7	+	442	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAATCCCGTCTCTACT	66156527	False	NA	NA	False	NA	NA	NA	66156537	66156979	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_66156500_66157000
WTC11_00081912	chr7	+	256	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTTGCTGACATTTCTA	NA	False	NA	NA	False	NA	NA	NA	72541329	72541585	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_72541300_72541600
WTC11_00081913	chr7	+	313	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGACATTGTTACAA	NA	False	NA	NA	False	NA	NA	NA	72652093	72652406	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_72652100_72652400
WTC11_00081914	chr7	+	1361	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCCTAAATGCTTCTGC	NA	False	NA	NA	False	AGTAAA	-12	NA	72993285	72994646	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_72993300_72994600
WTC11_00081915	chr7	+	307	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTTGCAGGGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	80667739	80668046	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_80667700_80668000
WTC11_00081916	chr7	+	280	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	82001763	82002043	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_82001800_82002000
WTC11_00081918	chr7	+	1286	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTACCAAAACTTTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	91867794	91869080	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_91867800_91869100
WTC11_00081922	chr7	+	314	1	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGAAGAATCGCTGCT	104670256	False	NA	NA	False	NA	NA	NA	104670268	104670582	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_104670300_104670600
WTC11_00081923	chr7	+	227	1	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATACAAGGAAAAAATAC	104671351	False	NA	NA	False	AATAAA	-37	NA	104671363	104671590	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_104671400_104671600
WTC11_00081924	chr7	+	3303	1	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACCAGGTGTCACTA	NA	False	NA	NA	False	NA	NA	NA	111462179	111465482	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_111462200_111465500
WTC11_00081925	chr7	+	322	1	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCAGAAATCTATCTGA	NA	False	NA	NA	False	NA	NA	NA	121317522	121317844	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121317500_121317800
WTC11_00081926	chr7	+	252	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAACACATGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	121318743	121318995	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121318700_121319000
WTC11_00081928	chr7	+	235	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTCATAAAAACACAGGT	125913116	False	NA	NA	False	NA	NA	NA	125913192	125913427	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_125913200_125913400
WTC11_00081930	chr7	+	2388	1	FSM	ENSG00000288884.1	ENST00000690978.1	2385	1	-2	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTTGGGTACGTCTT	128661077	False	NA	9	True	ATTAAA	-21	NA	128661092	128663480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128661100_128663500
WTC11_00081931	chr7	+	327	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATCAGTGTCTCAATG	NA	False	NA	NA	False	AATAAA	-36	NA	138991110	138991437	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_138991100_138991400
WTC11_00081932	chr7	+	1673	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139021497	139023170	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_139021500_139023200
WTC11_00081935	chr7	+	413	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACCAGACGATCTAAA	143609960	False	NA	NA	False	AAGAAA	-36	NA	143609970	143610383	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_143610000_143610400
WTC11_00081936	chr7	+	3252	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCAGTGAGCCGAGA	NA	False	NA	NA	False	NA	NA	NA	144325121	144328373	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_144325100_144328400
WTC11_00081941	chr7	+	554	2	FSM	ENSG00000177706.9	ENST00000471328.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCATGTGAGCAAGCTT	195613	False	NA	NA	False	NA	NA	NA	195624	197575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_195733_197129
WTC11_00081943	chr7	+	743	3	FSM	ENSG00000223855.3	ENST00000663680.2	754	3	0	11	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522415	True	NA	11	True	AATAAA	-19	NA	522541	525233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_522704_524079_524281_524853
WTC11_00081947	chr7	+	4009	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	121.883055526093	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806876	True	NA	6	True	AATAAA	-19	NA	816610	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081948	chr7	+	4399	23	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_8	160.643289710232	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806876	True	NA	6	True	AATAAA	-19	NA	816610	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081950	chr7	+	3894	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_6	110.706443654679	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806895	True	NA	9	True	AATAAA	-22	NA	816629	874902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081951	chr7	+	3994	20	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	150.084740606368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806908	True	NA	9	True	AATAAA	-22	NA	816642	874902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081952	chr7	+	3779	18	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	132.037925766919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806910	True	NA	9	True	AATAAA	-22	NA	816644	874902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081953	chr7	+	4174	21	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_6	166.150616911283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATGGGATATAAACAG	806919	True	NA	5	True	AATAAA	-18	NA	816653	874898	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081954	chr7	+	4264	22	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_7	160.584024812381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806920	True	NA	9	True	AATAAA	-22	NA	816654	874902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081955	chr7	+	4021	20	NNC	ENSG00000164828.18	novel	3868	18	NA	NA	6101	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	172.718286953639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	813232	False	NA	6	True	AATAAA	-19	NA	822966	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_823062_832019_832102_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081957	chr7	+	3946	19	NIC	ENSG00000164828.18	novel	4010	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	127.780627987535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	NA	False	NA	9	True	AATAAA	-22	NA	832504	874902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081958	chr7	+	478	2	FSM	ENSG00000164828.18	ENST00000483996.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	NA	False	NA	13	True	AATAAA	-21	NA	832506	839180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797
WTC11_00081959	chr7	+	4743	11	NIC	ENSG00000164828.18	novel	3701	17	NA	NA	-84	0	intron_retention	FALSE	canonical	3	419	junction_2	36.8130411674993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	851069	False	NA	6	True	AATAAA	-19	NA	851082	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00081961	chr7	+	1939	4	FSM	ENSG00000229043.3	ENST00000662926.1	1939	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	26.5873821368124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	1159574	True	NA	-19	True	NA	NA	NA	1160431	1165607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1162961_1163218_1163451_1163496_1164160
WTC11_00081963	chr7	+	592	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	-11	7	-4	-7	multi-exon	FALSE	canonical	2	5	junction_3	6.59966329107444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAATACTTGCAGTAGT	1569652	True	NA	NA	False	AATAAA	-13	NA	1570130	1579478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
WTC11_00081965	chr7	+	2681	5	FSM	ENSG00000230487.9	ENST00000437964.5	2666	5	-15	0	4	0	multi-exon	TRUE	canonical	0	0	junction_4	7.82224392358101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCGCAGTCTGCGCCCGG	1569641	True	NA	NA	False	AATGAA	-14	NA	1570119	1586545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1583161_1583270_1584383
WTC11_00081967	chr7	+	785	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	-2	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	514.536927732111	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234714	True	NA	15	True	AATAAA	-15	NA	2242258	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
WTC11_00081968	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	391.033957036413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
WTC11_00081969	chr7	+	737	3	FSM	ENSG00000106268.16	ENST00000397049.2	714	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	1049	junction_2	44	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2236908	False	NA	15	True	AATAAA	-15	NA	2244452	2251145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2244727_2249856_2250003_2250828
WTC11_00081970	chr7	+	1074	8	FSM	ENSG00000106263.19	ENST00000431643.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	818.647291423542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATTTTTAAGTAAGTG	2353805	True	NA	NA	False	NA	NA	NA	2354085	2366435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2354196_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316
WTC11_00081973	chr7	+	10593	45	FSM	ENSG00000146555.20	ENST00000404826.7	10593	45	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_10	6.26164204957652	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGATTTTCTTCAAG	3300341	True	NA	9	True	AATAAA	-22	NA	3301251	4269000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3301885_3619079_3619240_3639003_3639111_3641957_3642106_3821449_3821584_3950922_3951035_3951729_3951921_3958930_3959015_3962656_3962852_3967317_3967435_3969256_3969425_3971465_3971569_3974368_3974546_3987185_3987323_4010965_4011114_4012094_4012236_4017170_4017353_4049347_4049464_4051637_4051831_4067837_4067937_4076997_4077190_4079462_4079585_4110662_4110773_4113288_4113440_4114036_4114275_4127380_4127497_4129907_4130098_4132324_4132424_4145721_4145917_4149261_4149464_4158447_4158552_4161785_4161857_4174221_4174358_4175774_4175835_4178484_4178587_4205878_4205995_4208098_4208286_4210024_4210163_4220108_4220271_4221238_4221365_4233254_4233420_4237646_4237785_4241792_4241914_4245675_4245806_4265123
WTC11_00081975	chr7	+	554	1	FSM	ENSG00000286874.1	ENST00000667321.1	323	1	-369	138	-369	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGTTTTCTAAACATTGG	4641845	False	NA	NA	False	NA	NA	NA	4641878	4642432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4641900_4642400
WTC11_00081977	chr7	+	5757	17	FSM	ENSG00000242802.9	ENST00000648925.1	5743	17	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	31.551545128567	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTGGGTCCACACTGC	4772320	True	NA	15	True	AATAAA	-15	NA	4775637	4794395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790213_4790592_4790672_4790888_4791114
WTC11_00081978	chr7	+	6371	6	NNC	ENSG00000146587.18	novel	6612	5	NA	NA	18	-317	intron_retention	FALSE	canonical	3	9	junction_1	24.7951608181919	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAACATTTGTGTCGCT	5044189	True	NA	20	True	CATAAA	-20	NA	5045877	5069170	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_5046397_5046753_5046848_5048032_5048092_5057294_5057422_5057683_5057780_5063694
WTC11_00081979	chr7	+	1244	7	NIC	ENSG00000272968.5	novel	766	6	NA	NA	12	-9	intron_retention	FALSE	canonical	0	0	junction_5	25.2894356511875	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCTAGAGGTGCTGTT	5044234	True	NA	-6	True	AATAAA	-7	NA	5045922	5073212	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694_5063756_5072361_5072498_5072921
WTC11_00081980	chr7	+	848	3	FSM	ENSG00000273313.1	ENST00000498308.1	514	3	-345	11	-345	-11	multi-exon	FALSE	canonical	2	5	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCTAGAGGTGCTGTT	5071767	False	NA	-6	True	AATAAA	-7	NA	5071779	5073212	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5072201_5072361_5072498_5072921
WTC11_00081981	chr7	+	2398	11	NIC	ENSG00000164638.11	novel	5714	11	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	20.1049745088125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	5282344	True	NA	28	True	ATTAAA	-22	NA	5282987	5304060	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5303215
WTC11_00081982	chr7	+	680	1	FSM	ENSG00000272953.1	ENST00000609130.1	632	1	-52	4	-52	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGCCAATGGCGTTT	5425635	True	NA	0	True	AATAAA	-19	NA	5425717	5426397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5425700_5426400
WTC11_00081985	chr7	+	4804	10	ISM	ENSG00000187953.10	ENST00000486256.5	3327	14	19656	-5	3	5	intron_retention	TRUE	canonical	2	9	junction_2	36.6999848622433	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTAATTTGTTTGCG	6729019	True	NA	NA	False	AATAAA	-25	NA	6729783	6753867	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_6730302_6730633_6730728_6731896_6731956_6733398_6733528_6735304_6735390_6737075_6737937_6741684_6741853_6746087_6746189_6747035_6747206_6751248
WTC11_00081986	chr7	+	211	2	FSM	ENSG00000169402.15	ENST00000493745.1	574	2	363	0	363	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATTTGCTCCTGGACAT	NA	False	NA	NA	False	NA	NA	NA	6771545	6773414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6771692_6773349
WTC11_00081987	chr7	+	4722	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	-5	189	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	63.3909299505852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGAAGTCATTGTATC	7566326	False	NA	NA	False	AATAAA	-3	NA	7567047	7609121	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00081988	chr7	+	3223	12	NNC	ENSG00000164654.16	novel	4877	13	NA	NA	-6	303	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	98.7686168244827	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATTTCTTTCAGATTAA	7566325	True	NA	51	True	NA	NA	NA	7567046	7607526	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585638_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00081989	chr7	+	3056	13	NIC	ENSG00000164654.16	novel	3232	8	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	86.1388978465723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7567205	False	NA	16	True	AATAAA	-14	NA	7567407	7607223	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567485_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00081991	chr7	+	2181	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	-24	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	60.4777277644883	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	7637955	True	NA	-4	True	AATAAA	-8	NA	7640751	7879185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
WTC11_00081992	chr7	+	4761	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	23	junction_3	24.2411355563477	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	NA	False	NA	14	True	AATAAA	-20	NA	7968775	8089080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
WTC11_00081993	chr7	+	429	2	FSM	ENSG00000244239.1	ENST00000458624.1	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	8262085	False	NA	8	True	AATAAA	-19	NA	8262232	8262821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8262420_8262579
WTC11_00081994	chr7	+	543	2	FSM	ENSG00000272328.1	ENST00000606016.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCTTTTGTACTCCCAA	NA	False	NA	NA	False	NA	NA	NA	8303753	8340523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8304156_8340382
WTC11_00081995	chr7	+	1953	1	FSM	ENSG00000122584.13	ENST00000602349.2	1953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTACTTGTGTAAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	8751006	8752959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8751000_8753000
WTC11_00081996	chr7	+	352	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGATGGCTTAGCTTGG	NA	False	NA	NA	False	NA	NA	NA	9353467	9353819	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9353500_9353800
WTC11_00081997	chr7	+	753	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGCATGCTGTGG	NA	False	NA	NA	False	TTTAAA	-40	NA	9355386	9356139	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9355400_9356100
WTC11_00081998	chr7	+	323	2	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGATAACAGGCTTTA	NA	False	NA	NA	False	TTTAAA	-18	NA	9355794	9461254	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9356060_9461196
WTC11_00082000	chr7	+	471	3	FSM	ENSG00000106443.17	ENST00000489305.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	84.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATATATTAGTGTT	NA	False	NA	NA	False	AATAAA	-10	NA	11061815	11062993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11061842_11061963_11062086_11062670
WTC11_00082002	chr7	+	264	1	FSM	ENSG00000236048.2	ENST00000420252.1	1194	1	85	845	85	-845	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTACTGATGCAACTCT	NA	False	NA	NA	False	ATTAAA	-36	NA	12471436	12471700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12471400_12471700
WTC11_00082003	chr7	+	5817	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	-18	3883	-17	2697	multi-exon	FALSE	canonical	1	1	junction_4	3.88501394248892	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACAAGCCCTTCTGCTG	12570657	True	NA	NA	False	NA	NA	NA	12570701	12656299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
WTC11_00082004	chr7	+	1134	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	-103	265	-103	0	multi-exon	FALSE	canonical	1	9	junction_1	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	NA	False	NA	NA	False	NA	NA	NA	12686752	12688914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12687634_12687729_12688165
WTC11_00082005	chr7	+	4145	12	NIC	ENSG00000048052.24	novel	4239	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	17.3952591622636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGAAGGTGATCTCTT	18494581	True	NA	NA	False	GATAAA	-39	NA	18495736	18668731	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18495855_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082007	chr7	+	4272	11	NIC	ENSG00000048052.24	novel	4407	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	23.3154455243729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18494597	True	NA	7	True	AATAAA	-16	NA	18495752	18668843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591637_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082008	chr7	+	4373	12	NIC	ENSG00000048052.24	novel	4407	13	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	25.1405963886472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGATCCCCTTTC	18494608	False	NA	-4	True	AATAAA	-5	NA	18495763	18668832	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18496024_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591637_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082009	chr7	+	4242	11	NIC	ENSG00000048052.24	novel	4239	12	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	20.3914197642047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18494624	False	NA	7	True	AATAAA	-16	NA	18495779	18668843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18496024_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082010	chr7	+	859	5	Fusion	ENSG00000228598.1_ENSG00000267055.1	novel	639	4	NA	NA	-20875	11	multi-exon	FALSE	canonical	2	18	junction_2	18.8729303501073	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAGAAAAATATGTGTT	20121007	False	NA	16	True	AATAAA	-27	NA	20121040	20153542	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153263
WTC11_00082011	chr7	+	461	1	FSM	ENSG00000219451.3	ENST00000405810.2	428	1	-4	-29	-4	29	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAATTTTAAACC	NA	False	NA	NA	False	AAAACA	-5	NA	20827321	20827782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20827300_20827800
WTC11_00082013	chr7	+	1197	3	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTTGCTATTCTTT	NA	False	NA	7	True	AATAAA	-21	NA	21069753	21078943	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_21069872_21077709_21077839_21077993
WTC11_00082017	chr7	+	630	2	Antisense	novelGene_ENSG00000105889.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTGTTTAGTGGTC	22703486	True	NA	12	True	AATAAA	-17	NA	22703680	22709272	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_22703935_22708896
WTC11_00082018	chr7	+	1921	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	17	0	-10	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854142	22860274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
WTC11_00082019	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_1	54.3588896951445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	23181830	False	NA	-41	True	AAAAAG	-44	NA	23181840	23200955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
WTC11_00082022	chr7	+	2268	1	FSM	ENSG00000226816.3	ENST00000413042.3	2259	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	23205777	23208045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23205800_23208000
WTC11_00082024	chr7	+	658	2	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCTACTTCTAAAGCA	23471391	False	NA	NA	False	ATTAAA	-15	NA	23471407	23472894	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_23471501_23472329
WTC11_00082026	chr7	+	12470	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATATTAGAAATGCTA	24389137	False	NA	NA	False	NA	NA	NA	24396603	24409073	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24396600_24409100
WTC11_00082027	chr7	+	8603	13	NNC	ENSG00000105926.16	novel	3848	13	NA	NA	0	239	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	101.313457480567	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTTAACTTTTA	24572060	False	NA	NA	False	NA	NA	NA	24573414	24694432	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437_24691425_24691446
WTC11_00082028	chr7	+	8600	13	NNC	ENSG00000105926.16	novel	3848	13	NA	NA	0	239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	83.9384695277837	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTTAACTTTTA	24572060	False	NA	NA	False	NA	NA	NA	24573414	24694432	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437_24691425_24691446
WTC11_00082029	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	35.8873351817362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	24573071	True	NA	NA	False	AATAAA	-18	NA	24573451	24694193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
WTC11_00082030	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	35	True	AATAAA	-45	NA	26184059	26186317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26184100_26186300
WTC11_00082031	chr7	+	2576	6	NIC	ENSG00000122565.19	novel	2061	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	1618.21180319512	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26168211	True	NA	32	True	AATAAA	-24	NA	26201761	26213356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_26202610_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
WTC11_00082033	chr7	+	796	2	FSM	ENSG00000214870.10	ENST00000449537.1	727	2	-2	-67	-2	-24	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATTAAATCTTTTTTT	26398589	False	NA	NA	False	AATAAA	-5	NA	26398610	26399630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26399022_26399245
WTC11_00082035	chr7	+	578	7	FSM	ENSG00000106069.24	ENST00000439384.5	578	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	5.52016505389306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGGGTGAGAAGAGGT	29146077	True	NA	NA	False	NA	NA	NA	29146568	29400590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29146746_29146848_29146961_29354624_29354664_29367931_29367988_29393678_29393711_29398372_29398487_29400542
WTC11_00082036	chr7	+	373	1	FSM	ENSG00000237065.2	ENST00000427230.2	913	1	48	492	48	-492	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCTAGAACCAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	29212349	29212722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29212300_29212700
WTC11_00082037	chr7	+	853	2	FSM	ENSG00000106069.24	ENST00000491856.1	2578	2	1725	0	1725	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTAGGTCAGCCCCCTC	NA	False	NA	NA	False	NA	NA	NA	29398372	29401281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29398487_29400542
WTC11_00082038	chr7	+	1647	2	NNC	ENSG00000176532.4	novel	1652	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	29563341	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_29564378_29566189
WTC11_00082039	chr7	+	4798	1	Genic_Genomic	ENSG00000227855.4	novel	NA	NA	NA	NA	-4539	-37407	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAGTAAGCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	29645687	29650485	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_29645700_29650500
WTC11_00082040	chr7	+	709	5	NNC	ENSG00000122574.12	novel	3491	8	NA	NA	55	-25807	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	2.8613807855649	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTAGGATATTTTGAGA	29806089	False	NA	NA	False	AATAAA	-18	NA	29806562	29880368	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29880187
WTC11_00082042	chr7	+	2029	13	NIC	ENSG00000106086.20	novel	2140	14	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	18	junction_12	66.7251306147508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTTGTGGCCTGTGA	30025695	True	NA	21	True	AATAAA	-18	NA	30028411	30118347	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30117969
WTC11_00082044	chr7	+	3229	16	FSM	ENSG00000106105.15	ENST00000675587.1	3217	16	-12	0	0	0	multi-exon	FALSE	canonical	3	1144	junction_2	97.7465202563356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAACTTGTGATCTAT	30568313	True	NA	11	True	ATTAAA	-14	NA	30594893	30634025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
WTC11_00082048	chr7	+	6541	15	NIC	ENSG00000078549.15	novel	6639	16	NA	NA	76	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	12.0129606879318	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGGCTGTAACTTGG	31051756	True	NA	9	True	AATAAA	-15	NA	31052383	31111473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_31052679_31063193_31063316_31064830_31064937_31077990_31078099_31081712_31081755_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31103236_31103367_31104867_31104910_31106495
WTC11_00082049	chr7	+	2401	16	NNC	ENSG00000105778.20	novel	6987	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	33.442089248929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGAATTTTGAGTTCTG	32488277	True	NA	4	True	ATTAAA	-17	NA	32495526	32584166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570167_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
WTC11_00082050	chr7	+	2273	7	NIC	ENSG00000122507.21	novel	549	5	NA	NA	26	1186	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	119.853614417292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCTGTTATTTTTT	33348573	True	NA	3	True	CATAAA	-18	NA	33351952	33391834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33390236
WTC11_00082051	chr7	+	1527	11	NIC	ENSG00000122507.21	novel	549	5	NA	NA	26	95	combination_of_known_splicesites	FALSE	canonical	2	26	junction_9	123.845104868945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTGGCTATACCTTTC	33348573	True	NA	8	True	AATAAA	-18	NA	33351952	33877275	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33860594_33860706_33877051
WTC11_00082052	chr7	+	1590	9	NNC	ENSG00000122507.21	novel	549	5	NA	NA	35	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	126.811314065426	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTCAAATAATATCTTG	33348582	True	NA	NA	False	AATAAA	-7	NA	33351961	33605619	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605197
WTC11_00082053	chr7	+	2095	5	NIC	ENSG00000122507.21	novel	549	5	NA	NA	48	1186	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	168.168813993558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCTGTTATTTTTT	33348595	True	NA	3	True	CATAAA	-18	NA	33351974	33391834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33367766_33367863_33383665_33383839_33387991_33388145_33390236
WTC11_00082054	chr7	+	2201	6	NIC	ENSG00000122507.21	novel	549	5	NA	NA	66	1169	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	149.555875845785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTACCAATTTATCA	33348613	True	NA	-14	True	CATAAA	-1	NA	33351992	33391817	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33390236
WTC11_00082055	chr7	+	1097	1	FSM	ENSG00000238090.1	ENST00000423599.1	923	1	-31	-143	-31	143	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAAGAAAATACCAAAGA	NA	False	NA	NA	False	NA	NA	NA	33379932	33381029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33379900_33381000
WTC11_00082056	chr7	+	576	1	NIC	ENSG00000122507.21	novel	1349	7	NA	NA	113468	-448	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACTCTGCTTGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	33651650	33652226	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33651600_33652200
WTC11_00082057	chr7	+	397	2	NNC	ENSG00000236212.2	novel	1600	2	NA	NA	-34315	-1219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGGAGGCTCCTCCCA	34174843	True	NA	NA	False	NA	NA	NA	34175149	34297793	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_34175332_34297578
WTC11_00082060	chr7	+	568	1	FSM	ENSG00000231916.1	ENST00000440505.1	426	1	155	-297	155	297	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTACACTCATAAGAATA	38311516	False	NA	NA	False	AATAAA	-13	NA	38311537	38312105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38311500_38312100
WTC11_00082061	chr7	+	4543	11	NIC	ENSG00000188185.13	novel	3049	12	NA	NA	-43	1531	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	6.9108610172684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTGAGTTTCTGCAC	39732917	False	NA	39	True	TATAAA	-20	NA	39733545	39794623	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_39734045_39767403_39767671_39771004_39771092_39779270_39779386_39780502_39780625_39781234_39781352_39781743_39781886_39782734_39782800_39789353_39789545_39791593_39791652_39791743
WTC11_00082064	chr7	+	2250	4	FSM	ENSG00000065883.17	ENST00000645826.1	2250	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	19.6864307469779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTGTTATTGTGAA	40078399	False	NA	-52	True	NA	NA	NA	40078413	40095462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_40078852_40088125_40088332_40092964_40093238_40094129
WTC11_00082067	chr7	+	1358	1	FSM	ENSG00000237972.1	ENST00000418303.1	1358	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTCCCCTAGGACAGG	43918673	False	NA	NA	False	NA	NA	NA	43918696	43920054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43918700_43920100
WTC11_00082069	chr7	+	618	4	FSM	ENSG00000106624.11	ENST00000434445.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGGGTGAGGGTCTGT	44110247	True	NA	NA	False	NA	NA	NA	44110263	44111622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44110347_44110724_44111058_44111153_44111240_44111506
WTC11_00082070	chr7	+	6694	5	FSM	ENSG00000106636.9	ENST00000478411.2	6688	5	-6	0	0	0	multi-exon	FALSE	canonical	3	405	junction_3	16.2230545829076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATAAAGTTGTCTTGAAA	44189539	True	NA	6	True	NA	NA	NA	44200971	44214269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132
WTC11_00082073	chr7	+	4836	19	NNC	ENSG00000122515.16	novel	5228	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	44	junction_15	30.5018214392372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCCGAGTCCCT	44746773	True	NA	14	True	ATTAAA	-14	NA	44748825	44768688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44765966_44766057_44766163_44766334_44766420_44766664_44767515
WTC11_00082075	chr7	+	2147	4	FSM	ENSG00000196262.15	ENST00000676977.1	2146	4	-1	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	8560.74051833264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	44515097	True	NA	28	True	AATAAA	-19	NA	44796679	44803115	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799701_44799875_44801286
WTC11_00082076	chr7	+	2296	12	NIC	ENSG00000164742.16	novel	12657	20	NA	NA	146	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	12.997138909572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTCATTCCTATTTC	45574018	False	NA	NA	False	ATTAAA	-15	NA	45574513	45680643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_45575183_45592758_45592909_45610378_45610498_45622631_45622744_45648669_45648798_45657726_45657886_45660041_45660184_45662058_45662215_45677868_45678064_45678165_45678264_45679708_45679794_45680360
WTC11_00082078	chr7	+	3050	11	NNC	ENSG00000272556.3	novel	10247	17	NA	NA	5727	-6261	intron_retention	FALSE	canonical	1	2	junction_7	7.14772691140337	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTACAGGCCCGTCTC	NA	False	NA	NA	False	NA	NA	NA	45779321	45809002	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_45779341_45781494_45781554_45782644_45783147_45788718_45788955_45791787_45791853_45795074_45795199_45797477_45797675_45798517_45798604_45805098_45805290_45807339_45807398_45807489
WTC11_00082079	chr7	+	1002	7	NIC	ENSG00000183696.14	novel	861	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_3	102.033355112706	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48086272	True	NA	9	True	ATTAAA	-15	NA	48089264	48108419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_48089419_48090187_48090365_48094762_48094828_48101823_48101871_48106872_48107083_48107360_48107508_48108217
WTC11_00082080	chr7	+	11231	4	FSM	ENSG00000188730.5	ENST00000340652.5	11322	4	7	84	7	-84	multi-exon	FALSE	canonical	3	7	junction_1	7.11805216802087	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTAGGCCGAATTTG	49773452	True	NA	NA	False	NA	NA	NA	49773644	49921866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_49774114_49775332_49776132_49802710_49802841_49912033
WTC11_00082081	chr7	+	491	3	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGCTGTCAAATAAACTC	51875935	False	NA	-27	True	NA	NA	NA	51876021	51880315	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51876134_51877939_51878010_51880006
WTC11_00082083	chr7	+	794	1	FSM	ENSG00000235720.1	ENST00000419271.1	1356	1	59	503	59	-503	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAATAGTAGTGTGAAG	NA	False	NA	NA	False	ATTAAA	-2	NA	63893344	63894138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_63893300_63894100
WTC11_00082084	chr7	+	424	1	FSM	ENSG00000228653.2	ENST00000456056.1	905	1	-9	490	-9	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATTTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	64500815	64501239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64500800_64501200
WTC11_00082086	chr7	+	459	2	NNC	ENSG00000197008.10	novel	2230	4	NA	NA	0	-32298	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	64790100	True	NA	5	True	CATAAA	-14	NA	64794427	64799505	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_64794572_64799190
WTC11_00082087	chr7	+	2946	3	ISM	ENSG00000197008.10	ENST00000359735.7	2679	4	102	5	0	0	intron_retention	FALSE	canonical	3	11	junction_2	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790162	True	NA	15	True	AATAAA	-29	NA	64794489	64833676	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_64794572_64814917_64815045_64830939
WTC11_00082091	chr7	+	679	5	ISM	ENSG00000164669.13	ENST00000438455.3	1935	15	26536	27294	26536	-27294	internal_fragment	FALSE	canonical	3	36	junction_1	33.7962645864894	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTATCCTCTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	65167776	65185500	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_65167821_65170186_65170362_65179291_65179498_65182973_65183117_65185389
WTC11_00082092	chr7	+	766	3	FSM	ENSG00000282381.2	ENST00000685802.1	757	3	-6	-3	-6	3	multi-exon	FALSE	canonical	3	9	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGAGTGTTTGGGGGAGT	65268614	True	NA	NA	False	NA	NA	NA	65269382	65313905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65269539_65303528_65303803_65313569
WTC11_00082093	chr7	+	2965	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	-18	0	-17	0	multi-exon	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	65369035	True	NA	-3	True	ATTAAA	-10	NA	65373820	65401125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65398340
WTC11_00082094	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	46	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	65369095	True	NA	18	True	AATAAA	-19	NA	65373880	65401081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65388805_65388902_65398340
WTC11_00082095	chr7	+	2414	12	FSM	ENSG00000228409.7	ENST00000442266.3	1798	12	-67	-549	0	0	multi-exon	FALSE	canonical	3	12	junction_3	29.6865164038886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65749854	True	NA	NA	False	AATAAA	-18	NA	65751047	65764222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65751279_65752163_65752311_65754526_65754662_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
WTC11_00082096	chr7	+	2236	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	11	2	0	1	multi-exon	FALSE	canonical	3	44	junction_1	19.1874959283383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTCTTGCAATGGTT	65749854	True	NA	NA	False	AATAAA	-19	NA	65751047	65764223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
WTC11_00082097	chr7	+	405	2	Fusion	ENSG00000224365.1_ENSG00000196715.7	novel	5895	3	NA	NA	0	-1	multi-exon	FALSE	canonical	3	323	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGTATTTATCAATACA	65870444	True	NA	NA	False	NA	NA	NA	65873269	66004136	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_65873566_66004027
WTC11_00082098	chr7	+	1458	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	-22	0	0	0	multi-exon	FALSE	canonical	1	24	junction_7	55.1505414499461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	66073627	True	NA	7	True	AATAAA	-15	NA	66075799	66092953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
WTC11_00082099	chr7	+	3456	7	FSM	ENSG00000241258.7	ENST00000360415.7	3139	7	238	-555	1	555	multi-exon	FALSE	canonical	1	1	junction_2	31.4823583755869	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGTCAGGAATTCAAGA	66111572	True	NA	NA	False	NA	NA	NA	66114841	66155123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66114971_66127703_66127741_66130126_66130249_66130743_66130843_66134279_66134375_66145442_66145501_66152207
WTC11_00082100	chr7	+	3135	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	32.8	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	NA	False	NA	18	True	AATAAA	-19	NA	66205275	66360443	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66358798
WTC11_00082101	chr7	+	2812	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	33.9611542795589	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	66202246	True	NA	18	True	AATAAA	-19	NA	66205343	66360443	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359053
WTC11_00082102	chr7	+	4799	4	FSM	ENSG00000243335.10	ENST00000275532.8	4795	4	-4	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.8374122383748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAGGGCATTAAAGTCA	66627970	True	NA	-25	True	NA	NA	NA	66628880	66643017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66629209_66633274_66633445_66638252_66638392_66638855
WTC11_00082103	chr7	+	4471	3	FSM	ENSG00000243335.10	ENST00000638540.1	4471	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTCAAGAACTAGAACC	66629032	False	NA	-13	True	NA	NA	NA	66629090	66643029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66629209_66638252_66638432_66638855
WTC11_00082104	chr7	+	1931	4	Fusion	ENSG00000232546.1_ENSG00000230295.1	novel	298	4	NA	NA	7288	-1778	multi-exon	FALSE	canonical	3	9	junction_1	2.35702260395516	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTATTTGCCACTG	66855770	False	NA	NA	False	AATAAA	-4	NA	66855783	66881203	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_66857073_66858076_66858136_66863605_66863694_66880708
WTC11_00082105	chr7	+	6223	12	Fusion	ENSG00000273142.1_ENSG00000230295.1	novel	351	3	NA	NA	2017	-1	multi-exon	FALSE	canonical	2	4	junction_9	7.58532728909206	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATGTGAAACATTTT	NA	False	NA	13	True	AATAAA	-24	NA	66882724	66906296	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_66882968_66884252_66884402_66885058_66885247_66886351_66886456_66890250_66890412_66893386_66893452_66893916_66894019_66896554_66896650_66898178_66898295_66899079_66899204_66900787_66900898_66901530
WTC11_00082106	chr7	+	1610	6	FSM	ENSG00000106609.16	ENST00000433271.6	1610	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	165.971804834436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	66916051	True	NA	11	True	AATAAA	-21	NA	66921261	66956153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66953225_66953370_66955501
WTC11_00082107	chr7	+	1918	1	NIC	ENSG00000230358.6	novel	3286	9	NA	NA	1823	-8324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCTGTCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67278763	67280681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_67278800_67280700
WTC11_00082108	chr7	+	1691	4	FSM	ENSG00000106610.16	ENST00000691248.1	783	4	13	-921	-7	-201	multi-exon	FALSE	canonical	3	10	junction_2	67.2755527662166	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAACTTCTTTTAAAC	67301070	True	NA	6	True	AATAAA	-18	NA	67302666	67321325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_67302886_67305986_67306084_67309563_67309716_67320102
WTC11_00082109	chr7	+	7567	14	NIC	ENSG00000158321.18	novel	4583	14	NA	NA	-1687	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	47.8102759373662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	70692370	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082110	chr7	+	7615	14	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	-1687	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	36.2621944394176	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	70692370	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766356_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082111	chr7	+	4255	9	NIC	ENSG00000158321.18	novel	4511	13	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	45.0872418207191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	70763283	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70763342_70764751_70765006_70766113_70766335_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082112	chr7	+	6675	7	NIC	ENSG00000158321.18	novel	4511	13	NA	NA	2545	201	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	43.5685921533187	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCGCTTGTGGTTTGT	70768839	False	NA	14	True	TATAAA	-14	NA	70768889	70793068	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70771645_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082113	chr7	+	777	2	FSM	ENSG00000158321.18	ENST00000646193.1	777	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCAGCTGGCCCGGGTG	70786905	False	NA	NA	False	NA	NA	NA	70786920	70790013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_70787432_70789747
WTC11_00082114	chr7	+	2482	4	NIC	ENSG00000225648.6	novel	1621	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	74	junction_1	47.2605073560955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72827843	True	NA	NA	False	AATAAA	-22	NA	72829493	72837376	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_72830814_72831601_72831799_72833763_72833929_72836576
WTC11_00082115	chr7	+	4077	16	NNC	ENSG00000196313.13	novel	6013	15	NA	NA	-90	-2085	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	70.1824922770788	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACACCCGCAAAAAGTAG	NA	False	NA	NA	False	GGGGCT	-26	NA	72879258	72946214	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_72879886_72881493_72881553_72890626_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
WTC11_00082116	chr7	+	7011	16	FSM	ENSG00000196313.13	ENST00000395270.5	7011	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	88.9365816498226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGCTTGGTAAAAGTCT	72875854	True	NA	NA	False	AATAAA	-13	NA	72879364	72951440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72879886_72890626_72890754_72890932_72891111_72913764_72913829_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72948327
WTC11_00082117	chr7	+	5480	14	ISM	ENSG00000196313.13	ENST00000627934.3	6013	15	11278	-4	11262	4	3prime_fragment	FALSE	canonical	3	91	junction_2	51.5071087183188	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTCTGCATTTTATTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	72890626	72948303	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
WTC11_00082118	chr7	+	1288	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	48	0	48	0	multi-exon	FALSE	canonical	2	2	junction_6	8.52447456836295	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	73005562	False	NA	NA	False	NA	NA	NA	73005588	73021103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
WTC11_00082119	chr7	+	705	6	FSM	ENSG00000174384.9	ENST00000333674.5	710	6	5	0	5	0	multi-exon	FALSE	canonical	3	4	junction_3	16.9776323437634	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73093661	73105389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73093797_73095681_73095769_73095934_73096048_73097383_73097568_73100617_73100707_73105292
WTC11_00082121	chr7	+	3886	2	FSM	ENSG00000071462.12	ENST00000471215.1	3886	2	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	73694067	False	NA	-72	True	AATGAA	-18	NA	73694113	73698136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73697695_73697831
WTC11_00082122	chr7	+	3056	30	FSM	ENSG00000049540.19	ENST00000380575.8	3043	30	-13	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.91618489881571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGGGATTATTTTTGA	74028079	True	NA	10	True	AATAAA	-22	NA	74028143	74069678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74028270_74035363_74035415_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
WTC11_00082124	chr7	+	249	1	FSM	ENSG00000207741.1	ENST00000385008.1	97	1	-176	24	-176	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGATTGAAACATGC	74191011	False	NA	NA	False	CATAAA	-44	NA	74191021	74191270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74191000_74191300
WTC11_00082125	chr7	+	5079	32	ISM	ENSG00000263001.8	ENST00000620879.4	4352	33	-40	5	0	-3	intron_retention	FALSE	canonical	3	807	junction_10	324.446375495737	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTCATTGCTCTCTCG	74646479	True	NA	NA	False	AATAAA	-22	NA	74657717	74760687	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779
WTC11_00082126	chr7	+	5142	33	ISM	ENSG00000263001.8	ENST00000614986.4	4415	34	-40	5	0	-3	intron_retention	FALSE	canonical	3	679	junction_10	368.298744015982	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTCATTGCTCTCTCG	74646479	True	NA	NA	False	AATAAA	-22	NA	74657717	74760687	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779
WTC11_00082127	chr7	+	4464	35	NNC	ENSG00000263001.8	novel	4515	35	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_9	509.072689760714	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCATTGCTCTCTCGGC	74646524	True	NA	NA	False	AATAAA	-24	NA	74657762	74760689	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714859_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
WTC11_00082130	chr7	+	493	3	ISM	ENSG00000158517.16	ENST00000455062.2	1437	7	10748	2	4574	-1	3prime_fragment	FALSE	canonical	3	22	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGAGGCTCTGCAGGAAT	74787844	True	NA	NA	False	AATAAA	-15	NA	74788016	74789313	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74788089_74788558_74788705_74789038
WTC11_00082131	chr7	+	2760	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3337	9934	intron_retention	FALSE	canonical	3	25	junction_3	6.59090282131363	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCCAGGTGTGGTGG	74889459	True	NA	NA	False	AATAAA	-29	NA	74890778	74907769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
WTC11_00082132	chr7	+	1298	5	FSM	ENSG00000174428.19	ENST00000620662.1	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	113.015485664576	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAAAACTTG	75090601	True	NA	NA	False	NA	NA	NA	75092572	75123877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75092766_75108959_75109064_75112396_75112536_75120890_75121011_75123135
WTC11_00082133	chr7	+	3568	16	FSM	ENSG00000174428.19	ENST00000472837.7	3551	16	-17	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	79.621493468926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTAGTTGACTTTTC	75090601	True	NA	NA	False	ATTAAA	-22	NA	75092572	75149817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75092766_75108959_75109064_75112396_75112536_75120890_75121011_75123135_75123320_75123487_75123517_75125915_75125971_75126341_75126386_75133134_75133213_75135000_75135058_75136784_75136851_75138949_75139028_75141102_75141187_75142481_75142666_75143949_75143979_75147693
WTC11_00082135	chr7	+	1122	8	FSM	ENSG00000205583.14	ENST00000619870.4	1192	8	70	0	33	0	multi-exon	FALSE	canonical	1	1	junction_6	27.2801041352971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTATGCCCGGCAGA	75359251	False	NA	NA	False	NA	NA	NA	75359263	75395368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75385082_75385157_75394972
WTC11_00082137	chr7	+	1477	5	FSM	ENSG00000223705.10	ENST00000687621.1	1476	5	-3	2	-1	0	multi-exon	FALSE	canonical	3	130	junction_1	104.986903945206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	75409561	True	NA	15	True	AATAAA	-16	NA	75410348	75416785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75416192_75416274
WTC11_00082138	chr7	+	4648	7	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	206	junction_2	73.7601217159757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409561	True	NA	16	True	AATAAA	-17	NA	75410348	75416786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75415024_75415119_75415235_75415591_75416192_75416274
WTC11_00082139	chr7	+	1925	11	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_5	143.8173842065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	75409607	True	NA	15	True	AATAAA	-16	NA	75410394	75416785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75411407_75411575_75411654_75411760_75412788_75412933_75414639_75414799_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
WTC11_00082140	chr7	+	1548	6	NIC	ENSG00000223705.10	novel	1836	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	163.252442554468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	75409607	True	NA	15	True	AATAAA	-16	NA	75410394	75416785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75414884_75415024_75415119_75415235_75415595_75416192_75416274
WTC11_00082141	chr7	+	2440	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_7	111.018861010191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409607	True	NA	16	True	AATAAA	-17	NA	75410394	75416786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
WTC11_00082142	chr7	+	2458	10	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_9	139.843563392178	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409607	True	NA	16	True	AATAAA	-17	NA	75410394	75416786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415981_75416102_75416192_75416274_75416416_75416485
WTC11_00082143	chr7	+	1924	11	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_5	142.452132311173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	75409607	True	NA	22	True	AATAAA	-23	NA	75410394	75416792	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75411407_75411575_75411654_75411760_75412788_75412933_75414639_75414799_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
WTC11_00082144	chr7	+	3235	11	NNC	ENSG00000177679.16	novel	3617	15	NA	NA	-4808	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_6	18.6451065966382	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	76260107	True	NA	23	True	AATAAA	-18	NA	76260598	76287288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76260904_76261351_76261415_76261545_76261582_76264764_76264816_76265363_76265469_76267257_76267436_76281440_76281803_76282647_76282873_76282963_76283102_76283523_76283622_76285614
WTC11_00082145	chr7	+	2919	5	NIC	ENSG00000177679.16	novel	2150	4	NA	NA	-1614	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	19.6596032513375	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	76280918	False	NA	23	True	AATAAA	-18	NA	76280999	76287288	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76281803_76282647_76282873_76282963_76283102_76283523_76283603_76285614
WTC11_00082146	chr7	+	2167	4	NNC	ENSG00000177679.16	novel	2150	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	13.1233464566864	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	76281692	True	NA	22	True	AATAAA	-17	NA	76282614	76287287	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76282873_76282963_76283102_76283523_76283622_76285614
WTC11_00082147	chr7	+	2069	3	ISM	ENSG00000177679.16	ENST00000611745.2	3617	15	80719	0	1	0	3prime_fragment	FALSE	canonical	3	18	junction_2	22	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	76281692	True	NA	22	True	AATAAA	-17	NA	76282614	76287287	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_76282873_76282963_76283102_76285614
WTC11_00082148	chr7	+	1476	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	7	0	7	0	multi-exon	TRUE	canonical	2	9	junction_2	10.6763465192921	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	76397316	True	NA	NA	False	AATAAA	-15	NA	76397524	76442071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
WTC11_00082150	chr7	+	2649	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	-8	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	85.8976134709225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457826	True	NA	24	True	AATAAA	-16	NA	76461700	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00082151	chr7	+	2487	10	FSM	ENSG00000091073.20	ENST00000413936.6	2472	10	-15	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	94.3454383019924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCCTGAGTGTGTGC	76457826	True	NA	27	True	AATAAA	-19	NA	76461700	76505994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00082152	chr7	+	2560	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	89.8939017967677	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457845	True	NA	24	True	AATAAA	-16	NA	76461719	76505991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76476942_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00082153	chr7	+	1730	5	FSM	ENSG00000091073.20	ENST00000479915.5	1752	5	22	0	22	0	multi-exon	FALSE	canonical	3	163	junction_1	34.715810519128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTCCTGAGTGTGTGCA	NA	False	NA	28	True	AATAAA	-20	NA	76499823	76505995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
WTC11_00082154	chr7	+	2226	6	FSM	ENSG00000243566.7	ENST00000334348.8	2250	6	24	0	24	0	multi-exon	FALSE	canonical	0	0	junction_4	1.16619037896906	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCCTGAATGGTGCCC	NA	False	NA	NA	False	AATAAA	-17	NA	76510575	76516522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044
WTC11_00082155	chr7	+	384	3	NIC	ENSG00000265479.7	novel	4646	15	NA	NA	-46	-10202	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	61.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTCCTGGAAGTCATT	NA	False	NA	NA	False	NA	NA	NA	76959788	76968456	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76959950_76961656_76961822_76968398
WTC11_00082156	chr7	+	2631	14	Fusion	ENSG00000233448.2_ENSG00000265479.7	novel	4646	15	NA	NA	-46	3306	multi-exon	TRUE	non_canonical	0	0	junction_7	56.8804414134122	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGTGCAATAGGAGATAT	NA	False	NA	NA	False	NA	NA	NA	76959788	77047082	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_76959950_76978527_76978877_76980620_76981261_76990268_76990370_77000308_77000389_77002162_77002322_77003288_77003447_77004214_77004308_77005549_77005776_77011879_77011947_77040017_77040090_77041976_77042064_77043594_77043779_77046828
WTC11_00082158	chr7	+	5428	10	ISM	ENSG00000127947.16	ENST00000435495.6	2526	17	66173	-447	-2686	-2	3prime_fragment	FALSE	canonical	3	132	junction_2	48.8580710948673	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTACTTGTTGCCTTGGC	77604196	False	NA	17	True	ATTAAA	-21	NA	77604241	77640067	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
WTC11_00082159	chr7	+	605	4	FSM	ENSG00000187257.16	ENST00000441514.1	605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.0911166455055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCCTCCTTGGATTCT	77768649	False	NA	NA	False	NA	NA	NA	77768660	77778818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77768804_77773146_77773315_77778337_77778447_77778633
WTC11_00082160	chr7	+	1969	11	ISM	ENSG00000006576.16	ENST00000424760.5	1977	12	-52	2251	-31	195	5prime_fragment	TRUE	canonical	3	78	junction_10	12.6728055299527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTCTGTATCATTC	77796483	True	NA	NA	False	AATAAA	-17	NA	77798760	77938208	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709
WTC11_00082164	chr7	+	333	2	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAATTGCATTTGAGGG	83415844	True	NA	0	True	AATAAA	-41	NA	83416102	83432252	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_83416173_83431989
WTC11_00082165	chr7	+	660	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	248	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	83460017	False	NA	26	True	AATAAA	-24	NA	83460029	83465349	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_83460267_83464926
WTC11_00082166	chr7	+	3493	17	FSM	ENSG00000135164.19	ENST00000579850.5	3483	17	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	74.3916998058251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTTTTACATAGCCT	87148784	True	NA	20	True	AATAAA	-24	NA	87152439	87196332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188197_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
WTC11_00082167	chr7	+	3196	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	9	0	-8	0	multi-exon	FALSE	canonical	2	5	junction_10	9.28666864558394	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	87345170	True	NA	5	True	AATAAA	-17	NA	87345672	87399794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
WTC11_00082168	chr7	+	4069	11	FSM	ENSG00000105784.16	ENST00000394654.4	4063	11	-6	0	-6	0	multi-exon	FALSE	canonical	1	1	junction_2	2.41660919471891	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTGGTCTTATTTTGC	87628345	True	NA	2	True	ATTAAA	-15	NA	87628391	87832296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
WTC11_00082170	chr7	+	982	7	FSM	ENSG00000008277.15	ENST00000412441.5	726	7	0	-256	0	256	multi-exon	FALSE	canonical	1	4	junction_3	12.657891697365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTGTATATTTTAAACT	87933450	False	NA	NA	False	CATAAA	-24	NA	87934328	88114904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87934551_87935025_87935187_87964633_87964685_87978335_87978413_88075625_88075693_88108175_88108259_88114583
WTC11_00082171	chr7	+	7688	6	NNC	ENSG00000157214.14	novel	6984	6	NA	NA	26	163	intron_retention	FALSE	canonical	3	10	junction_1	12.9707362936728	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGAGGATTGTCAGGT	90210818	True	NA	NA	False	NA	NA	NA	90211711	90238300	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90212046_90216431_90216604_90225049_90225575_90226970_90227499_90229871_90230037_90232336
WTC11_00082172	chr7	+	2460	6	FSM	ENSG00000157214.14	ENST00000394626.5	2456	6	-4	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	15.2787434038274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAGGCCTTCTAAT	90210846	True	NA	72	True	ATTAAA	-15	NA	90211739	90237678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336_90232485_90236890
WTC11_00082174	chr7	+	988	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	-12	5937	0	0	multi-exon	FALSE	canonical	1	3	junction_3	38.2557185267771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTCTGATACAATGTC	90344509	True	NA	-92	True	AAGAAA	-16	NA	90346694	90385076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
WTC11_00082175	chr7	+	3546	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	-13	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	148.963828569966	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397714	True	NA	32	True	ATTAAA	-17	NA	90403447	90415954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
WTC11_00082176	chr7	+	747	3	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	204	-104296	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	117.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGCTTAGTAAATGT	90596499	False	NA	NA	False	AATAAA	-19	NA	90596524	90622348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90596719_90604217_90604250_90621827
WTC11_00082177	chr7	+	12466	50	FSM	ENSG00000127914.19	ENST00000356239.8	12476	50	10	0	-6	0	multi-exon	FALSE	canonical	2	6	junction_18	21.7677912222136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTGAACCTTCTTCA	91938059	True	NA	23	True	AATAAA	-25	NA	91940871	92110673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847_92003236_92012428_92012643_92014248_92014329_92016128_92016268_92017016_92017103_92022237_92022353_92022813_92023010_92029894_92029992_92031511_92031605_92038418_92038773_92040673_92040899_92042045_92042187_92042667_92042772_92045007_92045214_92052725_92052959_92061259_92061423_92062273_92062487_92065230_92065464_92066426_92066547_92070029_92070207_92070904_92071010_92076854_92077008_92077695_92077876_92079078_92080153_92082521_92082663_92083169_92083656_92084639_92084704_92084818_92084941_92085494_92085687_92086227_92086417_92089384_92089530_92093096_92093317_92095022_92095174_92096688_92097358_92097585_92097795_92098108_92098215_92099686_92099870_92100855_92101057_92102593_92102827_92105677_92105764_92107292_92107423_92108493_92108634_92110121
WTC11_00082178	chr7	+	5095	3	ISM	ENSG00000001629.10	ENST00000422095.1	2036	9	23806	-2722	-491	687	3prime_fragment	TRUE	canonical	3	86	junction_1	5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGATAGTATATCTCTG	92395367	False	NA	NA	False	ATTAAA	-37	NA	92395377	92402070	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_92396477_92397722_92397860_92398211
WTC11_00082179	chr7	+	723	2	FSM	ENSG00000001629.10	ENST00000465883.1	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCAGGACTCTCTTC	92395858	False	NA	NA	False	NA	NA	NA	92395868	92397837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92396477_92397722
WTC11_00082186	chr7	+	5168	53	NNC	ENSG00000164692.19	novel	5072	52	NA	NA	-515	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	103.820367168746	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	94394350	False	NA	NA	False	AATAAA	-45	NA	94394379	94431227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_94394478_94394896_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
WTC11_00082187	chr7	+	2805	40	ISM	ENSG00000164692.19	ENST00000297268.11	5072	52	-103	8109	-103	0	5prime_fragment	FALSE	canonical	0	0	junction_2	85.5217886351832	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATTTCCAACTCCT	94392510	True	NA	NA	False	NA	NA	NA	94394791	94423118	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956
WTC11_00082194	chr7	+	12577	71	FSM	ENSG00000196367.14	ENST00000355540.7	12590	71	13	0	13	0	multi-exon	TRUE	canonical	1	1	junction_15	42.8713428856191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCCCTTGTTTATGTT	98872280	True	NA	84	True	AATAAA	-18	NA	98878502	99013243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983460_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993591_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
WTC11_00082195	chr7	+	12589	71	NIC	ENSG00000196367.14	novel	12675	73	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	42.9378858447447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTCCCTTGTTTATGT	98872321	True	NA	83	True	AATAAA	-17	NA	98878543	99013242	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983460_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993537_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
WTC11_00082197	chr7	+	1742	8	NIC	ENSG00000160917.15	novel	1823	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	107	junction_6	260.831011052234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGTCTCATTAATT	99434266	True	NA	23	True	ATTAAA	-11	NA	99438942	99457370	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454043_99454137_99456431
WTC11_00082199	chr7	+	4526	5	NIC	ENSG00000196652.12	novel	4344	7	NA	NA	44	-433	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	27.5079533953364	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATCACAGCTCACTGCA	99504320	True	NA	NA	False	NA	NA	NA	99504993	99534267	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99505161_99506004_99506459_99512452_99512592_99525812_99526419_99531107
WTC11_00082200	chr7	+	5150	5	NIC	ENSG00000197343.11	novel	4624	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_3	33.9733351321297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTTGTTTCAAACAAAA	99554929	True	NA	11	True	AATAAA	-19	NA	99558717	99576449	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99558788_99560532_99560696_99561887_99562495_99571687_99571793_99572244
WTC11_00082201	chr7	+	4614	5	NNC	ENSG00000197343.11	novel	1815	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.6590536512467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTTGTTTCAAACAAAA	99554929	True	NA	11	True	AATAAA	-19	NA	99558717	99576449	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_99558788_99560532_99560696_99563862_99563934_99571687_99571793_99572244
WTC11_00082203	chr7	+	1906	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_4	51.2853536596951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	100048032	True	NA	5	True	AATAAA	-16	NA	100049771	100065038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
WTC11_00082206	chr7	+	622	4	FSM	ENSG00000188186.11	ENST00000460732.5	616	4	-6	0	-5	0	multi-exon	FALSE	canonical	3	52	junction_3	737.732110367081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139447	True	NA	21	True	AATAAA	-21	NA	100148906	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153849
WTC11_00082207	chr7	+	524	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	28	junction_1	1045	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139447	True	NA	21	True	AATAAA	-21	NA	100148906	100154203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100153399_100153518_100153866
WTC11_00082209	chr7	+	4321	34	FSM	ENSG00000066923.18	ENST00000426455.5	4450	34	129	0	-51	0	multi-exon	TRUE	canonical	2	4	junction_1	4.33513418820595	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTTCCCAAGGTGTGGC	NA	False	NA	3	True	AATAAA	-14	NA	100177691	100214380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100177906_100180492_100180673_100182089_100182193_100182722_100182840_100186199_100186297_100188452_100188530_100188811_100189017_100189444_100189597_100195308_100195383_100197155_100197280_100197777_100197877_100198086_100198167_100198474_100198583_100198842_100198958_100199261_100199368_100199540_100199645_100200235_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948_100202042_100202171_100202341_100202453_100202591_100204020_100204123_100204626_100204776_100205004_100205134_100205226_100205385_100211010_100211186_100211437_100211540_100211794_100211877_100213734_100213807_100214006
WTC11_00082210	chr7	+	3968	32	FSM	ENSG00000066923.18	ENST00000620100.5	3986	32	18	0	1	0	multi-exon	FALSE	canonical	1	1	junction_4	4.83160769127773	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTTCCCAAGGTGTGGC	100177882	False	NA	3	True	AATAAA	-14	NA	100177937	100214380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100177973_100180492_100180673_100182089_100182193_100182722_100182840_100188811_100189017_100189444_100189597_100195308_100195383_100197155_100197280_100197777_100197877_100198086_100198167_100198474_100198583_100198842_100198958_100199261_100199368_100199540_100199645_100200235_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948_100202042_100202171_100202341_100202453_100202591_100204020_100204123_100204626_100204776_100205004_100205134_100205226_100205385_100211010_100211186_100211437_100211540_100211794_100211877_100213734_100213807_100214006
WTC11_00082212	chr7	+	4201	34	FSM	ENSG00000066923.18	ENST00000615138.5	4199	34	-2	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.28999305407834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	100177860	True	NA	4	True	AATAAA	-15	NA	100177915	100214381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100178006_100180492_100180673_100182089_100182193_100182722_100182840_100186199_100186297_100188452_100188530_100188811_100189017_100189444_100189597_100195308_100195383_100197155_100197280_100197777_100197877_100198086_100198167_100198474_100198583_100198842_100198958_100199261_100199368_100199540_100199645_100200235_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948_100202042_100202171_100202341_100202453_100202591_100204020_100204123_100204626_100204776_100205004_100205134_100205226_100205385_100211010_100211186_100211434_100211540_100211794_100211877_100213734_100213807_100214006
WTC11_00082215	chr7	+	2949	16	NNC	ENSG00000272752.6	novel	3634	18	NA	NA	0	69	intron_retention	FALSE	canonical	3	10	junction_12	56.9917732854683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCCTTTTCTCCTCGTC	100331432	True	NA	36	True	AATACA	-19	NA	100336113	100367732	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100351411_100352261_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100355142_100355241_100356749_100356884_100358241_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00082216	chr7	+	2177	15	NIC	ENSG00000272752.6	novel	2661	17	NA	NA	3	69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	58.9971030073961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCCTTTTCTCCTCGTC	100331444	True	NA	36	True	AATACA	-19	NA	100336125	100367732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349798_100349888_100351251_100351411_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358932_100359080_100359336_100359538_100367348
WTC11_00082217	chr7	+	3160	20	NIC	ENSG00000272752.6	novel	3634	18	NA	NA	8	6602	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	60.0270483815098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCAGCTGCCCTGGC	100331449	True	NA	NA	False	NA	NA	NA	100336130	100374433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336221_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100351411_100352162_100352479_100352563_100352668_100352760_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358898_100359080_100359336_100359538_100367348_100367618_100373580_100373721_100374043
WTC11_00082218	chr7	+	2945	17	NIC	ENSG00000272752.6	novel	3634	18	NA	NA	11	69	intron_retention	FALSE	canonical	3	13	junction_6	52.0190770294899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCCTTTTCTCCTCGTC	100331452	True	NA	36	True	AATACA	-19	NA	100336133	100367732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336221_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100351411_100352261_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00082224	chr7	+	998	7	NIC	ENSG00000106333.13	novel	960	4	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.0590944235342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603360	True	NA	4	True	AATAAA	-14	NA	100604459	100608171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100604503_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00082227	chr7	+	2823	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.4280190404993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCTGGCTGAGCAGTG	100850419	True	NA	12	True	AATAAA	-13	NA	100852712	100867008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100852836_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
WTC11_00082228	chr7	+	2987	12	NIC	ENSG00000146828.18	novel	1912	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	24.0306278399081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100850483	True	NA	13	True	AATAAA	-14	NA	100852776	100867009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
WTC11_00082230	chr7	+	1246	7	NIC	ENSG00000087087.20	novel	2990	20	NA	NA	-2	-60	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	358.586460982564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATAACCTTCTCCTGGAC	100858212	True	NA	NA	False	NA	NA	NA	100875123	100884179	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100882764_100883091_100884069
WTC11_00082234	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	101017081	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101017398_101017574_101017664_101018594
WTC11_00082235	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101017152	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101017664_101018594
WTC11_00082236	chr7	+	1435	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	-204	-452	-204	3	multi-exon	FALSE	canonical	1	1	junction_1	117.22734322674	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCCTTGGGCTCTGTG	101154760	False	NA	15	True	AATAAA	-22	NA	101154780	101161279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
WTC11_00082237	chr7	+	808	2	FSM	ENSG00000288749.1	ENST00000692398.1	826	2	22	-4	22	4	multi-exon	FALSE	canonical	3	995	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGAGGTCGATTTTTT	101290770	True	NA	34	True	ATTAAA	-36	NA	101302793	101304582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101303029_101304009
WTC11_00082240	chr7	+	3441	10	NIC	ENSG00000128563.13	novel	3430	10	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	62.7430582457111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTGTCTGGGACTGG	102362113	True	NA	22	True	AATAAA	-37	NA	102363871	102426681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
WTC11_00082242	chr7	+	2183	7	NNC	ENSG00000128563.13	novel	2159	6	NA	NA	0	14889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.3443909159311	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGTGGCTCTTGCTAT	102393832	True	NA	NA	False	AAAAAG	-13	NA	102396362	102441565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013_102426666_102441540
WTC11_00082248	chr7	+	2780	11	FSM	ENSG00000161057.13	ENST00000679046.1	2776	11	-4	0	0	0	multi-exon	FALSE	canonical	3	860	junction_8	68.7197933640665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGTTAGGCTTCTG	103338982	True	NA	NA	False	TTTAAA	-10	NA	103347635	103368859	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
WTC11_00082250	chr7	+	3337	7	FSM	ENSG00000161057.13	ENST00000676908.1	3341	7	4	0	4	0	multi-exon	FALSE	canonical	3	860	junction_4	83.9358220441202	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	103361515	False	NA	-11	True	ATTAAA	-4	NA	103361549	103369375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
WTC11_00082251	chr7	+	1844	1	FSM	ENSG00000197258.5	ENST00000431936.1	1828	1	-16	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTACATCCTGTGCTTT	104667720	True	NA	NA	False	NA	NA	NA	104667732	104669576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_104667700_104669600
WTC11_00082252	chr7	+	3112	16	NIC	ENSG00000005483.22	novel	6840	26	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	15.8029533104839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGACTTAAGCAATTA	105009978	True	NA	15	True	AATAAA	-17	NA	105014188	105102649	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885
WTC11_00082258	chr7	+	1454	3	NIC	ENSG00000128536.16	novel	1603	4	NA	NA	-9	1271	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGAGTGTTGTTTTAA	105875324	True	NA	NA	False	AATAAA	-13	NA	105876808	105911869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_105877258_105878206_105878359_105911016
WTC11_00082259	chr7	+	2800	6	NNC	ENSG00000128536.16	novel	993	4	NA	NA	-4	-1145	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	8.13879597975032	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAAACCTTGCTTCGTG	105875329	True	NA	0	True	AATAAA	-17	NA	105876813	105923038	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105877258_105910226_105910378_105911016_105911242_105912482_105912639_105919534_105919608_105921287
WTC11_00082260	chr7	+	1446	3	NNC	ENSG00000128536.16	novel	2199	15	NA	NA	1	1274	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	1.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGTTGTTTTAACTC	105875334	True	NA	NA	False	AATAAA	-16	NA	105876818	105911872	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105877258_105910226_105910378_105911016
WTC11_00082261	chr7	+	254	2	FSM	ENSG00000128536.16	ENST00000471910.1	392	2	0	138	0	1	multi-exon	FALSE	canonical	3	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCACACTTTGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	106001546	106004687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_106001611_106004497
WTC11_00082264	chr7	+	1512	7	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	20.9920619917784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATACTAAGAAATTAT	107562756	True	NA	NA	False	AATAAA	-1	NA	107564020	107577908	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_107564210_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
WTC11_00082265	chr7	+	765	1	FSM	ENSG00000231006.1	ENST00000457119.1	744	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGACTATTT	NA	False	NA	NA	False	AATGAA	-5	NA	108510211	108510976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_108510200_108511000
WTC11_00082267	chr7	+	3078	15	FSM	ENSG00000288640.1	ENST00000676282.1	3135	15	0	57	0	-57	multi-exon	FALSE	canonical	0	0	junction_12	89.7277344332878	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATATGAGTCTTAGAAAA	112445755	True	NA	NA	False	AATAAA	-12	NA	112450459	112490884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429_112475677_112484811_112484944_112486922_112487052_112489809
WTC11_00082268	chr7	+	1537	6	ISM	ENSG00000135269.18	ENST00000358204.9	2736	7	-29	6045	4	0	5prime_fragment	FALSE	canonical	3	379	junction_2	21.8961183774659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	116205286	True	NA	5	True	AATAAA	-18	NA	116210509	116252738	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317
WTC11_00082269	chr7	+	3099	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	-142	-4	-142	4	multi-exon	FALSE	canonical	3	46	junction_1	3	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATTGCTTTTATTA	116499255	True	NA	12	True	AATAAA	-20	NA	116499595	116508545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116499932_116500259_116500448_116505970
WTC11_00082271	chr7	+	617	4	NIC	ENSG00000128534.8	novel	290	3	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	329.940398658101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTTTTTTTT	118177735	True	NA	20	True	ATTAAA	-20	NA	118184083	118192155	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
WTC11_00082279	chr7	+	4956	4	NIC	ENSG00000197462.3	novel	837	5	NA	NA	-8	4368	combination_of_known_splicesites	FALSE	canonical	2	58	junction_1	34.7211110933328	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTTGCTGAAATT	125917018	True	NA	NA	False	AATAAA	-2	NA	125917862	125938200	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_125918119_125920056_125920154_125924211_125924388_125933773
WTC11_00082280	chr7	+	640	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-8	24008	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_1	37.249906785864	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATCCTAAATGTCCTT	125917018	True	NA	7	True	AATAAA	-36	NA	125917862	125957840	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125920056_125920154_125924211_125924388_125957729
WTC11_00082282	chr7	+	1677	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6124	-3637	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	126	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCCTTTGTATAGTTC	125917508	True	NA	16	True	AATAAA	-21	NA	125923994	125930195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_125928745
WTC11_00082284	chr7	+	434	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6124	74234	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_2	139.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGTATATTTCATT	125917508	True	NA	17	True	AATATA	-26	NA	125923994	126008066	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_126007859
WTC11_00082285	chr7	+	3120	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6124	105233	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_2	152	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGAGACTGATTTATT	125917508	True	NA	22	True	AATAAA	-17	NA	125923994	126039065	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_126036172
WTC11_00082286	chr7	+	1159	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6124	108596	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	167	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTCTTCATGACTTT	125917508	True	NA	7	True	TATAAA	-23	NA	125923994	126042428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_126041496
WTC11_00082287	chr7	+	2125	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGTTCCTTTGTAT	125928055	False	NA	11	True	AATAAA	-16	NA	125928065	125930190	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_125928100_125930200
WTC11_00082295	chr7	+	3882	18	NIC	ENSG00000128596.17	novel	4246	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	17.310516434779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAGACTGTGGATTT	128789415	True	NA	NA	False	ATTAAA	-12	NA	128791451	128822125	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128809449_128809645_128810138_128810367_128811799_128812313_128812707_128812930_128814637_128814920_128815613_128815932_128821798
WTC11_00082296	chr7	+	3684	18	NIC	ENSG00000128596.17	novel	4246	18	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_16	18.4947388011239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGACTGTGGATTTTTA	128789435	True	NA	NA	False	ATTAAA	-15	NA	128791471	128822128	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128809449_128809645_128810138_128810367_128811799_128812313_128812707_128812930_128814637_128814920_128815794_128815932_128821798
WTC11_00082310	chr7	+	11052	18	NNC	ENSG00000128585.18	novel	11136	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_17	81.5728599957687	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATATCTCTTGTATTTG	131322081	True	NA	19	True	AATAAA	-20	NA	131327883	131496632	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487682
WTC11_00082324	chr7	+	665	3	FSM	ENSG00000090266.13	ENST00000479181.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_2	554.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGAATGGAGTTGT	140702510	False	NA	15	True	ATTAAA	-25	NA	140702522	140706635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140703011_140704859_140704964_140706562
WTC11_00082332	chr7	+	649	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3067	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	24.7296493213219	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410375	True	NA	9	True	AATAAA	-23	NA	143410879	143415830	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143415536
WTC11_00082333	chr7	+	520	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3074	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	33	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410382	True	NA	9	True	AATAAA	-23	NA	143410886	143415830	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_143410981_143415067_143415200_143415536
WTC11_00082338	chr7	+	547	5	NIC	ENSG00000244198.7	novel	531	5	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	199.123077517399	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTACCCAGTCTGTGA	144195509	False	NA	NA	False	AATAAA	-13	NA	144195519	144243829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144243746
WTC11_00082341	chr7	+	861	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-49	218	combination_of_known_junctions	FALSE	canonical	3	148	junction_4	79.9640544244725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGGATGGCGGGACT	NA	False	NA	NA	False	AATAGA	-18	NA	144195838	144250799	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144207692_144207805_144239039_144239096_144239274_144239389_144250439
WTC11_00082343	chr7	+	2969	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-33	10	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTAATATGGTAGT	NA	False	NA	NA	False	ATTAAA	-23	NA	144195854	144216667	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144207692_144207805_144214013
WTC11_00082350	chr7	+	1127	6	NIC	ENSG00000244560.7	novel	2419	7	NA	NA	13	-106	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	11.7405280971513	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGAAGGTGTTCTTTC	149284146	True	NA	NA	False	AAAAAG	-23	NA	149285293	149293947	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_149285697_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149293750
WTC11_00082356	chr7	+	5198	1	FSM	ENSG00000214022.12	ENST00000425389.2	2876	1	-2322	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150362091	True	NA	21	True	AATAAA	-16	NA	150368841	150374039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368800_150374000
WTC11_00082357	chr7	+	2502	3	FSM	ENSG00000284048.2	ENST00000483664.5	582	3	-45	-1875	-45	1875	multi-exon	FALSE	canonical	0	0	junction_2	42	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAAGGAGTGGTCATT	150379269	False	NA	8	True	AATAAA	-19	NA	150379283	150412472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150379393_150388421_150388502_150410159
WTC11_00082362	chr7	+	3708	7	FSM	ENSG00000197150.13	ENST00000482899.1	3743	7	35	0	35	0	multi-exon	FALSE	canonical	3	7	junction_2	28.7252308761634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGTCTGCCAGAGTCA	151036454	False	NA	13	True	NA	NA	NA	151037722	151045562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151040302_151040497_151040645_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
WTC11_00082364	chr7	+	571	5	FSM	ENSG00000133612.19	ENST00000490097.5	604	5	33	0	-3	0	multi-exon	FALSE	canonical	3	11	junction_1	92.3400644357583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGCGGGGCCCTGCAG	151085837	False	NA	NA	False	NA	NA	NA	151085863	151117776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151086061_151116792_151116852_151117094_151117183_151117370_151117457_151117635
WTC11_00082365	chr7	+	4561	18	NIC	ENSG00000133612.19	novel	3494	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_11	50.5125973530315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTTTCCCCCTTTT	151084861	True	NA	13	True	AATAAA	-15	NA	151086474	151144432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00082366	chr7	+	3305	17	NIC	ENSG00000133612.19	novel	3494	18	NA	NA	16	0	intron_retention	FALSE	canonical	2	8	junction_11	56.9031180494531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTTTCCCCCTTTT	151084877	True	NA	13	True	AATAAA	-15	NA	151086490	151144432	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00082367	chr7	+	3169	16	NIC	ENSG00000133612.19	novel	3494	18	NA	NA	16	0	intron_retention	FALSE	canonical	3	30	junction_11	51.2408691053017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	151084877	True	NA	15	True	AATAAA	-17	NA	151086490	151144434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00082373	chr7	+	2055	12	NNC	ENSG00000133627.18	novel	2213	12	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	82.4877651834421	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCTGTAGTGTGGT	152754704	True	NA	18	True	AATAAA	-24	NA	152759812	152855376	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820348_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
WTC11_00082376	chr7	+	1829	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-32	0	multi-exon	FALSE	canonical	0	0	junction_1	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	155001808	True	NA	26	True	AATAAA	-38	NA	155003415	155005703	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_155003709_155003961_155004135_155004340
WTC11_00082377	chr7	+	1965	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	0	0	multi-exon	FALSE	canonical	2	44	junction_1	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	155001840	True	NA	26	True	AATAAA	-38	NA	155003447	155005703	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_155003877_155003961_155004135_155004340
WTC11_00082378	chr7	+	2958	6	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	165.606038537247	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGTTGTATTTATGT	155292173	True	NA	12	True	ATTAAA	-9	NA	155297890	155310230	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_155298028_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
WTC11_00082381	chr7	+	3760	26	NNC	ENSG00000126870.16	novel	3789	25	NA	NA	146	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.8319456118284	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCTCTGCCAATAGTG	158854936	False	NA	4	True	ATTAAA	-18	NA	158856703	158946187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158900145_158900265_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
WTC11_00082382	chr7	+	5410	20	FSM	ENSG00000126870.16	ENST00000467220.1	5410	20	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_5	30.3683754446433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	NA	False	NA	6	True	ATTAAA	-20	NA	158884573	158946189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158905284_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
WTC11_00082383	chr7	-	580	3	NIC	ENSG00000242474.3	novel	738	4	NA	NA	0	-611	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCTTATTCTTTGAG	-148673	True	NA	NA	False	AATGAA	-8	NA	149438	145054	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_145416_148531_148619_149306
WTC11_00082386	chr7	-	2209	3	NNC	ENSG00000242474.3	novel	2091	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	-7	True	ATTAAA	-16	NA	149480	145935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_147906_148531_148619_149328
WTC11_00082388	chr7	-	4252	6	FSM	ENSG00000197461.13_ENSG00000234471.1	ENST00000402802.7	2305	6	0	-1947	0	1947	multi-exon	FALSE	canonical	2	5	junction_3	3.31058907144937	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAAGAATTCTAGGGG	-519316	False	NA	NA	False	NA	NA	NA	519409	495310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
WTC11_00082389	chr7	-	6608	1	FSM	ENSG00000273151.1	ENST00000609998.1	6758	1	413	-263	413	263	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGAGCCCGGGCTGCT	NA	False	NA	NA	False	NA	NA	NA	886134	879526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_879500_886100
WTC11_00082391	chr7	-	1325	6	NNC	ENSG00000146540.15	novel	2138	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	410.381773474408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1124952	True	NA	-38	True	AATAAA	-7	NA	1138247	997015	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1137314_1137408_1138210
WTC11_00082392	chr7	-	766	5	NIC	ENSG00000178381.12	novel	853	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	69.6648225433755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	-1157931	True	NA	-3	True	AATAAA	-20	NA	1160176	1152905	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_1153132_1155452_1155585_1157655_1157751_1158157_1158258_1159963
WTC11_00082393	chr7	-	1299	3	FSM	ENSG00000164877.19	ENST00000496184.1	2722	3	1434	-11	-84	-3	multi-exon	FALSE	canonical	0	0	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACAGTTGTGTAAAACT	NA	False	NA	NA	False	ATTAAA	-25	NA	1437997	1428467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1428792_1436741_1437609_1437889
WTC11_00082398	chr7	-	5577	25	NIC	ENSG00000198286.10	novel	4287	25	NA	NA	9	1302	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	20.1363408349735	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGGCCTGTAGCAT	-3042245	True	NA	NA	False	AATAAA	-40	NA	3043858	2904839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
WTC11_00082400	chr7	-	6518	17	ISM	ENSG00000182095.15	ENST00000430969.6	10839	30	120	44477	120	714	5prime_fragment	TRUE	canonical	0	0	junction_12	7.54051556592784	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCCTTGTCTCTCT	-5423650	False	NA	NA	False	ATTAAA	-26	NA	5423714	5351287	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374_5371365_5374054_5374485_5376033_5376225_5376846_5376994_5377370_5377577_5377921_5378025_5387671_5389337_5390484_5390629_5394439_5394596_5421059_5421490_5423440
WTC11_00082401	chr7	-	6195	16	NIC	ENSG00000182095.15	novel	10839	30	NA	NA	13	714	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	7.85252967025418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCCTTGTCTCTCT	-5423463	True	NA	NA	False	ATTAAA	-26	NA	5423821	5351287	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374_5371365_5374054_5374485_5376033_5376225_5376846_5376994_5377370_5377577_5377921_5378025_5387671_5389337_5390484_5390629_5394439_5394596_5423440
WTC11_00082403	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	247	junction_4	13034.1741395456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
WTC11_00082404	chr7	-	715	3	FSM	ENSG00000075624.17	ENST00000464611.1	715	3	0	0	0	0	multi-exon	TRUE	canonical	1	57	junction_1	15412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCAAGTGTGACTTTG	-5528033	False	NA	-8	True	AATAAA	-18	NA	5528098	5527150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527612_5527732_5527892_5528003
WTC11_00082406	chr7	-	5632	18	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	8947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8596826010368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCCAGAGGGGTGT	-5777626	True	NA	NA	False	NA	NA	NA	5781663	5611099	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5611130_5620050_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
WTC11_00082407	chr7	-	2684	14	FSM	ENSG00000122512.16	ENST00000642292.1	2679	14	0	-5	0	0	multi-exon	FALSE	canonical	2	8	junction_13	32.8388570529545	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	-6006505	True	NA	-2	True	AATACA	-44	NA	6009097	5973241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6008996
WTC11_00082409	chr7	-	2498	13	NIC	ENSG00000164535.15	novel	2839	15	NA	NA	1	46	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	43.1634490435291	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTACTATACTGGGTGGTT	-6445325	True	NA	35	True	NA	NA	NA	6447951	6409079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6436361_6436534_6445952_6446105_6447747
WTC11_00082410	chr7	-	1924	1	FSM	ENSG00000231359.3	ENST00000496556.1	306	1	-829	-789	-829	789	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTTTTCTACATTTG	NA	False	NA	NA	False	AATAAA	-6	NA	6491927	6490003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6490000_6491900
WTC11_00082412	chr7	-	700	3	FSM	ENSG00000215018.10	ENST00000453441.1	700	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCCAGCTTCATCCAT	NA	False	NA	NA	False	NA	NA	NA	7360459	7356567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7357021_7358628_7358806_7360389
WTC11_00082413	chr7	-	1648	2	FSM	ENSG00000272732.1	ENST00000608770.1	1655	2	0	7	0	-7	multi-exon	FALSE	canonical	3	5	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAAGTTTTCTTGTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	7552440	7550110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7551477_7552158
WTC11_00082414	chr7	-	242	2	FSM	ENSG00000272894.5	ENST00000609307.1	248	2	6	0	6	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAG	NA	False	NA	NA	False	NA	NA	NA	7554743	7552736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7552923_7554687
WTC11_00082415	chr7	-	2369	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	79	junction_12	82.0001443208428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGTTTATGGAGTCT	-8259999	True	NA	45	True	ATTAAA	-23	NA	8262543	8113185	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262439
WTC11_00082416	chr7	-	744	3	FSM	ENSG00000003147.19	ENST00000470696.1	800	3	56	0	56	0	multi-exon	FALSE	canonical	3	283	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTGATTTTTATTT	NA	False	NA	NA	False	AAGAAA	-31	NA	8157708	8141764	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8141818_8143874_8143973_8157115
WTC11_00082417	chr7	-	4516	21	NNC	ENSG00000146530.15	novel	5936	30	NA	NA	-16985	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	12.6723123383225	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	NA	False	NA	-5	True	AATAAA	-23	NA	12373315	12330884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12354349_12354488_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372421
WTC11_00082419	chr7	-	4850	28	NNC	ENSG00000146530.15	novel	5936	30	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_20	13.728805838068	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	-12402688	True	NA	-5	True	AATAAA	-23	NA	12403937	12330884	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12354349_12354488_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12377775_12377921_12379476_12379567_12380652_12380734_12383535_12383602_12388807_12388958_12389126_12389359_12393593_12393779_12403658
WTC11_00082420	chr7	-	4402	12	FSM	ENSG00000006468.14	ENST00000405192.6	4402	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.1690577018599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGAACATTTTTCTCA	-13983935	True	NA	0	True	AATAAA	-17	NA	13989676	13893029	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
WTC11_00082421	chr7	-	3136	12	NNC	ENSG00000006468.14	novel	4181	12	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.7485499941145	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	-13988859	False	811	NA	False	TTTAAA	-14	NA	13988869	13894174	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988813
WTC11_00082424	chr7	-	8610	2	NIC	ENSG00000237921.2	novel	369	4	NA	NA	-5039	74	intron_retention	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTTTCCTCGTTTTT	NA	False	NA	-7	True	AATAAA	-26	NA	19823129	19813610	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19816315_19817223
WTC11_00082427	chr7	-	1121	7	FSM	ENSG00000243004.7	ENST00000457921.6	955	7	-166	0	-166	0	multi-exon	FALSE	canonical	3	319	junction_6	201.113290350378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20123263	False	NA	-2	True	AATAAA	-14	NA	20123282	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
WTC11_00082428	chr7	-	2114	7	NNC	ENSG00000243004.7	novel	955	7	NA	NA	-1466	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	289.215461781236	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	NA	False	NA	-2	True	AATAAA	-14	NA	20126628	19918980	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079_20125214_20125360
WTC11_00082429	chr7	-	2841	6	NIC	ENSG00000243004.7	novel	743	6	NA	NA	0	2115	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	265.407611043843	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTCTTTCTTTTCTCAT	-20121315	True	NA	1	True	AATAAA	-16	NA	20125162	19928955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19931299_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00082430	chr7	-	1843	5	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	-326	40987	-326	-16749	5prime_fragment	FALSE	canonical	3	319	junction_4	207.256483613903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTAGTCTGTTCT	-20123423	False	3847	-4	True	AATATA	-17	NA	20123442	19959967	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
WTC11_00082431	chr7	-	1467	5	ISM	ENSG00000243004.7	ENST00000415499.5	743	6	2	28897	2	-16749	5prime_fragment	FALSE	canonical	3	474	junction_1	163.325595054786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTAGTCTGTTCT	-20121313	True	NA	-4	True	AATATA	-17	NA	20125160	19959967	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
WTC11_00082432	chr7	-	1825	4	NIC	ENSG00000243004.7	novel	587	6	NA	NA	-326	1020	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	319.470742878836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCATAAGCCATTATTCA	-20123423	False	3847	NA	False	ATTAAA	-20	NA	20123442	20006084	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_20007353_20028918_20028960_20045502_20045562_20122985
WTC11_00082434	chr7	-	823	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	12	5	8	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTGACTTGATTAATTT	-20331659	True	NA	NA	False	AATAAA	-18	NA	20331769	20328300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20328857_20329366_20329514_20331649
WTC11_00082435	chr7	-	5449	3	NNC	ENSG00000164651.18	novel	1714	3	NA	NA	-91	78336	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAACTTACAGCAATGGG	NA	False	NA	NA	False	AATAAA	-29	NA	20786977	20703942	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20703986_20780980_20785796_20786386
WTC11_00082436	chr7	-	5416	3	NNC	ENSG00000164651.18	novel	1714	3	NA	NA	0	2536	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGATTTTTGCTGCTTC	-20785010	True	NA	-6	True	AATAAA	-19	NA	20786886	20779742	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20780235_20780980_20785796_20786777
WTC11_00082437	chr7	-	1947	4	FSM	ENSG00000164649.20	ENST00000488845.1	1943	4	0	-4	0	2	multi-exon	FALSE	canonical	3	1230	junction_2	89.5631372583361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTCAGTGGTATTT	-21905640	False	NA	0	True	AATAAA	-28	NA	21905709	21900896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505
WTC11_00082438	chr7	-	6851	26	FSM	ENSG00000136237.19	ENST00000665637.1	6916	26	6	59	-4	-4	multi-exon	FALSE	canonical	0	0	junction_1	2.73466634162195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTTTCTTGCTTTCTC	-22356165	True	NA	NA	False	NA	NA	NA	22357148	22118294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22122522_22125603_22125659_22131036_22131102_22136037_22136126_22136932_22136984_22140024_22140116_22145043_22145223_22146896_22147020_22150406_22150505_22154454_22154605_22156809_22156889_22157854_22157886_22160517_22160616_22162396_22162542_22167069_22167149_22193366_22193456_22193914_22194034_22219865_22219992_22230845_22230920_22266963_22267013_22291174_22291242_22308338_22308508_22309968_22310091_22315369_22315477_22317986_22318038_22356829
WTC11_00082439	chr7	-	551	2	FSM	ENSG00000196683.12	ENST00000483581.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	7026	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTCTTTTTTGAAT	-22765290	False	NA	-1	True	AATAAA	-18	NA	22818335	22812970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817999
WTC11_00082440	chr7	-	516	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	-2	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3166.90830657002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTCTTTTTTGAAT	-22769746	True	NA	-1	True	AATAAA	-18	NA	22822791	22812970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
WTC11_00082442	chr7	-	394	2	FSM	ENSG00000164548.12	ENST00000475970.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTATGCTTTGTAAAT	-23505873	False	NA	NA	False	TATAAA	-14	NA	23505885	23505315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745
WTC11_00082443	chr7	-	271	2	FSM	ENSG00000228944.1	ENST00000439839.1	527	2	20	236	20	-236	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACAAAATCAATGTT	NA	False	NA	NA	False	NA	NA	NA	24255699	24196897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24197030_24255560
WTC11_00082445	chr7	-	3287	4	NNC	ENSG00000172115.9	novel	5432	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1572.82216272392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	-25039201	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25119390_25121534_25123850_25123950_25124128_25125199
WTC11_00082446	chr7	-	2395	10	NIC	ENSG00000153790.12	novel	3770	10	NA	NA	20	-1041	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	2.05480466765633	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAGTCTTTAATCTCT	-25180212	True	NA	-3	True	AATAAA	-18	NA	25180334	25135737	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_25136794_25142240_25142333_25142639_25142815_25151595_25151685_25155010_25155193_25158500_25158531_25161188_25161261_25168288_25168466_25179174_25179333_25179970
WTC11_00082447	chr7	-	380	1	FSM	ENSG00000239622.1	ENST00000466070.1	380	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTCCTTCCCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	25689959	25689579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25689600_25690000
WTC11_00082449	chr7	-	4172	13	FSM	ENSG00000122566.22	ENST00000678035.1	4172	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	3742.88964701368	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26200092	False	NA	38	True	AAGAAA	-2	NA	26200142	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26199188
WTC11_00082450	chr7	-	4328	12	FSM	ENSG00000122566.22	ENST00000678075.1	4328	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	3795.15748429212	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26200092	False	NA	38	True	AAGAAA	-2	NA	26200142	26189665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26199188
WTC11_00082454	chr7	-	1454	2	FSM	ENSG00000225792.2	ENST00000656289.1	1574	2	0	120	0	-120	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTCTCCAAAATCTTT	-26376178	False	NA	NA	False	NA	NA	NA	26376237	26371265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26372569_26376086
WTC11_00082456	chr7	-	1235	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	0	4042	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.54835134966506	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCGGGAGCAATTTGTT	-29563359	True	NA	1	True	AATAAA	-23	NA	29563663	29510181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
WTC11_00082457	chr7	-	1208	4	NNC	ENSG00000223813.4	novel	1397	2	NA	NA	-15	4039	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.41629792788369	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563402	True	NA	-2	True	AATAAA	-20	NA	29563706	29510184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_29510641_29512811_29512984_29515056_29515318_29563387
WTC11_00082459	chr7	-	4503	14	FSM	ENSG00000106100.11	ENST00000222823.9	4503	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	3.9732835600446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGAGTCTGGAGTTTT	-30478322	True	NA	0	True	AATAAA	-19	NA	30478784	30424526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30478605
WTC11_00082460	chr7	-	1393	1	FSM	ENSG00000244480.1	ENST00000419639.1	1393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTCCAGTGGGGTCCC	NA	False	NA	NA	False	CATAAA	-36	NA	30524535	30523142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30523100_30524500
WTC11_00082463	chr7	-	636	2	FSM	ENSG00000106355.10	ENST00000468872.5	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	2525	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32487956	False	NA	-6	True	AATAAA	-16	NA	32488061	32487034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684
WTC11_00082464	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	1060.04230458034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32490758	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
WTC11_00082467	chr7	-	2968	9	FSM	ENSG00000122557.11	ENST00000311350.8	2884	9	-84	0	-84	0	multi-exon	FALSE	canonical	3	28	junction_8	18.2067123611046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	35695219	35632658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183_35694628_35694800
WTC11_00082468	chr7	-	3136	6	FSM	ENSG00000228878.9	ENST00000412856.6	3845	6	0	709	0	-255	multi-exon	FALSE	canonical	0	0	junction_5	2.13541565040626	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGGTGAGTATGAGAT	-35800562	True	NA	NA	False	NA	NA	NA	35800608	35752616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35755196_35755732_35755818_35758178_35758274_35781208_35781346_35793905_35794023_35800485
WTC11_00082469	chr7	-	425	1	FSM	ENSG00000178503.6	ENST00000320802.6	830	1	509	-104	509	104	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGACAATCTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	37585820	37585395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_37585400_37585800
WTC11_00082472	chr7	-	865	2	FSM	ENSG00000287584.1	ENST00000663389.1	1131	2	140	126	140	-126	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAGTGAGAAATAGAAT	-39623023	False	NA	NA	False	NA	NA	NA	39623061	39621378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_39621615_39622432
WTC11_00082473	chr7	-	1145	1	FSM	ENSG00000175741.5	ENST00000426392.1	563	1	-201	-381	-201	381	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAACAGTCACTCCATAG	NA	False	NA	NA	False	NA	NA	NA	39855257	39854112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_39854100_39855300
WTC11_00082475	chr7	-	947	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	0	61071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCATGGTGGTGCATG	-40122638	True	NA	NA	False	NA	NA	NA	40134622	40064955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064992_40132742_40133260_40134228
WTC11_00082476	chr7	-	946	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	0	61071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCATGGTGGTGCATG	-40122638	True	NA	NA	False	NA	NA	NA	40134622	40064955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064991_40132742_40133260_40134228
WTC11_00082477	chr7	-	8407	15	NIC	ENSG00000106571.15	novel	8237	15	NA	NA	-154	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_7	16.6034174008773	4006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	-42237607	True	NA	-5	True	AATAAA	-19	NA	42238024	41960948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42237783
WTC11_00082478	chr7	-	1705	3	NNC	ENSG00000136197.14	novel	1805	2	NA	NA	0	46344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTTGTAATCCTAGTC	-42910830	True	NA	NA	False	AAAAAG	-1	NA	42911944	42862928	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_42862955_42909272_42910922_42911914
WTC11_00082479	chr7	-	326	1	FSM	ENSG00000261019.1	ENST00000569883.1	1368	1	467	575	467	-575	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGATGTCAAGATGCCG	-42901058	False	NA	NA	False	NA	NA	NA	42902172	42901846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42901800_42902200
WTC11_00082480	chr7	-	2806	7	FSM	ENSG00000106588.12	ENST00000678407.1	2784	7	0	-22	0	0	multi-exon	FALSE	canonical	3	11145	junction_6	532.449058596219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	-42890179	True	NA	-27	True	AATAAA	-3	NA	42932174	42916881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
WTC11_00082481	chr7	-	2231	13	NNC	ENSG00000214783.9	novel	974	9	NA	NA	36	5446	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_6	153.545030492325	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTGCTTTCTTTG	-44018660	True	NA	-12	True	AATAAA	-21	NA	44019113	43960893	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_43961746_43961972_43962091_43965866_43965962_43966263_43966396_43972629_43972692_43973209_43973324_43986600_43986678_43987677_43987889_43988085_43988248_44013592_44013680_44014605_44014784_44016433_44016524_44019060
WTC11_00082484	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	2.5	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-44065369	True	NA	-1	True	AATAAA	-17	NA	44065567	44062726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44062931_44064831_44065013_44065115
WTC11_00082485	chr7	-	2748	11	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	0	-59	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	15.7990506043876	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTGCTTTCTCTA	-44081250	True	NA	-61	True	NA	NA	NA	44082478	44072120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_44073431_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00082486	chr7	-	2207	8	NIC	ENSG00000122678.17	novel	2444	10	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	21.1303051544072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGCAGTAAAGTTGACTC	-44081257	True	NA	NA	False	ATTAAA	-14	NA	44082485	44072258	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_44073378_44073624_44073709_44073782_44074026_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
WTC11_00082488	chr7	-	532	4	FSM	ENSG00000106628.12	ENST00000418438.1	556	4	24	0	24	0	multi-exon	FALSE	canonical	1	1	junction_3	865.764530471318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGTCAAAGCTGGTTAC	-44123632	False	NA	NA	False	ACTAAA	-11	NA	44123644	44117640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44117743_44117942_44118065_44121833_44122110_44123612
WTC11_00082489	chr7	-	513	5	FSM	ENSG00000106631.8	ENST00000447951.1	516	5	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_3	3.83242742918897	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGCCCAGCCCCTT	-44140829	False	NA	NA	False	NA	NA	NA	44141074	44139520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44139570_44139781_44139861_44140322_44140518_44140711_44140788_44140960
WTC11_00082490	chr7	-	3370	5	NIC	ENSG00000015676.18	novel	8036	6	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	129.600347221757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCTGCGTGTGACAT	-44487783	True	NA	-33	True	AATAAA	-17	NA	44490606	44383588	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_44386122_44392296_44392486_44427570_44427704_44484967_44485285_44490408
WTC11_00082492	chr7	-	614	2	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTATGTGACTGGTGT	-44796067	True	NA	NA	False	AATAAA	-23	NA	44796372	44795115	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_44795425_44796067
WTC11_00082493	chr7	-	887	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	27.956315128349	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	-44999372	True	NA	-3	True	AATAAA	-21	NA	44999999	44988765	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
WTC11_00082494	chr7	-	979	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	24.3246274380513	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	-44999370	True	NA	-3	True	AATAAA	-21	NA	44999997	44988765	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
WTC11_00082497	chr7	-	1256	11	ISM	ENSG00000214765.9	ENST00000338231.8	1716	13	10841	0	1295	0	3prime_fragment	FALSE	canonical	2	27	junction_1	57.3536398147493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTGCATCCTGAGC	NA	False	NA	NA	False	AATAAA	-27	NA	45758177	45723783	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042
WTC11_00082498	chr7	-	2283	13	NIC	ENSG00000214765.9	novel	1821	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	51.0185151576257	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	-45766723	True	NA	NA	False	AATAAA	-23	NA	45768964	45723787	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_45724024_45724352_45724481_45726183_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00082499	chr7	-	1584	13	NIC	ENSG00000214765.9	novel	1839	14	NA	NA	74	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	66.9097651069458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACTTATCATTGCATC	-45766584	False	NA	NA	False	AATAAA	-21	NA	45768825	45723789	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_45724024_45726183_45726237_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00082501	chr7	-	7708	31	NIC	ENSG00000136205.17	novel	7585	31	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_30	14.731674114717	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGTGAGACGGTATTT	-47582551	False	NA	-9	True	AATAAA	-17	NA	47582610	47275153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582426
WTC11_00082502	chr7	-	2329	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	26.4761095140506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCAAGAAGTTGGTG	-47976413	True	NA	-11	True	AAGAAA	-8	NA	47979614	47963297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
WTC11_00082504	chr7	-	1669	1	FSM	ENSG00000279104.1	ENST00000624154.1	1868	1	-163	362	-163	-362	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCTGAGAAGTGTAAT	NA	False	NA	NA	False	AATAAA	-25	NA	49762927	49761258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_49761300_49762900
WTC11_00082505	chr7	-	5375	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	0	-2	combination_of_known_junctions	TRUE	canonical	3	31	junction_17	164.667852752454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-50781611	True	NA	-13	True	AATAAA	-24	NA	50782910	50590064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50782423
WTC11_00082506	chr7	-	4872	16	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	200.120230528217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-50784005	True	NA	-13	True	AATAAA	-24	NA	50793437	50590064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50674435_50674659_50732271_50732369_50755886_50756057_50793223
WTC11_00082507	chr7	-	2417	17	NIC	ENSG00000106070.20	novel	2156	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	146.372811683044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50784005	True	NA	-17	True	ATTAAA	-14	NA	50793437	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50793223
WTC11_00082508	chr7	-	2865	19	NIC	ENSG00000106070.20	novel	2490	19	NA	NA	-137	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	177.857699049299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50793582	False	NA	-17	True	ATTAAA	-14	NA	50793599	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50732271_50732369_50755886_50756057_50793223
WTC11_00082509	chr7	-	4663	12	FSM	ENSG00000106078.19	ENST00000445054.5	4660	12	0	-3	0	3	multi-exon	FALSE	canonical	1	3	junction_8	18.7753134912367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	NA	False	NA	2	True	AATAAA	-20	NA	51193435	51016208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025232_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51085165_51085305_51136157_51136332_51172455_51172531_51184101_51184200_51190849_51191079_51193378
WTC11_00082512	chr7	-	1405	9	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	0	-257	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	118.332951877319	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGAGCTGCTGGGAGA	-56049656	True	NA	NA	False	NA	NA	NA	56051444	56011794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56043147_56043262_56051137
WTC11_00082513	chr7	-	1405	9	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	0	-257	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	117.958679205898	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGAGCTGCTGGGAGA	-56049656	True	NA	NA	False	NA	NA	NA	56051444	56011794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033380_56033495_56033960_56034155_56051137
WTC11_00082514	chr7	-	332	1	FSM	ENSG00000224155.2	ENST00000417282.1	849	1	285	232	285	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATATGATTTCAAAAGAA	NA	False	NA	NA	False	AAGAAA	-37	NA	56305241	56304909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56304900_56305200
WTC11_00082515	chr7	-	3305	5	NIC	ENSG00000173041.12	novel	2993	4	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	27.806249297595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTATTGTGCATTCA	-64560991	True	NA	-5	True	ATTAAA	-16	NA	64563059	64519881	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_64522501_64543706_64543803_64544305_64544433_64560945_64561274_64562924
WTC11_00082516	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.2807651352991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	-64560973	True	NA	NA	False	NA	NA	NA	64563041	64524698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
WTC11_00082517	chr7	-	784	1	FSM	ENSG00000270948.1	ENST00000605323.1	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTCACAGTTTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	64942926	64942142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64942100_64942900
WTC11_00082520	chr7	-	482	2	NNC	ENSG00000213462.5	novel	358	2	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAGAGCACCAAGCTAT	-65003974	True	NA	-18	True	ATTAAA	-27	NA	65006659	65006084	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_65006448_65006540
WTC11_00082521	chr7	-	2048	12	NNC	ENSG00000169919.17	novel	2199	12	NA	NA	0	62606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.6493433675937	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTACAAATTTACTGTA	-65977874	True	NA	NA	False	NA	NA	NA	65982196	65898077	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_65898107_65960693_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
WTC11_00082522	chr7	-	2019	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_6	53.2413373235496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	-65977864	True	NA	-7	True	AATAAA	-29	NA	65982186	65960683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
WTC11_00082523	chr7	-	4162	2	ISM	ENSG00000179406.9	ENST00000416572.1	556	4	13464	-3766	9087	-17	3prime_fragment	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATTTCTGTTTTATTT	NA	False	NA	-6	True	AATAAA	-18	NA	66382455	66376060	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66380004_66382236
WTC11_00082528	chr7	-	2040	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92100	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	18.2999696417477	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-72735923	False	NA	-5	True	AATAAA	-18	NA	72736074	72574512	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
WTC11_00082530	chr7	-	1152	8	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_4	197.127846219407	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATGCAGAACGTAC	-72953835	True	NA	-30	True	NA	NA	NA	72954706	72948321	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
WTC11_00082531	chr7	-	1538	12	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	178.24089929592	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTCCTTCCTGGTGGG	-72953835	True	NA	NA	False	NA	NA	NA	72954706	72948472	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
WTC11_00082534	chr7	-	1742	12	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	3	-10	intron_retention	FALSE	canonical	2	9	junction_7	193.491537816545	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCACATAGCAGAGGCTCC	-72953832	True	NA	NA	False	AAAAAG	-26	NA	72954703	72948494	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72950285_72950445_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
WTC11_00082537	chr7	-	1487	10	NIC	ENSG00000130305.17	novel	2336	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_8	183.139897952964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-73304379	True	NA	-7	True	AATAAA	-22	NA	73308800	73303224	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307644_73308430_73308554_73308697
WTC11_00082539	chr7	-	1525	11	NNC	ENSG00000130305.17	novel	2336	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	167.233848248493	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-73304379	True	NA	-11	True	AATAAA	-18	NA	73308800	73303228	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_73303530_73303599_73303741_73303825_73303915_73303986_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
WTC11_00082542	chr7	-	3260	17	FSM	ENSG00000009950.16	ENST00000313375.8	3252	17	0	-8	0	0	multi-exon	FALSE	canonical	2	8	junction_7	6.13360365119886	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTGCTGGTCAGTG	-73623420	True	NA	-3	True	AATAAA	-22	NA	73624522	73593193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
WTC11_00082544	chr7	-	524	1	FSM	ENSG00000274080.1	ENST00000619486.1	2241	1	1354	363	1354	-363	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGGCAACAGATTCA	NA	False	NA	NA	False	NA	NA	NA	73610148	73609624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73609600_73610100
WTC11_00082545	chr7	-	2183	11	NNC	ENSG00000106089.12	novel	2102	10	NA	NA	0	67647	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.2064378240311	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCAACATCCTTCATAGC	-73719028	False	NA	NA	False	NA	NA	NA	73719631	73631558	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_73631587_73699209_73700485_73700729_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
WTC11_00082546	chr7	-	1477	2	FSM	ENSG00000106089.12	ENST00000484736.5	928	2	0	-549	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTGTTGTAGATT	-73700920	False	NA	-5	True	AATAAA	-15	NA	73700931	73699209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73700485_73700729
WTC11_00082548	chr7	-	997	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	-6	-69	-6	69	multi-exon	FALSE	canonical	2	6	junction_5	3.13687742827162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACAATTTGGAAGGCCAA	-73842246	True	NA	64	True	NA	NA	NA	73842522	73834520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
WTC11_00082550	chr7	-	226	1	FSM	ENSG00000238391.1	ENST00000459153.1	113	1	62	-175	62	175	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGCGA	NA	False	NA	NA	False	NA	NA	NA	74487478	74487252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74487300_74487500
WTC11_00082553	chr7	-	2394	11	FSM	ENSG00000274523.5	ENST00000614461.4	2419	11	25	0	25	0	multi-exon	FALSE	canonical	2	4	junction_1	104.312463301372	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCCGCGTGTATGG	-75069550	True	NA	NA	False	ATTAAA	-16	NA	75073856	75027121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75028080_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
WTC11_00082554	chr7	-	1203	9	FSM	ENSG00000274523.5	ENST00000618035.4	1409	9	25	181	25	-181	multi-exon	FALSE	canonical	1	2	junction_1	116.861830808866	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCAAACCTCTGGAGTG	-75069550	True	NA	NA	False	NA	NA	NA	75073856	75056697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75056725_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
WTC11_00082556	chr7	-	449	3	NNC	ENSG00000278416.1	novel	1128	7	NA	NA	7529	80	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCCTGGGTCCGGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	75352021	75343934	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75344109_75348696_75348786_75351835
WTC11_00082560	chr7	-	8009	31	FSM	ENSG00000127946.17	ENST00000336926.11	8009	31	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_30	25.7592486087791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCGTGGTGGTGATTGA	-75738399	True	NA	-3	True	AATAAA	-17	NA	75738941	75533297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75738800
WTC11_00082561	chr7	-	488	3	FSM	ENSG00000006606.9	ENST00000005180.9	475	3	0	-13	0	8	multi-exon	FALSE	canonical	3	240	junction_2	15.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTTTTTGTCCATAAA	-75772090	True	NA	-4	True	AATAAA	-27	NA	75772211	75769524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75769790_75771888_75772004_75772103
WTC11_00082562	chr7	-	619	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1503	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	103.776469180424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATAACATTTTTTGTC	NA	False	NA	-10	True	AATAAA	-21	NA	75788393	75769530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788299
WTC11_00082563	chr7	-	2256	8	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	11	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	25.4638599443467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTTTGAGCACAAAT	-76408133	True	NA	-4	True	AATAAA	-29	NA	76409686	76389328	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76409413
WTC11_00082564	chr7	-	2808	11	FSM	ENSG00000146700.9	ENST00000275560.4	2800	11	0	-8	0	5	multi-exon	FALSE	canonical	3	19	junction_8	22.8481946770418	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTTTGAGCACAAAT	-76408144	True	NA	-4	True	AATAAA	-29	NA	76409697	76389328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76401007_76401044_76404306_76404506_76409413
WTC11_00082566	chr7	-	499	5	FSM	ENSG00000186088.16	ENST00000474686.5	825	5	326	0	326	0	multi-exon	FALSE	canonical	1	2	junction_2	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCCATTTTAATCTTG	NA	False	NA	NA	False	AAAAAG	-19	NA	77314489	77311334	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77311450_77311840_77311941_77312100_77312203_77313487_77313550_77314369
WTC11_00082567	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	44	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-77694708	True	NA	-36	True	NA	NA	NA	77696255	77681606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77684252_77685201_77685329_77696171
WTC11_00082570	chr7	-	6690	21	NIC	ENSG00000187391.22	novel	4599	22	NA	NA	-9	0	intron_retention	TRUE	canonical	0	0	junction_9	15.0607934717929	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCTGTGTGTTAATTT	-78770383	True	NA	-1	True	AATAAA	-35	NA	78771332	78017056	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_78019977_78078946_78079086_78125693_78125838_78127196_78127417_78132888_78133061_78135020_78135207_78160024_78160274_78167915_78168109_78178010_78178103_78185628_78185671_78194873_78195064_78201161_78201194_78255942_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
WTC11_00082571	chr7	-	3929	11	ISM	ENSG00000075223.14	ENST00000265361.8	4874	18	114828	0	-5985	0	3prime_fragment	FALSE	canonical	3	7	junction_5	2.82134719593318	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAGCTTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	80804223	80742537	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_80745308_80748897_80749029_80751268_80751337_80758330_80758489_80761615_80761658_80765154_80765244_80789305_80789529_80798091_80798237_80800756_80800827_80802664_80802780_80804105
WTC11_00082572	chr7	-	2006	5	FSM	ENSG00000019991.18	ENST00000423064.7	2021	5	6	9	6	-9	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACAAGTCTGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	81770130	81750897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_81752263_81757188_81757304_81758691_81758805_81762706_81762873_81769883
WTC11_00082573	chr7	-	3858	39	FSM	ENSG00000153956.16	ENST00000356253.9	3858	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	15.9865984386889	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACATGTGAAAGGGTTC	-82443704	False	NA	NA	False	NA	NA	NA	82443715	81950101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_81950509_81959274_81959358_81959719_81959830_81961893_81962024_81962439_81962496_81964055_81964109_81964206_81964360_81965593_81965666_81967168_81967208_81967595_81967664_81968886_81968974_81969880_81969985_81970674_81970738_81971776_81971865_81974454_81974553_81982566_81982628_81984634_81984712_81991184_81991247_81994867_81994940_81997178_81997251_82001658_82001716_82005422_82005498_82005764_82005840_82007678_82007757_82012153_82012244_82013460_82013511_82014400_82014480_82032796_82032902_82038076_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
WTC11_00082575	chr7	-	3772	2	FSM	ENSG00000186472.20	ENST00000437081.1	3786	2	0	14	0	-14	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATAGTTGAAAAGTTTTT	NA	False	NA	-18	True	AATAAA	-19	NA	82950748	82914374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_82916874_82949475
WTC11_00082576	chr7	-	5327	1	Genic_Genomic	ENSG00000170381.14	novel	NA	NA	NA	NA	-3189	30165	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCAGCGAAGGGAGATA	NA	False	NA	NA	False	NA	NA	NA	83465349	83460022	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_83460000_83465300
WTC11_00082577	chr7	-	4685	23	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19292	930	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_22	44.3944565074857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTGAAGGTGGT	-87038093	True	NA	-21	True	AATGAA	-14	NA	87040223	86879008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87039755_87039872_87040017
WTC11_00082578	chr7	-	2962	21	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19292	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_20	40.4309287551003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGTAGAATTTTAACC	-87038093	True	NA	NA	False	AATAAA	-40	NA	87040223	86891723	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87040102
WTC11_00082582	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	2	8	junction_1	36.0647565729573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	-87343561	True	NA	NA	False	NA	NA	NA	87345447	87325114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
WTC11_00082583	chr7	-	903	4	FSM	ENSG00000075142.14	ENST00000472930.6	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	2409	junction_3	109.106471953877	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGTCTGTTACACCAT	-88181465	False	NA	-18	True	AATAAA	-20	NA	88210493	88206285	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982
WTC11_00082586	chr7	-	889	3	FSM	ENSG00000223969.7	ENST00000415965.5	317	3	-574	2	-432	-1	multi-exon	FALSE	canonical	2	4	junction_2	3	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGGAATCATTGCTAC	-90596288	False	NA	0	True	AATAAA	-16	NA	90596322	90590620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_90590729_90591715_90591902_90595727
WTC11_00082587	chr7	-	4646	18	ISM	ENSG00000001631.17	ENST00000692157.1	4040	19	43	1	3	-1	intron_retention	FALSE	canonical	3	43	junction_17	20.9870614285289	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATAAGTTCAGAGATAT	-92243191	True	NA	-30	True	AATAAA	-11	NA	92245871	92199420	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901
WTC11_00082591	chr7	-	6863	7	ISM	ENSG00000105810.10	ENST00000265734.8	11612	8	2	4929	2	4864	intron_retention	FALSE	canonical	3	60	junction_4	4.6785562825394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGAAAGCCTAGTCATT	-92833903	False	1628	NA	False	AATAAA	-43	NA	92833915	92609849	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090
WTC11_00082593	chr7	-	397	1	FSM	ENSG00000237729.2	ENST00000425207.1	252	1	-80	-65	-80	65	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAAAGATTTGGGCCT	NA	False	NA	NA	False	AATAAA	-24	NA	93670157	93669760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93669800_93670200
WTC11_00082597	chr7	-	708	1	FSM	ENSG00000232385.2	ENST00000411660.1	793	1	146	-61	146	61	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAAGAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	94695673	94694965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94695000_94695700
WTC11_00082599	chr7	-	520	4	NNC	ENSG00000127922.10	novel	458	3	NA	NA	-11	6415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3496.54327713656	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTCAAAAAATAACCC	-96654325	True	NA	NA	False	AATAGA	-41	NA	96709891	96615241	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_96615267_96688769_96688967_96694797_96694892_96709687
WTC11_00082601	chr7	-	1953	12	FSM	ENSG00000070669.17	ENST00000454046.5	1947	12	0	-6	0	3	multi-exon	FALSE	canonical	1	1	junction_4	161.120405672177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTAGTCATTTATGTT	-97864502	False	NA	-2	True	AATAAA	-19	NA	97869813	97852124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854755_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777
WTC11_00082602	chr7	-	2281	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	11	-3	-7	3	multi-exon	FALSE	canonical	3	9	junction_12	153.276144226324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTAGTCATTTATGTT	-97866809	False	5311	-2	True	AATAAA	-19	NA	97872120	97852124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
WTC11_00082604	chr7	-	219	1	FSM	ENSG00000284627.1	ENST00000641908.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	-97928120	False	NA	NA	False	NA	NA	NA	97928300	97928081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97928100_97928300
WTC11_00082612	chr7	-	355	2	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGATGTTTGTTATT	NA	False	NA	3	True	AATAAA	-26	NA	98470693	98469341	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_98469536_98470532
WTC11_00082615	chr7	-	5724	18	NNC	ENSG00000198742.10	novel	5668	18	NA	NA	-61	4	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	30.1022479014396	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTCTGTTATTTTGG	-99142361	True	NA	-13	True	AATAAA	-17	NA	99144169	99027435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99030684_99033036_99033113_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
WTC11_00082617	chr7	-	1319	7	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	0	47135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	286.890029260149	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTAGGAATCCTACA	-99361807	True	NA	NA	False	AAAAAG	-8	NA	99408590	99344912	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99344950_99395987_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
WTC11_00082620	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99929523	False	97	0	True	AATAAA	-20	NA	99929620	99923265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99923604_99928839
WTC11_00082621	chr7	-	1192	3	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4655	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	15.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99934165	False	110	0	True	AATAAA	-20	NA	99934275	99923265	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99923604_99928839_99929622_99934203
WTC11_00082626	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	282.070813586856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	-100119601	False	240	-41	True	NA	NA	NA	100119841	100107167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
WTC11_00082630	chr7	-	3353	3	FSM	ENSG00000197093.11	ENST00000495882.1	3162	3	-186	-5	-156	5	multi-exon	FALSE	canonical	3	31	junction_1	9	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATGGAGGGTGGAAAG	-100164330	False	NA	-1	True	AATAAA	-20	NA	100168298	100159238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100160960_100166501_100166806_100166970
WTC11_00082633	chr7	-	4019	7	ISM	ENSG00000239521.10	ENST00000328453.9	3526	8	14	8283	-5	2648	5prime_fragment	FALSE	canonical	1	1	junction_1	21.4372469210847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTAAGTGTATCTTTT	-100270940	True	NA	-4	True	AATAAA	-17	NA	100272192	100208935	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100211995_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
WTC11_00082634	chr7	-	1029	4	FSM	ENSG00000239521.10	ENST00000689058.1	856	4	-177	4	5	-4	multi-exon	FALSE	canonical	3	53	junction_1	4.24264068711928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTGGTGCATATT	-100270949	True	NA	-4	True	AATACA	-9	NA	100272201	100223298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100223699_100223881_100224076_100233603_100233675_100271837
WTC11_00082640	chr7	-	754	2	FSM	ENSG00000224729.6	ENST00000653812.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGGAGGTGGGGTGGT	-100601759	False	NA	NA	False	NA	NA	NA	100601857	100600336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100600853_100601619
WTC11_00082646	chr7	-	632	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2930	-3	2775	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100891217	True	NA	-4	True	AATAAA	-13	NA	100891458	100889993	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100890336_100891168
WTC11_00082647	chr7	-	2932	5	FSM	ENSG00000087085.16	ENST00000411582.4	2928	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_4	8.86002257333467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100895709	True	NA	-4	True	AATAAA	-13	NA	100895892	100889993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100891089_100891168_100891339_100892333_100892819_100893164_100894256_100895801
WTC11_00082648	chr7	-	451	4	NNC	ENSG00000227053.2	novel	442	3	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.006171781426	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-101016975	True	NA	-1	True	AATAAA	-21	NA	101017506	101014319	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_101014440_101015197_101015268_101015439_101015609_101017414
WTC11_00082650	chr7	-	644	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	-13	0	0	multi-exon	FALSE	canonical	1	6	junction_3	304.521847419123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101231831	True	NA	14	True	AATAAA	-39	NA	101245048	101239593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
WTC11_00082652	chr7	-	1607	9	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	601.119983343592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572351	False	NA	-19	True	AATAAA	-16	NA	102572519	102537918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572442
WTC11_00082653	chr7	-	1979	11	NNC	ENSG00000168255.20	novel	1598	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	569.503336250105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572375	True	NA	-19	True	AATAAA	-16	NA	102572543	102537918	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524_102543831_102544705_102544777_102566996_102567084_102568009_102568185_102569834_102569925_102572471
WTC11_00082656	chr7	-	544	5	FSM	ENSG00000285437.2	ENST00000608621.5	544	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	808.749188562189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCCTGGTGTCTGCC	-102572415	True	NA	NA	False	NA	NA	NA	102572583	102562132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102562213_102566996_102567084_102568009_102568185_102569834_102569925_102572471
WTC11_00082659	chr7	-	1997	9	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	40	24	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	296.02871482341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670407	False	NA	-1	True	AATAAA	-16	NA	102671601	102637024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102666164_102667089_102667265_102668914_102669005_102671551
WTC11_00082660	chr7	-	1074	6	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	0	24	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	203.950386123685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670447	True	NA	-1	True	AATAAA	-16	NA	102671641	102637024	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102666076_102666164_102668914_102669005_102671551
WTC11_00082663	chr7	-	731	1	FSM	ENSG00000224415.1	ENST00000432746.1	591	1	-78	-62	-78	62	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCCTTTATCTGCTTG	-103141996	False	NA	NA	False	ATTAAA	-5	NA	103142017	103141286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103141300_103142000
WTC11_00082664	chr7	-	1538	2	NNC	ENSG00000228393.5	novel	1061	2	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCTCAGTGCAATTTT	-105013113	False	NA	-5	True	AATAAA	-15	NA	105013139	104981747	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_104982692_105012545
WTC11_00082666	chr7	-	733	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	4	0	-3	0	multi-exon	FALSE	canonical	2	22	junction_1	6.53834841531101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-105581200	True	NA	-15	True	AATAAA	-1	NA	105581489	105565123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
WTC11_00082668	chr7	-	2775	10	ISM	ENSG00000146776.15	ENST00000419735.8	5707	12	127	8701	5	1	5prime_fragment	FALSE	canonical	3	23	junction_7	43.5456337905676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGATCTGATCTGTTG	-105875587	True	NA	-2	True	ATTAAA	-17	NA	105876472	105613472	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
WTC11_00082669	chr7	-	543	2	FSM	ENSG00000008282.9	ENST00000460770.1	545	2	2	0	2	0	multi-exon	FALSE	canonical	3	565	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGTGGGTTTAAAACT	-106093215	False	NA	-14	True	AATAAA	-19	NA	106093250	106091698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106091940_106092948
WTC11_00082670	chr7	-	5982	5	FSM	ENSG00000105835.13	ENST00000681372.1	5972	5	0	-10	0	0	multi-exon	FALSE	canonical	3	538	junction_3	14.8744747806435	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	-106267815	False	NA	-21	True	ATTAAA	-18	NA	106267826	106250042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391
WTC11_00082672	chr7	-	5612	2	FSM	ENSG00000105835.13	ENST00000463871.2	5612	2	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	-106257455	False	NA	-21	True	ATTAAA	-18	NA	106257477	106250042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016
WTC11_00082677	chr7	-	5317	33	FSM	ENSG00000091136.15	ENST00000677588.1	5332	33	16	-1	6	1	multi-exon	FALSE	canonical	1	2	junction_9	72.1702022024152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTACTTGTTACTTT	-107997879	True	NA	0	True	AATAAA	-22	NA	108003197	107923797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
WTC11_00082678	chr7	-	5691	34	FSM	ENSG00000091136.15	ENST00000678704.1	5706	34	16	-1	6	1	multi-exon	FALSE	canonical	1	1	junction_23	71.2221269566399	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTACTTGTTACTTT	-107997879	True	NA	0	True	AATAAA	-22	NA	108003197	107923797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975229_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
WTC11_00082684	chr7	-	5683	5	ISM	ENSG00000146802.13	ENST00000454074.5	2659	6	13	-1422	-1	1422	intron_retention	FALSE	canonical	3	16	junction_4	48.8722825331496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCATGTTTTAGAGTTCA	-112788924	True	NA	59	True	ATTAAA	-19	NA	112790380	112765662	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112788453
WTC11_00082689	chr7	-	2827	9	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	65.1046033318689	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120856535	True	NA	-2	True	AATAAA	-18	NA	120858143	120787319	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120814004_120814248_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
WTC11_00082695	chr7	-	3113	24	NIC	ENSG00000008311.16	novel	5825	24	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_10	1378.68596653804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATGCTATTTGTTAAT	-122099913	True	NA	-24	True	TATAAA	-18	NA	122144237	122076244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098748_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
WTC11_00082697	chr7	-	1609	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	15	-120	15	0	multi-exon	FALSE	canonical	3	58	junction_3	1159.00685454784	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGC	-123542396	True	NA	85	True	NA	NA	NA	123557889	123540909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
WTC11_00082700	chr7	-	3035	19	FSM	ENSG00000128513.16	ENST00000664330.1	3035	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	25.077411014893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTTAATATTAGTGAAGA	-124929640	False	NA	-41	True	TATAAA	-6	NA	124929858	124823296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124848539_124848660_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
WTC11_00082706	chr7	-	1918	5	FSM	ENSG00000219445.2	ENST00000420224.1	1918	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACCACCTTGTGAAGAA	-125262803	True	NA	NA	False	TTTAAA	-31	NA	125264291	125229578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_125230842_125246343_125246531_125248300_125248442_125249979_125250058_125264042
WTC11_00082715	chr7	-	2660	16	NIC	ENSG00000106348.18	novel	2611	17	NA	NA	4	0	intron_retention	FALSE	canonical	1	15	junction_15	103.880615237985	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	-128408977	True	NA	-2	True	AATAAA	-27	NA	128409943	128392276	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409485_128409755
WTC11_00082735	chr7	-	1453	5	NNC	ENSG00000105894.12	novel	1482	5	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	79.4433760611922	96	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTGTTTTTGTGTT	-137343645	False	NA	NA	False	AATAAA	-18	NA	137343713	137227346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_137228073_137251229_137251392_137253463_137253638_137254858_137254975_137343438
WTC11_00082739	chr7	-	6760	21	NNC	ENSG00000122778.10	novel	12498	20	NA	NA	-70	-5727	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	10.8824399837536	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTGTATTTGCTGT	-138981441	False	NA	-11	True	AATACA	-21	NA	138981459	138837107	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_138838161_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138917042_138917122_138919439_138981082
WTC11_00082746	chr7	-	2885	11	NIC	ENSG00000059378.13	novel	3021	12	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	3.44093010681705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGACTGAAGCTCATT	-140062261	True	NA	-11	True	AATAAA	-20	NA	140062943	140023745	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_140024886_140026196_140026349_140028612_140028689_140034234_140034332_140037714_140037857_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
WTC11_00082753	chr7	-	3874	20	FSM	ENSG00000146966.13	ENST00000496613.6	3874	20	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_19	12.1242414161422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	-140640373	True	NA	28	True	ATTAAA	-14	NA	140640813	140518419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140605704_140605807_140640503
WTC11_00082755	chr7	-	1185	3	FSM	ENSG00000157764.14	ENST00000469930.2	1180	3	0	-5	0	2	multi-exon	FALSE	canonical	3	60	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAAATTTTTCATTTTTT	-140924705	False	NA	-7	True	AATAAA	-20	NA	140924742	140833966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140834873_140850110_140850213_140924565
WTC11_00082761	chr7	-	6722	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	1	993	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	29.8663690461362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATCCACTTTTGTGTGA	-143900203	True	NA	NA	False	ATTAAA	-17	NA	143902125	143850381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
WTC11_00082764	chr7	-	7683	14	Fusion	ENSG00000289604.1_ENSG00000204959.4	novel	4532	12	NA	NA	-7234	0	multi-exon	FALSE	canonical	0	0	junction_9	188.244301798921	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGAGTAAATCATTTC	-144293864	True	NA	NA	False	AATAAA	-18	NA	144294200	144266673	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_144269732_144272444_144272516_144273959_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144294117
WTC11_00082765	chr7	-	5106	12	NNC	ENSG00000204959.4	novel	4532	12	NA	NA	-7254	-983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	159.871694423015	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTGAGAGTATTAA	NA	False	NA	NA	False	AATAAA	-23	NA	144294220	144273427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144294117
WTC11_00082766	chr7	-	5935	14	Fusion	ENSG00000244479.7_ENSG00000204959.4	novel	4532	12	NA	NA	31	-987	intron_retention	FALSE	canonical	0	0	junction_6	193.023774480743	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATACATTTTTGAGAGTA	-144355225	False	NA	NA	False	AATAAA	-19	NA	144355370	144273431	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812_144286979_144311590_144311705_144311883_144311937_144343186_144343299_144355337
WTC11_00082771	chr7	-	3521	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	1	2855	combination_of_known_splicesites	FALSE	canonical	3	277	junction_3	177.571268947303	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCTGTTTATTTTGAAC	-144355073	False	NA	NA	False	AATATA	-18	NA	144355218	144333912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
WTC11_00082772	chr7	-	5938	2	NNC	ENSG00000244479.7	novel	773	4	NA	NA	1642	2777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATGTATAAGTAAGTT	-144341636	False	NA	NA	False	NA	NA	NA	144341657	144333990	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_144337694_144339422
WTC11_00082773	chr7	-	3232	5	NNC	ENSG00000244479.7	novel	773	4	NA	NA	5	2444	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	294.787529417375	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTAATATGGTAGT	-144355069	False	NA	NA	False	ATTAAA	-23	NA	144355214	144334323	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_144336978_144343186_144343299_144350717_144350825_144351119_144351246_144354981
WTC11_00082774	chr7	-	3003	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	1	2444	combination_of_known_junctions	FALSE	canonical	3	172	junction_2	173.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTAATATGGTAGT	-144355073	False	NA	NA	False	ATTAAA	-23	NA	144355218	144334323	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144354981
WTC11_00082775	chr7	-	2798	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	32	2444	combination_of_known_junctions	FALSE	canonical	3	519	junction_1	93	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAGTAATATGGTAGT	-144355224	False	NA	NA	False	ATTAAA	-23	NA	144355369	144334323	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144355337
WTC11_00082779	chr7	-	549	2	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAATCTGCTTTAAGA	-146245464	True	NA	-6	True	AATAAA	-20	NA	146248907	146215929	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146216239_146248667
WTC11_00082784	chr7	-	2331	18	NIC	ENSG00000106462.12	novel	2591	20	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	81.663246403439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATCATCTCTCATA	-148877887	True	NA	-17	True	AATAAA	-19	NA	148884235	148807381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148884163
WTC11_00082785	chr7	-	2322	18	NIC	ENSG00000106462.12	novel	2535	20	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_17	104.938142926347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATCATCTCTCATA	-148877913	True	NA	-17	True	AATAAA	-19	NA	148884261	148807381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148884163
WTC11_00082786	chr7	-	2430	19	NIC	ENSG00000106462.12	novel	2466	20	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	96.4987846146197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATCATCTCTCATA	-148877924	True	NA	-17	True	AATAAA	-19	NA	148884272	148807381	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846599_148847181_148847306_148884163
WTC11_00082796	chr7	-	2525	9	ISM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	31	0	0	intron_retention	FALSE	canonical	3	353	junction_8	50.3846144671168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTCTCATTAAAGTTC	-151071359	False	9450	-3	True	NA	NA	NA	151080809	151076654	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499
WTC11_00082800	chr7	-	1905	5	FSM	ENSG00000187260.16	ENST00000628331.1	1905	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	27.0832051279017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-151409161	True	NA	-1	True	AATATA	-21	NA	151410038	151381120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151381747_151381877_151381982_151395775_151396197_151400099_151400242_151409426
WTC11_00082803	chr7	-	1567	9	NNC	ENSG00000106615.10	novel	1153	9	NA	NA	34	22042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	780.474975575771	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGGCGTGGTGGCACA	-151519986	True	NA	NA	False	NA	NA	NA	151520086	151443969	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151443997_151466708_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
WTC11_00082804	chr7	-	2891	16	FSM	ENSG00000106617.15	ENST00000287878.9	3279	16	391	-3	64	0	multi-exon	FALSE	canonical	0	0	junction_13	67.862475312617	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	-151876710	False	NA	1	True	ATTAAA	-21	NA	151876724	151556123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068_151632139_151675419_151675638_151781151_151781432_151786469_151786542_151876506
WTC11_00082808	chr7	-	14289	31	FSM	ENSG00000055609.21	ENST00000360104.8	14292	31	0	3	0	0	multi-exon	FALSE	canonical	2	5	junction_24	19.9139537901331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCCTAGAGCTTCTGT	NA	False	NA	-7	True	AATAAA	-18	NA	152194568	152134924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152138905_152139185_152139260_152139674_152139792_152144712_152144882_152145164_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156347_152157760_152157926_152158862_152159073_152162116_152163827_152167145_152167379_152169185_152169250_152171263_152171343_152174130_152174243_152176190_152178011_152179833_152180127_152180710_152182595_152182973_152183157_152185557_152185632_152187261_152187477_152187714_152187848_152194008_152194129_152194228_152194262_152194439
WTC11_00082809	chr7	-	5895	17	FSM	ENSG00000055609.21	ENST00000681923.1	5895	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	20.1602951367285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCATTTACAAATAAAATA	-152162413	False	NA	-41	True	NA	NA	NA	152162429	152134958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152136925_152138795_152138905_152139185_152139260_152139674_152139792_152144712_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156344_152157760_152157926_152158862_152159073_152162116
WTC11_00082816	chr7	-	3990	22	FSM	ENSG00000157212.19	ENST00000457196.5	3990	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.9305423796251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-155001393	True	NA	-6	True	AATAAA	-20	NA	155003084	154943686	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_154944165_154946364_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986016_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00082818	chr7	-	3815	21	NNC	ENSG00000157212.19	novel	3864	21	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.0440245457068	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGTAATCCTTTATTAT	-155001384	True	NA	-7	True	AATAAA	-19	NA	155003075	154943687	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_154944160_154946361_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00082826	chr7	+	255	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGATTAAGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	6959566	6959821	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_6959600_6959800
WTC11_00082827	chr7	+	654	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	13729828	13730482	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_13729800_13730500
WTC11_00082828	chr7	+	356	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTTCATAAATTATGAG	NA	False	NA	NA	False	NA	NA	NA	21691171	21691527	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_21691200_21691500
WTC11_00082830	chr7	+	249	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCGCCTCTGAAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	29787070	29787319	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_29787100_29787300
WTC11_00082831	chr7	+	234	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCGAGCTTAATGTGTAG	NA	False	NA	NA	False	NA	NA	NA	32839219	32839453	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_32839200_32839500
WTC11_00082832	chr7	+	2411	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAGGGTCAGTCCAAGT	NA	False	NA	NA	False	NA	NA	NA	42870611	42873022	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_42870600_42873000
WTC11_00082833	chr7	+	313	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGCTATTTTTAAGAC	NA	False	NA	NA	False	NA	NA	NA	46326881	46327194	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_46326900_46327200
WTC11_00082834	chr7	+	2481	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCCATCTGACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	55453564	55456045	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_55453600_55456000
WTC11_00082835	chr7	+	2443	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTACAGGTGCCCACCA	NA	False	NA	NA	False	NA	NA	NA	65720425	65722868	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_65720400_65722900
WTC11_00082836	chr7	+	400	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATTTTTGAAGTATGTT	NA	False	NA	NA	False	NA	NA	NA	66706690	66707090	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_66706700_66707100
WTC11_00082859	chr7	+	2391	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCGTGGAATAAATAACA	198278	False	NA	NA	False	AATAAA	-15	NA	198289	200680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_198300_200700
WTC11_00082860	chr7	+	4043	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	132.709939257914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	816558	False	NA	6	True	AATAAA	-19	NA	816573	874899	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00082862	chr7	+	4062	20	FSM	ENSG00000164828.18	ENST00000405266.5	4062	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	140.104867728494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGGGATATAAACAGTC	NA	False	NA	7	True	AATAAA	-20	NA	832500	874900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
WTC11_00082864	chr7	+	3797	6	FSM	ENSG00000230487.9	ENST00000457484.6	3839	6	42	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_4	7.69415362466854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCATAACTCTCCATC	1569652	True	NA	NA	False	AATAAA	-14	NA	1570130	1589621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570534_1574714_1574864_1575786_1575889_1583161_1583270_1584383_1585618_1587820
WTC11_00082865	chr7	+	5643	4	FSM	ENSG00000230487.9	ENST00000437621.6	5701	4	58	0	-4	0	multi-exon	FALSE	canonical	1	5	junction_3	6.59966329107444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAACTCTCCATCCTTCT	1569652	True	NA	NA	False	AATAAA	-19	NA	1570130	1589626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1584383
WTC11_00082867	chr7	+	3415	20	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_12	885.085916921295	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2353814	True	NA	25	True	AATAAA	-15	NA	2354094	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2354196_2354523_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380283
WTC11_00082868	chr7	+	2845	20	NIC	ENSG00000106263.19	novel	2966	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	764.927617744197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2322467	True	NA	25	True	AATAAA	-15	NA	2354880	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
WTC11_00082869	chr7	+	2887	20	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	763.690130195781	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	2322467	True	NA	25	True	AATAAA	-15	NA	2354880	2380740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355084_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
WTC11_00082870	chr7	+	2805	19	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	11	-9	intron_retention	FALSE	canonical	0	0	junction_11	776.374140189867	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTATGAAAAACCGGTC	2322479	True	NA	16	True	AATAAA	-6	NA	2354892	2380731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380414
WTC11_00082871	chr7	+	15347	2	FSM	ENSG00000136213.10	ENST00000618655.2	15985	2	0	638	0	-4	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGGAGAGCAGCCTGAA	2401722	True	NA	NA	False	AATAAA	-13	NA	2403610	2447846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2403674_2432562
WTC11_00082872	chr7	+	4797	15	NIC	ENSG00000136295.15	novel	4805	14	NA	NA	2	-105	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	456.565556237937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGGGCTTTTTTTCTT	2622788	True	NA	-4	True	GGGGCT	-12	NA	2631987	2664695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2659939_2660041_2661667
WTC11_00082873	chr7	+	609	1	FSM	ENSG00000224593.1	ENST00000439177.1	601	1	-8	0	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGGTTCAGCTGAAGA	NA	False	NA	NA	False	AAAAAG	-21	NA	3337880	3338489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3337900_3338500
WTC11_00082874	chr7	+	238	1	FSM	ENSG00000286874.1	ENST00000667321.1	323	1	-32	117	-32	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCGAACCTGGGGGCG	4642182	False	NA	NA	False	NA	NA	NA	4642215	4642453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4642200_4642500
WTC11_00082875	chr7	+	1329	3	ISM	ENSG00000164916.11	ENST00000328914.5	11194	9	12	16403	12	-12	5prime_fragment	FALSE	canonical	3	31	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCCATGAGGCAAAAAT	4681552	True	NA	NA	False	AATAAA	-12	NA	4682306	4755039	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_4682869_4740837_4741024_4754458
WTC11_00082876	chr7	+	1163	7	FSM	ENSG00000242802.9	ENST00000647628.1	1027	7	-136	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	11.1716406832459	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTGTGACACAAGACGG	4783296	False	NA	NA	False	NA	NA	NA	4783322	4786653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249
WTC11_00082878	chr7	+	4125	6	FSM	ENSG00000146587.18	ENST00000353796.7	4125	6	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	23.5423023512995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAAAAGAATATAAATCT	5044132	True	NA	NA	False	AGTAAA	-10	NA	5045820	5067257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5045959_5046254_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
WTC11_00082880	chr7	+	955	1	FSM	ENSG00000273084.1	ENST00000608012.1	942	1	-151	138	-151	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCGCGAGCGTGTTTTT	5428449	False	NA	NA	False	AAAACA	-31	NA	5428579	5429534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5428600_5429500
WTC11_00082881	chr7	+	569	4	FSM	ENSG00000235944.9	ENST00000430530.5	566	4	-18	15	1	-15	multi-exon	FALSE	canonical	2	2	junction_3	5.31245915016974	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCATTCTGTTTATCT	5822775	True	NA	NA	False	NA	NA	NA	5823170	5839137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839069
WTC11_00082882	chr7	+	562	3	FSM	ENSG00000136238.18	ENST00000473564.1	576	3	14	0	14	0	multi-exon	FALSE	canonical	3	3641	junction_2	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTTGACGAAGCGAT	6399736	False	NA	NA	False	NA	NA	NA	6399836	6402365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6400189_6401867_6402028_6402315
WTC11_00082883	chr7	+	516	3	FSM	ENSG00000228010.6	ENST00000430844.5	532	3	16	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCTTTGGAAGCTAAT	6663406	True	NA	NA	False	NA	NA	NA	6663989	6673601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6664044_6665043_6665109_6673204
WTC11_00082885	chr7	+	4333	9	NNC	ENSG00000187953.10	novel	1529	6	NA	NA	0	5	intron_retention	FALSE	canonical	1	3	junction_1	40.04040927613	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTAATTTGTTTGCG	6729016	True	NA	NA	False	AATAAA	-25	NA	6729780	6753867	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_6729931_6730181_6730302_6731896_6731956_6735304_6735390_6737075_6737937_6741684_6741853_6746087_6746189_6747035_6747206_6751248
WTC11_00082888	chr7	+	2121	6	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	214.070642545866	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7176101	True	NA	28	True	AATAAA	-18	NA	7182644	7244350	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7182821_7215119_7215240_7234302_7234540_7237538_7237632_7238254_7238923_7243523
WTC11_00082890	chr7	+	3261	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	128	384	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	78.8771830125797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTACTGTCTGTTAT	7567408	False	NA	NA	False	NA	NA	NA	7567610	7607607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567689_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
WTC11_00082893	chr7	+	618	2	FSM	ENSG00000106443.17	ENST00000497851.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAAAATGCTAGGTTC	11035536	False	NA	NA	False	NA	NA	NA	11035584	11036833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11035787_11036417
WTC11_00082894	chr7	+	1005	4	FSM	ENSG00000106443.17	ENST00000470665.5	1005	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	15.1730755689881	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	11061269	False	NA	NA	False	AATAAA	-22	NA	11061284	11169623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11061842_11061963_11062086_11111349_11111468_11169415
WTC11_00082895	chr7	+	695	2	FSM	ENSG00000106443.17	ENST00000473050.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	NA	False	NA	NA	False	AATAAA	-22	NA	11110980	11169623	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11111468_11169415
WTC11_00082896	chr7	+	297	1	FSM	ENSG00000203523.3	ENST00000421146.1	910	1	-104	717	-104	-717	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTTTTTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	12490990	12491287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12491000_12491300
WTC11_00082897	chr7	+	5895	12	NNC	ENSG00000106546.14	novel	6243	11	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	7.10022697809696	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGTTTTAATGTAAAT	17297673	True	NA	NA	False	AATAAA	-15	NA	17298598	17346147	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_17299330_17309935_17310124_17322500_17322608_17327758_17327849_17329951_17330076_17330755_17330887_17333911_17334115_17334886_17334997_17335644_17335787_17338985_17340229_17342920_17344772_17345172
WTC11_00082898	chr7	+	2428	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	-8	0	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGGTGTTGAAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	17940494	17942922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_17940500_17942900
WTC11_00082899	chr7	+	4422	12	ISM	ENSG00000048052.24	ENST00000686413.1	9880	26	-14	333579	-4	0	5prime_fragment	FALSE	canonical	3	33	junction_6	16.8272702715975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	18494579	True	NA	1	True	AATAAA	-10	NA	18495734	18668837	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082900	chr7	+	4094	11	NIC	ENSG00000048052.24	novel	4239	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	25.920841035738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18494597	True	NA	7	True	AATAAA	-16	NA	18495752	18668843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591637_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
WTC11_00082901	chr7	+	807	5	Fusion	ENSG00000228598.1_ENSG00000267055.1	novel	639	4	NA	NA	-20843	-2	multi-exon	FALSE	canonical	2	18	junction_2	4.96865172858795	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTATGGTAATCTGGAG	20119240	True	NA	3	True	AATAAA	-14	NA	20121072	20153529	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_20121314_20128968_20129003_20147426_20147538_20150434_20150590_20153263
WTC11_00082902	chr7	+	210	2	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATATATGATATATATA	NA	False	NA	NA	False	TATAAA	-40	NA	21859048	21874696	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_21859083_21874520
WTC11_00082903	chr7	+	636	2	Antisense	novelGene_ENSG00000105889.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAAAGCCTGTTTAGTG	22703480	True	NA	9	True	AATAAA	-14	NA	22703674	22709269	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_22703935_22708893
WTC11_00082904	chr7	+	5028	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	-364	-4045	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTGAGTTAAATGAAA	22851059	False	NA	NA	False	ATTAAA	-12	NA	22854398	22861399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854965_22856521_22856557_22856972
WTC11_00082906	chr7	+	1697	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	2	348	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	257.952297441023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTATTTGGATTCCTCC	23093729	True	NA	16	True	AATAAA	-19	NA	23105791	23156516	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
WTC11_00082907	chr7	+	1057	1	FSM	ENSG00000230042.1	ENST00000431883.1	664	1	18	-411	18	411	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAAATATCTCATAAGT	23129166	False	NA	NA	False	TTTAAA	-16	NA	23129195	23130252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23129200_23130300
WTC11_00082908	chr7	+	1237	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	52	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	63.480390673026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACATGTATATATTCATA	23179048	True	NA	NA	False	TTTAAA	-37	NA	23182117	23200819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
WTC11_00082909	chr7	+	227	2	FSM	ENSG00000136235.17	ENST00000470994.1	538	2	0	311	0	-311	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTTGGTTCCTACG	NA	False	NA	NA	False	NA	NA	NA	23270042	23273614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23270176_23273520
WTC11_00082910	chr7	+	1485	1	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTAGTCCATGCTTG	23470770	True	NA	NA	False	AATAAA	-15	NA	23471452	23472937	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_23471500_23472900
WTC11_00082911	chr7	+	207	1	FSM	ENSG00000236654.2	ENST00000428259.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAACACCTCCATTTGTA	23480734	False	NA	NA	False	NA	NA	NA	23480752	23480959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23480800_23481000
WTC11_00082912	chr7	+	2626	2	Antisense	novelGene_ENSG00000287523.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	24389133	True	NA	12	True	AATAAA	-18	NA	24396599	24401945	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_24398816_24401535
WTC11_00082913	chr7	+	5344	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	24389135	False	NA	12	True	AATAAA	-18	NA	24396601	24401945	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24396600_24401900
WTC11_00082914	chr7	+	4052	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTTTTTCTCAATTGT	24403862	False	NA	4	True	AATAAA	-17	NA	24403886	24407938	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24403900_24407900
WTC11_00082915	chr7	+	8465	13	NNC	ENSG00000105926.16	novel	3848	13	NA	NA	-262	91	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	82.1771037995918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGATTATATACTCCTG	24572983	False	NA	NA	False	AAAACA	-23	NA	24573005	24694284	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_24573072_24573489_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
WTC11_00082916	chr7	+	949	3	FSM	ENSG00000122565.19	ENST00000462165.2	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2024	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTCTCAAACTTTTTT	26206148	True	NA	6	True	AATAAA	-16	NA	26206367	26210582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26206511_26208392_26208556_26209939
WTC11_00082917	chr7	+	542	5	FSM	ENSG00000106069.24	ENST00000446446.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.87228132326901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTTACCCATCCCTG	NA	False	NA	NA	False	CATAAA	-31	NA	29400699	29507303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29400829_29495951_29496037_29499866_29500041_29504743_29504822_29507227
WTC11_00082918	chr7	+	4609	4	NIC	ENSG00000180354.16	novel	5761	3	NA	NA	-240	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_3	7.48331477354788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTGTTTGCCTCTT	30134691	False	NA	22	True	ATTAAA	-14	NA	30134745	30162760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30135299_30146176_30146300_30157437_30157596_30158985
WTC11_00082919	chr7	+	2196	2	FSM	ENSG00000281404.2	ENST00000653239.1	4830	2	2634	0	2634	0	multi-exon	FALSE	canonical	3	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATATAACAAATGAGACT	NA	False	NA	NA	False	ATTAAA	-10	NA	30401425	30404042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30403181_30403601
WTC11_00082920	chr7	+	4188	2	FSM	ENSG00000106105.15	ENST00000496643.2	4189	2	5	-4	5	0	multi-exon	FALSE	canonical	3	1489	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30628511	False	NA	19	True	ATTAAA	-22	NA	30628548	30634033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30632438_30633734
WTC11_00082921	chr7	+	3430	2	FSM	ENSG00000237004.4	ENST00000650302.1	711	2	38	-2757	38	2757	multi-exon	FALSE	canonical	2	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGACGGAGGGGCCTG	32728841	False	NA	NA	False	ATTAAA	-2	NA	32728875	32756501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32729010_32753205
WTC11_00082922	chr7	+	656	1	FSM	ENSG00000281332.1	ENST00000628855.1	2646	1	268	1722	268	-1722	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTCTTGGAATCTT	NA	False	NA	NA	False	NA	NA	NA	32760546	32761202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32760500_32761200
WTC11_00082924	chr7	+	556	4	FSM	ENSG00000122507.21	ENST00000432983.5	613	4	57	0	-16	0	multi-exon	FALSE	canonical	1	2	junction_1	25.3902868567227	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCTAGAAAACTTTGTG	33129271	True	NA	NA	False	NA	NA	NA	33129300	33155667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33129553_33146241_33146365_33152700_33152852_33155637
WTC11_00082925	chr7	+	3243	22	FSM	ENSG00000122507.21	ENST00000671890.1	3243	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	136.847201149987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGGGAAGTCAGCTGA	33129152	True	NA	NA	False	NA	NA	NA	33129529	33605405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
WTC11_00082926	chr7	+	3909	21	FSM	ENSG00000122507.21	ENST00000350941.7	3899	21	-10	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	135.316028244994	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	33129152	True	NA	5	True	AATAAA	-19	NA	33129529	33606068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
WTC11_00082929	chr7	+	487	2	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACGTCATGGTAAAAAAA	34174800	True	NA	NA	False	AAGAAA	-2	NA	34175106	34196480	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_34175332_34196218
WTC11_00082933	chr7	+	2789	7	NIC	ENSG00000122547.11	novel	2769	9	NA	NA	-82	0	intron_retention	FALSE	canonical	2	5	junction_4	14.279939308928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGCAGTGAGAGCATG	36152009	True	NA	4	True	AATAAA	-14	NA	36153171	36299725	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36287638_36287778_36296992_36297188_36299006
WTC11_00082936	chr7	+	652	2	FSM	ENSG00000188185.13	ENST00000668152.1	1290	2	0	638	0	-638	multi-exon	FALSE	canonical	3	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCCACTGGCAATA	39733602	False	NA	NA	False	NA	NA	NA	39733659	39767670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39734045_39767403
WTC11_00082937	chr7	+	2252	4	NNC	ENSG00000188185.13	novel	3069	10	NA	NA	9479	1649	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.46337971105226	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCAACGTGTTCTGTTC	NA	False	NA	12	True	AATGAA	-12	NA	39791167	39794741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_39791368_39791593_39791652_39791743_39792608_39793611
WTC11_00082940	chr7	+	3744	9	FSM	ENSG00000065883.17	ENST00000484589.2	5166	9	0	1422	0	-1422	multi-exon	FALSE	canonical	1	1	junction_8	39.9309951666622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTCAGTATTTTGAAA	39987825	True	NA	NA	False	NA	NA	NA	39987835	40071721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39988259_39997493_39997665_39999360_39999501_40001860_40002032_40045835_40046026_40047820_40047878_40062825_40062928_40063022_40063101_40069309
WTC11_00082942	chr7	+	274	1	FSM	ENSG00000237972.1	ENST00000418303.1	1358	1	730	354	730	-354	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTGCAGAGGATCCG	43919403	False	NA	NA	False	NA	NA	NA	43919426	43919700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43919400_43919700
WTC11_00082943	chr7	+	751	6	FSM	ENSG00000078967.13	ENST00000443780.5	743	6	-8	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.2847363150216	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAATACTGATTCTAC	43925730	True	NA	NA	False	NA	NA	NA	43926435	43948989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43926557_43928013_43928112_43938430_43938495_43942825_43942858_43942953_43943032_43948631
WTC11_00082946	chr7	+	2172	8	FSM	ENSG00000106624.11	ENST00000413907.1	2172	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	101.82818662746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGACTGCTCACATTCTGA	44111188	False	NA	5	True	AATAAA	-14	NA	44111204	44114559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44111240_44111506_44111773_44111853_44112051_44112205_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
WTC11_00082948	chr7	+	3788	18	FSM	ENSG00000122515.16	ENST00000413916.5	3773	18	-15	0	-15	0	multi-exon	FALSE	canonical	3	20	junction_3	38.9660485702165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGAGTCCCTCCTTTG	44748171	True	NA	20	True	ATTAAA	-20	NA	44748565	44768694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44748632_44756187_44756300_44756424_44756540_44757042_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
WTC11_00082949	chr7	+	4068	19	NNC	ENSG00000122515.16	novel	5228	19	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_15	31.4621563779506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCCGAGTCCCT	44746773	True	NA	14	True	ATTAAA	-14	NA	44748825	44768688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44765966_44766057_44766163_44766334_44766420_44766664_44767515
WTC11_00082950	chr7	+	1232	7	NNC	ENSG00000272556.3	novel	10247	17	NA	NA	9200	-9972	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	7.35791335154804	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGCATGGATTTTGGT	NA	False	NA	NA	False	NA	NA	NA	45782794	45805291	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_45783147_45788718_45788955_45791787_45791853_45795074_45795199_45797477_45797675_45798538_45798604_45805098
WTC11_00082951	chr7	+	1654	2	ISM	ENSG00000272556.3	ENST00000609439.2	10247	17	38235	6178	33745	-6178	3prime_fragment	FALSE	canonical	3	20	junction_1	0	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGTTCTTAAAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	45807339	45809085	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_45807398_45807489
WTC11_00082952	chr7	+	5052	1	FSM	ENSG00000225507.1	ENST00000411911.1	526	1	-1454	-3072	-1454	3072	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTGTAAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	47955338	47960390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_47955300_47960400
WTC11_00082953	chr7	+	921	7	NIC	ENSG00000183696.14	novel	918	7	NA	NA	188	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	108.096279101344	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48088941	True	NA	9	True	ATTAAA	-15	NA	48089563	48108419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48101823_48101871_48106872_48107083_48107360_48107508_48108217
WTC11_00082954	chr7	+	4486	1	FSM	ENSG00000218586.3	ENST00000407916.2	4486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAGTAATTGCAAACA	NA	False	NA	NA	False	NA	NA	NA	54933698	54938184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_54933700_54938200
WTC11_00082955	chr7	+	2057	4	FSM	ENSG00000178665.16	ENST00000633730.1	2065	4	8	0	8	0	multi-exon	FALSE	canonical	2	3	junction_3	1.63299316185545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	55912645	55940740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55912724_55923161_55923289_55923606_55923700_55938981
WTC11_00082956	chr7	+	476	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_1	327.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	55936988	True	NA	-71	True	NA	NA	NA	55951876	55955172	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_55951949_55953178_55953319_55954908
WTC11_00082957	chr7	+	1398	2	FSM	ENSG00000146731.11	ENST00000466479.1	745	2	-974	321	-33	0	multi-exon	FALSE	canonical	3	3520	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTGAACAGGATGTT	56061612	False	NA	1	True	CATAAA	-11	NA	56061644	56063299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56062756_56063012
WTC11_00082960	chr7	+	905	1	FSM	ENSG00000228653.2	ENST00000456056.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATAGTGGGGGTTAGAA	NA	False	NA	NA	False	NA	NA	NA	64500824	64501729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64500800_64501700
WTC11_00082961	chr7	+	300	1	FSM	ENSG00000224669.1	ENST00000414815.1	475	1	1	174	1	-174	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCAGGAGAAGTAACTT	64580408	False	NA	NA	False	NA	NA	NA	64582733	64583033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64582700_64583000
WTC11_00082963	chr7	+	2530	3	FSM	ENSG00000197008.10	ENST00000440155.6	1066	3	-26	-1438	11	0	multi-exon	FALSE	canonical	3	17	junction_2	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	64790071	True	NA	19	True	AATAAA	-33	NA	64794398	64833680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64831450
WTC11_00082964	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790162	True	NA	15	True	AATAAA	-29	NA	64794489	64833676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64831450
WTC11_00082966	chr7	+	3702	9	FSM	ENSG00000234585.6	ENST00000419314.5	3702	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.8239670803736	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65037979	True	NA	NA	False	AATAAA	-18	NA	65038353	65074713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65070485_65070908_65071043_65073440_65073515_65073777
WTC11_00082967	chr7	+	499	3	ISM	ENSG00000164669.13	ENST00000438455.3	1935	15	38051	27255	38051	-27255	internal_fragment	FALSE	canonical	3	109	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGCAGCTTTGGCATC	NA	False	NA	NA	False	NA	NA	NA	65179291	65185539	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_65179498_65182973_65183117_65185389
WTC11_00082968	chr7	+	2245	18	NNC	ENSG00000126522.17	novel	2140	17	NA	NA	-33	18267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	56.2265560526014	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAAATGTAGCACATTT	66073594	True	NA	NA	False	NA	NA	NA	66075766	66112964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767_66093587_66112921
WTC11_00082969	chr7	+	2023	8	NNC	ENSG00000154710.18	novel	3733	9	NA	NA	-846	-2648	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	48.0832611206852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGGAGAAGGACTAGG	NA	False	NA	NA	False	NA	NA	NA	66739886	66805416	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66740793_66771882_66772079_66775226_66775394_66783671_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139
WTC11_00082971	chr7	+	5669	1	FSM	ENSG00000273142.1	ENST00000610177.1	3441	1	-1456	-772	-1456	772	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTAGTACAAGCTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	66901400	66907069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66901400_66907100
WTC11_00082972	chr7	+	3890	5	NIC	ENSG00000106609.16	novel	4229	7	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	180.434718111565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	66916025	True	NA	13	True	AATAAA	-14	NA	66921235	66958551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66955501
WTC11_00082973	chr7	+	3113	15	NIC	ENSG00000198874.14	novel	3330	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	35.1338548283851	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	66995002	True	NA	8	True	AATAAA	-18	NA	66996854	67239514	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
WTC11_00082974	chr7	+	6017	15	NIC	ENSG00000158321.18	novel	4583	14	NA	NA	-65	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	42.1077335472927	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	70689551	True	NA	12	True	ATTAAA	-14	NA	70693992	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082975	chr7	+	5792	14	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	133	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	35.9628342012554	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	70694161	False	NA	12	True	ATTAAA	-14	NA	70694190	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766356_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082976	chr7	+	4454	7	ISM	ENSG00000158321.18	ENST00000647140.1	3006	13	11371	-1513	-132	3	3prime_fragment	FALSE	canonical	3	96	junction_1	17.5467629176691	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCAGCTGCTTGTTTGT	70774644	False	NA	12	True	ATTAAA	-14	NA	70774654	70792870	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
WTC11_00082977	chr7	+	1629	5	NNC	ENSG00000225648.6	novel	1621	5	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.0895549992802	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72829344	True	NA	NA	False	AATAAA	-22	NA	72829379	72837376	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_72829784_72830750_72830814_72831601_72831799_72833763_72833929_72836576
WTC11_00082979	chr7	+	1861	9	Fusion	ENSG00000174384.9_ENSG00000285702.1	novel	710	6	NA	NA	25831	736	multi-exon	FALSE	canonical	2	9	junction_3	13.9888348335378	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTCCCAGGCTCCAGCG	NA	False	NA	NA	False	NA	NA	NA	73065526	73106125	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_73065671_73067561_73067649_73067814_73067928_73069347_73069532_73093656_73093797_73095681_73095769_73097383_73097568_73100617_73100707_73105292
WTC11_00082980	chr7	+	3696	25	NNC	ENSG00000233369.7	novel	3609	24	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_9	635.066333750962	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	73152610	True	NA	NA	False	AATAAA	-14	NA	73154962	73207283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73190754_73190867_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
WTC11_00082981	chr7	+	3203	23	ISM	ENSG00000233369.7	ENST00000544802.5	3609	24	20477	0	0	0	3prime_fragment	FALSE	canonical	3	646	junction_20	480.215731479437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	73175414	73207283	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
WTC11_00082982	chr7	+	4106	2	FSM	ENSG00000189143.10	ENST00000431918.1	4108	2	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAATTTTATTGTCTCT	73828093	True	NA	17	True	AATAAA	-17	NA	73828175	73832683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73828198_73828599
WTC11_00082983	chr7	+	528	8	FSM	ENSG00000049540.19	ENST00000431562.5	542	8	14	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	4.80221037542046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGCCCAAGGCTCCAG	74028050	True	NA	NA	False	NA	NA	NA	74028114	74045273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74028270_74035363_74035415_74037706_74037740_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221
WTC11_00082985	chr7	+	2214	16	ISM	ENSG00000049540.19	ENST00000380553.8	2703	25	23592	11	-527	-11	3prime_fragment	FALSE	canonical	2	7	junction_7	3.34398298772919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCTGGATATTTGGG	74051744	False	NA	-2	True	AATAAA	-10	NA	74051766	74069666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
WTC11_00082987	chr7	+	509	4	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3367	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	74889429	True	NA	NA	False	NA	NA	NA	74890748	74897835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651
WTC11_00082988	chr7	+	514	4	FSM	ENSG00000123965.13	ENST00000398065.3	516	4	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	74892798	False	NA	NA	False	NA	NA	NA	74894117	74897835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74894258_74896145_74896233_74896408_74896512_74897651
WTC11_00082989	chr7	+	1954	10	Fusion	ENSG00000178809.12_ENSG00000205583.14	novel	1192	8	NA	NA	0	524	intron_retention	FALSE	canonical	3	9	junction_9	23.3380947522857	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGCGTGATGGGACACA	NA	False	NA	NA	False	NA	NA	NA	75359193	75395907	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75365951_75366060_75366323_75366439_75385082_75385157_75394972
WTC11_00082990	chr7	+	1617	8	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	29	junction_2	155.036796159058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGATAGATCACAGTTT	75409562	True	NA	13	True	AATAAA	-14	NA	75410349	75416783	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415981_75416102_75416192_75416274
WTC11_00082991	chr7	+	1353	6	FSM	ENSG00000223705.10	ENST00000691132.1	1344	6	-12	3	0	-1	multi-exon	FALSE	canonical	3	35	junction_4	143.87077535066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGATAGATCACAGTTTT	75409562	True	NA	14	True	AATAAA	-15	NA	75410349	75416784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415981_75416102_75416192_75416274
WTC11_00082992	chr7	+	2584	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_8	131.302549004199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409607	True	NA	16	True	AATAAA	-17	NA	75410394	75416786	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274_75416420_75416485
WTC11_00082993	chr7	+	522	1	FSM	ENSG00000235090.1	ENST00000455249.1	689	1	195	-28	195	28	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATCAATGAACTGGAAG	75911789	False	NA	NA	False	AGTAAA	-2	NA	75922949	75923471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75922900_75923500
WTC11_00082994	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_3	20.2703943940144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75985543	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
WTC11_00082995	chr7	+	1248	10	NNC	ENSG00000146701.12	novel	2170	9	NA	NA	0	1611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	868.687316772259	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATTTCTGGTTCCATCTC	76024892	True	NA	NA	False	AAAAAG	-1	NA	76048135	76069119	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278_76066590_76069092
WTC11_00082996	chr7	+	1776	1	NIC	ENSG00000177679.16	novel	3617	15	NA	NA	2895	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGTAGGTGGTGAGACC	76284586	False	NA	19	True	AATAAA	-14	NA	76285508	76287284	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76285500_76287300
WTC11_00082997	chr7	+	1437	5	FSM	ENSG00000091073.20	ENST00000423646.5	859	5	-46	-532	-5	532	multi-exon	FALSE	canonical	3	13	junction_2	94.4325155865288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAGCCGGGAAGACTC	NA	False	NA	NA	False	NA	NA	NA	76461670	76483191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76463544_76463710_76477113_76477179_76480420_76480778_76482507
WTC11_00083001	chr7	+	347	3	NNC	ENSG00000265479.7	novel	4646	15	NA	NA	-51	-10135	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	1.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCTGAATCTGAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	76959783	76968523	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76959950_76961765_76961822_76968398
WTC11_00083002	chr7	+	1694	13	Fusion	ENSG00000233448.2_ENSG00000265479.7	novel	4646	15	NA	NA	52	3172	multi-exon	FALSE	canonical	1	2	junction_9	58.6701585135067	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76981153	77046948	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_76981261_76990268_76990370_77000308_77000389_77002162_77002322_77004217_77004308_77005549_77005776_77011884_77012020_77013911_77013999_77015671_77015856_77039955_77040090_77041976_77042064_77043594_77043779_77046828
WTC11_00083003	chr7	+	3194	19	NNC	ENSG00000127947.16	novel	3384	18	NA	NA	0	46398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	71.8626948672275	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGGTTATTTCCTTGA	77537484	True	NA	NA	False	AAAAAG	-2	NA	77537516	77686467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_77537646_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218_77640070_77686435
WTC11_00083004	chr7	+	337	2	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	196	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATTTGAGGGTTTTTT	83415830	True	NA	6	True	ATTAAA	-16	NA	83416088	83432258	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_83416157_83431989
WTC11_00083005	chr7	+	4248	6	FSM	ENSG00000198822.11	ENST00000361669.7	4268	6	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGATAATGGTTTGTTC	86643915	False	NA	NA	False	AATAAA	-21	NA	86643928	86864879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86838838_86839906_86850369_86850545_86864281
WTC11_00083006	chr7	+	3794	19	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	70.607679783749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148799	True	NA	13	True	AATAAA	-17	NA	87152454	87196325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87152556_87163238_87163333_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
WTC11_00083008	chr7	+	4108	16	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	-41	0	intron_retention	FALSE	canonical	3	54	junction_15	50.9531375110721	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87162811	False	NA	13	True	AATAAA	-17	NA	87162840	87196325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87195030
WTC11_00083010	chr7	+	934	1	FSM	ENSG00000231956.1	ENST00000450624.1	950	1	-370	386	-370	-386	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCATCCAGCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	87521090	87522024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87521100_87522000
WTC11_00083011	chr7	+	579	3	FSM	ENSG00000157214.14	ENST00000426158.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGTTGCTATACACAG	90211545	True	NA	NA	False	AATATA	-1	NA	90211872	90225346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90212046_90216494_90216604_90225049
WTC11_00083012	chr7	+	785	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	-10	0	-10	0	multi-exon	TRUE	canonical	1	1	junction_3	41.5363131021814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCCAACATATCATCC	90344499	True	NA	NA	False	AAAACA	-20	NA	90346684	90384937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
WTC11_00083013	chr7	+	1187	3	NNC	ENSG00000105793.16	novel	545	5	NA	NA	-2	1732	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	49.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTAATCTATAGATTTG	90344542	True	NA	NA	False	AGTAAA	-21	NA	90346727	90354964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90346775_90352815_90353010_90354018
WTC11_00083014	chr7	+	715	7	FSM	ENSG00000105793.16	ENST00000474503.1	715	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	44.2292010127045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTCTGATACAATGTC	90352342	False	NA	-92	True	AAGAAA	-16	NA	90354527	90385076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90354550_90355085_90355231_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
WTC11_00083015	chr7	+	250	3	FSM	ENSG00000157224.16	ENST00000498326.5	342	3	0	92	0	-92	multi-exon	FALSE	canonical	1	2	junction_2	164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGTTTCTCACTCCA	90397802	True	NA	NA	False	NA	NA	NA	90403535	90409092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405609_90408946
WTC11_00083016	chr7	+	13921	49	FSM	ENSG00000127914.19	ENST00000681412.1	13915	49	-6	0	-6	0	multi-exon	TRUE	canonical	2	6	junction_18	20.7929608815633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATAAAAATGACTTCAC	91938059	True	NA	-10	True	NA	NA	NA	91940871	92110640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847_92003236_92012428_92012643_92014248_92014329_92016128_92016268_92017016_92017103_92022237_92022353_92022813_92023010_92029894_92029992_92031511_92031605_92038418_92038773_92040673_92040899_92042045_92042187_92042667_92042772_92045007_92045214_92052725_92052959_92061259_92061423_92062273_92062487_92065230_92065464_92066426_92066547_92070029_92070207_92070904_92071010_92076854_92077008_92077695_92077876_92079078_92080153_92082521_92082663_92083169_92083656_92084639_92084704_92084818_92084941_92085494_92085687_92086227_92086417_92089384_92089530_92093096_92093317_92095022_92095174_92096688_92097358_92097585_92097795_92098108_92098215_92099686_92099870_92100855_92101057_92102593_92102827_92105677_92105764_92107292_92107423_92108493
WTC11_00083020	chr7	+	1739	6	NNC	ENSG00000127993.16	novel	4667	5	NA	NA	5	-476	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_5	64.173514786086	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTGAATGAACCA	92527485	True	NA	36	True	AATAAA	-33	NA	92528811	92537529	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536433_92536475_92536850
WTC11_00083022	chr7	+	413	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	116	64	1	-51	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGCTGCCACACCG	92836350	True	NA	-56	True	ATTAAA	-3	NA	92836482	92917123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92836564_92854908_92854954_92916836
WTC11_00083023	chr7	+	3448	17	NIC	ENSG00000127995.17	novel	3931	18	NA	NA	60	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_8	42.4072056819357	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	94509257	True	NA	39	True	ATTAAA	-24	NA	94509868	94557019	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
WTC11_00083024	chr7	+	7783	10	NIC	ENSG00000158528.12	novel	3983	18	NA	NA	341706	83	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	3.28107179116298	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAATCAAGAGCAAAGTG	NA	False	NA	111	True	AAAACA	-45	NA	95251788	95296498	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_95251859_95251958_95252131_95268549_95268708_95269206_95269508_95273898_95273987_95274084_95274169_95284017_95284217_95286205_95286326_95288535_95288719_95290090
WTC11_00083025	chr7	+	774	7	FSM	ENSG00000158560.14	ENST00000519371.1	774	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.1091263510296	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTTTTGCCAT	95837112	True	NA	NA	False	NA	NA	NA	95837617	96028321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_95837650_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174
WTC11_00083026	chr7	+	774	2	FSM	ENSG00000196636.8	ENST00000479853.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGTCTCTTCTCCCT	NA	False	NA	NA	False	AATACA	-15	NA	97142680	97181647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_97142819_97181011
WTC11_00083027	chr7	+	335	1	FSM	ENSG00000272950.1	ENST00000610062.1	578	1	65	178	65	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGATACAAACTCAGT	NA	False	NA	NA	False	NA	NA	NA	98322917	98323252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_98322900_98323300
WTC11_00083028	chr7	+	12593	71	NIC	ENSG00000196367.14	novel	12677	72	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	42.9343019707353	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCCCTTGTTTATGTT	98872351	True	NA	84	True	AATAAA	-18	NA	98878573	99013243	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983493_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993537_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
WTC11_00083029	chr7	+	2435	17	FSM	ENSG00000284292.1	ENST00000638617.1	2430	17	-5	0	-5	0	multi-exon	TRUE	canonical	1	1	junction_8	289.607250211385	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAAGGAATACGTGCCT	99315624	True	NA	NA	False	AAAAAG	-31	NA	99325873	99394653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394032_99394120_99394450
WTC11_00083030	chr7	+	498	2	FSM	ENSG00000241685.10	ENST00000477240.1	541	2	43	0	43	0	multi-exon	FALSE	canonical	3	972	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	99363496	False	NA	8	True	AATAAA	-15	NA	99363507	99366262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99363634_99365890
WTC11_00083038	chr7	+	433	3	FSM	ENSG00000197037.11	ENST00000473646.5	584	3	18	133	5	-133	multi-exon	FALSE	canonical	2	2	junction_1	31	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCCAAATGATGGAGCA	99616532	True	NA	NA	False	NA	NA	NA	99616970	99624351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99617017_99622548_99622641_99624056
WTC11_00083041	chr7	+	10127	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_5	19.7382876663605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTGTGCTGGTTTGTT	100012308	True	NA	33	True	AATAAA	-19	NA	100015595	100041688	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100031101_100033304
WTC11_00083042	chr7	+	2134	5	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	19	-3	intron_retention	FALSE	canonical	3	19	junction_2	53.5607132140714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCAGGACTATT	100048073	True	NA	2	True	AATAAA	-13	NA	100049812	100065035	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100049842_100051477_100051647_100056910_100057406_100057697_100057891_100063787
WTC11_00083045	chr7	+	3864	16	NIC	ENSG00000272752.6	novel	2661	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_10	43.3827410639556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	100331432	True	NA	-33	True	ATTAAA	-25	NA	100336113	100367663	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
WTC11_00083046	chr7	+	2661	17	FSM	ENSG00000272752.6	ENST00000444874.5	2661	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	55.1568431271225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	100331561	False	NA	-33	True	ATTAAA	-25	NA	100336242	100367663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349730_100349888_100351251_100351411_100352261_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358898_100359080_100359336_100359538_100367348
WTC11_00083047	chr7	+	2334	9	FSM	ENSG00000121716.21	ENST00000448382.5	2314	9	-20	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	72.2710825641902	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTTTTCTCCTCGTCC	100352257	False	NA	37	True	AATACA	-20	NA	100352267	100367733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100352479_100352563_100353124_100353209_100353271_100355142_100355241_100356393_100356884_100358219_100358367_100358898_100359080_100359336_100359538_100367348
WTC11_00083049	chr7	+	1100	1	FSM	ENSG00000184414.2	ENST00000223076.2	1006	1	-395	301	-395	-301	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	100569648	True	NA	NA	False	NA	NA	NA	100569735	100570835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100569700_100570800
WTC11_00083050	chr7	+	1365	9	NNC	ENSG00000106333.13	novel	765	5	NA	NA	88	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	81.1948851529454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATGGGTCAGATCTCCA	100603120	True	NA	3	True	AATAAA	-13	NA	100603250	100608170	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
WTC11_00083052	chr7	+	1006	6	NNC	ENSG00000106330.12	novel	1154	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	141.902219855787	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611307	True	NA	12	True	AATAAA	-21	NA	100612560	100615377	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100612603_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
WTC11_00083053	chr7	+	2576	16	NIC	ENSG00000087087.20	novel	2990	20	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	289.300581863685	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTCCAGGTTCCCCTT	100858160	True	NA	NA	False	NA	NA	NA	100875071	100887200	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100882764_100883091_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046
WTC11_00083056	chr7	+	1604	12	NIC	ENSG00000087087.20	novel	2990	20	NA	NA	51	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	356.881719878549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGGCTCCTGACTCTC	100884765	False	NA	11	True	AATAAA	-8	NA	100884804	100888656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888473
WTC11_00083057	chr7	+	759	2	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	100922294	True	NA	5	True	AATAAA	-21	NA	100922581	100943427	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_100922817_100942903
WTC11_00083058	chr7	+	474	2	FSM	ENSG00000169871.13	ENST00000467847.1	581	2	107	0	107	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGAGGGTGTGGCCTCC	101085351	False	NA	NA	False	NA	NA	NA	101086891	101087508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101087169_101087311
WTC11_00083059	chr7	+	726	1	FSM	ENSG00000278683.1	ENST00000611491.1	394	1	-166	-166	-166	166	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGAATCCTCAGTGAT	NA	False	NA	NA	False	AAAAAG	-27	NA	101273155	101273881	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101273200_101273900
WTC11_00083061	chr7	+	2882	22	FSM	ENSG00000257923.12	ENST00000547394.6	2878	22	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.7232630074162	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	101812594	True	NA	12	True	AATAAA	-15	NA	101816004	102283957	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101816094_101916114_101916226_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
WTC11_00083062	chr7	+	429	5	FSM	ENSG00000257923.12	ENST00000465461.7	543	5	0	114	0	-114	multi-exon	FALSE	canonical	1	2	junction_4	87.7168740893108	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGGTGACAAGAGCAA	102097458	True	NA	NA	False	NA	NA	NA	102097477	102125664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102125527
WTC11_00083063	chr7	+	3307	8	ISM	ENSG00000160999.11	ENST00000444095.3	2236	9	12356	0	12356	0	3prime_fragment	FALSE	canonical	3	130	junction_4	16.7148962037471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	NA	False	NA	11	True	ATTAAA	-21	NA	102299223	102321711	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
WTC11_00083064	chr7	+	1747	10	NNC	ENSG00000128563.13	novel	3430	10	NA	NA	-87	-1	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	70.3688693797035	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTTTTGTTGGGACAT	102362026	True	NA	13	True	AGTAAA	-13	NA	102363784	102425445	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102363911_102366017_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
WTC11_00083065	chr7	+	1640	9	NNC	ENSG00000128563.13	novel	1625	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.0237421796638	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTGGGACATGTGG	102362117	True	NA	17	True	AGTAAA	-17	NA	102363875	102425449	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102364412_102365973_102366077_102375822_102375946_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
WTC11_00083066	chr7	+	1037	1	FSM	ENSG00000213385.3	ENST00000434317.1	794	1	-224	-19	-224	19	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTACATAAAAATAATTAA	102754734	False	NA	NA	False	ACTAAA	-29	NA	102754921	102755958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102754900_102756000
WTC11_00083068	chr7	+	1179	9	ISM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	1940	0	0	5prime_fragment	TRUE	canonical	3	651	junction_1	36.1135362433534	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGAAAAATAGCTTTAAG	103289837	True	NA	NA	False	AAAAAG	-5	NA	103297434	103310475	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314
WTC11_00083069	chr7	+	2906	13	NNC	ENSG00000161057.13	novel	3988	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	272.127867718264	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAAGTCTTTCCACTTT	103344257	False	NA	9	True	AATAAA	-20	NA	103344316	103369395	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_103344392_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
WTC11_00083072	chr7	+	9282	23	NNC	ENSG00000005483.22	novel	597	5	NA	NA	1997	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	26.3537599055054	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTCCTTCTAAGCATT	NA	False	NA	NA	False	AATAAA	-39	NA	105064194	105115019	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105066630_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105106004_105106521_105106773_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
WTC11_00083073	chr7	+	334	1	FSM	ENSG00000213361.2	ENST00000393647.2	319	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTCCCTGCCCTCTC	NA	False	NA	NA	False	AAGAAA	-7	NA	105244636	105244970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105244600_105245000
WTC11_00083075	chr7	+	834	2	FSM	ENSG00000128536.16	ENST00000487084.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAGTAGCTGGGATTAT	105875311	True	NA	NA	False	NA	NA	NA	105876795	105910598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105877258_105910226
WTC11_00083076	chr7	+	1725	5	NNC	ENSG00000128536.16	novel	2199	15	NA	NA	0	29132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.5573683548744	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGGGAAACAGAAAGCCAT	105875311	True	NA	56	True	NA	NA	NA	105876795	105953315	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105877258_105878206_105878355_105911016_105911242_105912482_105912639_105952581
WTC11_00083077	chr7	+	3058	6	NNC	ENSG00000128536.16	novel	993	4	NA	NA	4	-898	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.3066352200821	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGGATGAACTCTT	105875315	True	NA	NA	False	AATAAA	-14	NA	105876799	105923285	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105877258_105878206_105878355_105911016_105911242_105912482_105912639_105919534_105919608_105921287
WTC11_00083078	chr7	+	3339	10	NIC	ENSG00000005249.13	novel	3689	11	NA	NA	-95	-306	combination_of_known_splicesites	TRUE	canonical	2	19	junction_9	80.3351006413867	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATTATTGTTTTTCAT	107041441	True	NA	17	True	AATAAA	-22	NA	107044609	107161505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107159448
WTC11_00083081	chr7	+	1038	1	FSM	ENSG00000250474.2	ENST00000515260.2	998	1	55	-95	55	95	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTTGATTCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	107628607	107629645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107628600_107629600
WTC11_00083082	chr7	+	4689	6	FSM	ENSG00000105879.12	ENST00000420796.1	1506	6	-229	-2954	53	107	multi-exon	FALSE	canonical	1	3	junction_1	136.717226420082	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAAAACCATCAAGTTGA	107740729	False	NA	NA	False	AGTAAA	-20	NA	107744207	107761774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107744838_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
WTC11_00083083	chr7	+	540	6	FSM	ENSG00000091140.15	ENST00000453354.5	537	6	-3	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	516.265977960973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTACTGCAGTAAAAG	107877031	True	NA	NA	False	NA	NA	NA	107891182	107904997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904862
WTC11_00083085	chr7	+	826	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	19	0	3	0	multi-exon	FALSE	canonical	3	16	junction_1	75.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	116525092	True	NA	87	True	TTTAAA	-21	NA	116526295	116559513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116526389_116526524_116526690_116558945
WTC11_00083095	chr7	+	3658	5	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-7384	105228	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	45.4223238066922	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTTTGGAGACTGAT	125910410	True	NA	17	True	AATAAA	-12	NA	125910486	126039060	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125910560_125912249_125912538_125917885_125918119_125924211_125924388_126036172
WTC11_00083096	chr7	+	4787	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-11	149360	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_1	17.2497987105808	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTCATTTTCTGAGAA	125917015	True	NA	NA	False	NA	NA	NA	125917859	126083192	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125924211_125924388_126078378_126078408_126078869
WTC11_00083097	chr7	+	1967	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	4	-3637	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_1	32.9342779891509	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCCTTTGTATAGTTC	125917030	True	NA	16	True	AATAAA	-21	NA	125917874	125930195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125920056_125920154_125924211_125924388_125928745
WTC11_00083098	chr7	+	627	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	4	74234	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_2	32.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGTATATTTCATT	125917030	True	NA	17	True	AATATA	-26	NA	125917874	126008066	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125924211_125924388_126007859
WTC11_00083099	chr7	+	5341	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6123	105229	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	149.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTTTGGAGACTGATT	125917507	True	NA	18	True	AATAAA	-13	NA	125923993	126039061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125924046_125924211_125924388_126033948
WTC11_00083104	chr7	+	861	5	NIC	ENSG00000165055.16	novel	411	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_4	178.433460987563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	128471297	True	NA	1	True	AATAAA	-20	NA	128476756	128488597	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128488322
WTC11_00083110	chr7	+	3277	16	NIC	ENSG00000128596.17	novel	4246	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	19.646204043869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTGGATTTTTATT	128789425	True	NA	NA	False	ATTAAA	-17	NA	128791461	128822130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128809449_128809645_128810138_128810367_128811799_128812313_128812707_128812930_128821798
WTC11_00083112	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	128844385	True	NA	36	True	ATTAAA	-20	NA	128862903	128865844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128863063_128865119_128865204_128865376
WTC11_00083118	chr7	+	1748	6	ISM	ENSG00000128585.18	ENST00000458153.5	2448	18	-32	87522	9	1056	5prime_fragment	FALSE	canonical	3	14	junction_5	147.380324331303	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGTATATTTTGGAGTA	131322062	True	NA	NA	False	AATAAA	-18	NA	131327864	131400440	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237
WTC11_00083123	chr7	+	3020	10	NNC	ENSG00000122786.20	novel	2124	12	NA	NA	0	43501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	300.048061993696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTGATACCTATTTC	134941122	True	NA	NA	False	NA	NA	NA	134941181	135014230	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553_134970641_135014197
WTC11_00083133	chr7	+	2482	16	FSM	ENSG00000006530.18	ENST00000650547.1	2472	16	-10	0	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	73.7637670766165	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAATCTATTATGCCCG	141549422	False	NA	73	True	NA	NA	NA	141551553	141654058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141551619_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
WTC11_00083148	chr7	+	600	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_3	182.558723428928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195509	False	NA	NA	False	AATAAA	-15	NA	144195519	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144200170_144200278_144207692_144207805_144239274_144239389_144243746
WTC11_00083149	chr7	+	517	4	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	172	junction_1	58.7329171381395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144195851	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144207692_144207805_144239274_144239389_144243746
WTC11_00083150	chr7	+	607	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	278	junction_1	189.192197249252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144195868	144243831	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144200170_144200278_144207692_144207805_144239274_144239389_144243746
WTC11_00083155	chr7	+	4537	7	NNC	ENSG00000204946.10	novel	4424	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	8.552127740445	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCGTGCGCTTGATCT	149261533	True	NA	NA	False	AATAAA	-15	NA	149262195	149284988	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278135_149278249_149278398_149278528_149281504
WTC11_00083160	chr7	+	1377	8	NIC	ENSG00000244560.7	novel	2804	10	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	11.7924223334223	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTCTCAATTTTAATG	149284146	True	NA	8	True	AATAAA	-18	NA	149285293	149297302	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_149285497_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149294379_149294413_149294539_149294902_149297050
WTC11_00083164	chr7	+	4661	16	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	-875	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	10.1709826904232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149717243	False	NA	13	True	ATTAAA	-16	NA	149718546	149734571	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_149719673_149720052_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
WTC11_00083176	chr7	+	2913	17	NNC	ENSG00000133612.19	novel	3494	18	NA	NA	13	-4	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	63.1198017661653	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGGCCTTGTTTCCCCC	151085564	True	NA	9	True	AATAAA	-11	NA	151085879	151144428	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151086061_151086921_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
WTC11_00083177	chr7	+	2745	11	NNC	ENSG00000133612.19	novel	3494	18	NA	NA	-48	21	intron_retention	FALSE	canonical	3	7	junction_10	67.0358859119502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTGAATGTGGCTTAA	151084813	True	NA	7	True	ATTAAA	-13	NA	151086426	151131307	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151130203
WTC11_00083180	chr7	+	2042	16	NIC	ENSG00000013374.17	novel	3109	15	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	155.072828768364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCAGCTCTTTCTGTTC	151336390	True	NA	9	True	TATAAA	-21	NA	151341813	151377283	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352092_151352194_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
WTC11_00083181	chr7	+	1673	9	NNC	ENSG00000013374.17	novel	1703	9	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	3	43	junction_6	142.217263368411	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTCCAAAGGTGACCA	151336395	True	NA	10	True	AATAAA	-16	NA	151341818	151361237	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356130_151356223_151360140_151360915_151361058
WTC11_00083196	chr7	+	480	3	FSM	ENSG00000146909.8	ENST00000472491.1	593	3	0	113	0	-3	multi-exon	FALSE	canonical	3	53	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGGGAGGACTGGGCT	156962156	True	NA	NA	False	NA	NA	NA	156962167	156964122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_156962262_156963007_156963176_156963904
WTC11_00083198	chr7	+	6548	26	NNC	ENSG00000126870.16	novel	3789	25	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.2203056757225	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	158854838	True	NA	6	True	ATTAAA	-20	NA	158856605	158946189	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158900145_158900265_158901738_158901817_158902375_158905284_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
WTC11_00083199	chr7	+	457	3	FSM	ENSG00000126870.16	ENST00000397143.3	457	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGGCCAGGAGACACGC	158869381	False	NA	87	True	NA	NA	NA	158869445	158871499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_158869491_158869854_158869909_158871141
WTC11_00083200	chr7	+	2770	3	NIC	ENSG00000126870.16	novel	2769	20	NA	NA	-1580	0	intron_retention	FALSE	canonical	3	147	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	NA	False	NA	6	True	ATTAAA	-20	NA	158932612	158946189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_158934550_158941924_158942149_158945580
WTC11_00083202	chr7	-	2225	3	NIC	ENSG00000242474.3	novel	2091	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	-148701	False	NA	-7	True	ATTAAA	-16	NA	149466	145935	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_147840_148531_148715_149328
WTC11_00083203	chr7	-	2154	3	FSM	ENSG00000234471.1_ENSG00000197461.13	ENST00000434541.1	420	3	-1774	40	-1774	-40	multi-exon	FALSE	canonical	1	1	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCCAAGCAATGAAGACAA	-497858	False	NA	NA	False	NA	NA	NA	497892	484146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_484200_494843_494957_495904
WTC11_00083205	chr7	-	604	4	FSM	ENSG00000197461.13	ENST00000405692.2	663	4	59	0	-29	0	multi-exon	FALSE	canonical	2	2	junction_3	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCGGTGAGTCCAGGAGG	-520144	False	NA	NA	False	NA	NA	NA	520237	512356	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_512456_517393_517491_518938_519069_519959
WTC11_00083206	chr7	-	1343	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	0	812	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	155.06685137405	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACGGTGGCAGCT	-723387	True	NA	-28	True	ATTAAA	-10	NA	727650	578443	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
WTC11_00083207	chr7	-	2302	11	FSM	ENSG00000105963.15	ENST00000649206.1	2360	11	61	-3	44	0	multi-exon	FALSE	canonical	0	0	junction_5	9.99049548320803	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTCCGAGGATGGA	-954347	False	NA	-1	True	AATAAA	-23	NA	954636	897899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900614_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_954395
WTC11_00083208	chr7	-	508	2	FSM	ENSG00000164877.19	ENST00000487156.1	874	2	366	0	-339	0	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGCCGGAGCCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	1440361	1438924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1438996_1439924
WTC11_00083209	chr7	-	826	4	FSM	ENSG00000164880.16	ENST00000493531.1	828	4	2	0	2	0	multi-exon	FALSE	canonical	2	2	junction_3	134.437924543469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCGTGCTGCTGCAGGG	-1489286	False	NA	NA	False	NA	NA	NA	1501277	1499527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1499633_1499883_1500022_1500169_1500367_1500891
WTC11_00083210	chr7	-	1546	3	NNC	ENSG00000157778.9	novel	1428	2	NA	NA	-83	57691	intron_retention	FALSE	non_canonical	0	0	junction_1	249	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGACATCCAG	-1570112	False	NA	NA	False	NA	NA	NA	1570128	1509640	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_1509663_1567331_1567851_1569123
WTC11_00083211	chr7	-	2322	17	NIC	ENSG00000002822.16	novel	2762	19	NA	NA	99	5	combination_of_known_junctions	TRUE	canonical	3	28	junction_15	45.8413960711277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCCTGTGTATCTGTG	-2230548	False	3863	0	True	AATAAA	-23	NA	2230562	1815787	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548
WTC11_00083214	chr7	-	373	1	FSM	ENSG00000213935.3	ENST00000454916.1	373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCCATTTATCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	4865804	4865431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_4865400_4865800
WTC11_00083215	chr7	-	1850	2	Antisense	novelGene_ENSG00000272968.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCGAGTTTGATT	NA	False	NA	NA	False	AGTAAA	-7	NA	5007181	5004426	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_5006210_5007114
WTC11_00083216	chr7	-	5637	18	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	8952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8596826010368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGAGGGGTGTAAAAA	-5777626	True	NA	NA	False	NA	NA	NA	5781663	5611094	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5611128_5620048_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
WTC11_00083217	chr7	-	5808	18	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	8952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3327955083643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGAGGGGTGTAAAAA	-5777626	True	NA	NA	False	NA	NA	NA	5781663	5611094	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5611128_5620048_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
WTC11_00083219	chr7	-	2316	7	FSM	ENSG00000164535.15	ENST00000462934.5	2589	7	274	-1	274	1	multi-exon	FALSE	canonical	3	110	junction_5	13.3010024684858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTACAGCTGCGTGC	-6422519	False	NA	-10	True	AATAAA	-20	NA	6422529	6409124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726
WTC11_00083222	chr7	-	1837	16	NNC	ENSG00000146574.16	novel	1814	15	NA	NA	0	48578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.785583415904	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCCACAAAAACAAAAATT	-6826260	False	NA	NA	False	NA	NA	NA	6826272	6745555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_6745583_6798937_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
WTC11_00083223	chr7	-	1015	1	FSM	ENSG00000205897.5	ENST00000496207.1	1015	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTAGAAAGGGCAACCA	NA	False	NA	NA	False	NA	NA	NA	6867672	6866657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6866700_6867700
WTC11_00083224	chr7	-	641	2	FSM	ENSG00000106399.11	ENST00000483031.1	641	2	0	0	0	0	multi-exon	FALSE	canonical	3	2199	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGATTGTAAATGAGCTA	-7638346	False	NA	-81	True	NA	NA	NA	7638406	7636984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7637083_7637863
WTC11_00083228	chr7	-	5689	29	NNC	ENSG00000146530.15	novel	5936	30	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	12.7952378737129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTATGTCTGCATCATTA	-12402675	True	NA	-2	True	AATAAA	-26	NA	12403924	12330881	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12354349_12354488_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372489_12373248_12374688_12374763_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
WTC11_00083230	chr7	-	6215	13	NNC	ENSG00000006468.14	novel	6459	14	NA	NA	-63	25078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.497663500381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGAGCAACCTTA	-13989156	False	5741	NA	False	NA	NA	NA	13989166	13866150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_13866181_13891228_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007
WTC11_00083231	chr7	-	305	4	FSM	ENSG00000136267.14	ENST00000464065.1	582	4	277	0	277	0	multi-exon	TRUE	canonical	2	2	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGCATTTCCACAGAG	NA	False	NA	NA	False	NA	NA	NA	14718603	14694076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_14694195_14698094_14698170_14701680_14701731_14718541
WTC11_00083232	chr7	-	309	1	FSM	ENSG00000235828.5	ENST00000476382.1	318	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTAAGCGTCATCTTT	NA	False	NA	NA	False	NA	NA	NA	15701749	15701440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_15701400_15701700
WTC11_00083233	chr7	-	3414	25	NIC	ENSG00000071189.21	novel	6357	26	NA	NA	57	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	28.7139871065576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTGGATTTGTTAT	-17937004	False	NA	-6	True	AATAAA	-33	NA	17940374	17793421	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
WTC11_00083234	chr7	-	3925	5	NNC	ENSG00000105849.6	novel	3893	4	NA	NA	0	8127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.157646347714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACACAGAAAGAGT	-19708341	True	NA	NA	False	NA	NA	NA	19709037	19687333	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19687367_19695461_19698728_19700071_19700281_19704778_19704921_19708762
WTC11_00083235	chr7	-	2372	4	FSM	ENSG00000173452.14	ENST00000405764.7	3975	4	198	1405	-1	1057	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTAACATTTGTATAGC	-19773156	False	NA	NA	False	AAAAAG	-9	NA	19773195	19720720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19722135_19725513_19725769_19729381_19729439_19772549
WTC11_00083236	chr7	-	9153	7	FSM	ENSG00000183742.13	ENST00000400331.10	9153	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.77551626063147	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTATGATTAAGTT	-20215782	True	NA	NA	False	AATAGA	-22	NA	20217384	20134654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20164255_20164400_20170713_20170779_20217298
WTC11_00083237	chr7	-	4834	3	NNC	ENSG00000164651.18	novel	1714	3	NA	NA	345	1066	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTGAGGCCTCCAGT	-20784665	False	NA	NA	False	AATATA	-45	NA	20786541	20781212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20785796_20785947_20786044_20786386
WTC11_00083238	chr7	-	4738	2	NNC	ENSG00000164651.18	novel	3626	2	NA	NA	345	1066	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTGAGGCCTCCAGT	-20784665	False	NA	NA	False	AATATA	-45	NA	20786541	20781212	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20785796_20786386
WTC11_00083241	chr7	-	904	4	FSM	ENSG00000105889.16	ENST00000483679.1	1054	4	0	150	0	23	multi-exon	FALSE	canonical	3	31	junction_3	6.59966329107444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGTAAATCTTCTTTT	-22499533	True	NA	NA	False	TATAAA	-8	NA	22500201	22492541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22492730_22493323_22493837_22494771_22494887_22500113
WTC11_00083243	chr7	-	597	4	NNC	ENSG00000196683.12	novel	434	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	3189.48128837416	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-22769765	True	NA	-4	True	AATAAA	-15	NA	22822810	22812973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22813186_22817999_22818049_22822153_22822356_22822676
WTC11_00083245	chr7	-	3757	8	NNC	ENSG00000136231.14	novel	4274	15	NA	NA	-256	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	48.7572077350872	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23470519	False	NA	-27	True	AATAAA	-22	NA	23470747	23310208	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343847_23469935
WTC11_00083246	chr7	-	417	2	FSM	ENSG00000164548.12	ENST00000486934.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACTCCTTAAGAAAAAAAC	-23506196	False	NA	NA	False	NA	NA	NA	23506208	23505467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505814_23506137
WTC11_00083251	chr7	-	485	5	FSM	ENSG00000153790.12	ENST00000443822.5	555	5	70	0	70	0	multi-exon	FALSE	canonical	2	5	junction_3	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGGCGCCATGTTCC	-25179210	False	NA	NA	False	NA	NA	NA	25179332	25155144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25155193_25158500_25158531_25161188_25161261_25168288_25168466_25179174
WTC11_00083252	chr7	-	1246	1	FSM	ENSG00000270933.1	ENST00000602992.1	747	1	-505	6	-505	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAAGTACGTCTTGTGTT	-25949883	False	NA	-6	True	AATAAA	-10	NA	25949908	25948662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25948700_25949900
WTC11_00083253	chr7	-	1742	12	NNC	ENSG00000122566.22	novel	3664	12	NA	NA	0	9817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2828.37831642559	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGCTAAGAAATTAA	-26115624	True	NA	NA	False	AAAAAG	-2	NA	26200746	26161333	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_26161365_26191843_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00083254	chr7	-	1741	12	NNC	ENSG00000122566.22	novel	3664	12	NA	NA	0	9817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2828.37831642559	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGCTAAGAAATTAA	-26115624	True	NA	NA	False	AAAAAG	-2	NA	26200746	26161333	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_26161364_26191843_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
WTC11_00083256	chr7	-	508	2	FSM	ENSG00000225792.2	ENST00000451264.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAGCTAGATAATTTA	NA	False	NA	NA	False	NA	NA	NA	26376701	26372331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26372569_26376430
WTC11_00083257	chr7	-	1111	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-59	4043	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.70502447189084	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCGGGAGCAATTTGTTA	NA	False	NA	2	True	AATAAA	-24	NA	29563750	29510180	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_29510432_29512811_29512984_29515056_29515318_29561858_29561923_29563387
WTC11_00083258	chr7	-	1175	4	NNC	ENSG00000223813.4	novel	1397	2	NA	NA	-7	4039	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.03957069398096	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563366	True	NA	-2	True	AATAAA	-20	NA	29563670	29510184	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29563387
WTC11_00083263	chr7	-	554	1	FSM	ENSG00000223419.1	ENST00000425261.1	388	1	-269	103	-269	-103	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGCTGCCAGGTGCA	NA	False	NA	NA	False	NA	NA	NA	30743087	30742533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30742500_30743100
WTC11_00083264	chr7	-	942	1	FSM	ENSG00000226468.2	ENST00000435950.1	796	1	-189	43	-189	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGATTTTGCTCTTACT	-32457802	False	NA	NA	False	NA	NA	NA	32457947	32457005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32457000_32457900
WTC11_00083265	chr7	-	570	3	ISM	ENSG00000205763.14	ENST00000685019.1	1145	5	21157	276	21157	-276	3prime_fragment	FALSE	canonical	1	1	junction_2	1	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTACGATTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	32921394	32917090	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_32917543_32918310_32918373_32921338
WTC11_00083266	chr7	-	1750	11	NNC	ENSG00000122643.23	novel	1742	10	NA	NA	0	59715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.715803355917	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGAGCAGGGCGGCCTGC	-33058969	True	NA	NA	False	NA	NA	NA	33062776	32954414	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_32954443_33014129_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
WTC11_00083269	chr7	-	945	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	0	61071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCATGGTGGTGCATG	-40122638	True	NA	NA	False	NA	NA	NA	40134622	40064955	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064994_40132746_40133260_40134228
WTC11_00083271	chr7	-	1783	2	ISM	ENSG00000106571.15	ENST00000678429.1	8237	15	-52	260687	-52	-18	5prime_fragment	FALSE	canonical	2	5	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACTTGGCTTCAGGAA	-42227757	False	1200	-24	True	AATAAA	-8	NA	42227773	42221635	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_42223296_42227650
WTC11_00083274	chr7	-	1341	3	NNC	ENSG00000272655.2	novel	1422	3	NA	NA	20	0	intron_retention	FALSE	canonical	3	7	junction_1	275.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-44018640	True	NA	NA	False	ATTAAA	-18	NA	44019093	44013561	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_44014780_44016433_44016524_44019060
WTC11_00083276	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.91070819942883	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-44141087	False	245	2	True	AATAAA	-20	NA	44141332	44138863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
WTC11_00083277	chr7	-	2185	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	139	junction_10	204.18481824073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098324	True	NA	-3	True	NA	NA	NA	45111677	45100099	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
WTC11_00083278	chr7	-	3409	9	FSM	ENSG00000136270.14	ENST00000495973.5	3409	9	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	68.853898763977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-45094111	False	NA	-4	True	NA	NA	NA	45107464	45100100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440
WTC11_00083279	chr7	-	4309	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	60	-2547	0	0	multi-exon	FALSE	canonical	3	64	junction_1	31.1839702411351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTGCATCCTGAGC	-45766713	True	NA	NA	False	AATAAA	-27	NA	45768954	45723783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00083280	chr7	-	1645	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	70	1	6	-1	multi-exon	FALSE	canonical	2	27	junction_1	55.4007495938056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATCATTGCATCCTGAG	-45766707	True	NA	NA	False	AATAAA	-26	NA	45768948	45723784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00083281	chr7	-	1467	11	FSM	ENSG00000214765.9	ENST00000689783.1	1492	11	25	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	47.1978813083808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	-45766713	True	NA	NA	False	AATAAA	-23	NA	45768954	45723787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45724024_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
WTC11_00083283	chr7	-	511	3	FSM	ENSG00000146674.16	ENST00000417621.5	810	3	0	299	0	-299	multi-exon	FALSE	canonical	3	15	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTGTCCTTGGACCAG	-45917209	False	NA	NA	False	GGGGCT	-7	NA	45917426	45914768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45914946_45916547_45916668_45917212
WTC11_00083284	chr7	-	7613	31	NNC	ENSG00000136205.17	novel	7585	31	NA	NA	2161	2	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_30	15.3898956750489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTGAGACGGTATTTGT	-47536971	False	NA	-7	True	AATAAA	-19	NA	47537116	47275151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47537029
WTC11_00083286	chr7	-	5293	18	NNC	ENSG00000106070.20	novel	5468	19	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_17	167.431832950372	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-50792846	False	NA	-11	True	AATAAA	-26	NA	50792863	50590062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50792460
WTC11_00083287	chr7	-	4952	17	NIC	ENSG00000106070.20	novel	2156	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_16	154.033072747381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-50784004	True	NA	-11	True	AATAAA	-26	NA	50793436	50590062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50793223
WTC11_00083288	chr7	-	2529	18	NNC	ENSG00000106070.20	novel	2156	18	NA	NA	-180	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	181.863213360213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50781326	False	NA	-17	True	ATTAAA	-14	NA	50782625	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50732271_50732369_50782415
WTC11_00083289	chr7	-	2745	17	NNC	ENSG00000106070.20	novel	5431	18	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_16	152.986927546114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50781585	True	NA	-17	True	ATTAAA	-14	NA	50782884	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50782415
WTC11_00083290	chr7	-	2755	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	-139	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	169.215102355115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50792806	False	NA	-17	True	ATTAAA	-14	NA	50792823	50592579	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50792441
WTC11_00083291	chr7	-	769	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	-411	0	411	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGCCTAACTCTGGCTT	-65003974	True	NA	NA	False	NA	NA	NA	65006659	65005672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65006323_65006540
WTC11_00083292	chr7	-	411	1	FSM	ENSG00000272693.5	ENST00000647241.1	248	1	-60	-103	30	103	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGAGGCTGCCCCGCGT	-65770531	True	NA	NA	False	NA	NA	NA	65770780	65770369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65770400_65770800
WTC11_00083293	chr7	-	1764	9	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	122.26757286787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGAAATCATTTCTG	-65977874	True	NA	-8	True	AATAAA	-28	NA	65982196	65960684	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294_65974442_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
WTC11_00083294	chr7	-	1424	7	NIC	ENSG00000169919.17	novel	1859	10	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	157.325211654783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATCTGAAATCATTTC	-65977864	True	NA	-10	True	AATAAA	-26	NA	65982186	65960686	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294_65974442_65976014_65976203_65980223_65980410_65981973
WTC11_00083295	chr7	-	1752	9	NIC	ENSG00000169919.17	novel	1983	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	124.321910780039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAAGCATCTGAAATCA	-65977874	True	NA	-14	True	AATAAA	-45	NA	65982196	65960690	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65980223_65980410_65981973
WTC11_00083297	chr7	-	4391	3	NNC	ENSG00000179406.9	novel	556	4	NA	NA	-891	-31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTGGTTTCAGTGA	NA	False	NA	-20	True	AATAAA	-4	NA	66394620	66376074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66380004_66382236_66382428_66394349
WTC11_00083298	chr7	-	1016	12	FSM	ENSG00000179406.9	ENST00000442578.5	1016	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	6.88992557145324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAAGCCCTCCTGGTT	-66487349	False	NA	NA	False	NA	NA	NA	66487990	66409142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66409245_66411614_66411703_66427948_66428041_66429678_66429758_66429883_66430018_66450070_66450237_66467681_66467720_66476258_66476328_66479008_66479097_66481540_66481600_66485094_66485154_66487948
WTC11_00083299	chr7	-	489	1	FSM	ENSG00000231234.2	ENST00000438081.1	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTGCCTGACACTGT	NA	False	NA	NA	False	NA	NA	NA	66423893	66423404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66423400_66423900
WTC11_00083300	chr7	-	888	4	NNC	ENSG00000244510.2	novel	265	4	NA	NA	-1528	-2467	intron_retention	FALSE	canonical	1	1	junction_1	4.98887651569859	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCCCTTTTTTCCAGTC	-66490995	False	NA	NA	False	NA	NA	NA	66491636	66482860	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66482883_66487948_66488039_66489937_66490108_66491030
WTC11_00083301	chr7	-	1886	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-43	23028	10	150	5prime_fragment	FALSE	canonical	3	67	junction_1	17.4419672692682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATTTCTTTAAAAAAAAAA	-66590229	True	NA	NA	False	ATTAAA	-15	NA	66592376	66553334	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
WTC11_00083302	chr7	-	324	1	FSM	ENSG00000177418.2	ENST00000325130.2	474	1	137	13	137	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCTCCAGCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	66557225	66556901	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66556900_66557200
WTC11_00083303	chr7	-	360	1	FSM	ENSG00000271064.1	ENST00000603786.1	240	1	8	-128	8	128	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTTCAGGACTGCAA	NA	False	NA	NA	False	TATAAA	-38	NA	66749069	66748709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66748700_66749100
WTC11_00083304	chr7	-	1733	6	NNC	ENSG00000126524.11	novel	1613	5	NA	NA	-83	3762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.992203132241	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGGCTAGGAGAAAATA	-66995609	False	NA	NA	False	NA	NA	NA	66995669	66983917	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66983946_66987670_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
WTC11_00083305	chr7	-	709	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	-111	34	-100	-30	multi-exon	FALSE	canonical	3	15	junction_4	3.41869858279434	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAATTAAACCTCTTT	-67302537	False	NA	NA	False	NA	NA	NA	67302585	67292461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
WTC11_00083307	chr7	-	1122	6	ISM	ENSG00000277149.5	ENST00000620995.5	3117	14	-25	227761	-25	-73430	5prime_fragment	FALSE	canonical	3	18	junction_4	5.87877538267963	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATAATTTTTTTGCCA	-72827543	True	NA	NA	False	NA	NA	NA	72828225	72802273	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
WTC11_00083308	chr7	-	1662	5	NIC	ENSG00000106133.18	novel	1647	12	NA	NA	0	-6	intron_retention	FALSE	canonical	3	9	junction_2	244.529650553875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTTTTTTCTTTTAA	-72953849	True	NA	NA	False	AATAAA	-19	NA	72954720	72947586	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_72948809_72948891_72948981_72949845_72949962_72950057_72950197_72954624
WTC11_00083309	chr7	-	1370	8	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	36	junction_6	204.357829429116	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCACAGTTTTTTATTC	-72953835	True	NA	-3	True	AATAAA	-21	NA	72954706	72948294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
WTC11_00083310	chr7	-	1183	7	NIC	ENSG00000106133.18	novel	1647	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	18	junction_2	214.547909697474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCACAGTTTTTTATTC	-72953849	True	NA	-3	True	AATAAA	-21	NA	72954720	72948294	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
WTC11_00083318	chr7	-	610	4	FSM	ENSG00000165171.11	ENST00000493174.1	823	4	0	213	0	-213	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGCAGCCTCCTTTTC	-73842240	True	NA	NA	False	NA	NA	NA	73842516	73839793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73840121_73841069_73841199_73842017_73842145_73842489
WTC11_00083319	chr7	-	1365	12	NNC	ENSG00000049541.11	novel	1685	11	NA	NA	0	55209	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	343.782123968555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCTTGGGCAACAAGA	-74243021	True	NA	NA	False	NA	NA	NA	74254309	74176289	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74176326_74231767_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00083320	chr7	-	1484	12	NNC	ENSG00000049541.11	novel	1685	11	NA	NA	0	44710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.782123968555	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTTGTTGCCTGATT	-74243021	True	NA	NA	False	NA	NA	NA	74254309	74186788	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74186841_74231664_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
WTC11_00083321	chr7	-	1703	2	FSM	ENSG00000196275.16	ENST00000484624.1	2047	2	290	54	290	-54	multi-exon	FALSE	canonical	3	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGTTTTATCAAATAAA	NA	False	NA	NA	False	AAAAAG	-37	NA	74820934	74818860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74819598_74819968
WTC11_00083322	chr7	-	8079	32	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27390	35187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.6168716493803	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTAGGAGCATCTGGTG	-75635321	True	NA	NA	False	NA	NA	NA	75639233	75498110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75498143_75533301_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
WTC11_00083323	chr7	-	1008	9	FSM	ENSG00000127957.19	ENST00000430602.5	1005	9	0	-3	0	0	multi-exon	FALSE	canonical	1	2	junction_8	12.6484929932384	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCTCATAGTTCTT	-75527821	False	34	NA	False	ATTAAA	-21	NA	75527836	75507746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527770
WTC11_00083324	chr7	-	815	2	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCTAAAGTCCTAATG	-75635317	True	NA	-8	True	AATAAA	-23	NA	75639229	75631640	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_75632277_75639050
WTC11_00083325	chr7	-	668	4	FSM	ENSG00000006606.9	ENST00000394905.2	703	4	37	-2	37	2	multi-exon	FALSE	canonical	2	2	junction_3	120.169324982155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATAACATTTTTTGTC	NA	False	NA	-10	True	AATAAA	-21	NA	75789859	75769530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75769790_75771888_75772004_75772103_75772255_75789716
WTC11_00083326	chr7	-	418	2	FSM	ENSG00000189077.11	ENST00000484946.5	610	2	194	-2	61	0	multi-exon	FALSE	canonical	3	224	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCGTGTGTGTTCTCCT	-75985833	False	NA	-1	True	AATAAA	-19	NA	75987474	75986982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987286_75987359
WTC11_00083328	chr7	-	919	7	NIC	ENSG00000127952.17	novel	1411	9	NA	NA	36	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_1	85.2831883915126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045701	True	NA	-14	True	NA	NA	NA	76047917	75996341	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030528_76047811
WTC11_00083329	chr7	-	1202	9	NNC	ENSG00000127952.17	novel	1411	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	87.978335401393	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76033635_76033707_76047811
WTC11_00083330	chr7	-	3700	1	FSM	ENSG00000230882.1	ENST00000421546.1	3495	1	6	-211	6	211	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGCTGTTAGATAGAA	NA	False	NA	51	True	NA	NA	NA	76074957	76071257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76071300_76075000
WTC11_00083331	chr7	-	1587	8	FSM	ENSG00000146707.15	ENST00000424818.5	1587	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	32.4540491483335	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCCTGTGTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	76627261	76610027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76618496_76618616_76625521_76625684_76625999_76626216_76626707
WTC11_00083334	chr7	-	7532	38	NIC	ENSG00000153956.16	novel	7542	39	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_20	13.6151850944836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCGGTTTGGGTTTTCT	-82442150	True	NA	-2	True	AATAAA	-20	NA	82443788	81946443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_81950509_81959274_81959358_81959719_81959830_81961893_81962024_81962439_81962496_81964055_81964109_81964206_81964360_81965593_81965666_81967168_81967208_81967595_81967664_81968886_81968974_81969880_81969985_81970674_81970738_81971776_81971865_81974454_81974553_81982566_81982628_81984634_81984712_81991184_81991247_81994867_81994940_81997178_81997251_82005422_82005498_82005764_82005840_82007678_82007757_82012153_82012244_82013460_82013511_82014400_82014480_82032796_82032902_82038076_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
WTC11_00083335	chr7	-	7180	5	ISM	ENSG00000153956.16	ENST00000356860.8	7542	39	478534	12	-961	-12	intron_retention	FALSE	canonical	3	51	junction_3	5.31507290636732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAAGTCACCACGCGG	NA	False	NA	-14	True	AATAAA	-8	NA	81965243	81946455	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_81950509_81959274_81959358_81959719_81959830_81961893_81962024_81962439
WTC11_00083336	chr7	-	369	2	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	118	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCACAGGGGATGCGAT	NA	False	NA	NA	False	NA	NA	NA	83465349	83459715	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_83459853_83465117
WTC11_00083337	chr7	-	6092	18	NIC	ENSG00000075213.11	novel	2550	18	NA	NA	-41	-1965	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	37.6217745976374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAACATTATTTTTC	-84195071	True	NA	-25	True	AATACA	-12	NA	84195202	83957741	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195137
WTC11_00083338	chr7	-	5437	17	NNC	ENSG00000075213.11	novel	8113	17	NA	NA	44376	-2575	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_16	39.2212773090067	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAATATTTGAATTCAG	-84150359	False	198	-13	True	AATACA	-7	NA	84150413	83958351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84150199
WTC11_00083339	chr7	-	4315	1	NIC	ENSG00000153993.14	novel	6772	19	NA	NA	42072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTTTGTGTGCAAAT	NA	False	NA	NA	False	AATAAA	-33	NA	84999867	84995552	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_84995600_84999900
WTC11_00083340	chr7	-	5266	24	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19309	-1454	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_17	59.5148628797184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCATCTTTGGGAAGG	-87038076	True	NA	NA	False	ATTAAA	-16	NA	87040206	86878359	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86941351_86941386_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87039755_87039872_87040102
WTC11_00083341	chr7	-	3784	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19314	172	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_21	42.8270264553977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACGAGAAGCCCTAATT	-87038071	False	NA	NA	False	AAAAAG	-8	NA	87040201	86879766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755_87039872_87040017
WTC11_00083342	chr7	-	3710	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19303	172	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_20	38.7193518620441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACGAGAAGCCCTAATT	-87038082	True	NA	NA	False	AAAAAG	-8	NA	87040212	86879766	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755_87039872_87040102
WTC11_00083345	chr7	-	2982	2	FSM	ENSG00000182165.19	ENST00000654969.1	2982	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGCACTTATGTATCT	-87343602	True	NA	NA	False	TATAAA	-5	NA	87345488	87339148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87341685_87345042
WTC11_00083346	chr7	-	542	5	FSM	ENSG00000005471.19	ENST00000473795.1	1115	5	1	572	1	-572	multi-exon	FALSE	canonical	0	0	junction_4	2.69258240356725	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTACATTGTTAATGTC	-87475459	False	NA	NA	False	NA	NA	NA	87475471	87452943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87453136_87454534_87454593_87462757_87462909_87472620_87472676_87475385
WTC11_00083347	chr7	-	1564	1	FSM	ENSG00000228928.1	ENST00000419546.1	1489	1	150	-225	150	225	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTGAATGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	88566131	88564567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_88564600_88566100
WTC11_00083348	chr7	-	369	3	NNC	ENSG00000127989.14	novel	380	5	NA	NA	0	69934	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	78	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGTCTGTGTACCTC	-91878834	True	NA	NA	False	AATAAA	-24	NA	91880692	91800994	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_91801269_91880054_91880114_91880656
WTC11_00083349	chr7	-	3106	18	NNC	ENSG00000001631.17	novel	4079	19	NA	NA	0	22984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.0400109581446	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATATATATA	-92244138	False	NA	NA	False	NA	NA	NA	92244149	92174513	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_92174539_92200015_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001
WTC11_00083350	chr7	-	4015	19	NIC	ENSG00000001631.17	novel	4079	19	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_18	27.1325052198682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-92243207	True	NA	-22	True	AATAAA	-19	NA	92245887	92199412	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245789
WTC11_00083356	chr7	-	1713	12	FSM	ENSG00000127990.19	ENST00000445866.7	1704	12	0	-9	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.1150595916811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652796	True	NA	NA	False	AATAAA	-40	NA	94656146	94585222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94597929_94598005_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
WTC11_00083360	chr7	-	1881	12	NIC	ENSG00000070669.17	novel	2385	13	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_11	159.024765470847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCATTGCTGTAGTCAT	-97867084	True	NA	-9	True	AATAAA	-12	NA	97872395	97852131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97872350
WTC11_00083361	chr7	-	772	5	FSM	ENSG00000070669.17	ENST00000442734.5	828	5	56	0	4	0	multi-exon	FALSE	canonical	1	1	junction_4	208.690410656551	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGACAATGTGGAGAAAC	-97866798	False	NA	NA	False	NA	NA	NA	97872109	97859241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872040
WTC11_00083362	chr7	-	1381	4	Fusion	ENSG00000284627.1_ENSG00000284707.2	novel	1088	2	NA	NA	-8124	5308	intron_retention	FALSE	canonical	1	2	junction_3	16.3095064303001	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTTTTAATAATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	97953499	97922773	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_97923084_97928081_97928778_97937079_97937161_97953205
WTC11_00083366	chr7	-	1247	6	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	0	55566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	313.184290793775	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACCTATGATCCAAAC	-99404413	False	46783	NA	False	NA	NA	NA	99404942	99336481	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99336510_99395984_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861
WTC11_00083367	chr7	-	1309	7	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	4	55566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	286.890029260149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACCTATGATCCAAAC	-99361803	True	NA	NA	False	NA	NA	NA	99408586	99336481	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99336510_99395984_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
WTC11_00083368	chr7	-	1322	7	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	0	47128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	286.890029260149	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTATCTGTAGGAA	-99361814	True	NA	NA	False	AAAAAG	-1	NA	99408597	99344919	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99344950_99395984_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
WTC11_00083369	chr7	-	653	1	FSM	ENSG00000228335.1	ENST00000434352.1	607	1	9	-55	9	55	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTTGGTCACATATA	NA	False	NA	NA	False	NA	NA	NA	99443487	99442834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99442800_99443500
WTC11_00083372	chr7	-	2176	4	NNC	ENSG00000160908.15	novel	542	4	NA	NA	0	7151	intron_retention	FALSE	non_canonical	0	0	junction_1	47.9884245301811	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCTGGAAGTGGT	-99497570	True	NA	NA	False	NA	NA	NA	99500264	99466725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99466754_99493237_99494632_99498715_99498843_99499637
WTC11_00083373	chr7	-	394	2	Genic_Genomic	ENSG00000221909.3	novel	1943	2	NA	NA	43	-10951	multi-exon	FALSE	canonical	2	9	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGGCATTTTATATA	-99558257	True	NA	-1	True	ATTAAA	-14	NA	99558493	99557751	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_99557902_99558249
WTC11_00083376	chr7	-	2415	16	NNC	ENSG00000166508.18	novel	2467	15	NA	NA	0	48956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	552.813892734255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAGAAAGAAAAGAAAAAG	-100079089	True	NA	NA	False	NA	NA	NA	100101370	100043771	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100043799_100092779_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00083377	chr7	-	2426	16	NNC	ENSG00000166508.18	novel	2467	15	NA	NA	0	41454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	552.813892734255	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATCCCTAGGCAGCCAAA	-100079089	True	NA	NA	False	AAAAAG	-9	NA	100101370	100051273	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100051312_100092779_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
WTC11_00083379	chr7	-	2949	15	FSM	ENSG00000106290.16	ENST00000421980.5	2685	15	0	-264	0	70	multi-exon	FALSE	canonical	1	12	junction_11	353.696031435272	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGCCAGCCTGAGGAAT	-100105910	True	NA	NA	False	NA	NA	NA	100119359	100106805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113679_100113770_100113867_100113955_100114053_100114269_100118879
WTC11_00083380	chr7	-	2532	16	FSM	ENSG00000106290.16	ENST00000692927.1	2764	16	30	202	0	0	multi-exon	FALSE	canonical	3	108	junction_15	328.574226351097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-100105893	True	NA	-11	True	AATAAA	-14	NA	100119342	100107077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118517_100118650_100119203
WTC11_00083384	chr7	-	2551	10	NIC	ENSG00000213420.8	novel	2546	10	NA	NA	17	0	combination_of_known_junctions	TRUE	canonical	3	6	junction_4	39.9882698849933	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGTGTGGCTTCTGTG	-100173384	True	NA	-5	True	AATAAA	-16	NA	100177352	100169605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100170484_100171260_100171437_100171538_100171679_100171778_100171960_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
WTC11_00083386	chr7	-	620	2	FSM	ENSG00000078487.18	ENST00000479315.1	666	2	0	46	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGGCTGGTCTCTAA	NA	False	NA	-18	True	AATAAA	-16	NA	100402043	100400871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100401337_100401888
WTC11_00083387	chr7	-	910	5	FSM	ENSG00000078487.18	ENST00000464510.5	1300	5	-48	438	-48	-25	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGAATTTGAGGAGATT	-100424010	False	NA	NA	False	NA	NA	NA	100429040	100419170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
WTC11_00083388	chr7	-	1688	6	NIC	ENSG00000224729.6	novel	2537	9	NA	NA	-154	1	intron_retention	FALSE	canonical	1	2	junction_1	3.97994974842648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACATCTTTATTTCAGG	-100601914	False	NA	0	True	AATAAA	-17	NA	100602011	100589400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100590083_100590229_100590332_100592824_100593075_100599670_100599803_100600722_100600853_100601619
WTC11_00083389	chr7	-	2627	16	FSM	ENSG00000106327.13	ENST00000431692.5	2631	16	0	4	0	0	multi-exon	FALSE	canonical	1	2	junction_15	5.88179866669674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTTGACATCTGTT	-100641400	False	NA	NA	False	AATAAA	-18	NA	100641550	100620419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100633000_100633124_100633228_100633341_100633415_100633557_100640685_100640873_100640975_100641229_100641476
WTC11_00083392	chr7	-	707	6	ISM	ENSG00000077080.10	ENST00000487125.1	947	7	443	-44	443	-1	3prime_fragment	FALSE	canonical	2	2	junction_5	10.3072789813801	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCCTCCGTGGGGTG	-100647145	True	NA	NA	False	AGTAAA	-19	NA	100647295	100643097	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647112_100647222
WTC11_00083394	chr7	-	1766	6	NNC	ENSG00000196411.10	novel	3737	14	NA	NA	0	35097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.481512799562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCAAAAAACTGGGAGCAG	-100807546	False	NA	NA	False	NA	NA	NA	100807579	100767467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100767495_100802566_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364
WTC11_00083395	chr7	-	4542	16	FSM	ENSG00000196411.10	ENST00000487222.5	5058	16	516	0	516	0	multi-exon	FALSE	canonical	3	343	junction_7	55.3325301146522	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATGGGGGTGATGGACT	-100824950	False	NA	-10	True	AATAAA	-29	NA	100825010	100802567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202
WTC11_00083397	chr7	-	2463	2	FSM	ENSG00000128564.8	ENST00000249330.3	2551	2	88	0	88	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTCGGTTATTCAC	-101165453	False	NA	-1	True	AATAAA	-20	NA	101165481	101162508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101164864_101165373
WTC11_00083398	chr7	-	732	3	ISM	ENSG00000106404.14	ENST00000433833.1	832	6	4452	-311	4452	0	3prime_fragment	FALSE	canonical	3	13	junction_2	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTTGAAGGTGTCAGA	-101232998	False	NA	-30	True	AATAAA	-18	NA	101233025	101232093	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_101232516_101232603_101232721_101232832
WTC11_00083400	chr7	-	1023	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	-18	0	0	multi-exon	FALSE	canonical	2	3	junction_4	265.854283395999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101251197	True	NA	14	True	AATAAA	-39	NA	101252291	101239593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
WTC11_00083402	chr7	-	5677	17	ISM	ENSG00000170667.15	ENST00000465829.6	6095	21	10953	53	10931	-53	3prime_fragment	TRUE	canonical	2	21	junction_15	12.4585249427852	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTAGAGCGAGGATTAT	NA	False	NA	-55	True	NA	NA	NA	102506824	102480028	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102490985_102491124_102493115_102493286_102493824_102493970_102494537_102494676_102494880_102495074_102495277_102495391_102496139_102496205_102496468_102496620_102496846_102496965_102500698_102500794_102501095_102501228_102503162_102503245_102506694
WTC11_00083403	chr7	-	1452	8	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	175.652950967735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572371	True	NA	-19	True	AATAAA	-16	NA	102572539	102537918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572442
WTC11_00083410	chr7	-	4493	10	ISM	ENSG00000105808.19	ENST00000461209.5	3244	20	16999	-2671	-132	-6	3prime_fragment	FALSE	canonical	2	22	junction_9	11.9701274269443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATACATGGCCTGGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	102594592	102579651	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446
WTC11_00083411	chr7	-	610	4	ISM	ENSG00000105808.19	ENST00000522801.5	967	9	16358	-153	2016	153	3prime_fragment	TRUE	canonical	2	23	junction_2	2.16024689946929	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGACAGTGGGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	102600380	102595511	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102595785_102596011_102596130_102599859_102599955_102600256
WTC11_00083412	chr7	-	341	4	FSM	ENSG00000105808.19	ENST00000522443.5	558	4	14	203	-3	-203	multi-exon	FALSE	canonical	2	6	junction_3	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCCCTTCCCTCC	-102616687	True	NA	NA	False	NA	NA	NA	102616732	102608760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102608823_102609340_102609455_102611085_102611143_102616624
WTC11_00083415	chr7	-	353	3	ISM	ENSG00000233297.4	ENST00000460726.2	1199	9	803	6371	803	-6371	internal_fragment	FALSE	canonical	3	19	junction_2	13	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTCCAAGGTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	102689666	102688206	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102688365_102688903_102689049_102689616
WTC11_00083416	chr7	-	411	1	FSM	ENSG00000233025.1	ENST00000428923.1	947	1	-61	597	-61	-597	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATCCCATATCTTACT	NA	False	NA	NA	False	TTTAAA	-14	NA	103089671	103089260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103089300_103089700
WTC11_00083417	chr7	-	638	2	FSM	ENSG00000239569.4	ENST00000687813.1	652	2	12	2	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGATTCCGGCTCTTG	-105013674	True	NA	NA	False	AATAAA	-25	NA	105014074	105013282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105013727_105013880
WTC11_00083419	chr7	-	3932	16	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	195	-18	intron_retention	FALSE	canonical	3	34	junction_2	82.8000536768479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTTTTTCCAG	-105389184	False	NA	-22	True	ATTAAA	-5	NA	105389195	105116394	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_105118023_105125781_105125875_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
WTC11_00083420	chr7	-	3290	15	NIC	ENSG00000091127.14	novel	3525	16	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	137.610215567637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	-105515630	True	NA	-3	True	AATAAA	-28	NA	105522254	105456502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470760_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105505954_105506057_105506188_105506274_105508114_105508545_105522051
WTC11_00083421	chr7	-	1222	1	FSM	ENSG00000231167.3	ENST00000489612.1	999	1	180	-403	180	403	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAAAGAACTCTCCAC	NA	False	NA	-10	True	AATAAA	-16	NA	105583076	105581854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105581900_105583100
WTC11_00083422	chr7	-	4897	5	ISM	ENSG00000146776.15	ENST00000477775.5	2426	10	54896	-3430	0	431	3prime_fragment	FALSE	canonical	3	39	junction_2	31.1809236553377	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAAAACAAAGTCTTCG	NA	False	NA	NA	False	AATAAA	-13	NA	105624266	105604340	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105607894_105610528_105610604_105613861_105614817_105620199_105620322_105624074
WTC11_00083423	chr7	-	1212	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38873	6622	-14879	137	internal_fragment	FALSE	canonical	3	120	junction_1	25.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTGAAGTCAGGATG	-105639026	False	NA	NA	False	AATAAA	-30	NA	105639145	105620095	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105620322_105624074_105624268_105638352
WTC11_00083424	chr7	-	380	3	FSM	ENSG00000146776.15	ENST00000481880.5	870	3	9	481	-1	-481	multi-exon	FALSE	canonical	3	47	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGACCCCTGCACCG	-105875698	True	NA	NA	False	NA	NA	NA	105876583	105788603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105788709_105875811_105875881_105876377
WTC11_00083426	chr7	-	6052	1	FSM	ENSG00000253276.5	ENST00000523505.3	6799	1	-3	750	-3	-750	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACATATCTAAAGCCC	-106659476	True	NA	NA	False	NA	NA	NA	106661161	106655109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106655100_106661200
WTC11_00083427	chr7	-	2963	20	NIC	ENSG00000164597.15	novel	4658	22	NA	NA	16	-1289	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	35.5718616425992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGTCATGTTATTAAA	-107561505	True	NA	-1	True	AATAAA	-16	NA	107563904	107202843	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_107203631_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
WTC11_00083428	chr7	-	5776	33	ISM	ENSG00000091136.15	ENST00000222399.11	5650	34	13	0	12	0	intron_retention	FALSE	canonical	3	170	junction_28	56.9524798488837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-107997830	True	NA	-1	True	AATAAA	-21	NA	108003148	107923798	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848
WTC11_00083429	chr7	-	1752	8	NNC	ENSG00000184903.10	novel	1205	7	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.4367881777848	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGTTTATGAAAGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	111562570	110662643	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_110663722_110886592_110886696_110963499_110963566_111417258_111417343_111487237_111487342_111521312_111521450_111561850_111561924_111562463
WTC11_00083430	chr7	-	421	5	FSM	ENSG00000184903.10	ENST00000452753.1	421	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	50.3556104123463	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAGTAACTCAGAAGCA	-111560544	True	NA	NA	False	NA	NA	NA	111562504	111487239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_111487342_111521312_111521450_111532517_111532586_111561850_111561924_111562463
WTC11_00083432	chr7	-	514	5	FSM	ENSG00000164603.12	ENST00000485446.1	528	5	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_4	19.9170153386495	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTTACAGCTTCAGCA	-112938099	False	NA	NA	False	TATAAA	-10	NA	112939284	112822352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939219
WTC11_00083436	chr7	-	4217	19	FSM	ENSG00000128513.16	ENST00000664366.1	3091	19	17	-1143	10	0	multi-exon	FALSE	canonical	1	2	junction_18	17.8558182930265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-124929567	False	NA	-2	True	AATAAA	-18	NA	124929785	124822385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929457
WTC11_00083442	chr7	-	4448	23	FSM	ENSG00000064419.14	ENST00000627585.2	4514	23	61	5	-1	0	multi-exon	TRUE	canonical	0	0	junction_13	8.00516362281866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	-129050571	True	NA	-6	True	AATAAA	-15	NA	129055112	128954184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990203_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
WTC11_00083448	chr7	-	3034	20	FSM	ENSG00000158623.14	ENST00000330992.8	3073	20	0	39	0	-39	multi-exon	FALSE	canonical	3	112	junction_3	13.0958537347342	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTACAGAGTTACAATAAA	-130660554	True	NA	NA	False	NA	NA	NA	130668705	130546825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
WTC11_00083449	chr7	-	1900	7	FSM	ENSG00000236753.7	ENST00000670684.1	1900	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.71404520791032	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCTGTCTCTACT	-131327605	True	NA	NA	False	NA	NA	NA	131327763	131309926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326936_131327614
WTC11_00083451	chr7	-	5918	9	NNC	ENSG00000128567.17	novel	5986	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	217	junction_1	560.200285054372	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-131521552	True	NA	-14	True	ATTAAA	-16	NA	131556563	131500270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131504506_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
WTC11_00083465	chr7	-	3733	20	NNC	ENSG00000146966.13	novel	3874	20	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	14.1900437180518	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	-140640631	False	NA	28	True	ATTAAA	-14	NA	140640675	140518419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574006_140585588_140585711_140587652_140587781_140601402_140602543_140605704_140605807_140640503
WTC11_00083466	chr7	-	7537	10	NIC	ENSG00000257093.7	novel	7309	9	NA	NA	0	3888	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	36.083579248157	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCATCGCTTCATACTC	NA	False	NA	NA	False	NA	NA	NA	141702166	141652839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_141652884_141656543_141662852_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
WTC11_00083473	chr7	-	6366	14	Fusion	ENSG00000289604.1_ENSG00000204959.4	novel	4532	12	NA	NA	-7258	490	multi-exon	FALSE	canonical	0	0	junction_9	201.865325074555	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTCAAAATGCCATTAA	NA	False	NA	NA	False	TATAAA	-1	NA	144294224	144266183	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_144270871_144272444_144272516_144273959_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278314_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144286782_144286979_144294117
WTC11_00083474	chr7	-	4532	12	FSM	ENSG00000204959.4	ENST00000483587.1	4532	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	184.402900606433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGGGTCTAAGAGG	-144286630	False	NA	NA	False	NA	NA	NA	144286966	144272444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144272516_144273959_144274122_144274745_144274904_144276351_144276442_144276878_144276954_144277207_144277338_144277606_144277760_144278312_144278475_144282280_144282535_144282725_144282791_144283223_144283282_144283812
WTC11_00083478	chr7	-	598	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	172	junction_4	82.1047349426329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAATTACCCAGTCT	-144355073	False	NA	NA	False	AATAAA	-9	NA	144355218	144307153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144354981
WTC11_00083484	chr7	-	1947	3	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	32	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATTCTGAAAAGGCTT	-146245474	True	NA	-11	True	AATAAA	-17	NA	146248917	146233455	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146235042_146238742_146238854_146248667
WTC11_00083485	chr7	-	1582	4	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	15	junction_2	18.624953392932	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTAGCATTCCTCTTTC	-146245477	True	NA	NA	False	AATAAA	-20	NA	146248920	146236491	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146237516_146238742_146238854_146246566_146246761_146248667
WTC11_00083486	chr7	-	2458	19	NIC	ENSG00000106462.12	novel	2466	20	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	79.1708770810187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877906	True	NA	-18	True	AATAAA	-18	NA	148884254	148807382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846496_148846599_148847181_148847306_148884163
WTC11_00083487	chr7	-	2529	20	NIC	ENSG00000106462.12	novel	2707	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	99.1767497996936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877921	True	NA	-18	True	AATAAA	-18	NA	148884269	148807382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
WTC11_00083488	chr7	-	2365	19	NIC	ENSG00000106462.12	novel	2707	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	117.051389473931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877921	True	NA	-18	True	AATAAA	-18	NA	148884269	148807382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817876_148818118_148818977_148819060_148819595_148819688_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
WTC11_00083489	chr7	-	2247	17	NIC	ENSG00000106462.12	novel	2535	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_16	85.1659226157975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877921	True	NA	-18	True	AATAAA	-18	NA	148884269	148807382	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148884163
WTC11_00083490	chr7	-	2706	21	NNC	ENSG00000106462.12	novel	2707	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	106.457444549454	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877966	True	NA	-18	True	AATAAA	-18	NA	148884314	148807382	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846588_148847181_148847306_148884163
WTC11_00083499	chr7	-	2366	8	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	4	-2	intron_retention	FALSE	canonical	3	34	junction_4	146.920219916825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCCGTTGTGAATCTC	-151071336	False	NA	21	True	ATTAAA	-9	NA	151080786	151076630	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077878_151078093_151078561_151078702_151078841_151079022_151079499
WTC11_00083501	chr7	-	1566	3	FSM	ENSG00000164897.14	ENST00000392818.7	1563	3	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_2	240	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTGTGTCTGAGTGTG	-151073641	False	NA	-4	True	ATTAAA	-22	NA	151083091	151081081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151081901_151082174_151082594_151082763
WTC11_00083503	chr7	-	4913	15	NIC	ENSG00000033050.9	novel	4527	15	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	80.1574025506907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	-151222284	True	NA	-2	True	AATACA	-15	NA	151227166	151211483	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151226737
WTC11_00083507	chr7	-	1980	12	NNC	ENSG00000106617.15	novel	2696	14	NA	NA	11212	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_11	44.2735672871588	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATGAGGATAGTTT	NA	False	NA	-37	True	NA	NA	NA	151620673	151556210	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595452_151620636
WTC11_00083511	chr7	-	3909	22	NNC	ENSG00000157212.19	novel	3990	22	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.4194259699833	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-155001351	True	NA	-6	True	AATAAA	-20	NA	155003042	154943686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986055_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00083512	chr7	-	3983	22	NIC	ENSG00000157212.19	novel	3990	22	NA	NA	7	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.9305423796251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-155001386	True	NA	-6	True	AATAAA	-20	NA	155003077	154943686	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986016_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
WTC11_00083514	chr7	-	3281	16	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	3	-58	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	91.0646656685969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCTAGATACTTGGAAA	-156887809	True	NA	-65	True	NA	NA	NA	156893154	156682268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_156684164_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
WTC11_00083518	chr7	-	336	2	FSM	ENSG00000146918.20	ENST00000621338.1	597	2	261	0	261	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTGACAGATGTGT	-158685196	False	NA	-103	True	NA	NA	NA	158696390	158693411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158693498_158696140
WTC11_00083521	chr7	+	784	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGATGGCGAGGCCTC	NA	False	NA	NA	False	TTTAAA	-28	NA	4591818	4592602	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_4591800_4592600
WTC11_00083522	chr7	+	1020	1	FSM	ENSG00000289109.1	ENST00000691216.1	726	1	120	-414	120	414	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAAGTAGAAGTAATC	23474462	True	NA	NA	False	AGTAAA	-9	NA	23474766	23475786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23474800_23475800
WTC11_00083523	chr7	+	620	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTGAACCCTGCAC	NA	False	NA	NA	False	NA	NA	NA	27456346	27456966	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_27456300_27457000
WTC11_00083524	chr7	+	2515	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGATTGCCTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	32841931	32844446	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_32841900_32844400
WTC11_00083525	chr7	+	1677	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCATTCATTCTTAT	55366183	True	NA	NA	False	AATAAA	-22	NA	55366341	55368018	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_55366300_55368000
WTC11_00083526	chr7	+	3325	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATACCTATGTGACAAA	NA	False	NA	NA	False	NA	NA	NA	55453561	55456886	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_55453600_55456900
WTC11_00083527	chr7	+	420	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGCAGCTCCTCTG	NA	False	NA	NA	False	AAGAAA	-41	NA	88448297	88448717	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_88448300_88448700
WTC11_00083535	chr8	+	483	1	FSM	ENSG00000272812.1	ENST00000609090.1	574	1	130	-39	130	39	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATCTTTTTAAGGTTTA	233154	False	NA	NA	False	NA	NA	NA	233248	233731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_233200_233700
WTC11_00083536	chr8	+	10376	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	-20	0	-17	0	multi-exon	FALSE	canonical	3	33	junction_2	12.2877033786216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	406089	True	NA	5	True	ATTAAA	-16	NA	406937	477967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
WTC11_00083537	chr8	+	1970	4	FSM	ENSG00000182372.10	ENST00000520991.3	1305	4	-137	-528	-65	0	multi-exon	FALSE	canonical	2	10	junction_3	41.9867704031745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	NA	False	NA	NA	False	NA	NA	NA	1763694	1781300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763886_1770931_1771598_1772923_1772986_1780249
WTC11_00083538	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	1761448	True	NA	10	True	AATATA	-43	NA	1763788	1786570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763886_1770931_1771598_1780249
WTC11_00083539	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1761419	True	NA	NA	False	NA	NA	NA	1763759	1781300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763812_1770931_1771598_1780249
WTC11_00083540	chr8	+	6904	4	NNC	ENSG00000182372.10	novel	7084	3	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_3	53.8578375602536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	1761448	True	NA	10	True	AATATA	-43	NA	1763788	1786570	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1763886_1770931_1771598_1780249_1785372_1785551
WTC11_00083544	chr8	+	856	2	FSM	ENSG00000182372.10	ENST00000636605.1	1069	2	6	207	6	-207	multi-exon	FALSE	canonical	1	1	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTGGCTCAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	1800000	1801504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1800026_1800673
WTC11_00083545	chr8	+	5634	29	NIC	ENSG00000104728.16	novel	5648	29	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	50.3617905656619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGGATGAGTTGCCTCT	NA	False	NA	28	True	AATAAA	-20	NA	1823940	1958639	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00083546	chr8	+	5517	28	FSM	ENSG00000104728.16	ENST00000520359.5	5472	28	-47	2	15	0	multi-exon	FALSE	canonical	3	55	junction_4	44.9339707614969	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGGATGAGTTGCCTCT	NA	False	NA	28	True	AATAAA	-20	NA	1823940	1958639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00083547	chr8	+	5638	29	FSM	ENSG00000104728.16	ENST00000349830.8	5648	29	10	0	10	0	multi-exon	FALSE	canonical	3	26	junction_8	51.3241499427603	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	NA	False	NA	30	True	AATAAA	-22	NA	1823935	1958641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00083549	chr8	+	2173	12	FSM	ENSG00000104728.16	ENST00000520972.5	2176	12	3	0	3	0	multi-exon	FALSE	canonical	3	55	junction_1	30.109716726039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACATTTTTTGTCT	1859877	False	NA	NA	False	NA	NA	NA	1859896	1904110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280
WTC11_00083552	chr8	+	4343	19	FSM	ENSG00000104728.16	ENST00000522435.5	4343	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	48.7182628569869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGGATGAGTTGCCTCT	1882637	True	NA	28	True	AATAAA	-20	NA	1882655	1958639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00083553	chr8	+	6911	2	FSM	ENSG00000176595.4	ENST00000320248.4	6911	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGATGTGCCCCGAGTG	NA	False	NA	7	True	AATAAA	-21	NA	1973676	2006936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1973936_2000284
WTC11_00083555	chr8	+	885	1	FSM	ENSG00000254244.1	ENST00000517543.1	1253	1	456	-88	456	88	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAATTAGAGAACACAAA	NA	False	NA	NA	False	NA	NA	NA	4787787	4788672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_4787800_4788700
WTC11_00083556	chr8	+	3743	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	19	11	0	-11	multi-exon	FALSE	canonical	3	88	junction_1	19.9407284987591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTTCACTTTTACTT	6404353	True	NA	16	True	AATAAA	-20	NA	6406610	6447408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
WTC11_00083558	chr8	+	2065	7	FSM	ENSG00000147316.15	ENST00000522905.1	2049	7	-16	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	49.7574673346178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGTATACGATAGAGA	6404369	True	NA	NA	False	NA	NA	NA	6406626	6445890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6442066_6442157_6444392
WTC11_00083559	chr8	+	2549	7	FSM	ENSG00000155189.12	ENST00000523234.5	2525	7	-24	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	326.565673163743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATACCAGTTGGATC	6706906	True	NA	NA	False	AATATA	-14	NA	6708641	6758885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6708888_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
WTC11_00083560	chr8	+	5641	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	-404	0	-404	0	multi-exon	FALSE	canonical	3	825	junction_2	53.0575351935644	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	NA	False	NA	13	True	AATAAA	-22	NA	6708237	6761503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
WTC11_00083561	chr8	+	397	2	Antisense	novelGene_ENSG00000284614.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCCTAAATGGGTTCA	NA	False	NA	NA	False	GGGGCT	-32	NA	7220312	7227707	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_7220385_7227382
WTC11_00083562	chr8	+	697	2	Genic_Genomic	ENSG00000284617.1	novel	218	1	NA	NA	-270	347	multi-exon	FALSE	canonical	3	12	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCCAGGGCCGATC	NA	False	NA	NA	False	NA	NA	NA	7611202	7612037	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_7611691_7611828
WTC11_00083563	chr8	+	218	1	FSM	ENSG00000284617.1	ENST00000641758.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGCGGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	7611472	7611690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7611500_7611700
WTC11_00083564	chr8	+	643	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-145	-108506	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	8065477	False	NA	NA	False	AATAAA	-41	NA	8065500	8072021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8065817_8071694
WTC11_00083565	chr8	+	218	1	FSM	ENSG00000284661.1	ENST00000642093.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCCGG	8065575	False	NA	NA	False	NA	NA	NA	8065598	8065816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8065600_8065800
WTC11_00083566	chr8	+	1196	5	NIC	ENSG00000173295.9	novel	1858	9	NA	NA	2187	0	intron_retention	FALSE	canonical	1	2	junction_3	0.82915619758885	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCGTGTTGTCTGTTG	8230607	False	NA	14	True	ATTAAA	-17	NA	8230839	8244863	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_8230906_8232793_8232875_8235815_8235950_8237125_8237276_8244098
WTC11_00083569	chr8	+	423	2	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAAATGAAAATAAATGT	8390045	False	NA	NA	False	NA	NA	NA	8390057	8399291	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8390263_8399073
WTC11_00083570	chr8	+	2222	1	FSM	ENSG00000253958.2	ENST00000519106.2	2160	1	-42	-20	-42	20	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTGTCTTCAGTACA	8701194	True	NA	25	True	AATAAA	-35	NA	8701894	8704116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8701900_8704100
WTC11_00083571	chr8	+	4535	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	-14	0	-8	0	multi-exon	TRUE	canonical	3	125	junction_6	12.1209185570511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999648	True	NA	8	True	AATAAA	-14	NA	9002882	9033338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
WTC11_00083572	chr8	+	2068	8	FSM	ENSG00000104626.15	ENST00000519292.5	2107	8	39	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_7	53.5041482275068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999648	True	NA	8	True	AATAAA	-14	NA	9002882	9033338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791_9030082_9032548
WTC11_00083573	chr8	+	504	3	FSM	ENSG00000248538.9	ENST00000521718.3	550	3	37	9	-9	1	multi-exon	FALSE	canonical	3	16	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTAAGGAAATCATAA	NA	False	NA	NA	False	AATAAA	-18	NA	9151732	9156360	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9151917_9154965_9155077_9156151
WTC11_00083574	chr8	+	1285	2	ISM	ENSG00000248538.9	ENST00000521718.3	550	3	2305	9	-1008	1	3prime_fragment	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTAAGGAAATCATAA	9153984	False	NA	NA	False	AATAAA	-18	NA	9154000	9156360	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_9155077_9156151
WTC11_00083575	chr8	+	339	2	FSM	ENSG00000248538.9	ENST00000648549.1	349	2	0	10	0	-10	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAAAAGAAAATCTTAA	9154992	False	NA	NA	False	AATAAA	-7	NA	9155008	9156349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9155150_9156151
WTC11_00083576	chr8	+	253	1	NIC	ENSG00000248538.9	novel	1875	6	NA	NA	-223	78	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTTAAGTTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	9167961	9168214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9168000_9168200
WTC11_00083577	chr8	+	10453	28	NIC	ENSG00000173273.16	novel	9622	27	NA	NA	-763	13	combination_of_known_junctions	FALSE	canonical	3	16	junction_27	36.9717943877074	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTAGCTCTTAAGTAT	NA	False	NA	28	True	AATAAA	-29	NA	9555148	9782359	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9772368_9772424_9776649
WTC11_00083578	chr8	+	1966	11	FSM	ENSG00000173273.16	ENST00000520408.5	1964	11	-2	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	26.7740546051583	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATCCTTTAATGTC	9551610	True	NA	NA	False	AATAAA	-15	NA	9555911	9710409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141
WTC11_00083581	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.71293199325011	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	10053865	True	NA	12	True	AATAAA	-24	NA	10054291	10428891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
WTC11_00083582	chr8	+	306	1	FSM	ENSG00000231965.4	ENST00000488887.2	520	1	-64	278	-64	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACGTGCTTAAAAATGGT	NA	False	NA	NA	False	GGGGCT	-21	NA	11174986	11175292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11175000_11175300
WTC11_00083583	chr8	+	3514	11	FSM	ENSG00000104643.10	ENST00000530200.1	3503	11	-11	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	47.1677856168805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACAGCCTCACTTTTT	11283728	True	NA	76	True	NA	NA	NA	11284815	11324527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11285071_11295193_11295303_11297899_11297952_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
WTC11_00083584	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	15.8939385915077	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	11283728	True	NA	21	True	AATAAA	-33	NA	11284815	11328146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
WTC11_00083585	chr8	+	1911	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	49	0	49	0	multi-exon	FALSE	canonical	2	5	junction_1	36.9327049017267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	11285079	True	NA	-2	True	AATAGA	-11	NA	11285142	11323057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
WTC11_00083587	chr8	+	3340	7	FSM	ENSG00000136574.19	ENST00000532059.6	3419	7	75	4	55	-2	multi-exon	FALSE	canonical	1	1	junction_1	2.7938424357067	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCGTCCCTTAGTGG	11704221	False	NA	4	True	AATAAA	-17	NA	11704276	11759998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11707855_11708929_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
WTC11_00083588	chr8	+	3337	7	FSM	ENSG00000136574.19	ENST00000335135.8	3414	7	73	4	55	-2	multi-exon	FALSE	canonical	1	1	junction_1	2.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCGTCCCTTAGTGG	11704221	False	NA	4	True	AATAAA	-17	NA	11704276	11759998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
WTC11_00083589	chr8	+	2209	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	17	0	17	0	multi-exon	TRUE	canonical	3	98	junction_1	41.105808591974	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768189	True	NA	17	True	AATAAA	-17	NA	11769655	11787345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
WTC11_00083590	chr8	+	2751	5	NIC	ENSG00000154328.16	novel	2323	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	28	junction_2	71.4855754680621	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	11768191	True	NA	12	True	AATAAA	-12	NA	11769657	11787340	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_11770336_11771445_11771591_11779597_11779951_11783202_11783400_11785962
WTC11_00083592	chr8	+	2026	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	-10	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	91.1604202613295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768232	True	NA	17	True	AATAAA	-17	NA	11769698	11787345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
WTC11_00083595	chr8	+	491	1	FSM	ENSG00000227203.3	ENST00000524415.1	382	1	-64	-45	-64	45	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTCTTTTTACATTG	NA	False	NA	NA	False	NA	NA	NA	11789940	11790431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11789900_11790400
WTC11_00083596	chr8	+	1712	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	-70	393	28	0	multi-exon	FALSE	canonical	3	3358	junction_3	338.434812702505	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	11802648	False	NA	-42	True	NA	NA	NA	11802670	11838905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083597	chr8	+	1556	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	2	0	2	0	multi-exon	FALSE	canonical	3	191	junction_1	1729.16907429551	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	11802622	False	NA	43	True	TTTAAA	-29	NA	11802644	11839210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083598	chr8	+	2334	9	FSM	ENSG00000079459.13	ENST00000623368.3	2368	9	34	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	1690.16707753997	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	11802622	False	NA	17	True	AATAAA	-25	NA	11802644	11839304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083600	chr8	+	1393	7	FSM	ENSG00000079459.13	ENST00000443614.6	1393	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	1498.91976844067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTGCCTCATCCCA	11757492	True	NA	147	True	NA	NA	NA	11802738	11838783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083602	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	1313.43512848359	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	11757519	True	NA	-42	True	NA	NA	NA	11802765	11838905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083604	chr8	+	1890	7	FSM	ENSG00000079459.13	ENST00000525954.5	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	3358	junction_2	363.479213833321	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATGTTCGTAATAGT	11808400	False	NA	20	True	ATTAAA	-21	NA	11808416	11838967	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00083608	chr8	+	1178	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	141	42	141	-42	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTTATACTGATAAATC	12194261	False	NA	NA	False	AAGAAA	-16	NA	12194607	12196238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12195438_12195890
WTC11_00083609	chr8	+	1048	3	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	11	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTCCTCCCGGTGG	12437306	False	NA	NA	False	NA	NA	NA	12437318	12445063	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12444755
WTC11_00083610	chr8	+	385	1	FSM	ENSG00000270154.1	ENST00000602979.1	661	1	252	24	252	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAAACTTTTTGACCT	NA	False	NA	NA	False	NA	NA	NA	12476713	12477098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12476700_12477100
WTC11_00083611	chr8	+	1334	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	29	57	29	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGCGATCAAATGGCT	13566787	True	NA	NA	False	AAAAAG	-10	NA	13566897	13568231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_13566900_13568200
WTC11_00083612	chr8	+	492	1	FSM	ENSG00000214366.4	ENST00000528228.1	640	1	174	-26	174	26	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGACTGAGTTAAGCAA	NA	False	NA	NA	False	ACTAAA	-43	NA	14309206	14309698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_14309200_14309700
WTC11_00083613	chr8	+	1569	9	FSM	ENSG00000104723.21	ENST00000506802.5	1546	9	-23	0	-13	0	multi-exon	TRUE	canonical	3	8	junction_8	104.749403339589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAAATTAAACTTACT	NA	False	NA	-25	True	GATAAA	-25	NA	15540209	15764613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15764202
WTC11_00083614	chr8	+	3696	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	220	junction_9	43.0188015169021	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	NA	False	NA	105	True	NA	NA	NA	15540209	15766649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
WTC11_00083615	chr8	+	3697	11	FSM	ENSG00000104723.21	ENST00000503731.6	3697	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	109.528489444528	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTAGCATTTTGTGCT	15535962	True	NA	94	True	NA	NA	NA	15540262	15766638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15764202
WTC11_00083616	chr8	+	3991	15	FSM	ENSG00000155970.12	ENST00000318063.10	3990	15	-5	4	-5	-4	multi-exon	FALSE	canonical	3	10	junction_8	7.74464923910274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTACTTGGCTTT	17025418	True	NA	NA	False	AATAAA	-21	NA	17027232	17122638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17027661_17064083_17064238_17069687_17069720_17077782_17077862_17081692_17081741_17085235_17085319_17086963_17087036_17090545_17090585_17098457_17098554_17104390_17104492_17105412_17105585_17114092_17114202_17116442_17116601_17118706_17118776_17120287
WTC11_00083617	chr8	+	6563	14	NNC	ENSG00000104219.13	novel	5924	13	NA	NA	-497	167	at_least_one_novel_splicesite	FALSE	non_canonical	3	62	junction_13	45.1722541432094	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCAAGAACAAGTTTTTA	17155713	True	NA	NA	False	AATGAA	-29	NA	17155984	17224966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255_17222731_17222755
WTC11_00083618	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	22.1226065874305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	17154783	True	NA	10	True	AATGAA	-16	NA	17156481	17224799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
WTC11_00083619	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	30.6963265360844	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	17242617	True	NA	5	True	AATAAA	-22	NA	17246957	17298024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
WTC11_00083620	chr8	+	3152	14	NIC	ENSG00000155975.10	novel	4519	12	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	118.518318060865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCAGATTGTCTTGG	17242617	True	NA	NA	False	NA	NA	NA	17246957	17300007	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986_17296413_17298066_17298159_17299854
WTC11_00083621	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	99.6295638854251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	17242782	False	NA	NA	False	NA	NA	NA	17247122	17295052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
WTC11_00083623	chr8	+	7707	13	FSM	ENSG00000003989.18	ENST00000494857.6	7615	13	-92	0	-92	0	multi-exon	FALSE	canonical	3	21	junction_2	9.13897331943437	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATGCAGATGTTACC	17495656	True	NA	63	True	AATAAA	-17	NA	17496995	17570566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17497238_17502256_17502303_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
WTC11_00083624	chr8	+	7602	12	FSM	ENSG00000003989.18	ENST00000522656.5	2274	12	-36	-5292	-33	0	multi-exon	FALSE	canonical	3	20	junction_1	8.45698889422381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATGCAGATGTTACC	17495715	True	NA	63	True	AATAAA	-17	NA	17497054	17570566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17497238_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
WTC11_00083625	chr8	+	1519	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	-16	5	-16	-5	multi-exon	FALSE	canonical	3	23	junction_1	7.63151361133557	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGTTGACTTAAAATAC	17576581	True	NA	NA	False	AATAAA	-23	NA	17577199	17643139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
WTC11_00083626	chr8	+	6849	40	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	-321	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_24	87.903845920117	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTAGTTTGA	NA	False	NA	4	True	AATAAA	-15	NA	17922646	18027747	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17983232_17983290_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083627	chr8	+	6820	39	FSM	ENSG00000078674.19	ENST00000325083.13	8652	39	-148	1980	-128	-7	multi-exon	FALSE	canonical	3	107	junction_6	78.0897496651775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	17921897	False	NA	NA	False	AATAAA	-16	NA	17922839	18027968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083632	chr8	+	6412	39	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	85.8877907730669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17914778	True	NA	15	True	AATAAA	-26	NA	17922989	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083633	chr8	+	6443	39	FSM	ENSG00000078674.19	ENST00000519253.5	6443	39	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_28	80.6126343348512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGTTTAAAACATCAGA	17914816	False	NA	60	True	NA	NA	NA	17923027	18027803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083635	chr8	+	4750	24	NNC	ENSG00000078674.19	novel	8652	39	NA	NA	28	3194	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_23	61.0187922337953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGATGTTTTCTT	17937144	False	NA	6	True	AATAAA	-23	NA	17937203	17989457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17988951
WTC11_00083637	chr8	+	6250	26	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_11	85.8064426485564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAATTGTATTTTCTTT	17957607	False	NA	19	True	AATAAA	-19	NA	17957657	18029948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083641	chr8	+	3242	5	FSM	ENSG00000078674.19	ENST00000519802.5	796	5	-249	-2197	-249	7	multi-exon	FALSE	canonical	3	338	junction_3	48.0234317807464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTTCTTTTAAATTC	18013554	False	NA	26	True	AATAAA	-26	NA	18013578	18029955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00083642	chr8	+	1815	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209700	True	NA	NA	False	AATAAA	-31	NA	18210092	18223689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18210181_18219410_18219490_18222041
WTC11_00083643	chr8	+	2150	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	-10	22	-10	-21	multi-exon	FALSE	canonical	1	6	junction_1	9.20144916122817	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATCTTGCTTGCCCCCC	18209727	True	NA	NA	False	AATAAA	-9	NA	18210119	18223667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
WTC11_00083644	chr8	+	3176	10	FSM	ENSG00000104611.12	ENST00000265807.8	3276	10	100	0	97	0	multi-exon	FALSE	canonical	2	4	junction_1	17.4928556845359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTACAAGCTTGTTG	19313758	False	NA	9	True	AATAAA	-18	NA	19313792	19396218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19313824_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
WTC11_00083645	chr8	+	3188	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	61	-1265	61	0	multi-exon	FALSE	canonical	3	20	junction_5	12.6227308191743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTACAAGCTTGTTG	19312917	True	NA	9	True	AATAAA	-18	NA	19314036	19396218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
WTC11_00083646	chr8	+	3245	9	NIC	ENSG00000104611.12	novel	1984	10	NA	NA	1	78	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	10.4455433080333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTCTAATGAGAAAGAT	19312857	True	NA	87	True	TATAAA	-31	NA	19313976	19396296	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
WTC11_00083647	chr8	+	567	4	FSM	ENSG00000104611.12	ENST00000523736.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCAGGCATCTCGTGA	19318470	False	NA	NA	False	NA	NA	NA	19319589	19361298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19319729_19332954_19333115_19334685_19334858_19361202
WTC11_00083649	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_15	26.5717630907322	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	19813911	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
WTC11_00083652	chr8	+	2568	18	NIC	ENSG00000104613.12	novel	2517	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	92.1578681630595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTTTTTAAAAATTT	19813932	True	NA	12	True	AATAAA	-14	NA	19817436	19852061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19849161_19849240_19851648
WTC11_00083657	chr8	+	3572	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	16	junction_3	4.76095228569523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	19938169	True	NA	11	True	AATAAA	-24	NA	19939245	19967259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
WTC11_00083659	chr8	+	2866	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	-17	7	-17	0	multi-exon	FALSE	canonical	3	1022	junction_8	81.6657931765065	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAACTAAAGTGACTCT	20188290	True	NA	13	True	AATAAA	-16	NA	20197363	20221689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
WTC11_00083660	chr8	+	6907	11	FSM	ENSG00000147416.11	ENST00000523482.5	6907	11	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_8	81.6859841098827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAACTAAAGTGACTCT	20188329	True	NA	13	True	AATAAA	-16	NA	20197402	20221689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20217325_20218152_20218283_20220262
WTC11_00083661	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_3	62.7292595205778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	20188365	True	NA	NA	False	AATAAA	-17	NA	20197438	20211415	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
WTC11_00083662	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	2	207	junction_16	40.9054917982813	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916935	True	NA	24	True	AATAAA	-20	NA	21919661	22006585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
WTC11_00083664	chr8	+	698	6	FSM	ENSG00000130227.17	ENST00000521303.5	569	6	-129	0	-34	0	multi-exon	FALSE	canonical	3	27	junction_5	116.387971887133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTTCTTTTCGCGA	21919612	False	NA	NA	False	NA	NA	NA	21919627	21974705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971969_21974669
WTC11_00083667	chr8	+	1206	2	ISM	ENSG00000158856.19	ENST00000415253.5	2394	15	21762	47	14594	-35	3prime_fragment	FALSE	canonical	3	19	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGGGAGGGGGACT	NA	False	NA	-47	True	NA	NA	NA	22081109	22082471	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22081194_22081349
WTC11_00083668	chr8	+	944	7	FSM	ENSG00000158863.22	ENST00000427751.5	932	7	-12	0	-12	0	multi-exon	FALSE	canonical	1	1	junction_1	44.4362839730477	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGCAGCAGAGATGGA	22087789	True	NA	NA	False	NA	NA	NA	22089171	22098310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22089760_22089855_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067
WTC11_00083669	chr8	+	4194	17	FSM	ENSG00000158863.22	ENST00000289921.8	4316	17	22	100	-12	-100	multi-exon	TRUE	canonical	3	48	junction_1	18.2820779727032	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGTAAGACCCTGTCT	22087789	True	NA	NA	False	NA	NA	NA	22089171	22104811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792
WTC11_00083677	chr8	+	3970	20	FSM	ENSG00000168487.20	ENST00000306385.10	3593	20	-379	2	-147	0	multi-exon	TRUE	canonical	3	19	junction_16	7.9143615733408	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGTGCCAGATGCT	22164978	False	NA	7	True	AATAAA	-18	NA	22164992	22212324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
WTC11_00083680	chr8	+	1337	2	FSM	ENSG00000168487.20	ENST00000522332.1	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGTCCATGTGTCT	NA	False	NA	2	True	AGTAAA	-36	NA	22198415	22201482	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22199388_22201117
WTC11_00083681	chr8	+	5336	9	FSM	ENSG00000168495.13	ENST00000306433.9	5336	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	71.9804661001858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCCTGCGTGGTCCGA	22243683	True	NA	10	True	ATTAAA	-22	NA	22245132	22254601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22245184_22245444_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
WTC11_00083682	chr8	+	6019	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	80	-605	80	604	multi-exon	FALSE	canonical	3	262	junction_4	14.030578849682	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTCGAGACCAGCC	22243865	False	NA	NA	False	NA	NA	NA	22245314	22255205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
WTC11_00083683	chr8	+	5129	23	FSM	ENSG00000197181.12	ENST00000356766.11	5114	23	-20	5	-20	-5	multi-exon	FALSE	canonical	3	12	junction_22	9.45104830426693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTGTAGTTGTGTTT	22274755	True	NA	NA	False	AATAAA	-12	NA	22275295	22357563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22354270_22354379_22355348
WTC11_00083685	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1384	junction_5	118.754934108019	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	22351865	True	NA	20	True	AATAAA	-26	NA	22367277	22422736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
WTC11_00083690	chr8	+	2205	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	-11	0	-11	0	multi-exon	FALSE	canonical	2	10	junction_12	8.70013262498381	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	22440691	True	NA	8	True	AATAAA	-21	NA	22441066	22541125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
WTC11_00083691	chr8	+	4179	13	FSM	ENSG00000120910.15	ENST00000289963.12	2135	13	0	-2044	0	2044	multi-exon	FALSE	canonical	3	11	junction_12	7.8328900583799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAAAGTTCTGCAGTT	22440748	True	NA	NA	False	ATTAAA	-15	NA	22441123	22543186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22540614
WTC11_00083692	chr8	+	1997	11	ISM	ENSG00000120896.14	ENST00000240123.12	3227	21	13308	296	-31	-3	3prime_fragment	FALSE	canonical	3	74	junction_1	164.235227646203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTTGTCTCTGCGGCCT	22565224	False	NA	6	True	AATAAA	-13	NA	22565234	22575492	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22565355_22565825_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
WTC11_00083695	chr8	+	2026	10	FSM	ENSG00000120896.14	ENST00000523965.5	2028	10	0	2	0	-2	multi-exon	FALSE	canonical	3	485	junction_1	52.2822350207547	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGTCTCTGCGGCCTT	22560481	True	NA	7	True	AATAAA	-14	NA	22565677	22575493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
WTC11_00083696	chr8	+	1826	8	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	12	-3	intron_retention	FALSE	canonical	1	5	junction_2	265.89563703814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTTGTCTCTGCGGCCT	22560493	True	NA	6	True	AATAAA	-13	NA	22565689	22575492	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22565873_22566660_22566714_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
WTC11_00083703	chr8	+	1887	10	FSM	ENSG00000120913.24	ENST00000397760.8	1847	10	-40	0	-40	0	multi-exon	TRUE	canonical	3	22	junction_1	155.992481616864	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22578703	True	NA	15	True	AATAAA	-1	NA	22579089	22594298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22579528_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
WTC11_00083704	chr8	+	1331	8	FSM	ENSG00000120913.24	ENST00000409141.5	1463	8	132	0	3	0	multi-exon	FALSE	canonical	3	29	junction_3	144.429772497479	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22580216	False	NA	15	True	AATAAA	-1	NA	22580602	22594298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22593732
WTC11_00083705	chr8	+	2390	4	FSM	ENSG00000120913.24	ENST00000464275.5	1995	4	-387	-8	83	0	multi-exon	FALSE	canonical	3	286	junction_3	73.9203775844132	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22587775	False	NA	15	True	AATAAA	-1	NA	22587814	22594298	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
WTC11_00083709	chr8	+	2027	7	FSM	ENSG00000241852.11	ENST00000409586.7	2021	7	-6	0	-4	0	multi-exon	FALSE	canonical	3	49	junction_5	34.5225369223578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22598437	True	NA	9	True	ATTAAA	-6	NA	22599594	22604133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
WTC11_00083710	chr8	+	2568	7	FSM	ENSG00000241852.11	ENST00000289989.10	2056	7	-521	9	-521	0	multi-exon	FALSE	canonical	3	51	junction_5	33.9873342421686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22598982	False	NA	9	True	ATTAAA	-6	NA	22599077	22604133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
WTC11_00083711	chr8	+	2476	6	FSM	ENSG00000241852.11	ENST00000614574.4	1955	6	-521	0	-519	0	multi-exon	FALSE	canonical	3	46	junction_5	38.2382007944935	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGTGAATAGGAAAGG	22598984	False	NA	26	True	ATTAAA	-23	NA	22599079	22604150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22603194
WTC11_00083713	chr8	+	1850	6	ISM	ENSG00000241852.11	ENST00000289989.10	2056	7	1332	-5	-865	-3	3prime_fragment	FALSE	canonical	3	51	junction_4	35.6123574058219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCAGGTGAATAGGAA	22599773	False	NA	23	True	ATTAAA	-20	NA	22600930	22604147	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
WTC11_00083716	chr8	+	4864	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-136	-1043	-136	550	multi-exon	FALSE	canonical	3	780	junction_7	69.7530465284492	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	22603463	False	NA	NA	False	NA	NA	NA	22604620	22621514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
WTC11_00083717	chr8	+	549	6	FSM	ENSG00000158941.17	ENST00000523801.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	367.679751958141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGAACAGATTTCCTG	22595548	True	NA	NA	False	NA	NA	NA	22604762	22608008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22604843_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968
WTC11_00083718	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	193.186406095253	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	22604976	False	NA	62	True	AATAAA	-18	NA	22605037	22620471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
WTC11_00083724	chr8	+	5494	10	FSM	ENSG00000008853.18	ENST00000251822.7	5482	10	-12	0	-12	0	multi-exon	FALSE	canonical	3	17	junction_6	8.40340906719513	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCCTTGTTTGTATT	22999178	True	NA	29	True	CATAAA	-23	NA	22999535	23020199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23000106_23004424_23004627_23005371_23005476_23005959_23006146_23006727_23007747_23007992_23008112_23010537_23010689_23014689_23014779_23015637_23015744_23017251
WTC11_00083727	chr8	+	5960	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	-4565	0	4565	multi-exon	FALSE	canonical	3	144	junction_4	11.9242400177118	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGACTCAGAGGTCTGC	23102650	True	NA	3	True	ATTAAA	-19	NA	23102920	23122010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
WTC11_00083728	chr8	+	376	2	FSM	ENSG00000246582.3	ENST00000517774.1	499	2	123	0	123	0	multi-exon	FALSE	canonical	3	13	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGGATTTTCCTAACC	23224498	True	NA	NA	False	NA	NA	NA	23224593	23225882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23224892_23225804
WTC11_00083729	chr8	+	1981	3	FSM	ENSG00000246582.3	ENST00000500853.1	1970	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	17	junction_2	30	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	23225002	True	NA	21	True	AATAAA	-34	NA	23225209	23230926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23226124_23228065_23228154_23229947
WTC11_00083730	chr8	+	1239	2	FSM	ENSG00000246582.3	ENST00000670072.1	1239	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTATTTCTTCTTTCAAT	23225271	False	NA	18	True	AATAAA	-30	NA	23225478	23228659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23226124_23228065
WTC11_00083731	chr8	+	3749	13	Fusion	ENSG00000147457.14_ENSG00000246582.3	novel	3367	10	NA	NA	0	0	multi-exon	FALSE	canonical	3	28	junction_3	120.722132740162	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	23225271	False	NA	4	True	ATTAAA	-11	NA	23225478	23261992	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_23225626_23225804_23226124_23228065_23228154_23246255_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
WTC11_00083732	chr8	+	3213	10	FSM	ENSG00000147457.14	ENST00000313219.8	3367	10	154	0	154	0	multi-exon	FALSE	canonical	3	276	junction_1	22.7796747177591	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTCCTCTTTAGGT	NA	False	NA	11	True	ATTAAA	-18	NA	23246244	23261999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
WTC11_00083735	chr8	+	1594	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	204	junction_1	25.6316131337209	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	23286119	True	NA	21	True	AATAAA	-23	NA	23288086	23296279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
WTC11_00083736	chr8	+	911	3	FSM	ENSG00000104679.12	ENST00000521588.4	953	3	42	0	42	0	multi-exon	FALSE	canonical	3	276	junction_2	4.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATGAGGCTCTTGAGCC	23286496	False	NA	NA	False	NA	NA	NA	23288463	23290468	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23288634_23289015_23289154_23289865
WTC11_00083737	chr8	+	1513	2	FSM	ENSG00000287166.1	ENST00000668387.1	1525	2	2	10	2	-10	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATAAATATCTTTCTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	23492171	23494887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23492366_23493568
WTC11_00083738	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	106.686456497533	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526343	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
WTC11_00083739	chr8	+	3415	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	-11	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	88.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526343	True	NA	NA	False	AGTAAA	-16	NA	23528955	23572221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107_23568379_23571334
WTC11_00083740	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	104.964544278321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23526343	True	NA	16	True	AATAAA	-16	NA	23528955	23575463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
WTC11_00083742	chr8	+	7573	2	NNC	ENSG00000147454.14	novel	4672	4	NA	NA	1083	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23567845	False	NA	16	True	AATAAA	-16	NA	23567858	23575463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_23572204_23572235
WTC11_00083743	chr8	+	263	3	FSM	ENSG00000042980.13	ENST00000523440.1	522	3	128	131	128	-131	multi-exon	FALSE	canonical	2	3	junction_2	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAACGGAGTCTCTTCAA	24299882	False	NA	NA	False	NA	NA	NA	24299970	24310241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24300078_24309893_24309971_24310162
WTC11_00083744	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24911334	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24914874_24915604_24915730_24917060
WTC11_00083745	chr8	+	958	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	-470	2	-470	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAGTATGTATGGAGAA	24956098	True	NA	6	True	AATAAA	-17	NA	24956150	24957108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24956200_24957100
WTC11_00083746	chr8	+	10246	52	FSM	ENSG00000147459.18	ENST00000276440.12	10246	52	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	3.11413046213205	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGTGTGTTTAGTTT	25183886	True	NA	18	True	ATTAAA	-20	NA	25184688	25415711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25184952_25243673_25243758_25268844_25268886_25275385_25275442_25278568_25278666_25292023_25292173_25296512_25296649_25298943_25299102_25300575_25300658_25302324_25302455_25304254_25304328_25308782_25308926_25310406_25310533_25317006_25317132_25319577_25319677_25320979_25321053_25323847_25323952_25325363_25325548_25332250_25332349_25332602_25332693_25334095_25334197_25336238_25336374_25340876_25340989_25341738_25341810_25342400_25342508_25345474_25345612_25351730_25351827_25358962_25359062_25363046_25363142_25364625_25364705_25366869_25366971_25368191_25368251_25368570_25368726_25369555_25369642_25372558_25372719_25373617_25373659_25374563_25374655_25377304_25377425_25380304_25380395_25382673_25382779_25389090_25389233_25390205_25390288_25391895_25391981_25392795_25392883_25395542_25395720_25399910_25399995_25400928_25401067_25403557_25403725_25407982_25408155_25408801_25408941_25410098_25410203_25411193
WTC11_00083747	chr8	+	704	4	FSM	ENSG00000147459.18	ENST00000410074.5	786	4	0	82	0	-82	multi-exon	FALSE	canonical	2	4	junction_3	3.68178700572909	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATCTAAATGATAAATT	25183920	True	NA	NA	False	NA	NA	NA	25184722	25271139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25184952_25243673_25243758_25268844_25268886_25270789
WTC11_00083749	chr8	+	7250	14	FSM	ENSG00000184661.14_ENSG00000289357.1	ENST00000380665.3	3565	14	-256	-3429	-256	1567	multi-exon	TRUE	canonical	3	222	junction_12	25.0523711806916	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACATATGGATCATTT	25458886	False	NA	-2	True	AATAAA	-12	NA	25458942	25511302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
WTC11_00083750	chr8	+	3448	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	38	0	0	multi-exon	FALSE	canonical	3	222	junction_13	24.2374520449789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	25448857	True	NA	-14	True	AATAAA	-23	NA	25459232	25507873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
WTC11_00083751	chr8	+	922	7	FSM	ENSG00000184661.14	ENST00000523454.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	130.045718456583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGTAACTTGTTTATCT	25468251	True	NA	NA	False	AATAAA	-24	NA	25468270	25485835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25468414_25469895_25469981_25472112_25472185_25479912_25480125_25483398_25483487_25483965_25484211_25485758
WTC11_00083752	chr8	+	2896	1	FSM	ENSG00000289357.1	ENST00000688186.1	957	1	28	-1967	28	1967	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATTGAGTTAAAAGAAT	25508793	True	NA	-49	True	NA	NA	NA	25508806	25511702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25508800_25511700
WTC11_00083753	chr8	+	3936	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	290	junction_7	27.2600644003478	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	NA	False	NA	14	True	AATAAA	-19	NA	26291494	26372680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
WTC11_00083754	chr8	+	2353	10	NNC	ENSG00000221914.11	novel	3923	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	95.1653531724884	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTGGTTTTCTTTTTC	26288381	True	NA	22	True	AATAAA	-16	NA	26291523	26371129	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_26291827_26293665_26293741_26338892_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
WTC11_00083755	chr8	+	568	6	FSM	ENSG00000221914.11	ENST00000522535.5	653	6	85	0	-62	0	multi-exon	FALSE	canonical	3	6	junction_1	128.677270720201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGAGGCCAGTCCACGA	26291864	False	NA	NA	False	NA	NA	NA	26291919	26361001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26292008_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973
WTC11_00083756	chr8	+	480	5	FSM	ENSG00000221914.11	ENST00000521484.5	556	5	76	0	76	0	multi-exon	FALSE	canonical	3	5	junction_2	149.141711134075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGAAGGTATAGAGATC	26293625	True	NA	NA	False	NA	NA	NA	26293665	26360238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26293741_26338889_26338988_26339902_26339974_26354467_26354634_26360168
WTC11_00083757	chr8	+	1163	7	FSM	ENSG00000221914.11	ENST00000518215.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_4	27.4312271366452	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTAGCTACTACAAACAAT	NA	False	NA	NA	False	AAGAAA	-41	NA	26354418	26370363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
WTC11_00083758	chr8	+	2357	4	FSM	ENSG00000221914.11	ENST00000517754.1	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	12.3917535302941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTGGTTTTCTTTTTC	26361056	True	NA	22	True	AATAAA	-16	NA	26361089	26371129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26361152_26362683_26363891_26366314_26366407_26370133
WTC11_00083760	chr8	+	3474	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	948	junction_4	59.2128364461626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	26377818	True	NA	12	True	ATTAAA	-16	NA	26383031	26413127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
WTC11_00083761	chr8	+	3109	4	FSM	ENSG00000104765.16	ENST00000521254.1	502	4	2	-2609	2	1	multi-exon	FALSE	canonical	3	15	junction_1	443.881615849191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCAGTATATCATTTT	26395304	True	NA	13	True	ATTAAA	-17	NA	26395618	26413128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26395709_26407999_26408104_26408226_26408377_26410363
WTC11_00083762	chr8	+	4813	14	FSM	ENSG00000092964.18	ENST00000521913.7	4798	14	-16	1	-16	-1	multi-exon	TRUE	canonical	3	11	junction_1	231.474026301162	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGTGTCTGTATTGAG	26513857	True	NA	17	True	AATAAA	-19	NA	26514014	26658174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26514680_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
WTC11_00083763	chr8	+	4599	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	4	0	-1	multi-exon	FALSE	canonical	3	723	junction_5	58.2917575141018	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGTGTCTGTATTGAG	26577779	False	NA	17	True	AATAAA	-19	NA	26577842	26658174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
WTC11_00083766	chr8	+	1403	14	FSM	ENSG00000120915.14	ENST00000520623.5	1923	14	-23	543	-23	-543	multi-exon	FALSE	canonical	3	75	junction_13	6.77534688733994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATATCTGGAACCAGCT	27489410	True	NA	NA	False	CATAAA	-34	NA	27491101	27538712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658
WTC11_00083767	chr8	+	2626	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	-18	168	0	-168	multi-exon	FALSE	canonical	3	75	junction_13	7.6955975870768	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTGGTCTCTCCCCT	27489433	True	NA	NA	False	NA	NA	NA	27491124	27545396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
WTC11_00083768	chr8	+	2046	18	FSM	ENSG00000120915.14	ENST00000521780.5	2038	18	-8	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	21.0711432908795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGCTGTCTTTGTTCT	27489451	True	NA	8	True	AATAAA	-16	NA	27491142	27544919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27491310_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
WTC11_00083769	chr8	+	850	6	NNC	ENSG00000120915.14	novel	1923	14	NA	NA	0	-725	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	35.4344465174779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGATTTTTGCTTC	27489518	True	NA	NA	False	ATTAAA	-20	NA	27491209	27511375	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511184
WTC11_00083770	chr8	+	475	3	FSM	ENSG00000120915.14	ENST00000521924.1	488	3	0	13	0	-13	multi-exon	FALSE	canonical	3	94	junction_2	0.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTGTCTCAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27505046	27512087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27505147_27506871_27506995_27511835
WTC11_00083772	chr8	+	3969	6	FSM	ENSG00000168077.14	ENST00000301904.4	3787	6	-182	0	-148	0	multi-exon	FALSE	canonical	3	72	junction_5	12.6743836142039	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	27633694	False	NA	17	True	AGTAAA	-16	NA	27633719	27673018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27670899
WTC11_00083773	chr8	+	1910	6	FSM	ENSG00000168077.14	ENST00000337221.8	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	34.1818665376834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTTTATTTTACTA	27633193	True	NA	14	True	AATAAA	-27	NA	27633867	27676776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27676568
WTC11_00083774	chr8	+	5914	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	-2160	0	-752	multi-exon	FALSE	canonical	3	183	junction_4	17.8044938147649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTTTAATGTTATT	27770245	True	NA	9	True	AATAAA	-24	NA	27774553	27807476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
WTC11_00083775	chr8	+	5582	12	NNC	ENSG00000171320.15	novel	3754	11	NA	NA	0	-754	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_11	61.6059190029525	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCTTTTTAATGTTA	27770245	True	NA	7	True	AATAAA	-22	NA	27774553	27807474	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305_27804994_27805323
WTC11_00083777	chr8	+	528	6	FSM	ENSG00000171320.15	ENST00000518262.5	528	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	84.8042451767599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTGGCAATGTTCAGAT	27780179	False	NA	NA	False	NA	NA	NA	27780198	27799601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27799540
WTC11_00083778	chr8	+	720	7	FSM	ENSG00000171320.15	ENST00000397418.4	720	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	84.3716974662317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCATCTTCAACATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	27787927	27808228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305_27803374_27808193
WTC11_00083780	chr8	+	3175	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	-30	3	-3	0	multi-exon	TRUE	canonical	3	129	junction_1	28.6624443180569	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGAGTCATGTGGTTT	28090125	True	NA	4	True	AATAAA	-16	NA	28093108	28191150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
WTC11_00083781	chr8	+	3011	13	FSM	ENSG00000134014.17	ENST00000537665.2	3053	13	42	0	-3	0	multi-exon	FALSE	canonical	2	10	junction_3	69.2597265531869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGAGTCATGTGGTTT	28090125	True	NA	4	True	AATAAA	-16	NA	28093108	28191150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
WTC11_00083782	chr8	+	2376	6	NNC	ENSG00000104290.11	novel	13770	8	NA	NA	-9	28035	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	62.1018518242411	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTTCTCATAAATACG	28489853	True	NA	NA	False	NA	NA	NA	28494195	28531154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28530720
WTC11_00083783	chr8	+	13839	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	-69	0	-62	0	multi-exon	TRUE	canonical	3	65	junction_6	42.5186633690886	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	28494132	False	NA	12	True	AATAAA	-15	NA	28494142	28574258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
WTC11_00083784	chr8	+	13793	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	-62	9	-62	0	multi-exon	FALSE	canonical	3	65	junction_5	48.0326856306088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	28494132	False	NA	12	True	AATAAA	-15	NA	28494142	28574258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
WTC11_00083786	chr8	+	9187	7	FSM	ENSG00000012232.9	ENST00000220562.9	8221	7	-8	-958	-8	958	multi-exon	TRUE	canonical	3	135	junction_1	69.9724151997692	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGCAAGTCTTTCT	28696644	True	NA	NA	False	AATAAA	-13	NA	28701492	28756557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28701660_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
WTC11_00083789	chr8	+	5267	2	FSM	ENSG00000012232.9	ENST00000523271.1	8257	2	2934	56	-1141	-56	multi-exon	FALSE	canonical	3	319	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACCAGCCTGGCCAA	28742815	False	NA	NA	False	NA	NA	NA	28742834	28755543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28743215_28750656
WTC11_00083791	chr8	+	1350	10	FSM	ENSG00000147421.18	ENST00000558662.5	1765	10	218	197	-12	40	multi-exon	FALSE	canonical	1	3	junction_8	3.29234053111757	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTTACACCATTCACGA	28889961	True	NA	NA	False	NA	NA	NA	28890612	29049394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289
WTC11_00083792	chr8	+	1169	1	FSM	ENSG00000259366.2	ENST00000687917.1	1471	1	0	302	0	-302	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGCACTTGAGAAGTCTT	29055914	False	NA	NA	False	NA	NA	NA	29055924	29057093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_29055900_29057100
WTC11_00083793	chr8	+	1338	1	FSM	ENSG00000254013.1	ENST00000519737.1	1188	1	-255	105	-255	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCAAGAGATCTGATGC	NA	False	NA	NA	False	NA	NA	NA	30027457	30028795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30027500_30028800
WTC11_00083794	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	41.515726605174	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	30088580	True	NA	NA	False	NA	NA	NA	30095407	30108524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
WTC11_00083795	chr8	+	1360	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	29	0	-29	multi-exon	FALSE	canonical	3	22	junction_3	319.806538742131	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAACAATCTTGCAACAC	30088652	True	NA	98	True	NA	NA	NA	30095479	30138319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
WTC11_00083796	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	26.1241693116207	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	30153574	True	NA	7	True	ATTAAA	-19	NA	30156368	30183639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
WTC11_00083797	chr8	+	5791	1	FSM	ENSG00000272375.1	ENST00000606555.1	645	1	-5072	-74	-5072	74	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCTGATCTCATTTAG	NA	False	NA	NA	False	NA	NA	NA	30192331	30198122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30192300_30198100
WTC11_00083798	chr8	+	1596	1	FSM	ENSG00000127589.4	ENST00000518096.1	1646	1	69	-19	-66	19	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGAGGTGTCAGGATC	NA	False	NA	102	True	AATAAA	-30	NA	30351941	30353537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30351900_30353500
WTC11_00083799	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_6	339.027366971393	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30384297	False	NA	NA	False	AATAAA	-28	NA	30384510	30547522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
WTC11_00083800	chr8	+	2990	10	FSM	ENSG00000157110.16	ENST00000287771.9	2974	10	-16	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	666.08320764464	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30384297	False	NA	25	True	AATAAA	-20	NA	30384510	30572256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30549499_30549586_30558886_30558957_30566256_30566361_30570636
WTC11_00083801	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_8	396.069122755107	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30374733	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
WTC11_00083802	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	642.914889822561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	30385184	False	NA	NA	False	NA	NA	NA	30385202	30547483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
WTC11_00083806	chr8	+	1005	3	FSM	ENSG00000157110.16	ENST00000519657.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_2	62	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAAGAAATAGCGTATTA	30558166	False	NA	31	True	AATAAA	-28	NA	30558180	30570761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30558957_30566256_30566361_30570636
WTC11_00083807	chr8	+	2669	2	FSM	ENSG00000157110.16	ENST00000520916.1	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTGCATGTTTGAG	30564028	False	NA	20	True	ATTAAA	-22	NA	30564049	30570994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30566361_30570636
WTC11_00083808	chr8	+	1472	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	35	junction_1	4.67297920965604	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743149	True	NA	27	True	AATAAA	-38	NA	30744142	30767006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
WTC11_00083809	chr8	+	1217	7	FSM	ENSG00000104691.16	ENST00000341403.9	1202	7	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1986841535707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGCCTTGTATT	30743180	True	NA	-74	True	NA	NA	NA	30744173	30766905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30756764_30756888_30760887_30760930_30763272_30763348_30766226
WTC11_00083810	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.5269949300181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743180	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
WTC11_00083811	chr8	+	7595	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	-20	0	2	0	multi-exon	FALSE	canonical	3	86	junction_4	16.4021688159985	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	31027292	True	NA	NA	False	ATTAAA	-27	NA	31033789	31176138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
WTC11_00083812	chr8	+	627	4	FSM	ENSG00000165392.11	ENST00000651642.1	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	12.0277457017791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGAGATGCTTAAGGT	31068293	False	NA	NA	False	AATGAA	-40	NA	31068308	31085228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_31068328_31076172_31076288_31080866_31081297_31085165
WTC11_00083813	chr8	+	3461	23	FSM	ENSG00000165392.11	ENST00000521620.5	3593	23	132	0	132	0	multi-exon	FALSE	canonical	1	1	junction_2	30.3034583303104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTTTTTAGCTTTCA	NA	False	NA	85	True	AATAAA	-28	NA	31087775	31173763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_31087921_31088889_31088966_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
WTC11_00083814	chr8	+	629	3	FSM	ENSG00000165392.11	ENST00000520169.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTGAAAAATGCTGTGA	NA	False	NA	NA	False	AAAAAG	-18	NA	31119955	31124965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_31120425_31124521_31124624_31124907
WTC11_00083815	chr8	+	1726	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	-23	0	2	0	multi-exon	TRUE	canonical	2	8	junction_4	2.7938424357067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	32548033	True	NA	36	True	AATAAA	-42	NA	32548211	32743253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
WTC11_00083816	chr8	+	886	6	FSM	ENSG00000157168.20	ENST00000518206.5	886	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	3.31058907144937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGATGTTTTTCTTCA	NA	False	NA	7	True	AATAAA	-13	NA	32605647	32743224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742007_32742076_32742674
WTC11_00083817	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	32922357	True	NA	19	True	AATAAA	-45	NA	32927943	33044850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_33044366
WTC11_00083818	chr8	+	6104	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	51	-4758	-4	4758	multi-exon	FALSE	canonical	3	248	junction_1	38.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAGTCTCTGGCAGAG	32922377	True	NA	7	True	AATAAA	-18	NA	32927963	33050203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_33041634_33041772_33044366
WTC11_00083819	chr8	+	1454	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	23	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	16.3571255285137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922357	True	NA	23	True	AGTAAA	-1	NA	32927943	33045445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
WTC11_00083822	chr8	+	6205	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	24	-5346	0	4756	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCAAGTCTCTGGCAG	32922390	True	NA	5	True	AATAAA	-16	NA	32927976	33050201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
WTC11_00083824	chr8	+	4032	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	-471	0	-471	0	multi-exon	FALSE	canonical	3	243	junction_1	27.4307208152546	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	33484683	False	NA	27	True	AATAAA	-18	NA	33484710	33501262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
WTC11_00083826	chr8	+	3995	9	FSM	ENSG00000198042.11	ENST00000518389.1	872	9	-492	-2631	-474	15	multi-exon	FALSE	canonical	3	5	junction_5	106.510489506903	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTTTCATCTCTATC	33484680	False	NA	42	True	AATAAA	-33	NA	33484707	33501277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33495541_33495617_33496624_33496742_33497231_33497298_33498431
WTC11_00083828	chr8	+	535	1	FSM	ENSG00000243181.2	ENST00000477341.2	475	1	-20	-40	-20	40	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAAAATAAATAAATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34874138	34874673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_34874100_34874700
WTC11_00083829	chr8	+	8662	16	FSM	ENSG00000156687.11	ENST00000287272.6	8662	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATGAGTGGCACTTTGA	35233526	False	NA	20	True	AATAAA	-27	NA	35235764	35796550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35686544_35686710_35705928_35705962_35722209_35722357_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
WTC11_00083830	chr8	+	2228	2	FSM	ENSG00000183779.7	ENST00000331569.6	3316	2	9	1079	9	-1079	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGATCCCCGCCCCTGTT	37695377	True	NA	NA	False	AAAAAG	-43	NA	37695790	37698940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37696223_37697144
WTC11_00083832	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	11.6107673026106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	37731475	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
WTC11_00083833	chr8	+	693	5	NIC	ENSG00000147475.17	novel	1466	7	NA	NA	-7	-660	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	14.7394029729837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGCCATTGTCTTAGG	37731457	True	NA	NA	False	TATAAA	-11	NA	37736615	37745888	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_37736679_37737907_37738030_37744354_37744417_37744570_37744697_37745568
WTC11_00083837	chr8	+	1821	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	-14	-1037	-14	1037	multi-exon	FALSE	canonical	3	392	junction_1	28.7672653471886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGATCTTTTATTTA	37754212	True	NA	73	True	AATAAA	-17	NA	37762580	37767778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
WTC11_00083838	chr8	+	1682	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	-61	-1062	-1	1037	multi-exon	FALSE	canonical	3	48	junction_4	167.847400933109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGATCTTTTATTTA	37754225	True	NA	73	True	AATAAA	-17	NA	37762593	37767778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
WTC11_00083840	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	73.976554476705	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	37754276	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
WTC11_00083841	chr8	+	928	5	NNC	ENSG00000147471.12	novel	516	5	NA	NA	1	1690	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	183.277794617897	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGGTATCTCCTTA	37754287	True	NA	NA	False	NA	NA	NA	37762655	37768431	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37767826
WTC11_00083843	chr8	+	6978	19	FSM	ENSG00000020181.18	ENST00000412232.3	6944	19	-34	0	-34	0	multi-exon	FALSE	canonical	3	12	junction_14	2.89155859548291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTAACCAGGCCAGCTGC	37796560	True	NA	NA	False	NA	NA	NA	37796848	37844896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37797535_37814895_37814968_37828887_37828960_37829260_37829333_37829487_37829560_37829850_37830015_37830709_37830924_37831422_37831588_37833009_37833209_37833687_37833838_37833966_37834129_37835173_37835399_37835553_37835771_37837730_37837940_37838955_37839084_37839498_37839623_37840120_37840267_37840759_37840850_37841085
WTC11_00083844	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	2884	junction_1	59.5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	38006138	True	NA	19	True	AATAAA	-26	NA	38030533	38060365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38030719_38057080_38057261_38059903
WTC11_00083845	chr8	+	911	1	FSM	ENSG00000260949.1	ENST00000563059.1	911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATACTTATGTGCTTGTC	38062824	False	NA	NA	False	AGTAAA	-20	NA	38062880	38063791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38062900_38063800
WTC11_00083846	chr8	+	2539	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	379	0	0	multi-exon	FALSE	canonical	3	340	junction_1	32.1890250447778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGACACTTTGCTTCCC	38097796	True	NA	6	True	AATAAA	-16	NA	38105528	38139701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
WTC11_00083847	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	85.5473877775093	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38098060	False	NA	8	True	AATAAA	-18	NA	38105792	38139703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
WTC11_00083848	chr8	+	2449	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	-16	0	-16	0	multi-exon	FALSE	canonical	2	13	junction_13	126.874777570932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38104953	True	NA	8	True	AATAAA	-18	NA	38105922	38139703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
WTC11_00083849	chr8	+	530	4	FSM	ENSG00000156735.11	ENST00000521282.1	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	87.4693597146389	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCAGGATATCCGCCTT	38176262	True	NA	NA	False	NA	NA	NA	38176532	38207741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38176590_38177004_38177140_38192687_38192796_38207511
WTC11_00083850	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	34.1933838629639	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	38167893	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
WTC11_00083851	chr8	+	3829	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	527	-2413	260	0	multi-exon	FALSE	canonical	3	82	junction_1	85.7956227839678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	38177071	False	NA	NA	False	AATAAA	-30	NA	38177114	38213301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
WTC11_00083852	chr8	+	2462	17	NIC	ENSG00000085788.14	novel	4682	18	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16.1195484970889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCATAGCTGGGGGTGG	38231018	True	NA	-1	True	TATAAA	-15	NA	38231584	38260807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_38231860_38232986_38233215_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38260599
WTC11_00083853	chr8	+	4693	18	FSM	ENSG00000085788.14	ENST00000397166.7	4682	18	-11	0	-11	0	multi-exon	FALSE	canonical	3	33	junction_3	9.7466168382874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTTTATGTAT	38231554	False	NA	84	True	AAGAAA	-17	NA	38231573	38262836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38260599
WTC11_00083855	chr8	+	1180	1	FSM	ENSG00000272092.1	ENST00000607047.1	1098	1	-88	6	-88	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATACTCTGTAGACGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	38382275	38383455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38382300_38383500
WTC11_00083858	chr8	+	7813	13	FSM	ENSG00000147526.20	ENST00000317827.9	7770	13	-43	0	-43	0	multi-exon	FALSE	canonical	0	0	junction_1	20.3203510468364	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTGTGTGGT	38785350	True	NA	6	True	AATAAA	-19	NA	38787192	38853028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827376_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
WTC11_00083859	chr8	+	7753	13	NIC	ENSG00000147526.20	novel	7770	13	NA	NA	-70	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	19.2055764471329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTGTGTGGT	38785323	True	NA	6	True	AATAAA	-19	NA	38787165	38853028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
WTC11_00083862	chr8	+	5077	22	FSM	ENSG00000168615.13	ENST00000676617.1	5077	22	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_15	48.464354434921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	38992454	True	NA	-24	True	AATACA	-1	NA	38996913	39104968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39076146_39076276_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39091347_39101862_39101931_39103606
WTC11_00083864	chr8	+	3761	21	NIC	ENSG00000168615.13	novel	4538	22	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	42.2940894215728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTACAATAAATAAAATA	38992466	True	NA	-23	True	AATACA	-2	NA	38996925	39104969	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
WTC11_00083865	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_18	27.4217087975692	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	38992513	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
WTC11_00083869	chr8	+	1138	7	FSM	ENSG00000131203.13	ENST00000519154.5	1138	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	57.1413938304701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTATCCTCACTTCAAAA	39901511	True	NA	NA	False	NA	NA	NA	39902370	39922654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39902449_39913402_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
WTC11_00083870	chr8	+	1996	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_6	39.9028821014222	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	39901444	True	NA	NA	False	AATAAA	-21	NA	39902303	39928790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
WTC11_00083871	chr8	+	1713	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	-4	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	59.7887465571577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901511	True	NA	12	True	AATAAA	-17	NA	39902370	39928426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
WTC11_00083874	chr8	+	1983	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	30	-1205	30	0	multi-exon	TRUE	canonical	2	4	junction_1	263.602731397078	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	NA	False	NA	NA	False	AATAAA	-10	NA	41490425	41510974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
WTC11_00083875	chr8	+	1984	6	FSM	ENSG00000147533.18	ENST00000687203.1	2275	6	176	115	-80	0	multi-exon	FALSE	canonical	3	434	junction_1	104.088423948103	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	41490481	41510980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
WTC11_00083876	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	265.097416056815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	41481317	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
WTC11_00083877	chr8	+	2119	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	-20	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	67.9535687068751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	41481317	True	NA	NA	False	AATAAA	-16	NA	41490561	41510980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
WTC11_00083880	chr8	+	762	7	FSM	ENSG00000147536.12	ENST00000523277.6	3873	7	-20	3131	-1	-340	multi-exon	FALSE	canonical	3	124	junction_5	13.7163730223733	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCGTGCATCTTTC	41523254	True	NA	NA	False	AAGAAA	-35	NA	41529228	41541899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808
WTC11_00083881	chr8	+	1177	8	FSM	ENSG00000147536.12	ENST00000518671.5	1158	8	-19	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.0838972008699	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAACTAGGCAT	41523243	True	NA	NA	False	AAAACA	-9	NA	41529217	41542402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529389_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
WTC11_00083882	chr8	+	3813	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	-43	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	14.8804761828569	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	41523243	True	NA	12	True	AATAAA	-21	NA	41529217	41545030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
WTC11_00083883	chr8	+	870	3	FSM	ENSG00000158669.11	ENST00000520258.1	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTTTGCAGTTGCCTCCT	41573819	True	NA	NA	False	NA	NA	NA	41578187	41598925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578279_41584772_41584918_41598291
WTC11_00083884	chr8	+	6310	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	-12	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	27.7648858972784	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	41573819	True	NA	NA	False	AATAAA	-17	NA	41578187	41625001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
WTC11_00083885	chr8	+	768	6	FSM	ENSG00000158669.11	ENST00000519853.5	768	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	134.316640815649	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGAGTGTGGCAGTCCA	41573846	True	NA	NA	False	NA	NA	NA	41578214	41610812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578279_41598291_41598477_41599233_41599305_41609415_41609486_41609654_41609956_41610735
WTC11_00083886	chr8	+	1230	2	FSM	ENSG00000158669.11	ENST00000520223.1	1101	2	-129	0	71	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGTGCCAGCCATTTT	41573917	True	NA	NA	False	NA	NA	NA	41578285	41599226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578581_41598291
WTC11_00083888	chr8	+	997	6	FSM	ENSG00000158669.11	ENST00000519921.5	997	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	23.5423023512995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAGACCTCCGATGGTA	41610241	False	NA	NA	False	NA	NA	NA	41610255	41615048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962
WTC11_00083889	chr8	+	736	3	FSM	ENSG00000158669.11	ENST00000521349.1	842	3	106	0	-68	0	multi-exon	FALSE	canonical	3	372	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCCGTGTGCCAGGGA	41618622	False	NA	102	True	NA	NA	NA	41618637	41621373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41618813_41618897_41618978_41620892
WTC11_00083890	chr8	+	1063	3	FSM	ENSG00000158669.11	ENST00000518628.1	1063	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	178.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGGGCGGCCACCCG	41618690	False	NA	123	True	NA	NA	NA	41618705	41621394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41618813_41618897_41619352_41620892
WTC11_00083892	chr8	+	3510	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	-16	0	-16	0	multi-exon	FALSE	canonical	3	70	junction_1	18.2581317499902	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	42152630	True	NA	24	True	AATAAA	-18	NA	42153046	42171183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
WTC11_00083893	chr8	+	3629	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	40	0	-7	0	multi-exon	FALSE	canonical	3	22	junction_1	35.3022225019934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	23	True	AATAAA	-17	NA	42152985	42171182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
WTC11_00083897	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.9538914210249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42154591	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
WTC11_00083905	chr8	+	5612	21	ISM	ENSG00000104365.16	ENST00000520810.6	3938	22	2	23	2	0	intron_retention	FALSE	canonical	3	77	junction_5	21.442656085476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTGGAAACCCTGGT	NA	False	NA	-7	True	AATAAA	-3	NA	42271303	42332437	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123
WTC11_00083906	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_5	21.2645575052878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	NA	False	NA	16	True	AATAAA	-26	NA	42271301	42332460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
WTC11_00083909	chr8	+	5021	19	FSM	ENSG00000104365.16	ENST00000520201.5	5002	19	-19	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	31.1374888177667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGACAGTGGGAAATA	42269972	True	NA	11	True	AATAAA	-21	NA	42271369	42332455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42271470_42272082_42272206_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
WTC11_00083911	chr8	+	3694	20	FSM	ENSG00000104365.16	ENST00000520655.5	3777	20	83	0	-26	0	multi-exon	FALSE	canonical	3	8	junction_13	30.5515322346303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCTATATTTTGTAAC	42270148	False	NA	15	True	ATTAAA	-18	NA	42271545	42331909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
WTC11_00083914	chr8	+	1310	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	-20	0	-8	0	multi-exon	FALSE	canonical	3	64	junction_2	27.6771325942384	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336878	True	NA	16	True	AATAAA	-17	NA	42338473	42371808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
WTC11_00083915	chr8	+	1218	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	27.1971965467031	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336912	True	NA	16	True	AATAAA	-17	NA	42338507	42371808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
WTC11_00083916	chr8	+	1318	14	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	45.3981726817307	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATGATGATGATCTT	42336915	True	NA	14	True	AATAAA	-15	NA	42338510	42371806	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
WTC11_00083917	chr8	+	1184	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	40.0217822636068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336917	True	NA	16	True	AATAAA	-17	NA	42338512	42371808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
WTC11_00083919	chr8	+	580	6	FSM	ENSG00000078668.14	ENST00000520115.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	488.294337464608	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATAATTTCGCCCTGGG	42379407	True	NA	NA	False	NA	NA	NA	42391845	42401959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42391929_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787
WTC11_00083920	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1118	junction_5	81.955272354295	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	42379441	True	NA	62	True	NA	NA	NA	42391879	42405937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
WTC11_00083922	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	290.050953378119	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	42540948	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
WTC11_00083923	chr8	+	808	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	-15	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	117.941605136704	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535555	True	NA	14	True	AATAAA	-27	NA	42541597	42552980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
WTC11_00083925	chr8	+	2505	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	1199	0	1016	multi-exon	FALSE	canonical	3	90	junction_1	256.190467339352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATAATGGCTTCAAGT	42535542	True	NA	NA	False	NA	NA	NA	42541584	42553996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
WTC11_00083926	chr8	+	14590	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	-242	0	-210	0	multi-exon	FALSE	canonical	3	22	junction_16	12.5418121559125	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	42896720	False	NA	96	True	AATAAA	-15	NA	42896735	43030535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
WTC11_00083927	chr8	+	2710	16	FSM	ENSG00000168172.9	ENST00000527306.1	2325	16	-208	-177	-208	177	multi-exon	FALSE	canonical	3	54	junction_7	7.41350119714026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCAAAAATAGTGTAAAG	42896722	False	NA	NA	False	AGTAAA	-22	NA	42896737	42998333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549
WTC11_00083929	chr8	+	595	5	FSM	ENSG00000168522.13	ENST00000533998.5	581	5	-14	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_2	266.183559785348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTTGATTTACAACCAA	43053566	True	NA	NA	False	NA	NA	NA	43056316	43084757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43069554_43069660_43077215_43077365_43083117_43083181_43084709
WTC11_00083930	chr8	+	995	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	-13	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_1	189.740961979909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	43053566	True	NA	NA	False	AAGAAA	-10	NA	43056316	43085193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
WTC11_00083931	chr8	+	1691	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	-21	-3	-6	0	multi-exon	FALSE	canonical	3	463	junction_5	45.6124982872019	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGAAGTTTGATTTT	43053551	True	NA	27	True	AATAAA	-24	NA	43056301	43085788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
WTC11_00083932	chr8	+	4682	8	FSM	ENSG00000168522.13	ENST00000526755.5	4676	8	-6	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_1	233.588684377878	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGAAGTTTGATTTT	43053551	True	NA	27	True	AATAAA	-24	NA	43056301	43085788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
WTC11_00083933	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	245.456080592843	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	43053604	True	NA	NA	False	AATAAA	-35	NA	43056354	43070353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
WTC11_00083934	chr8	+	597	6	FSM	ENSG00000168522.13	ENST00000531266.5	590	6	-7	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	210.590028253951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATAATGAGCTGCAGT	43053604	True	NA	NA	False	TTTAAA	-3	NA	43056354	43077226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056508_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215
WTC11_00083935	chr8	+	534	4	FSM	ENSG00000168522.13	ENST00000533368.1	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	208.733216224815	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTCGTTACAAACATGT	43053664	True	NA	NA	False	NA	NA	NA	43056414	43077385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215
WTC11_00083936	chr8	+	874	7	FSM	ENSG00000168522.13	ENST00000533336.1	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	42.2548485054937	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTCTTGTGGATATC	43058927	False	NA	NA	False	NA	NA	NA	43058951	43084798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709
WTC11_00083937	chr8	+	2322	3	FSM	ENSG00000168522.13	ENST00000525099.1	7327	3	5005	0	-2976	0	multi-exon	FALSE	canonical	3	562	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATGCCATAGAAGT	43081636	False	NA	19	True	AATAAA	-16	NA	43081651	43085780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43083181_43084709_43084882_43085159
WTC11_00083939	chr8	+	11175	5	FSM	ENSG00000185900.11	ENST00000331373.10	1868	5	0	-9307	0	1561	multi-exon	FALSE	canonical	3	57	junction_1	3.8405728739343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTCTGTGACCTTGC	43086921	True	NA	15	True	AATAAA	-27	NA	43093514	43132741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43093564_43097523_43097616_43102504_43102601_43103527_43103831_43122106
WTC11_00083940	chr8	+	730	3	NNC	ENSG00000165102.15	novel	491	5	NA	NA	-233	-20440	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	13	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATGAAATCAT	43140207	True	NA	NA	False	AATAAA	-20	NA	43140230	43147568	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_43140615_43146947_43147064_43147338
WTC11_00083942	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.1452429044361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	47256493	True	NA	NA	False	NA	NA	NA	47260937	47736306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
WTC11_00083945	chr8	+	2780	15	FSM	ENSG00000164808.17	ENST00000524141.5	2761	15	-19	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.6347835399757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTCTTCAAGGCTTC	47256491	True	NA	NA	False	NA	NA	NA	47260935	47713441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661
WTC11_00083948	chr8	+	2090	11	FSM	ENSG00000164808.17	ENST00000519401.5	2090	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	44.6910505582494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGTTCACTACTTTT	NA	False	NA	12	True	AATAAA	-16	NA	47440400	47735916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47735306
WTC11_00083950	chr8	+	4616	16	FSM	ENSG00000104738.18	ENST00000262105.6	4183	16	-152	-281	-114	281	multi-exon	FALSE	canonical	3	1266	junction_10	107.297385284493	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGGCGGAGCTTGCAG	47960704	False	NA	NA	False	NA	NA	NA	47960783	47978441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
WTC11_00083955	chr8	+	4067	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	-5	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	130.354549570585	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932151	True	NA	8	True	AATAAA	-21	NA	47960935	47978160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
WTC11_00083961	chr8	+	922	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	66	junction_1	2086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	47985060	True	NA	48	True	NA	NA	NA	48008410	48061417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_48008471_48049852_48049979_48060681
WTC11_00083963	chr8	+	4362	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	-20	0	-4	0	multi-exon	FALSE	canonical	3	3322	junction_1	381.393060590602	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	47985060	True	NA	28	True	AATAAA	-19	NA	48008410	48064708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
WTC11_00083968	chr8	+	460	1	FSM	ENSG00000224594.2	ENST00000425197.2	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGAGTAGGTATCTCT	48384561	False	NA	NA	False	NA	NA	NA	48384589	48385049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_48384600_48385000
WTC11_00083969	chr8	+	420	3	FSM	ENSG00000147481.17	ENST00000521574.1	417	3	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	49909756	True	NA	NA	False	AAAAAG	-20	NA	49909800	49911583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_49909905_49910891_49911045_49911420
WTC11_00083970	chr8	+	1016	1	FSM	ENSG00000228801.7	ENST00000684825.1	1005	1	-18	7	-3	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACTTTTTGAAGTGT	51899053	True	NA	NA	False	CATAAA	-18	NA	51899264	51900280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_51899300_51900300
WTC11_00083971	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_3	66.7921215413914	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	54123348	True	NA	NA	False	NA	NA	NA	54135240	54148514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
WTC11_00083972	chr8	+	6421	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	-1944	0	1944	multi-exon	FALSE	canonical	3	170	junction_1	18.3626659284539	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTGATACATTTGCTT	55768491	True	NA	4	True	ATTAAA	-17	NA	55773445	55828389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
WTC11_00083973	chr8	+	5057	13	FSM	ENSG00000254087.8	ENST00000520220.6	5808	13	-1385	2136	-1385	-2136	multi-exon	FALSE	canonical	3	42	junction_2	26.4116714520094	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTCCCAGTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	55878449	56012032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_55880104_55941854_55941929_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
WTC11_00083974	chr8	+	5559	13	FSM	ENSG00000254087.8	ENST00000519728.6	5872	13	0	313	0	-312	multi-exon	FALSE	canonical	3	79	junction_2	18.8569173868194	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCGTAGTTCTCTATTCC	55875457	True	NA	NA	False	NA	NA	NA	55879834	56013856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_55880104_55941854_55941992_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
WTC11_00083976	chr8	+	1684	5	FSM	ENSG00000170791.18	ENST00000303759.3	1684	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	238.494627822096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTTTTGATTTGTAT	56200966	True	NA	13	True	AATAAA	-16	NA	56211755	56218615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
WTC11_00083977	chr8	+	1817	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	-12	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.675170804153	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	56200996	True	NA	NA	False	NA	NA	NA	56211785	56218798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
WTC11_00083980	chr8	+	3160	3	FSM	ENSG00000170791.18	ENST00000522166.1	3157	3	-3	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGAATATTTCT	56200996	True	NA	9	True	ATTAAA	-17	NA	56211785	56217465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56214668_56216388_56216532_56217330
WTC11_00083982	chr8	+	1700	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	-3	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	150.019998666844	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	56200996	True	NA	NA	False	NA	NA	NA	56211785	56218809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
WTC11_00083983	chr8	+	1682	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	-12	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.10078941735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56200996	True	NA	17	True	AATAAA	-20	NA	56211785	56218619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
WTC11_00083984	chr8	+	1690	5	NIC	ENSG00000170791.18	novel	1670	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	238.3792933541	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56201008	True	NA	17	True	AATAAA	-20	NA	56211797	56218619	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
WTC11_00083988	chr8	+	3438	5	FSM	ENSG00000169122.12	ENST00000361488.7	3438	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.7931142241337	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGGTTTCTCTTTGT	57993818	True	NA	11	True	AATAAA	-22	NA	57994553	58148788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_57994807_58031605_58031704_58043183_58043300_58075534_58075624_58145906
WTC11_00083989	chr8	+	732	7	FSM	ENSG00000215114.10	ENST00000522978.1	717	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	61	junction_1	91.1604202613295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTTAGTTTGAAGT	58407209	True	NA	NA	False	NA	NA	NA	58411343	58434941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
WTC11_00083990	chr8	+	812	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	-28	12581	-6	-3	5prime_fragment	FALSE	canonical	3	62	junction_5	71.8721086374958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGAAAGTGGAGTTAT	58407218	True	NA	NA	False	AATAAA	-24	NA	58411352	58435103	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
WTC11_00083993	chr8	+	5681	9	NIC	ENSG00000215114.10	novel	1225	9	NA	NA	0	657	combination_of_known_junctions	TRUE	canonical	3	61	junction_1	71.3980917111935	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGAGACCTGTCTCAGG	58407246	True	NA	-2	True	AATAAA	-7	NA	58411380	58452158	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
WTC11_00083994	chr8	+	618	5	FSM	ENSG00000215114.10	ENST00000521796.1	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.7915252392132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	58416919	False	NA	NA	False	AATAAA	-27	NA	58416929	58435106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
WTC11_00083999	chr8	+	2080	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	-7	0	0	0	multi-exon	FALSE	canonical	3	667	junction_4	92.6437228040842	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	58543476	True	NA	26	True	AATAAA	-19	NA	58553253	58582858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
WTC11_00084000	chr8	+	2264	9	FSM	ENSG00000137575.12	ENST00000630925.1	2076	9	0	-188	0	188	multi-exon	FALSE	canonical	2	30	junction_1	341.06192161395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAAGAAGAGCTGGTT	58561737	False	NA	NA	False	NA	NA	NA	58561747	58583047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
WTC11_00084002	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	99.4769997003717	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	60501195	True	NA	20	True	AATAAA	-34	NA	60516986	60623644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
WTC11_00084004	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_15	28.7396311533614	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	60675895	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
WTC11_00084005	chr8	+	11883	38	NNC	ENSG00000171316.12	novel	11606	38	NA	NA	0	280	intron_retention	FALSE	canonical	3	61	junction_31	30.4310882522018	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTAAGTATTTTATTTT	60675895	True	NA	NA	False	NA	NA	NA	60678739	60868308	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854365_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
WTC11_00084012	chr8	+	1791	1	FSM	ENSG00000254285.3	ENST00000519669.1	1449	1	-78	-264	-78	264	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAGAAATTCGCCAAAAC	NA	False	NA	47	True	NA	NA	NA	61578141	61579932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_61578100_61579900
WTC11_00084016	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	38.3169348982927	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	63152585	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
WTC11_00084017	chr8	+	5617	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	-31	-3199	0	528	multi-exon	FALSE	canonical	3	51	junction_2	180.626686843334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACGCGGGCACAAGCTT	63152585	True	NA	NA	False	NA	NA	NA	63168620	63213314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
WTC11_00084018	chr8	+	4968	5	NNC	ENSG00000185728.17	novel	5095	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	178.057574958214	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCATATCTGTGTTCTT	63152618	True	NA	5	True	AATAAA	-7	NA	63168653	63212779	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_63168815_63169386_63169412_63175330_63175417_63186146_63187746_63209682
WTC11_00084022	chr8	+	596	6	FSM	ENSG00000066855.16	ENST00000523222.5	576	6	-20	0	-20	0	multi-exon	FALSE	canonical	2	4	junction_3	67.2428434853851	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGCACTGCAGAAGAT	65640516	True	NA	NA	False	NA	NA	NA	65644713	65704823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65689565_65689600_65693643_65693760_65704693
WTC11_00084023	chr8	+	2671	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	106	junction_1	17.7798326476824	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	65640516	True	NA	15	True	AATAAA	-29	NA	65644713	65710562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
WTC11_00084026	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	66666051	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66667702_66679720_66680025_66685380
WTC11_00084027	chr8	+	815	2	ISM	ENSG00000288596.2	ENST00000661636.1	1835	3	-77	2863	-74	0	5prime_fragment	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665977	True	NA	3	True	AATAAA	-15	NA	66667540	66678295	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_66667702_66677641
WTC11_00084028	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.3137084989848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666088	False	NA	3	True	AATAAA	-15	NA	66667651	66678295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
WTC11_00084029	chr8	+	899	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-37	0	0	0	intron_retention	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666051	True	NA	3	True	AATAAA	-15	NA	66667614	66678295	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_66667702_66676744_66676903_66677641
WTC11_00084030	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	8.07363572066513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	66774281	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
WTC11_00084031	chr8	+	577	6	FSM	ENSG00000104205.16	ENST00000518388.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.0829767070025	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGATGAGGATGAAAGA	66775489	True	NA	NA	False	AAAACA	-15	NA	66775565	66822427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66775637_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371
WTC11_00084032	chr8	+	4053	16	FSM	ENSG00000104205.16	ENST00000345714.8	4055	16	2	0	2	0	multi-exon	FALSE	canonical	3	41	junction_7	8.05646738134442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	NA	False	NA	6	True	AATAAA	-18	NA	66793615	66862022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
WTC11_00084035	chr8	+	4454	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	22	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.3495937314321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	67062085	True	NA	NA	False	AATAAA	-22	NA	67064361	67196263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00084036	chr8	+	4888	29	FSM	ENSG00000104218.16	ENST00000676317.1	4882	29	-6	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	10.3166078707676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	67062085	True	NA	NA	False	ATTAAA	-15	NA	67064361	67196778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00084037	chr8	+	4870	29	FSM	ENSG00000104218.16	ENST00000677592.1	4864	29	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.6066116287493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	67062085	True	NA	NA	False	ATTAAA	-15	NA	67064361	67196778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00084043	chr8	+	1834	1	FSM	ENSG00000271966.1	ENST00000607397.1	1113	1	-722	1	-722	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCATTTCTTTTATTTT	67343226	False	NA	NA	False	AATAAA	-14	NA	67343252	67345086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67343300_67345100
WTC11_00084052	chr8	+	4367	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	-204	-3355	-204	3355	multi-exon	FALSE	canonical	3	731	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTTCTTATGATAAT	71675082	False	NA	NA	False	AATAGA	-29	NA	71675095	71706141	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_71675536_71702214
WTC11_00084053	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	54	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	71663462	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_71675536_71695940_71696034_71702214
WTC11_00084055	chr8	+	2965	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	-90	58	-82	0	multi-exon	FALSE	canonical	3	89	junction_2	2048.54521701935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGTATTTCCTATTAA	73008753	False	NA	-72	True	CATAAA	-27	NA	73008773	73047653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
WTC11_00084056	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	4819	junction_1	270.241044666095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	72959181	True	NA	NA	False	NA	NA	NA	73008855	73025699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
WTC11_00084059	chr8	+	2723	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	-8	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	2013.86725812138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959181	True	NA	NA	False	AATAAA	-7	NA	73008855	73047479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
WTC11_00084062	chr8	+	3337	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	-8	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_7	1424.6238836537	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	72959181	True	NA	10	True	AATATA	-15	NA	73008855	73048123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
WTC11_00084063	chr8	+	4256	4	FSM	ENSG00000147601.15	ENST00000678912.1	4242	4	-14	0	-14	0	multi-exon	FALSE	canonical	1	27	junction_1	2379.39100518506	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGTATTTCCTATTAA	73028369	False	NA	-72	True	CATAAA	-27	NA	73028588	73047653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73030956_73032041_73032134_73039115_73039220_73045960
WTC11_00084064	chr8	+	5342	3	FSM	ENSG00000147601.15	ENST00000518961.1	3300	3	-1364	-678	-14	0	multi-exon	FALSE	canonical	3	4903	junction_1	163.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGTATTTCCTATTAA	73028369	False	NA	-72	True	CATAAA	-27	NA	73028588	73047653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73032134_73039115_73039220_73045960
WTC11_00084067	chr8	+	802	1	Genic_Genomic	ENSG00000253636.1	novel	NA	NA	NA	NA	10291	209	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAGTGAAGGAGTGCC	73062438	False	NA	NA	False	NA	NA	NA	73062468	73063270	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_73062500_73063300
WTC11_00084074	chr8	+	2032	3	FSM	ENSG00000175606.11	ENST00000312184.6	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	11	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTAAAATTGCTGTC	73970272	True	NA	10	True	ATTAAA	-14	NA	73976194	73982783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73976492_73978755_73978862_73981154
WTC11_00084075	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	65.9786897414612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	74346816	True	NA	-43	True	NA	NA	NA	74350394	74365775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
WTC11_00084076	chr8	+	4145	5	FSM	ENSG00000104381.14	ENST00000674944.1	4137	5	-8	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.882512210401	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCAAAATTTGTATAAAT	74346816	True	NA	NA	False	NA	NA	NA	74350394	74366582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938
WTC11_00084077	chr8	+	5484	4	FSM	ENSG00000104381.14	ENST00000675706.1	5484	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	21.4009345590327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTATTCTGTAAGATCA	74346816	True	NA	NA	False	NA	NA	NA	74350394	74366816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883
WTC11_00084079	chr8	+	4831	6	FSM	ENSG00000104381.14	ENST00000220822.12	3645	6	-8	-1178	0	-6	multi-exon	FALSE	canonical	3	100	junction_2	27.1263709330976	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTTTTGTCTTCAGTC	74346816	True	NA	NA	False	CATAAA	-19	NA	74350394	74368054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
WTC11_00084080	chr8	+	956	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	-18	7	0	-3	multi-exon	FALSE	canonical	1	6	junction_5	52.6513057767801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCTTGCTATCTTAT	74346816	True	NA	NA	False	AATAAA	-18	NA	74350394	74488872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
WTC11_00084083	chr8	+	4168	11	NIC	ENSG00000164749.13	novel	410	5	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.90516780926679	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAGAAAAAAAAAATCACT	75407608	True	NA	NA	False	AATAAA	-3	NA	75407889	75566819	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_75407965_75490088_75490209_75543810_75543980_75547586_75547682_75551387_75551495_75553041_75553198_75555981_75556070_75558517_75558671_75558800_75559038_75560343_75560467_75563974
WTC11_00084084	chr8	+	4119	5	NNC	ENSG00000171033.13	novel	3962	4	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	104.57144686768	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	78513213	True	NA	9	True	ATTAAA	-25	NA	78516296	78605267	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_78516469_78567480_78567595_78572810_78572940_78598357_78598536_78601741
WTC11_00084085	chr8	+	1751	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	-15	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	96.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	78513256	True	NA	-23	True	NA	NA	NA	78516339	78603185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78516469_78598357_78598536_78601741
WTC11_00084086	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	36.9173250505625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	78513256	True	NA	9	True	ATTAAA	-25	NA	78516339	78605267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
WTC11_00084087	chr8	+	507	2	NNC	ENSG00000171033.13	novel	1736	3	NA	NA	-5	-66329	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAGAGTATAACAACTA	78513266	True	NA	NA	False	AATAAA	-21	NA	78516349	78535769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_78516469_78535381
WTC11_00084088	chr8	+	975	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	6	0	-6	multi-exon	FALSE	canonical	3	118	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACATCCTCCCATGT	78662936	True	NA	NA	False	NA	NA	NA	78666088	78679384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78666165_78675786_78675864_78678562
WTC11_00084089	chr8	+	3333	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	61	junction_7	25.8647322622911	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	78662913	True	NA	14	True	AATAAA	-18	NA	78666065	78719765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
WTC11_00084091	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	79610856	True	NA	NA	False	AATAAA	-23	NA	79611116	79666158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
WTC11_00084093	chr8	+	1136	1	FSM	ENSG00000260317.1	ENST00000569134.1	1805	1	597	72	597	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCACTTGTGTACTTTTC	NA	False	NA	NA	False	NA	NA	NA	80541896	80543032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_80541900_80543000
WTC11_00084095	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_2	232.626070956995	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	81274885	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
WTC11_00084096	chr8	+	986	4	FSM	ENSG00000164687.11	ENST00000396359.1	986	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	1065.43918956769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTATGCATTCTTTA	81275216	False	NA	NA	False	AATAAA	-21	NA	81280866	81284777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_81281314_81283365_81283539_81283872_81283975_81284513
WTC11_00084102	chr8	+	3412	18	NIC	ENSG00000133739.16	novel	3726	19	NA	NA	16	-88	combination_of_known_junctions	TRUE	canonical	3	41	junction_5	18.0702205844953	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTAGCCATCTCCACA	85105625	True	NA	-85	True	GATAAA	-23	NA	85107253	85145988	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
WTC11_00084103	chr8	+	2077	8	FSM	ENSG00000133740.11	ENST00000416274.7	1964	8	0	-113	0	113	multi-exon	FALSE	canonical	2	212	junction_6	80.7950291459436	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAGGAGAAAGTATTAT	85175737	True	NA	NA	False	NA	NA	NA	85177153	85214631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212156_85212205_85213752
WTC11_00084106	chr8	+	3544	7	FSM	ENSG00000185015.8	ENST00000321764.4	3884	7	336	4	336	-4	multi-exon	TRUE	canonical	2	3	junction_1	1.7950549357115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAACTGTGTCAGGGCC	85245760	True	NA	6	True	AATAAA	-15	NA	85245793	85284069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85245866_85250739_85250938_85259420_85259540_85266607_85266704_85267901_85267965_85268471_85268628_85281229
WTC11_00084108	chr8	+	1712	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	-151	1	-112	-1	multi-exon	FALSE	canonical	3	85	junction_1	10.1816828995342	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGGGTTATTTATTTAT	85462918	True	NA	16	True	AATAAA	-43	NA	85463855	85481492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
WTC11_00084110	chr8	+	3743	24	NIC	ENSG00000123124.14	novel	4877	25	NA	NA	17	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	25.6478994227892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTCTGTTACATCAG	86342510	True	NA	19	True	AATAAA	-15	NA	86342563	86467479	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_86342931_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
WTC11_00084111	chr8	+	4874	25	FSM	ENSG00000123124.14	ENST00000517970.6	4877	25	3	0	3	0	multi-exon	FALSE	canonical	3	59	junction_1	21.3062572316731	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCATAAAAGAGTTAAGT	86342504	False	NA	NA	False	AAAAAG	-9	NA	86342549	86468503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86342931_86368938_86369032_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
WTC11_00084115	chr8	+	4870	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	-13	0	-13	0	multi-exon	FALSE	canonical	3	187	junction_2	28.1790452952189	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	86509968	True	NA	15	True	AATAAA	-20	NA	86514421	86561498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
WTC11_00084116	chr8	+	566	5	FSM	ENSG00000085719.13	ENST00000517354.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	20.994046775217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTAAGTGCTCTATGG	NA	False	NA	NA	False	CATAAA	-45	NA	86546627	86554979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86546682_86547710_86547771_86548300_86548435_86551045_86551235_86554850
WTC11_00084118	chr8	+	2526	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	-10	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	35.3723055510946	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	89756099	True	NA	10	True	AATAAA	-20	NA	89757805	89791064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
WTC11_00084119	chr8	+	3029	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	-23	-1090	-23	634	multi-exon	FALSE	canonical	3	59	junction_1	49.3783578323765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGCTTTCCCTTTTCTC	89756076	True	NA	NA	False	AATAAA	-16	NA	89757782	89791698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
WTC11_00084121	chr8	+	4270	6	FSM	ENSG00000164823.11	ENST00000451899.7	4230	6	-46	6	-46	-6	multi-exon	TRUE	canonical	3	123	junction_5	10.507140429251	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATCTTAGTGTTTGGA	89902000	False	NA	NA	False	AATAAA	-28	NA	89902523	89927882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_89902838_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
WTC11_00084124	chr8	+	915	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	-18	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.022112443709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	89996874	True	NA	NA	False	AATAGA	-34	NA	90001457	90051972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
WTC11_00084125	chr8	+	2771	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	-19	8	0	-8	multi-exon	FALSE	canonical	3	300	junction_1	33.4490583749803	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGTGTTGTCTCAA	89996874	True	NA	NA	False	AATAAA	-8	NA	90001457	90053625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
WTC11_00084128	chr8	+	5483	13	FSM	ENSG00000123119.12	ENST00000417640.7	5049	13	-434	0	-400	0	multi-exon	FALSE	canonical	2	19	junction_1	5.76085931090146	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTCTACAAATGAAAAA	90791323	True	NA	NA	False	AATAAA	-16	NA	90791340	90959393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90791986_90801690_90801716_90824716_90824826_90872127_90872154_90881032_90881131_90917491_90917629_90925534_90925657_90928222_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
WTC11_00084132	chr8	+	5705	8	NNC	ENSG00000155100.11	novel	3434	8	NA	NA	0	43083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	77.356054602555	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTTTGTGTCTGTCTT	91063563	True	NA	NA	False	AATAAA	-15	NA	91070361	91130178	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783_91087088_91127597
WTC11_00084135	chr8	+	716	5	ISM	ENSG00000188343.14	ENST00000423990.6	914	8	-49	20210	-17	-1600	5prime_fragment	FALSE	canonical	2	40	junction_4	100.651316434511	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGATGATATATGTGA	93697140	True	NA	NA	False	NA	NA	NA	93700532	93708179	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010
WTC11_00084136	chr8	+	1380	5	ISM	ENSG00000188343.14	ENST00000359421.9	1179	9	-15	20398	-3	-1731	5prime_fragment	FALSE	canonical	0	0	junction_4	117.83754707223	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTATAGTAAACCCTTTT	93697154	True	NA	NA	False	AATAAA	-21	NA	93700546	93708048	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93707201
WTC11_00084137	chr8	+	1913	8	NIC	ENSG00000188343.14	novel	4198	9	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	98.6246233276995	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCAATCATGGCTCTG	93697162	True	NA	14	True	AATAAA	-22	NA	93700554	93729253	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93709770_93709876_93718674_93718789_93726393_93726514_93728204
WTC11_00084145	chr8	+	277	1	FSM	ENSG00000254387.1	ENST00000518490.1	515	1	82	156	82	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTACCTGTGAGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	93849642	93849919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93849600_93849900
WTC11_00084146	chr8	+	4242	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	-32	0	-32	0	multi-exon	FALSE	canonical	3	101	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	93915098	True	NA	11	True	ATTAAA	-22	NA	93916890	93926068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93917080_93922015
WTC11_00084147	chr8	+	4325	4	NNC	ENSG00000164951.16	novel	2554	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	5.90668171555645	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	93915098	True	NA	11	True	ATTAAA	-22	NA	93916890	93926068	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_93917080_93917910_93917946_93919095_93919144_93922015
WTC11_00084149	chr8	+	3607	14	FSM	ENSG00000104413.18	ENST00000646773.1	3274	14	-125	-208	0	0	multi-exon	FALSE	canonical	3	138	junction_13	125.377347594934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94641025	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94705924
WTC11_00084150	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	185.06711413618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94641025	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
WTC11_00084151	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_14	99.684702938816	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
WTC11_00084152	chr8	+	3756	16	FSM	ENSG00000104413.18	ENST00000358397.9	3756	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	154.416262816525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94696851_94696962_94705924
WTC11_00084153	chr8	+	3590	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635854	True	NA	20	True	AATAAA	-21	NA	94641200	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
WTC11_00084154	chr8	+	2464	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	-654	3	-654	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTTGCGATTTTTTTT	NA	False	NA	17	True	AATAAA	-18	NA	94704999	94707463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94705000_94707500
WTC11_00084156	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_7	21.8586932165627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	94717721	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
WTC11_00084159	chr8	+	569	5	FSM	ENSG00000164941.14	ENST00000519053.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	107.728826225853	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCCTAAAATTAAACAAG	94815478	True	NA	NA	False	NA	NA	NA	94823297	94832031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94823562_94827262_94827404_94827721_94827794_94828974_94829027_94831991
WTC11_00084160	chr8	+	2482	22	FSM	ENSG00000164941.14	ENST00000520526.5	2482	22	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	72.5641478662539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTACACAATTAGTGG	94828979	True	NA	13	True	AATAAA	-30	NA	94828991	94880314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94876073_94876148_94876220_94876286_94876445_94876490_94880117
WTC11_00084166	chr8	+	813	7	FSM	ENSG00000156170.13	ENST00000523337.5	796	7	-17	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	81.6341772108281	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAAAGGTGTTCCTTC	95023364	True	NA	NA	False	NA	NA	NA	95024988	95047087	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_95025206_95031994_95032099_95034007_95034123_95035453_95035577_95041569_95041627_95045544_95045648_95046993
WTC11_00084167	chr8	+	1140	10	NIC	ENSG00000156170.13	novel	1373	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	76.4268390579845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	95023364	True	NA	-12	True	AAAACA	-6	NA	95024988	95057936	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_95025206_95031994_95032099_95034007_95034123_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
WTC11_00084168	chr8	+	1806	9	FSM	ENSG00000156170.13	ENST00000396124.9	1795	9	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	68.056502260989	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACATTCTGCGCTAT	95024940	False	NA	11	True	ATTAAA	-17	NA	95024977	95058710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_95025206_95031994_95032095_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
WTC11_00084171	chr8	+	948	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	-2	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	52.0923158920776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	95023441	True	NA	-12	True	AAAACA	-6	NA	95025065	95057936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
WTC11_00084173	chr8	+	4994	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	-6	2	-6	-2	multi-exon	FALSE	canonical	3	266	junction_5	24.4364254523629	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	96254996	True	NA	NA	False	NA	NA	NA	96261895	96336993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
WTC11_00084176	chr8	+	1926	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	1	5	1	-5	multi-exon	FALSE	canonical	1	4	junction_5	2.6954231805876	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTATGTGTTCAT	96645134	True	NA	2	True	AATAAA	-14	NA	96645242	97143496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
WTC11_00084179	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	25.8680695992838	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	97641428	True	NA	6	True	AATAAA	-23	NA	97644183	97730260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
WTC11_00084180	chr8	+	672	5	FSM	ENSG00000147649.10	ENST00000522313.1	672	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	156.933704155608	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTTCAATATTTTCTGGC	97644629	False	NA	NA	False	AATACA	-32	NA	97644792	97691164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97690951
WTC11_00084181	chr8	+	565	6	FSM	ENSG00000147649.10	ENST00000521933.1	565	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	139.843626955253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAATCTCCCAAACAAATA	97691105	False	NA	NA	False	NA	NA	NA	97691130	97724617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97722878_97723036_97724599
WTC11_00084183	chr8	+	618	5	FSM	ENSG00000104341.17	ENST00000517924.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1905.11658107844	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATGTCAGTGAATCCT	97753520	True	NA	NA	False	NA	NA	NA	97775848	97819164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97776109_97805352_97805465_97815303_97815402_97816057_97816181_97819139
WTC11_00084184	chr8	+	3853	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	-67	-232	-67	0	multi-exon	FALSE	canonical	3	37	junction_6	11.8359412879939	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGTATTCAGTGCAAA	NA	False	NA	3	True	ATTAAA	-15	NA	97868772	98036210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
WTC11_00084185	chr8	+	4107	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	26	0	-26	multi-exon	FALSE	canonical	3	33	junction_16	13.5615879109589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATGGTCAAACTCAA	97868099	True	NA	NA	False	AATACA	-35	NA	97869063	98036698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
WTC11_00084186	chr8	+	3449	18	FSM	ENSG00000132561.14	ENST00000524308.5	3449	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	18.6207831203159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGTATTCAGTGCAAA	97868146	True	NA	3	True	ATTAAA	-15	NA	97869110	98036210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
WTC11_00084188	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	98064357	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_98064728_98089075_98090030_98093220
WTC11_00084194	chr8	+	5116	14	ISM	ENSG00000132549.20	ENST00000357162.7	14011	62	806643	4	-48140	-4	3prime_fragment	TRUE	canonical	3	11	junction_1	5.15327206905976	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCTTTGAATAAGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	99819916	99877576	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
WTC11_00084195	chr8	+	383	1	FSM	ENSG00000287952.1	ENST00000662759.1	1749	1	-9	1375	-9	-1375	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAAAAGACCTCTAGTG	NA	False	NA	NA	False	NA	NA	NA	99893363	99893746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99893400_99893700
WTC11_00084197	chr8	+	1625	4	ISM	ENSG00000104450.13	ENST00000388798.7	3695	19	74872	2	288	-1	3prime_fragment	FALSE	canonical	2	6	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTACTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	100233458	100241902	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_100233538_100239239_100239405_100240402_100240772_100240890
WTC11_00084199	chr8	+	5281	16	FSM	ENSG00000083307.12	ENST00000646743.1	5232	16	-49	0	-49	0	multi-exon	FALSE	canonical	3	31	junction_8	5.60793089195016	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTCTGGTGCTTTC	101489460	True	NA	27	True	AATAAA	-23	NA	101492389	101669726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667_101573825_101577407_101577520_101599056_101599152_101619538_101619698_101631636_101631725_101632225_101632366_101636896_101636929_101644130_101644226_101649413_101649500_101664453_101664519_101666588
WTC11_00084204	chr8	+	2048	2	FSM	ENSG00000246263.4	ENST00000499653.1	2048	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTTGACATTTCTT	102243092	False	NA	1	True	AATAAA	-16	NA	102243608	102253333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102244122_102251798
WTC11_00084205	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	102863881	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102864624_102865102
WTC11_00084207	chr8	+	905	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	-16	-133	-16	-5	multi-exon	TRUE	canonical	0	0	junction_3	12.328828005938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATATATGTATCAATAT	102929928	True	NA	6	True	ATTAAA	-15	NA	102930165	102977871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
WTC11_00084214	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.3834675443528	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103297463	True	NA	16	True	AATAAA	-19	NA	103298897	103332866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
WTC11_00084219	chr8	+	5300	10	FSM	ENSG00000164934.14	ENST00000518554.2	5300	10	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	239.064276702024	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGGCCTATTTTTGG	103405916	True	NA	9	True	ATTAAA	-18	NA	103415411	103443450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
WTC11_00084223	chr8	+	1115	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	NA	False	NA	15	True	AATAAA	-17	NA	106270069	106272774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_106270368_106271957
WTC11_00084224	chr8	+	1298	2	FSM	ENSG00000164830.19	ENST00000521369.2	1318	2	15	5	15	-5	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATGTTTGCCTGTATTG	NA	False	NA	NA	False	AATAAA	-9	NA	106270158	106272894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106270368_106271805
WTC11_00084225	chr8	+	1241	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	-93	0	7	0	multi-exon	FALSE	canonical	2	6	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106269961	True	NA	15	True	AATAAA	-17	NA	106270196	106272774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106270368_106271704
WTC11_00084226	chr8	+	4472	15	NIC	ENSG00000164830.19	novel	4406	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	20.7187187374714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	106656104	True	NA	NA	False	AATAAA	-6	NA	106657853	106752679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
WTC11_00084227	chr8	+	4406	14	FSM	ENSG00000164830.19	ENST00000312046.10	4406	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	22.0808090924566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGGATTTATTGAAT	106656104	True	NA	NA	False	AATAAA	-21	NA	106657853	106752694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
WTC11_00084228	chr8	+	479	2	FSM	ENSG00000164830.19	ENST00000521864.1	516	2	4	33	4	-33	multi-exon	FALSE	canonical	3	129	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCATGTGGAACCCAAA	NA	False	NA	NA	False	ATTAAA	-43	NA	106740246	106742451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106740496_106742221
WTC11_00084229	chr8	+	550	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	2	-20	2	20	multi-exon	FALSE	canonical	3	349	junction_2	21.5450110234365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTAAATAGATTTAAGA	108437456	True	NA	NA	False	TTTAAA	-23	NA	108443634	108456093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
WTC11_00084230	chr8	+	3546	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	-20	1	3	-1	multi-exon	FALSE	canonical	3	318	junction_6	36.2403090494549	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTTTCCTGTTACT	108437425	True	NA	16	True	AATAAA	-20	NA	108443603	108489195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
WTC11_00084231	chr8	+	1497	5	FSM	ENSG00000120533.13	ENST00000521662.5	562	5	0	-935	0	0	multi-exon	FALSE	canonical	3	736	junction_1	1171.19455578482	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	109310458	True	NA	NA	False	NA	NA	NA	109334323	109344599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340488_109340564_109343404
WTC11_00084233	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1442.82890531067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	109310458	True	NA	-19	True	NA	NA	NA	109334323	109343624	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
WTC11_00084234	chr8	+	2968	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	-2	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1269.94830111308	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	109310458	True	NA	12	True	AATAAA	-15	NA	109334323	109345953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
WTC11_00084235	chr8	+	1542	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	-2	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	1285.7204935366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	109310483	True	NA	NA	False	NA	NA	NA	109334348	109344599	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
WTC11_00084237	chr8	+	2052	4	FSM	ENSG00000120533.13	ENST00000517350.5	2150	4	98	0	98	0	multi-exon	FALSE	canonical	3	3293	junction_1	114.77223822278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTCAGTAATGATG	109310613	False	NA	26	True	AATAAA	-22	NA	109334478	109343584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109336205_109339319_109339391_109340488_109340564_109343404
WTC11_00084240	chr8	+	792	6	FSM	ENSG00000147654.15	ENST00000529502.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	97.2798026313787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTATAAGACGGTG	109539702	False	NA	NA	False	NA	NA	NA	109539758	109557917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109557730
WTC11_00084241	chr8	+	2231	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	152	0	-144	multi-exon	FALSE	canonical	3	105	junction_1	51.9575146955023	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCCCTTAGCCTAAGC	109539177	False	NA	NA	False	NA	NA	NA	109540172	109565844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
WTC11_00084242	chr8	+	3784	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-10	-2849	0	2849	multi-exon	FALSE	canonical	3	333	junction_2	873	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATATTTCTCCATTT	114265206	True	NA	5	True	ATTAAA	-17	NA	114282066	114307654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_114282295_114284218_114284534_114304413
WTC11_00084248	chr8	+	16003	4	NNC	ENSG00000254339.6	novel	730	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_3	129.175161011017	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGGTGCTAGGTGT	114265275	False	NA	NA	False	AATAAA	-10	NA	114282135	114304801	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_114282295_114284252_114284515_114287721_114302916_114304413
WTC11_00084250	chr8	+	1805	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	-2	488	-2	-488	multi-exon	FALSE	canonical	3	9	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATATTTATAATGGTTA	NA	False	NA	15	True	AATAAA	-18	NA	116938204	116943999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_116938568_116942557
WTC11_00084258	chr8	+	6486	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	-18	1541	-18	951	multi-exon	TRUE	canonical	3	20	junction_47	6.7565838990283	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTGGATTCTTTTT	120124141	True	NA	7	True	AATAAA	-11	NA	120125083	120372032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
WTC11_00084262	chr8	+	3070	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	-3	0	-3	0	multi-exon	FALSE	canonical	3	35	junction_17	14.3789024082897	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	120442814	True	NA	NA	False	AATAAA	-19	NA	120445415	120523636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
WTC11_00084266	chr8	+	3295	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-44	176	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAATAAAAATTTAGAA	123070244	True	NA	NA	False	AATATA	-5	NA	123072637	123104377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
WTC11_00084269	chr8	+	384	3	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	3	-6789	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	92	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGTAGTTTCCTTTTT	123070322	True	NA	3	True	ATTAAA	-19	NA	123072715	123077480	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_123072847_123077110_123077258_123077374
WTC11_00084273	chr8	+	1291	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	-19	219	-19	0	multi-exon	FALSE	canonical	3	48	junction_1	15.7480157480236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGAAGATTTTT	123415191	True	NA	14	True	AATAAA	-16	NA	123416706	123442021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
WTC11_00084274	chr8	+	1320	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	-19	218	0	1	multi-exon	FALSE	canonical	3	58	junction_1	12.6491106406735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGAAGATTTTTG	123415239	True	NA	15	True	AATAAA	-17	NA	123416754	123442022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
WTC11_00084281	chr8	+	657	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	-21	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1384.67428982013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	124524471	True	NA	16	True	AATAAA	-17	NA	124539122	124549978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
WTC11_00084283	chr8	+	3294	3	FSM	ENSG00000147684.10	ENST00000677782.1	3288	3	-6	0	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTGGTATGACTGAC	124524510	True	NA	12	True	AATAAA	-13	NA	124539161	124549974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124539288_124543086_124543280_124546999
WTC11_00084284	chr8	+	1434	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	-16	5	0	-5	multi-exon	FALSE	canonical	3	328	junction_1	1261.20497937488	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACTTGAAATACAGGAC	124524510	True	NA	NA	False	NA	NA	NA	124539161	124550763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
WTC11_00084285	chr8	+	2068	3	FSM	ENSG00000147684.10	ENST00000518657.6	2496	3	265	163	265	-163	multi-exon	FALSE	canonical	3	2962	junction_2	40.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATCCCTCATTAGCTA	124527519	False	NA	NA	False	GATAAA	-42	NA	124542170	124550605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124543280_124546999_124547114_124549760
WTC11_00084292	chr8	+	1184	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	-3	2	-3	-2	multi-exon	FALSE	canonical	3	67	junction_1	33.9521722427299	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTTTTAGTGGACAT	125089887	True	NA	NA	False	AATAAA	-10	NA	125091840	125182794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
WTC11_00084295	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.2031744746377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	125089916	True	NA	-40	True	AAAACA	-42	NA	125091869	125367075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
WTC11_00084296	chr8	+	1274	9	NNC	ENSG00000156831.8	novel	1188	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	52.4309069156733	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089924	True	NA	5	True	AATAAA	-17	NA	125091877	125367120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_125091959_125099453_125099558_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
WTC11_00084297	chr8	+	771	6	NIC	ENSG00000156831.8	novel	765	6	NA	NA	51	-59	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	63.0003174595176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTGCGTTTTATTG	125089976	True	NA	16	True	TATAAA	-30	NA	125091929	125182371	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125155999_125156099_125182102
WTC11_00084304	chr8	+	613	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCTCATTGCCGCCCTT	127433919	False	NA	NA	False	ACTAAA	-35	NA	127433930	127434543	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_127433900_127434500
WTC11_00084306	chr8	+	2150	3	FSM	ENSG00000136997.21	ENST00000524013.2	2150	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	227.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATTGTTTTTAGAAA	127732681	True	NA	-28	True	TTTAAA	-9	NA	127736219	127741372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127736624_127738250_127739020_127740395
WTC11_00084307	chr8	+	3505	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	-11	227	0	-227	multi-exon	FALSE	canonical	3	324	junction_1	114	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGAGTCCTTGAAAAG	127732681	True	NA	NA	False	NA	NA	NA	127736219	127742724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127736624_127738247_127739020_127740395
WTC11_00084308	chr8	+	1877	2	FSM	ENSG00000249859.13	ENST00000523427.2	837	2	-646	-394	-605	394	multi-exon	FALSE	canonical	3	115	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGTGATGTTGGCT	127793688	True	NA	NA	False	NA	NA	NA	127793920	127891651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588
WTC11_00084313	chr8	+	1472	8	NIC	ENSG00000249859.13	novel	1460	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	47.4001636094653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAATGCCGTGGTCTTTC	127792591	True	NA	32	True	ATTAAA	-12	NA	127794551	128101250	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_127794735_127795893_127796009_127816827_127816885_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
WTC11_00084315	chr8	+	1414	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	-4	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	24.7571538482651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	127792594	True	NA	36	True	ATTAAA	-16	NA	127794554	128101254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
WTC11_00084317	chr8	+	2089	6	FSM	ENSG00000249859.13	ENST00000666147.1	2097	6	2	6	2	0	multi-exon	FALSE	canonical	1	10	junction_1	46.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAATGCCGTGGTCTTTC	NA	False	NA	32	True	ATTAAA	-12	NA	127997047	128101250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127998360_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
WTC11_00084318	chr8	+	1309	6	FSM	ENSG00000249859.13	ENST00000656999.1	1314	6	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.2746592528349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAATGCCGTGGTCTTTC	NA	False	NA	32	True	ATTAAA	-12	NA	127998028	128101250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127998360_128009589_128009719_128010317_128010445_128031958_128032273_128096517_128096655_128100979
WTC11_00084319	chr8	+	1793	2	FSM	ENSG00000249859.13	ENST00000667630.1	1634	2	-161	2	-161	0	multi-exon	FALSE	canonical	3	138	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	NA	False	NA	36	True	ATTAAA	-16	NA	128095136	128101254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_128096655_128100979
WTC11_00084324	chr8	+	2826	3	NNC	ENSG00000253507.6	novel	884	5	NA	NA	-76	-4	intron_retention	FALSE	canonical	3	382	junction_2	1357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTATTTGCCTGTT	131308757	False	NA	23	True	AATAAA	-16	NA	131310395	131317883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312555_131312730_131315548
WTC11_00084325	chr8	+	11452	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-81	8598	intron_retention	FALSE	canonical	3	1149	junction_2	973.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCCTTATTTCTCATGC	131308752	False	NA	76	True	AATAAA	-13	NA	131310390	131326485	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312555_131312749_131315548
WTC11_00084326	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	1374.85861899405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	131302356	True	NA	NA	False	NA	NA	NA	131310471	131317506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
WTC11_00084327	chr8	+	5967	2	ISM	ENSG00000253507.6	ENST00000519005.1	731	4	0	-775	0	394	intron_retention	FALSE	canonical	3	3096	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGCTTATCTGAAACC	131302356	True	NA	37	True	NA	NA	NA	131310471	131318281	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_131310713_131312555
WTC11_00084328	chr8	+	990	3	NIC	ENSG00000253507.6	novel	731	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	1094	junction_2	1001	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGCCTGTTTATTCA	131302356	True	NA	29	True	AATAAA	-22	NA	131310471	131317889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_131310713_131312555_131312749_131317333
WTC11_00084329	chr8	+	886	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_1	471.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTATTTGCCTGTT	131302358	True	NA	23	True	AATAAA	-16	NA	131310473	131317883	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312651_131312749_131317333
WTC11_00084330	chr8	+	970	3	NIC	ENSG00000253507.6	novel	884	5	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	73	junction_2	1511.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGCCTGTTTATTCA	131302357	True	NA	29	True	AATAAA	-22	NA	131310472	131317889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_131310713_131312555_131312730_131317333
WTC11_00084331	chr8	+	1325	4	NNC	ENSG00000253507.6	novel	731	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	185	junction_3	1210.78606239455	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGCCTGTTTATTCA	131302356	True	NA	29	True	AATAAA	-22	NA	131310471	131317889	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312555_131312749_131315548_131315884_131317333
WTC11_00084339	chr8	+	6221	21	NNC	ENSG00000129292.21	novel	6233	21	NA	NA	-15	3646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	37.4506007962489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACCTATATGTTAATCT	132769532	True	NA	NA	False	NA	NA	NA	132775342	132852453	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234_132832400_132836539_132836722_132837711_132837812_132839386_132839583_132842514_132842876_132844155_132844319_132845780_132848804_132852428
WTC11_00084343	chr8	+	6249	21	FSM	ENSG00000129292.21	ENST00000395386.7	6233	21	-16	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	36.4044983484184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGTCTCTGTTAATA	132769561	True	NA	4	True	AATAAA	-17	NA	132775371	132848807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132799094_132799173_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234_132832400_132836539_132836722_132837711_132837812_132839386_132839583_132842514_132842876_132844155_132844319_132845780
WTC11_00084344	chr8	+	1806	5	FSM	ENSG00000129292.21	ENST00000485595.5	1810	5	0	4	0	-4	multi-exon	FALSE	canonical	3	125	junction_1	19.5624001594896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTGTGATTTCTTG	132769587	True	NA	NA	False	AATAAA	-16	NA	132775397	132799956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771
WTC11_00084346	chr8	+	2547	14	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	43	13086	1	-4979	5prime_fragment	FALSE	canonical	3	109	junction_10	21.3114409365697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTTTGAATTCCTGGT	132769590	True	NA	8	True	AATAAA	-21	NA	132775400	132832837	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234
WTC11_00084352	chr8	+	725	1	FSM	ENSG00000270137.1	ENST00000602328.1	725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCAGTTTTGTGGTTGG	132826166	False	NA	NA	False	AATAAA	-27	NA	132826178	132826903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132826200_132826900
WTC11_00084357	chr8	+	3284	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	-160	-1446	-160	759	multi-exon	FALSE	canonical	3	30	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAAATTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	140511150	140517913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_140511647_140515125
WTC11_00084362	chr8	+	1873	6	NNC	ENSG00000184489.13	novel	2849	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	28	junction_2	79.9089481847934	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141390560	True	NA	18	True	AATAAA	-13	NA	141391990	141431520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_141392085_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
WTC11_00084364	chr8	+	2845	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	4	0	-4	multi-exon	FALSE	canonical	3	131	junction_1	41.4805978741869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTGCTGTATTTTTT	141390590	True	NA	4	True	AGTAAA	-17	NA	141392020	141432450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
WTC11_00084365	chr8	+	1949	6	NNC	ENSG00000184489.13	novel	1899	5	NA	NA	12	0	intron_retention	FALSE	canonical	3	24	junction_1	80.2854905945028	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141417832	False	NA	18	True	AATAAA	-13	NA	141417920	141431520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_141418019_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
WTC11_00084371	chr8	+	618	4	FSM	ENSG00000160932.11	ENST00000522528.5	606	4	-12	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	434.930134874812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCTCCACCTGCCCCAG	143003138	True	NA	NA	False	NA	NA	NA	143018516	143021924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020887_143020992_143021348_143021434_143021565
WTC11_00084372	chr8	+	1143	4	FSM	ENSG00000160932.11	ENST00000292494.11	1131	4	-12	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	142.030513153571	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003138	True	NA	31	True	AATAAA	-16	NA	143018516	143022409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565
WTC11_00084373	chr8	+	1256	5	FSM	ENSG00000160932.11	ENST00000521699.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	560.567290786753	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCTGAGTGTGGCT	143003138	True	NA	33	True	AATAAA	-18	NA	143018516	143022411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021565
WTC11_00084377	chr8	+	1138	5	Fusion	ENSG00000160932.11_ENSG00000177335.12	novel	1419	5	NA	NA	0	23	multi-exon	FALSE	non_canonical	0	0	junction_4	462.653488044778	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAACTACACTTGTG	143003165	True	NA	NA	False	NA	NA	NA	143018543	143054326	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565_143022406_143054300
WTC11_00084381	chr8	+	1452	4	FSM	ENSG00000250571.7	ENST00000340042.2	1335	4	-117	0	-105	0	multi-exon	FALSE	canonical	3	39	junction_3	14.613540144522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	NA	False	NA	18	True	AATAAA	-20	NA	143267327	143276931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143275896
WTC11_00084384	chr8	+	1297	3	FSM	ENSG00000250571.7	ENST00000523522.5	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	17.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	143268431	False	NA	18	True	AATAAA	-20	NA	143269357	143276931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143269521_143274703_143274803_143275896
WTC11_00084392	chr8	+	4767	12	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	0	-4	intron_retention	TRUE	canonical	3	27	junction_7	25.7957649160343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGGCCAGTAGGCACT	143366467	True	NA	2	True	AATAAA	-10	NA	143368875	143384214	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
WTC11_00084394	chr8	+	1778	7	FSM	ENSG00000158106.14	ENST00000522899.1	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	36.1186316955052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143379319	False	NA	-7	True	NA	NA	NA	143379336	143382779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143379509_143379828_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
WTC11_00084402	chr8	+	2870	2	FSM	ENSG00000183309.12	ENST00000458270.2	2733	2	-137	0	6	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTAATTGGCATCT	143634351	True	NA	13	True	AATAAA	-16	NA	143636024	143652376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143636416_143649897
WTC11_00084403	chr8	+	6522	1	FSM	ENSG00000183309.12	ENST00000501748.3	6759	1	238	-1	238	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGACTTTGTTCCTTTTT	NA	False	NA	15	True	AATAAA	-22	NA	143649897	143656419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143649900_143656400
WTC11_00084406	chr8	+	3470	10	NIC	ENSG00000181085.15	novel	1871	14	NA	NA	970	0	intron_retention	FALSE	canonical	2	9	junction_4	6.0736223860962	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	143717095	False	NA	8	True	AATAAA	-18	NA	143717347	143722458	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
WTC11_00084426	chr8	+	1570	5	FSM	ENSG00000197858.11	ENST00000529638.1	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	33.0331273118365	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATAAATGAGTGTCTGT	144084082	False	NA	-15	True	NA	NA	NA	144084190	144086185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144084331_144084412_144084610_144084721_144085480_144085572_144085744_144085881
WTC11_00084431	chr8	+	1191	7	FSM	ENSG00000179091.5	ENST00000318911.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_3	145.057938616111	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	144069250	True	NA	14	True	AATAAA	-18	NA	144095075	144097525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144095229_144095832_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
WTC11_00084435	chr8	+	1805	7	FSM	ENSG00000179632.10	ENST00000534585.5	1754	7	-51	0	0	0	multi-exon	FALSE	canonical	3	754	junction_5	67.9249994888153	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	144084624	True	NA	22	True	AATAAA	-16	NA	144104460	144107611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106675_144106834_144106964_144107087
WTC11_00084439	chr8	+	1732	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	-20	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	19.5904345017394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	144145310	True	NA	6	True	AATAAA	-17	NA	144148015	144213467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
WTC11_00084443	chr8	+	5234	43	FSM	ENSG00000179832.18	ENST00000528919.5	5234	43	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_23	14.4332068618675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGACTGACAGGGTGCG	NA	False	NA	3	True	AATAAA	-16	NA	144161024	144261927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
WTC11_00084447	chr8	+	2203	14	NIC	ENSG00000185122.11	novel	2105	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	78	junction_13	297.762206065422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCTATGGCCTCCATGT	144279577	True	NA	29	True	TATAAA	-11	NA	144291604	144314714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313845_144313912_144313984_144314055_144314132
WTC11_00084448	chr8	+	2236	14	NIC	ENSG00000185122.11	novel	2105	13	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_9	244.772252555925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATGGACGGACAAGACA	144279506	True	NA	-17	True	NA	NA	NA	144291533	144314668	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313845_144313912_144313984_144314055_144314124
WTC11_00084449	chr8	+	2108	13	NIC	ENSG00000185122.11	novel	2134	13	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	217.163340982466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCTATGGCCTCCATGT	144279588	True	NA	29	True	TATAAA	-11	NA	144291615	144314714	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314132
WTC11_00084450	chr8	+	3451	10	FSM	ENSG00000185122.11	ENST00000532338.5	3451	10	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_6	92.8373062518445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCCTCCATGTGTTTC	144309008	False	NA	34	True	TATAAA	-16	NA	144309033	144314719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144309592_144309771_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
WTC11_00084459	chr8	+	2049	5	FSM	ENSG00000185803.12	ENST00000527078.6	2041	5	-8	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	234.353765704757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356181	True	NA	28	True	AATAAA	-15	NA	144358556	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144358901_144359183_144359424_144359622_144360494_144360589_144360714_144360802
WTC11_00084462	chr8	+	2294	4	FSM	ENSG00000185803.12	ENST00000533662.2	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	30.9443945740671	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356219	True	NA	28	True	AATAAA	-15	NA	144358594	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359424_144359622_144360494_144360589_144360714_144360802
WTC11_00084463	chr8	+	2172	5	FSM	ENSG00000185803.12	ENST00000534725.6	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	226.182448479098	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356219	True	NA	28	True	AATAAA	-15	NA	144358594	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359187_144359424_144359622_144360494_144360589_144360714_144360802
WTC11_00084464	chr8	+	1684	5	FSM	ENSG00000185803.12	ENST00000675597.1	1673	5	-11	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	224.401843798129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356219	True	NA	28	True	AATAAA	-15	NA	144358594	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359183_144359424_144360114_144360494_144360589_144360714_144360802
WTC11_00084465	chr8	+	1751	5	FSM	ENSG00000185803.12	ENST00000675121.1	1740	5	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	240.37717757724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356237	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144358659_144359183_144359424_144359622_144360494_144360589_144360714_144360802
WTC11_00084466	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	55.2827956963104	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356237	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
WTC11_00084469	chr8	+	1690	4	FSM	ENSG00000185803.12	ENST00000675787.1	1690	4	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	247.52508290407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144359170	False	NA	28	True	AATAAA	-15	NA	144359187	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359424_144359622_144360494_144360600_144360714_144360802
WTC11_00084470	chr8	+	1982	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	-22	0	-17	0	multi-exon	TRUE	canonical	3	33	junction_4	10.8984177844347	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373044	True	NA	NA	False	NA	NA	NA	144374024	144393242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
WTC11_00084472	chr8	+	2693	9	NIC	ENSG00000173137.12	novel	2027	14	NA	NA	15804	-1	intron_retention	FALSE	canonical	3	44	junction_3	7.69638713943107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTCCTTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	144389879	144393241	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392893_144392968
WTC11_00084483	chr8	+	825	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	-18	0	-18	0	multi-exon	TRUE	canonical	3	119	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144500470	True	NA	18	True	GATAAA	-18	NA	144501070	144502120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144501295_144501519
WTC11_00084488	chr8	+	3523	5	NIC	ENSG00000160959.8	novel	5337	4	NA	NA	0	-631	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	78.7539681539921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTGCTCCTTAAGTC	144516618	True	NA	NA	False	NA	NA	NA	144517991	144523660	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910_144523334_144523635
WTC11_00084491	chr8	+	730	2	FSM	ENSG00000160959.8	ENST00000530854.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCCTGGGGCTGACTG	144516997	False	NA	NA	False	NA	NA	NA	144518370	144519985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144518816_144519700
WTC11_00084494	chr8	+	1915	4	NIC	ENSG00000160959.8	novel	1408	3	NA	NA	102	-3	intron_retention	FALSE	canonical	3	24	junction_2	18.263503375737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAAAACATTTTCTTAA	144522189	False	NA	32	True	AATAAA	-20	NA	144522683	144525169	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144523334_144523635_144523810_144523923_144524106_144524260
WTC11_00084498	chr8	+	2122	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	3	0	3	0	multi-exon	FALSE	canonical	3	6	junction_2	36.8510515453766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	144824843	True	NA	22	True	AATAAA	-19	NA	144827520	144843222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
WTC11_00084499	chr8	+	2985	5	FSM	ENSG00000147789.16	ENST00000446747.7	2794	5	-4	-187	0	187	multi-exon	FALSE	canonical	3	12	junction_2	31.5386667441729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCCCCTTCCTCAGAG	144824877	True	NA	NA	False	NA	NA	NA	144827554	144843959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144841354
WTC11_00084501	chr8	+	2026	3	NIC	ENSG00000147789.16	novel	2125	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	144824891	True	NA	22	True	AATAAA	-19	NA	144827568	144843222	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144827610_144837390_144837508_144841354
WTC11_00084503	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_2	190.129561089274	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
WTC11_00084505	chr8	-	529	1	FSM	ENSG00000223508.5	ENST00000521854.1	457	1	68	-140	68	75	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGCTTATTTGACTAGA	NA	False	NA	NA	False	NA	NA	NA	213639	213110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_213100_213600
WTC11_00084506	chr8	-	4144	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	-3520	6	-3520	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGTGACATCATTTTT	NA	False	NA	-6	True	AATAAA	-22	NA	454863	450719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_450700_454900
WTC11_00084507	chr8	-	512	3	NNC	ENSG00000180190.13	novel	2622	5	NA	NA	-38	32887	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	251	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACCCGTGCCTTGACAC	-536439	True	NA	NA	False	NA	NA	NA	544872	456915	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_457101_494493_494598_544649
WTC11_00084508	chr8	-	4122	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	-1034	0	891	multi-exon	FALSE	canonical	3	492	junction_1	28	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTGTAAAAAAAAAAAAAAA	-536401	True	NA	NA	False	NA	NA	NA	544834	488911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_492745_494493_494598_544649
WTC11_00084509	chr8	-	6842	4	NNC	ENSG00000180190.13	novel	3088	3	NA	NA	-38	891	intron_retention	FALSE	canonical	2	11	junction_3	226.275643114027	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTGTAAAAAAAAAAAAAAA	-536439	True	NA	NA	False	NA	NA	NA	544872	488911	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_492745_494493_494598_528894_531577_544649
WTC11_00084510	chr8	-	2482	4	ISM	ENSG00000180190.13	ENST00000523656.5	2622	5	959	-51	12	51	3prime_fragment	FALSE	canonical	3	45	junction_1	225.081219908627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTTGGTGCAGGGCC	-536389	True	NA	38	True	NA	NA	NA	544822	489751	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_491671_492458_492745_494493_494598_544649
WTC11_00084512	chr8	-	3630	4	FSM	ENSG00000104714.14	ENST00000523415.5	3630	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	120.444546945426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAGTGAATGGAAAAC	-673300	False	NA	-15	True	AATAAA	-14	NA	673326	614748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_616582_625674_627239_668597_668793_673288
WTC11_00084513	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	52.7658980782096	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726155	True	NA	NA	False	ATTAAA	-18	NA	731224	664199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
WTC11_00084514	chr8	-	735	2	FSM	ENSG00000104714.14	ENST00000523053.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGAGCAGTGACTAAA	-669251	False	NA	NA	False	NA	NA	NA	669277	664621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_664677_668597
WTC11_00084515	chr8	-	3193	2	FSM	ENSG00000104714.14	ENST00000522893.1	3170	2	0	-23	0	23	multi-exon	FALSE	canonical	3	257	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATGCAGACTTGGCC	-673631	False	NA	NA	False	AATAAA	-41	NA	673657	665968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_668793_673288
WTC11_00084517	chr8	-	1797	2	FSM	ENSG00000253982.3	ENST00000665209.2	2199	2	77	325	64	-121	multi-exon	FALSE	canonical	3	99	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGCAACAG	-1763257	False	NA	NA	False	NA	NA	NA	1763269	1761378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1762929_1763022
WTC11_00084518	chr8	-	1625	2	FSM	ENSG00000253982.3	ENST00000659375.1	1940	2	0	315	0	-121	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGCAACAG	-1764496	True	NA	NA	False	NA	NA	NA	1764508	1761378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1762929_1764433
WTC11_00084519	chr8	-	2402	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	11	0	-11	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAACAAAATGTGTTGGG	-6405515	True	NA	NA	False	AATAAA	-14	NA	6406548	6403561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6405121_6405705
WTC11_00084520	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6405509	True	NA	-3	True	AATAAA	-15	NA	6406542	6405405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6405400_6406500
WTC11_00084521	chr8	-	311	1	FSM	ENSG00000254683.1	ENST00000528310.1	210	1	-106	5	-106	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGGATAGAGGGGAGGC	-7143937	False	NA	NA	False	NA	NA	NA	7143947	7143636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7143600_7143900
WTC11_00084522	chr8	-	245	1	FSM	ENSG00000284698.1	ENST00000641598.1	221	1	-24	0	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	7686667	7686422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7686400_7686700
WTC11_00084523	chr8	-	1420	2	Antisense	novelGene_ENSG00000244427.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCAGGGCTTGGCCAAG	NA	False	NA	NA	False	NA	NA	NA	8097131	8066236	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_-_8067642_8097116
WTC11_00084524	chr8	-	4863	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	-18	0	18	multi-exon	FALSE	canonical	2	9	junction_1	4.19523539268061	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCCTGAGTGTATTAAT	-8385987	True	NA	-2	True	ATTAAA	-41	NA	8386439	8317717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
WTC11_00084525	chr8	-	6415	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	-16	0	16	multi-exon	FALSE	canonical	3	41	junction_1	8.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATTATTTCAGATTTT	-8891856	True	NA	-4	True	AATAAA	-37	NA	8893630	8783337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8786056_8797364_8797492_8890060
WTC11_00084527	chr8	-	5516	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTCTATTCTTAGAG	-9148777	False	1881	NA	False	AATAAA	-23	NA	9150658	9136248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9141669_9150562
WTC11_00084528	chr8	-	5696	2	NNC	ENSG00000173281.5	novel	5510	2	NA	NA	-44	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTCCTTCTATTCTT	-9149737	True	NA	NA	False	AATAAA	-19	NA	9151618	9136252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9141676_9151345
WTC11_00084529	chr8	-	1820	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-931	26871	intron_retention	FALSE	canonical	3	84	junction_1	107	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAGAACAGTTTATG	-9180781	True	NA	NA	False	AATAAA	-42	NA	9183450	9153379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9155059_9182463_9182516_9183361
WTC11_00084530	chr8	-	3345	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-881	11201	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	122.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTGGGGAATGTCGGT	-9180731	True	NA	NA	False	TTTAAA	-9	NA	9183400	9169049	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9172304_9182463_9182516_9183361
WTC11_00084531	chr8	-	1110	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACACTAAGCCTTTGT	-9178244	False	NA	-28	True	NA	NA	NA	9178283	9177173	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_9177200_9178300
WTC11_00084535	chr8	-	1376	1	FSM	ENSG00000272267.2	ENST00000607598.2	1377	1	-4	5	-4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCTGCTCTCTCTGAAA	-9556502	False	NA	NA	False	ATTAAA	-18	NA	9556524	9555148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9555100_9556500
WTC11_00084536	chr8	-	3570	2	FSM	ENSG00000253230.10	ENST00000654192.1	3252	2	1	-319	0	119	multi-exon	FALSE	canonical	3	164	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAATAGGTTCATCTT	-9903355	False	NA	-6	True	AATAAA	-11	NA	9903397	9899751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900613_9900688
WTC11_00084537	chr8	-	3302	3	FSM	ENSG00000253230.10	ENST00000667251.1	3111	3	1	-192	0	119	multi-exon	FALSE	canonical	3	131	junction_1	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAATAGGTTCATCTT	-9903355	False	NA	-6	True	AATAAA	-11	NA	9903397	9899751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900554_9900613_9900688
WTC11_00084539	chr8	-	3260	2	FSM	ENSG00000253230.10	ENST00000667273.1	3260	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGGAATGATCTTCCAG	-9903356	False	NA	NA	False	NA	NA	NA	9903398	9899870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900554
WTC11_00084540	chr8	-	3340	1	FSM	ENSG00000253230.10	ENST00000517675.1	3334	1	0	-6	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAATTCTTTCATTGGG	-9903355	False	NA	-14	True	AATAAA	-22	NA	9903397	9900057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900100_9903400
WTC11_00084541	chr8	-	2854	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	1	-1583	0	1385	multi-exon	FALSE	canonical	3	42	junction_1	77.7395652161755	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCCTTTTGTTTTAA	-10833492	True	NA	NA	False	AATAAA	-21	NA	10839875	10763575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
WTC11_00084542	chr8	-	1556	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	-10	0	10	multi-exon	FALSE	canonical	3	175	junction_2	27.697272228306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTCTTTTTGTTCTA	-10833492	True	NA	4	True	ATTAAA	-27	NA	10839875	10764950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
WTC11_00084545	chr8	-	3448	1	FSM	ENSG00000280294.1	ENST00000624866.1	3352	1	-163	67	-163	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCATTTTAATACATTA	NA	False	NA	-68	True	AAAAAG	-42	NA	10859599	10856151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10856200_10859600
WTC11_00084546	chr8	-	5325	3	FSM	ENSG00000171044.11	ENST00000416569.3	4327	3	-839	-159	-839	159	multi-exon	FALSE	canonical	1	4	junction_2	3.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTCCTTCCCACCACC	NA	False	NA	NA	False	AATAAA	-21	NA	11202672	10895885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10898917_10924633_10924831_11200575
WTC11_00084547	chr8	-	1939	1	FSM	ENSG00000255310.2	ENST00000530248.2	1939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGTCTGTTGCGGAT	-11109714	False	NA	NA	False	AATACA	-17	NA	11109726	11107787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11107800_11109700
WTC11_00084548	chr8	-	3175	3	FSM	ENSG00000171044.11	ENST00000529336.1	728	3	-1838	-609	-839	609	multi-exon	FALSE	canonical	3	22	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11202672	11111035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11111893_11113871_11114093_11200575
WTC11_00084549	chr8	-	1698	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	0	614	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	2.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11201316	False	NA	NA	False	ACTAAA	-3	NA	11201339	11111030	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_11111893_11114020_11114093_11200575
WTC11_00084550	chr8	-	4122	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	-53	-2	-53	2	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAATGCTTGTCCTT	-11466776	True	NA	NA	False	AATAAA	-39	NA	11466806	11421473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11424637_11444030_11444809_11466625
WTC11_00084551	chr8	-	3736	10	FSM	ENSG00000164733.22	ENST00000353047.11	3733	10	0	-3	0	3	multi-exon	TRUE	canonical	3	395	junction_3	32.438355593036	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATTCATTCCATGCGC	-11862814	True	NA	0	True	AATAAA	-22	NA	11868087	11842520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
WTC11_00084552	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	177.235323792973	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	-11862864	True	NA	-39	True	NA	NA	NA	11868137	11842559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
WTC11_00084553	chr8	-	3128	9	FSM	ENSG00000164733.22	ENST00000677047.1	3128	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	149.381851307312	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTGCAGTGAGCCAAGA	-11862863	True	NA	NA	False	NA	NA	NA	11868136	11843033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
WTC11_00084559	chr8	-	335	1	FSM	ENSG00000254507.2	ENST00000532329.1	154	1	81	-262	81	108	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGCTTGGGCAAATT	NA	False	NA	NA	False	NA	NA	NA	12003626	12003291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12003300_12003600
WTC11_00084560	chr8	-	3091	2	FSM	ENSG00000284610.1	ENST00000641966.1	3141	2	0	50	0	-50	multi-exon	FALSE	canonical	3	14	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGGAACAATATATGTG	NA	False	NA	NA	False	AGTAAA	-34	NA	12015193	12006237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12008966_12014830
WTC11_00084561	chr8	-	2145	6	FSM	ENSG00000186523.15	ENST00000340537.9	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	11.499565209172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACAGATGATCTGTGG	-12194069	True	NA	NA	False	AATAAA	-29	NA	12194082	12182097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
WTC11_00084562	chr8	-	2268	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	-14	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.1223227551278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	-12194092	True	NA	NA	False	AATAAA	-31	NA	12194105	12182095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
WTC11_00084563	chr8	-	581	5	FSM	ENSG00000186523.15	ENST00000534520.5	808	5	0	227	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9.54921462739214	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACCCCCACGCCCACCC	-12194114	True	NA	NA	False	NA	NA	NA	12194127	12185375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
WTC11_00084564	chr8	-	806	6	NIC	ENSG00000145002.13	novel	953	7	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	12.1424873893284	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAACTGCCCTCTAAT	-12436280	False	NA	NA	False	ATTAAA	-13	NA	12436298	12425760	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12425990_12427656_12427807_12428980_12429115_12432081_12432163_12434051_12434115_12436149
WTC11_00084565	chr8	-	447	5	ISM	ENSG00000145002.13	ENST00000687060.1	2158	6	57	3321	0	-1973	5prime_fragment	FALSE	canonical	3	17	junction_2	10.4253297309965	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCGGGCTCCTGAGGTCT	-12436325	False	NA	NA	False	NA	NA	NA	12436343	12427733	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_12427807_12428980_12429115_12432081_12432163_12434051_12434115_12436247
WTC11_00084566	chr8	-	1995	1	FSM	ENSG00000242607.1	ENST00000483613.1	781	1	-1244	30	-1244	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAACCACCAGTCCAAGA	NA	False	NA	NA	False	NA	NA	NA	12572374	12570379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12570400_12572400
WTC11_00084567	chr8	-	219	1	FSM	ENSG00000284746.1	ENST00000641210.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCCGG	-12601363	False	NA	NA	False	NA	NA	NA	12601376	12601157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12601200_12601400
WTC11_00084569	chr8	-	219	1	FSM	ENSG00000284663.1	ENST00000641239.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGCGGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	12607509	12607290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12607300_12607500
WTC11_00084570	chr8	-	701	2	FSM	ENSG00000283674.3	ENST00000636990.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTCCTGGCTGCA	-12658991	False	NA	0	True	TATAAA	-22	NA	12659651	12626391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12626571_12659129
WTC11_00084572	chr8	-	3731	12	NIC	ENSG00000154359.13	novel	3618	12	NA	NA	-134	12	combination_of_known_junctions	FALSE	canonical	3	137	junction_7	38.9831495702082	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGGTCAGTGTTATAAA	NA	False	NA	3	True	AATAAA	-29	NA	12755660	12721893	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
WTC11_00084573	chr8	-	3630	12	FSM	ENSG00000154359.13	ENST00000398246.8	3618	12	0	-12	0	12	multi-exon	FALSE	canonical	3	114	junction_7	44.9188432546837	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGGTCAGTGTTATAAA	-12754388	True	NA	3	True	AATAAA	-29	NA	12755526	12721893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736798_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
WTC11_00084578	chr8	-	450	2	FSM	ENSG00000164741.15	ENST00000521730.1	485	2	35	0	35	0	multi-exon	FALSE	canonical	3	16	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCTAATGCAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	13088704	13086231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13086464_13088486
WTC11_00084579	chr8	-	1790	4	FSM	ENSG00000164741.15	ENST00000510250.2	1925	4	135	0	135	0	multi-exon	FALSE	canonical	3	8	junction_3	2.82842712474619	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGGATTCAGGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	13100770	13094928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13094958_13095085_13095246_13098398_13098576_13099346
WTC11_00084580	chr8	-	527	4	FSM	ENSG00000164741.15	ENST00000515225.1	582	4	55	0	55	0	multi-exon	TRUE	canonical	1	1	junction_1	5.90668171555645	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGAGTTTGATGTCTTT	-13132996	False	NA	NA	False	NA	NA	NA	13133234	13100688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13100771_13110741_13110824_13115585_13115658_13132943
WTC11_00084581	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	100.045684009301	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	-17238342	True	NA	-33	True	AATAAA	-18	NA	17246857	17224965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
WTC11_00084582	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_3	102.868070848053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-17238363	True	NA	0	True	ATTAAA	-17	NA	17246878	17231569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
WTC11_00084588	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	3.8829013735766	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	-17412488	True	NA	-20	True	AATAAA	-19	NA	17413351	17296793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
WTC11_00084589	chr8	-	3082	13	FSM	ENSG00000003987.14	ENST00000521857.5	2158	13	0	-924	0	924	multi-exon	FALSE	canonical	3	17	junction_7	4.03026742978125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATGACAGTGTTTTAT	-17412464	True	NA	NA	False	NA	NA	NA	17413327	17300726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
WTC11_00084590	chr8	-	6191	15	FSM	ENSG00000129422.15	ENST00000693296.1	6125	15	-66	0	-66	0	multi-exon	FALSE	canonical	3	12	junction_10	5.67486401886892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCATCCTCTGACCTA	-17801009	False	NA	-7	True	AATAAA	-19	NA	17801160	17643801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17723671_17723834_17743603_17743800_17753716_17755962_17801060
WTC11_00084592	chr8	-	5010	13	FSM	ENSG00000104763.20	ENST00000637609.1	4981	13	14	-43	0	12	multi-exon	FALSE	canonical	3	340	junction_4	287.82617970265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATCTGTGTTGGTTTG	-18076426	True	NA	-3	True	NA	NA	NA	18084077	18056418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00084593	chr8	-	2173	12	FSM	ENSG00000104763.20	ENST00000636701.1	2158	12	0	-15	0	0	multi-exon	FALSE	canonical	1	1	junction_10	208.29972841918	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	-18076491	True	NA	-39	True	AATAAA	-14	NA	18084142	18056454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18075540_18075588_18083980
WTC11_00084594	chr8	-	2567	14	FSM	ENSG00000104763.20	ENST00000636050.1	2546	14	0	-21	0	0	multi-exon	FALSE	canonical	1	4	junction_13	292.486463551643	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-18084813	True	NA	-36	True	AATAAA	-17	NA	18084961	18056451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084586
WTC11_00084595	chr8	-	2536	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	-24	0	0	multi-exon	FALSE	canonical	3	12	junction_13	291.475779744244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGGTGTGTACATC	-18084850	False	NA	-15	True	AATAAA	-38	NA	18084998	18056430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
WTC11_00084598	chr8	-	3156	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	0	-5	0	0	multi-exon	FALSE	canonical	3	340	junction_4	281.402699507202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCCTGACACTCAATAAA	-18084832	True	NA	-72	True	NA	NA	NA	18084980	18056487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00084604	chr8	-	4611	5	FSM	ENSG00000104763.20	ENST00000636435.1	4611	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	29.5338788512447	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGTGAAACCCCGTCT	-18076491	True	NA	NA	False	NA	NA	NA	18084142	18063074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00084607	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	426.728470458675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076422	True	NA	-3	True	AATAAA	-24	NA	18084073	18066762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
WTC11_00084608	chr8	-	820	1	FSM	ENSG00000104763.20	ENST00000637840.1	825	1	9	-4	9	4	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTTACTCAATATATTTGA	-18076525	False	NA	NA	False	CATAAA	-29	NA	18076673	18075853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18075900_18076700
WTC11_00084609	chr8	-	202	1	FSM	ENSG00000253384.1	ENST00000517431.1	1119	1	195	722	195	-722	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAGTAAAGGATGTAAAC	NA	False	NA	NA	False	ATTAAA	-45	NA	18089492	18089290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18089300_18089500
WTC11_00084610	chr8	-	11704	16	FSM	ENSG00000156011.18	ENST00000327040.13	11704	16	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	3.36386021641143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGGAATGTTTTTATT	-19011483	True	NA	-2	True	AATAAA	-19	NA	19013703	18527302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18535959_18556208_18556353_18572527_18572673_18575127_18575286_18600363_18600435_18632612_18632807_18655641_18655686_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
WTC11_00084612	chr8	-	554	3	FSM	ENSG00000147408.15	ENST00000524213.5	554	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTTTTGCTGGTGCTC	-19757290	True	NA	NA	False	GGGGCT	-21	NA	19757305	19505791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_19506131_19601770_19601866_19757185
WTC11_00084613	chr8	-	5701	4	FSM	ENSG00000061337.15	ENST00000381569.5	5706	4	0	5	0	-5	multi-exon	FALSE	canonical	3	14	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGAGCCACGTGTATCT	-20303535	True	NA	-6	True	AATAAA	-20	NA	20303963	20246169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_20250364_20252781_20253586_20254836_20255316_20303739
WTC11_00084614	chr8	-	1519	3	FSM	ENSG00000275074.2	ENST00000611621.2	1513	3	0	-6	0	2	multi-exon	TRUE	canonical	3	11	junction_1	3	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGCCTACACGTCTCT	-22109016	True	NA	-8	True	AGTAAA	-20	NA	22109419	22106871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22107896_22108132_22108347_22109138
WTC11_00084615	chr8	-	1908	2	FSM	ENSG00000275074.2	ENST00000613958.1	1754	2	-152	-2	-152	2	multi-exon	FALSE	canonical	3	17	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGCCTACACGTCTCT	NA	False	NA	-8	True	AGTAAA	-20	NA	22109571	22106871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22108347_22109138
WTC11_00084616	chr8	-	1667	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	-1	0	1	multi-exon	FALSE	canonical	3	360	junction_6	14.5447935842405	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTCCTGATTCTTAC	-22135994	True	NA	-18	True	AATAAA	-15	NA	22141907	22138018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
WTC11_00084617	chr8	-	1569	7	FSM	ENSG00000168476.12	ENST00000334530.9	1476	7	-93	0	5	0	multi-exon	FALSE	canonical	2	12	junction_2	137.255742644484	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22136033	True	NA	-19	True	AATAAA	-14	NA	22141946	22138019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22138553_22138638_22138794_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
WTC11_00084618	chr8	-	1216	5	FSM	ENSG00000168476.12	ENST00000519074.5	1212	5	0	-4	0	0	multi-exon	FALSE	canonical	3	360	junction_3	11.1214882097676	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCAGGAGGGATGGC	-22135855	False	NA	NA	False	NA	NA	NA	22141768	22138902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
WTC11_00084620	chr8	-	2974	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	2	0	-1	multi-exon	FALSE	canonical	3	11	junction_4	3	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGCTGCTGTAACAA	-22231513	True	NA	-1	True	AATAAA	-35	NA	22232099	22219704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
WTC11_00084621	chr8	-	429	1	FSM	ENSG00000208037.1	ENST00000385302.1	82	1	17	-364	17	364	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAACAGCCGCAGTGG	-22244794	True	NA	NA	False	NA	NA	NA	22245026	22244597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22244600_22245000
WTC11_00084622	chr8	-	2365	1	FSM	ENSG00000253200.1	ENST00000521025.1	2750	1	915	-530	915	530	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	-22615731	False	NA	NA	False	AATAAA	-37	NA	22615742	22613377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22613400_22615700
WTC11_00084624	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	8.7740740252177	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-22666522	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
WTC11_00084630	chr8	-	3328	4	FSM	ENSG00000120889.13	ENST00000523752.5	3328	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	4.54606056566195	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-23027950	False	NA	NA	False	ATTAAA	-21	NA	23027968	23020132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721
WTC11_00084631	chr8	-	2085	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	-362	0	362	multi-exon	FALSE	canonical	3	211	junction_5	69.8030739710112	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTTTATGAACATG	-23061005	True	NA	NA	False	NA	NA	NA	23069021	23021948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
WTC11_00084632	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	21.9512955198549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-23061015	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
WTC11_00084633	chr8	-	1464	9	FSM	ENSG00000120889.13	ENST00000523504.5	1464	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	146.859999233964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGATAATAAGGACACT	-23061015	True	NA	-58	True	NA	NA	NA	23069031	23022473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23068750
WTC11_00084636	chr8	-	3536	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	-1	0	1	multi-exon	FALSE	canonical	3	109	junction_3	16.1380760935125	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTTCGTTTATTTC	-23161665	True	NA	NA	False	AATAAA	-23	NA	23164027	23135586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
WTC11_00084637	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.24264068711928	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	-23223443	True	NA	99	True	NA	NA	NA	23225102	23190451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
WTC11_00084638	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_11	38.4795342515085	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23296896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
WTC11_00084639	chr8	-	620	4	FSM	ENSG00000134013.16	ENST00000520349.1	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	89.566858950296	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGCCCCGGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	23333495	23319884	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23320053_23322129_23322282_23328381_23328587_23333400
WTC11_00084640	chr8	-	572	3	FSM	ENSG00000134013.16	ENST00000520925.1	965	3	0	393	0	-393	multi-exon	FALSE	canonical	3	203	junction_2	8	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGGACTGGACACCTA	NA	False	NA	NA	False	NA	NA	NA	23333636	23322129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23322282_23328381_23328566_23333400
WTC11_00084643	chr8	-	5793	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	56	-3786	0	22	multi-exon	FALSE	canonical	3	133	junction_5	36.4793510846281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTTGTCATCTTTGA	-23453988	True	NA	12	True	AATAAA	-42	NA	23457639	23429139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
WTC11_00084644	chr8	-	6215	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	-48	-364	0	364	multi-exon	FALSE	canonical	3	85	junction_5	46.5983875495947	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATAGTAACAGCAAATG	-23454044	True	NA	NA	False	AATAAA	-20	NA	23457695	23428797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
WTC11_00084649	chr8	-	3273	2	FSM	ENSG00000167034.10	ENST00000380871.5	3278	2	3	2	3	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATGTGTGTGTGATTT	-23682617	True	NA	-5	True	AATAAA	-19	NA	23682935	23678698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23681640_23682603
WTC11_00084650	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	10.2089285540757	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	-23854412	True	NA	-14	True	AATAAA	-14	NA	23854806	23841928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
WTC11_00084651	chr8	-	2553	1	FSM	ENSG00000272163.1	ENST00000607058.1	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGACTTCTTGCTGTC	-24913786	False	NA	-7	True	ATTAAA	-24	NA	24914717	24912164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_24912200_24914700
WTC11_00084652	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	54.6158300210561	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-24952531	True	NA	-3	True	AATAAA	-18	NA	24956612	24950954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
WTC11_00084653	chr8	-	1875	1	FSM	ENSG00000277586.4	ENST00000615973.1	1497	1	-393	15	-393	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCCTTGTTGGGTG	NA	False	NA	NA	False	ATTAAA	-3	NA	24957114	24955239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_24955200_24957100
WTC11_00084654	chr8	-	2425	3	FSM	ENSG00000147437.10	ENST00000276414.4	1760	3	-669	4	-669	-4	multi-exon	FALSE	canonical	3	19	junction_2	1	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAAGTGGCATACCTG	NA	False	NA	NA	False	AATAAA	-12	NA	25425323	25419265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25419461_25421572_25421669_25423189
WTC11_00084655	chr8	-	3365	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	2	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	10.816271794717	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-25457772	True	NA	-4	True	ATTAAA	-20	NA	25458431	25427846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
WTC11_00084656	chr8	-	530	6	FSM	ENSG00000104756.16	ENST00000522493.5	530	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	24.2783854487896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCAAGTCAGAACTGCG	-25457647	False	NA	NA	False	NA	NA	NA	25458306	25436261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25458198
WTC11_00084659	chr8	-	5148	16	FSM	ENSG00000221818.9	ENST00000520164.6	5166	16	6	12	6	-12	multi-exon	FALSE	canonical	2	12	junction_15	3.97994974842648	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTGTAAAAATGAGTGGA	-26044618	True	NA	NA	False	AATAAA	-7	NA	26045407	25841736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25844641_25850593_25850762_25858318_25858505_25861048_25861227_25861308_25861375_25862708_25862798_25886754_25886882_25887841_25887973_25889751_25889870_25908473_25908556_26033084_26033154_26040027_26040102_26040615_26040672_26040938_26041003_26042094_26042252_26044728
WTC11_00084660	chr8	-	4739	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	-9	0	9	multi-exon	TRUE	canonical	3	31	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTCCTATATCGTG	-26513098	True	NA	-12	True	AATAAA	-25	NA	26513872	26504691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26509244_26509547_26509678_26513815
WTC11_00084661	chr8	-	576	3	FSM	ENSG00000240694.9	ENST00000521740.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCACCACTAACAAATTG	-26513109	True	NA	NA	False	NA	NA	NA	26513883	26508812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26509244_26509600_26509678_26513815
WTC11_00084663	chr8	-	1053	1	FSM	ENSG00000253899.1	ENST00000517322.1	1283	1	148	82	148	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTAGTAATTGCTTATT	NA	False	NA	NA	False	TTTAAA	-37	NA	27065130	27064077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27064100_27065100
WTC11_00084664	chr8	-	7936	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	0	-3753	0	3753	multi-exon	TRUE	canonical	3	50	junction_3	9.3936148526539	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGCCACTCACTCCT	-27310077	True	NA	NA	False	NA	NA	NA	27311272	27281132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
WTC11_00084666	chr8	-	2689	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	60	0	-60	multi-exon	TRUE	canonical	3	1088	junction_4	105.03087343729	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAATTGTAAAGTATAT	-27614077	True	NA	NA	False	NA	NA	NA	27614700	27596976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
WTC11_00084671	chr8	-	3631	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	-4	0	4	multi-exon	FALSE	canonical	3	382	junction_6	36.5684290064531	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGAGAGAGATTTCAC	-27764868	True	NA	-1	True	AATAAA	-25	NA	27772640	27733311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
WTC11_00084672	chr8	-	3590	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	2	-6	2	4	multi-exon	FALSE	canonical	3	96	junction_5	127.942908186042	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGAGAGAGATTTCAC	-27764879	True	NA	-1	True	AATAAA	-25	NA	27772651	27733311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
WTC11_00084673	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	189.310517991532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-27764867	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
WTC11_00084678	chr8	-	1839	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	-3	0	3	multi-exon	FALSE	canonical	3	109	junction_2	12.0678354753959	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTCAGCATTATTTTA	-27836993	True	NA	-21	True	AATAAA	-21	NA	27837817	27809620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
WTC11_00084679	chr8	-	4899	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	-135	-2974	-70	5	multi-exon	FALSE	canonical	3	33	junction_9	15.3341384651742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCCTTTGCCC	-28386157	False	NA	0	True	AATAAA	-22	NA	28386208	28345584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
WTC11_00084681	chr8	-	702	4	FSM	ENSG00000186918.14	ENST00000521912.1	699	4	-3	0	-3	0	multi-exon	FALSE	canonical	2	7	junction_3	33.5360502544153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAGGCCAACTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	28375382	28356689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28356780_28359591_28359825_28360884_28361143_28375261
WTC11_00084683	chr8	-	1326	8	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	4	49	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	8.36172035809251	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATGGGACATATGATG	-28489236	True	NA	28	True	NA	NA	NA	28490274	28428358	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
WTC11_00084684	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	22.300971578237	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	-28489240	True	NA	-61	True	NA	NA	NA	28490278	28428447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
WTC11_00084685	chr8	-	397	3	FSM	ENSG00000214050.8	ENST00000519471.2	398	3	0	1	0	-1	multi-exon	FALSE	canonical	3	6	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATTTGTTGACATTTTG	-28482424	False	NA	-3	True	AATAAA	-20	NA	28483462	28465199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28465446_28473771_28473808_28483347
WTC11_00084686	chr8	-	937	3	FSM	ENSG00000104299.15	ENST00000517383.1	686	3	0	-251	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28771054	False	NA	-5	True	AATAAA	-18	NA	28771064	28767660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28768377_28769888_28770027_28770981
WTC11_00084687	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_3	15.6599608875629	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887292	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
WTC11_00084693	chr8	-	4805	8	NIC	ENSG00000197892.13	novel	8743	40	NA	NA	-5364	-3	intron_retention	FALSE	canonical	3	12	junction_1	4.07080195679286	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCATGTCTGAGGCCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	29113556	29067280	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_29070767_29071619_29072317_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462
WTC11_00084694	chr8	-	1267	5	FSM	ENSG00000197892.13	ENST00000523130.1	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.54835134966506	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCGAACTTTTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	29108192	29070493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_29070767_29071619_29072317_29092744_29092879_29099132_29099242_29108138
WTC11_00084695	chr8	-	5553	4	FSM	ENSG00000120875.9	ENST00000240100.7	5553	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	3.77123616632825	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTTGGTTAGACCT	-29350207	True	NA	-1	True	AATAAA	-15	NA	29350684	29333063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_29337412_29338281_29338502_29340097_29340244_29349845
WTC11_00084696	chr8	-	1951	7	NNC	ENSG00000133872.14	novel	2020	6	NA	NA	0	15995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.400343803512	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGATTGAGAGAGA	-30073304	True	NA	NA	False	NA	NA	NA	30083064	30047007	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30047035_30063098_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
WTC11_00084697	chr8	-	1832	6	NNC	ENSG00000133872.14	novel	1981	6	NA	NA	0	15995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	346.615291064892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGATTGAGAGAGA	-30083091	False	NA	NA	False	NA	NA	NA	30083124	30047007	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30047035_30063098_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
WTC11_00084698	chr8	-	1967	6	FSM	ENSG00000133872.14	ENST00000256255.11	2020	6	0	53	0	42	multi-exon	FALSE	canonical	3	544	junction_5	102.78248878092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTTTGTTTTTTTAAA	-30073304	True	NA	-17	True	AATAAA	-3	NA	30083064	30063055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
WTC11_00084699	chr8	-	1915	5	FSM	ENSG00000133872.14	ENST00000545648.2	1976	5	1	60	1	26	multi-exon	FALSE	canonical	3	197	junction_4	259.908036620648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCGCAAATAAATGTTAC	-30083174	False	NA	7	True	AATAAA	-39	NA	30083207	30063071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
WTC11_00084700	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	300.864487768164	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	-30083091	False	NA	-19	True	AATAAA	-13	NA	30083124	30063097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
WTC11_00084703	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	NA	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30117400_30117800
WTC11_00084704	chr8	-	474	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	-75	4	-75	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTCCGCGTCATTATG	-30156104	False	NA	-6	True	AATAAA	-15	NA	30156307	30155833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30155800_30156300
WTC11_00084706	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	18.3647844017415	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-30655616	True	NA	1	True	AATAAA	-17	NA	30658236	30578317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
WTC11_00084707	chr8	-	3204	13	FSM	ENSG00000104687.14	ENST00000221130.11	3034	13	0	-170	0	170	multi-exon	FALSE	canonical	3	346	junction_11	41.016934172228	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAGAAAAGCCTAGAA	-30724060	True	NA	NA	False	AATAAA	-43	NA	30727846	30677895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30679670_30680903_30681038_30681929_30682062_30684087_30684200_30689160_30689320_30692968_30693056_30696379_30696480_30700080_30700136_30703092_30703241_30708071_30708142_30709813_30709903_30712061_30712089_30727529
WTC11_00084709	chr8	-	1948	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	-2	0	2	multi-exon	FALSE	canonical	3	326	junction_4	25.0183266160362	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTATTGTGTTGTGCA	-30806465	True	NA	NA	False	AATAAA	-23	NA	30812818	30785613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
WTC11_00084710	chr8	-	11460	11	FSM	ENSG00000133863.9	ENST00000643185.2	11476	11	16	0	16	0	multi-exon	TRUE	canonical	2	2	junction_4	5.78013840664737	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTTTTTGATTCTAAA	-30912745	True	NA	NA	False	ATTAAA	-23	NA	30912992	30831543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30833324_30836802_30838062_30839905_30839965_30842003_30849317_30858667_30858831_30859910_30860058_30867264_30867503_30874936_30875103_30887166_30887312_30898741_30898818_30912878
WTC11_00084711	chr8	-	2218	2	FSM	ENSG00000172733.12	ENST00000523392.2	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATACTTTATGCTTC	-31032688	True	NA	NA	False	AATATA	-13	NA	31033356	31030849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_31032789_31033077
WTC11_00084712	chr8	-	9408	1	FSM	ENSG00000272338.2	ENST00000606064.2	577	1	-8790	-41	-8790	41	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTGAAGACACATTTT	NA	False	NA	39	True	NA	NA	NA	33370205	33360797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33360800_33370200
WTC11_00084713	chr8	-	3848	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	12	-311	0	311	multi-exon	FALSE	canonical	3	88	junction_1	19.0705925445435	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTCCTTTTGTGAAAT	-33471487	True	NA	15	True	NA	NA	NA	33473134	33370512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
WTC11_00084715	chr8	-	2261	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	-21	-53	0	53	multi-exon	FALSE	canonical	3	111	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATATATGTATATA	-33471487	True	NA	NA	False	NA	NA	NA	33473134	33451674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33453511_33461371_33461726_33473063
WTC11_00084717	chr8	-	2469	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	47	0	-3	0	multi-exon	FALSE	canonical	3	14	junction_7	112.840505102719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	-33510833	True	NA	NA	False	NA	NA	NA	33513138	33498508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
WTC11_00084718	chr8	-	2474	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	-232	0	0	multi-exon	FALSE	canonical	3	260	junction_4	42.3936578065897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-33510804	True	NA	-5	True	AATAAA	-35	NA	33513109	33498721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
WTC11_00084719	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	80.3416175478443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-33510830	True	NA	-5	True	AATAAA	-35	NA	33513135	33498721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
WTC11_00084720	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	109.806375042618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	-33510407	False	NA	-50	True	NA	NA	NA	33512712	33499117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
WTC11_00084721	chr8	-	1726	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	28	0	-17	0	multi-exon	FALSE	canonical	3	8	junction_3	10.6144555520604	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	-33599766	True	NA	-1	True	AATAAA	-16	NA	33599995	33591329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
WTC11_00084722	chr8	-	409	1	FSM	ENSG00000188512.6	ENST00000523393.1	313	1	-25	-71	-25	71	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATGGATCTCATACAC	NA	False	NA	NA	False	NA	NA	NA	33969904	33969495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33969500_33969900
WTC11_00084723	chr8	-	588	1	FSM	ENSG00000232024.2	ENST00000411836.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGTACACATGGAGGACT	-35525753	False	NA	NA	False	NA	NA	NA	35525763	35525175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_35525200_35525800
WTC11_00084724	chr8	-	634	1	FSM	ENSG00000233170.4	ENST00000521192.2	667	1	-25	58	-25	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGAAGCCAAGAAAGT	-37747961	True	NA	NA	False	NA	NA	NA	37748029	37747395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37747400_37748000
WTC11_00084725	chr8	-	2569	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	-9	0	9	multi-exon	TRUE	canonical	3	104	junction_3	6.34209919681348	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGTCTTGTAACTGAA	-37847618	True	NA	NA	False	NA	NA	NA	37849861	37843258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
WTC11_00084726	chr8	-	6030	5	FSM	ENSG00000156675.16	ENST00000287263.8	6253	5	0	223	0	-223	multi-exon	FALSE	canonical	3	89	junction_2	10.4731800328267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCACTGGGATTTCT	-37893671	True	NA	NA	False	NA	NA	NA	37899467	37858840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37863114_37870419_37870529_37874514_37875323_37877108_37877552_37899070
WTC11_00084727	chr8	-	7962	6	FSM	ENSG00000156675.16	ENST00000330843.9	8185	6	0	223	0	-223	multi-exon	FALSE	canonical	3	17	junction_3	40.4623281584241	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCACTGGGATTTCT	-37893701	True	NA	NA	False	NA	NA	NA	37899497	37858840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37863114_37870419_37870529_37871277_37873180_37874514_37875323_37877108_37877552_37899070
WTC11_00084729	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	5.39804491356722	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-38150857	False	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
WTC11_00084730	chr8	-	924	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	-18	0	14	multi-exon	FALSE	canonical	3	576	junction_1	29.3295452099452	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTTACCTGTAATGA	-38170547	True	NA	2	True	AATAAA	-34	NA	38176493	38163320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
WTC11_00084731	chr8	-	989	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	-14	0	14	multi-exon	FALSE	canonical	3	60	junction_1	293.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTTACCTGTAATGA	-38175500	False	NA	2	True	AATAAA	-34	NA	38176674	38163320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38171964_38172034_38176274
WTC11_00084732	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	264.670864786184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-38175556	True	NA	-105	True	AAGAAA	-42	NA	38176730	38163427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
WTC11_00084733	chr8	-	2193	6	FSM	ENSG00000147535.17	ENST00000529359.5	2185	6	0	-8	0	8	multi-exon	FALSE	canonical	3	232	junction_1	189.884596531683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTTTTTTAAATATTT	-38263439	True	NA	-2	True	AATAAA	-10	NA	38269140	38263121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881
WTC11_00084734	chr8	-	2142	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	-8	0	8	multi-exon	FALSE	canonical	3	232	junction_1	177.161335761754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTTTTTTAAATATTT	-38263523	True	NA	-2	True	AATAAA	-10	NA	38269224	38263121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
WTC11_00084739	chr8	-	870	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	-17	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	222.755783064972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-38263523	True	NA	-6	True	AATAAA	-18	NA	38269224	38264738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
WTC11_00084741	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	97.3354380480203	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263542	True	NA	-6	True	AATAAA	-18	NA	38269243	38266979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
WTC11_00084742	chr8	-	1611	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	-21	0	0	multi-exon	FALSE	canonical	3	584	junction_2	96	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263529	True	NA	-6	True	AATAAA	-18	NA	38269230	38266979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38267392_38267896_38268991_38269125
WTC11_00084743	chr8	-	10768	24	FSM	ENSG00000147548.17	ENST00000317025.13	10768	24	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	109.114116223192	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATATGTGGGCTTGTTC	-38377946	True	NA	NA	False	AATAAA	-20	NA	38382271	38269703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281466_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38299443_38299591_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
WTC11_00084744	chr8	-	5276	23	FSM	ENSG00000147548.17	ENST00000433384.6	5276	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	111.030373329341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGGTGGATTTTACCT	-38377920	True	NA	NA	False	ATTAAA	-20	NA	38382245	38275022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281466_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
WTC11_00084746	chr8	-	5020	17	NNC	ENSG00000147548.17	novel	10768	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	112.929579135628	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTTTTTCCAAGAACAA	-38377920	True	NA	NA	False	AAGAAA	-45	NA	38382245	38295795	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38295953_38299443_38299591_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38316424_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
WTC11_00084747	chr8	-	4403	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	-94	-314	-94	314	multi-exon	FALSE	canonical	3	181	junction_1	31.177310521564	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAACAAACCTT	-38382291	False	NA	NA	False	ACTAAA	-38	NA	38382366	38316102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
WTC11_00084748	chr8	-	4442	18	FSM	ENSG00000077782.22	ENST00000341462.9	4442	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	239.219202802826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGAGAAAATGAAATGG	-38458279	True	NA	-5	True	AATAAA	-16	NA	38468601	38411142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38412596_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
WTC11_00084749	chr8	-	5689	18	NNC	ENSG00000077782.22	novel	4094	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	219.911684066416	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGAGAAAATGAAATGG	-38458311	True	NA	-5	True	AATAAA	-16	NA	38468633	38411142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
WTC11_00084750	chr8	-	5590	18	FSM	ENSG00000077782.22	ENST00000532791.5	5590	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_9	212.909292380598	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTCCTTGCTGTTA	-38458300	True	NA	-93	True	AATATA	-18	NA	38468622	38411230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
WTC11_00084751	chr8	-	4057	16	FSM	ENSG00000077782.22	ENST00000683948.1	4057	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_14	258.684054398411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	-38458279	True	NA	-5	True	AATAAA	-19	NA	38468601	38412727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428436_38457355_38457535_38467980
WTC11_00084752	chr8	-	4098	18	FSM	ENSG00000077782.22	ENST00000683815.1	4094	18	0	-4	0	0	multi-exon	FALSE	canonical	3	158	junction_9	192.559558035958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	-38458311	True	NA	-5	True	AATAAA	-19	NA	38468633	38412727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
WTC11_00084753	chr8	-	3831	17	FSM	ENSG00000077782.22	ENST00000684654.1	3827	17	0	-4	0	0	multi-exon	FALSE	canonical	1	9	junction_15	258.338554214716	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	-38458311	True	NA	-5	True	AATAAA	-19	NA	38468633	38412727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
WTC11_00084755	chr8	-	4028	9	FSM	ENSG00000077782.22	ENST00000524528.2	4028	9	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_7	59.5103719951405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACATGTCTTTTTAAA	-38420536	False	NA	-6	True	TATAAA	-11	NA	38420550	38412961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227
WTC11_00084767	chr8	-	544	1	FSM	ENSG00000239218.2	ENST00000473700.2	357	1	-268	81	-268	-81	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCTGAGATTGTTAA	-38434966	False	NA	NA	False	NA	NA	NA	38435011	38434467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38434500_38435000
WTC11_00084768	chr8	-	1081	1	FSM	ENSG00000253570.1	ENST00000524091.1	540	1	-67	-474	-67	474	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAATAAAGCAAAATAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	38601267	38600186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38600200_38601300
WTC11_00084769	chr8	-	1846	5	NNC	ENSG00000169490.17	novel	1631	4	NA	NA	129	7745	intron_retention	FALSE	non_canonical	0	0	junction_1	294.153021402127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTCATTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	38996687	38981062	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38981098_38990802_38991546_38993544_38993661_38995317_38995795_38996212
WTC11_00084770	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	77.6831169989121	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986744	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
WTC11_00084771	chr8	-	1633	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	-2	0	2	multi-exon	FALSE	canonical	3	54	junction_3	264.30453815417	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTATGAGTATTTTCAG	-38986744	True	NA	-6	True	AATAAA	-17	NA	38996509	38990802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
WTC11_00084772	chr8	-	1267	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	-231	-567	76	0	multi-exon	FALSE	canonical	3	38	junction_3	271.825107171668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	NA	False	NA	-8	True	AATAAA	-15	NA	38996740	38990804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
WTC11_00084775	chr8	-	2472	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	-1	0	1	multi-exon	FALSE	canonical	3	22	junction_2	9.62635271879577	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTCAGTTTGGGTTTA	-40895719	True	NA	NA	False	AGTAAA	-21	NA	40897826	40530588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
WTC11_00084777	chr8	-	4470	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	-6	0	6	multi-exon	FALSE	canonical	3	548	junction_1	22.5	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTGACTTTTTTT	-41295946	True	NA	-11	True	ACTAAA	-24	NA	41309473	41261955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41265490_41303460_41303539_41308615
WTC11_00084778	chr8	-	2012	14	FSM	ENSG00000029534.21	ENST00000645531.1	2012	14	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_5	9.9875662345709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTACTTTTTCCCAACCT	-41693904	False	NA	NA	False	TTTAAA	-18	NA	41693929	41655374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41655754_41661800_41661942_41663658_41663743_41668266_41668565_41672353_41672427_41684543_41684691_41686151_41686284_41688155_41688231_41688510_41688590_41690226_41690347_41690473_41690600_41692647_41692877_41693104_41693202_41693897
WTC11_00084779	chr8	-	2006	17	NNC	ENSG00000029534.21	novel	8237	42	NA	NA	30073	-44625	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1332913581916	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGAGTCCCACGTCGCT	-41767495	False	NA	NA	False	NA	NA	NA	41767520	41712965	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_41713020_41714155_41714255_41714975_41715075_41715651_41715850_41716952_41717052_41717603_41717703_41718105_41718205_41719660_41719859_41723124_41723224_41723534_41723634_41724455_41724555_41725760_41725947_41727249_41727349_41727907_41728007_41733970_41734070_41758035_41758138_41767341
WTC11_00084780	chr8	-	9153	17	FSM	ENSG00000083168.11	ENST00000265713.8	9153	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	5.04820512657717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTGCATGTGGAA	-42050807	True	NA	1	True	AATAAA	-21	NA	42051987	41929478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
WTC11_00084781	chr8	-	8006	18	FSM	ENSG00000083168.11	ENST00000396930.4	8006	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	5.8416237018528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGGTAAAAAAAAAAAAAA	-42050810	True	NA	NA	False	NA	NA	NA	42051990	41930760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
WTC11_00084782	chr8	-	3451	2	FSM	ENSG00000083168.11	ENST00000650495.1	6799	2	881	2467	881	1089	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTTACAGAACTCAC	NA	False	NA	NA	False	NA	NA	NA	41943979	41937255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41937569_41940841
WTC11_00084783	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.30858664117024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-42207292	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
WTC11_00084784	chr8	-	2436	13	FSM	ENSG00000104368.19	ENST00000352041.7	2516	13	80	0	-31	0	multi-exon	FALSE	canonical	1	2	junction_10	5.77530662966623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGGAATGGTT	-42207323	True	NA	-8	True	AATAAA	-28	NA	42207596	42175236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42191371_42191415_42193113_42193212_42207493
WTC11_00084785	chr8	-	635	6	FSM	ENSG00000104368.19	ENST00000520523.5	670	6	35	0	35	0	multi-exon	FALSE	canonical	1	2	junction_5	6.61513416341649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGGGCACATCCCCA	NA	False	NA	NA	False	NA	NA	NA	42193692	42187400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42193619
WTC11_00084786	chr8	-	3753	11	FSM	ENSG00000168575.10	ENST00000520262.6	3752	11	0	-1	0	1	multi-exon	FALSE	canonical	2	8	junction_10	33.9228536535475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTGAAGCCTTTTT	-42501056	True	NA	-10	True	AATAAA	-17	NA	42501231	42416473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42501030
WTC11_00084787	chr8	-	3592	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	99	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_10	30.0026665481587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	-42540932	False	NA	-11	True	AATAAA	-16	NA	42540955	42416474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42540914
WTC11_00084788	chr8	-	3595	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_10	18.4997297277555	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	-42541558	False	NA	-11	True	AATAAA	-16	NA	42541581	42416474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541537
WTC11_00084789	chr8	-	3805	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	90	-1	combination_of_known_junctions	FALSE	canonical	2	13	junction_10	32.5147658764445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCCTCTGAAGCCTTT	-42502496	False	NA	-12	True	AATAAA	-15	NA	42502538	42416475	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42502283
WTC11_00084792	chr8	-	2261	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	-48	-270	-28	268	multi-exon	FALSE	canonical	3	17	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAACTAGCTGGGCAT	-42841057	True	NA	NA	False	ACTAAA	-3	NA	42843353	42836405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42838337_42843023
WTC11_00084793	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-42841029	True	NA	-6	True	ATTAAA	-18	NA	42843325	42836673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42838337_42839185_42839382_42843023
WTC11_00084794	chr8	-	606	6	FSM	ENSG00000120925.16	ENST00000319104.7	1866	6	0	1260	0	-1260	multi-exon	FALSE	canonical	1	1	junction_1	31.891064579283	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGGCCTCAGCATATAC	-42896098	True	NA	NA	False	NA	NA	NA	42896585	42850896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42850998_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
WTC11_00084795	chr8	-	4120	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	-4	0	4	multi-exon	FALSE	canonical	3	18	junction_6	24.2950612265127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTATTTTTCTGTTTATT	-42896460	False	NA	4	True	AATAAA	-27	NA	42896723	42853292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
WTC11_00084796	chr8	-	3848	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	-85	1	16	-1	multi-exon	FALSE	canonical	3	63	junction_6	9.16515138991168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGGTGTTATTTTT	-42896203	True	NA	-5	True	AATAAA	-18	NA	42896690	42853301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
WTC11_00084797	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	30.6555052152138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42896168	True	NA	NA	False	NA	NA	NA	42896655	42855247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
WTC11_00084798	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22.8508205541945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	-42896101	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
WTC11_00084800	chr8	-	520	3	NNC	ENSG00000120925.16	novel	195	2	NA	NA	187	2349	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGTGTTCCTATGTT	-42896135	False	NA	NA	False	NA	NA	NA	42896398	42885378	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_42885610_42887727_42887872_42896253
WTC11_00084801	chr8	-	1320	1	FSM	ENSG00000221869.5	ENST00000408965.4	1252	1	-68	0	-68	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCCTATATTCGCA	-47738203	False	NA	-1	True	AATAAA	-18	NA	47738232	47736912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47736900_47738200
WTC11_00084802	chr8	-	13459	86	FSM	ENSG00000253729.8	ENST00000314191.7	13459	86	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_70	209.979113807288	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTATCTCTTTTAT	-47930216	True	NA	-4	True	AATAAA	-15	NA	47960136	47773110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782161_47782255_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
WTC11_00084803	chr8	-	13396	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	12	-624	12	0	multi-exon	FALSE	canonical	3	38	junction_6	206.55691621727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTATCTCTTTTAT	-47930246	True	NA	-4	True	AATAAA	-15	NA	47960166	47773110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
WTC11_00084806	chr8	-	3834	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	-54	-2576	0	4	multi-exon	FALSE	canonical	3	8	junction_4	50.2179250865664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCTGACTTTTATGTT	-51895487	True	NA	-1	True	AATAAA	-30	NA	51899024	51817570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
WTC11_00084807	chr8	-	4193	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	-149	0	1	0	multi-exon	FALSE	canonical	3	83	junction_4	16.4389780704276	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	NA	False	NA	-13	True	AATAAA	-18	NA	51899185	51817582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
WTC11_00084809	chr8	-	1141	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_2	1.92028643696715	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGCTTTTGAAGTGTGA	-52565209	True	NA	NA	False	ATTAAA	-17	NA	52565430	52534035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
WTC11_00084810	chr8	-	6934	24	FSM	ENSG00000023287.13	ENST00000025008.10	6636	24	12	-310	0	310	multi-exon	FALSE	canonical	3	145	junction_2	51.2274663450043	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATAAAGCACAAAAAACG	-52710978	True	NA	67	True	NA	NA	NA	52714423	52622147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
WTC11_00084811	chr8	-	6937	24	FSM	ENSG00000023287.13	ENST00000435644.6	6614	24	-12	-311	0	310	multi-exon	FALSE	canonical	3	196	junction_12	43.3015102964186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATAAAGCACAAAAAACG	-52710990	True	NA	67	True	NA	NA	NA	52714435	52622147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
WTC11_00084813	chr8	-	8549	23	NNC	ENSG00000023287.13	novel	6614	24	NA	NA	-1809	310	intron_retention	FALSE	canonical	2	21	junction_20	100.320694453025	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATAAAGCACAAAAAACG	NA	False	NA	67	True	NA	NA	NA	52716275	52622147	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645847_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683635_52683886_52684014_52686852_52686968_52714074
WTC11_00084816	chr8	-	740	4	FSM	ENSG00000023287.13	ENST00000518710.5	711	4	-29	0	10	0	multi-exon	FALSE	canonical	3	24	junction_2	111.463995183298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGATGCCTGCAGTTT	-52711011	True	NA	NA	False	AATAAA	-13	NA	52714456	52683603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52683720_52683886_52684014_52686852_52686968_52714074
WTC11_00084819	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	45.3247323317716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	-53839684	True	NA	2	True	AATAAA	-27	NA	53843245	53715542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
WTC11_00084820	chr8	-	2379	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	-14	0	0	multi-exon	FALSE	canonical	3	66	junction_7	64.7179242731272	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	NA	False	NA	2	True	AATAAA	-27	NA	53843558	53715542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
WTC11_00084821	chr8	-	1864	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	28	0	3	0	multi-exon	FALSE	canonical	3	40	junction_13	71.481615131271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	-53839453	False	NA	-62	True	AAGAAA	-27	NA	53843014	53715730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
WTC11_00084825	chr8	-	1149	1	FSM	ENSG00000244159.1	ENST00000498403.1	237	1	-102	-810	-102	810	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACCATCTCAGATGGTG	NA	False	NA	NA	False	NA	NA	NA	53887346	53886197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53886200_53887300
WTC11_00084826	chr8	-	2781	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.453031526084	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-54001146	True	NA	2	True	AATAAA	-27	NA	54022448	53966551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
WTC11_00084827	chr8	-	2853	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	-60	-75	-52	75	multi-exon	FALSE	canonical	0	0	junction_4	624.994799978368	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGGTATTTCTAAAGT	-54022493	False	NA	77	True	NA	NA	NA	54022508	53966476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
WTC11_00084832	chr8	-	2422	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	499.121994538508	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086079	True	NA	NA	False	NA	NA	NA	54101828	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046368_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00084833	chr8	-	2443	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.121994538508	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086109	True	NA	NA	False	NA	NA	NA	54101858	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034770_54046378_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00084834	chr8	-	342	3	FSM	ENSG00000260955.2	ENST00000565668.2	440	3	16	82	16	-82	multi-exon	FALSE	canonical	1	1	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGTGACAGCACAATG	-54045576	False	NA	NA	False	NA	NA	NA	54045613	54043070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54043219_54044816_54044954_54045556
WTC11_00084835	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	1411	junction_6	92.2936041933568	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-54086198	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00084836	chr8	-	2527	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	-1	0	0	multi-exon	FALSE	canonical	3	97	junction_8	493.19048994785	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-54101486	False	NA	-1	True	AATAAA	-24	NA	54101554	54046366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
WTC11_00084841	chr8	-	2604	3	FSM	ENSG00000167904.16	ENST00000519460.1	2588	3	0	-16	0	2	multi-exon	FALSE	canonical	3	157	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTGAGAAATTACATG	NA	False	NA	2	True	AATAAA	-17	NA	55746047	55738741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55743480_55743621_55745060
WTC11_00084842	chr8	-	2582	8	NIC	ENSG00000167904.16	novel	2573	8	NA	NA	-6	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	47.2029919494474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAGTTAATTTTCTTGA	-55770773	True	NA	-9	True	AATAAA	-6	NA	55773340	55738752	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
WTC11_00084843	chr8	-	2589	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	-16	0	2	multi-exon	FALSE	canonical	3	110	junction_3	23.1384475516842	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTGAGAAATTACATG	-55770811	True	NA	2	True	AATAAA	-17	NA	55773378	55738741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
WTC11_00084844	chr8	-	2413	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	-12	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	61.0245852095694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTCTTGAGAAATTA	-55770840	False	NA	-2	True	AATAAA	-13	NA	55773407	55738745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
WTC11_00084846	chr8	-	2387	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	13	0	-13	multi-exon	FALSE	canonical	3	136	junction_2	24.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAACATTCTCAAGT	-55770800	True	NA	NA	False	ATTAAA	-5	NA	55773367	55760785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55763029_55763935_55763981_55773268
WTC11_00084847	chr8	-	1170	1	FSM	ENSG00000236814.1	ENST00000435260.1	1170	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGTAAGATTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	56051207	56050037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56050000_56051200
WTC11_00084848	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9198	junction_2	181	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-55869821	True	NA	7	True	AATAAA	-31	NA	56074506	56073041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56073769_56074059
WTC11_00084849	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_3	183.571965906199	6767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869821	True	NA	-5	True	AATAAA	-19	NA	56074506	56073053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
WTC11_00084850	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	4338.02545968657	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869825	True	NA	-5	True	AATAAA	-19	NA	56074510	56073053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
WTC11_00084851	chr8	-	671	3	FSM	ENSG00000008988.11	ENST00000518875.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAACGATAAACACTTG	-55869813	True	NA	-111	True	AATGAA	-42	NA	56074498	56073315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073769_56074059_56074160_56074380
WTC11_00084852	chr8	-	1078	1	FSM	ENSG00000172680.1	ENST00000311923.1	1041	1	16	-53	16	53	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGAGATGTCGAAGAAAA	NA	False	NA	NA	False	TTTAAA	-4	NA	56113966	56112888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56112900_56114000
WTC11_00084853	chr8	-	6886	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	27	-5229	0	39	multi-exon	FALSE	canonical	3	29	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTTGCTATCACATT	-56209714	True	NA	36	True	AATAGA	-8	NA	56211273	56160869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56167504_56171090_56171190_56211120
WTC11_00084854	chr8	-	7316	5	FSM	ENSG00000181690.8	ENST00000316981.8	7311	5	0	-5	0	5	multi-exon	FALSE	canonical	3	14	junction_4	6.12372435695795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGATCTTCCTGAAATTT	-56209714	True	NA	2	True	AATAAA	-23	NA	56211273	56160903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56179408_56179514_56211120
WTC11_00084859	chr8	-	7226	5	FSM	ENSG00000104331.9	ENST00000262644.9	7224	5	0	-2	0	2	multi-exon	FALSE	canonical	3	113	junction_1	14.1244468918255	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGCTGCATCTGCTTT	-56991914	True	NA	-3	True	AATAAA	-21	NA	56993867	56957928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56964065_56966190_56966353_56978049_56978146_56980034_56980198_56993198
WTC11_00084860	chr8	-	3622	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	-48	0	-48	0	multi-exon	TRUE	canonical	3	76	junction_24	18.7980199902957	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-58659852	False	NA	NA	False	ATTAAA	-17	NA	58659901	58583507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
WTC11_00084861	chr8	-	4680	31	FSM	ENSG00000035681.9	ENST00000427130.6	3371	31	-1049	-260	-730	-2	multi-exon	FALSE	canonical	3	21	junction_30	24.3852414382142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTGTTTTCACTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	58660583	58583509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659194
WTC11_00084867	chr8	-	4067	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	9	0	-9	multi-exon	FALSE	canonical	3	32	junction_1	5.8309518948453	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCGTATTCTATTTGGT	-59119081	False	NA	-8	True	AATAAA	-35	NA	59119147	58805420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
WTC11_00084868	chr8	-	5725	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	10	0	-10	multi-exon	TRUE	canonical	3	39	junction_1	9.73315853153538	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATTATTTCCTTGAC	-60280774	True	NA	-9	True	ATTAAA	-12	NA	60281400	60185421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
WTC11_00084869	chr8	-	1825	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	7.586238884201	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTATTTATTTACC	-60280759	True	NA	NA	False	AATAAA	-43	NA	60281385	60208070	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
WTC11_00084871	chr8	-	5308	25	FSM	ENSG00000198363.18	ENST00000379454.9	5301	25	0	-7	0	7	multi-exon	TRUE	canonical	0	0	junction_22	182.864628133005	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCTTCTCTTACTT	-61707307	True	NA	0	True	AATAAA	-26	NA	61714592	61500548	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
WTC11_00084874	chr8	-	3738	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_11	153.053612450094	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAATTTCTTTTCTTTTG	-61707311	True	NA	NA	False	AATAAA	-28	NA	61714596	61623701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
WTC11_00084875	chr8	-	3687	13	FSM	ENSG00000198363.18	ENST00000445642.6	3717	13	0	30	0	-30	multi-exon	FALSE	canonical	0	0	junction_10	195.870847470697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAATAAACATGAGAGT	-61707355	True	NA	NA	False	NA	NA	NA	61714640	61623739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
WTC11_00084876	chr8	-	3741	14	NIC	ENSG00000198363.18	novel	2874	15	NA	NA	0	-30	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	173.480384444416	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAATAAACATGAGAGT	-61707355	True	NA	NA	False	NA	NA	NA	61714640	61623739	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
WTC11_00084877	chr8	-	2874	15	FSM	ENSG00000198363.18	ENST00000519234.5	2874	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	223.564821901472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	-61707240	True	NA	-12	True	AATAAA	-17	NA	61714525	61624536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61682438_61682484_61684038_61684189_61714268
WTC11_00084878	chr8	-	2746	13	FSM	ENSG00000198363.18	ENST00000518068.5	2744	13	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_10	193.752562707066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	-61707283	True	NA	-12	True	AATAAA	-17	NA	61714568	61624536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
WTC11_00084880	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	256.549323825957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	-61707302	True	NA	-10	True	AATAAA	-20	NA	61714587	61656127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
WTC11_00084882	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	39.6703210851639	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	-63033602	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
WTC11_00084884	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	173.195890039373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	-63033597	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
WTC11_00084885	chr8	-	778	1	FSM	ENSG00000270673.1	ENST00000603538.1	718	1	-60	0	-60	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTCCATGGAAGGAA	-63168043	True	NA	NA	False	AATAAA	-25	NA	63168502	63167724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63167700_63168500
WTC11_00084887	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_11	33.2615894589139	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-65838355	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
WTC11_00084888	chr8	-	2425	13	FSM	ENSG00000205268.11	ENST00000379419.8	2425	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	102.027059319248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTCCTTCAGATCA	-65789057	False	27	-14	True	AATAAA	-12	NA	65789084	65718378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65788881
WTC11_00084890	chr8	-	2986	12	FSM	ENSG00000205268.11	ENST00000396642.7	2986	12	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_10	33.1497977506514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGACAAAAGAGAATTGAAT	-65841065	False	3709	NA	False	AATGAA	-40	NA	65841508	65721797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
WTC11_00084893	chr8	-	5161	16	FSM	ENSG00000185697.17	ENST00000522677.8	5161	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	8.51508465411041	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATTGCTCATTCACT	-66612497	True	NA	1	True	AATAAA	-20	NA	66613218	66562174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66564826_66566063_66566244_66566683_66566789_66566875_66566993_66572481_66572597_66573363_66573507_66576006_66576376_66580132_66580367_66592439_66592545_66593119_66593195_66595582_66595758_66597329_66597551_66599049_66599143_66601697_66601770_66602417_66602524_66612818
WTC11_00084895	chr8	-	9968	3	FSM	ENSG00000175073.8	ENST00000310421.5	9956	3	0	-12	0	12	multi-exon	FALSE	canonical	3	68	junction_2	11	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTCTGAACTGTATA	-66663078	True	NA	NA	False	ATTAAA	-34	NA	66667231	66628474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66635373_66651457_66651545_66664248
WTC11_00084897	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	651	junction_3	86.5036929205273	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	-66908793	True	NA	96	True	NA	NA	NA	66925596	66921817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
WTC11_00084898	chr8	-	361	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	1	0	-1	multi-exon	FALSE	canonical	3	174	junction_2	330.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCCATTCTCATAGTC	-66908738	True	NA	-14	True	AATAAA	-26	NA	66925541	66921927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922115_66922323_66922393_66925436
WTC11_00084900	chr8	-	718	5	FSM	ENSG00000121022.14	ENST00000523086.5	717	5	0	-1	0	1	multi-exon	FALSE	canonical	2	7	junction_3	366.953931032221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTGATTTTTTTGTG	-67056513	False	NA	NA	False	AATAAA	-18	NA	67056560	67043077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67043318_67045811_67045961_67047684_67047860_67051229_67051342_67056518
WTC11_00084901	chr8	-	1297	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	-1	0	1	multi-exon	FALSE	canonical	3	645	junction_7	43.1367072248692	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTGATTTTTTTGTG	-67055434	True	NA	NA	False	AATAAA	-18	NA	67062133	67043077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
WTC11_00084902	chr8	-	5882	30	FSM	ENSG00000066777.9	ENST00000520381.5	5882	30	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	67.619309275682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCCTAAATTCCAGT	-67271671	True	NA	NA	False	AATAAA	-22	NA	67271708	67173510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67175573_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701
WTC11_00084903	chr8	-	7452	39	NNC	ENSG00000066777.9	novel	7320	39	NA	NA	-150	0	intron_retention	FALSE	canonical	3	46	junction_6	64.5462534665266	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	-67343919	False	NA	-14	True	AATAAA	-33	NA	67343931	67197657	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216607_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
WTC11_00084904	chr8	-	7470	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	-150	0	-150	0	multi-exon	FALSE	canonical	3	153	junction_34	56.6389217016315	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	-67343919	False	NA	-14	True	AATAAA	-33	NA	67343931	67197657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
WTC11_00084905	chr8	-	7131	40	NIC	ENSG00000066777.9	novel	7320	39	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_39	63.3203973085993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTGCAATCAAAACCTG	-67340066	True	NA	-30	True	AATAAA	-17	NA	67343781	67197673	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163_67343337_67343509
WTC11_00084910	chr8	-	2924	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	-86	4	-86	2	multi-exon	FALSE	canonical	3	5	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTTTTGGCATTATGA	NA	False	NA	NA	False	AATGAA	-5	NA	68331597	68302249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_68304802_68306517_68306599_68331306
WTC11_00084911	chr8	-	280	2	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	107	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCACATTCACTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	68978706	68973087	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_68973312_68978650
WTC11_00084914	chr8	-	307	1	FSM	ENSG00000255107.1	ENST00000531211.1	1277	1	943	27	943	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGGAAAAATTAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69859597	69859290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_69859300_69859600
WTC11_00084916	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_7	31.6518046040645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-70065129	True	NA	NA	False	NA	NA	NA	70071252	70051650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
WTC11_00084921	chr8	-	1534	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	-8	0	8	multi-exon	FALSE	canonical	3	212	junction_5	31.5669482563998	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATTATTTCTGTAAT	-70666531	True	NA	NA	False	ATTAAA	-25	NA	70669185	70637257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
WTC11_00084926	chr8	-	1742	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	-509	0	509	multi-exon	FALSE	canonical	3	22642	junction_1	5489.87466968863	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGATTGTATCAGTGTT	-73216371	True	NA	-11	True	TATAAA	-15	NA	73293633	73289732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
WTC11_00084927	chr8	-	1543	6	FSM	ENSG00000147604.14	ENST00000396467.5	1526	6	0	-17	0	0	multi-exon	FALSE	canonical	3	21	junction_5	14516.7662735197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTTCCTTTTGCA	-73216371	True	NA	-25	True	TATAAA	-13	NA	73293633	73290266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292796_73293598
WTC11_00084928	chr8	-	1644	6	FSM	ENSG00000147604.14	ENST00000396465.5	1308	6	0	-336	0	334	multi-exon	FALSE	canonical	3	48	junction_5	14506.070108751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTACCATGATTATTTT	-73294198	True	NA	-90	True	NA	NA	NA	73294438	73290705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
WTC11_00084934	chr8	-	2847	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	113.636657557447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTGTTGTTGTTCTTTT	-73742422	True	NA	-5	True	AGTAAA	-23	NA	73746849	73420369	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
WTC11_00084935	chr8	-	2652	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	0	534	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	140.51957159058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	-73747075	True	NA	-3	True	AATAAA	-17	NA	73747473	73526834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73747386
WTC11_00084937	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	45.3677352857587	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	-73742413	True	NA	-19	True	AGTAAA	-23	NA	73746840	73549603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
WTC11_00084942	chr8	-	4179	13	ISM	ENSG00000040341.18	ENST00000524300.6	2970	15	13	129235	-9	0	5prime_fragment	FALSE	canonical	3	121	junction_10	115.964673739702	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	-73742400	True	NA	-19	True	AGTAAA	-23	NA	73746827	73549603	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
WTC11_00084944	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	138.278559437101	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	-73742413	True	NA	-3	True	ATTAAA	-29	NA	73746840	73652256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
WTC11_00084945	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	176.419953520003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	-73742391	True	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
WTC11_00084950	chr8	-	8427	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	-1	0	0	multi-exon	FALSE	canonical	3	197	junction_5	31.5467906450086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTGGCTTTTTTTAT	-73872790	True	NA	-2	True	AATAAA	-18	NA	73878910	73786218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
WTC11_00084952	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	97.7941076957094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-73872755	True	NA	-12	True	AATAAA	-24	NA	73878875	73790604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
WTC11_00084953	chr8	-	747	6	FSM	ENSG00000104343.21	ENST00000519277.5	747	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	113.006902444054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAAAAGCTCCAGGTCCT	-73872734	True	NA	NA	False	AATATA	-33	NA	73878854	73793823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73794116_73796606_73796691_73805650_73805727_73810473_73810630_73830380_73830473_73878807
WTC11_00084955	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	1408.27767148386	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946268	True	NA	NA	False	NA	NA	NA	73972287	73945118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
WTC11_00084956	chr8	-	1995	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-47	0	0	multi-exon	FALSE	canonical	3	18	junction_4	1850.40738757712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73971894	False	26019	NA	False	NA	NA	NA	73971908	73945118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
WTC11_00084957	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1899.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	-73946151	True	NA	2	True	AATAAA	-37	NA	73972170	73945607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73972076
WTC11_00084958	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	1721.28756716851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	-73946087	True	NA	-10	True	AATAAA	-13	NA	73972106	73946400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
WTC11_00084959	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	1847.14365643282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-73946213	True	NA	-82	True	NA	NA	NA	73972232	73946472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
WTC11_00084960	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1781.98496065483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	-73971894	False	26019	45	True	NA	NA	NA	73971908	73946533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
WTC11_00084961	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	1756.52049518359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	-73946233	True	NA	-121	True	NA	NA	NA	73972252	73946699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
WTC11_00084969	chr8	-	315	2	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76217397	76213052	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_76213236_76217265
WTC11_00084970	chr8	-	5268	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	-1043	-56	-77	56	multi-exon	FALSE	canonical	3	199	junction_3	10.2306728354819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAAACAGTACTTTAC	NA	False	NA	NA	False	NA	NA	NA	77001121	76980201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
WTC11_00084971	chr8	-	4343	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	-17	-2699	-17	0	multi-exon	FALSE	canonical	3	44	junction_2	90	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTATTATTTTGATAG	-77000272	False	NA	NA	False	AATAAA	-23	NA	77000284	76980257	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76984196_76986186_76986297_76999989
WTC11_00084972	chr8	-	688	2	FSM	ENSG00000164751.15	ENST00000520203.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAATTGCATGTATAT	-77000218	False	NA	NA	False	NA	NA	NA	77000230	76987891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76988339_76999989
WTC11_00084974	chr8	-	327	1	FSM	ENSG00000240540.2	ENST00000463217.2	1183	1	911	-55	911	55	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAACAAACATACAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	79571424	79571097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79571100_79571400
WTC11_00084980	chr8	-	814	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_2	234	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023697	True	NA	-4	True	AATAAA	-21	NA	80030253	79918716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_79919149_80002998_80003181_80030053
WTC11_00084985	chr8	-	391	1	FSM	ENSG00000272264.1	ENST00000607017.1	577	1	31	155	31	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGAGCAAAACTCCAGCA	NA	False	NA	NA	False	NA	NA	NA	80033269	80032878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80032900_80033300
WTC11_00084986	chr8	-	4039	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.694752338288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-80162374	True	NA	1	True	AATACA	-23	NA	80171556	80034744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
WTC11_00084988	chr8	-	584	7	FSM	ENSG00000076554.16	ENST00000518517.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	484.94859406837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGGCTGCAAATGCTAG	-80162289	True	NA	NA	False	NA	NA	NA	80171471	80038184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80119814_80119885_80171424
WTC11_00084992	chr8	-	2172	1	FSM	ENSG00000272425.1	ENST00000606235.1	2172	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTAATTCTCCTCTGGT	-81277521	False	NA	NA	False	AATAAA	-24	NA	81277570	81275398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81275400_81277600
WTC11_00084993	chr8	-	406	1	FSM	ENSG00000237264.4	ENST00000517577.2	551	1	129	16	129	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGATAATGAAAGCTAAGT	NA	False	NA	NA	False	NA	NA	NA	81522103	81521697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81521700_81522100
WTC11_00084994	chr8	-	3468	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	24	-123	0	123	multi-exon	FALSE	canonical	3	159	junction_2	15.352117117844	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGACTAATTTGTCCT	-81683947	True	NA	NA	False	NA	NA	NA	81686301	81656790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
WTC11_00084995	chr8	-	4020	9	ISM	ENSG00000133731.10	ENST00000449740.6	1180	10	-81	-2471	-33	123	intron_retention	FALSE	canonical	3	45	junction_8	48.8746803058598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGACTAATTTGTCCT	-81684010	True	NA	NA	False	NA	NA	NA	81686364	81656790	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762
WTC11_00085003	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	150.368436404276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	-81717133	True	NA	NA	False	NA	NA	NA	81721295	81702681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
WTC11_00085006	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	51.6346675101999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717126	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
WTC11_00085012	chr8	-	582	5	FSM	ENSG00000104231.11	ENST00000519820.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	54.1387107345567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTATCTCTTTTG	-81717138	True	NA	NA	False	NA	NA	NA	81721300	81714598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
WTC11_00085018	chr8	-	1033	1	FSM	ENSG00000206228.4	ENST00000509706.1	756	1	3	-280	3	280	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCTAAATGTAATAGTC	NA	False	NA	NA	False	NA	NA	NA	82292376	82291343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_82291300_82292400
WTC11_00085019	chr8	-	521	1	FSM	ENSG00000260493.1	ENST00000566000.1	1264	1	257	486	236	-486	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCGGTGGCTTACGCCT	-85176755	False	NA	NA	False	AATAAA	-19	NA	85176805	85176284	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85176300_85176800
WTC11_00085021	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	272.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	-85201948	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85217385_85217503_85220305
WTC11_00085022	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	554.178220430937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	-85201934	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
WTC11_00085024	chr8	-	586	5	FSM	ENSG00000176731.12	ENST00000612977.4	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	374.532625414663	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	-85201965	True	NA	0	True	AATAAA	-33	NA	85220384	85214486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219364_85220305
WTC11_00085031	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	96.8336201946411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-86504932	True	NA	72	True	NA	NA	NA	86508681	86474020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
WTC11_00085033	chr8	-	1109	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	-3	0	0	multi-exon	FALSE	canonical	3	35	junction_5	77.4216337660218	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATGGCTCAGGCAAAG	-86504926	True	NA	-16	True	AATAAA	-29	NA	86508675	86474108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
WTC11_00085035	chr8	-	1090	10	NNC	ENSG00000176623.12	novel	2970	10	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	80.9006401720463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATTCTAAACTTAAT	-86504926	True	NA	-50	True	AATAAA	-12	NA	86508675	86474259	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508449
WTC11_00085039	chr8	-	11823	10	FSM	ENSG00000156103.16	ENST00000286614.11	11551	10	-272	0	270	0	multi-exon	TRUE	canonical	3	21	junction_3	5.76280110217331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCATAGACATTGTGGT	-88327694	False	NA	-12	True	AATAAA	-17	NA	88327755	88032010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88041796_88046668_88046785_88056127_88056279_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
WTC11_00085040	chr8	-	591	1	FSM	ENSG00000271156.1	ENST00000604955.1	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTACTCATAGGAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	88808908	88808317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88808300_88808900
WTC11_00085041	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	12	junction_1	2	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	-89757678	True	NA	NA	False	NA	NA	NA	89757722	89724018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89724967_89725517_89725642_89757044
WTC11_00085044	chr8	-	503	2	FSM	ENSG00000104320.14	ENST00000474821.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTTGTATGTAACAAT	-89937335	False	NA	-17	True	AATAAA	-16	NA	89937347	89935431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89935613_89937025
WTC11_00085045	chr8	-	2405	16	NIC	ENSG00000104320.14	novel	4907	19	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	65.9880797316202	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATTCTTTTGTATGT	-89981943	True	NA	-23	True	AATAAA	-10	NA	89984611	89935437	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524
WTC11_00085049	chr8	-	2560	12	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	1661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.873739883603	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATATTTCACTAGAGG	-90082411	True	NA	NA	False	AAAAAG	-8	NA	90082871	90056946	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_90056986_90058611_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
WTC11_00085050	chr8	-	4244	3	FSM	ENSG00000104327.7	ENST00000469032.1	5392	3	1148	0	110	0	multi-exon	FALSE	canonical	3	371	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90063305	False	NA	-1	True	AATAAA	-22	NA	90063320	90058607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90060287_90060628_90063154_90063280
WTC11_00085051	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_10	41.947586342959	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
WTC11_00085055	chr8	-	217	2	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCAGTGGATGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	90685661	90684597	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_90684630_90685476
WTC11_00085056	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	23.5762592452662	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-90983499	True	NA	-5	True	AATAAA	-20	NA	90985238	90958470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
WTC11_00085057	chr8	-	2759	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	32.1804806262016	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATACACTTGAATA	-91037228	True	NA	-5	True	AATAAA	-26	NA	91040859	90993801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
WTC11_00085058	chr8	-	2946	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	-97	-2008	-97	-1	multi-exon	FALSE	canonical	3	27	junction_7	131.318432111585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTATATACACTTGAAT	-91040959	False	NA	-6	True	AATAAA	-25	NA	91040969	90993802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
WTC11_00085059	chr8	-	4144	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	748	40	-748	multi-exon	FALSE	canonical	3	39	junction_1	111.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTCCCCTCCAGCC	-91066771	True	NA	NA	False	NA	NA	NA	91070149	91060065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91063747_91069578_91069823_91069930
WTC11_00085060	chr8	-	4885	2	FSM	ENSG00000253738.3	ENST00000659792.1	5405	2	125	395	125	-395	multi-exon	FALSE	canonical	3	262	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACAGCCCCGTATATT	NA	False	NA	NA	False	NA	NA	NA	91070458	91065465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91069823_91069930
WTC11_00085061	chr8	-	6970	10	FSM	ENSG00000079102.16	ENST00000422361.6	2450	10	274	-4794	0	-24	multi-exon	FALSE	canonical	3	21	junction_3	4.79454422453143	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATAAAGTTGTGTT	-92017342	False	NA	-32	True	NA	NA	NA	92017363	91954998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225
WTC11_00085063	chr8	-	620	2	FSM	ENSG00000079102.16	ENST00000521078.1	781	2	161	0	161	0	multi-exon	FALSE	canonical	3	29	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTCAGAACTGTCGGA	NA	False	NA	NA	False	NA	NA	NA	91970999	91960239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657
WTC11_00085065	chr8	-	976	6	FSM	ENSG00000079102.16	ENST00000518992.5	976	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	8.06473806146238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGCTTCTCGATGTG	-92094615	True	NA	NA	False	NA	NA	NA	92095230	92005167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027
WTC11_00085068	chr8	-	372	1	FSM	ENSG00000233778.3	ENST00000465478.1	348	1	68	-92	68	92	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAATATAACCACTTTG	NA	False	NA	NA	False	AATAAA	-41	NA	92144367	92143995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92144000_92144400
WTC11_00085076	chr8	-	8529	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_2	36.5361312797194	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACATTCTTGGTATAT	-93735664	True	NA	-5	True	AATAAA	-18	NA	93741009	93728155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
WTC11_00085078	chr8	-	2191	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	-4	0	4	multi-exon	FALSE	canonical	3	17	junction_1	3.35410196624968	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTGATTTTCCTCC	-94261547	True	NA	NA	False	AATAAA	-27	NA	94262319	94249248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
WTC11_00085079	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	21.3875798403787	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	-94472004	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
WTC11_00085083	chr8	-	5843	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	-82	-3882	-29	3882	multi-exon	FALSE	canonical	3	82	junction_1	66.0454389038335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTGGAAAGCAAAATAAATG	-94472033	True	NA	NA	False	NA	NA	NA	94475144	94427277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
WTC11_00085085	chr8	-	5675	25	NNC	ENSG00000164944.12	novel	6478	24	NA	NA	0	26528	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.237830426287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGTATTTATAATAACA	-94551835	True	NA	NA	False	NA	NA	NA	94553469	94461160	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_94461191_94488521_94488861_94489938_94490083_94491577_94491910_94492651_94492819_94494859_94494957_94495730_94495892_94496327_94496481_94499373_94499507_94506499_94506718_94509687_94509941_94510416_94510653_94511184_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
WTC11_00085087	chr8	-	3986	13	FSM	ENSG00000164944.12	ENST00000421249.2	3924	13	8	-70	8	70	multi-exon	FALSE	canonical	3	43	junction_10	16.7587042060735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAACAGGTTATTGAGC	-94551887	True	NA	72	True	AATAAA	-34	NA	94553521	94510662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
WTC11_00085088	chr8	-	2203	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGCTGGTGGTTGACA	-94639136	False	331	15	True	ATTAAA	-40	NA	94639467	94637264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94637300_94639500
WTC11_00085089	chr8	-	3272	12	FSM	ENSG00000175305.18	ENST00000520509.5	3330	12	58	0	58	0	multi-exon	FALSE	canonical	2	3	junction_11	18.5142339702223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGCACTATGGTAGCA	-94896587	False	NA	NA	False	NA	NA	NA	94896620	94879769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94896451
WTC11_00085090	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.73742648398299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	-94894900	True	NA	NA	False	AATAAA	-32	NA	94895201	94880223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
WTC11_00085092	chr8	-	5631	5	FSM	ENSG00000164938.14	ENST00000448464.6	5631	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	15.2212844398888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-94948213	True	NA	-1	True	AATAAA	-17	NA	94949366	94925971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94930729_94932069_94932108_94939859_94940221_94940829_94941092_94949153
WTC11_00085093	chr8	-	5636	4	FSM	ENSG00000164938.14	ENST00000342697.5	5605	4	-31	0	-31	0	multi-exon	FALSE	canonical	3	28	junction_1	22.7596133534821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-94948256	True	NA	-1	True	AATAAA	-17	NA	94949409	94925971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94930729_94939859_94940221_94940829_94941092_94949153
WTC11_00085094	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3.12409987036266	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	-95268752	True	NA	2	True	AGTAAA	-24	NA	95269201	95244912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
WTC11_00085095	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4838	junction_3	704.557702076668	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-96196478	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
WTC11_00085096	chr8	-	518	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	-3	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3063.24414088506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTTTTTGAATTCCAA	-96194152	False	39067	-42	True	AATAAA	-16	NA	96233219	96230935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
WTC11_00085097	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2880.65248685085	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	-96196472	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
WTC11_00085098	chr8	-	695	4	FSM	ENSG00000156467.10	ENST00000523920.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	2715.50560055888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGGGAAAGAAAAGAAAGAG	-96196479	True	NA	NA	False	NA	NA	NA	96235546	96231094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231516_96231773_96231941_96233155_96233228_96235511
WTC11_00085099	chr8	-	750	3	FSM	ENSG00000156467.10	ENST00000519322.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	4838	junction_2	859	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTTGACATTTTAAAAA	-96196478	True	NA	NA	False	NA	NA	NA	96235545	96231296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231941_96233155_96233228_96235511
WTC11_00085100	chr8	-	788	5	FSM	ENSG00000156469.9	ENST00000524341.5	776	5	0	-12	0	7	multi-exon	FALSE	canonical	2	23	junction_1	199.463499167141	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTCTCAACTGATATTG	-96253755	False	NA	-1	True	AATAAA	-21	NA	96257070	96239416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96245859_96245932_96246306_96246455_96250905_96251096_96256961
WTC11_00085101	chr8	-	1448	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	15	0	7	multi-exon	FALSE	canonical	3	372	junction_6	40.5276423681216	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTCTCAACTGATATTG	-96258295	True	NA	-1	True	AATAAA	-21	NA	96261610	96239416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
WTC11_00085102	chr8	-	355	2	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1334	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTACACCTTGAAGGT	NA	False	NA	NA	False	NA	NA	NA	97203409	97177210	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_97177324_97203167
WTC11_00085103	chr8	-	756	2	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	167	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTACACCTTGAAGGT	NA	False	NA	NA	False	NA	NA	NA	97203806	97177210	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_97177744_97203583
WTC11_00085104	chr8	-	4459	1	FSM	ENSG00000180543.5	ENST00000322128.5	4441	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTGGAAGGTTTTTAA	-97277068	True	NA	-18	True	AATAAA	-36	NA	97277928	97273469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_97273500_97277900
WTC11_00085105	chr8	-	1028	1	FSM	ENSG00000287654.1	ENST00000659172.1	516	1	146	-658	146	658	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGACTTATGATTAAAG	-97643701	False	NA	NA	False	AATAAA	-22	NA	97643735	97642707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_97642700_97643700
WTC11_00085107	chr8	-	587	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	-12	0	10	multi-exon	FALSE	canonical	3	6222	junction_1	334.068189978566	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTATTTTTCTCTATTT	-97980465	True	NA	-6	True	AATAAA	-31	NA	98045514	98041708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
WTC11_00085108	chr8	-	452	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	-12	0	10	multi-exon	FALSE	canonical	3	321	junction_2	2517.76716556555	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTATTTTTCTCTATTT	-97980495	True	NA	-6	True	AATAAA	-31	NA	98045544	98041708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
WTC11_00085110	chr8	-	626	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	-12	0	10	multi-exon	FALSE	canonical	3	20	junction_2	2638.42750279404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTATTTTTCTCTATTT	-97980496	True	NA	-6	True	AATAAA	-31	NA	98045545	98041708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
WTC11_00085112	chr8	-	631	3	FSM	ENSG00000156482.11	ENST00000517489.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_2	1459.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCTTTTTAAATCATAA	-97980501	True	NA	NA	False	NA	NA	NA	98045550	98042644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98042776_98044942_98045400_98045507
WTC11_00085116	chr8	-	1005	7	NNC	ENSG00000132541.11	novel	987	6	NA	NA	0	3286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.529566212186	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGGCTGGGTGTGGTGGC	-98113625	True	NA	NA	False	AAAAAG	-3	NA	98117159	98099057	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_98099088_98102343_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
WTC11_00085117	chr8	-	1028	6	FSM	ENSG00000132541.11	ENST00000254878.8	987	6	0	-41	0	41	multi-exon	FALSE	canonical	3	594	junction_3	30.7441051260238	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAACGTATTGCCTAGT	-98113637	True	NA	30	True	NA	NA	NA	98117171	98102302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
WTC11_00085119	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	254.843481376315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	-98113576	True	NA	-106	True	AGTAAA	-2	NA	98117110	98102438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
WTC11_00085121	chr8	-	4499	11	FSM	ENSG00000104361.10	ENST00000430223.7	4402	11	-97	0	61	0	multi-exon	FALSE	canonical	1	1	junction_8	3.71618083521241	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAATGTATTCTTCCCC	-98294309	False	NA	1	True	AATAAA	-20	NA	98294332	98189825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98193091_98194727_98194823_98195941_98196006_98203107_98203197_98205110_98205247_98212404_98212502_98222478_98222601_98236154_98236215_98252462_98252635_98254018_98254088_98294002
WTC11_00085122	chr8	-	605	3	FSM	ENSG00000104361.10	ENST00000519324.1	615	3	0	10	0	-10	multi-exon	FALSE	canonical	3	11	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGAAGATGTTATACTG	-98294087	False	NA	NA	False	AATAAA	-8	NA	98294110	98252206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98252635_98254018_98254088_98294002
WTC11_00085123	chr8	-	2839	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	-6	0	4	multi-exon	FALSE	canonical	3	98	junction_1	19.1373979422491	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTATCTTTGTTAAA	-98823778	True	NA	4	True	AATAAA	-27	NA	98825688	98454626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
WTC11_00085124	chr8	-	1016	2	FSM	ENSG00000253948.3	ENST00000664472.2	1207	2	3	188	2	-188	multi-exon	FALSE	canonical	3	108	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGTGGATTCAGAGTG	-99012698	True	NA	NA	False	AAAAAG	-7	NA	99013036	98996118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98996967_99012868
WTC11_00085126	chr8	-	486	5	NNC	ENSG00000164919.11	novel	744	4	NA	NA	0	44807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1950.36746537672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTAATCCTAGTCTC	-99858401	True	NA	NA	False	NA	NA	NA	99893680	99828392	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_99828436_99878138_99878266_99887489_99887619_99891907_99892053_99893638
WTC11_00085127	chr8	-	799	4	FSM	ENSG00000164919.11	ENST00000520468.7	744	4	27	-82	0	82	multi-exon	FALSE	canonical	3	3495	junction_3	627.169833458211	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAATAACAAGCTAACAG	-99858401	True	NA	83	True	NA	NA	NA	99893680	99877782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893638
WTC11_00085128	chr8	-	433	4	FSM	ENSG00000164919.11	ENST00000297564.6	433	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	2114.56635953779	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACAGTAAGTCTTTCT	-99858405	True	NA	-13	True	AATAAA	-15	NA	99893684	99878147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
WTC11_00085129	chr8	-	572	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	-1	0	0	multi-exon	FALSE	canonical	3	466	junction_3	2027.37800016562	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACAGTAAGTCTTTCT	-99858343	True	NA	-13	True	AATAAA	-15	NA	99893622	99878147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
WTC11_00085130	chr8	-	696	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	-2	0	0	multi-exon	FALSE	canonical	3	359	junction_3	2077.52967621537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858344	True	NA	-14	True	AATAAA	-14	NA	99893623	99878148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
WTC11_00085131	chr8	-	2421	2	FSM	ENSG00000034677.13	ENST00000520903.1	549	2	-50	-1822	-50	-3	multi-exon	FALSE	canonical	3	60	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGGTGTGTACACA	NA	False	NA	-7	True	AATAAA	-21	NA	100260090	100257062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100259247_100259853
WTC11_00085132	chr8	-	4207	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	-21	0	14	multi-exon	FALSE	canonical	3	36	junction_9	12.4225998749988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTTTTTTTTTAATA	-100309425	True	NA	10	True	AATAAA	-38	NA	100309953	100257045	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
WTC11_00085133	chr8	-	3241	5	FSM	ENSG00000186106.11	ENST00000520311.5	3270	5	33	-4	33	0	multi-exon	FALSE	canonical	2	7	junction_4	54.1063767036751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557498	True	NA	-5	True	AATAAA	-21	NA	100559678	100520771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559037
WTC11_00085135	chr8	-	592	3	FSM	ENSG00000186106.11	ENST00000521345.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	67	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTGGCCATGTGGAT	-100557566	True	NA	NA	False	NA	NA	NA	100559746	100529586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100529861_100533208_100533312_100559531
WTC11_00085136	chr8	-	2811	2	FSM	ENSG00000186106.11	ENST00000524319.1	1648	2	514	-1677	397	1677	multi-exon	FALSE	canonical	1	3	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGTGATTTGATTTCTT	-100556949	False	NA	-2	True	ATTAAA	-23	NA	100559129	100548850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100551570_100559037
WTC11_00085137	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_10	750.761506895956	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	-100721423	False	NA	NA	False	NA	NA	NA	100721559	100702050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
WTC11_00085138	chr8	-	3274	15	FSM	ENSG00000070756.17	ENST00000677140.1	3274	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2129.16492205421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	-100721509	False	NA	NA	False	NA	NA	NA	100721645	100702050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715470_100715602_100717772_100717889_100718086_100718281_100721390
WTC11_00085139	chr8	-	3384	15	FSM	ENSG00000070756.17	ENST00000678954.1	3384	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	2128.42058909456	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-100721768	False	NA	NA	False	NA	NA	NA	100721904	100702794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100720804
WTC11_00085140	chr8	-	3278	14	FSM	ENSG00000070756.17	ENST00000677775.1	3278	14	0	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_12	741.474151376677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-100666146	True	NA	NA	False	NA	NA	NA	100722087	100702794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
WTC11_00085141	chr8	-	2877	16	FSM	ENSG00000070756.17	ENST00000520142.2	2877	16	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_15	2031.63262645806	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-100721956	False	NA	NA	False	NA	NA	NA	100722092	100702794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721620_100721728
WTC11_00085143	chr8	-	1092	6	FSM	ENSG00000070756.17	ENST00000520868.5	971	6	0	-121	0	0	multi-exon	FALSE	canonical	3	101	junction_1	3435.40266053341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-100706279	False	NA	NA	False	NA	NA	NA	100706931	100702794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704279_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886
WTC11_00085144	chr8	-	2982	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	-121	0	0	multi-exon	FALSE	canonical	3	6734	junction_10	762.957350293807	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-100666147	True	NA	NA	False	NA	NA	NA	100722088	100702794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
WTC11_00085146	chr8	-	1491	3	FSM	ENSG00000070756.17	ENST00000677285.1	1491	3	0	0	0	0	multi-exon	FALSE	canonical	3	7834	junction_2	938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGTAAAATATAAAAACAAA	-100705043	False	NA	27	True	TTTAAA	-21	NA	100705695	100703137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100704391_100704925_100705057_100705588
WTC11_00085148	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_9	789.861766049893	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	-100722451	False	NA	-7	True	ATTAAA	-35	NA	100722587	100704096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
WTC11_00085153	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	1635.58031291649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	-100951439	False	NA	-13	True	NA	NA	NA	100951449	100918682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
WTC11_00085156	chr8	-	3010	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	-3	0	3	multi-exon	FALSE	canonical	3	629	junction_5	1522.61677384692	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGTCTTTATTTCCA	-100952983	False	7530	-33	True	AATAAA	-14	NA	100952993	100918575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
WTC11_00085157	chr8	-	4104	7	NIC	ENSG00000164924.18	novel	5248	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_6	1613.74436912693	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-100945850	True	NA	-36	True	AATAAA	-11	NA	100953380	100918578	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928_100953058_100953268
WTC11_00085158	chr8	-	3472	8	NIC	ENSG00000164924.18	novel	5248	7	NA	NA	-84	0	intron_retention	FALSE	canonical	3	15	junction_7	1926.48951119249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	NA	False	NA	-36	True	AATAAA	-11	NA	100953472	100918578	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928_100952126_100952849_100953058_100953268
WTC11_00085159	chr8	-	2832	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	-3	0	0	multi-exon	FALSE	canonical	3	307	junction_5	1651.15026572387	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	-100953331	False	NA	-13	True	NA	NA	NA	100953341	100918682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
WTC11_00085168	chr8	-	387	1	FSM	ENSG00000261087.1	ENST00000565617.1	2825	1	2354	84	2354	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGCAGCTGCTGTCT	NA	False	NA	-85	True	NA	NA	NA	101167275	101166888	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101166900_101167300
WTC11_00085169	chr8	-	2677	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	-5	0	5	multi-exon	TRUE	canonical	3	1612	junction_2	39.5979797464467	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTAATTTCTTCTACA	-101191740	True	NA	NA	False	ATTAAA	-23	NA	101205673	101197046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
WTC11_00085170	chr8	-	785	3	FSM	ENSG00000120963.12	ENST00000519744.5	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	788.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATCTGCTGCCTTAG	-101191635	True	NA	NA	False	NA	NA	NA	101205568	101198725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101201606_101201744_101205434
WTC11_00085172	chr8	-	3507	4	FSM	ENSG00000120963.12	ENST00000520347.5	3502	4	0	-5	0	0	multi-exon	FALSE	canonical	3	201	junction_3	685.808687284986	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATAAATGGTTTTAGAA	-101205274	False	NA	NA	False	AATAAA	-25	NA	101205287	101198932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332
WTC11_00085173	chr8	-	965	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	-6	0	0	multi-exon	FALSE	canonical	3	15	junction_4	776.360418877727	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATAAATGGTTTTAGAA	-101205719	False	NA	NA	False	AATAAA	-25	NA	101205732	101198932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
WTC11_00085176	chr8	-	1805	3	FSM	ENSG00000104490.18	ENST00000519508.6	1805	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATACATTCTTGGAACT	NA	False	NA	NA	False	AAAACA	-1	NA	101719648	101688104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101689407_101692790_101692897_101719251
WTC11_00085177	chr8	-	4776	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	-2	0	2	multi-exon	FALSE	canonical	3	574	junction_1	34.6112337254828	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTCTGCAGATAAATA	-102235118	True	NA	-2	True	AATAAA	-20	NA	102238961	102204499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
WTC11_00085179	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	187.933332594301	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-102238747	False	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
WTC11_00085184	chr8	-	10895	59	FSM	ENSG00000104517.13	ENST00000520539.6	10895	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	96.1620415148287	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTTTGGTCTTGTTT	-102398453	True	NA	-27	True	AATAAA	-16	NA	102412700	102252272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
WTC11_00085185	chr8	-	9418	59	FSM	ENSG00000104517.13	ENST00000220959.8	9418	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	98.2132286800137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGATATTAAATGATAT	-102412643	False	NA	NA	False	TATAAA	-34	NA	102412689	102253735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
WTC11_00085186	chr8	-	9193	59	NIC	ENSG00000104517.13	novel	10895	59	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	96.935636061484	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGGGAATAGGGAATT	-102412643	False	NA	-66	True	NA	NA	NA	102412689	102253945	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
WTC11_00085187	chr8	-	9008	59	FSM	ENSG00000104517.13	ENST00000521922.5	9008	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	98.947937883591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGTACCTTAAAGAGAT	-102398512	True	NA	NA	False	TATAAA	-33	NA	102412759	102254197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
WTC11_00085190	chr8	-	3314	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	347	-2	347	0	multi-exon	FALSE	canonical	3	12	junction_3	80.2662236975595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-102650270	False	NA	-5	True	AATAAA	-16	NA	102654028	102648783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
WTC11_00085191	chr8	-	2917	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	-2	0	2	multi-exon	FALSE	canonical	3	162	junction_3	15.5777619273972	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGTCATTGCATTTC	-102651967	True	NA	-3	True	AATAAA	-18	NA	102655725	102648781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
WTC11_00085193	chr8	-	4428	12	FSM	ENSG00000155096.15	ENST00000681985.1	4404	12	0	-24	0	24	multi-exon	FALSE	canonical	1	13	junction_10	489.952586675571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAAATATGGGCATTAA	-102864159	False	NA	-58	True	AATAGA	-26	NA	102864192	102826086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
WTC11_00085194	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	1	642	junction_2	295.241797529185	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	-102832217	True	NA	-11	True	AATAGA	-20	NA	102864163	102826307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
WTC11_00085195	chr8	-	4316	13	FSM	ENSG00000155096.15	ENST00000683787.1	4316	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	606.555318307132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTATTCCTCATGTTT	-102864159	False	NA	-22	True	GATAAA	-1	NA	102864192	102826371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
WTC11_00085200	chr8	-	2897	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	-6	0	3	multi-exon	FALSE	canonical	3	91	junction_5	23.5065002830186	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGATAGATAAATATGC	-103412004	True	NA	5	True	AATAAA	-34	NA	103415107	103398631	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
WTC11_00085202	chr8	-	1307	1	FSM	ENSG00000271830.1	ENST00000606457.1	354	1	-926	-27	-926	27	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTTTAATTTTTTAATT	NA	False	NA	9	True	AATAAA	-43	NA	103482545	103481238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103481200_103482500
WTC11_00085207	chr8	-	4316	9	FSM	ENSG00000154188.10	ENST00000297450.7	4353	9	37	0	37	0	multi-exon	FALSE	canonical	1	8	junction_8	4.789311015167	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAACTTCATTTT	-107497724	True	NA	NA	False	AATAAA	-12	NA	107498018	107249492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321898_107322129_107336149_107336272_107346941_107347098_107497261
WTC11_00085209	chr8	-	2022	13	FSM	ENSG00000104408.11	ENST00000220849.10	2022	13	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_6	229.296432956701	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209453	True	NA	NA	False	NA	NA	NA	108248717	108201215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085210	chr8	-	2216	14	FSM	ENSG00000104408.11	ENST00000678937.1	2216	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1611.03589005747	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209453	True	NA	NA	False	NA	NA	NA	108248717	108201215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108243292_108243464_108248612
WTC11_00085211	chr8	-	2307	12	FSM	ENSG00000104408.11	ENST00000523674.2	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	231.211469874773	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085212	chr8	-	1740	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	-8	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1363.4735314651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTGCATGTGCAAGT	-108209452	True	NA	-17	True	AATAAA	-26	NA	108248716	108201731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
WTC11_00085213	chr8	-	1513	13	FSM	ENSG00000104408.11	ENST00000676706.1	1513	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	1088.64192600485	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTGCATGTGCAAGT	-108209462	True	NA	-17	True	AATAAA	-26	NA	108248726	108201731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236162_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085214	chr8	-	2819	12	FSM	ENSG00000104408.11	ENST00000677501.1	2819	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	1091.67205138201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108204398	False	NA	-28	True	AATAAA	-15	NA	108243662	108201742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292
WTC11_00085215	chr8	-	1161	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	-3	0	0	multi-exon	FALSE	canonical	3	41	junction_3	1255.16619331446	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209455	True	NA	-25	True	AATAAA	-18	NA	108248719	108201739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085216	chr8	-	1504	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	-3	0	0	multi-exon	FALSE	canonical	2	45	junction_1	1087.26798291252	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209466	True	NA	-25	True	AATAAA	-18	NA	108248730	108201739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085217	chr8	-	1126	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	-5	0	0	multi-exon	FALSE	canonical	3	81	junction_8	1223.03213750702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209462	True	NA	-25	True	AATAAA	-18	NA	108248726	108201739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
WTC11_00085218	chr8	-	2952	13	FSM	ENSG00000104408.11	ENST00000677965.1	7938	13	5048	-62	0	0	multi-exon	FALSE	canonical	3	259	junction_12	1022.03652902754	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTGCATGTGCAAGT	-108204398	False	NA	-17	True	AATAAA	-26	NA	108243662	108201731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111
WTC11_00085219	chr8	-	1503	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	-18	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1089.63097728849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTTATCTT	-108209454	True	NA	-44	True	TATAAA	-19	NA	108248718	108201758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
WTC11_00085220	chr8	-	1679	14	FSM	ENSG00000104408.11	ENST00000518345.2	1663	14	0	-16	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1381.88250384679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209466	True	NA	-28	True	AATAAA	-15	NA	108248730	108201742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
WTC11_00085222	chr8	-	2504	12	FSM	ENSG00000104408.11	ENST00000678901.1	2485	12	0	-19	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	237.96499499501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-108209454	True	NA	-79	True	AATAAA	-36	NA	108248718	108201793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085225	chr8	-	2445	7	FSM	ENSG00000104408.11	ENST00000677746.1	2509	7	0	64	0	-64	multi-exon	FALSE	canonical	3	3689	junction_1	212.178122235907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGGTCTTGGAAC	-108209441	True	NA	NA	False	ATTAAA	-39	NA	108248705	108226546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085226	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	1571.52290470104	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	-108209466	True	NA	1	True	ATTAAA	-19	NA	108248730	108230121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00085230	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_5	26.1698180161804	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-109324238	True	NA	NA	False	NA	NA	NA	109334121	109244349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
WTC11_00085232	chr8	-	3968	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	-7	0	7	multi-exon	FALSE	canonical	3	1636	junction_5	79.1758569674532	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATACACTGTCATTTTA	-116738331	True	NA	5	True	AATAAA	-23	NA	116755823	116642122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
WTC11_00085233	chr8	-	1047	3	FSM	ENSG00000147677.12	ENST00000518034.5	1047	3	0	0	0	0	multi-exon	FALSE	canonical	3	1687	junction_2	20	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCATATAGTTTCCAGC	-116738331	True	NA	NA	False	NA	NA	NA	116755823	116658248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_116658981_116726015_116726173_116755665
WTC11_00085236	chr8	-	3692	15	NNC	ENSG00000164754.16	novel	3660	14	NA	NA	0	65391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	285.897735748506	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATAGTGATG	-116864589	True	NA	NA	False	NA	NA	NA	116874776	116780542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_116780577_116845935_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
WTC11_00085241	chr8	-	3397	12	NNC	ENSG00000182197.13	novel	8243	11	NA	NA	0	6467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.8679545695119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTGAACTTAAAGACATA	-118108493	True	NA	NA	False	NA	NA	NA	118111826	117788022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_117788050_117799362_117799898_117804721_117804894_117807216_117807378_117812871_117812962_117818434_117818531_117819675_117819795_117822464_117822598_117830229_117830350_117835443_117835552_117837107_117837202_118110084
WTC11_00085243	chr8	-	2071	2	FSM	ENSG00000182197.13	ENST00000684443.1	2492	2	421	0	421	0	multi-exon	FALSE	canonical	3	131	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAATGACAAAAAAAAAAAG	-117806465	False	NA	0	True	NA	NA	NA	117806481	117799586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_117799898_117804721
WTC11_00085245	chr8	-	855	4	FSM	ENSG00000177570.15	ENST00000314727.9	2186	4	0	1331	0	-1331	multi-exon	FALSE	canonical	3	19	junction_1	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGTACAGTTGTATGG	-118620479	True	NA	NA	False	NA	NA	NA	118621963	118379314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_118379701_118439831_118439962_118580714_118580894_118621803
WTC11_00085248	chr8	-	3122	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	-37	1	-37	0	multi-exon	FALSE	canonical	2	8	junction_7	5.58208941367139	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTTTATTTGGCTT	-119638787	True	NA	-2	True	AATAAA	-16	NA	119638876	119557086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
WTC11_00085251	chr8	-	5186	27	NNC	ENSG00000064313.13	novel	5016	27	NA	NA	0	3	intron_retention	TRUE	non_canonical	0	0	junction_26	40.1448560522469	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTTTGTAGCTTTTT	-119828126	True	NA	1	True	AATAAA	-20	NA	119832841	119730770	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_119732187_119742533_119742657_119744287_119744394_119744880_119745037_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831731_119832480
WTC11_00085255	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	21.8113359288238	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-119849940	True	NA	-34	True	AATAAA	-15	NA	119855894	119833975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
WTC11_00085257	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_4	74.6445279679332	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120436662	True	NA	NA	False	NA	NA	NA	120445150	120395436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
WTC11_00085258	chr8	-	1413	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	5	0	5	0	multi-exon	FALSE	canonical	3	21	junction_4	698.497931278254	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120444834	True	NA	NA	False	NA	NA	NA	120445397	120395436	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
WTC11_00085263	chr8	-	368	1	FSM	ENSG00000239872.1	ENST00000469425.1	329	1	-46	7	-46	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAACTAGTGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	121380511	121380143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_121380100_121380500
WTC11_00085268	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	12.2081939696255	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-123237429	True	NA	-10	True	TATAAA	-43	NA	123241377	123219966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
WTC11_00085271	chr8	-	4181	3	ISM	ENSG00000165156.15	ENST00000395571.8	4899	4	-259	3978	-58	-5	5prime_fragment	FALSE	canonical	3	24	junction_2	2	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGTTTTGGCATGTTC	-123274509	False	36	-5	True	AATAAA	-14	NA	123274545	123252433	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_123256172_123267272_123267387_123274216
WTC11_00085272	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_21	25.8934187739369	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-123390113	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
WTC11_00085273	chr8	-	2485	8	NNC	ENSG00000164983.8	novel	9038	7	NA	NA	42	6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	9.31752791949733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATTTTACTTTCTGCTG	-124372644	False	NA	-9	True	AATAAA	-26	NA	124372659	124306182	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_124307448_124313964_124314062_124320085_124320192_124322104_124322148_124323320_124323376_124327353_124327422_124330747_124330793_124371853
WTC11_00085274	chr8	-	9038	7	FSM	ENSG00000164983.8	ENST00000297632.8	9038	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	5.84997625826141	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGGTTATTTTACTTT	-124371854	True	NA	-15	True	AATAAA	-20	NA	124372701	124306188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124314062_124320085_124320192_124322104_124322148_124323320_124323376_124327353_124327422_124330747_124330793_124371853
WTC11_00085275	chr8	-	918	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	-3	0	0	multi-exon	FALSE	canonical	3	12	junction_8	130.809540181399	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534305	True	NA	80	True	AATAAA	-25	NA	124539088	124488497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
WTC11_00085276	chr8	-	1144	13	FSM	ENSG00000147687.19	ENST00000523214.5	1134	13	0	-10	0	0	multi-exon	FALSE	canonical	2	4	junction_4	147.799108214119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534305	True	NA	80	True	AATAAA	-25	NA	124539088	124488497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
WTC11_00085278	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_11	48.2791469793932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534302	True	NA	80	True	AATAAA	-25	NA	124539085	124488497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
WTC11_00085295	chr8	-	4133	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	6	0	1	multi-exon	FALSE	canonical	2	179	junction_22	41.5632509138856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGTCGTCTCGCTTAT	-125087666	True	NA	-7	True	AGTAAA	-16	NA	125091792	125024265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
WTC11_00085296	chr8	-	4249	27	NNC	ENSG00000164961.16	novel	859	7	NA	NA	19	9118	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_1	66.0582045663712	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTTCTCATTCTAAT	-125087579	True	NA	NA	False	ATTAAA	-12	NA	125091705	125035367	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_125036221_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
WTC11_00085300	chr8	-	2513	2	FSM	ENSG00000168672.4	ENST00000517458.1	844	2	-1312	-357	0	-15	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATTAGAGTTCACTGGA	-126557697	False	232	-21	True	AATAAA	-3	NA	126557731	126552457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_126553504_126556264
WTC11_00085303	chr8	-	2507	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	127	-93	intron_retention	FALSE	canonical	3	67	junction_1	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTTCACTATGTCTTA	-126558317	False	NA	1	True	AATAAA	-26	NA	126558351	126552535	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_126553504_126556264_126557486_126558033
WTC11_00085304	chr8	-	724	2	FSM	ENSG00000249375.8	ENST00000518376.2	907	2	0	183	0	-183	multi-exon	FALSE	canonical	2	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGCATTCATTAAAGTA	-127733954	False	NA	NA	False	NA	NA	NA	127733965	127730339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_127730923_127733824
WTC11_00085306	chr8	-	580	2	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCATCACTCAACTT	NA	False	NA	-11	True	ATTAAA	-20	NA	128617265	128589866	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_128590213_128617031
WTC11_00085309	chr8	-	1952	14	NNC	ENSG00000153310.20	novel	2196	15	NA	NA	0	10251	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	314.41266743531	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATACTGAG	-129926683	True	NA	NA	False	NA	NA	NA	129939746	129829341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_129829375_129841472_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
WTC11_00085311	chr8	-	3800	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	126	-1905	0	1	multi-exon	FALSE	canonical	3	378	junction_12	234.86107004402	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTCATTTGTTGACAC	-129926683	True	NA	-4	True	AATAAA	-19	NA	129939746	129839591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
WTC11_00085313	chr8	-	3709	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	-1892	0	1	multi-exon	FALSE	canonical	3	125	junction_11	325.834910482117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTCATTTGTTGACAC	-130015281	True	NA	-4	True	AATAAA	-19	NA	130016451	129839591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
WTC11_00085317	chr8	-	1969	13	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_10	358.693888372182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-129926734	True	NA	-5	True	AATAAA	-22	NA	129939797	129841469	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129880375_129880459_129903311_129903351_129939607
WTC11_00085318	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	344.202207667693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130016658	False	NA	-5	True	AATAAA	-22	NA	130016672	129841469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
WTC11_00085328	chr8	-	6356	31	FSM	ENSG00000153317.15	ENST00000357668.2	6344	31	0	-12	0	9	multi-exon	TRUE	canonical	2	10	junction_28	23.862779012978	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCATTTTGTGAGTTG	-130442846	True	NA	3	True	AATAAA	-32	NA	130443660	130052094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_130054806_130057953_130058077_130060578_130061070_130076347_130076407_130079901_130079972_130091972_130092144_130112093_130112323_130115627_130115736_130116677_130116746_130116879_130116996_130118160_130118247_130118488_130118676_130124012_130124105_130125955_130126090_130127926_130128091_130134295_130134345_130136950_130137039_130152735_130152806_130159863_130159965_130167535_130167623_130168991_130169068_130179263_130179350_130180750_130180881_130187235_130187286_130188108_130188184_130214555_130214702_130236921_130236995_130358016_130358144_130361669_130361772_130401884_130401971_130443459
WTC11_00085329	chr8	-	1449	11	FSM	ENSG00000153317.15	ENST00000519483.5	1449	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	22.8910462845192	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGACTAGCAAAACGCAG	-130118511	True	NA	NA	False	NA	NA	NA	130118522	130054740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_130054806_130057953_130058077_130060578_130061070_130076347_130076407_130079901_130079972_130112093_130112323_130115627_130115736_130116677_130116746_130116879_130116996_130118160_130118247_130118488
WTC11_00085330	chr8	-	2749	1	FSM	ENSG00000280543.1	ENST00000626977.1	2031	1	-967	249	-967	-249	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCCCAAACATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	130085735	130082986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_130083000_130085700
WTC11_00085339	chr8	-	413	2	FSM	ENSG00000008513.16	ENST00000522204.1	665	2	0	252	0	-252	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCAGACCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	133475934	133465893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_133466091_133475718
WTC11_00085342	chr8	-	393	2	FSM	ENSG00000008513.16	ENST00000522285.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTCCACATGGTTCTG	-133571729	False	NA	NA	False	AATAAA	-24	NA	133571746	133566981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_133567321_133571692
WTC11_00085346	chr8	-	6671	23	FSM	ENSG00000167632.18	ENST00000648948.2	7092	23	52	369	52	-369	multi-exon	FALSE	canonical	0	0	junction_3	15.5637850460188	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATACTTATTTCATG	-140458454	True	NA	NA	False	AATAAA	-6	NA	140458527	139728093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140458280
WTC11_00085351	chr8	-	3050	18	FSM	ENSG00000123908.12	ENST00000523609.5	3050	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	23.6977799611378	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCCGTGTGTTTACAGC	-140635519	False	NA	-151	True	NA	NA	NA	140635546	140531420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140532153_140532415_140532616_140535467_140535570_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140635484
WTC11_00085355	chr8	-	3256	22	FSM	ENSG00000169398.19	ENST00000523539.5	3236	22	0	-20	0	-3	multi-exon	FALSE	canonical	2	5	junction_18	153.328260785661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGGTTCTGTTTC	-140800518	True	NA	-3	True	ATTAAA	-35	NA	140800546	140658384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140762367_140762389_140764233_140764291_140789473_140789527_140793353_140793385_140800458
WTC11_00085367	chr8	-	2028	1	FSM	ENSG00000279786.1	ENST00000623208.1	1816	1	33	-245	33	245	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGTGGATCTCTTG	-140822362	False	NA	NA	False	NA	NA	NA	140822381	140820353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140820400_140822400
WTC11_00085370	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	98	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-140993240	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140879638_140890542_140890770_141001124
WTC11_00085371	chr8	-	1166	5	NIC	ENSG00000169398.19	novel	750	5	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	176.574877884709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTGTGTGTATGTA	-141001152	False	NA	-3	True	AATAAA	-15	NA	141001186	140879163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140879638_140890542_140890770_140925660_140925750_140983841_140984156_141001124
WTC11_00085377	chr8	-	7423	9	FSM	ENSG00000022567.10	ENST00000517878.6	7418	9	0	-5	0	-3	multi-exon	FALSE	canonical	2	4	junction_1	9.96791728496981	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGGTGTGTCTGTCA	-141305686	True	NA	-2	True	AATAAA	-19	NA	141308288	141207168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_141211698_141212196_141212557_141215758_141215971_141217089_141217190_141218010_141219030_141219649_141219830_141221576_141221766_141253988_141254630_141308095
WTC11_00085379	chr8	-	4415	15	NIC	ENSG00000171045.16	novel	1914	12	NA	NA	-19	1020	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	18.1062623060056	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTGTTTTCTGT	-142402847	False	1046	0	True	AATAAA	-36	NA	142402907	142269454	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_142271692_142274780_142274864_142279859_142280325_142284412_142284486_142300485_142300648_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142365910_142366018_142402789
WTC11_00085380	chr8	-	3804	13	NIC	ENSG00000171045.16	novel	1914	12	NA	NA	-3	1020	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	12.5288555831018	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTGTTTTCTGT	-142403125	False	NA	0	True	AATAAA	-36	NA	142403185	142269454	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_142271692_142274780_142274864_142284412_142284486_142300485_142300645_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142403103
WTC11_00085383	chr8	-	2950	3	FSM	ENSG00000198576.4	ENST00000356613.4	2950	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTTCATGTTGTTT	-142614098	True	NA	-10	True	AATAAA	-14	NA	142614479	142611048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_142611858_142612107_142612253_142612483
WTC11_00085384	chr8	-	9116	2	FSM	ENSG00000234616.9	ENST00000612905.2	9097	2	-19	0	2	0	multi-exon	FALSE	canonical	3	11	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCAGGTGTTACTT	-142667933	True	NA	NA	False	AATAAA	-21	NA	142669986	142657459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_142666521_142669931
WTC11_00085387	chr8	-	939	4	FSM	ENSG00000176956.13	ENST00000342752.9	942	4	0	3	0	-3	multi-exon	FALSE	canonical	1	5	junction_3	0.942809041582063	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCCGGGTCTGAGCCT	-143160305	False	NA	NA	False	AATAAA	-16	NA	143160321	143157918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143158486_143158802_143158923_143159581_143159710_143160197
WTC11_00085389	chr8	-	1526	1	FSM	ENSG00000253716.7	ENST00000671046.1	1527	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-143280730	True	NA	-12	True	AATAAA	-20	NA	143281686	143280160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143280200_143281700
WTC11_00085390	chr8	-	375	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	6	667	1	0	multi-exon	FALSE	canonical	3	45	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-143280730	True	NA	-14	True	ATTAAA	-16	NA	143281686	143280827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143280998_143281481
WTC11_00085393	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_13	26.3512909084997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-143328067	True	NA	-3	True	AATAAA	-34	NA	143334880	143309323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
WTC11_00085394	chr8	-	2003	15	FSM	ENSG00000184428.13	ENST00000523676.5	1982	15	0	-21	0	0	multi-exon	FALSE	canonical	2	15	junction_13	106.135766923352	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAGTGCTTGTACA	-143327982	True	NA	17	True	AATAAA	-2	NA	143334795	143309355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334107_143334286_143334739
WTC11_00085395	chr8	-	1998	15	NIC	ENSG00000184428.13	novel	1982	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	109.043709640882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAGTGCTTGTACA	-143328040	True	NA	17	True	AATAAA	-2	NA	143334853	143309355	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143332486_143332602_143334739
WTC11_00085397	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	-8	8	-8	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTGAGATG	-143368354	True	NA	-15	True	NA	NA	NA	143368556	143366638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143366600_143368600
WTC11_00085399	chr8	-	3274	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	-4	0	4	multi-exon	TRUE	canonical	3	229	junction_2	28.0975279051408	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCCTGACTGTTG	-143538677	True	NA	-1	True	AATAAA	-19	NA	143541447	143437654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
WTC11_00085400	chr8	-	1700	14	NNC	ENSG00000147813.16	novel	1682	13	NA	NA	0	10889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.6773423865538	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTTGGGCCTGGATA	-143578298	False	NA	NA	False	NA	NA	NA	143578321	143563895	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_143563923_143574784_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
WTC11_00085402	chr8	-	3265	14	FSM	ENSG00000204839.9	ENST00000398882.8	3265	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	4.40951096860508	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTGGGCATCTGTTTTGA	-143572755	False	NA	-3	True	AATAAA	-17	NA	143572772	143566191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143567466_143567610_143567677_143567785_143567889_143568141_143568262_143568551_143568720_143569440_143569615_143569696_143569841_143569950_143570066_143570242_143570381_143570472_143570658_143570876_143570995_143571666_143571822_143572032_143572186_143572420
WTC11_00085404	chr8	-	1684	13	FSM	ENSG00000147813.16	ENST00000449291.7	1682	13	9	-11	0	11	multi-exon	FALSE	canonical	3	283	junction_8	34.4273591138727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGTGTCGTTTGTTC	-143578298	False	NA	9	True	NA	NA	NA	143578321	143574773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
WTC11_00085405	chr8	-	1888	11	FSM	ENSG00000147813.16	ENST00000435154.7	1877	11	0	-11	0	11	multi-exon	FALSE	canonical	3	283	junction_6	35.258474158704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGTGTCGTTTGTTC	-143578320	False	NA	9	True	NA	NA	NA	143578343	143574773	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
WTC11_00085413	chr8	-	2387	8	FSM	ENSG00000104529.19	ENST00000532741.5	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	1365.23869483602	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143571651	False	NA	-34	True	ATTAAA	-14	NA	143590460	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990
WTC11_00085415	chr8	-	963	8	NIC	ENSG00000104529.19	novel	1249	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	1328.59582158866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578590	True	NA	-34	True	ATTAAA	-14	NA	143597399	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143579825_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
WTC11_00085416	chr8	-	926	8	FSM	ENSG00000104529.19	ENST00000526838.5	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1283.77288346753	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578604	True	NA	-34	True	ATTAAA	-14	NA	143597413	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586853_143597347
WTC11_00085417	chr8	-	923	7	FSM	ENSG00000104529.19	ENST00000528610.5	923	7	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_5	1261.09679996775	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578616	True	NA	-34	True	ATTAAA	-14	NA	143597425	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586853_143597347
WTC11_00085419	chr8	-	2350	10	FSM	ENSG00000104529.19	ENST00000618139.4	2090	10	-260	0	4	0	multi-exon	FALSE	canonical	3	20	junction_9	1800.376071825	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597675	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143592646_143592661_143597347
WTC11_00085420	chr8	-	1249	8	FSM	ENSG00000104529.19	ENST00000395119.7	1249	8	0	0	0	0	multi-exon	FALSE	canonical	3	3023	junction_7	485.30621513533	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597679	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
WTC11_00085421	chr8	-	1284	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	27	0	27	0	multi-exon	FALSE	canonical	3	646	junction_7	1167.88975926494	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597717	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
WTC11_00085422	chr8	-	1629	7	FSM	ENSG00000104529.19	ENST00000530445.6	1621	7	0	-8	0	0	multi-exon	FALSE	canonical	3	3155	junction_5	440.929321622714	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143568755	False	NA	-34	True	ATTAAA	-14	NA	143587564	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728
WTC11_00085423	chr8	-	862	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	-1	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1332.6258565214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578578	True	NA	-34	True	ATTAAA	-14	NA	143597387	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
WTC11_00085424	chr8	-	907	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	-8	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1557.08931755925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578588	True	NA	-34	True	ATTAAA	-14	NA	143597397	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
WTC11_00085425	chr8	-	894	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	-8	0	0	multi-exon	FALSE	canonical	3	646	junction_6	1616.21316663366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578590	True	NA	-34	True	ATTAAA	-14	NA	143597399	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
WTC11_00085426	chr8	-	841	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	-1	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1664.47376568892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578591	True	NA	-34	True	ATTAAA	-14	NA	143597400	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
WTC11_00085433	chr8	-	3320	6	FSM	ENSG00000104524.14	ENST00000495276.6	3342	6	18	4	0	-4	multi-exon	FALSE	canonical	3	145	junction_3	5.38144961882948	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATGTCCAGCCTTTAT	-143599101	False	NA	NA	False	TTTAAA	-33	NA	143609557	143603213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
WTC11_00085437	chr8	-	762	2	FSM	ENSG00000104522.16	ENST00000524719.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143603151	False	NA	-11	True	AATAAA	-17	NA	143613607	143612617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143613296_143613523
WTC11_00085439	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	200.976142862779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607026	True	NA	-11	True	AATAAA	-17	NA	143617482	143612617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
WTC11_00085440	chr8	-	2220	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	51.9974458507339	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607048	True	NA	-11	True	AATAAA	-17	NA	143617504	143612617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
WTC11_00085441	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_10	91.1757094844893	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-11	True	AATAAA	-17	NA	143617549	143612617	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
WTC11_00085450	chr8	-	5640	5	FSM	ENSG00000180921.7	ENST00000388913.4	5632	5	0	-8	0	8	multi-exon	TRUE	canonical	2	4	junction_4	3.11247489949718	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCCAGTGTGTATAAT	-143732807	True	NA	-4	True	AATAAA	-26	NA	143733779	143723924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143728724_143728966_143729092_143729158_143729324_143730135_143730598_143733690
WTC11_00085451	chr8	-	2189	14	FSM	ENSG00000180900.20	ENST00000526832.5	2189	14	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_13	56.1379324131313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTCTGCCTGTCCAT	-143804139	False	NA	-6	True	AATAAA	-16	NA	143804151	143790924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045
WTC11_00085452	chr8	-	5228	37	FSM	ENSG00000180900.20	ENST00000674084.1	5227	37	0	-1	0	1	multi-exon	TRUE	canonical	3	9	junction_8	110.593474792443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGTCCATCCCCCA	-143815306	False	NA	0	True	AATAAA	-22	NA	143815379	143790918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793256_143793341_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
WTC11_00085454	chr8	-	5613	37	FSM	ENSG00000180900.20	ENST00000356994.7	5607	37	0	-6	0	1	multi-exon	FALSE	canonical	3	119	junction_3	94.2442486046853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGTCCATCCCCCA	-143815700	False	NA	0	True	AATAAA	-22	NA	143815773	143790918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791665_143791741_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
WTC11_00085457	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	621.597767952851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828971	False	20809	-28	True	GATAAA	-25	NA	143829026	143816376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
WTC11_00085458	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	588.825959006564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828984	False	20809	-28	True	GATAAA	-25	NA	143829039	143816376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
WTC11_00085459	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_10	613.889371141088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143829248	False	NA	-28	True	GATAAA	-25	NA	143829303	143816376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
WTC11_00085460	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_7	364.01565900384	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143808543	True	NA	-28	True	GATAAA	-25	NA	143829352	143816376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
WTC11_00085463	chr8	-	1820	12	NIC	ENSG00000179950.14	novel	1736	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_11	596.348655576806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143829248	False	NA	-28	True	GATAAA	-25	NA	143829303	143816376	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824397_143829279
WTC11_00085473	chr8	-	3702	13	FSM	ENSG00000185189.18	ENST00000529747.5	3693	13	0	-9	0	3	multi-exon	FALSE	canonical	3	34	junction_1	9.05960202706989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAATTCAACTCTCTT	-143838544	False	NA	NA	False	AATAAA	-29	NA	143840029	143833590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508
WTC11_00085474	chr8	-	3880	17	FSM	ENSG00000185189.18	ENST00000533093.5	3877	17	0	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_1	10.7265368945434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAATTCAACTCTCTT	-143839466	True	NA	NA	False	AATAAA	-29	NA	143840951	143833590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839826_143839928_143840031_143840106_143840230_143840705
WTC11_00085475	chr8	-	3716	18	FSM	ENSG00000185189.18	ENST00000442628.7	3724	18	0	8	0	3	multi-exon	FALSE	canonical	3	20	junction_14	12.7164988326408	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAATTCAACTCTCTT	-143839488	True	NA	NA	False	AATAAA	-29	NA	143840973	143833590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839550_143839735_143839826_143839928_143840031_143840106_143840230_143840705
WTC11_00085478	chr8	-	1782	15	FSM	ENSG00000185189.18	ENST00000532940.5	1782	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.3245263900608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTCCTGAGAGTGGGG	-143838728	False	NA	NA	False	NA	NA	NA	143840213	143835529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143840031_143840106
WTC11_00085480	chr8	-	16005	2	FSM	ENSG00000261150.3	ENST00000615648.2	16005	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTTTTGATTTCAGG	-143877145	True	NA	-17	True	AGTAAA	-13	NA	143878467	143857323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143873299_143878437
WTC11_00085481	chr8	-	14804	32	FSM	ENSG00000178209.17	ENST00000345136.8	14804	32	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_31	16.8038819161101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCCTCCGGCCTTGTG	-143939275	True	NA	-8	True	AATAAA	-16	NA	143939597	143915152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143939349
WTC11_00085482	chr8	-	14689	32	FSM	ENSG00000178209.17	ENST00000357649.6	14689	32	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_31	16.8888143440554	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCCTCCGGCCTTGTG	-143942351	False	NA	-8	True	AATAAA	-16	NA	143942524	143915152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143942391
WTC11_00085484	chr8	-	14649	32	FSM	ENSG00000178209.17	ENST00000356346.7	14683	32	34	0	34	0	multi-exon	FALSE	canonical	2	3	junction_31	16.8038819161101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCCTCCGGCCTTGTG	-143973154	False	NA	-8	True	AATAAA	-16	NA	143973495	143915152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143973402
WTC11_00085487	chr8	-	581	3	FSM	ENSG00000178685.14	ENST00000528963.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCCAATGGCCTCTCC	-143984623	False	NA	NA	False	NA	NA	NA	143984639	143983841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143984105_143984209_143984432_143984543
WTC11_00085489	chr8	-	4020	27	FSM	ENSG00000178814.17	ENST00000618853.5	4020	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_26	14.5564093530801	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	-144059290	True	NA	-3	True	NA	NA	NA	144060692	144051265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052327_144052448_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
WTC11_00085490	chr8	-	635	3	FSM	ENSG00000178814.17	ENST00000527993.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	9	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTCGCAGGGGTGTGT	-144053251	False	NA	NA	False	NA	NA	NA	144054653	144052769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144052901_144052982_144053394_144054560
WTC11_00085492	chr8	-	540	3	FSM	ENSG00000179526.17	ENST00000532536.5	533	3	0	-7	0	7	multi-exon	FALSE	canonical	3	330	junction_2	89.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTGTCTCTGCAGA	-144099054	False	16	5	True	ATTAAA	-27	NA	144099322	144098625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144098995_144099080_144099206_144099276
WTC11_00085493	chr8	-	1403	8	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	330	junction_2	83.5659338853007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144099788	True	NA	-6	True	ATTAAA	-16	NA	144103751	144098636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
WTC11_00085495	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	168.834177795364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103643	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
WTC11_00085504	chr8	-	3653	17	FSM	ENSG00000185000.12	ENST00000528718.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	10.8570253753042	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGGTCAGTCCAGGT	-144325247	True	NA	-4	True	AATACA	-18	NA	144326852	144314583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144319027_144319069_144321320_144321409_144326436
WTC11_00085505	chr8	-	1336	12	FSM	ENSG00000185000.12	ENST00000524965.5	1336	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_9	12.2359718970118	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGTCAATAAAGTGCT	-144317119	False	NA	-36	True	NA	NA	NA	144318724	144316319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144316710_144316852_144316916_144317021_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698
WTC11_00085506	chr8	-	605	3	FSM	ENSG00000185000.12	ENST00000527885.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	6.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGCCTCCTCACTC	-144316028	False	NA	NA	False	NA	NA	NA	144317633	144316842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144316916_144317021_144317253_144317332
WTC11_00085509	chr8	-	1888	8	ISM	ENSG00000182325.11	ENST00000455319.6	1727	9	0	84	0	0	intron_retention	FALSE	canonical	3	53	junction_6	119.377466851315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTCAGCCAGCTTGCC	-144354447	True	NA	-90	True	NA	NA	NA	144358472	144355514	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357456_144357503_144357627
WTC11_00085510	chr8	-	2007	5	FSM	ENSG00000182325.11	ENST00000524492.5	2007	5	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	16.0058583025091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	-144353948	False	NA	-6	True	AATAAA	-13	NA	144357973	144355430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807
WTC11_00085511	chr8	-	1746	9	FSM	ENSG00000182325.11	ENST00000331890.6	1745	9	0	-1	0	1	multi-exon	FALSE	canonical	3	214	junction_6	77.2640561645582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGTGGTCCTCA	-144354447	True	NA	-5	True	AATAAA	-14	NA	144358472	144355429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357438_144357503_144357627_144357787_144358031
WTC11_00085512	chr8	-	1728	9	FSM	ENSG00000182325.11	ENST00000455319.6	1727	9	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_6	115.838249296163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGTGGTCCTCA	-144354447	True	NA	-5	True	AATAAA	-14	NA	144358472	144355429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357456_144357503_144357627_144357787_144358031
WTC11_00085513	chr8	-	2348	6	ISM	ENSG00000182325.11	ENST00000331890.6	1745	9	0	84	0	0	intron_retention	FALSE	canonical	3	340	junction_5	26.8372874933366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTCAGCCAGCTTGCC	-144354447	True	NA	-90	True	NA	NA	NA	144358472	144355514	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989
WTC11_00085520	chr8	-	4462	37	FSM	ENSG00000071894.17	ENST00000620219.4	4462	37	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_27	67.9097076643813	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGTGGATGCCGTCACCA	-144403736	True	NA	-91	True	NA	NA	NA	144409288	144393317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014
WTC11_00085524	chr8	-	684	5	FSM	ENSG00000147804.10	ENST00000527148.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.4354497343366	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCTCTCTAGGAAGCTT	-144412857	True	NA	NA	False	NA	NA	NA	144413571	144409741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144409922_144412562_144412667_144412758_144412947_144413236_144413390_144413512
WTC11_00085525	chr8	-	2528	3	FSM	ENSG00000147804.10	ENST00000529462.5	2778	3	0	250	0	-250	multi-exon	FALSE	canonical	3	69	junction_1	3	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGCTGGGGGACGGTA	-144412871	True	NA	NA	False	NA	NA	NA	144413585	144410644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144412947_144413236_144413390_144413512
WTC11_00085526	chr8	-	498	3	FSM	ENSG00000147804.10	ENST00000530807.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	31.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412855	True	NA	-5	True	AGTAAA	-19	NA	144413569	144412413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144412667_144412758_144412947_144413512
WTC11_00085528	chr8	-	798	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	0	-3	0	2	multi-exon	FALSE	canonical	3	69	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGTGCTCTCCTTGCT	-144412877	True	NA	-3	True	AGTAAA	-21	NA	144413591	144412411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144412667_144412758_144412947_144413236
WTC11_00085530	chr8	-	908	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	-16	0	0	multi-exon	FALSE	canonical	3	277	junction_5	35.3022662162077	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTGCCCTGTGTAT	-144422915	False	NA	-6	True	AATAAA	-34	NA	144426983	144423600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
WTC11_00085532	chr8	-	1026	8	FSM	ENSG00000160948.14	ENST00000529182.5	1010	8	0	-16	0	0	multi-exon	FALSE	canonical	3	277	junction_4	37.7132034476749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTGCCCTGTGTAT	-144422915	False	NA	-6	True	AATAAA	-34	NA	144426983	144423600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
WTC11_00085534	chr8	-	2344	5	FSM	ENSG00000160948.14	ENST00000530983.5	2337	5	0	-7	0	3	multi-exon	FALSE	canonical	3	298	junction_3	21.004463811295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGGCTCCCCCAGGC	-144422915	False	NA	-19	True	AATAAA	-21	NA	144426983	144423613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424820_144424945_144426209_144426908
WTC11_00085537	chr8	-	1609	7	FSM	ENSG00000160948.14	ENST00000527797.6	1609	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	21.6544837543329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAACTTTGGGGGCCGG	-144422930	False	NA	-77	True	NA	NA	NA	144426998	144423671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144425773_144426025_144426064_144426179_144426209_144426908
WTC11_00085538	chr8	-	861	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	-19	-192	-4	0	multi-exon	FALSE	canonical	3	31	junction_5	107.337474040213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAACTTTGGGGGCCGG	-144424499	True	NA	-77	True	NA	NA	NA	144428567	144423671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
WTC11_00085540	chr8	-	6607	17	FSM	ENSG00000160949.18	ENST00000497613.2	6607	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_14	59.0261793084221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-144434691	False	NA	-8	True	AATAAA	-15	NA	144442856	144428774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717
WTC11_00085541	chr8	-	4543	26	FSM	ENSG00000160949.18	ENST00000409379.8	4531	26	0	-12	0	12	multi-exon	FALSE	canonical	3	167	junction_18	61.0777340771578	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCTGCCTGGCAGGCGG	-144436275	True	NA	4	True	AATAAA	-27	NA	144444440	144428762	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
WTC11_00085542	chr8	-	2225	4	FSM	ENSG00000187954.13	ENST00000530374.6	2229	4	0	4	0	-4	multi-exon	TRUE	canonical	3	116	junction_1	50.81338406365	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTTTAGTGAGAAAGAG	-144462652	False	NA	-2	True	ATTAAA	-28	NA	144462871	144449585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144450771_144452358_144452571_144453221_144453461_144462282
WTC11_00085543	chr8	-	7179	2	FSM	ENSG00000187954.13	ENST00000533173.1	6158	2	-1021	0	-1021	0	multi-exon	FALSE	canonical	3	239	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	-144458730	False	NA	0	True	AATAAA	-24	NA	144458949	144451119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144452571_144453221
WTC11_00085545	chr8	-	1473	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	-198	-59	-23	51	multi-exon	FALSE	canonical	3	55	junction_2	33	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACAGTAGTCAGT	-144465471	True	NA	51	True	NA	NA	NA	144465690	144463765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808_144465097_144465352
WTC11_00085546	chr8	-	1729	2	FSM	ENSG00000187954.13	ENST00000403000.6	1477	2	-201	-51	-23	51	multi-exon	FALSE	canonical	3	121	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACAGTAGTCAGT	-144465471	True	NA	51	True	NA	NA	NA	144465690	144463765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808
WTC11_00085547	chr8	-	1255	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	-42	-51	-23	51	multi-exon	FALSE	canonical	3	27	junction_2	47	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACAGTAGTCAGT	-144465471	True	NA	51	True	NA	NA	NA	144465690	144463765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808_144465097_144465570
WTC11_00085548	chr8	-	1590	3	FSM	ENSG00000187954.13	ENST00000533764.5	853	3	-271	-466	-38	8	multi-exon	TRUE	canonical	0	0	junction_2	60.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGAGGGATTGAGGGA	-144465486	True	NA	8	True	AATAAA	-37	NA	144465705	144463808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808_144465097_144465207
WTC11_00085552	chr8	-	1912	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	6	-1426	6	-35	multi-exon	FALSE	canonical	3	181	junction_2	417.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTCTGCCAGCAGAGACC	-144463730	True	NA	NA	False	NA	NA	NA	144475817	144473446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144475057_144475156_144475224_144475582
WTC11_00085553	chr8	-	3819	21	FSM	ENSG00000160957.15	ENST00000617875.6	3819	21	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_20	71.0939343404204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-144512940	True	NA	-15	True	AATAAA	-21	NA	144517833	144511287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
WTC11_00085554	chr8	-	3896	20	FSM	ENSG00000160957.15	ENST00000621189.4	3896	20	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_15	58.0834722678708	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-144512952	True	NA	-15	True	AATAAA	-21	NA	144517845	144511287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
WTC11_00085561	chr8	-	2530	4	NNC	ENSG00000213563.7	novel	1637	4	NA	NA	0	-44	intron_retention	FALSE	canonical	3	38	junction_3	75.7070376884181	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAAGACAGGACACCT	-144526166	True	NA	NA	False	NA	NA	NA	144529062	144525776	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144527788_144528023_144528073_144528267_144528436_144528760
WTC11_00085562	chr8	-	2644	3	FSM	ENSG00000213563.7	ENST00000524821.6	2455	3	19	-208	0	208	multi-exon	FALSE	canonical	3	188	junction_2	9	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGGCGTGTCTGCCCAG	-144526196	True	NA	NA	False	NA	NA	NA	144529092	144525524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144527788_144528023_144528073_144528760
WTC11_00085563	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	39.3474550920669	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
WTC11_00085568	chr8	-	4879	12	FSM	ENSG00000147799.12	ENST00000377307.7	4830	12	-38	-11	-38	11	multi-exon	FALSE	canonical	3	38	junction_5	8.06891802018889	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTGTGGGCGCGGCCG	NA	False	NA	11	True	AATAAA	-28	NA	144685884	144529167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144530617_144530701_144530872_144532304_144532397_144533125_144533326_144534128_144534203_144537720_144537814_144545248_144545811_144547126_144548490_144555559_144555644_144580845_144581278_144605534_144605696_144685685
WTC11_00085569	chr8	-	261	1	FSM	ENSG00000254533.1	ENST00000525376.1	572	1	346	-35	346	35	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTAAGAAAGCTCTAGAT	NA	False	NA	NA	False	ATTAAA	-7	NA	144698839	144698578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144698600_144698800
WTC11_00085572	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.1464281994822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	-144755107	True	NA	1	True	AATATA	-22	NA	144755441	144753453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
WTC11_00085574	chr8	-	2803	6	FSM	ENSG00000196378.13	ENST00000429371.7	2808	6	0	5	0	-5	multi-exon	FALSE	canonical	3	37	junction_5	20.5562642520474	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATCTGTGTTTCTTTCT	-144787296	False	2180	-5	True	CATAAA	-15	NA	144787317	144772228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780227_144780281_144787278
WTC11_00085579	chr8	-	698	5	FSM	ENSG00000161016.18	ENST00000531975.5	698	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	13945.6670578176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCCACCCCCATGG	-144792012	False	NA	-16	True	AATAAA	-20	NA	144792057	144789765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791873_144791991
WTC11_00085580	chr8	-	718	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	-1	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	10267.8600280465	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	-144791914	False	NA	-17	True	AATAAA	-19	NA	144791959	144789766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
WTC11_00085581	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_5	12049.3929042089	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615242	True	NA	-19	True	AATAAA	-17	NA	144792389	144789768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
WTC11_00085582	chr8	-	1070	5	FSM	ENSG00000161016.18	ENST00000528957.6	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	9176.78943040539	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615243	True	NA	-19	True	AATAAA	-17	NA	144792390	144789768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991
WTC11_00085583	chr8	-	1042	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	-1	0	0	multi-exon	FALSE	canonical	3	9348	junction_5	9970.84211087509	4088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144792542	False	NA	-19	True	AATAAA	-17	NA	144792587	144789768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
WTC11_00085587	chr8	-	1437	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	-7	0	-2	multi-exon	FALSE	canonical	3	232	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGATGGCGTGTGATG	-144850440	True	NA	-7	True	AATAAA	-27	NA	144853048	144850168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144852838
WTC11_00085588	chr8	-	1896	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	-391	-656	0	-2	multi-exon	FALSE	canonical	2	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGATGGCGTGTGATG	-144850440	True	NA	-7	True	AATAAA	-27	NA	144853048	144850168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144852379
WTC11_00085589	chr8	-	1293	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	9	3	9	-2	multi-exon	FALSE	canonical	3	103	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGATGGCGTGTGATG	-144850450	True	NA	-7	True	AATAAA	-27	NA	144853058	144850168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144852992
WTC11_00085590	chr8	-	1560	2	FSM	ENSG00000170619.10	ENST00000543949.2	1571	2	9	2	9	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGATGGCGTGTGATG	-144850450	True	NA	-7	True	AATAAA	-27	NA	144853058	144850168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144852725
WTC11_00085592	chr8	-	3031	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	-239	-2199	-183	2199	multi-exon	FALSE	canonical	3	8	junction_1	27.9049726751344	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGCTTCACACTCAGCA	-144901582	False	NA	NA	False	NA	NA	NA	144901662	144880406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
WTC11_00085595	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144932404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144932591_144945912_144946216_144950796
WTC11_00085600	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	14	junction_1	3.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-145001737	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144996608_144999602_144999770_145002816
WTC11_00085602	chr8	+	1663	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTTAAAAACCAGAATCTA	NA	False	NA	NA	False	NA	NA	NA	632466	634129	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_632500_634100
WTC11_00085603	chr8	+	231	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAGGAGAGAGAGAGA	NA	False	NA	NA	False	AAGAAA	-25	NA	7147485	7147716	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7147500_7147700
WTC11_00085604	chr8	+	872	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTAGGAACCACCCAA	NA	False	NA	NA	False	NA	NA	NA	7155395	7156267	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7155400_7156300
WTC11_00085605	chr8	+	3022	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCCCTAGGTGCGCATT	NA	False	NA	NA	False	NA	NA	NA	7156276	7159298	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7156300_7159300
WTC11_00085606	chr8	+	202	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACGTCCCAATTCTTC	NA	False	NA	NA	False	NA	NA	NA	7403928	7404130	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7403900_7404100
WTC11_00085607	chr8	+	3966	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCCTTGTCCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	8136324	8140290	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8136300_8140300
WTC11_00085608	chr8	+	1770	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACACACAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	11166142	11167912	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_11166100_11167900
WTC11_00085609	chr8	+	5523	1	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGCATGGTGATGTGCA	NA	False	NA	NA	False	NA	NA	NA	12523840	12529363	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12523800_12529400
WTC11_00085610	chr8	+	5437	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	12583743	12589180	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12583700_12589200
WTC11_00085611	chr8	+	287	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	16142047	16142334	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_16142000_16142300
WTC11_00085612	chr8	+	1983	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCACGCCACT	22256204	False	NA	NA	False	NA	NA	NA	22256215	22258198	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_22256200_22258200
WTC11_00085613	chr8	+	274	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACCTGTCTTTACTATC	NA	False	NA	NA	False	NA	NA	NA	25183237	25183511	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_25183200_25183500
WTC11_00085614	chr8	+	299	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTATTCCTAGAAGACATA	NA	False	NA	NA	False	NA	NA	NA	26290873	26291172	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_26290900_26291200
WTC11_00085615	chr8	+	1087	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAGGAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	35523578	35524665	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_35523600_35524700
WTC11_00085616	chr8	+	326	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCTTTTATTGTGGGA	NA	False	NA	NA	False	NA	NA	NA	46469694	46470020	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_46469700_46470000
WTC11_00085617	chr8	+	338	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCATTTTCTCCACCTTC	NA	False	NA	29	True	AATAAA	-34	NA	54455326	54455664	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_54455300_54455700
WTC11_00085618	chr8	+	327	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTCTTAATCTCCCCG	NA	False	NA	NA	False	NA	NA	NA	55847655	55847982	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_55847700_55848000
WTC11_00085619	chr8	+	224	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTCATTGAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	69690076	69690300	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_69690100_69690300
WTC11_00085621	chr8	+	238	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGGGTGGGGGCAAAT	NA	False	NA	NA	False	AGTAAA	-12	NA	79387385	79387623	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79387400_79387600
WTC11_00085622	chr8	+	631	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACGCAAGGAAATAAGGG	NA	False	NA	NA	False	NA	NA	NA	79390026	79390657	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79390000_79390700
WTC11_00085625	chr8	+	225	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCTGAAAAAAAAATTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	95586794	95587019	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_95586800_95587000
WTC11_00085626	chr8	+	493	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCGGACATAATTCCT	NA	False	NA	NA	False	NA	NA	NA	97204774	97205267	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_97204800_97205300
WTC11_00085627	chr8	+	407	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTCAAATCAGCCAAGCA	NA	False	NA	NA	False	NA	NA	NA	99947878	99948285	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_99947900_99948300
WTC11_00085628	chr8	+	1570	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTATCCTCAAGGAAATA	104288440	False	NA	NA	False	NA	NA	NA	104288456	104290026	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_104288500_104290000
WTC11_00085631	chr8	+	1107	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGTCTAGGGCTGTAA	NA	False	NA	NA	False	AATAAA	-34	NA	113512144	113513251	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_113512100_113513300
WTC11_00085638	chr8	+	205	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAACTTTTAATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	127711159	127711364	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_127711200_127711400
WTC11_00085641	chr8	+	3875	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGATCTTGCTCTACAG	NA	False	NA	NA	False	NA	NA	NA	142332431	142336306	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_142332400_142336300
WTC11_00085642	chr8	+	282	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCTCAGTGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	143906484	143906766	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_143906500_143906800
WTC11_00085645	chr8	+	1349	1	FSM	ENSG00000272812.1	ENST00000609090.1	574	1	-678	-97	-678	97	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTTTTAATCAATATG	232346	True	NA	NA	False	NA	NA	NA	232440	233789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_232400_233800
WTC11_00085646	chr8	+	2222	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	138	0	-9	0	multi-exon	FALSE	canonical	3	5	junction_3	21.821720830402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	406097	True	NA	NA	False	AATAAA	-20	NA	406945	469871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
WTC11_00085647	chr8	+	9811	11	FSM	ENSG00000198010.13	ENST00000612087.1	10088	11	2	275	2	-275	multi-exon	FALSE	canonical	0	0	junction_10	1.84661853126194	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAATTAAATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	1501367	1708199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1501432_1548625_1549684_1565682_1565895_1626739_1626888_1632826_1633047_1668328_1668679_1676532_1676619_1678213_1678630_1691534_1691627_1697146_1697300_1701187
WTC11_00085648	chr8	+	809	2	FSM	ENSG00000182372.10	ENST00000524258.2	835	2	26	0	16	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACCATCTCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	1755803	1771461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1756083_1770931
WTC11_00085650	chr8	+	5505	28	NIC	ENSG00000104728.16	novel	5648	29	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	51.2939028723618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGGATGAGTTGCCTCT	NA	False	NA	28	True	AATAAA	-20	NA	1823946	1958639	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898435_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00085651	chr8	+	5429	27	NIC	ENSG00000104728.16	novel	5472	28	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	48.2790826599388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	NA	False	NA	30	True	AATAAA	-22	NA	1823946	1958641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
WTC11_00085652	chr8	+	4647	7	ISM	ENSG00000104728.16	ENST00000520359.5	5472	28	0	85599	0	1911	5prime_fragment	FALSE	canonical	3	55	junction_4	21.5979680114177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGGAGTCCAGCCGTC	1823960	True	NA	NA	False	NA	NA	NA	1823987	1873042	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193
WTC11_00085653	chr8	+	1197	1	FSM	ENSG00000254244.1	ENST00000517543.1	1253	1	186	-130	186	130	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTAGATCCATACTA	NA	False	NA	NA	False	AATAAA	-19	NA	4787517	4788714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_4787500_4788700
WTC11_00085654	chr8	+	428	2	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGGAGAAACCACTTGC	NA	False	NA	NA	False	AAAAAG	-26	NA	7402635	7408262	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7402888_7408086
WTC11_00085655	chr8	+	782	1	FSM	ENSG00000284617.1	ENST00000641758.1	218	1	-149	-415	-149	415	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGTAACGCCGGGAA	NA	False	NA	NA	False	NA	NA	NA	7611323	7612105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7611300_7612100
WTC11_00085656	chr8	+	434	2	Antisense	novelGene_ENSG00000284655.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCCCTTCGTCGCGTCC	NA	False	NA	NA	False	NA	NA	NA	7678943	7686374	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_7679166_7686162
WTC11_00085657	chr8	+	216	1	FSM	ENSG00000284603.1	ENST00000642045.1	216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGCGGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	8059458	8059674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8059500_8059700
WTC11_00085658	chr8	+	2083	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-146	-83396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACACACACAAACACACACA	8065476	False	NA	NA	False	NA	NA	NA	8065499	8097131	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8067568_8097116
WTC11_00085659	chr8	+	894	7	FSM	ENSG00000173295.9	ENST00000523992.2	894	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.2101144805335	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCCACCCCAGCCT	8228372	True	NA	NA	False	NA	NA	NA	8228604	8237275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8228701_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125
WTC11_00085660	chr8	+	544	3	ISM	ENSG00000248538.9	ENST00000517816.1	826	4	-74	11824	22	-47	5prime_fragment	FALSE	canonical	2	5	junction_2	6.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTCTATGCTGTAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	9151717	9156312	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_9151917_9154965_9155150_9156151
WTC11_00085661	chr8	+	559	1	FSM	ENSG00000279949.1	ENST00000623764.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCATTTGTTATAAAGGCT	9158046	False	NA	NA	False	AATAAA	-16	NA	9158062	9158621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9158100_9158600
WTC11_00085663	chr8	+	2423	1	FSM	ENSG00000270076.1	ENST00000602443.1	707	1	-1722	6	-1722	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTAGAAAATAGGTGCAA	11201206	False	NA	6	True	AATAAA	-19	NA	11201242	11203665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11201200_11203700
WTC11_00085665	chr8	+	2125	5	NIC	ENSG00000154328.16	novel	2226	5	NA	NA	24	-6	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	71.596089278675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTACTCGCTGTTTTTGT	11768267	True	NA	6	True	AATAAA	-6	NA	11769733	11787334	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_11769792_11771445_11771591_11779597_11779951_11783202_11783400_11785962
WTC11_00085666	chr8	+	2420	9	FSM	ENSG00000079459.13	ENST00000615631.4	2462	9	42	0	42	0	multi-exon	FALSE	canonical	2	136	junction_1	1286.96881639572	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	11795592	False	NA	17	True	AATAAA	-25	NA	11795614	11839304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11796012_11802758_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00085667	chr8	+	2229	8	FSM	ENSG00000079459.13	ENST00000528812.5	2013	8	-337	121	32	0	multi-exon	FALSE	canonical	3	101	junction_1	1368.98657586477	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	11757428	True	NA	NA	False	NA	NA	NA	11802674	11838839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
WTC11_00085668	chr8	+	1569	1	FSM	ENSG00000270074.1	ENST00000602981.1	1547	1	-47	25	-47	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGACCCACTGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	12412779	12414348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12412800_12414300
WTC11_00085670	chr8	+	1499	11	NIC	ENSG00000104723.21	novel	3697	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	109.528489444528	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	15535972	True	NA	4	True	AATAAA	-19	NA	15540272	15758277	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758029
WTC11_00085671	chr8	+	3882	14	NIC	ENSG00000155970.12	novel	3990	15	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	7.99556089857617	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTACTTGGCTTTTATAT	17025436	True	NA	NA	False	AATAAA	-26	NA	17027250	17122643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17027661_17064083_17064238_17069687_17069720_17077782_17077862_17081692_17081741_17085235_17085319_17086963_17087036_17090545_17090585_17104390_17104492_17105412_17105585_17114092_17114202_17116442_17116601_17118706_17118776_17120287
WTC11_00085672	chr8	+	1130	1	FSM	ENSG00000279903.1	ENST00000623580.1	594	1	-858	322	-858	-322	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACATGTGCTGGACAT	17497814	False	NA	NA	False	AATACA	-29	NA	17499153	17500283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17499200_17500300
WTC11_00085674	chr8	+	6472	39	NNC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_29	86.0656717948326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17914778	True	NA	15	True	AATAAA	-26	NA	17922989	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006250_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085675	chr8	+	6646	41	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	101.116365515183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17914778	True	NA	15	True	AATAAA	-26	NA	17922989	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17934705_17934859_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17983232_17983290_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085676	chr8	+	8743	40	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	86.6817389412425	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAATTGTATTTTCTTT	17914778	True	NA	19	True	AATAAA	-19	NA	17922989	18029948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085677	chr8	+	8399	37	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	90.8599349426235	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTATTTTCTTTTAAATT	17914778	True	NA	25	True	AATAAA	-25	NA	17922989	18029954	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085678	chr8	+	6246	38	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_23	79.3259956543852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTAGTTTGA	17914816	False	NA	4	True	AATAAA	-15	NA	17923027	18027747	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085679	chr8	+	6351	39	NNC	ENSG00000078674.19	novel	6443	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_29	94.8724650572482	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTAGTTTGA	17914816	False	NA	4	True	AATAAA	-15	NA	17923027	18027747	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006250_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085680	chr8	+	6001	36	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	14156	45	8	0	3prime_fragment	FALSE	canonical	3	102	junction_25	82.015011070025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17937124	False	NA	15	True	AATAAA	-26	NA	17937183	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085681	chr8	+	5033	10	ISM	ENSG00000078674.19	ENST00000522275.5	2379	18	29980	0	-3491	0	3prime_fragment	FALSE	canonical	3	289	junction_1	46.5135052736246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTAGTTTGA	18002550	False	NA	4	True	AATAAA	-15	NA	18002562	18027747	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085682	chr8	+	8989	9	NIC	ENSG00000078674.19	novel	2379	18	NA	NA	-2095	2	intron_retention	FALSE	canonical	3	335	junction_1	40.8472765310002	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTGTATTTTCTTTTA	NA	False	NA	21	True	AATAAA	-21	NA	18003958	18029950	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00085683	chr8	+	1304	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	-19	0	-19	0	multi-exon	FALSE	canonical	1	1	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	18391235	True	NA	7	True	AATAAA	-17	NA	18391262	18401218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18391346_18399997
WTC11_00085687	chr8	+	568	6	FSM	ENSG00000158806.14	ENST00000522813.5	565	6	-3	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	4.66476151587624	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAAGAGGAAGAGGA	22023913	True	NA	NA	False	NA	NA	NA	22024133	22034155	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22024258_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108
WTC11_00085688	chr8	+	1490	10	FSM	ENSG00000158806.14	ENST00000518119.6	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.42216638714053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22023913	True	NA	NA	False	AATAAA	-16	NA	22024133	22036897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22024624_22024723_22024831_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
WTC11_00085689	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	22042763	False	NA	5	True	AATAAA	-17	NA	22042819	22048809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
WTC11_00085690	chr8	+	2671	16	FSM	ENSG00000168487.20	ENST00000306349.13	2506	16	-171	6	14	-6	multi-exon	FALSE	canonical	2	3	junction_15	10.4783374423405	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTCTGCTTGTCCAT	22164799	True	NA	-4	True	AGTAAA	-30	NA	22165200	22201476	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201117
WTC11_00085692	chr8	+	642	5	FSM	ENSG00000120896.14	ENST00000523402.5	889	5	1	246	1	-246	multi-exon	FALSE	canonical	1	1	junction_3	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCAGCCCCGCCTGGCTTT	22554441	False	NA	NA	False	GGGGCT	-6	NA	22554451	22561443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22554609_22554862_22554981_22556714_22556909_22558128_22558193_22561334
WTC11_00085693	chr8	+	1517	10	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	157.469573780673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22578755	False	NA	15	True	AATAAA	-1	NA	22579141	22594298	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22579210_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
WTC11_00085694	chr8	+	1534	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	-20	-23	0	0	multi-exon	FALSE	canonical	1	2	junction_1	157.861714762175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATAAAGTAGATGTCC	22578743	True	NA	5	True	TATAAA	-14	NA	22579129	22594288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
WTC11_00085695	chr8	+	2108	8	NIC	ENSG00000248235.6	novel	977	5	NA	NA	0	2049	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	134.333122330652	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22585514	True	NA	9	True	ATTAAA	-6	NA	22589273	22604133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22589375_22589595_22589742_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
WTC11_00085696	chr8	+	2132	8	NIC	ENSG00000248235.6	novel	977	5	NA	NA	0	2049	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	134.127566449379	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22585514	True	NA	9	True	ATTAAA	-6	NA	22589273	22604133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22589375_22589595_22589742_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
WTC11_00085697	chr8	+	3049	5	NIC	ENSG00000241852.11	novel	2021	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	46	junction_4	40.6286536818536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22598453	True	NA	9	True	ATTAAA	-6	NA	22599610	22604133	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22603194
WTC11_00085700	chr8	+	2179	5	FSM	ENSG00000158941.17	ENST00000520536.1	2173	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	820	junction_2	49.6462485994662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGTTCAGGGCCTCTC	22618082	False	NA	NA	False	NA	NA	NA	22618150	22620964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
WTC11_00085701	chr8	+	1231	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	11	0	11	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	23084212	True	NA	12	True	AATAAA	-27	NA	23084365	23103558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
WTC11_00085702	chr8	+	581	6	FSM	ENSG00000284956.1	ENST00000520607.1	581	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	80.4502330636773	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAGACACAGTGTGTCA	23084249	True	NA	NA	False	CATAAA	-16	NA	23084402	23115536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23111719_23111826_23114656_23114771_23115507
WTC11_00085703	chr8	+	653	3	NIC	ENSG00000246582.3	novel	1239	2	NA	NA	353	124	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCAAATGTTATTTTTT	23224728	False	NA	NA	False	AATAAA	-24	NA	23224823	23228331	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_23224892_23225804_23226124_23228065
WTC11_00085704	chr8	+	3928	12	Fusion	ENSG00000147457.14_ENSG00000246582.3	novel	3367	10	NA	NA	0	0	multi-exon	FALSE	canonical	3	28	junction_2	105.142720791965	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	23225271	False	NA	4	True	ATTAAA	-11	NA	23225478	23261992	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_23226124_23228065_23228154_23246255_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
WTC11_00085707	chr8	+	4730	5	NNC	ENSG00000147454.14	novel	4672	4	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.39773129383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23526253	True	NA	16	True	AATAAA	-16	NA	23528865	23575463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334_23572204_23572235
WTC11_00085710	chr8	+	454	5	FSM	ENSG00000042980.13	ENST00000518326.1	684	5	0	230	0	-173	multi-exon	FALSE	canonical	1	1	junction_1	0.707106781186548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACTATATAGTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	24341651	24351310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24341758_24343100_24343182_24343505_24343585_24349863_24349973_24351231
WTC11_00085711	chr8	+	2451	3	FSM	ENSG00000104722.14	ENST00000433454.3	2519	3	68	0	68	0	multi-exon	FALSE	canonical	2	12	junction_1	76.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTCTTATGTCATT	24914883	True	NA	17	True	AATAAA	-24	NA	24915009	24919098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24915298_24915604_24915730_24917060
WTC11_00085712	chr8	+	2251	2	ISM	ENSG00000104722.14	ENST00000433454.3	2519	3	570	5	570	0	3prime_fragment	FALSE	canonical	3	165	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24915258	True	NA	12	True	AATAAA	-19	NA	24915511	24919093	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_24915730_24917060
WTC11_00085713	chr8	+	490	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTATGTATGGAGAAGA	24956568	False	NA	8	True	AATAAA	-19	NA	24956620	24957110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24956600_24957100
WTC11_00085714	chr8	+	1788	2	FSM	ENSG00000147459.18	ENST00000521405.1	1836	2	48	0	48	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTCCTCTTGATTGTG	NA	False	NA	NA	False	AATACA	-22	NA	25409479	25412258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25410203_25411193
WTC11_00085715	chr8	+	3342	15	NNC	ENSG00000184661.14	novel	922	7	NA	NA	-197	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.2009666959989	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGAACCTACTTTTAT	25458445	True	NA	23	True	AATAAA	-11	NA	25459001	25507861	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_25459149_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
WTC11_00085717	chr8	+	737	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_1	402.341645868284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	26383278	True	NA	NA	False	NA	NA	NA	26383416	26410509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
WTC11_00085718	chr8	+	4551	36	FSM	ENSG00000120899.18	ENST00000397501.5	4719	36	165	3	18	1	multi-exon	FALSE	canonical	1	1	junction_3	4.615324960368	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGGTTTGTTTTGTTTGT	27311495	True	NA	15	True	ATTAAA	-16	NA	27311646	27459387	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27311710_27312303_27312388_27313204_27313288_27322401_27322500_27323266_27323427_27325563_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
WTC11_00085719	chr8	+	2864	5	NIC	ENSG00000168077.14	novel	3787	6	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	41.6112965431264	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	27633762	False	NA	17	True	AGTAAA	-16	NA	27633780	27673018	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27670899
WTC11_00085720	chr8	+	902	1	FSM	ENSG00000272256.1	ENST00000606596.1	710	1	698	-890	698	890	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCCACCTCTACTAAAAA	30083443	False	NA	NA	False	NA	NA	NA	30083455	30084357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30083500_30084400
WTC11_00085721	chr8	+	253	3	FSM	ENSG00000104660.19	ENST00000519466.1	575	3	0	322	0	-322	multi-exon	FALSE	canonical	1	3	junction_2	364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGCGTGATCTCACCT	30101924	True	NA	NA	False	NA	NA	NA	30101939	30104765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30101974_30104299_30104487_30104733
WTC11_00085722	chr8	+	1321	1	FSM	ENSG00000272375.1	ENST00000606555.1	645	1	-743	67	-743	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	823	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCAGAGTTGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	30196660	30197981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30196700_30198000
WTC11_00085727	chr8	+	1283	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	-4	35	-4	0	multi-exon	FALSE	canonical	3	50	junction_2	99	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	32922377	True	NA	-12	True	NA	NA	NA	32927963	33045410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_33041634_33041744_33044366
WTC11_00085728	chr8	+	8944	15	FSM	ENSG00000156687.11	ENST00000420357.5	2966	15	-286	-5692	4	0	multi-exon	FALSE	canonical	1	6	junction_1	5.80156558743466	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATACTACATGAGT	35233240	True	NA	10	True	AATAAA	-17	NA	35235478	35796540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35686544_35686710_35722209_35722396_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
WTC11_00085729	chr8	+	9145	17	FSM	ENSG00000156687.11	ENST00000404895.7	9149	17	4	0	4	0	multi-exon	FALSE	canonical	1	2	junction_6	7.09065185649387	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATACTACATGAGT	35233240	True	NA	10	True	AATAAA	-17	NA	35235478	35796540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35684581_35684750_35686544_35686710_35705928_35705962_35722209_35722396_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
WTC11_00085730	chr8	+	2057	1	FSM	ENSG00000279099.1	ENST00000623193.1	2262	1	-37	242	-37	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCAGGTTTTTACATA	NA	False	NA	NA	False	AATATA	-27	NA	35254306	35256363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35254300_35256400
WTC11_00085731	chr8	+	5032	12	NIC	ENSG00000147475.17	novel	1602	12	NA	NA	7	-619	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	12.5151148286204	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGTGAACGTGGCATA	37731540	True	NA	26	True	AATAAA	-32	NA	37736698	37757803	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_37737008_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
WTC11_00085732	chr8	+	6422	16	FSM	ENSG00000020181.18	ENST00000315215.11	6270	16	-57	-95	-34	95	multi-exon	FALSE	canonical	1	1	junction_11	4.7814456205443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTACAAAATCGGGCAAG	37796560	True	NA	NA	False	NA	NA	NA	37796848	37844991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37797535_37814895_37814968_37828887_37828960_37829260_37829333_37829487_37829560_37829850_37830015_37830709_37830924_37831422_37831588_37833009_37833209_37833687_37833838_37833966_37834129_37838955_37839084_37839498_37839623_37840120_37840267_37840759_37840850_37841085
WTC11_00085736	chr8	+	279	3	NIC	ENSG00000131203.13	novel	612	5	NA	NA	0	-2213	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	128.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTTTGTATCATGGGT	39901511	True	NA	NA	False	AATAAA	-21	NA	39902370	39915716	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_39902449_39913888_39914010_39915636
WTC11_00085737	chr8	+	336	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	0	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_3	94.9818696149721	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	39901511	True	NA	NA	False	AATAAA	-26	NA	39902370	39915721	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
WTC11_00085741	chr8	+	443	3	NNC	ENSG00000147536.12	novel	375	3	NA	NA	1	-5145	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	67.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGTCTATGTCCTGGAG	41523275	True	NA	4	True	AATAAA	-18	NA	41529249	41531307	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_41529397_41530183_41530299_41531126
WTC11_00085744	chr8	+	3952	22	FSM	ENSG00000104365.16	ENST00000342222.6	3952	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	29.409455958471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTAAATGACAGTGGG	42269936	True	NA	6	True	AATAAA	-16	NA	42271333	42332450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293569_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
WTC11_00085747	chr8	+	1379	15	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	43.9396617823922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336914	True	NA	16	True	AATAAA	-17	NA	42338509	42371808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
WTC11_00085752	chr8	+	5405	23	NIC	ENSG00000168172.9	novel	14348	22	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_22	17.1798940721583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	42894424	False	NA	96	True	AATAAA	-15	NA	42896986	43030535	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357_43018495_43027428
WTC11_00085753	chr8	+	1608	10	NNC	ENSG00000168522.13	novel	1667	9	NA	NA	0	3185	intron_retention	FALSE	non_canonical	0	0	junction_9	178.880124008879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCATCAGATAATCTTA	43053664	True	NA	NA	False	AAAAAG	-25	NA	43056414	43088973	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159_43085785_43088939
WTC11_00085754	chr8	+	704	1	FSM	ENSG00000188873.4	ENST00000479243.1	654	1	-7	-43	-7	43	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACAGTTATGCAGCCA	NA	False	NA	NA	False	AATAAA	-27	NA	47157110	47157814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47157100_47157800
WTC11_00085759	chr8	+	1203	4	NNC	ENSG00000169139.12	novel	4342	4	NA	NA	0	44549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1931.19899429229	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATGAACTATGTCCAA	48042981	True	NA	NA	False	NA	NA	NA	48043032	48109257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_48043182_48049852_48049979_48060681_48061566_48109213
WTC11_00085761	chr8	+	4054	2	FSM	ENSG00000228801.7	ENST00000656129.1	4014	2	-19	-21	-19	17	multi-exon	FALSE	canonical	1	1	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAGCTTATTATT	51899037	True	NA	16	True	ATTAAA	-21	NA	51899248	51949891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_51899847_51946435
WTC11_00085771	chr8	+	694	5	NIC	ENSG00000215114.10	novel	1225	9	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	108.941498062033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGAAAGTGGAGTTAT	58407252	True	NA	NA	False	AATAAA	-24	NA	58411386	58435103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_58411470_58416849_58416954_58430518_58430670_58434394_58434505_58434857
WTC11_00085772	chr8	+	1259	10	NIC	ENSG00000215114.10	novel	1225	9	NA	NA	13	-26	combination_of_known_junctions	TRUE	canonical	3	28	junction_7	87.2503139475762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATTTTGGTTTTATTG	58407259	True	NA	2	True	ATTAAA	-31	NA	58411393	58447658	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
WTC11_00085773	chr8	+	1640	2	FSM	ENSG00000167912.7	ENST00000518993.2	1090	2	8	-558	-4	64	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTCATTTGTACATTAA	59119032	True	NA	NA	False	AATAAA	-20	NA	59119217	59121907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_59119286_59120335
WTC11_00085774	chr8	+	1155	2	FSM	ENSG00000167912.7	ENST00000662685.2	1227	2	18	54	2	-21	multi-exon	FALSE	canonical	2	5	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTATTATATCAAAACT	59119769	True	NA	-46	True	ATTAAA	-34	NA	59119875	59121294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_59120072_59120335
WTC11_00085776	chr8	+	871	1	FSM	ENSG00000213881.3	ENST00000521088.1	871	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAGAAAATAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	61202349	61203220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_61202300_61203200
WTC11_00085777	chr8	+	382	3	FSM	ENSG00000185942.13	ENST00000676150.1	2627	3	0	2245	0	-2221	multi-exon	FALSE	canonical	1	3	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCCACACATGATTACAT	NA	False	NA	NA	False	NA	NA	NA	62579538	62634350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_62579677_62589713_62589795_62634187
WTC11_00085778	chr8	+	5207	6	FSM	ENSG00000185728.17	ENST00000623280.3	5193	6	-14	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_2	227.056292579616	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGTTCTTTCCATT	63152503	True	NA	11	True	AATAAA	-13	NA	63168538	63212785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63168902_63169386_63169412_63173650_63173682_63175330_63175417_63186146_63187746_63209682
WTC11_00085787	chr8	+	4108	17	FSM	ENSG00000104205.16	ENST00000521198.7	4106	17	-4	2	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.4766870465259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	66712661	True	NA	4	True	AATAAA	-16	NA	66712776	66862020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66712834_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
WTC11_00085789	chr8	+	3827	25	FSM	ENSG00000104218.16	ENST00000678318.1	3822	25	-5	0	1	0	multi-exon	FALSE	canonical	1	5	junction_7	15.8710078094899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTTTATGCCAATGAA	67062086	True	NA	NA	False	NA	NA	NA	67064362	67196168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00085790	chr8	+	3639	23	FSM	ENSG00000104218.16	ENST00000676573.1	3634	23	-5	0	1	0	multi-exon	FALSE	canonical	1	4	junction_10	16.3186882676537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAACTACTTCTTGATA	67062086	True	NA	NA	False	AATGAA	-27	NA	67064362	67196214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00085791	chr8	+	4331	29	FSM	ENSG00000104218.16	ENST00000675869.1	4348	29	17	0	1	0	multi-exon	FALSE	canonical	2	4	junction_16	16.4347814350032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTAAAATCTTTTTAA	67062086	True	NA	NA	False	AATAAA	-11	NA	67064362	67196252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
WTC11_00085795	chr8	+	5694	23	FSM	ENSG00000137573.14	ENST00000260128.8	5710	23	16	0	16	0	multi-exon	FALSE	canonical	2	12	junction_2	22.8424354985219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTCAGAGAAATGA	69464989	True	NA	NA	False	AATAAA	-16	NA	69466639	69660912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_69466951_69495764_69495927_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
WTC11_00085796	chr8	+	5533	22	FSM	ENSG00000137573.14	ENST00000458141.6	5551	22	16	2	16	1	multi-exon	FALSE	canonical	2	37	junction_11	16.6977940618098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTCAGAGAAATGAA	69464989	True	NA	NA	False	AATAAA	-17	NA	69466639	69660913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
WTC11_00085797	chr8	+	2659	11	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	150	56252	-43	7071	5prime_fragment	FALSE	canonical	2	67	junction_10	9.73087868591526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAGCTTTAACATCTAT	69465123	True	NA	NA	False	CATAAA	-28	NA	69466773	69604663	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599
WTC11_00085801	chr8	+	3171	4	FSM	ENSG00000104381.14	ENST00000521096.6	3390	4	219	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9287423797464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTAAGATCAATAAAAGT	74320802	True	NA	NA	False	NA	NA	NA	74320840	74366824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74320962_74361883_74361979_74362938_74363054_74363984
WTC11_00085802	chr8	+	3329	5	FSM	ENSG00000104381.14	ENST00000676377.1	3338	5	9	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	68.6731388535576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATATGAACCCTAAA	74320802	True	NA	NA	False	AATAAA	-11	NA	74320840	74366851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74320919_74360136_74360311_74361883_74361979_74362938_74363054_74363984
WTC11_00085803	chr8	+	3378	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	228	0	9	0	multi-exon	FALSE	canonical	2	3	junction_1	67.4291294619766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	74320802	True	NA	NA	False	AATAAA	-17	NA	74320840	74366857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
WTC11_00085804	chr8	+	3418	5	FSM	ENSG00000104381.14	ENST00000675220.1	3407	5	-11	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_1	68.2582412606712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTGGAAAATAAATAT	74320972	True	NA	NA	False	AATAAA	-1	NA	74321068	74366841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74321246_74360136_74360311_74361883_74361979_74362938_74363054_74363984
WTC11_00085805	chr8	+	3495	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	5	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	52.1359760626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	74346821	True	NA	NA	False	AATAAA	-28	NA	74350399	74366868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
WTC11_00085807	chr8	+	1334	5	FSM	ENSG00000137558.9	ENST00000523773.1	1413	5	79	0	79	0	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTTGAAACATCAATT	NA	False	NA	NA	False	TATAAA	-36	NA	74824864	74849425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74825523_74843980_74844100_74845127_74845261_74845381_74845498_74849117
WTC11_00085823	chr8	+	566	2	FSM	ENSG00000253553.8	ENST00000520849.5	594	2	0	28	0	-28	multi-exon	FALSE	canonical	3	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACAGATGAAGTAAATGA	88327334	True	NA	NA	False	NA	NA	NA	88327843	88329439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_88327899_88328928
WTC11_00085831	chr8	+	5796	26	FSM	ENSG00000164953.17	ENST00000683249.1	5779	26	-17	0	-8	0	multi-exon	FALSE	canonical	1	2	junction_6	17.0786416321674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACTAAAACATTTGGT	93754043	True	NA	-7	True	TATAAA	-28	NA	93754876	93817646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93765647_93772588_93772652_93780592_93780748_93780857_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
WTC11_00085832	chr8	+	4087	27	FSM	ENSG00000164953.17	ENST00000683953.1	4084	27	-3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.9022599238251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATATATACTAAA	93754078	True	NA	-16	True	TATAAA	-19	NA	93754911	93817637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
WTC11_00085833	chr8	+	3457	29	NIC	ENSG00000164953.17	novel	3285	28	NA	NA	3	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	23.4661066916799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTCAGTTTGATATTT	93754094	True	NA	-58	True	NA	NA	NA	93754927	93816845	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_93755138_93755777_93755867_93758482_93758577_93759859_93759994_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786267_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
WTC11_00085834	chr8	+	4422	2	FSM	ENSG00000164951.16	ENST00000518573.1	596	2	-207	-3619	-12	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGTCCTGTGTTGGT	NA	False	NA	5	True	ATTAAA	-16	NA	93916843	93926062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93917219_93922015
WTC11_00085835	chr8	+	3468	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	-5	2	0	-2	multi-exon	FALSE	canonical	3	50	junction_12	179.613523297883	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGCGATTTTTTTTT	94635852	True	NA	18	True	AATAAA	-19	NA	94641198	94707464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
WTC11_00085836	chr8	+	3628	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	85	junction_14	140.743361753054	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTTGCGATTTTTTTT	94635854	True	NA	17	True	AATAAA	-18	NA	94641200	94707463	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94705924
WTC11_00085839	chr8	+	1204	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATATGCTGTCTCTTTA	94717724	True	NA	25	True	AATACA	-15	NA	94719902	94744981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
WTC11_00085844	chr8	+	1893	10	NIC	ENSG00000156170.13	novel	1196	10	NA	NA	3	-10	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	79.9904315265424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACTTTATACTGTACAT	95023384	True	NA	1	True	ATTAAA	-7	NA	95025008	95058700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_95025206_95031994_95032099_95035453_95035577_95036370_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
WTC11_00085858	chr8	+	4498	16	FSM	ENSG00000164830.19	ENST00000531443.6	4498	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.8571895089902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCCTGTAATGGATT	106269987	False	NA	NA	False	NA	NA	NA	106270222	106752615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106270368_106359475_106359637_106518942_106519140_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
WTC11_00085859	chr8	+	582	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270222	False	NA	15	True	AATAAA	-17	NA	106270234	106272774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_106270368_106272325
WTC11_00085860	chr8	+	2681	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	-60	0	-60	0	multi-exon	FALSE	canonical	3	15	junction_1	39.8878427594173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106725951	106752679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
WTC11_00085865	chr8	+	775	3	NIC	ENSG00000254339.6	novel	730	3	NA	NA	0	-43	combination_of_known_splicesites	FALSE	canonical	3	175	junction_2	952	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAATTTACTTAAGCATG	114265206	True	NA	118	True	NA	NA	NA	114282066	114287953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_114282295_114284218_114284534_114287721
WTC11_00085868	chr8	+	3881	2	NNC	ENSG00000254339.6	novel	926	3	NA	NA	17291	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	114299410	False	NA	NA	False	AATAAA	-14	NA	114299426	114304805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_114302916_114304413
WTC11_00085876	chr8	+	3345	21	NNC	ENSG00000156787.17	novel	3167	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.9495473886597	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGTGTTAAGCTTTCA	123070324	True	NA	11	True	AATAAA	-19	NA	123072717	123152150	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_123072847_123077110_123077258_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150038_123150129_123151805
WTC11_00085877	chr8	+	3463	22	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	42.3315388767461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123070324	True	NA	14	True	AATAAA	-22	NA	123072717	123152153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129069_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
WTC11_00085879	chr8	+	1280	7	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	9	14	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	58.1905395136434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAACTTATCCATTTTT	123070381	True	NA	NA	False	AATAAA	-27	NA	123072774	123101101	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_123073006_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806
WTC11_00085882	chr8	+	2201	15	FSM	ENSG00000156787.17	ENST00000518805.5	2201	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	27.2356496571111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123100938	True	NA	14	True	AATAAA	-22	NA	123100952	123152153	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123129069_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
WTC11_00085895	chr8	+	1163	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	-11	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	43.8826560271823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792565	True	NA	38	True	ATTAAA	-18	NA	127794525	128101256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
WTC11_00085898	chr8	+	607	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	1	8548	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	1531.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTCTGAAATATTTTAT	131302357	True	NA	26	True	AATAAA	-21	NA	131310472	131326435	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312555_131312749_131326261
WTC11_00085900	chr8	+	3253	8	FSM	ENSG00000129292.21	ENST00000337920.8	2311	8	-70	-872	-20	0	multi-exon	FALSE	canonical	3	124	junction_6	19.3601737216021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGCTCTAATTACT	132769527	True	NA	1	True	AATAAA	-14	NA	132775337	132813188	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045
WTC11_00085904	chr8	+	2947	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	12	-2148	12	759	multi-exon	FALSE	canonical	3	6	junction_1	120	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAAATTTTTGTATTTT	140511844	True	NA	NA	False	NA	NA	NA	140511993	140517913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_140512026_140514368_140514496_140515125
WTC11_00085906	chr8	+	3029	6	NNC	ENSG00000184489.13	novel	963	3	NA	NA	388	0	intron_retention	FALSE	canonical	3	10	junction_1	85.6448480645509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	NA	False	NA	18	True	AATAAA	-13	NA	141413805	141431520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_141414984_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
WTC11_00085907	chr8	+	1899	5	FSM	ENSG00000184489.13	ENST00000681443.1	1899	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	111.43383687193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141417820	False	NA	18	True	AATAAA	-13	NA	141417908	141431520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_141418032_141421387_141422346_141425047_141425141_141426938_141427070_141430926
WTC11_00085912	chr8	+	284	3	NIC	ENSG00000250571.7	novel	1297	3	NA	NA	45	-179	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCGCAGGGCCCGGTG	143268488	False	NA	NA	False	NA	NA	NA	143269414	143275991	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143269521_143274719_143274803_143275896
WTC11_00085915	chr8	+	2237	15	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_10	29.823716764224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366480	True	NA	-7	True	NA	NA	NA	143368888	143382779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
WTC11_00085916	chr8	+	2560	14	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	13	0	intron_retention	FALSE	canonical	3	26	junction_9	28.7117896325765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366480	True	NA	-7	True	NA	NA	NA	143368888	143382779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379986_143380061_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
WTC11_00085931	chr8	+	5198	43	NIC	ENSG00000179832.18	novel	5349	44	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	14.4697079783799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGACTGACAGGGTGCG	144145342	True	NA	3	True	AATAAA	-16	NA	144148047	144261927	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
WTC11_00085941	chr8	+	4660	6	NNC	ENSG00000160959.8	novel	2243	5	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	15	junction_1	89.4583702064821	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTGACAAAAACATTTTC	144516612	True	NA	28	True	AATAAA	-16	NA	144517985	144525165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_144518042_144519833_144520055_144520237_144520823_144520910_144523334_144523635_144524106_144524260
WTC11_00085944	chr8	+	3096	2	FSM	ENSG00000255085.8	ENST00000529026.1	661	2	-5	-2430	-5	1070	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGGTAAGAGCAATTGA	144705488	False	NA	NA	False	AATAAA	-15	NA	144705624	144709587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144706043_144706909
WTC11_00085946	chr8	+	3556	2	FSM	ENSG00000147789.16	ENST00000528017.1	5641	2	2085	0	2085	0	multi-exon	FALSE	canonical	3	96	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	144833140	False	NA	20	True	AATAAA	-17	NA	144835817	144843220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144837508_144841354
WTC11_00085948	chr8	-	529	1	FSM	ENSG00000255464.1	ENST00000508026.3	178	1	2	-353	2	353	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCCTGGAGGTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	200560	200031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_2e+05_200600
WTC11_00085949	chr8	-	736	3	FSM	ENSG00000223508.5	ENST00000606975.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATAAGAGTGACA	-231976	True	NA	NA	False	CATAAA	-8	NA	232211	213185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_213711_219289_219418_232128
WTC11_00085950	chr8	-	375	2	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATGACCGCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	306260	305252	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_305532_306164
WTC11_00085951	chr8	-	630	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCATTTTTGAGATA	-451331	False	NA	0	True	AATAAA	-28	NA	451343	450713	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_450700_451300
WTC11_00085953	chr8	-	3969	3	NNC	ENSG00000104714.14	novel	406	3	NA	NA	-4182	-2868	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGACTTTGGCAATTT	NA	False	NA	NA	False	AGTAAA	-36	NA	645389	640403	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_640835_641113_644376_645113
WTC11_00085954	chr8	-	585	2	FSM	ENSG00000104714.14	ENST00000518895.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTAGAGCCGGGGCCG	-673436	False	NA	NA	False	NA	NA	NA	673462	671793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_672205_673288
WTC11_00085955	chr8	-	1766	3	FSM	ENSG00000253764.4	ENST00000662506.1	1766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTGTTGGCTTTGA	NA	False	NA	66	True	TATAAA	-36	NA	1973610	1971178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1972358_1972539_1972664_1973147
WTC11_00085956	chr8	-	1317	1	FSM	ENSG00000271743.1	ENST00000607368.1	1595	1	166	112	166	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTTACGCTAATCTA	NA	False	NA	NA	False	NA	NA	NA	6617032	6615715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6615700_6617000
WTC11_00085959	chr8	-	1121	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	0	-20645	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTTCAACTCTGTAT	-6707670	True	NA	-12	True	ATTAAA	-18	NA	6708216	6687937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_6688983_6708140
WTC11_00085960	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.02305952453618	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-6834889	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
WTC11_00085961	chr8	-	284	1	FSM	ENSG00000284614.1	ENST00000641497.1	218	1	-4	-62	-4	62	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGGCCGGCCCCGGGTT	-7221768	False	NA	NA	False	NA	NA	NA	7221934	7221650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7221600_7221900
WTC11_00085962	chr8	-	5813	3	NNC	ENSG00000173281.5	novel	2334	2	NA	NA	-42	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTCTATTCTTAGAG	-9149735	True	NA	NA	False	AATAAA	-23	NA	9151616	9136248	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9141676_9150561_9150678_9151346
WTC11_00085963	chr8	-	2334	2	FSM	ENSG00000173281.5	ENST00000519699.1	2334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAGAGAATTTT	-9149693	True	NA	NA	False	NA	NA	NA	9151574	9139562	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9141669_9151346
WTC11_00085964	chr8	-	3693	2	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-931	10653	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTCTTTT	-9180781	True	NA	NA	False	AATACA	-19	NA	9183450	9169597	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9172304_9182463
WTC11_00085966	chr8	-	2015	1	FSM	ENSG00000269918.1	ENST00000602575.1	2014	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGGTTATAACTGGTA	-11106692	False	NA	NA	False	AATAAA	-14	NA	11106704	11104689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11104700_11106700
WTC11_00085968	chr8	-	1569	1	FSM	ENSG00000280273.2	ENST00000622929.1	1569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTGAGATACGTAAAT	-11285000	True	NA	-16	True	AATAAA	-18	NA	11285068	11283499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11283500_11285100
WTC11_00085969	chr8	-	3155	11	FSM	ENSG00000164733.22	ENST00000678929.1	3155	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	184.690010558232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCCAAGGTGG	-11862841	True	NA	NA	False	NA	NA	NA	11868114	11843211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11857857_11857941_11868000
WTC11_00085971	chr8	-	204	1	FSM	ENSG00000254866.2	ENST00000529497.2	240	1	-53	89	-53	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTGTTGTAGAGCATG	NA	False	NA	NA	False	NA	NA	NA	12151187	12150983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12151000_12151200
WTC11_00085972	chr8	-	2096	7	FSM	ENSG00000186523.15	ENST00000448228.7	2403	7	-38	345	7	105	multi-exon	FALSE	canonical	1	3	junction_2	18.6227161164948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAACCCCCCTCACT	-12194107	True	NA	NA	False	NA	NA	NA	12194120	12182450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12189807_12189889_12191778_12191842_12193974
WTC11_00085974	chr8	-	2097	2	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	9	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTCAGTTAGTTGTT	NA	False	NA	NA	False	ATTAAA	-36	NA	12612280	12551108	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_12551358_12610432
WTC11_00085975	chr8	-	1700	7	NNC	ENSG00000283674.3	novel	3959	9	NA	NA	19	-6173	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	10.5422430672456	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCCGG	-12664835	False	NA	NA	False	NA	NA	NA	12665495	12601157	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12601399_12601786_12601855_12606988_12607153_12607290_12607532_12607922_12607991_12659129_12659830_12665277
WTC11_00085977	chr8	-	3294	5	ISM	ENSG00000164741.15	ENST00000510318.5	2028	9	4603	-2189	-2695	-5	3prime_fragment	FALSE	canonical	3	9	junction_4	2.6809513236909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTGATTGGATTAGCT	NA	False	NA	-3	True	AATAAA	-17	NA	13091434	13083365	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317
WTC11_00085978	chr8	-	1333	3	FSM	ENSG00000078579.9	ENST00000180166.6	1840	3	489	18	-16	-18	multi-exon	FALSE	canonical	2	3	junction_2	3	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAACATTTTCATGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	17001856	16992198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_16993318_16995654_16995759_17001746
WTC11_00085979	chr8	-	360	2	FSM	ENSG00000198791.12	ENST00000522062.1	444	2	84	0	84	0	multi-exon	FALSE	canonical	3	1259	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACTTCTTTGAGATCC	-17228996	False	NA	NA	False	NA	NA	NA	17237511	17234800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17234861_17237211
WTC11_00085980	chr8	-	6121	14	NIC	ENSG00000129422.15	novel	6125	15	NA	NA	-147	4	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	6.03245659283005	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCTACTTCATTCTTC	-17801090	False	151	4	True	AATAAA	-30	NA	17801241	17643790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17743603_17743800_17753716_17755962_17801060
WTC11_00085982	chr8	-	2148	13	FSM	ENSG00000104763.20	ENST00000636009.1	2148	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_12	327.258647284105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGGTGTGTACATC	-18083802	False	NA	-15	True	AATAAA	-38	NA	18083950	18056430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
WTC11_00085983	chr8	-	2245	13	FSM	ENSG00000104763.20	ENST00000520781.6	2245	13	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_8	321.486607635355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-18076457	True	NA	-36	True	AATAAA	-17	NA	18084108	18056451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00085984	chr8	-	3091	12	FSM	ENSG00000104763.20	ENST00000638069.1	3068	12	0	-23	0	0	multi-exon	FALSE	canonical	3	340	junction_4	294.227578191772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-18076463	True	NA	-36	True	AATAAA	-17	NA	18084114	18056451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00085988	chr8	-	827	6	NNC	ENSG00000104763.20	novel	4611	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	393.487687227949	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGGGTGTCTGGGTA	-18076426	True	NA	-4	True	AATAAA	-23	NA	18084077	18066763	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_18067104_18067133_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
WTC11_00085990	chr8	-	281	1	FSM	ENSG00000253384.1	ENST00000517431.1	1119	1	166	672	166	-672	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCAGATTCCAGCAGA	NA	False	NA	NA	False	ATTAAA	-23	NA	18089521	18089240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18089200_18089500
WTC11_00085992	chr8	-	1370	1	Genic_Genomic	ENSG00000156011.18	novel	NA	NA	NA	NA	-883	-77921	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGAGGGTCTGGATCGC	NA	False	NA	NA	False	NA	NA	NA	19015343	19013973	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_19014000_19015300
WTC11_00085994	chr8	-	478	4	FSM	ENSG00000168453.16	ENST00000518461.2	560	4	82	0	82	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCCCCTCTCTCCAG	-22122597	False	NA	NA	False	GGGGCT	-31	NA	22122608	22120842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22120959_22121064_22121229_22121612_22121695_22122492
WTC11_00085996	chr8	-	3241	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	-143	1	-143	-1	multi-exon	TRUE	canonical	2	5	junction_4	6.24819974072532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGCTGCTGTAACAA	-22232189	False	NA	-1	True	AATAAA	-35	NA	22232244	22219704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
WTC11_00085999	chr8	-	3993	1	Genic_Genomic	ENSG00000134013.16	novel	NA	NA	NA	NA	-1524	-18954	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCTCAAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	23426852	23422859	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_23422900_23426900
WTC11_00086002	chr8	-	3903	5	NNC	ENSG00000159167.12	novel	3868	4	NA	NA	0	61377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.9418500999415	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACACTATCAGTTCTG	-23854412	True	NA	NA	False	NA	NA	NA	23854806	23780551	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_23780579_23841920_23845041_23851319_23851532_23852241_23852385_23854405
WTC11_00086005	chr8	-	3342	12	NIC	ENSG00000104756.16	novel	3367	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	19.1884951756889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-25457621	False	NA	-4	True	ATTAAA	-20	NA	25458280	25427846	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439793_25440576_25440674_25444291_25444336_25446128_25446251_25458198
WTC11_00086007	chr8	-	1999	8	FSM	ENSG00000120885.22	ENST00000523500.5	2381	8	382	0	230	0	multi-exon	FALSE	canonical	3	1088	junction_4	104.224248030634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	-27610352	False	NA	-29	True	AATAAA	-18	NA	27610975	27597995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474
WTC11_00086009	chr8	-	4802	10	FSM	ENSG00000186918.14	ENST00000344423.10	4797	10	0	-5	0	5	multi-exon	FALSE	canonical	3	5	junction_9	23.6220236220354	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCCTTTGCCC	NA	False	NA	0	True	AATAAA	-22	NA	28386460	28345584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386392
WTC11_00086010	chr8	-	5040	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	119	5	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	19.7190138235369	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCCTTTGCCC	-28386258	False	NA	0	True	AATAAA	-22	NA	28386309	28345584	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386003
WTC11_00086013	chr8	-	817	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	-417	3	-417	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCCGCGTCATTATGC	-30156446	True	NA	-5	True	AATAAA	-16	NA	30156649	30155832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30155800_30156600
WTC11_00086016	chr8	-	1982	3	NIC	ENSG00000172733.12	novel	2693	2	NA	NA	66	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGATTCTTAATTATTT	-31033268	False	NA	1	True	AATAAA	-21	NA	31033290	30995798	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_30996698_31031918_31032789_31033077
WTC11_00086017	chr8	-	2716	1	FSM	ENSG00000172733.12	ENST00000475541.2	2866	1	150	0	150	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATACTTTATGCTTC	-31033535	True	NA	NA	False	AATATA	-13	NA	31033565	31030849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_31030800_31033600
WTC11_00086020	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.92341345003647	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-33564286	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
WTC11_00086021	chr8	-	1604	4	NNC	ENSG00000133878.9	novel	1754	4	NA	NA	90	-12	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	6.84754619472471	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAAAAGAAGAGAGTTT	-33599659	False	NA	-13	True	AATAAA	-4	NA	33599888	33591341	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_33592213_33593532_33593748_33597294_33597589_33599664
WTC11_00086023	chr8	-	359	1	FSM	ENSG00000253684.1	ENST00000521828.1	359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGGGCACCCTTGACAT	NA	False	NA	NA	False	NA	NA	NA	33641939	33641580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33641600_33641900
WTC11_00086025	chr8	-	875	7	FSM	ENSG00000147535.17	ENST00000531823.5	875	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	252.793503784325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCTGAGGAGG	-38263473	True	NA	NA	False	NA	NA	NA	38269174	38264397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268822_38268991_38269125
WTC11_00086031	chr8	-	1619	11	NNC	ENSG00000077782.22	novel	3824	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	263.000399239241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCGACAAGGCCGC	-38428421	False	NA	NA	False	TATAAA	-13	NA	38428435	38414778	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345
WTC11_00086032	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	284.51869690565	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986718	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
WTC11_00086036	chr8	-	4327	12	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	-427	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	48.40804522985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTGAAGCCTTTTT	-42501628	False	NA	-10	True	AATAAA	-17	NA	42501670	42416473	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42471066_42471202_42472101_42472655_42501030
WTC11_00086037	chr8	-	2962	2	FSM	ENSG00000168575.10	ENST00000523340.1	1265	2	-870	-827	-447	827	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATTAGCCGGGCATG	NA	False	NA	NA	False	NA	NA	NA	42542373	42533832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42535336_42540914
WTC11_00086045	chr8	-	1199	3	NNC	ENSG00000168300.14	novel	1712	3	NA	NA	0	-580	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	61.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTATGTTCTCTTTAA	-51895499	True	NA	-1	True	AATAAA	-17	NA	51899036	51849524	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_51850215_51860844_51861247_51898929
WTC11_00086048	chr8	-	1818	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	86.0039970001395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53839400	False	3561	-1	True	AATAAA	-30	NA	53842961	53715669	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
WTC11_00086054	chr8	-	2912	4	NNC	ENSG00000167904.16	novel	2588	3	NA	NA	-444	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	75.2167239086864	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTGAGAAATTACATG	NA	False	NA	2	True	AATAAA	-17	NA	55746491	55738741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_55740219_55743480_55743621_55745060_55746036_55746171
WTC11_00086058	chr8	-	899	3	FSM	ENSG00000008988.11	ENST00000523936.5	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	4508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATGACCAGTTGTTAAC	-55869671	False	NA	-24	True	NA	NA	NA	56074356	56073072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073769_56074059_56074160_56074253
WTC11_00086059	chr8	-	426	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	-2	0	0	multi-exon	FALSE	canonical	1	124	junction_1	4512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATGACCAGTTGTTAAC	-55869821	True	NA	-24	True	NA	NA	NA	56074506	56073072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56074059_56074160_56074380
WTC11_00086061	chr8	-	737	3	FSM	ENSG00000008988.11	ENST00000521289.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_2	206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGAGGTGGAAGTCA	-55869821	True	NA	-78	True	NA	NA	NA	56074506	56073126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56074160_56074380
WTC11_00086064	chr8	-	1277	10	FSM	ENSG00000198363.18	ENST00000522919.5	1277	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	198.752777758367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACAGTGTGATGCCTT	-61646769	True	NA	1	True	AATAAA	-16	NA	61646807	61606460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61607323_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749
WTC11_00086066	chr8	-	663	1	FSM	ENSG00000272010.1	ENST00000606963.1	623	1	-52	12	-52	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACAAAGATTCGGTGC	NA	False	NA	NA	False	AATACA	-8	NA	65592524	65591861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65591900_65592500
WTC11_00086068	chr8	-	4205	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	-291	10915	intron_retention	FALSE	non_canonical	0	0	junction_1	100.101132293249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACATCAAGCATGGAT	NA	False	NA	NA	False	NA	NA	NA	65842613	65703418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65703452_65717671_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
WTC11_00086069	chr8	-	685	6	FSM	ENSG00000205268.11	ENST00000519231.5	685	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	148.442581491969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAAATTCCCTAAAC	-65838379	True	NA	NA	False	NA	NA	NA	65842088	65747704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65747804_65779719_65779804_65780843_65780948_65782782_65782844_65841370_65841468_65841848
WTC11_00086072	chr8	-	3711	8	FSM	ENSG00000121022.14	ENST00000521509.5	3826	8	112	3	-71	0	multi-exon	FALSE	canonical	3	48	junction_7	234.741194875183	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTCCTTTGATTTTTT	-67062177	False	NA	NA	False	AATAAA	-14	NA	67062224	67043081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67062025_67062105
WTC11_00086075	chr8	-	8223	22	NNC	ENSG00000140396.13	novel	8430	23	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_21	16.1233904257405	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	-70402008	False	NA	-20	True	AATAAA	-22	NA	70402067	70109781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70401958
WTC11_00086076	chr8	-	8629	23	NNC	ENSG00000140396.13	novel	8430	23	NA	NA	303	0	intron_retention	FALSE	canonical	2	12	junction_22	11.9000659766211	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	-70403446	False	NA	-20	True	AATAAA	-22	NA	70403505	70109781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403197
WTC11_00086078	chr8	-	3269	11	FSM	ENSG00000067167.8	ENST00000521425.5	3394	11	125	0	125	0	multi-exon	FALSE	canonical	1	9	junction_10	229.347792664329	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATCCTGGATGTTTCT	-70607592	False	56	-12	True	AATAAA	-18	NA	70607653	70573441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70606876
WTC11_00086083	chr8	-	2732	14	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	0	534	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	136.843062186722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	-73742391	True	NA	-3	True	AATAAA	-17	NA	73746818	73526834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
WTC11_00086085	chr8	-	892	7	NIC	ENSG00000040341.18	novel	1041	7	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	187.070173998957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTTGAACCGCACTG	-73747324	False	NA	-10	True	ATTAAA	-16	NA	73747353	73653662	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73747301
WTC11_00086087	chr8	-	3557	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	37.7221420388609	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	-74319567	False	NA	NA	False	AATAAA	-22	NA	74320933	74234699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_74236610_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
WTC11_00086088	chr8	-	865	4	FSM	ENSG00000253706.5	ENST00000523860.5	773	4	-92	0	-78	0	multi-exon	FALSE	canonical	2	9	junction_2	21.9241115365405	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTCAATTGAGGT	NA	False	NA	NA	False	TTTAAA	-28	NA	74867017	74798783	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_74799320_74818609_74818669_74866517_74866635_74866864
WTC11_00086089	chr8	-	2810	3	FSM	ENSG00000253706.5	ENST00000518128.5	2810	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGGAACTATGTTG	-74866728	True	NA	NA	False	AATAAA	-17	NA	74866939	74816050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_74818669_74866517_74866635_74866864
WTC11_00086092	chr8	-	1705	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	-1	0	1	multi-exon	TRUE	canonical	2	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAGCTAATGGAAGTGT	-75324366	True	NA	-9	True	AATAAA	-21	NA	75324692	75223125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_75224359_75324220
WTC11_00086095	chr8	-	848	3	NNC	ENSG00000147586.10	novel	838	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_2	239.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023698	True	NA	-4	True	AATAAA	-21	NA	80030254	79918716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_79919149_80002998_80003181_80030020
WTC11_00086105	chr8	-	2278	2	FSM	ENSG00000176731.12	ENST00000615071.1	344	2	-1509	-425	1059	0	multi-exon	FALSE	canonical	3	1575	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	-85216627	False	NA	NA	False	AATATA	-25	NA	85216643	85214076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920
WTC11_00086106	chr8	-	939	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	-39	-425	0	0	multi-exon	FALSE	canonical	3	51	junction_3	615.085563153615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	-85201995	True	NA	NA	False	AATATA	-25	NA	85220414	85214076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
WTC11_00086107	chr8	-	506	4	FSM	ENSG00000176731.12	ENST00000545322.5	491	4	0	-15	0	0	multi-exon	FALSE	canonical	3	105	junction_1	331.078037125187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	-85202002	True	NA	0	True	AATAAA	-33	NA	85220421	85214486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85217385_85217503_85219235_85219364_85220305
WTC11_00086111	chr8	-	1176	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	63.5032807551442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGTGACCTGTTATG	-86505021	True	NA	-9	True	AATAAA	-20	NA	86508770	86472347	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_86472480_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
WTC11_00086112	chr8	-	3557	8	FSM	ENSG00000156103.16	ENST00000544227.5	1512	8	-277	-1768	0	1768	multi-exon	FALSE	canonical	2	4	junction_1	10.6866309767229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGTCAGTTATACCA	-88327422	False	NA	NA	False	AATAAA	-18	NA	88327483	88067464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88069523_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
WTC11_00086113	chr8	-	4550	17	NIC	ENSG00000104320.14	novel	4907	19	NA	NA	7	-67	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	61.7311459070703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTACTGTAGCTGCATA	-89981990	True	NA	-78	True	NA	NA	NA	89984658	89933402	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980853_89981374_89981524_89981952_89982003_89982721_89982856_89984524
WTC11_00086114	chr8	-	4629	17	ISM	ENSG00000104320.14	ENST00000396252.6	4907	19	18609	-10	0	5	3prime_fragment	TRUE	canonical	3	59	junction_14	48.1090882786195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAGTCAAAAGTGCAT	-89981951	True	NA	-1	True	AATAAA	-24	NA	89984619	89933325	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524
WTC11_00086117	chr8	-	5280	1	Genic_Genomic	ENSG00000104327.7	novel	NA	NA	NA	NA	-66	-11838	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-90095384	True	NA	NA	False	AATAAA	-22	NA	90095541	90090261	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_90090300_90095500
WTC11_00086118	chr8	-	943	5	NIC	ENSG00000253250.3	novel	1041	6	NA	NA	19	-5	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	117.41486277299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGGGTATTTCTTTTC	-90983480	True	NA	-10	True	AATAAA	-15	NA	90985219	90958475	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_90959031_90960741_90960849_90971065_90971142_90980362_90980462_90985113
WTC11_00086119	chr8	-	7375	11	FSM	ENSG00000079102.16	ENST00000615601.4	7372	11	0	-3	0	3	multi-exon	FALSE	canonical	2	10	junction_10	7.26636084983398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCAGTCTATTCTCAGT	-92103215	False	NA	3	True	AATAAA	-28	NA	92103226	91954963	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92102856
WTC11_00086124	chr8	-	2102	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	5	-4	0	4	multi-exon	FALSE	canonical	2	13	junction_4	4.49305018890286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTGATTTTCCTCC	-94261573	True	NA	NA	False	AATAAA	-27	NA	94262345	94249248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
WTC11_00086126	chr8	-	640	2	FSM	ENSG00000197275.14	ENST00000523192.1	630	2	0	-10	0	10	multi-exon	FALSE	canonical	3	181	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGTCTGGCCTTGAAC	-94399570	False	NA	NA	False	NA	NA	NA	94399583	94393412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94393883_94399413
WTC11_00086127	chr8	-	594	3	FSM	ENSG00000175305.18	ENST00000517487.5	830	3	0	236	0	-236	multi-exon	FALSE	canonical	3	57	junction_1	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCAGAACTGGGCTGG	-94894617	False	NA	NA	False	AAAAAG	-41	NA	94894650	94893890	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94893945_94894022_94894120_94894207
WTC11_00086132	chr8	-	1406	3	ISM	ENSG00000156469.9	ENST00000522822.5	1148	6	10440	-6	10235	6	intron_retention	FALSE	canonical	3	463	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGTCTCAACTGATATT	NA	False	NA	-2	True	AATAAA	-20	NA	96246835	96239417	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_96239686_96243918_96244081_96245859
WTC11_00086134	chr8	-	367	4	ISM	ENSG00000156482.11	ENST00000287038.8	498	5	1	924	0	0	5prime_fragment	FALSE	canonical	3	4116	junction_3	1305.98987574772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCTTTTTAAATCATAA	-97980495	True	NA	NA	False	NA	NA	NA	98045544	98042644	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_98042776_98044942_98045089_98045346_98045400_98045507
WTC11_00086142	chr8	-	2867	2	FSM	ENSG00000186106.11	ENST00000520713.5	1327	2	135	-1675	135	1675	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACGTGATTTGATTTC	-100554539	False	NA	-4	True	ATTAAA	-21	NA	100556719	100548852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100551570_100556569
WTC11_00086143	chr8	-	3145	14	FSM	ENSG00000070756.17	ENST00000677787.1	3145	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	2202.11432021363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	-100721509	False	NA	NA	False	NA	NA	NA	100721645	100702050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
WTC11_00086152	chr8	-	9235	59	NIC	ENSG00000104517.13	novel	10895	59	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	101.507981914675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAATAGGGAATTTCAAA	-102398512	True	NA	-61	True	NA	NA	NA	102412759	102253940	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299497_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
WTC11_00086164	chr8	-	1233	4	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	16	junction_1	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAATAAATGGTTGAATA	-107240788	True	NA	-36	True	AATAAA	-6	NA	107241077	107233546	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_107234437_107237902_107238002_107240602_107240722_107240952
WTC11_00086167	chr8	-	2107	13	FSM	ENSG00000104408.11	ENST00000676892.1	2107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1091.12224019839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209511	True	NA	NA	False	NA	NA	NA	108248775	108201215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203145_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
WTC11_00086168	chr8	-	1399	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	-5	0	0	multi-exon	FALSE	canonical	3	14	junction_11	1126.36626311235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209469	True	NA	-25	True	AATAAA	-18	NA	108248733	108201739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
WTC11_00086172	chr8	-	2077	8	FSM	ENSG00000104408.11	ENST00000677696.1	2077	8	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_6	162.095965529116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAAGATTCTGGCTTCT	-108230330	False	NA	NA	False	NA	NA	NA	108230430	108201909	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069
WTC11_00086182	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	171.930864658508	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-123036742	True	NA	36	True	NA	NA	NA	123042302	123015164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
WTC11_00086186	chr8	-	927	12	NIC	ENSG00000147687.19	novel	1029	12	NA	NA	2	-29	combination_of_known_junctions	FALSE	canonical	3	83	junction_8	100.827731329028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACTGGAATTAGCCAAT	-124534285	True	NA	-81	True	NA	NA	NA	124539068	124488658	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124539024
WTC11_00086193	chr8	-	6286	27	NIC	ENSG00000153317.15	novel	6259	30	NA	NA	-17705	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	18.5479149213326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAATCAGGCCATTT	-130357974	True	NA	-6	True	AATAAA	-23	NA	130358642	130052103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_130054806_130057953_130058077_130060578_130061070_130076347_130076407_130079901_130079972_130112093_130112323_130115627_130115736_130116677_130116746_130116879_130116996_130118160_130118247_130118488_130118676_130124012_130124105_130125955_130126090_130127926_130128091_130134295_130134345_130136950_130137039_130152735_130152806_130159863_130159965_130167535_130167623_130168991_130169068_130179263_130179350_130180750_130180881_130187235_130187286_130188108_130188184_130214555_130214702_130236921_130236995_130358016
WTC11_00086198	chr8	-	1505	6	NNC	ENSG00000132297.13	novel	4188	17	NA	NA	-4862	-11442	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	56.6907399845865	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTCTCCTTTTTCATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	132085966	132075226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_132075531_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
WTC11_00086210	chr8	-	4213	30	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	90	junction_28	95.1985596269897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993189	True	NA	-4	True	ATTAAA	-34	NA	141001233	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
WTC11_00086211	chr8	-	4413	31	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	250	junction_30	63.6715181397634	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993222	True	NA	-4	True	ATTAAA	-34	NA	141001266	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_141001124
WTC11_00086212	chr8	-	4467	32	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_30	117.340615215655	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGGTTCTGTTTC	-140993217	True	NA	-3	True	ATTAAA	-35	NA	141001261	140658384	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140948665_140948724_141001124
WTC11_00086214	chr8	-	936	4	ISM	ENSG00000169398.19	ENST00000395218.3	4415	31	28	220797	0	-17	5prime_fragment	FALSE	canonical	3	187	junction_3	118.502695703047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAATCATATATATAT	-140993241	True	NA	-18	True	NA	NA	NA	141001285	140879178	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
WTC11_00086223	chr8	-	1699	14	NNC	ENSG00000147813.16	novel	1682	13	NA	NA	0	10890	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.6773423865538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGGGCCTGGATAC	-143578298	False	NA	NA	False	AAAAAG	-1	NA	143578321	143563894	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_143563926_143574789_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
WTC11_00086229	chr8	-	3718	4	FSM	ENSG00000104529.19	ENST00000527741.5	3718	4	0	0	0	0	multi-exon	FALSE	canonical	3	3906	junction_3	179.433057774264	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143584228	False	NA	-34	True	ATTAAA	-14	NA	143584251	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053
WTC11_00086252	chr8	-	4906	38	Fusion	ENSG00000147804.10_ENSG00000071894.17	novel	4480	38	NA	NA	-514	2	multi-exon	FALSE	canonical	3	23	junction_18	104.786875429298	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGATGCCGTCACCACC	-144409813	False	714	-89	True	NA	NA	NA	144409849	144393315	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397877_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
WTC11_00086255	chr8	-	11094	3	FSM	ENSG00000187954.13	ENST00000528663.1	5821	3	-5278	5	-48	-5	multi-exon	FALSE	canonical	3	116	junction_1	61.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAATTTTAGTGAGAAAGA	-144462700	False	NA	-3	True	ATTAAA	-27	NA	144462919	144449586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144450771_144452358_144452571_144453221
WTC11_00086260	chr8	-	2005	3	NNC	ENSG00000213563.7	novel	1637	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_2	102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	-144526166	True	NA	-39	True	NA	NA	NA	144529062	144526251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144527788_144528023_144528191_144528760
WTC11_00086261	chr8	-	1863	5	NNC	ENSG00000213563.7	novel	1637	4	NA	NA	0	65	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	65.9142435289976	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGTCCTGTCCCTTT	-144526196	True	NA	59	True	TTTAAA	-45	NA	144529092	144526153	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144526640_144526959_144527788_144528023_144528073_144528267_144528436_144528760
WTC11_00086266	chr8	-	1541	2	FSM	ENSG00000170619.10	ENST00000450361.2	1573	2	41	-9	41	-3	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCTCATCAGAGGATG	NA	False	NA	-17	True	AATAAA	-17	NA	144853695	144850178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144853371
WTC11_00086269	chr8	-	1739	5	NNC	ENSG00000196150.14	novel	672	6	NA	NA	16	3093	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	27.6439414700581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144899284	True	NA	-2	True	ATTAAA	-18	NA	144901407	144886593	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144887910_144889580_144889695_144889932_144890075_144890307_144890404_144901336
WTC11_00086275	chr8	+	3505	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTGTCTGTTTACTC	22256236	False	NA	NA	False	AATAAA	-21	NA	22256247	22259752	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_22256200_22259800
WTC11_00086276	chr8	+	497	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGACACACATGCCCG	28412451	False	NA	NA	False	NA	NA	NA	28412467	28412964	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_28412500_28413000
WTC11_00086277	chr8	+	242	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGATTGTCTCGTCGGCT	NA	False	NA	NA	False	NA	NA	NA	53713356	53713598	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_53713400_53713600
WTC11_00086281	chr8	+	263	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGCAAGTCACAGGG	NA	False	NA	NA	False	NA	NA	NA	67720096	67720359	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_67720100_67720400
WTC11_00086283	chr8	+	350	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGAAAGATGTTAGGAA	NA	False	NA	NA	False	TTTAAA	-38	NA	80644514	80644864	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_80644500_80644900
WTC11_00086284	chr8	+	256	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGTTTCCTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	82291352	82291608	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_82291400_82291600
WTC11_00086286	chr8	+	2355	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTGTAAAGTGTCTTA	NA	False	NA	NA	False	AGTAAA	-29	NA	84335709	84338064	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_84335700_84338100
WTC11_00086305	chr8	+	1083	1	FSM	ENSG00000282692.1	ENST00000634128.1	948	1	-96	-39	-96	39	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCACTTCTGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	1018660	1019743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1018700_1019700
WTC11_00086306	chr8	+	3521	10	FSM	ENSG00000198010.13	ENST00000520901.5	3515	10	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_9	1.89215404065849	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCCTGTGATGGAAAG	NA	False	NA	NA	False	AAAACA	-17	NA	1548637	1701985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1549684_1565682_1565895_1626739_1626888_1632826_1633047_1668328_1668679_1676532_1676619_1678213_1678630_1691534_1691627_1697146_1697300_1701187
WTC11_00086312	chr8	+	3343	3	NNC	ENSG00000173295.9	novel	2829	2	NA	NA	1106	0	intron_retention	FALSE	canonical	2	5	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCGTGTTGTCTGTTG	8238296	False	NA	14	True	ATTAAA	-17	NA	8238313	8244863	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8238556_8239626_8241963_8244098
WTC11_00086313	chr8	+	312	1	Genic_Genomic	ENSG00000104626.15	novel	NA	NA	NA	NA	50131	159	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGATAATAATAATAATAA	NA	False	NA	NA	False	AATAAA	-30	NA	9099948	9100260	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_9099900_9100300
WTC11_00086314	chr8	+	1452	1	FSM	ENSG00000173273.16	ENST00000522110.1	2900	1	-20	1468	0	-1468	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATTTCTTAAGCTCTG	9551610	True	NA	NA	False	AAAAAG	-1	NA	9555911	9557363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9555900_9557400
WTC11_00086315	chr8	+	4469	28	NNC	ENSG00000173273.16	novel	9622	27	NA	NA	18	-3874	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_27	37.4642033078572	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAATAAATTTGTCATA	9551648	True	NA	NA	False	AATAAA	-15	NA	9555949	9773055	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9772368_9772424_9772528
WTC11_00086316	chr8	+	304	1	FSM	ENSG00000272505.1	ENST00000606115.1	2860	1	-252	2808	-252	-2808	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGCACTCGGTGCCCATG	NA	False	NA	NA	False	ATTAAA	-33	NA	10486554	10486858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_10486600_10486900
WTC11_00086317	chr8	+	456	1	FSM	ENSG00000231965.4	ENST00000488887.2	520	1	-228	292	-228	-292	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAACTTTTGCTGCACG	NA	False	NA	NA	False	GGGGCT	-7	NA	11174822	11175278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11174800_11175300
WTC11_00086318	chr8	+	707	1	FSM	ENSG00000270076.1	ENST00000602443.1	707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGGTGCAATTAATT	11202928	False	NA	12	True	AATAAA	-25	NA	11202964	11203671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11203000_11203700
WTC11_00086320	chr8	+	203	1	FSM	ENSG00000255174.1	ENST00000533272.1	382	1	39	140	39	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAGGACATGCTCAGT	NA	False	NA	NA	False	AAAAAG	-18	NA	11999125	11999328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11999100_11999300
WTC11_00086321	chr8	+	438	5	FSM	ENSG00000255052.5	ENST00000653408.1	3002	5	412	2152	0	-2012	multi-exon	TRUE	canonical	0	0	junction_4	5.02493781056044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCTTGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	12116221	12146015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12116326_12121986_12122051_12145422_12145547_12145638_12145701_12145931
WTC11_00086322	chr8	+	232	2	NNC	ENSG00000255495.1	novel	1361	2	NA	NA	-193	-868	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGATAACGATATCTACCA	12193927	True	NA	NA	False	GATAAA	-3	NA	12194273	12195412	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_12194375_12195281
WTC11_00086323	chr8	+	824	3	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGAACCCAAGCAATC	12437284	False	NA	NA	False	NA	NA	NA	12437296	12441061	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12440999
WTC11_00086324	chr8	+	1197	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	23	104	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTGA	12483188	True	NA	24	True	NA	NA	NA	12483276	12566913	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12483357_12530942_12531032_12565885
WTC11_00086325	chr8	+	5332	2	FSM	ENSG00000250305.9	ENST00000529978.1	6003	2	671	0	671	0	multi-exon	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAACAAATTAGGGCA	NA	False	NA	NA	False	NA	NA	NA	13012683	13026165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_13012858_13021007
WTC11_00086326	chr8	+	1490	11	NIC	ENSG00000104723.21	novel	3697	11	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	109.528489444528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTTAACTTACTGAAA	15535974	True	NA	1	True	AATAAA	-16	NA	15540274	15758274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758033
WTC11_00086327	chr8	+	6836	39	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	-216	-7	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	88.0986800345085	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	17921809	True	NA	NA	False	AATAAA	-16	NA	17922751	18027968	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00086328	chr8	+	6669	40	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	84.5176825213347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17921955	False	NA	15	True	AATAAA	-26	NA	17922897	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00086329	chr8	+	6172	38	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	89.7879003888911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17914778	True	NA	15	True	AATAAA	-26	NA	17922989	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938838_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00086330	chr8	+	6271	38	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_23	81.9088199433629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	17914778	True	NA	15	True	AATAAA	-26	NA	17922989	18027758	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00086331	chr8	+	6091	37	NNC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_27	97.2094396358758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTAGTTTGA	17937116	False	NA	4	True	AATAAA	-15	NA	17937175	18027747	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17983232_17983290_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006250_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
WTC11_00086335	chr8	+	1712	3	FSM	ENSG00000171428.15	ENST00000517492.5	2280	3	193	375	193	92	multi-exon	FALSE	canonical	2	7	junction_1	9.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAAAAAGTGGTTTTT	18212022	False	NA	NA	False	ATTAAA	-20	NA	18212414	18223314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18212775_18219410_18219490_18222041
WTC11_00086336	chr8	+	3124	9	NIC	ENSG00000104611.12	novel	3276	10	NA	NA	66	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	17.1828402774396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTGTTACAAGCTTGT	19313727	True	NA	7	True	AATAAA	-16	NA	19313761	19396216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_19313824_19319343_19319729_19332954_19333115_19334685_19334858_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
WTC11_00086337	chr8	+	2522	17	NIC	ENSG00000104613.12	novel	2517	17	NA	NA	41	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	69.7363057793428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTTAAAAATTTAATTC	19813986	True	NA	17	True	AATAAA	-19	NA	19817490	19852066	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_19817667_19818193_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
WTC11_00086341	chr8	+	442	3	FSM	ENSG00000175445.17	ENST00000521994.1	566	3	21	103	21	-103	multi-exon	FALSE	canonical	2	3	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGGTATTTTAAG	19938200	False	NA	NA	False	NA	NA	NA	19939276	19951725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19939529_19948179_19948341_19951696
WTC11_00086343	chr8	+	575	3	FSM	ENSG00000158856.19	ENST00000522340.5	593	3	18	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAACACGTGGAGCTGC	22066448	True	NA	NA	False	NA	NA	NA	22066515	22067648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22066894_22067084_22067160_22067526
WTC11_00086345	chr8	+	1284	3	ISM	ENSG00000158856.19	ENST00000523266.5	2735	16	21638	-7	14328	0	3prime_fragment	FALSE	canonical	2	5	junction_1	7	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCTTTTCCTTATGA	NA	False	NA	7	True	ATTAAA	-20	NA	22080843	22082525	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22080871_22081112_22081194_22081349
WTC11_00086347	chr8	+	2851	18	FSM	ENSG00000158863.22	ENST00000450006.7	2846	18	-5	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	28.8815742077838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGGCTCTGTTCTTGGCC	22087820	True	NA	15	True	AATAAA	-20	NA	22089202	22104382	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792_22103186_22104068
WTC11_00086350	chr8	+	4330	19	FSM	ENSG00000168487.20	ENST00000520970.5	4333	19	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_15	11.596215857866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGTGCCAGATGCT	22164788	True	NA	7	True	AATAAA	-18	NA	22165189	22212324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201117_22201929_22207302_22207517_22209444_22209696_22211593
WTC11_00086352	chr8	+	4351	20	FSM	ENSG00000168487.20	ENST00000520626.6	4351	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	10.6882284381844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACAGCCAATATCCTGT	22164922	False	NA	-3	True	AATAAA	-8	NA	22165323	22212314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176923_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201117_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
WTC11_00086355	chr8	+	2652	21	NNC	ENSG00000197181.12	novel	3488	22	NA	NA	28	-33502	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	7.29657453878188	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTTTTTTTTTTTGT	22274824	True	NA	8	True	AATAAA	-16	NA	22275364	22322014	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
WTC11_00086357	chr8	+	878	4	NNC	ENSG00000120910.15	novel	1598	8	NA	NA	17	2170	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	15.5134350376268	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	22440719	True	NA	7	True	AATAAA	-16	NA	22441094	22477837	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_22441459_22474953_22475152_22475499_22475625_22477646
WTC11_00086358	chr8	+	550	5	FSM	ENSG00000120896.14	ENST00000521787.5	561	5	11	0	11	0	multi-exon	FALSE	canonical	1	3	junction_2	298.131263036938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGTCCCCCAAGTAAGCG	NA	False	NA	NA	False	NA	NA	NA	22564837	22566855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22565074_22565267_22565355_22566344_22566485_22566660_22566714_22566821
WTC11_00086360	chr8	+	1414	9	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	140.049935290953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22578755	False	NA	15	True	AATAAA	-1	NA	22579141	22594298	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22593732
WTC11_00086361	chr8	+	6559	1	FSM	ENSG00000120913.24	ENST00000622226.1	6559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTAGATGTCCCT	22587692	False	NA	7	True	TATAAA	-16	NA	22587731	22594290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22587700_22594300
WTC11_00086365	chr8	+	4617	3	NNC	ENSG00000147454.14	novel	4672	4	NA	NA	1083	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23567845	False	NA	16	True	AATAAA	-16	NA	23567858	23575463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_23568379_23571334_23572204_23572235
WTC11_00086366	chr8	+	7574	2	NNC	ENSG00000147454.14	novel	4672	4	NA	NA	1083	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23567845	False	NA	16	True	AATAAA	-16	NA	23567858	23575463	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_23572204_23572234
WTC11_00086367	chr8	+	244	2	FSM	ENSG00000147459.18	ENST00000478099.1	288	2	44	0	44	0	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTCCTGAAATCATACT	25308772	False	NA	NA	False	NA	NA	NA	25308782	25310507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25308926_25310406
WTC11_00086369	chr8	+	7586	29	ISM	ENSG00000147459.18	ENST00000276440.12	10246	52	157056	-5	-9648	5	3prime_fragment	FALSE	canonical	2	5	junction_5	2.87760529692624	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTTAGTTTGTTAT	NA	False	NA	23	True	ATTAAA	-25	NA	25341744	25415716	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_25341810_25342400_25342508_25345474_25345612_25351730_25351827_25358962_25359062_25363046_25363142_25364625_25364705_25366869_25366971_25368191_25368251_25368570_25368726_25369555_25369642_25372558_25372719_25373617_25373659_25374563_25374655_25377304_25377425_25380304_25380395_25382673_25382779_25389090_25389233_25390205_25390288_25391895_25391981_25392795_25392883_25395542_25395720_25399910_25399995_25400928_25401067_25403557_25403725_25407982_25408155_25408801_25408941_25410098_25410203_25411193
WTC11_00086371	chr8	+	1352	6	FSM	ENSG00000104765.16	ENST00000518611.5	1352	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	403.528735036304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTGTATAAATGATA	26390350	False	NA	70	True	NA	NA	NA	26390361	26411048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26390518_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
WTC11_00086372	chr8	+	4062	31	FSM	ENSG00000120899.18	ENST00000346049.10	4074	31	12	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.47067076450008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	27325500	True	NA	14	True	ATTAAA	-15	NA	27325563	27459386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
WTC11_00086374	chr8	+	1941	17	NIC	ENSG00000120915.14	novel	1959	18	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.622362751813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTGTCTTTGTTCTT	27489519	True	NA	9	True	AATAAA	-17	NA	27491210	27544920	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27516319_27516399_27518037_27518073_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
WTC11_00086375	chr8	+	3897	7	NNC	ENSG00000168077.14	novel	3787	6	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.6806791406896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	27633728	True	NA	17	True	AGTAAA	-16	NA	27633746	27673018	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_27633821_27633865_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27670899
WTC11_00086378	chr8	+	3661	10	NNC	ENSG00000157110.16	novel	3110	10	NA	NA	-1235	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	558.966329956189	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30383241	False	NA	25	True	AATAAA	-20	NA	30383275	30572256	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_30383346_30383823_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
WTC11_00086379	chr8	+	5090	34	NIC	ENSG00000165392.11	novel	7575	35	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_10	18.4185098737324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTTTCATACTGAATA	31027316	True	NA	60	True	AATAAA	-3	NA	31033813	31173738	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
WTC11_00086380	chr8	+	3219	15	ISM	ENSG00000165392.11	ENST00000521620.5	3593	23	31536	356	-776	56	3prime_fragment	FALSE	canonical	3	114	junction_2	11.0157586563754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGTGCTCTGATTTGA	NA	False	NA	21	True	ATTAAA	-18	NA	31119179	31173407	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
WTC11_00086381	chr8	+	252	1	FSM	ENSG00000272128.1	ENST00000607091.1	461	1	122	87	122	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAATTTATCATTGTAA	NA	False	NA	NA	False	NA	NA	NA	38099592	38099844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38099600_38099800
WTC11_00086383	chr8	+	3488	18	NIC	ENSG00000085788.14	novel	4682	18	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	15.6322353490126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTAGTGGCCTACTTTT	38231760	False	NA	17	True	AGTAAA	-19	NA	38231773	38262769	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38261537
WTC11_00086392	chr8	+	3573	19	NIC	ENSG00000104365.16	novel	3938	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	31.3071699278119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	42269986	True	NA	16	True	AATAAA	-26	NA	42271383	42332460	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42271470_42272082_42272206_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
WTC11_00086397	chr8	+	339	2	FSM	ENSG00000248531.3	ENST00000503796.3	343	2	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTAATTATTAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	47164873	47165524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47165108_47165419
WTC11_00086398	chr8	+	2843	19	FSM	ENSG00000164808.17	ENST00000518074.5	2819	19	-24	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_18	46.9198489151683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTATGGACACAGTGAA	47256462	True	NA	NA	False	NA	NA	NA	47260906	47735529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47260992_47279861_47279981_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729103_47735306
WTC11_00086401	chr8	+	4325	4	NNC	ENSG00000169139.12	novel	4342	4	NA	NA	0	73709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1931.19899429229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGTGT	48042981	True	NA	NA	False	NA	NA	NA	48043032	48138417	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_48043182_48049852_48049979_48060681_48064705_48138390
WTC11_00086402	chr8	+	266	1	FSM	ENSG00000272024.1	ENST00000607201.1	407	1	-22	163	-22	-163	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGCATTGTACATTTAGA	NA	False	NA	NA	False	NA	NA	NA	51950261	51950527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_51950300_51950500
WTC11_00086403	chr8	+	3262	12	NIC	ENSG00000137574.11	novel	4477	13	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	55.2881258454664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGATATGTGTTGCTTAA	55768475	True	NA	15	True	ATTAAA	-17	NA	55773429	55825446	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
WTC11_00086404	chr8	+	3159	11	FSM	ENSG00000137574.11	ENST00000523948.5	3159	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	78.2173893709065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATATGTGTTGCTTAATT	55768515	True	NA	17	True	ATTAAA	-19	NA	55773469	55825448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_55773720_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
WTC11_00086407	chr8	+	1957	5	FSM	ENSG00000185942.13	ENST00000674746.1	2032	5	0	75	0	-75	multi-exon	FALSE	canonical	0	0	junction_1	5.43139024560011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCCTAATACCTACA	62248829	True	NA	NA	False	AATAAA	-9	NA	62248853	62946739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_62249128_62579538_62579677_62589713_62589795_62746931_62747130_62945473
WTC11_00086408	chr8	+	1783	1	FSM	ENSG00000254377.7	ENST00000685732.1	982	1	0	-801	0	801	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGACGGAAAATCAACCAA	64379180	False	NA	NA	False	AATGAA	-30	NA	64379231	64381014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_64379200_64381000
WTC11_00086409	chr8	+	566	2	FSM	ENSG00000147573.17	ENST00000517647.1	865	2	122	177	122	10	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTATTGTGTGGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	66152419	66174828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66152628_66174470
WTC11_00086412	chr8	+	2241	14	FSM	ENSG00000147576.17	ENST00000424777.6	2229	14	-12	0	-6	0	multi-exon	FALSE	canonical	2	6	junction_6	8.44754086971837	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	66432362	True	NA	9	True	AATAAA	-14	NA	66432485	66468809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
WTC11_00086413	chr8	+	1000	3	NIC	ENSG00000288596.2	novel	575	3	NA	NA	1	-4	intron_retention	FALSE	canonical	1	2	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCCATCTAATGTTAAT	66666052	True	NA	10	True	AATAAA	-11	NA	66667615	66685556	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_66667702_66679720_66680459_66685380
WTC11_00086420	chr8	+	5504	7	FSM	ENSG00000165084.16	ENST00000348340.6	3571	7	-455	-1478	-185	1478	multi-exon	FALSE	canonical	2	8	junction_6	1.77169096878911	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACATAGAAACTCTTTT	68330734	False	NA	NA	False	AATAAA	-30	NA	68330769	68537305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_68331340_68439498_68439647_68446328_68446461_68468691_68468821_68488022_68488052_68521798_68521972_68532982
WTC11_00086421	chr8	+	4408	21	NIC	ENSG00000137573.14	novel	5551	22	NA	NA	40	-12	combination_of_known_junctions	FALSE	canonical	2	13	junction_20	21.3063370854776	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGTAAACAAAATGAA	69465206	False	NA	NA	False	AATAAA	-2	NA	69466856	69660039	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69658504
WTC11_00086423	chr8	+	567	4	FSM	ENSG00000137573.14	ENST00000531064.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	35.6495285928003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAATGCTTCCCAACACA	NA	False	NA	NA	False	NA	NA	NA	69564047	69589120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_69564148_69575969_69576210_69586356_69586509_69589045
WTC11_00086424	chr8	+	826	2	FSM	ENSG00000246528.4	ENST00000501104.3	1315	2	26	463	23	-462	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATTCAGCAAGAAGC	69834031	True	NA	NA	False	AAAAAG	-42	NA	69834112	69837370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_69834207_69836638
WTC11_00086425	chr8	+	4254	4	FSM	ENSG00000235531.11	ENST00000655314.1	4276	4	22	0	16	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTATTTCCTCCCACC	71843964	True	NA	NA	False	AATATA	-28	NA	71844060	72056178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_71844423_71962922_71963049_71965408_71965535_72052538
WTC11_00086427	chr8	+	2795	9	NIC	ENSG00000147601.15	novel	3268	9	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1686.97317239338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATCCTATATATAAACA	72959244	True	NA	-17	True	NA	NA	NA	73008918	73047708	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943_73027053_73032041_73032134_73039115_73039220_73045960
WTC11_00086431	chr8	+	202	1	FSM	ENSG00000188856.6	ENST00000479228.1	888	1	-68	754	-68	-754	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTACATCATAAATCTGA	NA	False	NA	NA	False	TATAAA	-15	NA	80558801	80559003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_80558800_80559000
WTC11_00086432	chr8	+	700	4	FSM	ENSG00000185015.8	ENST00000522631.1	700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.78423336480244	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGACATAGGAGG	85220912	False	NA	NA	False	AATACA	-1	NA	85220926	85230336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85221126_85224954_85225296_85230084_85230201_85230292
WTC11_00086433	chr8	+	579	5	FSM	ENSG00000253553.8	ENST00000521433.1	579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.20565096031518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAATATTTCCCAAGTC	88327334	True	NA	NA	False	NA	NA	NA	88327843	88709540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_88327899_88328928_88329053_88542679_88542811_88700291_88700350_88709329
WTC11_00086434	chr8	+	654	7	FSM	ENSG00000104325.7	ENST00000517314.5	654	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	148.922145954037	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGGAATGCGATTCA	89996862	True	NA	NA	False	NA	NA	NA	90001445	90042748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90017202_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727
WTC11_00086436	chr8	+	512	2	Antisense	novelGene_ENSG00000104327.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGGCTCAGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	90090121	90095844	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_90090498_90095708
WTC11_00086437	chr8	+	545	2	FSM	ENSG00000214954.8	ENST00000518304.1	571	2	26	0	26	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTCCAGAGTTATGCA	NA	False	NA	NA	False	NA	NA	NA	91101857	91102813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_91102248_91102658
WTC11_00086442	chr8	+	3068	12	FSM	ENSG00000104413.18	ENST00000519505.5	3068	12	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	136.016284878194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94646170	True	NA	20	True	AATAAA	-21	NA	94646196	94707466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
WTC11_00086444	chr8	+	1444	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	41.479579982873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTATTCGTGTTCTTA	94717724	True	NA	123	True	ATTAAA	-16	NA	94719902	94745079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744342
WTC11_00086445	chr8	+	1125	6	FSM	ENSG00000156162.16	ENST00000519176.5	1124	6	-6	5	0	-5	multi-exon	FALSE	canonical	3	26	junction_5	38.3822875816437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTATTCGTGTTCTTA	94726351	False	NA	123	True	ATTAAA	-16	NA	94726395	94745079	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
WTC11_00086446	chr8	+	490	6	FSM	ENSG00000164941.14	ENST00000521860.5	548	6	58	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_1	102.393359159664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTATTTTGGTACTA	94815448	True	NA	NA	False	NA	NA	NA	94823267	94832007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94823302_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991
WTC11_00086447	chr8	+	3033	25	NNC	ENSG00000164941.14	novel	3434	29	NA	NA	-19	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	70.7834015186863	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCAAGCAATCCAGAA	94815448	True	NA	-39	True	NA	NA	NA	94823267	94880142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865701_94867221_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
WTC11_00086448	chr8	+	3027	26	NIC	ENSG00000164941.14	novel	4645	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	69.0779964967138	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTACACAATTAGTGG	94815478	True	NA	13	True	AATAAA	-30	NA	94823297	94880314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94823562_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
WTC11_00086468	chr8	+	4140	4	NNC	ENSG00000178764.8	novel	873	2	NA	NA	1348	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0773956979406	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCCTTCTTTATTGTCG	122782992	False	NA	40	True	AATAAA	-36	NA	122783002	122974522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_122783062_122863476_122863540_122951291_122954029_122973241
WTC11_00086472	chr8	+	909	5	ISM	ENSG00000156831.8	ENST00000517532.5	841	7	26	175260	0	-8	5prime_fragment	FALSE	canonical	3	16	junction_1	54.5819338242976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGGGGAGGGAAATT	125089916	True	NA	-57	True	NA	NA	NA	125091869	125182511	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102
WTC11_00086475	chr8	+	1378	6	FSM	ENSG00000249859.13	ENST00000657667.1	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.7593103391328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795407	True	NA	38	True	ATTAAA	-18	NA	127795753	128101256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
WTC11_00086486	chr8	+	4641	5	Fusion	ENSG00000250571.7_ENSG00000181638.20	novel	1297	3	NA	NA	-366	0	multi-exon	FALSE	canonical	1	4	junction_2	28.3769272473254	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	143247766	False	NA	18	True	AATAAA	-20	NA	143248774	143276931	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_143249551_143249689_143251341_143269359_143269521_143274703_143274803_143274977
WTC11_00086488	chr8	+	924	5	FSM	ENSG00000104518.11	ENST00000531173.1	854	5	-38	-32	-38	0	multi-exon	FALSE	canonical	3	140	junction_4	1.11803398874989	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGGTAGCAGAGTTT	143561667	False	NA	16	True	AATAAA	-16	NA	143561691	143563059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
WTC11_00086490	chr8	+	5372	42	NNC	ENSG00000179832.18	novel	5349	44	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_34	15.8762315845978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	144145326	True	NA	2	True	AATAAA	-15	NA	144148031	144261926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259223_144259355_144259910_144260058_144260185_144260545_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
WTC11_00086492	chr8	+	593	1	NIC	ENSG00000179832.18	novel	1712	12	NA	NA	13750	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATATTGTGTGGGACATT	NA	False	NA	0	True	AATAAA	-11	NA	144212868	144213461	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144212900_144213500
WTC11_00086494	chr8	+	2126	13	NNC	ENSG00000185122.11	novel	2134	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	233.119544916814	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATGGCCTCCATGTGT	144279578	True	NA	31	True	TATAAA	-13	NA	144291605	144314716	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_144291875_144308905_144309015_144309454_144309590_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
WTC11_00086495	chr8	+	1243	2	FSM	ENSG00000185803.12	ENST00000675998.1	1243	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144359923	True	NA	28	True	AATAAA	-15	NA	144359940	144361272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144360714_144360802
WTC11_00086500	chr8	+	4923	5	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	4	-9	intron_retention	FALSE	canonical	3	65	junction_1	79.0079109963047	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTTTGACAAAAACATTT	144516635	True	NA	26	True	AATAAA	-14	NA	144518008	144525163	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910_144523334_144523635
WTC11_00086501	chr8	+	1841	3	NIC	ENSG00000160959.8	novel	1408	3	NA	NA	334	0	intron_retention	FALSE	canonical	3	24	junction_2	22	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	144522843	False	NA	35	True	AATAAA	-23	NA	144522915	144525172	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144523334_144523635_144523810_144523923
WTC11_00086504	chr8	+	1714	5	NIC	ENSG00000147789.16	novel	2760	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	25.7621330638594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	144824912	True	NA	20	True	AATAAA	-17	NA	144827589	144843220	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144827610_144829042_144829091_144829477_144829605_144837390_144837508_144841818
WTC11_00086505	chr8	+	2672	5	NIC	ENSG00000147789.16	novel	2794	5	NA	NA	-4	-85	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	36.1896048610647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGGTGCAGTCTGCA	144824915	True	NA	4	True	AATAAA	-15	NA	144827592	144843687	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144827610_144829042_144829091_144829444_144829605_144837393_144837508_144841354
WTC11_00086507	chr8	-	749	1	FSM	ENSG00000272240.1	ENST00000606572.1	541	1	-161	-47	-161	47	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCCACACACATCCTT	NA	False	NA	NA	False	NA	NA	NA	235048	234299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_234300_235000
WTC11_00086508	chr8	-	496	4	NNC	ENSG00000104714.14	novel	1551	4	NA	NA	6	-18287	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	145.389133018943	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTTGGTTTAGCAAAA	-726122	True	NA	1	True	ATTAAA	-26	NA	731191	692151	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_692314_692477_692613_715860_716008_731139
WTC11_00086509	chr8	-	994	2	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGTGTTATGGTTTAC	-6407034	True	NA	-5	True	AATAAA	-13	NA	6407111	6405407	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_6406372_6407081
WTC11_00086510	chr8	-	1017	3	FSM	ENSG00000246089.4	ENST00000523225.1	1017	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCAGGTCTCTGTTTTA	-6407122	False	NA	NA	False	AATACA	-24	NA	6407142	6405596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6406372_6406527_6406709_6407081
WTC11_00086511	chr8	-	4364	7	FSM	ENSG00000215374.6	ENST00000663272.1	4350	7	1	-15	1	15	multi-exon	TRUE	canonical	0	0	junction_4	4.22952584681651	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCCTCTGTGTCTTA	-7354893	True	NA	NA	False	NA	NA	NA	7355333	7298728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7302172_7323768_7323834_7324296_7324365_7324821_7324961_7325136_7325199_7349082_7349147_7354810
WTC11_00086513	chr8	-	5902	2	NNC	ENSG00000173281.5	novel	5510	2	NA	NA	-388	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAAAGTGTCCTTCT	-9149165	False	NA	NA	False	AATAAA	-13	NA	9151046	9136258	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9141676_9150561
WTC11_00086514	chr8	-	2909	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	-6	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAATTCTTTCATTGGG	-9903356	False	NA	-14	True	AATAAA	-22	NA	9903398	9900057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900199_9900554_9900613_9900688
WTC11_00086516	chr8	-	9116	1	FSM	ENSG00000280294.1	ENST00000624866.1	3352	1	-5765	1	-5765	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACGTGTGTGTGGCTTT	NA	False	NA	-2	True	TATAAA	-16	NA	10865201	10856085	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10856100_10865200
WTC11_00086518	chr8	-	1105	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	-13	7	-13	-7	multi-exon	FALSE	canonical	1	2	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTACCTCTGGCTTGCC	-11347451	True	NA	NA	False	AATAAA	-8	NA	11347515	11345754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11346641_11347296
WTC11_00086519	chr8	-	2393	11	NNC	ENSG00000164733.22	novel	3835	11	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	23	junction_1	133.33326666665	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	-11862840	True	NA	-39	True	NA	NA	NA	11868113	11842559	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_11842689_11844018_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
WTC11_00086521	chr8	-	257	1	FSM	ENSG00000254866.2	ENST00000529497.2	240	1	-145	128	-145	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTAGTAGAAGATCAAAT	NA	False	NA	NA	False	NA	NA	NA	12151279	12151022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12151000_12151300
WTC11_00086522	chr8	-	2255	7	FSM	ENSG00000186523.15	ENST00000529146.6	2258	7	3	0	3	0	multi-exon	FALSE	canonical	2	6	junction_3	17.1431878274984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	-12191828	False	NA	NA	False	AATAAA	-31	NA	12191841	12182095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12188071_12188174_12188310_12188425_12189807_12189889_12191778
WTC11_00086524	chr8	-	248	2	ISM	ENSG00000283674.3	ENST00000636622.1	1014	6	4411	222	4411	-222	3prime_fragment	FALSE	canonical	3	72	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGCAAAACTGTCTCTA	-12601302	False	NA	NA	False	NA	NA	NA	12601315	12595206	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_12595297_12601157
WTC11_00086527	chr8	-	2455	12	NNC	ENSG00000154359.13	novel	3618	12	NA	NA	46	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1966339928421	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCCTTCGACCTCC	-12754342	True	NA	NA	False	AATGAA	-5	NA	12755480	12722985	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12723251_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
WTC11_00086528	chr8	-	2841	8	NNC	ENSG00000198791.12	novel	6890	7	NA	NA	0	-872	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	450.931733826118	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGATTATTCTGTGTGTC	-17238340	True	NA	NA	False	AATAAA	-36	NA	17246855	17225837	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_17226057_17229231_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
WTC11_00086529	chr8	-	1209	7	FSM	ENSG00000198791.12	ENST00000519954.5	1209	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	572.938526855679	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATATAATTAGAGATAC	-17238342	True	NA	NA	False	ATTAAA	-44	NA	17246857	17232328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17243441_17243546_17245035_17245248_17246674
WTC11_00086530	chr8	-	4069	13	FSM	ENSG00000129422.15	ENST00000519263.5	4089	13	20	0	20	0	multi-exon	FALSE	canonical	3	11	junction_11	6.27605679458758	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACGAGAGCATCTTGT	NA	False	NA	NA	False	AAAAAG	-40	NA	17755961	17645661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17743603_17743800_17753716
WTC11_00086531	chr8	-	2708	1	FSM	ENSG00000104763.20	ENST00000637752.1	2708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCCAGTCAGCAGTCA	-18059141	False	NA	-40	True	AATAAA	-13	NA	18059163	18056455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18056500_18059200
WTC11_00086533	chr8	-	2615	8	ISM	ENSG00000168546.11	ENST00000306793.4	3558	9	5920	0	5260	0	3prime_fragment	TRUE	canonical	2	7	junction_5	4.1206300291017	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCCTCGGTCCC	-21782881	False	NA	-4	True	AATAAA	-16	NA	21782899	21692017	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_21693401_21694463_21694518_21702804_21702978_21704984_21705126_21705931_21706042_21750587_21750943_21774971_21775056_21782584
WTC11_00086535	chr8	-	3467	15	NNC	ENSG00000134013.16	novel	3721	14	NA	NA	0	83460	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	65.6390874092439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGCAAACTAAGCCCAA	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23213436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_23213466_23297179_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
WTC11_00086536	chr8	-	3466	15	NNC	ENSG00000134013.16	novel	3721	14	NA	NA	0	83460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6390874092439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGCAAACTAAGCCCAA	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23213436	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_23213465_23297179_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
WTC11_00086537	chr8	-	2568	10	ISM	ENSG00000197217.13	ENST00000417069.6	2063	13	20	3006	20	1102	5prime_fragment	FALSE	canonical	3	133	junction_2	37.2021504754765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAACTTCAAGAAAAG	-23454024	True	NA	NA	False	AATAAA	-11	NA	23457675	23435931	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
WTC11_00086538	chr8	-	1557	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	191	0	191	0	multi-exon	FALSE	canonical	2	9	junction_3	98.8612945270067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	-23853726	False	394	NA	False	NA	NA	NA	23854120	23843913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
WTC11_00086539	chr8	-	7908	16	Fusion	ENSG00000104756.16_ENSG00000147437.10	novel	3367	12	NA	NA	0	6	intron_retention	TRUE	canonical	2	3	junction_3	25.7526697645118	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTAAATCTTTCTCC	-25457783	True	NA	NA	False	AATAAA	-26	NA	25458442	25419251	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_-_25419461_25421572_25421669_25423189_25425761_25426292_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25450379_25450482_25458198
WTC11_00086541	chr8	-	547	3	FSM	ENSG00000240694.9	ENST00000521875.5	590	3	43	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGTTAGAAGCTCAT	-26512958	False	774	NA	False	NA	NA	NA	26512972	26508864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26509244_26509547_26509678_26512934
WTC11_00086542	chr8	-	712	1	FSM	ENSG00000253899.1	ENST00000517322.1	1283	1	189	382	189	-382	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTCTTAAGATGTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	27065089	27064377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27064400_27065100
WTC11_00086543	chr8	-	2807	8	FSM	ENSG00000120885.22	ENST00000522299.5	2807	8	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_3	110.890458911265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	-27614070	True	NA	-29	True	AATAAA	-18	NA	27614693	27597995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
WTC11_00086545	chr8	-	1754	8	NIC	ENSG00000168078.10	novel	1836	8	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	41.2854671272879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGGTGTCTCAGCATT	-27836972	True	NA	-27	True	AATAAA	-41	NA	27837796	27809626	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837709
WTC11_00086546	chr8	-	1775	10	FSM	ENSG00000186918.14	ENST00000523202.5	2068	10	293	0	293	0	multi-exon	FALSE	canonical	1	1	junction_9	24.8347625738352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAAAATATTTTTCCC	-28385053	False	NA	NA	False	TTTAAA	-6	NA	28385104	28348528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28385079
WTC11_00086547	chr8	-	2333	15	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	41.8981393576451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTGTCCTCTGTTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	28859531	28767661	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28837636_28837777_28846746_28846810_28850212_28850274_28859435
WTC11_00086548	chr8	-	2458	17	NNC	ENSG00000104299.15	novel	2549	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	39.5667454278211	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAATTAGCTGTCCTCT	-28887257	True	NA	-12	True	AATAAA	-11	NA	28889934	28767667	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796607_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
WTC11_00086549	chr8	-	7010	24	NIC	ENSG00000197892.13	novel	8743	40	NA	NA	-40563	0	intron_retention	TRUE	canonical	2	4	junction_20	4.88893662499847	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGAGGCCAGTCTT	NA	False	NA	-9	True	AATAAA	-23	NA	29148755	29067277	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_29070767_29071619_29072317_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462_29113556_29116830_29117008_29118867_29118993_29122590_29122647_29123365_29123493_29124023_29124124_29126481_29126512_29127121_29127269_29130532_29130666_29132307_29132466_29134039_29134211_29140062_29140192_29140467_29140618_29142156_29142304_29146377_29146541_29147391_29147603_29148576
WTC11_00086551	chr8	-	2005	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	74	junction_4	119.062541921836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGAGCAAAAACTGGAG	-33510804	True	NA	-12	True	AATAAA	-28	NA	33513109	33498728	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
WTC11_00086552	chr8	-	1701	6	NIC	ENSG00000129696.13	novel	2242	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	123.555007992392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	-33510407	False	NA	-4	True	AATAAA	-19	NA	33512712	33498953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_33499278_33500327_33500491_33503747_33503936_33507228_33507322_33509745_33509933_33511966
WTC11_00086553	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	277.860076697287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	-38175542	True	NA	-36	True	NA	NA	NA	38176716	38163358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
WTC11_00086554	chr8	-	906	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	236.910496460865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-38263493	True	NA	-10	True	AATAAA	-2	NA	38269194	38263129	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
WTC11_00086555	chr8	-	926	8	NNC	ENSG00000147535.17	novel	853	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	242.297843362171	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-38263491	True	NA	-6	True	AATAAA	-18	NA	38269192	38264738	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38264950_38266140_38266312_38267266_38267392_38267605_38267694_38267896_38267961_38268370_38268462_38268881_38268991_38269125
WTC11_00086556	chr8	-	2966	10	ISM	ENSG00000077782.22	ENST00000683948.1	4057	16	48182	0	-75	0	3prime_fragment	FALSE	canonical	3	158	junction_9	222.960385121064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	-38420405	False	NA	-5	True	AATAAA	-19	NA	38420419	38412727	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538
WTC11_00086557	chr8	-	3914	18	NNC	ENSG00000077782.22	novel	5697	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	237.501090873474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCATCGGGTAAGATGC	-38458311	True	NA	32	True	TTTAAA	-19	NA	38468633	38412923	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
WTC11_00086558	chr8	-	1916	1	FSM	ENSG00000239218.2	ENST00000488192.1	1318	1	9	-607	9	607	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTGAGTGTGAATTTG	-38435610	False	NA	NA	False	AATAAA	-23	NA	38435655	38433739	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38433700_38435700
WTC11_00086560	chr8	-	5845	42	NNC	ENSG00000029534.21	novel	8292	43	NA	NA	29817	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	8.73518121384934	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTACTTTTTCCCAACCT	-41767751	False	NA	NA	False	TTTAAA	-18	NA	41767776	41655374	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_41655754_41661875_41661942_41663658_41663743_41668266_41668565_41672353_41672427_41684543_41684691_41686151_41686284_41688155_41688231_41688510_41688590_41690226_41690347_41690473_41690600_41692647_41692877_41693104_41693202_41693897_41694103_41694591_41694804_41695176_41695332_41696362_41696588_41696675_41696774_41698042_41698122_41699451_41699549_41701549_41701623_41702051_41702145_41704040_41704140_41704373_41704473_41706142_41706242_41708777_41708976_41714155_41714255_41714975_41715075_41715651_41715850_41716952_41717052_41717603_41717703_41718105_41718205_41719660_41719859_41723124_41723224_41723534_41723634_41724455_41724555_41725760_41725947_41727249_41727349_41727907_41728007_41733970_41734070_41758035_41758138_41767341
WTC11_00086561	chr8	-	4607	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	-2843	6	-2843	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGGACCGACCGGGAA	NA	False	NA	-13	True	ATTAAA	-9	NA	41832777	41828170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41828200_41832800
WTC11_00086562	chr8	-	3644	8	ISM	ENSG00000083168.11	ENST00000418721.5	3279	10	9000	-1796	-4503	210	3prime_fragment	FALSE	canonical	2	9	junction_3	4.15515416349971	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCTTCAGCCTAGCC	NA	False	NA	NA	False	NA	NA	NA	41949363	41932977	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221
WTC11_00086564	chr8	-	5472	12	NNC	ENSG00000168575.10	novel	3752	11	NA	NA	9423	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	48.8612472988902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	NA	False	NA	-11	True	AATAAA	-16	NA	42525573	42416474	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42471066_42471202_42472101_42472655_42523787
WTC11_00086565	chr8	-	1184	3	NIC	ENSG00000168575.10	novel	411	2	NA	NA	99	350	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCCTTTTTATTTAT	-42540932	False	NA	NA	False	NA	NA	NA	42540955	42534309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42535336_42536354_42536472_42540914
WTC11_00086568	chr8	-	1070	3	NIC	ENSG00000168300.14	novel	1712	3	NA	NA	0	-581	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTATGTTCTCTTTA	-51895499	True	NA	-2	True	AATAAA	-16	NA	51899036	51849525	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_51850087_51860844_51861247_51898929
WTC11_00086569	chr8	-	6838	25	NNC	ENSG00000023287.13	novel	6636	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	101.856508205852	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTCTATTTAATCT	-52710982	True	NA	-11	True	AATAAA	-15	NA	52714427	52622459	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684006_52685398_52685521_52685936_52686157_52686852_52686968_52714074
WTC11_00086570	chr8	-	4814	4	FSM	ENSG00000082556.14	ENST00000265572.8	4954	4	127	13	-98	-13	multi-exon	FALSE	canonical	2	2	junction_2	5.35412613473634	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGAAAATCACAACAGT	-53251398	False	NA	-21	True	AATAAA	-14	NA	53251510	53225736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53229830_53234758_53235112_53250780_53251086_53251447
WTC11_00086571	chr8	-	505	1	FSM	ENSG00000244159.1	ENST00000498403.1	237	1	36	-304	36	304	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGATAGCAGGGCGTT	NA	False	NA	NA	False	NA	NA	NA	53887208	53886703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53886700_53887200
WTC11_00086572	chr8	-	2419	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.121994538508	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086079	True	NA	NA	False	NA	NA	NA	54101828	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046371_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00086573	chr8	-	2445	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.121994538508	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086109	True	NA	NA	False	NA	NA	NA	54101858	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046375_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00086574	chr8	-	2522	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.121994538508	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086179	True	NA	NA	False	NA	NA	NA	54101928	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034770_54046369_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00086575	chr8	-	2518	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.121994538508	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54086179	True	NA	NA	False	NA	NA	NA	54101928	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034768_54046371_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00086576	chr8	-	2545	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	659.30170208714	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54101949	False	NA	NA	False	NA	NA	NA	54102017	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034770_54046369_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
WTC11_00086577	chr8	-	2571	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	636.980221411258	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAGAAATTCCTAAGC	-54101949	False	NA	NA	False	NA	NA	NA	54102017	54034740	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034770_54046369_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
WTC11_00086578	chr8	-	2480	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	2	0	-2	multi-exon	FALSE	canonical	2	49	junction_2	532.612927567708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTGAGTATTTTAATA	-54101949	False	NA	-4	True	AATAAA	-21	NA	54102017	54046369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
WTC11_00086584	chr8	-	1187	2	FSM	ENSG00000181195.11	ENST00000314922.3	1199	2	12	0	12	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTGTAAGTCTCTTTT	-56445944	False	NA	NA	False	AATAAA	-22	NA	56446018	56440953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56441938_56445815
WTC11_00086585	chr8	-	627	1	FSM	ENSG00000253541.1	ENST00000517342.1	1162	1	343	192	343	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCACCTTAAGAGACTT	NA	False	NA	NA	False	NA	NA	NA	56477644	56477017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56477000_56477600
WTC11_00086586	chr8	-	584	5	FSM	ENSG00000104331.9	ENST00000520392.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	64.3525446272329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTGAGTGGTGAAGAAA	-56980092	True	NA	NA	False	NA	NA	NA	56980112	56963925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56964065_56966190_56966353_56967109_56967219_56978049_56978146_56980034
WTC11_00086588	chr8	-	556	10	FSM	ENSG00000198363.18	ENST00000523927.5	556	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.118194282445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTGATATTTTTTGTG	-61680920	False	79	NA	False	ATTAAA	-37	NA	61680999	61583943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61584030_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967
WTC11_00086591	chr8	-	3643	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	0	10915	intron_retention	FALSE	non_canonical	0	0	junction_1	100.101132293249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACATCAAGCATGGAT	-65838355	True	NA	NA	False	NA	NA	NA	65842064	65703418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65703452_65717684_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
WTC11_00086592	chr8	-	3669	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	0	10915	intron_retention	FALSE	non_canonical	0	0	junction_1	100.101132293249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACATCAAGCATGGAT	-65838379	True	NA	NA	False	NA	NA	NA	65842088	65703418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65703452_65717682_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
WTC11_00086593	chr8	-	4237	15	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	-231	10915	intron_retention	FALSE	non_canonical	0	0	junction_1	138.635423367352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGACATCAAGCATGGAT	-65842110	True	NA	NA	False	NA	NA	NA	65842553	65703418	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65703452_65717683_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65780843_65780948_65782782_65782844_65841370
WTC11_00086594	chr8	-	606	1	FSM	ENSG00000213005.3	ENST00000521862.1	606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTCTTAGTGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	66768005	66767399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66767400_66768000
WTC11_00086596	chr8	-	2510	3	NIC	ENSG00000261787.2	novel	2451	4	NA	NA	29	0	intron_retention	FALSE	canonical	2	8	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTAAATTTGCGTTTC	-66962293	True	NA	-7	True	AATAAA	-19	NA	66962562	66946500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_66948165_66961375_66961988_66962328
WTC11_00086597	chr8	-	6887	40	NNC	ENSG00000066777.9	novel	7320	39	NA	NA	341	-8357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.7480927869236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAATTTTTTACATAGT	-67343324	False	3715	NA	False	NA	NA	NA	67343336	67183843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_67183874_67197675_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
WTC11_00086598	chr8	-	422	2	FSM	ENSG00000147596.4	ENST00000426346.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTACCCAATTCCCCACG	-70071598	False	NA	NA	False	NA	NA	NA	70071693	70069561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70069885_70071594
WTC11_00086599	chr8	-	320	1	FSM	ENSG00000253173.3	ENST00000521867.1	382	1	128	-66	128	66	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTCCAGTGGACTGCAT	-70104041	False	NA	NA	False	NA	NA	NA	70104051	70103731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70103700_70104100
WTC11_00086600	chr8	-	717	2	FSM	ENSG00000140396.13	ENST00000524223.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTATCACATCTTC	-70157134	False	NA	NA	False	AATGAA	-41	NA	70157146	70155970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70156666_70157124
WTC11_00086601	chr8	-	247	3	FSM	ENSG00000104313.20	ENST00000422295.1	440	3	193	0	193	0	multi-exon	FALSE	canonical	2	2	junction_2	1	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTCACAGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	71322268	71317658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_71317690_71321733_71321880_71322198
WTC11_00086602	chr8	-	362	2	FSM	ENSG00000178860.9	ENST00000521739.1	362	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGACGAGACGCGGACGC	-71843137	False	NA	NA	False	AAAAAG	-10	NA	71843413	71842419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_71842748_71843379
WTC11_00086603	chr8	-	267	3	FSM	ENSG00000104321.11	ENST00000522271.1	366	3	0	99	0	-99	multi-exon	FALSE	canonical	2	2	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTCAAATTTTAACTT	NA	False	NA	NA	False	AATGAA	-34	NA	72046545	72038864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_72039028_72039726_72039798_72046512
WTC11_00086604	chr8	-	1022	1	FSM	ENSG00000272254.1	ENST00000607665.1	437	1	-422	-163	-422	163	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTGCACTGTATATCCA	NA	False	NA	NA	False	AAAACA	-43	NA	73043768	73042746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73042700_73043800
WTC11_00086605	chr8	-	858	8	NNC	ENSG00000147604.14	novel	1233	7	NA	NA	10	15015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12460.0234579004	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAAGTGTACATAAGAA	-73216361	True	NA	NA	False	AAAAAG	-5	NA	73293623	73275226	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_73275257_73290636_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
WTC11_00086606	chr8	-	863	8	NNC	ENSG00000147604.14	novel	1233	7	NA	NA	0	6037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12460.0234579004	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAATACCATTCATATC	-73216371	True	NA	NA	False	AAAAAG	-2	NA	73293633	73284204	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_73284234_73290640_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
WTC11_00086607	chr8	-	2835	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	17	-9	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	140.942642242747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGAAGCGCTGTTGTT	-73747420	False	NA	-13	True	AGTAAA	-15	NA	73747449	73420377	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73747386
WTC11_00086609	chr8	-	2731	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	-45	534	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	105.375090615488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	-73746919	False	NA	-3	True	AATAAA	-17	NA	73746948	73526834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
WTC11_00086612	chr8	-	1285	1	FSM	ENSG00000253341.1	ENST00000517662.1	1001	1	-284	0	-284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGATCCATCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	74604528	74603243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_74603200_74604500
WTC11_00086613	chr8	-	2215	1	FSM	ENSG00000253919.1	ENST00000520248.1	2290	1	78	-3	78	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTAAAAACAGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	78762353	78760138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_78760100_78762400
WTC11_00086615	chr8	-	489	1	FSM	ENSG00000272518.1	ENST00000606512.1	917	1	371	57	371	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCATGTGTACCCCTGA	NA	False	NA	NA	False	NA	NA	NA	79957010	79956521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79956500_79957000
WTC11_00086616	chr8	-	8516	5	NIC	ENSG00000076554.16	novel	4116	8	NA	NA	-76	0	intron_retention	FALSE	canonical	3	856	junction_1	67.4258852370512	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-80171634	False	NA	1	True	AATACA	-23	NA	80171649	80034744	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
WTC11_00086617	chr8	-	551	1	FSM	ENSG00000237264.4	ENST00000517577.2	551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCAGGCTAATTTCCC	NA	False	NA	NA	False	AATGAA	-5	NA	81522232	81521681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81521700_81522200
WTC11_00086618	chr8	-	954	9	NIC	ENSG00000133731.10	novel	3369	9	NA	NA	2	-18	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	60.5545982977346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTATGATATGCTTGG	-81683926	True	NA	NA	False	NA	NA	NA	81686280	81659279	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680780_81681497_81681585_81686251
WTC11_00086620	chr8	-	891	2	FSM	ENSG00000104231.11	ENST00000519338.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGAATTATAGAAACTT	NA	False	NA	NA	False	TATAAA	-11	NA	81703128	81702158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81702890_81702968
WTC11_00086621	chr8	-	742	4	FSM	ENSG00000104497.15	ENST00000519119.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.39934634239519	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGATAGACCATCTAC	-81841650	True	NA	NA	False	NA	NA	NA	81842302	81839680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81839752_81839838_81840083_81840197_81840444_81842121
WTC11_00086622	chr8	-	983	1	FSM	ENSG00000260493.1	ENST00000566000.1	1264	1	80	201	59	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAATAAAAAAAAAAAAGAT	-85176932	False	NA	NA	False	NA	NA	NA	85176982	85175999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85176000_85177000
WTC11_00086623	chr8	-	1545	3	FSM	ENSG00000253549.6	ENST00000521761.6	2042	3	306	191	-189	125	multi-exon	FALSE	canonical	1	1	junction_2	1	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAATTATGAATATCATT	-85464592	False	NA	NA	False	AAGAAA	-36	NA	85464609	85440786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85442238_85462735_85462802_85464581
WTC11_00086624	chr8	-	924	5	FSM	ENSG00000176623.12	ENST00000517710.5	898	5	-26	0	-26	0	multi-exon	FALSE	canonical	1	4	junction_1	121.955678424582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATGTACTTAGCAGT	-86479027	False	NA	NA	False	AATAAA	-28	NA	86479037	86468256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86468708_86470217_86470411_86474819_86474954_86477293_86477325_86478922
WTC11_00086626	chr8	-	780	5	NNC	ENSG00000156103.16	novel	551	5	NA	NA	28	5594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7711712467224	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTGGAATGAGCTTC	-88327117	False	NA	NA	False	AAAACA	-14	NA	88327178	88162328	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_88162428_88167668_88167974_88186475_88186599_88197157_88197307_88327074
WTC11_00086627	chr8	-	950	1	FSM	ENSG00000271156.1	ENST00000604955.1	591	1	-94	-265	-94	265	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTCTATTTCCATATG	NA	False	NA	NA	False	ATTAAA	-4	NA	88809002	88808052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88808100_88809000
WTC11_00086628	chr8	-	835	3	FSM	ENSG00000251136.10	ENST00000524166.1	836	3	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGTAAAATATGGATGA	NA	False	NA	NA	False	NA	NA	NA	89617156	89611355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89611990_89615182_89615306_89617078
WTC11_00086629	chr8	-	3938	1	FSM	ENSG00000251136.10	ENST00000621883.1	3802	1	-269	133	-269	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGAGCAAACCTGAACC	NA	False	NA	NA	False	NA	NA	NA	89721469	89717531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89717500_89721500
WTC11_00086630	chr8	-	696	2	FSM	ENSG00000251136.10	ENST00000523859.2	1525	2	19	810	19	432	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCAATAAAGCTTTTAA	-89757320	False	NA	NA	False	NA	NA	NA	89757364	89756234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89756611_89757044
WTC11_00086631	chr8	-	1108	1	FSM	ENSG00000207359.1	ENST00000384629.1	104	1	-1054	50	-1054	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCTTCCCAAGGATAAC	-89901543	False	NA	NA	False	TATAAA	-10	NA	89901878	89900770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89900800_89901900
WTC11_00086632	chr8	-	2331	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082407	True	NA	-1	True	AATAAA	-22	NA	90082867	90058607	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
WTC11_00086641	chr8	-	3142	16	NNC	ENSG00000197275.14	novel	3074	15	NA	NA	0	-6	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_13	60.0631519504448	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTATAATTGTTAATAA	-94471951	True	NA	-8	True	AATAAA	-14	NA	94475062	94371966	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94418655_94418784_94458267_94458437_94467404_94467556_94475000
WTC11_00086642	chr8	-	540	3	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	35	-62	multi-exon	FALSE	canonical	1	4	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAACTTTTCTGTAA	-94639101	False	331	-7	True	AATAAA	-30	NA	94639432	94637346	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_94637743_94638036_94638108_94639359
WTC11_00086648	chr8	-	3390	12	FSM	ENSG00000070756.17	ENST00000677892.1	3429	12	39	0	39	0	multi-exon	FALSE	canonical	3	6734	junction_10	746.012607076687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	-100716137	False	NA	NA	False	NA	NA	NA	100716273	100702050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461
WTC11_00086650	chr8	-	3191	7	NIC	ENSG00000164924.18	novel	3007	6	NA	NA	3	3	intron_retention	FALSE	canonical	3	15	junction_6	1945.44327996361	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGTCTTTATTTCCA	-100945855	True	NA	-33	True	AATAAA	-14	NA	100953385	100918575	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849_100953058_100953268
WTC11_00086670	chr8	-	667	5	NIC	ENSG00000177570.15	novel	780	5	NA	NA	4	-70	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.7579760163048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCACTTTGTTTGATG	-118620450	True	NA	NA	False	NA	NA	NA	118621934	118375770	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_118375857_118379559_118379701_118439831_118439962_118580714_118580894_118621803
WTC11_00086676	chr8	-	569	6	FSM	ENSG00000189376.12	ENST00000519791.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	57.2174798466343	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTGAAGACAAGTGG	-123237338	True	NA	NA	False	NA	NA	NA	123241286	123220194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123220298_123226499_123226633_123231721_123231758_123237797_123237942_123239048_123239145_123241229
WTC11_00086677	chr8	-	485	3	FSM	ENSG00000189376.12	ENST00000517760.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	75.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATCACCAAGGCGGCCT	-123227644	False	28	NA	False	NA	NA	NA	123231592	123226359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123226419_123226499_123226633_123231299
WTC11_00086692	chr8	-	4778	17	FSM	ENSG00000066827.16	ENST00000523243.5	4774	17	0	-4	0	0	multi-exon	TRUE	canonical	1	1	junction_5	5.75407464324195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTTCTTCAGGCGG	-134712714	True	NA	-3	True	AATAAA	-18	NA	134713049	134477787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_134478722_134509618_134509750_134512474_134512602_134520882_134521002_134532833_134532973_134564986_134565153_134565332_134565422_134583831_134584006_134588245_134588396_134590267_134590356_134600435_134600669_134601476_134602934_134608728_134608880_134610469_134610656_134637460_134637713_134657560_134657738_134712844
WTC11_00086694	chr8	-	4433	33	FSM	ENSG00000169398.19	ENST00000340930.7	4414	33	0	-19	0	3	multi-exon	FALSE	canonical	0	0	junction_4	155.031672041353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-141001124	False	NA	-4	True	ATTAAA	-34	NA	141001158	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675429_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
WTC11_00086695	chr8	-	4709	32	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	156.491940263151	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993173	True	NA	-4	True	ATTAAA	-34	NA	141001217	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140920813_140921133_140925660_140925750_141001124
WTC11_00086696	chr8	-	4302	31	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	90	junction_28	110.390740352421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993189	True	NA	-4	True	ATTAAA	-34	NA	141001233	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_140925660_140925750_141001124
WTC11_00086697	chr8	-	4231	30	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	159.803007446858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993189	True	NA	-4	True	ATTAAA	-34	NA	141001233	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_140948665_140948724_141001124
WTC11_00086698	chr8	-	4529	33	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	135.708888226785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	-140993240	True	NA	-4	True	ATTAAA	-34	NA	141001284	140658385	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
WTC11_00086708	chr8	-	2179	10	FSM	ENSG00000104529.19	ENST00000442189.6	2207	10	28	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	1803.933384114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578578	True	NA	-34	True	ATTAAA	-14	NA	143597387	143579727	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143590607_143590739_143597347
WTC11_00086712	chr8	-	5539	36	NIC	ENSG00000180900.20	novel	5607	37	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_16	91.0604195026577	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTCTGCCTGTCCAT	-143815728	False	NA	-6	True	AATAAA	-16	NA	143815801	143790924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804954_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
WTC11_00086717	chr8	-	1377	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	182.891873794327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103828	False	NA	-6	True	ATTAAA	-16	NA	144104096	144098636	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103846
WTC11_00086723	chr8	-	1746	6	FSM	ENSG00000160948.14	ENST00000528142.5	1821	6	96	-21	96	0	multi-exon	FALSE	canonical	3	277	junction_4	30.348640826238	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTGCCCTGTGTAT	-144422819	False	NA	-6	True	AATAAA	-34	NA	144426887	144423600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025
WTC11_00086728	chr8	-	3809	21	NNC	ENSG00000160957.15	novel	3819	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	90.8610340024809	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	-144512940	True	NA	-21	True	AATAAA	-15	NA	144517833	144511293	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515454_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
WTC11_00086730	chr8	-	3627	4	ISM	ENSG00000198169.9	ENST00000292562.12	2953	5	-75	2	-75	-2	intron_retention	FALSE	canonical	3	39	junction_1	14.0079342596338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTGGGCTTTGA	-144755484	False	NA	-7	True	AATAAA	-18	NA	144755606	144720910	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695
WTC11_00086731	chr8	-	679	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	0	1615	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	23.8156986040721	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTACACTTAAAGTGAA	-144755107	True	NA	NA	False	NA	NA	NA	144755441	144751838	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
WTC11_00086733	chr8	-	1601	5	NNC	ENSG00000196150.14	novel	6337	6	NA	NA	0	3085	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	25.5770893574699	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAAATCATTTTGTTTC	-144899330	True	NA	-10	True	ATTAAA	-10	NA	144901453	144886601	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144887811_144889580_144889695_144889932_144890060_144890307_144890404_144901398
WTC11_00086734	chr8	-	689	3	FSM	ENSG00000196150.14	ENST00000527049.1	610	3	-79	0	-79	0	multi-exon	FALSE	canonical	0	0	junction_2	37.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGAAACCTATGGGAAT	NA	False	NA	NA	False	NA	NA	NA	144902247	144889965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144890060_144890307_144890404_144901748
WTC11_00086737	chr8	+	3513	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTTTGTGTCTTGT	NA	False	NA	14	True	AATAAA	-33	NA	12550562	12554075	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12550600_12554100
WTC11_00086738	chr8	+	362	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGACTTGGGCATGTT	NA	False	NA	NA	False	NA	NA	NA	79387223	79387585	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79387200_79387600
WTC11_00086739	chr8	+	452	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCATCACGAGGTGGAT	NA	False	NA	NA	False	NA	NA	NA	79388197	79388649	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79388200_79388600
WTC11_00086744	chr9	+	340	3	FSM	ENSG00000107099.18	ENST00000474772.2	359	3	0	19	0	-19	multi-exon	FALSE	canonical	2	3	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGAAAGCAAAGAAAAAT	NA	False	NA	NA	False	AAAAAG	-1	NA	311979	325737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_312167_317042_317129_325670
WTC11_00086745	chr9	+	500	1	FSM	ENSG00000235330.2	ENST00000598100.1	674	1	-40	214	-40	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCACAGAACTCTCTGG	476812	False	NA	NA	False	NA	NA	NA	477709	478209	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_477700_478200
WTC11_00086746	chr9	+	5364	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	-294	0	182	0	multi-exon	FALSE	canonical	3	97	junction_1	23.5810541686007	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	NA	False	NA	14	True	AATAAA	-16	NA	504400	746103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
WTC11_00086747	chr9	+	5348	14	FSM	ENSG00000107104.21	ENST00000674102.1	5348	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	59.5405485621095	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	502498	True	NA	14	True	AATAAA	-16	NA	504694	746103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_539515_539634_540507_540668_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
WTC11_00086748	chr9	+	7200	11	FSM	ENSG00000107104.21	ENST00000489369.5	7193	11	-7	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	23.9549577332126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	502498	True	NA	14	True	AATAAA	-16	NA	504694	746103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
WTC11_00086749	chr9	+	5257	11	FSM	ENSG00000107104.21	ENST00000382293.7	5249	11	-9	1	-9	0	multi-exon	FALSE	canonical	2	8	junction_1	46.7552136130293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTGTCCCTGTTTCA	706786	False	NA	13	True	AATAAA	-15	NA	706879	746102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_707248_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
WTC11_00086750	chr9	+	2266	5	FSM	ENSG00000107104.21	ENST00000688321.1	2889	5	637	-14	585	0	multi-exon	FALSE	canonical	3	150	junction_3	9.52299847737046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCCCTGTTTCATC	734730	False	NA	15	True	AATAAA	-17	NA	734747	746104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_734836_738284_738505_740791_740935_742204_742406_744490
WTC11_00086751	chr9	+	7079	4	FSM	ENSG00000080503.24	ENST00000636559.1	6853	4	-76	-150	-10	-18	multi-exon	FALSE	canonical	3	19	junction_1	3.68178700572909	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTCGTTGTATGGT	2014692	True	NA	2	True	AATAAA	-18	NA	2015270	2046019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465
WTC11_00086752	chr9	+	5770	33	FSM	ENSG00000080503.24	ENST00000357248.8	5855	33	85	0	-10	0	multi-exon	FALSE	canonical	3	16	junction_4	15.0119418609819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCAGCCTCTTTCTTT	2014692	True	NA	11	True	AATAAA	-18	NA	2015270	2193620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2047228_2047485_2054596_2054724_2056671_2056846_2058290_2058465_2060815_2060987_2070417_2070472_2073211_2073343_2073565_2073624_2076228_2076330_2077628_2077777_2081831_2081996_2083346_2083414_2084085_2084197_2086828_2087072_2088499_2088614_2096656_2096765_2097384_2097472_2101569_2101617_2104002_2104170_2110253_2110418_2115821_2116050_2119457_2119536_2123718_2123938_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
WTC11_00086753	chr9	+	5748	34	FSM	ENSG00000080503.24	ENST00000349721.8	5748	34	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_29	15.7950021735963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCAGCCTCTTTCTTT	2014768	True	NA	11	True	AATAAA	-18	NA	2015346	2193620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2047228_2047485_2054596_2054724_2056671_2056846_2058290_2058465_2060815_2060987_2070417_2070472_2073211_2073343_2073565_2073624_2076228_2076330_2077628_2077777_2081831_2081996_2083346_2083414_2084085_2084197_2086828_2087072_2088499_2088614_2096656_2096765_2097384_2097472_2101569_2101617_2104002_2104170_2110253_2110418_2115821_2116050_2119457_2119536_2123718_2123938_2161685_2161904_2170418_2170473_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
WTC11_00086755	chr9	+	1818	7	ISM	ENSG00000080503.24	ENST00000302401.8	2242	8	1259	0	43	0	3prime_fragment	FALSE	canonical	3	7	junction_1	23.2623921574908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCTTTCTTTGAAT	2159703	False	NA	15	True	AATAAA	-22	NA	2159714	2193624	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_2159910_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
WTC11_00086757	chr9	+	5735	18	FSM	ENSG00000147852.17	ENST00000681306.1	5723	18	-12	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	21.126902772561	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTCTTGATGAATA	2622011	False	NA	NA	False	TTTAAA	-18	NA	2622040	2656916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
WTC11_00086758	chr9	+	3231	18	NIC	ENSG00000147852.17	novel	9213	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	57.0634928350243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGTTTGTGCCTGTTCC	2622023	False	NA	10	True	ATTAAA	-14	NA	2622052	2654480	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
WTC11_00086759	chr9	+	4443	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCCTCTTGATGCCT	3528262	False	NA	NA	False	AATAAA	-22	NA	3528280	3532723	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_3528300_3532700
WTC11_00086760	chr9	+	3793	12	FSM	ENSG00000106688.12	ENST00000262352.8	3698	12	-262	167	-262	-167	multi-exon	FALSE	canonical	3	52	junction_7	7.18929415264274	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTAGGTTGCCCCAATT	4490018	True	NA	NA	False	TATAAA	-45	NA	4490205	4587302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4490771_4544566_4544708_4561448_4561542_4564343_4564459_4566046_4566090_4567668_4567768_4572203_4572389_4573906_4574015_4576000_4576124_4576568_4576764_4583037_4583173_4585311
WTC11_00086761	chr9	+	2975	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	3	-13	3	13	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAATTTTTGCC	4661136	True	NA	27	True	AATAAA	-33	NA	4662296	4665271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4662300_4665300
WTC11_00086762	chr9	+	3501	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	163	junction_2	18.3484785926972	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	4675692	True	NA	5	True	AATAAA	-18	NA	4679567	4708399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
WTC11_00086764	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	16.4083629591742	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	4790234	True	NA	75	True	ATTAAA	-17	NA	4792943	4861066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
WTC11_00086766	chr9	+	6939	25	FSM	ENSG00000096968.14	ENST00000381652.4	7023	25	88	-4	88	4	multi-exon	TRUE	canonical	1	1	junction_1	4.59600520984136	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTGTGTTTATGCCA	4985344	False	NA	NA	False	AATAAA	-25	NA	4985359	5129952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4985631_4985939_4986023_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677_5066790_5069021_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
WTC11_00086767	chr9	+	362	1	FSM	ENSG00000228097.1	ENST00000428071.1	670	1	55	253	55	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAATCATTGAAACCATT	NA	False	NA	NA	False	NA	NA	NA	5099614	5099976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5099600_5100000
WTC11_00086768	chr9	+	3954	22	FSM	ENSG00000107036.12	ENST00000251879.10	4127	22	0	173	0	-173	multi-exon	FALSE	canonical	3	41	junction_3	9.60300406512618	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAAGTTGAGAACTG	5628734	False	NA	NA	False	NA	NA	NA	5629024	5769501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969
WTC11_00086769	chr9	+	6786	26	FSM	ENSG00000107036.12	ENST00000414202.7	6786	26	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_3	10.178722906141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTTTATTCATCATCT	5627910	True	NA	76	True	AATAAA	-14	NA	5629106	5776557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
WTC11_00086770	chr9	+	564	3	FSM	ENSG00000107036.12	ENST00000490816.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTCATTTTTAAGCTA	5770193	True	NA	NA	False	NA	NA	NA	5770205	5773204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5770279_5772563_5772742_5772891
WTC11_00086771	chr9	+	255	1	FSM	ENSG00000233846.2	ENST00000456723.1	487	1	133	99	133	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATCCGGTCACCTTCCA	NA	False	NA	NA	False	TTTAAA	-24	NA	6278799	6279054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6278800_6279100
WTC11_00086772	chr9	+	3576	16	FSM	ENSG00000147854.17	ENST00000276893.10	3576	16	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_4	10.7732178211629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	6411124	True	NA	15	True	AATAAA	-20	NA	6413198	6507054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6413644_6420911_6421143_6433913_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
WTC11_00086773	chr9	+	802	3	FSM	ENSG00000147854.17	ENST00000381373.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATGGCAGTTTTGCTTT	6413389	False	NA	NA	False	AATAAA	-15	NA	6413417	6422979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6413644_6420911_6421143_6422634
WTC11_00086776	chr9	+	2859	4	FSM	ENSG00000147854.17	ENST00000492853.1	2859	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	NA	False	NA	15	True	AATAAA	-20	NA	6498351	6507054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6499932_6500551_6500710_6504592_6504692_6506032
WTC11_00086778	chr9	+	209	1	FSM	ENSG00000264530.2	ENST00000583862.2	260	1	-96	147	-96	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTGGTGACAGAGCA	NA	False	NA	NA	False	NA	NA	NA	6541997	6542206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6542000_6542200
WTC11_00086779	chr9	+	795	1	FSM	ENSG00000237158.1	ENST00000451028.1	517	1	-244	-34	-244	34	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCCCAGCACTTTGGG	NA	False	NA	NA	False	NA	NA	NA	6568599	6569394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6568600_6569400
WTC11_00086780	chr9	+	633	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	28	245	7	-245	multi-exon	FALSE	canonical	3	66	junction_2	14.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	6643552	True	NA	16	True	AATAAA	-16	NA	6645848	6670635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6646086_6669543_6669729_6670424
WTC11_00086781	chr9	+	331	1	FSM	ENSG00000232946.1	ENST00000427308.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	-33	True	NA	NA	NA	6675283	6675614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6675300_6675600
WTC11_00086782	chr9	+	4868	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	-530	0	-198	0	multi-exon	FALSE	canonical	3	72	junction_12	11.8300512838569	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	6757250	False	NA	6	True	AATAAA	-18	NA	6757442	7175648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
WTC11_00086784	chr9	+	4092	21	NIC	ENSG00000107077.19	novel	4338	22	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	23.6715018534946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTGTCTCTGACTT	6757466	False	NA	2	True	AATAAA	-14	NA	6758105	7175644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
WTC11_00086785	chr9	+	4099	18	FSM	ENSG00000107077.19	ENST00000543771.5	3332	18	-547	-220	-45	220	multi-exon	FALSE	canonical	1	1	junction_17	24.6462866648666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAACAACTCTTTCAT	6757403	False	NA	NA	False	NA	NA	NA	6757595	7077483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7076433
WTC11_00086786	chr9	+	1809	1	FSM	ENSG00000230581.2	ENST00000446382.2	1122	1	-391	-296	-391	296	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTCCTAAAAGCCACCC	NA	False	NA	NA	False	NA	NA	NA	6834064	6835873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6834100_6835900
WTC11_00086788	chr9	+	452	1	FSM	ENSG00000212829.8	ENST00000470205.2	348	1	-25	-79	-25	79	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAAATAGCTGCGTAT	NA	False	NA	NA	False	AATAAA	-28	NA	9090872	9091324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_9090900_9091300
WTC11_00086789	chr9	+	232	1	FSM	ENSG00000265735.2	ENST00000581458.2	321	1	3	86	3	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAATGCTACTGGT	NA	False	NA	NA	False	NA	NA	NA	9442062	9442294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_9442100_9442300
WTC11_00086792	chr9	+	5601	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-93	-2508	49	1674	multi-exon	TRUE	canonical	3	322	junction_4	16.5184555876147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422782	15464134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
WTC11_00086794	chr9	+	2544	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	-20	0	-20	0	multi-exon	FALSE	canonical	3	121	junction_9	74.8242384970717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	15415713	True	NA	9	True	TATAAA	-16	NA	15422848	15462460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
WTC11_00086796	chr9	+	2181	6	FSM	ENSG00000164989.17	ENST00000432954.1	2181	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.8	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTGGTGATTTCGAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	15777767	15876083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15777827_15778967_15779151_15784508_15784695_15846701_15846848_15848892_15848948_15874531
WTC11_00086797	chr9	+	590	1	NIC	ENSG00000234779.1	novel	428	3	NA	NA	121	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726530	True	NA	4	True	AATAAA	-17	NA	16726934	16727524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_16726900_16727500
WTC11_00086798	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	17132792	True	NA	0	True	AATAAA	-8	NA	17134981	17168556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17135426_17143287_17143377_17166817
WTC11_00086802	chr9	+	2617	9	FSM	ENSG00000107295.10	ENST00000380607.5	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	4.70206071845101	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTCTGCTCCTTCA	17578463	True	NA	16	True	AATAAA	-18	NA	17579065	17797124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17579288_17747065_17747135_17761436_17761510_17786380_17786525_17787379_17787514_17789391_17789551_17791230_17791335_17793366_17793498_17795543
WTC11_00086804	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	19044253	True	NA	10	True	AATAAA	-19	NA	19049426	19051025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19049400_19051000
WTC11_00086805	chr9	+	8935	32	FSM	ENSG00000137145.21	ENST00000602925.5	6831	32	-28	-2076	-28	653	multi-exon	FALSE	canonical	1	17	junction_17	11.9875065036403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATGTTTTGTGCATCA	19230358	False	NA	NA	False	NA	NA	NA	19230406	19374934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
WTC11_00086806	chr9	+	8387	33	FSM	ENSG00000137145.21	ENST00000434457.7	8143	33	0	-244	0	244	multi-exon	FALSE	canonical	1	9	junction_19	16.5584900806203	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTCGATAGCGATTTT	19228077	True	NA	NA	False	NA	NA	NA	19230692	19374525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19336685_19336833_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
WTC11_00086808	chr9	+	5224	5	ISM	ENSG00000260912.1_ENSG00000177076.6	ENST00000340967.3	2773	6	14886	-2668	14886	0	3prime_fragment	FALSE	canonical	2	8	junction_2	2.06155281280883	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTCCTTGTTGGTTT	NA	False	NA	10	True	ATTAAA	-15	NA	19423894	19455173	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_19423977_19424699_19424842_19434946_19435085_19446280_19446419_19450449
WTC11_00086810	chr9	+	6275	44	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	0	0	intron_retention	TRUE	canonical	1	41	junction_35	37.361795081967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	20656367	True	NA	12	True	AGTAAA	-12	NA	20658308	20995948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658827_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00086811	chr9	+	6009	45	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	1	41	junction_36	41.4232524931039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGACTTTTGTTTTA	20656409	True	NA	19	True	AGTAAA	-19	NA	20658350	20995955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658460_20658690_20658827_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00086814	chr9	+	5764	43	ISM	ENSG00000188352.13	ENST00000338382.11	5794	44	31063	-5	-10964	0	3prime_fragment	FALSE	canonical	1	41	junction_34	33.4480678459965	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGACTTTTGTTTTA	NA	False	NA	19	True	AGTAAA	-19	NA	20715321	20995955	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00086815	chr9	+	4195	32	FSM	ENSG00000188352.13	ENST00000605086.5	4195	32	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_23	34.6545611084479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	NA	False	NA	12	True	AGTAAA	-12	NA	20820293	20995948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00086816	chr9	+	1063	1	FSM	ENSG00000188352.13	ENST00000604828.1	1973	1	838	72	838	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACTGTGATTAGGAAC	NA	False	NA	-71	True	AAGAAA	-35	NA	20874680	20875743	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_20874700_20875700
WTC11_00086817	chr9	+	254	1	FSM	ENSG00000226393.1	ENST00000436840.1	528	1	-59	333	-59	-333	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCGCATGGCACCAAATT	NA	False	NA	NA	False	NA	NA	NA	21321240	21321494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21321200_21321500
WTC11_00086818	chr9	+	840	1	FSM	ENSG00000229835.2	ENST00000427983.2	1768	1	73	855	73	-855	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCAGAGCCTCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	21695248	21696088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21695200_21696100
WTC11_00086819	chr9	+	1446	8	FSM	ENSG00000099810.21	ENST00000460874.6	1434	8	-12	0	-6	0	multi-exon	FALSE	canonical	3	29	junction_1	101.436015823387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAATCTCTACTTTCCT	21795421	True	NA	10	True	AATAAA	-7	NA	21802629	21862320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21802951_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
WTC11_00086820	chr9	+	6674	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	-26	-616	-26	616	multi-exon	TRUE	canonical	3	294	junction_1	15.8655061600406	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTCAAAAAAAAAAAGATG	21795401	True	NA	3	True	GATAAA	-6	NA	21802609	21867697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
WTC11_00086823	chr9	+	5005	1	FSM	ENSG00000099810.21	ENST00000616982.1	2350	1	618	-3273	618	-1639	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACTAACAAAAGCCAGA	NA	False	NA	NA	False	AATAAA	-22	NA	21931007	21936012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21931000_21936000
WTC11_00086824	chr9	+	5602	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	-20	4	-20	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTTGTGTTTATGCTA	22446563	True	NA	6	True	AATAAA	-10	NA	22446803	22455736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22447733_22451063
WTC11_00086825	chr9	+	219	1	FSM	ENSG00000236739.3	ENST00000453177.2	535	1	61	255	61	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTTTTCTAAACGTAA	NA	False	NA	NA	False	NA	NA	NA	22747760	22747979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22747800_22748000
WTC11_00086826	chr9	+	2175	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	-12	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	36.8318782797963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	26947273	True	NA	8	True	AATAAA	-14	NA	26947299	27062925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
WTC11_00086827	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	14.2712154362444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	26954224	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
WTC11_00086828	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	41.5384615384615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	26954291	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
WTC11_00086830	chr9	+	4745	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	-62	0	14	0	multi-exon	FALSE	canonical	2	6	junction_5	3.40666580410032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	27108962	True	NA	14	True	AATAAA	-23	NA	27109162	27230174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
WTC11_00086831	chr9	+	1049	1	FSM	ENSG00000215210.3	ENST00000434705.1	1168	1	232	-113	232	113	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTCCCTGTTAAG	NA	False	NA	NA	False	ACTAAA	-20	NA	30689336	30690385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_30689300_30690400
WTC11_00086832	chr9	+	3611	22	FSM	ENSG00000122729.19	ENST00000379923.5	3601	22	-10	0	7	0	multi-exon	FALSE	canonical	1	1	junction_1	179.231858097036	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGACTTTGAGTTTTG	32379486	True	NA	11	True	AATGAA	-24	NA	32384609	32450836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32384736_32386370_32386439_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
WTC11_00086833	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_5	45.4502750266706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	32379519	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
WTC11_00086834	chr9	+	1103	3	FSM	ENSG00000235453.12	ENST00000450093.3	585	3	-518	0	14	0	multi-exon	FALSE	canonical	1	1	junction_1	248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	32551122	True	NA	9	True	AATAAA	-18	NA	32551157	32553007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32551808_32552233_32552480_32552800
WTC11_00086835	chr9	+	668	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTTTGCATTATCCT	32550884	True	NA	14	True	AATAAA	-23	NA	32552344	32553012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32552300_32553000
WTC11_00086838	chr9	+	4704	2	FSM	ENSG00000188133.6	ENST00000342743.6	5342	2	-7	645	-7	-645	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTTTGTATGTTTTTTT	32783494	True	NA	NA	False	NA	NA	NA	32783532	32788556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32783806_32784125
WTC11_00086839	chr9	+	267	1	FSM	ENSG00000223807.1	ENST00000418151.1	400	1	57	76	57	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACCTCCATGCCCCCG	NA	False	NA	NA	False	NA	NA	NA	32926107	32926374	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32926100_32926400
WTC11_00086840	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_5	122.308779325116	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	32987745	True	NA	14	True	AATATA	-22	NA	33025272	33039907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
WTC11_00086841	chr9	+	1849	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	52	0	-51	multi-exon	FALSE	canonical	3	766	junction_1	55.8120022202817	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTCATGTGTCTG	33252155	True	NA	NA	False	NA	NA	NA	33265048	33282018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
WTC11_00086842	chr9	+	3623	16	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	34.4012919654028	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	33286793	True	NA	15	True	AATAAA	-15	NA	33290431	33348723	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347665
WTC11_00086845	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	22.4267697183522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	33286906	True	NA	15	True	AATAAA	-15	NA	33290544	33348723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
WTC11_00086846	chr9	+	1697	8	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	60.7547764142282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTGTACAGTTGAGA	NA	False	NA	23	True	AATAAA	-23	NA	33319020	33348731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33319128_33328580_33328679_33332471_33332503_33338506_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
WTC11_00086847	chr9	+	364	4	FSM	ENSG00000230453.10	ENST00000474881.6	420	4	0	56	0	-56	multi-exon	FALSE	canonical	3	11	junction_3	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGACACCTGAGTGAACT	33533424	False	NA	NA	False	AATGAA	-32	NA	33533441	33539502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33533546_33534369_33534508_33536877_33536946_33539448
WTC11_00086848	chr9	+	536	6	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	9235	31786	44	1669	internal_fragment	FALSE	canonical	3	11	junction_3	3.86781592116274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	33533468	False	NA	NA	False	AAAAAG	-45	NA	33533485	33541227	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
WTC11_00086850	chr9	+	485	2	FSM	ENSG00000230453.10	ENST00000426460.2	558	2	73	0	-58	0	multi-exon	FALSE	canonical	3	10	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGGTTAGTTATATG	NA	False	NA	NA	False	NA	NA	NA	33567044	33568885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33567315_33568670
WTC11_00086851	chr9	+	1134	1	FSM	ENSG00000231991.4	ENST00000435128.2	1020	1	-53	-61	-53	61	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAACATACAAAAGTTTAG	33624199	True	NA	NA	False	NA	NA	NA	33624220	33625354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33624200_33625400
WTC11_00086852	chr9	+	3891	3	FSM	ENSG00000281128.2	ENST00000667245.1	3941	3	0	50	0	-50	multi-exon	FALSE	canonical	3	4	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGCCTGTCAGAATGG	33676773	True	NA	NA	False	NA	NA	NA	33676784	33687940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33677510_33678089_33681074_33687758
WTC11_00086853	chr9	+	804	5	FSM	ENSG00000010438.17	ENST00000361005.10	804	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.12132034355964	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTCTGTGCCGGCTC	33750601	True	NA	16	True	AATAAA	-16	NA	33750678	33799231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33750728_33796642_33796803_33797828_33798083_33798485_33798623_33799027
WTC11_00086854	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_4	31.2999600638723	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	33816739	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
WTC11_00086855	chr9	+	2658	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	-80	-825	-40	0	multi-exon	FALSE	canonical	2	18	junction_2	108.8154400809	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	NA	False	NA	9	True	AATAAA	-14	NA	34178964	34252523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
WTC11_00086857	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	37.9286611065212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	34173629	True	NA	9	True	AATAAA	-14	NA	34179042	34252523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
WTC11_00086858	chr9	+	1318	1	FSM	ENSG00000229207.1	ENST00000419794.1	1249	1	-246	177	-246	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACGGCAACTCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	34318160	34319478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34318200_34319500
WTC11_00086859	chr9	+	968	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	54	junction_1	13.0979218029257	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327641	True	NA	35	True	AATAAA	-28	NA	34329497	34343711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
WTC11_00086860	chr9	+	573	2	FSM	ENSG00000213930.12	ENST00000468099.2	551	2	-22	0	22	0	multi-exon	FALSE	canonical	3	19	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTGACAACGACTTCC	34643582	True	NA	NA	False	NA	NA	NA	34646610	34647517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647120
WTC11_00086861	chr9	+	862	8	FSM	ENSG00000213930.12	ENST00000473506.6	838	8	-24	0	-19	0	multi-exon	FALSE	canonical	3	12	junction_2	99.5846476160674	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCTCCCAAGTAGGAT	34643585	True	NA	NA	False	NA	NA	NA	34646613	34648894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647540_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761
WTC11_00086862	chr9	+	1258	9	FSM	ENSG00000213930.12	ENST00000450095.6	1280	9	22	0	22	0	multi-exon	FALSE	canonical	3	13	junction_2	96.1193919040274	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGTGTGAACCTTC	34643582	True	NA	29	True	AATAAA	-37	NA	34646610	34650598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
WTC11_00086867	chr9	+	935	7	FSM	ENSG00000213930.12	ENST00000473529.5	913	7	-22	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	108.840862424612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACTGCTGCTGCCCCGT	34643607	True	NA	NA	False	NA	NA	NA	34646635	34648828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647491_34647706_34647831_34647962_34648091_34648172_34648333_34648457_34648761
WTC11_00086868	chr9	+	1767	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	-11	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	23.5034040087814	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	34643635	True	NA	NA	False	GGGGCT	-7	NA	34646663	34651035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
WTC11_00086873	chr9	+	2577	7	FSM	ENSG00000213930.12	ENST00000555020.5	2566	7	-11	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	24.3926218353009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATGAA	34643635	True	NA	NA	False	NA	NA	NA	34646663	34650282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647962_34648114_34648172_34648333_34648895_34648997
WTC11_00086874	chr9	+	1729	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	-17	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	22.2948699141707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	34643635	True	NA	-20	True	NA	NA	NA	34646663	34650549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
WTC11_00086879	chr9	+	858	2	FSM	ENSG00000213930.12	ENST00000488412.2	858	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATACTCTAATATCAGA	34648911	False	NA	14	True	AATAAA	-22	NA	34648921	34650583	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34649565_34650368
WTC11_00086880	chr9	+	1720	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	2	0	-2	multi-exon	TRUE	canonical	2	9	junction_1	6.75102872819313	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTATCCAATGCTGCT	34651960	True	NA	27	True	AATAAA	-35	NA	34652184	34661900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
WTC11_00086881	chr9	+	1516	12	FSM	ENSG00000137070.19	ENST00000557298.5	1505	12	-11	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	10.6724330143731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGGTGTGAATAAAGAGA	34653882	True	NA	-23	True	NA	NA	NA	34653934	34661850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
WTC11_00086882	chr9	+	1728	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.16836716989523	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	34653882	True	NA	19	True	AATAAA	-27	NA	34653934	34661892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
WTC11_00086887	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	22.3059533657621	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	34987242	True	NA	18	True	AATAAA	-18	NA	34989693	34998431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
WTC11_00086890	chr9	+	3073	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	89.5408038581046	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	34989766	True	NA	NA	False	NA	NA	NA	34990260	34998900	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
WTC11_00086893	chr9	+	1751	1	FSM	ENSG00000279489.1	ENST00000623595.1	1751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	NA	False	NA	7	True	AATAAA	-17	NA	35001912	35003663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35001900_35003700
WTC11_00086894	chr9	+	6303	39	FSM	ENSG00000198722.15	ENST00000378495.7	6303	39	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_23	27.5541396058429	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	35158673	False	NA	15	True	AATAAA	-17	NA	35162061	35405338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389845_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
WTC11_00086895	chr9	+	6081	39	NNC	ENSG00000198722.15	novel	6303	39	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_23	35.9263732323318	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	35162267	False	NA	15	True	AATAAA	-17	NA	35162280	35405338	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389848_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
WTC11_00086896	chr9	+	5218	12	FSM	ENSG00000198853.12	ENST00000361226.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	5.9153812672718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	35489416	True	NA	19	True	AATAAA	-21	NA	35490110	35561895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35490173_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
WTC11_00086897	chr9	+	2530	10	FSM	ENSG00000107140.16	ENST00000336395.6	2530	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	6.49786289653931	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTCAGCCCGTGCGCCC	35604835	True	NA	34	True	AATAAA	-30	NA	35605261	35610033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607326_35607410_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
WTC11_00086900	chr9	+	1177	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	75	junction_5	43.4649283906002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	35656553	True	NA	NA	False	AATAAA	-16	NA	35658285	35661499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
WTC11_00086901	chr9	+	1283	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	-19	0	-17	0	multi-exon	FALSE	canonical	3	147	junction_4	17.6405073623181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	35656540	True	NA	NA	False	AATAAA	-28	NA	35658272	35661511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
WTC11_00086903	chr9	+	1165	6	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	46	3	intron_retention	FALSE	canonical	2	4	junction_2	83.6746078568642	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGATGGAGTGCTCCTG	35656630	True	NA	8	True	ACTAAA	-13	NA	35658362	35661180	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35658486_35658575_35658728_35659939_35660243_35660400_35660462_35660556_35660648_35660745
WTC11_00086904	chr9	+	839	5	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	51	0	intron_retention	FALSE	canonical	3	11	junction_4	75.9485845819394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTCCTGTGTGTTT	35656635	True	NA	15	True	ACTAAA	-20	NA	35658367	35661187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660770
WTC11_00086905	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	28.577744837548	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	35729792	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
WTC11_00086906	chr9	+	9097	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	-2069	0	2069	multi-exon	FALSE	canonical	3	47	junction_3	6.30352084156148	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTGAATCAGAAACGCTG	35747625	True	NA	107	True	NA	NA	NA	35749286	35760654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
WTC11_00086907	chr9	+	1475	2	FSM	ENSG00000227388.3	ENST00000658963.1	1534	2	0	59	0	32	multi-exon	FALSE	canonical	3	23	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCATTCGGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	35785493	35790348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35786776_35790155
WTC11_00086908	chr9	+	1795	14	ISM	ENSG00000159899.16	ENST00000690267.1	3191	20	9062	268	988	0	3prime_fragment	FALSE	canonical	1	1	junction_1	11.1779580229186	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGTAAACCCCCATTC	35801129	False	NA	NA	False	NA	NA	NA	35801470	35809435	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_35801764_35802205_35802284_35802502_35802608_35802731_35802804_35805510_35805671_35805829_35805986_35806064_35806234_35806391_35806539_35807022_35807147_35807329_35807399_35808508_35808684_35808754_35808854_35809155_35809248_35809379
WTC11_00086909	chr9	+	14671	13	FSM	ENSG00000137103.20	ENST00000643932.2	14670	13	2	-3	2	0	multi-exon	FALSE	canonical	2	18	junction_3	11.3733973229931	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTGGAATTTTTT	35828755	True	NA	24	True	AATAAA	-37	NA	35829229	35865518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
WTC11_00086910	chr9	+	4426	21	FSM	ENSG00000122707.12	ENST00000377966.4	4412	21	-14	0	-14	0	multi-exon	TRUE	canonical	3	42	junction_16	58.2756166848537	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCTTCTAAGCAATGT	36033506	True	NA	8	True	AATAAA	-20	NA	36036898	36124455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956_36110080_36112304_36112477_36116984_36117178_36118756_36118968_36120662_36120737_36121532_36121689_36122823
WTC11_00086911	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	52.1989882564787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	36033547	True	NA	18	True	ATTAAA	-27	NA	36036939	36086195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
WTC11_00086913	chr9	+	1020	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	48.5938203375697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTTCGCTACTGTA	36033512	True	NA	13	True	ATTAAA	-22	NA	36036904	36086190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
WTC11_00086915	chr9	+	1892	1	FSM	ENSG00000185972.6	ENST00000335119.4	1947	1	54	1	54	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTGTTGTTTCCTT	NA	False	NA	NA	False	AGTAAA	-39	NA	36169441	36171333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36169400_36171300
WTC11_00086916	chr9	+	1044	3	FSM	ENSG00000122705.17	ENST00000540080.5	989	3	-59	4	-59	0	multi-exon	FALSE	canonical	3	98	junction_1	778.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGAAGCTTCTTTA	36190784	False	NA	35	True	AATAAA	-17	NA	36190796	36212057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36191274_36204067_36204180_36211602
WTC11_00086917	chr9	+	1080	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	-2	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	75.8102070964062	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGCTTCTTTATTGA	36152098	True	NA	39	True	AATAAA	-21	NA	36190920	36212061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
WTC11_00086918	chr9	+	2673	18	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	96.5688523934874	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568289	True	NA	9	True	AATAAA	-16	NA	36572863	36677681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573199_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086920	chr9	+	2402	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	-2	0	-2	0	multi-exon	FALSE	canonical	3	91	junction_2	87.6815972710352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568285	True	NA	11	True	AATAAA	-18	NA	36572859	36677683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086921	chr9	+	2365	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	-2	0	-2	0	multi-exon	FALSE	canonical	3	39	junction_12	99.9229195117417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568285	True	NA	11	True	AATAAA	-18	NA	36572859	36677683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086922	chr9	+	2344	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	-2	0	-2	0	multi-exon	FALSE	canonical	3	33	junction_4	98.925792895483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568285	True	NA	11	True	AATAAA	-18	NA	36572859	36677683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086923	chr9	+	2411	16	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	127.091498098374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGGCTTCTCTTTTTTG	36568320	True	NA	8	True	AATAAA	-15	NA	36572894	36677680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573199_36581643_36581740_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086924	chr9	+	2210	16	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	121.83697668971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGGCTTCTCTTTTTTG	36568320	True	NA	8	True	AATAAA	-15	NA	36572894	36677680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36583626_36583713_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086925	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	74.8205234320343	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568320	True	NA	10	True	AATAAA	-17	NA	36572894	36677682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086926	chr9	+	2194	16	NIC	ENSG00000165304.8	novel	2400	17	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	111.516097492694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGGCTTCTCTTTTTTG	36568367	False	NA	8	True	AATAAA	-15	NA	36572941	36677680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086927	chr9	+	2591	18	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	116.294192031872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568369	False	NA	11	True	AATAAA	-18	NA	36572943	36677683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573199_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086928	chr9	+	4138	6	ISM	ENSG00000165304.8	ENST00000545008.5	2236	16	81453	0	24343	0	3prime_fragment	FALSE	canonical	3	290	junction_1	63.3359297713391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36654333	False	NA	9	True	AATAAA	-16	NA	36654349	36677681	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00086930	chr9	+	4408	2	FSM	ENSG00000281649.3	ENST00000662098.2	2219	2	39	-2228	11	3	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACAATCTTTTTTTTT	37074722	True	NA	NA	False	TTTAAA	-24	NA	37079890	37090931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080035_37086667
WTC11_00086931	chr9	+	4444	3	FSM	ENSG00000281649.3	ENST00000658888.2	4447	3	3	0	3	0	multi-exon	FALSE	canonical	2	11	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCCAAATTCAGATCAG	NA	False	NA	-45	True	NA	NA	NA	37079861	37090342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080537_37084198_37084293_37086667
WTC11_00086932	chr9	+	4907	2	FSM	ENSG00000281649.3	ENST00000660341.1	4958	2	51	0	11	0	multi-exon	FALSE	canonical	3	114	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGACAATCTTTTTT	37074722	True	NA	NA	False	TTTAAA	-21	NA	37079890	37090928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080537_37086667
WTC11_00086934	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	35.8780486509509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115043	True	NA	7	True	AATAAA	-16	NA	37120573	37358149	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
WTC11_00086935	chr9	+	2935	9	FSM	ENSG00000147905.18	ENST00000534928.5	2828	9	-107	0	-83	0	multi-exon	FALSE	canonical	3	10	junction_1	54.1335154964094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATGTGTTTATTATG	37114960	True	NA	4	True	AATAAA	-13	NA	37120490	37358146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37120895_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
WTC11_00086936	chr9	+	1140	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	128	junction_1	168.701474504522	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	37414920	True	NA	NA	False	NA	NA	NA	37422661	37429158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
WTC11_00086938	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	58.6662967554626	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	37414954	True	NA	14	True	ATTAAA	-14	NA	37422695	37436990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
WTC11_00086940	chr9	+	1893	4	FSM	ENSG00000137106.18	ENST00000480596.5	1893	4	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	12.9700509722291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCGTCTTGGCCTGTA	37428502	True	NA	11	True	ATTAAA	-11	NA	37428537	37436987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37429837_37430510_37430647_37432007_37432139_37436660
WTC11_00086941	chr9	+	1868	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	76	junction_3	9.82827763762879	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	37482425	True	NA	14	True	TATAAA	-23	NA	37485934	37503697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
WTC11_00086942	chr9	+	539	4	FSM	ENSG00000165275.10	ENST00000540616.5	523	4	-16	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_2	26.3986531642978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCACTAAGCCTGGAA	37751969	True	NA	NA	False	NA	NA	NA	37753800	37763757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37762542_37762686_37763628
WTC11_00086943	chr9	+	1749	8	ISM	ENSG00000165275.10	ENST00000297994.4	2293	9	-4	1743	-2	-793	5prime_fragment	FALSE	canonical	3	30	junction_4	9.50832073845356	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTCCCCTTCATCTAG	37751969	True	NA	NA	False	NA	NA	NA	37753800	37777229	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281
WTC11_00086944	chr9	+	1897	8	FSM	ENSG00000165275.10	ENST00000377754.6	1881	8	-16	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_2	19.7732038839621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTCTGATCATGCTC	37751969	True	NA	NA	False	CATAAA	-18	NA	37753800	37778681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
WTC11_00086945	chr9	+	2297	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	-4	0	-2	0	multi-exon	FALSE	canonical	3	30	junction_4	8.89873586527884	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	37751969	True	NA	8	True	ATTAAA	-17	NA	37753800	37778972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
WTC11_00086946	chr9	+	7907	7	FSM	ENSG00000122741.16	ENST00000377724.8	7906	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	78	junction_2	14.9155027478869	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGAACCTTCACCATA	37799019	True	NA	8	True	AATAAA	-16	NA	37800795	37867664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37801406_37819287_37819402_37842088_37842287_37854779_37854983_37857240_37857352_37860047_37860194_37861139
WTC11_00086948	chr9	+	769	1	FSM	ENSG00000213839.4	ENST00000436507.2	708	1	2	-63	2	63	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTACAGCCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	37885684	37886453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37885700_37886500
WTC11_00086949	chr9	+	3148	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	-37	-2527	-27	4	multi-exon	FALSE	canonical	3	5	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTCCATATTGTCCT	38385622	True	NA	26	True	AATAAA	-26	NA	38392674	38398665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38392808_38394476_38394566_38395739
WTC11_00086950	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	38385649	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38392808_38395739
WTC11_00086951	chr9	+	1955	2	FSM	ENSG00000204860.5	ENST00000665533.1	1993	2	38	0	38	0	multi-exon	FALSE	canonical	3	10	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAATATTATTAACT	38620541	True	NA	-18	True	CATAAA	-22	NA	38620772	38623536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38621023_38621831
WTC11_00086952	chr9	+	572	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	5	25475	-3	-4360	5prime_fragment	FALSE	canonical	3	28	junction_1	13.4246870437348	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	40990872	True	NA	NA	False	NA	NA	NA	40992264	41007547	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
WTC11_00086953	chr9	+	1523	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-3	-1071	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	11.0817668065862	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATTAACTGCTTACTG	40990872	True	NA	NA	False	AATAAA	-29	NA	40992264	41014133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
WTC11_00086954	chr9	+	2001	1	FSM	ENSG00000280077.1	ENST00000623489.1	1903	1	-92	-6	-92	6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	NA	False	NA	NA	False	AATAAA	-35	NA	41012138	41014139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41012100_41014100
WTC11_00086955	chr9	+	1746	8	ISM	ENSG00000283378.1	ENST00000636699.1	1728	9	-164	5433	-164	-5433	5prime_fragment	FALSE	canonical	3	20	junction_6	5.76760835376753	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAACAGTTGTATTCCCA	61330199	True	NA	NA	False	NA	NA	NA	61330552	61447597	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_61331053_61352013_61352125_61379874_61380069_61425701_61425850_61440604_61440809_61441462_61441648_61442872_61443017_61447337
WTC11_00086956	chr9	+	2245	2	FSM	ENSG00000226007.3	ENST00000446626.2	2245	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTGGTGGAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	62532363	62534722	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62532689_62532802
WTC11_00086957	chr9	+	1277	1	FSM	ENSG00000238245.2	ENST00000449815.2	1277	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATGTTTAGTCTGATTC	NA	False	NA	NA	False	AATGAA	-5	NA	62857207	62858484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62857200_62858500
WTC11_00086958	chr9	+	681	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	-14	0	-11	0	multi-exon	FALSE	canonical	3	20	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897356	62898904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897735_62897877_62897980_62898703
WTC11_00086959	chr9	+	2547	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	-11	5	0	-5	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCGGGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	62897437	62900099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897735_62897849
WTC11_00086960	chr9	+	1604	2	FSM	ENSG00000170161.7	ENST00000661415.1	1604	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACCTGGTGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	62897437	62899765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897980_62898703
WTC11_00086961	chr9	+	906	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	-12	0	5	0	multi-exon	FALSE	canonical	2	15	junction_1	526.087445202791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	65669510	True	NA	NA	False	AATAAA	-14	NA	65675862	65682026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
WTC11_00086962	chr9	+	1364	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	-17	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	174.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	65669505	True	NA	NA	False	AATAAA	-42	NA	65675857	65682577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573
WTC11_00086963	chr9	+	1457	16	FSM	ENSG00000147996.17	ENST00000377389.5	1483	16	26	0	5	0	multi-exon	FALSE	canonical	2	15	junction_1	575.693166732264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	65669510	True	NA	3	True	AATAAA	-19	NA	65675862	65733673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00086964	chr9	+	1648	14	FSM	ENSG00000147996.17	ENST00000476161.5	1648	14	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	561.43105400607	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGGTAAATTAAG	65669541	True	NA	NA	False	NA	NA	NA	65675893	65732393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801
WTC11_00086968	chr9	+	1238	14	FSM	ENSG00000147996.17	ENST00000429800.6	1234	14	-4	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	556.770144748118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	65669571	True	NA	3	True	AATAAA	-19	NA	65675923	65733673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00086969	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	591.079275612985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	65669571	True	NA	4	True	AATAAA	-20	NA	65675923	65733674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00086971	chr9	+	1666	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	-4	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	550.338597073267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	65669571	True	NA	NA	False	AATAAA	-16	NA	65675923	65734041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00086973	chr9	+	3326	6	FSM	ENSG00000147996.17	ENST00000485088.5	3326	6	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_5	449.041913411209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	65706432	65733992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00086974	chr9	+	2970	3	FSM	ENSG00000147996.17	ENST00000461932.5	2970	3	0	0	0	0	multi-exon	FALSE	canonical	3	1643	junction_1	37.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	65719203	False	NA	NA	False	ATTAAA	-15	NA	65719384	65733994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65720093_65731629_65731699_65731801
WTC11_00086976	chr9	+	1076	2	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTCCTCTGTGCAA	66269208	True	NA	NA	False	AATAAA	-14	NA	66270006	66285315	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_66270268_66284500
WTC11_00086977	chr9	+	315	4	ISM	ENSG00000274349.5	ENST00000621410.5	4016	5	36	12735	23	-43	5prime_fragment	FALSE	canonical	2	7	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGTCTTTAGAAGATGA	66900674	True	NA	NA	False	ACTAAA	-37	NA	66900760	66908691	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_66900837_66903517_66903577_66908237_66908365_66908638
WTC11_00086978	chr9	+	603	3	ISM	ENSG00000276386.1	ENST00000617175.1	3861	24	-335	182999	-335	-182999	5prime_fragment	FALSE	canonical	3	14	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCACTGCTGTCGCCACCC	67059045	True	NA	NA	False	AATAAA	-39	NA	67059224	67110469	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_67059644_67082691_67082803_67110396
WTC11_00086979	chr9	+	346	1	FSM	ENSG00000275493.2	ENST00000612308.2	342	1	131	-135	131	135	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGGCCGACCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	67726044	67726390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_67726000_67726400
WTC11_00086981	chr9	+	1381	10	FSM	ENSG00000196873.16	ENST00000611426.4	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	321.054089516178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGTTCCTAAAACATC	NA	False	NA	NA	False	ATTAAA	-22	NA	68241912	68269435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933
WTC11_00086982	chr9	+	1582	13	FSM	ENSG00000196873.16	ENST00000618217.4	1611	13	29	0	5	0	multi-exon	FALSE	canonical	3	49	junction_8	460.755508799286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	68241917	68300011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00086983	chr9	+	1678	14	FSM	ENSG00000196873.16	ENST00000377342.9	1665	14	-13	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	428.032861095401	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	68241912	68300015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00086984	chr9	+	1747	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	-11	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_2	233.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	68241944	68249031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612
WTC11_00086988	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	408.430301550325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	NA	False	NA	NA	False	AATAAA	-39	NA	68241982	68300035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00086991	chr9	+	2416	14	FSM	ENSG00000107242.20	ENST00000541509.5	2664	14	248	0	248	0	multi-exon	FALSE	canonical	0	0	junction_1	3.26175616109449	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGGTGGTACATCGAT	68705547	True	NA	1	True	AATAAA	-14	NA	68705661	69009174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68705763_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_69008446
WTC11_00086992	chr9	+	5555	1	FSM	ENSG00000187866.10	ENST00000394264.7	5502	1	-30	-23	-30	23	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATGCATTTAATCTAT	68777168	True	NA	NA	False	AATAAA	-45	NA	68780034	68785589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68780000_68785600
WTC11_00086993	chr9	+	2650	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	30	junction_2	210.492016211753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	69031576	True	NA	-38	True	AATAAA	-36	NA	69035732	69074850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
WTC11_00086994	chr9	+	6994	5	FSM	ENSG00000165060.15	ENST00000484259.3	6978	5	-19	3	-18	-3	multi-exon	FALSE	canonical	3	474	junction_4	15.4171171105366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTCCAAGAGTGTTAGCA	69031576	True	NA	0	True	AATAAA	-14	NA	69035732	69079073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065036_69072611
WTC11_00086996	chr9	+	6121	25	FSM	ENSG00000285130.2	ENST00000645088.1	6106	25	-15	0	-12	0	multi-exon	TRUE	canonical	1	2	junction_4	147.450550797735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAGTGCTGCACAAAAG	69031578	True	NA	-96	True	NA	NA	NA	69035734	69255094	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69251034_69251365_69252814
WTC11_00086999	chr9	+	5405	24	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	-252	223	intron_retention	FALSE	canonical	0	0	junction_1	96.3922751024837	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTTCTATTTCCTATT	69120918	False	NA	NA	False	NA	NA	NA	69121011	69255431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
WTC11_00087007	chr9	+	5677	21	FSM	ENSG00000119139.21	ENST00000649943.1	5672	21	-5	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	121.732452534236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTGCAATCCGTAAT	69174011	True	NA	-5	True	AATAAA	-5	NA	69174276	69255185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69251034_69251365_69252814
WTC11_00087008	chr9	+	5349	20	FSM	ENSG00000119139.21	ENST00000649114.1	5344	20	-5	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	120.325366842645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCAATCCGTAATTT	69174011	True	NA	-3	True	AATAAA	-7	NA	69174276	69255187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814
WTC11_00087009	chr9	+	4055	21	FSM	ENSG00000119139.21	ENST00000348208.9	4055	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.438048795181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	69174011	True	NA	11	True	AATAAA	-21	NA	69174276	69255201	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
WTC11_00087010	chr9	+	4503	23	FSM	ENSG00000119139.21	ENST00000377245.9	4503	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	94.0891633566641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTGGATTTGTATG	69174011	True	NA	18	True	AATAAA	-28	NA	69174276	69255208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
WTC11_00087011	chr9	+	3282	3	FSM	ENSG00000119139.21	ENST00000650353.1	3282	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATACATTGCAATCC	69247604	False	NA	-10	True	NA	NA	NA	69247638	69255180	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69248225_69251034_69251365_69252814
WTC11_00087012	chr9	+	5870	11	FSM	ENSG00000135063.20	ENST00000303068.14	2559	11	-3313	2	-2665	0	multi-exon	FALSE	canonical	3	62	junction_6	9.70360757656656	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCTTGATGTGTAAT	NA	False	NA	10	True	AATAAA	-17	NA	69321901	69392454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69325724_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
WTC11_00087014	chr9	+	4045	7	FSM	ENSG00000135063.20	ENST00000645516.1	4045	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	11.6428327977153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGCTTGATGTGTAATA	69375767	True	NA	11	True	AATAAA	-18	NA	69375781	69392455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69388451_69391600
WTC11_00087016	chr9	+	739	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	-189	0	-46	0	multi-exon	FALSE	canonical	3	40	junction_2	54.7905101272109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	69818816	True	NA	-19	True	NA	NA	NA	69820770	69858158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
WTC11_00087017	chr9	+	781	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	-56	-28	-46	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6633634219397	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818816	True	NA	4	True	AATAAA	-17	NA	69820770	69906227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
WTC11_00087018	chr9	+	852	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	40	junction_2	55.3642483919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818854	True	NA	4	True	AATAAA	-17	NA	69820808	69906227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
WTC11_00087019	chr9	+	813	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	-19	0	-8	0	multi-exon	FALSE	canonical	1	4	junction_3	72.7780186594826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818854	True	NA	4	True	AATAAA	-17	NA	69820808	69906227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
WTC11_00087020	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	69818965	True	NA	2	True	AATAAA	-15	NA	69820919	69858179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69856554_69856674_69857908
WTC11_00087021	chr9	+	3474	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	-123	0	-123	0	multi-exon	FALSE	canonical	3	36	junction_1	8.13204633009385	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	NA	False	NA	10	True	AATAAA	-18	NA	70043724	70226972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
WTC11_00087022	chr9	+	560	1	FSM	ENSG00000236801.1	ENST00000446071.1	474	1	-34	-52	-34	52	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTATGTTTTCAAAACTA	NA	False	NA	NA	False	AATAAA	-27	NA	70217160	70217720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70217200_70217700
WTC11_00087023	chr9	+	5955	24	NIC	ENSG00000198887.9	novel	5949	25	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	37.7934892023343	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	70254457	True	NA	28	True	AATAAA	-18	NA	70258926	70354873	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
WTC11_00087024	chr9	+	6000	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	-51	0	-51	0	multi-exon	FALSE	canonical	0	0	junction_11	39.5660488578557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	70254457	True	NA	28	True	AATAAA	-18	NA	70258926	70354873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
WTC11_00087025	chr9	+	1548	1	FSM	ENSG00000274421.1	ENST00000622201.1	1246	1	-359	57	-359	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCTGAGATCGCGCCACT	NA	False	NA	NA	False	NA	NA	NA	70310515	70312063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70310500_70312100
WTC11_00087028	chr9	+	227	1	FSM	ENSG00000229814.1	ENST00000437667.1	333	1	159	-53	159	53	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGACCCTCTGAGTTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	71589759	71589986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71589800_71590000
WTC11_00087029	chr9	+	1369	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	-162	-305	-162	0	multi-exon	FALSE	canonical	3	25	junction_1	40.5	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71911324	False	NA	9	True	AATAAA	-16	NA	71911347	71973457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71911837_71971504_71971619_71972691
WTC11_00087030	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.1980390271856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71911554	False	NA	9	True	AATAAA	-16	NA	71911638	71973457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
WTC11_00087032	chr9	+	1358	3	NNC	ENSG00000155621.15	novel	902	3	NA	NA	52531	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	37	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71964141	True	NA	9	True	AATAAA	-16	NA	71964332	71973457	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_71964811_71971504_71971619_71972691
WTC11_00087033	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	4.66071048470319	2509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	73151549	True	NA	8	True	AATAAA	-18	NA	73151864	73170393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
WTC11_00087034	chr9	+	884	2	FSM	ENSG00000135046.14	ENST00000491192.1	1400	2	515	1	515	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGTCATTGACTCT	NA	False	NA	7	True	AATAAA	-17	NA	73168612	73170392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_73169155_73170050
WTC11_00087035	chr9	+	7073	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGAGTTTGACTTTT	NA	False	NA	20	True	AATAAA	-13	NA	74085730	74092803	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_74085700_74092800
WTC11_00087036	chr9	+	11911	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	-2331	1	-2331	-1	multi-exon	FALSE	canonical	1	3	junction_1	3.89998417217428	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGCCTAATGGTTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	74495003	74693176	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
WTC11_00087037	chr9	+	255	1	FSM	ENSG00000270954.1	ENST00000605848.1	301	1	5	41	5	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCACTGAATGGGTAGAA	NA	False	NA	NA	False	NA	NA	NA	74804477	74804732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_74804500_74804700
WTC11_00087038	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	34.5139084506987	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	75086817	True	NA	88	True	AGTAAA	-18	NA	75088513	75147265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
WTC11_00087039	chr9	+	2412	14	FSM	ENSG00000099139.14	ENST00000376767.7	2845	14	0	433	0	-433	multi-exon	FALSE	canonical	3	35	junction_10	7.43810754069758	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGCTTCCAGTGGG	75888819	True	NA	NA	False	NA	NA	NA	75890669	76175129	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985
WTC11_00087040	chr9	+	5791	21	FSM	ENSG00000099139.14	ENST00000376752.8	5756	21	-35	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	8.84872872225158	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGTTCATACCCAC	75888819	True	NA	12	True	ATTAAA	-21	NA	75890669	76195889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
WTC11_00087041	chr9	+	1030	1	FSM	ENSG00000234618.1	ENST00000418207.1	888	1	-66	-76	-66	76	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTATTTGTTTTTACC	76398614	False	NA	NA	False	AATAAA	-22	NA	76398632	76399662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_76398600_76399700
WTC11_00087042	chr9	+	5471	3	FSM	ENSG00000187210.14	ENST00000444201.6	5476	3	5	0	5	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCTTGTCTGCAGAAAT	76457046	True	NA	10	True	ATTAAA	-19	NA	76459156	76507414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_76459306_76500915_76501062_76502238
WTC11_00087043	chr9	+	5570	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	39	junction_2	34.0978982734518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	76457067	True	NA	12	True	ATTAAA	-21	NA	76459177	76507416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
WTC11_00087044	chr9	+	12374	69	FSM	ENSG00000197969.14	ENST00000645632.1	10086	69	-103	-2185	-12	0	multi-exon	TRUE	canonical	3	17	junction_22	18.2994778888213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGAATTTGTTGTTC	77177397	True	NA	6	True	AATAAA	-16	NA	77177432	77385191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184_77221357_77225925_77225989_77226465_77226599_77227390_77227486_77228121_77228265_77238001_77238192_77238271_77238387_77247258_77247396_77250096_77250230_77252234_77252353_77260085_77260225_77273279_77273365_77275497_77275653_77276064_77276222_77280158_77280239_77281866_77281927_77282120_77282275_77283354_77283472_77283546_77283651_77293340_77293509_77295541_77295847_77302914_77303063_77307944_77308099_77313991_77314120_77314494_77314665_77315252_77315471_77316173_77316407_77317605_77317699_77318234_77318592_77319571_77319674_77321168_77321328_77321490_77321747_77323066_77323228_77332009_77332114_77337254_77337538_77339515_77339912_77340177_77340283_77340403_77340551_77344152_77344282_77345008_77345143_77351316_77351447_77353408_77353642_77356713_77356868_77357691_77357839_77358356_77358439_77359332_77359403_77360535_77360642_77365459_77365574_77366726_77366873_77368054_77368137_77369298_77369413_77370256_77370333_77370414_77370579_77370889_77370936_77371025_77371150_77381975_77382088_77382278
WTC11_00087047	chr9	+	15319	72	FSM	ENSG00000197969.14	ENST00000360280.8	15227	72	-92	0	-3	0	multi-exon	FALSE	canonical	3	17	junction_22	18.2292592194021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTTCTGTTTTTAGT	77177383	True	NA	10	True	AATAAA	-15	NA	77177441	77421537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184_77221357_77225925_77225989_77226465_77226599_77227390_77227486_77228121_77228265_77238001_77238192_77238271_77238387_77247258_77247396_77250096_77250230_77252234_77252353_77260085_77260225_77273279_77273365_77275497_77275653_77276064_77276222_77280158_77280239_77281866_77281927_77282120_77282275_77283354_77283472_77283546_77283651_77293340_77293509_77295541_77295847_77302914_77303063_77307944_77308099_77313991_77314120_77314494_77314665_77315252_77315471_77316173_77316407_77317605_77317699_77318234_77318592_77319571_77319674_77321168_77321328_77321490_77321747_77323066_77323228_77332009_77332114_77337254_77337538_77339515_77339912_77340177_77340283_77340403_77340551_77344152_77344282_77345008_77345143_77351316_77351447_77353408_77353642_77356713_77356868_77357691_77357839_77358356_77358439_77359332_77359403_77360535_77360642_77365459_77365574_77366726_77366873_77368054_77368137_77369298_77369413_77370256_77370333_77370414_77370579_77370889_77370936_77371025_77371150_77381975_77382088_77403235_77403322_77405863_77405988_77407532_77407608_77415955
WTC11_00087051	chr9	+	239	1	FSM	ENSG00000234819.1	ENST00000449661.1	238	1	163	-164	163	164	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTAAGATGTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	78219282	78219521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78219300_78219500
WTC11_00087052	chr9	+	2697	16	FSM	ENSG00000148019.14	ENST00000645398.1	2684	16	-13	0	-10	0	multi-exon	FALSE	canonical	3	92	junction_15	48.6641095218597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTCATATGACTAAATC	78231268	True	NA	-69	True	AAGAAA	-19	NA	78236051	78266994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
WTC11_00087053	chr9	+	11233	17	FSM	ENSG00000148019.14	ENST00000643273.2	11233	17	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_15	51.5060296834264	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	78231291	True	NA	NA	False	AATAAA	-20	NA	78236074	78279690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
WTC11_00087054	chr9	+	11185	16	FSM	ENSG00000148019.14	ENST00000424347.6	11198	16	13	0	0	0	multi-exon	FALSE	canonical	3	92	junction_14	47.9258686816305	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	78231291	True	NA	NA	False	AATAAA	-20	NA	78236074	78279690	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
WTC11_00087055	chr9	+	2989	8	FSM	ENSG00000148019.14	ENST00000536374.1	2975	8	-14	0	2	0	multi-exon	TRUE	canonical	2	16	junction_1	71.497109974417	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCGGGCACGGTGGCT	78231283	True	NA	NA	False	ATTAAA	-10	NA	78236066	78250453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761
WTC11_00087057	chr9	+	10222	16	NIC	ENSG00000148019.14	novel	3159	17	NA	NA	0	-961	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	58.9818804568167	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTGCATTTGCAAAT	78231296	True	NA	NA	False	NA	NA	NA	78236079	78278729	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
WTC11_00087059	chr9	+	2633	15	FSM	ENSG00000148019.14	ENST00000277082.9	2542	15	-91	0	0	0	multi-exon	FALSE	canonical	3	92	junction_14	43.4802911016671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGCATATGGTGTCTTA	78231357	True	NA	4	True	AATAAA	-17	NA	78236140	78267067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
WTC11_00087061	chr9	+	2626	16	FSM	ENSG00000148019.14	ENST00000376597.9	2626	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	59.5456874079802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	78231423	True	NA	12	True	AATAAA	-25	NA	78236206	78267075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
WTC11_00087064	chr9	+	2590	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	-540	-639	-522	0	multi-exon	TRUE	canonical	3	174	junction_7	449.466259431503	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	78296589	False	NA	72	True	ATTAAA	-17	NA	78296602	78330093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
WTC11_00087065	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_7	128.864209053561	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	78266249	True	NA	72	True	ATTAAA	-17	NA	78297124	78330093	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
WTC11_00087066	chr9	+	1225	6	ISM	ENSG00000106829.20	ENST00000435650.5	873	10	-636	77353	-9	0	5prime_fragment	FALSE	canonical	3	138	junction_5	47.630242493609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGCCTTTCCATTTT	79567240	True	NA	NA	False	NA	NA	NA	79571955	79627448	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373
WTC11_00087067	chr9	+	4907	20	FSM	ENSG00000106829.20	ENST00000376552.8	4886	20	-21	0	3	0	multi-exon	FALSE	canonical	3	99	junction_6	43.5407282191102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGGGTTTTTTTCAC	79567228	True	NA	NA	False	AGTAAA	-22	NA	79571943	79726882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
WTC11_00087068	chr9	+	1334	6	NIC	ENSG00000106829.20	novel	873	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	80.8974659677298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAACTCTCTTGGAAT	79567261	True	NA	NA	False	ATTAAA	-38	NA	79571976	79652794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79652589
WTC11_00087077	chr9	+	3507	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	-87	0	-87	0	multi-exon	FALSE	canonical	3	41	junction_1	111.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977487	True	NA	110	True	ATTAAA	-21	NA	83980710	84004074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_83981005_83999708_83999798_84000950
WTC11_00087078	chr9	+	3451	4	NNC	ENSG00000178966.17	novel	3300	3	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	113.373522286094	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977506	True	NA	110	True	ATTAAA	-21	NA	83980729	84004074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_83980892_83988328_83988405_83999708_83999798_84000950
WTC11_00087079	chr9	+	3394	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	-94	0	-87	0	multi-exon	TRUE	canonical	3	171	junction_1	46.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977487	True	NA	110	True	ATTAAA	-21	NA	83980710	84004074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_83980892_83999708_83999798_84000950
WTC11_00087081	chr9	+	7202	23	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	-119	669	combination_of_known_junctions	TRUE	canonical	3	64	junction_1	48.5842754209818	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAAGTTTTATAAGTT	NA	False	NA	NA	False	AATAGA	-31	NA	85941026	86026131	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
WTC11_00087087	chr9	+	5912	26	FSM	ENSG00000196730.13	ENST00000408954.8	5912	26	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	34.3452121845243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGATCTTTAATTC	87493961	True	NA	19	True	AATAAA	-19	NA	87497866	87708634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
WTC11_00087089	chr9	+	5772	26	FSM	ENSG00000196730.13	ENST00000622514.4	5772	26	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	99.0735161382698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	87498523	False	NA	18	True	AATAAA	-18	NA	87498534	87708633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87498637_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
WTC11_00087094	chr9	+	696	4	FSM	ENSG00000196730.13	ENST00000494010.1	696	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	242.908762021189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGGACTCTTATTTC	87649944	True	NA	NA	False	AATAAA	-15	NA	87649989	87668047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87650119_87651526_87651725_87658028_87658128_87667777
WTC11_00087097	chr9	+	1882	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	247	0	63	0	multi-exon	FALSE	canonical	3	68	junction_1	45.4263251915468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	NA	False	NA	7	True	AATAAA	-24	NA	87725797	87731466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
WTC11_00087098	chr9	+	1651	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	3	0	0	multi-exon	FALSE	canonical	3	64	junction_1	46.7756259570459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	87723395	True	NA	7	True	AATAAA	-24	NA	87726118	87731466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
WTC11_00087102	chr9	+	582	1	FSM	ENSG00000217716.3	ENST00000439253.1	494	1	-26	-62	-26	62	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAACAAACCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	88016273	88016855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88016300_88016900
WTC11_00087111	chr9	+	3339	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	-19	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	87.3012027408558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308888	True	NA	15	True	AATAAA	-15	NA	89318499	89359642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00087112	chr9	+	3472	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	9	0	-8	multi-exon	FALSE	canonical	3	131	junction_6	64.5822815774575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGATTTTAGGCTTC	89308888	True	NA	27	True	AATAAA	-27	NA	89318499	89359654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00087113	chr9	+	3333	17	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	65.5186042281122	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTTCAGACTCTGGT	89308900	True	NA	14	True	AATAAA	-14	NA	89318511	89359641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00087114	chr9	+	3594	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	-18	8	-18	-8	multi-exon	FALSE	canonical	2	6	junction_1	100.438083383496	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGATTTTAGGCTTC	89318755	True	NA	27	True	AATAAA	-27	NA	89318832	89359654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00087121	chr9	+	1189	4	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	40.8765077873452	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTGCATATGGATTT	90415059	False	NA	17	True	AATAAA	-28	NA	90415077	90429455	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_90415122_90426028_90426133_90427768_90427834_90428479
WTC11_00087122	chr9	+	3091	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	20	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAATCCAGTTGCATATG	90412947	True	NA	12	True	AATAAA	-23	NA	90413066	90429450	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_90415122_90427768_90427834_90428479
WTC11_00087124	chr9	+	3662	5	ISM	ENSG00000165025.15	ENST00000375746.1	4990	14	50097	0	50097	0	3prime_fragment	FALSE	canonical	3	16	junction_2	3.8405728739343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	NA	False	NA	14	True	AATAAA	-14	NA	90877584	90898549	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
WTC11_00087133	chr9	+	6679	22	FSM	ENSG00000165238.17	ENST00000411624.5	6679	22	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	9.61881187829939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTGAAACAACATCTTT	93234910	True	NA	14	True	AATAAA	-17	NA	93234922	93319208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519
WTC11_00087136	chr9	+	2258	3	FSM	ENSG00000165238.17	ENST00000467401.1	2258	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACTTTGGTTTTTC	93306626	False	NA	12	True	AATAAA	-15	NA	93306636	93320564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93308585_93317519_93317632_93320366
WTC11_00087137	chr9	+	559	2	FSM	ENSG00000165238.17	ENST00000460335.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	NA	False	NA	25	True	AGTAAA	-17	NA	93308500	93309195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93308585_93308720
WTC11_00087141	chr9	+	1388	2	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	93349169	False	NA	27	True	AATAAA	-18	NA	93349181	93353304	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93350155_93352889
WTC11_00087142	chr9	+	810	2	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	93349737	False	NA	25	True	AATAAA	-16	NA	93349754	93353302	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93350155_93352892
WTC11_00087144	chr9	+	4377	17	NIC	ENSG00000048828.17	novel	5160	18	NA	NA	-54	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_14	24.9085828581234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93452312	False	NA	22	True	AATAAA	-24	NA	93452329	93566112	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93561108_93561251_93562207_93562305_93564228
WTC11_00087149	chr9	+	4503	10	FSM	ENSG00000158079.16	ENST00000375360.7	4517	10	0	14	0	0	multi-exon	FALSE	canonical	3	21	junction_7	5.9087714668037	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAACCCATAATCCTAG	94030344	True	NA	-6	True	AATAAA	-8	NA	94030793	94109842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94031128_94064733_94064822_94085250_94085423_94087830_94087912_94088144_94088264_94095316_94095455_94097320_94098580_94101565_94101752_94104274_94104386_94107827
WTC11_00087153	chr9	+	3260	11	NIC	ENSG00000148110.17	novel	3402	12	NA	NA	-78	-122	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	101.68992083781	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCTTTTTTTTA	94367722	True	NA	10	True	AATAAA	-20	NA	94374490	94460920	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_94374928_94415157_94415254_94429188_94429252_94438400_94438529_94440984_94441100_94444963_94445183_94446822_94446937_94451455_94451528_94453957_94454071_94458321_94458465_94459160
WTC11_00087154	chr9	+	3280	12	FSM	ENSG00000148110.17	ENST00000375344.8	3402	12	0	122	0	-122	multi-exon	FALSE	canonical	3	263	junction_6	43.5398554001327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCTTTTTTTTA	94367800	True	NA	10	True	AATAAA	-20	NA	94374568	94460920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94374928_94415157_94415254_94429188_94429252_94438400_94438529_94440984_94441100_94444963_94445183_94446822_94446937_94451455_94451528_94453957_94454071_94456239_94456338_94458321_94458465_94459160
WTC11_00087157	chr9	+	3976	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_1	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	94553785	True	NA	NA	False	AATAAA	-3	NA	94555080	94570916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94555346_94558968_94559153_94567389
WTC11_00087158	chr9	+	3150	17	FSM	ENSG00000148120.18	ENST00000375315.8	3130	17	-20	0	-20	0	multi-exon	TRUE	canonical	2	12	junction_9	12.6682427747498	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725160	True	NA	14	True	AATAAA	-23	NA	94726678	95087159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
WTC11_00087159	chr9	+	2820	15	FSM	ENSG00000148120.18	ENST00000297979.9	2820	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	13.0899556445204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725193	True	NA	14	True	AATAAA	-23	NA	94726711	95087159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
WTC11_00087160	chr9	+	1001	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	327	-7	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	12.5222025041746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATACGTGTTTGCTT	95004055	False	NA	7	True	AATAAA	-16	NA	95004243	95087152	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
WTC11_00087165	chr9	+	2210	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	-24	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	95872686	True	NA	NA	False	AAAAAG	-16	NA	95875683	95882677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95876085_95880868
WTC11_00087168	chr9	+	1974	1	FSM	ENSG00000224546.2	ENST00000432132.2	1850	1	-33	-91	-33	91	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCACCATCTCCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	96145973	96147947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96146000_96147900
WTC11_00087170	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_6	22.5352331848126	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	96448649	True	NA	4	True	AATAAA	-20	NA	96450168	96491336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
WTC11_00087171	chr9	+	1120	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	-158	339	-133	0	multi-exon	FALSE	canonical	2	17	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTTCTTTAT	96686871	False	NA	4	True	AATAAA	-16	NA	96686889	96773979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96687325_96720965_96721131_96773459
WTC11_00087174	chr9	+	2755	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-59	5018	multi-exon	TRUE	canonical	0	0	junction_1	213.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97213865	False	NA	0	True	NA	NA	NA	97214774	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97216492_97216706_97217381_97219583
WTC11_00087175	chr9	+	3182	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-59	5018	multi-exon	FALSE	canonical	3	156	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97213865	False	NA	0	True	NA	NA	NA	97214774	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217104
WTC11_00087176	chr9	+	750	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-35	5089	multi-exon	FALSE	canonical	3	906	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTGTTAATTTTTTTC	97214553	False	NA	71	True	NA	NA	NA	97214798	97220018	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97219583
WTC11_00087177	chr9	+	1268	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-49	5334	multi-exon	FALSE	canonical	3	156	junction_1	373	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGCATTTTATTAATAA	97213875	False	NA	NA	False	CATAAA	-23	NA	97214784	97220263	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217104_97217364_97219583
WTC11_00087178	chr9	+	705	2	Antisense	novelGene_ENSG00000203279.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	902	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97217008	False	NA	0	True	NA	NA	NA	97217022	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_97217364_97219583
WTC11_00087190	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	54.0986752764489	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	97970670	True	NA	12	True	AATAAA	-19	NA	97983340	98015943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
WTC11_00087193	chr9	+	2780	10	FSM	ENSG00000119514.7	ENST00000375011.4	2764	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	115	junction_5	30.9435966370994	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGATCTTTTTGTACTG	98805487	True	NA	16	True	ATTAAA	-19	NA	98807653	98850081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_98808070_98823255_98823426_98826751_98826942_98831771_98831958_98835248_98835367_98836971_98837149_98840001_98840134_98844095_98844210_98845976_98846124_98848951
WTC11_00087194	chr9	+	6492	9	FSM	ENSG00000106799.13	ENST00000374994.9	6492	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_7	27.4533695563951	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGACAATTTGTTGCC	99097973	True	NA	118	True	ATTAAA	-17	NA	99105112	99154192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99105303_99128854_99129101_99132508_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
WTC11_00087196	chr9	+	5933	9	FSM	ENSG00000106799.13	ENST00000552516.5	5933	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	121.715279956955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATTTTAAAATAAAGTG	99098010	True	NA	-3	True	AATAAA	-25	NA	99105149	99153658	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99105303_99128854_99129101_99132496_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
WTC11_00087199	chr9	+	673	2	FSM	ENSG00000106803.10	ENST00000481573.1	687	2	0	14	0	-14	multi-exon	FALSE	canonical	3	3235	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCTTTCTCATAAGC	99181644	True	NA	NA	False	TTTAAA	-7	NA	99222314	99223166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99222367_99222545
WTC11_00087200	chr9	+	6891	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	-6	0	-6	0	multi-exon	FALSE	canonical	3	40	junction_1	10.842094834863	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	99905523	True	NA	5	True	AATAAA	-18	NA	99906647	99974534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
WTC11_00087204	chr9	+	2369	4	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_3	12.657891697365	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCAAGAGTTTCAACCT	100351302	True	NA	NA	False	AATAAA	-38	NA	100353074	100393902	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_100353582_100353996_100354096_100390448_100390547_100392237
WTC11_00087207	chr9	+	2035	4	NIC	ENSG00000066697.15	novel	1880	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	122.893811434461	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	100427144	100451734	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_100427394_100429505_100429663_100441905_100442357_100450556
WTC11_00087211	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_9	38.2499899136596	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	100468916	True	NA	23	True	AATATA	-15	NA	100473148	100577636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
WTC11_00087212	chr9	+	3098	2	FSM	ENSG00000170681.7	ENST00000307584.6	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATTACAACATTTGATG	100578065	False	NA	NA	False	AATAAA	-17	NA	100578078	100588389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100578552_100585764
WTC11_00087214	chr9	+	3140	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	-6	0	-6	0	multi-exon	FALSE	canonical	2	8	junction_1	5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398192	True	NA	22	True	ATTAAA	-23	NA	101398866	101410660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101399190_101399925_101400011_101407928
WTC11_00087217	chr9	+	3936	20	NIC	ENSG00000155827.12	novel	3938	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	58.5655869759651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	101529354	True	NA	28	True	ATTAAA	-18	NA	101533908	101563344	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_101533969_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
WTC11_00087219	chr9	+	8524	25	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	0	2587	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	52.2269187456686	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATTGTGGTGGGCGAT	104090575	True	NA	108	True	NA	NA	NA	104094308	104144006	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
WTC11_00087220	chr9	+	5878	25	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	51.2618380636772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	104090596	True	NA	9	True	AATAAA	-14	NA	104094329	104141419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
WTC11_00087221	chr9	+	4270	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	-4	0	-4	0	multi-exon	TRUE	canonical	3	39	junction_1	53.3648344469985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	104093806	True	NA	9	True	ATTAAA	-16	NA	104094559	104139651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
WTC11_00087222	chr9	+	1723	5	ISM	ENSG00000136783.10	ENST00000374767.5	1636	6	3	0	3	0	intron_retention	FALSE	canonical	3	99	junction_3	11.5839328382031	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	104746611	True	NA	5	True	AATAAA	-14	NA	104747685	104760120	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084
WTC11_00087223	chr9	+	1646	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	81	junction_5	14.7512711316686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	104746598	True	NA	5	True	AATAAA	-14	NA	104747672	104760120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
WTC11_00087225	chr9	+	2433	16	FSM	ENSG00000070214.16	ENST00000374724.1	3088	16	0	655	0	-655	multi-exon	FALSE	canonical	0	0	junction_15	93.6581490789183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCTTCACATTTAATG	105238637	True	NA	NA	False	AATAAA	-36	NA	105244621	105438516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105438280
WTC11_00087226	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	24.3261176516106	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105238666	True	NA	7	True	AATAAA	-21	NA	105244650	105397346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
WTC11_00087236	chr9	+	1627	1	Genic_Genomic	ENSG00000148143.13	novel	NA	NA	NA	NA	2821	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCATCTGTTGTAAAT	107011997	False	NA	11	True	AATAAA	-21	NA	107012009	107013636	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_107012000_107013600
WTC11_00087237	chr9	+	609	1	FSM	ENSG00000225531.1	ENST00000422849.1	729	1	145	-25	145	25	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGATAAAGTTAAACATAA	NA	False	NA	NA	False	AAGAAA	-15	NA	107116973	107117582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_107117000_107117600
WTC11_00087239	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12.0287720913105	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	107249376	True	NA	12	True	TATAAA	-15	NA	107283278	107332189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
WTC11_00087243	chr9	+	7690	10	FSM	ENSG00000157654.19	ENST00000302798.7	4718	10	-369	-2603	-111	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4033293822793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	109780076	False	NA	14	True	ATTAAA	-28	NA	109780086	110172512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_110015953_110016040_110136126_110138540_110156318_110156498_110168398
WTC11_00087244	chr9	+	9574	7	FSM	ENSG00000157654.19	ENST00000314527.9	9578	7	0	4	0	-4	multi-exon	FALSE	canonical	3	8	junction_3	4.74926894959167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACCTCTGTGTGTCTGTG	109779710	True	NA	NA	False	AATAAA	-17	NA	109780197	109951472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_109942685
WTC11_00087246	chr9	+	6887	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	69	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	110044478	True	NA	14	True	ATTAAA	-28	NA	110048674	110172512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
WTC11_00087253	chr9	+	2325	4	FSM	ENSG00000059769.20	ENST00000313525.4	2280	4	-45	0	-45	0	multi-exon	FALSE	canonical	3	60	junction_1	28.1780056072107	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTTTGTTGATATGA	NA	False	NA	NA	False	AATAAA	-15	NA	111631288	111654345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_111631744_111647106_111647260_111649452_111649924_111653099
WTC11_00087254	chr9	+	2496	5	FSM	ENSG00000059769.20	ENST00000447096.1	2498	5	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_2	36.4623093070091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTGATATGACGTT	111629331	True	NA	NA	False	AATAAA	-19	NA	111631359	111654349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452_111649924_111653099
WTC11_00087256	chr9	+	1197	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	178	junction_2	192	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	111654710	True	NA	15	True	AATAAA	-17	NA	111661605	111670226	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_111661716_111666814_111666947_111669271
WTC11_00087257	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_4	28.1044369272896	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	111894601	True	NA	9	True	AATAAA	-20	NA	111896813	111935369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
WTC11_00087258	chr9	+	605	6	FSM	ENSG00000148154.10	ENST00000490110.5	581	6	-24	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	107.792393052571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGGCTTGGTTCACG	111895218	False	NA	NA	False	NA	NA	NA	111897176	111926426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_111897314_111914604_111914747_111915758_111915837_111922848_111922952_111924776_111924879_111926383
WTC11_00087260	chr9	+	3211	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	-37	0	-9	0	multi-exon	FALSE	canonical	3	97	junction_8	11.1986606342009	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378931	True	NA	12	True	AATAAA	-18	NA	112380070	112472405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
WTC11_00087264	chr9	+	7724	9	FSM	ENSG00000148158.17	ENST00000374232.8	7700	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	37	junction_3	6.84539078504653	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTCATGTCCTCATT	112749877	True	NA	10	True	AATAAA	-23	NA	112750735	112874987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112751158_112804775_112804968_112817704_112817816_112830724_112830884_112836213_112836410_112838497_112838698_112850858_112850946_112864246_112864400_112868783
WTC11_00087265	chr9	+	927	2	NNC	ENSG00000148158.17	novel	7700	9	NA	NA	-34911	-61315	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCGCTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	112803673	112805210	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_112804166_112804775
WTC11_00087266	chr9	+	1745	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	-22	0	9	0	multi-exon	FALSE	canonical	3	20	junction_2	4.08248290463863	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	113150783	True	NA	18	True	ATTAAA	-44	NA	113150984	113164140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
WTC11_00087267	chr9	+	4780	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	563	junction_4	32.962099447699	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	113212795	True	NA	11	True	AATAAA	-22	NA	113221525	113264492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
WTC11_00087268	chr9	+	2918	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	-21	0	-5	0	multi-exon	FALSE	canonical	3	260	junction_1	28.3129175779387	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	113268472	True	NA	28	True	TATAAA	-38	NA	113275636	113292905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
WTC11_00087269	chr9	+	4025	14	FSM	ENSG00000136875.13	ENST00000374199.9	4020	14	-5	0	-5	0	multi-exon	FALSE	canonical	3	60	junction_1	72.3189025679943	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTATTAGTTCCCTTC	113268472	True	NA	5	True	TTTAAA	-1	NA	113275636	113294009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113275771_113276544_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
WTC11_00087270	chr9	+	2328	6	FSM	ENSG00000119411.11	ENST00000374183.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	11.1175536877498	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	113348693	True	NA	4	True	ATTAAA	-14	NA	113349540	113371222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258_113368384_113369615
WTC11_00087271	chr9	+	2210	5	FSM	ENSG00000119411.11	ENST00000462085.1	2213	5	3	0	3	0	multi-exon	FALSE	canonical	3	18	junction_4	42.1485468314152	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTCTTTGTTGATA	113348697	True	NA	15	True	ATTAAA	-25	NA	113349544	113371233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113369615
WTC11_00087273	chr9	+	1522	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	-20	1	-20	-1	multi-exon	FALSE	canonical	3	30	junction_1	10.8397416943394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTTGACCCTTTTTGT	113593193	True	NA	8	True	AATAAA	-17	NA	113594108	113597728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
WTC11_00087274	chr9	+	1156	12	FSM	ENSG00000157657.15	ENST00000374124.4	1156	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	5.53127845279137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGAGTGTGCCCCTTG	113876325	False	NA	NA	False	NA	NA	NA	113876349	114032724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114028732_114028973_114032647
WTC11_00087275	chr9	+	9341	15	NIC	ENSG00000157657.15	novel	9363	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	6.7570824521613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	113876325	False	NA	9	True	AATAAA	-13	NA	113876349	114056591	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_113998258_113998355_114001995_114002074_114002623_114002663_114007349_114007440_114008476_114008555_114016112_114016173_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
WTC11_00087276	chr9	+	6755	60	NIC	ENSG00000196739.15	novel	7813	61	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	32.0114440180126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAAGG	114154541	True	NA	NA	False	NA	NA	NA	114155549	114311528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_114156013_114162714_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205813_114206251_114206297_114209674_114209729_114210981_114211027_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231859_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
WTC11_00087277	chr9	+	7813	61	FSM	ENSG00000196739.15	ENST00000356083.8	7813	61	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	31.5093063853981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACGCCTGTGGTCCCGT	114154528	True	NA	26	True	AATAAA	-24	NA	114155536	114312511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114156013_114162714_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205813_114206251_114206297_114209674_114209729_114210981_114211027_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231867_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114269240_114269295_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
WTC11_00087280	chr9	+	2975	2	FSM	ENSG00000196739.15	ENST00000477421.2	3991	2	0	1016	0	-1016	multi-exon	FALSE	canonical	3	51	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGCCAGAAATGGAATC	NA	False	NA	NA	False	NA	NA	NA	114268806	114273214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114269295_114270727
WTC11_00087281	chr9	+	527	4	FSM	ENSG00000196739.15	ENST00000494780.1	514	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	80	junction_3	4.49691252107735	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCGGACCTCCGTCATC	114300337	False	NA	NA	False	NA	NA	NA	114300348	114301542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114300688_114301071_114301126_114301283_114301320_114301444
WTC11_00087282	chr9	+	1946	3	FSM	ENSG00000196739.15	ENST00000468565.1	1946	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	114307031	114311528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114307779_114309259_114309479_114310548
WTC11_00087284	chr9	+	1580	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	-17	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_2	20.5	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	114561374	True	NA	19	True	AATACA	-32	NA	114587751	114598879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114587921_114592551_114592653_114597569
WTC11_00087286	chr9	+	4511	9	FSM	ENSG00000157693.15	ENST00000288502.9	4490	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	51	junction_6	6.75347132962005	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTCGCATATTGT	114611003	True	NA	5	True	AATAAA	-16	NA	114611269	114646422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114611565_114617117_114617302_114624349_114624460_114626898_114627007_114628100_114628251_114633767_114633879_114636989_114637071_114638543_114638727_114643133
WTC11_00087287	chr9	+	848	5	FSM	ENSG00000157693.15	ENST00000471206.1	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	26.9849495089392	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTTGAAAGACACCAGA	114611355	True	NA	NA	False	NA	NA	NA	114611457	114628225	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114611565_114617117_114617302_114624135_114624460_114626898_114627007_114628100
WTC11_00087288	chr9	+	3442	2	Antisense	novelGene_ENSG00000228714.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	115471312	True	NA	17	True	AATAAA	-16	NA	115473506	115478878	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_115473781_115475710
WTC11_00087289	chr9	+	3708	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	7	0	7	0	multi-exon	FALSE	canonical	3	39	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	116686121	True	NA	3	True	ATTAAA	-15	NA	116687311	116701299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_116687382_116697661
WTC11_00087290	chr9	+	3706	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	-18	0	7	0	multi-exon	FALSE	canonical	3	51	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	116686121	True	NA	4	True	ATTAAA	-16	NA	116687311	116701300	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_116687382_116697664
WTC11_00087293	chr9	+	291	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCGGCCTGACGAGGAG	118489367	False	NA	NA	False	AAAAAG	-43	NA	118489416	118489707	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118489400_118489700
WTC11_00087295	chr9	+	5984	3	NIC	ENSG00000226752.10	novel	1970	4	NA	NA	0	-12	intron_retention	FALSE	canonical	2	3	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGTCTGGACACGAT	120842180	True	NA	NA	False	AATAAA	-18	NA	120843099	120854373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_120845888_120847293_120847354_120851237
WTC11_00087298	chr9	+	7719	44	FSM	ENSG00000119397.19	ENST00000373855.7	7719	44	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	15.0629829689248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	121074435	True	NA	13	True	AATAAA	-14	NA	121074954	121177610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
WTC11_00087299	chr9	+	3043	17	FSM	ENSG00000119397.19	ENST00000373851.6	3132	17	0	89	0	-89	multi-exon	FALSE	canonical	3	6	junction_3	10.172727018848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTGGATTATATGG	NA	False	NA	NA	False	NA	NA	NA	121112458	121150565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121112579_121113501_121113725_121115090_121115201_121118345_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169
WTC11_00087303	chr9	+	2607	19	FSM	ENSG00000148180.21	ENST00000373808.8	2664	19	57	0	-45	0	multi-exon	FALSE	canonical	3	5	junction_2	96.43946799757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTATCCAAAAATAGCC	121266705	True	NA	23	True	NA	NA	NA	121268116	121332738	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121268220_121281469_121281563_121300055_121300127_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
WTC11_00087304	chr9	+	2599	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	169	junction_1	42.3457510236598	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266746	True	NA	15	True	AATAAA	-17	NA	121268157	121332842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
WTC11_00087305	chr9	+	2712	19	FSM	ENSG00000148180.21	ENST00000449733.7	2702	19	-10	0	-4	0	multi-exon	FALSE	canonical	2	2	junction_2	96.7282849590083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGTGTGGCTCGTTTC	121266746	True	NA	16	True	AATAAA	-18	NA	121268157	121332843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121268220_121281469_121281563_121282438_121282551_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
WTC11_00087306	chr9	+	511	2	FSM	ENSG00000136848.18	ENST00000489314.1	464	2	16	-63	16	0	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGACCCCACGGCCC	121598051	False	NA	NA	False	NA	NA	NA	121598283	121678845	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121598627_121678677
WTC11_00087307	chr9	+	6812	16	FSM	ENSG00000136848.18	ENST00000408936.7	6784	16	-30	2	-30	0	multi-exon	FALSE	canonical	3	11	junction_1	20.0780698496865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	121650625	True	NA	8	True	ATTAAA	-19	NA	121651563	121785528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
WTC11_00087309	chr9	+	6584	14	ISM	ENSG00000136848.18	ENST00000408936.7	6784	16	47519	2	-38038	0	3prime_fragment	FALSE	canonical	3	46	junction_3	12.0609889984736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	121698490	True	NA	8	True	ATTAAA	-19	NA	121699112	121785528	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
WTC11_00087310	chr9	+	5193	15	ISM	ENSG00000136848.18	ENST00000259371.7	5514	17	132313	0	-37781	0	3prime_fragment	FALSE	canonical	3	28	junction_14	15.2578183371072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	121699359	False	NA	8	True	ATTAAA	-19	NA	121699369	121785528	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330_121782402_121783535
WTC11_00087313	chr9	+	9580	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	14	0	-14	multi-exon	FALSE	canonical	3	134	junction_1	15.2388392675499	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTATTATAAAATGATAA	122261699	True	NA	NA	False	ATTAAA	-7	NA	122264881	122331323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
WTC11_00087317	chr9	+	1981	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	-12	-783	0	0	multi-exon	FALSE	canonical	3	14	junction_4	64.2470816457837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	122261731	True	NA	13	True	AATAAA	-23	NA	122264913	122323461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
WTC11_00087319	chr9	+	1616	8	FSM	ENSG00000148187.18	ENST00000489572.5	1599	8	-17	0	-17	0	multi-exon	FALSE	canonical	3	14	junction_3	68.1184442642343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	122267648	False	NA	NA	False	AATAAA	-43	NA	122270830	122323088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
WTC11_00087324	chr9	+	5002	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	-16	0	-16	0	multi-exon	FALSE	canonical	3	164	junction_1	18.9937252796812	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	122934500	True	NA	13	True	ATTAAA	-19	NA	122941003	123104866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
WTC11_00087325	chr9	+	4992	26	NIC	ENSG00000011454.18	novel	4986	26	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	31.0302046399955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	122934505	True	NA	13	True	ATTAAA	-19	NA	122941008	123104866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_122941089_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
WTC11_00087328	chr9	+	3492	10	FSM	ENSG00000119408.17	ENST00000320246.10	3468	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	260	junction_1	21.4049723079983	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	124254753	True	NA	NA	False	NA	NA	NA	124257924	124353307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124258086_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
WTC11_00087329	chr9	+	3633	11	FSM	ENSG00000119408.17	ENST00000373600.7	3619	11	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	117.365412281472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	124254777	True	NA	NA	False	NA	NA	NA	124257948	124353307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124258086_124292848_124293014_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
WTC11_00087330	chr9	+	1985	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	-976	316	-976	0	multi-exon	FALSE	canonical	0	0	junction_1	589.792242140306	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTAGTCTATACATTGC	124868151	False	NA	3	True	AATAAA	-9	NA	124868228	124877401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
WTC11_00087331	chr9	+	1877	3	FSM	ENSG00000136950.13	ENST00000465124.1	1877	3	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_2	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTAGTCTATACATTGC	124872529	False	NA	3	True	AATAAA	-9	NA	124872588	124877401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124873765_124874974_124875152_124876877
WTC11_00087334	chr9	+	1550	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	-3	124	-3	-121	multi-exon	FALSE	canonical	3	158	junction_4	55.3552534239764	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTTTTATACCTCCAAA	125197134	True	NA	17	True	AGTAAA	-6	NA	125200538	125234037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
WTC11_00087335	chr9	+	1247	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	-3	69	-3	-69	multi-exon	FALSE	canonical	3	26	junction_4	109.263022854328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGGTAGGTGAAGAAA	125197134	True	NA	69	True	NA	NA	NA	125200538	125234089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
WTC11_00087336	chr9	+	1400	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	-3	69	-3	-69	multi-exon	FALSE	canonical	3	62	junction_1	79.9730423330262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGGTAGGTGAAGAAA	125197134	True	NA	69	True	NA	NA	NA	125200538	125234089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
WTC11_00087337	chr9	+	1471	10	FSM	ENSG00000136933.17	ENST00000628863.2	1537	10	-3	69	-3	-69	multi-exon	FALSE	canonical	3	6	junction_5	118.064117336594	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGGTAGGTGAAGAAA	125197134	True	NA	69	True	NA	NA	NA	125200538	125234089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220326_125220398_125220538_125220701_125227909_125228060_125232595_125232746_125233687
WTC11_00087343	chr9	+	9197	28	FSM	ENSG00000165219.23	ENST00000297933.11	9176	28	-21	0	-5	0	multi-exon	FALSE	canonical	3	8	junction_2	39.8091124254079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	125258660	True	NA	22	True	ATTAAA	-27	NA	125261804	125367207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
WTC11_00087355	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	34.8532638356869	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125746969	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
WTC11_00087356	chr9	+	950	7	FSM	ENSG00000167081.18	ENST00000373492.6	950	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	57.5540808476881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCACACTTTTCCC	125747050	False	NA	NA	False	NA	NA	NA	125747453	125965923	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
WTC11_00087357	chr9	+	1130	8	FSM	ENSG00000167081.18	ENST00000373482.6	1130	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	54.9151479046333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCGTTTTTGTAGCCCA	125747050	False	NA	NA	False	NA	NA	NA	125747453	125965990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
WTC11_00087360	chr9	+	4872	10	FSM	ENSG00000196814.15	ENST00000361171.8	4838	10	-35	1	-35	-1	multi-exon	FALSE	canonical	3	12	junction_5	4.44999653211129	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGTTTGCTGTCGTGG	126326744	False	NA	9	True	AATAAA	-19	NA	126326793	126507039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126327011_126340507_126340631_126381063_126381172_126386561_126386659_126392065_126392196_126395574_126395698_126421853_126421949_126481368_126481425_126483972_126484033_126503176
WTC11_00087361	chr9	+	3981	3	FSM	ENSG00000196814.15	ENST00000485886.1	4537	3	556	0	556	0	multi-exon	FALSE	canonical	3	19	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTGCTGTCGTGGTG	NA	False	NA	11	True	AATAAA	-21	NA	126481368	126507041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126481425_126483972_126484033_126503176
WTC11_00087364	chr9	+	5957	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	-17	0	-10	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	126803337	True	NA	13	True	AATAAA	-24	NA	126805022	126838210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126805133_126808792_126808916_126832486
WTC11_00087365	chr9	+	5851	2	FSM	ENSG00000169155.10	ENST00000449886.5	5851	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	126803320	True	NA	13	True	AATAAA	-24	NA	126805005	126838210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126805133_126832486
WTC11_00087366	chr9	+	6742	3	NNC	ENSG00000177125.5	novel	6564	2	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	11	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGGTCTCCCTCTG	126858587	True	NA	33	True	AATAAA	-18	NA	126860607	126885878	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_126860740_126863591_126863713_126879389
WTC11_00087367	chr9	+	6564	2	FSM	ENSG00000177125.5	ENST00000319119.4	6564	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGGTCTCCCTCTG	126858644	True	NA	33	True	AATAAA	-18	NA	126860664	126885878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126860740_126879389
WTC11_00087368	chr9	+	2363	18	FSM	ENSG00000136828.19	ENST00000424082.6	2362	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	45	junction_17	15.3512507521042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACATCGCAGTGACT	126913077	True	NA	115	True	AAGAAA	-28	NA	126914772	127217445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
WTC11_00087370	chr9	+	791	7	FSM	ENSG00000136828.19	ENST00000319107.8	770	7	-21	0	0	0	multi-exon	FALSE	canonical	2	28	junction_5	22.3513608832512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGAGTTTGAATTGGCT	126913110	True	NA	NA	False	AATATA	-39	NA	126914805	127069355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127052846_127052940_127069229
WTC11_00087374	chr9	+	544	5	FSM	ENSG00000136895.19	ENST00000446764.5	523	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	13	junction_2	9.82344135219425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTAGAGAACCCAGAATA	127224921	True	NA	NA	False	NA	NA	NA	127225217	127311677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127225404_127243078_127243250_127264951_127265022_127291167_127291243_127311635
WTC11_00087375	chr9	+	653	7	FSM	ENSG00000136895.19	ENST00000441134.5	653	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	12.6414222125343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCTAATGGGTAGAA	127225058	False	NA	NA	False	NA	NA	NA	127225354	127318127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127225404_127243078_127243254_127264951_127265022_127291167_127291243_127311635_127311736_127313440_127313560_127318062
WTC11_00087380	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	78.3341872872833	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	127394546	True	NA	NA	False	NA	NA	NA	127397137	127407855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
WTC11_00087381	chr9	+	2162	10	FSM	ENSG00000136856.18	ENST00000373371.8	2145	10	-24	7	7	-7	multi-exon	FALSE	canonical	3	131	junction_2	52.1914803132077	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCTTTTGTTCT	127394553	True	NA	NA	False	AATAAA	-27	NA	127397144	127407891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
WTC11_00087384	chr9	+	1954	9	FSM	ENSG00000136856.18	ENST00000373360.7	1937	9	-24	7	0	-7	multi-exon	FALSE	canonical	3	25	junction_8	77.6650460310171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCTTTTGTTCT	127394615	True	NA	NA	False	AATAAA	-27	NA	127397206	127407891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127407111
WTC11_00087390	chr9	+	2176	6	FSM	ENSG00000196152.10	ENST00000543471.5	2194	6	18	0	10	0	multi-exon	FALSE	canonical	3	10	junction_2	13.7171425595858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423609	True	NA	10	True	AATAAA	-23	NA	127424391	127445371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127424804_127428551_127428661_127428831_127428921_127435089_127435217_127435907_127436004_127444028
WTC11_00087391	chr9	+	2174	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	18	0	10	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3768937944866	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423609	True	NA	10	True	AATAAA	-23	NA	127424391	127445371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
WTC11_00087392	chr9	+	3260	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	10	-1192	10	1192	multi-exon	FALSE	canonical	3	12	junction_1	11.5190060335083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAAAGTGCTGGGATTG	127423609	True	NA	NA	False	NA	NA	NA	127424391	127446564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
WTC11_00087394	chr9	+	3388	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	-26	14	-2	0	multi-exon	TRUE	canonical	3	131	junction_2	21.0771977238173	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	127451474	True	NA	5	True	AATAAA	-2	NA	127451486	127503485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00087395	chr9	+	3130	26	FSM	ENSG00000148356.15	ENST00000675641.1	3130	26	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	35.995421931129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449875	True	NA	19	True	AATAAA	-16	NA	127451504	127503499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00087396	chr9	+	3044	25	FSM	ENSG00000148356.15	ENST00000675572.1	3026	25	-18	0	-2	0	multi-exon	FALSE	canonical	3	10	junction_21	39.5123046938827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127451474	True	NA	19	True	AATAAA	-16	NA	127451486	127503499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00087397	chr9	+	3031	25	FSM	ENSG00000148356.15	ENST00000674771.1	3031	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	47.838251053826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449875	True	NA	19	True	AATAAA	-16	NA	127451504	127503499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00087398	chr9	+	3143	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	-23	0	-2	0	multi-exon	FALSE	canonical	3	117	junction_1	23.245679168396	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127451474	True	NA	19	True	AATAAA	-16	NA	127451486	127503499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00087406	chr9	+	3766	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	-12	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	17.4674300087652	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	127609309	True	NA	7	True	AATAAA	-20	NA	127612264	127692699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
WTC11_00087408	chr9	+	2222	20	NIC	ENSG00000136854.24	novel	3925	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	42.7878228463837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCTTATACATGTATC	127609310	True	NA	20	True	AAGAAA	-25	NA	127612265	127691061	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127612441_127642468_127642564_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
WTC11_00087410	chr9	+	585	2	FSM	ENSG00000136854.24	ENST00000496504.3	591	2	0	6	0	-6	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGGACATGTTCCTCA	127661122	False	NA	NA	False	GATAAA	-19	NA	127661132	127663716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127661206_127663204
WTC11_00087413	chr9	+	2539	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	-56	0	56	multi-exon	FALSE	canonical	3	879	junction_5	61.170299619632	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATCTCGGCTCACT	127777373	True	NA	NA	False	NA	NA	NA	127786033	127790848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
WTC11_00087415	chr9	+	2308	15	FSM	ENSG00000136877.15	ENST00000373247.7	2284	15	-24	0	0	0	multi-exon	FALSE	canonical	3	457	junction_10	34.7134773568434	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	127797382	True	NA	29	True	ATTAAA	-40	NA	127802857	127814081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
WTC11_00087417	chr9	+	3086	14	FSM	ENSG00000136877.15	ENST00000630236.2	2160	14	0	-926	0	680	multi-exon	FALSE	canonical	3	19	junction_9	141.376286688645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCACTGGTTTCATGGT	127797382	True	NA	NA	False	NA	NA	NA	127802857	127815007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
WTC11_00087420	chr9	+	912	8	FSM	ENSG00000136877.15	ENST00000475765.5	898	8	-14	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	27.1706624497671	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCATTTCAGGAGG	127797442	True	NA	NA	False	NA	NA	NA	127802917	127807849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585
WTC11_00087423	chr9	+	2294	15	FSM	ENSG00000136877.15	ENST00000373225.7	2278	15	-16	0	-16	0	multi-exon	FALSE	canonical	3	48	junction_1	130.346085636725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAAGCCTTCGACT	127803179	False	NA	7	True	ATTAAA	-18	NA	127803191	127814059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803405_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
WTC11_00087429	chr9	+	3447	10	FSM	ENSG00000148339.13	ENST00000373068.6	3431	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	51	junction_1	9.03081145609604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAGCCAGTATTTTT	128067427	True	NA	11	True	AATAAA	-16	NA	128068184	128109244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
WTC11_00087431	chr9	+	3456	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	18	0	18	0	multi-exon	FALSE	canonical	3	11	junction_1	20.8599089755717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	128098308	False	NA	12	True	AATAAA	-17	NA	128098321	128109245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
WTC11_00087434	chr9	+	409	5	FSM	ENSG00000148346.12	ENST00000488391.5	485	5	76	0	76	0	multi-exon	FALSE	canonical	3	14	junction_4	4.84767985741633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCCGAACACCATTGA	128151402	False	NA	NA	False	NA	NA	NA	128151575	128153328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
WTC11_00087436	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	128152144	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128160487_128163442
WTC11_00087437	chr9	+	1719	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	-113	-36	-64	2	multi-exon	FALSE	canonical	3	28	junction_1	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCCTCTCTCCTCTGT	128160027	False	NA	16	True	ATTAAA	-16	NA	128160200	128163926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128160487_128162003_128162953_128163442
WTC11_00087439	chr9	+	3853	21	FSM	ENSG00000106976.21	ENST00000628346.2	3835	21	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	134.999481480486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	128198189	True	NA	23	True	AATAAA	-24	NA	128203378	128255244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254005
WTC11_00087440	chr9	+	4734	22	FSM	ENSG00000106976.21	ENST00000627543.2	4734	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	132.958145597499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCTGCTGGTTGTGTT	128198227	True	NA	25	True	AATAAA	-26	NA	128203416	128255246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100
WTC11_00087442	chr9	+	6045	11	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	-2209	0	intron_retention	FALSE	canonical	3	120	junction_6	87.5764808610166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	128230380	False	NA	23	True	AATAAA	-24	NA	128230426	128255244	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
WTC11_00087446	chr9	+	3442	2	FSM	ENSG00000106976.21	ENST00000630850.1	3442	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGCTGGTTGTGTTCT	128250258	False	NA	27	True	AATAAA	-28	NA	128250938	128255248	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128253138_128254005
WTC11_00087448	chr9	+	785	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	-22	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	17.4266319178434	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	128276206	False	NA	17	True	AATAAA	-17	NA	128276221	128288989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
WTC11_00087449	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	68.1189217471915	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	128276206	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
WTC11_00087450	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	128322475	False	NA	8	True	AATAAA	-25	NA	128322581	128323584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015_128323148_128323282
WTC11_00087451	chr9	+	1536	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	-295	4	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.8271140814808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGTCTGCTTGTCCTC	128322520	False	NA	8	True	AATAAA	-14	NA	128322543	128334068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
WTC11_00087452	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	128322520	False	NA	10	True	AATAAA	-27	NA	128322543	128323586	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015
WTC11_00087454	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_6	13.6554832291729	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	128340019	True	NA	7	True	NA	NA	NA	128340526	128361470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
WTC11_00087455	chr9	+	718	1	FSM	ENSG00000223551.1	ENST00000323496.5	618	1	-96	-4	-96	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACGTCTCACTACACCC	128342037	False	NA	4	True	AATAAA	-26	NA	128342056	128342774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128342100_128342800
WTC11_00087456	chr9	+	2587	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	8	0	-8	multi-exon	FALSE	canonical	3	558	junction_1	34.237223894469	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGAAGATTTTTCTTTA	128363568	True	NA	6	True	AATAAA	-18	NA	128371373	128392008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
WTC11_00087457	chr9	+	1417	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	-50	-644	-50	0	multi-exon	FALSE	canonical	3	59	junction_1	238.022582962205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	128363505	True	NA	18	True	AATAAA	-19	NA	128371310	128390734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
WTC11_00087459	chr9	+	3059	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	558	junction_1	45.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	128363541	True	NA	18	True	AATAAA	-19	NA	128371346	128390734	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128378035_128378107_128387815
WTC11_00087460	chr9	+	2308	13	FSM	ENSG00000167123.20	ENST00000372838.9	2308	13	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	9.07798007390533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATGTATGTATATA	128420151	True	NA	NA	False	AATAAA	-19	NA	128420856	128437347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431304_128434101_128434230_128434409_128434614_128435652_128435906_128436848
WTC11_00087462	chr9	+	708	5	FSM	ENSG00000136811.17	ENST00000444993.6	1007	5	-7	306	-7	-306	multi-exon	FALSE	canonical	3	12	junction_3	32.368001173999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTCACCCTTGCCCAG	128454224	True	NA	NA	False	NA	NA	NA	128456121	128461067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460549_128460667_128460941
WTC11_00087463	chr9	+	1032	6	FSM	ENSG00000136811.17	ENST00000469582.6	1054	6	22	0	-6	0	multi-exon	FALSE	canonical	3	17	junction_1	28.9095140049085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCCCGGGCTTCAGTT	128454225	True	NA	NA	False	NA	NA	NA	128456122	128469470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182
WTC11_00087464	chr9	+	2184	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	65	0	-7	0	multi-exon	FALSE	canonical	3	15	junction_2	27.1825107171668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	128454224	True	NA	11	True	AATAAA	-20	NA	128456121	128494839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
WTC11_00087465	chr9	+	3783	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	40	-32	-7	0	multi-exon	FALSE	canonical	3	70	junction_4	16.6826256926181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	128454224	True	NA	35	True	NA	NA	NA	128456121	128501292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00087467	chr9	+	3600	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	33.0468642702335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTGTAATCAGTTATT	128454260	True	NA	8	True	NA	NA	NA	128456157	128500942	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460549_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00087470	chr9	+	2151	3	FSM	ENSG00000136811.17	ENST00000488909.1	1525	3	-70	-556	-70	-13	multi-exon	FALSE	canonical	3	118	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATCAGTTATTTAAGG	NA	False	NA	13	True	AAAAAG	-4	NA	128497431	128500947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128498576_128499000_128499127_128500066
WTC11_00087472	chr9	+	3326	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	-24	0	-2	0	multi-exon	FALSE	canonical	3	115	junction_1	16.8715407977128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	128502594	True	NA	17	True	AATAAA	-19	NA	128504694	128542288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
WTC11_00087474	chr9	+	3618	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	-18	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.9105173588014	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	128502618	True	NA	NA	False	NA	NA	NA	128504718	128542479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
WTC11_00087476	chr9	+	7889	56	FSM	ENSG00000197694.18	ENST00000372731.8	7889	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	154.033816186335	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128543233	True	NA	17	True	AATAAA	-18	NA	128552557	128633662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
WTC11_00087477	chr9	+	4105	25	FSM	ENSG00000197694.18	ENST00000625282.2	4102	25	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.976684563241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCTTTTGTTTGTTTGTT	128543262	True	NA	NA	False	AAAAAG	-18	NA	128552586	128599495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962
WTC11_00087478	chr9	+	7800	55	FSM	ENSG00000197694.18	ENST00000358161.9	7794	55	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	141.2026775919	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128543262	True	NA	17	True	AATAAA	-18	NA	128552586	128633662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
WTC11_00087479	chr9	+	7881	56	FSM	ENSG00000197694.18	ENST00000630804.2	7812	56	-69	0	-40	0	multi-exon	FALSE	canonical	0	0	junction_4	140.097680209203	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGCTTTTCTTCAT	128552506	False	NA	14	True	AATAAA	-15	NA	128552517	128633659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
WTC11_00087480	chr9	+	7944	57	FSM	ENSG00000197694.18	ENST00000372739.7	7875	57	-69	0	-40	0	multi-exon	FALSE	canonical	0	0	junction_4	152.705163724287	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128552506	False	NA	17	True	AATAAA	-18	NA	128552517	128633662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
WTC11_00087491	chr9	+	2872	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	1766	junction_1	1641.96654120874	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTCTCCTTGTTTTAT	128683616	False	NA	23	True	AATAAA	-28	NA	128683632	128696400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
WTC11_00087492	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4659	junction_1	683.221032749898	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	128642211	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
WTC11_00087497	chr9	+	3393	22	FSM	ENSG00000160447.7	ENST00000291906.5	3393	22	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3129757102738	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	128701880	True	NA	25	True	ATTAAA	-13	NA	128702502	128720916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
WTC11_00087500	chr9	+	3858	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	-3	0	-3	0	multi-exon	FALSE	canonical	3	177	junction_9	22.3935498387407	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	128783675	True	NA	28	True	AATAAA	-22	NA	128787249	128810430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
WTC11_00087501	chr9	+	1145	3	FSM	ENSG00000167136.7	ENST00000372642.5	1145	3	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_1	24.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTCTGGTGGCGTCCG	128817161	True	NA	26	True	ATTAAA	-17	NA	128818499	128822676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128819186_128820738_128820849_128822327
WTC11_00087502	chr9	+	4351	4	FSM	ENSG00000136802.12	ENST00000372600.9	4334	4	-20	3	-20	0	multi-exon	FALSE	canonical	3	733	junction_3	21.7408984788271	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGCCTTTGGAGGTCT	128876342	True	NA	12	True	AATAAA	-12	NA	128882112	128918036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128882251_128886014_128886122_128907156_128909322_128916095
WTC11_00087505	chr9	+	1182	10	FSM	ENSG00000175287.19	ENST00000421063.6	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	27.9554319022173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTACTGAGCCTTCTTTC	128921598	True	NA	14	True	AATAAA	-21	NA	128922282	128942041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
WTC11_00087507	chr9	+	389	6	FSM	ENSG00000095319.14	ENST00000491990.5	381	6	-8	0	0	0	multi-exon	FALSE	canonical	2	19	junction_5	275.288648512793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGTAGTCACCATTT	128934284	True	NA	NA	False	NA	NA	NA	128947698	128958054	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958013
WTC11_00087508	chr9	+	5705	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	-16	0	-16	0	multi-exon	FALSE	canonical	3	475	junction_1	80.0905247699327	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934268	True	NA	32	True	ATTAAA	-17	NA	128947682	129007096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
WTC11_00087509	chr9	+	886	5	FSM	ENSG00000095319.14	ENST00000550219.1	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	303.007425651584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTCGGGACTCAGTAAA	128934602	False	NA	NA	False	NA	NA	NA	128948016	128957011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128948629_128949188_128949244_128952772_128952847_128956349_128956435_128956951
WTC11_00087516	chr9	+	4248	16	NIC	ENSG00000148343.19	novel	4345	17	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	67	junction_1	19.2935222289762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	129034182	True	NA	6	True	AATAAA	-12	NA	129036619	129072071	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
WTC11_00087517	chr9	+	3615	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	-6	1	-1	-1	multi-exon	FALSE	canonical	3	32	junction_13	25.9714373024589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCATGTTGTTGGTT	129034182	True	NA	16	True	AATAAA	-22	NA	129036619	129072081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
WTC11_00087518	chr9	+	3636	16	FSM	ENSG00000148343.19	ENST00000358369.8	3637	16	0	1	0	-1	multi-exon	FALSE	canonical	3	6	junction_1	34.404392484423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCATGTTGTTGGTT	129036920	True	NA	16	True	AATAAA	-22	NA	129036933	129072081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129037017_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
WTC11_00087522	chr9	+	2176	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	289	junction_6	14.4603610195709	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076248	True	NA	17	True	AATAAA	-17	NA	129081103	129090438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
WTC11_00087523	chr9	+	2044	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	32	junction_5	107.047367500975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076248	True	NA	14	True	AATAAA	-14	NA	129081103	129090435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
WTC11_00087525	chr9	+	1929	6	FSM	ENSG00000167130.18	ENST00000327812.12	1932	6	0	3	0	0	multi-exon	FALSE	canonical	2	7	junction_2	148.134263423423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076278	True	NA	14	True	AATAAA	-14	NA	129081133	129090435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086708_129086799_129088970
WTC11_00087526	chr9	+	964	9	FSM	ENSG00000119383.21	ENST00000455292.6	949	9	-15	0	-1	0	multi-exon	FALSE	canonical	3	10	junction_1	337.352907761294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGCCCTTCATCTGG	129110658	True	NA	NA	False	NA	NA	NA	129110948	129136556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470
WTC11_00087527	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.623063451906	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	129110659	True	NA	23	True	ATTAAA	-20	NA	129110949	129148944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
WTC11_00087528	chr9	+	2832	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	-86	0	-9	0	multi-exon	FALSE	canonical	3	44	junction_4	273.366804861161	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129100319	True	NA	24	True	ATTAAA	-21	NA	129111326	129148945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
WTC11_00087529	chr9	+	2649	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	4	0	4	0	multi-exon	FALSE	canonical	3	56	junction_2	222.589553607082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129100310	True	NA	24	True	ATTAAA	-21	NA	129111317	129148945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
WTC11_00087531	chr9	+	2642	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	-2	0	0	0	multi-exon	FALSE	canonical	3	618	junction_6	71.0192114505767	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100405	True	NA	25	True	ATTAAA	-22	NA	129111412	129148946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
WTC11_00087540	chr9	+	1112	4	FSM	ENSG00000233901.7	ENST00000654735.1	1112	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	NA	False	NA	24	True	ATTAAA	-29	NA	129333772	129347477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129334199_129338791_129338918_129341735_129342044_129347225
WTC11_00087541	chr9	+	1349	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	-76	-201	-29	0	multi-exon	FALSE	canonical	3	81	junction_1	247.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129626109	False	NA	NA	False	AATAAA	-34	NA	129626123	129636131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129634053_129634307_129635207
WTC11_00087542	chr9	+	1501	4	FSM	ENSG00000148335.15	ENST00000481189.1	576	4	-51	-874	-29	0	multi-exon	FALSE	canonical	3	90	junction_2	268.260238491573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129626109	False	NA	NA	False	AATAAA	-34	NA	129626123	129636131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129632649_129632802_129634053_129634307_129635207
WTC11_00087543	chr9	+	1571	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	-9	0	-9	0	multi-exon	TRUE	canonical	3	32	junction_1	256.916761271471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618160	True	NA	NA	False	AATAAA	-34	NA	129626143	129636131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
WTC11_00087544	chr9	+	1545	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	-19	4	-9	0	multi-exon	FALSE	canonical	3	576	junction_3	65.5303152916436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618160	True	NA	NA	False	AATAAA	-34	NA	129626143	129636131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
WTC11_00087547	chr9	+	1305	4	FSM	ENSG00000167157.11	ENST00000372469.6	1305	4	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_1	11.1455023315337	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCAGGAAGGTGGGTAA	129665005	True	NA	12	True	AATAAA	-23	NA	129665646	129722674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129666127_129719230_129719419_129720595_129720775_129722216
WTC11_00087548	chr9	+	861	2	FSM	ENSG00000136816.16	ENST00000486372.1	663	2	0	-198	0	198	multi-exon	FALSE	canonical	3	76	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAACCCCATCTCTACC	129801064	True	NA	NA	False	NA	NA	NA	129803156	129804678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129803412_129804072
WTC11_00087549	chr9	+	2752	5	FSM	ENSG00000136816.16	ENST00000259339.7	2738	5	-14	0	13	0	multi-exon	FALSE	canonical	0	0	junction_2	28.4033448734476	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCGTTACTGATTTG	129801077	True	NA	15	True	AATAAA	-17	NA	129803169	129811281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129803412_129804072_129804339_129807187_129807364_129808904_129809033_129809341
WTC11_00087550	chr9	+	4299	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	-6	0	-6	0	multi-exon	FALSE	canonical	3	50	junction_1	19.204332844439	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833951	True	NA	9	True	AATAAA	-16	NA	129835451	129881828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
WTC11_00087551	chr9	+	4476	25	FSM	ENSG00000136878.14	ENST00000315480.9	4470	25	-6	0	-6	0	multi-exon	FALSE	canonical	3	50	junction_1	19.2987747883987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833951	True	NA	9	True	AATAAA	-16	NA	129835451	129881828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112
WTC11_00087554	chr9	+	200	1	FSM	ENSG00000270755.1	ENST00000605780.1	369	1	207	-38	207	38	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCACCCCCATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	130044919	130045119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130044900_130045100
WTC11_00087555	chr9	+	7303	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	-317	5	-37	0	multi-exon	FALSE	canonical	0	0	junction_14	20.631690833925	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	NA	False	NA	16	True	AATAAA	-16	NA	130053388	130140164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
WTC11_00087556	chr9	+	2292	14	ISM	ENSG00000148358.20	ENST00000610997.1	2813	20	-194	27800	25	17417	5prime_fragment	FALSE	canonical	3	49	junction_13	8.54088669648124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCTGACTCTATT	130053606	True	NA	10	True	AATAAA	-24	NA	130053730	130108323	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495
WTC11_00087557	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.116470552034	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	130050358	True	NA	16	True	AATAAA	-16	NA	130053905	130140164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
WTC11_00087558	chr9	+	5352	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	-188	0	-188	0	multi-exon	FALSE	canonical	3	199	junction_2	23.2712487934826	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	130172197	False	NA	15	True	ATTAAA	-25	NA	130172215	130237303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
WTC11_00087559	chr9	+	1654	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	-141	19	-141	0	multi-exon	FALSE	canonical	3	317	junction_1	43.0960010456011	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	130437701	True	NA	11	True	ATTAAA	-6	NA	130444819	130501255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
WTC11_00087560	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	143.462639348678	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	130437869	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
WTC11_00087561	chr9	+	811	8	FSM	ENSG00000130707.18	ENST00000422569.5	807	8	-4	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	146.449824241643	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATCCCCCAAACCCCA	130437869	False	NA	NA	False	NA	NA	NA	130444987	130471513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130445199_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484
WTC11_00087562	chr9	+	2825	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	58	-655	58	655	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTAAATGTTCCTA	NA	False	NA	NA	False	NA	NA	NA	130579022	130582741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130579765_130580658
WTC11_00087563	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_17	52.8382110144721	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570837	True	NA	34	True	AATAAA	-31	NA	130579576	130638352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
WTC11_00087569	chr9	+	1967	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-31	-8	-7	2	multi-exon	FALSE	canonical	3	10	junction_5	71.8836929082142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	130687491	True	NA	7	True	NA	NA	NA	130693748	130704894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
WTC11_00087572	chr9	+	2032	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	-20	0	4	0	multi-exon	FALSE	canonical	3	204	junction_7	7.18396652275051	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	130687502	True	NA	5	True	NA	NA	NA	130693759	130704892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
WTC11_00087574	chr9	+	4754	11	FSM	ENSG00000097007.19	ENST00000372348.7	4754	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	72.6022726917002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTCAGGGGTCAGGTG	130712971	False	NA	NA	False	NA	NA	NA	130713015	130885683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130714456_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
WTC11_00087575	chr9	+	5594	11	FSM	ENSG00000097007.19	ENST00000318560.6	5578	11	-18	2	-18	-2	multi-exon	FALSE	canonical	3	174	junction_1	31.816505150629	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGGCAGATTGCTTC	130832670	True	NA	25	True	AATAAA	-17	NA	130835235	130887673	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130835526_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
WTC11_00087577	chr9	+	6041	28	FSM	ENSG00000050555.19	ENST00000361069.9	7455	28	0	1414	0	1001	multi-exon	FALSE	canonical	3	107	junction_3	25.142283721393	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTGGTGTGCCTCACCC	131005836	True	NA	2	True	AATAAA	-17	NA	131009173	131093059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131052490_131052684_131052849_131052966_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
WTC11_00087578	chr9	+	3524	6	FSM	ENSG00000050555.19	ENST00000678544.1	2572	6	9	-961	9	961	multi-exon	FALSE	canonical	3	150	junction_2	24.2701462706758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCGTTGAACGTGGAAA	131077795	False	NA	-38	True	NA	NA	NA	131077807	131093019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
WTC11_00087581	chr9	+	3886	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	-489	1	-435	0	multi-exon	TRUE	canonical	3	146	junction_1	427.368412496759	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	NA	False	NA	26	True	AATAAA	-14	NA	131096040	131123144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
WTC11_00087582	chr9	+	3375	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	-1	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	56.9792944849267	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	131079129	True	NA	26	True	AATAAA	-14	NA	131096529	131123144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
WTC11_00087584	chr9	+	6545	36	FSM	ENSG00000126883.18	ENST00000652454.1	6537	36	-8	0	2	0	multi-exon	FALSE	canonical	2	2	junction_12	39.6896120681779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTAAACAGTCTGTTTC	131117720	True	NA	0	True	NA	NA	NA	131125587	131233678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146164_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00087585	chr9	+	7566	36	FSM	ENSG00000126883.18	ENST00000359428.10	7568	36	2	0	2	0	multi-exon	FALSE	canonical	3	96	junction_12	31.9280313153422	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	131117720	True	NA	10	True	AATAAA	-19	NA	131125587	131234663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00087586	chr9	+	7536	36	FSM	ENSG00000126883.18	ENST00000411637.6	7538	36	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_12	42.9101006138867	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	131117720	True	NA	10	True	AATAAA	-19	NA	131125587	131234663	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146161_131146305_131147486_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00087590	chr9	+	2089	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	131289459	True	NA	8	True	AATACA	-18	NA	131289698	131309261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131290449_131307922
WTC11_00087593	chr9	+	11253	32	FSM	ENSG00000288701.1	ENST00000684596.1	11253	32	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_20	70.2441705507152	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	131382772	True	NA	-8	True	NA	NA	NA	131394052	131500171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00087594	chr9	+	9774	32	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	-3	-1439	combination_of_known_junctions	FALSE	canonical	3	140	junction_15	67.4925054613053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTCACTTTTGCCTGT	131382809	True	NA	NA	False	NA	NA	NA	131394089	131498732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00087595	chr9	+	11238	32	FSM	ENSG00000288701.1	ENST00000683519.1	11238	32	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	74.9754729232329	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGAACGTGCTTTCT	131382805	True	NA	14	True	AATAAA	-16	NA	131394085	131500193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00087596	chr9	+	9164	31	FSM	ENSG00000288701.1	ENST00000682501.1	9157	31	-7	0	0	0	multi-exon	FALSE	canonical	3	92	junction_15	73.8004516698012	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGTGCTTTCTCAGG	131382805	True	NA	18	True	AATAAA	-20	NA	131394085	131500197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00087600	chr9	+	4950	5	FSM	ENSG00000288701.1	ENST00000683161.1	4950	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	82.2446806790567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGTGCTTTCTCAGG	131487263	False	NA	18	True	AATAAA	-20	NA	131487291	131500197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00087601	chr9	+	7779	3	FSM	ENSG00000231587.1_ENSG00000288701.1	ENST00000684112.1	5366	3	-2420	7	1053	0	multi-exon	FALSE	canonical	3	189	junction_2	107.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGCTGAACGTGCTT	131488332	False	NA	11	True	AATAAA	-13	NA	131488344	131500190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131491581_131492168_131492261_131495739
WTC11_00087604	chr9	+	3071	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	-14	0	-2	0	multi-exon	FALSE	canonical	3	46	junction_2	26.076915848432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501409	True	NA	14	True	ATTAAA	-17	NA	131502903	131523799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00087605	chr9	+	2926	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	9	0	-2	0	multi-exon	FALSE	canonical	3	35	junction_1	27.5444085876688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	131501409	True	NA	21	True	ATTAAA	-24	NA	131502903	131523806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00087609	chr9	+	3657	17	FSM	ENSG00000130714.19	ENST00000678546.1	3646	17	-11	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	28.005510060522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACAGCTCCATGCCTTT	131501449	True	NA	-44	True	NA	NA	NA	131502943	131523741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00087615	chr9	+	3833	19	FSM	ENSG00000130714.19	ENST00000678264.2	3958	19	125	0	125	0	multi-exon	FALSE	canonical	3	5	junction_1	33.0962401355669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTTTGTAGTTGGTGTTT	131503550	False	NA	11	True	ATTAAA	-14	NA	131503562	131523796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131504650_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00087621	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	10.988630487918	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	132667107	True	NA	15	True	AATAAA	-18	NA	132670463	132694953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
WTC11_00087622	chr9	+	1772	1	FSM	ENSG00000196205.8	ENST00000436459.2	1389	1	-65	-318	-65	318	mono-exon	FALSE	NA	NA	NA	NA	NA	1100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAATATTTTGAGAAAC	132722849	True	NA	NA	False	ATTAAA	-40	NA	133019420	133021192	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133019400_133021200
WTC11_00087624	chr9	+	2412	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	-302	0	-9	0	multi-exon	FALSE	canonical	3	111	junction_9	159.604832255602	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030701	133058501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
WTC11_00087626	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_8	51.0141156935999	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	133022041	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
WTC11_00087628	chr9	+	947	6	FSM	ENSG00000148303.17	ENST00000496554.5	947	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2306.46812247644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCACTGTCGCCTTCAC	133241136	True	NA	NA	False	NA	NA	NA	133348217	133350695	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348574_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596
WTC11_00087629	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1042.24878537336	6009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
WTC11_00087630	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1101.84219479117	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
WTC11_00087631	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	1941.44053396924	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	133241170	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
WTC11_00087633	chr9	+	884	8	NNC	ENSG00000148303.17	novel	887	8	NA	NA	0	22510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2044.14954123684	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAAACAGTATGTGA	133347181	True	NA	NA	False	AAAAAG	-1	NA	133348921	133373936	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261_133351424_133373907
WTC11_00087635	chr9	+	839	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	-6	0	-6	0	multi-exon	TRUE	canonical	3	506	junction_5	31.4044582822248	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350440	True	NA	14	True	AATAAA	-16	NA	133356543	133361158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
WTC11_00087638	chr9	+	803	6	NNC	ENSG00000148291.10	novel	833	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	223.540958215715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350480	True	NA	14	True	AATAAA	-16	NA	133356583	133361158	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_133356671_133356913_133357073_133357710_133357815_133359949_133360130_133360264_133360435_133361055
WTC11_00087640	chr9	+	2716	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	-92	64	-90	-3	multi-exon	FALSE	canonical	3	32	junction_2	37.3838943337309	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTGCCTGTGTGTG	NA	False	NA	32	True	AATAAA	-40	NA	133459874	133470784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
WTC11_00087641	chr9	+	2752	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	-13	64	0	-3	multi-exon	FALSE	canonical	3	79	junction_3	13.683932183404	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTGCCTGTGTGTG	133458853	True	NA	32	True	AATAAA	-40	NA	133459964	133470784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
WTC11_00087642	chr9	+	2877	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	0	3	0	-3	multi-exon	FALSE	canonical	3	6	junction_5	46.1761843378164	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTGCCTGTGTGTG	133458853	True	NA	32	True	AATAAA	-40	NA	133459964	133470784	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
WTC11_00087646	chr9	+	2359	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	-59	0	-45	0	multi-exon	FALSE	canonical	3	87	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCTCACACTTATT	134024399	True	NA	NA	False	AATAAA	-19	NA	134025435	134028102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134025537_134025844
WTC11_00087647	chr9	+	5686	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	87	junction_1	12.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	134024440	True	NA	NA	False	ATTAAA	-17	NA	134025476	134031587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134025537_134025844_134026091_134026207
WTC11_00087650	chr9	+	3176	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	-19	0	-19	0	multi-exon	FALSE	canonical	3	228	junction_1	27.1105560348863	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	134126594	True	NA	22	True	AATAAA	-19	NA	134136062	134159968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
WTC11_00087651	chr9	+	5705	10	FSM	ENSG00000186350.12	ENST00000481739.2	5537	10	-168	0	-168	0	multi-exon	TRUE	canonical	3	57	junction_6	6.18440891114478	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCGTGTGGGGACTTTT	134326231	True	NA	28	True	AATACA	-18	NA	134326286	134440585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134326660_134401631_134401883_134408148_134408300_134408939_134409120_134417157_134417328_134421675_134421806_134429107_134429241_134431904_134431997_134434101_134434208_134436466
WTC11_00087655	chr9	+	1013	4	FSM	ENSG00000130558.20	ENST00000277415.15	1014	4	0	1	0	-1	multi-exon	FALSE	canonical	3	83	junction_3	61.9480068731477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGTTCTGAGGACTG	135075411	False	NA	17	True	AATAAA	-16	NA	135075421	135098106	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135097780
WTC11_00087656	chr9	+	2591	6	FSM	ENSG00000130558.20	ENST00000252854.8	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	39.9068916354055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	135075488	False	NA	9	True	AATAAA	-13	NA	135075519	135121178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
WTC11_00087657	chr9	+	2336	6	FSM	ENSG00000130558.20	ENST00000371796.7	2492	6	156	0	156	0	multi-exon	FALSE	canonical	1	1	junction_1	74.1312349822934	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCTTCACTTGTCAT	NA	False	NA	10	True	AATAAA	-14	NA	135087415	135121179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135087443_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
WTC11_00087658	chr9	+	2827	6	FSM	ENSG00000130558.20	ENST00000371793.8	2782	6	-47	2	-47	0	multi-exon	FALSE	canonical	3	121	junction_1	31.8157193852347	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	135086756	True	NA	9	True	AATAAA	-13	NA	135087620	135121178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
WTC11_00087659	chr9	+	1097	4	FSM	ENSG00000130558.20	ENST00000392991.8	1057	4	-40	0	-34	0	multi-exon	FALSE	canonical	3	83	junction_3	57.7484968539345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGCATTCTAAACTGAC	135086769	True	NA	-24	True	AAGAAA	-43	NA	135087633	135098065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135097780
WTC11_00087662	chr9	+	4951	4	NIC	ENSG00000196422.11	novel	936	5	NA	NA	-179	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.3016404408335	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479436	False	NA	16	True	AATAAA	-16	NA	135479483	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_135479725_135482682_135482816_135483949_135484083_135484448
WTC11_00087663	chr9	+	4950	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	1	0	1	0	multi-exon	FALSE	canonical	3	79	junction_1	20.9496751499609	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479245	True	NA	16	True	AATAAA	-16	NA	135479782	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
WTC11_00087664	chr9	+	4769	3	FSM	ENSG00000196422.11	ENST00000401470.3	4769	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	43.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTTCTTTTTAAATC	135483104	False	NA	17	True	AATAAA	-17	NA	135483362	135488893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135483554_135483949_135484083_135484448
WTC11_00087666	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	47.6864760702655	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	135487366	True	NA	14	True	AATAAA	-22	NA	135500681	135504671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
WTC11_00087669	chr9	+	3629	14	FSM	ENSG00000160360.13	ENST00000440944.6	3566	14	-63	0	0	0	multi-exon	TRUE	canonical	3	35	junction_10	6.75347817466091	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	136326662	True	NA	15	True	AATAAA	-15	NA	136327475	136359601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869_136340994_136348696_136348768_136349586_136349764_136355689_136355847_136356341_136356551_136358013
WTC11_00087670	chr9	+	2110	3	FSM	ENSG00000160360.13	ENST00000291775.3	2114	3	4	0	4	0	multi-exon	FALSE	canonical	3	51	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	NA	False	NA	15	True	AATAAA	-15	NA	136355533	136359601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136355847_136356341_136356551_136358013
WTC11_00087671	chr9	+	427	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	-11	0	-8	0	multi-exon	FALSE	canonical	3	1031	junction_2	52.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	136403239	True	NA	NA	False	NA	NA	NA	136410632	136412606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489
WTC11_00087672	chr9	+	1182	6	FSM	ENSG00000165688.12	ENST00000612553.4	1174	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	997	junction_5	64.1853565854393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTGTCTTCAGTCAC	136403239	True	NA	NA	False	NA	NA	NA	136410632	136416904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290
WTC11_00087674	chr9	+	732	5	FSM	ENSG00000165688.12	ENST00000371720.5	713	5	-19	0	-2	0	multi-exon	FALSE	canonical	2	11	junction_4	478.428874024133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTGCACTCCTGGGCTC	136403245	True	NA	NA	False	NA	NA	NA	136410638	136416555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136416290
WTC11_00087675	chr9	+	2105	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	-19	0	-2	0	multi-exon	FALSE	canonical	3	762	junction_6	108.476155854127	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	136403245	True	NA	26	True	AATAAA	-19	NA	136410638	136423761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
WTC11_00087679	chr9	+	2316	6	FSM	ENSG00000165688.12	ENST00000444897.2	2316	6	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_1	71.4047617459788	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGTGTTTTCCTTCTC	136417158	True	NA	25	True	AATAAA	-18	NA	136417193	136423760	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831
WTC11_00087683	chr9	+	1337	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	-55	0	-51	0	multi-exon	FALSE	canonical	3	400	junction_1	131.034108155091	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	136660188	True	NA	NA	False	AATAAA	-13	NA	136665736	136672678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
WTC11_00087684	chr9	+	1048	7	NIC	ENSG00000172889.16	novel	1282	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	34	junction_2	322.502411705022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	136660239	True	NA	NA	False	AATAAA	-13	NA	136665787	136672678	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136665818_136668556_136668674_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
WTC11_00087686	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_4	56.7951362354207	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	136710808	True	NA	35	True	AATAAA	-40	NA	136712571	136724742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
WTC11_00087687	chr9	+	4117	3	FSM	ENSG00000165716.11	ENST00000371691.5	2410	3	-708	-999	-708	307	multi-exon	FALSE	canonical	3	431	junction_2	75	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTTTATTCCAGCCAG	136718413	False	NA	NA	False	NA	NA	NA	136720176	136725049	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136722029_136722124_136722302_136722961
WTC11_00087688	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	44.1616349335031	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	136787567	True	NA	12	True	AAAACA	-30	NA	136791343	136793317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
WTC11_00087691	chr9	+	863	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	-24	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	138.378782694458	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787567	True	NA	27	True	AATAAA	-19	NA	136791343	136793256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
WTC11_00087692	chr9	+	687	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	-4	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	169.305115759159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787591	True	NA	27	True	AATAAA	-19	NA	136791367	136793256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
WTC11_00087695	chr9	+	3430	7	ISM	ENSG00000196642.19_ENSG00000213213.14	ENST00000371671.9	1580	8	-501	0	-501	0	intron_retention	FALSE	canonical	3	506	junction_6	33.8427737239921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	136807337	False	NA	11	True	AATAAA	-15	NA	136807441	136834340	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264
WTC11_00087696	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	172.926786442667	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	136800249	True	NA	11	True	AATAAA	-15	NA	136807942	136834340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
WTC11_00087697	chr9	+	3700	15	FSM	ENSG00000196642.19_ENSG00000213213.14	ENST00000311502.12	3104	15	-601	5	562	0	multi-exon	FALSE	canonical	3	412	junction_9	60.3366829227664	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGTGTGTCTGTTCTT	136807242	False	NA	9	True	CATAAA	-15	NA	136807346	136841182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
WTC11_00087702	chr9	+	1316	3	FSM	ENSG00000054148.18	ENST00000492540.5	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	1676.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136849070	False	NA	4	True	ATTAAA	-13	NA	136849090	136851022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850561_136850754
WTC11_00087703	chr9	+	575	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	2	0	0	multi-exon	FALSE	canonical	3	3446	junction_2	188.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136819367	True	NA	4	True	ATTAAA	-13	NA	136849408	136851022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850138_136850754
WTC11_00087704	chr9	+	619	4	FSM	ENSG00000054148.18	ENST00000462205.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	1687.24054795594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	136819383	True	NA	6	True	ATTAAA	-15	NA	136849424	136851024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850138_136850502_136850561_136850754
WTC11_00087705	chr9	+	619	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	-1	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	1647.42472429614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	136819383	True	NA	9	True	ATTAAA	-18	NA	136849424	136851027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
WTC11_00087706	chr9	+	380	3	FSM	ENSG00000177943.14	ENST00000481327.1	380	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTGACCCACAGTGCCC	136855402	False	NA	NA	False	NA	NA	NA	136855558	136856219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136855620_136855731_136855849_136856017
WTC11_00087708	chr9	+	2278	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	-12	0	-12	0	multi-exon	TRUE	canonical	3	93	junction_1	70.7814241167836	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882767	True	NA	12	True	ATTAAA	-14	NA	136886503	136926607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
WTC11_00087711	chr9	+	6695	1	FSM	ENSG00000213590.2	ENST00000395082.2	1322	1	-6344	971	-6344	-971	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCTACTCGGGAGGCT	136929485	False	NA	NA	False	AATACA	-37	NA	136929495	136936190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136929500_136936200
WTC11_00087712	chr9	+	465	2	FSM	ENSG00000176919.13	ENST00000465773.1	457	2	-86	78	-86	47	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGGGATCTTCTGCC	136946335	False	NA	NA	False	NA	NA	NA	136946347	136946896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136946567_136946650
WTC11_00087714	chr9	+	830	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	189	junction_2	71.7139378983534	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988503	True	NA	23	True	AATAAA	-18	NA	136992399	136993976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087715	chr9	+	1108	5	NIC	ENSG00000148362.11	novel	808	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	257	junction_1	53.6720364808342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988526	True	NA	23	True	AATAAA	-18	NA	136992422	136993976	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087716	chr9	+	1176	4	NIC	ENSG00000148362.11	novel	1077	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	336	junction_3	26.1958436058513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	136988544	True	NA	31	True	AATAAA	-26	NA	136992440	136993984	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087718	chr9	+	783	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	141.824324038188	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988550	True	NA	23	True	AATAAA	-18	NA	136992446	136993976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136992563_136992639_136992705_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993769
WTC11_00087719	chr9	+	1093	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	-16	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	44.8441746495573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	136988550	True	NA	31	True	AATAAA	-26	NA	136992446	136993984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087720	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	53.8961965262856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	136988594	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087721	chr9	+	784	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	116.379288917268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGTGGGGCTCTGACT	136988554	True	NA	24	True	AATAAA	-19	NA	136992450	136993977	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136992563_136992639_136992705_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00087722	chr9	+	3349	9	FSM	ENSG00000197355.11	ENST00000409858.8	3349	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	14.396180048888	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	137076502	True	NA	28	True	AATAAA	-20	NA	137077516	137084538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137077822_137078049_137078255_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
WTC11_00087724	chr9	+	4412	4	FSM	ENSG00000197355.11	ENST00000474787.1	4412	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	137078588	False	NA	28	True	AATAAA	-20	NA	137078598	137084538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137078678_137078975_137079149_137079255_137080875_137081997
WTC11_00087725	chr9	+	2776	13	FSM	ENSG00000177239.16	ENST00000371589.9	2707	13	-115	46	0	0	multi-exon	FALSE	canonical	3	254	junction_9	25.9019250678829	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAATGGGTCTTTTCGG	137086791	True	NA	-38	True	GGGGCT	-44	NA	137086869	137109137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00087726	chr9	+	2915	14	FSM	ENSG00000177239.16	ENST00000684138.1	2891	14	-24	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	107.030438627988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTTTTCGGTGGAGATA	137086791	True	NA	-30	True	NA	NA	NA	137086869	137109145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00087727	chr9	+	2810	13	FSM	ENSG00000177239.16	ENST00000683324.1	2801	13	-9	0	4	0	multi-exon	FALSE	canonical	2	3	junction_3	85.1394281295231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATTTGCTCTAACC	137086850	False	NA	-10	True	NA	NA	NA	137086860	137109165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096239_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00087728	chr9	+	2696	13	FSM	ENSG00000177239.16	ENST00000682881.1	2698	13	0	2	0	2	multi-exon	FALSE	canonical	1	1	junction_12	84.1470274116812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCCTGTGTCTTTAG	137086846	False	NA	12	True	GATAAA	-21	NA	137086856	137109187	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108530
WTC11_00087729	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	82.8413393179999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	137086825	False	NA	0	True	GATAAA	-9	NA	137086903	137109175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
WTC11_00087733	chr9	+	7177	12	FSM	ENSG00000177239.16	ENST00000684645.1	7162	12	-15	0	0	0	multi-exon	FALSE	canonical	3	254	junction_8	24.9889231659096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCGATGTCGCCTGTGT	137082181	True	NA	6	True	GATAAA	-15	NA	137086964	137109181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00087734	chr9	+	7102	14	FSM	ENSG00000177239.16	ENST00000683979.1	7082	14	-20	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	125.815258573596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	137082181	True	NA	8	True	GATAAA	-17	NA	137086964	137109183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137105917_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00087737	chr9	+	3200	4	FSM	ENSG00000177239.16	ENST00000682502.1	3200	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	132.288405471614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGGGTCTGGAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	137104863	137108984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137106316_137106688_137106810_137107274_137107448_137107530
WTC11_00087738	chr9	+	879	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	-16	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	104	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	137177324	True	NA	9	True	AATAAA	-16	NA	137188659	137190366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137188779_137189065_137189266_137189806
WTC11_00087739	chr9	+	1189	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	1022	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177305	True	NA	13	True	AATAAA	-20	NA	137188640	137190370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137189266_137189806
WTC11_00087741	chr9	+	730	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	-7	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	380	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177363	True	NA	13	True	AATAAA	-20	NA	137188698	137190370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137188779_137189065_137189152_137189806
WTC11_00087742	chr9	+	4860	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	-43	0	-28	0	multi-exon	FALSE	canonical	3	102	junction_9	14.6767940649063	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137205644	False	NA	6	True	AATAAA	-15	NA	137205656	137219361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
WTC11_00087744	chr9	+	4982	11	NIC	ENSG00000188566.15	novel	4817	14	NA	NA	-28	0	intron_retention	FALSE	canonical	2	5	junction_3	50.8488937932773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137205644	False	NA	6	True	AATAAA	-15	NA	137205656	137219361	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137206310_137212501_137212600_137213779_137213879_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216271
WTC11_00087748	chr9	+	1296	2	FSM	ENSG00000197191.6	ENST00000409414.2	1296	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTCTTCTTTGCTGCA	137224576	False	NA	7	True	AATAAA	-20	NA	137224634	137226310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137225234_137225613
WTC11_00087750	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	88.3037686373325	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	137223252	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
WTC11_00087751	chr9	+	2540	13	FSM	ENSG00000188986.9	ENST00000343053.6	2540	13	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_8	60.8725900732195	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGGCTGAGATGTCTC	137251217	True	NA	15	True	AATAAA	-16	NA	137255326	137273542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137255612_137255906_137256071_137256328_137256429_137256823_137257055_137263036_137263223_137264244_137264358_137265876_137265980_137266330_137266427_137266943_137267087_137267239_137267347_137272080_137272223_137272506_137272616_137272781
WTC11_00087752	chr9	+	4198	2	FSM	ENSG00000198113.3	ENST00000357503.3	4171	2	-27	0	-27	0	multi-exon	TRUE	canonical	3	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTACTGTTTGGTTTGT	137277679	False	NA	14	True	AATAAA	-20	NA	137277698	137282641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137277908_137278652
WTC11_00087753	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	137525080	True	NA	18	True	ATTAAA	-16	NA	137551878	137552555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137551979_137552073
WTC11_00087755	chr9	+	563	5	FSM	ENSG00000197070.14	ENST00000431925.6	555	5	-8	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	113.05419054595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGACGGGCAGCGTGGT	137601030	True	NA	NA	False	NA	NA	NA	137605685	137614076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137613980
WTC11_00087756	chr9	+	1597	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	-42	1	-41	0	multi-exon	FALSE	canonical	3	226	junction_4	36.8776244309943	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	137600988	True	NA	11	True	AATAAA	-16	NA	137605643	137615359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
WTC11_00087760	chr9	+	3185	5	FSM	ENSG00000197070.14	ENST00000491911.5	3185	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	41.6893271713517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	137606795	False	NA	11	True	AATAAA	-16	NA	137611450	137615359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137613007_137613459_137613511_137613614_137614215_137614298_137614476_137614558
WTC11_00087762	chr9	+	5017	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	117.958677510389	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604826	True	NA	15	True	AATAAA	-20	NA	137619004	137836127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00087765	chr9	+	5061	27	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_4	89.2987887299657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604839	True	NA	15	True	AATAAA	-20	NA	137619017	137836127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00087766	chr9	+	5108	27	FSM	ENSG00000181090.21	ENST00000460843.6	5095	27	-13	0	0	0	multi-exon	TRUE	canonical	3	208	junction_4	94.5415049269164	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604813	True	NA	15	True	AATAAA	-20	NA	137618991	137836127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00087777	chr9	+	577	2	FSM	ENSG00000159247.13	ENST00000635438.1	565	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCCCTCCCACATGG	138150006	False	NA	NA	False	NA	NA	NA	138150062	138174700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_138150309_138174369
WTC11_00087780	chr9	+	2496	5	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	18.4847910456137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150030	False	NA	25	True	AATAAA	-15	NA	138150086	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_138150309_138174045_138174873_138175362_138175472_138175600_138175712_138176206
WTC11_00087781	chr9	+	3083	5	NNC	ENSG00000159247.13	novel	1735	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_1	34.9213401804684	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149458	True	NA	25	True	AATAAA	-15	NA	138150112	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_138150309_138157351_138157470_138174045_138174873_138175362_138175472_138175600
WTC11_00087783	chr9	-	3518	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	9104	-20	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	95.7171759810003	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTCTAGCTGTGCAGGA	-20620	False	NA	17	True	AATAAA	-37	NA	20635	14494	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16422_16717_16877_16964_17167_17343_17480_17718_17856_18027_18175_18380_18480_19025
WTC11_00087784	chr9	-	1965	2	NNC	ENSG00000181404.17	novel	556	4	NA	NA	261	1685	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTGCCATTC	NA	False	NA	NA	False	NA	NA	NA	29478	23206	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_25005_29311
WTC11_00087785	chr9	-	1982	15	FSM	ENSG00000172785.18	ENST00000356521.8	1706	15	42	-318	0	318	multi-exon	FALSE	canonical	3	515	junction_8	468.051829722011	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTTGACCATTGGGAAC	-173514	True	NA	NA	False	NA	NA	NA	179016	120719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
WTC11_00087786	chr9	-	1793	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	-22	0	0	multi-exon	FALSE	canonical	3	264	junction_15	533.237591406391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATGTTGACGACCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	179047	121037	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
WTC11_00087787	chr9	-	3326	6	FSM	ENSG00000172785.18	ENST00000611457.4	3324	6	0	-2	0	0	multi-exon	FALSE	canonical	3	1386	junction_1	191.678272112412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	148625	121088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101
WTC11_00087788	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	567.388401038597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	-173519	True	NA	-6	True	AATAAA	-20	NA	179021	121408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
WTC11_00087793	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_3	703.347393224398	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	-173521	True	NA	NA	False	ATTAAA	-39	NA	179023	171952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_173367_175697_175785_177722_177821_178815
WTC11_00087794	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_1	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	NA	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_173367_175697_175785_178815
WTC11_00087795	chr9	-	368	1	FSM	ENSG00000183784.7	ENST00000382387.4	2786	1	2366	52	2214	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACTACATACGAAAACAAA	-213495	False	NA	NA	False	NA	NA	NA	213527	213159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_213200_213500
WTC11_00087796	chr9	-	363	1	FSM	ENSG00000222973.1	ENST00000411041.1	191	1	-202	30	-202	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTACCTCCAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	2163155	2162792	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2162800_2163200
WTC11_00087797	chr9	-	884	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	3	0	3	0	multi-exon	FALSE	canonical	3	15	junction_3	32.124756808418	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2622338	False	NA	0	True	AATAAA	-25	NA	2622370	2535651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
WTC11_00087798	chr9	-	670	4	NNC	ENSG00000236404.12	novel	746	4	NA	NA	-428	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	35.1978534699048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTGATTTCCTTAT	-2621817	False	NA	-4	True	AATAAA	-21	NA	2621849	2535655	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2621788
WTC11_00087799	chr9	-	946	2	NNC	ENSG00000080608.10	novel	340	4	NA	NA	24772	26800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATTTTCTACGGTTTC	NA	False	NA	-5	True	AATAAA	-26	NA	2783058	2777351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_2777995_2782755
WTC11_00087800	chr9	-	2215	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	-28	0	28	multi-exon	FALSE	canonical	3	790	junction_9	49.1366993693461	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAGCATATCAGTGTGA	-2821136	True	NA	24	True	TTTAAA	-45	NA	2844095	2804123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
WTC11_00087801	chr9	-	356	1	FSM	ENSG00000236496.2	ENST00000411761.2	986	1	140	490	140	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGCAACTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	2876287	2875931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2875900_2876300
WTC11_00087802	chr9	-	2710	14	FSM	ENSG00000080298.16	ENST00000358730.6	2971	14	0	261	0	216	multi-exon	FALSE	canonical	2	14	junction_13	2.20542633643561	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAAAATGGCTTATCAA	NA	False	NA	NA	False	NA	NA	NA	3395596	3247297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471
WTC11_00087803	chr9	-	417	4	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	4120	-8300	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	4.49691252107735	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCCCATGTGTGATCC	-4662032	False	155	NA	False	AATAAA	-16	NA	4662187	4654598	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4662163
WTC11_00087804	chr9	-	249	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	3	4	3	-4	multi-exon	FALSE	canonical	3	26	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTCTAGTGAAATCC	-4679305	True	NA	-14	True	AATAAA	-11	NA	4679489	4676603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4676750_4679386
WTC11_00087805	chr9	-	527	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	-64	0	64	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGGAAATGATGTGAGA	-4679318	True	NA	NA	False	NA	NA	NA	4679502	4678754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4679166_4679386
WTC11_00087806	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	32.8176781628439	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-4738989	True	NA	-2	True	AATAAA	-21	NA	4741202	4709555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
WTC11_00087807	chr9	-	4633	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-80	956	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	93.2853686276685	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAGGGGATTTGGAAAT	-4741068	True	NA	50	True	NA	NA	NA	4741307	4711088	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727925_4740936
WTC11_00087808	chr9	-	705	4	FSM	ENSG00000147853.17	ENST00000447596.4	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	110.460651616562	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTGTGTAACTATT	-4739014	True	NA	NA	False	ACTAAA	-41	NA	4741227	4712974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4740936
WTC11_00087809	chr9	-	734	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	184	-12	184	0	3prime_fragment	FALSE	canonical	3	59	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTGTCTTTTTATTA	NA	False	NA	0	True	ATTAAA	-23	NA	5304248	5299863	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_5300445_5304095
WTC11_00087810	chr9	-	766	2	FSM	ENSG00000107018.8	ENST00000487557.2	764	2	0	-2	0	2	multi-exon	FALSE	canonical	3	15	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATACATAATAACAATACA	-5339379	True	NA	NA	False	AATAAA	-17	NA	5339396	5334966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5335598_5339261
WTC11_00087811	chr9	-	1027	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	-46	0	-46	0	multi-exon	FALSE	canonical	3	329	junction_3	41.5384159543909	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435133	True	NA	-2	True	AATAAA	-20	NA	5437971	5357970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
WTC11_00087813	chr9	-	5634	15	FSM	ENSG00000099219.15	ENST00000339450.10	5377	15	62	-319	0	308	multi-exon	TRUE	canonical	3	137	junction_5	41.5105101026185	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAGAAGTTGCCTTTC	-5830431	True	NA	NA	False	NA	NA	NA	5833055	5784252	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5805026_5805218_5805610_5805786_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
WTC11_00087814	chr9	-	4967	13	FSM	ENSG00000099219.15	ENST00000691251.1	5000	13	44	-11	0	0	multi-exon	FALSE	canonical	3	59	junction_5	59.7645844589884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTATCTTTTTAAC	-5830449	True	NA	-28	True	AATAAA	-13	NA	5833073	5784571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
WTC11_00087815	chr9	-	7579	7	FSM	ENSG00000183354.12	ENST00000381461.6	6884	7	-695	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	5.82380173655205	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	-6006287	False	2195	-18	True	AATAAA	-14	NA	6008482	5919021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5923310_5924657_5924846_5929043_5929160_5954015_5954096_5968018_5969437_5988344_5988546_6007194
WTC11_00087816	chr9	-	7680	8	FSM	ENSG00000183354.12	ENST00000399933.8	7669	8	3	-14	3	14	multi-exon	FALSE	canonical	3	5	junction_3	5.40974177964614	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTTTAACGTGTGTT	-6006284	False	2195	-4	True	AATAAA	-28	NA	6008479	5919007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5923310_5924657_5924846_5929043_5929160_5944870_5944961_5954015_5954096_5968018_5969437_5988344_5988546_6007194
WTC11_00087817	chr9	-	3507	2	FSM	ENSG00000137040.10	ENST00000623170.1	704	2	20	-2823	7	-18	multi-exon	FALSE	canonical	1	8	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTTGTTTGTACC	-6013410	True	NA	-23	True	AATAAA	-13	NA	6015605	6011042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6014357_6015412
WTC11_00087818	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1505	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-6013429	True	NA	-5	True	AATAAA	-31	NA	6015624	6011024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6011000_6015600
WTC11_00087819	chr9	-	3473	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	-2473	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-6013417	True	NA	-5	True	AATAAA	-31	NA	6015612	6011024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6014357_6015471
WTC11_00087820	chr9	-	878	3	FSM	ENSG00000178445.10	ENST00000638274.1	878	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCTTGGTGT	-6534747	False	46	-1	True	AATAAA	-17	NA	6534778	6532466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534066_6534180_6534707
WTC11_00087821	chr9	-	3859	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	0	-16	0	16	multi-exon	TRUE	canonical	0	0	junction_4	245.695833721969	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACTTTATAGTTTTACC	NA	False	NA	15	True	AATAAA	-33	NA	6645729	6532450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
WTC11_00087822	chr9	-	2678	4	FSM	ENSG00000178445.10	ENST00000639461.1	2674	4	0	-4	0	0	multi-exon	FALSE	canonical	3	1123	junction_3	110.079769056605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAGTATTCTAATAAA	-6541791	False	NA	-37	True	NA	NA	NA	6541816	6532502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050
WTC11_00087824	chr9	-	2009	9	FSM	ENSG00000178445.10	ENST00000639318.1	2009	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	402.069878876794	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTCTCCTCTT	NA	False	NA	-91	True	NA	NA	NA	6565861	6532556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353
WTC11_00087826	chr9	-	2741	16	FSM	ENSG00000178445.10	ENST00000640592.1	2828	16	90	-3	51	3	multi-exon	FALSE	canonical	3	910	junction_3	95.8733887304849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGGGAATTCTTTTT	-6629047	False	NA	2	True	AATAAA	-25	NA	6644740	6557662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613
WTC11_00087830	chr9	-	1272	1	FSM	ENSG00000230207.1	ENST00000413888.1	1276	1	54	-50	54	50	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTGAATAAAGACC	NA	False	NA	NA	False	CATAAA	-20	NA	7478266	7476994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7477000_7478300
WTC11_00087831	chr9	-	651	3	NNC	ENSG00000137038.8	novel	2456	2	NA	NA	0	54103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTCATATGT	-7788888	True	NA	NA	False	CATAAA	-45	NA	7799778	7742396	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742436_7798343_7798638_7799460
WTC11_00087832	chr9	-	1513	1	FSM	ENSG00000273056.1	ENST00000609091.1	584	1	86	-1015	86	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTTTAAATGGCATG	NA	False	NA	NA	False	AATAAA	-41	NA	7786602	7785089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7785100_7786600
WTC11_00087833	chr9	-	9542	33	NNC	ENSG00000153707.19	novel	10389	46	NA	NA	290	4422	intron_retention	FALSE	non_canonical	0	0	junction_1	12.9626491674156	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATTCAGCTGTGTTT	-8857448	False	NA	NA	False	NA	NA	NA	8857486	8309823	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_8309846_8314244_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485325_8485761_8486350_8492861_8492980_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857371
WTC11_00087837	chr9	-	275	2	Antisense	novelGene_ENSG00000227138.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10828418	10763088	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_10763305_10828359
WTC11_00087838	chr9	-	8245	47	FSM	ENSG00000107186.17	ENST00000319217.12	7821	47	0	-424	0	423	multi-exon	FALSE	canonical	3	13	junction_20	32.8292037103718	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGTTCTACTAGTT	-13277049	True	NA	12	True	AATAAA	-40	NA	13279692	13105282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
WTC11_00087839	chr9	-	7558	46	NNC	ENSG00000107186.17	novel	7821	47	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_45	24.7722066482222	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-13277049	True	NA	-12	True	AATAAA	-25	NA	13279692	13105706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279563
WTC11_00087844	chr9	-	8158	46	FSM	ENSG00000107186.17	ENST00000447879.6	6441	46	-128	-1589	0	435	multi-exon	FALSE	canonical	3	48	junction_45	24.7043156123893	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTTTGTACCAAATT	-13277049	True	NA	24	True	NA	NA	NA	13279692	13105270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
WTC11_00087845	chr9	-	2869	12	FSM	ENSG00000147862.18	ENST00000397575.7	2869	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.94250294255883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGGAAAAAAACAGT	-14313985	False	NA	NA	False	AAAAAG	-27	NA	14314069	14087571	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14088327_14102421_14102511_14112998_14113082_14116207_14116347_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
WTC11_00087846	chr9	-	1269	1	FSM	ENSG00000272871.1	ENST00000610061.1	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCCTCTGTAGATACT	NA	False	NA	2	True	AATAAA	-19	NA	14590065	14588796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14588800_14590100
WTC11_00087847	chr9	-	9122	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	-1	0	1	multi-exon	FALSE	canonical	3	37	junction_7	13.5646599662505	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTTTATCCTCTTAC	-14693319	False	NA	1	True	AATAAA	-19	NA	14693432	14611069	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
WTC11_00087849	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	-14722391	True	NA	NA	False	NA	NA	NA	14722733	14719723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14720387_14722165
WTC11_00087850	chr9	-	1731	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	-128	-605	-128	605	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACGTACATAAGAG	NA	False	NA	NA	False	AATAAA	-25	NA	14922462	14920731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14920700_14922500
WTC11_00087851	chr9	-	10422	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	61	0	61	0	multi-exon	FALSE	canonical	3	27	junction_3	6.03360854986168	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	-15307154	False	NA	-10	True	AATAAA	-16	NA	15307299	15163621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
WTC11_00087852	chr9	-	1326	7	FSM	ENSG00000155158.20	ENST00000380853.1	1326	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	15.1813116107345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTAACAGTGACCTTCA	NA	False	NA	-8	True	AATAAA	-18	NA	15188065	15171563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185529_15186943_15187036_15187970
WTC11_00087853	chr9	-	3342	16	FSM	ENSG00000164985.15	ENST00000380733.9	3342	16	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_15	439.413528340775	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	-15477266	True	NA	-38	True	ATTAAA	-17	NA	15510970	15464065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
WTC11_00087854	chr9	-	3364	16	FSM	ENSG00000164985.15	ENST00000380738.8	3364	16	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_15	303.350329194188	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	-15477291	True	NA	-38	True	ATTAAA	-17	NA	15510995	15464065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
WTC11_00087855	chr9	-	1966	11	FSM	ENSG00000164985.15	ENST00000380715.5	1966	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	727.677820192426	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	-15477287	True	NA	-4	True	AATAAA	-20	NA	15510991	15470635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15471312_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
WTC11_00087856	chr9	-	1889	11	FSM	ENSG00000164985.15	ENST00000380716.8	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	648.598828244393	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	-15477290	True	NA	-4	True	AATAAA	-20	NA	15510994	15470635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
WTC11_00087861	chr9	-	902	1	FSM	ENSG00000213362.3	ENST00000432137.1	551	1	-192	-159	-192	159	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCCCCCCCCCCCCCGCC	NA	False	NA	NA	False	AATAAA	-13	NA	15527875	15526973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15527000_15527900
WTC11_00087862	chr9	-	12808	7	FSM	ENSG00000173068.18	ENST00000380672.9	12808	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.7888840621673	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTTACCTTTCTGAT	-16870642	False	926	-1	True	ATTAAA	-18	NA	16870670	16409502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
WTC11_00087863	chr9	-	1008	4	FSM	ENSG00000173068.18	ENST00000603713.5	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	7.34846922834953	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCCAGTACATAAACCC	-16728153	False	NA	NA	False	AAAACA	-27	NA	16728165	16437224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16437525_16552529_16552766_16582982_16583086_16727796
WTC11_00087865	chr9	-	662	3	FSM	ENSG00000173068.18	ENST00000468187.6	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	-16727985	False	NA	NA	False	AATAAA	-19	NA	16727997	16579790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16580149_16582982_16583086_16727796
WTC11_00087866	chr9	-	6344	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	-21	0	21	multi-exon	TRUE	canonical	3	92	junction_2	76.3611638449153	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTCAAAAAGAACTATGC	-19094240	True	NA	17	True	AATAAA	-36	NA	19102904	19053119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
WTC11_00087868	chr9	-	680	5	FSM	ENSG00000147874.11	ENST00000415524.1	680	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	164.126475621699	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGCTGACCAGTCACA	NA	False	NA	NA	False	NA	NA	NA	19065084	19058763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19065031
WTC11_00087869	chr9	-	699	3	FSM	ENSG00000147872.10	ENST00000464326.1	790	3	0	91	0	-91	multi-exon	FALSE	canonical	3	8	junction_1	150	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGATCCTAGTTCTG	-19118422	False	NA	NA	False	NA	NA	NA	19118446	19108465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19108748_19116358_19116650_19118320
WTC11_00087870	chr9	-	1472	9	NIC	ENSG00000147872.10	novel	1897	8	NA	NA	0	-200	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	90.9586959833968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTATTACATTAAACTT	-19125191	True	NA	NA	False	AATAAA	-25	NA	19127492	19108574	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_19108748_19116358_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
WTC11_00087871	chr9	-	1913	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	-16	0	16	multi-exon	FALSE	canonical	3	238	junction_4	30.358403335176	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGTGTGTTGCTTT	-19125191	True	NA	-1	True	AATAAA	-41	NA	19127492	19115744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
WTC11_00087872	chr9	-	1887	3	FSM	ENSG00000147872.10	ENST00000472715.1	801	3	-433	-653	-431	526	multi-exon	FALSE	canonical	3	298	junction_2	3.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGATTGGCTTCT	-19127910	False	NA	NA	False	TATAAA	-22	NA	19127923	19124979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19126310_19126396_19126449_19127418
WTC11_00087873	chr9	-	764	1	FSM	ENSG00000232176.1	ENST00000397390.3	712	1	-66	14	-66	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAAAAATAAATAAGATC	NA	False	NA	NA	False	NA	NA	NA	19201112	19200348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19200300_19201100
WTC11_00087875	chr9	-	1393	1	FSM	ENSG00000272842.1	ENST00000609609.1	560	1	-97	-736	-97	736	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTATGTCCAACAAAAG	-19105177	False	NA	NA	False	NA	NA	NA	19372042	19370649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19370600_19372000
WTC11_00087876	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	23091	junction_5	2518.69100923476	8053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-19113371	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
WTC11_00087877	chr9	-	480	2	FSM	ENSG00000137154.13	ENST00000498815.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	24266	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	-19109974	False	NA	-22	True	AATAAA	-17	NA	19376839	19376254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493
WTC11_00087878	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24266	junction_1	2325.39893082886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	-19113341	True	NA	-37	True	AATAAA	-2	NA	19380206	19376269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
WTC11_00087880	chr9	-	1352	2	ISM	ENSG00000155886.12	ENST00000341998.7	10990	11	-125	278491	-125	-278491	5prime_fragment	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAAAGGTTGGTGGTGG	-19789098	False	NA	NA	False	GATAAA	-38	NA	19789162	19785945	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_19787020_19788884
WTC11_00087881	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	7.68700201639105	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	-20621841	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
WTC11_00087882	chr9	-	8259	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	12	6	12	-6	multi-exon	FALSE	canonical	3	21	junction_5	4.30761599444003	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCATATACATGTCAGAA	-21031352	True	NA	NA	False	AATAAA	-20	NA	21031628	20999514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
WTC11_00087883	chr9	-	5740	1	FSM	ENSG00000198642.7	ENST00000359039.5	5740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATGACTTTCTCTTAT	-21332357	True	NA	NA	False	AATAAA	-22	NA	21335404	21329664	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21329700_21335400
WTC11_00087884	chr9	-	906	3	FSM	ENSG00000147889.18	ENST00000304494.10	978	3	0	72	0	-72	multi-exon	FALSE	canonical	2	7	junction_2	5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCACACTGCTAGCAAA	-21974839	True	NA	NA	False	NA	NA	NA	21974857	21967823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21968243_21970901_21971209_21974677
WTC11_00087885	chr9	-	4001	7	NIC	ENSG00000107105.15	novel	3983	7	NA	NA	0	199	combination_of_known_junctions	FALSE	canonical	1	18	junction_6	50.6644736367495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCAAATACTGCTAA	-23820967	False	NA	NA	False	NA	NA	NA	23821480	23689904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
WTC11_00087886	chr9	-	3763	6	FSM	ENSG00000107105.15	ENST00000223951.10	3763	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	42.1122310024059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23820967	False	NA	-7	True	AATAAA	-17	NA	23821480	23690103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
WTC11_00087887	chr9	-	3711	6	NIC	ENSG00000107105.15	novel	3789	7	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	48.7376651061579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGTGTGGTGAGTAG	-23819895	True	NA	-9	True	AATAAA	-15	NA	23821808	23690105	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
WTC11_00087889	chr9	-	3983	7	FSM	ENSG00000107105.15	ENST00000397312.7	3983	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.1179165125163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23825727	True	NA	-7	True	AATAAA	-17	NA	23826240	23690103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
WTC11_00087890	chr9	-	4049	6	NIC	ENSG00000107105.15	novel	3983	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	41.0268204958659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23825832	True	NA	-7	True	AATAAA	-17	NA	23826345	23690103	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
WTC11_00087893	chr9	-	1339	1	Genic_Genomic	ENSG00000107105.15	novel	NA	NA	NA	NA	-642	-13634	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGAACCTCTCCATC	NA	False	NA	NA	False	NA	NA	NA	23780017	23778678	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_23778700_23780000
WTC11_00087894	chr9	-	1476	1	FSM	ENSG00000198680.6	ENST00000358022.6	1476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGGTTGCGGCGAGT	-25678431	False	NA	-11	True	AATAAA	-20	NA	25678444	25676968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_25677000_25678400
WTC11_00087895	chr9	-	2792	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	-3	0	3	multi-exon	FALSE	canonical	3	336	junction_5	31.2512399753994	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCTGTTCTACTCT	-26887913	True	NA	1	True	ATTAAA	-21	NA	26892802	26840681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
WTC11_00087896	chr9	-	2165	5	NIC	ENSG00000120159.13	novel	1532	6	NA	NA	4	-465	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	184.943741445879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGGACTTTCCTTAT	-26887711	False	NA	NA	False	AATACA	-36	NA	26892600	26841175	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_26842648_26861065_26861140_26884809_26884886_26887312_26887514_26892258
WTC11_00087900	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	40.6137820196646	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	-26941386	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
WTC11_00087901	chr9	-	4520	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	33	-93	combination_of_known_junctions	FALSE	canonical	3	184	junction_4	60.3880966931582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGTTGTATCATACATAC	-26941344	True	NA	-18	True	ATTAAA	-2	NA	26947200	26903464	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
WTC11_00087902	chr9	-	2989	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	27	890	combination_of_known_junctions	TRUE	canonical	1	4	junction_12	115.931822637272	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATTTGTCATTTAT	-26941350	True	NA	NA	False	ATTAAA	-15	NA	26947206	26904992	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935198_26946896
WTC11_00087903	chr9	-	2101	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	-60	0	60	multi-exon	FALSE	canonical	3	276	junction_3	40.4793328612131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAACTTCGGTAGTTCTA	-26941377	True	NA	62	True	ATTAAA	-5	NA	26947233	26907742	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
WTC11_00087904	chr9	-	471	3	FSM	ENSG00000137055.15	ENST00000520641.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATTTATTTACCAAG	-26919440	False	NA	NA	False	NA	NA	NA	26919461	26916455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26916706_26917096_26917166_26919309
WTC11_00087906	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	9.62635271879577	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-27525397	True	NA	-2	True	AATAAA	-17	NA	27529814	27325208	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
WTC11_00087907	chr9	-	3232	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	-1	0	1	multi-exon	FALSE	canonical	3	138	junction_10	25.7699437329615	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTCAGTTGTTCATTC	-27571787	True	NA	-1	True	AATAAA	-18	NA	27573481	27546544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
WTC11_00087908	chr9	-	4909	10	FSM	ENSG00000147894.17	ENST00000488117.5	4808	10	-92	-9	-46	0	multi-exon	FALSE	canonical	3	138	junction_9	22.828399034298	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-27573454	False	NA	-2	True	AATAAA	-17	NA	27573540	27546545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
WTC11_00087909	chr9	-	3264	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	75	-1	28	1	multi-exon	FALSE	canonical	2	13	junction_10	58.2480900974444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTCAGTTGTTCATTC	NA	False	NA	-1	True	AATAAA	-18	NA	27573791	27546544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
WTC11_00087910	chr9	-	756	1	FSM	ENSG00000232060.3	ENST00000419995.2	602	1	130	-284	130	284	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACAATCTTATTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	30559351	30558595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_30558600_30559400
WTC11_00087911	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	28.535899808043	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-32525534	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
WTC11_00087913	chr9	-	4916	20	FSM	ENSG00000288684.1	ENST00000681750.1	4906	20	0	-10	0	10	multi-exon	FALSE	canonical	1	4	junction_19	30.0211375211024	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAATGACCCAGTCTC	-32550320	True	NA	NA	False	NA	NA	NA	32552568	32455312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32550773_32550969_32551364_32551470_32552433
WTC11_00087915	chr9	-	1186	6	FSM	ENSG00000107201.11	ENST00000681448.1	4635	6	0	3449	0	-3449	multi-exon	FALSE	canonical	3	16	junction_1	37.585103432078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATAAATCTCATATTT	NA	False	NA	NA	False	NA	NA	NA	32491697	32485174	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300
WTC11_00087916	chr9	-	637	5	NNC	ENSG00000165264.11	novel	1361	4	NA	NA	0	23131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1268.56698187364	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGTTCCAGCAGTGAT	-32560374	True	NA	NA	False	NA	NA	NA	32573159	32529869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32529909_32553763_32553945_32558909_32558955_32570959_32571053_32572880
WTC11_00087917	chr9	-	710	5	NNC	ENSG00000165264.11	novel	1361	4	NA	NA	0	23131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1268.56698187364	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGTTCCAGCAGTGAT	-32560374	True	NA	NA	False	NA	NA	NA	32573159	32529869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32529906_32553687_32553945_32558909_32558955_32570959_32571053_32572880
WTC11_00087918	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	24.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	-32550338	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32544327_32550773_32550969_32552433
WTC11_00087919	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2698	junction_1	181.715895470558	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-32560374	True	NA	NA	False	AATAAA	-14	NA	32573159	32553000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
WTC11_00087920	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1302.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-32560399	True	NA	-11	True	AATAAA	-8	NA	32573184	32553532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32558909_32558955_32572880
WTC11_00087921	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1483.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-32560374	True	NA	22	True	NA	NA	NA	32573159	32553650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32570959_32571053_32572880
WTC11_00087922	chr9	-	275	1	FSM	ENSG00000232303.2	ENST00000433250.2	979	1	612	92	612	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCACCCACAAAACCAGC	-32553729	False	NA	NA	False	NA	NA	NA	32566514	32566239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32566200_32566500
WTC11_00087923	chr9	-	2051	9	NNC	ENSG00000137074.20	novel	1977	8	NA	NA	0	127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.975124103639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGATCTTGGGCAAGTT	-32997722	True	NA	NA	False	NA	NA	NA	33001607	32971322	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32971423_32972615_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33001566
WTC11_00087924	chr9	-	2729	6	FSM	ENSG00000137074.20	ENST00000672244.1	2728	6	0	-1	0	1	multi-exon	FALSE	canonical	3	35	junction_4	125.187219794993	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGACAGAGTGAGACCCC	-32997717	True	NA	NA	False	NA	NA	NA	33001602	32971448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32989758_32989896_33001566
WTC11_00087925	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.751063318299	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-32997743	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
WTC11_00087926	chr9	-	2329	6	FSM	ENSG00000137074.20	ENST00000673333.1	2178	6	-140	-11	-115	0	multi-exon	FALSE	canonical	0	0	junction_5	132.975787269713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32988659	False	NA	-9	True	AATAAA	-14	NA	32988680	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082
WTC11_00087928	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.262074932528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997743	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
WTC11_00087929	chr9	-	1747	6	FSM	ENSG00000137074.20	ENST00000673171.1	1759	6	14	-2	14	0	multi-exon	FALSE	canonical	3	54	junction_2	113.141327550988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	32990074	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32988082_32988125_32989758
WTC11_00087930	chr9	-	1993	7	FSM	ENSG00000137074.20	ENST00000673211.1	1991	7	0	-2	0	0	multi-exon	FALSE	canonical	3	94	junction_5	96.6880723426284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	32990088	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758
WTC11_00087932	chr9	-	1966	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_5	142.285413478996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997728	True	NA	-9	True	AATAAA	-14	NA	33001613	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
WTC11_00087934	chr9	-	2122	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	-21	0	0	multi-exon	FALSE	canonical	3	19	junction_7	123.716100283624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-33024080	True	NA	-9	True	AATAAA	-14	NA	33025130	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
WTC11_00087936	chr9	-	2022	8	FSM	ENSG00000137074.20	ENST00000483148.6	2022	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	121.435461989369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	-32997702	True	NA	-42	True	AAAAAG	-20	NA	33001587	32972648	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001332
WTC11_00087937	chr9	-	1956	8	NIC	ENSG00000137074.20	novel	3202	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	118.425211050033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTATTCAGTTGTTTTT	-32997728	True	NA	-10	True	AATAAA	-13	NA	33001613	32972616	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33001566
WTC11_00087941	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	138.950130942324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	-32997710	True	NA	44	True	NA	NA	NA	33001595	32972706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
WTC11_00087947	chr9	-	1055	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	13	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	112.724837054169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997743	True	NA	-7	True	ATTAAA	-21	NA	33001628	32973375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
WTC11_00087951	chr9	-	1034	1	FSM	ENSG00000236184.1	ENST00000415066.1	844	1	-34	-156	-34	156	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAATACTACACAGCCA	-32980416	False	NA	NA	False	AAGAAA	-18	NA	32980437	32979403	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32979400_32980400
WTC11_00087960	chr9	-	7050	12	FSM	ENSG00000122692.9	ENST00000397149.4	7136	12	0	86	0	-86	multi-exon	FALSE	canonical	3	498	junction_6	41.720042946659	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTATTTCATTTAG	-33058076	True	NA	-1	True	NA	NA	NA	33076674	33041850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33047392_33048105_33048259_33053122_33053291_33056112_33056240_33056836_33056965_33057597_33057715_33060464_33060585_33062048_33062178_33068823_33068935_33071739_33071893_33073595_33073807_33076582
WTC11_00087961	chr9	-	4181	6	FSM	ENSG00000086062.13	ENST00000379731.5	4176	6	0	-5	0	5	multi-exon	FALSE	canonical	3	43	junction_4	7.66811580507233	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTCTGTTTGCCAGG	-33165841	True	NA	0	True	AATAAA	-23	NA	33167336	33110636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33113587_33113773_33113879_33115990_33116114_33120418_33120607_33135188_33135425_33166757
WTC11_00087962	chr9	-	3868	7	FSM	ENSG00000107262.26	ENST00000634734.3	3820	7	-71	23	-59	-23	multi-exon	FALSE	canonical	3	445	junction_6	25.4389246802786	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAATATTTGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	33264779	33252493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
WTC11_00087963	chr9	-	3956	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	15	-2575	0	-3	multi-exon	TRUE	canonical	3	20	junction_6	207.086888990676	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATGTTGAATGCACA	-33258283	True	NA	NA	False	AATAAA	-13	NA	33264705	33252473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
WTC11_00087964	chr9	-	680	4	FSM	ENSG00000107262.26	ENST00000473781.1	681	4	0	1	0	-1	multi-exon	FALSE	canonical	3	16	junction_3	210.97287872036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCTCTTCATGGACCT	-33258137	False	NA	NA	False	AATAAA	-22	NA	33264559	33258919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33259034_33261086_33261170_33262701_33262831_33264205
WTC11_00087966	chr9	-	1827	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	-2	0	-2	multi-exon	FALSE	canonical	2	10	junction_4	2.33238075793812	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTTGTGCAAATATCTT	-33447118	True	NA	-11	True	AATAAA	-21	NA	33447593	33441157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
WTC11_00087967	chr9	-	301	2	FSM	ENSG00000165272.16	ENST00000493581.1	2911	2	0	2610	0	-901	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTTAACCCTGCCC	-33447121	True	NA	NA	False	NA	NA	NA	33447596	33443765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33443893_33447422
WTC11_00087968	chr9	-	4857	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	-23	0	23	multi-exon	TRUE	canonical	3	121	junction_19	19.2210717703254	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTACAGTGCTTTGCTCA	-33468904	True	NA	22	True	NA	NA	NA	33473924	33461329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
WTC11_00087969	chr9	-	452	1	FSM	ENSG00000204982.3	ENST00000453323.1	162	1	98	-388	98	388	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAAGGACAGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	33613911	33613459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33613500_33613900
WTC11_00087970	chr9	-	3984	1	FSM	ENSG00000237984.3	ENST00000532280.1	3996	1	10	2	10	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTATTTTATTTTT	-33677440	True	NA	NA	False	AATAAA	-24	NA	33677489	33673505	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33673500_33677500
WTC11_00087971	chr9	-	2547	14	NNC	ENSG00000137073.24	novel	3303	20	NA	NA	-15	24670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.5834581704866	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCACAGAAGTATGCTAC	-33934334	False	NA	NA	False	NA	NA	NA	33934369	33897022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_33897055_33921695_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33934053
WTC11_00087972	chr9	-	3888	26	NIC	ENSG00000137073.24	novel	4275	29	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	76.0159562197306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATGGTCTCTGTGTGGT	-34043820	True	NA	-10	True	AATAAA	-12	NA	34048872	33921695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33998786_33998865_34017049_34017190_34048824
WTC11_00087973	chr9	-	4274	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	1	0	-1	multi-exon	FALSE	canonical	3	182	junction_21	38.6693861933627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGTCTCTGTGTGGTGT	-34043835	True	NA	-8	True	AATAAA	-14	NA	34048887	33921693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
WTC11_00087974	chr9	-	2532	11	FSM	ENSG00000137073.24	ENST00000682949.1	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_9	17.3461811359158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	-33933786	False	NA	-22	True	NA	NA	NA	33933821	33921707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489
WTC11_00087976	chr9	-	4437	29	FSM	ENSG00000137073.24	ENST00000682239.1	4437	29	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_28	57.9550648417921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	-34049340	True	NA	-22	True	NA	NA	NA	34049388	33921707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34049148
WTC11_00087979	chr9	-	3460	25	FSM	ENSG00000137073.24	ENST00000629575.2	3460	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	81.8883788899391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGGCTGTTTGGGTAT	-34043835	True	NA	-67	True	NA	NA	NA	34048887	33922140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34048824
WTC11_00087983	chr9	-	3597	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	-5	0	5	multi-exon	FALSE	canonical	3	200	junction_7	23.576670142325	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGAGTATTGTGTA	-34123481	True	NA	2	True	AATAAA	-21	NA	34126698	34086381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
WTC11_00087984	chr9	-	5730	9	FSM	ENSG00000186638.17	ENST00000379174.7	5729	9	0	-1	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.11951543294907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	NA	False	NA	NA	False	AATACA	-21	NA	34311371	34252379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34306251_34306442_34310723
WTC11_00087985	chr9	-	5698	10	NIC	ENSG00000186638.17	novel	6295	13	NA	NA	16	-147	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	6.91214711777591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATACCTTTTAGATTTTT	-34328402	True	NA	-5	True	AATAAA	-17	NA	34329221	34252527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34306251_34306442_34310723_34311372_34329105
WTC11_00087986	chr9	-	6295	13	FSM	ENSG00000186638.17	ENST00000402558.7	6295	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	3.83966867783609	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	-34328449	True	NA	NA	False	AATACA	-21	NA	34329268	34252379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34286616_34286705_34290173_34290390_34297016_34297115_34306251_34306442_34310723_34311372_34329105
WTC11_00087987	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-34375836	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34373007_34376792
WTC11_00087989	chr9	-	691	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	19	2	19	-2	multi-exon	FALSE	canonical	2	6	junction_2	11.2644968324772	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGCCTCCTGTGTCCT	-34381427	True	NA	0	True	AATAAA	-18	NA	34381581	34379020	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
WTC11_00087990	chr9	-	3611	6	FSM	ENSG00000164970.15	ENST00000297620.8	3588	6	0	-23	0	17	multi-exon	FALSE	canonical	3	50	junction_4	14.1901374200534	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGGGCAAGGGGCAG	-34456729	True	NA	NA	False	ATTAAA	-34	NA	34458570	34398166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
WTC11_00087991	chr9	-	3618	6	FSM	ENSG00000164970.15	ENST00000379089.5	3624	6	0	6	0	0	multi-exon	FALSE	canonical	3	25	junction_4	25.5702952661873	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTCAGCTCCCTC	-34456711	True	NA	NA	False	ATTAAA	-11	NA	34458552	34398189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
WTC11_00087992	chr9	-	3606	6	FSM	ENSG00000164970.15	ENST00000379087.5	3573	6	0	-33	0	33	multi-exon	FALSE	canonical	3	32	junction_1	20.7325830518052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGGGCTGGGAAGCAG	-34456711	True	NA	NA	False	NA	NA	NA	34458552	34398150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
WTC11_00087993	chr9	-	3662	6	FSM	ENSG00000164970.15	ENST00000651358.1	3645	6	0	-17	0	17	multi-exon	FALSE	canonical	3	25	junction_4	22.2117086240568	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGGGCAAGGGGCAG	-34456729	True	NA	NA	False	ATTAAA	-34	NA	34458570	34398166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
WTC11_00087994	chr9	-	1030	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	-2	0	2	multi-exon	FALSE	canonical	3	351	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGTTTTCTTCTCTTCC	-34521325	True	NA	-3	True	AATAAA	-19	NA	34522990	34521040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34521857_34522776
WTC11_00087995	chr9	-	1950	9	FSM	ENSG00000122756.15	ENST00000351266.8	1910	9	-36	-4	-18	4	multi-exon	FALSE	canonical	3	13	junction_8	20.5635448062828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACAGACCCACTTTGGG	-34588806	True	NA	3	True	ATTAAA	-22	NA	34589742	34551427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34589554
WTC11_00087996	chr9	-	2043	10	FSM	ENSG00000122756.15	ENST00000378980.8	2038	10	0	-5	0	4	multi-exon	TRUE	canonical	3	33	junction_9	15.4568295664704	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACAGACCCACTTTGGG	-34588788	True	NA	3	True	ATTAAA	-22	NA	34589724	34551427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34581094_34581206_34589554
WTC11_00087997	chr9	-	882	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	-10	0	1	multi-exon	FALSE	canonical	3	176	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTGCTATGTGGAGT	-34608407	False	3690	0	True	AATAAA	-27	NA	34612097	34610484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34611333_34612063
WTC11_00087998	chr9	-	1106	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	-16	2	-16	-2	multi-exon	FALSE	canonical	3	71	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCAGCCTGCTATGTGG	-34608430	False	3690	-3	True	AATAAA	-24	NA	34612120	34610487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34611333_34611859
WTC11_00087999	chr9	-	905	7	FSM	ENSG00000137100.16	ENST00000341694.6	899	7	0	-6	0	0	multi-exon	TRUE	canonical	2	3	junction_2	101.725802473556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGCTGGCTTCTTGGT	-34616784	True	NA	2	True	AATAAA	-19	NA	34620474	34613544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34613872_34614041_34614199_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
WTC11_00088000	chr9	-	829	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	-1	0	0	multi-exon	FALSE	canonical	3	251	junction_6	12.495554765151	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGCTGGCTTCTTGGT	-34616805	True	NA	2	True	AATAAA	-19	NA	34620495	34613544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
WTC11_00088002	chr9	-	1747	3	FSM	ENSG00000147955.18	ENST00000378892.5	1743	3	0	-4	0	4	multi-exon	TRUE	canonical	3	1026	junction_2	68	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTCTGAGCAGCCG	-34628314	True	NA	-12	True	AATAAA	-24	NA	34637732	34634717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637090_34637219
WTC11_00088003	chr9	-	1586	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	-4	0	4	multi-exon	FALSE	canonical	3	51	junction_2	593.95529199502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTCTGAGCAGCCG	-34628326	True	NA	-12	True	AATAAA	-24	NA	34637744	34634717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
WTC11_00088004	chr9	-	1676	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	-4	0	4	multi-exon	FALSE	canonical	3	1026	junction_2	163.399986400108	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTCTGAGCAGCCG	-34628369	True	NA	-12	True	AATAAA	-24	NA	34637787	34634717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
WTC11_00088005	chr9	-	1863	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	-21	0	4	multi-exon	FALSE	canonical	3	1162	junction_1	129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTCTGAGCAGCCG	NA	False	NA	-12	True	AATAAA	-24	NA	34637844	34634717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637421_34637546
WTC11_00088007	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	581.764175208095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	-34628375	True	NA	NA	False	NA	NA	NA	34637793	34635317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
WTC11_00088008	chr9	-	992	3	FSM	ENSG00000147955.18	ENST00000477726.1	840	3	13	-165	0	0	multi-exon	FALSE	canonical	3	52	junction_1	684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	-34628378	True	NA	NA	False	NA	NA	NA	34637796	34635317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34637219_34637421_34637546
WTC11_00088012	chr9	-	1521	3	FSM	ENSG00000187186.15	ENST00000421828.7	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	7.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTATGACAAGCCCGAG	-34664427	True	NA	NA	False	NA	NA	NA	34666045	34664162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665191_34665313_34665374_34665612
WTC11_00088013	chr9	-	348	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	-10	0	0	multi-exon	FALSE	canonical	3	166	junction_3	30.092450142113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTGACCTCCTGACTCT	-34664410	True	NA	-7	True	ATTAAA	-20	NA	34666028	34665021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
WTC11_00088014	chr9	-	471	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	-6	0	0	multi-exon	FALSE	canonical	3	166	junction_2	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTGACCTCCTGACTCT	-34664410	True	NA	-7	True	ATTAAA	-20	NA	34666028	34665021	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665374_34665612_34665681_34665977
WTC11_00088015	chr9	-	276	1	FSM	ENSG00000215199.3	ENST00000399764.3	738	1	541	-79	541	79	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTACAATTTATGACAG	NA	False	NA	NA	False	NA	NA	NA	34922380	34922104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34922100_34922400
WTC11_00088016	chr9	-	2193	1	FSM	ENSG00000273597.1	ENST00000621125.1	1653	1	-41	-499	-41	499	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTACTATCTTGACTTT	NA	False	NA	NA	False	NA	NA	NA	35003035	35000842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35000800_35003000
WTC11_00088017	chr9	-	329	1	FSM	ENSG00000279608.1	ENST00000624351.1	5702	1	3173	2200	3173	-2200	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATATATATGCTTAG	NA	False	NA	NA	False	ATTAAA	-2	NA	35041153	35040824	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35040800_35041200
WTC11_00088018	chr9	-	4598	16	FSM	ENSG00000165280.18	ENST00000679902.1	6033	16	0	1435	0	13	multi-exon	FALSE	canonical	2	2023	junction_2	220.377514481149	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAAAACAGATGTC	-35031176	True	NA	NA	False	NA	NA	NA	35072623	35055362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088019	chr9	-	4464	17	FSM	ENSG00000165280.18	ENST00000678465.1	4451	17	0	-13	0	13	multi-exon	FALSE	canonical	2	32	junction_9	689.451296208623	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAAAACAGATGTC	-35031178	True	NA	NA	False	NA	NA	NA	35072625	35055362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062156_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088020	chr9	-	3746	17	FSM	ENSG00000165280.18	ENST00000358901.11	3746	17	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_3	239.2966255508	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	-35031178	True	NA	-11	True	ATTAAA	-28	NA	35072625	35056063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088021	chr9	-	3849	17	FSM	ENSG00000165280.18	ENST00000448530.6	3849	17	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_16	688.882519011769	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	-35031221	True	NA	-11	True	ATTAAA	-28	NA	35072668	35056063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072276
WTC11_00088022	chr9	-	3382	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_16	692.294055003905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAACGTTGGGTCAAA	-35069327	False	NA	-40	True	NA	NA	NA	35072205	35056587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
WTC11_00088024	chr9	-	3172	17	FSM	ENSG00000165280.18	ENST00000679862.1	3159	17	0	-13	0	0	multi-exon	FALSE	canonical	1	25	junction_2	684.583860823493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAACCAAAAAATGAC	-35031164	True	NA	40	True	NA	NA	NA	35072611	35056620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057528_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088025	chr9	-	5506	14	FSM	ENSG00000165280.18	ENST00000679599.1	5506	14	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_2	252.487131314231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAACCAAAAAATGAC	-35031176	True	NA	40	True	NA	NA	NA	35072623	35056620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35059220_35059492_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088026	chr9	-	4691	16	FSM	ENSG00000165280.18	ENST00000681690.1	4691	16	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_2	239.78403245884	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAATGTTGGAAAACTA	-35031178	True	NA	9	True	NA	NA	NA	35072625	35056651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
WTC11_00088031	chr9	-	1278	11	NNC	ENSG00000165283.16	novel	1365	10	NA	NA	0	28483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.610031551255	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCAGCCCAAGGAAACT	-35077512	True	NA	NA	False	AATAGA	-45	NA	35103131	35071292	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35071323_35099894_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
WTC11_00088032	chr9	-	2128	13	FSM	ENSG00000221829.10	ENST00000425676.5	2108	13	0	-20	0	20	multi-exon	FALSE	canonical	3	19	junction_10	80.5403625519528	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGGGAAGGCTTGTGAC	-35076815	False	2878	-16	True	AGTAAA	-37	NA	35079693	35073814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440
WTC11_00088033	chr9	-	2352	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	65.1555438773953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	-35077051	False	NA	-36	True	AGTAAA	-17	NA	35079929	35073834	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
WTC11_00088034	chr9	-	2560	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	-4	0	0	multi-exon	FALSE	canonical	3	166	junction_5	42.1925706464003	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	-35077064	True	NA	-36	True	AGTAAA	-17	NA	35079942	35073834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
WTC11_00088038	chr9	-	3720	13	FSM	ENSG00000165282.14	ENST00000298004.9	2588	13	-399	-733	-18	733	multi-exon	FALSE	canonical	3	15	junction_12	45.6145535986049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTTTAGCTGGCATAAA	-35096609	False	NA	NA	False	AAAACA	-30	NA	35096619	35087954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
WTC11_00088040	chr9	-	4112	11	FSM	ENSG00000165282.14	ENST00000378617.4	4112	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	39.9399549323732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	-35096581	False	25619	NA	False	AATAAA	-16	NA	35096591	35088687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
WTC11_00088044	chr9	-	1344	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	21	0	-21	multi-exon	FALSE	canonical	3	1498	junction_9	210.517058925792	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTCTTGTAAAGTGAA	-35077512	True	NA	92	True	NA	NA	NA	35103131	35099798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
WTC11_00088045	chr9	-	1270	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	23	0	-21	multi-exon	FALSE	canonical	3	59	junction_8	648.143104858024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTCTTGTAAAGTGAA	-35103108	False	NA	92	True	NA	NA	NA	35103195	35099798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
WTC11_00088046	chr9	-	1244	9	FSM	ENSG00000165283.16	ENST00000452248.6	1296	9	0	52	0	-50	multi-exon	TRUE	canonical	3	117	junction_4	630.949965825342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCATGATGCCTCCAT	-35103108	False	NA	63	True	AATGAA	-39	NA	35103195	35099827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
WTC11_00088048	chr9	-	3156	9	FSM	ENSG00000005238.20	ENST00000378557.1	3070	9	-61	-25	-61	0	multi-exon	FALSE	canonical	1	1	junction_8	8.82379595185655	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	-35111035	False	NA	-5	True	AATAAA	-25	NA	35111484	35104116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35111268
WTC11_00088049	chr9	-	3096	9	NNC	ENSG00000005238.20	novel	2566	10	NA	NA	5	2	intron_retention	TRUE	canonical	1	3	junction_2	8.23008961069076	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTTTGTTGTTGTTGT	-35115396	True	NA	-3	True	AATAAA	-27	NA	35115845	35104114	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35105375_35105681_35105837_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
WTC11_00088050	chr9	-	2563	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	3	0	2	multi-exon	FALSE	canonical	3	3	junction_7	7.94114150453584	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTTTGTTGTTGTTGT	-35115401	True	NA	-3	True	AATAAA	-27	NA	35115850	35104114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
WTC11_00088053	chr9	-	1234	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	-12	0	12	multi-exon	FALSE	canonical	3	43	junction_4	7.34846922834953	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAAGGCTGAAGACTTG	-35648164	False	2767	1	True	AATAAA	-28	NA	35650931	35649282	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
WTC11_00088054	chr9	-	1319	4	NIC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	-8	intron_retention	FALSE	canonical	3	43	junction_3	8.37987005998436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAGATTTTTA	-35648183	False	2767	-19	True	AATAAA	-8	NA	35650950	35649302	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35650082_35650183_35650246_35650356_35650638_35650753
WTC11_00088055	chr9	-	3216	10	NIC	ENSG00000137135.18	novel	4498	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_1	63.1488541287788	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	-35662373	True	NA	-2	True	NA	NA	NA	35665187	35658876	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35659174_35660093_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00088056	chr9	-	2862	8	FSM	ENSG00000137135.18	ENST00000475323.5	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	107.40805275173	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	-35662378	True	NA	-2	True	NA	NA	NA	35665192	35658876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35659174_35660093_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00088057	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	23.7562491778479	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	-35662381	True	NA	0	True	ATTAAA	-18	NA	35665195	35659342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00088058	chr9	-	1270	7	FSM	ENSG00000137135.18	ENST00000490970.5	1270	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	120.246506070747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTATTTTTATGTTGTG	-35662373	True	NA	-18	True	NA	NA	NA	35665187	35661518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35663321_35663393_35664007_35664127_35664371_35664493_35665031
WTC11_00088059	chr9	-	739	4	FSM	ENSG00000137135.18	ENST00000468876.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	10.2740233382816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGGGCTGACCTCA	-35662014	False	NA	NA	False	NA	NA	NA	35664828	35662966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35663393_35664007_35664127_35664371_35664493_35664755
WTC11_00088060	chr9	-	1183	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	-1	0	0	multi-exon	FALSE	canonical	3	216	junction_3	172.649029826408	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTTGGCAATGGAG	-35690037	False	NA	1	True	AATAAA	-39	NA	35690056	35681991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00088061	chr9	-	1034	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	-16	0	-5	multi-exon	FALSE	canonical	3	338	junction_4	112.665364575809	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTTTGGTGTTGGCA	-35676452	True	NA	-5	True	AATAAA	-33	NA	35689913	35681997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00088062	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	199.280228259103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	-35676464	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00088063	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	-5	0	0	multi-exon	FALSE	canonical	3	46	junction_1	223.560953656939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	-35676464	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00088064	chr9	-	1363	7	FSM	ENSG00000198467.16	ENST00000471212.5	1363	7	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_2	130.927460832325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGTAAAAGAAGCCTTT	-35676439	True	NA	NA	False	NA	NA	NA	35689900	35684250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35684316_35684487_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00088066	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_48	46.8515859890984	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	-35728601	True	NA	NA	False	NA	NA	NA	35732195	35696947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
WTC11_00088067	chr9	-	446	3	FSM	ENSG00000137076.21	ENST00000466916.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGAGTCTGGGGCA	-35704183	False	NA	NA	False	NA	NA	NA	35704193	35703559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35703677_35703774_35703901_35703990
WTC11_00088068	chr9	-	543	2	FSM	ENSG00000137076.21	ENST00000465002.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCAAGGTTGGAGAGAAT	-35704404	True	NA	NA	False	NA	NA	NA	35704415	35703782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35703901_35703990
WTC11_00088069	chr9	-	370	2	FSM	ENSG00000137076.21	ENST00000495712.1	370	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGGTGAGGCGATGT	-35707957	False	NA	NA	False	NA	NA	NA	35707967	35707355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35707489_35707730
WTC11_00088070	chr9	-	830	2	NNC	ENSG00000137076.21	novel	8623	57	NA	NA	-374	-5961	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGATCACTATTGTTTT	-35732559	False	NA	-23	True	AATAAA	-1	NA	35732569	35729064	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35729400_35732074
WTC11_00088071	chr9	-	3963	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	-352	0	352	multi-exon	TRUE	canonical	3	244	junction_14	79.6193090587955	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTCTGAGCCGTCCA	-35744769	True	NA	NA	False	NA	NA	NA	35749228	35736513	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
WTC11_00088072	chr9	-	1672	2	FSM	ENSG00000070610.14	ENST00000378088.1	1672	2	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGGTGTGTTTGA	-35738625	False	NA	-5	True	AATAAA	-15	NA	35738635	35736866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35737940_35738036
WTC11_00088073	chr9	-	3136	16	NIC	ENSG00000070610.14	novel	3611	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_13	98.1097797820833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGGTGTGTTTGA	-35748919	False	NA	-5	True	AATAAA	-15	NA	35748973	35736866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35744296_35744413_35744614_35744707_35748345
WTC11_00088078	chr9	-	650	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	-1	0	1	multi-exon	FALSE	canonical	3	430	junction_4	10.7092249953019	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	-35813010	True	NA	1	True	AATAAA	-17	NA	35815042	35812958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
WTC11_00088079	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	177.27291812344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815342	False	NA	0	True	AATAAA	-16	NA	35815354	35812959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
WTC11_00088080	chr9	-	2168	3	FSM	ENSG00000137133.11	ENST00000474908.5	2167	3	0	-1	0	1	multi-exon	FALSE	canonical	3	447	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	-35815340	False	NA	1	True	AATAAA	-17	NA	35815352	35812958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444
WTC11_00088082	chr9	-	718	1	FSM	ENSG00000213866.3	ENST00000444752.1	975	1	97	160	97	-160	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAGCAGCCACCTCAAC	NA	False	NA	NA	False	GATAAA	-24	NA	35972221	35971503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35971500_35972200
WTC11_00088084	chr9	-	5113	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	0	-9	0	1	multi-exon	FALSE	canonical	3	33	junction_10	37.7201537642677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCATGTCACTGT	-36400694	False	NA	0	True	AATAAA	-26	NA	36400923	36336394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
WTC11_00088085	chr9	-	5216	12	FSM	ENSG00000137075.18	ENST00000357058.7	5254	12	44	-6	-7	-2	multi-exon	FALSE	canonical	3	10	junction_11	49.633200032383	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTGTTTCATGTCAC	-36399675	True	NA	-3	True	AATAAA	-23	NA	36400879	36336397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36400553
WTC11_00088087	chr9	-	5288	13	NIC	ENSG00000137075.18	novel	5185	13	NA	NA	-89	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	47.5937670989245	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTTGTGTTTCATGT	-36483986	True	NA	-6	True	AATAAA	-20	NA	36487637	36336400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36424612_36424684_36487307
WTC11_00088088	chr9	-	4404	1	ISM	ENSG00000168795.5	ENST00000307750.5	4690	2	22945	0	22945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	NA	False	NA	0	True	AATAAA	-27	NA	37442505	37438101	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_37438100_37442500
WTC11_00088089	chr9	-	4710	11	FSM	ENSG00000147912.13	ENST00000432825.7	4702	11	13	-21	13	21	multi-exon	FALSE	canonical	3	27	junction_1	7.60591874792257	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGCATATACTGGGGCT	-37575244	True	NA	22	True	AATAAA	-44	NA	37576367	37510870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37576210
WTC11_00088091	chr9	-	368	3	FSM	ENSG00000147912.13	ENST00000544208.1	351	3	0	-17	0	17	multi-exon	FALSE	canonical	2	3	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATGCATGATCACATT	NA	False	NA	NA	False	AATAAA	-32	NA	37525157	37522329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37522489_37522824_37522978_37525101
WTC11_00088093	chr9	-	6024	1	Genic_Genomic	ENSG00000175768.13	novel	NA	NA	NA	NA	5014	1214	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATGATACAAAATACATA	-37578433	False	NA	72	True	AATACA	-12	NA	37587455	37581431	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_37581400_37587500
WTC11_00088094	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4980	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592411
WTC11_00088095	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592309
WTC11_00088096	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-37583582	True	NA	54	True	NA	NA	NA	37592604	37588457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592290
WTC11_00088098	chr9	-	302	1	FSM	ENSG00000233111.1	ENST00000409159.2	606	1	112	192	112	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTCTTTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	37637181	37636879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37636900_37637200
WTC11_00088099	chr9	-	1073	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	740	0	134	multi-exon	FALSE	canonical	3	536	junction_2	88.2660120821649	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGGTTTATTTGGAGTT	-37770704	True	NA	-1	True	AATAAA	-18	NA	37785064	37780453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
WTC11_00088100	chr9	-	1023	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	-104	-151	-104	132	multi-exon	FALSE	canonical	3	183	junction_1	279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAGGGTTTATTTGGAG	NA	False	NA	-3	True	AATAAA	-16	NA	37785168	37780455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37780881_37783913_37784064_37784720
WTC11_00088101	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	102.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	-37770385	False	NA	NA	False	AATATA	-19	NA	37784745	37780059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37782138_37783913_37784064_37784720
WTC11_00088102	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.54606056566195	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	-37904090	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
WTC11_00088103	chr9	-	1496	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTGGTCTTCTCTTA	NA	False	NA	-5	True	AATAAA	-19	NA	37883388	37881892	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_37881900_37883400
WTC11_00088104	chr9	-	1689	3	FSM	ENSG00000122696.14	ENST00000377716.6	1691	3	0	2	0	-2	multi-exon	FALSE	canonical	3	11	junction_2	3.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCAGTTTGGCCTCTTTT	-37902503	True	NA	-5	True	AATAGA	-13	NA	37904110	37887605	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37888593_37899828_37899951_37903530
WTC11_00088105	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-37902520	True	NA	-3	True	AATAGA	-15	NA	37904127	37887603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37888593_37899828_37899951_37904067
WTC11_00088106	chr9	-	6018	6	FSM	ENSG00000107338.10	ENST00000377707.4	6035	6	0	17	0	-17	multi-exon	FALSE	canonical	3	62	junction_5	8.53229160308062	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTCTTGTTTACCA	-38067651	True	NA	-22	True	AATATA	-2	NA	38069227	37915914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37920005_37948634_37948755_37955882_37956055_37974621_37974838_38016010_38016132_38067928
WTC11_00088107	chr9	-	1729	1	Genic_Genomic	ENSG00000137142.5	novel	NA	NA	NA	NA	16201	3	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTCTTTGTTGTA	-38408231	False	NA	-2	True	AATAAA	-18	NA	38408253	38406524	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_38406500_38408300
WTC11_00088108	chr9	-	3569	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	-3	0	3	multi-exon	FALSE	canonical	3	31	junction_1	6.79613860953409	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTCTTTGTTGTA	-38422694	True	NA	-2	True	AATAAA	-18	NA	38424454	38406524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
WTC11_00088109	chr9	-	872	3	FSM	ENSG00000273036.3	ENST00000562942.2	871	3	0	-1	0	1	multi-exon	TRUE	canonical	3	13	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGTCTCTCTCTGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	38542792	38540565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38540850_38541455_38541563_38542311
WTC11_00088110	chr9	-	1750	1	FSM	ENSG00000225345.3	ENST00000565670.1	1750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAACTTTGAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	38568009	38566259	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38566300_38568000
WTC11_00088111	chr9	-	276	4	FSM	ENSG00000180071.20	ENST00000475234.1	279	4	3	0	3	0	multi-exon	FALSE	canonical	3	13	junction_2	1.88561808316413	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGCTCCAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	38604916	38601168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38601202_38603158_38603213_38604152_38604288_38604862
WTC11_00088112	chr9	-	5614	21	NIC	ENSG00000106714.18	novel	13150	24	NA	NA	45927	1045	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.49636243346452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTTCTGCCAAAGAG	NA	False	NA	NA	False	GATAAA	-45	NA	39193247	39071721	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_39074012_39078384_39078457_39078689_39078921_39085735_39085824_39086715_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133133_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127
WTC11_00088113	chr9	-	720	1	FSM	ENSG00000243695.1	ENST00000425044.1	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATTATTGAGTATAGC	NA	False	NA	NA	False	NA	NA	NA	39174513	39173793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39173800_39174500
WTC11_00088114	chr9	-	3375	1	FSM	ENSG00000198416.9	ENST00000615961.1	3375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCTAGGTATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	39447189	39443814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39443800_39447200
WTC11_00088115	chr9	-	709	2	FSM	ENSG00000278175.5	ENST00000666906.2	1012	2	305	-2	96	0	multi-exon	FALSE	canonical	3	105	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCCAGTTCTTTTATA	-39809698	False	NA	NA	False	AATAAA	-30	NA	39809815	39803480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39803860_39809485
WTC11_00088116	chr9	-	841	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCCAGTTCTTTTATA	-39809945	False	442	NA	False	AATAAA	-30	NA	39810062	39803480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39803860_39809485_39809616_39809730
WTC11_00088118	chr9	-	2608	2	FSM	ENSG00000278175.5	ENST00000625350.1	2588	2	-25	5	-1	-5	multi-exon	FALSE	canonical	3	109	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCGGGCCAG	-39809646	True	NA	NA	False	NA	NA	NA	39810088	39807365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39809616_39809730
WTC11_00088119	chr9	-	4153	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	-2207	-58	-2207	58	multi-exon	FALSE	canonical	2	9	junction_2	5	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTCATATGCTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	39876769	39816540	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39817730_39818820_39818925_39873909
WTC11_00088120	chr9	-	1053	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	16	-107556	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTCCTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	40106595	40091348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_40092164_40106357
WTC11_00088121	chr9	-	989	7	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_6	13.208793367383	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCTTTTATAAACTTC	-40584348	False	NA	NA	False	AATGAA	-42	NA	40584358	40573347	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_40573574_40574978_40575160_40575243_40575433_40578183_40578356_40578998_40579069_40584117_40584183_40584272
WTC11_00088122	chr9	-	2996	3	FSM	ENSG00000215126.11	ENST00000611553.4	2996	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	-41145972	False	NA	NA	False	ATTAAA	-15	NA	41145992	41131355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41133571_41133673_41133743_41145280
WTC11_00088123	chr9	-	3336	6	FSM	ENSG00000215126.11	ENST00000617917.4	3334	6	0	-2	0	0	multi-exon	FALSE	canonical	3	139	junction_3	164.695597998246	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	41158916	41131355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382
WTC11_00088125	chr9	-	1293	14	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_7	436.378900015455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189367	41131677	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
WTC11_00088128	chr9	-	662	4	ISM	ENSG00000215126.11	ENST00000613716.4	1820	16	30	52108	5	-11494	5prime_fragment	FALSE	canonical	3	18	junction_2	517.521228764794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189334	41183413	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_41183661_41185992_41186080_41188009_41188108_41189104
WTC11_00088129	chr9	-	638	2	NNC	ENSG00000237357.2	novel	2579	2	NA	NA	6	3823	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTGTTCTTTGGCCT	NA	False	NA	NA	False	NA	NA	NA	42569347	42562855	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_42563175_42569028
WTC11_00088130	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62376383_62376497
WTC11_00088132	chr9	-	541	1	FSM	ENSG00000212951.5	ENST00000473402.1	457	1	-98	14	-98	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCCTTCAGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	62532951	62532410	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62532400_62533000
WTC11_00088133	chr9	-	1180	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	533	0	-28	multi-exon	FALSE	canonical	2	8	junction_2	13.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTACCTTATAAAAATT	NA	False	NA	NA	False	AATGAA	-3	NA	62898095	62867735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62868234_62869189_62869305_62897528
WTC11_00088134	chr9	-	354	7	FSM	ENSG00000204790.9	ENST00000485382.3	386	7	32	0	32	0	multi-exon	FALSE	canonical	1	14	junction_3	88.3542428082671	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAGAAAAAAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	64004123	63974761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_63974814_63986226_63986284_63992144_63992190_63994813_63994901_63996584_63996632_64002526_64002565_64004095
WTC11_00088135	chr9	-	655	9	FSM	ENSG00000204778.4	ENST00000445695.1	655	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	621.671423965265	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACACTAGTGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	65323015	65287913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65318515_65318561_65321192_65321280_65322968
WTC11_00088136	chr9	-	577	3	FSM	ENSG00000278910.5	ENST00000690153.1	617	3	38	2	27	2	multi-exon	FALSE	canonical	3	8	junction_2	2.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGCACATTTCTG	-69307026	True	NA	NA	False	AATAAA	-22	NA	69307100	69296679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69296868_69304935_69305078_69306853
WTC11_00088137	chr9	-	346	3	FSM	ENSG00000107282.8	ENST00000470082.2	367	3	0	21	0	-21	multi-exon	FALSE	canonical	1	2	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATGGGAAAAGGCAGTAC	NA	False	NA	NA	False	NA	NA	NA	69467948	69456299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69456433_69457052_69457140_69467822
WTC11_00088138	chr9	-	10175	7	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	0	-5	intron_retention	FALSE	canonical	3	48	junction_5	5.79271573232759	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGAGTGTTAAGTGTG	-69752823	True	NA	-9	True	AGTAAA	-13	NA	69760011	69709529	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
WTC11_00088139	chr9	-	10102	8	FSM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	-3	0	0	multi-exon	TRUE	canonical	3	8	junction_1	16.8559321599131	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTGTGATTTTGTT	-69752823	True	NA	-1	True	AGTAAA	-21	NA	69760011	69709521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69718569_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
WTC11_00088141	chr9	-	1726	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	4	-41	0	41	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAAAATACAGTTCTTG	-69752767	True	NA	NA	False	AATAGA	-1	NA	69759955	69757081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69758705_69759852
WTC11_00088142	chr9	-	582	2	NNC	ENSG00000188647.13	novel	1689	2	NA	NA	-3	-643	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAAGGCATTGT	-69752756	True	NA	NA	False	AATAAA	-17	NA	69759944	69757765	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_69758256_69759852
WTC11_00088143	chr9	-	2398	17	ISM	ENSG00000083067.24	ENST00000396285.5	4701	23	-128	67420	0	-67420	5prime_fragment	FALSE	canonical	2	6	junction_6	4.09982850251081	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACCCTGGGAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	70863038	70603372	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_70603471_70610608_70610750_70615907_70616076_70618866_70619096_70620075_70620366_70621243_70621274_70625190_70625332_70635210_70635262_70639059_70639195_70640559_70640661_70681505_70681579_70761600_70761725_70784104_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907
WTC11_00088144	chr9	-	6154	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	-2	0	2	multi-exon	TRUE	canonical	3	69	junction_22	20.2386517479468	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATGTGAATTTA	-71765795	True	NA	-9	True	AATAAA	-24	NA	71768513	71683363	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
WTC11_00088145	chr9	-	5217	23	FSM	ENSG00000135048.14	ENST00000377066.9	5217	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_18	30.1630897533902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGGCTCCACAGCCTGG	-71768222	False	NA	NA	False	NA	NA	NA	71768386	71683984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
WTC11_00088146	chr9	-	1320	5	FSM	ENSG00000107362.14	ENST00000377041.6	1312	5	0	-8	0	8	multi-exon	FALSE	canonical	2	4	junction_1	109.805509879969	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTATTTTTTTAATG	-71906600	False	NA	NA	False	CATAAA	-25	NA	71910931	71862443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71862608_71866798_71867007_71870082_71870263_71874613_71875084_71910633
WTC11_00088147	chr9	-	3065	4	FSM	ENSG00000107362.14	ENST00000333421.7	3065	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	24.8506650928211	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	-71906862	True	NA	-45	True	AGTAAA	-20	NA	71911193	71865151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71867007_71870082_71870263_71874613_71875084_71910633
WTC11_00088148	chr9	-	375	1	FSM	ENSG00000236060.2	ENST00000423240.1	256	1	8	-127	8	127	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAGATAGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	72008128	72007753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72007800_72008100
WTC11_00088149	chr9	-	6060	6	FSM	ENSG00000107372.13	ENST00000237937.7	5310	6	-384	-366	0	354	multi-exon	FALSE	canonical	2	3	junction_5	263.673737789716	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGCCAGGAAAAAAAATAC	-72364953	False	NA	NA	False	NA	NA	NA	72364976	72351058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364461
WTC11_00088150	chr9	-	5841	7	FSM	ENSG00000107372.13	ENST00000376962.10	5841	7	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_5	187.961579998561	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAAGACTCCATTTT	-72344574	True	NA	14	True	AATAAA	-32	NA	72365208	72351412	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364695
WTC11_00088151	chr9	-	2686	6	FSM	ENSG00000107372.13	ENST00000376960.8	2686	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	141.609886660501	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTGTTCATTGGGTT	-72344601	True	NA	-4	True	AATAAA	-20	NA	72365235	72354457	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364695
WTC11_00088152	chr9	-	631	2	FSM	ENSG00000107372.13	ENST00000487330.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTCTTTTTTGGG	-72364953	False	NA	NA	False	AATGAA	-27	NA	72364976	72360437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72360788_72364695
WTC11_00088153	chr9	-	2355	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	-4	0	4	multi-exon	FALSE	canonical	3	148	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTTATTGTCAAGCAA	-74951376	True	NA	-14	True	AATAAA	-19	NA	74952912	74946578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_74948207_74952185
WTC11_00088154	chr9	-	4259	8	FSM	ENSG00000156017.13	ENST00000376834.8	4259	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	24.6626214737847	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGATTTTCAGTTTT	-75021811	True	NA	NA	False	AATAAA	-26	NA	75028293	74980789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75028011
WTC11_00088155	chr9	-	715	5	FSM	ENSG00000156017.13	ENST00000451153.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	120.458499077483	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAATGCAGTAAGTCC	-75027088	False	NA	NA	False	NA	NA	NA	75027099	74998609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75027052
WTC11_00088156	chr9	-	1754	9	FSM	ENSG00000106733.21	ENST00000361092.9	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5589521583922	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	-75087031	True	NA	NA	False	AATAAA	-15	NA	75088155	75060576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
WTC11_00088157	chr9	-	2048	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	2	0	2	multi-exon	FALSE	canonical	2	2	junction_8	25.8891273236517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAATCTTTTTTTTATA	-75087066	True	NA	NA	False	AATAAA	-17	NA	75088190	75060574	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
WTC11_00088158	chr9	-	1138	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	-74	-611	0	611	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTTAAAAAAAAAAAA	-75087085	True	NA	NA	False	NA	NA	NA	75088209	75086932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75087869_75088007
WTC11_00088159	chr9	-	2749	5	NNC	ENSG00000135002.12	novel	2386	5	NA	NA	-23	1561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.8799702219756	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAAGTTTGAGGATAGA	NA	False	NA	NA	False	NA	NA	NA	76394540	76383964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_76383995_76385516_76387530_76388553_76388657_76392417_76392570_76394089
WTC11_00088160	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	7.25718035235908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-76394280	False	NA	-15	True	AATAAA	-17	NA	76394426	76385525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
WTC11_00088161	chr9	-	4229	11	NNC	ENSG00000106772.19	novel	7434	11	NA	NA	0	2948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.0639052779749	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAAGTCAGTCACTA	NA	False	NA	NA	False	AGTAAA	-23	NA	76703438	76608427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_76608445_76611375_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644913_76652482_76652684_76655422_76655503_76703336
WTC11_00088162	chr9	-	12356	18	FSM	ENSG00000106772.19	ENST00000443509.6	12356	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.36754317053853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATTCTCCATAATG	-76905984	False	NA	NA	False	AATAAA	-24	NA	76906041	76611480	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644910_76652482_76652684_76655422_76655503_76703336_76704100_76704760_76711359_76713562_76713722_76823631_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
WTC11_00088165	chr9	-	3729	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	-1232	0	-1232	0	multi-exon	FALSE	canonical	3	133	junction_4	7.82446306287034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	NA	False	NA	-8	True	AATATA	-15	NA	77649554	77423078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
WTC11_00088167	chr9	-	6874	7	FSM	ENSG00000156052.11	ENST00000286548.9	6882	7	0	8	0	-8	multi-exon	FALSE	canonical	3	284	junction_1	15.0526852532475	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACACCAAAAAACC	-78030302	True	NA	52	True	AATAAA	-22	NA	78031811	77716104	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_77721514_77728513_77728668_77794462_77794593_77797519_77797649_77815615_77815771_77922160_77922346_78031099
WTC11_00088168	chr9	-	2273	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAGGATAGGAGAGTA	NA	False	NA	NA	False	AAGAAA	-44	NA	80142898	80140625	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_80140600_80142900
WTC11_00088171	chr9	-	4135	20	FSM	ENSG00000196781.16	ENST00000376499.8	4135	20	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_8	122.393489226291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676730	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00088176	chr9	-	2536	7	ISM	ENSG00000196781.16	ENST00000418319.5	936	9	-1093	13015	6	0	5prime_fragment	FALSE	canonical	3	157	junction_1	239.695234736854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	-81676724	True	NA	-2	True	AATAAA	-18	NA	81689541	81633468	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00088177	chr9	-	2509	7	ISM	ENSG00000196781.16	ENST00000376499.8	4135	20	3	49786	3	0	5prime_fragment	FALSE	canonical	3	427	junction_1	150.909925304983	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	-81676727	True	NA	-2	True	AATAAA	-18	NA	81689544	81633468	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00088178	chr9	-	366	4	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141371	-183	multi-exon	FALSE	canonical	3	24	junction_2	31.8224239596337	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTGCAATACAGATGTAA	-82885783	True	NA	26	True	NA	NA	NA	82886163	82744249	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_82744445_82782325_82782383_82831037_82831127_82886138
WTC11_00088180	chr9	-	5642	17	FSM	ENSG00000165105.10	ENST00000376447.4	5585	17	-61	4	-26	-4	multi-exon	TRUE	canonical	3	28	junction_11	4.64858849544676	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTTTGAGTGTTTCCT	-83062933	False	NA	-9	True	AATAAA	-13	NA	83063203	82979593	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_82982783_82990390_82990468_82992905_82993026_82997011_82997127_82998364_82998447_83000168_83000317_83000432_83000571_83000895_83001131_83004497_83004587_83005415_83005501_83007436_83007506_83009640_83009757_83012433_83012512_83015804_83015901_83022335_83022427_83025774_83025922_83062436
WTC11_00088183	chr9	-	1515	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	-4	0	4	multi-exon	FALSE	canonical	3	17	junction_5	10.0995049383621	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGATTTGTTAAGTT	-83816890	False	NA	0	True	AATAAA	-22	NA	83817632	83739420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
WTC11_00088184	chr9	-	545	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-60	-20835	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGTTACTTAATGG	-83920767	True	NA	NA	False	AATAAA	-18	NA	83921525	83919530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_83919814_83920105_83920213_83921370
WTC11_00088185	chr9	-	2468	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	5.43650214343336	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	-83955483	True	NA	-5	True	AATAAA	-23	NA	83956742	83938310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
WTC11_00088187	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1552.19392614937	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83943539	True	NA	-4	True	AATATA	-14	NA	83980215	83968082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
WTC11_00088188	chr9	-	2787	16	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	1279	junction_9	2127.1453797676	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963559	True	NA	-4	True	AATATA	-14	NA	83980595	83968082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
WTC11_00088189	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	FALSE	canonical	3	5662	junction_16	1090.54421620584	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963568	True	NA	-4	True	AATATA	-14	NA	83980604	83968082	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
WTC11_00088191	chr9	-	2750	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	-712	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1584.04012240063	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-83943574	True	NA	-25	True	AATAAA	-1	NA	83980250	83968196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
WTC11_00088195	chr9	-	1283	15	FSM	ENSG00000165119.21	ENST00000457156.5	1283	15	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_8	2420.56240829461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTGGTCAGCGGATT	-83943514	True	NA	NA	False	TTTAAA	-32	NA	83980190	83970312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
WTC11_00088196	chr9	-	822	9	FSM	ENSG00000165119.21	ENST00000472778.5	822	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	2893.18188807755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCAGAACACTTTTTG	-83963580	True	NA	NA	False	CATAAA	-26	NA	83980616	83972843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
WTC11_00088199	chr9	-	1058	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-16337	7	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	9	249	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTTATTCACATGAA	-85460630	False	NA	8	True	ATTAAA	-28	NA	85460746	85402154	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_85402688_85457364_85457476_85460332
WTC11_00088200	chr9	-	4350	26	FSM	ENSG00000135049.16	ENST00000376083.7	4208	26	0	-142	0	142	multi-exon	TRUE	canonical	3	51	junction_16	41.8721864726455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-85737913	False	NA	NA	False	AAAAAG	-45	NA	85741818	85546396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655201_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
WTC11_00088206	chr9	-	3916	25	ISM	ENSG00000135049.16	ENST00000357081.8	4464	26	12	28564	12	-21230	5prime_fragment	FALSE	canonical	3	140	junction_15	28.9121934580473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGGTTGTACTGGT	-85738037	True	NA	NA	False	AATAAA	-16	NA	85741942	85575102	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
WTC11_00088207	chr9	-	3851	24	ISM	ENSG00000135049.16	ENST00000337006.8	4473	25	87	28563	12	-21230	5prime_fragment	FALSE	canonical	2	6	junction_23	50.8046780514281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGGTTGTACTGGT	-85738037	True	NA	NA	False	AATAAA	-16	NA	85741942	85575102	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85741774
WTC11_00088208	chr9	-	5178	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	-2132	0	2132	multi-exon	FALSE	canonical	0	0	junction_7	363.547643217349	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTAGAAACCTGCTGTT	-86091481	True	NA	NA	False	TATAAA	-18	NA	86099558	86024013	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
WTC11_00088209	chr9	-	3023	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_7	472.028430824005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-86099797	True	NA	NA	False	AATAAA	-18	NA	86100149	86026145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
WTC11_00088210	chr9	-	1968	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	-1	0	1	multi-exon	FALSE	canonical	3	395	junction_1	32.2214559295855	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATTATTGAGGGG	-86279146	True	NA	NA	False	ATTAAA	-31	NA	86282538	86264544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
WTC11_00088211	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	192.236544103583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	-86278716	False	3392	81	True	NA	NA	NA	86282108	86265678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
WTC11_00088212	chr9	-	5617	27	FSM	ENSG00000083223.18	ENST00000375963.8	5603	27	0	-14	0	14	multi-exon	FALSE	canonical	3	48	junction_15	11.8888466453316	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGAAAGATTCCT	-86353100	True	NA	-10	True	AATAAA	-35	NA	86354410	86287718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
WTC11_00088213	chr9	-	10625	26	ISM	ENSG00000083223.18	ENST00000375963.8	5603	27	-56	7565	-12	-7563	5prime_fragment	FALSE	canonical	3	48	junction_14	11.3395590743203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATCAAATGAAGTATAAA	-86354451	False	NA	NA	False	AATAAA	-21	NA	86354466	86295297	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
WTC11_00088214	chr9	-	958	5	FSM	ENSG00000083223.18	ENST00000375948.2	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	7.75806032459145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTCATGTGATCACT	-86343106	False	NA	NA	False	TTTAAA	-7	NA	86343123	86336878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074
WTC11_00088219	chr9	-	2245	7	FSM	ENSG00000156345.18	ENST00000375883.7	2301	7	61	-5	-7	0	multi-exon	TRUE	canonical	3	7	junction_3	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	-87974671	False	NA	NA	False	AATAAA	-29	NA	87974692	87966440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
WTC11_00088220	chr9	-	9819	12	FSM	ENSG00000148082.10	ENST00000375835.9	9819	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8.06891802018889	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTGGATGATGGA	-89177929	True	NA	0	True	AATAAA	-18	NA	89178818	89005770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89013576_89037992_89038289_89042025_89042185_89045745_89045834_89046843_89046995_89052036_89052164_89065528_89065581_89071198_89071253_89075108_89075229_89077839_89077904_89112555_89112627_89177986
WTC11_00088221	chr9	-	2893	2	FSM	ENSG00000224945.1	ENST00000456944.1	583	2	-2310	0	-1674	0	multi-exon	FALSE	canonical	3	56	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTATGTCCATGGAGTT	NA	False	NA	-1	True	ATTAAA	-22	NA	89111608	89088603	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89088936_89109047
WTC11_00088223	chr9	-	2365	4	FSM	ENSG00000187764.12	ENST00000492386.5	2396	4	0	31	0	-31	multi-exon	FALSE	canonical	3	16	junction_3	2.05480466765633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGAAAAAATAAAAATAGA	-89377271	False	NA	NA	False	NA	NA	NA	89377282	89360821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832
WTC11_00088224	chr9	-	7017	21	NIC	ENSG00000187764.12	novel	4275	20	NA	NA	0	-31	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	66.1772430673868	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGAAAAAATAAAAATAGA	-89496139	True	NA	NA	False	NA	NA	NA	89498113	89360821	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89418362_89418438_89455887_89455954_89497918
WTC11_00088229	chr9	-	4562	16	FSM	ENSG00000187764.12	ENST00000422704.7	4562	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_14	32.7859048305145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-89496139	True	NA	0	True	AATAAA	-21	NA	89498113	89377234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89455887_89455954_89497918
WTC11_00088233	chr9	-	1490	9	FSM	ENSG00000148090.12	ENST00000303617.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	92.5262631634932	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTACCCCATTCT	-91355288	True	NA	NA	False	AATAAA	-25	NA	91361913	91213814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91355882_91355971_91356087_91356156_91361627
WTC11_00088234	chr9	-	1582	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	-8	0	0	multi-exon	FALSE	canonical	3	235	junction_9	28.9473766908843	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTACCCCATTCT	-91355293	True	NA	NA	False	AATAAA	-25	NA	91361918	91213814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
WTC11_00088236	chr9	-	2077	2	FSM	ENSG00000165030.4	ENST00000297689.4	2055	2	0	-22	0	22	multi-exon	FALSE	canonical	3	101	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATGGAGAAGAAAAGTCA	-91422770	True	NA	22	True	AATAAA	-44	NA	91423832	91409022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91410907_91423639
WTC11_00088237	chr9	-	4163	9	FSM	ENSG00000169071.15	ENST00000375708.4	4158	9	0	-5	0	5	multi-exon	FALSE	canonical	3	56	junction_2	13.3644818455487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCTCTTGCAGGTTGT	-91948750	True	NA	-3	True	AATAAA	-19	NA	91950228	91722595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
WTC11_00088238	chr9	-	408	2	FSM	ENSG00000169071.15	ENST00000493846.1	370	2	-126	88	39	-88	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTGCAACAAGCAACAA	-91948825	False	1478	NA	False	NA	NA	NA	91948841	91923755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91923929_91948606
WTC11_00088239	chr9	-	3438	12	NNC	ENSG00000090054.16	novel	2792	16	NA	NA	8853	-7826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.510479289886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGCTATTCAGTAT	-92071199	False	NA	NA	False	NA	NA	NA	92071223	92008767	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_92008794_92031147_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92070123
WTC11_00088241	chr9	-	2789	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	-6	0	2	multi-exon	FALSE	canonical	3	688	junction_4	56.4137864898506	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTTGCATATGTAATA	-92105036	True	NA	-5	True	AATAAA	-20	NA	92115413	92031140	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
WTC11_00088244	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	298.956451678167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	-92105006	True	NA	NA	False	AATAAA	-27	NA	92115383	92079060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
WTC11_00088247	chr9	-	4559	35	FSM	ENSG00000196305.19	ENST00000683565.1	4535	35	0	-24	0	-3	multi-exon	FALSE	canonical	2	23	junction_33	454.412598514369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATCCCAGGTGATAA	-92275067	True	NA	-11	True	AATAAA	-8	NA	92293693	92210213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92290835_92290923_92293610
WTC11_00088248	chr9	-	4561	33	FSM	ENSG00000196305.19	ENST00000683192.1	4537	33	0	-24	0	-3	multi-exon	FALSE	canonical	3	19	junction_29	431.698928471858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATCCCAGGTGATAA	-92275069	True	NA	-11	True	AATAAA	-8	NA	92293695	92210213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92287790_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088249	chr9	-	6512	32	FSM	ENSG00000196305.19	ENST00000684726.1	6488	32	0	-24	0	-3	multi-exon	FALSE	canonical	3	441	junction_31	339.423398569335	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATCCCAGGTGATAA	-92275069	True	NA	-11	True	AATAAA	-8	NA	92293695	92210213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088250	chr9	-	4487	34	FSM	ENSG00000196305.19	ENST00000443024.7	4483	34	0	-4	0	4	multi-exon	FALSE	canonical	3	1048	junction_33	278.138997826679	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATAATTTGAGTCCTC	-92275071	True	NA	0	True	AATAAA	-19	NA	92293697	92210202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088251	chr9	-	4660	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	-4	0	4	multi-exon	FALSE	canonical	3	441	junction_33	329.625992248549	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATAATTTGAGTCCTC	-92275074	True	NA	0	True	AATAAA	-19	NA	92293700	92210202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088253	chr9	-	4595	35	FSM	ENSG00000196305.19	ENST00000447699.7	4587	35	0	-8	0	4	multi-exon	FALSE	canonical	3	101	junction_5	424.019663153119	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATAATTTGAGTCCTC	-92275130	True	NA	0	True	AATAAA	-19	NA	92293756	92210202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088254	chr9	-	4389	11	FSM	ENSG00000196305.19	ENST00000682521.1	4384	11	0	-5	0	0	multi-exon	FALSE	canonical	3	1754	junction_9	144.205409052504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92252714	False	NA	-35	True	CATAAA	-33	NA	92252749	92210237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186
WTC11_00088255	chr9	-	5833	34	FSM	ENSG00000196305.19	ENST00000682156.1	5830	34	0	-3	0	0	multi-exon	FALSE	canonical	3	15	junction_14	498.387421629567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACTAGACATCTAATAAAA	-92275042	True	NA	-37	True	CATAAA	-31	NA	92293668	92210239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92255534_92255605_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088257	chr9	-	4375	34	FSM	ENSG00000196305.19	ENST00000684557.1	4370	34	0	-5	0	0	multi-exon	FALSE	canonical	3	229	junction_12	362.996712666651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92275069	True	NA	-35	True	CATAAA	-33	NA	92293695	92210237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088258	chr9	-	8649	32	FSM	ENSG00000196305.19	ENST00000682893.1	8644	32	0	-5	0	0	multi-exon	FALSE	canonical	3	1048	junction_31	284.05961107324	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92275069	True	NA	-35	True	CATAAA	-33	NA	92293695	92210237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92251886_92253361_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088259	chr9	-	4563	34	NNC	ENSG00000196305.19	novel	4656	34	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_15	425.709780558944	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	-92275020	True	NA	-40	True	CATAAA	-28	NA	92293646	92210242	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256798_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088266	chr9	-	4447	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	-4	0	0	multi-exon	FALSE	canonical	3	78	junction_3	416.581132818549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275063	True	NA	-18	True	AATAAA	-12	NA	92293689	92210344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
WTC11_00088268	chr9	-	7618	34	FSM	ENSG00000196305.19	ENST00000472894.2	7614	34	0	-4	0	0	multi-exon	FALSE	canonical	3	101	junction_5	430.264893743237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275069	True	NA	-18	True	AATAAA	-12	NA	92293695	92210344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088271	chr9	-	4304	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	-4	0	0	multi-exon	FALSE	canonical	3	78	junction_3	379.685155442696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
WTC11_00088275	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	59.7821239481335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-92321609	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
WTC11_00088279	chr9	-	4349	17	FSM	ENSG00000198000.12	ENST00000545558.5	4343	17	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.0833301458588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	-92321609	True	NA	-18	True	AATAAA	-19	NA	92325350	92297483	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92324905
WTC11_00088280	chr9	-	4341	17	FSM	ENSG00000198000.12	ENST00000360868.7	4341	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	75.4474154626916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGATAGTCCTTGAAA	-92324615	False	NA	NA	False	ATTAAA	-21	NA	92324660	92297613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323235_92323352_92323440_92323504_92324022
WTC11_00088294	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.1280002413551	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	-92667679	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
WTC11_00088296	chr9	-	6448	7	FSM	ENSG00000185963.14	ENST00000356884.11	6448	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	12.7235564559949	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	-92762629	True	NA	-5	True	AATAAA	-24	NA	92764833	92711362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
WTC11_00088297	chr9	-	2707	1	Genic_Genomic	ENSG00000288062.1	novel	NA	NA	NA	NA	1061	27	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTATGGTACAGAAT	-92808097	False	NA	-23	True	AATAAA	-12	NA	92808110	92805403	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_92805400_92808100
WTC11_00088300	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	16.6799946709291	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-93130030	True	NA	-17	True	AATAAA	-25	NA	93134251	93121495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
WTC11_00088304	chr9	-	5367	3	FSM	ENSG00000188938.17	ENST00000479094.5	1905	3	-223	-3239	-159	77	multi-exon	FALSE	canonical	0	0	junction_1	23	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGCTTGCCTTCTT	-93451313	False	NA	58	True	ATTAAA	-40	NA	93451747	93443254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93450944
WTC11_00088305	chr9	-	5934	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	-12	0	12	multi-exon	FALSE	canonical	0	0	junction_1	20.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTAGCAACACAGGGA	-93453147	True	NA	-7	True	AATAAA	-28	NA	93453581	93443319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93452146
WTC11_00088306	chr9	-	1770	3	NNC	ENSG00000188938.17	novel	1800	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93447785	True	NA	NA	False	AGTAAA	-25	NA	93451518	93446493	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93447698_93450478_93450614_93451087
WTC11_00088307	chr9	-	1800	3	FSM	ENSG00000188938.17	ENST00000423591.5	1800	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93447829	True	NA	NA	False	AGTAAA	-25	NA	93451562	93446493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93451087
WTC11_00088312	chr9	-	1511	4	FSM	ENSG00000131668.14	ENST00000253968.11	1511	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	10.077477638554	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGCTCGGTGGAGCAGCT	-93955024	True	NA	-5	True	AATAAA	-17	NA	93955355	93951626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93952329_93952728_93952814_93952895_93953188_93954923
WTC11_00088314	chr9	-	1475	7	FSM	ENSG00000165140.12	ENST00000375326.9	1473	7	0	-2	0	2	multi-exon	FALSE	canonical	3	24	junction_6	5.05525029603437	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTTGCTTTGTGTCAAA	-94639251	False	267	NA	False	AATAAA	-24	NA	94639518	94603130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140
WTC11_00088315	chr9	-	1481	8	FSM	ENSG00000165140.12	ENST00000415431.5	1487	8	14	-8	14	0	multi-exon	FALSE	canonical	3	9	junction_7	10.0244598816279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	94640235	94603132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639335_94640043
WTC11_00088316	chr9	-	1173	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	7.15697018452796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	-94639854	True	NA	NA	False	AATAAA	-22	NA	94640121	94603132	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
WTC11_00088318	chr9	-	4589	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	3	0	3	0	multi-exon	TRUE	canonical	3	31	junction_14	6.37637540184909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-95317290	True	NA	0	True	AATAAA	-19	NA	95317706	95099053	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
WTC11_00088321	chr9	-	1416	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	-76	64	-76	-64	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCGTACGTTATGACCC	-95426258	True	NA	-72	True	NA	NA	NA	95426872	95414897	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95416165_95426723
WTC11_00088322	chr9	-	4389	3	FSM	ENSG00000185920.18	ENST00000546744.5	4389	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTTGTTTGTAGAATG	-95449919	False	NA	-7	True	AATAAA	-22	NA	95449936	95443411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95446392_95446910_95447452_95449068
WTC11_00088323	chr9	-	7641	22	NIC	ENSG00000185920.18	novel	8662	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_2	7.6540860991764	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTTGTTTGTAGAATG	-95506060	False	NA	-7	True	AATAAA	-22	NA	95506599	95443411	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_95446392_95446910_95447452_95449068_95449941_95453477_95453621_95456275_95456414_95458012_95458294_95459599_95459784_95461855_95461999_95467115_95467426_95468750_95469154_95469812_95469932_95476033_95476160_95476758_95476858_95477546_95477703_95478054_95478187_95478999_95479148_95479968_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95506406
WTC11_00088325	chr9	-	553	3	FSM	ENSG00000185920.18	ENST00000548420.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAACAGCACTGGAAAAC	-95506126	False	NA	NA	False	NA	NA	NA	95506665	95479995	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95480091_95480389_95480589_95506406
WTC11_00088326	chr9	-	1263	2	FSM	ENSG00000185920.18	ENST00000550136.1	2388	2	1005	120	1005	17	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTGTGATCATGCTT	-95483288	False	NA	NA	False	NA	NA	NA	95483304	95481948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95482041_95482133
WTC11_00088327	chr9	-	539	4	FSM	ENSG00000185920.18	ENST00000551630.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	10.7806410858642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAGCATACCTCCTGTA	-95506071	False	43	NA	False	NA	NA	NA	95506610	95481965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95482041_95482133_95482204_95485684_95485875_95506406
WTC11_00088328	chr9	-	1303	1	NIC	ENSG00000185920.18	novel	8662	24	NA	NA	326	-21814	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTGTTGAGCAT	-95508928	False	NA	1	True	AATAAA	-25	NA	95508940	95507637	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_95507600_95508900
WTC11_00088330	chr9	-	1994	2	FSM	ENSG00000175611.13	ENST00000657579.1	1994	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATGTCATCTCAACA	-95874791	True	NA	NA	False	AATAAA	-6	NA	95875583	95869051	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95870442_95874979
WTC11_00088331	chr9	-	1623	12	FSM	ENSG00000130958.13	ENST00000253270.13	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	11.1384970127248	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTCATCATGTGAT	-96382381	True	NA	-10	True	AATAAA	-13	NA	96383711	96320709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96321342_96321997_96322081_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
WTC11_00088332	chr9	-	886	6	FSM	ENSG00000130958.13	ENST00000375257.2	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	11.8995798245148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGCTGATTTATTT	-96382348	True	NA	NA	False	NA	NA	NA	96383678	96350748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
WTC11_00088333	chr9	-	3688	5	FSM	ENSG00000165244.7	ENST00000375256.5	3687	5	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_4	4.65698400254929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTACACGGTCATTCT	-96417243	True	NA	-7	True	AATAAA	-21	NA	96418370	96385939	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96388460_96392397_96392537_96394822_96394943_96398163_96398315_96417612
WTC11_00088335	chr9	-	5607	14	FSM	ENSG00000081377.17	ENST00000375241.6	5602	14	0	-5	0	0	multi-exon	FALSE	canonical	3	93	junction_2	62.2605709757375	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATTGTGTTACT	-96616149	True	NA	0	True	ATTAAA	-19	NA	96619843	96500107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96503790_96509672_96509790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
WTC11_00088336	chr9	-	2547	13	FSM	ENSG00000081377.17	ENST00000375240.7	2547	13	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	49.9263346230112	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGAATATATAGTA	-96615684	False	NA	NA	False	NA	NA	NA	96619378	96502585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96503790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
WTC11_00088340	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.34350061086148	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-96653829	True	NA	3	True	AATAAA	-21	NA	96655317	96639576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
WTC11_00088341	chr9	-	1109	5	NIC	ENSG00000158122.12	novel	2899	6	NA	NA	-16	-1674	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	15.4656878282215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTGTTAAGATTAGTG	-96653845	True	NA	1	True	AATAAA	-24	NA	96655333	96641250	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96641887_96651389_96651496_96651658_96651713_96654704_96654774_96655089
WTC11_00088342	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	11.1247471881387	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-96777389	True	NA	3	True	AATAAA	-20	NA	96778087	96754552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
WTC11_00088345	chr9	-	1072	4	NIC	ENSG00000196312.15	novel	1246	8	NA	NA	0	165	combination_of_known_splicesites	FALSE	canonical	2	14	junction_3	140.009523485607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTCACGTCACACCA	-97008021	True	NA	NA	False	AAAAAG	-14	NA	97013580	96933356	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96933916_96949554_96949683_96958834_96958898_97013258
WTC11_00088346	chr9	-	831	5	FSM	ENSG00000196312.15	ENST00000637099.1	832	5	1	0	1	0	multi-exon	FALSE	canonical	3	47	junction_2	117.246268597342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCACCTGTAATCCCAG	NA	False	NA	NA	False	AATACA	-23	NA	96972948	96933521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852
WTC11_00088347	chr9	-	1802	5	FSM	ENSG00000196312.15	ENST00000637864.1	1802	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	112.443319054535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	-97008041	True	NA	-1	True	AATAAA	-16	NA	97013600	96942912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96944086_96949554_96949683_96958834_96958898_96972852_96972949_97013258
WTC11_00088348	chr9	-	928	5	NNC	ENSG00000196312.15	novel	1802	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	98.7835386084139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	-97008098	True	NA	-1	True	AATAAA	-16	NA	97013657	96942912	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96943155_96949554_96949683_96958834_96958898_96972852_96972949_97013258
WTC11_00088350	chr9	-	900	3	FSM	ENSG00000196312.15	ENST00000637811.1	900	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGATACTAGAAACATGC	-97008149	True	NA	NA	False	AAGAAA	-32	NA	97013708	96949295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96949683_96958834_96958898_97013258
WTC11_00088353	chr9	-	4494	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	3	0	-3	multi-exon	FALSE	canonical	2	7	junction_8	366.579779004516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTGTTCTTGTTCTGCA	-97033143	True	NA	-3	True	AGTAAA	-16	NA	97039142	97029679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
WTC11_00088354	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	290.418768719396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033141	True	NA	NA	False	AATAAA	-19	NA	97039140	97032654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
WTC11_00088355	chr9	-	801	1	FSM	ENSG00000277103.1	ENST00000618889.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTGTTGAATGACTAGAT	-97152658	False	NA	NA	False	AAAAAG	-15	NA	97152694	97151893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97151900_97152700
WTC11_00088356	chr9	-	1228	5	Fusion	ENSG00000159712.10_ENSG00000136943.12	novel	2980	16	NA	NA	-5870	1109	multi-exon	FALSE	canonical	1	1	junction_1	17.0055138117024	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGACCCAGCAGCACAGG	-97162405	False	NA	NA	False	NA	NA	NA	97162426	97155460	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_97155696_97156531_97156586_97157783_97157830_97160181_97160403_97161754
WTC11_00088358	chr9	-	4691	1	FSM	ENSG00000188801.9	ENST00000568013.1	1209	1	-528	-2954	-528	2954	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTAGACT	-97200029	False	NA	NA	False	AATAAA	-19	NA	97200039	97195348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97195300_97200000
WTC11_00088360	chr9	-	338	2	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	579	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGGGACCTAGCTCGG	-97212986	False	NA	NA	False	GATAAA	-34	NA	97216891	97216338	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_97216380_97216594
WTC11_00088361	chr9	-	1860	2	FSM	ENSG00000203279.5	ENST00000366109.2	578	2	0	-1282	0	1268	multi-exon	FALSE	canonical	3	124	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATTTTAAAATAATATT	-97236947	True	NA	NA	False	NA	NA	NA	97238678	97236481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97238086_97238422
WTC11_00088365	chr9	-	1584	7	FSM	ENSG00000136936.11	ENST00000462523.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.6958174002346	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696256	True	NA	1	True	AATAAA	-22	NA	97697293	97674908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97675588_97682199_97682431_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
WTC11_00088367	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	9.12071817347735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97921979	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
WTC11_00088373	chr9	-	4499	6	FSM	ENSG00000106785.15	ENST00000341469.7	4480	6	0	-19	0	19	multi-exon	FALSE	canonical	1	34	junction_4	20.5075595817737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTGCTTCAAGTCCC	-98115674	True	NA	19	True	AATAAA	-42	NA	98119222	98084333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98088006_98091908_98092002_98094866_98095030_98099930_98100165_98109888_98109985_98118981
WTC11_00088375	chr9	-	5466	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	-10	0	10	multi-exon	TRUE	canonical	3	326	junction_1	35.4922876036308	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGATTTGTTCCACA	-98189409	True	NA	6	True	AATAAA	-32	NA	98192637	98120964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
WTC11_00088377	chr9	-	3063	12	FSM	ENSG00000095383.20	ENST00000342112.9	3046	12	0	-17	0	-1	multi-exon	FALSE	canonical	3	7	junction_11	12.0364460310281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTCTCAGTTACCAGTT	-98253929	True	NA	1	True	TATAAA	-44	NA	98255590	98199011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
WTC11_00088380	chr9	-	7177	15	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_4	131.048363093126	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792558	True	NA	-3	True	AATAAA	-23	NA	98796539	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00088381	chr9	-	7856	15	FSM	ENSG00000165138.18	ENST00000353234.5	7190	15	16	-682	0	2	multi-exon	FALSE	canonical	3	209	junction_4	121.434558675924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCACTTTGACTACATT	-98792558	True	NA	-6	True	ATTAAA	-15	NA	98796539	98731326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00088382	chr9	-	1203	5	NNC	ENSG00000165138.18	novel	646	3	NA	NA	34	2275	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	283.037541679545	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTACTGGGTTTT	-98792524	True	NA	2	True	AATAAA	-19	NA	98796505	98781294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98781646_98782466_98782574_98783952_98784158_98784831_98784877_98796010
WTC11_00088383	chr9	-	1544	4	ISM	ENSG00000165138.18	ENST00000353234.5	7190	15	18	51558	2	3	5prime_fragment	FALSE	canonical	3	251	junction_3	217.657733354202	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTCTTGTGATGATTG	-98792556	True	NA	-2	True	AGTAAA	-19	NA	98796537	98783566	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00088384	chr9	-	1041	3	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	458	junction_2	138	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCGTCTTGTGATGAT	-98792558	True	NA	-4	True	AGTAAA	-17	NA	98796539	98783568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98784158_98784831_98784877_98796132
WTC11_00088385	chr9	-	646	3	FSM	ENSG00000165138.18	ENST00000466120.1	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	218.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCAGCCCCACGCCCTC	-98790486	False	20	NA	False	NA	NA	NA	98790496	98783949	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98784158_98784831_98784877_98790103
WTC11_00088387	chr9	-	2808	2	FSM	ENSG00000119523.10	ENST00000476832.2	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	-99217182	True	NA	1	True	ATTAAA	-18	NA	99221942	99216424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99218837_99221546
WTC11_00088388	chr9	-	3220	3	FSM	ENSG00000119523.10	ENST00000238477.5	2966	3	-253	-1	-253	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	NA	False	NA	1	True	ATTAAA	-18	NA	99222195	99216424	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99218837_99220978_99221138_99221546
WTC11_00088390	chr9	-	444	2	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAACTTTACATTCCAG	NA	False	NA	NA	False	NA	NA	NA	99675894	99669780	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_99669897_99675566
WTC11_00088391	chr9	-	6030	2	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAACTTTACATTCCAG	NA	False	NA	NA	False	NA	NA	NA	99675894	99669780	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_99670966_99671049
WTC11_00088393	chr9	-	5357	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	-52	-497	0	497	multi-exon	FALSE	canonical	3	499	junction_3	36.643468744824	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTGGAGACTTTT	-100090553	True	NA	NA	False	AATAAA	-18	NA	100099052	99978687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
WTC11_00088394	chr9	-	7948	2	Antisense	novelGene_ENSG00000119509.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACAAGTTTATGAATT	-100144155	True	NA	NA	False	AATAAA	-16	NA	100146207	100136367	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_100144075_100145966
WTC11_00088395	chr9	-	3086	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	-9	0	2	multi-exon	FALSE	canonical	3	577	junction_12	52.3988335280666	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCTTTGCACTGAT	-100339212	True	NA	-5	True	ATTAAA	-27	NA	100352942	100302074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
WTC11_00088396	chr9	-	4764	2	FSM	ENSG00000136891.14	ENST00000477648.1	4457	2	-461	154	-461	-154	multi-exon	FALSE	canonical	3	719	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGGGCATCCCCAAG	-100308314	False	NA	NA	False	NA	NA	NA	100308330	100302239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100302305_100303631
WTC11_00088397	chr9	-	824	5	FSM	ENSG00000136891.14	ENST00000429235.1	824	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	266.285913070895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAAATCTATCAGACA	-100333574	False	NA	NA	False	NA	NA	NA	100347304	100329185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100347166
WTC11_00088398	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1170	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-101388607	True	NA	-10	True	AATAAA	-16	NA	101398618	101387632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_101390851_101398500
WTC11_00088399	chr9	-	4227	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	-2	0	2	multi-exon	FALSE	canonical	3	159	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAAGACTTTTATCAT	-101484301	True	NA	-15	True	AATAAA	-23	NA	101487173	101473167	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_101477170_101486948
WTC11_00088401	chr9	-	10396	50	FSM	ENSG00000165029.17	ENST00000374736.8	10408	50	0	12	0	-11	multi-exon	FALSE	canonical	1	3	junction_38	4.57233955937556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCTACAGAAATTTA	-104926340	True	NA	-13	True	AATAAA	-14	NA	104928155	104781017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104784456_104785395_104785640_104786297_104786391_104786872_104786977_104787919_104788055_104788425_104788568_104790921_104791029_104791935_104791999_104792785_104792907_104793170_104793301_104794386_104794511_104796052_104796198_104796308_104796425_104798420_104798599_104799818_104799989_104800509_104800585_104802053_104802160_104803283_104803317_104804625_104804721_104806240_104806431_104809465_104809565_104810799_104810925_104812573_104812723_104814117_104814232_104814426_104814476_104816142_104816346_104817331_104817405_104818662_104818884_104819585_104819724_104819926_104820070_104821374_104821507_104822495_104822668_104824464_104824579_104825682_104825888_104826947_104827170_104828915_104829139_104830924_104831102_104831621_104831828_104832573_104832772_104836979_104837097_104837427_104837568_104840278_104840520_104845476_104845570_104858521_104858699_104861678_104861801_104883038_104883158_104884426_104884569_104889101_104889196_104903613_104903772_104927934
WTC11_00088402	chr9	-	10402	50	FSM	ENSG00000165029.17	ENST00000678995.1	10413	50	0	11	0	-11	multi-exon	FALSE	canonical	0	0	junction_26	4.99470773647081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCTACAGAAATTTA	-104926340	True	NA	-13	True	AATAAA	-14	NA	104928155	104781017	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104784456_104785395_104785640_104786297_104786391_104786872_104786977_104787919_104788055_104788425_104788568_104790921_104791029_104791935_104791999_104792785_104792907_104793170_104793301_104794386_104794511_104796052_104796198_104796308_104796425_104798420_104798599_104799818_104799989_104800509_104800585_104802053_104802160_104803283_104803317_104804625_104804721_104806240_104806431_104809465_104809565_104810799_104810925_104812573_104812723_104814117_104814232_104814426_104814476_104816142_104816346_104817225_104817305_104818662_104818884_104819585_104819724_104819926_104820070_104821374_104821507_104822495_104822668_104824464_104824579_104825682_104825888_104826947_104827170_104828915_104829139_104830924_104831102_104831621_104831828_104832573_104832772_104836979_104837097_104837427_104837568_104840278_104840520_104845476_104845570_104858521_104858699_104861678_104861801_104883038_104883158_104884426_104884569_104889101_104889196_104903613_104903772_104927934
WTC11_00088403	chr9	-	10282	49	NIC	ENSG00000165029.17	novel	10408	50	NA	NA	-44	-11	combination_of_known_junctions	FALSE	canonical	1	3	junction_38	4.53530709177082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCTACAGAAATTTA	-104926384	True	NA	-13	True	AATAAA	-14	NA	104928199	104781017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_104784456_104785395_104785640_104786297_104786391_104786872_104786977_104787919_104788055_104788425_104788568_104790921_104791029_104791935_104791999_104792785_104792907_104793170_104793301_104794386_104794511_104796052_104796198_104796308_104796425_104798420_104798599_104799818_104799989_104800509_104800585_104802053_104802160_104803283_104803317_104804625_104804721_104806240_104806431_104809465_104809565_104810799_104810925_104812573_104812723_104814117_104814232_104814426_104814476_104816142_104816346_104817331_104817405_104818662_104818884_104819585_104819724_104819926_104820070_104821374_104821507_104822495_104822668_104824464_104824579_104825682_104825888_104826947_104827170_104828915_104829139_104830924_104831102_104831621_104831828_104832573_104832772_104836979_104837097_104837427_104837568_104840278_104840520_104845476_104845570_104858521_104858699_104861678_104861801_104883038_104883158_104884426_104884569_104889101_104889196_104927934
WTC11_00088406	chr9	-	2332	3	FSM	ENSG00000136826.15	ENST00000497048.5	2393	3	61	0	61	0	multi-exon	FALSE	canonical	3	16	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTTTATTGTTTTG	-107488370	False	NA	NA	False	AATAAA	-21	NA	107488386	107484851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_107485927_107487027_107487193_107487294
WTC11_00088407	chr9	-	2706	4	FSM	ENSG00000136826.15	ENST00000493306.1	2706	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	2.86744175568088	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTTTATTGTTTTG	-107489421	False	NA	NA	False	AATAAA	-21	NA	107489437	107484851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_107485927_107487027_107488268_107488929_107489051_107489167
WTC11_00088410	chr9	-	573	3	FSM	ENSG00000136826.15	ENST00000420475.1	822	3	249	0	249	0	multi-exon	FALSE	canonical	0	0	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGTCTGGCCCGGCGGGA	-107490217	True	NA	NA	False	NA	NA	NA	107490233	107488988	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_107489051_107489167_107489564_107490118
WTC11_00088411	chr9	-	5914	37	FSM	ENSG00000070061.16	ENST00000374647.10	5913	37	0	-1	0	0	multi-exon	FALSE	canonical	3	108	junction_36	32.0522817507911	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGAATTTTCCTGGACA	-108931023	True	NA	NA	False	AGTAAA	-17	NA	108934124	108867515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00088412	chr9	-	5968	37	FSM	ENSG00000070061.16	ENST00000675406.1	5879	37	-31	-58	0	36	multi-exon	FALSE	canonical	2	7	junction_36	41.61087931993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATTGAAGCAGCAAGA	-108934122	False	NA	NA	False	NA	NA	NA	108934144	108867479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931200_108933863
WTC11_00088413	chr9	-	6472	37	FSM	ENSG00000070061.16	ENST00000674948.1	5951	37	213	-734	0	94	multi-exon	FALSE	canonical	3	60	junction_36	35.9621285710124	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGACTCTGTCTCAA	-108931014	True	NA	NA	False	NA	NA	NA	108934115	108866803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
WTC11_00088414	chr9	-	2463	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	-9	0	1	multi-exon	TRUE	canonical	3	509	junction_11	66.3156499787099	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGTGATTTTTAAAAT	-109005368	True	NA	1	True	AATAAA	-27	NA	109013499	108942567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
WTC11_00088415	chr9	-	2523	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	-1	0	1	multi-exon	FALSE	canonical	3	34	junction_1	148.401659253311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGTGATTTTTAAAAT	-109005391	True	NA	1	True	AATAAA	-27	NA	109013522	108942567	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
WTC11_00088419	chr9	-	7962	17	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	226	junction_13	30.241669824102	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTCCTGTGTGTTGAA	-109115787	True	NA	-2	True	AATAAA	-33	NA	109119938	109015138	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
WTC11_00088421	chr9	-	7612	20	FSM	ENSG00000070159.14	ENST00000446349.5	8630	20	1018	0	1018	0	multi-exon	FALSE	canonical	1	4	junction_16	6.65742665298606	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGTTGACATTTTT	NA	False	NA	NA	False	TATAAA	-25	NA	109450366	109375693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810
WTC11_00088423	chr9	-	506	1	FSM	ENSG00000228053.1	ENST00000418441.1	478	1	-24	-4	-24	4	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTAAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	110025382	110024876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110024900_110025400
WTC11_00088427	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7766	junction_4	217.071992666028	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	-110208292	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
WTC11_00088428	chr9	-	3822	6	FSM	ENSG00000198121.15	ENST00000683809.1	3818	6	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_4	13.0782261794175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAATGTGTGGTTCTGG	-111038441	True	NA	-5	True	AATAAA	-18	NA	111038470	110873258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110875723_110941420_110942169_110972072_110972221_110973480_110973559_111036121_111036202_111038166
WTC11_00088429	chr9	-	3573	5	NNC	ENSG00000198121.15	novel	3637	5	NA	NA	-316	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	7.64852927038918	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAATGTGTGGTTCTGG	-111038772	False	NA	-5	True	AATAAA	-18	NA	111038786	110873258	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_110875723_110941420_110942169_110972072_110972221_110973480_110973559_111038651
WTC11_00088430	chr9	-	1019	4	FSM	ENSG00000198121.15	ENST00000441240.1	1019	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	7.93025150224688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGCTGGAACTGTAT	-111038444	False	NA	NA	False	NA	NA	NA	111038458	110941667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110942169_110972072_110972221_110973480_110973559_111038166
WTC11_00088431	chr9	-	7085	49	FSM	ENSG00000136813.15	ENST00000338205.9	7078	49	0	-7	0	0	multi-exon	TRUE	canonical	3	257	junction_48	92.5094003294019	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTTGTGTGTGTA	-111474142	True	NA	2	True	AATAAA	-28	NA	111484357	111360684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111484115
WTC11_00088432	chr9	-	7215	50	FSM	ENSG00000136813.15	ENST00000684092.1	7215	50	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_49	118.858264179505	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTTGTGTGTGTA	-111474168	True	NA	2	True	AATAAA	-28	NA	111484383	111360684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111472896_111473001_111484115
WTC11_00088433	chr9	-	5784	50	NIC	ENSG00000136813.15	novel	7215	50	NA	NA	138	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_49	121.898654487437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCCTTATTAGCTTT	-111483482	False	NA	-14	True	AATAAA	-17	NA	111483541	111361885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111472896_111473001_111483503
WTC11_00088434	chr9	-	6046	49	NIC	ENSG00000136813.15	novel	7078	49	NA	NA	150	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_48	105.656132410628	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCCTTATTAGCTTT	-111483848	False	NA	-14	True	AATAAA	-17	NA	111483907	111361885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111483503
WTC11_00088437	chr9	-	1757	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	-169	11	0	-1	multi-exon	FALSE	canonical	3	84	junction_9	103.618960083997	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTAGCCGGGCGTGGTGGC	-111599764	False	NA	NA	False	AATAAA	-23	NA	111599816	111562577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
WTC11_00088438	chr9	-	1882	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	57	2	-1	-2	multi-exon	FALSE	canonical	3	38	junction_1	159.076836780218	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTAGCCGGGCGTGGTGG	-111599784	False	NA	NA	False	AATAAA	-22	NA	111599836	111562578	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
WTC11_00088439	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	45.9720795566769	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	-111596475	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
WTC11_00088440	chr9	-	847	4	FSM	ENSG00000106853.20	ENST00000374308.1	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	51.227162933567	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGTATACAGAGATAAG	-111596475	True	NA	NA	False	NA	NA	NA	111599407	111592366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599338
WTC11_00088441	chr9	-	1595	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	-16	-518	3	518	multi-exon	FALSE	canonical	3	84	junction_3	167.572869721404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTGTAAAAATTCAAATA	-111599570	True	NA	-46	True	NA	NA	NA	111599832	111591779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
WTC11_00088443	chr9	-	3102	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	-85	-2	-85	2	multi-exon	FALSE	canonical	2	7	junction_5	4.08837911035657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTCCCTTGGTTAAT	-112174985	True	NA	1	True	AGTAAA	-19	NA	112175382	112040780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
WTC11_00088444	chr9	-	7882	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	-86	-5041	0	96	multi-exon	FALSE	canonical	3	42	junction_11	64.2527020616427	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGTTATAACCATCAT	-112319835	True	NA	NA	False	TATAAA	-34	NA	112333664	112217619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
WTC11_00088445	chr9	-	7957	14	FSM	ENSG00000119314.16	ENST00000458258.5	7995	14	38	0	38	0	multi-exon	FALSE	canonical	3	6	junction_13	85.2917721150906	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGCATTTTTATCAG	-112319159	False	13829	NA	False	AATAAA	-12	NA	112332988	112217715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112332783
WTC11_00088446	chr9	-	7990	15	FSM	ENSG00000119314.16	ENST00000334318.10	7990	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	93.3026674597358	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGCATTTTTATCAG	-112319835	True	NA	NA	False	AATAAA	-12	NA	112333664	112217715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112330440_112330475_112333469
WTC11_00088447	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	46.9637906597848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	-112319790	True	NA	-3	True	AATAAA	-28	NA	112333619	112218434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
WTC11_00088448	chr9	-	7245	14	NIC	ENSG00000119314.16	novel	7192	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	60.8257770022627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	-112319852	True	NA	-3	True	AATAAA	-28	NA	112333681	112218434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112333469
WTC11_00088450	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	13.8021737418423	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-112716959	True	NA	0	True	AATAAA	-31	NA	112718117	112683925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
WTC11_00088451	chr9	-	894	5	FSM	ENSG00000148153.14	ENST00000481146.6	879	5	0	-15	0	0	multi-exon	FALSE	canonical	3	9	junction_3	70.104832215761	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-112716928	True	NA	10	True	AATGAA	-27	NA	112718086	112687116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112694130_112694234_112701787_112701881_112716460_112716542_112717986
WTC11_00088452	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	84.581321815162	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-112716991	True	NA	10	True	AATGAA	-27	NA	112718149	112687116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
WTC11_00088453	chr9	-	713	3	FSM	ENSG00000148153.14	ENST00000374234.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAATAGGCTTAAATCAA	-112716949	True	NA	-18	True	AAGAAA	-22	NA	112718107	112687144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112694130_112694234_112717986
WTC11_00088455	chr9	-	11505	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	-9091	0	9091	multi-exon	FALSE	canonical	3	120	junction_1	38.0090449761632	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCAGCCAGGT	-113008633	True	NA	95	True	NA	NA	NA	113012227	112988028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
WTC11_00088456	chr9	-	6230	4	FSM	ENSG00000136866.14	ENST00000374227.8	6277	4	0	47	0	-47	multi-exon	FALSE	canonical	3	19	junction_1	2.62466929133727	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTGTAGCATCTAAAATA	-113055546	True	NA	NA	False	AATAAA	-38	NA	113056724	113038423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113044269_113049361_113049497_113049790_113049873_113056556
WTC11_00088457	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.59966329107444	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	-113055581	True	NA	NA	False	NA	NA	NA	113056759	113042240	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
WTC11_00088458	chr9	-	312	1	FSM	ENSG00000285115.1	ENST00000645617.1	422	1	273	-163	273	163	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGCCCCGCCCCACTT	NA	False	NA	NA	False	NA	NA	NA	113060234	113059922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113059900_113060200
WTC11_00088459	chr9	-	8789	28	FSM	ENSG00000119321.10	ENST00000446284.6	8807	28	12	6	3	-6	multi-exon	FALSE	canonical	3	35	junction_18	10.4739535851418	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATCAAGTGCTTATTA	-113220154	True	NA	-5	True	AATAAA	-12	NA	113221306	113161011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
WTC11_00088460	chr9	-	2815	14	FSM	ENSG00000119321.10	ENST00000414250.2	2815	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	8.11091747267353	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGAAAAATGTGAACAAA	-113220166	True	NA	NA	False	NA	NA	NA	113221318	113186435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
WTC11_00088461	chr9	-	653	2	ISM	ENSG00000119321.10	ENST00000493847.2	2983	4	14007	2101	4296	916	3prime_fragment	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCCATAAGGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	113207296	113206010	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_113206579_113207211
WTC11_00088463	chr9	-	878	5	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	21355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	515.178124535582	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCAGGAGCGGTGGTT	-113261617	True	NA	NA	False	NA	NA	NA	113275572	113234479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113234509_113267013_113267440_113272426_113272549_113273328_113273439_113275381
WTC11_00088464	chr9	-	850	5	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	21355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	615.544880573301	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCAGGAGCGGTGGTT	-113261617	True	NA	NA	False	NA	NA	NA	113275572	113234479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113234509_113267013_113267440_113272426_113272549_113273328_113273411_113275381
WTC11_00088465	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	225.04271199535	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261617	True	NA	-50	True	AATAAA	-33	NA	113275572	113266991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
WTC11_00088466	chr9	-	2330	2	FSM	ENSG00000119431.10	ENST00000238379.9	1834	2	-469	-27	281	27	multi-exon	FALSE	canonical	3	70	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCACACCTGTGTCCCT	-113375864	False	NA	21	True	NA	NA	NA	113376644	113373391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113374530_113375452
WTC11_00088467	chr9	-	1384	3	FSM	ENSG00000119431.10	ENST00000485934.1	913	3	0	-471	0	2	multi-exon	FALSE	canonical	3	30	junction_2	20	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGCCTCTGCCCTCCCT	-113376145	True	NA	-4	True	AATAAA	-42	NA	113376925	113373416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113374530_113375452_113375527_113376728
WTC11_00088468	chr9	-	1511	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	-30	0	27	multi-exon	FALSE	canonical	3	26	junction_2	22	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCACACCTGTGTCCCT	-113376206	True	NA	21	True	NA	NA	NA	113376986	113373391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113374530_113375452_113375568_113376728
WTC11_00088469	chr9	-	2132	5	Fusion	ENSG00000119431.10_ENSG00000148229.13	novel	2194	5	NA	NA	0	-2131	multi-exon	FALSE	non_canonical	0	0	junction_1	165.19987893458	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCTTAGCTGTGCCAA	-113405430	True	NA	NA	False	AAAAAG	-29	NA	113410350	113376018	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_113376074_113407234_113408984_113409609_113409729_113410054_113410141_113410227
WTC11_00088470	chr9	-	3255	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	-8	0	1	multi-exon	FALSE	canonical	3	7	junction_10	23.9900116956417	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTGAATGTCTTGTT	-113401228	False	NA	-4	True	AATAAA	-44	NA	113401243	113386310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
WTC11_00088471	chr9	-	3130	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	-1	0	1	multi-exon	FALSE	canonical	3	73	junction_5	8.45112345213971	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTGAATGTCTTGTT	-113401269	False	4920	-4	True	AATAAA	-44	NA	113401284	113386310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
WTC11_00088472	chr9	-	936	7	FSM	ENSG00000148218.16	ENST00000468504.5	851	7	-85	0	-53	0	multi-exon	FALSE	canonical	3	73	junction_1	8.76863095864394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATGGCCCTTTCCGGT	-113401328	False	4920	NA	False	NA	NA	NA	113401343	113389790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
WTC11_00088474	chr9	-	2119	4	FSM	ENSG00000148229.13	ENST00000374169.7	2109	4	0	-10	0	10	multi-exon	FALSE	canonical	3	356	junction_3	16.9705627484771	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGCTGCTTGTTCA	-113405462	True	NA	6	True	AATAAA	-26	NA	113410382	113407224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227
WTC11_00088475	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	161.318590063266	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113410660	False	NA	-4	True	AATAAA	-16	NA	113410675	113407234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
WTC11_00088476	chr9	-	2516	3	FSM	ENSG00000148229.13	ENST00000475080.1	455	3	-352	-1709	-27	0	multi-exon	FALSE	canonical	3	392	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113410687	False	NA	-4	True	AATAAA	-16	NA	113410702	113407234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113408984_113409609_113409729_113410054
WTC11_00088477	chr9	-	1340	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	-80	2	-52	-2	multi-exon	TRUE	canonical	2	3	junction_8	2.29868454061969	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTGTCCTCATTGTT	-114078274	False	NA	0	True	AATAAA	-22	NA	114078380	114060128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
WTC11_00088480	chr9	-	4077	12	FSM	ENSG00000095397.16	ENST00000362057.4	4070	12	0	-7	0	7	multi-exon	FALSE	canonical	3	57	junction_8	6.62576987574131	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGTGTGGTTTACCT	-114503990	True	NA	1	True	AATAAA	-26	NA	114505473	114402072	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183
WTC11_00088481	chr9	-	2306	10	FSM	ENSG00000095397.16	ENST00000674036.8	2306	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	20.2983913490213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTGTATTTATATACAG	NA	False	NA	-71	True	NA	NA	NA	114478572	114402144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552
WTC11_00088484	chr9	-	4008	18	NIC	ENSG00000041982.16	novel	8500	28	NA	NA	-95	27	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	5.58296965539043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATTTTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	115073867	115020532	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115046409_115046683_115057152_115057426_115059729_115060003_115062916_115063190_115063795_115064069_115064646_115064920_115073602
WTC11_00088486	chr9	-	6786	23	FSM	ENSG00000148219.18	ENST00000313400.9	6878	23	0	92	0	-92	multi-exon	FALSE	canonical	2	12	junction_11	26.465984718265	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACTGTGAGTCTTGGG	-117414748	True	NA	NA	False	NA	NA	NA	117415057	116423203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975346_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117141325_117141479_117214357_117214743_117291325_117291514_117414496
WTC11_00088487	chr9	-	1763	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	3	junction_1	26.4338797757726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686226	True	NA	-5	True	ATTAAA	-18	NA	116687240	116425227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
WTC11_00088488	chr9	-	3812	21	FSM	ENSG00000148219.18	ENST00000373986.7	3812	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	27.2699468279643	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	117214553	116425227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975334_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117141325_117141479_117214357
WTC11_00088489	chr9	-	4622	22	FSM	ENSG00000148219.18	ENST00000361209.6	4622	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	27.3483449734918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-117414761	True	NA	-5	True	ATTAAA	-18	NA	117415070	116425227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975346_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117214357_117214743_117291325_117291514_117414496
WTC11_00088490	chr9	-	384	1	FSM	ENSG00000230734.1	ENST00000431607.1	468	1	78	6	78	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATACTCCAGATCA	NA	False	NA	NA	False	AATAAA	-27	NA	117181017	117180633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_117180600_117181000
WTC11_00088491	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	8.87095696929144	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	-119368034	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
WTC11_00088492	chr9	-	5992	37	FSM	ENSG00000136861.19	ENST00000360190.8	5985	37	1	-8	1	7	multi-exon	FALSE	canonical	3	16	junction_6	30.0941295903781	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTTGTTTTGTGTGG	-120577397	True	NA	0	True	ATTAAA	-25	NA	120580157	120388867	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
WTC11_00088493	chr9	-	6231	38	FSM	ENSG00000136861.19	ENST00000349780.9	6232	38	5	-4	-3	4	multi-exon	FALSE	canonical	3	26	junction_31	28.9636178926546	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGATTCTGTTGTTTTGTG	-120577402	True	NA	-3	True	ATTAAA	-22	NA	120580162	120388870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
WTC11_00088495	chr9	-	3905	23	ISM	ENSG00000136861.19	ENST00000687311.1	6000	36	93545	314	-1621	0	3prime_fragment	FALSE	canonical	3	8	junction_19	28.4371497798796	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACGCTGTCTCTTTGTT	-120477333	False	NA	-10	True	AATAAA	-21	NA	120477354	120389194	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120467859_120467998_120470110_120470221_120471747_120471879_120477349
WTC11_00088496	chr9	-	4034	24	FSM	ENSG00000136861.19	ENST00000483412.5	6235	24	0	2201	0	-2201	multi-exon	FALSE	canonical	3	8	junction_12	22.9313102667118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGAGGCCCTTCTCACC	-120536414	True	NA	NA	False	NA	NA	NA	120536437	120408346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371
WTC11_00088498	chr9	-	9130	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	12	0	-12	multi-exon	FALSE	canonical	3	73	junction_7	43.3843760083357	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAACCCAAGACATGCG	-120785859	True	NA	-10	True	AATAAA	-38	NA	120793416	120756985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
WTC11_00088499	chr9	-	588	1	FSM	ENSG00000270917.1	ENST00000603920.1	371	1	-161	-56	-161	56	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCCAAGCAAATATCAG	-120812995	False	NA	NA	False	NA	NA	NA	120813006	120812418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120812400_120813000
WTC11_00088500	chr9	-	569	4	FSM	ENSG00000095261.14	ENST00000373920.6	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	225.758474677893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGCACTAAACTGGG	NA	False	NA	NA	False	CATAAA	-20	NA	120824518	120815495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120815789_120820838_120820980_120821354_120821465_120824493
WTC11_00088501	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	67.1284010104682	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	-120835406	True	NA	19	True	AATAAA	-35	NA	120842922	120816052	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
WTC11_00088503	chr9	-	569	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	-2	0	2	multi-exon	FALSE	canonical	3	565	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTAAACCCCTTTCAT	-120835366	True	NA	NA	False	AATAAA	-16	NA	120842882	120831667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120831946_120833311_120833457_120842736
WTC11_00088505	chr9	-	850	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	-14	0	14	multi-exon	FALSE	canonical	3	91	junction_2	11.2333209693305	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTAATTGTTGCCTTT	-120875961	True	NA	-20	True	AATAAA	-41	NA	120877188	120869572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
WTC11_00088506	chr9	-	4158	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	-9	0	9	multi-exon	FALSE	canonical	3	396	junction_5	38.386859996725	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCTCTGTATTATTA	-121198395	True	NA	NA	False	AATAAA	-28	NA	121201869	121178123	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
WTC11_00088507	chr9	-	202	1	FSM	ENSG00000235865.2	ENST00000414544.1	4763	1	4305	256	4305	-256	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTCCCTACTGACAG	NA	False	NA	NA	False	NA	NA	NA	121281225	121281023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121281000_121281200
WTC11_00088508	chr9	-	3057	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	88	0	-87	multi-exon	FALSE	canonical	3	339	junction_5	11.8836956466506	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGGGTGAGAGTCTGT	-121366642	True	NA	-13	True	AATAAA	-22	NA	121370250	121339074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
WTC11_00088509	chr9	-	323	2	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCACTTCTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	121796746	121790105	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_121790244_121796561
WTC11_00088511	chr9	-	604	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	766.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141649	True	NA	-12	True	ATTAAA	-15	NA	122159743	122144057	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_122144379_122148111_122148278_122159626
WTC11_00088512	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1511	junction_2	52.6181210864343	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141685	True	NA	-12	True	ATTAAA	-15	NA	122159779	122144057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
WTC11_00088514	chr9	-	4896	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	81	0	-81	multi-exon	FALSE	canonical	3	319	junction_3	22.6503863101714	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGGAAATGTGTTTTC	-122261860	True	NA	NA	False	NA	NA	NA	122264840	122237702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
WTC11_00088515	chr9	-	889	7	FSM	ENSG00000119446.14	ENST00000483428.1	889	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	168.482442210853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTTGGATGTTCT	-122261814	True	NA	-119	True	NA	NA	NA	122264794	122241757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122254273_122254368_122261379_122261509_122264714
WTC11_00088517	chr9	-	3897	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	-880	0	880	multi-exon	FALSE	canonical	3	338	junction_1	26.5120517668642	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGATCACCTGCCTCG	-122824413	True	NA	NA	False	NA	NA	NA	122828588	122817216	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
WTC11_00088518	chr9	-	3903	3	NIC	ENSG00000136940.14	novel	3017	4	NA	NA	0	880	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGATCACCTGCCTCG	-122824413	True	NA	NA	False	NA	NA	NA	122828588	122817216	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_122820820_122823015_122823198_122828470
WTC11_00088520	chr9	-	9133	20	FSM	ENSG00000056586.16	ENST00000373670.5	9248	20	115	0	115	0	multi-exon	FALSE	canonical	3	38	junction_3	21.9628242940094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGTTTAATGTCAAT	-122897969	False	NA	1	True	AATAAA	-21	NA	122897995	122844555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122849823_122851080_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278
WTC11_00088521	chr9	-	8954	21	FSM	ENSG00000056586.16	ENST00000357244.7	8964	21	12	-2	-6	2	multi-exon	TRUE	canonical	3	38	junction_3	24.9777901344374	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTAATGTCAATAT	-122902712	True	NA	3	True	AATAAA	-23	NA	122905347	122844553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122849823_122851080_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00088522	chr9	-	3572	18	FSM	ENSG00000056586.16	ENST00000423239.6	3623	18	0	51	0	-22	multi-exon	FALSE	canonical	3	56	junction_2	21.6834732084282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTAAATAATTCTTT	-122902706	True	NA	-1	True	AATAAA	-13	NA	122905341	122853795	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00088523	chr9	-	1611	3	FSM	ENSG00000056586.16	ENST00000471874.2	749	3	0	-862	0	861	multi-exon	FALSE	canonical	3	110	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTATAACCTGTGAG	-122897508	False	NA	NA	False	AATAAA	-35	NA	122897534	122889308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122890546_122892908_122893027_122897278
WTC11_00088524	chr9	-	1023	4	ISM	ENSG00000056586.16	ENST00000335387.9	3081	10	-126	16385	0	0	5prime_fragment	FALSE	canonical	3	110	junction_2	13.9124245031395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTATTGCTGTTT	-122902706	True	NA	-11	True	ATTAAA	-18	NA	122905341	122890170	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00088525	chr9	-	4101	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	6	-8	6	8	multi-exon	FALSE	canonical	3	18	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCTTCATCTTTGA	-122912331	True	NA	4	True	AATAAA	-26	NA	122913317	122908047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122912082_122913250
WTC11_00088526	chr9	-	4464	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	-9	0	9	multi-exon	FALSE	canonical	3	14	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGTTATTTTCTCACT	-122930890	True	NA	NA	False	AATAAA	-25	NA	122931512	122915556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122919945_122931436
WTC11_00088528	chr9	-	3339	19	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	0	30361	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	150.596796319604	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGGCAAATTCAAGCAG	-123257308	True	NA	NA	False	AATAAA	-10	NA	123268586	123079138	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123079257_123124709_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
WTC11_00088530	chr9	-	6003	1	FSM	ENSG00000236901.6	ENST00000449175.1	5984	1	0	-19	0	19	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCCACTGATAAAATGA	-123115467	False	NA	17	True	AAAACA	-43	NA	123115477	123109474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123109500_123115500
WTC11_00088532	chr9	-	6451	19	FSM	ENSG00000165209.19	ENST00000348403.10	6451	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	182.612970277525	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAATATTATGGT	-123257308	True	NA	NA	False	AATAGA	-20	NA	123268586	123121616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236967_123268435
WTC11_00088533	chr9	-	3160	17	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-4	331	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	147.457621030586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTTCTTGTGGCCT	-123257290	True	NA	-3	True	AATAAA	-18	NA	123268568	123124707	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123125674_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
WTC11_00088534	chr9	-	3224	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	2	334	combination_of_known_junctions	FALSE	canonical	3	539	junction_15	57.109013705078	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTCTTGTGGCCTTCT	-123257306	True	NA	0	True	AATAAA	-21	NA	123268584	123124704	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
WTC11_00088535	chr9	-	5010	22	FSM	ENSG00000119522.17	ENST00000373624.6	5010	22	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	14.0359111824309	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCATCCCCGTGTCCTTG	-123930070	False	NA	-6	True	AATAAA	-19	NA	123930107	123379653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123382626_123383654_123383914_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
WTC11_00088536	chr9	-	3615	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	-3	0	3	multi-exon	FALSE	canonical	3	19	junction_1	18.8586187193018	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTACTTCCATTACTAT	-123928875	True	NA	NA	False	ACTAAA	-16	NA	123930126	123400095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
WTC11_00088538	chr9	-	1020	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	71985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGACATGGAAAGTAGCT	-124392443	True	NA	NA	False	AAAAAG	-8	NA	124415442	124281479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124281519_124353467_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088539	chr9	-	1015	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	71985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGACATGGAAAGTAGCT	-124392443	True	NA	NA	False	AAAAAG	-8	NA	124415442	124281479	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124281518_124353471_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088540	chr9	-	1009	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	14444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGATGGGGCTGGAGAG	-124392443	True	NA	NA	False	NA	NA	NA	124415442	124339020	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124339048_124353466_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088542	chr9	-	1005	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	14444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGATGGGGCTGGAGAG	-124392443	True	NA	NA	False	NA	NA	NA	124415442	124339020	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124339047_124353469_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088543	chr9	-	1004	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	14444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGATGGGGCTGGAGAG	-124392443	True	NA	NA	False	NA	NA	NA	124415442	124339020	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124339046_124353469_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088544	chr9	-	975	8	NNC	ENSG00000136930.13	novel	984	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_2	704.20750072804	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-124392437	True	NA	-4	True	AATAAA	-27	NA	124415436	124353464	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124353710_124356763_124356913_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088545	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_2	94.3616577269581	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-124392443	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00088547	chr9	-	9158	10	FSM	ENSG00000231149.2_ENSG00000148200.17	ENST00000487099.7	7065	10	0	-2093	0	-244	multi-exon	FALSE	canonical	3	35	junction_5	11.3278854008293	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTCTGTGCTGAGTA	-124751196	True	NA	NA	False	AATAAA	-20	NA	124771311	124515181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
WTC11_00088548	chr9	-	1846	10	FSM	ENSG00000148200.17	ENST00000344523.8	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	16.9756543174681	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCAATGCATTTTCTT	-124751172	True	NA	NA	False	NA	NA	NA	124771287	124522466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
WTC11_00088552	chr9	-	494	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	-1	0	1	multi-exon	FALSE	canonical	3	97	junction_2	13803.3373930908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCCTGGCACTTCCA	-124656704	True	NA	-13	True	AATAAA	-21	NA	124861915	124857878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
WTC11_00088554	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	28114	junction_1	1539	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656725	True	NA	-17	True	AATAAA	-17	NA	124861936	124857882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124860182_124860265_124861418
WTC11_00088555	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_3	3348.45300930976	4471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656746	True	NA	-17	True	AATAAA	-17	NA	124861957	124857882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
WTC11_00088557	chr9	-	649	2	FSM	ENSG00000136942.15	ENST00000495728.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTAGTCCCAGCTAC	-124656770	True	NA	NA	False	NA	NA	NA	124861981	124860978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124861556_124861909
WTC11_00088558	chr9	-	4803	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	74	0	29	multi-exon	FALSE	canonical	3	33	junction_22	8.63492811035937	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGTGTCAGTATTTC	-124940021	True	NA	1	True	ATTAAA	-39	NA	124941083	124878348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
WTC11_00088559	chr9	-	4934	23	NNC	ENSG00000136935.14	novel	4877	23	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_22	9.565455236647	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGTGTCAGTATTTC	-124940021	True	NA	1	True	ATTAAA	-39	NA	124941083	124878348	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940839
WTC11_00088561	chr9	-	12112	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_4	12.2352941176471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTACTTTTTCGGTA	-125141700	True	NA	1	True	AATAAA	-17	NA	125143528	124942606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
WTC11_00088562	chr9	-	686	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52298	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	15.2534149181967	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGCTTGTACTTTTG	-125141678	True	NA	-13	True	AATAAA	-22	NA	125143506	125052208	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
WTC11_00088564	chr9	-	4100	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	3	0	-2	multi-exon	FALSE	canonical	3	384	junction_2	12.6809130410848	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTTGCTTGACTGG	-125185295	True	NA	-4	True	ATTAAA	-15	NA	125189803	125146575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
WTC11_00088565	chr9	-	4347	8	FSM	ENSG00000119414.12	ENST00000451402.5	4349	8	0	2	0	-2	multi-exon	FALSE	canonical	2	3	junction_7	180.195811861	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTTGCTTGACTGG	NA	False	NA	-4	True	ATTAAA	-15	NA	125189939	125146575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125188918_125188948_125189561
WTC11_00088566	chr9	-	4263	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	-93	2	-93	-2	multi-exon	FALSE	canonical	3	22	junction_4	154.519125029881	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTTGCTTGACTGG	NA	False	NA	-4	True	ATTAAA	-15	NA	125190032	125146575	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
WTC11_00088567	chr9	-	2559	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2002.19741783871	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTGAGGGAGAGACATA	-125160051	True	NA	NA	False	NA	NA	NA	125241342	125164218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164245_125236239_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088568	chr9	-	2553	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2002.19741783871	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTGAGGGAGAGACATA	-125160051	True	NA	NA	False	NA	NA	NA	125241342	125164218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164244_125236244_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088569	chr9	-	2559	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2002.19741783871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTGAGGGAGAGACATA	-125160051	True	NA	NA	False	NA	NA	NA	125241342	125164218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164246_125236240_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088570	chr9	-	4939	5	FSM	ENSG00000044574.9	ENST00000680640.1	4929	5	0	-10	0	3	multi-exon	FALSE	canonical	3	5668	junction_4	181.938691596922	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGATGTCTATAGTT	-125160051	True	NA	-24	True	ATTAAA	-18	NA	125241342	125234849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125240310_125240675
WTC11_00088571	chr9	-	4927	6	FSM	ENSG00000044574.9	ENST00000681774.1	4919	6	0	-8	0	1	multi-exon	FALSE	canonical	3	5869	junction_5	337.610781818354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTGATGTCTATAG	-125160053	True	NA	-26	True	ATTAAA	-16	NA	125241344	125234851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125240908_125241004
WTC11_00088572	chr9	-	5410	3	FSM	ENSG00000044574.9	ENST00000680494.1	5402	3	0	-8	0	1	multi-exon	FALSE	canonical	3	5869	junction_2	155.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTGATGTCTATAG	-125160053	True	NA	-26	True	ATTAAA	-16	NA	125241344	125234851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125240908_125241004
WTC11_00088573	chr9	-	4291	7	FSM	ENSG00000044574.9	ENST00000679475.1	4281	7	0	-10	0	3	multi-exon	FALSE	canonical	3	5278	junction_5	439.937495560449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGATGTCTATAGTT	-125160053	True	NA	-24	True	ATTAAA	-18	NA	125241344	125234849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240908_125241004
WTC11_00088575	chr9	-	4868	6	FSM	ENSG00000044574.9	ENST00000681045.1	4858	6	0	-10	0	3	multi-exon	FALSE	canonical	3	5668	junction_4	163.606112355254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGATGTCTATAGTT	-125160077	True	NA	-24	True	ATTAAA	-18	NA	125241368	125234849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125240310_125240675_125240908_125241004
WTC11_00088576	chr9	-	4038	7	FSM	ENSG00000044574.9	ENST00000681544.1	4028	7	0	-10	0	3	multi-exon	FALSE	canonical	3	5278	junction_4	454.811926942213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGATGTCTATAGTT	-125160077	True	NA	-24	True	ATTAAA	-18	NA	125241368	125234849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088577	chr9	-	4587	7	FSM	ENSG00000044574.9	ENST00000681675.1	4577	7	0	-10	0	3	multi-exon	FALSE	canonical	3	5668	junction_5	351.297594640214	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGATGTCTATAGTT	-125160077	True	NA	-24	True	ATTAAA	-18	NA	125241368	125234849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125240310_125240675_125240908_125241004
WTC11_00088580	chr9	-	3237	7	FSM	ENSG00000044574.9	ENST00000680234.1	3221	7	0	-16	0	0	multi-exon	FALSE	canonical	3	5278	junction_4	442.516164174322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGACTCAGGAACTT	-125160091	True	NA	NA	False	AAAAAG	-42	NA	125241382	125236561	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088582	chr9	-	3919	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	2	0	-2	multi-exon	FALSE	canonical	3	5278	junction_5	421.681618943845	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTGTCTGATGTCTA	-125160052	True	NA	-29	True	ATTAAA	-13	NA	125241343	125234854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00088583	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	143.058589396093	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690170	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
WTC11_00088584	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	172.37610234936	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690175	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
WTC11_00088585	chr9	-	3045	11	FSM	ENSG00000119487.17	ENST00000373503.7	3045	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	273.449465166784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690179	True	NA	NA	False	AATAAA	-18	NA	125707212	125437393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125706970
WTC11_00088586	chr9	-	3251	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	1	0	0	multi-exon	FALSE	canonical	3	31	junction_3	267.553658169721	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690198	True	NA	NA	False	AATAAA	-18	NA	125707231	125437393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
WTC11_00088587	chr9	-	1787	9	NIC	ENSG00000119487.17	novel	3045	11	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	178	junction_8	254.546164771736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTCTTTGGGGCGGAGG	-125690179	True	NA	7	True	AATAAA	-34	NA	125707212	125438453	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
WTC11_00088589	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.225909926031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-125690198	True	NA	2	True	AATAAA	-22	NA	125707231	125521467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
WTC11_00088592	chr9	-	3459	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	-16	0	16	multi-exon	FALSE	canonical	3	18	junction_3	2.1650635094611	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTTACTGTTTTAGA	-127121657	True	NA	1	True	AATAAA	-31	NA	127122635	127087331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
WTC11_00088595	chr9	-	929	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	-65	0	65	multi-exon	FALSE	canonical	3	289	junction_6	3616.3224260136	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAACCTGTGGAGAAG	-127372243	True	NA	60	True	NA	NA	NA	127451405	127447608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
WTC11_00088596	chr9	-	699	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	-65	0	65	multi-exon	FALSE	canonical	3	3600	junction_1	2119.74490734669	5378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAACCTGTGGAGAAG	-127372244	True	NA	60	True	NA	NA	NA	127451406	127447608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
WTC11_00088597	chr9	-	2276	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	-1	0	1	multi-exon	FALSE	canonical	3	9090	junction_3	303.930182041132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGATTTTCTGGTGTGGCG	-127372243	True	NA	-10	True	AATAAA	-18	NA	127451405	127447678	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
WTC11_00088599	chr9	-	4009	14	FSM	ENSG00000136830.12	ENST00000373312.4	3942	14	-67	0	-64	0	multi-exon	FALSE	canonical	3	86	junction_9	12.6724786832068	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTGCCTTGAGTGGTG	-127566479	True	NA	-6	True	AATAAA	-14	NA	127569140	127505342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127507432_127507866_127507979_127508092_127508201_127508421_127508539_127508975_127509132_127510145_127510334_127516856_127517020_127517111_127517217_127517825_127517942_127523678_127523847_127525057_127525164_127527193_127527323_127531647_127531779_127568819
WTC11_00088600	chr9	-	1737	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	9	-784	-3	470	multi-exon	FALSE	canonical	3	138	junction_3	7.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGGGAGGGGGCCG	-127714077	True	NA	NA	False	NA	NA	NA	127715654	127713022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
WTC11_00088601	chr9	-	1637	4	FSM	ENSG00000187024.15	ENST00000414832.2	569	4	-23	-1045	-3	470	multi-exon	FALSE	canonical	2	12	junction_2	63.4052223576436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGGGAGGGGGCCG	-127714077	True	NA	NA	False	NA	NA	NA	127715654	127713022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714283_127714378_127714425_127714974_127715195_127715543
WTC11_00088602	chr9	-	645	5	FSM	ENSG00000187024.15	ENST00000456267.5	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTGGGGGTGACT	-127714027	True	NA	-47	True	NA	NA	NA	127715604	127713971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714190_127714378_127714425_127714602_127714703_127714974_127715195_127715543
WTC11_00088604	chr9	-	1371	4	FSM	ENSG00000160404.18	ENST00000336067.10	1370	4	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_1	23.6267268622258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGACTTTTA	-127734238	True	NA	-7	True	AATAAA	-20	NA	127735292	127731522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127732279_127733384_127733561_127734298_127734565_127735119
WTC11_00088605	chr9	-	1520	5	FSM	ENSG00000160404.18	ENST00000373284.10	1500	5	-19	-1	0	1	multi-exon	FALSE	canonical	3	64	junction_3	5.80409338312195	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGACTTTTA	-127734259	True	NA	-7	True	AATAAA	-20	NA	127735313	127731522	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298_127734565_127735119
WTC11_00088612	chr9	-	2950	15	FSM	ENSG00000106991.14	ENST00000373203.9	2946	15	0	-4	0	1	multi-exon	FALSE	canonical	3	8	junction_12	6.12622332639759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGGGCTGGGAGAAGG	-127854481	True	NA	1	True	AATAAA	-21	NA	127854658	127815011	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825694_127825861_127826509_127826673_127829686_127829828_127843093_127843246_127854288
WTC11_00088614	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	17.1310309737103	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-127875280	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
WTC11_00088617	chr9	-	2545	7	FSM	ENSG00000160408.16	ENST00000373146.6	2410	7	0	-135	0	135	multi-exon	FALSE	canonical	3	189	junction_5	87.8230544270062	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTTTTGCATCTTG	-127896638	True	NA	NA	False	AGTAAA	-39	NA	127899603	127885185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
WTC11_00088618	chr9	-	2448	7	FSM	ENSG00000160408.16	ENST00000373142.5	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	135.733091846544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896681	True	NA	-11	True	AATAAA	-16	NA	127899646	127885321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
WTC11_00088619	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	85.5789693791646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896690	True	NA	-11	True	AATAAA	-16	NA	127899655	127885321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
WTC11_00088620	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	126.399828586382	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	-127896609	True	NA	-15	True	AATAAA	-12	NA	127899574	127885325	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
WTC11_00088623	chr9	-	666	4	ISM	ENSG00000160408.16	ENST00000373146.6	2410	7	2	8950	2	251	5prime_fragment	FALSE	canonical	3	189	junction_2	117.303973599458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTCTGTTTTCACTG	-127896636	True	NA	-16	True	NA	NA	NA	127899601	127894270	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_127894692_127896241_127896333_127897955_127898011_127899502
WTC11_00088625	chr9	-	1713	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	-7	0	7	multi-exon	FALSE	canonical	3	103	junction_5	10.2254584249314	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCGTGGTCATGTGTCT	-127915076	True	NA	-3	True	NA	NA	NA	127917041	127907878	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
WTC11_00088631	chr9	-	2180	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	-4	0	4	multi-exon	FALSE	canonical	2	7	junction_9	27.177514307799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGCCCTCTGCTGGTA	-127924431	False	6346	-2	True	ATTAAA	-23	NA	127930777	127920876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
WTC11_00088634	chr9	-	1663	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	-1	0	1	multi-exon	FALSE	canonical	3	622	junction_2	416	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGCCGTGTTTACC	-127931480	True	NA	-5	True	AATAAA	-17	NA	127937826	127935097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127935781_127936552_127937524_127937817
WTC11_00088635	chr9	-	913	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	-1	0	1	multi-exon	FALSE	canonical	3	622	junction_3	357.125561485966	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGCCGTGTTTACC	-127931508	True	NA	-5	True	AATAAA	-17	NA	127937854	127935097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
WTC11_00088636	chr9	-	1178	3	FSM	ENSG00000136908.18	ENST00000470181.1	928	3	-8	-242	0	0	multi-exon	FALSE	canonical	3	1272	junction_2	91	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931480	True	NA	-6	True	AATAAA	-16	NA	127937826	127935098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127935781_127936552_127936656_127937433
WTC11_00088638	chr9	-	4617	11	FSM	ENSG00000167106.12	ENST00000373095.6	4617	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	9.33220231242337	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTTTTGTTTTTAC	-127978850	True	NA	-9	True	ATTAAA	-19	NA	127980989	127940581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422_127950540_127953574_127953605_127953804_127953926_127979991
WTC11_00088640	chr9	-	3352	8	FSM	ENSG00000167106.12	ENST00000373084.8	3352	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_7	8.2412600582034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGTTTTTTTTTTTTCC	NA	False	NA	-8	True	AATAAA	-14	NA	127950722	127940880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422
WTC11_00088643	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066887	True	NA	-2	True	ATTAAA	-24	NA	128067320	128061232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128063901_128066590
WTC11_00088644	chr9	-	2015	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	-417	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	451.684870481868	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128107	False	NA	-4	True	AATAAA	-42	NA	128128146	128120692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
WTC11_00088645	chr9	-	1345	8	FSM	ENSG00000148334.16	ENST00000617202.4	1344	8	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	583.471804750474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128149	False	NA	-4	True	AATAAA	-42	NA	128128188	128120692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123848_128124491_128124551_128125243_128125284_128125375_128125442_128128054
WTC11_00088646	chr9	-	1592	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	23	-1	23	0	multi-exon	FALSE	canonical	0	0	junction_2	578.149475764296	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128180	True	NA	-4	True	AATAAA	-42	NA	128128439	128120692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
WTC11_00088647	chr9	-	1924	7	FSM	ENSG00000148334.16	ENST00000677691.1	1901	7	0	-23	0	0	multi-exon	FALSE	canonical	0	0	junction_2	556.697529084591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128126807	False	NA	-4	True	AATAAA	-42	NA	128126846	128120692	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128126229
WTC11_00088648	chr9	-	3473	5	FSM	ENSG00000148334.16	ENST00000493205.6	3473	5	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_4	70.89913610193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128127137	False	NA	-27	True	AATAAA	-19	NA	128127176	128120715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128125243
WTC11_00088649	chr9	-	2110	7	FSM	ENSG00000148334.16	ENST00000496594.5	2103	7	0	-7	0	0	multi-exon	FALSE	canonical	3	89	junction_4	531.283796310618	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117629	True	NA	-27	True	AATAAA	-19	NA	128127717	128120715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
WTC11_00088651	chr9	-	1664	8	FSM	ENSG00000148334.16	ENST00000677651.1	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	574.239230528141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117637	True	NA	-27	True	AATAAA	-19	NA	128127725	128120715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
WTC11_00088652	chr9	-	1937	8	FSM	ENSG00000148334.16	ENST00000677980.1	1937	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	586.659759544992	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117638	True	NA	-27	True	AATAAA	-19	NA	128127726	128120715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128125895_128126261_128127438
WTC11_00088655	chr9	-	3116	5	FSM	ENSG00000148334.16	ENST00000497109.6	3115	5	0	-1	0	0	multi-exon	FALSE	canonical	3	49	junction_2	486.8179202741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117644	True	NA	-27	True	AATAAA	-19	NA	128127732	128120715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128123135_128123701_128123848_128124491_128124551_128125243_128125442_128127438
WTC11_00088657	chr9	-	3080	5	FSM	ENSG00000148334.16	ENST00000483625.6	3080	5	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	37.676252467569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGGGACATGTTTGCA	-128117647	True	NA	-70	True	NA	NA	NA	128127735	128120758	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
WTC11_00088662	chr9	-	1062	3	FSM	ENSG00000148337.22	ENST00000485862.5	843	3	-210	-9	0	8	multi-exon	FALSE	canonical	3	473	junction_1	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTCTGTCTGGGTGGA	-128167666	False	NA	-3	True	AATAAA	-31	NA	128167683	128166055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094
WTC11_00088664	chr9	-	725	5	FSM	ENSG00000148337.22	ENST00000471773.5	717	5	0	-8	0	8	multi-exon	FALSE	canonical	3	34	junction_3	190.079588593831	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTCTGTCTGGGTGGA	-128169450	False	NA	-3	True	AATAAA	-31	NA	128169461	128166055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169075_128169202_128169405
WTC11_00088665	chr9	-	2975	17	FSM	ENSG00000148337.22	ENST00000372938.10	2975	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_13	71.9364954317348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-128188726	True	NA	-12	True	AATAAA	-22	NA	128191572	128166064	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
WTC11_00088666	chr9	-	2740	17	FSM	ENSG00000148337.22	ENST00000372954.5	2731	17	0	-9	0	8	multi-exon	TRUE	canonical	3	133	junction_14	95.6386223957142	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTCTGTCTGGGTGGA	-128188722	True	NA	-3	True	AATAAA	-31	NA	128191568	128166055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
WTC11_00088668	chr9	-	2508	15	FSM	ENSG00000148337.22	ENST00000415526.5	2508	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	118.59887806194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTTTTAGGAGTCTGC	-128190696	False	2846	-99	True	NA	NA	NA	128190710	128166151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180800_128185546_128185777_128190328_128190445_128190687
WTC11_00088678	chr9	-	4263	26	FSM	ENSG00000167110.19	ENST00000421699.8	4297	26	37	-3	6	3	multi-exon	FALSE	canonical	3	46	junction_20	21.9652816963498	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTGATGTGTTCCTG	-128272319	True	NA	-7	True	AATAAA	-18	NA	128275989	128255825	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128257282_128257368_128257526_128257600_128257708_128257789_128257893_128257979_128258199_128258454_128258571_128259006_128259083_128259166_128259392_128260075_128260190_128260464_128260803_128261171_128261260_128261453_128261562_128261667_128261758_128262562_128262705_128263033_128263093_128265584_128265692_128265787_128265882_128265969_128266021_128266286_128266326_128267193_128267275_128267457_128267518_128267933_128267998_128268116_128268161_128268419_128268525_128273849_128273973_128275892
WTC11_00088679	chr9	-	4274	25	FSM	ENSG00000167110.19	ENST00000693185.1	4197	25	-75	-2	-56	2	multi-exon	FALSE	canonical	3	30	junction_19	22.5467107726752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGATGTGTTCCT	-128276028	False	NA	-8	True	AATAAA	-17	NA	128276082	128255826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128257282_128257368_128257526_128257600_128257708_128257789_128257893_128257979_128258199_128258454_128258571_128259006_128259083_128259166_128259392_128260075_128260190_128260464_128260803_128261171_128261260_128261453_128261562_128261667_128261758_128262562_128262705_128263033_128263093_128265584_128265692_128265787_128265882_128265969_128266021_128266286_128266326_128267457_128267518_128267933_128267998_128268116_128268161_128268419_128268525_128273849_128273973_128275892
WTC11_00088683	chr9	-	704	10	ISM	ENSG00000167110.19	ENST00000687179.1	4259	26	3130	7198	3130	-471	internal_fragment	FALSE	canonical	2	2	junction_9	37.4930446224594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGGGGGATGGTGGG	-128272811	False	NA	NA	False	NA	NA	NA	128272865	128263033	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_128263093_128265584_128265692_128265787_128265882_128265969_128266021_128266286_128266326_128267457_128267518_128267933_128267998_128268116_128268161_128268419_128268525_128272784
WTC11_00088684	chr9	-	428	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	0	8	0	multi-exon	FALSE	canonical	3	115	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAGTTTAAATGAGA	-128272317	True	NA	-12	True	TATAAA	-18	NA	128275987	128273639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128273973_128275892
WTC11_00088685	chr9	-	5440	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	-14	0	14	multi-exon	FALSE	canonical	3	454	junction_1	38.9389894316633	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCATCCCACCCACGT	-128318798	True	NA	-12	True	ATTAAA	-21	NA	128322447	128305144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
WTC11_00088686	chr9	-	602	1	FSM	ENSG00000207955.5	ENST00000608502.2	1504	1	900	2	900	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGGGGTTTTATTTGTTT	-128392575	False	NA	NA	False	ATTAAA	-17	NA	128392610	128392008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128392000_128392600
WTC11_00088687	chr9	-	1774	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	49	0	49	0	multi-exon	FALSE	canonical	3	479	junction_5	43.8463225367875	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656798	128633652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
WTC11_00088690	chr9	-	739	5	FSM	ENSG00000119333.12	ENST00000419989.2	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	236.698119975635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCATCGGGGTAGGCCA	-128650622	True	NA	NA	False	NA	NA	NA	128656681	128635178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128635260_128635657_128635768_128636280_128636439_128640690_128640940_128656540
WTC11_00088691	chr9	-	796	3	FSM	ENSG00000119333.12	ENST00000473486.1	714	3	-82	0	-82	0	multi-exon	FALSE	canonical	3	479	junction_1	26.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCGTGACACCTGGGCAG	-128637076	False	NA	NA	False	NA	NA	NA	128637110	128635322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128635768_128636280_128636439_128636917
WTC11_00088692	chr9	-	1811	4	FSM	ENSG00000119333.12	ENST00000451652.5	1039	4	-33	-739	-33	0	multi-exon	FALSE	canonical	3	532	junction_1	44.9221548904324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCATCGGGGTAGGCCA	-128650673	True	NA	NA	False	NA	NA	NA	128656732	128635178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128636439_128636917_128637028_128640690_128640940_128656540
WTC11_00088693	chr9	-	745	3	FSM	ENSG00000119333.12	ENST00000480613.6	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGTCGGGGCCAGGACA	-128650622	True	NA	NA	False	NA	NA	NA	128656681	128636083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128636439_128640690_128640940_128656540
WTC11_00088694	chr9	-	1106	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	204.449718757449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-128717781	True	NA	-15	True	TATAAA	-22	NA	128724109	128720872	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
WTC11_00088695	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	55.8949908310217	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-128717799	True	NA	-15	True	TATAAA	-22	NA	128724127	128720872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
WTC11_00088696	chr9	-	2541	4	FSM	ENSG00000160446.19	ENST00000467312.1	2536	4	0	-5	0	-2	multi-exon	FALSE	canonical	3	26	junction_1	204.568380308938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACCATATCACTCCTT	-128717799	True	NA	-17	True	TATAAA	-20	NA	128724127	128720874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437
WTC11_00088700	chr9	-	4059	16	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	30.5160067287099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	-128770674	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771814
WTC11_00088701	chr9	-	4296	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	-3	0	3	multi-exon	FALSE	canonical	3	120	junction_15	18.7434136580175	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCTTTTTTTGTGGAGG	-128770674	True	NA	2	True	AATACA	-24	NA	128771927	128729782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
WTC11_00088705	chr9	-	4263	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	-4	0	4	multi-exon	FALSE	canonical	3	350	junction_2	66.4205235632272	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAATTATCCTGAAACCC	-128822289	True	NA	-10	True	AATAAA	-21	NA	128829794	128819646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
WTC11_00088708	chr9	-	690	4	FSM	ENSG00000198917.13	ENST00000467396.1	451	4	0	-239	0	200	multi-exon	FALSE	canonical	3	508	junction_1	21.5148527508066	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAAGTCACTCTGGA	-128819705	False	NA	NA	False	NA	NA	NA	128827210	128825781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128826153_128826383_128826434_128826539_128826630_128827031
WTC11_00088710	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_12	17.5760253375633	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879669	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
WTC11_00088711	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	50.7074260395413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879755	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
WTC11_00088712	chr9	-	1623	12	FSM	ENSG00000171097.14	ENST00000320665.10	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	54.3704769183661	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGACGGCTTCTCT	-128879648	True	NA	-6	True	AATAAA	-19	NA	128881929	128833118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128842653_128842802_128845352_128845412_128881896
WTC11_00088714	chr9	-	847	8	FSM	ENSG00000171097.14	ENST00000451800.5	847	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	64.2221908371115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTGGAAGGTGAGTTG	-128882420	True	NA	NA	False	NA	NA	NA	128882494	128836008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128882406
WTC11_00088715	chr9	-	842	6	FSM	ENSG00000171097.14	ENST00000416084.5	736	6	-106	0	-106	0	multi-exon	FALSE	canonical	3	9	junction_5	73.3304847931609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCCTGGGCAAGGTACT	NA	False	NA	NA	False	NA	NA	NA	128846963	128837699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128846679
WTC11_00088716	chr9	-	2089	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	-16	1	-16	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTTTTGCTGATAT	-128945855	True	NA	-6	True	AATAAA	-16	NA	128947619	128945530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128945500_128947600
WTC11_00088717	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_5	66.1589752036713	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-129025390	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
WTC11_00088718	chr9	-	2794	6	FSM	ENSG00000148341.18	ENST00000479237.5	2794	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	267.022845464578	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTGGAGCGGACT	-129012005	False	NA	-5	True	AAAAAG	-10	NA	129012016	129007791	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669
WTC11_00088719	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	163.764495289288	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-129025273	True	NA	-6	True	AATAAA	-21	NA	129028214	129008033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
WTC11_00088720	chr9	-	1985	13	FSM	ENSG00000148341.18	ENST00000372554.8	1985	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	263.36645361338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	-129025338	True	NA	-11	True	AATAAA	-16	NA	129028279	129008038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129013007_129013020_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
WTC11_00088721	chr9	-	4828	4	FSM	ENSG00000148341.18	ENST00000461811.5	4828	4	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_2	38.0525951808809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGCCGCAGTCTTCACCT	-129013935	False	NA	-109	True	NA	NA	NA	129013950	129008136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119
WTC11_00088725	chr9	-	1015	9	FSM	ENSG00000148341.18	ENST00000483980.5	1015	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_3	73.5984672055064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCCCATACCCTGTC	-129025354	True	NA	NA	False	NA	NA	NA	129028295	129009735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
WTC11_00088728	chr9	-	429	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	76	-94	76	94	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAACAGCCACACCTTCC	-129080538	True	NA	91	True	NA	NA	NA	129080689	129080260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129080300_129080700
WTC11_00088729	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	5.82384407099929	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-129110116	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
WTC11_00088731	chr9	-	973	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGATGCAGTGACTC	-129110034	True	NA	-2	True	AATACA	-16	NA	129110711	129107333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129108078_129110482
WTC11_00088732	chr9	-	4607	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	-4	0	3	multi-exon	FALSE	canonical	3	157	junction_2	15.5357651887508	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCAGTAAGTTAT	-129639506	True	NA	NA	False	AATAAA	-20	NA	129642151	129634600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
WTC11_00088733	chr9	-	1781	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	-31	1	-31	-1	multi-exon	FALSE	canonical	3	13	junction_2	3.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCCCAGCACCTCGT	-129752812	True	NA	-21	True	ATTAAA	-15	NA	129753073	129738349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129739861_129748654_129748738_129752886
WTC11_00088734	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	1	175	junction_3	83.6551701928817	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-129820516	True	NA	0	True	AATAAA	-16	NA	129824136	129812941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
WTC11_00088735	chr9	-	2227	6	FSM	ENSG00000136827.12	ENST00000651202.1	2285	6	58	0	-50	0	multi-exon	FALSE	canonical	1	2	junction_1	164.211327258506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAATTTTGCATGTG	-129820566	True	NA	-23	True	TATAAA	-20	NA	129824186	129812964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129814223_129818177_129818298_129818519_129818648_129818744_129818921_129822580_129822847_129823907
WTC11_00088736	chr9	-	1665	2	FSM	ENSG00000136827.12	ENST00000473084.1	1668	2	0	3	0	-3	multi-exon	FALSE	canonical	3	354	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATCCTTGTAGCAGACC	-129820484	True	NA	NA	False	AATAAA	-17	NA	129824104	129821378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129822847_129823907
WTC11_00088737	chr9	-	1796	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	-1	0	1	multi-exon	FALSE	canonical	3	483	junction_1	77.3384404743204	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTTTGTATTATGTT	-129825601	True	NA	82	True	ATTAAA	-19	NA	129835275	129827288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
WTC11_00088741	chr9	-	5420	17	FSM	ENSG00000187239.17	ENST00000446176.7	5420	17	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	23.9092522624611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038918	True	NA	-15	True	AATAAA	-13	NA	130043189	129887186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00088742	chr9	-	5410	16	FSM	ENSG00000187239.17	ENST00000420781.5	5410	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	17.3276913894751	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038923	True	NA	-15	True	AATAAA	-13	NA	130043194	129887186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00088746	chr9	-	1232	1	FSM	ENSG00000188710.3	ENST00000343079.1	411	1	6	-827	6	106	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCGGCAGTCGGTCAA	NA	False	NA	NA	False	NA	NA	NA	130893832	130892600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130892600_130893800
WTC11_00088747	chr9	-	3642	7	FSM	ENSG00000130720.13	ENST00000372338.9	3650	7	0	8	0	-8	multi-exon	FALSE	canonical	3	16	junction_3	2.85287379477061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGCAGATGTCTGCAGC	-130938674	True	NA	-8	True	NA	NA	NA	130939247	130902447	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535
WTC11_00088748	chr9	-	3242	8	FSM	ENSG00000130720.13	ENST00000448616.5	3119	8	-72	-51	0	51	multi-exon	FALSE	canonical	3	16	junction_3	5.20988072251728	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCTCTCGGTCCTCAG	-130939125	False	NA	53	True	NA	NA	NA	130939140	130902386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535_130938649_130939002
WTC11_00088750	chr9	-	453	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	-4	0	4	multi-exon	FALSE	canonical	3	32	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGTATTGTGATTTTC	-130939124	False	NA	0	True	AATAAA	-20	NA	130939139	130938012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130938216_130938535_130938649_130939002
WTC11_00088751	chr9	-	389	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	-4	0	4	multi-exon	FALSE	canonical	3	16	junction_2	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGTATTGTGATTTTC	-130938713	True	NA	0	True	AATAAA	-20	NA	130939286	130938012	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130938216_130938535_130938649_130939213
WTC11_00088752	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	137.064968374693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527012	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
WTC11_00088754	chr9	-	2157	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	5	0	1	0	multi-exon	FALSE	canonical	3	312	junction_3	43.3503171845374	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527091	True	NA	-4	True	AATAAA	-21	NA	131531258	131523800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
WTC11_00088757	chr9	-	783	7	FSM	ENSG00000130717.13	ENST00000494584.5	788	7	5	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	130.172214990587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGGGCGGAGCTACAA	-131527092	True	NA	NA	False	NA	NA	NA	131531259	131525147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529557_131530485_131530646_131531066
WTC11_00088759	chr9	-	286	2	FSM	ENSG00000130717.13	ENST00000482398.1	274	2	0	-12	0	12	multi-exon	FALSE	canonical	3	312	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAACATTCTCTGTGC	-131524990	False	NA	NA	False	NA	NA	NA	131529157	131528782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131529039_131529127
WTC11_00088760	chr9	-	6126	24	NNC	ENSG00000107263.19	novel	6256	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.5874813485033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCGCCCAGCTGCATG	-131736539	False	NA	-2	True	AATAAA	-26	NA	131739944	131576769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589975_131592094_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650128_131650243_131650809_131650950_131739769
WTC11_00088761	chr9	-	6139	23	NNC	ENSG00000107263.19	novel	6256	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	70.9882570896631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCGCCCAGCTGCATG	-131736666	True	NA	-2	True	AATAAA	-26	NA	131740071	131576769	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589975_131592094_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650809_131650950_131739769
WTC11_00088762	chr9	-	588	4	FSM	ENSG00000107263.19	ENST00000438647.3	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	74.1484996476665	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGAGATGGTGAC	-131736539	False	NA	NA	False	NA	NA	NA	131739944	131638697	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131638792_131643238_131643418_131650809_131650950_131739769
WTC11_00088763	chr9	-	1278	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	3	0	2	multi-exon	FALSE	canonical	1	10	junction_3	140.488137102983	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTTTGTCTCCTGTTT	-132079304	True	NA	-5	True	AATAAA	-17	NA	132079866	131860109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
WTC11_00088764	chr9	-	1387	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	-2	0	2	multi-exon	FALSE	canonical	3	344	junction_2	23.460779255287	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTTTGTCTCCTGTTT	-132079305	True	NA	-5	True	AATAAA	-17	NA	132079867	131860109	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
WTC11_00088766	chr9	-	761	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	1	0	-1	multi-exon	FALSE	canonical	1	5	junction_1	182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTGAATTTTTAATT	-132079304	True	NA	NA	False	AATAAA	-14	NA	132079866	132073351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132073743_132077441_132077587_132079641
WTC11_00088768	chr9	-	11105	26	FSM	ENSG00000107290.14	ENST00000224140.6	11101	26	0	-4	0	4	multi-exon	FALSE	canonical	3	43	junction_17	23.7157837736812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTCCTTCCTAGCTCCT	-132350390	True	NA	88	True	TATAAA	-20	NA	132354986	132261351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
WTC11_00088769	chr9	-	11104	27	NIC	ENSG00000107290.14	novel	11101	26	NA	NA	0	-84	combination_of_known_junctions	TRUE	canonical	3	37	junction_1	25.51159963578	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCTGCCATTTGGTTT	-132350390	True	NA	0	True	AGTAAA	-20	NA	132354986	132261439	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132264986_132269402_132269490_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
WTC11_00088773	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	20.9047841414352	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403715	True	NA	4	True	ATTAAA	-42	NA	132406840	132375547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
WTC11_00088774	chr9	-	1769	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	11	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	40.7370368686716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403715	True	NA	4	True	ATTAAA	-42	NA	132406840	132375547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
WTC11_00088776	chr9	-	4577	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-418	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	16.9948664238511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTCTTGACAGATTA	-132670122	True	NA	-2	True	AATAAA	-16	NA	132670401	132592996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
WTC11_00088777	chr9	-	6243	3	ISM	ENSG00000125485.18	ENST00000372159.8	4159	20	46404	1292	-11266	-1292	3prime_fragment	FALSE	canonical	3	73	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	NA	False	NA	-4	True	NA	NA	NA	132623579	132594288	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_132595113_132612086_132612256_132618329
WTC11_00088778	chr9	-	1335	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_1	32.9616780856531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTTGAGTCTGTGTT	-132670122	True	NA	-3	True	AATAAA	-26	NA	132670401	132658078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
WTC11_00088779	chr9	-	8599	23	FSM	ENSG00000165699.15	ENST00000298552.9	8598	23	0	-1	0	0	multi-exon	FALSE	canonical	3	38	junction_22	26.9531273580667	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGTGGACATGGAG	-132941028	True	NA	-1	True	AATAAA	-21	NA	132944616	132891347	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
WTC11_00088783	chr9	-	5729	21	FSM	ENSG00000165699.15	ENST00000645901.1	5732	21	3	0	-1	0	multi-exon	FALSE	canonical	3	37	junction_20	27.6249886877805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAACTTGGCTTTCCT	-132941040	True	NA	NA	False	NA	NA	NA	132944628	132894848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
WTC11_00088785	chr9	-	4039	23	FSM	ENSG00000165699.15	ENST00000642617.1	4039	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	28.0381970866133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGAGGCCAAATTTAAT	-132941035	True	NA	-54	True	NA	NA	NA	132944623	132895911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
WTC11_00088790	chr9	-	2299	12	FSM	ENSG00000165699.15	ENST00000642745.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	24.5558900375692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAACATGTATGTGTAA	-132941028	True	NA	49	True	ATTAAA	-10	NA	132944616	132909751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
WTC11_00088795	chr9	-	1712	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	5	0	-1	0	multi-exon	FALSE	canonical	3	38	junction_9	22.4422441165685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	-132941040	True	NA	NA	False	AGTAAA	-20	NA	132944628	132910998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
WTC11_00088798	chr9	-	4602	18	FSM	ENSG00000160271.16	ENST00000493438.5	4602	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	41.611733107141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-133120991	False	NA	NA	False	ATTAAA	-18	NA	133121156	133097719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133100495_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133120971
WTC11_00088800	chr9	-	3696	18	FSM	ENSG00000160271.16	ENST00000372050.8	3696	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	35.0184331094275	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-133121075	True	NA	NA	False	ATTAAA	-16	NA	133121240	133097721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133120971
WTC11_00088801	chr9	-	3844	18	FSM	ENSG00000160271.16	ENST00000393160.7	3801	18	-43	0	-43	0	multi-exon	FALSE	canonical	3	62	junction_15	21.5604084161842	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-133149324	False	NA	NA	False	ATTAAA	-18	NA	133149377	133097719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133148962
WTC11_00088802	chr9	-	3860	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_15	17.267887270765	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-133149378	True	NA	NA	False	ATTAAA	-16	NA	133149431	133097721	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
WTC11_00088804	chr9	-	1954	7	FSM	ENSG00000148288.13	ENST00000372040.9	1954	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.23606797749979	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGGTGATTTTTTTTGT	-133162761	True	NA	-16	True	AATAAA	-22	NA	133163914	133152947	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
WTC11_00088805	chr9	-	4233	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	2	0	-2	multi-exon	TRUE	canonical	3	557	junction_3	51.8700298823897	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACACTGGATTTAATTC	-133316829	True	NA	NA	False	AATAAA	-16	NA	133336188	133328777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
WTC11_00088806	chr9	-	3946	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	98	0	-87	multi-exon	FALSE	canonical	3	191	junction_1	85.0951673128386	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGAACCCGGGAGGCGG	-133338507	True	NA	NA	False	NA	NA	NA	133348131	133338409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
WTC11_00088807	chr9	-	5276	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	-1409	0	-1173	multi-exon	FALSE	canonical	3	375	junction_2	12.1928941054479	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGGTCTTTTATTTTT	-133338493	True	NA	NA	False	NA	NA	NA	133348117	133339495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
WTC11_00088811	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	137.467621419647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356451	False	NA	-2	True	TATAAA	-25	NA	133356485	133351804	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
WTC11_00088812	chr9	-	1092	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	50.4002728167219	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCCCAAAACTTGAT	-133356453	False	NA	45	True	CATAAA	-25	NA	133356487	133351757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
WTC11_00088814	chr9	-	3148	6	FSM	ENSG00000148248.14	ENST00000613129.4	3148	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	591.145531996986	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367544_133375921
WTC11_00088815	chr9	-	2863	5	FSM	ENSG00000148248.14	ENST00000545297.5	2863	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	642.721946101111	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133365984_133366029_133366598_133366676_133367258_133367446_133375921
WTC11_00088816	chr9	-	2944	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	-14	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	41.6797312851223	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133359154	True	NA	-1	True	AATAAA	-32	NA	133376060	133361449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
WTC11_00088817	chr9	-	2329	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	-3	0	0	multi-exon	TRUE	canonical	3	239	junction_6	19.2491717288017	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGAGGCTCAGTGT	-133410878	True	NA	-34	True	AATAAA	-23	NA	133418010	133406058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
WTC11_00088818	chr9	-	1909	6	FSM	ENSG00000148300.12	ENST00000371935.6	1899	6	0	-10	0	10	multi-exon	FALSE	canonical	3	8	junction_5	137.842518839435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGTGTTGACTCTCAT	NA	False	NA	-24	True	AATAAA	-33	NA	133418096	133406048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133414664_133414834_133417619
WTC11_00088820	chr9	-	2503	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	3	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_6	41.5365375376581	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGTCTACTCCAGGA	-133477244	True	NA	0	True	AATAAA	-31	NA	133479096	133471078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
WTC11_00088821	chr9	-	2317	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	-16	0	15	multi-exon	FALSE	canonical	0	0	junction_5	50.3878705642539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGTCTACTCCAGGA	-133477244	True	NA	0	True	AATAAA	-31	NA	133479096	133471078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
WTC11_00088822	chr9	-	3433	8	FSM	ENSG00000160326.14	ENST00000485978.1	3417	8	0	-16	0	15	multi-exon	FALSE	canonical	0	0	junction_5	46.0292719641645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGTCTACTCCAGGA	-133477244	True	NA	0	True	AATAAA	-31	NA	133479096	133471078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473414_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253
WTC11_00088825	chr9	-	3222	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	-7	0	7	multi-exon	TRUE	canonical	3	36	junction_20	11.2795168336237	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATAGGCTTCATCTTTT	-133737627	True	NA	-6	True	AGTAAA	-32	NA	133738352	133663552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
WTC11_00088826	chr9	-	5328	28	FSM	ENSG00000160293.17	ENST00000371851.1	5101	28	-226	-1	-226	1	multi-exon	FALSE	canonical	3	32	junction_3	43.3765533120035	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCAGCCTTTCGTAC	-133991363	True	NA	-1	True	AATAAA	-20	NA	133992830	133761892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133764110_133768441_133768597_133769416_133769504_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
WTC11_00088827	chr9	-	5235	27	FSM	ENSG00000160293.17	ENST00000406606.7	4691	27	-540	-4	-217	4	multi-exon	FALSE	canonical	3	139	junction_24	22.819201921438	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCAGCCTTTCGTACCAG	-133991354	True	NA	2	True	AATAAA	-23	NA	133992821	133761889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
WTC11_00088828	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	28.745966299855	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-134060606	True	NA	1	True	AATAAA	-26	NA	134068026	134030304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
WTC11_00088829	chr9	-	5658	12	NNC	ENSG00000169925.17	novel	5661	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_2	55.8736768845137	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-134060606	True	NA	1	True	AATAAA	-26	NA	134068026	134030304	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_134033706_134034700_134034827_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
WTC11_00088830	chr9	-	507	2	FSM	ENSG00000169925.17	ENST00000494743.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGTCGGGGAGCAGG	-134050360	False	67	NA	False	NA	NA	NA	134050427	134048001	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_134048455_134050373
WTC11_00088831	chr9	-	705	1	FSM	ENSG00000225361.4	ENST00000603893.1	424	1	3	-284	-1	284	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTCACCTCCGCCCGTCC	-135480627	True	NA	NA	False	NA	NA	NA	135480735	135480030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135480000_135480700
WTC11_00088832	chr9	-	677	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	-2	0	2	multi-exon	FALSE	canonical	3	122	junction_1	8	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTCGTCTGACGTTT	-135498319	True	NA	1	True	ATTAAA	-21	NA	135499869	135495178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135495616_135498584_135498664_135499708
WTC11_00088833	chr9	-	1280	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	-2	0	2	multi-exon	FALSE	canonical	3	11	junction_1	63.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTCGTCTGACGTTT	-135500421	True	NA	1	True	ATTAAA	-21	NA	135500518	135495178	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135495570_135498584_135498664_135499708
WTC11_00088834	chr9	-	4344	6	ISM	ENSG00000130559.19	ENST00000312405.10	6054	15	63231	-1109	-600	15	3prime_fragment	FALSE	canonical	2	65	junction_1	24.644674881199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAATTGATTGTGATTT	-135819648	False	NA	5	True	AATAAA	-35	NA	135819666	135808471	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009
WTC11_00088835	chr9	-	7414	15	NIC	ENSG00000130559.19	novel	8018	17	NA	NA	-139	0	intron_retention	FALSE	canonical	2	10	junction_14	32.0878895077446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGGAGAATGTTTTAC	-135905789	True	NA	-10	True	AATAAA	-20	NA	135907367	135808486	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135862466_135862609_135866455_135866537_135906999
WTC11_00088836	chr9	-	8018	17	FSM	ENSG00000130559.19	ENST00000389532.9	8018	17	9	-9	9	9	multi-exon	FALSE	canonical	2	50	junction_13	26.4308502275277	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTACAATTGATTG	-135907359	True	NA	-1	True	AATAAA	-29	NA	135907537	135808477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135862466_135862609_135866455_135866537_135881632_135881795_135882815_135883079_135906999
WTC11_00088839	chr9	-	1723	11	NNC	ENSG00000130560.9	novel	1860	10	NA	NA	0	64359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.67017194791	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCAATCTCATCAGAAAA	-135957774	False	3438	NA	False	NA	NA	NA	135961212	135868609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135868636_135932970_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
WTC11_00088840	chr9	-	1877	11	NNC	ENSG00000130560.9	novel	1860	10	NA	NA	0	9888	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.67017194791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGATTGGTGGCTTAC	-135957935	True	NA	NA	False	NA	NA	NA	135961373	135923080	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135923099_135932969_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
WTC11_00088841	chr9	-	2434	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	-574	0	574	multi-exon	FALSE	canonical	3	532	junction_2	35.9468056926644	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTCGGCCGGGCGCGG	-135957935	True	NA	NA	False	ATTAAA	-19	NA	135961373	135932394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
WTC11_00088843	chr9	-	6904	6	FSM	ENSG00000148411.8	ENST00000277554.4	6903	6	0	-1	0	1	multi-exon	FALSE	canonical	3	25	junction_5	12.7843654515975	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGACTTGGCTTGGC	-136094428	True	NA	0	True	AATAAA	-18	NA	136095289	136006535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136095188
WTC11_00088845	chr9	-	2853	3	NNC	ENSG00000238227.8	novel	2827	2	NA	NA	0	29443	intron_retention	FALSE	non_canonical	0	0	junction_1	105	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGAAATGGAGTCTTCC	-136116068	True	NA	NA	False	NA	NA	NA	136118875	136085137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136085164_136114588_136117025_136118484
WTC11_00088846	chr9	-	1989	3	FSM	ENSG00000238227.8	ENST00000557985.2	1981	3	0	-8	0	0	multi-exon	FALSE	canonical	3	14	junction_1	98	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGCTTAAAGTTCAAT	-136118494	False	NA	-10	True	ATTAAA	-26	NA	136118534	136114580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136114951_136115455_136117025_136118484
WTC11_00088848	chr9	-	4502	12	FSM	ENSG00000165661.17	ENST00000358701.10	4501	12	0	-1	0	1	multi-exon	FALSE	canonical	2	6	junction_5	9.23700785154948	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATTCTTTTGAAATGTG	-136241173	True	NA	NA	False	AATAAA	-23	NA	136245812	136206331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136209276_136211263_136211453_136215153_136215305_136216599_136216723_136218678_136218809_136219029_136219165_136221795_136221942_136223762_136223854_136224006_136224113_136224860_136224910_136226773_136226875_136245475
WTC11_00088849	chr9	-	3099	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	-3	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.5	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGGGGGCGCTACGTCC	-136362073	True	NA	NA	False	AATAAA	-21	NA	136363744	136359479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136362181_136362988_136363129_136363486
WTC11_00088850	chr9	-	5018	23	FSM	ENSG00000165684.6	ENST00000298532.2	5010	23	0	-8	0	-2	multi-exon	TRUE	canonical	3	52	junction_11	21.4948100597361	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGTTGTGGTTTTGTT	-136398785	False	NA	-1	True	AATAAA	-29	NA	136398797	136375568	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298
WTC11_00088856	chr9	-	2400	10	FSM	ENSG00000165689.17	ENST00000357365.8	2391	10	0	-9	0	9	multi-exon	FALSE	canonical	3	92	junction_8	169.428742441866	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	-136403970	True	NA	4	True	AATAAA	-27	NA	136410614	136401912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410089_136410240_136410327
WTC11_00088857	chr9	-	2326	9	FSM	ENSG00000165689.17	ENST00000298537.11	2314	9	0	-12	0	9	multi-exon	FALSE	canonical	3	136	junction_8	142.100976421698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	-136403965	True	NA	4	True	AATAAA	-27	NA	136410609	136401912	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089_136410240_136410327
WTC11_00088858	chr9	-	2396	8	ISM	ENSG00000165689.17	ENST00000298537.11	2314	9	18	-12	2	9	intron_retention	FALSE	canonical	3	174	junction_7	110.593021147497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	-136403947	True	NA	4	True	AATAAA	-27	NA	136410591	136401912	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089
WTC11_00088859	chr9	-	2129	8	FSM	ENSG00000165689.17	ENST00000371725.7	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_7	121.251804110289	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAATAAATTCTGTAG	-136403956	True	NA	-34	True	TTTAAA	-36	NA	136410600	136401950	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327
WTC11_00088860	chr9	-	1498	9	NIC	ENSG00000165689.17	novel	2391	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_8	170.277530813669	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCTTGGCCACCACA	-136403949	True	NA	15	True	AGTAAA	-35	NA	136410593	136402643	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410327
WTC11_00088865	chr9	-	3417	10	FSM	ENSG00000148384.14	ENST00000371712.4	3417	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	18.0684569292031	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136438269	True	NA	-4	True	AATAAA	-22	NA	136439845	136428618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
WTC11_00088867	chr9	-	1671	3	FSM	ENSG00000148384.14	ENST00000674513.1	532	3	-1177	38	-22	-38	multi-exon	FALSE	canonical	3	104	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGTCTCTGAAGCTGCT	-136438291	True	NA	NA	False	NA	NA	NA	136439867	136433847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136434135_136434739_136434864_136438607
WTC11_00088868	chr9	-	4839	26	FSM	ENSG00000148396.19	ENST00000453963.5	4834	26	0	-5	0	0	multi-exon	TRUE	canonical	3	127	junction_2	36.4739029992678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136467037	False	NA	0	True	AATAAA	-29	NA	136467051	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956
WTC11_00088869	chr9	-	8098	28	FSM	ENSG00000148396.19	ENST00000371706.8	8093	28	0	-5	0	0	multi-exon	FALSE	canonical	3	45	junction_2	44.8052025197912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136477103	False	NA	0	True	AATAAA	-29	NA	136477115	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048
WTC11_00088870	chr9	-	8802	30	FSM	ENSG00000148396.19	ENST00000313050.11	8806	30	5	-1	5	0	multi-exon	FALSE	canonical	3	68	junction_3	44.5474803145826	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136477672	False	NA	0	True	AATAAA	-29	NA	136477684	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048
WTC11_00088871	chr9	-	8983	29	FSM	ENSG00000148396.19	ENST00000290037.10	8982	29	0	-1	0	0	multi-exon	FALSE	canonical	2	8	junction_28	63.4459435669613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136483205	True	NA	0	True	AATAAA	-29	NA	136483759	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136446854_136447016_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136483509
WTC11_00088875	chr9	-	9568	34	FSM	ENSG00000148400.13	ENST00000651671.1	9568	34	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_31	31.9753118722814	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTCTGCTCTGGCCTT	-136541411	True	NA	-9	True	AATAAA	-29	NA	136546048	136494432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
WTC11_00088876	chr9	-	9448	34	FSM	ENSG00000148400.13	ENST00000680218.1	9448	34	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	34.5637378518056	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTCTGCTCTGGCCTT	-136541411	True	NA	-9	True	AATAAA	-29	NA	136546048	136494432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506835_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
WTC11_00088877	chr9	-	5420	6	FSM	ENSG00000148400.13	ENST00000680003.1	5627	6	207	0	207	0	multi-exon	FALSE	canonical	3	121	junction_4	6.41872261435249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTTCCACTCCCCTCT	-136502465	False	NA	-20	True	AATAAA	-18	NA	136502488	136494443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136497559_136498898_136498997_136499111_136500848_136501747_136501914_136502000_136502089_136502271
WTC11_00088880	chr9	-	1391	5	FSM	ENSG00000169692.13	ENST00000371694.7	1391	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	169.997610277321	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683122	True	NA	-5	True	TATAAA	-19	NA	136687398	136673142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136673928_136674734_136674808_136676960_136677137_136677422_136677557_136687175
WTC11_00088881	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_5	32.2738284063109	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683181	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
WTC11_00088883	chr9	-	720	2	FSM	ENSG00000169692.13	ENST00000470861.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCAGCGCTCTAGCACTGC	-136683089	False	NA	NA	False	NA	NA	NA	136687365	136677026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136677557_136687175
WTC11_00088884	chr9	-	1610	2	FSM	ENSG00000233016.8	ENST00000663097.1	1610	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACATCTCATGGCTG	-136719066	False	NA	-73	True	GGGGCT	-40	NA	136727216	136724406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136725111_136726310
WTC11_00088885	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	5.8878405775519	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	-136720028	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
WTC11_00088887	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	121.783362985262	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136720034	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
WTC11_00088889	chr9	-	1776	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	4	0	-1	multi-exon	FALSE	canonical	2	4	junction_2	2.82842712474619	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTGGAGCCCGGGCA	-136742779	True	NA	-3	True	AATAAA	-20	NA	136742940	136738170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
WTC11_00088890	chr9	-	675	7	NNC	ENSG00000107223.13	novel	662	5	NA	NA	0	93629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	984.69596266507	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAGAAA	-136847750	True	NA	NA	False	NA	NA	NA	136866266	136768489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136768520_136824326_136824351_136862117_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088891	chr9	-	674	7	NNC	ENSG00000107223.13	novel	662	5	NA	NA	0	93629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	984.69596266507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAGAAA	-136847750	True	NA	NA	False	NA	NA	NA	136866266	136768489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136768520_136824326_136824352_136862119_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088892	chr9	-	673	7	NNC	ENSG00000107223.13	novel	662	5	NA	NA	0	93629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	984.69596266507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAGAAA	-136847750	True	NA	NA	False	NA	NA	NA	136866266	136768489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136768520_136824326_136824351_136862119_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088893	chr9	-	906	7	NNC	ENSG00000107223.13	novel	790	5	NA	NA	-38	93629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1035.0984521076	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAGAAA	-136847830	True	NA	NA	False	NA	NA	NA	136866346	136768489	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136768520_136824326_136824351_136862117_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088894	chr9	-	791	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	-1	0	1	multi-exon	FALSE	canonical	3	287	junction_1	810.257790767852	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTCTGCTGGCTGTTTT	-136847769	True	NA	-14	True	NA	NA	NA	136866285	136862117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088895	chr9	-	663	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	-1	0	1	multi-exon	FALSE	canonical	3	1823	junction_1	149.47136013297	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTCTGCTGGCTGTTTT	-136847792	True	NA	-14	True	NA	NA	NA	136866308	136862117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088896	chr9	-	809	4	FSM	ENSG00000107223.13	ENST00000371648.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	2096	junction_3	45.4606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGAGTGCTCGTGTGC	-136847750	True	NA	NA	False	NA	NA	NA	136866266	136862489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136863000_136863287_136863449_136863819_136863872_136866180
WTC11_00088897	chr9	-	1932	5	FSM	ENSG00000159069.14	ENST00000487794.5	1932	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	275.0549945011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136942471	False	NA	-2	True	AATAAA	-16	NA	136942668	136940434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136941754_136942467_136942546
WTC11_00088898	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_8	51.3771289096617	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944541	False	197	-2	True	AATAAA	-16	NA	136944738	136940434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
WTC11_00088899	chr9	-	2392	8	FSM	ENSG00000159069.14	ENST00000483559.5	2392	8	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_7	54.9099448262	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136939789	True	NA	-2	True	AATAAA	-16	NA	136944688	136940434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
WTC11_00088900	chr9	-	2339	8	FSM	ENSG00000159069.14	ENST00000459905.5	2339	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	222.375119735889	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944499	False	NA	-2	True	AATAAA	-16	NA	136944696	136940434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942944_136943348_136943507_136943890_136944107_136944593
WTC11_00088905	chr9	-	756	4	FSM	ENSG00000107331.18	ENST00000464520.1	886	4	130	0	130	0	multi-exon	FALSE	canonical	3	35	junction_3	6.18241233033047	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCCCTGCCTGGCACTGC	NA	False	NA	NA	False	NA	NA	NA	137009053	137007656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137007965_137008415_137008623_137008730_137008869_137008950
WTC11_00088906	chr9	-	697	4	FSM	ENSG00000107331.18	ENST00000437791.2	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	4.78423336480244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGCCTGGGCAGCATC	NA	False	NA	NA	False	NA	NA	NA	137010384	137009406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137009463_137009540_137009645_137009768_137009904_137009982
WTC11_00088908	chr9	-	544	4	ISM	ENSG00000107331.18	ENST00000371605.7	8151	48	40	15468	-11	-921	5prime_fragment	FALSE	canonical	3	17	junction_2	2.16024689946929	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCCTGTGCAGGGAAG	-137027743	True	NA	NA	False	NA	NA	NA	137028248	137022701	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137022866_137022940_137023053_137024142_137024237_137028074
WTC11_00088909	chr9	-	1479	9	FSM	ENSG00000107281.10	ENST00000371601.5	1475	9	0	-4	0	4	multi-exon	FALSE	canonical	3	161	junction_8	35.6841614025046	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTTGCCAGCTTGG	-137042484	True	NA	-7	True	ATTAAA	-24	NA	137046177	137039458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926_137043074_137045877
WTC11_00088910	chr9	-	4285	8	FSM	ENSG00000107281.10	ENST00000371600.7	2187	8	-2087	-11	0	4	multi-exon	FALSE	canonical	3	238	junction_6	12.5860304808667	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTTGCCAGCTTGG	-137042486	True	NA	-7	True	ATTAAA	-24	NA	137046179	137039458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
WTC11_00088911	chr9	-	744	3	FSM	ENSG00000107281.10	ENST00000488145.1	701	3	0	-43	0	43	multi-exon	FALSE	canonical	3	161	junction_2	47.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCCGCCCTCACACGC	-137045685	False	3693	NA	False	NA	NA	NA	137046056	137040769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137041188_137042926_137043074_137045877
WTC11_00088913	chr9	-	3862	5	NIC	ENSG00000186193.9	novel	3814	6	NA	NA	27	0	intron_retention	FALSE	canonical	3	156	junction_4	25.377155080899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGTGGTATTTATAGT	-137066635	True	NA	NA	False	AATAAA	-22	NA	137070530	137062126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
WTC11_00088914	chr9	-	3820	6	FSM	ENSG00000186193.9	ENST00000409687.5	3814	6	0	-6	0	6	multi-exon	FALSE	canonical	3	156	junction_5	29.4726992316618	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATTTATAGTTCCTTA	-137066662	True	NA	NA	False	AATAAA	-28	NA	137070557	137062120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
WTC11_00088915	chr9	-	1941	1	FSM	ENSG00000268996.3	ENST00000596585.3	1872	1	-68	-1	-68	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGAGTTTCTCTTTAG	NA	False	NA	-1	True	ATTAAA	-16	NA	137086885	137084944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137084900_137086900
WTC11_00088917	chr9	-	1611	12	ISM	ENSG00000176978.14	ENST00000371579.7	1601	13	61	-1	19	1	intron_retention	FALSE	canonical	3	111	junction_5	28.4491717260947	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTCCCGTCCTTCCT	-137113672	True	NA	-5	True	AATAAA	-18	NA	137114672	137110544	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462
WTC11_00088918	chr9	-	1570	13	NNC	ENSG00000176978.14	novel	1601	13	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	53.351754631148	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTCCCGTCCTTCCT	-137113716	True	NA	-5	True	AATAAA	-18	NA	137114716	137110544	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114014_137114242_137114383_137114462_137114577_137114646
WTC11_00088919	chr9	-	1618	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	-17	0	17	multi-exon	FALSE	canonical	3	111	junction_5	29.1836855109152	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGTGGGGCCCACA	-137113733	True	NA	11	True	AATAAA	-34	NA	137114733	137110528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
WTC11_00088920	chr9	-	958	5	FSM	ENSG00000176978.14	ENST00000483783.1	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	22.3941956765587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGCTTCACTCAAGCA	-137112570	False	NA	-72	True	NA	NA	NA	137112604	137110611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111
WTC11_00088926	chr9	-	1209	2	FSM	ENSG00000184709.7	ENST00000371542.3	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGACATTCCTTTAGG	NA	False	NA	0	True	NA	NA	NA	137170051	137168757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137169186_137169270
WTC11_00088927	chr9	-	1973	3	FSM	ENSG00000176248.9	ENST00000487917.1	1972	3	0	-1	0	1	multi-exon	FALSE	canonical	3	79	junction_2	7.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTCCTGGTGGCTTT	-137177060	False	NA	0	True	ATTAAA	-17	NA	137177072	137174782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137175155_137175236_137175473_137175707
WTC11_00088928	chr9	-	2656	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	-1	0	1	multi-exon	FALSE	canonical	3	60	junction_11	12.6301557129488	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTCCTGGTGGCTTT	-137184227	True	NA	0	True	ATTAAA	-17	NA	137188560	137174782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
WTC11_00088930	chr9	-	747	5	FSM	ENSG00000176248.9	ENST00000495611.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	12.3161479367536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGACGGGACAGGGGACC	-137182176	False	NA	NA	False	NA	NA	NA	137186509	137181814	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223
WTC11_00088932	chr9	-	3356	3	FSM	ENSG00000176058.13	ENST00000477345.1	3350	3	0	-6	0	4	multi-exon	FALSE	canonical	3	162	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCCACTGCGTGGTCC	-137192955	False	NA	-7	True	AATAAA	-22	NA	137195137	137191612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137192175_137192258_137192366_137192450
WTC11_00088933	chr9	-	2668	4	FSM	ENSG00000176058.13	ENST00000409012.6	2659	4	0	-9	0	7	multi-exon	FALSE	canonical	3	136	junction_3	12.7540843131393	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCACTGCGTGGTCCTTG	-137196284	False	4457	-4	True	AATAAA	-25	NA	137200741	137191609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986
WTC11_00088934	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-137201191	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137204100_137205600
WTC11_00088935	chr9	-	1077	1	NIC	ENSG00000212864.4	novel	1135	2	NA	NA	258	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACTGAAGCTTGCTC	-137221298	False	NA	-10	True	ATTAAA	-26	NA	137221323	137220246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137220200_137221300
WTC11_00088936	chr9	-	2687	2	Genic_Genomic	ENSG00000198435.4	novel	2641	1	NA	NA	-32	8056	multi-exon	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCGCGTTAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	137302303	137291574	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_137291600_137299641
WTC11_00088937	chr9	-	2715	1	FSM	ENSG00000198435.4	ENST00000356628.4	2641	1	-9	-65	-9	65	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGTGCTGGGTGCAC	-137298985	True	NA	65	True	NA	NA	NA	137302280	137299565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137299600_137302300
WTC11_00088938	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_1	12.4638252063927	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421605	True	NA	-5	True	AATAAA	-14	NA	137423155	137366144	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
WTC11_00088939	chr9	-	1578	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	7	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	-137421605	True	NA	-2	True	AATAAA	-21	NA	137423155	137391801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137393236_137395302_137395405_137423113
WTC11_00088940	chr9	-	3574	14	FSM	ENSG00000165802.23	ENST00000371474.7	3571	14	0	-3	0	0	multi-exon	TRUE	canonical	3	90	junction_10	128.908664514773	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGACTCTGTGTTA	-137452317	True	NA	-9	True	TATAAA	-20	NA	137459334	137447569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137456410_137456487_137457406_137457902_137458487_137458550_137459031
WTC11_00088941	chr9	-	2981	15	FSM	ENSG00000165802.23	ENST00000265663.12	2981	15	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_10	71.2512441710204	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCGGCCGCCGCGTGGG	-137452317	True	NA	-31	True	ATTAAA	-11	NA	137459334	137448231	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137456410_137456487_137457406_137457902_137458487_137458550_137459031
WTC11_00088942	chr9	-	933	8	FSM	ENSG00000165802.23	ENST00000484316.5	933	8	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_6	41.9912527334259	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAAGGTGAGTTACCCA	-137447415	False	NA	NA	False	NA	NA	NA	137454432	137449606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137453181_137453730_137453821_137454390
WTC11_00088945	chr9	-	2293	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	9	0	-9	multi-exon	FALSE	canonical	3	100	junction_7	41.6863286941894	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAATAATTGAGGACAAC	-137575460	True	NA	NA	False	AATAAA	-10	NA	137578925	137554452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
WTC11_00088946	chr9	-	1311	2	FSM	ENSG00000148399.13	ENST00000467243.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137564982	False	NA	-9	True	ATTAAA	-18	NA	137564999	137554903	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137555649_137564433
WTC11_00088958	chr9	-	2845	5	ISM	ENSG00000165724.6	ENST00000298585.3	1395	6	44	0	44	0	intron_retention	FALSE	canonical	3	643	junction_3	30.2200264725232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCTCGGACATTCT	-137585223	True	NA	-21	True	AGTAAA	-13	NA	137590468	137582080	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658
WTC11_00088959	chr9	-	1409	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	-14	0	14	multi-exon	FALSE	canonical	3	583	junction_5	47.4510273861378	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTCTGCTCCGCCTCCC	-137585267	True	NA	-7	True	AGTAAA	-27	NA	137590512	137582066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
WTC11_00088961	chr9	-	1841	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-137618887	False	NA	0	True	AATAAA	-18	NA	137618906	137615331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137616200_137617933
WTC11_00088962	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	116	junction_2	46.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-137617133	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137616200_137617933_137618192_137618530
WTC11_00088964	chr9	+	4392	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	2751652	2756044	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2751700_2756000
WTC11_00088965	chr9	+	1934	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATGAAATAAATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	2768457	2770391	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2768500_2770400
WTC11_00088968	chr9	+	238	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGACCAGCTAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	6037848	6038086	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_6037800_6038100
WTC11_00088969	chr9	+	434	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATACACTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	6727660	6728094	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_6727700_6728100
WTC11_00088970	chr9	+	301	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCGTAGGCATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	8012786	8013087	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_8012800_8013100
WTC11_00088971	chr9	+	1015	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTTGGTTACTGT	NA	False	NA	NA	False	NA	NA	NA	17199203	17200218	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_17199200_17200200
WTC11_00088972	chr9	+	225	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGGTCTATGAATAAAA	NA	False	NA	NA	False	ATTAAA	-45	NA	21490518	21490743	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_21490500_21490700
WTC11_00088973	chr9	+	501	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCATCCTATCAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	23686242	23686743	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_23686200_23686700
WTC11_00088974	chr9	+	279	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGCTTTTTACTTG	NA	False	NA	NA	False	NA	NA	NA	25490586	25490865	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_25490600_25490900
WTC11_00088975	chr9	+	237	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGTCTAAAGGAACACT	NA	False	NA	NA	False	AGTAAA	-11	NA	34921391	34921628	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_34921400_34921600
WTC11_00088976	chr9	+	284	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCAACGGGCAAAAAGCA	NA	False	NA	NA	False	AATAAA	-42	NA	35970927	35971211	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_35970900_35971200
WTC11_00088977	chr9	+	1105	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGAGAGAAAACATTCCT	36681069	False	NA	92	True	AATAAA	-3	NA	36681098	36682203	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_36681100_36682200
WTC11_00088978	chr9	+	278	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGGCTCTTTCATGT	NA	False	NA	NA	False	NA	NA	NA	69010657	69010935	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_69010700_69010900
WTC11_00088979	chr9	+	1949	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAG	NA	False	NA	NA	False	ACTAAA	-31	NA	70784386	70786335	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_70784400_70786300
WTC11_00088980	chr9	+	230	1	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCCGTAGCGTTTCTGT	82887057	False	NA	NA	False	NA	NA	NA	82887096	82887326	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_82887100_82887300
WTC11_00088981	chr9	+	10178	1	FSM	ENSG00000288968.1	ENST00000692245.1	219	1	-14	-9945	-14	9945	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGGGTGTATCTGATG	87410840	False	NA	46	True	AAGAAA	-38	NA	87410877	87421055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87410900_87421100
WTC11_00088982	chr9	+	292	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTGTTTATTTTCAT	NA	False	NA	NA	False	NA	NA	NA	88850048	88850340	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_88850000_88850300
WTC11_00088983	chr9	+	1002	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTCGCCCTCCTCTGGC	89309932	False	NA	NA	False	NA	NA	NA	89309945	89310947	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_89309900_89310900
WTC11_00088984	chr9	+	275	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGCCTGTAAACTCT	90415291	False	NA	NA	False	AAAAAG	-39	NA	90415353	90415628	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_90415400_90415600
WTC11_00088985	chr9	+	300	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTCTTACAGACTAAGA	NA	False	NA	NA	False	NA	NA	NA	97051496	97051796	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97051500_97051800
WTC11_00088986	chr9	+	224	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCATTTGTTGATTTTG	NA	False	NA	NA	False	NA	NA	NA	97964598	97964822	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97964600_97964800
WTC11_00088987	chr9	+	602	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCGGCCATGTCTTCCA	NA	False	NA	NA	False	ACTAAA	-34	NA	103204390	103204992	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_103204400_103205000
WTC11_00088988	chr9	+	233	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATCCTTCCAAACCAAG	NA	False	NA	96	True	NA	NA	NA	103205727	103205960	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_103205700_103206000
WTC11_00088989	chr9	+	258	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAATAATGATAATAAA	NA	False	NA	NA	False	AATAAA	-23	NA	107117654	107117912	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_107117700_107117900
WTC11_00088990	chr9	+	208	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCCTGGGCAATGGAAT	NA	False	NA	NA	False	NA	NA	NA	108594899	108595107	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_108594900_108595100
WTC11_00088991	chr9	+	2811	1	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGCATGGTGGTGCAC	NA	False	NA	NA	False	AATACA	-28	NA	109081118	109083929	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_109081100_109083900
WTC11_00088992	chr9	+	289	1	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAGAAAA	111485005	False	NA	NA	False	NA	NA	NA	111485041	111485330	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_111485000_111485300
WTC11_00088993	chr9	+	9289	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112987508	112996797	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_112987500_112996800
WTC11_00088996	chr9	+	292	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCTTCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	127725286	127725578	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_127725300_127725600
WTC11_00088999	chr9	+	277	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTTCCTAGGTATAT	NA	False	NA	NA	False	NA	NA	NA	133185372	133185649	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_133185400_133185600
WTC11_00089000	chr9	+	2055	8	FSM	ENSG00000107099.18	ENST00000684637.1	2958	8	903	0	903	0	multi-exon	FALSE	canonical	2	2	junction_7	2.2314999074019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATGACTGTGACCT	NA	False	NA	-50	True	ATTAAA	-9	NA	441284	465196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_441418_441874_442010_443426_443517_446369_446607_449783_449928_452010_452118_463516_463688_464158
WTC11_00089001	chr9	+	742	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	-16	45	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	16.9022927438854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGACTAAGCTCTGAT	469377	True	NA	2	True	AATAAA	-13	NA	470274	475510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_470375_470555_470678_471445_471587_473193_473274_475211
WTC11_00089002	chr9	+	753	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	-16	51	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	12.9687123493429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAAGCTCTGATCTTTTC	469377	True	NA	8	True	AATAAA	-19	NA	470274	475516	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_470375_470555_470683_471445_471587_473193_473274_475211
WTC11_00089003	chr9	+	674	1	FSM	ENSG00000235330.2	ENST00000598100.1	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCTGCATGAGTGC	476852	False	NA	NA	False	AATAAA	-44	NA	477749	478423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_477700_478400
WTC11_00089005	chr9	+	812	3	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	2274254	False	NA	7	True	ACTAAA	-15	NA	2276018	2281482	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2276254_2278009_2278113_2281008
WTC11_00089006	chr9	+	1465	2	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGTGTAATCCCATTC	2274253	False	NA	40	True	AATACA	-25	NA	2276017	2288936	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2276254_2287707
WTC11_00089007	chr9	+	9213	19	FSM	ENSG00000147852.17	ENST00000382100.8	9213	19	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_16	46.2856135823147	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCCTTTCCTTTCTC	2620746	True	NA	NA	False	AATAAA	-19	NA	2621786	2660056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
WTC11_00089010	chr9	+	475	3	FSM	ENSG00000147852.17	ENST00000680150.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	17	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGCAAGGCAGTAGGTA	2643691	False	NA	NA	False	NA	NA	NA	2643713	2645065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2643960_2644733_2644854_2644956
WTC11_00089011	chr9	+	1308	3	NNC	ENSG00000236924.2	novel	906	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	44	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGTTTTAGATATGTA	6643548	True	NA	10	True	AATAAA	-21	NA	6645844	6670880	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_6646086_6669543_6669729_6669998
WTC11_00089012	chr9	+	4716	23	NIC	ENSG00000107077.19	novel	4338	22	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_19	25.3106321369806	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	6757357	True	NA	6	True	AATAAA	-18	NA	6757693	7175648	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7105401_7105501_7128065_7128237_7165237_7165358_7169797_7169891_7174552
WTC11_00089013	chr9	+	465	2	FSM	ENSG00000107165.13	ENST00000473504.1	791	2	326	0	326	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTTAGCATTAAAGTT	NA	False	NA	NA	False	AATACA	-3	NA	12707996	12709294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_12708144_12708976
WTC11_00089014	chr9	+	690	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	7.66077672302228	74	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTCTTCTGCCTGGTT	14993219	True	NA	15	True	AATAAA	-20	NA	14993333	15019726	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_14993350_14997163_14997324_15001633_15001733_15017354_15017528_15019484
WTC11_00089016	chr9	+	430	3	FSM	ENSG00000234779.1	ENST00000450445.1	428	3	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	16	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726407	True	NA	4	True	AATAAA	-17	NA	16726811	16727524	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_16726956_16727030_16727107_16727314
WTC11_00089017	chr9	+	487	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	16	0	intron_retention	FALSE	canonical	3	32	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726425	True	NA	4	True	AATAAA	-17	NA	16726829	16727524	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_16727107_16727314
WTC11_00089018	chr9	+	4543	25	NNC	ENSG00000044459.15	novel	5518	26	NA	NA	12	-765	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	26.4976086447228	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTCTCATTGATGTGC	17132862	True	NA	7	True	AATAAA	-18	NA	17135051	17503158	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189_17298353_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616_17366718_17388161_17388254_17394533_17395070_17409295_17409474_17415787_17415882_17415965_17416190_17457523_17457716_17462915_17463014_17464496_17464624_17465980_17466119_17466705_17466892_17484294_17484481_17486988_17487067_17502550
WTC11_00089019	chr9	+	263	2	FSM	ENSG00000107295.10	ENST00000467085.1	282	2	19	0	19	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTTTTCACCTTGTG	17578498	True	NA	NA	False	TATAAA	-34	NA	17579100	17630429	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17579288_17630353
WTC11_00089020	chr9	+	866	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	-42	0	2	0	multi-exon	FALSE	canonical	2	3	junction_2	1.4142135623731	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTATGTACTAGACT	18473907	True	NA	NA	False	AATAAA	-18	NA	18474101	18574527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
WTC11_00089021	chr9	+	2906	16	FSM	ENSG00000178031.18	ENST00000276935.6	2906	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	2.76807193227023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAATAGTGTGTTGTTTT	18474038	False	NA	NA	False	AATAAA	-16	NA	18474232	18723917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029_18574267_18622242_18622370_18635942_18636018_18639253_18639412_18657638_18657751_18661934_18662074_18675856_18675908_18680311_18680517_18681811_18681960_18684715_18684801_18706746_18707049_18721535_18721666_18723017
WTC11_00089022	chr9	+	5437	6	FSM	ENSG00000260912.1_ENSG00000177076.6	ENST00000340967.3	2773	6	4	-2668	4	0	multi-exon	FALSE	canonical	2	6	junction_1	2.57681974534503	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTCCTTGTTGGTTT	19408290	True	NA	10	True	ATTAAA	-15	NA	19409012	19455173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19409193_19423861_19423977_19424699_19424842_19434946_19435085_19446280_19446419_19450449
WTC11_00089023	chr9	+	5904	44	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	40.2639479643855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	20656371	True	NA	12	True	AGTAAA	-12	NA	20658312	20995948	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658460_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00089024	chr9	+	570	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	10	-96200	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGTAAAAGTTTTTC	20656377	True	NA	21	True	AATAAA	-29	NA	20658318	20673912	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_20658460_20658690_20658827_20673619
WTC11_00089025	chr9	+	5797	43	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	47.2545874148324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGACTTTTGTTT	20656378	True	NA	17	True	AGTAAA	-17	NA	20658319	20995953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658460_20715321_20715411_20717793_20717869_20720379_20720535_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
WTC11_00089026	chr9	+	607	1	FSM	ENSG00000229835.2	ENST00000427983.2	1768	1	764	397	764	-397	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCGCCTACTACTCAC	NA	False	NA	NA	False	NA	NA	NA	21695939	21696546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21695900_21696500
WTC11_00089027	chr9	+	6202	8	NIC	ENSG00000099810.21	novel	753	7	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	110.456012114529	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	21803055	False	NA	6	True	ATTAAA	-17	NA	21803065	21867081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_21803382_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
WTC11_00089028	chr9	+	2142	20	NNC	ENSG00000096872.17	novel	5325	20	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.1006716084091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTTCTTTTCTTTTTAT	26954224	True	NA	16	True	AATAAA	-22	NA	26956411	27062933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_26956517_26961948_26962088_26978127_26978282_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
WTC11_00089030	chr9	+	4677	23	NIC	ENSG00000120156.22	novel	4683	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	3.21444312877039	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	27109027	True	NA	14	True	AATAAA	-23	NA	27109227	27230174	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205063_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
WTC11_00089032	chr9	+	424	1	FSM	ENSG00000215210.3	ENST00000434705.1	1168	1	618	126	618	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACCCCTTCTATGGAA	NA	False	NA	NA	False	AAGAAA	-4	NA	30689722	30690146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_30689700_30690100
WTC11_00089033	chr9	+	405	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	-81	344	-63	-339	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCCACTGGAACCCCAT	32552228	False	NA	NA	False	NA	NA	NA	32552263	32552668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32552300_32552700
WTC11_00089036	chr9	+	1180	8	FSM	ENSG00000230453.10	ENST00000357927.7	2898	8	0	1718	0	-1710	multi-exon	FALSE	canonical	2	2	junction_3	2.82120252259021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTGCCAAAATGTATT	NA	False	NA	NA	False	AAGAAA	-2	NA	33548831	33571291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33548856_33550429_33550580_33555707_33555821_33558057_33558188_33566218_33566501_33567102_33567315_33568670_33568894_33571245
WTC11_00089037	chr9	+	761	1	FSM	ENSG00000234373.1	ENST00000454116.1	635	1	-114	-12	-114	12	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGATACTCGATTGTGC	NA	False	NA	NA	False	NA	NA	NA	33576265	33577026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33576300_33577000
WTC11_00089038	chr9	+	2296	2	FSM	ENSG00000226562.4	ENST00000669639.1	1381	2	-915	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCGGCCAATCTCTGT	NA	False	NA	0	True	AATAAA	-13	NA	33602385	33605288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33604404_33605010
WTC11_00089039	chr9	+	1035	3	FSM	ENSG00000281128.2	ENST00000667902.1	1786	3	0	751	0	-751	multi-exon	FALSE	canonical	2	4	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTCAGAAAATTAAAAAT	33676951	False	NA	NA	False	NA	NA	NA	33676962	33681183	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33677510_33678089_33678288_33680893
WTC11_00089040	chr9	+	358	1	FSM	ENSG00000229207.1	ENST00000419794.1	1249	1	-295	1186	-295	-1186	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGCCACAGCAGC	NA	False	NA	NA	False	NA	NA	NA	34318111	34318469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34318100_34318500
WTC11_00089042	chr9	+	626	4	FSM	ENSG00000122735.16	ENST00000442556.1	656	4	0	30	0	-30	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCACAAATAAACCTGTG	NA	False	NA	NA	False	NA	NA	NA	34513111	34520954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34513192_34514393_34514543_34514639_34514740_34520657
WTC11_00089045	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	34665151	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34665768_34678095_34678269_34680905
WTC11_00089047	chr9	+	5709	8	FSM	ENSG00000122733.12	ENST00000242315.3	5718	8	0	9	0	-9	multi-exon	TRUE	canonical	0	0	junction_4	1.16057691494799	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGCTCTGTCGGCTTCC	NA	False	NA	NA	False	AATAAA	-7	NA	34958323	34982535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34958402_34971294_34971677_34972345_34972532_34976151_34976231_34976534_34976741_34977082_34977244_34977545_34977642_34978014
WTC11_00089048	chr9	+	447	1	Genic_Genomic	ENSG00000179766.19	novel	NA	NA	NA	NA	17044	82	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTAGGAAGAATAGTCAC	NA	False	NA	88	True	NA	NA	NA	35450750	35451197	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_35450800_35451200
WTC11_00089049	chr9	+	5639	12	FSM	ENSG00000198853.12	ENST00000455600.1	5636	12	-6	3	-6	0	multi-exon	FALSE	canonical	1	1	junction_1	9.18586769386846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	NA	False	NA	19	True	AATAAA	-21	NA	35538625	35561895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35539109_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
WTC11_00089050	chr9	+	697	7	FSM	ENSG00000107159.14	ENST00000493245.1	697	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.21455025366432	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATTTATAATAAA	35676119	False	NA	NA	False	AAGAAA	-8	NA	35676162	35681138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35676207_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
WTC11_00089051	chr9	+	299	2	FSM	ENSG00000107159.14	ENST00000485665.1	329	2	30	0	30	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTAGTCACCTTTGT	35680687	False	NA	NA	False	AATAAA	-15	NA	35680730	35681159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35680835_35680964
WTC11_00089052	chr9	+	468	3	FSM	ENSG00000227388.3	ENST00000431981.2	472	3	0	4	0	-4	multi-exon	FALSE	canonical	3	4	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGCATTGTCCTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	35772310	35790428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35772377_35786646_35786776_35790155
WTC11_00089053	chr9	+	4208	22	FSM	ENSG00000159899.16	ENST00000342694.7	4248	22	28	12	28	0	multi-exon	FALSE	canonical	2	7	junction_1	10.0443461155462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATGTCATAGTGTGG	35791277	True	NA	6	True	AATAAA	-5	NA	35791618	35809719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35793076_35793897_35794104_35799617_35799732_35800021_35800158_35800388_35800484_35800708_35800842_35801069_35801155_35801642_35801764_35801925_35802001_35802205_35802284_35802502_35802608_35802731_35802804_35805510_35805671_35805829_35805986_35806064_35806234_35806391_35806539_35807022_35807147_35807329_35807399_35808508_35808684_35808754_35808854_35809155_35809248_35809379
WTC11_00089054	chr9	+	3502	21	FSM	ENSG00000159899.16	ENST00000464810.5	3502	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9.72830920561225	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGGATAGGGGCAATC	35792067	False	NA	19	True	AATAAA	-18	NA	35792408	35809732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35793076_35793897_35794104_35799617_35799732_35800021_35800158_35800388_35800484_35800708_35800842_35801069_35801155_35801642_35801764_35801925_35802001_35802205_35802284_35802502_35802608_35802731_35802804_35805510_35805671_35805829_35805986_35806064_35806234_35806391_35806539_35807022_35807147_35807329_35807399_35808508_35808854_35809155_35809248_35809379
WTC11_00089055	chr9	+	588	3	FSM	ENSG00000159899.16	ENST00000469249.1	601	3	13	0	13	0	multi-exon	FALSE	canonical	3	42	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGTAAACCCCCATTC	NA	False	NA	NA	False	NA	NA	NA	35808413	35809435	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35808854_35809155_35809248_35809379
WTC11_00089056	chr9	+	14114	14	FSM	ENSG00000137103.20	ENST00000377991.9	14112	14	-2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8196327201815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTGGAATTTTTT	35828755	True	NA	24	True	AATAAA	-37	NA	35829229	35865518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35829320_35829876_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
WTC11_00089058	chr9	+	1148	11	FSM	ENSG00000122707.12	ENST00000475774.5	1128	11	-20	0	-9	0	multi-exon	FALSE	canonical	1	3	junction_7	81.2923120596284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	36033511	True	NA	4	True	ATTAAA	-13	NA	36036903	36086181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36037099_36052264_36052324_36056979_36057014_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36066768_36066871_36080604_36080639_36083364_36083563_36085901
WTC11_00089059	chr9	+	759	7	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-8	-19153	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	69.679424669139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTCAATATAAGACTCAA	36033512	True	NA	NA	False	ATTAAA	-16	NA	36036904	36067028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36066768
WTC11_00089060	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	124.432835747824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568320	True	NA	9	True	AATAAA	-16	NA	36572894	36677681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00089062	chr9	+	4050	3	FSM	ENSG00000281649.3	ENST00000664382.1	4067	3	17	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	57	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTCAGAGAAGGCAAACC	37074722	True	NA	-9	True	AATAAA	-3	NA	37079890	37090378	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080035_37080341_37080537_37086667
WTC11_00089064	chr9	+	3568	9	NIC	ENSG00000147905.18	novel	2828	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	51.2224011053758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATGTGTTTATTATG	37115105	False	NA	4	True	AATAAA	-13	NA	37120635	37358146	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_37121673_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
WTC11_00089068	chr9	+	1459	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	-16	0	-2	0	multi-exon	FALSE	canonical	2	9	junction_4	15.7950743904548	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	37751969	True	NA	-5	True	AATAAA	-5	NA	37753800	37778022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
WTC11_00089070	chr9	+	2236	6	NIC	ENSG00000122741.16	novel	7906	7	NA	NA	11	762	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	31.9812445036149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTACTTGTATGAAT	37799031	True	NA	NA	False	NA	NA	NA	37800807	37862203	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_37801406_37819287_37819402_37854779_37854983_37857240_37857352_37860047_37860194_37861139
WTC11_00089071	chr9	+	4581	1	FSM	ENSG00000213839.4	ENST00000436507.2	708	1	-3819	-54	-3819	54	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAGCCTGAGACTACAG	NA	False	NA	NA	False	NA	NA	NA	37881863	37886444	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37881900_37886400
WTC11_00089072	chr9	+	3437	2	FSM	ENSG00000204860.5	ENST00000377680.3	3437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTCTCCTTTTGTAAG	38621074	False	NA	NA	False	GATAAA	-16	NA	38621087	38624990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38621366_38621831
WTC11_00089074	chr9	+	1237	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1065	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	11.8743420870379	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	40990868	True	NA	NA	False	AATAAA	-35	NA	40992260	41014139	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
WTC11_00089075	chr9	+	1378	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	2	-1065	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	15.6	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	40990897	True	NA	NA	False	AATAAA	-35	NA	40992289	41014139	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
WTC11_00089076	chr9	+	760	2	NNC	ENSG00000288891.1	novel	819	2	NA	NA	18	-9768	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCATGTTGATACCAT	41358861	True	NA	NA	False	AATAAA	-14	NA	41358903	41373829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_41359153_41373318
WTC11_00089077	chr9	+	1109	1	FSM	ENSG00000268234.1	ENST00000457486.2	1332	1	167	56	167	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGTGGAAGAGCAACACG	NA	False	NA	NA	False	NA	NA	NA	42384971	42386080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_42385000_42386100
WTC11_00089079	chr9	+	1728	9	FSM	ENSG00000283378.1	ENST00000636699.1	1728	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.98826978350174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGAAGGCAACTGAAT	61330683	False	NA	NA	False	NA	NA	NA	61330716	61453030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_61331053_61352013_61352125_61379874_61380069_61425701_61425850_61440604_61440809_61441462_61441648_61442872_61443017_61447337_61447600_61452886
WTC11_00089080	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62376814_62432875_62432980_62434066
WTC11_00089081	chr9	+	682	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	-2	4186	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	62532375	62538910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62532689_62538541
WTC11_00089082	chr9	+	1582	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	-15	0	-11	0	multi-exon	FALSE	canonical	3	36	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897356	62899777	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897735_62897849_62897980_62898703
WTC11_00089083	chr9	+	893	2	NNC	ENSG00000170161.7	novel	1604	2	NA	NA	14	3877	intron_retention	FALSE	canonical	3	71	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTTCCAGTTCTTTT	62897448	True	NA	NA	False	AATAAA	-27	NA	62897462	62903981	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62897980_62903605
WTC11_00089085	chr9	+	448	2	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTCTGTGTCTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	64448668	64469260	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_64448813_64468956
WTC11_00089086	chr9	+	1369	16	NNC	ENSG00000147996.17	novel	1411	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	635.281334003553	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	65669548	True	NA	4	True	AATAAA	-20	NA	65675900	65733674	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65702969_65703015_65703879_65703926_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089087	chr9	+	1346	15	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_10	590.489955676726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	65669553	True	NA	2	True	AATAAA	-18	NA	65675905	65733672	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089088	chr9	+	1206	14	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_7	584.826975879171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669573	True	NA	0	True	AATAAA	-16	NA	65675925	65733670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089089	chr9	+	1235	15	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	87	junction_14	571.181826191475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669589	True	NA	0	True	AATAAA	-16	NA	65675941	65733670	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65733509
WTC11_00089090	chr9	+	703	6	NNC	ENSG00000147996.17	novel	722	4	NA	NA	-4445	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	688.309407170932	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65714758	True	NA	0	True	AATAAA	-16	NA	65714939	65733670	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_65715165_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089091	chr9	+	905	6	NNC	ENSG00000147996.17	novel	722	4	NA	NA	-4363	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	696.225078548597	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTTGATGTTGACG	65714840	True	NA	NA	False	AATAAA	-14	NA	65715021	65734039	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_65715080_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089092	chr9	+	3992	5	FSM	ENSG00000274349.5	ENST00000621410.5	4016	5	24	0	11	0	multi-exon	FALSE	canonical	1	2	junction_4	4.84767985741633	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCTAGGTATT	66900662	True	NA	NA	False	AATAAA	-20	NA	66900748	66921426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_66900837_66903517_66903577_66908237_66908365_66908638_66908735_66917804
WTC11_00089093	chr9	+	4154	5	FSM	ENSG00000274349.5	ENST00000612867.4	4160	5	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	5.40254569624358	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCTAGGTATT	66900657	True	NA	NA	False	AATAAA	-20	NA	66900743	66921426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_66900837_66903360_66903577_66908237_66908365_66908638_66908735_66917804
WTC11_00089094	chr9	+	1623	14	NIC	ENSG00000196873.16	novel	2437	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	441.737934036532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGTCACCATTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	68241944	68299964	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68266219_68266307_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00089095	chr9	+	1819	16	FSM	ENSG00000196873.16	ENST00000377344.6	1813	16	-6	0	0	0	multi-exon	FALSE	canonical	2	26	junction_10	485.240311598284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	68241982	68299965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68260856_68260997_68264467_68264515_68268933_68268979_68269599_68269723_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00089097	chr9	+	4897	26	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	140.675024080325	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGTGGTGGATTTG	69119842	False	NA	14	True	AATAAA	-24	NA	69121292	69255204	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121366_69121483_69121726_69151650_69151772_69185086_69185205_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
WTC11_00089098	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.4764045897475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	-25	True	NA	NA	NA	69324566	69392558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
WTC11_00089099	chr9	+	934	1	FSM	ENSG00000274421.1	ENST00000622201.1	1246	1	86	226	86	-226	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCATACCTCCAGGACA	NA	False	NA	NA	False	NA	NA	NA	70310960	70311894	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70311000_70311900
WTC11_00089100	chr9	+	333	1	FSM	ENSG00000229814.1	ENST00000437667.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAACGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	71589600	71589933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71589600_71589900
WTC11_00089101	chr9	+	1107	4	FSM	ENSG00000155621.15	ENST00000377031.7	1107	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	38.7327022323801	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTGCTGGGCTTACA	71910426	False	NA	NA	False	NA	NA	NA	71911544	71983250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71982656
WTC11_00089102	chr9	+	344	4	FSM	ENSG00000135046.14	ENST00000468639.5	800	4	0	456	0	-456	multi-exon	FALSE	canonical	2	29	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAGAGTGGTAAATT	73151549	True	NA	NA	False	NA	NA	NA	73151864	73159423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328
WTC11_00089103	chr9	+	635	3	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTCTAATTATTTCTA	74085891	False	NA	1	True	ATTAAA	-16	NA	74085938	74100721	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_74086181_74099449_74099541_74100419
WTC11_00089104	chr9	+	5684	20	NIC	ENSG00000099139.14	novel	5756	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	12.5909434100737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGTTCATACCCAC	75888822	True	NA	12	True	ATTAAA	-21	NA	75890672	76195889	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
WTC11_00089105	chr9	+	1044	1	FSM	ENSG00000204612.1	ENST00000376708.1	1299	1	564	-309	564	309	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAAGGAGGTTAGGAAAG	77020179	False	NA	NA	False	TATAAA	-23	NA	77020218	77021262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_77020200_77021300
WTC11_00089106	chr9	+	2577	16	NIC	ENSG00000148019.14	novel	2684	16	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_15	62.5805791670938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGGCATATGGTGTC	78231283	True	NA	1	True	AATAAA	-14	NA	78236066	78267064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266616
WTC11_00089107	chr9	+	2581	16	NIC	ENSG00000148019.14	novel	2626	16	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_15	70.9249995104375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGGCATATGGTGTCT	78231283	True	NA	2	True	AATAAA	-15	NA	78236066	78267065	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266616
WTC11_00089108	chr9	+	1433	7	NIC	ENSG00000106829.20	novel	873	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	76.0432990692364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAACTCTCTTGGAAT	79567237	True	NA	NA	False	ATTAAA	-38	NA	79571952	79652794	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652589
WTC11_00089109	chr9	+	1405	7	ISM	ENSG00000106829.20	ENST00000376537.8	2793	21	-637	72549	13	0	5prime_fragment	FALSE	canonical	3	99	junction_6	59.8609499868932	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAACTCTCTTGGAAT	79567262	True	NA	NA	False	ATTAAA	-38	NA	79571977	79652794	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592
WTC11_00089113	chr9	+	3942	19	NIC	ENSG00000106829.20	novel	967	11	NA	NA	0	-72	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	59.9016683953228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATTAAAAATGCCTAG	79573265	False	NA	79	True	NA	NA	NA	79573296	79726810	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_79573371_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
WTC11_00089115	chr9	+	2671	2	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCCCAAAAAACTTGTC	NA	False	NA	NA	False	NA	NA	NA	80137672	80142126	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_80137890_80139672
WTC11_00089116	chr9	+	792	3	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	2	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	81009333	True	NA	5	True	AATAAA	-18	NA	81009392	81015241	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_81009629_81011358_81011538_81014864
WTC11_00089118	chr9	+	3524	2	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAGTCTCTCAC	82886205	False	NA	NA	False	CATAAA	-42	NA	82886244	82927080	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_82886295_82923606
WTC11_00089119	chr9	+	827	4	FSM	ENSG00000148057.16	ENST00000405990.3	629	4	-198	0	-81	0	multi-exon	FALSE	canonical	3	4	junction_1	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATGTTTCTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	83622967	83643870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_83623222_83628872_83628960_83641547_83641592_83643428
WTC11_00089120	chr9	+	3244	3	NNC	ENSG00000178966.17	novel	3420	3	NA	NA	14307	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	125.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	NA	False	NA	110	True	ATTAAA	-21	NA	83995111	84004074	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_83995143_83999708_83999798_84000950
WTC11_00089121	chr9	+	753	2	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACACTAACGAATGTTTT	85458029	True	NA	8	True	AATAAA	-20	NA	85458627	85482811	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85458922_85482352
WTC11_00089123	chr9	+	1988	10	FSM	ENSG00000165121.12	ENST00000637846.2	1955	10	-49	16	-49	-16	multi-exon	FALSE	canonical	2	5	junction_1	1.8324913891634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGAATTTTGAGTAC	85805292	False	NA	0	True	AGTAAA	-5	NA	85805309	85849712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_85805599_85806001_85806134_85822879_85823081_85829462_85829607_85837758_85837966_85840076_85840263_85840749_85840850_85842723_85842880_85845841_85846048_85849345
WTC11_00089124	chr9	+	1578	9	FSM	ENSG00000165121.12	ENST00000431724.2	1695	9	287	-170	287	-16	multi-exon	FALSE	canonical	0	0	junction_1	3.01817411691241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGAATTTTGAGTAC	NA	False	NA	0	True	AGTAAA	-5	NA	85816252	85849712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_85816264_85822879_85823081_85829462_85829607_85837758_85837966_85840076_85840263_85840749_85840850_85842723_85842880_85845841_85846048_85849345
WTC11_00089125	chr9	+	3958	23	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	7	-1808	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	58.1201555343656	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCATTTTTTAGCTACT	85937617	True	NA	NA	False	NA	NA	NA	85941188	86023654	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_85941270_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
WTC11_00089128	chr9	+	5899	25	FSM	ENSG00000196730.13	ENST00000469640.6	5899	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_21	102.076870543723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	87497649	False	NA	18	True	AATAAA	-18	NA	87497680	87708633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87698655_87698795_87700116_87700238_87703028_87703218_87706131
WTC11_00089131	chr9	+	1662	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	151	0	151	0	multi-exon	FALSE	canonical	3	8	junction_1	65.8870400064863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	NA	False	NA	33	True	AATAAA	-18	NA	87725885	87731393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
WTC11_00089132	chr9	+	1897	7	FSM	ENSG00000135047.16	ENST00000678649.1	1897	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	51.4252423966631	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAATTTTTACCTGTT	87723395	True	NA	-12	True	TTTAAA	-5	NA	87726118	87731348	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380
WTC11_00089134	chr9	+	2741	6	FSM	ENSG00000135047.16	ENST00000482054.2	2786	6	0	45	0	9	multi-exon	FALSE	canonical	3	64	junction_1	53.9021335384788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTATTTTTGATGC	87723395	True	NA	42	True	AATAAA	-27	NA	87726118	87731402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572
WTC11_00089135	chr9	+	1000	3	FSM	ENSG00000130045.17	ENST00000649870.2	989	3	-6	-5	-6	5	multi-exon	FALSE	canonical	1	1	junction_1	0.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTGCCTTCTTTCT	88533930	True	NA	NA	False	AATAAA	-28	NA	88534026	88544978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88534089_88535398_88535737_88544378
WTC11_00089136	chr9	+	1238	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-77	-7	-4	7	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	88535004	False	NA	NA	False	AATAAA	-30	NA	88535100	88544980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88535737_88544378
WTC11_00089138	chr9	+	3329	17	NNC	ENSG00000187742.15	novel	3481	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_6	78.7888545020804	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308902	True	NA	15	True	AATAAA	-15	NA	89318513	89359642	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334638_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00089139	chr9	+	3198	17	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	87.9532679537833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308915	True	NA	15	True	AATAAA	-15	NA	89318526	89359642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00089141	chr9	+	584	1	FSM	ENSG00000231799.2	ENST00000438325.2	1197	1	411	202	411	-202	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAACCAGTGGTCCCTTC	NA	False	NA	NA	False	TTTAAA	-35	NA	89449968	89450552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89450000_89450600
WTC11_00089142	chr9	+	1527	3	FSM	ENSG00000130222.11	ENST00000375769.1	977	3	-60	-490	-34	170	multi-exon	FALSE	canonical	3	91	junction_1	11.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGTAGAACTTGAGCCTG	89604967	False	NA	NA	False	NA	NA	NA	89604977	89606725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89605534_89605666_89605881_89605968
WTC11_00089145	chr9	+	1258	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	44.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCAATCCAGTTGCATA	90412949	True	NA	10	True	AATAAA	-21	NA	90413068	90429448	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_90413293_90427768_90427834_90428479
WTC11_00089146	chr9	+	5142	13	FSM	ENSG00000165025.15	ENST00000375751.8	4936	13	-206	0	-206	0	multi-exon	FALSE	canonical	2	11	junction_8	6.37867541108654	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	NA	False	NA	14	True	AATAAA	-14	NA	90801580	90898549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_90801894_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
WTC11_00089148	chr9	+	3088	3	FSM	ENSG00000188312.14	ENST00000375576.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAATGCTCGCATGAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	92610543	92615164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92611394_92612522_92612615_92613018
WTC11_00089149	chr9	+	5448	8	ISM	ENSG00000288271.1	ENST00000473204.5	2370	11	-194	47802	-194	-47802	5prime_fragment	TRUE	canonical	3	6	junction_7	5.98637909707342	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTATGGCATTTAATA	92808607	True	NA	NA	False	AATAGA	-16	NA	92809193	92840891	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_92809871_92813595_92813711_92813873_92814048_92818317_92818425_92819241_92819380_92822209_92822278_92826524_92826579_92836776
WTC11_00089150	chr9	+	905	6	FSM	ENSG00000187984.13	ENST00000465736.6	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.16653333119993	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACTTCTGATAGTAAA	92809551	True	NA	NA	False	CATAAA	-41	NA	92809567	92822277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92809871_92813595_92813711_92813873_92814048_92818317_92818425_92819241_92819380_92822209
WTC11_00089152	chr9	+	3174	18	FSM	ENSG00000127084.19	ENST00000375482.8	3246	18	72	0	72	0	multi-exon	TRUE	canonical	1	1	junction_1	4.90533217397397	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCGCAGCCTCGGTGAT	92947520	True	NA	5	True	AATAAA	-16	NA	92947594	93036233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92947730_92975237_92975406_92976207_92976710_93002924_93003015_93004000_93004138_93006023_93006181_93010245_93010385_93011213_93011273_93013851_93013999_93015736_93015830_93018135_93018216_93019830_93019862_93020316_93020425_93022326_93022390_93029873_93029997_93032768_93032874_93034540_93034682_93035337
WTC11_00089153	chr9	+	1078	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	-2	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_3	35.6931365951495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	93057875	True	NA	29	True	AATAAA	-38	NA	93058685	93085132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
WTC11_00089154	chr9	+	1114	5	FSM	ENSG00000157303.11	ENST00000375469.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	32.6295494912204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	NA	False	NA	29	True	AATAAA	-38	NA	93069099	93085132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93069149_93075783_93075973_93077845_93077994_93079470_93079603_93084536
WTC11_00089155	chr9	+	778	5	NIC	ENSG00000165233.18	novel	660	5	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	114.727939055838	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	93094993	True	NA	27	True	NA	NA	NA	93096170	93113207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93096353_93107673_93107828_93110567_93110722_93112217_93112290_93112991
WTC11_00089156	chr9	+	6862	26	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	38	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	9.13332360096805	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATCTGGGCTGGAGTTT	93182663	True	NA	21	True	AGTAAA	-13	NA	93184176	93309191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93308720
WTC11_00089157	chr9	+	4567	3	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	41	junction_2	9	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGAGGTATTG	93347803	False	NA	10	True	AATAAA	-18	NA	93347948	93364642	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93350155_93357246_93357287_93362321
WTC11_00089158	chr9	+	3741	3	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	29.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTGAGGTATTGTCA	93349445	False	NA	13	True	AATAAA	-21	NA	93349461	93364645	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93350155_93357246_93357287_93361637
WTC11_00089159	chr9	+	4478	18	NNC	ENSG00000048828.17	novel	5160	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	22.5934430271278	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93452346	False	NA	22	True	AATAAA	-24	NA	93452363	93566112	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515669_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
WTC11_00089160	chr9	+	2300	3	ISM	ENSG00000048828.17	ENST00000652239.1	841	6	4480	-1741	4480	0	3prime_fragment	FALSE	canonical	3	97	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93560910	False	NA	22	True	AATAAA	-24	NA	93560931	93566112	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_93561251_93562207_93562305_93564228
WTC11_00089161	chr9	+	713	1	FSM	ENSG00000227666.1	ENST00000445119.1	316	1	-405	8	-405	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAATTATTGACCACT	94037175	False	NA	NA	False	AAAAAG	-7	NA	94037624	94038337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94037600_94038300
WTC11_00089162	chr9	+	549	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	-37	-3	-5	3	multi-exon	FALSE	canonical	2	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCGGGTATTTTGT	94165826	True	NA	NA	False	AATAAA	-20	NA	94166252	94200905	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94166382_94200485
WTC11_00089163	chr9	+	4489	5	NNC	ENSG00000175787.17	novel	2716	4	NA	NA	-4454	2134	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.49583217528247	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCTGGCTATGTACC	NA	False	NA	6	True	AATAAA	-18	NA	94274303	94303963	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_94274333_94278757_94278846_94292340_94292468_94292973_94293070_94299814
WTC11_00089164	chr9	+	3088	3	FSM	ENSG00000175787.17	ENST00000481550.6	1696	3	0	-1392	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGTGAATATAATG	NA	False	NA	3	True	AATAAA	-19	NA	94278757	94295846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94278846_94292340_94292468_94292973
WTC11_00089165	chr9	+	2996	16	NIC	ENSG00000148120.18	novel	3130	17	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	2	12	junction_9	12.0819424486849	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	94725165	True	NA	10	True	AATAAA	-19	NA	94726683	95087155	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
WTC11_00089167	chr9	+	268	1	FSM	ENSG00000223849.1	ENST00000433735.1	348	1	73	7	73	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAAGGAGTTGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	95123593	95123861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95123600_95123900
WTC11_00089168	chr9	+	3131	14	FSM	ENSG00000182150.19	ENST00000288985.12	4564	14	-17	1450	0	230	multi-exon	FALSE	canonical	3	33	junction_3	10.2697349343253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGGATATTTCTCTT	95872686	True	NA	NA	False	NA	NA	NA	95875683	95967390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561
WTC11_00089169	chr9	+	3108	2	NNC	ENSG00000182150.19	novel	10245	19	NA	NA	20703	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	23	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACATAGCATTGTTTT	NA	False	NA	18	True	ATTAAA	-15	NA	96014916	96018447	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_96015279_96015701
WTC11_00089170	chr9	+	1028	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	-133	2	-133	0	multi-exon	FALSE	canonical	2	10	junction_1	3.85861230093008	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686871	False	NA	2	True	AATAAA	-14	NA	96686889	96773977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
WTC11_00089172	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	TRUE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96687325_96773459
WTC11_00089173	chr9	+	1100	1	FSM	ENSG00000233820.2	ENST00000602289.1	740	1	-343	-17	-343	17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCTCAAACAGCCTCAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	96726386	96727486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96726400_96727500
WTC11_00089174	chr9	+	500	1	FSM	ENSG00000269907.1	ENST00000602494.1	330	1	-79	-91	-79	91	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTATAGCTCGGTAC	NA	False	NA	NA	False	NA	NA	NA	96909996	96910496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96910000_96910500
WTC11_00089175	chr9	+	1976	1	FSM	ENSG00000213612.3	ENST00000395253.3	831	1	-754	-391	-754	391	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTTCTTACACCCCTT	NA	False	NA	NA	False	NA	NA	NA	97120904	97122880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97120900_97122900
WTC11_00089176	chr9	+	833	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-59	5018	multi-exon	FALSE	canonical	3	186	junction_1	358	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97213865	False	NA	0	True	NA	NA	NA	97214774	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217233_97217364_97219583
WTC11_00089177	chr9	+	2738	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-59	5018	multi-exon	TRUE	non_canonical	0	0	junction_1	451	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97213865	False	NA	0	True	NA	NA	NA	97214774	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97216438_97216652_97217364_97219583
WTC11_00089178	chr9	+	3798	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-59	5018	multi-exon	FALSE	non_canonical	0	0	junction_2	29.5	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAACAGCCATGTT	97213865	False	NA	0	True	NA	NA	NA	97214774	97219947	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97216273_97216438_97216652
WTC11_00089179	chr9	+	1157	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-50	5334	multi-exon	FALSE	canonical	3	186	junction_1	120.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGCATTTTATTAATAA	97213874	False	NA	NA	False	CATAAA	-23	NA	97214783	97220263	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217233_97217381_97219583
WTC11_00089180	chr9	+	1285	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-49	5334	multi-exon	FALSE	canonical	3	156	junction_1	135.5	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGCATTTTATTAATAA	97213875	False	NA	NA	False	CATAAA	-23	NA	97214784	97220263	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217104_97217381_97219583
WTC11_00089182	chr9	+	2377	19	NIC	ENSG00000197816.16	novel	7060	37	NA	NA	129	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	12.4017123469222	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCCTGTCCATCTAC	NA	False	NA	11	True	AATAAA	-17	NA	97330661	97376933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97330768_97343339_97343564_97350408_97350556_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362252_97362362_97362442_97364050_97364129_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
WTC11_00089183	chr9	+	325	2	FSM	ENSG00000136938.9	ENST00000486769.1	400	2	0	75	0	-75	multi-exon	FALSE	canonical	3	907	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGGGCGCAGTGGCACA	97998515	True	NA	83	True	GATAAA	-14	NA	97998613	98005223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97998679_98004963
WTC11_00089185	chr9	+	2734	10	NNC	ENSG00000119514.7	novel	2764	10	NA	NA	-57	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_5	52.4780965478356	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGATCTTTTTGTACTG	98805446	True	NA	16	True	ATTAAA	-19	NA	98807612	98850081	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_98808070_98823255_98823426_98826751_98826942_98831771_98831958_98835248_98835280_98836971_98837149_98840001_98840134_98844095_98844210_98845976_98846124_98848951
WTC11_00089187	chr9	+	5720	8	FSM	ENSG00000106799.13	ENST00000374990.6	5720	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	124.098709888211	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAGTGGCATATTTTAA	99097971	True	NA	-12	True	AATAAA	-16	NA	99105110	99153649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99105303_99128854_99129101_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
WTC11_00089188	chr9	+	5691	9	FSM	ENSG00000119508.18	ENST00000618101.4	5706	9	15	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_2	0.484122918275927	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGTGTATTGAATAAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	99821869	99866891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99822408_99825658_99825833_99826729_99826802_99828040_99828994_99832688_99832819_99833281_99833455_99844648_99844849_99847436_99847616_99863619
WTC11_00089190	chr9	+	2999	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	-31	0	1	0	multi-exon	TRUE	canonical	1	3	junction_3	12.7691778558444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	100098041	True	NA	NA	False	NA	NA	NA	100099243	100300788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
WTC11_00089191	chr9	+	537	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-8	4251	5	-4251	5prime_fragment	FALSE	canonical	3	50	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCATAGGTTTTATATA	100098077	True	NA	NA	False	AATAAA	-16	NA	100099279	100126652	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_100099417_100104497_100104628_100126382
WTC11_00089192	chr9	+	1946	4	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_3	27.2763633939717	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTATTTCTTCTAAT	100351310	True	NA	NA	False	AATAAA	-14	NA	100353082	100393878	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_100353582_100353996_100354096_100390448_100390547_100392628
WTC11_00089193	chr9	+	2260	3	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	36.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTTCTAATCAATATT	100351296	True	NA	NA	False	AATAAA	-21	NA	100353068	100393885	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_100353582_100353996_100354096_100392237
WTC11_00089194	chr9	+	3207	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	-15	0	-15	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	101398161	True	NA	16	True	ATTAAA	-17	NA	101398835	101410654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101399190_101399883_101400011_101407928
WTC11_00089195	chr9	+	7597	11	NIC	ENSG00000106692.15	novel	7897	14	NA	NA	-2904	0	intron_retention	FALSE	canonical	1	3	junction_1	17.0481670569009	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	105570707	True	NA	4	True	AATAAA	-19	NA	105570748	105641118	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_105570898_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619905_105620062_105635050
WTC11_00089197	chr9	+	8221	9	NIC	ENSG00000157654.19	novel	7507	11	NA	NA	-227	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	10.0054672554559	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	109779880	False	NA	14	True	ATTAAA	-28	NA	109779970	110172512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109942685_109943382_110015953_110016040_110136126_110138540_110168398
WTC11_00089198	chr9	+	6814	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	110048554	False	NA	14	True	ATTAAA	-28	NA	110048568	110172512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_110048856_110136126_110138540_110168398
WTC11_00089199	chr9	+	3426	1	ISM	ENSG00000173258.13	ENST00000309235.6	14694	6	26250	563	26213	-563	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGGGTCTACAACTGA	111551410	False	NA	NA	False	NA	NA	NA	111551428	111554854	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_111551400_111554900
WTC11_00089200	chr9	+	284	1	FSM	ENSG00000213529.3	ENST00000448036.1	403	1	7	112	7	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCACAATGTGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	112362720	112363004	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112362700_112363000
WTC11_00089201	chr9	+	3187	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	-28	-176	-28	176	multi-exon	FALSE	canonical	2	13	junction_3	34.0330721504833	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGATTATTGCCCTAAG	112378912	True	NA	NA	False	NA	NA	NA	112380051	112472581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
WTC11_00089204	chr9	+	1074	5	ISM	ENSG00000119411.11	ENST00000374183.5	2328	6	11	2475	10	-2475	5prime_fragment	FALSE	canonical	3	97	junction_3	12.1114615137893	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGCCTGATTTGCCT	113348704	True	NA	NA	False	GATAAA	-36	NA	113349551	113368747	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258
WTC11_00089205	chr9	+	2545	18	FSM	ENSG00000138835.22	ENST00000317613.10	2542	18	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	6.46470320612266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACTTAGAGTGCTGT	113463224	True	NA	NA	False	AAGAAA	-24	NA	113463728	113542089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113541319
WTC11_00089206	chr9	+	3736	16	FSM	ENSG00000138835.22	ENST00000343817.9	3689	16	-56	9	0	0	multi-exon	FALSE	canonical	2	4	junction_12	15.911700796025	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	113501224	True	NA	9	True	AATAAA	-18	NA	113501370	113597729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113501631_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
WTC11_00089207	chr9	+	9289	14	FSM	ENSG00000157657.15	ENST00000615615.4	9289	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.15901004218684	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	113876229	False	NA	9	True	AATAAA	-13	NA	113876281	114056591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
WTC11_00089208	chr9	+	9109	14	FSM	ENSG00000157657.15	ENST00000288466.11	9109	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	5.71823616616794	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	113876229	False	NA	9	True	AATAAA	-13	NA	113876281	114056591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
WTC11_00089209	chr9	+	7879	61	NNC	ENSG00000196739.15	novel	7813	61	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	31.4805760218371	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACGCCTGTGGTCCCGT	114154446	True	NA	26	True	AATAAA	-24	NA	114155454	114312511	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_114156013_114162714_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205813_114206251_114206297_114209674_114209729_114210981_114211019_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231859_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114269240_114269295_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
WTC11_00089211	chr9	+	730	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAATAGCAGCAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	118486799	118487529	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118486800_118487500
WTC11_00089214	chr9	+	3629	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	11	-889	11	-12	multi-exon	FALSE	canonical	2	2	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGTCTGGACACGAT	NA	False	NA	NA	False	AATAAA	-18	NA	120843006	120854373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_120843440_120847293_120847354_120851237
WTC11_00089215	chr9	+	5222	4	NIC	ENSG00000226752.10	novel	1033	5	NA	NA	3	-12	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	12.657891697365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGTCTGGACACGAT	120842158	True	NA	NA	False	AATAAA	-18	NA	120843077	120854373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_120844900_120844992_120845197_120847293_120847354_120851237
WTC11_00089216	chr9	+	5852	4	NIC	ENSG00000226752.10	novel	1033	5	NA	NA	3	-12	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	12.9614813968157	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGTCTGGACACGAT	120842158	True	NA	NA	False	AATAAA	-18	NA	120843077	120854373	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_120844900_120844992_120845827_120847293_120847354_120851237
WTC11_00089217	chr9	+	3814	22	NIC	ENSG00000119397.19	novel	5911	33	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_21	10.8642416224855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTGTTTATTTATT	121121420	True	NA	NA	False	ATTAAA	-15	NA	121121799	121161505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121121952_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161282
WTC11_00089218	chr9	+	5884	33	FSM	ENSG00000119397.19	ENST00000373850.6	5911	33	27	0	11	0	multi-exon	FALSE	canonical	3	14	junction_1	9.81628111863143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	121121440	True	NA	13	True	AATAAA	-14	NA	121121819	121177610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121121952_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
WTC11_00089220	chr9	+	2493	17	NIC	ENSG00000148180.21	novel	2595	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	72.5187206433622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266759	True	NA	15	True	AATAAA	-17	NA	121268170	121332842	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121268220_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
WTC11_00089221	chr9	+	2311	17	FSM	ENSG00000148180.21	ENST00000394353.7	2311	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.738903921023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCCTTCCCTCAAAGA	NA	False	NA	-69	True	NA	NA	NA	121286122	121332646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121286186_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
WTC11_00089222	chr9	+	515	3	FSM	ENSG00000227355.4	ENST00000637541.1	571	3	41	15	-5	-15	multi-exon	FALSE	canonical	1	1	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTCAACTTGATAAAGAA	121370295	True	NA	NA	False	AATAGA	-8	NA	121370531	121378042	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121370824_121375214_121375326_121377930
WTC11_00089223	chr9	+	7075	16	NIC	ENSG00000136848.18	novel	485	4	NA	NA	-240	0	intron_retention	FALSE	canonical	2	6	junction_1	20.911878602045	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	121597935	False	NA	8	True	ATTAAA	-19	NA	121598027	121785528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121598627_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
WTC11_00089224	chr9	+	6740	16	NNC	ENSG00000136848.18	novel	485	4	NA	NA	1235	0	intron_retention	FALSE	canonical	3	14	junction_1	19.5988661803574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	121598829	True	NA	8	True	ATTAAA	-19	NA	121599502	121785528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_121599767_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
WTC11_00089225	chr9	+	6715	16	NNC	ENSG00000136848.18	novel	6784	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	11	junction_1	22.1132438949051	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	121650658	True	NA	10	True	ATTAAA	-21	NA	121651596	121785530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772672_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
WTC11_00089227	chr9	+	1773	10	FSM	ENSG00000095303.17	ENST00000643576.1	1894	10	121	0	121	0	multi-exon	TRUE	canonical	1	2	junction_3	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAGGAAAGCAGCATTC	122371144	False	NA	NA	False	NA	NA	NA	122371205	122392544	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
WTC11_00089230	chr9	+	932	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	-25	7	-25	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGATGTAACCTTGTCC	122939129	False	NA	3	True	AATAAA	-20	NA	122939394	122940326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122939400_122940300
WTC11_00089231	chr9	+	2194	5	FSM	ENSG00000011454.18	ENST00000317419.7	2186	5	-16	8	-16	-8	multi-exon	FALSE	canonical	3	164	junction_1	26.7114207783862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	122934500	True	NA	NA	False	NA	NA	NA	122941003	122990761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296
WTC11_00089232	chr9	+	2131	1	FSM	ENSG00000180264.11	ENST00000622546.1	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124465209	124467340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124465200_124467300
WTC11_00089233	chr9	+	6579	8	FSM	ENSG00000185585.20	ENST00000373580.8	6567	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	7	junction_2	2.65729646253404	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGACTAAATGCTGTGG	124776647	True	NA	NA	False	AATAAA	-27	NA	124777120	124814882	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124777361_124786974_124787239_124795023_124795132_124799284_124799492_124801413_124801664_124804093_124804343_124807780_124807967_124809807
WTC11_00089234	chr9	+	2759	4	NNC	ENSG00000136950.13	novel	2507	6	NA	NA	-976	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.792242140306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGCTTTAAAAGTCTTC	124868151	False	NA	NA	False	AATAAA	-23	NA	124868228	124877733	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_124869439_124873248_124873765_124874974_124875152_124876877
WTC11_00089235	chr9	+	996	4	NNC	ENSG00000136950.13	novel	1325	4	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.792242140306	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTTGGCTTATTAGT	124856115	True	NA	-8	True	NA	NA	NA	124869204	124877390	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_124869440_124873693_124873765_124874974_124875152_124876877
WTC11_00089236	chr9	+	1097	1	FSM	ENSG00000232630.1	ENST00000430496.1	937	1	107	-267	107	267	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACTTTTGAGGATGT	NA	False	NA	NA	False	NA	NA	NA	125150759	125151856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125150800_125151900
WTC11_00089237	chr9	+	9117	27	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	2	28	combination_of_known_junctions	TRUE	canonical	3	38	junction_2	31.7418395607158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGCATTTCTGAAAAC	125258651	True	NA	50	True	NA	NA	NA	125261795	125367235	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
WTC11_00089238	chr9	+	9121	27	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.0090595109606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTTATGTTTCTGTC	125258682	True	NA	17	True	ATTAAA	-22	NA	125261826	125367202	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
WTC11_00089239	chr9	+	9134	28	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	45.0071172545691	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTTATGTTTCTGTC	125258682	True	NA	17	True	ATTAAA	-22	NA	125261826	125367202	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125335171_125335253_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
WTC11_00089242	chr9	+	2755	8	FSM	ENSG00000167081.18	ENST00000342287.9	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	33.5978619339179	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125747330	False	NA	NA	False	AATAAA	-22	NA	125747344	125967377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
WTC11_00089243	chr9	+	282	1	FSM	ENSG00000252985.1	ENST00000517176.1	78	1	12	-216	12	216	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATAAGAACAGCTTATAC	NA	False	NA	NA	False	NA	NA	NA	126426904	126427186	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126426900_126427200
WTC11_00089244	chr9	+	2653	1	ISM	ENSG00000136944.19	ENST00000526117.6	6291	8	84452	0	84452	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTCTCCTTGGTG	NA	False	NA	8	True	AATAAA	-16	NA	126698379	126701032	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_126698400_126701000
WTC11_00089245	chr9	+	6451	20	NIC	ENSG00000136828.19	novel	6330	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_14	20.782877034697	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTCAGTTTATTAAAG	126913086	True	NA	58	True	ATTAAA	-17	NA	126914781	127223166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127196473_127196632_127199014_127199067_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127218739
WTC11_00089246	chr9	+	1757	16	NIC	ENSG00000136828.19	novel	2362	18	NA	NA	121	-123	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	23.769635158234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACCTGGAGGAGGGG	126913276	False	NA	NA	False	NA	NA	NA	126914971	127217221	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
WTC11_00089249	chr9	+	529	6	FSM	ENSG00000136895.19	ENST00000444677.5	667	6	138	0	-17	0	multi-exon	FALSE	canonical	2	9	junction_1	12.7373466624725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGCCCTTTCTTCTTG	127224240	True	NA	NA	False	NA	NA	NA	127224608	127313470	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127224692_127243078_127243250_127264951_127265022_127291167_127291243_127311635_127311736_127313440
WTC11_00089250	chr9	+	820	4	NNC	ENSG00000136895.19	novel	523	5	NA	NA	18	-74066	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.64997911442	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTCACATAGTAGCC	127224960	True	NA	NA	False	AATAAA	-18	NA	127225256	127237610	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_127225404_127232333_127232451_127235793_127235892_127237152
WTC11_00089252	chr9	+	3348	28	FSM	ENSG00000136895.19	ENST00000373387.9	3552	28	178	26	29	-26	multi-exon	FALSE	canonical	2	9	junction_25	26.4967322052796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTCGTTGCTTTTTA	NA	False	NA	98	True	NA	NA	NA	127264951	127393634	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127265022_127291167_127291243_127311635_127311736_127313440_127313560_127318062_127318128_127320714_127320779_127325068_127325096_127332273_127332350_127333022_127333122_127335229_127335334_127336127_127336237_127338115_127338162_127339644_127339752_127342218_127342335_127344234_127344340_127345402_127345478_127348923_127349036_127353845_127353945_127354293_127354411_127355296_127355473_127357218_127357378_127365299_127365367_127383437_127383546_127385026_127385146_127387192_127387332_127388903_127389120_127390640_127390768_127393082
WTC11_00089256	chr9	+	1705	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	72.4084551347424	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGACTGACACAGAAAA	127394557	True	NA	6	True	NA	NA	NA	127397148	127407645	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
WTC11_00089257	chr9	+	1666	10	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	9	-108	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	82.8431509198014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTTCTGGCTGGAG	127394624	True	NA	-95	True	ACTAAA	-30	NA	127397215	127407544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403737_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
WTC11_00089258	chr9	+	3140	5	ISM	ENSG00000136856.18	ENST00000439597.5	854	7	1783	-2069	2	-108	intron_retention	FALSE	canonical	3	12	junction_2	108.97132650381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTTCTGGCTGGAG	127399955	True	NA	-95	True	ACTAAA	-30	NA	127399965	127407544	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_127400007_127402556_127402754_127403737_127403804_127403958_127404068_127404817
WTC11_00089259	chr9	+	3465	25	FSM	ENSG00000148356.15	ENST00000674970.1	3465	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	39.9483824940246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCAGTGCGCTTCTGG	127450053	False	NA	6	True	AATAAA	-3	NA	127451682	127503486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127460900_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00089261	chr9	+	2767	19	ISM	ENSG00000148356.15	ENST00000373322.1	2849	25	8602	0	-89	0	3prime_fragment	FALSE	canonical	3	149	junction_14	18.8214482328074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127460832	False	NA	19	True	AATAAA	-16	NA	127460856	127503499	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00089263	chr9	+	2597	1	FSM	ENSG00000136854.24	ENST00000628768.1	2582	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTCTGGCTTTCCTT	127690091	False	NA	23	True	AATAAA	-36	NA	127690118	127692715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127690100_127692700
WTC11_00089264	chr9	+	1002	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCATCTTTTCATTTT	127792036	False	NA	24	True	AATACA	-14	NA	127792046	127793048	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_127792000_127793000
WTC11_00089265	chr9	+	1226	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCGTCTTACTCTGTCA	127794866	False	NA	4	True	AATAAA	-17	NA	127794876	127796102	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_127794900_127796100
WTC11_00089269	chr9	+	3780	20	NIC	ENSG00000106976.21	novel	4734	22	NA	NA	-39	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	136.263615294713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCTGCTGGTTGTGTT	128198150	True	NA	25	True	AATAAA	-26	NA	128203339	128255246	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
WTC11_00089270	chr9	+	7356	23	NNC	ENSG00000106976.21	novel	3254	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	129.799026152289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	128198227	True	NA	23	True	AATAAA	-24	NA	128203416	128255244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128230495_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
WTC11_00089271	chr9	+	7247	22	NNC	ENSG00000106976.21	novel	3254	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	132.499415991525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	128198227	True	NA	23	True	AATAAA	-24	NA	128203416	128255244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128230495_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254008
WTC11_00089274	chr9	+	325	1	FSM	ENSG00000272696.1	ENST00000609315.1	573	1	141	107	141	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCCATGGGACCCAGAA	NA	False	NA	NA	False	NA	NA	NA	128316477	128316802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128316500_128316800
WTC11_00089275	chr9	+	1055	5	NIC	ENSG00000167113.11	novel	1245	7	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.9252312292095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGTCTGCTTGTCCTC	128322700	False	NA	8	True	AATAAA	-14	NA	128322797	128334068	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128322929_128323015_128323148_128325778_128325882_128332849_128332944_128333473
WTC11_00089276	chr9	+	3127	2	FSM	ENSG00000167113.11	ENST00000461102.1	3127	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGTCTGCTTGTCCTC	128330386	False	NA	8	True	AATAAA	-14	NA	128330411	128334068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128332944_128333473
WTC11_00089278	chr9	+	1176	5	FSM	ENSG00000167123.20	ENST00000411852.5	1176	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.1464281994822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATGGGGCAGGGGCT	128420455	False	NA	NA	False	NA	NA	NA	128420480	128424182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128421075_128421203_128421512_128422867_128422979_128423145_128423264_128424137
WTC11_00089280	chr9	+	2337	17	ISM	ENSG00000136811.17	ENST00000372807.10	2780	21	-35	5486	-6	0	5prime_fragment	FALSE	canonical	3	70	junction_4	16.87407404867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	128454225	True	NA	11	True	AATAAA	-20	NA	128456122	128494839	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
WTC11_00089281	chr9	+	3656	22	NIC	ENSG00000136811.17	novel	3030	21	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.0497614187048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTAAGGCTCCATTT	128454254	True	NA	21	True	AAAAAG	-12	NA	128456151	128500955	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00089282	chr9	+	3249	20	NIC	ENSG00000136811.17	novel	3862	21	NA	NA	2	-16	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	25.433635329897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAATCAGTTATTTA	128454256	True	NA	10	True	AAAAAG	-1	NA	128456153	128500944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00089283	chr9	+	3357	21	FSM	ENSG00000136811.17	ENST00000351030.8	3862	21	157	348	-4	-16	multi-exon	FALSE	canonical	3	12	junction_2	25.3306138891263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAATCAGTTATTTA	128454265	True	NA	10	True	AAAAAG	-1	NA	128456162	128500944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460549_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00089284	chr9	+	3329	21	NIC	ENSG00000136811.17	novel	3791	21	NA	NA	4	-16	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	21.9342198402405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAATCAGTTATTTA	128454273	True	NA	10	True	AAAAAG	-1	NA	128456170	128500944	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00089285	chr9	+	3207	20	NIC	ENSG00000136811.17	novel	3387	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	29.1219615180585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454257	True	NA	26	True	AAAAAG	-17	NA	128456154	128500960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128459566_128459658_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
WTC11_00089286	chr9	+	2218	14	FSM	ENSG00000119392.16	ENST00000372770.4	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.7858069096921	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCTGTCTTAAATAT	128502630	True	NA	NA	False	AATAAA	-17	NA	128504730	128539877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615
WTC11_00089287	chr9	+	7768	54	NIC	ENSG00000197694.18	novel	7794	55	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	148.572955494288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128543276	True	NA	17	True	AATAAA	-18	NA	128552600	128633662	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
WTC11_00089291	chr9	+	357	2	FSM	ENSG00000119335.18	ENST00000485056.1	483	2	126	0	126	0	multi-exon	FALSE	canonical	3	6311	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCATCTTCGAAGTCCA	128692080	False	NA	NA	False	AATAAA	-36	NA	128692476	128692935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128692766_128692867
WTC11_00089292	chr9	+	555	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	-1	5	-1	-5	multi-exon	FALSE	canonical	3	53	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723659	True	NA	8	True	AATAAA	-20	NA	128724433	128733194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128724636_128732841
WTC11_00089293	chr9	+	731	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	5.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723668	True	NA	8	True	AATAAA	-20	NA	128724442	128733194	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128724636_128730063_128730249_128732841
WTC11_00089294	chr9	+	1620	13	FSM	ENSG00000175287.19	ENST00000372592.8	2047	13	427	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	28.4848887814028	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	128921365	True	NA	11	True	AATAAA	-18	NA	128921408	128942038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
WTC11_00089295	chr9	+	1598	12	FSM	ENSG00000175287.19	ENST00000308941.9	1599	12	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	31.3236899761029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	128921365	True	NA	11	True	AATAAA	-18	NA	128921408	128942038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940368_128940498_128940598_128940716_128941444_128941572_128941667
WTC11_00089296	chr9	+	4146	16	NNC	ENSG00000148343.19	novel	4345	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.3325757477928	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	129034199	True	NA	6	True	AATAAA	-12	NA	129036636	129072071	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_129036682_129040451_129040691_129042303_129042430_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
WTC11_00089297	chr9	+	2516	9	FSM	ENSG00000119383.21	ENST00000355007.7	2515	9	-1	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	245.65868089689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100405	True	NA	25	True	ATTAAA	-22	NA	129111412	129148946	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
WTC11_00089299	chr9	+	416	1	FSM	ENSG00000268707.1	ENST00000600965.1	507	1	87	4	87	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCTAGTAATAACCATT	NA	False	NA	NA	False	AATAAA	-16	NA	129170520	129170936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129170500_129170900
WTC11_00089300	chr9	+	627	3	NNC	ENSG00000204055.5	novel	1324	3	NA	NA	7299	28	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTATCATGGCAGAAACC	129208394	True	NA	31	True	AATAAA	-41	NA	129208613	129214094	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_129208705_129208868_129209237_129213926
WTC11_00089301	chr9	+	616	3	NNC	ENSG00000204055.5	novel	1324	3	NA	NA	7377	91	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	10.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGAGGATTAAATGAGA	129208472	False	NA	94	True	NA	NA	NA	129208691	129214157	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_129208705_129208868_129209237_129213922
WTC11_00089302	chr9	+	779	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	5	1445	5	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	129336439	True	NA	9	True	ATTAAA	-14	NA	129336880	129347462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
WTC11_00089303	chr9	+	430	3	FSM	ENSG00000233901.7	ENST00000667257.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	129336480	True	NA	9	True	ATTAAA	-14	NA	129336921	129347462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129336989_129338791_129338918_129347225
WTC11_00089304	chr9	+	4371	26	NIC	ENSG00000136878.14	novel	4293	26	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	2	13	junction_25	25.8737241231331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCCACGGCCACACAG	129833962	True	NA	4	True	AATAAA	-11	NA	129835462	129881823	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880378
WTC11_00089305	chr9	+	4371	26	FSM	ENSG00000136878.14	ENST00000358355.5	4371	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.6641695754996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833977	True	NA	9	True	AATAAA	-16	NA	129835477	129881828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835598_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
WTC11_00089306	chr9	+	5539	30	NIC	ENSG00000148357.18	novel	15789	98	NA	NA	-5137	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	5.97497754959737	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTTTCTTTGTCTAA	NA	False	NA	6	True	TATAAA	-18	NA	130393504	130434121	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_130394009_130394384_130394576_130395026_130395109_130395210_130395348_130395923_130396066_130396168_130396314_130397527_130397656_130398550_130398708_130399510_130399633_130400782_130400948_130402788_130402897_130403193_130403329_130403740_130403876_130404868_130405060_130405954_130406169_130407570_130407706_130408742_130408934_130410570_130410653_130418771_130419042_130422576_130422727_130424775_130424914_130425008_130425131_130425686_130425925_130427312_130427376_130427496_130427620_130429556_130429686_130430283_130430605_130431366_130431487_130432428_130432556_130433347
WTC11_00089307	chr9	+	2766	3	FSM	ENSG00000130713.17	ENST00000467138.1	2766	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	130700821	False	NA	11	True	GATAAA	-27	NA	130700841	130704861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130702311_130703052_130703182_130703693
WTC11_00089308	chr9	+	5267	29	NNC	ENSG00000050555.19	novel	7455	28	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	42.7814062939707	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGTGAGGGTGCATGT	131005792	True	NA	15	True	CATAAA	-27	NA	131009129	131092058	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131052490_131052684_131052849_131052966_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131077898_131078082_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
WTC11_00089309	chr9	+	3515	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	571.699415971559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGGTGTATTTTGGGG	131079075	True	NA	34	True	AATAAA	-22	NA	131096475	131123152	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
WTC11_00089310	chr9	+	3305	6	FSM	ENSG00000126878.13	ENST00000372300.5	3284	6	-21	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	473.676514089521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079129	True	NA	27	True	AATAAA	-15	NA	131096529	131123145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117848_131120234
WTC11_00089311	chr9	+	6296	36	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	11	-1	intron_retention	FALSE	canonical	2	3	junction_11	40.5479408873506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAACGTATGTGGGTTT	131117739	True	NA	22	True	ATTAAA	-14	NA	131125606	131233700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144567_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00089312	chr9	+	6424	34	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	24	-1	intron_retention	FALSE	canonical	3	21	junction_26	39.5563783820899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAACGTATGTGGGTTT	131117752	True	NA	22	True	ATTAAA	-14	NA	131125619	131233700	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00089313	chr9	+	6577	36	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	2	0	intron_retention	FALSE	canonical	3	19	junction_12	37.9263087837346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTGGGTTTTTTCAGA	131117720	True	NA	29	True	ATTAAA	-21	NA	131125587	131233707	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146161_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
WTC11_00089314	chr9	+	3208	13	FSM	ENSG00000126883.18	ENST00000453861.6	3208	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	73.9719823086192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACGTATGTGGGTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	131187311	131233701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131229662_131229826_131230629_131230770_131232283_131232309_131233453
WTC11_00089316	chr9	+	7324	30	NIC	ENSG00000288701.1	novel	9157	31	NA	NA	-95	-1857	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	72.9719213668292	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGAATTAATTCTGTG	131393687	False	NA	22	True	AGTAAA	-26	NA	131393957	131498314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00089317	chr9	+	11265	32	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	72.499151381879	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGCTGAACGTGCTT	131382772	True	NA	11	True	AATAAA	-13	NA	131394052	131500190	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00089318	chr9	+	7082	30	NIC	ENSG00000288701.1	novel	9157	31	NA	NA	25	-1942	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	75.6374888961555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAGAATTTATTTATATG	131382837	True	NA	4	True	AATAAA	-12	NA	131394117	131498229	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00089319	chr9	+	7664	31	NIC	ENSG00000288701.1	novel	9157	31	NA	NA	25	-1439	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	71.1029300849597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTCACTTTTGCCTGT	131382837	True	NA	NA	False	NA	NA	NA	131394117	131498732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
WTC11_00089320	chr9	+	9190	31	NIC	ENSG00000288701.1	novel	11238	32	NA	NA	77	-1857	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	74.271274542869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGAATTAATTCTGTG	131382889	True	NA	22	True	AGTAAA	-26	NA	131394169	131498314	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00089321	chr9	+	9327	30	NNC	ENSG00000288701.1	novel	11253	32	NA	NA	-16644	-1859	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	81.0032221434547	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGAATTAATTCTG	NA	False	NA	20	True	AGTAAA	-24	NA	131429860	131498312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464765_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00089322	chr9	+	4723	18	FSM	ENSG00000130714.19	ENST00000684579.1	4705	18	-18	0	-2	0	multi-exon	TRUE	canonical	2	10	junction_8	37.3977036099025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAACTGGCGTTTGTAG	131501409	True	NA	2	True	ATTAAA	-5	NA	131502903	131523787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00089323	chr9	+	3137	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	115	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_8	36.9109882369949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501409	True	NA	14	True	ATTAAA	-17	NA	131502903	131523799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00089325	chr9	+	2888	8	FSM	ENSG00000196358.12	ENST00000393229.4	4673	8	97	1688	97	665	multi-exon	FALSE	canonical	1	2	junction_1	2.64189171555813	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTTCTTTCTGTGT	132162123	False	NA	15	True	AGTAAA	-25	NA	132162154	132242838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132162240_132166348_132167045_132197965_132198610_132226848_132227022_132230571_132230596_132239103_132239272_132240909_132241045_132241875
WTC11_00089326	chr9	+	1737	6	FSM	ENSG00000188523.9	ENST00000393216.3	1725	6	-12	0	-12	0	multi-exon	FALSE	canonical	1	5	junction_4	3.9496835316263	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCTCCATTTGAA	132409938	True	NA	18	True	ATTAAA	-20	NA	132410198	132573319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132410467_132498694_132498795_132499371_132499601_132537600_132537707_132542945_132543048_132572387
WTC11_00089327	chr9	+	2221	4	FSM	ENSG00000165698.16	ENST00000372136.7	2536	4	314	1	314	0	multi-exon	FALSE	canonical	0	0	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	132878229	True	NA	4	True	AATAAA	-16	NA	132878340	132890030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289
WTC11_00089328	chr9	+	643	5	FSM	ENSG00000165698.16	ENST00000350499.6	894	5	80	171	80	0	multi-exon	FALSE	canonical	2	3	junction_3	2.27760839478607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	132878936	False	NA	4	True	AATAAA	-16	NA	132878977	132890030	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289_132888438_132889956
WTC11_00089330	chr9	+	1074	5	FSM	ENSG00000160323.19	ENST00000371910.1	1074	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	13.7181449183189	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	NA	False	NA	13	True	AATAAA	-18	NA	133455647	133459386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133455800_133456068_133456216_133456542_133456720_133457909_133458095_133458973
WTC11_00089332	chr9	+	8442	66	FSM	ENSG00000130635.16	ENST00000371817.8	8442	66	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	12.8015901379153	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGAGTGACTCTCTT	134641163	True	NA	11	True	AATAAA	-26	NA	134641802	134844843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134642297_134690911_134691080_134699908_134700123_134701170_134701334_134727265_134727398_134728669_134728808_134730235_134730476_134731495_134731664_134732070_134732128_134738473_134738516_134738745_134738809_134750541_134750617_134750789_134750883_134752588_134752646_134753849_134753904_134754272_134754327_134756764_134756819_134758242_134758297_134761924_134761979_134763692_134763738_134765680_134765735_134766453_134766499_134766999_134767054_134767309_134767355_134768409_134768464_134772789_134772835_134774858_134774913_134780101_134780147_134782666_134782721_134784988_134785097_134785994_134786049_134789154_134789209_134795081_134795127_134795261_134795316_134796373_134796419_134796847_134796902_134798407_134798462_134801953_134802008_134802887_134802996_134804974_134805065_134805160_134805215_134806188_134806297_134809182_134809291_134810254_134810309_134811338_134811393_134811491_134811600_134812448_134812503_134812604_134812713_134813982_134814037_134814796_134814905_134815575_134815630_134815934_134815989_134817025_134817080_134817777_134817832_134818655_134818764_134818847_134818902_134818999_134819054_134820115_134820224_134822096_134822151_134822997_134823034_134823415_134823470_134824599_134824856_134825791_134825905_134829975_134830045_134834970_134835205_134842156
WTC11_00089333	chr9	+	4640	3	FSM	ENSG00000196422.11	ENST00000604351.5	4640	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTTCTTTTTAAATC	135478934	True	NA	17	True	AATAAA	-17	NA	135479662	135488893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135479725_135483949_135484083_135484448
WTC11_00089334	chr9	+	5250	3	ISM	ENSG00000196422.11	ENST00000356818.7	4951	4	55	12	55	-12	intron_retention	FALSE	canonical	3	79	junction_1	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATGGCGTTACTG	135479299	False	NA	4	True	AATAAA	-4	NA	135479836	135488880	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_135480023_135482682_135482816_135483949
WTC11_00089335	chr9	+	5147	5	NNC	ENSG00000196422.11	novel	4769	3	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	40.1084467413038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479772	False	NA	16	True	AATAAA	-16	NA	135480030	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_135480266_135482682_135482816_135483351_135483554_135483949_135484083_135484448
WTC11_00089336	chr9	+	6143	3	ISM	ENSG00000196422.11	ENST00000356818.7	4951	4	1468	0	-1432	0	3prime_fragment	FALSE	canonical	3	114	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135480991	False	NA	16	True	AATAAA	-16	NA	135481249	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_135482816_135483949_135484083_135484448
WTC11_00089337	chr9	+	6153	3	NNC	ENSG00000196422.11	novel	4951	4	NA	NA	-1432	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	49.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135480991	False	NA	16	True	AATAAA	-16	NA	135481249	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_135482826_135483949_135484083_135484448
WTC11_00089338	chr9	+	1925	3	FSM	ENSG00000122140.11	ENST00000453385.1	810	3	-416	-699	-185	36	multi-exon	FALSE	canonical	3	587	junction_1	43.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCCATGTGGTGTGGTT	NA	False	NA	52	True	GGGGCT	-21	NA	135500496	135504709	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135501124_135501843_135501974_135503541
WTC11_00089339	chr9	+	831	5	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-60	-149	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	6.41774882649672	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGGTTGGGCATTTTTC	136545444	True	NA	6	True	TATAAA	-17	NA	136546151	136549744	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136546372_136547841_136548102_136548743_136548809_136549131_136549219_136549545
WTC11_00089340	chr9	+	738	3	FSM	ENSG00000237886.1	ENST00000429224.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	3	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGCAGCTGTGGGAAC	136545504	True	NA	NA	False	NA	NA	NA	136546211	136549449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136546372_136547841_136548102_136549131
WTC11_00089341	chr9	+	2925	5	NNC	ENSG00000237886.1	novel	738	3	NA	NA	0	2583	intron_retention	FALSE	canonical	2	4	junction_3	10.8483869768736	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATCATCACGATCAGCA	136545504	True	NA	-52	True	NA	NA	NA	136546211	136552476	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136548102_136548743_136548809_136549131_136549219_136551020_136551198_136551770
WTC11_00089342	chr9	+	4400	5	NNC	ENSG00000237886.1	novel	738	3	NA	NA	0	2583	intron_retention	FALSE	canonical	2	8	junction_4	8.87059749960509	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATCATCACGATCAGCA	136545504	True	NA	-52	True	NA	NA	NA	136546211	136552476	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136548102_136548743_136548809_136549131_136549219_136549545_136551198_136551770
WTC11_00089343	chr9	+	1595	5	NNC	ENSG00000165716.11	novel	2358	5	NA	NA	13	-13	intron_retention	FALSE	canonical	3	39	junction_2	203.209251757886	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGGGCTGAGCACCCT	136710821	True	NA	24	True	AATAAA	-15	NA	136712584	136724037	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136712729_136717576_136717712_136721965_136722029_136722124_136722302_136722961
WTC11_00089344	chr9	+	4955	22	Fusion	ENSG00000196642.19_ENSG00000213213.14	novel	3104	15	NA	NA	-9	0	intron_retention	TRUE	canonical	0	0	junction_2	237.077137575511	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGTGTGTCTGTTCTT	136800201	True	NA	9	True	CATAAA	-15	NA	136800305	136841182	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_+_136800494_136802663_136802787_136804501_136804628_136804761_136804817_136805356_136805458_136806077_136806868_136806969_136807067_136807571_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
WTC11_00089345	chr9	+	981	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	-354	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136819383	True	NA	4	True	ATTAAA	-13	NA	136849424	136851022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136850138_136850754
WTC11_00089346	chr9	+	2435	18	ISM	ENSG00000177943.14	ENST00000445819.5	3895	29	3192	0	0	0	3prime_fragment	FALSE	canonical	2	8	junction_3	7.2660751269764	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCCAGGGTGAAGTCA	136855402	False	NA	14	True	AATAAA	-25	NA	136855558	136860797	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_136855620_136855731_136855849_136856017_136856150_136856256_136856382_136856463_136856576_136856709_136856827_136856906_136857042_136857164_136857299_136857366_136857587_136857658_136857797_136857978_136858098_136858185_136858277_136858399_136858547_136858718_136858854_136859004_136859133_136859208_136859318_136859885_136860065_136860561
WTC11_00089348	chr9	+	2515	13	NIC	ENSG00000127191.18	novel	2266	11	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	123.32373273444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882791	True	NA	12	True	ATTAAA	-14	NA	136886527	136926607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136886542_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
WTC11_00089349	chr9	+	6792	11	NNC	ENSG00000127191.18	novel	380	3	NA	NA	4513	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	88.5442827064515	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136894034	False	NA	12	True	ATTAAA	-14	NA	136894047	136926607	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136898600_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
WTC11_00089350	chr9	+	4350	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGGCGGATCACTTCA	NA	False	NA	NA	False	NA	NA	NA	136930709	136935059	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_136930700_136935100
WTC11_00089351	chr9	+	1419	1	FSM	ENSG00000213590.2	ENST00000395082.2	1322	1	-393	296	-393	-296	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTACTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	136935446	136936865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136935400_136936900
WTC11_00089352	chr9	+	421	2	FSM	ENSG00000107317.13	ENST00000460340.1	616	2	48	147	48	-147	multi-exon	FALSE	canonical	2	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGCTGCCCCACCAGC	136978816	True	NA	NA	False	NA	NA	NA	136978890	136979401	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136979133_136979222
WTC11_00089353	chr9	+	743	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	65	-54	34	4	multi-exon	FALSE	canonical	2	18	junction_3	4.58693797647189	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGGCTGTCTGCGC	136978802	True	NA	14	True	AATAAA	-24	NA	136978876	136981746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
WTC11_00089355	chr9	+	744	5	FSM	ENSG00000148362.11	ENST00000467845.5	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	81.3153583279321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGGTGGGGCTCTGA	136992600	False	NA	22	True	AATAAA	-17	NA	136992639	136993975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00089356	chr9	+	2704	13	FSM	ENSG00000177239.16	ENST00000682117.1	2690	13	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.4137873809723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTCGCCTGTGTCTTT	137086872	False	NA	10	True	GATAAA	-19	NA	137086950	137109185	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108426
WTC11_00089357	chr9	+	4848	13	ISM	ENSG00000188566.15	ENST00000684003.1	4817	14	52	0	2	0	intron_retention	FALSE	canonical	3	102	junction_9	14.0146252972465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137200441	True	NA	6	True	AATAAA	-15	NA	137205751	137219361	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093
WTC11_00089358	chr9	+	1614	14	FSM	ENSG00000188747.9	ENST00000683555.1	1614	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	5.70891548162445	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	137423131	True	NA	7	True	AATAAA	-17	NA	137423392	137434406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
WTC11_00089359	chr9	+	1626	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	1	2	1	-1	intron_retention	FALSE	canonical	3	226	junction_4	39.8315899200064	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCCTCACCGGCCT	137601031	True	NA	10	True	AATAAA	-15	NA	137605686	137615358	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
WTC11_00089360	chr9	+	2680	16	FSM	ENSG00000181090.21	ENST00000371394.6	2679	16	-1	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	176.190502960101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCATATATGGTCACT	137604813	True	NA	NA	False	AATAAA	-21	NA	137618991	137792256	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137619050_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137792054
WTC11_00089361	chr9	+	4983	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	113.710467416153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTTTAAATGGGGTT	137604826	True	NA	2	True	AATAAA	-7	NA	137619004	137836114	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00089362	chr9	+	4665	27	NNC	ENSG00000181090.21	novel	5095	27	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	119.978227807919	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	137604846	True	NA	7	True	AATAAA	-18	NA	137619024	137835741	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743394_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00089363	chr9	+	2628	5	FSM	ENSG00000181090.21	ENST00000494249.5	2038	5	-217	-373	-217	0	multi-exon	FALSE	canonical	3	540	junction_3	24.0935676063135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTTTAAATGGGGTT	137815101	False	NA	2	True	AATAAA	-7	NA	137815118	137836114	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00089365	chr9	+	9325	44	NIC	ENSG00000148408.14	novel	9792	47	NA	NA	0	-236	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.8937540715664	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGGTTTGTTGCAAAA	137876177	True	NA	NA	False	NA	NA	NA	137877781	138124383	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137878218_137879053_137879160_137882743_137882884_137913179_137913272_137914653_137914807_137917240_137917432_137952273_137952378_137955697_137955814_137956770_137956828_137957597_137957688_137971382_137971593_137975906_137976020_137984137_137984251_137986412_137986545_137986781_137986855_138006766_138006885_138010009_138010078_138013128_138013236_138023010_138023812_138024954_138025173_138043773_138043901_138046903_138047034_138047398_138047459_138049208_138049316_138052091_138052189_138053845_138054007_138057731_138057870_138058048_138058251_138058568_138058734_138059078_138059190_138059653_138059738_138073487_138073605_138074000_138074067_138075818_138075911_138078113_138078259_138105698_138105808_138112397_138112506_138114377_138114491_138115551_138115680_138117945_138118082_138118651_138118769_138120164_138120373_138120630_138120882_138121468
WTC11_00089366	chr9	+	9754	46	FSM	ENSG00000148408.14	ENST00000371363.5	9758	46	0	4	0	1	multi-exon	FALSE	canonical	0	0	junction_1	11.7079692180103	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATGCTGCCATTGGT	137876210	True	NA	NA	False	AATAAA	-28	NA	137877814	138124620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137878218_137879053_137879160_137882743_137882884_137913179_137913272_137914653_137914807_137917240_137917432_137952273_137952378_137955697_137955814_137956770_137956828_137957597_137957688_137971382_137971593_137975906_137976020_137984137_137984251_137986412_137986545_137986781_137986855_138006766_138006885_138010009_138010078_138013128_138013236_138023010_138023812_138024954_138025173_138043773_138043901_138046903_138047034_138047398_138047459_138049208_138049316_138052091_138052189_138053845_138054007_138057731_138057870_138058048_138058251_138058568_138058734_138059078_138059190_138059653_138059738_138073487_138073605_138074000_138074067_138075818_138075911_138078113_138078259_138096483_138096612_138102710_138102808_138105698_138105808_138112397_138112506_138114377_138114491_138115551_138115680_138117945_138118082_138118651_138118769_138120164_138120373_138120630_138120882_138121468
WTC11_00089367	chr9	+	2362	5	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	33.7860918130523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150030	False	NA	25	True	AATAAA	-15	NA	138150086	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_138150309_138174369_138174873_138175362_138175472_138175600_138175902_138176206
WTC11_00089368	chr9	+	1618	4	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	21.2759645296439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149483	True	NA	25	True	AATAAA	-15	NA	138150137	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_138150309_138175362_138175472_138175600_138175712_138176206
WTC11_00089369	chr9	+	3039	3	ISM	ENSG00000159247.13	ENST00000503395.5	1735	5	55	-925	55	0	intron_retention	FALSE	canonical	3	57	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149513	True	NA	25	True	AATAAA	-15	NA	138150167	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_138150309_138174045_138174873_138175362
WTC11_00089370	chr9	+	2297	2	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGGTCTCAAAAAAAAAAAA	138278974	False	NA	NA	False	NA	NA	NA	138278984	138281379	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_138279066_138279163
WTC11_00089371	chr9	+	1083	1	FSM	ENSG00000250210.5	ENST00000523795.4	183	1	3	-903	3	903	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCATGCATTGCATTT	138286240	False	NA	NA	False	AATAAA	-31	NA	138286250	138287333	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_138286200_138287300
WTC11_00089372	chr9	-	1682	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	4732	-39	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_3	80.5122488955701	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGCTTTTAATAAAG	NA	False	NA	-2	True	AATAAA	-18	NA	25007	14513	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16062_16717_16877_16968_17167_17343_17480_17718_17856_18027_18175_18380_18480_24850
WTC11_00089378	chr9	-	1035	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-229	0	-229	0	multi-exon	FALSE	canonical	3	57	junction_3	15.7480157480236	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621618	False	NA	0	True	AATAAA	-25	NA	2621650	2535651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
WTC11_00089379	chr9	-	658	3	NIC	ENSG00000236404.12	novel	806	4	NA	NA	-14	-8	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	43.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAAATGCCTGATTTCC	-2621175	True	NA	-8	True	AATAAA	-17	NA	2621435	2535659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_2536016_2536358_2536454_2621228
WTC11_00089380	chr9	-	456	2	FSM	ENSG00000080608.10	ENST00000469168.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAACATGCATTCGTG	-2829896	False	60	NA	False	TATAAA	-4	NA	2829925	2828474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2828779_2829773
WTC11_00089381	chr9	-	9258	17	FSM	ENSG00000080298.16	ENST00000617270.5	9258	17	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_16	4.11504480534538	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	-3525975	False	NA	NA	False	AATAAA	-22	NA	3526001	3218296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471_3395597_3525746
WTC11_00089382	chr9	-	254	2	NNC	ENSG00000273061.2	novel	256	2	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-4679228	False	NA	-10	True	AATAAA	-15	NA	4679412	4676599	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4676750_4679308
WTC11_00089383	chr9	-	841	2	FSM	ENSG00000107014.9	ENST00000381627.4	928	2	87	0	87	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTGTCTTTTTATTA	NA	False	NA	0	True	ATTAAA	-23	NA	5304629	5299863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5300445_5304369
WTC11_00089384	chr9	-	835	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	6	5	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	144.710918731103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCTGCTCTCATTTC	-5435023	True	NA	3	True	AATAAA	-25	NA	5437861	5357965	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
WTC11_00089385	chr9	-	3186	23	FSM	ENSG00000178445.10	ENST00000639954.1	3279	23	99	-6	99	0	multi-exon	FALSE	canonical	0	0	junction_4	336.893762223039	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAGTATTCTAATAAA	-6628999	False	NA	-37	True	NA	NA	NA	6644692	6532502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6644613
WTC11_00089388	chr9	-	682	3	NNC	ENSG00000137038.8	novel	458	3	NA	NA	-33	54093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAAGGGTTTTTTTTTTT	-7788921	True	NA	NA	False	CATAAA	-35	NA	7799811	7742406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742432_7798343_7798638_7799448
WTC11_00089389	chr9	-	1013	3	NNC	ENSG00000137038.8	novel	458	3	NA	NA	-33	54093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAAGGGTTTTTTTTTTT	-7788921	True	NA	NA	False	CATAAA	-35	NA	7799811	7742406	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742432_7798343_7798638_7799117
WTC11_00089390	chr9	-	2466	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	-10	0	10	multi-exon	FALSE	canonical	3	1018	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGGTTCTTTCCAT	-7788888	True	NA	NA	False	AATAAA	-30	NA	7799778	7796489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7798638_7799460
WTC11_00089391	chr9	-	9840	33	NIC	ENSG00000153707.19	novel	10389	46	NA	NA	-267	0	intron_retention	FALSE	canonical	0	0	junction_32	12.8402139292926	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCTTTGCTTTTGT	-8858005	False	NA	-30	True	AATAAA	-18	NA	8858043	8314245	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485328_8485761_8486350_8492861_8492980_8497241_8497269_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
WTC11_00089393	chr9	-	7350	45	NNC	ENSG00000107186.17	novel	7821	47	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_44	31.0030240460507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-13276715	False	2643	-12	True	AATAAA	-25	NA	13279358	13105706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279326
WTC11_00089394	chr9	-	7531	45	NIC	ENSG00000107186.17	novel	7821	47	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_20	28.0286158378384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-13276969	True	NA	-12	True	AATAAA	-25	NA	13279612	13105706	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
WTC11_00089395	chr9	-	3129	10	FSM	ENSG00000147862.18	ENST00000397579.6	3129	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.5734219812218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAATGAAAAAAA	-14314498	False	NA	NA	False	NA	NA	NA	14314582	14087602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14088327_14102421_14102511_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
WTC11_00089398	chr9	-	701	3	FSM	ENSG00000164946.20	ENST00000497634.2	701	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATCTTATAACAT	NA	False	NA	NA	False	NA	NA	NA	14792884	14784271	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14784635_14788918_14789115_14792742
WTC11_00089399	chr9	-	998	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGATGTCATATCA	NA	False	NA	NA	False	AAAAAG	-15	NA	14922334	14921336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14921300_14922300
WTC11_00089401	chr9	-	818	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	7	-56534	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATGAAAGACTGCAGA	-15307057	False	NA	-59	True	AATAAA	-10	NA	15307202	15305575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_15306275_15307083
WTC11_00089403	chr9	-	306	2	FSM	ENSG00000164985.15	ENST00000481862.1	306	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACATACTAAGGTCGGC	-15472589	False	NA	NA	False	NA	NA	NA	15472750	15470989	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15471177_15472631
WTC11_00089405	chr9	-	813	5	NIC	ENSG00000173068.18	novel	662	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.9666295470958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	-16870642	False	926	NA	False	AATAAA	-19	NA	16870670	16579790	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_16580149_16582982_16583086_16727796_16727998_16738359_16738486_16870645
WTC11_00089406	chr9	-	715	4	Fusion	ENSG00000137154.13_ENSG00000232176.1	novel	892	2	NA	NA	577	-26	multi-exon	TRUE	canonical	3	9508	junction_1	8970.97464047246	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTCTAAGTGAGTAAAAA	-19112756	False	NA	NA	False	NA	NA	NA	19379621	19200360	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_19200583_19378367_19378515_19378707_19378919_19379486
WTC11_00089407	chr9	-	560	1	FSM	ENSG00000272842.1	ENST00000609609.1	560	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTCTCTCATCTTTTG	-19105080	False	NA	NA	False	AATAAA	-14	NA	19371945	19371385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19371400_19371900
WTC11_00089409	chr9	-	826	6	NNC	ENSG00000137154.13	novel	1369	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	208	junction_3	10618.9298255521	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	-19113371	True	NA	-22	True	AATAAA	-17	NA	19380236	19376254	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19376389_19376493_19376652_19378367_19378512_19378707_19378919_19379486_19379619_19380189
WTC11_00089411	chr9	-	359	1	FSM	ENSG00000231909.7	ENST00000417653.2	379	1	-65	85	-65	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAGAGTGAGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	19461369	19461010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19461000_19461400
WTC11_00089412	chr9	-	11006	10	FSM	ENSG00000155886.12	ENST00000286344.4	10899	10	-110	3	-67	0	multi-exon	FALSE	canonical	1	3	junction_8	5.25873758497744	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTTTGTTTGGAGTA	-19788532	True	NA	2	True	AATAAA	-18	NA	19789104	19507454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19516403_19520893_19521061_19528048_19528139_19550136_19550269_19573350_19573470_19576923_19577023_19619583_19619693_19622260_19622300_19785936_19787020_19788884
WTC11_00089414	chr9	-	328	2	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	-21326341	False	NA	-2	True	AATAAA	-17	NA	21329388	21324051	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_21324322_21329330
WTC11_00089416	chr9	-	327	1	FSM	ENSG00000184995.7	ENST00000448696.4	1475	1	1136	12	1136	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTTCAAATGGGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	21481177	21480850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21480800_21481200
WTC11_00089419	chr9	-	4091	6	NNC	ENSG00000107105.15	novel	3763	6	NA	NA	-964	535	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	39.5898977013076	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAACCATGAACTCTG	-23822299	False	NA	NA	False	NA	NA	NA	23822812	23689568	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23822765
WTC11_00089420	chr9	-	1588	6	NIC	ENSG00000107105.15	novel	3691	8	NA	NA	66	-405	combination_of_known_splicesites	FALSE	canonical	1	9	junction_1	54.6713819104657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGGCTTTGTGTTGT	-23820901	False	NA	NA	False	NA	NA	NA	23821414	23692215	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_23692888_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
WTC11_00089421	chr9	-	347	1	FSM	ENSG00000232466.1	ENST00000444762.1	372	1	-100	125	-100	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGTCCAGAGCGCAGCT	-26880631	False	NA	NA	False	NA	NA	NA	26880649	26880302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26880300_26880600
WTC11_00089422	chr9	-	494	4	FSM	ENSG00000137055.15	ENST00000487173.5	625	4	0	131	0	62	multi-exon	FALSE	canonical	3	184	junction_3	90.5685743879557	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTCGGTAGTTCTAAA	-26919353	False	NA	64	True	ATTAAA	-7	NA	26919374	26907740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26919309
WTC11_00089423	chr9	-	2630	1	NIC	ENSG00000174482.10	novel	3044	6	NA	NA	344622	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATATTTTTTATACT	NA	False	NA	-5	True	AATAAA	-25	NA	27950709	27948079	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_27948100_27950700
WTC11_00089424	chr9	-	815	7	NNC	ENSG00000174482.10	novel	3044	6	NA	NA	-542061	-213055	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.54729944229879	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAACCAGCAGACAGAAAA	-29212337	False	NA	NA	False	NA	NA	NA	29212347	28293659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_28293761_28295207_28295367_28372835_28372869_28475939_28476026_28670199_28670281_28947817_28947915_29212089
WTC11_00089425	chr9	-	675	4	NNC	ENSG00000165264.11	novel	1361	4	NA	NA	0	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1388.09757902277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGACTACCTACTTT	-32560374	True	NA	-15	True	AGTAAA	-21	NA	32573159	32553687	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32553945_32558909_32558955_32570958_32571053_32572880
WTC11_00089427	chr9	-	2295	9	NNC	ENSG00000137074.20	novel	1938	9	NA	NA	0	23960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.91831108974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGATAACTACCCGCTT	-33024080	True	NA	NA	False	AAAAAG	-29	NA	33025130	32919931	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32919979_32972609_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33024803
WTC11_00089428	chr9	-	4204	13	NNC	ENSG00000122692.9	novel	7136	12	NA	NA	0	70369	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	162.987452652719	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGGCATATTAGTTAAA	-33058076	True	NA	NA	False	NA	NA	NA	33076674	32971395	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32971425_33044725_33047392_33048105_33048259_33053122_33053291_33056112_33056240_33056836_33056965_33057597_33057715_33060464_33060585_33062048_33062178_33068823_33068935_33071739_33071893_33073595_33073807_33076582
WTC11_00089429	chr9	-	3203	9	FSM	ENSG00000137074.20	ENST00000673416.1	3202	9	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_5	146.286480492901	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGTGAGACCC	-32997702	True	NA	NA	False	NA	NA	NA	33001587	32971449	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_32997242_32997349_33001566
WTC11_00089430	chr9	-	2094	7	FSM	ENSG00000137074.20	ENST00000673485.1	2106	7	14	-2	14	0	multi-exon	FALSE	canonical	0	0	junction_5	125.918514215433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	32990074	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758
WTC11_00089431	chr9	-	2033	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	145.088994505202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-33024067	True	NA	-9	True	AATAAA	-14	NA	33025117	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33024999
WTC11_00089432	chr9	-	1775	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	29	86048	0	0	5prime_fragment	FALSE	canonical	3	94	junction_5	93.289761452352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	-32997694	True	NA	-42	True	AAAAAG	-20	NA	33001579	32972648	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
WTC11_00089433	chr9	-	1145	8	NIC	ENSG00000137074.20	novel	1184	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	128.379698312371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-33024059	True	NA	-7	True	ATTAAA	-21	NA	33025109	32973375	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024999
WTC11_00089434	chr9	-	230	1	FSM	ENSG00000236184.1	ENST00000415066.1	844	1	454	160	454	-160	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAGATATGGAAAAACT	-32979928	False	NA	NA	False	NA	NA	NA	32979949	32979719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32979700_32979900
WTC11_00089435	chr9	-	599	1	FSM	ENSG00000225693.1	ENST00000425356.1	484	1	13	-128	13	128	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTTTTCTCTGGTTC	-33019102	False	NA	NA	False	NA	NA	NA	33020152	33019553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33019600_33020200
WTC11_00089436	chr9	-	4118	27	NIC	ENSG00000137073.24	novel	4275	29	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_19	72.3164479150715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATGGTCTCTGTGTGGT	-34043815	True	NA	-10	True	AATAAA	-12	NA	34048867	33921695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33960825_33960879_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
WTC11_00089438	chr9	-	3608	6	FSM	ENSG00000164970.15	ENST00000379080.5	3591	6	0	-17	0	17	multi-exon	FALSE	canonical	1	4	junction_5	32.8426551910773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGGGCAAGGGGCAG	-34456711	True	NA	NA	False	ATTAAA	-34	NA	34458552	34398166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458236
WTC11_00089439	chr9	-	2177	6	NIC	ENSG00000261215.1	novel	3264	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	102.228371795701	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAGTATAATCTCCAA	-34664410	True	NA	NA	False	AATAAA	-18	NA	34666028	34661902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_34662080_34662283_34662417_34663502_34665191_34665313_34665374_34665612_34665681_34665977
WTC11_00089441	chr9	-	4035	1	FSM	ENSG00000273597.1	ENST00000621125.1	1653	1	-39	-2343	-39	2343	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACCAAAAATACAAAAATT	NA	False	NA	NA	False	NA	NA	NA	35003033	34998998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34999000_35003000
WTC11_00089444	chr9	-	4122	12	NIC	ENSG00000165282.14	novel	2588	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_11	44.9931124205612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTCTACTATTTAAAAAA	-35096540	False	NA	NA	False	NA	NA	NA	35096550	35088734	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
WTC11_00089446	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	7.07879756738388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	-35115413	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
WTC11_00089447	chr9	-	1054	6	FSM	ENSG00000215187.13	ENST00000399742.7	1054	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGGCTCCTCCTCCCT	-35563856	True	NA	NA	False	AATAAA	-25	NA	35563878	35561830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35562096_35562379_35562575_35562648_35562701_35562874_35563081_35563165_35563390_35563766
WTC11_00089448	chr9	-	523	1	FSM	ENSG00000288586.1	ENST00000673624.1	1703	1	1168	12	1168	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACCGACACTGGGTTC	-35603941	False	NA	NA	False	NA	NA	NA	35603971	35603448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35603400_35604000
WTC11_00089449	chr9	-	777	6	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1376	-291	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	9.51630180269626	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCTTCCTAACCTGAG	-35616967	False	NA	NA	False	NA	NA	NA	35616977	35610275	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35610301_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
WTC11_00089451	chr9	-	1496	9	NNC	ENSG00000137135.18	novel	3678	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	78.455003027213	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTATTTTTATGTTGTG	-35662378	True	NA	-18	True	NA	NA	NA	35665192	35661518	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35662000_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00089452	chr9	-	1251	9	NIC	ENSG00000198467.16	novel	1018	9	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	125.066732187261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35689795	False	NA	-21	True	AATAAA	-17	NA	35689814	35682013	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00089453	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	-35756559	False	NA	-3	True	AATAAA	-17	NA	35756613	35752991	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35753281_35753659_35753769_35756496
WTC11_00089454	chr9	-	718	2	FSM	ENSG00000137133.11	ENST00000490578.1	717	2	0	-1	0	1	multi-exon	FALSE	canonical	3	436	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	-35813758	False	2032	1	True	AATAAA	-17	NA	35813770	35812958	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813550_35813643
WTC11_00089455	chr9	-	5263	12	FSM	ENSG00000159921.20	ENST00000642385.2	5263	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.17390555754509	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTATTTTGTTTTG	-36257710	True	NA	0	True	AATAAA	-19	NA	36258448	36214440	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36217601_36218182_36218300_36219837_36220021_36222776_36222999_36223372_36223503_36227247_36227459_36229020_36229109_36233919_36234133_36236831_36236985_36246030_36246483_36249191_36249398_36258320
WTC11_00089456	chr9	-	4833	11	NIC	ENSG00000137075.18	novel	4985	12	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	42.5968308680352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	-36400959	True	NA	-1	True	AATAAA	-25	NA	36401188	36336395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36401097
WTC11_00089457	chr9	-	5170	12	NIC	ENSG00000137075.18	novel	4945	11	NA	NA	-116	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_10	32.5020024812204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	-36484013	True	NA	-1	True	AATAAA	-25	NA	36487664	36336395	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36424612_36424684_36487307
WTC11_00089458	chr9	-	1366	1	FSM	ENSG00000260100.1	ENST00000569583.1	964	1	458	-860	458	860	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCGTAGACTGCTCTAT	NA	False	NA	NA	False	AATAAA	-23	NA	37079318	37077952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37078000_37079300
WTC11_00089459	chr9	-	4673	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	17	0	17	0	multi-exon	FALSE	canonical	2	11	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	-37465130	True	NA	0	True	AATAAA	-27	NA	37465433	37438101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37442556_37465214
WTC11_00089460	chr9	-	765	4	NNC	ENSG00000175768.13	novel	706	2	NA	NA	0	32481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2347.59451353934	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACGACAAAAAAAGAAAACT	-37583574	True	NA	NA	False	NA	NA	NA	37592596	37550164	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_37550201_37579883_37579908_37588412_37588933_37592411
WTC11_00089461	chr9	-	1417	1	FSM	ENSG00000225345.3	ENST00000424993.1	835	1	0	-582	0	-535	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTCCTCTTGCCGTGT	NA	False	NA	NA	False	NA	NA	NA	38568211	38566794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38566800_38568200
WTC11_00089462	chr9	-	2371	11	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	90	5793	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	6.32139225171164	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGTATAATTCCATTT	-38620493	False	NA	NA	False	AATAAA	-20	NA	38620506	38595375	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_38596404_38601130_38601202_38603158_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
WTC11_00089463	chr9	-	7978	24	NIC	ENSG00000106714.18	novel	13150	24	NA	NA	-172	2568	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	6.48394848080252	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGATGGCTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	39288487	39070198	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_39074012_39078384_39078457_39078689_39078921_39085735_39085824_39086715_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133133_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992_39239187_39266895_39267007_39287979
WTC11_00089464	chr9	-	5064	24	FSM	ENSG00000106714.18	ENST00000297668.11	13150	24	29	8057	29	0	multi-exon	FALSE	canonical	3	9	junction_12	6.71763753594016	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTAATTCCTTTTCTA	NA	False	NA	2	True	ATTAAA	-18	NA	39288138	39072766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39074012_39078384_39078457_39078689_39078921_39085735_39085824_39086715_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133136_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992_39239187_39266895_39267007_39287979
WTC11_00089465	chr9	-	911	3	NNC	ENSG00000278175.5	novel	902	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	38.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCCAGTTCTTTTATA	NA	False	NA	NA	False	AATAAA	-30	NA	39810160	39803480	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_39803860_39809485_39809588_39809730
WTC11_00089466	chr9	-	1861	3	FSM	ENSG00000278175.5	ENST00000627065.3	1884	3	39	-16	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTCTTAAAAAAAAAAA	-39809647	True	NA	NA	False	NA	NA	NA	39810089	39807389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39808762_39809485_39809616_39809730
WTC11_00089468	chr9	-	1055	3	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-849	-107555	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	22.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTCCTCTGTGCAAA	NA	False	NA	NA	False	AATAAA	-15	NA	40107460	40091347	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_40092164_40106357_40106554_40107417
WTC11_00089469	chr9	-	1623	15	NIC	ENSG00000215126.11	novel	1554	16	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	47	junction_7	424.558528212013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAACACAAGTAAGT	NA	False	NA	NA	False	ATTAAA	-1	NA	41189301	41131369	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
WTC11_00089470	chr9	-	1455	16	NIC	ENSG00000215126.11	novel	1813	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_9	424.001519913418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189301	41131677	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41170283_41170424_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
WTC11_00089472	chr9	-	1277	14	NIC	ENSG00000215126.11	novel	1813	16	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	433.642423523449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAAAAATAAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	41189375	41131702	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
WTC11_00089473	chr9	-	4109	1	FSM	ENSG00000279561.3	ENST00000633881.1	4082	1	-28	1	-28	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGCACATTCTGAAATG	NA	False	NA	NA	False	AATAAA	-19	NA	41274025	41269916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41269900_41274000
WTC11_00089474	chr9	-	2275	2	FSM	ENSG00000237357.2	ENST00000435586.1	2579	2	0	304	0	10	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCTGTTTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	42569353	42566982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_42568933_42569028
WTC11_00089475	chr9	-	640	3	NIC	ENSG00000204802.3	novel	1480	3	NA	NA	136	-15	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	36	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCCTATTTAAAGATAT	NA	False	NA	NA	False	AATAAA	-2	NA	62376644	62375346	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_62375529_62376071_62376383_62376497
WTC11_00089476	chr9	-	1135	1	FSM	ENSG00000227582.2	ENST00000435875.1	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCTCACCACTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	62862007	62860872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62860900_62862000
WTC11_00089478	chr9	-	455	3	NNC	ENSG00000237238.3	novel	1120	8	NA	NA	-329	-6477	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGGAAGAAATTGACC	-63385347	True	NA	NA	False	AATGAA	-10	NA	63385446	63379279	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_63379295_63379939_63380012_63385078
WTC11_00089479	chr9	-	912	1	FSM	ENSG00000232815.1	ENST00000455245.1	715	1	201	-398	201	398	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTCTGTGGCTCAAC	-63818240	False	NA	NA	False	NA	NA	NA	63818261	63817349	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_63817300_63818300
WTC11_00089480	chr9	-	1057	8	NNC	ENSG00000204778.4	novel	655	9	NA	NA	8503	62786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	721.207490877597	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65314512	65225127	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65225145_65287487_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65314374
WTC11_00089481	chr9	-	701	10	NNC	ENSG00000204778.4	novel	655	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	14	junction_7	687.10387016452	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACACTAGTGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	65323015	65287913	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65317608_65317655_65318515_65318561_65321192_65321280_65322968
WTC11_00089482	chr9	-	290	2	Antisense	novelGene_ENSG00000274349.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCGCCTTTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	66864070	66838544	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_66838825_66864060
WTC11_00089483	chr9	-	384	1	FSM	ENSG00000278763.1	ENST00000610601.1	213	1	26	-197	26	197	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGAGATCCGTGTC	-67725865	False	NA	NA	False	AAAAAG	-27	NA	67725876	67725492	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_67725500_67725900
WTC11_00089484	chr9	-	9990	7	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	19.5362910161235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTGTGATTTTGTT	-69752884	True	NA	-1	True	AGTAAA	-21	NA	69760072	69709521	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_69718566_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69759852
WTC11_00089485	chr9	-	10089	8	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	13.2634221582116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAATGAGTGTTAAGTG	-69752823	True	NA	-11	True	AGTAAA	-11	NA	69760011	69709531	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_69718566_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
WTC11_00089487	chr9	-	4140	25	NNC	ENSG00000083067.24	novel	2075	8	NA	NA	-117	-10628	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.30461015427985	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCAACATGTGAATACC	NA	False	NA	NA	False	NA	NA	NA	71121738	70546580	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_70546666_70549541_70549675_70552843_70553044_70553159_70553311_70591030_70591206_70598418_70598671_70603341_70603471_70610608_70610750_70615907_70616076_70618866_70619096_70620075_70620366_70621243_70621274_70625190_70625332_70635210_70635262_70639059_70639195_70640559_70640661_70681505_70681579_70761600_70761725_70784104_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431_70864512_71121177
WTC11_00089489	chr9	-	298	1	FSM	ENSG00000224437.2	ENST00000423148.2	505	1	103	104	103	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAAGTGGACCTGTT	NA	False	NA	NA	False	NA	NA	NA	70917398	70917100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_70917100_70917400
WTC11_00089491	chr9	-	256	1	FSM	ENSG00000236060.2	ENST00000423240.1	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTAGCCCGGATGCCCA	NA	False	NA	NA	False	NA	NA	NA	72008136	72007880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72007900_72008100
WTC11_00089492	chr9	-	553	4	FSM	ENSG00000107372.13	ENST00000471197.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_3	44.1437047229462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTCTTGTGAAGAG	-72360262	False	NA	-93	True	NA	NA	NA	72360285	72355954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109
WTC11_00089494	chr9	-	2094	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8124228384477	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	-72952966	True	NA	-2	True	AATAAA	-16	NA	72953051	72900670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
WTC11_00089496	chr9	-	7217	4	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	5	junction_2	7.54247233265651	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTCTTGATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74093161	74002771	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_74003121_74004560_74006235_74042308_74042388_74088046
WTC11_00089497	chr9	-	7071	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACACTTCTTTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	74092806	74085735	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_74085700_74092800
WTC11_00089498	chr9	-	168	1	FSM	ENSG00000278040.1	ENST00000615099.1	168	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGTAAAGACTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	75016848	75016680	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75016700_75016800
WTC11_00089499	chr9	-	1012	2	FSM	ENSG00000156017.13	ENST00000376830.3	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAGTACATAGAAACTG	-75021941	True	NA	NA	False	TATAAA	-11	NA	75028423	75016848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75017449_75028011
WTC11_00089500	chr9	-	1388	10	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	23.165001272407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	-75087002	True	NA	-1	True	AATAAA	-19	NA	75088126	75061199	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078612_75083086_75083151_75088007
WTC11_00089503	chr9	-	354	2	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTATGCCTTTAGCTCC	NA	False	NA	NA	False	GATAAA	-19	NA	80177087	80139271	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_80139615_80177076
WTC11_00089506	chr9	-	4056	19	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	14	0	combination_of_known_splicesites	TRUE	canonical	2	10	junction_12	225.96178525375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676716	True	NA	79	True	AGTAAA	-18	NA	81689533	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611957_81613421_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00089508	chr9	-	4208	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_13	252.582758440666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676718	True	NA	79	True	AGTAAA	-18	NA	81689535	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81612291_81612394_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00089509	chr9	-	4118	19	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_12	189.419059882879	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676730	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00089510	chr9	-	4165	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_14	156.04530913858	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676730	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00089511	chr9	-	4253	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-91	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_8	185.511496235293	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81689626	False	NA	79	True	AGTAAA	-18	NA	81689638	81583682	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611957_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00089512	chr9	-	2023	1	FSM	ENSG00000230360.1	ENST00000417796.1	2614	1	645	-54	645	54	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGATGCTGAAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	82088123	82086100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_82086100_82088100
WTC11_00089513	chr9	-	1047	5	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141375	2444	multi-exon	FALSE	canonical	1	2	junction_1	33.7518518010494	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACCACAGATGGGGTG	-82885787	True	NA	59	True	AATGAA	-38	NA	82886167	82741622	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_82742284_82744233_82744445_82782325_82782383_82831037_82831127_82886138
WTC11_00089516	chr9	-	832	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCCTGTGGGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	83270833	83270001	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_83270000_83270800
WTC11_00089517	chr9	-	471	3	FSM	ENSG00000135018.14	ENST00000529923.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	518.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATTTGGTGCCTGGAGT	-83707567	False	NA	NA	False	NA	NA	NA	83707601	83677751	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83677962_83678440_83678600_83707499
WTC11_00089518	chr9	-	1805	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_5	13.8831932766045	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGATTTGTTAAGTT	-83817027	True	NA	0	True	AATAAA	-22	NA	83817769	83739420	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
WTC11_00089519	chr9	-	7257	18	FSM	ENSG00000165115.15	ENST00000297814.7	7257	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	4.56176375772736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTAAAGTACTAGTTA	-83920674	True	NA	NA	False	AATAAA	-18	NA	83921432	83834098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83837486_83842236_83842402_83850098_83850298_83853628_83853836_83859155_83859372_83867683_83867861_83870518_83870633_83880296_83880495_83883812_83884019_83887040_83887197_83888488_83888593_83889083_83889254_83891294_83891502_83899660_83899805_83903059_83904019_83908451_83908653_83915293_83915679_83921370
WTC11_00089520	chr9	-	1030	5	FSM	ENSG00000165115.15	ENST00000376347.1	1030	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	4.08503365959205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTACTGTCTTGAAG	NA	False	NA	NA	False	AGTAAA	-15	NA	83889270	83880117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83880495_83883812_83884019_83887040_83887197_83888488_83888593_83889083
WTC11_00089525	chr9	-	789	7	FSM	ENSG00000135049.16	ENST00000491784.3	789	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	75.2804017582856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGAGTTATTTTCTTCT	-85692781	True	NA	NA	False	NA	NA	NA	85692792	85657437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85681267_85681336_85692688
WTC11_00089526	chr9	-	5650	28	NNC	ENSG00000083223.18	novel	5724	28	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	18.8076685174353	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-86353083	True	NA	-24	True	AATAAA	-21	NA	86354393	86287732	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_86288745_86298766_86298831_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
WTC11_00089527	chr9	-	3145	1	FSM	ENSG00000180447.7	ENST00000298743.9	3145	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTAGTTACTTTCCA	-86947324	False	182	NA	False	ATTAAA	-35	NA	86947506	86944361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86944400_86947500
WTC11_00089528	chr9	-	290	2	NNC	ENSG00000289166.1	novel	296	2	NA	NA	-26738	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTCTCCTCTTCCTT	-87412783	True	NA	-1	True	AATAAA	-17	NA	87413367	87384844	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_87385077_87413309
WTC11_00089529	chr9	-	13176	2	Antisense	novelGene_ENSG00000288968.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	171	junction_1	0	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATTCACTGGCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	87423600	87410393	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_87416467_87416497
WTC11_00089532	chr9	-	1393	5	NNC	ENSG00000224945.1	novel	585	3	NA	NA	-68871	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	17.9234483289349	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTATGTCCATGGAGT	-89177916	True	NA	-2	True	ATTAAA	-21	NA	89178805	89088604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_89088936_89109047_89109129_89109479_89109571_89112555_89112627_89177986
WTC11_00089533	chr9	-	3300	1	FSM	ENSG00000273381.1	ENST00000608358.1	4125	1	-75	900	-75	-900	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCACTAGCTAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	91210374	91207074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91207100_91210400
WTC11_00089534	chr9	-	1647	11	NNC	ENSG00000148090.12	novel	1574	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	111.109900548961	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTACCCCATTCT	-91355288	True	NA	NA	False	AATAAA	-25	NA	91361913	91213814	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91360370_91360441_91361627
WTC11_00089536	chr9	-	3413	11	ISM	ENSG00000090054.16	ENST00000644140.1	2792	16	44151	-125	8853	0	3prime_fragment	FALSE	canonical	3	112	junction_10	202.119865426435	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-92071199	False	NA	-11	True	AATAAA	-14	NA	92071223	92031146	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92070123
WTC11_00089539	chr9	-	4255	17	NNC	ENSG00000198000.12	novel	4075	17	NA	NA	0	54	at_least_one_novel_splicesite	TRUE	non_canonical	1	39	junction_16	55.8893647642376	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATAAGAGTTCTGTGAGG	-92321609	True	NA	53	True	AATATA	-20	NA	92325350	92297303	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316137_92318615_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
WTC11_00089540	chr9	-	4051	17	NIC	ENSG00000198000.12	novel	4075	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	65.0402519598441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-92321597	True	NA	-1	True	GATAAA	-24	NA	92325338	92297357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
WTC11_00089542	chr9	-	5068	1	FSM	ENSG00000226721.2	ENST00000433698.2	843	1	-4221	-4	-4221	4	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTGTGTGCGCC	NA	False	NA	NA	False	NA	NA	NA	92841889	92836821	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92836800_92841900
WTC11_00089545	chr9	-	1227	5	NNC	ENSG00000131669.10	novel	861	5	NA	NA	0	66173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.439617194789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAAACATATGGGCTTCC	-93129998	True	NA	NA	False	NA	NA	NA	93134219	93055322	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93055349_93121499_93122231_93124898_93125063_93126409_93126639_93134142
WTC11_00089546	chr9	-	1317	5	NNC	ENSG00000131669.10	novel	1237	4	NA	NA	-55	39185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.439617194789	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAGGCCTAAAAAATG	-93130085	True	NA	NA	False	NA	NA	NA	93134306	93082310	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93082336_93121495_93122231_93124898_93125063_93126409_93126639_93134142
WTC11_00089547	chr9	-	740	6	NNC	ENSG00000204352.4	novel	1154	5	NA	NA	-230	-241	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	36.1684945774634	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCCCCAGCGTCCCG	-93346587	False	NA	NA	False	NA	NA	NA	93346644	93318439	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073_93346217_93346619
WTC11_00089548	chr9	-	1398	2	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	-93349378	False	NA	NA	False	NA	NA	NA	93349435	93347933	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_93348639_93348742
WTC11_00089549	chr9	-	5368	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	93353311	93347943	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_93347900_93353300
WTC11_00089551	chr9	-	1746	14	NIC	ENSG00000158169.13	novel	680	7	NA	NA	0	27	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	12.0472442772012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCCTGCCTCTTCCT	-95317255	False	NA	NA	False	AATAAA	-16	NA	95317671	95107320	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_95107514_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
WTC11_00089552	chr9	-	2390	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	-3	0	3	multi-exon	FALSE	canonical	2	6	junction_1	11.1599452820444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACGTATGTATTTGAGGA	-95317255	False	NA	NA	False	AATAAA	-21	NA	95317671	95110508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
WTC11_00089553	chr9	-	8655	24	FSM	ENSG00000185920.18	ENST00000331920.11	8662	24	7	0	7	0	multi-exon	FALSE	canonical	2	5	junction_23	8.31401667943574	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCAGTGAAGGTGTC	-95508720	True	NA	-9	True	AATAAA	-18	NA	95509259	95442979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95446392_95446910_95447452_95449068_95449324_95449840_95449941_95453477_95453621_95456275_95456414_95458012_95458294_95459599_95459784_95461855_95461999_95467115_95467426_95468750_95469154_95469812_95469932_95476033_95476160_95476758_95476858_95477546_95477703_95478054_95478187_95478999_95479148_95479968_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95506406_95506600_95508160
WTC11_00089554	chr9	-	6993	23	FSM	ENSG00000185920.18	ENST00000692981.1	7000	23	20	-13	20	0	multi-exon	FALSE	canonical	2	7	junction_2	7.43845269611878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTTGTTTGTAGAATG	-95505291	True	NA	-7	True	AATAAA	-22	NA	95505855	95443411	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95446392_95446910_95447452_95449068_95449324_95449840_95449941_95453477_95453621_95456275_95456414_95458012_95458294_95459599_95459784_95461855_95461999_95467115_95467426_95468750_95469154_95469812_95469932_95476033_95476160_95476758_95476858_95477546_95477703_95478054_95478187_95478999_95479148_95479968_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95505793
WTC11_00089555	chr9	-	1118	6	NIC	ENSG00000130958.13	novel	1337	9	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	39.92192380134	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCATCATGTGATATTA	-96382345	True	NA	-6	True	AATAAA	-17	NA	96383675	96320705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96321342_96321997_96322081_96324090_96324170_96364463_96364551_96368271_96368306_96383476
WTC11_00089556	chr9	-	1281	5	ISM	ENSG00000130958.13	ENST00000375257.2	886	6	3	468	3	-468	5prime_fragment	FALSE	canonical	3	92	junction_1	8.01171017948103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCTCTGCTCCCTTTCC	-96382345	True	NA	NA	False	AATATA	-17	NA	96383675	96351216	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
WTC11_00089558	chr9	-	518	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTCTTTGGAAGTAT	-96521485	False	NA	NA	False	ATTAAA	-22	NA	96521498	96520980	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_96521000_96521500
WTC11_00089559	chr9	-	2704	6	FSM	ENSG00000158122.12	ENST00000446045.1	2723	6	0	19	0	-19	multi-exon	FALSE	canonical	1	2	junction_5	18.8616012045637	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATTTCTCATTTAAAC	-96653815	True	NA	-16	True	AATAAA	-2	NA	96655303	96639595	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655251
WTC11_00089561	chr9	-	836	5	FSM	ENSG00000196312.15	ENST00000637409.1	836	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.512191496766	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGGACCTAGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	96942730	96897916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96898128_96902916_96903109_96918642_96918827_96933794_96933916_96942602
WTC11_00089562	chr9	-	1246	8	FSM	ENSG00000196312.15	ENST00000645073.1	1246	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	115.769122808797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGAAAAATTAGCC	-97008078	True	NA	NA	False	NA	NA	NA	97013637	96902983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96903109_96918642_96918827_96933794_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852_96972949_97013258
WTC11_00089563	chr9	-	419	4	FSM	ENSG00000196312.15	ENST00000637076.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	131.653585848114	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCCGTCCCTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	96972941	96918687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96918827_96949554_96949683_96958834_96958898_96972852
WTC11_00089564	chr9	-	4478	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	3	0	-3	multi-exon	FALSE	canonical	3	11	junction_3	304.589586700745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTGTTCTTGTTCTGCA	-97033143	True	NA	-3	True	AGTAAA	-16	NA	97039142	97029679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
WTC11_00089565	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	1	29	junction_4	297.075747916251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033140	True	NA	NA	False	AATAAA	-19	NA	97039139	97032654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
WTC11_00089566	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	54.5475938974397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	-97033140	True	NA	NA	False	AAAAAG	-12	NA	97039139	97032685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
WTC11_00089567	chr9	-	2484	3	Genic_Genomic	ENSG00000228038.1	novel	945	1	NA	NA	-5987	970	multi-exon	FALSE	canonical	3	12	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAACCTATATACTTA	NA	False	NA	-15	True	ATTAAA	-23	NA	97100625	97092723	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_97094770_97095121_97095257_97100322
WTC11_00089568	chr9	-	1560	3	ISM	ENSG00000159712.10_ENSG00000136943.12	ENST00000354752.5	2980	16	58933	-775	-5746	775	3prime_fragment	FALSE	canonical	3	24	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTCAGCACTTTTTT	-97162281	False	NA	81	True	NA	NA	NA	97162302	97155794	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_97156586_97160181_97160403_97161754
WTC11_00089569	chr9	-	1718	5	Fusion	ENSG00000159712.10_ENSG00000136943.12	novel	2228	10	NA	NA	-6438	775	multi-exon	FALSE	canonical	3	10	junction_4	13.9731886124821	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTCAGCACTTTTTT	-97162973	False	NA	81	True	NA	NA	NA	97162994	97155794	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_97156586_97157783_97157830_97160181_97160403_97161754_97161967_97162546
WTC11_00089570	chr9	-	1209	1	FSM	ENSG00000188801.9	ENST00000568013.1	1209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCGAGAAGCTGTAATA	-97199490	False	NA	NA	False	NA	NA	NA	97199511	97198302	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97198300_97199500
WTC11_00089571	chr9	-	6165	1	NIC	ENSG00000159712.10	novel	2980	16	NA	NA	11636	-46865	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGTATCTCAAAGACATAA	-97209565	False	NA	NA	False	TATAAA	-3	NA	97209599	97203434	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_97203400_97209600
WTC11_00089572	chr9	-	1753	3	Antisense	novelGene_ENSG00000289356.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	289.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGATAAAGGTGGGGC	-97212986	False	NA	NA	False	NA	NA	NA	97216891	97214859	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_97215424_97215487_97216380_97216594
WTC11_00089573	chr9	-	923	2	FSM	ENSG00000286375.1	ENST00000667253.1	1133	2	0	210	0	-210	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTCCCAAATTCGATG	-97411885	False	NA	NA	False	AAGAAA	-26	NA	97411908	97403918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97404791_97411857
WTC11_00089574	chr9	-	5543	12	NNC	ENSG00000106789.13	novel	5456	12	NA	NA	-171	10	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	105.351438622521	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGATTTGTTCCACA	-98192787	False	54	6	True	AATAAA	-32	NA	98192808	98120964	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98124906_98126642_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
WTC11_00089575	chr9	-	5375	19	FSM	ENSG00000136928.7	ENST00000259455.4	5499	19	129	-5	129	5	multi-exon	FALSE	canonical	1	4	junction_1	2.96689553840415	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAAACCTGTCGTCTTT	-98708786	False	NA	-20	True	AATAAA	-30	NA	98708806	98288103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98290750_98293784_98293903_98299223_98299354_98303240_98303424_98306120_98306346_98311094_98311206_98362714_98362838_98371463_98371572_98385639_98385773_98388853_98389005_98394174_98394256_98406080_98406142_98453980_98454218_98473145_98473347_98480931_98480998_98496412_98496515_98541872_98542044_98577934_98578073_98708416
WTC11_00089576	chr9	-	3917	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	142.314768500438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCACTTTGACTACATT	-98792558	True	NA	-6	True	ATTAAA	-15	NA	98796539	98731326	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00089577	chr9	-	3355	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	39	177	combination_of_known_junctions	FALSE	canonical	3	104	junction_5	135.411209120795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCACGGGTAGTGAGC	-98792519	True	NA	NA	False	NA	NA	NA	98796500	98731818	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00089578	chr9	-	2681	15	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	122	junction_1	136.06752900299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792541	True	NA	-3	True	AATAAA	-23	NA	98796522	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00089579	chr9	-	3882	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	127.490897278546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCACTTTGACTACAT	-98792558	True	NA	-7	True	ATTAAA	-14	NA	98796539	98731327	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
WTC11_00089580	chr9	-	6669	14	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	209	junction_4	128.632727943649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792556	True	NA	-3	True	AATAAA	-23	NA	98796537	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00089581	chr9	-	6672	14	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	104	junction_4	139.44221088865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792556	True	NA	-3	True	AATAAA	-23	NA	98796537	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00089582	chr9	-	2656	15	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	66	-3	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	144.176355303397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGACTGGCTTGCAGAA	-98792492	True	NA	-10	True	AATAAA	-16	NA	98796473	98732015	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00089583	chr9	-	1102	5	NNC	ENSG00000165138.18	novel	646	3	NA	NA	13	2275	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	242.118127161103	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTACTGGGTTTT	-98792545	True	NA	2	True	AATAAA	-19	NA	98796526	98781294	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98781646_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00089584	chr9	-	555	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	5	1092	5	-1092	multi-exon	FALSE	canonical	2	8	junction_2	7	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAACTGGTATGGCTGA	-99906294	True	NA	-5	True	AATAAA	-29	NA	99906596	99886309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99886696_99894879_99895006_99906553
WTC11_00089585	chr9	-	288	1	FSM	ENSG00000238172.2	ENST00000443417.1	897	1	642	-33	642	33	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTTAAAAAAATAAAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	100117009	100116721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100116700_100117000
WTC11_00089586	chr9	-	12330	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTCTTCTAGTAGAAA	-100144169	True	NA	-17	True	AATAAA	-19	NA	100146221	100133891	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_100133900_100146200
WTC11_00089587	chr9	-	7850	2	Antisense	novelGene_ENSG00000119509.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACAAGTTTATGAATT	-100144153	True	NA	NA	False	AATAAA	-16	NA	100146205	100136367	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_100143979_100145966
WTC11_00089588	chr9	-	210	1	FSM	ENSG00000200966.1	ENST00000364096.1	301	1	-61	152	-61	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCATCCACGATAGAGGA	NA	False	NA	NA	False	NA	NA	NA	100581440	100581230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100581200_100581400
WTC11_00089590	chr9	-	742	1	FSM	ENSG00000270332.3	ENST00000603949.1	672	1	-179	109	-179	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCCTTCCTTTTATC	-104093218	False	NA	NA	False	NA	NA	NA	104093252	104092510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104092500_104093300
WTC11_00089591	chr9	-	240	1	FSM	ENSG00000203396.3	ENST00000269395.6	1077	1	920	-83	920	83	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATGTTGACCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	104328476	104328236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104328200_104328500
WTC11_00089593	chr9	-	6533	36	FSM	ENSG00000070061.16	ENST00000675979.1	5790	36	-9	-734	0	94	multi-exon	FALSE	canonical	2	7	junction_29	43.3654240149915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGACTCTGTCTCAA	-108931021	True	NA	NA	False	NA	NA	NA	108934122	108866803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00089594	chr9	-	7434	35	FSM	ENSG00000070061.16	ENST00000676424.1	7412	35	0	-22	0	-1	multi-exon	FALSE	canonical	2	3	junction_6	44.2879067593074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGAATTTTCCTGGA	-108931012	True	NA	NA	False	AGTAAA	-15	NA	108934113	108867517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881662_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00089595	chr9	-	5715	35	FSM	ENSG00000070061.16	ENST00000675215.1	5695	35	0	-20	0	-1	multi-exon	FALSE	canonical	1	2	junction_29	44.5571150905252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGAATTTTCCTGGA	-108931014	True	NA	NA	False	AGTAAA	-15	NA	108934115	108867517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00089596	chr9	-	5972	37	FSM	ENSG00000070061.16	ENST00000675765.1	5974	37	0	2	0	-1	multi-exon	FALSE	canonical	3	8	junction_13	43.095823463533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGAATTTTCCTGGA	-108931021	True	NA	NA	False	AGTAAA	-15	NA	108934122	108867517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896890_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00089597	chr9	-	7713	16	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	11	-17	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	71.2627688363442	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGGTAAACTTAATCT	-109115785	True	NA	-15	True	AATAAA	-20	NA	109119936	109015151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109087172_109087343_109093474_109093592_109106507_109106610_109108452_109108571_109119334
WTC11_00089599	chr9	-	584	7	NNC	ENSG00000136810.13	novel	737	5	NA	NA	0	97918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3808.59644605318	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTGAGGCTGACAGGC	-110208292	True	NA	NA	False	NA	NA	NA	110256507	110145891	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_110145917_110176604_110176633_110244015_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
WTC11_00089600	chr9	-	3763	5	FSM	ENSG00000198121.15	ENST00000374431.7	3637	5	-115	-11	-73	11	multi-exon	TRUE	canonical	0	0	junction_4	12.1320855585509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTTCTGGTCAGTGC	-111038144	False	NA	2	True	AATAAA	-25	NA	111038158	110873251	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110875723_110941420_110942169_110972072_110972221_110973480_110973559_111037840
WTC11_00089602	chr9	-	2977	16	FSM	ENSG00000106868.17	ENST00000374263.7	2973	16	0	-4	0	2	multi-exon	FALSE	canonical	2	2	junction_2	5.22642856600524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTCCCTTGGTTAAT	-112174900	True	NA	1	True	AGTAAA	-19	NA	112175297	112040780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112041493_112041866_112041961_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
WTC11_00089603	chr9	-	1916	6	FSM	ENSG00000228623.7	ENST00000640409.1	1915	6	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	1.54919333848297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTAATTTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	112969380	112957720	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112959172_112959349_112959452_112959792_112959904_112966649_112966741_112968821_112968942_112969339
WTC11_00089604	chr9	-	1352	1	FSM	ENSG00000284763.1	ENST00000643253.1	422	1	52	-982	52	982	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	NA	False	NA	NA	False	AATAAA	-22	NA	113065904	113064552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113064600_113065900
WTC11_00089605	chr9	-	1392	1	FSM	ENSG00000284962.1	ENST00000645541.1	422	1	12	-982	12	982	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	NA	False	NA	NA	False	AATAAA	-22	NA	113071392	113070000	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113070000_113071400
WTC11_00089606	chr9	-	1385	1	FSM	ENSG00000285076.1	ENST00000645853.1	422	1	12	-975	12	975	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAAGTGTGGCGTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	113076838	113075453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113075500_113076800
WTC11_00089607	chr9	-	1389	1	FSM	ENSG00000284867.1	ENST00000646380.1	422	1	12	-979	12	979	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGCGTTTTCTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	113082280	113080891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113080900_113082300
WTC11_00089609	chr9	-	882	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	171	junction_3	513.64579235111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261624	True	NA	-50	True	AATAAA	-33	NA	113275579	113266991	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113267440_113272426_113272549_113273328_113273439_113275377
WTC11_00089610	chr9	-	1366	2	FSM	ENSG00000165188.14	ENST00000441031.3	1366	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCACTTATTCATTCC	NA	False	NA	NA	False	AGTAAA	-20	NA	113299196	113297092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113298222_113298959
WTC11_00089611	chr9	-	2037	16	ISM	ENSG00000136883.16	ENST00000640217.2	2195	19	834	0	-522	0	3prime_fragment	FALSE	canonical	2	5	junction_1	4.65044800709208	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGGTTCTATCCTC	-114098264	True	NA	-7	True	AATAAA	-19	NA	114098458	114091637	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_114092001_114092332_114092452_114092541_114092643_114093228_114093334_114093406_114093498_114093885_114093973_114094180_114094272_114094352_114094456_114095022_114095128_114095213_114095333_114096050_114096208_114096386_114096479_114097300_114097437_114097606_114097742_114098114_114098191_114098301
WTC11_00089612	chr9	-	7298	22	FSM	ENSG00000106948.17	ENST00000307564.8	7380	22	0	82	0	-82	multi-exon	FALSE	canonical	0	0	junction_6	2.28868854108532	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTCCCCACCCCATC	-114393478	False	143	NA	False	NA	NA	NA	114394405	114334237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114394356
WTC11_00089613	chr9	-	5473	23	Fusion	ENSG00000235119.1_ENSG00000106948.17	novel	7380	22	NA	NA	1716	0	multi-exon	FALSE	canonical	0	0	junction_6	2.27454472785396	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCCGTGTCTCTGCTGT	-114395860	False	NA	-4	True	AAAAAG	-27	NA	114396787	114336130	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114394356_114394411_114396724
WTC11_00089614	chr9	-	4784	11	NIC	ENSG00000095397.16	novel	4070	12	NA	NA	-833	7	intron_retention	FALSE	canonical	3	20	junction_9	16.0689140890105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGTGTGGTTTACCT	NA	False	NA	1	True	AATAAA	-26	NA	114506306	114402072	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114478552_114478772_114504183
WTC11_00089615	chr9	-	1719	2	FSM	ENSG00000095397.16	ENST00000374057.3	1718	2	0	-1	0	1	multi-exon	FALSE	canonical	3	80	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTGATTGGCTTA	-114503967	True	NA	NA	False	AATAAA	-19	NA	114505450	114478319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114478772_114504183
WTC11_00089616	chr9	-	4946	20	FSM	ENSG00000041982.16	ENST00000537320.5	4946	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	4.6856887082221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCCTGGGGCCAACGG	NA	False	NA	NA	False	NA	NA	NA	115091141	115021028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561
WTC11_00089617	chr9	-	406	2	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTCAGAGGCCTGACAA	NA	False	NA	NA	False	NA	NA	NA	115478893	115473199	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_115473486_115478773
WTC11_00089618	chr9	-	3698	2	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-115843987	True	NA	1	True	AATAAA	-24	NA	115844564	115839211	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_115842676_115844330
WTC11_00089619	chr9	-	5361	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	-115843995	True	NA	1	True	AATAAA	-24	NA	115844572	115839211	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_115839200_115844600
WTC11_00089620	chr9	-	2001	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686215	True	NA	-5	True	ATTAAA	-18	NA	116687229	116425227	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
WTC11_00089621	chr9	-	358	1	FSM	ENSG00000234782.3	ENST00000413759.1	514	1	164	-8	164	8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCAATTAGTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	118083218	118082860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_118082900_118083200
WTC11_00089622	chr9	-	9076	8	NNC	ENSG00000119402.18	novel	9142	8	NA	NA	-5	-31	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	54.4531253202501	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTGATTTAGAAATAATA	-120785830	True	NA	-4	True	AATAAA	-19	NA	120793387	120757004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793359
WTC11_00089623	chr9	-	3363	11	NNC	ENSG00000095261.14	novel	3381	10	NA	NA	0	10764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.682789501533	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTTTTAGAGACAACT	-120835366	True	NA	NA	False	NA	NA	NA	120842882	120804731	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_120804758_120816056_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
WTC11_00089626	chr9	-	4147	15	FSM	ENSG00000119403.15	ENST00000373896.8	4149	15	0	2	0	-1	multi-exon	FALSE	canonical	2	13	junction_3	36.5438651709511	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTTCCCTATAGTG	-120875961	True	NA	35	True	TTTAAA	-18	NA	120877188	120855652	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120869181_120869331_120869844_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
WTC11_00089627	chr9	-	6885	8	FSM	ENSG00000056558.11	ENST00000373887.8	4351	8	-2031	-503	346	503	multi-exon	FALSE	canonical	1	1	junction_5	2.43276948084663	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTCCACCCACCT	-120928661	False	NA	NA	False	NA	NA	NA	120928827	120901889	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549
WTC11_00089628	chr9	-	4271	9	FSM	ENSG00000056558.11	ENST00000540010.1	4303	9	32	0	32	0	multi-exon	FALSE	canonical	1	1	junction_5	2.6809513236909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTGACATTGCAT	-120928975	True	NA	-2	True	NA	NA	NA	120929141	120902392	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549_120926689_120929113
WTC11_00089630	chr9	-	535	1	FSM	ENSG00000213467.4	ENST00000439613.2	609	1	51	23	51	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTGATGATGATGAA	NA	False	NA	NA	False	NA	NA	NA	121520373	121519838	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121519800_121520400
WTC11_00089632	chr9	-	8917	21	NIC	ENSG00000056586.16	novel	8964	21	NA	NA	10	0	intron_retention	FALSE	canonical	3	22	junction_1	27.3098425480631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGTTTAATGTCAAT	-122902696	True	NA	1	True	AATAAA	-21	NA	122905331	122844555	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_122849823_122851099_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00089633	chr9	-	8930	21	NNC	ENSG00000056586.16	novel	8964	21	NA	NA	10	0	intron_retention	FALSE	canonical	3	9	junction_3	28.230258588968	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGTTTAATGTCAAT	-122902696	True	NA	1	True	AATAAA	-21	NA	122905331	122844555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_122849823_122851080_122851230_122851322_122851431_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00089634	chr9	-	5746	22	FSM	ENSG00000056586.16	ENST00000498479.5	5746	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	29.7271797421064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCAATGTACTTTATT	-122904236	False	NA	NA	False	TATAAA	-23	NA	122905222	122847554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122849823_122851080_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865542_122865623_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
WTC11_00089635	chr9	-	4436	2	NNC	ENSG00000171448.9	novel	4455	2	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-122930875	True	NA	NA	False	AATAAA	-16	NA	122931497	122915565	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_122919945_122931440
WTC11_00089636	chr9	-	280	1	FSM	ENSG00000222351.1	ENST00000410419.1	107	1	79	-252	79	252	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAATTTATTTCCAC	NA	False	NA	NA	False	NA	NA	NA	122946015	122945735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122945700_122946000
WTC11_00089637	chr9	-	381	1	FSM	ENSG00000213216.2	ENST00000392902.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAGCAACTCTACATTT	NA	False	NA	NA	False	NA	NA	NA	123029753	123029372	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123029400_123029800
WTC11_00089638	chr9	-	3197	17	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-66	-3	intron_retention	FALSE	canonical	3	77	junction_1	181.476539461717	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTAAAATGAATTTCATG	-123268641	False	NA	-27	True	NA	NA	NA	123268652	123121293	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123122327_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
WTC11_00089640	chr9	-	4073	19	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	1	1064	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_18	177.804763576844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGGAAATAGCTGTAAC	-123257285	True	NA	NA	False	AATAAA	-11	NA	123268563	123123974	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236970_123268435
WTC11_00089641	chr9	-	1015	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	71983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	679.151297116482	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTGACATGGAAAGTAG	-124392443	True	NA	NA	False	AAAAAG	-6	NA	124415442	124281481	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124281518_124353469_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
WTC11_00089643	chr9	-	7050	10	FSM	ENSG00000148200.17	ENST00000416460.6	1898	10	0	-5152	0	1	multi-exon	FALSE	canonical	1	3	junction_8	21.5355004069508	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTCTGTGAAGCTTGTC	-124751195	True	NA	-1	True	AATAAA	-23	NA	124771310	124517273	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554559_124733307_124733350_124771019
WTC11_00089644	chr9	-	2587	10	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	105398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2495.45943715163	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTAATTCTTTCATT	-125160051	True	NA	NA	False	NA	NA	NA	125241342	125129454	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125129482_125164218_125164245_125236238_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00089645	chr9	-	246	1	FSM	ENSG00000214593.3	ENST00000453641.1	246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACTGTACCTGCTACCC	NA	False	NA	NA	False	NA	NA	NA	125264090	125263844	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125263800_125264100
WTC11_00089646	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	3708.79912640197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	-127372211	True	NA	-8	True	AATAAA	-20	NA	127451373	127447676	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
WTC11_00089647	chr9	-	1317	4	NNC	ENSG00000160404.18	novel	1500	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	28.6395220320141	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGACTTTTA	-127734240	True	NA	-7	True	AATAAA	-20	NA	127735294	127731522	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127732279_127732563_127732774_127733384_127733561_127735119
WTC11_00089648	chr9	-	2658	10	FSM	ENSG00000095370.20	ENST00000420366.5	2682	10	25	-1	-5	0	multi-exon	TRUE	canonical	2	6	junction_3	5.30780929444275	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCGGGCTCCTG	-127755129	True	NA	0	True	AATAAA	-17	NA	127755279	127738316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755078
WTC11_00089649	chr9	-	2615	11	FSM	ENSG00000095370.20	ENST00000373277.8	2750	11	135	0	66	0	multi-exon	FALSE	canonical	2	6	junction_3	5.93632883186233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCGGGCTCCTG	-127771241	True	NA	0	True	AATAAA	-17	NA	127771303	127738316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127761610_127761651_127771185
WTC11_00089650	chr9	-	2411	6	FSM	ENSG00000160408.16	ENST00000373141.5	2424	6	13	0	13	0	multi-exon	FALSE	canonical	1	7	junction_5	148.700504370362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127894430	False	NA	-11	True	AATAAA	-16	NA	127897395	127885321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897237
WTC11_00089651	chr9	-	2325	6	NIC	ENSG00000160408.16	novel	2448	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_1	147.634142392605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896613	True	NA	-11	True	AATAAA	-16	NA	127899578	127885321	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
WTC11_00089653	chr9	-	2848	1	FSM	ENSG00000160408.16	ENST00000483353.2	2310	1	-1745	1207	-1661	-1207	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCACCTGCGTGTTC	-127905104	False	NA	NA	False	ATTAAA	-22	NA	127907069	127904221	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127904200_127907100
WTC11_00089655	chr9	-	2124	6	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	44.1225565895722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915024	True	NA	-10	True	NA	NA	NA	127916989	127907885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
WTC11_00089657	chr9	-	745	2	FSM	ENSG00000167103.12	ENST00000485562.1	741	2	0	-4	0	4	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGCCCTCTGCTGGTA	-127921791	False	NA	-2	True	ATTAAA	-23	NA	127921911	127920876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127921083_127921372
WTC11_00089658	chr9	-	1572	5	NIC	ENSG00000167103.12	novel	1104	5	NA	NA	-23	-5	intron_retention	FALSE	canonical	3	9	junction_2	28.4725745235657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATGTGACAGGCCCT	-127926641	True	NA	-11	True	ATTAAA	-14	NA	127927407	127920885	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
WTC11_00089659	chr9	-	1840	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066876	True	NA	-2	True	ATTAAA	-24	NA	128067309	128061232	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128061827_128063373_128063901_128066590
WTC11_00089661	chr9	-	2788	18	NIC	ENSG00000148337.22	novel	2907	18	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	162	junction_10	86.5244330154813	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTACTTCTGTCTGG	-128188703	True	NA	-8	True	AATAAA	-26	NA	128191549	128166060	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
WTC11_00089662	chr9	-	2907	18	FSM	ENSG00000148337.22	ENST00000357558.9	2907	18	0	0	0	0	multi-exon	TRUE	canonical	1	25	junction_10	108.733953594817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCACCAGTACTTCTG	-128188743	True	NA	-13	True	AATAAA	-21	NA	128191589	128166065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128178988_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
WTC11_00089663	chr9	-	448	2	FSM	ENSG00000167110.19	ENST00000486411.1	591	2	143	0	143	0	multi-exon	FALSE	canonical	3	105	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGCTGGGCGAGCTG	-128260836	False	NA	NA	False	NA	NA	NA	128260848	128260125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128260190_128260464
WTC11_00089665	chr9	-	4036	15	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	46.0600761207024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	-128770669	True	NA	-1	True	AATACA	-21	NA	128771922	128729785	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128771580
WTC11_00089668	chr9	-	4144	11	FSM	ENSG00000095321.18	ENST00000679716.1	4466	11	334	-12	334	0	multi-exon	FALSE	canonical	3	56	junction_10	6.557438524302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-129107447	False	NA	-1	True	AATAAA	-20	NA	129108124	129094793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129102058_129102399_129103067_129104187_129104307_129107813
WTC11_00089670	chr9	-	2640	14	FSM	ENSG00000095321.18	ENST00000681627.1	2623	14	0	-17	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.4281749811557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-129110060	True	NA	-1	True	AATAAA	-20	NA	129110737	129094793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129096069_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
WTC11_00089671	chr9	-	2073	6	NNC	ENSG00000136827.12	novel	2080	5	NA	NA	0	45387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.833690341546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACCAGCTGAGGTGCTT	-129820484	True	NA	NA	False	NA	NA	NA	129824104	129767554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_129767580_129812941_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
WTC11_00089672	chr9	-	5365	16	NNC	ENSG00000187239.17	novel	5410	16	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	20.8482346708034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038875	True	NA	-15	True	AATAAA	-13	NA	130043146	129887186	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_129890547_129895837_129895997_129899964_129900105_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00089673	chr9	-	5353	16	NIC	ENSG00000187239.17	novel	5410	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	17.7593793685353	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038896	True	NA	-15	True	AATAAA	-13	NA	130043167	129887186	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00089674	chr9	-	6039	16	ISM	ENSG00000187239.17	ENST00000446176.7	5420	17	-22	4694	-17	3387	5prime_fragment	FALSE	canonical	2	14	junction_5	23.974060055726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATTTTAAGTGACTT	-130038940	True	NA	-6	True	AATAAA	-21	NA	130043211	129891880	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00089675	chr9	-	2545	15	NIC	ENSG00000187239.17	novel	5410	16	NA	NA	23	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	16.7638155025663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTGTTTTTACTTAA	-130038873	True	NA	2	True	AGTAAA	-24	NA	130043144	129895262	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00089676	chr9	-	2559	15	ISM	ENSG00000187239.17	ENST00000420781.5	5410	16	59	8083	32	-2	5prime_fragment	FALSE	canonical	3	31	junction_6	16.2468207250979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAAAAGTGTGTGTTTT	-130038864	True	NA	-5	True	AGTAAA	-17	NA	130043135	129895269	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00089678	chr9	-	4401	2	FSM	ENSG00000126882.13	ENST00000372271.4	3927	2	-478	4	-478	-4	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGCTTGGCTAGGTCCT	-131276854	False	NA	NA	False	AATAAA	-13	NA	131276988	131258081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131261351_131275856
WTC11_00089679	chr9	-	6256	24	FSM	ENSG00000107263.19	ENST00000372195.5	6256	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	71.5874813485033	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCGCCCAGCTGCATG	-131736669	True	NA	-2	True	AATAAA	-26	NA	131740074	131576769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589979_131592098_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650128_131650243_131650809_131650950_131739769
WTC11_00089680	chr9	-	6109	23	NIC	ENSG00000107263.19	novel	6760	27	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.9882570896631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCCGCGCCCAGCT	-131736641	True	NA	-7	True	AATAAA	-21	NA	131740046	131576774	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589979_131592098_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650809_131650950_131739769
WTC11_00089681	chr9	-	6105	23	NNC	ENSG00000107263.19	novel	6760	27	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.1578626449016	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCCGCGCCCAGCT	-131736685	True	NA	-7	True	AATAAA	-21	NA	131740090	131576774	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588848_131588987_131589885_131589979_131592098_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650809_131650950_131739769
WTC11_00089682	chr9	-	11249	26	NNC	ENSG00000107290.14	novel	11101	26	NA	NA	34	-84	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	27.5426650852818	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCTGCCATTTGGTTT	-132350356	True	NA	0	True	AGTAAA	-20	NA	132354952	132261439	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354650
WTC11_00089683	chr9	-	3021	20	NNC	ENSG00000125485.18	novel	1051	4	NA	NA	88	55998	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4436910105778	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTGGCTCTGGTTC	-132670292	False	NA	0	True	AATAAA	-20	NA	132670313	132536998	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132537647_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
WTC11_00089684	chr9	-	3065	18	NNC	ENSG00000125485.18	novel	4159	20	NA	NA	1	-1292	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	27.2721767795968	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	-132670121	True	NA	-4	True	NA	NA	NA	132670400	132594288	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132595113_132612086_132612256_132630263_132630379_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
WTC11_00089685	chr9	-	2409	15	FSM	ENSG00000125485.18	ENST00000310532.7	2408	15	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	26.8137948048525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGGTATGCTTTTTA	-132670122	True	NA	NA	False	AATAAA	-19	NA	132670401	132637861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132638364_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
WTC11_00089686	chr9	-	1579	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.96320316489829	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	-132878209	True	NA	NA	False	AATAAA	-16	NA	132878284	132725577	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
WTC11_00089688	chr9	-	8475	22	NIC	ENSG00000165699.15	novel	4039	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	30.9221830713113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGTGGACATGGAG	-132941019	True	NA	-1	True	AATAAA	-21	NA	132944607	132891347	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
WTC11_00089689	chr9	-	8662	23	FSM	ENSG00000165699.15	ENST00000644097.1	8715	23	53	0	-22	0	multi-exon	FALSE	canonical	3	30	junction_12	28.094623173121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	-132944703	False	NA	-6	True	AATAAA	-16	NA	132944716	132891352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
WTC11_00089690	chr9	-	8544	22	NIC	ENSG00000165699.15	novel	8598	23	NA	NA	-2377	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_21	28.9753198601453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAACTGTGAACAAATA	NA	False	NA	-43	True	NA	NA	NA	132931332	132891389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132931208
WTC11_00089691	chr9	-	2196	12	ISM	ENSG00000165699.15	ENST00000644097.1	8715	23	169	18454	8	0	5prime_fragment	FALSE	canonical	3	30	junction_1	28.3163942234562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941012	True	NA	-6	True	AATAAA	-19	NA	132944600	132909806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
WTC11_00089692	chr9	-	1512	7	FSM	ENSG00000148288.13	ENST00000646215.1	1512	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGTGCACACAGTAGC	-133162761	True	NA	NA	False	NA	NA	NA	133163914	133153426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133154262_133155177_133155350_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
WTC11_00089693	chr9	-	2864	6	FSM	ENSG00000148288.13	ENST00000470431.5	2870	6	14	-8	-4	3	multi-exon	FALSE	canonical	2	11	junction_3	1.46969384566991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGATTTTTTTTGTTTT	-133162752	True	NA	-13	True	AATAAA	-25	NA	133163905	133152944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
WTC11_00089695	chr9	-	3715	5	NNC	ENSG00000148297.16	novel	3867	4	NA	NA	76	16113	intron_retention	FALSE	non_canonical	0	0	junction_1	167.476117700405	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATACAAAAATTAGCCAGAT	-133347931	False	NA	NA	False	NA	NA	NA	133347946	133322198	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_133322219_133340905_133344334_133345171_133345253_133346539_133346701_133347921
WTC11_00089696	chr9	-	935	2	FSM	ENSG00000148296.7	ENST00000468290.1	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGCTGGCTCTGTCCCAG	-133313580	False	NA	NA	False	NA	NA	NA	133332939	133331805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133332349_133332547
WTC11_00089697	chr9	-	931	5	FSM	ENSG00000148290.10	ENST00000495952.5	931	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	36.2767142944341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAGACTGCCTTTAT	-133354235	False	NA	-72	True	NA	NA	NA	133354253	133351874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748
WTC11_00089700	chr9	-	2774	3	FSM	ENSG00000196990.9	ENST00000673969.1	2778	3	9	-5	9	5	multi-exon	FALSE	canonical	0	0	junction_1	1.5	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCGTCTTCCGTCCTC	-133609223	True	NA	0	True	AATAAA	-18	NA	133609380	133577075	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133579430_133580130_133580247_133609076
WTC11_00089701	chr9	-	5202	25	NIC	ENSG00000160293.17	novel	5101	28	NA	NA	-226	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	42.0619376303829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCAGCCTTTCGTAC	-133991363	True	NA	-1	True	AATAAA	-20	NA	133992830	133761892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
WTC11_00089703	chr9	-	6773	16	NIC	ENSG00000130559.19	novel	8018	17	NA	NA	9	0	intron_retention	FALSE	canonical	2	15	junction_12	30.0676274791049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATCGTATGTGTGAG	-135907359	True	NA	-11	True	AATAAA	-22	NA	135907537	135809580	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135866455_135866537_135881632_135881795_135882815_135883079_135906999
WTC11_00089704	chr9	-	2991	3	NNC	ENSG00000238227.8	novel	2827	2	NA	NA	-131	29443	intron_retention	FALSE	non_canonical	0	0	junction_1	105	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGAAATGGAGTCTTCC	-136118966	False	NA	NA	False	NA	NA	NA	136119006	136085137	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136085165_136114582_136117025_136118484
WTC11_00089705	chr9	-	318	1	FSM	ENSG00000262075.3	ENST00000573103.2	5021	1	549	4154	549	-4154	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAAAGTGCCGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	136326774	136326456	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136326500_136326800
WTC11_00089706	chr9	-	3820	2	ISM	ENSG00000165684.6	ENST00000298532.2	5010	23	18859	-6	14881	0	intron_retention	FALSE	canonical	3	150	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGTTGTGGTTTTG	-136379926	False	NA	-3	True	AATAAA	-27	NA	136379938	136375570	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136375801_136376348
WTC11_00089707	chr9	-	4693	24	FSM	ENSG00000165684.6	ENST00000684778.1	4693	24	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	21.3017744674742	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGTTGTGGTTTTG	-136394141	True	NA	-3	True	AATAAA	-27	NA	136400170	136375570	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
WTC11_00089709	chr9	-	1537	10	NNC	ENSG00000165689.17	novel	2391	10	NA	NA	6	-29	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_9	184.674555253356	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTAAATATGCAGTCTT	-136403943	True	NA	-52	True	NA	NA	NA	136410587	136402710	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410089_136410202_136410327
WTC11_00089711	chr9	-	3093	2	FSM	ENSG00000148396.19	ENST00000467838.2	1988	2	-953	-152	-953	152	multi-exon	FALSE	canonical	3	285	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGACCCGTCCGGGTCC	-136445016	False	NA	NA	False	GGGGCT	-19	NA	136445035	136439943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822
WTC11_00089712	chr9	-	8910	31	NNC	ENSG00000148396.19	novel	9018	32	NA	NA	-8	0	intron_retention	FALSE	canonical	3	12	junction_6	54.1052574976674	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136476002	True	NA	0	True	AATAAA	-29	NA	136483048	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136446950_136447226_136447362_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
WTC11_00089713	chr9	-	8921	31	NIC	ENSG00000148396.19	novel	9018	32	NA	NA	-16	0	intron_retention	FALSE	canonical	3	68	junction_3	43.9775195096566	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136476010	True	NA	0	True	AATAAA	-29	NA	136483056	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
WTC11_00089714	chr9	-	8861	30	NIC	ENSG00000148396.19	novel	6551	31	NA	NA	-16	0	intron_retention	FALSE	canonical	3	127	junction_2	35.3534892666816	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136476010	True	NA	0	True	AATAAA	-29	NA	136483056	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
WTC11_00089715	chr9	-	9588	35	NNC	ENSG00000148400.13	novel	9649	35	NA	NA	0	4279	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.3418722094648	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTTAGTGGAGGTC	-136541411	True	NA	NA	False	AAAAAG	-1	NA	136546048	136490153	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136490185_136494443_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
WTC11_00089716	chr9	-	9592	35	NNC	ENSG00000148400.13	novel	9649	35	NA	NA	0	4279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3418722094648	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTTAGTGGAGGTC	-136541411	True	NA	NA	False	AAAAAG	-1	NA	136546048	136490153	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136490189_136494443_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
WTC11_00089717	chr9	-	9593	35	NNC	ENSG00000148400.13	novel	9649	35	NA	NA	0	4279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3418722094648	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTTAGTGGAGGTC	-136541411	True	NA	NA	False	AAAAAG	-1	NA	136546048	136490153	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136490190_136494443_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
WTC11_00089720	chr9	-	8096	48	FSM	ENSG00000107331.18	ENST00000371605.7	8151	48	55	0	4	0	multi-exon	TRUE	canonical	2	13	junction_30	8.15490587403654	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGGTCTGCGTGTGTGGG	-137027728	True	NA	-8	True	AATAAA	-14	NA	137028233	137007233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137007965_137008415_137008623_137008730_137008869_137008950_137009054_137009369_137009463_137009540_137009645_137009768_137009904_137009982_137010125_137010192_137010372_137010619_137010738_137010972_137011106_137011185_137011310_137011406_137011555_137011633_137011750_137011843_137012019_137012101_137012163_137012264_137012377_137012484_137012591_137012711_137012926_137013001_137013319_137013460_137013564_137013831_137014039_137014167_137014405_137014689_137014811_137014912_137015098_137015413_137015597_137015674_137015872_137015961_137016175_137016290_137016472_137016573_137016739_137016919_137017125_137017195_137017347_137017501_137017693_137017786_137017902_137017972_137018076_137018177_137018352_137018718_137018816_137018902_137019071_137019177_137019307_137020335_137020496_137020693_137021062_137021391_137021611_137021890_137022002_137022350_137022479_137022701_137022866_137022940_137023053_137024142_137024237_137028074
WTC11_00089722	chr9	-	583	2	FSM	ENSG00000107281.10	ENST00000496498.1	383	2	-200	0	22	0	multi-exon	FALSE	canonical	3	270	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGGGCCTCGGGCTCC	-137040316	False	NA	NA	False	ACTAAA	-25	NA	137040356	137039667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137039865_137039970
WTC11_00089723	chr9	-	2103	9	FSM	ENSG00000054179.12	ENST00000355097.7	2102	9	0	-1	0	1	multi-exon	FALSE	canonical	2	9	junction_1	2.27760839478607	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAAAGGAGAGTGTCTG	-137053690	True	NA	-6	True	AATAAA	-16	NA	137054061	137048105	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137048861_137048940_137049076_137049869_137049990_137050283_137050539_137050901_137051130_137051210_137051371_137051509_137051661_137052230_137052349_137053880
WTC11_00089724	chr9	-	3907	7	NNC	ENSG00000186193.9	novel	3814	6	NA	NA	2	5	intron_retention	FALSE	canonical	3	12	junction_6	97.6633958496677	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTATTTATAGTTCCTT	-137066660	True	NA	NA	False	AATAAA	-27	NA	137070555	137062121	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069703_137069794_137069889
WTC11_00089725	chr9	-	1798	2	FSM	ENSG00000212864.4	ENST00000391553.3	1732	2	-55	-11	-55	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGACTGAAGCTTGCT	-137221726	True	NA	-11	True	ATTAAA	-25	NA	137222295	137220247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137221739_137221988
WTC11_00089727	chr9	-	2781	22	FSM	ENSG00000187609.16	ENST00000340951.9	2781	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.5708382476164	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTCACATGTTTCAT	-137421612	True	NA	-1	True	AATAAA	-37	NA	137423162	137306895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619_137352787_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
WTC11_00089728	chr9	-	1410	9	NNC	ENSG00000187609.16	novel	962	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.3945417290014	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTTTCTCTGATTCT	-137421605	True	NA	NA	False	NA	NA	NA	137423155	137343157	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137343606_137366144_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
WTC11_00089729	chr9	-	1886	10	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	51.9572473823966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575410	True	NA	-9	True	ATTAAA	-18	NA	137578875	137554903	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137577469_137577604_137578624
WTC11_00089730	chr9	+	892	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCAGATCCTCCTTCTTT	12948973	False	NA	NA	False	NA	NA	NA	12948984	12949876	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12949000_12949900
WTC11_00089733	chr9	+	424	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAATATGTGAGA	NA	False	NA	NA	False	AATAAA	-32	NA	30690549	30690973	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_30690500_30691000
WTC11_00089734	chr9	+	480	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	35590785	35591265	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_35590800_35591300
WTC11_00089736	chr9	+	286	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	65653175	65653461	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_65653200_65653500
WTC11_00089737	chr9	+	951	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCTGCACTATGAACTG	69152779	False	NA	NA	False	GATAAA	-23	NA	69152820	69153771	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_69152800_69153800
WTC11_00089738	chr9	+	388	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGCCTCCATATTGAT	NA	False	NA	NA	False	AAAAAG	-15	NA	69407507	69407895	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_69407500_69407900
WTC11_00089739	chr9	+	255	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTACATCTCATTGCC	NA	False	NA	NA	False	ACTAAA	-29	NA	78183362	78183617	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_78183400_78183600
WTC11_00089740	chr9	+	1953	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGATATTATATATA	NA	False	NA	NA	False	CATAAA	-15	NA	79016798	79018751	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_79016800_79018800
WTC11_00089742	chr9	+	222	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGATCATGCACCCCTT	90415256	False	NA	NA	False	NA	NA	NA	90415274	90415496	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_90415300_90415500
WTC11_00089744	chr9	+	1908	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	93310729	93312637	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93310700_93312600
WTC11_00089745	chr9	+	208	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACGTTTTATCCATGGA	NA	False	NA	NA	False	NA	NA	NA	94540376	94540584	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_94540400_94540600
WTC11_00089746	chr9	+	287	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCATTTCTTCTCTTC	NA	False	NA	NA	False	AGTAAA	-31	NA	94543851	94544138	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_94543900_94544100
WTC11_00089747	chr9	+	3075	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAACCCGGTCTCTACT	NA	False	NA	NA	False	NA	NA	NA	97108407	97111482	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97108400_97111500
WTC11_00089749	chr9	+	5939	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGACATCCTGAGGCCT	115482111	False	NA	NA	False	AATAAA	-38	NA	115482133	115488072	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115482100_115488100
WTC11_00089750	chr9	+	276	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAGCTGTGATGGCTTG	NA	False	NA	NA	False	NA	NA	NA	118486257	118486533	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118486300_118486500
WTC11_00089751	chr9	+	1035	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGCGTGTGAGCAGCGC	NA	False	NA	NA	False	NA	NA	NA	137128692	137129727	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_137128700_137129700
WTC11_00089752	chr9	+	2907	2	FSM	ENSG00000227518.5	ENST00000422679.1	2923	2	0	16	0	-16	multi-exon	FALSE	canonical	3	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTTTAAAGTCGCCC	NA	False	NA	NA	False	GATAAA	-2	NA	27656	30875	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_30446_30757
WTC11_00089753	chr9	+	1788	14	FSM	ENSG00000107099.18	ENST00000454469.6	2087	14	0	299	0	-299	multi-exon	FALSE	canonical	1	3	junction_3	1.96116135138184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAACACAGGCTCGGG	214832	True	NA	NA	False	NA	NA	NA	214867	340321	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_215030_271626_271730_286460_286637_289509_289582_304580_304705_311953_312167_317042_317129_325670_325738_328021_328172_332397_332479_334224_334385_336581_336719_339005_339100_340158
WTC11_00089754	chr9	+	581	4	NIC	ENSG00000107104.21	novel	5581	16	NA	NA	6	49	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	15.542057635833	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTAAGCTCTGATCTTT	469406	True	NA	6	True	AATAAA	-17	NA	470303	475514	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_470375_470555_470683_473193_473274_475211
WTC11_00089755	chr9	+	5643	5	FSM	ENSG00000080503.24	ENST00000637103.1	5657	5	-9	23	-9	-23	multi-exon	FALSE	canonical	1	2	junction_4	9.90896059130321	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAATGTATGTCGTTGT	2014693	True	NA	-3	True	AATAAA	-13	NA	2015271	2046014	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2041330
WTC11_00089759	chr9	+	710	2	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	2274252	False	NA	9	True	ACTAAA	-17	NA	2276016	2281484	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2276254_2281011
WTC11_00089762	chr9	+	4683	2	NNC	ENSG00000232104.4	novel	976	3	NA	NA	2	-23586	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCCTCTTGATGCC	3525664	True	NA	NA	False	AATAAA	-21	NA	3526501	3532722	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_3526778_3528315
WTC11_00089763	chr9	+	1429	10	ISM	ENSG00000106688.12	ENST00000262352.8	3698	12	0	10682	0	-8770	5prime_fragment	FALSE	canonical	3	52	junction_7	7.75233935222774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCACTGATACAGGGAT	4489701	True	NA	-48	True	NA	NA	NA	4490467	4576787	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_4490771_4544566_4544708_4561448_4561542_4564343_4564459_4566046_4566090_4567668_4567768_4572203_4572389_4573906_4574015_4576000_4576124_4576568
WTC11_00089764	chr9	+	6335	27	NNC	ENSG00000107036.12	novel	6786	26	NA	NA	2	-491	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	17.6459258250978	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGATCTTTTCAAGT	5627924	True	NA	NA	False	AATAAA	-20	NA	5629120	5776061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_5629454_5656582_5656691_5689958_5690039_5710415_5710475_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
WTC11_00089765	chr9	+	823	1	FSM	ENSG00000233846.2	ENST00000456723.1	487	1	-68	-268	-68	268	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTTTTTTAAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	6278598	6279421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6278600_6279400
WTC11_00089768	chr9	+	2217	10	NIC	ENSG00000107077.19	novel	1064	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	35.4149999607825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTGTCTCTGACTT	NA	False	NA	2	True	AATAAA	-14	NA	7013787	7175644	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7105401_7105501_7128065_7128237_7165237_7165358_7169797_7169891_7174552
WTC11_00089769	chr9	+	659	2	FSM	ENSG00000153714.6	ENST00000489107.1	739	2	0	80	0	-80	multi-exon	FALSE	canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCATGTCTTCTGTAAT	12775618	False	NA	NA	False	NA	NA	NA	12775667	12777498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_12776028_12777199
WTC11_00089770	chr9	+	2466	12	FSM	ENSG00000164975.16	ENST00000467062.5	2574	12	108	0	-27	0	multi-exon	FALSE	canonical	2	4	junction_10	141.946736605876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGACAACAAGATTTCCC	15415706	True	NA	NA	False	AATAAA	-19	NA	15422841	15465953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630_15461806_15462864_15462991_15465509
WTC11_00089771	chr9	+	834	5	FSM	ENSG00000178031.18	ENST00000546040.1	870	5	24	12	24	-12	multi-exon	FALSE	canonical	1	2	junction_2	3.08220700148449	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTCAAAAAGTGTTTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	18657638	18684945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_18657751_18661934_18662074_18680311_18680517_18681811_18681960_18684715
WTC11_00089772	chr9	+	5296	25	NIC	ENSG00000137145.21	novel	6831	32	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_16	14.0118997046558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGGGTACTTTGTCTT	19228090	True	NA	NA	False	AATAAA	-27	NA	19230705	19357695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971
WTC11_00089773	chr9	+	546	1	FSM	ENSG00000273226.1	ENST00000609982.1	546	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTCCTCATCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	19375450	19375996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19375400_19376000
WTC11_00089774	chr9	+	764	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	33	-96214	intron_retention	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTTAATTATCAAGT	20656400	True	NA	7	True	AATAAA	-15	NA	20658341	20673898	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_20658827_20673619
WTC11_00089777	chr9	+	372	1	FSM	ENSG00000236739.3	ENST00000453177.2	535	1	-92	255	-92	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTTTTCTAAACGTAA	NA	False	NA	NA	False	NA	NA	NA	22747607	22747979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22747600_22748000
WTC11_00089778	chr9	+	218	2	FSM	ENSG00000253400.1	ENST00000521572.1	371	2	153	0	153	0	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGTCACTGATGGCAT	NA	False	NA	NA	False	NA	NA	NA	26801885	26805862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26802061_26805819
WTC11_00089779	chr9	+	1400	13	NNC	ENSG00000096872.17	novel	1462	14	NA	NA	-22	-16520	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_12	43.7234840281005	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCTAGTATCAGCTGA	26954202	True	NA	NA	False	ATTAAA	-12	NA	26956389	27020280	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27020000
WTC11_00089782	chr9	+	270	2	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAGTAACAGTCATTT	29450210	True	NA	NA	False	ATTAAA	-16	NA	29450402	29466708	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_29450490_29466525
WTC11_00089784	chr9	+	4590	24	NNC	ENSG00000086102.19	novel	4599	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_11	75.3288191988323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCTGCCTTTTGGTGTT	33286889	True	NA	4	True	ATTAAA	-19	NA	33290527	33371157	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338506_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33351559_33351791_33352645_33352720_33354085_33354188_33354850_33354893_33364009_33364109_33364707_33364775_33366628_33366775_33367514_33367620_33369905
WTC11_00089785	chr9	+	3287	13	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-705	17180	-705	7884	5prime_fragment	FALSE	canonical	3	7	junction_12	5.44862367942584	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAGAACATTTTAGCCA	NA	False	NA	NA	False	AAGAAA	-43	NA	33523545	33555833	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146_33541228_33543184_33543256_33547937_33548856_33550429_33550580_33555707
WTC11_00089786	chr9	+	780	4	FSM	ENSG00000281128.2	ENST00000627688.1	873	4	0	93	0	-72	multi-exon	FALSE	canonical	2	4	junction_2	7.07106781186548	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTTGCCAGAGCTGT	33677123	False	NA	NA	False	NA	NA	NA	33677267	33687918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33677510_33678089_33678288_33680893_33681074_33687758
WTC11_00089787	chr9	+	4550	1	FSM	ENSG00000260947.1	ENST00000566968.1	3528	1	-941	-81	-941	81	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTTTAGACTAGCCAT	NA	False	NA	88	True	NA	NA	NA	33696517	33701067	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33696500_33701100
WTC11_00089788	chr9	+	2250	7	NIC	ENSG00000213930.12	novel	1712	8	NA	NA	0	144	intron_retention	FALSE	canonical	3	248	junction_1	20.3258182833776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTATAGATTCTC	34643609	True	NA	NA	False	NA	NA	NA	34646637	34650742	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
WTC11_00089792	chr9	+	547	1	FSM	ENSG00000178723.7	ENST00000324731.7	1122	1	630	-55	630	55	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCCTCTCCCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	34917804	34918351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34917800_34918400
WTC11_00089794	chr9	+	2654	5	FSM	ENSG00000137094.16	ENST00000682809.1	2651	5	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.93945439068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	34987293	True	NA	18	True	AATAAA	-18	NA	34989744	34998431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34989832_34990498_34990813_34993199_34993445_34996264_34996867_34997025
WTC11_00089795	chr9	+	2351	5	NNC	ENSG00000137094.16	novel	2651	5	NA	NA	0	10765	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	82.1230022588069	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAGAAAAACTTTGTCTAG	34987293	True	NA	NA	False	TTTAAA	-28	NA	34989744	35009665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025_34998428_35009650
WTC11_00089798	chr9	+	598	5	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	2	4422	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	76.8126779900297	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGTGGTTTTTATCT	35656586	True	NA	NA	False	AATAAA	-24	NA	35658318	35665933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35665806
WTC11_00089800	chr9	+	1735	3	FSM	ENSG00000122694.16	ENST00000396613.7	1917	3	175	7	-22	0	multi-exon	FALSE	canonical	1	2	junction_2	27	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	36136055	True	NA	4	True	AATAAA	-19	NA	36136710	36163906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36136792_36147785_36147895_36162361
WTC11_00089801	chr9	+	1088	6	FSM	ENSG00000122705.17	ENST00000396603.6	1090	6	0	2	0	0	multi-exon	FALSE	canonical	1	1	junction_5	726.5247690203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGAAGCTTCTTTA	36152140	True	NA	35	True	AATAAA	-17	NA	36190962	36212057	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36209266_36209321_36211602
WTC11_00089802	chr9	+	2167	16	NIC	ENSG00000165304.8	novel	2342	17	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_9	123.138404515678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGGCTTCTCTTTTTTG	36568372	False	NA	8	True	AATAAA	-15	NA	36572946	36677680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
WTC11_00089803	chr9	+	7931	2	FSM	ENSG00000281649.3	ENST00000654889.1	7911	2	-20	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGGATCATTTGTTTC	37074768	True	NA	NA	False	ATTAAA	-40	NA	37079936	37090242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37084293_37086667
WTC11_00089805	chr9	+	3850	3	NNC	ENSG00000147905.18	novel	1219	4	NA	NA	33	-22064	intron_retention	FALSE	canonical	1	4	junction_2	7.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGAACACGGTATATC	37115138	False	NA	NA	False	ATTAAA	-17	NA	37120668	37164990	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_37121673_37126311_37126943_37162775
WTC11_00089806	chr9	+	4669	1	Genic_Genomic	ENSG00000234160.1	novel	NA	NA	NA	NA	-3433	86	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGTACTAGTTTATG	37505698	False	NA	12	True	AATAAA	-21	NA	37505716	37510385	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_37505700_37510400
WTC11_00089808	chr9	+	4031	2	ISM	ENSG00000165275.10	ENST00000297994.4	2293	9	20687	-745	4935	745	3prime_fragment	FALSE	canonical	3	54	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTATCAACAAATAGAGT	NA	False	NA	NA	False	AAAACA	-25	NA	37774491	37779717	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_37776406_37777600
WTC11_00089809	chr9	+	1168	1	FSM	ENSG00000232433.2	ENST00000453058.2	1193	1	-60	85	-60	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGTGGAAAAATTTACTAA	NA	False	NA	NA	False	AATAAA	-39	NA	40348538	40349706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_40348500_40349700
WTC11_00089810	chr9	+	1230	5	NNC	ENSG00000276291.6	novel	1421	7	NA	NA	0	-1072	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	16.4677715553745	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATTAACTGCTTACT	40990868	True	NA	NA	False	AATAAA	-28	NA	40992260	41014132	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41011616_41011731_41013780
WTC11_00089811	chr9	+	1535	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1399	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	19.3857049280019	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTGAACCATAGGGG	40990868	True	NA	NA	False	AATAAA	-16	NA	40992260	41034532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41032833_41033023_41033938
WTC11_00089812	chr9	+	1857	1	FSM	ENSG00000279456.1	ENST00000624467.1	1628	1	150	-379	150	379	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCCGACTGGCACTG	NA	False	NA	NA	False	NA	NA	NA	41061439	41063296	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41061400_41063300
WTC11_00089814	chr9	+	1533	3	FSM	ENSG00000226007.3	ENST00000450704.1	1549	3	16	0	-11	0	multi-exon	FALSE	canonical	1	3	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	62532352	62534724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62532689_62532802_62532933_62533657
WTC11_00089815	chr9	+	1617	18	NNC	ENSG00000147996.17	novel	1411	16	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	2	16	junction_12	613.694507142508	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669523	True	NA	0	True	AATAAA	-16	NA	65675875	65733670	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65694904_65695045_65698514_65698562_65700250_65700338_65702969_65703015_65703879_65703926_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
WTC11_00089819	chr9	+	1542	14	NIC	ENSG00000196873.16	novel	1685	15	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	90	junction_7	441.068739694954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAATAAAAGGTTATGAC	NA	False	NA	NA	False	ATTAAA	-37	NA	68241990	68299987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
WTC11_00089820	chr9	+	5272	25	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	-252	0	intron_retention	FALSE	canonical	0	0	junction_1	133.896201246836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATACATTGCAATCC	69120918	False	NA	-10	True	NA	NA	NA	69121011	69255180	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121726_69151650_69151772_69185086_69185205_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
WTC11_00089825	chr9	+	2630	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAATGCTCTTTTAAGCAC	NA	False	NA	NA	False	NA	NA	NA	74085731	74088361	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_74085700_74088400
WTC11_00089826	chr9	+	3806	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATTTTACAGAGTTT	74088976	False	NA	13	True	AATAAA	-6	NA	74088990	74092796	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_74089000_74092800
WTC11_00089827	chr9	+	1690	3	NNC	ENSG00000187210.14	novel	5566	4	NA	NA	3	-39626	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	19	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGCCAGTTTCTTT	76457114	True	NA	NA	False	CATAAA	-35	NA	76459224	76462790	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_76459306_76460059_76460178_76461299
WTC11_00089828	chr9	+	2264	1	FSM	ENSG00000204612.1	ENST00000376708.1	1299	1	468	-1433	468	1433	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTGAAGGTGTTTCAG	77020083	False	NA	19	True	ATTAAA	-27	NA	77020122	77022386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_77020100_77022400
WTC11_00089830	chr9	+	2593	14	NIC	ENSG00000148019.14	novel	11233	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	64.6658228050433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	78231291	True	NA	12	True	AATAAA	-25	NA	78236074	78267075	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
WTC11_00089831	chr9	+	3048	17	NIC	ENSG00000148019.14	novel	11233	17	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_15	63.632244184847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGTGTGGTTTTGTTTT	78231291	True	NA	14	True	AATGAA	-12	NA	78236074	78271680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266616_78266704_78270840
WTC11_00089832	chr9	+	3332	19	NIC	ENSG00000106829.20	novel	4886	20	NA	NA	21	159	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	58.6365663522366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCGTTGTATTTGATAC	79567270	True	NA	NA	False	AATAAA	-27	NA	79571985	79725502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
WTC11_00089833	chr9	+	413	2	NNC	ENSG00000228430.9	novel	1301	10	NA	NA	258774	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTTATTTTGTTTTTT	82750655	True	NA	NA	False	AATAAA	-14	NA	82750725	82780191	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_82750826_82779878
WTC11_00089835	chr9	+	632	7	FSM	ENSG00000135040.16	ENST00000416045.4	690	7	0	58	0	-58	multi-exon	FALSE	canonical	1	2	junction_6	96.4140377054434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGATTTTCATGAATAT	85937610	True	NA	NA	False	NA	NA	NA	85941181	85966614	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85966595
WTC11_00089837	chr9	+	2456	3	Genic_Genomic	ENSG00000228373.2	novel	260	1	NA	NA	-33488	161	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGTGGTGGCTTACAC	NA	False	NA	4	True	AATAAA	-15	NA	87390145	87424054	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_87390332_87421634_87421642_87421791
WTC11_00089839	chr9	+	2392	7	FSM	ENSG00000135047.16	ENST00000676480.1	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	13.2413493773608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTACCTGTTTAAATA	87726448	False	NA	-6	True	TTTAAA	-11	NA	87726460	87731354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
WTC11_00089840	chr9	+	4443	3	NIC	ENSG00000213694.6	novel	4837	3	NA	NA	-23	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAAGCCTTTGTGG	88990872	False	NA	-19	True	NA	NA	NA	88990897	89004983	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_88991185_88991469_88991696_89001053
WTC11_00089841	chr9	+	1391	10	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-19	18163	0	0	5prime_fragment	FALSE	canonical	3	78	junction_2	89.5159824339269	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGAGTCTTTCCATCT	89308888	True	NA	NA	False	NA	NA	NA	89318499	89341479	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346
WTC11_00089842	chr9	+	3143	17	NNC	ENSG00000187742.15	novel	3320	17	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_6	97.7228223088138	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308967	False	NA	15	True	AATAAA	-15	NA	89318578	89359642	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334638_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
WTC11_00089844	chr9	+	1551	4	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	40.6639343344389	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAATCCAGTTGCATATG	NA	False	NA	12	True	AATAAA	-23	NA	90412876	90429450	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_90413293_90415022_90415122_90427768_90427834_90428479
WTC11_00089845	chr9	+	408	2	FSM	ENSG00000225511.7	ENST00000444476.1	456	2	0	48	0	-48	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTGTATAGTTTAAATA	92147683	False	NA	NA	False	NA	NA	NA	92147711	92148258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92147783_92147921
WTC11_00089848	chr9	+	6291	25	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	-2	-1573	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	11.3541475535007	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCCTCTCCAACCTC	93183414	False	NA	NA	False	NA	NA	NA	93184927	93317631	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292310_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519
WTC11_00089850	chr9	+	3435	2	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	93347970	False	NA	33	True	AATAAA	-24	NA	93348009	93353310	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93348187_93350052
WTC11_00089851	chr9	+	2613	4	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	41	junction_3	8.48528137423857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGAGGTATTG	93347997	False	NA	10	True	AATAAA	-18	NA	93348036	93364642	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93348187_93350052_93350155_93357246_93357287_93362321
WTC11_00089853	chr9	+	3554	9	FSM	ENSG00000048828.17	ENST00000375389.7	3585	9	0	31	0	-31	multi-exon	FALSE	canonical	3	44	junction_5	16.6278193098193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGTATAATTAAATAAAAT	93451835	False	NA	NA	False	CATAAA	-16	NA	93451890	93531375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352
WTC11_00089855	chr9	+	2383	1	FSM	ENSG00000199072.3	ENST00000362202.3	87	1	69	-2365	69	2365	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAGAAGACCAGCAAGA	94176404	False	NA	NA	False	NA	NA	NA	94176415	94178798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94176400_94178800
WTC11_00089856	chr9	+	4478	5	NNC	ENSG00000175787.17	novel	2374	5	NA	NA	7	2138	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	7.17635004720366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCTATGTACCTCAT	94258830	True	NA	10	True	AATAAA	-22	NA	94259334	94303967	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299811
WTC11_00089857	chr9	+	3243	11	NIC	ENSG00000148110.17	novel	3402	12	NA	NA	-78	-122	combination_of_known_splicesites	FALSE	canonical	3	61	junction_4	94.1004250787423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCTTTTTTTTA	94367722	True	NA	10	True	AATAAA	-20	NA	94374490	94460920	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_94374928_94415157_94415254_94429188_94429252_94438400_94438529_94444963_94445183_94446822_94446937_94451455_94451528_94453957_94454071_94456239_94456338_94458321_94458465_94459160
WTC11_00089861	chr9	+	1794	9	NNC	ENSG00000130956.14	novel	2651	8	NA	NA	93	-838	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	88.7791325425069	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTACTGTTTACTTGTAA	96448774	False	NA	9	True	ATTAAA	-10	NA	96450293	96490498	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96466943_96467050_96471010_96471095_96484461_96484634_96488088_96488275_96489981
WTC11_00089862	chr9	+	7861	3	Fusion	ENSG00000235494.2_ENSG00000289356.1	novel	623	4	NA	NA	-42	-5924	multi-exon	FALSE	canonical	0	0	junction_1	0.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGATAAAAGAGAAGTATT	97213882	False	NA	NA	False	NA	NA	NA	97214791	97229090	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_+_97216492_97216706_97222814_97229036
WTC11_00089865	chr9	+	2223	17	ISM	ENSG00000255036.6	ENST00000532526.5	5330	43	79762	165	39999	0	3prime_fragment	FALSE	canonical	0	0	junction_9	13.1142813375343	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCCTGTCCATCTAC	NA	False	NA	11	True	AATAAA	-17	NA	97330590	97376933	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_97330768_97343339_97343564_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362252_97362362_97362442_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
WTC11_00089866	chr9	+	2315	16	NIC	ENSG00000197816.16	novel	7060	37	NA	NA	77	0	intron_retention	FALSE	canonical	0	0	junction_8	12.8436754864019	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCCTGTCCATCTAC	NA	False	NA	11	True	AATAAA	-17	NA	97330609	97376933	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97330768_97343339_97343564_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362442_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
WTC11_00089867	chr9	+	2665	9	NIC	ENSG00000119514.7	novel	2764	10	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_8	55.6314602990071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGATCTTTTTGTACTG	98805455	True	NA	16	True	ATTAAA	-19	NA	98807621	98850081	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_98808070_98823255_98823426_98826751_98826942_98831771_98831958_98835248_98835367_98836971_98837149_98840001_98840134_98844095_98844210_98848951
WTC11_00089868	chr9	+	941	7	FSM	ENSG00000136874.11	ENST00000524405.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	21.2994522621279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGAACACAAGTATATC	99905571	True	NA	NA	False	NA	NA	NA	99906695	99968748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99960104_99960156_99967652_99967740_99968433
WTC11_00089869	chr9	+	618	4	FSM	ENSG00000155827.12	ENST00000466817.1	784	4	166	0	166	0	multi-exon	FALSE	canonical	1	1	junction_1	93.0424037140533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGGCAAGTGTTCG	101529590	False	NA	NA	False	NA	NA	NA	101534144	101540628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101534301_101535397_101535553_101540202_101540371_101540489
WTC11_00089870	chr9	+	3574	24	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	25	-418	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	74.9976433152105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCAATGTCAAAATGGAA	104090600	True	NA	NA	False	NA	NA	NA	104094333	104139233	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_104094485_104095323_104095553_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
WTC11_00089871	chr9	+	4908	1	ISM	ENSG00000070214.16	ENST00000374723.5	9640	16	147817	0	5751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105392427	False	NA	7	True	AATAAA	-21	NA	105392438	105397346	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_105392400_105397300
WTC11_00089873	chr9	+	1690	12	FSM	ENSG00000106692.15	ENST00000448551.6	1700	12	10	0	1	0	multi-exon	TRUE	canonical	1	1	junction_11	14.9958671992603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGTGGATCACTTGA	105556715	True	NA	NA	False	NA	NA	NA	105558141	105640316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105558166_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050_105635149_105640100
WTC11_00089875	chr9	+	523	3	FSM	ENSG00000095209.12	ENST00000434214.1	502	3	-21	0	-18	0	multi-exon	FALSE	canonical	2	3	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCCAGTATGGTGA	105691307	True	NA	NA	False	NA	NA	NA	105694522	105705753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105694773_105702706_105702823_105705596
WTC11_00089877	chr9	+	3980	11	NIC	ENSG00000119318.13	novel	4114	10	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	37.8924794649281	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	107249293	True	NA	12	True	TATAAA	-15	NA	107283195	107332189	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_107283310_107283526_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
WTC11_00089878	chr9	+	8497	11	NIC	ENSG00000157654.19	novel	7507	11	NA	NA	-222	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	24.2561332450166	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	109779885	False	NA	14	True	ATTAAA	-28	NA	109779975	110172512	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_109942685_109943382_110015953_110016040_110136126_110138540_110156318_110156498_110168398
WTC11_00089881	chr9	+	6343	60	NNC	ENSG00000196739.15	novel	7813	61	NA	NA	-5001	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	31.3203095864063	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAAGG	114162695	True	NA	NA	False	NA	NA	NA	114162713	114311528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205809_114206251_114206297_114209674_114209729_114210981_114211027_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231859_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114269240_114269295_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
WTC11_00089882	chr9	+	301	3	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCGAGTCACGGCACCAAA	NA	False	NA	NA	False	NA	NA	NA	118451477	118490925	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118451489_118479884_118479892_118490642
WTC11_00089885	chr9	+	5824	33	ISM	ENSG00000119397.19	ENST00000373855.7	7719	44	43514	0	-3324	0	3prime_fragment	FALSE	canonical	3	8	junction_1	10.3060585943415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	NA	False	NA	13	True	AATAAA	-14	NA	121118468	121177610	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
WTC11_00089889	chr9	+	1383	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	-509	40	-509	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTTTAAATAAAAATCTC	122938645	False	NA	-30	True	TTTAAA	-39	NA	122938910	122940293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122938900_122940300
WTC11_00089891	chr9	+	1140	9	NIC	ENSG00000119408.17	novel	3468	10	NA	NA	-20	-1360	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	95.6856833596333	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTTACAGCAGATGCT	124254757	True	NA	NA	False	NA	NA	NA	124257928	124351078	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_124258086_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
WTC11_00089892	chr9	+	621	1	FSM	ENSG00000167081.18	ENST00000492314.3	607	1	14	-28	14	28	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTGTGTG	125748926	False	NA	45	True	ATTAAA	-45	NA	125748944	125749565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125748900_125749600
WTC11_00089893	chr9	+	2167	17	NNC	ENSG00000136828.19	novel	2362	18	NA	NA	-1	-2	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_11	24.3541577559151	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTCAACAGCAGAGGAT	126913077	True	NA	12	True	AATAAA	-18	NA	126914772	127217342	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210697_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
WTC11_00089894	chr9	+	6250	18	NIC	ENSG00000136828.19	novel	2362	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	15.228138224078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTCAGTTTATTAAAG	126913077	True	NA	58	True	ATTAAA	-17	NA	126914772	127223166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127218739
WTC11_00089897	chr9	+	3892	15	NNC	ENSG00000136895.19	novel	3143	27	NA	NA	-10575	-1721	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_14	19.8376060109303	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGGAGGAATTTTT	NA	False	NA	5	True	AATAAA	-18	NA	127331739	127367397	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_127332350_127333022_127333122_127335229_127335334_127336127_127336237_127338115_127338162_127339644_127339752_127342218_127342335_127344234_127344340_127345402_127345478_127353845_127353945_127354293_127354411_127355296_127355473_127357218_127357378_127365299_127365367_127365494
WTC11_00089900	chr9	+	1229	7	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	0	-120	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	111.773083621336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTCTAGGATCTTTGTC	127394577	True	NA	NA	False	ACTAAA	-18	NA	127397168	127407532	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127407111
WTC11_00089901	chr9	+	3367	25	NIC	ENSG00000148356.15	novel	3130	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	16	junction_10	46.2736426056994	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	127449878	True	NA	5	True	AATAAA	-2	NA	127451507	127503485	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478938_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
WTC11_00089903	chr9	+	1908	2	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	127791455	False	NA	NA	False	NA	NA	NA	127791465	127795726	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_127793147_127795499
WTC11_00089905	chr9	+	536	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-569	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.89915248150105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCTACACTGTTTGA	128150757	True	NA	8	True	AATAAA	-17	NA	128150930	128153455	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128150993_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
WTC11_00089906	chr9	+	573	3	FSM	ENSG00000171159.5	ENST00000489240.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCGGCAGACACGCCT	128152238	True	NA	NA	False	NA	NA	NA	128160358	128163546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128160487_128162003_128162345_128163442
WTC11_00089908	chr9	+	5361	14	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	-1391	0	intron_retention	FALSE	canonical	2	48	junction_4	101.843481257056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGCTGGTTGTGTTCT	128231198	False	NA	27	True	AATAAA	-28	NA	128231244	128255248	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
WTC11_00089910	chr9	+	1962	11	NIC	ENSG00000167123.20	novel	2308	13	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	15.7800506970035	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATATATGTATGTAT	128420162	True	NA	NA	False	AATAAA	-16	NA	128420867	128437344	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431304_128435652_128435906_128436848
WTC11_00089911	chr9	+	259	1	FSM	ENSG00000273186.1	ENST00000610052.1	409	1	103	47	103	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGTTTGTGTTCTCTG	128431603	False	NA	NA	False	NA	NA	NA	128431700	128431959	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128431700_128432000
WTC11_00089912	chr9	+	2074	16	FSM	ENSG00000136811.17	ENST00000448249.8	2069	16	-5	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	28.9694091528748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCATGTGTTTGCACA	128454254	True	NA	5	True	AATAAA	-14	NA	128456151	128494833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
WTC11_00089913	chr9	+	3219	15	FSM	ENSG00000119392.16	ENST00000684314.1	3217	15	-2	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_12	39.4280538268303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATTGCTGATATATTG	128502594	True	NA	15	True	AATAAA	-17	NA	128504694	128542286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128539615_128539699_128540274_128540339_128541101
WTC11_00089914	chr9	+	1374	12	FSM	ENSG00000175287.19	ENST00000353176.9	1374	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	32.487251154927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	128921548	False	NA	11	True	AATAAA	-18	NA	128921591	128942038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
WTC11_00089917	chr9	+	225	1	FSM	ENSG00000268707.1	ENST00000600965.1	507	1	269	13	269	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATTGCCCACCTAGTA	NA	False	NA	NA	False	AATAAA	-7	NA	129170702	129170927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129170700_129170900
WTC11_00089918	chr9	+	1145	4	FSM	ENSG00000233901.7	ENST00000654148.1	1138	4	-7	0	-6	0	multi-exon	FALSE	canonical	2	5	junction_2	10.8012344973464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	129336474	True	NA	24	True	ATTAAA	-29	NA	129336915	129347477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129336989_129338791_129338918_129341349_129342044_129347225
WTC11_00089919	chr9	+	1544	15	NNC	ENSG00000148358.20	novel	6729	18	NA	NA	16	17406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	20.3415980750013	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAATAAAGTTTTGTTG	130050393	True	NA	-1	True	AATAAA	-13	NA	130053940	130108312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130108066
WTC11_00089920	chr9	+	4037	22	NIC	ENSG00000148357.18	novel	15789	98	NA	NA	885	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	6.11381098883963	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTTTCTTTGTCTAA	NA	False	NA	6	True	TATAAA	-18	NA	130399526	130434121	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_130399633_130400782_130400948_130402788_130402897_130403193_130403329_130403740_130403876_130404868_130405060_130405954_130406169_130407570_130407706_130408742_130408934_130410570_130410653_130418771_130419042_130422576_130422727_130424775_130424914_130425008_130425131_130425686_130425925_130427312_130427376_130427496_130427620_130429556_130429686_130430283_130430605_130431366_130431487_130432428_130432556_130433347
WTC11_00089922	chr9	+	4756	26	NIC	ENSG00000050555.19	novel	7455	28	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_9	38.2949813944334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGTGAGGGTGCATGT	131005811	True	NA	15	True	CATAAA	-27	NA	131009148	131092058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
WTC11_00089924	chr9	+	9245	30	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	-163	0	combination_of_known_junctions	TRUE	canonical	3	68	junction_1	77.8824688465038	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	131393861	False	NA	-8	True	NA	NA	NA	131393889	131500171	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
WTC11_00089930	chr9	+	2240	12	ISM	ENSG00000130714.19	ENST00000684062.1	3534	13	2017	-3	9	0	3prime_fragment	FALSE	canonical	3	105	junction_7	15.9663903195027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131510179	False	NA	14	True	ATTAAA	-17	NA	131510191	131523799	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
WTC11_00089932	chr9	+	2112	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	145.055196390891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTCTTGGTTTCTTGGT	133029041	True	NA	23	True	ATTAAA	-12	NA	133030724	133058499	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
WTC11_00089934	chr9	+	685	1	FSM	ENSG00000273473.1	ENST00000608264.1	572	1	-116	3	-116	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCTAGTGTTCCATGCT	134168605	False	NA	NA	False	AATAAA	-28	NA	134168652	134169337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134168700_134169300
WTC11_00089935	chr9	+	5032	5	NIC	ENSG00000196422.11	novel	936	5	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	35.8285849567074	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479557	False	NA	16	True	AATAAA	-16	NA	135479604	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_135479725_135482682_135482816_135483351_135483554_135483949_135484083_135484448
WTC11_00089937	chr9	+	5119	5	NNC	ENSG00000196422.11	novel	4951	4	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	43.4245034513925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479288	True	NA	16	True	AATAAA	-16	NA	135479825	135488892	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_135480023_135482682_135482826_135483351_135483554_135483949_135484083_135484448
WTC11_00089939	chr9	+	6078	1	FSM	ENSG00000196422.11	ENST00000605660.1	4502	1	-1556	-20	154	20	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTTCTTAAAGATAACAC	135482577	False	NA	37	True	AATAAA	-37	NA	135482835	135488913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135482800_135488900
WTC11_00089940	chr9	+	230	1	FSM	ENSG00000196366.3	ENST00000354376.3	2572	1	52	2290	52	-2290	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTGGAGGGCAGGCGG	136483495	True	NA	NA	False	NA	NA	NA	136483546	136483776	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136483500_136483800
WTC11_00089941	chr9	+	3359	2	NNC	ENSG00000237886.1	novel	738	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	28	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGAGGAGGCTGGGG	136545504	True	NA	NA	False	NA	NA	NA	136546211	136549893	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136548809_136549131
WTC11_00089943	chr9	+	575	2	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACGGGGAATTCTGCT	136550952	False	NA	NA	False	AATGAA	-33	NA	136550962	136552110	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_136551198_136551770
WTC11_00089945	chr9	+	671	2	NIC	ENSG00000273066.5	novel	1900	5	NA	NA	1804	-18	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAGCTGATTTTAA	136800292	False	NA	-3	True	AATAAA	-18	NA	136807985	136810017	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136808327_136809687
WTC11_00089946	chr9	+	985	5	FSM	ENSG00000054148.18	ENST00000371661.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1567.12555336195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136848703	False	NA	4	True	ATTAAA	-13	NA	136848723	136851022	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136848781_136849110_136849591_136850012_136850138_136850505_136850561_136850754
WTC11_00089947	chr9	+	1610	6	NIC	ENSG00000177943.14	novel	3895	29	NA	NA	1164	0	intron_retention	FALSE	canonical	3	18	junction_4	7.33212111192934	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCCAGGGTGAAGTCA	136858012	False	NA	14	True	AATAAA	-25	NA	136858168	136860797	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136858277_136858399_136858547_136858718_136858854_136859004_136859133_136859208_136860065_136860561
WTC11_00089949	chr9	+	2803	14	NNC	ENSG00000127191.18	novel	680	6	NA	NA	533	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	130.808500890903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136887037	False	NA	12	True	ATTAAA	-14	NA	136887048	136926607	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136887257_136889468_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
WTC11_00089950	chr9	+	2930	12	NIC	ENSG00000127191.18	novel	680	6	NA	NA	-294	0	intron_retention	FALSE	canonical	3	39	junction_2	106.208511588687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136889229	False	NA	12	True	ATTAAA	-14	NA	136889240	136926607	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
WTC11_00089952	chr9	+	1049	5	NNC	ENSG00000148362.11	novel	808	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	152.101117681627	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988545	True	NA	23	True	AATAAA	-18	NA	136992441	136993976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136992975_136993092_136993244_136993342_136993412_136993579_136993665_136993765
WTC11_00089954	chr9	+	2606	13	NIC	ENSG00000177239.16	novel	2707	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	85.4900903938904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	137082192	True	NA	-18	True	NA	NA	NA	137086975	137109157	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137087219_137088074_137088184_137088952_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
WTC11_00089956	chr9	+	610	5	FSM	ENSG00000176884.16	ENST00000460273.1	844	5	0	234	0	-234	multi-exon	TRUE	canonical	2	4	junction_2	5.85234995535981	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCAGGCCACCCTCCG	137162629	False	NA	NA	False	NA	NA	NA	137162705	137163904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137162740_137162845_137163004_137163168_137163331_137163558_137163669_137163758
WTC11_00089958	chr9	+	2304	13	NIC	ENSG00000188566.15	novel	4817	14	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	36.0049186454666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTACTTCTAGCGCAG	137200440	True	NA	23	True	AGTAAA	-13	NA	137205750	137217001	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
WTC11_00089959	chr9	+	4113	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	133.412287290189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	137604844	True	NA	7	True	AATAAA	-18	NA	137619022	137835741	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00089962	chr9	+	5147	26	NIC	ENSG00000181090.21	novel	4208	24	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.034438456929	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137680690	True	NA	15	True	AATAAA	-20	NA	137680747	137836127	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137680923_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
WTC11_00089964	chr9	+	9112	43	NIC	ENSG00000148408.14	novel	9758	46	NA	NA	1131	-2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	10.1202800369956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACCATGCTGCCATT	137877460	False	NA	NA	False	AATAAA	-25	NA	137879064	138124617	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137879160_137882743_137882884_137913179_137913272_137914653_137914807_137917240_137917432_137952273_137952378_137955697_137955814_137956770_137956828_137957597_137957688_137971382_137971593_137975906_137976020_137984137_137984251_137986412_137986545_137986781_137986855_138006766_138006885_138010009_138010078_138013128_138013236_138023010_138023812_138024954_138025173_138043773_138043901_138046903_138047034_138047398_138047459_138049208_138049316_138052091_138052189_138053845_138054007_138057731_138057870_138058048_138058251_138058568_138058734_138059078_138059190_138059653_138059738_138073487_138073605_138074000_138074067_138075818_138075911_138078113_138078259_138105698_138105808_138112397_138112506_138114377_138114491_138115551_138115680_138117945_138118082_138118651_138118769_138120164_138120373_138120630_138120882_138121468
WTC11_00089965	chr9	+	2406	5	NNC	ENSG00000159247.13	novel	1735	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	25.4791581493581	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150024	False	NA	25	True	AATAAA	-15	NA	138150080	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_138150309_138174141_138174873_138175362_138175472_138175600_138175712_138176206
WTC11_00089966	chr9	+	3063	5	NNC	ENSG00000159247.13	novel	1735	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	37.7259857392753	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149458	True	NA	25	True	AATAAA	-15	NA	138150112	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_138150309_138157371_138157470_138174045_138174873_138175362_138175472_138175600
WTC11_00089967	chr9	+	2553	4	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	46	0	intron_retention	FALSE	canonical	3	45	junction_3	21.3124898175277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149504	True	NA	25	True	AATAAA	-15	NA	138150158	138177433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_138150309_138174045_138174873_138175362_138175712_138176206
WTC11_00089968	chr9	+	1386	9	NNC	ENSG00000233013.10	novel	1795	9	NA	NA	9767	19973	intron_retention	FALSE	canonical	0	0	junction_2	34.9282747212055	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCATCTTGCTCATTC	NA	False	NA	NA	False	NA	NA	NA	138230910	138273190	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_138231104_138243619_138243730_138249314_138249381_138251537_138251597_138252688_138253218_138261650_138261716_138268406_138268551_138270969_138271094_138273094
WTC11_00089969	chr9	-	2094	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	4732	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	83.788681872175	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	37	True	AATAAA	-21	NA	25007	14474	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16422_16717_16877_16968_17167_17343_17480_17718_17856_18027_18175_18380_18493_24850
WTC11_00089970	chr9	-	1699	10	ISM	ENSG00000181404.17	ENST00000442898.5	1873	11	4732	39	4732	-39	3prime_fragment	FALSE	canonical	3	9	junction_4	88.8269228456228	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGCTTTTAATAAAG	NA	False	NA	-2	True	AATAAA	-18	NA	25007	14513	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_14941_15080_15150_15908_16062_16717_16877_16964_17167_17343_17480_17718_17856_18027_18175_18380_18493_24850
WTC11_00089972	chr9	-	1303	5	NNC	ENSG00000236404.12	novel	806	4	NA	NA	-444	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	38.4967531098403	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621833	False	NA	0	True	AATAAA	-25	NA	2621865	2535651	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2593739_2593793_2621228
WTC11_00089974	chr9	-	8870	15	ISM	ENSG00000080298.16	ENST00000382004.7	9307	18	179227	0	8	0	3prime_fragment	FALSE	canonical	3	12	junction_2	2.54048846339696	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	3346756	3218296	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666
WTC11_00089976	chr9	-	368	3	FSM	ENSG00000106686.17	ENST00000485981.5	488	3	120	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATTCATGCTCATC	-4666161	False	NA	NA	False	NA	NA	NA	4666316	4635274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4635400_4661898_4662037_4666211
WTC11_00089978	chr9	-	370	2	NNC	ENSG00000107014.9	novel	733	3	NA	NA	190	-245	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTGCTAGATTTTGC	NA	False	NA	-1	True	AATAAA	-26	NA	5304242	5300120	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_5300445_5304196
WTC11_00089983	chr9	-	1274	1	FSM	ENSG00000231381.2	ENST00000442955.2	1010	1	-357	93	-357	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTTTCTTTGGAATT	NA	False	NA	NA	False	ATTAAA	-2	NA	6670365	6669091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6669100_6670400
WTC11_00089984	chr9	-	687	3	NNC	ENSG00000137038.8	novel	458	3	NA	NA	-24	54103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTCATATGT	-7788912	True	NA	NA	False	CATAAA	-45	NA	7799802	7742396	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742436_7798343_7798638_7799448
WTC11_00089986	chr9	-	9457	33	NNC	ENSG00000153707.19	novel	10389	46	NA	NA	114	57976	intron_retention	FALSE	non_canonical	0	0	junction_1	12.9276834738479	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCTGAGGAGGGAGGAT	-8857624	False	NA	NA	False	NA	NA	NA	8857662	8256269	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_8256295_8314245_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485328_8485761_8486350_8492861_8492980_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
WTC11_00089987	chr9	-	596	1	FSM	ENSG00000214121.4	ENST00000449329.2	596	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGTTTTAGTGC	NA	False	NA	NA	False	NA	NA	NA	12973438	12972842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_12972800_12973400
WTC11_00089988	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.10327780786685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	-14313901	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
WTC11_00089989	chr9	-	2227	2	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGCCATCCTAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	14610042	14604514	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_14606549_14609849
WTC11_00089990	chr9	-	3367	17	Fusion	ENSG00000164985.15_ENSG00000251834.1	novel	3342	16	NA	NA	0	16	multi-exon	FALSE	non_canonical	0	0	junction_1	677.747141270253	139	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTTTAATACAGACTTT	-15477266	True	NA	NA	False	AAAAAG	-2	NA	15510970	15431882	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_15431908_15464065_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
WTC11_00089991	chr9	-	7172	6	NNC	ENSG00000173068.18	novel	12808	7	NA	NA	0	-4018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.2282830205365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTCATTCGGCAAT	-16727985	False	NA	NA	False	NA	NA	NA	16727997	16413520	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_16414938_16416404_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796
WTC11_00089994	chr9	-	4960	3	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	0	5607	multi-exon	TRUE	canonical	1	1	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAACCACTGAGTTTTTG	-21332357	True	NA	-8	True	AATAAA	-11	NA	21335404	21324057	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_21324322_21329330_21329416_21330793
WTC11_00089998	chr9	-	3207	11	ISM	ENSG00000147894.17	ENST00000673600.1	2318	12	25	10914	12	1	5prime_fragment	FALSE	canonical	3	9	junction_1	60.5297447541289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTTGCCTCTTTCAGT	-27571775	True	NA	-10	True	AATAAA	-9	NA	27573469	27546553	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_27548419_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
WTC11_00089999	chr9	-	3307	7	NNC	ENSG00000174482.10	novel	3044	6	NA	NA	-542028	-3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	2.47767812455308	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATATTTTTTATAC	-29211928	True	NA	-6	True	AATAAA	-24	NA	29212314	27948080	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_27950707_28295207_28295367_28372835_28372869_28475939_28476026_28670199_28670281_28947817_28947915_29212089
WTC11_00090000	chr9	-	3032	19	NIC	ENSG00000288684.1	novel	4906	20	NA	NA	89	-1627	combination_of_known_junctions	FALSE	canonical	3	11	junction_17	47.3191162790695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCAGTTTGTACTAT	-32550231	False	NA	-2	True	AATATA	-14	NA	32552479	32457002	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32550773_32550969_32552433
WTC11_00090001	chr9	-	3522	8	NIC	ENSG00000137074.20	novel	1938	8	NA	NA	0	142	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	141.232042383867	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTTATTTTCTCTGA	-33024052	True	NA	NA	False	NA	NA	NA	33025102	32971307	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33024803
WTC11_00090002	chr9	-	1849	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	-3	0	0	multi-exon	FALSE	canonical	2	10	junction_6	145.419699108783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-33024068	True	NA	-9	True	AATAAA	-14	NA	33025118	32972615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
WTC11_00090004	chr9	-	1082	8	NIC	ENSG00000137074.20	novel	2022	8	NA	NA	6	6	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	119.329931924313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTTCACAAATTTATT	-32997686	True	NA	-21	True	ATTAAA	-7	NA	33001571	32973389	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001515
WTC11_00090005	chr9	-	377	1	FSM	ENSG00000225693.1	ENST00000425356.1	484	1	63	44	63	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCCCCCAGTTTCCCG	-33019052	False	NA	NA	False	NA	NA	NA	33020102	33019725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33019700_33020100
WTC11_00090006	chr9	-	4068	5	NIC	ENSG00000086062.13	novel	4176	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	22.4833271559171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGTGGTTTCTGTTTG	-33165856	True	NA	-5	True	AATAAA	-18	NA	33167351	33110641	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_33113587_33113773_33113879_33120418_33120607_33135188_33135425_33166757
WTC11_00090008	chr9	-	274	1	FSM	ENSG00000204982.3	ENST00000453323.1	162	1	126	-238	126	238	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCAGAGCTAGTGAGAAA	NA	False	NA	NA	False	CATAAA	-24	NA	33613883	33613609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33613600_33613900
WTC11_00090010	chr9	-	325	1	FSM	ENSG00000238886.1	ENST00000459386.1	82	1	63	-306	63	306	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGTTTGGATGTGTTT	-33952773	False	NA	NA	False	NA	NA	NA	33952787	33952462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33952500_33952800
WTC11_00090011	chr9	-	654	1	FSM	ENSG00000233668.1	ENST00000372214.3	645	1	43	-52	43	52	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCCAAAAAACAA	-34200770	False	NA	NA	False	AATGAA	-22	NA	34224585	34223931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34223900_34224600
WTC11_00090012	chr9	-	250	2	FSM	ENSG00000164972.14	ENST00000481295.5	293	2	43	0	43	0	multi-exon	FALSE	canonical	3	32	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34379578	False	NA	2	True	AATAAA	-20	NA	34379732	34379018	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34379182_34379645
WTC11_00090013	chr9	-	653	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	792	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34380585	False	NA	2	True	AATAAA	-20	NA	34380739	34379018	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_34379182_34379645_34379733_34380336
WTC11_00090016	chr9	-	4200	17	FSM	ENSG00000165280.18	ENST00000678650.1	4362	17	0	162	0	-162	multi-exon	FALSE	canonical	2	4	junction_16	696.390826758761	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTCACTATGCTTGG	-35031114	True	NA	NA	False	TATAAA	-1	NA	35072561	35055537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068355_35072336
WTC11_00090021	chr9	-	2345	15	NNC	ENSG00000221829.10	novel	2556	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	87.1335182349479	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077051	False	NA	-40	True	AGTAAA	-13	NA	35079929	35073838	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35074217_35074373_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
WTC11_00090023	chr9	-	4046	11	NIC	ENSG00000165282.14	novel	2588	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_10	34.124624540059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTGTCTGAGATG	-35096244	False	NA	NA	False	AATAAA	-11	NA	35096254	35088692	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878
WTC11_00090024	chr9	-	3233	9	NIC	ENSG00000005238.20	novel	3256	9	NA	NA	-105	0	intron_retention	FALSE	canonical	3	17	junction_2	4.62162038683404	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	-35115518	True	NA	-9	True	AATAAA	-21	NA	35115967	35104120	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
WTC11_00090025	chr9	-	615	2	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCACACAAAGCCTGTC	-35156352	False	102	-13	True	ATTAAA	-9	NA	35156384	35151273	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_35151600_35156095
WTC11_00090027	chr9	-	1294	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1213	-197	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	9.51606828241347	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCAGTCTGCTGCCTGCT	-35617130	False	NA	NA	False	NA	NA	NA	35617140	35610181	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616387_35616599_35616690_35616913
WTC11_00090028	chr9	-	1555	9	NNC	ENSG00000137135.18	novel	3678	9	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	83.9507854340863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAAATGTGGCTATTT	-35662367	True	NA	-28	True	NA	NA	NA	35665181	35661528	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35662003_35662178_35662345_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00090030	chr9	-	1355	8	NIC	ENSG00000137135.18	novel	3678	9	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	84.6568101820762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAAATGTGGCTATTT	-35662373	True	NA	-28	True	NA	NA	NA	35665187	35661528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35662003_35662178_35662268_35662511_35662742_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
WTC11_00090031	chr9	-	1078	10	NIC	ENSG00000198467.16	novel	1182	9	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	3	109	junction_4	187.958033140971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGCCCTTTAATCCTTT	-35676434	True	NA	-19	True	AATAAA	-19	NA	35689895	35682011	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
WTC11_00090033	chr9	-	3604	17	NNC	ENSG00000070610.14	novel	3611	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	126.079696397755	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAAGTGTGGTGTGTTTG	-35744769	True	NA	-6	True	AATAAA	-14	NA	35749228	35736867	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741060_35741671_35741891_35744296_35744413_35744614_35744707_35748345
WTC11_00090035	chr9	-	1089	2	Genic_Genomic	ENSG00000213866.3	novel	975	1	NA	NA	0	416	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCTACAAGGAAAATTATA	NA	False	NA	NA	False	AATAAA	-30	NA	35972318	35970927	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_35971657_35971958
WTC11_00090037	chr9	-	5084	11	NIC	ENSG00000137075.18	novel	5061	12	NA	NA	-105	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	46.7486898212132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCATGTC	-36484002	True	NA	-5	True	AATAAA	-21	NA	36487653	36336399	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36487307
WTC11_00090041	chr9	-	741	3	NNC	ENSG00000175768.13	novel	706	2	NA	NA	0	32482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2490	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACGACAAAAAAAGAAAACTG	-37583574	True	NA	NA	False	NA	NA	NA	37592596	37550163	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_37550200_37588412_37588933_37592411
WTC11_00090042	chr9	-	440	1	FSM	ENSG00000233111.1	ENST00000409159.2	606	1	-9	175	-9	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCTTCTTGGAGACGA	NA	False	NA	NA	False	NA	NA	NA	37637302	37636862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37636900_37637300
WTC11_00090043	chr9	-	4852	18	FSM	ENSG00000106714.18	ENST00000358144.6	4885	18	0	33	0	-33	multi-exon	FALSE	canonical	3	9	junction_8	7.25082026143717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATCTTTGTTTCCTTC	NA	False	NA	NA	False	AAAAAG	-18	NA	39239174	39085009	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133136_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992
WTC11_00090044	chr9	-	2473	14	FSM	ENSG00000106714.18	ENST00000377659.1	2649	14	0	176	0	-176	multi-exon	FALSE	canonical	3	13	junction_2	7.19385010199273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTCCACATGATTTCC	NA	False	NA	NA	False	AATGAA	-3	NA	39288303	39118102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39118260_39132931_39133133_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992_39239187_39266895_39267007_39287979
WTC11_00090045	chr9	-	1322	7	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	12.8765506078125	309	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAGGTTGACAACATG	-40584317	False	16	NA	False	AATAAA	-13	NA	40584327	40571628	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_40572047_40572388_40572537_40573450_40573574_40574978_40575160_40578183_40578356_40578998_40579069_40584117
WTC11_00090046	chr9	-	1813	16	FSM	ENSG00000215126.11	ENST00000494538.6	1813	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	436.900883750791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	41189301	41131355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41161600_41161724_41162332_41162378_41166783_41166831_41170283_41170424_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
WTC11_00090048	chr9	-	439	2	FSM	ENSG00000235659.1	ENST00000377547.3	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGCTCTACTGACAG	NA	False	NA	NA	False	NA	NA	NA	61866965	61865754	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_61866078_61866849
WTC11_00090049	chr9	-	1536	3	FSM	ENSG00000204802.3	ENST00000429818.1	1480	3	-56	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	62376836	62374461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62375529_62376252_62376383_62376497
WTC11_00090050	chr9	-	785	2	FSM	ENSG00000204802.3	ENST00000430302.1	781	2	0	-4	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62376836	62375327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62375529_62376252
WTC11_00090051	chr9	-	1291	7	NNC	ENSG00000204778.4	novel	655	9	NA	NA	8312	486	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	684.202374220441	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTGTAAAGTTACTCTT	NA	False	NA	NA	False	NA	NA	NA	65314703	65287427	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65314374
WTC11_00090052	chr9	-	739	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16429	97	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	732.003715837563	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGTATACTTTAAAAT	-65306415	True	NA	NA	False	NA	NA	NA	65306586	65287816	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306363
WTC11_00090053	chr9	-	706	3	FSM	ENSG00000274628.5	ENST00000617589.1	768	3	62	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGTTGCTGTTGA	NA	False	NA	NA	False	NA	NA	NA	66050845	66047112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_66047388_66049861_66050024_66050576
WTC11_00090055	chr9	-	213	1	FSM	ENSG00000278763.1	ENST00000610601.1	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGGACAAGCCACCCT	-67725891	False	NA	NA	False	NA	NA	NA	67725902	67725689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_67725700_67725900
WTC11_00090056	chr9	-	6090	24	NNC	ENSG00000135048.14	novel	6152	24	NA	NA	-953	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	29.3156990013799	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-71769302	True	NA	-11	True	AATAAA	-22	NA	71769466	71683365	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71769371
WTC11_00090057	chr9	-	682	1	FSM	ENSG00000224820.2	ENST00000418852.2	495	1	81	-268	81	268	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	72108231	72107549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72107500_72108200
WTC11_00090058	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	256.153220206622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	-72364603	False	NA	29	True	NA	NA	NA	72364626	72355832	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
WTC11_00090061	chr9	-	7434	11	FSM	ENSG00000106772.19	ENST00000426088.5	7434	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.2878569196893	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTTGTCCCTTAGACT	NA	False	NA	NA	False	AAGAAA	-42	NA	76710237	76614288	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644910_76652482_76652684_76655422_76655503_76703336_76704100_76704760
WTC11_00090063	chr9	-	1217	5	NNC	ENSG00000156049.7	novel	694	4	NA	NA	-3164	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.5305272373113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTTACCAAGATCAGAAT	NA	False	NA	NA	False	NA	NA	NA	77434852	77424127	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_77424170_77425561_77425735_77431320_77431723_77432511_77432627_77434367
WTC11_00090064	chr9	-	2425	5	NIC	ENSG00000196781.16	novel	936	9	NA	NA	-51	0	combination_of_known_splicesites	TRUE	canonical	3	22	junction_1	349.15997408065	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	-81676781	True	NA	-2	True	AATAAA	-18	NA	81689598	81633468	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81634302_81685675_81685721_81685832_81685897_81687333_81687435_81688216
WTC11_00090066	chr9	-	1183	5	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141396	2628	multi-exon	FALSE	canonical	1	2	junction_1	33.7518518010494	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGTCCAAATTTCCT	-82885808	True	NA	NA	False	NA	NA	NA	82886188	82741438	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_82742284_82744302_82744445_82782325_82782383_82831037_82831127_82886138
WTC11_00090067	chr9	-	2232	3	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141396	1715	multi-exon	FALSE	canonical	3	80	junction_1	6	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGTTGTGTGTTAAAA	-82885808	True	NA	NA	False	ATTAAA	-14	NA	82886188	82742351	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_82744445_82831037_82831127_82886138
WTC11_00090068	chr9	-	5573	16	NIC	ENSG00000165105.10	novel	5585	17	NA	NA	-26	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	7.31209044437134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTTTGAGTGTTTCCT	-83062933	False	NA	-9	True	AATAAA	-13	NA	83063203	82979593	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_82982783_82990390_82990468_82992905_82993026_82997011_82997127_82998364_82998447_83000168_83000317_83000432_83000571_83000895_83001131_83004497_83004587_83005415_83005501_83009640_83009757_83012433_83012512_83015804_83015901_83022335_83022427_83025774_83025922_83062436
WTC11_00090069	chr9	-	6070	9	FSM	ENSG00000135018.14	ENST00000533705.5	6055	9	0	-15	0	12	multi-exon	FALSE	canonical	3	335	junction_3	290.191639266193	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCTTTTGTAGAAAGAA	-83686032	True	NA	6	True	AATAAA	-28	NA	83686053	83659955	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003
WTC11_00090070	chr9	-	2029	17	NNC	ENSG00000165119.21	novel	2889	17	NA	NA	0	97385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2237.02489020015	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCAGCATACTTAATGG	-83978437	False	4887	NA	False	AAAAAG	-10	NA	83978452	83870697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_83870729_83968910_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
WTC11_00090071	chr9	-	1050	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	0	-20835	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGTTACTTAATGG	-83920674	True	NA	NA	False	AATAAA	-18	NA	83921432	83919530	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_83919814_83920105_83920213_83920772
WTC11_00090072	chr9	-	2880	17	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5662	junction_16	1138.91447769356	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963580	True	NA	-4	True	AATATA	-14	NA	83980616	83968082	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
WTC11_00090073	chr9	-	4423	25	NIC	ENSG00000135049.16	novel	4464	26	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	52.9585136372488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTTGTCATCTTCT	-85738048	True	NA	-5	True	AATAAA	-18	NA	85741953	85546540	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
WTC11_00090075	chr9	-	697	2	FSM	ENSG00000135052.16	ENST00000464314.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGCAGGAAGCTGCC	-86036749	False	NA	NA	False	NA	NA	NA	86036813	86035394	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86035626_86036347
WTC11_00090076	chr9	-	625	2	FSM	ENSG00000083223.18	ENST00000469004.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAGAAATGGGAAAT	-86324635	False	NA	NA	False	NA	NA	NA	86324653	86323627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86323961_86324361
WTC11_00090077	chr9	-	1210	5	NNC	ENSG00000288903.1	novel	2082	4	NA	NA	121	-39669	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2.69258240356725	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATCTTCAGATTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	87277191	87259539	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_87260058_87261053_87261271_87265429_87265493_87276642_87277021_87277157
WTC11_00090078	chr9	-	352	2	NNC	ENSG00000289166.1	novel	296	2	NA	NA	1197	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTCTCCTCTTCCT	-87385414	False	NA	-2	True	AATAAA	-16	NA	87385432	87384845	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_87385077_87385311
WTC11_00090079	chr9	-	1458	5	NNC	ENSG00000224945.1	novel	585	3	NA	NA	-68870	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	19.8037243971936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTATGTCCATGGAGT	-89177915	True	NA	-2	True	ATTAAA	-21	NA	89178804	89088604	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_89088936_89109047_89109129_89109479_89109637_89112555_89112627_89177986
WTC11_00090080	chr9	-	503	4	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	7.1336448530109	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATTGATTTTGTGGT	-89310685	True	NA	-7	True	AATAAA	-12	NA	89310952	89181579	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_89181767_89288486_89288618_89308857_89308947_89310856
WTC11_00090081	chr9	-	3923	20	FSM	ENSG00000187764.12	ENST00000420987.5	4275	20	0	352	0	-352	multi-exon	FALSE	canonical	1	1	junction_4	73.9245703759119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCATCCAGCCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	89455953	89361142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832_89377052_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89418362_89418438_89455887
WTC11_00090082	chr9	-	3375	4	FSM	ENSG00000187764.12	ENST00000469653.5	3533	4	158	0	158	0	multi-exon	FALSE	canonical	0	0	junction_3	9.2736184954957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTCTCATGAGTGTTT	-89369342	False	NA	-2	True	ATTAAA	-15	NA	89369361	89361600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429_89363528_89363740_89363951_89367122
WTC11_00090085	chr9	-	5462	19	NIC	ENSG00000187764.12	novel	3594	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	63.1304987826265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAGTGGAGAAGCCTGG	-89496139	True	NA	NA	False	NA	NA	NA	89498113	89362238	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89455887_89455954_89497918
WTC11_00090086	chr9	-	4600	17	NIC	ENSG00000187764.12	novel	4824	18	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_15	42.5947014750661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-89496114	True	NA	0	True	AATAAA	-21	NA	89498088	89377234	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89455887_89455954_89497918
WTC11_00090090	chr9	-	2807	10	ISM	ENSG00000198000.12	ENST00000360868.7	4341	17	12218	-256	-1617	0	3prime_fragment	FALSE	canonical	3	157	junction_9	22.5591130199508	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	NA	False	NA	-1	True	GATAAA	-24	NA	92312442	92297357	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145
WTC11_00090092	chr9	-	2915	2	FSM	ENSG00000288062.1	ENST00000655112.1	2920	2	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTTACAAAATAAAAATA	-92809153	False	NA	-50	True	NA	NA	NA	92809166	92805430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92808088_92808908
WTC11_00090093	chr9	-	1817	1	FSM	ENSG00000275318.1	ENST00000617319.1	734	1	-177	-906	-177	906	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGACTGAGTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	92841865	92840048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92840000_92841900
WTC11_00090094	chr9	-	2255	3	NNC	ENSG00000204352.4	novel	467	3	NA	NA	-123	1668	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	53	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTAAAATGAAGTAAAGAG	-93346218	False	NA	10	True	AATAAA	-31	NA	93346275	93333705	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93335661_93335875_93335974_93346073
WTC11_00090095	chr9	-	1465	4	NNC	ENSG00000204352.4	novel	1154	5	NA	NA	-296	846	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	47.0177271533479	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACTGTGTGTCCCTGA	-93346653	False	NA	NA	False	AATACA	-17	NA	93346710	93334527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93335661_93335875_93335974_93346073_93346217_93346619
WTC11_00090096	chr9	-	368	1	FSM	ENSG00000288023.1	ENST00000662818.1	705	1	142	195	142	-195	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTCCCTCATGGGGA	-94726404	False	NA	NA	False	NA	NA	NA	94726433	94726065	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94726100_94726400
WTC11_00090097	chr9	-	4258	14	NIC	ENSG00000158169.13	novel	4592	15	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	13.7552571983121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTAATGTTGTATCCA	-95316478	False	416	-9	True	AATAAA	-10	NA	95316894	95099062	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_95101851_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95316831
WTC11_00090098	chr9	-	576	2	FSM	ENSG00000185920.18	ENST00000549678.1	578	2	2	0	2	0	multi-exon	FALSE	canonical	3	26	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCTTTCTACAACATG	-95469168	False	NA	NA	False	NA	NA	NA	95469187	95467286	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95467426_95468750
WTC11_00090099	chr9	-	1037	7	FSM	ENSG00000185920.18	ENST00000553011.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	11.0415880500346	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTCATGGCTTATCCAG	-95507187	False	NA	NA	False	NA	NA	NA	95507199	95480060	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95506406_95506600_95506936
WTC11_00090101	chr9	-	1442	11	NIC	ENSG00000130958.13	novel	1623	12	NA	NA	84	4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	29.488302765673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCATCATGTGATATTA	-96382264	True	NA	-6	True	AATAAA	-17	NA	96383594	96320705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96321342_96321997_96322081_96324090_96324170_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
WTC11_00090102	chr9	-	1210	7	NIC	ENSG00000130958.13	novel	1623	12	NA	NA	-10	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	36.7559518989782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCATCATGTGATATTA	-96382369	True	NA	-6	True	AATAAA	-17	NA	96383699	96320705	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96321342_96321997_96322081_96324090_96324170_96360153_96360222_96364463_96364551_96368271_96368306_96383476
WTC11_00090104	chr9	-	1905	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	-51	-1200	-51	1200	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	-96417336	False	1127	NA	False	NA	NA	NA	96417428	96415523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96415500_96417400
WTC11_00090105	chr9	-	4064	5	FSM	ENSG00000196597.13	ENST00000478850.5	932	5	0	-3132	0	-7	multi-exon	FALSE	canonical	2	12	junction_1	5.71729831301464	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAATATCTGATACCAC	-96853465	True	NA	NA	False	NA	NA	NA	96854360	96816275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96854087
WTC11_00090106	chr9	-	1516	6	ISM	ENSG00000196312.15	ENST00000645073.1	1246	8	3	30229	3	309	5prime_fragment	FALSE	canonical	3	47	junction_2	105.165393547497	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCAGGAGATTGAGAGCA	-97008075	True	NA	NA	False	NA	NA	NA	97013634	96933212	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852_96972949_97013258
WTC11_00090107	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	49.8029450267083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033175	True	NA	NA	False	AATAAA	-19	NA	97039174	97032654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
WTC11_00090110	chr9	-	2207	3	Genic_Genomic	ENSG00000228038.1	novel	945	1	NA	NA	-3913	970	multi-exon	FALSE	canonical	1	1	junction_2	7	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAACCTATATACTTA	NA	False	NA	-15	True	ATTAAA	-23	NA	97098551	97092723	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_97094770_97095121_97095257_97098525
WTC11_00090111	chr9	-	814	5	FSM	ENSG00000106785.15	ENST00000478401.1	814	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	35.3509193656968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCGCCGAGTGACCAA	-98119122	False	NA	NA	False	NA	NA	NA	98119136	98094866	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98095030_98099930_98100165_98109888_98109985_98110068_98110235_98118981
WTC11_00090112	chr9	-	4151	7	FSM	ENSG00000095383.20	ENST00000375063.5	2100	7	-1939	-112	-1939	97	multi-exon	FALSE	canonical	3	43	junction_6	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTCTGCAGGGCCAGC	NA	False	NA	99	True	NA	NA	NA	98215489	98198913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107
WTC11_00090113	chr9	-	2908	15	NNC	ENSG00000165138.18	novel	7190	15	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	155.8852436367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792520	True	NA	-3	True	AATAAA	-23	NA	98796501	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98732554_98736281_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00090114	chr9	-	2667	15	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	104	junction_5	144.830865466712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792524	True	NA	-3	True	AATAAA	-23	NA	98796505	98732008	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
WTC11_00090116	chr9	-	1117	3	FSM	ENSG00000255145.3	ENST00000657190.1	1621	3	0	504	0	-504	multi-exon	FALSE	canonical	1	1	junction_1	10.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGCGATTCCTCAAGG	NA	False	NA	NA	False	NA	NA	NA	99894996	99881006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99881986_99886674_99886696_99894879
WTC11_00090117	chr9	-	1032	3	NNC	ENSG00000136897.8	novel	3336	2	NA	NA	0	35676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGGCTTCATTGCAAAA	-101388607	True	NA	NA	False	NA	NA	NA	101398618	101351956	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_101351987_101389966_101390851_101398500
WTC11_00090118	chr9	-	8352	37	ISM	ENSG00000165029.17	ENST00000374736.8	10408	50	97068	14	-98	-13	3prime_fragment	FALSE	canonical	2	5	junction_14	4.2370900508209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTGGTCTACAGAAATT	NA	False	NA	-15	True	AATAAA	-12	NA	104831087	104781019	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_104784456_104785395_104785640_104786297_104786391_104786872_104786977_104787919_104788055_104788425_104788568_104790921_104791029_104791935_104791999_104792785_104792907_104793170_104793301_104794386_104794511_104796052_104796198_104796308_104796425_104798420_104798599_104799818_104799989_104800509_104800585_104802053_104802160_104803283_104803317_104804625_104804721_104806240_104806431_104809465_104809565_104810799_104810925_104812573_104812723_104814117_104814232_104814426_104814476_104816142_104816346_104817331_104817405_104818662_104818884_104819585_104819724_104819926_104820070_104821374_104821507_104822495_104822668_104824464_104824579_104825682_104825888_104826947_104827170_104828915_104829139_104830924
WTC11_00090119	chr9	-	715	4	FSM	ENSG00000165029.17	ENST00000494467.1	807	4	0	92	0	-92	multi-exon	FALSE	canonical	2	8	junction_1	0.942809041582063	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACTGCTTTGGGCATCT	NA	False	NA	NA	False	NA	NA	NA	104830989	104825682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104825888_104826947_104827170_104828915_104829139_104830924
WTC11_00090120	chr9	-	8087	34	FSM	ENSG00000070061.16	ENST00000676429.1	10045	34	2692	-734	-286	94	multi-exon	FALSE	canonical	3	143	junction_28	29.2641934985452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGACTCTGTCTCAA	-108931410	False	NA	NA	False	NA	NA	NA	108931432	108866803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996
WTC11_00090121	chr9	-	7992	35	FSM	ENSG00000070061.16	ENST00000675748.1	7210	35	-48	-734	0	94	multi-exon	FALSE	canonical	3	60	junction_34	36.1112396117549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGACTCTGTCTCAA	-108934122	False	NA	NA	False	NA	NA	NA	108934144	108866803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
WTC11_00090122	chr9	-	7426	35	FSM	ENSG00000070061.16	ENST00000676121.1	7404	35	0	-22	0	0	multi-exon	FALSE	canonical	3	108	junction_34	31.8920242548613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGAATTTTCCTGGACA	-108934123	False	NA	NA	False	AGTAAA	-17	NA	108934145	108867515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00090123	chr9	-	5421	37	NNC	ENSG00000070061.16	novel	5913	37	NA	NA	42	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	43.7762619590927	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAGACCTTTCTTACTG	-108934264	False	NA	-7	True	ATTAAA	-25	NA	108934286	108868167	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911012_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
WTC11_00090124	chr9	-	2469	19	NNC	ENSG00000119326.15	novel	2522	19	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	149.633925726738	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATTGTAGTGTGATTT	-109005387	True	NA	-6	True	AATAAA	-20	NA	109013518	108942574	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_108942829_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
WTC11_00090125	chr9	-	3694	16	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	39	-346	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	71.3332087226326	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTGTATTAGTGT	-109115757	False	NA	NA	False	NA	NA	NA	109119908	109019271	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
WTC11_00090126	chr9	-	7595	13	NIC	ENSG00000119314.16	novel	3413	15	NA	NA	0	-64	combination_of_known_splicesites	FALSE	canonical	3	52	junction_11	61.7123141862483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGGCTTACCTGTAAA	-112319717	False	NA	NA	False	AATAGA	-24	NA	112333546	112217779	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297840_112297917_112333469
WTC11_00090127	chr9	-	290	1	FSM	ENSG00000242256.3	ENST00000493687.3	290	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACAAATACACTTATA	-112242826	False	NA	NA	False	NA	NA	NA	112242839	112242549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112242500_112242800
WTC11_00090129	chr9	-	419	3	NNC	ENSG00000148153.14	novel	4114	5	NA	NA	58	-16682	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	86.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTGGTGTAGA	-112716870	True	NA	NA	False	AATAAA	-10	NA	112718028	112710715	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_112711012_112716460_112716542_112717986
WTC11_00090130	chr9	-	2315	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	2	53	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	85.1756355355737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGTTCAAGCAACCCTA	-113008631	True	NA	NA	False	NA	NA	NA	113012225	112997066	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112999139_113001993_113002074_113011140_113011228_113012149
WTC11_00090131	chr9	-	589	1	FSM	ENSG00000285115.1	ENST00000645617.1	422	1	11	-178	11	178	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCGCCTCCCGGCGGTC	NA	False	NA	NA	False	NA	NA	NA	113060496	113059907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113059900_113060500
WTC11_00090132	chr9	-	422	1	FSM	ENSG00000284763.1	ENST00000643253.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGCACGGGAGCCAGCAC	NA	False	NA	NA	False	NA	NA	NA	113065956	113065534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113065500_113066000
WTC11_00090133	chr9	-	670	1	FSM	ENSG00000165188.14	ENST00000478815.1	2312	1	1742	-100	842	89	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACAGAGCTCCACAGCAA	NA	False	NA	NA	False	NA	NA	NA	113298023	113297353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113297400_113298000
WTC11_00090134	chr9	-	2414	16	NNC	ENSG00000136883.16	novel	2195	19	NA	NA	-547	12632	intron_retention	FALSE	non_canonical	0	0	junction_1	5.20085463062456	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGATTGAGACCATCCTG	-114098289	True	NA	NA	False	NA	NA	NA	114098483	114073493	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_114073514_114091637_114092452_114092541_114092643_114093228_114093334_114093406_114093498_114093885_114093973_114094180_114094272_114094352_114094456_114095022_114095128_114095213_114095333_114096050_114096208_114096386_114096479_114097300_114097437_114097606_114097742_114098114_114098191_114098301
WTC11_00090135	chr9	-	4935	20	FSM	ENSG00000106948.17	ENST00000374075.9	5038	20	103	0	103	0	multi-exon	FALSE	canonical	0	0	junction_6	2.2441058531924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAGACAA	-114377515	False	NA	-38	True	AATGAA	-18	NA	114377532	114336164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465
WTC11_00090136	chr9	-	386	2	FSM	ENSG00000041982.16	ENST00000473855.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATGGAATAAGCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	115073772	115046466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115046683_115073602
WTC11_00090137	chr9	-	395	2	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTCAGAGGCCTGACAAT	NA	False	NA	NA	False	NA	NA	NA	115478882	115473198	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_115473366_115478654
WTC11_00090138	chr9	-	4474	2	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCCCTGCCCCAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	115478882	115474366	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_115474460_115474501
WTC11_00090139	chr9	-	1996	8	NNC	ENSG00000148219.18	novel	1757	9	NA	NA	1	0	intron_retention	FALSE	canonical	2	3	junction_5	27.9686413320201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686206	True	NA	-5	True	ATTAAA	-18	NA	116687220	116425227	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620305_116620444_116651527_116651794_116687065
WTC11_00090140	chr9	-	509	1	FSM	ENSG00000230734.1	ENST00000431607.1	468	1	-50	9	-50	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATACTCCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	117181145	117180636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_117180600_117181100
WTC11_00090141	chr9	-	1423	2	NNC	ENSG00000078725.13	novel	3171	8	NA	NA	39310	-286	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCGTTGGGCATGTTT	-119169543	True	NA	74	True	AATGAA	-19	NA	119169576	119166914	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_119168225_119169463
WTC11_00090143	chr9	-	6856	7	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	33	6137	18	-2223	internal_fragment	FALSE	canonical	3	39	junction_6	59.0802185356674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTAGTTAAGACTTT	-120785792	True	NA	NA	False	AATAAA	-21	NA	120793349	120759196	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148
WTC11_00090144	chr9	-	508	1	FSM	ENSG00000270917.1	ENST00000603920.1	371	1	117	-254	117	254	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATATAGGGAAAGCCTG	-120812717	False	NA	NA	False	AATAAA	-18	NA	120812728	120812220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120812200_120812700
WTC11_00090145	chr9	-	1563	10	NIC	ENSG00000095261.14	novel	569	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	162.66514874823	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGCACTAAACTGGG	-120835406	True	NA	NA	False	CATAAA	-20	NA	120842922	120815495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_120815789_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
WTC11_00090146	chr9	-	5034	3	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	18793	-7	389	7	3prime_fragment	FALSE	canonical	3	503	junction_2	39.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTATTATGTTCTT	NA	False	NA	26	True	AATAAA	-42	NA	120824129	120816045	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_120818164_120820838_120820980_120821354
WTC11_00090148	chr9	-	8345	11	NIC	ENSG00000056586.16	novel	9248	20	NA	NA	-5745	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.9148423516288	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGTTTAATGTCAAT	NA	False	NA	1	True	AATAAA	-21	NA	122861482	122844555	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_122849823_122851099_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916
WTC11_00090151	chr9	-	1997	2	FSM	ENSG00000171448.9	ENST00000373654.1	2047	2	50	0	50	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGTACTTGTCTTGG	-122931200	False	NA	-9	True	GATAAA	-15	NA	122931215	122918099	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122919945_122931063
WTC11_00090152	chr9	-	5387	18	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	-25	-919	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_17	211.438736045092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATATAGTTCTGAAGTC	-123257333	True	NA	NA	False	NA	NA	NA	123268611	123122549	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236970_123268435
WTC11_00090153	chr9	-	2714	17	NIC	ENSG00000165209.19	novel	2990	19	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	3	91	junction_5	138.151849765937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTGAATATTGTTTTAG	-123257298	True	NA	-14	True	AATAAA	-14	NA	123268576	123125047	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
WTC11_00090154	chr9	-	7063	11	NNC	ENSG00000148200.17	novel	1846	10	NA	NA	0	7521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.6480946043757	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTAAGGCCAGGTGC	-124751172	True	NA	NA	False	NA	NA	NA	124771287	124509753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124509780_124517275_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
WTC11_00090155	chr9	-	7066	11	NNC	ENSG00000148200.17	novel	7065	10	NA	NA	0	7521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.7243157418369	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTAAGGCCAGGTGC	-124751172	True	NA	NA	False	NA	NA	NA	124771287	124509753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124509780_124517275_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
WTC11_00090156	chr9	-	7062	11	NNC	ENSG00000148200.17	novel	7065	10	NA	NA	0	7521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.7243157418369	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTAAGGCCAGGTGC	-124751172	True	NA	NA	False	NA	NA	NA	124771287	124509753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124509781_124517280_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
WTC11_00090158	chr9	-	810	3	NNC	ENSG00000148200.17	novel	7065	10	NA	NA	12	-194391	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	33	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTGAGTCTTCATCAT	-124751160	True	NA	NA	False	ATTAAA	-15	NA	124771275	124732482	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124732995_124733307_124733350_124771019
WTC11_00090159	chr9	-	1968	19	FSM	ENSG00000173611.18	ENST00000373549.8	1968	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	12.0959385082375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTTTTCATTTTCCA	-125141668	True	NA	NA	False	ATTAAA	-19	NA	125143496	124952787	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125065989_125066059_125142632_125142678_125143384
WTC11_00090161	chr9	-	710	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-42948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.6272207120495	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCAGAATGTGGT	-125141668	True	NA	NA	False	NA	NA	NA	125143496	125042858	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125042889_125052204_125052596_125055875_125056008_125142632_125142678_125143384
WTC11_00090162	chr9	-	2558	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2002.19741783871	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTGAGGGAGAGACATA	-125160051	True	NA	NA	False	NA	NA	NA	125241342	125164218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164245_125236240_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
WTC11_00090163	chr9	-	3253	12	NNC	ENSG00000119487.17	novel	3369	12	NA	NA	0	51723	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.817722371577	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAAAGGCTTAAAATC	-125690144	True	NA	NA	False	NA	NA	NA	125707177	125385669	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125385696_125437396_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
WTC11_00090164	chr9	-	2977	10	FSM	ENSG00000119487.17	ENST00000394063.5	2977	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	254.416737938387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690201	True	NA	NA	False	AATAAA	-18	NA	125707234	125437393	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
WTC11_00090165	chr9	-	688	9	NNC	ENSG00000197958.13	novel	864	7	NA	NA	0	79672	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3957.29994559106	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAGGTTAAAAAACTGA	-127372243	True	NA	NA	False	AAAAAG	-7	NA	127451405	127368001	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127368033_127413947_127413973_127447674_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
WTC11_00090166	chr9	-	447	3	FSM	ENSG00000106991.14	ENST00000486329.1	663	3	0	216	0	-216	multi-exon	FALSE	canonical	3	24	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGCTCTTGGTCTCTCAA	-127824388	False	NA	NA	False	NA	NA	NA	127824405	127819453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127819661_127819899_127820038_127824303
WTC11_00090167	chr9	-	1419	8	NNC	ENSG00000106992.19	novel	2192	7	NA	NA	-49	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.383042319891	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTATAAAAGGTGAATCT	-127875329	True	NA	NA	False	AATAAA	-8	NA	127877724	127866496	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127867029_127867839_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
WTC11_00090168	chr9	-	1888	6	NNC	ENSG00000167103.12	novel	1104	5	NA	NA	0	1204	intron_retention	FALSE	canonical	2	3	junction_1	28.6984320129167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAAGTTGTGACATAG	-127926725	True	NA	NA	False	NA	NA	NA	127927491	127919676	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127919908_127920975_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
WTC11_00090169	chr9	-	903	5	NIC	ENSG00000167103.12	novel	1104	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	29.7195222034272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	-127926644	True	NA	-5	True	AATAAA	-20	NA	127927410	127921528	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127922115_127925106_127925232_127925957_127925980_127927152_127927209_127927296
WTC11_00090170	chr9	-	2984	18	NNC	ENSG00000148337.22	novel	2907	18	NA	NA	0	56093	intron_retention	FALSE	canonical	0	0	junction_1	113.30773847631	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGAGTGTTGGCTCACA	-128188711	True	NA	NA	False	AAAAAG	-1	NA	128191557	128105157	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128105187_128166069_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
WTC11_00090171	chr9	-	2979	18	NNC	ENSG00000148337.22	novel	2907	18	NA	NA	0	20305	intron_retention	FALSE	non_canonical	0	0	junction_1	113.30773847631	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAAAAGGGAGCAGAA	-128188711	True	NA	NA	False	NA	NA	NA	128191557	128140945	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128140971_128166070_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
WTC11_00090172	chr9	-	2469	16	NIC	ENSG00000148337.22	novel	2731	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	114.993023943001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTCCCACCAGTACT	-128188710	True	NA	-17	True	AATAAA	-17	NA	128191556	128166069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180800_128190328_128190445_128190687_128190863_128191431
WTC11_00090173	chr9	-	2858	16	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	34	junction_3	118.709842332751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTCCCACCAGTACT	-128188710	True	NA	-17	True	AATAAA	-17	NA	128191556	128166069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169075_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
WTC11_00090174	chr9	-	2898	16	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	133	junction_13	82.0123567925387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTCCCACCAGTACT	-128188726	True	NA	-17	True	AATAAA	-17	NA	128191572	128166069	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
WTC11_00090176	chr9	-	2287	12	NNC	ENSG00000148341.18	novel	3013	11	NA	NA	0	58325	intron_retention	FALSE	non_canonical	0	0	junction_1	169.61853165557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAACACTGCTGGCA	-129025390	True	NA	NA	False	AAAAAG	-1	NA	129028331	128948710	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128948745_129007795_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
WTC11_00090177	chr9	-	2514	5	ISM	ENSG00000148341.18	ENST00000416629.5	1415	10	16217	-416	23	0	3prime_fragment	FALSE	canonical	3	527	junction_4	37.0295490115664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-129011982	False	NA	-6	True	AATAAA	-21	NA	129011993	129008033	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669
WTC11_00090179	chr9	-	2703	1	FSM	ENSG00000188483.8	ENST00000372491.4	2710	1	4	3	4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGTGGTGCCTTGTT	-129177873	True	NA	NA	False	AATAAA	-13	NA	129178257	129175554	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129175600_129178300
WTC11_00090180	chr9	-	2465	6	NNC	ENSG00000136827.12	novel	2285	6	NA	NA	42	4959	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	147.144282933453	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAAAACCTTGAACTCC	-129820582	True	NA	NA	False	NA	NA	NA	129824202	129807982	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_129808035_129812674_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
WTC11_00090181	chr9	-	2496	15	NIC	ENSG00000187239.17	novel	1977	16	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	21.67195121321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAAAAGTGTGTGTTTT	-130038888	True	NA	-5	True	AGTAAA	-17	NA	130043159	129895269	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923940_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
WTC11_00090184	chr9	-	993	7	NNC	ENSG00000160563.14	novel	2042	4	NA	NA	1	-9014	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	139.035267308534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAAATCAAGTGATTG	-132079293	True	NA	NA	False	ATTAAA	-27	NA	132079855	131869125	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131869385_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
WTC11_00090185	chr9	-	8582	23	FSM	ENSG00000165699.15	ENST00000646625.1	8582	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_22	27.0133499288808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	-132941045	True	NA	-6	True	AATAAA	-16	NA	132944633	132891352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
WTC11_00090188	chr9	-	1435	7	NNC	ENSG00000165699.15	novel	2232	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	40.5585995813465	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941014	True	NA	-6	True	AATAAA	-19	NA	132944602	132909806	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921859_132944571
WTC11_00090189	chr9	-	2852	10	ISM	ENSG00000165699.15	ENST00000645901.1	5732	21	26	14958	3	0	5prime_fragment	FALSE	canonical	3	37	junction_9	22.7400772010807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941017	True	NA	-6	True	AATAAA	-19	NA	132944605	132909806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
WTC11_00090191	chr9	-	3859	19	NNC	ENSG00000160271.16	novel	3801	18	NA	NA	-69	3026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9348049597212	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGGGCAGAATGGATT	-133149350	False	NA	NA	False	NA	NA	NA	133149403	133094693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_133094721_133097721_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
WTC11_00090192	chr9	-	5416	11	FSM	ENSG00000160271.16	ENST00000469972.5	5817	11	0	401	0	100	multi-exon	FALSE	canonical	3	109	junction_9	11.9335661057372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCACCAAAGATTCCAT	-133108827	False	NA	NA	False	NA	NA	NA	133108838	133098120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672
WTC11_00090193	chr9	-	3696	23	FSM	ENSG00000285245.1	ENST00000647146.1	3705	23	9	0	9	0	multi-exon	FALSE	canonical	0	0	junction_17	56.04353753265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCACCAAAGATTCCAT	-133162752	True	NA	NA	False	NA	NA	NA	133163905	133098120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
WTC11_00090195	chr9	-	1977	7	FSM	ENSG00000148288.13	ENST00000372038.7	847	7	0	-1130	0	3	multi-exon	FALSE	canonical	2	4	junction_4	3.76017139089283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGATTTTTTTTGTTTT	-133162744	False	NA	-13	True	AATAAA	-25	NA	133163897	133152944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
WTC11_00090197	chr9	-	1086	8	ISM	ENSG00000148290.10	ENST00000371974.8	1092	9	31	54	29	-7	intron_retention	FALSE	canonical	3	352	junction_5	38.7113862910052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGCTCATGACTGGT	-133353317	True	NA	-9	True	TATAAA	-18	NA	133356456	133351811	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268
WTC11_00090198	chr9	-	637	4	FSM	ENSG00000148300.12	ENST00000445916.1	860	4	223	0	223	0	multi-exon	FALSE	canonical	1	1	junction_3	115.891711907664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGCCCGTGACGGACTA	-133408545	False	NA	NA	False	NA	NA	NA	133415677	133412362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133412493_133412777_133412922_133414664_133415012_133415661
WTC11_00090199	chr9	-	3206	21	NNC	ENSG00000123453.19	novel	3215	21	NA	NA	31	4	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_20	15.3995941504963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAATAGGCTTCATCT	-133737596	True	NA	-9	True	AGTAAA	-29	NA	133738321	133663555	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734222_133738253
WTC11_00090202	chr9	-	6824	6	NNC	ENSG00000148411.8	novel	6903	6	NA	NA	0	11102	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.6203607740482	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAACACAGAATCACCAC	-136050568	False	NA	NA	False	NA	NA	NA	136050580	135995434	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135995460_136006539_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635
WTC11_00090203	chr9	-	1191	1	FSM	ENSG00000260193.1	ENST00000566567.1	1274	1	118	-35	118	35	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGCCGCCATCTCTC	-136106156	False	NA	38	True	GATAAA	-9	NA	136108963	136107772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136107800_136109000
WTC11_00090204	chr9	-	2539	9	NIC	ENSG00000165689.17	novel	2314	9	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	2	12	junction_7	178.781990144421	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	-136403962	True	NA	4	True	AATAAA	-27	NA	136410606	136401912	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136409873_136410240_136410327
WTC11_00090205	chr9	-	1550	8	NIC	ENSG00000165689.17	novel	2129	8	NA	NA	0	-23	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	182.277541240868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAAAGAGTGGTTCT	-136403956	True	NA	-49	True	CATAAA	-12	NA	136410600	136402502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405117_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327
WTC11_00090208	chr9	-	2808	10	NNC	ENSG00000148384.14	novel	3417	10	NA	NA	-549	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	32.7926519923497	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136439220	False	NA	-4	True	AATAAA	-22	NA	136439239	136428618	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432584_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
WTC11_00090209	chr9	-	2248	2	ISM	ENSG00000148384.14	ENST00000676019.1	3315	10	8504	6	-158	-6	intron_retention	FALSE	canonical	3	117	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCTCTTTCTGGCCA	-136431330	False	NA	-10	True	AATAAA	-16	NA	136431341	136428624	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136429808_136430276
WTC11_00090210	chr9	-	961	1	FSM	ENSG00000148384.14	ENST00000635815.1	4311	1	3355	-5	-1605	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACTGCACCT	-136436457	False	NA	NA	False	AATAAA	-22	NA	136436468	136435507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136435500_136436500
WTC11_00090211	chr9	-	8778	29	NIC	ENSG00000148396.19	novel	6551	31	NA	NA	-8	0	intron_retention	FALSE	canonical	3	45	junction_2	44.2461084418155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	-136476002	True	NA	0	True	AATAAA	-29	NA	136483048	136440095	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
WTC11_00090213	chr9	-	1990	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	8	-3	8	0	multi-exon	FALSE	canonical	0	0	junction_4	3.49857113690718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	-136742771	True	NA	1	True	AATAAA	-24	NA	136742932	136738166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
WTC11_00090214	chr9	-	2547	10	NNC	ENSG00000159069.14	novel	2362	9	NA	NA	0	9715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.596259149982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGGCAGGGCA	-136939789	True	NA	NA	False	TTTAAA	-19	NA	136944688	136930719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136930955_136940434_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
WTC11_00090215	chr9	-	2599	10	NNC	ENSG00000159069.14	novel	2362	9	NA	NA	-56	9715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.413396174057	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGGCAGGGCA	-136944597	False	NA	NA	False	TTTAAA	-19	NA	136944794	136930719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136930955_136940434_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
WTC11_00090216	chr9	-	783	6	FSM	ENSG00000169583.13	ENST00000494426.2	809	6	0	26	0	1	multi-exon	TRUE	canonical	0	0	junction_2	2.0591260281974	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTGTCCTGACATCTG	NA	False	NA	NA	False	AATAAA	-18	NA	136996568	136994633	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136994840_136994929_136995106_136995185_136995293_136995441_136995568_136995647_136995758_136996510
WTC11_00090217	chr9	-	6303	35	FSM	ENSG00000107331.18	ENST00000479446.5	6295	35	0	-8	0	0	multi-exon	TRUE	canonical	2	13	junction_29	8.47160941556947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGGTCTGCGTGTGTGGG	-137017714	False	NA	-8	True	AATAAA	-14	NA	137018219	137007233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137007965_137008415_137008623_137008730_137008869_137008950_137009054_137009369_137009463_137009540_137009645_137009768_137009904_137009982_137010125_137010192_137010738_137010972_137011106_137011185_137011310_137011406_137011555_137011633_137011750_137011843_137012019_137012101_137012163_137012264_137012377_137012484_137012591_137012711_137012926_137013001_137013319_137013460_137013564_137013831_137014039_137014167_137014405_137014689_137014811_137014912_137015098_137015413_137015597_137015674_137015872_137015961_137016175_137016290_137016472_137016573_137016739_137016919_137017125_137017195_137017347_137017501_137017693_137017786_137017902_137017972_137018076_137018177
WTC11_00090219	chr9	-	4246	8	NNC	ENSG00000107281.10	novel	1475	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_2	84.062416072335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGTGTTGCCAGC	-137045685	False	3693	-11	True	ATTAAA	-20	NA	137046056	137039462	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137039865_137039970_137040156_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
WTC11_00090220	chr9	-	1426	2	FSM	ENSG00000054179.12	ENST00000460614.1	1427	2	0	1	0	-1	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGTGAAAGGAGAGTGTC	-137049242	False	NA	-8	True	AATAAA	-14	NA	137049613	137048107	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137048861_137048940
WTC11_00090221	chr9	-	3811	7	NNC	ENSG00000186193.9	novel	3814	6	NA	NA	-39	0	intron_retention	TRUE	non_canonical	2	156	junction_6	29.3394879906851	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGTGGTATTTATAGT	-137066701	True	NA	NA	False	AATAAA	-22	NA	137070596	137062126	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137063493_137063534_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
WTC11_00090222	chr9	-	2029	14	Fusion	ENSG00000176978.14_ENSG00000268996.3	novel	1601	13	NA	NA	0	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	51.866464864253	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGCCTGAGTTTCTCT	-137113718	True	NA	-5	True	ATTAAA	-12	NA	137114718	137084948	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_137085392_137110545_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
WTC11_00090223	chr9	-	1490	12	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	55.6173467202306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113704	True	NA	-6	True	AATAAA	-17	NA	137114704	137110545	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
WTC11_00090226	chr9	-	2416	5	NNC	ENSG00000176058.13	novel	2659	4	NA	NA	-164	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.5925291729789	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCACTGCGTGGTCCTTG	-137196448	False	NA	-4	True	AATAAA	-25	NA	137200905	137191609	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986_137200201_137200616
WTC11_00090227	chr9	-	1002	7	ISM	ENSG00000187609.16	ENST00000487745.5	1992	12	3725	-18	3725	-3	3prime_fragment	FALSE	canonical	2	3	junction_5	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGCTCACATGTTT	NA	False	NA	-4	True	AATAAA	-34	NA	137349259	137306898	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109
WTC11_00090228	chr9	-	1119	10	FSM	ENSG00000187609.16	ENST00000490886.5	1123	10	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_1	38.020462326957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCACGTGGGAACCCACG	NA	False	NA	NA	False	NA	NA	NA	137395404	137353899	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137354102_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302
WTC11_00090229	chr9	-	1051	6	ISM	ENSG00000187609.16	ENST00000490886.5	1123	10	4	12245	4	0	5prime_fragment	FALSE	canonical	2	65	junction_5	11.7915223783869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	NA	False	NA	-5	True	AATAAA	-14	NA	137395404	137366144	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302
WTC11_00090230	chr9	-	939	8	NNC	ENSG00000187609.16	novel	962	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	28.0327796462263	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421599	True	NA	-5	True	AATAAA	-14	NA	137423149	137366144	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_137366345_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
WTC11_00090231	chr9	-	801	7	NIC	ENSG00000187609.16	novel	1432	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	28.5131548587665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421612	True	NA	-5	True	AATAAA	-14	NA	137423162	137366144	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137366362_137366492_137366633_137367935_137367990_137373425_137373600_137383312_137383378_137395302_137395405_137423113
WTC11_00090233	chr9	-	1769	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	41	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	79.6938017716329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGCACCAGAAATGCT	-137575410	True	NA	32	True	AATGAA	-14	NA	137578875	137554862	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137565084_137565155_137574207_137574381_137576079_137576168_137576308_137576403_137577469_137577604_137578624
WTC11_00090234	chr9	-	1671	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	65.9792793695297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTTAAAATGAACATTT	-137575410	True	NA	4	True	ATTAAA	-31	NA	137578875	137554890	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578624
WTC11_00090235	chr9	-	2273	10	NIC	ENSG00000148399.13	novel	1414	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_6	68.2952920308585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575423	True	NA	-9	True	ATTAAA	-18	NA	137578888	137554903	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574847_137575708_137576168_137576308_137576403_137577469_137577604_137578624
WTC11_00090236	chr9	-	1878	9	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	93.2402809948576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575443	True	NA	-9	True	ATTAAA	-18	NA	137578908	137554903	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574847_137575708_137575893_137576079_137576168_137578624
WTC11_00090240	chr9	-	320	1	FSM	ENSG00000233998.1	ENST00000437270.1	562	1	303	-61	303	61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCTTGTGCTCACCC	NA	False	NA	NA	False	TTTAAA	-40	NA	137641244	137640924	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137640900_137641200
WTC11_00090241	chr9	+	484	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTCAGACATAATTCC	12952196	False	NA	NA	False	NA	NA	NA	12952207	12952691	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12952200_12952700
WTC11_00090242	chr9	+	1166	1	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGCTGGGCCGGCCCGG	NA	False	NA	NA	False	NA	NA	NA	15305570	15306736	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_15305600_15306700
WTC11_00090243	chr9	+	203	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTGAAGAGGTTTTAAG	NA	False	NA	NA	False	AAGAAA	-29	NA	21489886	21490089	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_21489900_21490100
WTC11_00090244	chr9	+	1958	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	29429616	29431574	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_29429600_29431600
WTC11_00090245	chr9	+	281	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66838544	66838825	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_66838500_66838800
WTC11_00090246	chr9	+	881	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGATCTTTCAAACCCAA	85461229	False	NA	NA	False	CATAAA	-32	NA	85461242	85462123	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85461200_85462100
WTC11_00090247	chr9	+	1906	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAATTATTGATATATGT	NA	False	NA	NA	False	NA	NA	NA	93329487	93331393	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93329500_93331400
WTC11_00090248	chr9	+	12330	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAAGATGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	100133889	100146219	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_100133900_100146200
WTC11_00090249	chr9	+	3433	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGACATCCTGAGGCCT	115484617	False	NA	NA	False	AATAAA	-38	NA	115484639	115488072	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115484600_115488100
WTC11_00090250	chr9	+	5469	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGTGCTCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	115839211	115844680	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115839200_115844700
WTC11_00090251	chr9	+	1334	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGACAGGATTTGAACC	NA	False	NA	NA	False	NA	NA	NA	122815728	122817062	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_122815700_122817100
WTC11_00090252	chr9	+	1045	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCTTGTCTCTACAAAA	NA	False	NA	NA	False	NA	NA	NA	125139629	125140674	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_125139600_125140700
WTC11_00090253	chr9	+	765	1	Antisense	novelGene_ENSG00000288924.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTCCTACTGCTCA	129892398	False	NA	NA	False	NA	NA	NA	129892410	129893175	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_129892400_129893200
WTC11_00090254	chr9	+	1088	1	Genic_Genomic	ENSG00000130713.17	novel	NA	NA	NA	NA	5790	431	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	130706620	False	NA	162	True	AATATA	-24	NA	130706631	130707719	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_130706600_130707700
WTC11_00090256	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5484	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-105703	True	NA	NA	False	NA	NA	NA	647	1601	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_600_1600
WTC11_00090257	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27822	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-5784	False	NA	NA	False	NA	NA	NA	1670	3229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_1700_3200
WTC11_00090258	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13736	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	3041	False	NA	NA	False	NA	NA	NA	3306	4262	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_3300_4300
WTC11_00090259	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10754	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	4024	False	NA	NA	False	NA	NA	NA	4469	5511	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_4500_5500
WTC11_00090260	chrM	+	2006	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	-392	-72	-392	72	mono-exon	FALSE	NA	NA	NA	NA	NA	11139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTATTAGAAAAACCATT	5296	False	NA	NA	False	NA	NA	NA	5511	7517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_5500_7500
WTC11_00090261	chrM	+	709	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	-25	0	25	mono-exon	FALSE	NA	NA	NA	NA	NA	18519	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAAAGCTAACTTAGC	1651	True	NA	NA	False	NA	NA	NA	7585	8294	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_7600_8300
WTC11_00090262	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	867	True	NA	NA	False	AATGAA	-42	NA	8365	8572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8400_8600
WTC11_00090263	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	613	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	8201	False	NA	NA	False	NA	NA	NA	8526	9207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8500_9200
WTC11_00090264	chrM	+	1418	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	-634	0	-634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32912	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	8122	False	NA	NA	False	NA	NA	NA	8572	9990	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8600_10000
WTC11_00090265	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5848	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	8743	False	NA	NA	False	AAAAAG	-19	NA	10058	10404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10100_10400
WTC11_00090266	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-1540	True	NA	NA	False	NA	NA	NA	10469	10766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10500_10800
WTC11_00090267	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10697	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-421	False	NA	NA	False	NA	NA	NA	10759	12137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10800_12100
WTC11_00090268	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	10068	True	NA	NA	False	NA	NA	NA	12336	14148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_12300_14100
WTC11_00090269	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	14461	False	NA	NA	False	AAAACA	-19	NA	14746	15887	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_14700_15900
WTC11_00090270	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	NA	False	NA	NA	False	NA	NA	NA	14673	14148	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_-_14100_14700
WTC11_00090272	chrM	+	682	1	FSM	ENSG00000210195.2	ENST00000387460.2	66	1	0	-616	0	616	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		15813	False	NA	NA	False	CATAAA	-45	NA	15887	16569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_15900_16600
WTC11_00090274	chrUn_GL000195v1	+	910	3	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	15.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	136560	True	NA	NA	False	ATTAAA	-17	NA	137980	141363	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140424_140517_140705
WTC11_00090275	chrUn_GL000195v1	-	2319	3	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	215	junction_2	24.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGTCTCAAATTACT	NA	False	NA	NA	False	AATAAA	-13	NA	86688	42940	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_44924_48954_49120_86517
WTC11_00090279	chrUn_GL000195v1	+	988	2	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	136548	True	NA	NA	False	ATTAAA	-17	NA	137968	141363	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140547
WTC11_00090280	chrUn_GL000195v1	+	1266	3	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTCTCAAAAAAAAACAAAA	136548	True	NA	NA	False	NA	NA	NA	137968	141696	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140413_140517_140705
WTC11_00090281	chrUn_GL000195v1	+	967	3	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	136593	True	NA	NA	False	ATTAAA	-17	NA	138013	141363	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140424_140449_140547
WTC11_00090282	chrUn_GL000195v1	+	6219	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGCCTCATGCATTTG	143248	False	NA	NA	False	AATAAA	-17	NA	143275	149494	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_143300_149500
WTC11_00090288	chrUn_GL000220v1	+	851	3	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	55	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACGGTGTGAACGTTTC	119808	False	NA	NA	False	AATAAA	-13	NA	119818	122355	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_120046_121604_121702_121828
WTC11_00090289	chrUn_GL000220v1	-	5434	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGTCTCGGAGGGGGACG	NA	False	NA	NA	False	NA	NA	NA	118786	113352	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_-_113400_118800
WTC11_00090292	chrUn_GL000220v1	+	12413	2	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		105409	False	NA	NA	False	NA	NA	NA	105423	161802	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_116842_160807
WTC11_00090293	chrUn_GL000220v1	+	2319	3	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	26.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAAGACGGAAAGCACGGT	119515	False	NA	NA	False	AATAAA	-2	NA	119525	122344	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_121232_121604_121702_121828
WTC11_00090294	chrUn_GL000220v1	+	1135	4	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	37.7035217924739	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGTGAACGTTTCTCTT	119665	False	NA	NA	False	AATAAA	-17	NA	119675	122359	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_120046_121094_121232_121604_121702_121828
WTC11_00090295	chrUn_GL000220v1	+	3548	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCAGAATTC	NA	False	NA	NA	False	NA	NA	NA	158239	161787	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_158200_161800
WTC11_00090299	chrUn_GL000220v1	+	1142	4	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	48.2562603883337	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	119682	False	NA	NA	False	AATAAA	-15	NA	119692	122357	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_120046_121068_121232_121604_121702_121828
WTC11_00090306	chrUn_KI270745v1	+	4021	2	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGGGGGCAAAGGCA	NA	False	NA	NA	False	AATGAA	-32	NA	19651	24885	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_KI270745v1_+_22208_23420
WTC11_00090309	chrX	+	533	5	FSM	ENSG00000182378.15	ENST00000484611.7	540	5	7	0	7	0	multi-exon	FALSE	canonical	2	12	junction_1	100.591687032279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCGAGGTGGTCATCCT	274691	True	NA	NA	False	NA	NA	NA	276330	291537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_276395_284166_284315_288732_288870_290647_290793_291498
WTC11_00090310	chrX	+	5285	8	FSM	ENSG00000182378.15	ENST00000399012.6	5287	8	2	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	67.9720831049973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	274684	True	NA	10	True	AATAAA	-18	NA	276323	303353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_276395_281481_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
WTC11_00090314	chrX	+	2124	8	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_7	55.1476681839083	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	276717	True	NA	10	True	AATAAA	-18	NA	281371	303353	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
WTC11_00090315	chrX	+	5324	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	-9	3	-9	0	multi-exon	FALSE	canonical	3	181	junction_1	17.4706102418382	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	276717	True	NA	10	True	AATAAA	-18	NA	281371	303353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
WTC11_00090317	chrX	+	697	3	FSM	ENSG00000236017.8	ENST00000420411.7	697	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGATTGTCTGAGCT	1402026	False	NA	NA	False	NA	NA	NA	1402042	1413131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1402226_1403460_1403586_1412742
WTC11_00090318	chrX	+	3213	5	FSM	ENSG00000197976.12	ENST00000313871.9	3199	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	367	junction_4	48.2979036812158	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCACGCTTACGATTTT	1587831	True	NA	21	True	AATAAA	-23	NA	1591589	1602520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600658
WTC11_00090319	chrX	+	4424	4	FSM	ENSG00000197976.12	ENST00000381261.8	2187	4	-38	-2199	-17	0	multi-exon	FALSE	canonical	3	441	junction_2	21.4009345590327	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	1587828	True	NA	3	True	AATAAA	-5	NA	1591586	1602502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191
WTC11_00090320	chrX	+	3265	6	FSM	ENSG00000197976.12	ENST00000474361.6	3232	6	-33	0	-14	0	multi-exon	FALSE	canonical	3	56	junction_4	202.763902112777	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	1587831	True	NA	3	True	AATAAA	-5	NA	1591589	1602502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600137_1600208_1600658
WTC11_00090321	chrX	+	1083	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	-101	7	15	-7	multi-exon	FALSE	canonical	0	0	junction_2	1.5723301886761	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTGGCTTCTTGTT	1615020	True	NA	NA	False	AATAAA	-8	NA	1615073	1643074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
WTC11_00090322	chrX	+	861	4	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000431582.6	602	4	-169	-90	-12	90	multi-exon	FALSE	canonical	3	112	junction_3	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTCTAAATCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	2609178	2616261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815
WTC11_00090323	chrX	+	1154	9	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000685470.1	952	9	-202	0	-12	0	multi-exon	FALSE	canonical	3	63	junction_6	17.9787200601155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	NA	False	NA	15	True	AATAAA	-16	NA	2609178	2638329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2637973
WTC11_00090324	chrX	+	1030	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	25.1783759858326	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	2607808	True	NA	15	True	AATAAA	-16	NA	2609347	2638329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
WTC11_00090326	chrX	+	1125	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	-225	189	-99	0	multi-exon	FALSE	canonical	3	123	junction_8	199.353399213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	2691061	False	NA	NA	False	NA	NA	NA	2691087	2741101	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
WTC11_00090327	chrX	+	1410	10	FSM	ENSG00000002586.20	ENST00000381192.10	1129	10	-300	19	-192	0	multi-exon	FALSE	canonical	3	595	junction_8	58.2404551603432	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	2690968	True	NA	-8	True	NA	NA	NA	2690994	2741290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
WTC11_00090328	chrX	+	718	3	FSM	ENSG00000002586.20	ENST00000647297.1	583	3	-297	162	-192	-162	multi-exon	FALSE	canonical	3	728	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGGGGCCATTTGGAC	2690968	True	NA	NA	False	AGTAAA	-22	NA	2690994	2717856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691428_2714421_2714455_2717604
WTC11_00090333	chrX	+	3370	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	-179	1	-71	0	multi-exon	FALSE	canonical	3	139	junction_9	45.7475682413831	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	NA	False	NA	28	True	ATTAAA	-13	NA	2828750	2882817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
WTC11_00090334	chrX	+	3372	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	-78	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_9	65.294716478441	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCATGTGGCCTCCTTC	NA	False	NA	26	True	ATTAAA	-11	NA	2828743	2882815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
WTC11_00090335	chrX	+	3407	11	NNC	ENSG00000056998.20	novel	3393	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	87.7861606405019	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2828788	False	NA	28	True	ATTAAA	-13	NA	2828821	2882817	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
WTC11_00090336	chrX	+	3393	12	FSM	ENSG00000056998.20	ENST00000381163.7	3393	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	95.615794538817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2828788	False	NA	29	True	ATTAAA	-14	NA	2828821	2882818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2842997_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
WTC11_00090337	chrX	+	3554	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	-92	-610	0	607	multi-exon	FALSE	canonical	3	45	junction_2	91.8488109973812	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTCTACTGATCAGGT	2828788	False	NA	85	True	AGTAAA	-13	NA	2828821	2883427	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
WTC11_00090338	chrX	+	2999	9	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	96.847738099555	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCCTCCTTCCAGTG	2829192	False	NA	31	True	ATTAAA	-16	NA	2829204	2882820	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829269_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
WTC11_00090339	chrX	+	625	5	FSM	ENSG00000056998.20	ENST00000520904.3	624	5	-1	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	118.690774704692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTCCAGCCTTCTC	2829045	False	NA	NA	False	NA	NA	NA	2829270	2855081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2829355_2830060_2830196_2843212_2843355_2853979_2854155_2854992
WTC11_00090341	chrX	+	2893	8	FSM	ENSG00000056998.20	ENST00000639373.1	2900	8	7	0	7	0	multi-exon	FALSE	canonical	3	7	junction_1	106.608572615442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCCTCCTTCCAGTG	NA	False	NA	31	True	ATTAAA	-16	NA	2842997	2882820	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
WTC11_00090344	chrX	+	230	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGGTGTCTGGAATGAGA	NA	False	NA	NA	False	NA	NA	NA	6272987	6273217	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_6273000_6273200
WTC11_00090345	chrX	+	6596	11	FSM	ENSG00000101846.9	ENST00000674429.1	6622	11	0	26	0	-11	multi-exon	FALSE	canonical	1	5	junction_8	2.20227155455452	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAAGTAATTGTAATA	7147575	True	NA	NA	False	AATAGA	-3	NA	7147711	7354615	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_7148084_7190879_7191009_7253195_7253337_7257241_7257364_7257465_7257589_7259348_7259773_7275950_7276088_7305045_7305184_7325338_7325499_7333985_7334108_7349887
WTC11_00090346	chrX	+	5437	17	NIC	ENSG00000101849.18	novel	5818	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	8.81560229082506	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	9465280	False	NA	26	True	AATAAA	-22	NA	9465293	9719740	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_9465448_9501779_9501850_9640272_9640361_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
WTC11_00090347	chrX	+	5818	18	FSM	ENSG00000101849.18	ENST00000645353.2	5818	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	12.9318147956903	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	9465024	True	NA	26	True	AATAAA	-22	NA	9465057	9719740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9465448_9501779_9501850_9640272_9640361_9653544_9653690_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
WTC11_00090348	chrX	+	496	5	FSM	ENSG00000101849.18	ENST00000422314.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	9.31396800509858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCGCCCTCATCTCCA	9465280	False	NA	NA	False	NA	NA	NA	9465293	9684118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9465448_9501779_9501850_9640272_9640361_9654214_9654323_9684042
WTC11_00090351	chrX	+	7490	10	FSM	ENSG00000146950.13	ENST00000380913.8	7474	10	-18	2	-18	0	multi-exon	FALSE	canonical	3	18	junction_2	9.3465514865836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGATGTCTTTGATTT	9784657	True	NA	9	True	AATAAA	-18	NA	9786410	9949441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9786711_9873651_9873804_9890976_9891109_9894357_9896699_9898189_9898291_9932174_9932871_9937133_9937686_9939194_9939367_9944640_9944914_9946670
WTC11_00090352	chrX	+	4483	6	FSM	ENSG00000146950.13	ENST00000418909.6	4615	6	132	0	-117	0	multi-exon	FALSE	canonical	0	0	junction_1	16.8475517509222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGATGTCTTTGATTT	NA	False	NA	9	True	AATAAA	-18	NA	9912565	9949441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9912588_9932174_9932871_9937133_9937686_9939194_9939367_9944643_9944914_9946670
WTC11_00090353	chrX	+	567	1	FSM	ENSG00000234469.4	ENST00000445307.4	995	1	55	373	55	-373	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGTATTTCAGAAATG	NA	False	NA	NA	False	NA	NA	NA	9967412	9967979	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9967400_9968000
WTC11_00090354	chrX	+	1446	2	FSM	ENSG00000047644.20	ENST00000466248.1	531	2	-540	-375	1	375	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTCAAGCAGGGGAAAA	10014243	True	NA	NA	False	AATAAA	-42	NA	10015254	10017237	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_10015859_10016395
WTC11_00090355	chrX	+	6951	23	NIC	ENSG00000047644.20	novel	6949	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	93	junction_12	12.2982898764136	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGAAATGTGTGGCT	10014242	True	NA	10	True	ATTAAA	-18	NA	10015253	10144474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_10015859_10063444_10063555_10067286_10067491_10078798_10078876_10079724_10079805_10090770_10090901_10094131_10094282_10098505_10098580_10109777_10110021_10116417_10116508_10117123_10117690_10122618_10122740_10124264_10124340_10125023_10125111_10126113_10126307_10127987_10128162_10128556_10128709_10129955_10130122_10134431_10134597_10136632_10136726_10138708_10138937_10139412_10139541_10141434
WTC11_00090356	chrX	+	6916	13	FSM	ENSG00000073464.13	ENST00000380833.9	6759	13	-157	0	-157	0	multi-exon	TRUE	canonical	3	6	junction_1	6.86122357082823	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGATACTGATTTCA	NA	False	NA	NA	False	AATAAA	-32	NA	10156817	10237660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_10157101_10158288_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
WTC11_00090357	chrX	+	2285	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	52	junction_1	112.466291246163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	11105668	True	NA	23	True	AATAAA	-19	NA	11111292	11123078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
WTC11_00090358	chrX	+	2343	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	-39	8	-8	0	multi-exon	FALSE	canonical	3	322	junction_4	22.341416447685	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	11105668	True	NA	23	True	AATAAA	-19	NA	11111292	11123078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
WTC11_00090359	chrX	+	3480	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	20.7469877331626	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTACTTTTTATTT	11757842	True	NA	6	True	AATAAA	-19	NA	11758202	11767977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
WTC11_00090361	chrX	+	2291	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	-16	11	-5	1	multi-exon	FALSE	canonical	3	25	junction_1	18.1680045378927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTTCACTCTGGCCT	11757860	True	NA	15	True	AATAAA	-29	NA	11758220	11775761	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
WTC11_00090365	chrX	+	6025	7	FSM	ENSG00000005302.19	ENST00000473380.2	6258	7	233	0	1	0	multi-exon	FALSE	canonical	3	64	junction_4	9.85590629464835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTCAAGGCTACT	11759345	True	NA	NA	False	NA	NA	NA	11759634	11768999	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779
WTC11_00090366	chrX	+	2529	12	FSM	ENSG00000005302.19	ENST00000649078.1	2507	12	-22	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	14.0265391901528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	11759305	False	NA	7	True	AATAAA	-21	NA	11759401	11775753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
WTC11_00090367	chrX	+	2516	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	-47	0	10	0	multi-exon	FALSE	canonical	3	168	junction_2	16.0692943909253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	12786103	True	NA	9	True	AATAAA	-20	NA	12791364	12824222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
WTC11_00090368	chrX	+	3840	7	FSM	ENSG00000101911.13	ENST00000398491.6	1348	7	-23	-2469	-23	1333	multi-exon	FALSE	canonical	3	18	junction_2	67.9452393884631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGAATTGCTTGGTT	12786121	True	NA	NA	False	AATAAA	-19	NA	12791382	12825555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12791620_12799206_12799400_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
WTC11_00090369	chrX	+	763	4	FSM	ENSG00000101911.13	ENST00000489404.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	14.8996644257513	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATATTGGTTTATTTG	12786226	True	NA	NA	False	AATACA	-20	NA	12791487	12810369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021
WTC11_00090370	chrX	+	971	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	-201	-3	-67	3	multi-exon	FALSE	canonical	3	132	junction_1	19303.5	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTCTGTTTGGTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	12975042	12977230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12975444_12976245_12976362_12976776
WTC11_00090371	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	37669	junction_1	535	2533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	12746358	True	NA	23	True	AATAAA	-12	NA	12975109	12977223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12975169_12976245_12976362_12976776
WTC11_00090372	chrX	+	1739	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	-37	0	-37	0	multi-exon	FALSE	canonical	3	38739	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	NA	False	NA	26	True	AATAAA	-15	NA	12975072	12977226	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12976362_12976776
WTC11_00090373	chrX	+	2333	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	-22	-277	-22	277	multi-exon	FALSE	canonical	3	122	junction_2	2.5	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCTCTACTAAAAATACAA	13685413	True	NA	NA	False	NA	NA	NA	13689105	13710781	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13689289_13703813_13703903_13708720
WTC11_00090375	chrX	+	3335	22	NIC	ENSG00000046651.16	novel	3612	23	NA	NA	-13	0	intron_retention	FALSE	canonical	3	50	junction_18	27.1649033274392	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTCCCTATCATCAG	13732848	True	NA	-31	True	NA	NA	NA	13734729	13769173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090377	chrX	+	4313	23	FSM	ENSG00000046651.16	ENST00000682953.1	4299	23	-14	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	41.0260197621054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	13732861	True	NA	-39	True	NA	NA	NA	13734742	13769311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090378	chrX	+	4277	23	FSM	ENSG00000046651.16	ENST00000682237.1	4259	23	-18	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	31.0596600003742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTATTTTTGTCTTAA	13732861	True	NA	3	True	AATAAA	-17	NA	13734742	13769353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090380	chrX	+	6615	21	FSM	ENSG00000046651.16	ENST00000464463.6	6615	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	29.1418513481899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGACTCTGCACATTA	13732907	True	NA	NA	False	AATAAA	-41	NA	13734788	13770855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090381	chrX	+	3141	21	NIC	ENSG00000046651.16	novel	3296	22	NA	NA	15	0	intron_retention	FALSE	canonical	3	15	junction_9	31.9769839103065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTCCCTATCATCAG	13732922	True	NA	-31	True	NA	NA	NA	13734803	13769173	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090382	chrX	+	3296	22	FSM	ENSG00000046651.16	ENST00000380550.6	3296	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.4848202067611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	13733016	False	NA	-39	True	NA	NA	NA	13734897	13769311	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00090383	chrX	+	415	1	FSM	ENSG00000233247.3	ENST00000411687.1	547	1	-124	256	-124	-256	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACATCAACAGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	14244257	14244672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14244300_14244700
WTC11_00090384	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	9.23861682376353	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	14872289	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
WTC11_00090385	chrX	+	748	3	FSM	ENSG00000130150.12	ENST00000461777.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTATATTGTTT	14872359	True	NA	NA	False	NA	NA	NA	14873490	14893353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14873538_14873688_14873759_14892722
WTC11_00090387	chrX	+	357	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTGTCTTTATTATCA	NA	False	NA	16	True	AATAAA	-19	NA	15647064	15647421	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_15647100_15647400
WTC11_00090388	chrX	+	457	4	FSM	ENSG00000186312.10	ENST00000448692.5	443	4	-14	0	-14	0	multi-exon	FALSE	canonical	2	3	junction_3	64.4101441285972	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGGAGAGGAGGAGG	15674652	True	NA	NA	False	NA	NA	NA	15674958	15691241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15675025_15675689_15675779_15688660_15688859_15691137
WTC11_00090389	chrX	+	6842	4	NIC	ENSG00000186312.10	novel	926	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	64	junction_3	32.355662392986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15673738	True	NA	NA	False	AATAAA	-21	NA	15675715	15703724	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675779_15688660_15688859_15692962_15693059_15697239
WTC11_00090391	chrX	+	6806	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	24	7	5	-7	multi-exon	FALSE	canonical	2	6	junction_3	3.15581743348207	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAACTATTATTACTAT	15737968	True	NA	-3	True	AATAAA	-12	NA	15738293	15788404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
WTC11_00090392	chrX	+	1911	12	NNC	ENSG00000169249.14	novel	5385	13	NA	NA	-69	1086	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	48.9717408814377	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTCCTGAATATCTGAAA	NA	False	NA	NA	False	NA	NA	NA	15790086	15824346	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730_15823197_15824247
WTC11_00090393	chrX	+	744	4	FSM	ENSG00000169249.14	ENST00000380308.7	744	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	61.8456860976486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATGTATCTTTGT	15788174	True	NA	NA	False	TTTAAA	-1	NA	15790471	15801790	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15801273
WTC11_00090394	chrX	+	1492	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	-13	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	24.174573419194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	15788173	True	NA	18	True	AATAAA	-18	NA	15790470	15823260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
WTC11_00090395	chrX	+	1551	11	NNC	ENSG00000169249.14	novel	5385	13	NA	NA	74	91	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	63.3754684400833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGAATTCTATTTAAA	15788288	False	NA	109	True	NA	NA	NA	15790585	15823351	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_15790734_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822844
WTC11_00090396	chrX	+	8425	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	-37	-5971	-37	5971	multi-exon	FALSE	canonical	3	16	junction_1	5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCCCCACAGTTCCTT	16123513	False	NA	25	True	AATAAA	-32	NA	16123527	16159489	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16124367_16150304_16150657_16152255
WTC11_00090397	chrX	+	2636	2	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTTCGGGTCTTCAT	16576740	False	NA	22	True	AATAAA	-25	NA	16577084	16584002	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567
WTC11_00090398	chrX	+	1530	4	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	18	junction_1	13.4412301024373	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTTCGGGTCTTCAT	16576448	True	NA	22	True	AATAAA	-25	NA	16577197	16584002	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16580619_16580739_16581567_16581717_16582828
WTC11_00090399	chrX	+	6177	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	587	junction_1	32.7175411667809	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	16707668	True	NA	13	True	AATAAA	-27	NA	16719587	16765340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
WTC11_00090400	chrX	+	4385	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	-23	0	11	0	multi-exon	FALSE	canonical	3	163	junction_8	14.7932250092006	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	16776596	True	NA	104	True	AGTAAA	-19	NA	16786442	16844519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
WTC11_00090401	chrX	+	213	3	FSM	ENSG00000169891.18	ENST00000481792.1	438	3	0	225	0	-225	multi-exon	FALSE	canonical	2	6	junction_2	1	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAGAATGATGGTGAG	16946925	False	NA	NA	False	NA	NA	NA	16947069	17022146	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16947135_17006220_17006345_17022122
WTC11_00090402	chrX	+	4615	5	FSM	ENSG00000047634.15	ENST00000487842.1	4615	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.9474565306379	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17743845	False	NA	10	True	AATAAA	-20	NA	17743868	17754985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
WTC11_00090403	chrX	+	7448	1	ISM	ENSG00000008086.13	ENST00000623535.2	14572	18	203218	3923	-20978	-3923	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATACTTTTTAATGTTC	NA	False	NA	NA	False	AATGAA	-11	NA	18628825	18636273	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_18628800_18636300
WTC11_00090404	chrX	+	249	1	FSM	ENSG00000224224.1	ENST00000439908.1	784	1	113	422	113	-422	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACTGGAAAATTTTGAA	NA	False	NA	NA	False	AAGAAA	-7	NA	18865883	18866132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_18865900_18866100
WTC11_00090405	chrX	+	3274	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	3	0	3	0	multi-exon	FALSE	canonical	3	131	junction_5	388.732921104731	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332118	True	NA	36	True	AATAAA	-38	NA	19343895	19361705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
WTC11_00090406	chrX	+	3481	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	3	0	3	0	multi-exon	FALSE	canonical	3	32	junction_1	503.779730168777	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332118	True	NA	36	True	AATAAA	-38	NA	19343895	19361705	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
WTC11_00090408	chrX	+	3354	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	-5	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	81.2561382296747	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	19332144	True	NA	49	True	AAAAAG	-19	NA	19343921	19361718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
WTC11_00090409	chrX	+	734	5	FSM	ENSG00000131828.14	ENST00000379805.3	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	97.5663235957982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATTATAATGGAGCTG	19332190	True	NA	NA	False	NA	NA	NA	19343967	19353327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081
WTC11_00090410	chrX	+	535	3	FSM	ENSG00000131828.14	ENST00000479146.1	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_1	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCGGCAGCCAGCACT	19352798	False	NA	NA	False	NA	NA	NA	19352828	19355445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19353174_19354490_19354584_19355348
WTC11_00090414	chrX	+	5908	21	FSM	ENSG00000149970.16	ENST00000425654.7	5669	21	-167	-72	-47	72	multi-exon	FALSE	canonical	3	11	junction_11	6.64379409674924	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTAGTTTCGAGTTCT	21374240	False	NA	82	True	NA	NA	NA	21374250	21654767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
WTC11_00090417	chrX	+	5040	20	FSM	ENSG00000149970.16	ENST00000645245.1	5040	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	6.63700696819318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATGTAAAAAAAAAAA	21373592	True	NA	NA	False	ATTAAA	-13	NA	21374467	21654263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
WTC11_00090418	chrX	+	5374	21	FSM	ENSG00000149970.16	ENST00000644585.1	5374	21	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	6.87313611097583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGACTCGTGGCTAGCC	21373635	False	NA	NA	False	ATTAAA	-12	NA	21374510	21654550	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
WTC11_00090419	chrX	+	3760	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	-18	715	0	-715	multi-exon	FALSE	canonical	3	77	junction_5	8.49346153749394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCTTCTTATTAACT	21837621	True	NA	11	True	AATAAA	-22	NA	21839635	21872369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
WTC11_00090420	chrX	+	4452	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	58	junction_8	11.6687617166519	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	21837596	True	NA	24	True	AATAAA	-32	NA	21839610	21885423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
WTC11_00090421	chrX	+	1925	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	-295	-456	-289	92	multi-exon	FALSE	canonical	2	26	junction_2	481.16484636245	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCACTCGATGTCATTT	NA	False	NA	108	True	NA	NA	NA	21940419	21994929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
WTC11_00090422	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	2	1181	junction_6	111.42190089924	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	21915644	True	NA	16	True	ATTAAA	-16	NA	21940708	21994837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
WTC11_00090423	chrX	+	1878	2	NNC	ENSG00000174028.6	novel	681	2	NA	NA	-172	1025	at_least_one_novel_splicesite	FALSE	non_canonical	3	672	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGACCCCAAATGACTT	23075509	True	NA	NA	False	TTTAAA	-10	NA	23075585	23077792	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_23076328_23076656
WTC11_00090424	chrX	+	1545	3	NNC	ENSG00000165186.12	novel	12883	3	NA	NA	-484	-12422	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	2	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCCCAAGATATATCACA	23334171	True	NA	NA	False	NA	NA	NA	23334364	23380686	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_23334462_23334874_23335227_23379590
WTC11_00090425	chrX	+	659	4	FSM	ENSG00000123131.13	ENST00000379349.5	815	4	156	0	156	0	multi-exon	FALSE	canonical	1	1	junction_1	1473.56084216281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTCAGTGGTTTTAT	23664406	False	NA	NA	False	NA	NA	NA	23664417	23679287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23664719_23671528_23671647_23674989_23675107_23679164
WTC11_00090427	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_6	355.934294810464	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	23641513	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
WTC11_00090431	chrX	+	1159	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	-24	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	286.757010957593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779066	True	NA	24	True	AATAAA	-17	NA	23783172	23786210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
WTC11_00090432	chrX	+	1085	7	NNC	ENSG00000130066.17	novel	1049	6	NA	NA	0	38483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	238.548853603524	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACATGTGAAAGTAATAA	23779066	True	NA	NA	False	NA	NA	NA	23783172	23824693	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685_23786211_23824657
WTC11_00090433	chrX	+	788	5	FSM	ENSG00000130741.11	ENST00000423068.1	773	5	-15	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_3	81.7633781102518	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGTGTAAAACTATTT	24038251	True	NA	NA	False	TTTAAA	-29	NA	24054955	24060479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087
WTC11_00090434	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_6	115.565229693233	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	24038251	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
WTC11_00090435	chrX	+	453	2	FSM	ENSG00000130741.11	ENST00000460032.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	1353	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATACAAAAAATTAGC	24071635	False	NA	NA	False	NA	NA	NA	24071712	24073528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24071728_24073090
WTC11_00090440	chrX	+	7579	11	FSM	ENSG00000005889.16	ENST00000379177.5	7558	11	-21	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.9211259628756	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	24148857	True	NA	8	True	AATAAA	-22	NA	24149723	24216089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24161714_24161843_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
WTC11_00090441	chrX	+	2147	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	-48	-358	-6	358	multi-exon	FALSE	canonical	3	193	junction_3	17.9599554565149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAGCAAAAAATTTAAAAA	24460067	True	NA	NA	False	NA	NA	NA	24465237	24534780	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
WTC11_00090442	chrX	+	12742	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	-22	0	-6	0	multi-exon	FALSE	canonical	3	149	junction_11	26.0314495108583	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	24460093	True	NA	21	True	AATAAA	-18	NA	24465263	24550466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
WTC11_00090443	chrX	+	1394	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	12	397	12	-397	multi-exon	FALSE	canonical	3	125	junction_7	14.8507728602068	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTTGGCGATGATT	24689448	True	NA	NA	False	TATAAA	-22	NA	24693884	24724451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
WTC11_00090445	chrX	+	5501	37	FSM	ENSG00000101868.13	ENST00000379068.8	5487	37	-14	0	-5	0	multi-exon	TRUE	canonical	3	122	junction_19	24.3304158575736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	24689467	True	NA	17	True	AATAAA	-17	NA	24693903	24996986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
WTC11_00090448	chrX	+	378	1	FSM	ENSG00000236683.3	ENST00000415560.1	1062	1	204	480	204	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTGCCCTCCTGGAC	NA	False	NA	NA	False	NA	NA	NA	26748232	26748610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_26748200_26748600
WTC11_00090449	chrX	+	240	1	FSM	ENSG00000178556.8	ENST00000424932.2	240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCAAGCTACTTTTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	30617453	30617693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30617500_30617700
WTC11_00090450	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_8	18.0568508188954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
WTC11_00090451	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	18.8547443642589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
WTC11_00090452	chrX	+	3661	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	854	0	0	multi-exon	FALSE	canonical	3	33	junction_8	14.4446356824947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652750	True	NA	NA	False	AATAAA	-18	NA	30653422	30730608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
WTC11_00090456	chrX	+	327	1	FSM	ENSG00000226781.1	ENST00000436520.1	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTCGTATGGGGTG	NA	False	NA	NA	False	TATAAA	-43	NA	33041394	33041721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_33041400_33041700
WTC11_00090457	chrX	+	741	1	FSM	ENSG00000235510.1	ENST00000421222.1	227	1	-245	-269	-245	269	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTATTTTGGGTATTTG	36957598	True	NA	NA	False	NA	NA	NA	36957667	36958408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_36957700_36958400
WTC11_00090458	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	12.1197726417986	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	37348394	True	NA	5	True	AATAAA	-18	NA	37349363	37457291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
WTC11_00090461	chrX	+	4461	5	NNC	ENSG00000130962.18	novel	760	2	NA	NA	28608	20853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.821720830402	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATCACTCCTTTATA	NA	False	NA	NA	False	NA	NA	NA	37377986	37478145	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_37378071_37406208_37406260_37425839_37426001_37453135_37457287_37478131
WTC11_00090463	chrX	+	5217	3	FSM	ENSG00000047597.7	ENST00000378616.5	5174	3	-53	10	-53	-10	multi-exon	TRUE	canonical	3	9	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTATTTCATTCTT	37685726	False	NA	10	True	AATAAA	-42	NA	37685737	37732120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37686207_37694285_37694549_37727635
WTC11_00090464	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	11.0804111026659	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	38560364	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
WTC11_00090465	chrX	+	3787	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-33	4	-14	-4	multi-exon	FALSE	canonical	3	18	junction_1	197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	38798175	True	NA	21	True	AATAAA	-25	NA	38801425	38806528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38801488_38802534_38804414_38804682
WTC11_00090466	chrX	+	4831	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	-17	0	-2	0	multi-exon	FALSE	canonical	3	412	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	38798187	True	NA	30	True	AATAAA	-34	NA	38801437	38806537	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38804414_38804682
WTC11_00090467	chrX	+	322	2	FSM	ENSG00000289068.1	ENST00000688474.1	357	2	37	-2	37	2	multi-exon	FALSE	canonical	2	11	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGGTATTTTGTTATG	39653105	True	NA	7	True	AATAAA	-18	NA	39653286	39671316	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_39653462_39671169
WTC11_00090468	chrX	+	2660	2	Fusion	ENSG00000289122.1_ENSG00000223486.1	novel	472	2	NA	NA	-126	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGAGAAAACACTCCGCAT	40007060	False	NA	22	True	AATAAA	-33	NA	40007126	40012182	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_40007622_40010017
WTC11_00090469	chrX	+	477	3	FSM	ENSG00000182220.15	ENST00000487051.2	1603	3	-11	1137	-5	-1105	multi-exon	FALSE	canonical	3	978	junction_2	8.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTATTTATTATAAAAA	40570413	True	NA	NA	False	NA	NA	NA	40580888	40591365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233
WTC11_00090470	chrX	+	1950	8	FSM	ENSG00000182220.15	ENST00000637327.1	1929	8	-21	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_1	338.44464172181	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAAATAAAGTTAATG	40570413	True	NA	-6	True	NA	NA	NA	40580888	40606606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
WTC11_00090471	chrX	+	2012	9	FSM	ENSG00000182220.15	ENST00000636787.1	2012	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	326.767788345179	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATCAAGAGTGACAAATAA	40570467	True	NA	-14	True	NA	NA	NA	40580942	40606598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600768_40600882_40605560
WTC11_00090472	chrX	+	1117	7	FSM	ENSG00000182220.15	ENST00000423649.2	1093	7	-24	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	368.257910830017	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	40570482	True	NA	94	True	NA	NA	NA	40580957	40605945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
WTC11_00090473	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_3	25.6259146178239	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	40570494	True	NA	NA	False	NA	NA	NA	40580969	40606848	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
WTC11_00090474	chrX	+	369	1	FSM	ENSG00000182220.15	ENST00000636223.1	544	1	9	166	9	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATAATTTCCTATTTTA	40605112	False	NA	NA	False	AAGAAA	-35	NA	40605129	40605498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40605100_40605500
WTC11_00090475	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	40735385	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40735791_40738192
WTC11_00090476	chrX	+	391	1	FSM	ENSG00000238222.3	ENST00000444706.2	1521	1	364	766	364	-766	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGGACAGTGCCGAT	NA	False	NA	NA	False	NA	NA	NA	40834848	40835239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40834800_40835200
WTC11_00090477	chrX	+	423	1	FSM	ENSG00000237931.1	ENST00000422221.1	752	1	214	115	214	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACTGGCATCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	41077212	41077635	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41077200_41077600
WTC11_00090478	chrX	+	12543	45	FSM	ENSG00000124486.14	ENST00000378308.7	12543	45	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_13	177.297252091434	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	41082188	True	NA	NA	False	AATAAA	-16	NA	41085444	41236579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152947_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229780_41230500_41230597_41232386
WTC11_00090479	chrX	+	12591	45	FSM	ENSG00000124486.14	ENST00000324545.9	12591	45	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_43	230.320366173685	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	41082188	True	NA	NA	False	AATAAA	-16	NA	41085444	41236579	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152947_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229828_41230500_41230597_41232386
WTC11_00090480	chrX	+	666	2	FSM	ENSG00000124486.14	ENST00000463829.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCAAGAGCATTTAAT	41188019	True	NA	NA	False	AATAAA	-24	NA	41188065	41189922	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41188118_41189308
WTC11_00090481	chrX	+	688	2	FSM	ENSG00000124486.14	ENST00000485180.1	757	2	0	69	0	-69	multi-exon	FALSE	canonical	3	1439	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTCTTTATTTTATAGG	41228947	False	NA	NA	False	AAAAAG	-39	NA	41228982	41229827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41229410_41229566
WTC11_00090482	chrX	+	4930	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	-734	358	43	0	multi-exon	FALSE	canonical	3	231	junction_15	107.601986505826	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCAGATTCTCAGATGT	41333429	False	NA	-31	True	AATGAA	-24	NA	41333440	41349851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
WTC11_00090485	chrX	+	4635	17	FSM	ENSG00000215301.11	ENST00000644876.2	4635	17	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_15	60.8439345785593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAATGTTATTTTTTG	41321339	True	NA	26	True	AATAAA	-19	NA	41334161	41350274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00090489	chrX	+	5493	16	FSM	ENSG00000215301.11	ENST00000646196.1	5493	16	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_14	62.8338196267654	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTCTTGCCTGAAAAA	41321339	True	NA	6	True	NA	NA	NA	41334161	41350254	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00090490	chrX	+	4698	16	FSM	ENSG00000215301.11	ENST00000645338.1	4698	16	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_14	62.1068613135636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGCCTGAAAAATTGT	41321339	True	NA	10	True	AATAAA	-3	NA	41334161	41350258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00090491	chrX	+	4620	17	FSM	ENSG00000215301.11	ENST00000644074.1	4620	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	182.97343343707	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAAAAATTGTAAAATGT	41321339	True	NA	17	True	AATAAA	-10	NA	41334161	41350265	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339038_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
WTC11_00090492	chrX	+	4632	17	FSM	ENSG00000215301.11	ENST00000399959.7	4632	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	163.20116756246	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAATGTTATTTTTTG	41321339	True	NA	26	True	AATAAA	-19	NA	41334161	41350274	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339038_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00090494	chrX	+	5792	14	FSM	ENSG00000215301.11	ENST00000642424.1	5789	14	-3	0	0	0	multi-exon	FALSE	canonical	3	445	junction_12	66.2998389066916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGCACAGTCTCCTTT	41339973	False	NA	8	True	AATAAA	-5	NA	41340005	41350195	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00090498	chrX	+	4024	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	-95	2	-6	0	multi-exon	FALSE	canonical	3	33	junction_13	5.71473212541989	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGACTCGACTCCTGT	43655817	True	NA	17	True	AATAAA	-17	NA	43656203	43746815	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
WTC11_00090499	chrX	+	825	1	FSM	ENSG00000214019.2	ENST00000397254.2	1590	1	872	-107	872	107	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATACAATTCCCGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	44030203	44031028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44030200_44031000
WTC11_00090500	chrX	+	5812	29	FSM	ENSG00000147050.17	ENST00000382899.9	5778	29	-34	0	-34	0	multi-exon	FALSE	canonical	3	30	junction_12	78.4262620008666	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	44872481	True	NA	3	True	AATAAA	-12	NA	44873153	45112598	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00090501	chrX	+	5613	28	FSM	ENSG00000147050.17	ENST00000675577.1	5599	28	-14	0	-14	0	multi-exon	FALSE	canonical	3	44	junction_1	66.3026688433249	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	44872501	True	NA	20	True	AATATA	-36	NA	44873173	45112542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00090503	chrX	+	6395	28	FSM	ENSG00000147050.17	ENST00000674739.1	6395	28	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	77.3985995343362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	44872515	True	NA	20	True	AATATA	-36	NA	44873187	45112542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00090505	chrX	+	5775	29	FSM	ENSG00000147050.17	ENST00000377967.9	5761	29	-14	0	-14	0	multi-exon	FALSE	canonical	3	44	junction_1	67.861456629801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTATAATAGTAGAAAA	44872501	True	NA	7	True	AATAAA	-16	NA	44873173	45112602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00090506	chrX	+	6108	30	FSM	ENSG00000147050.17	ENST00000611820.5	6094	30	-14	0	-14	0	multi-exon	FALSE	canonical	3	33	junction_13	77.7039107174458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTTTGAAATCTCATG	44872501	True	NA	9	True	AATAAA	-26	NA	44873173	45112779	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00090514	chrX	+	1374	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	20	junction_5	19.4586741583285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	46446518	True	NA	NA	False	NA	NA	NA	46447271	46473669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
WTC11_00090515	chrX	+	2368	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	-34	0	-29	0	multi-exon	FALSE	canonical	3	8	junction_5	24.0283166285115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	46446509	True	NA	16	True	AATAAA	-16	NA	46447262	46474639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
WTC11_00090516	chrX	+	2193	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	26	-141	8	141	multi-exon	FALSE	canonical	3	61	junction_1	0	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTTTTTAAAATGTGA	46544819	True	NA	NA	False	AATACA	-26	NA	46545518	46548549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46545628_46546465
WTC11_00090517	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	46572238	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46575424_46597759
WTC11_00090518	chrX	+	3815	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	-115	0	-115	0	multi-exon	FALSE	canonical	3	80	junction_2	15.945218719102	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	46835312	True	NA	99	True	AATAAA	-18	NA	46836927	46882358	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
WTC11_00090519	chrX	+	4737	11	FSM	ENSG00000102221.14	ENST00000611250.4	4713	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	12	junction_1	19.5386795869117	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	46912151	True	NA	15	True	ATTAAA	-16	NA	46912251	47061242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46912341_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
WTC11_00090520	chrX	+	4961	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	-14	0	-14	0	multi-exon	FALSE	canonical	3	46	junction_2	11.7477657450257	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	46912395	False	NA	15	True	ATTAAA	-16	NA	46912406	47061242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
WTC11_00090521	chrX	+	1404	6	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_3	7.863841300535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTATTATGTTCCTTTT	47078238	True	NA	21	True	AATAAA	-15	NA	47078365	47093308	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
WTC11_00090522	chrX	+	3394	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	52.5689753035119	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136000	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
WTC11_00090523	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	60.392071238127	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136000	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
WTC11_00090524	chrX	+	3108	23	FSM	ENSG00000182872.16	ENST00000345781.10	3108	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	85.6794429378994	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136058	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
WTC11_00090525	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	80.3714645508565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136058	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
WTC11_00090526	chrX	+	3582	24	FSM	ENSG00000182872.16	ENST00000329236.8	3201	24	-381	0	-155	0	multi-exon	TRUE	canonical	3	40	junction_1	80.7281137856418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	47145020	False	NA	27	True	AATAAA	-16	NA	47145065	47186812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
WTC11_00090527	chrX	+	3533	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	-69	2	-69	0	multi-exon	TRUE	canonical	3	275	junction_1	269.732774426839	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCGCCTGCCCTGCTGG	47187665	True	NA	12	True	AATAAA	-15	NA	47190791	47215126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
WTC11_00090530	chrX	+	3594	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	-22	0	-22	0	multi-exon	FALSE	canonical	3	530	junction_1	238.456959638422	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180086	True	NA	14	True	AATAAA	-17	NA	47193806	47215128	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
WTC11_00090531	chrX	+	3617	27	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	354.888016757216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCGCCTGCCCTGCTGG	47180108	True	NA	12	True	AATAAA	-15	NA	47193828	47215126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47194025_47198308_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
WTC11_00090532	chrX	+	7901	26	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	147	junction_1	287.430826460907	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCGCCTGCCCTGCTGG	47180108	True	NA	12	True	AATAAA	-15	NA	47193828	47215126	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
WTC11_00090535	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	204.708855586551	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47217376	True	NA	15	True	ATTAAA	-17	NA	47218232	47229997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
WTC11_00090536	chrX	+	573	3	FSM	ENSG00000102225.17	ENST00000520295.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	34	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCGTATGCGCAACCA	47218372	False	NA	NA	False	NA	NA	NA	47218386	47224473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47218665_47223551_47223760_47224386
WTC11_00090538	chrX	+	3151	16	FSM	ENSG00000102225.17	ENST00000357227.9	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	66.2696176405313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47211382	True	NA	15	True	ATTAAA	-17	NA	47218680	47229997	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47219106_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
WTC11_00090540	chrX	+	2232	17	NIC	ENSG00000102225.17	novel	3151	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	285.479831818291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTTGGTCTGTCTGTCT	47211411	True	NA	23	True	NA	NA	NA	47218709	47228987	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47219106_47222260_47222381_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
WTC11_00090550	chrX	+	3224	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	-29	1	-4	0	multi-exon	TRUE	canonical	3	484	junction_4	54.7231897827603	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCAGTGTGGTTTTTT	47230748	True	NA	18	True	TATAAA	-18	NA	47232979	47248327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
WTC11_00090558	chrX	+	1253	1	FSM	ENSG00000196741.5	ENST00000357412.2	1253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCGGGCATGGTGTTG	47483507	False	NA	NA	False	ACTAAA	-13	NA	47483570	47484823	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47483600_47484800
WTC11_00090559	chrX	+	1288	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	-17	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	30.6659420204239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	47556737	True	NA	NA	False	AATAAA	-20	NA	47561204	47565975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
WTC11_00090560	chrX	+	2398	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	-20	0	-20	0	multi-exon	FALSE	non_canonical	2	193	junction_12	41.4549822766282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	47556717	True	NA	28	True	NA	NA	NA	47561184	47571908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
WTC11_00090561	chrX	+	365	2	FSM	ENSG00000078061.14	ENST00000469505.1	559	2	0	194	0	-194	multi-exon	FALSE	canonical	3	346	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGATCCCCTCAGGCAT	47564991	False	NA	NA	False	NA	NA	NA	47569458	47570058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47569658_47569892
WTC11_00090562	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	26.2800304413827	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578770	True	NA	12	True	AATAAA	-17	NA	47582435	47586789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
WTC11_00090563	chrX	+	575	2	FSM	ENSG00000102265.12	ENST00000445623.1	595	2	20	0	20	0	multi-exon	FALSE	canonical	3	470	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47585347	False	NA	12	True	AATAAA	-17	NA	47585361	47586789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47585668_47586520
WTC11_00090565	chrX	+	618	3	NIC	ENSG00000197779.15	novel	11230	5	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTAAATAAGTGTTTT	47836060	True	NA	5	True	AATAAA	-5	NA	47836901	47861034	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47836988_47846104_47846322_47860719
WTC11_00090567	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	41.1713054066651	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	48473725	True	NA	14	True	AATATA	-26	NA	48476198	48486350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
WTC11_00090568	chrX	+	1391	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	56.9160785718763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGAGTCACTTTTCTT	48473729	True	NA	30	True	TATAAA	-44	NA	48476202	48482953	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
WTC11_00090569	chrX	+	1402	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	3396	0	0	5prime_fragment	FALSE	canonical	3	159	junction_9	41.1107042021905	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48473725	True	NA	31	True	TATAAA	-45	NA	48476198	48482954	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
WTC11_00090571	chrX	+	1286	5	FSM	ENSG00000068438.15	ENST00000467954.5	803	5	0	-483	0	0	multi-exon	FALSE	canonical	3	159	junction_2	47.9609215924798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48481405	False	NA	16	True	ATTAAA	-20	NA	48481425	48486299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
WTC11_00090573	chrX	+	1908	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	35.7305829257377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATACAATTTGTTAT	48507788	True	NA	-31	True	NA	NA	NA	48508953	48520761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00090574	chrX	+	754	6	FSM	ENSG00000102312.24	ENST00000528612.5	745	6	-9	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	30.7349963396777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACAGCCTTCGAGGC	48507836	True	NA	NA	False	NA	NA	NA	48509001	48512719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588
WTC11_00090576	chrX	+	1850	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	-8	6	0	0	multi-exon	FALSE	canonical	3	16	junction_6	40.8987782112326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507828	True	NA	16	True	AATAAA	-17	NA	48508993	48520808	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00090578	chrX	+	1682	13	FSM	ENSG00000102312.24	ENST00000361988.7	1672	13	-10	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	27.9199003102327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGGGGGATGCTTGGG	48507864	True	NA	-98	True	NA	NA	NA	48509029	48520694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00090579	chrX	+	2113	12	FSM	ENSG00000102312.24	ENST00000491243.5	2112	12	-1	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	32.3204512692495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	48507864	True	NA	14	True	AATAAA	-15	NA	48509029	48520806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00090580	chrX	+	2260	12	FSM	ENSG00000102312.24	ENST00000537758.6	2260	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	23.6328668742117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	48508068	False	NA	4	True	AATAAA	-5	NA	48509233	48520796	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00090582	chrX	+	1188	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	-121	-271	-115	0	multi-exon	FALSE	canonical	3	72	junction_1	343.124157558164	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	48521658	False	NA	9	True	AATAAA	-10	NA	48521683	48528710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
WTC11_00090583	chrX	+	1019	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	-115	0	-115	0	multi-exon	FALSE	canonical	3	58	junction_1	349.160690084093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	48521658	False	NA	9	True	AATAAA	-10	NA	48521683	48528710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
WTC11_00090584	chrX	+	1134	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	-9	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	242.846659437597	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514397	True	NA	15	True	AATAAA	-16	NA	48521798	48528716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
WTC11_00090586	chrX	+	3856	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	-71	0	-71	0	multi-exon	FALSE	canonical	3	32	junction_2	7.8587530817554	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	48538466	True	NA	13	True	AGTAAA	-15	NA	48539642	48562609	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
WTC11_00090588	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	48.1332063710237	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	48564391	True	NA	12	True	AATAAA	-22	NA	48574483	48581162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
WTC11_00090590	chrX	+	737	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	-13	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	218.084020505859	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	48564418	True	NA	NA	False	NA	NA	NA	48574510	48577735	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
WTC11_00090593	chrX	+	1421	7	NNC	ENSG00000102317.18	novel	1130	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	217.118823074678	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTATTCTTACTCAGC	48574658	True	NA	20	True	ATTAAA	-22	NA	48574952	48578291	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48575037_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
WTC11_00090595	chrX	+	1719	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	-13	3751	-13	0	multi-exon	FALSE	canonical	3	82	junction_1	25.0338043058719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	NA	False	NA	10	True	AATAAA	-20	NA	48597478	48605118	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
WTC11_00090598	chrX	+	2137	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	108	junction_1	16.4620776331543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	NA	False	NA	25	True	NA	NA	NA	48597478	48605193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
WTC11_00090599	chrX	+	2486	8	FSM	ENSG00000101940.18	ENST00000479279.5	2486	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	9.60229564388918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48597615	False	NA	25	True	NA	NA	NA	48597808	48605193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
WTC11_00090601	chrX	+	2886	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	-158	8	-158	-2	multi-exon	FALSE	canonical	3	83	junction_5	15.357083056362	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAACCAAGATGTGAG	48696519	True	NA	NA	False	AATAAA	-14	NA	48696575	48709008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
WTC11_00090603	chrX	+	556	7	FSM	ENSG00000094631.21	ENST00000423941.5	583	7	27	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	60.2616978040133	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCACAGGTGAAGGCTT	48801337	True	NA	NA	False	NA	NA	NA	48801403	48805661	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48801432_48801873_48801945_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
WTC11_00090604	chrX	+	2155	7	NIC	ENSG00000094631.21	novel	583	7	NA	NA	28	1	intron_retention	FALSE	canonical	1	2	junction_1	59.771091117139	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGGTGTACATTTTTT	48801357	True	NA	3	True	AATAAA	-17	NA	48801423	48806960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48801752_48801873_48801945_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
WTC11_00090605	chrX	+	907	8	FSM	ENSG00000094631.21	ENST00000376643.6	907	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	42.6380112106557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCTACAGCATTTG	48801633	False	NA	NA	False	GGGGCT	-30	NA	48801699	48806706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48801945_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
WTC11_00090606	chrX	+	736	8	FSM	ENSG00000094631.21	ENST00000376610.6	736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	44.7099495843681	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCTACAGCATTTG	48801929	False	NA	NA	False	GGGGCT	-30	NA	48801948	48806706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802023_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
WTC11_00090608	chrX	+	4142	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	-24	0	9	0	multi-exon	FALSE	canonical	3	63	junction_1	28.4906671077547	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800482	True	NA	28	True	AATAAA	-19	NA	48802042	48824976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00090609	chrX	+	4844	28	FSM	ENSG00000094631.21	ENST00000477528.5	4832	28	-12	0	9	0	multi-exon	FALSE	canonical	3	63	junction_1	29.0103335262309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTTTTTGACTTTGAG	48800482	True	NA	34	True	AATAAA	-25	NA	48802042	48824982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00090610	chrX	+	4099	29	FSM	ENSG00000094631.21	ENST00000643374.1	4099	29	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	33.912627832868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGCTGTTAAAAAA	48800598	True	NA	8	True	NA	NA	NA	48802158	48824956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00090624	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	151.58548743201	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
WTC11_00090625	chrX	+	1056	7	ISM	ENSG00000102103.18	ENST00000651767.1	1951	8	7715	-37	0	0	3prime_fragment	FALSE	canonical	3	30	junction_1	130.610957512079	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48898094_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
WTC11_00090628	chrX	+	666	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	-2	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	137.350063705846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889778	True	NA	24	True	AATAAA	-25	NA	48897937	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
WTC11_00090629	chrX	+	1428	6	FSM	ENSG00000102103.18	ENST00000218224.9	1428	6	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	44.8526476364551	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889778	True	NA	24	True	AATAAA	-25	NA	48897937	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
WTC11_00090630	chrX	+	963	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	-14	-11	0	11	multi-exon	FALSE	canonical	3	265	junction_1	54.8171201967658	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTGAGGCTGCCCAAC	48889778	True	NA	36	True	AATAAA	-37	NA	48897937	48903154	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
WTC11_00090631	chrX	+	1011	7	NNC	ENSG00000102103.18	novel	1028	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	147.339460656902	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889783	True	NA	24	True	AATAAA	-25	NA	48897942	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902734_48902796_48902927
WTC11_00090632	chrX	+	808	7	NIC	ENSG00000102103.18	novel	938	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	129.778550701656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889788	True	NA	24	True	AATAAA	-25	NA	48897947	48903142	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
WTC11_00090633	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	142.442581024386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	48889836	True	NA	-20	True	NA	NA	NA	48897995	48903098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
WTC11_00090635	chrX	+	1012	5	FSM	ENSG00000102103.18	ENST00000470059.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	45.7329203091165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCGGCCTCCCTGGCCC	48898497	True	NA	-34	True	NA	NA	NA	48898509	48903084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898577_48901189_48901302_48901929_48902043_48902232_48902796_48902927
WTC11_00090636	chrX	+	406	1	FSM	ENSG00000279155.1	ENST00000624323.1	817	1	-6	417	-6	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTAGGGTCTTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	48939985	48940391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48940000_48940400
WTC11_00090637	chrX	+	4152	10	FSM	ENSG00000147144.13	ENST00000597275.5	2752	10	-7	-1393	-7	0	multi-exon	FALSE	canonical	2	11	junction_2	10.3899286467209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	49052737	True	NA	8	True	AATAAA	-17	NA	49053564	49069857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49053878_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
WTC11_00090638	chrX	+	2415	10	FSM	ENSG00000147144.13	ENST00000496529.6	2415	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.4998765426002	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCGGGAGGAAGGGAC	49058672	True	NA	NA	False	NA	NA	NA	49058965	49068339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49059060_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
WTC11_00090640	chrX	+	498	5	NNC	ENSG00000102007.11	novel	1103	5	NA	NA	-71	-538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.1889403475014	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCCTCATTTCTCTCT	49170413	True	NA	NA	False	NA	NA	NA	49171826	49174697	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_49171959_49173128_49173282_49173387_49173484_49174334_49174426_49174671
WTC11_00090641	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.63068014212911	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	49170484	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
WTC11_00090642	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_5	9.11643433585741	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	49234753	True	NA	17	True	AATAAA	-18	NA	49235469	49250520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
WTC11_00090643	chrX	+	3540	4	FSM	ENSG00000049769.14	ENST00000055335.11	3477	4	16	-79	16	79	multi-exon	FALSE	canonical	3	29	junction_3	11.5181016954473	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGATGCCTTTCTGAA	49269299	True	NA	NA	False	AAGAAA	-26	NA	49269808	49288169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49270874_49281405_49281462_49281980_49282064_49285833
WTC11_00090644	chrX	+	3109	1	FSM	ENSG00000270012.1	ENST00000602455.1	2715	1	-430	36	-430	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGCAGGTGCTCAATAA	49272602	False	NA	NA	False	NA	NA	NA	49272623	49275732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49272600_49275700
WTC11_00090645	chrX	+	474	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	2	11	2	-5	multi-exon	FALSE	canonical	2	7	junction_4	4.26468052730799	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGTCATGCGTGTCT	49829156	True	NA	0	True	AATAAA	-15	NA	49829261	49833962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
WTC11_00090646	chrX	+	9863	15	FSM	ENSG00000171365.17	ENST00000376091.8	9863	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.42380775883346	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCTGGTGTGTTT	49921801	True	NA	6	True	AATAAA	-16	NA	49922595	50099230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49922793_49923406_49923483_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
WTC11_00090647	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	51330426	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51333460_51336238
WTC11_00090648	chrX	+	386	1	FSM	ENSG00000187690.4	ENST00000342995.4	1896	1	1278	232	1278	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGGTCTCCCAAAGTTC	51408209	False	NA	NA	False	NA	NA	NA	51408225	51408611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51408200_51408600
WTC11_00090649	chrX	+	1659	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	-50	11	-50	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGGAAACTATGTGTG	NA	False	NA	NA	False	AGTAAA	-4	NA	51710461	51712120	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51710500_51712100
WTC11_00090650	chrX	+	2188	2	Genic_Genomic	ENSG00000189369.9	novel	2791	1	NA	NA	-37	3	multi-exon	FALSE	canonical	2	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTCAGGCCGTCTTTAT	51742186	True	NA	23	True	AATAAA	-39	NA	51743404	51746235	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_51743928_51744570
WTC11_00090651	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	51742223	True	NA	20	True	AATAAA	-36	NA	51743441	51746232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51743400_51746200
WTC11_00090652	chrX	+	2686	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	15	0	15	0	multi-exon	FALSE	canonical	3	154	junction_1	237.329397790403	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51801244	True	NA	13	True	AATAAA	-21	NA	51803021	51902354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
WTC11_00090653	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	121.828060761423	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51884992	True	NA	13	True	AATAAA	-21	NA	51893622	51902354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
WTC11_00090654	chrX	+	2891	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	-16	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	345.82228565325	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51884992	True	NA	13	True	AATAAA	-21	NA	51893622	51902354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
WTC11_00090655	chrX	+	950	3	FSM	ENSG00000179222.18	ENST00000473931.1	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51898592	True	NA	13	True	AATAAA	-21	NA	51898610	51902354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51898644_51900181_51900297_51901552
WTC11_00090656	chrX	+	2548	14	NNC	ENSG00000154545.17	novel	2495	13	NA	NA	-37	0	intron_retention	TRUE	canonical	3	29	junction_1	454.788786401651	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184838	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_52184966_52185831_52186133_52186396_52186716_52186825_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
WTC11_00090657	chrX	+	2549	13	FSM	ENSG00000154545.17	ENST00000471932.6	2537	13	-12	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	177.320390348469	7053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184875	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
WTC11_00090658	chrX	+	2507	13	FSM	ENSG00000154545.17	ENST00000498483.5	2483	13	-24	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	263.602749838127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
WTC11_00090659	chrX	+	2519	13	FSM	ENSG00000154545.17	ENST00000375626.7	2495	13	-24	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	354.820484736844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
WTC11_00090660	chrX	+	3020	12	FSM	ENSG00000154545.17	ENST00000477634.5	2996	12	-24	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	414.642412903591	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185831_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
WTC11_00090664	chrX	+	2129	4	FSM	ENSG00000179304.18	ENST00000612188.4	776	4	-410	-943	-45	0	multi-exon	FALSE	canonical	3	15	junction_1	52.2196216846588	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52896895	52908556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52897410_52899467_52899542_52900567_52900661_52907108
WTC11_00090665	chrX	+	3746	3	FSM	ENSG00000179304.18	ENST00000416841.8	3757	3	11	0	11	0	multi-exon	FALSE	canonical	3	121	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52897340	52908560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52899542_52900567_52900661_52907108
WTC11_00090666	chrX	+	3001	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	-59	0	11	0	multi-exon	FALSE	canonical	3	82	junction_1	20.8326666559997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52897340	52908556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
WTC11_00090667	chrX	+	2607	4	FSM	ENSG00000184205.14	ENST00000553557.5	2607	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	61.2118361829548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGAAAAAGCATTCTG	53081123	True	NA	NA	False	NA	NA	NA	53082366	53086413	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084531_53084867_53084953_53085100_53085226
WTC11_00090668	chrX	+	2814	7	FSM	ENSG00000184205.14	ENST00000375442.8	2815	7	0	1	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.7791327510265	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCCGCTTCGAGTCTT	53081123	True	NA	15	True	AATAAA	-16	NA	53082366	53088539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
WTC11_00090669	chrX	+	1782	6	FSM	ENSG00000184205.14	ENST00000578306.5	966	6	-712	-104	-86	0	multi-exon	FALSE	non_canonical	0	0	junction_1	57.0108761553443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTGAAGACAATAACAAGAA	NA	False	NA	NA	False	NA	NA	NA	53082280	53085943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084531_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630
WTC11_00090670	chrX	+	4178	2	FSM	ENSG00000184205.14	ENST00000556808.1	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCCGCTTCGAGTCTT	53083095	False	NA	15	True	AATAAA	-16	NA	53083122	53088539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084544
WTC11_00090671	chrX	+	722	4	FSM	ENSG00000184205.14	ENST00000463525.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	18.6964048831735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTGAAGACAATAACAAGAA	53084671	False	NA	NA	False	NA	NA	NA	53084698	53085943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53084867_53084953_53085100_53085226_53085322_53085630
WTC11_00090672	chrX	+	991	3	FSM	ENSG00000232593.7	ENST00000604062.6	4251	3	79	3181	38	522	multi-exon	FALSE	canonical	2	3	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAACAATGTCTCCTTTT	53093104	False	NA	NA	False	CATAAA	-31	NA	53094226	53124264	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53094285_53099471_53099609_53123468
WTC11_00090673	chrX	+	1641	2	NNC	ENSG00000232593.7	novel	4343	4	NA	NA	36912	-2380	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCAGGTGTGCTGCT	NA	False	NA	NA	False	AATAAA	-10	NA	53131100	53168534	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_53131128_53166920
WTC11_00090674	chrX	+	1949	5	FSM	ENSG00000158423.17	ENST00000457095.5	1949	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.64005494464026	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCGGCCATATTTCTCTG	53422786	True	NA	NA	False	NA	NA	NA	53422889	53429828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282
WTC11_00090675	chrX	+	425	1	FSM	ENSG00000235916.1	ENST00000455300.1	423	1	-2	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATCACATTACCACCA	NA	False	NA	NA	False	NA	NA	NA	53825884	53826309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53825900_53826300
WTC11_00090676	chrX	+	4099	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	1249	junction_1	30.7652401258303	5606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	54426516	True	NA	NA	False	AATAAA	-25	NA	54440380	54448032	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
WTC11_00090677	chrX	+	8699	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	-15	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.397132284883	12093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	54522093	True	NA	NA	False	AATAAA	-26	NA	54530203	54567289	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
WTC11_00090678	chrX	+	9213	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	-7	-6849	0	631	multi-exon	FALSE	canonical	3	41	junction_4	8.38941131559433	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGCATTCCTGTGATA	54522093	True	NA	NA	False	AATAAA	-31	NA	54530203	54567920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
WTC11_00090679	chrX	+	2637	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	1	0	1	0	multi-exon	FALSE	canonical	1	3	junction_16	14.4826134986058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	54522073	True	NA	-33	True	NA	NA	NA	54530183	54621521	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
WTC11_00090680	chrX	+	2362	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	87	-383	-59	62	multi-exon	TRUE	canonical	3	757	junction_1	221.898867590658	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTTCCACCTCAGTC	NA	False	NA	87	True	TTTAAA	-14	NA	54807685	54816077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
WTC11_00090681	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	213.158196339401	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54800603	True	NA	25	True	ATTAAA	-19	NA	54807744	54816015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
WTC11_00090682	chrX	+	2143	14	NNC	ENSG00000102316.17	novel	2051	13	NA	NA	-59	1090	intron_retention	FALSE	non_canonical	0	0	junction_13	417.306125484474	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCAGGGCAGTGACTGG	NA	False	NA	NA	False	AAAAAG	-6	NA	54807685	54817105	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816011_54817067
WTC11_00090683	chrX	+	2343	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	-2	-383	-2	62	multi-exon	FALSE	canonical	3	570	junction_1	270.114484451952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTTCCACCTCAGTC	54801194	False	NA	87	True	TTTAAA	-14	NA	54808335	54816077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
WTC11_00090684	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	258.923559612142	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	54803409	True	NA	17	True	ATTAAA	-11	NA	54808370	54816007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
WTC11_00090685	chrX	+	2083	14	NNC	ENSG00000102316.17	novel	2048	13	NA	NA	0	1084	intron_retention	FALSE	non_canonical	0	0	junction_13	437.132763876649	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACAGGACCAGGGCAGT	54803409	True	NA	NA	False	NA	NA	NA	54808370	54817099	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816011_54817067
WTC11_00090686	chrX	+	2409	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	-383	0	62	multi-exon	FALSE	canonical	3	130	junction_1	389.332783783906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTTCCACCTCAGTC	54806994	True	NA	87	True	TTTAAA	-14	NA	54809059	54816077	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
WTC11_00090691	chrX	+	284	1	FSM	ENSG00000221716.1	ENST00000408789.1	128	1	7	-163	7	163	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGGACTATGCCAGAG	54814348	False	NA	NA	False	AATAAA	-24	NA	54814376	54814660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54814400_54814700
WTC11_00090693	chrX	+	727	2	FSM	ENSG00000067445.22	ENST00000453081.5	722	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGTCATTACCCAGAT	54916843	True	NA	NA	False	TTTAAA	-2	NA	54920805	54922856	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202
WTC11_00090694	chrX	+	733	2	FSM	ENSG00000067445.22	ENST00000452830.5	976	2	243	0	-5	0	multi-exon	FALSE	canonical	3	231	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGCTTTACCTACCAC	54916843	True	NA	NA	False	TTTAAA	-23	NA	54920805	54922877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922217
WTC11_00090697	chrX	+	4635	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	-5	0	intron_retention	TRUE	canonical	3	231	junction_1	31.4479287429589	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916843	True	NA	NA	False	ATTAAA	-12	NA	54920805	54931429	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
WTC11_00090698	chrX	+	4652	13	FSM	ENSG00000067445.22	ENST00000173898.12	4634	13	-18	0	-5	0	multi-exon	FALSE	canonical	3	70	junction_1	67.8995888549162	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916843	True	NA	NA	False	ATTAAA	-14	NA	54920805	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
WTC11_00090699	chrX	+	2316	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	-10	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_12	86.8144573213471	13966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916843	True	NA	NA	False	ATTAAA	-14	NA	54920805	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
WTC11_00090700	chrX	+	2331	13	FSM	ENSG00000067445.22	ENST00000319167.12	2326	13	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_12	102.582047108102	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916843	True	NA	NA	False	ATTAAA	-14	NA	54920805	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
WTC11_00090701	chrX	+	2607	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	-10	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_12	83.5108326601863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916843	True	NA	NA	False	ATTAAA	-14	NA	54920805	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
WTC11_00090705	chrX	+	3257	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	-20	2	-20	-2	multi-exon	FALSE	canonical	3	169	junction_4	9.26066952223218	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTTTGTGCTTTATT	54997864	True	NA	1	True	AATAAA	-12	NA	55000342	55009055	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
WTC11_00090706	chrX	+	1741	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	-1013	0	1013	multi-exon	FALSE	canonical	3	8	junction_2	73.3974624901979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGCACTTTGGACATT	54997914	True	NA	29	True	AATAAA	-18	NA	55000392	55007770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
WTC11_00090707	chrX	+	1464	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	-24	0	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	55451157	True	NA	16	True	AATAAA	-17	NA	55452102	55453566	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55452100_55453600
WTC11_00090708	chrX	+	634	7	FSM	ENSG00000083750.13	ENST00000414239.5	644	7	10	0	10	0	multi-exon	FALSE	canonical	2	2	junction_1	19.6079632349263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGAAGTACTTCTTTT	55716873	True	NA	NA	False	AATGAA	-29	NA	55717758	55753475	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55717789_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391
WTC11_00090709	chrX	+	2054	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	-3	0	-3	0	multi-exon	FALSE	canonical	2	23	junction_6	11.8883696667513	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716860	True	NA	NA	False	AATAAA	-17	NA	55717745	55758774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
WTC11_00090712	chrX	+	1084	3	FSM	ENSG00000227486.3	ENST00000666613.1	1156	3	72	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGGACTTCCTGAAGT	55907972	True	NA	21	True	AATAAA	-39	NA	55908224	56015193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_56002824_56002984_56014844
WTC11_00090713	chrX	+	1625	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	-2	-667	-2	2	multi-exon	FALSE	canonical	1	4	junction_2	4	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAAAGAGGTTTAATT	55907988	True	NA	NA	False	AATAAA	-26	NA	55908240	56205920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_56014844_56014962_56204972
WTC11_00090714	chrX	+	9048	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	48	0	-17	0	multi-exon	TRUE	canonical	3	13	junction_1	3.31058907144937	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	56231962	True	NA	9	True	AATAAA	-21	NA	56232403	56291531	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
WTC11_00090715	chrX	+	4242	1	FSM	ENSG00000188021.9	ENST00000338222.7	4242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	582	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTTGTTTCTCATT	56560147	True	NA	2	True	AATAAA	-14	NA	56563626	56567868	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56563600_56567900
WTC11_00090716	chrX	+	2346	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	-2	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	88	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	56723827	True	NA	NA	False	AATAAA	-1	NA	56729240	56819179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56729590_56732062_56732200_56817319
WTC11_00090717	chrX	+	557	2	FSM	ENSG00000226310.2	ENST00000439622.2	1824	2	142	1125	142	-1125	multi-exon	FALSE	canonical	2	2	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTCCCATATCAGGA	57121504	True	NA	NA	False	AATACA	-22	NA	57121758	57127232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_57121968_57126884
WTC11_00090720	chrX	+	2002	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	-22	0	-22	0	multi-exon	FALSE	canonical	3	34	junction_7	6.3718129288296	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	NA	False	NA	4	True	AATAAA	-16	NA	57286683	57489193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
WTC11_00090721	chrX	+	383	4	FSM	ENSG00000165591.7	ENST00000465623.1	383	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	21.1712593442672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGATGAACAGCATTGG	NA	False	NA	NA	False	NA	NA	NA	57431997	57452166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_57432038_57446927_57447040_57448523_57448719_57452130
WTC11_00090722	chrX	+	5467	1	FSM	ENSG00000198455.5	ENST00000374888.3	5467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCTGTGACTTCATT	NA	False	NA	10	True	AATAAA	-20	NA	57592010	57597477	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_57592000_57597500
WTC11_00090724	chrX	+	589	1	FSM	ENSG00000228158.2	ENST00000422965.1	589	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGATTAGGACTTTG	65407776	False	NA	NA	False	NA	NA	NA	65408083	65408672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_65408100_65408700
WTC11_00090725	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_9	63.3052569345987	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	65656063	True	NA	16	True	AATAAA	-17	NA	65667653	65741931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
WTC11_00090726	chrX	+	4152	19	NIC	ENSG00000089472.18	novel	4431	21	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_15	38.2146310291145	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	66162342	True	NA	14	True	ATTAAA	-16	NA	66164186	66267383	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66258839_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00090727	chrX	+	4431	21	FSM	ENSG00000089472.18	ENST00000343002.7	4431	21	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	22.9112963404518	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	66162402	True	NA	20	True	ATTAAA	-22	NA	66164246	66267389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00090728	chrX	+	4455	21	FSM	ENSG00000089472.18	ENST00000441993.7	4310	21	-166	21	-24	0	multi-exon	FALSE	canonical	3	49	junction_20	34.7250269978297	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTACTTGTTAGAAC	66162348	True	NA	-7	True	NA	NA	NA	66164192	66267362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266442
WTC11_00090729	chrX	+	4228	20	FSM	ENSG00000089472.18	ENST00000684071.1	4854	20	626	0	626	0	multi-exon	FALSE	canonical	3	126	junction_4	22.77920030991	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACTGAATTTGGTGAT	66168688	False	NA	16	True	ATTAAA	-18	NA	66170532	66267385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00090730	chrX	+	2919	18	FSM	ENSG00000089472.18	ENST00000684603.1	2919	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	45.975847427892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTCTTTGCTCTACGTG	66173778	False	NA	26	True	NA	NA	NA	66173793	66266860	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197811_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00090731	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	130.466240844136	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	68498587	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
WTC11_00090732	chrX	+	6539	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	-545	16	-56	0	multi-exon	FALSE	canonical	3	300	junction_6	22.0812892135702	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	68498311	True	NA	2	True	ATTAAA	-10	NA	68498505	68537266	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
WTC11_00090733	chrX	+	1277	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	-543	0	-56	0	multi-exon	FALSE	canonical	3	23	junction_1	122.088424239702	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	68498311	True	NA	-61	True	NA	NA	NA	68498505	68531970	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
WTC11_00090734	chrX	+	4832	14	FSM	ENSG00000130052.14	ENST00000374597.3	4820	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	15	junction_2	4.4229096958354	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTAACTGTGTGGCTG	68693101	True	NA	3	True	AATAAA	-15	NA	68693638	68725833	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68693827_68712913_68712986_68715293_68715376_68716367_68716432_68717211_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
WTC11_00090735	chrX	+	499	1	ISM	ENSG00000213740.2	ENST00000396021.2	1160	2	953	143	953	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGGCCGCCCAGGACCT	NA	False	NA	NA	False	NA	NA	NA	68784424	68784923	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_68784400_68784900
WTC11_00090736	chrX	+	3303	5	FSM	ENSG00000090776.6	ENST00000204961.5	3303	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	7.22841614740048	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTGTAAAATGGTG	68828445	True	NA	81	True	ACTAAA	-23	NA	68829020	68842160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68829905_68838616_68838895_68839663_68839757_68839959_68840089_68840241
WTC11_00090737	chrX	+	4939	3	FSM	ENSG00000130054.5	ENST00000252338.5	4928	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	37	junction_2	3	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCCTTCATGGCTTTGT	69502932	True	NA	14	True	AATAAA	-20	NA	69504314	69532508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69506144_69528992_69529165_69529570
WTC11_00090738	chrX	+	1258	1	FSM	ENSG00000158813.18	ENST00000338901.4	1233	1	55	-80	5	80	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGTTCTGATTCTTAAG	69615434	True	NA	NA	False	AATAAA	-15	NA	69616121	69617379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616100_69617400
WTC11_00090739	chrX	+	5184	8	NNC	ENSG00000158813.18	novel	5235	8	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_7	3.65334624358412	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCGTGAGTACTTCCTAC	69615434	True	NA	29	True	AATAAA	-26	NA	69616121	70039472	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033487_70035357
WTC11_00090740	chrX	+	1871	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	-9	0	-7	0	multi-exon	FALSE	canonical	3	315	junction_5	11.1103555298649	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133015	True	NA	27	True	AATAAA	-33	NA	70133439	70166324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
WTC11_00090741	chrX	+	1689	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	15	junction_1	118.053660115503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133015	True	NA	27	True	AATAAA	-33	NA	70133439	70166324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
WTC11_00090742	chrX	+	4430	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	-42	0	-42	0	multi-exon	FALSE	canonical	3	163	junction_1	24.3276020647786	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	70285058	True	NA	24	True	AATAAA	-21	NA	70290061	70420886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
WTC11_00090743	chrX	+	4653	31	NIC	ENSG00000090889.12	novel	4388	31	NA	NA	-42	38	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	43.6928165974937	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCCTCCCTGCCTTAT	70285058	True	NA	62	True	NA	NA	NA	70290061	70420924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_70290336_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
WTC11_00090745	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.6892770274468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
WTC11_00090746	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.2122948389505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423052	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
WTC11_00090747	chrX	+	5087	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	-13	0	-13	0	multi-exon	FALSE	canonical	3	29	junction_1	44.6251978597705	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	70451788	True	NA	9	True	AATAAA	-21	NA	70452291	70505487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
WTC11_00090749	chrX	+	4591	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	-62	0	-62	0	multi-exon	FALSE	canonical	3	98	junction_1	19.2534208616555	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	70455018	False	NA	7	True	AATAAA	-19	NA	70455033	70505485	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
WTC11_00090751	chrX	+	333	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-34	True	NA	NA	NA	70962960	70963293	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70963000_70963300
WTC11_00090752	chrX	+	3544	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	100	0	100	0	multi-exon	FALSE	canonical	3	78	junction_1	2	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71095751	True	NA	13	True	AATAAA	-30	NA	71095950	71103532	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71096982_71100683_71101741_71102076
WTC11_00090753	chrX	+	657	3	FSM	ENSG00000184481.17	ENST00000466874.1	657	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGGGAGGCAAGAGCG	71092788	True	NA	NA	False	NA	NA	NA	71096252	71100772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71096700_71096860_71096982_71100683
WTC11_00090754	chrX	+	6975	45	FSM	ENSG00000184634.17	ENST00000374102.6	6901	45	-71	-3	2	3	multi-exon	TRUE	canonical	2	61	junction_16	20.8107866976529	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGAGTTCTGCATGT	71118538	False	NA	27	True	AATACA	-21	NA	71118557	71142453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
WTC11_00090755	chrX	+	6925	45	FSM	ENSG00000184634.17	ENST00000374080.8	6925	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_39	24.8252986798841	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	71115757	True	NA	24	True	AATACA	-18	NA	71118595	71142450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
WTC11_00090758	chrX	+	3951	7	FSM	ENSG00000196338.15	ENST00000374051.7	3913	7	-40	2	-18	0	multi-exon	FALSE	canonical	3	39	junction_2	22.0283907719107	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCCCTTGCACAG	71144787	False	NA	14	True	AATAAA	-20	NA	71144802	71171199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
WTC11_00090759	chrX	+	3881	6	FSM	ENSG00000196338.15	ENST00000536169.6	3812	6	-30	-39	-8	0	multi-exon	FALSE	canonical	3	7	junction_2	36.0133308651116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCCCTTGCACAG	71143455	True	NA	14	True	AATAAA	-20	NA	71144812	71171199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71155213_71155364_71164142_71164329_71167010_71167801_71169253
WTC11_00090760	chrX	+	4011	8	FSM	ENSG00000196338.15	ENST00000358741.4	3975	8	-38	2	-18	0	multi-exon	FALSE	canonical	3	37	junction_2	25.8622725771952	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCCCTTGCACAG	71144787	False	NA	14	True	AATAAA	-20	NA	71144802	71171199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71148845_71148906_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
WTC11_00090762	chrX	+	3041	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	-231	2	167	0	multi-exon	FALSE	canonical	3	135	junction_3	883.528563331272	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	NA	False	NA	21	True	ATTAAA	-11	NA	71283358	71301158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00090764	chrX	+	4698	9	FSM	ENSG00000147140.17	ENST00000679267.1	4678	9	-20	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	213.085076905916	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCATCAACCTATTAAAATA	71242181	True	NA	-6	True	NA	NA	NA	71283589	71301131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71298509_71298706
WTC11_00090766	chrX	+	3542	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	-363	27	55	0	multi-exon	FALSE	canonical	3	2009	junction_2	234.072723742003	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCATCAACCTATTAAAATA	NA	False	NA	-6	True	NA	NA	NA	71283246	71301131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
WTC11_00090767	chrX	+	2687	12	FSM	ENSG00000147140.17	ENST00000678437.1	2667	12	-20	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	727.228873677843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242181	True	NA	21	True	ATTAAA	-11	NA	71283589	71301158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298477_71298509_71298706_71298817_71299941
WTC11_00090769	chrX	+	3671	11	FSM	ENSG00000147140.17	ENST00000677218.1	3669	11	-2	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	952.07752310408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242224	True	NA	21	True	ATTAAA	-11	NA	71283632	71301158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71298509_71298706_71298817_71299941
WTC11_00090770	chrX	+	2670	12	FSM	ENSG00000147140.17	ENST00000678660.1	2655	12	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	732.249257566446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242224	True	NA	23	True	ATTAAA	-13	NA	71283632	71301160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290807_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00090771	chrX	+	2663	12	FSM	ENSG00000147140.17	ENST00000276079.13	2661	12	-2	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	223.726847918033	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242224	True	NA	31	True	ATTAAA	-21	NA	71283632	71301168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00090772	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	626.602776885005	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242224	True	NA	31	True	ATTAAA	-21	NA	71283632	71301168	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00090777	chrX	+	1619	10	FSM	ENSG00000147166.11	ENST00000538820.1	1439	10	-115	-65	-78	-5	multi-exon	FALSE	canonical	2	6	junction_1	1.63299316185545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATAGTGTCATTCTC	71301658	False	NA	28	True	AATAAA	-16	NA	71301671	71305366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71302187_71302276_71302334_71302410_71302557_71303261_71303357_71303460_71303517_71303626_71303698_71303811_71303912_71304186_71304301_71304541_71304605_71304964
WTC11_00090778	chrX	+	564	3	FSM	ENSG00000147166.11	ENST00000475413.1	573	3	9	0	9	0	multi-exon	FALSE	canonical	3	7	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTCACCACTCCACC	71303787	False	NA	NA	False	ATTAAA	-13	NA	71303800	71304880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71303912_71304186_71304301_71304541
WTC11_00090779	chrX	+	7628	38	FSM	ENSG00000147133.17	ENST00000423759.6	7599	38	-97	68	-4	0	multi-exon	FALSE	canonical	3	32	junction_4	13.9794799005801	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATATTGTTTGAATT	71364487	True	NA	14	True	GGGGCT	-42	NA	71366259	71465937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
WTC11_00090780	chrX	+	7836	39	FSM	ENSG00000147133.17	ENST00000683782.1	7697	39	-203	64	-68	0	multi-exon	FALSE	canonical	3	22	junction_35	14.9879914997533	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATATTGTTTGAATT	71366132	False	NA	14	True	GGGGCT	-42	NA	71366153	71465937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459149_71459252_71459551_71459709_71460625_71460804_71463823
WTC11_00090781	chrX	+	1022	6	FSM	ENSG00000147133.17	ENST00000483985.3	1022	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	17.91758912354	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGTGCATTGCTTC	71393317	False	NA	NA	False	AAGAAA	-40	NA	71393331	71406746	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71393477_71394066_71394246_71397255_71397467_71398571_71398738_71401527_71401740_71406637
WTC11_00090782	chrX	+	1077	4	NIC	ENSG00000147133.17	novel	768	5	NA	NA	28	439	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	32.782108941718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCGTGGTGAGAGGAA	NA	False	NA	NA	False	AATAAA	-41	NA	71458300	71466943	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_71458367_71459551_71459709_71460625_71460804_71466267
WTC11_00090783	chrX	+	621	2	FSM	ENSG00000147162.14	ENST00000472270.1	689	2	0	68	0	-68	multi-exon	FALSE	canonical	3	200	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGGTCTGCTGCTTT	71528758	True	NA	NA	False	NA	NA	NA	71533127	71536589	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71533337_71536177
WTC11_00090784	chrX	+	5436	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	-1	0	-1	0	multi-exon	FALSE	canonical	3	123	junction_4	57.5932645973826	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	71528733	True	NA	6	True	AATAAA	-19	NA	71533102	71575892	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
WTC11_00090786	chrX	+	593	3	FSM	ENSG00000147174.12	ENST00000471950.1	691	3	0	98	0	-98	multi-exon	FALSE	canonical	3	9	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCAGAGAAAAGTATTGC	NA	False	NA	NA	False	NA	NA	NA	71609065	71612756	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71609118_71610680_71610820_71612354
WTC11_00090787	chrX	+	2270	3	NNC	ENSG00000204131.10	novel	13633	8	NA	NA	438	-701	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	2.5	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTACCAAAAAAACCCAGCG	71909529	False	NA	NA	False	AAAAAG	-21	NA	71911282	72140556	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_71911368_72009345_72009415_72138440
WTC11_00090788	chrX	+	337	1	FSM	ENSG00000196933.5	ENST00000463445.1	348	1	96	-85	96	85	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGCCCAAGGTAATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	72044640	72044977	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72044600_72045000
WTC11_00090789	chrX	+	1323	4	FSM	ENSG00000102309.15	ENST00000664196.1	1323	4	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	127.146459731375	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATTCTTAACAGATTA	72171795	True	NA	NA	False	AATAAA	-18	NA	72181675	72198343	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
WTC11_00090790	chrX	+	1248	1	FSM	ENSG00000269911.1	ENST00000602508.1	1490	1	93	149	93	-149	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAATCATTCCCCCCCT	NA	False	NA	NA	False	NA	NA	NA	72777700	72778948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72777700_72778900
WTC11_00090791	chrX	+	526	1	FSM	ENSG00000230311.2	ENST00000427861.2	435	1	92	-183	92	183	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAATTTGATAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	73223215	73223741	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73223200_73223700
WTC11_00090792	chrX	+	1651	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_2	3.5	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	73446754	True	NA	NA	False	AATAAA	-22	NA	73447043	73455171	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73447756_73453516_73453663_73454378
WTC11_00090793	chrX	+	6749	6	FSM	ENSG00000204116.12	ENST00000373502.10	6869	6	111	9	26	0	multi-exon	FALSE	canonical	3	12	junction_5	3.72021504754766	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGAATTCTGTGTTTT	73562371	True	NA	NA	False	AATAAA	-18	NA	73563307	73687102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73679653_73679714_73680954
WTC11_00090795	chrX	+	2409	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	-86	-505	17	0	multi-exon	FALSE	canonical	3	10	junction_3	203.692906111136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATAAAACTCGCTG	NA	False	NA	14	True	AGTAAA	-26	NA	73944252	74000495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
WTC11_00090796	chrX	+	5363	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	-11	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	191.101439031735	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
WTC11_00090797	chrX	+	1275	6	FSM	ENSG00000225470.8	ENST00000660546.1	1292	6	17	0	17	0	multi-exon	FALSE	canonical	3	10	junction_3	201.630751622861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTGTTCTGGGCAA	NA	False	NA	1	True	AATATA	-13	NA	73944252	74004677	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_74004269
WTC11_00090799	chrX	+	3479	3	FSM	ENSG00000225470.8	ENST00000669149.1	3463	3	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	277.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	73937024	True	NA	NA	False	NA	NA	NA	73944325	74007529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_74004269
WTC11_00090800	chrX	+	3953	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	75	junction_4	199.857918281963	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	73944193	74007672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
WTC11_00090801	chrX	+	3771	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	-13	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	193.634248577627	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
WTC11_00090802	chrX	+	566	4	NIC	ENSG00000225470.8	novel	3758	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	79.6338844685826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAAATTGAACCATTT	73937036	True	NA	22	True	AATAAA	-34	NA	73944337	74004557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_73944415_73944583_73944663_73994839_73994962_74004269
WTC11_00090803	chrX	+	998	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-114	-274	17	0	intron_retention	FALSE	canonical	3	231	junction_2	172.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	NA	False	NA	19	True	AATAAA	-16	NA	73944252	73947704	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_73944466_73944583_73944663_73946998
WTC11_00090807	chrX	+	334	1	FSM	ENSG00000231549.1	ENST00000425964.1	177	1	-33	-124	-33	124	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACATGGAAAATTAACAAA	NA	False	NA	NA	False	AATATA	-21	NA	74173856	74174190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_74173900_74174200
WTC11_00090808	chrX	+	4128	6	FSM	ENSG00000147100.11	ENST00000587091.6	4128	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	37.9104207309811	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	74417251	True	NA	36	True	AATAAA	-16	NA	74421492	74533916	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74529212_74529442_74531332
WTC11_00090809	chrX	+	1886	4	FSM	ENSG00000147100.11	ENST00000590447.1	1886	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	126.303866396349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGACAGGTCTATAT	74521089	True	NA	NA	False	NA	NA	NA	74521119	74532608	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_74521135_74524358_74524810_74525749_74525894_74531332
WTC11_00090810	chrX	+	2234	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	-46	-1053	-15	0	multi-exon	TRUE	canonical	3	43	junction_2	44.4393647890825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75273030	True	NA	-22	True	NA	NA	NA	75274069	75304572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
WTC11_00090811	chrX	+	2254	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	-20	0	-15	0	multi-exon	FALSE	canonical	3	13	junction_6	48.8651773306468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75273030	True	NA	6	True	ATTAAA	-15	NA	75274069	75304600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
WTC11_00090812	chrX	+	2472	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	2	0	2	0	multi-exon	FALSE	canonical	3	93	junction_1	21.7670750344541	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	75273047	True	NA	NA	False	AATAAA	-32	NA	75274086	75304885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
WTC11_00090813	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	44.6081706516742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75274717	False	NA	-22	True	NA	NA	NA	75274727	75304572	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
WTC11_00090814	chrX	+	1780	7	NIC	ENSG00000094841.14	novel	730	8	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	51.3768754726612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75285357	True	NA	6	True	ATTAAA	-15	NA	75285377	75304600	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_75285525_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
WTC11_00090816	chrX	+	351	1	FSM	ENSG00000233254.1	ENST00000453468.1	483	1	-27	159	-27	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATGAAAATGATCAGAG	NA	False	NA	NA	False	NA	NA	NA	75384318	75384669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75384300_75384700
WTC11_00090817	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	258.396013901144	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	76162868	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
WTC11_00090818	chrX	+	1207	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	-22	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	26.1640975384209	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	76162868	True	NA	137	True	NA	NA	NA	76173039	76178314	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
WTC11_00090819	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	76427309	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76427700_76431300
WTC11_00090820	chrX	+	1669	3	FSM	ENSG00000196468.8	ENST00000439435.3	1666	3	2	-5	2	5	multi-exon	FALSE	canonical	3	22	junction_2	3	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAATTCTATTGATTTG	77447159	True	NA	31	True	AATAAA	-25	NA	77447390	77457283	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77447949_77454156_77454261_77456276
WTC11_00090821	chrX	+	384	4	NNC	ENSG00000131174.7	novel	605	4	NA	NA	-3494	-337	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2679.22762501932	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTATTAGATCCCAGGTG	77895876	False	NA	NA	False	NA	NA	NA	77895945	77905048	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77895976_77899460_77899594_77902642_77902768_77904952
WTC11_00090822	chrX	+	468	4	NNC	ENSG00000131174.7	novel	605	4	NA	NA	-3494	-6	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_1	2703.51627001249	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGTAGGTTTTGTT	77895876	False	NA	19	True	AATAAA	-13	NA	77895945	77905379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77895976_77899476_77899594_77902642_77902768_77905183
WTC11_00090823	chrX	+	467	4	NNC	ENSG00000131174.7	novel	605	4	NA	NA	-3494	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2643.04992175496	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGTAGGTTTTGTT	77895876	False	NA	19	True	AATAAA	-13	NA	77895945	77905379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77895976_77899476_77899594_77902642_77902767_77905183
WTC11_00090824	chrX	+	464	4	NNC	ENSG00000131174.7	novel	605	4	NA	NA	-3494	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	2641.08513052243	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGTAGGTTTTGTT	77895876	False	NA	19	True	AATAAA	-13	NA	77895945	77905379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77895976_77899476_77899594_77902642_77902768_77905187
WTC11_00090825	chrX	+	468	4	NNC	ENSG00000131174.7	novel	605	4	NA	NA	-3494	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	2641.82146759895	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGTAGGTTTTGTT	77895876	False	NA	19	True	AATAAA	-13	NA	77895945	77905379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77895976_77899476_77899594_77902642_77902772_77905187
WTC11_00090827	chrX	+	2466	3	FSM	ENSG00000131174.7	ENST00000650309.2	2444	3	-22	0	6	0	multi-exon	FALSE	canonical	3	5686	junction_1	200.5	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGTCACTGAATTAAC	77874848	True	NA	29	True	AATAAA	-38	NA	77899445	77907376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77902642_77902768_77905183
WTC11_00090829	chrX	+	505	3	FSM	ENSG00000131174.7	ENST00000647835.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	2943.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCTTCTTAAATAGG	77874887	True	NA	101	True	ATTAAA	-10	NA	77899484	77905461	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77902649_77902768_77905183
WTC11_00090830	chrX	+	1882	6	FSM	ENSG00000165240.22	ENST00000693051.1	2198	6	-8	324	-8	-314	multi-exon	FALSE	canonical	3	8	junction_4	2.28035085019828	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAGATTTTTTGTGT	77910189	True	NA	NA	False	NA	NA	NA	77910681	78003236	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77910836_77971620_77971762_77988241_77988732_77989232_77989959_77998477_77998685_78003072
WTC11_00090831	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	6118	junction_7	297.033331462986	2892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	78054768	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
WTC11_00090832	chrX	+	960	2	FSM	ENSG00000102144.15	ENST00000476531.1	960	2	0	0	0	0	multi-exon	FALSE	canonical	3	6969	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGATTTTTTTTTTTTTC	78124586	True	NA	20	True	AATAAA	-15	NA	78124943	78126267	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78125426_78125789
WTC11_00090833	chrX	+	694	4	FSM	ENSG00000147145.14	ENST00000514744.5	672	4	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.85861230093008	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTATTCATCTTGG	78746894	True	NA	NA	False	NA	NA	NA	78747708	78755006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78748035_78750173_78750224_78751209_78751312_78754790
WTC11_00090835	chrX	+	4465	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	-11	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	1.29903810567666	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCAGTCATACTTTGAT	78746894	True	NA	13	True	AATAAA	-15	NA	78747708	78758714	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
WTC11_00090836	chrX	+	415	2	FSM	ENSG00000122145.15	ENST00000476373.1	506	2	91	0	91	0	multi-exon	TRUE	canonical	2	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTCTCTCCTACAT	NA	False	NA	NA	False	NA	NA	NA	80014859	80022654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80014888_80022267
WTC11_00090837	chrX	+	1024	1	FSM	ENSG00000073905.8	ENST00000439229.2	848	1	-9	-167	-9	167	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAGAAACGCATTTCC	NA	False	NA	NA	False	NA	NA	NA	80929490	80930514	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80929500_80930500
WTC11_00090838	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	7.1336448530109	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	81198207	True	NA	12	True	AATAAA	-23	NA	81202101	81298547	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
WTC11_00090839	chrX	+	3825	1	FSM	ENSG00000196767.9	ENST00000644024.2	3838	1	3	10	3	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAAGTTTTCTTCT	83508045	True	NA	NA	False	AATAAA	-10	NA	83508292	83512117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_83508300_83512100
WTC11_00090840	chrX	+	6483	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_1	7.46240577829965	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	85001546	True	NA	13	True	AATAAA	-18	NA	85003873	85093315	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
WTC11_00090841	chrX	+	4917	10	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_2	40.1414166831881	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85246023_85246929_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
WTC11_00090842	chrX	+	4559	11	FSM	ENSG00000147180.17	ENST00000674551.1	4559	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	48.5408075746583	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85244192_85245902_85246023_85246929_85247189_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
WTC11_00090843	chrX	+	4162	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	-41	3	0	0	multi-exon	FALSE	canonical	3	78	junction_2	25.228641957109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
WTC11_00090845	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.31487853899762	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	86147740	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
WTC11_00090846	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	11.9753914341035	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	87516214	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
WTC11_00090847	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.9723627662693	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
WTC11_00090848	chrX	+	8120	7	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	1	3299	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	3.5939764421413	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTAGTTTGTGTTTA	91774803	True	NA	6	True	AATAAA	-20	NA	91779375	91887306	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
WTC11_00090850	chrX	+	451	3	Antisense	novelGene_ENSG00000289479.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAATCATTCTTATTAGT	NA	False	NA	NA	False	NA	NA	NA	92098635	92105928	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_92098662_92100275_92100575_92105802
WTC11_00090852	chrX	+	1241	1	FSM	ENSG00000215089.3	ENST00000435214.1	1283	1	15	27	15	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACACCAAAGTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	92459684	92460925	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_92459700_92460900
WTC11_00090853	chrX	+	4771	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCACACAAAGCCTGTT	NA	False	NA	9	True	AATAAA	-9	NA	92824525	92829296	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_92824500_92829300
WTC11_00090854	chrX	+	228	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTAGGAAGGAAAGGAGT	94700720	False	NA	NA	False	NA	NA	NA	94700787	94701015	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94700800_94701000
WTC11_00090855	chrX	+	585	2	Antisense	novelGene_ENSG00000231001.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGTGGGCGGATCA	NA	False	NA	NA	False	NA	NA	NA	94762915	94851853	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_94762997_94851349
WTC11_00090856	chrX	+	3705	28	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	139.35289405295	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCATTTTGTCTGGTG	96684698	False	NA	14	True	AGTAAA	-19	NA	96684756	97469834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00090857	chrX	+	1456	1	FSM	ENSG00000204086.4	ENST00000373040.4	1560	1	26	78	26	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGCTTCTTTTTCCA	NA	False	NA	NA	False	AAGAAA	-36	NA	96883933	96885389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96883900_96885400
WTC11_00090858	chrX	+	800	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625735	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	226.29273077145	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302595	True	NA	15	True	AGTAAA	-20	NA	97310576	97469835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00090859	chrX	+	6058	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625735	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	218.180353530437	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTGCTGCCTATGATA	97302595	True	NA	5	True	AATAAA	-18	NA	97310576	97604996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97599252
WTC11_00090860	chrX	+	651	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625740	0	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_1	117.086506481319	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302600	True	NA	15	True	AGTAAA	-20	NA	97310581	97469835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00090861	chrX	+	548	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTGAATTCTGAGAAGG	98524823	False	NA	NA	False	NA	NA	NA	98524837	98525385	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_98524800_98525400
WTC11_00090862	chrX	+	1208	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8689	4	1	-4	3prime_fragment	FALSE	canonical	3	18	junction_3	5.40832691319598	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGCCTGATTGCTGCT	100593354	True	NA	2	True	AATAAA	-15	NA	100593624	100599881	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
WTC11_00090863	chrX	+	2586	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	-16	0	-16	0	multi-exon	FALSE	canonical	3	262	junction_7	28.094304419729	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	100815520	True	NA	NA	False	AATAAA	-18	NA	100820374	100841520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
WTC11_00090864	chrX	+	2045	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	29	0	-3	0	multi-exon	FALSE	canonical	2	4	junction_8	115.907972820101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	100815533	True	NA	27	True	AATAAA	-27	NA	100820387	100840932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
WTC11_00090866	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	101078479	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101079123_101094572
WTC11_00090870	chrX	+	5598	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	-14	0	1	0	multi-exon	FALSE	canonical	3	24	junction_1	7.74069553379661	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	101095786	True	NA	10	True	AATAAA	-20	NA	101098189	101166126	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
WTC11_00090871	chrX	+	3314	21	NIC	ENSG00000102384.14	novel	5584	22	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	25	junction_1	6.81469001496033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCAGAAGGAATTCTGAA	101095811	True	NA	36	True	AATAAA	-16	NA	101098214	101163672	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
WTC11_00090873	chrX	+	893	5	FSM	ENSG00000241343.10	ENST00000427805.6	910	5	17	0	17	0	multi-exon	FALSE	canonical	3	5778	junction_4	1234.79580801848	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTTAATTTAATAAAGAA	NA	False	NA	-32	True	NA	NA	NA	101390840	101396117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
WTC11_00090874	chrX	+	721	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	-322	0	0	multi-exon	FALSE	canonical	3	145	junction_1	3501.47561750757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTTAATTTAATAAAGAA	101391184	False	NA	-32	True	NA	NA	NA	101391201	101396117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
WTC11_00090876	chrX	+	2262	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	-22	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	891.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	101305395	True	NA	-5	True	AAAAAG	-9	NA	101390988	101393852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754
WTC11_00090877	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	732.126127567284	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	101305395	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
WTC11_00090879	chrX	+	863	4	FSM	ENSG00000241343.10	ENST00000465744.5	710	4	169	-322	81	0	multi-exon	FALSE	canonical	3	5778	junction_3	1408.19340527737	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTTAATTTAATAAAGAA	101391267	False	NA	-32	True	NA	NA	NA	101391282	101396117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391565_101391754_101391823_101395334_101395458_101395727
WTC11_00090881	chrX	+	2312	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	837	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	101396914	True	NA	26	True	AATAAA	-26	NA	101408205	101414133	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101408320_101411935
WTC11_00090882	chrX	+	2284	2	NNC	ENSG00000126945.9	novel	2296	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_1	0	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	101396930	True	NA	26	True	AATAAA	-26	NA	101408221	101414133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_101408308_101411935
WTC11_00090883	chrX	+	421	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	-18	0	-7	0	multi-exon	FALSE	canonical	3	8	junction_3	5.8878405775519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	101417049	True	NA	NA	False	NA	NA	NA	101418279	101446132	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
WTC11_00090884	chrX	+	7419	2	ISM	ENSG00000196440.12	ENST00000423738.5	7729	6	2588	1	2569	-1	3prime_fragment	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATTGTCCTTGTCCTTG	101488033	False	NA	21	True	AATAAA	-27	NA	101488043	101495806	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_101488100_101488443
WTC11_00090885	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	19.6129209111409	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546941	True	NA	NA	False	AATAAA	-30	NA	101550546	101554700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
WTC11_00090886	chrX	+	1117	1	FSM	ENSG00000204072.3	ENST00000602449.1	655	1	-468	6	39	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTCATGGTCCTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	101597548	101598665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101597500_101598700
WTC11_00090887	chrX	+	3420	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	324	-14	-6	14	multi-exon	FALSE	canonical	3	50	junction_1	46.8401537145215	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCATTCCTGCAAGGCA	101620892	True	NA	41	True	AATAAA	-35	NA	101623120	101627857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
WTC11_00090889	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	28.6476438821764	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101620922	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
WTC11_00090892	chrX	+	1147	3	FSM	ENSG00000184905.9	ENST00000372780.6	1110	3	-37	0	-37	0	multi-exon	TRUE	canonical	3	121	junction_1	7.5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGAATCTGTCTGTTT	102123682	True	NA	11	True	AATAAA	-17	NA	102125641	102127712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102125807_102126372_102126446_102126803
WTC11_00090893	chrX	+	3558	8	NIC	ENSG00000271147.8	novel	1848	6	NA	NA	-283	1491	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	39.831276809122	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTGATGATGAGCTTTT	102599196	False	NA	NA	False	NA	NA	NA	102599228	102641998	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102599267_102599347_102599573_102599705_102599848_102600919_102601033_102601463_102601510_102601879_102602103_102605481_102605654_102639399
WTC11_00090894	chrX	+	2867	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	-10	-2189	4	1209	multi-exon	FALSE	canonical	3	17	junction_2	28.7672653471886	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATTATTT	102597722	True	NA	NA	False	AATAAA	-17	NA	102599515	102641716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
WTC11_00090895	chrX	+	660	6	FSM	ENSG00000271147.8	ENST00000460026.6	645	6	-15	0	-2	0	multi-exon	FALSE	canonical	3	15	junction_4	42.9809260021233	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGAGAAGCTGGCTTT	102597716	True	NA	NA	False	AATAGA	-25	NA	102599509	102639538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399
WTC11_00090896	chrX	+	980	6	FSM	ENSG00000271147.8	ENST00000466616.5	964	6	-16	0	-2	0	multi-exon	FALSE	canonical	3	15	junction_3	44.4792086260536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597716	True	NA	3	True	ATTAAA	-17	NA	102599509	102650145	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
WTC11_00090897	chrX	+	599	5	NIC	ENSG00000271147.8	novel	645	6	NA	NA	-5	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.0419646713494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTTGTCAGGTAATA	102597738	True	NA	9	True	ATTAAA	-23	NA	102599531	102650151	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102605481_102605654_102649953
WTC11_00090899	chrX	+	2658	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	-22	0	1	0	multi-exon	FALSE	canonical	3	85	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597722	True	NA	17	True	AATAAA	-25	NA	102599515	102604159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102601463_102601510_102601879
WTC11_00090901	chrX	+	2514	4	NIC	ENSG00000125962.16	novel	2664	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	52.3598658855765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597745	True	NA	17	True	AATAAA	-25	NA	102599538	102604159	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102599573_102599705_102599860_102601463_102601510_102601879
WTC11_00090902	chrX	+	3653	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	-119	2	-116	0	multi-exon	TRUE	canonical	0	0	junction_1	34.8523672079817	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	102710848	True	NA	11	True	AATAAA	-19	NA	102712328	102717731	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
WTC11_00090903	chrX	+	5726	8	NIC	ENSG00000286237.1	novel	5582	8	NA	NA	-166	-82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33.2541235742859	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTTTATGGACATAG	102710848	True	NA	NA	False	AGTAAA	-23	NA	102712328	102753448	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102720533_102720822_102720956_102721092_102747816_102747912_102748698
WTC11_00090904	chrX	+	5170	4	FSM	ENSG00000198908.12	ENST00000457056.6	5155	4	-17	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_1	30.6267856622271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGTCTCCTTTATTT	102719810	True	NA	NA	False	AATAAA	-14	NA	102720725	102753538	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102720826_102720956_102721092_102747816_102747912_102748698
WTC11_00090905	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	102744828	True	NA	8	True	AATAAA	-15	NA	102745978	102752438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102746175_102747816_102747912_102748698
WTC11_00090906	chrX	+	1037	6	FSM	ENSG00000223546.8	ENST00000663114.1	1389	6	-17	369	6	-369	multi-exon	FALSE	canonical	2	7	junction_5	14.7051011557214	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAAGTGTGGAGTTT	102768124	True	NA	NA	False	NA	NA	NA	102769166	102834976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102834627
WTC11_00090907	chrX	+	852	6	FSM	ENSG00000223546.8	ENST00000420471.5	838	6	-14	0	6	0	multi-exon	FALSE	canonical	3	18	junction_5	12.2212928939618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGAGTGAGTACGCAT	102768124	True	NA	NA	False	NA	NA	NA	102769166	102839964	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102839800
WTC11_00090908	chrX	+	2113	8	FSM	ENSG00000223546.8	ENST00000440496.5	2101	8	-12	0	6	0	multi-exon	FALSE	canonical	2	4	junction_3	6.64861501612577	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATAAGTCTTTTTGTG	102768124	True	NA	NA	False	AATAAA	-16	NA	102769166	102885406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102826968_102827145_102839800_102839864_102845856_102846021_102865041_102865153_102884142
WTC11_00090911	chrX	+	281	1	FSM	ENSG00000102128.8	ENST00000218249.7	1029	1	196	552	196	-552	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCGAGCGCCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	102937467	102937748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102937500_102937700
WTC11_00090913	chrX	+	1330	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	1058	junction_1	16	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	103215054	False	NA	66	True	ATTAAA	-25	NA	103215089	103217246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103215239_103215681_103215765_103216148
WTC11_00090914	chrX	+	1175	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	-43	2	-33	-2	multi-exon	FALSE	canonical	3	38	junction_1	15.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACACGTTTAAGACTCAG	103329662	True	NA	NA	False	AATAAA	-18	NA	103330195	103332324	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103330305_103330922_103331041_103331376
WTC11_00090915	chrX	+	1068	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	-47	7	-30	0	multi-exon	FALSE	canonical	3	744	junction_2	4.5	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350870	True	NA	96	True	AATAAA	-11	NA	103356458	103358455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103356607_103357082_103357162_103357614
WTC11_00090916	chrX	+	1997	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	-59	0	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350870	True	NA	96	True	AATAAA	-11	NA	103356458	103358455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103356500_103358500
WTC11_00090917	chrX	+	959	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	-260	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350900	True	NA	96	True	AATAAA	-11	NA	103356488	103358455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103356607_103357614
WTC11_00090918	chrX	+	1073	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	-166	6	-166	0	multi-exon	FALSE	canonical	3	790	junction_2	1981.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	NA	False	NA	42	True	AATAAA	-15	NA	103376228	103378071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103376614_103377027_103377107_103377462
WTC11_00090919	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_2	484.5	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	103333378	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103376614_103377027_103377107_103377509
WTC11_00090920	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	103376836	False	NA	42	True	AATAAA	-15	NA	103376915	103378071	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103377107_103377509
WTC11_00090921	chrX	+	1574	3	FSM	ENSG00000281091.3	ENST00000629535.3	2720	3	19	1127	-9	-1127	multi-exon	FALSE	canonical	3	9	junction_2	4.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGTTTTATCCATTC	103404222	True	NA	NA	False	TTTAAA	-27	NA	103404795	103451627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103405097_103408157_103408300_103450496
WTC11_00090922	chrX	+	720	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	-168	-214	-45	0	multi-exon	FALSE	canonical	3	49	junction_1	77.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATAAGGGGCTGGCTCAT	103585427	False	NA	NA	False	AAGAAA	-3	NA	103585446	103587063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585684_103586218_103586292_103586653
WTC11_00090923	chrX	+	1327	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	-116	-203	-45	0	multi-exon	FALSE	canonical	3	204	junction_2	395.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATATTTGAATTTCA	103585427	False	NA	12	True	AATAAA	-19	NA	103585446	103587729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103586218_103586292_103586653
WTC11_00090924	chrX	+	3823	3	FSM	ENSG00000133142.19	ENST00000468024.5	1135	3	-45	-2643	-45	2432	multi-exon	TRUE	canonical	3	49	junction_1	417.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTCTGCATTTGGGGA	103585427	False	NA	-3	True	ATTAAA	-10	NA	103585446	103590161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585684_103586218_103586292_103586648
WTC11_00090926	chrX	+	1287	3	FSM	ENSG00000133142.19	ENST00000472484.6	1264	3	-23	0	0	0	multi-exon	FALSE	canonical	3	884	junction_2	55.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATATTTGAATTTCA	103575436	True	NA	12	True	AATAAA	-19	NA	103585491	103587729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103586218_103586292_103586648
WTC11_00090928	chrX	+	1589	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	-18	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	403	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	103575459	True	NA	-23	True	AAAACA	-11	NA	103585514	103587694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103585858_103586292_103586648
WTC11_00090931	chrX	+	559	1	FSM	ENSG00000279894.1	ENST00000623412.1	2297	1	1530	208	1530	-208	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAATTATTGAACATAT	NA	False	NA	NA	False	NA	NA	NA	103598137	103598696	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103598100_103598700
WTC11_00090932	chrX	+	1127	3	FSM	ENSG00000196507.11	ENST00000243286.7	1124	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	38	junction_1	45.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGTATCAGCCCGTT	103605390	True	NA	20	True	AATAAA	-31	NA	103607902	103609926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103608071_103608603_103608674_103609037
WTC11_00090934	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	103605450	True	NA	21	True	AATAAA	-32	NA	103607962	103609927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103608059_103608603_103608674_103609037
WTC11_00090935	chrX	+	1199	3	FSM	ENSG00000172465.14	ENST00000372625.8	1200	3	0	1	0	-1	multi-exon	FALSE	canonical	1	4	junction_1	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCCTATGTTTTTTT	103628947	True	NA	NA	False	AATAAA	-23	NA	103628974	103630952	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103629026_103629493_103629574_103629884
WTC11_00090936	chrX	+	1302	2	NNC	ENSG00000172465.14	novel	1200	3	NA	NA	572	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103629550	False	NA	NA	False	AATAAA	-24	NA	103629570	103630953	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103629804_103629884
WTC11_00090937	chrX	+	3435	9	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31111	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	36.5684290064531	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAACATCGTGTCCTTT	103740683	True	NA	-1	True	AATAAA	-16	NA	103742606	103792612	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103746874_103746923_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
WTC11_00090939	chrX	+	2911	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	-22	7	-12	-4	multi-exon	FALSE	canonical	3	100	junction_6	8.5374989832438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAACATCGTGTCCTTT	103776509	True	NA	-1	True	AATAAA	-16	NA	103776827	103792612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
WTC11_00090942	chrX	+	653	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	139	junction_1	18	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	103962443	True	NA	NA	False	AATAAA	-14	NA	103962625	103965976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103962724_103964505_103964623_103965538
WTC11_00090943	chrX	+	678	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	-15	0	2	multi-exon	FALSE	canonical	3	31	junction_1	66.9593574906118	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGACTCTGTGGTTCAT	103962492	True	NA	NA	False	AATAAA	-21	NA	103962674	103965983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
WTC11_00090944	chrX	+	2186	3	FSM	ENSG00000158427.15	ENST00000436583.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	70	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGACTCTGTGGTTC	103962486	True	NA	NA	False	AATAAA	-19	NA	103962668	103965981	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103964295_103964505_103964623_103965538
WTC11_00090945	chrX	+	2875	2	FSM	ENSG00000166707.12	ENST00000537356.3	2907	2	32	0	-1	0	multi-exon	FALSE	canonical	3	6	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGGAAGATACAAA	104112307	True	NA	NA	False	ATTAAA	-7	NA	104112542	104115604	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104113247_104113433
WTC11_00090946	chrX	+	7645	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	145	junction_4	9.26498785752038	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	104163260	True	NA	16	True	AATAAA	-24	NA	104166431	104195902	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
WTC11_00090947	chrX	+	7478	6	NIC	ENSG00000123575.9	novel	7624	6	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	53.8345613895014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	104163298	True	NA	16	True	AATAAA	-24	NA	104166469	104195902	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188178_104189607
WTC11_00090948	chrX	+	3855	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	-3	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	7.30080647243364	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	106611747	True	NA	6	True	ATTAAA	-16	NA	106611974	106679439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
WTC11_00090949	chrX	+	3605	13	FSM	ENSG00000147231.14	ENST00000372544.6	3607	13	2	0	2	0	multi-exon	TRUE	canonical	3	6	junction_8	8.17516564562048	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	NA	False	NA	4	True	ATTAAA	-14	NA	106611931	106679437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
WTC11_00090951	chrX	+	5199	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	-12	-1089	4	1089	multi-exon	FALSE	canonical	3	10	junction_5	4.85340659285368	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTATATTATTTTATTTG	106801285	True	NA	NA	False	ATTAAA	-30	NA	106802692	106831172	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
WTC11_00090952	chrX	+	774	1	FSM	ENSG00000213569.4	ENST00000399148.3	611	1	-79	-84	-79	84	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTCTTTTAATGTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	107131579	107132353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107131600_107132400
WTC11_00090953	chrX	+	675	1	FSM	ENSG00000204053.6	ENST00000372451.2	1075	1	518	-118	518	118	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGCATTGCAGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	107273099	107273774	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107273100_107273800
WTC11_00090955	chrX	+	1438	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	-4	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	165.70141821964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	107622423	True	NA	NA	False	NA	NA	NA	107628485	107650469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
WTC11_00090956	chrX	+	2094	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	-24	0	1	0	multi-exon	FALSE	canonical	3	398	junction_5	13.0384048104053	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	107622423	True	NA	16	True	AATAAA	-19	NA	107628485	107651026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
WTC11_00090957	chrX	+	2251	10	FSM	ENSG00000080561.14	ENST00000443968.2	2251	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	3.82970843102535	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATATTGCAGATTTAAT	107826403	False	NA	12	True	AATAAA	-25	NA	107826413	107927193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107826431_107840669_107841386_107854608_107854705_107903957_107904066_107905477_107905627_107916001_107916130_107917505_107917650_107924342_107924505_107926093_107926302_107926670
WTC11_00090958	chrX	+	2249	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	-4	-40	-4	40	multi-exon	FALSE	canonical	2	12	junction_9	5.50946155868853	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACATTTTATCTGTGCA	108091393	True	NA	53	True	NA	NA	NA	108091773	108154711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
WTC11_00090959	chrX	+	934	10	FSM	ENSG00000101844.18	ENST00000457035.5	939	10	5	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_1	6.08174763706845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATACAACCCAGACCTTT	108091393	True	NA	NA	False	AAAACA	-26	NA	108091773	108150175	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108091880_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151
WTC11_00090960	chrX	+	6427	51	FSM	ENSG00000188153.14	ENST00000361603.7	6427	51	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_41	23.2232728098345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	108436981	False	NA	23	True	ATTAAA	-19	NA	108439923	108697545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
WTC11_00090963	chrX	+	1565	3	FSM	ENSG00000237863.3	ENST00000664433.1	1561	3	-4	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	108736431	False	NA	NA	False	TTTAAA	-26	NA	108736480	108739223	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108736592_108737264_108737924_108738428
WTC11_00090965	chrX	+	2691	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	1	0	1	0	multi-exon	FALSE	canonical	3	20	junction_1	47.097637945018	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	109535695	True	NA	13	True	AATAAA	-14	NA	109535781	109544684	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
WTC11_00090966	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.4406682011537	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	109535660	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
WTC11_00090967	chrX	+	1014	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	71	0	71	0	multi-exon	FALSE	canonical	3	19	junction_1	54.2361093327642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	109536005	False	NA	NA	False	NA	NA	NA	109537188	109543206	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
WTC11_00090968	chrX	+	5567	7	FSM	ENSG00000157600.12	ENST00000372073.5	5567	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.54606056566195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	110002513	True	NA	13	True	ATTAAA	-14	NA	110003094	110177788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110003157_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
WTC11_00090969	chrX	+	1292	1	FSM	ENSG00000225366.5	ENST00000602699.1	2710	1	121	1297	121	-1297	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAGATATTATGCAAAT	NA	False	NA	NA	False	AATACA	-1	NA	110520432	110521724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110520400_110521700
WTC11_00090970	chrX	+	369	3	ISM	ENSG00000077264.16	ENST00000372007.10	9126	18	-13	129723	-13	-1148	5prime_fragment	FALSE	canonical	3	21	junction_2	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACAACACCGTGGCCC	111095409	True	NA	NA	False	NA	NA	NA	111096177	111097638	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_111096416_111097389_111097457_111097574
WTC11_00090971	chrX	+	5334	3	NNC	ENSG00000077264.16	novel	9126	18	NA	NA	5694	-23260	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	6.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTCATCTAATTAATG	111102312	False	NA	-42	True	NA	NA	NA	111103080	111129156	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_111103307_111123076_111123279_111124250
WTC11_00090972	chrX	+	3634	3	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	6.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGTCCTGTTAAGAAT	111542852	False	NA	4	True	AATAAA	-15	NA	111544179	111555978	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111544407_111545592_111546469_111553447
WTC11_00090973	chrX	+	4823	2	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCTGTTAAGAATTCC	111542852	False	NA	7	True	AATAAA	-18	NA	111544179	111555981	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111546469_111553447
WTC11_00090974	chrX	+	2774	2	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCTGTTAAGAATTCC	111542839	False	NA	7	True	AATAAA	-18	NA	111544166	111555981	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111544407_111553447
WTC11_00090975	chrX	+	667	1	FSM	ENSG00000229939.1	ENST00000448271.1	287	1	-183	-197	-183	197	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACTTTTCCTTCTCCCT	NA	False	NA	NA	False	GATAAA	-19	NA	111618624	111619291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111618600_111619300
WTC11_00090976	chrX	+	972	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	-270	214	-209	0	multi-exon	FALSE	canonical	3	19	junction_1	31.0590834807897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	NA	False	NA	24	True	AATAAA	-39	NA	111680908	111688040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
WTC11_00090977	chrX	+	2540	4	FSM	ENSG00000101901.12	ENST00000371979.7	2770	4	0	230	0	-230	multi-exon	FALSE	canonical	3	34	junction_1	25.3902868567227	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTTAGAAATCTGTGAT	111681107	False	NA	NA	False	NA	NA	NA	111681117	111689942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111687886
WTC11_00090978	chrX	+	701	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	-22	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	33.8854278742681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	111678586	True	NA	16	True	AATAAA	-25	NA	111681169	111688134	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
WTC11_00090979	chrX	+	1122	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	-24	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	36.1005540123694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	111678586	True	NA	NA	False	NA	NA	NA	111681169	111688642	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
WTC11_00090981	chrX	+	4175	27	FSM	ENSG00000101901.12	ENST00000610588.4	4175	27	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	9.86356633416141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGAGTGGGATTTTTTC	111678586	True	NA	10	True	AATAAA	-21	NA	111681169	111760645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681425_111682131_111682236_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
WTC11_00090984	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	13.5327785275071	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	111678586	True	NA	14	True	AATAAA	-25	NA	111681169	111760649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
WTC11_00090986	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	114034423	True	NA	18	True	AATAAA	-18	NA	114040387	114050858	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114040637_114042335_114042534_114050494
WTC11_00090988	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	933	junction_8	73.7697920711603	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	115552978	True	NA	20	True	AGTAAA	-25	NA	115561173	115650861	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
WTC11_00090989	chrX	+	272	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTTTTATACCTAAA	NA	False	NA	NA	False	NA	NA	NA	115679937	115680209	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_115679900_115680200
WTC11_00090990	chrX	+	467	1	FSM	ENSG00000234785.1	ENST00000434365.1	1310	1	815	28	815	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATCAGGGCAAGATCT	NA	False	NA	NA	False	NA	NA	NA	115703625	115704092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115703600_115704100
WTC11_00090991	chrX	+	751	3	Antisense	novelGene_ENSG00000235244.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAGTCCGGCAAGGGA	NA	False	NA	91	True	AAGAAA	-39	NA	115722931	115725323	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_115723090_115724654_115724775_115724850
WTC11_00090992	chrX	+	314	2	Antisense	novelGene_ENSG00000235244.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	84	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACATGATGAATGTTAT	NA	False	NA	NA	False	NA	NA	NA	115722974	115725049	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_115723090_115724850
WTC11_00090993	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	115839462	True	NA	NA	False	NA	NA	NA	115841009	115843050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115841079_115842839
WTC11_00090994	chrX	+	3281	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTGACTGAGACCTG	115893978	False	NA	4	True	AATGAA	-4	NA	115893989	115897270	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_115894000_115897300
WTC11_00090995	chrX	+	3894	2	Antisense	novelGene_ENSG00000235244.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATCAATATATCAA	NA	False	NA	NA	False	NA	NA	NA	115922280	115926195	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_115924626_115924646
WTC11_00090996	chrX	+	4125	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	-11	0	-11	0	multi-exon	FALSE	canonical	2	74	junction_4	23.606187272881	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	118344310	True	NA	30	True	ATTAAA	-40	NA	118346094	118449961	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
WTC11_00090997	chrX	+	4029	20	FSM	ENSG00000131725.14	ENST00000371825.7	4029	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	36.1332559889868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTCCAACACTTGTT	118344358	True	NA	6	True	ATTAAA	-16	NA	118346142	118449937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443583_118443688_118444359_118444495_118448892
WTC11_00090998	chrX	+	6882	53	FSM	ENSG00000147251.16	ENST00000276202.9	6719	53	-171	8	-171	0	multi-exon	TRUE	canonical	0	0	junction_30	8.24268996564971	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGTAATTAGAAGTGAAA	118495606	True	NA	8	True	AATAAA	-12	NA	118495643	118686139	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118496074_118542724_118542842_118542925_118543016_118543510_118543594_118545322_118545393_118546020_118546117_118561382_118561518_118566004_118566183_118566573_118566654_118568078_118568163_118572322_118572464_118573805_118574019_118578524_118578648_118580096_118580180_118584734_118584858_118585040_118585118_118588136_118588322_118588412_118588479_118590209_118590303_118593213_118593338_118597430_118597553_118598029_118598117_118599138_118599229_118605237_118605357_118608071_118608142_118608230_118608357_118609277_118609350_118610271_118610419_118614691_118614776_118615599_118615712_118618549_118618729_118624538_118624656_118627503_118627580_118628162_118628273_118630378_118630491_118636345_118636413_118638079_118638128_118639434_118639578_118641189_118641306_118643456_118643595_118648944_118649128_118651963_118652078_118654601_118654818_118654903_118654962_118662685_118662793_118671022_118671146_118675935_118676050_118676590_118676738_118680481_118680693_118681057_118681249_118681693_118681795_118683078_118683218_118685687
WTC11_00090999	chrX	+	4071	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	-75	0	-71	0	multi-exon	FALSE	canonical	3	104	junction_4	11.6034477634882	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	118726455	True	NA	9	True	AATAAA	-21	NA	118727530	118794533	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
WTC11_00091000	chrX	+	1762	2	FSM	ENSG00000101856.10	ENST00000535419.2	1762	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGTGGTGACTTATTTA	119214709	True	NA	15	True	AATAAA	-17	NA	119236244	119244465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119236692_119243150
WTC11_00091001	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_1	25	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	119214749	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119236692_119240308_119240465_119243150
WTC11_00091002	chrX	+	2506	5	FSM	ENSG00000077713.19	ENST00000217909.8	2507	5	1	0	1	0	multi-exon	FALSE	canonical	3	27	junction_1	7.92148975887743	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGTCATTTATT	119398302	True	NA	NA	False	ATTAAA	-21	NA	119399336	119454478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119399679_119406459_119406702_119410189_119410363_119452008_119452144_119452864
WTC11_00091003	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	7057	junction_3	401.07300526906	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	119430985	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
WTC11_00091004	chrX	+	1259	5	NNC	ENSG00000005022.6	novel	1307	4	NA	NA	0	71633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3253.05697575373	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGAAGGTATAAAAAAGC	119430985	True	NA	NA	False	AAAAAG	-4	NA	119468443	119543029	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900_119471317_119542997
WTC11_00091005	chrX	+	1497	4	FSM	ENSG00000005022.6	ENST00000460013.1	775	4	-224	-498	-224	42	multi-exon	FALSE	canonical	1	37	junction_1	3377.69033512547	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTCTTTTTAAAACCA	119469032	False	NA	10	True	AATAAA	-25	NA	119469052	119471438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119469384_119469660_119470148_119470372_119470514_119470900
WTC11_00091007	chrX	+	1813	5	FSM	ENSG00000077721.16	ENST00000625938.2	1381	5	-115	-317	-105	0	multi-exon	FALSE	canonical	3	189	junction_3	138.409717866919	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATAGTCAAGGTATCTT	NA	False	NA	12	True	AATAAA	-14	NA	119574430	119584418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119582587_119582677_119583126
WTC11_00091008	chrX	+	1793	6	FSM	ENSG00000077721.16	ENST00000371558.7	1776	6	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	195.532503691841	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGGTATCTTTTTTT	119569123	True	NA	17	True	AATAAA	-19	NA	119574545	119584423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
WTC11_00091009	chrX	+	1628	5	FSM	ENSG00000077721.16	ENST00000628549.1	934	5	115	-809	115	5	multi-exon	FALSE	canonical	0	0	junction_3	212.174898373959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATCTTTTTTTTTTTTTT	119569440	False	NA	24	True	AATAAA	-26	NA	119574862	119584430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
WTC11_00091010	chrX	+	5745	3	FSM	ENSG00000077721.16	ENST00000371569.6	2643	3	-3097	-5	2490	0	multi-exon	FALSE	canonical	0	0	junction_1	279	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGGTATCTTTTTTT	119577222	False	NA	17	True	AATAAA	-19	NA	119577237	119584423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119581597_119582587_119582677_119583126
WTC11_00091011	chrX	+	2040	1	FSM	ENSG00000187808.5	ENST00000343905.5	1615	1	-434	9	-434	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATGACAAGGCTGTCC	NA	False	NA	-1	True	ATTAAA	-18	NA	119758153	119760193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119758200_119760200
WTC11_00091012	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	3633	junction_2	17.5	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	119860616	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119872014_119873303_119873394_119876513
WTC11_00091013	chrX	+	1541	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	52	junction_2	2	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCTGATTCCTTA	120139818	True	NA	18	True	AATAAA	-18	NA	120140704	120146855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120140850_120143722_120143901_120145637
WTC11_00091014	chrX	+	1662	2	FSM	ENSG00000258545.7	ENST00000665317.1	1340	2	-265	-57	-265	-1	multi-exon	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTCTCTCTGATTCCT	120142568	False	NA	16	True	AATAAA	-16	NA	120143454	120146853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120143901_120145637
WTC11_00091015	chrX	+	5265	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	-54	0	-54	0	multi-exon	FALSE	canonical	3	97	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	NA	False	NA	9	True	AATAAA	-16	NA	120250697	120258398	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120250978_120253413
WTC11_00091016	chrX	+	806	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	8771	0	0	multi-exon	FALSE	canonical	3	355	junction_3	19.4010309004444	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTAGCTTCAGAAATTA	120600828	True	NA	19	True	AATAAA	-19	NA	120604100	120612388	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
WTC11_00091017	chrX	+	2515	1	FSM	ENSG00000182890.5	ENST00000328078.3	2485	1	55	-85	55	85	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTTTATCATGTTAAC	121047562	True	NA	NA	False	NA	NA	NA	121047664	121050179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_121047700_121050200
WTC11_00091020	chrX	+	636	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	8	0	-8	multi-exon	FALSE	canonical	3	20	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGTAATAGTAATT	123183886	False	NA	51	True	AATAAA	-19	NA	123184559	123253694	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123184645_123185831_123185991_123253302
WTC11_00091021	chrX	+	423	1	FSM	ENSG00000179101.5	ENST00000416267.1	400	1	39	-62	39	62	mono-exon	FALSE	NA	NA	NA	NA	NA	3204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATTGGTAGTACTGAA	NA	False	NA	NA	False	NA	NA	NA	123514511	123514934	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123514500_123514900
WTC11_00091022	chrX	+	329	3	FSM	ENSG00000101966.13	ENST00000422098.5	390	3	61	0	21	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATAAGGAAGAAGAATTT	123859677	False	NA	NA	False	NA	NA	NA	123859784	123885711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123859906_123860166_123860294_123885630
WTC11_00091023	chrX	+	8415	7	FSM	ENSG00000101966.13	ENST00000434753.7	8415	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.21455025366432	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTATTTGTTT	123859704	False	NA	NA	False	AATAAA	-38	NA	123859811	123913976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123859906_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
WTC11_00091024	chrX	+	8569	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	10	junction_4	0.763762615825973	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	123859916	False	NA	NA	False	AATAAA	-34	NA	123860041	123913972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
WTC11_00091025	chrX	+	8324	7	FSM	ENSG00000101966.13	ENST00000355640.3	8584	7	260	0	78	0	multi-exon	FALSE	canonical	0	0	junction_1	4.31083905212585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATATCATACTACCT	123860501	False	NA	NA	False	AATAAA	-27	NA	123860531	123913965	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123860546_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
WTC11_00091026	chrX	+	6876	35	FSM	ENSG00000101972.20	ENST00000218089.13	5218	35	-500	-1158	-193	0	multi-exon	FALSE	canonical	3	18	junction_1	75.4725195754896	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	NA	False	NA	NA	False	AATAAA	-22	NA	123960018	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
WTC11_00091027	chrX	+	2089	17	FSM	ENSG00000101972.20	ENST00000455404.5	2089	17	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	60.1297750182886	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCAAAGGAGAAGAAGAC	NA	False	NA	-29	True	AATAAA	-32	NA	123960518	124062907	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901
WTC11_00091028	chrX	+	6159	33	NIC	ENSG00000101972.20	novel	5218	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	59.3527589923164	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123960215	False	NA	NA	False	AATAAA	-22	NA	123960559	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00091029	chrX	+	296	3	FSM	ENSG00000101972.20	ENST00000458700.5	296	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	122.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGTATCAAATATTT	123960744	True	NA	NA	False	NA	NA	NA	123960863	124025915	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123960943_124022530_124022672_124025839
WTC11_00091030	chrX	+	742	7	FSM	ENSG00000101972.20	ENST00000435103.5	742	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	101.391567696727	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTACTACCTTAAGTG	123961117	True	NA	NA	False	NA	NA	NA	123961317	124042645	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123961436_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568
WTC11_00091031	chrX	+	6081	34	NIC	ENSG00000101972.20	novel	6045	34	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	67.8571394049862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123961326	False	NA	NA	False	AATAAA	-22	NA	123961337	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123961436_123961725_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00091032	chrX	+	6064	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	-73	0	-61	0	multi-exon	FALSE	canonical	3	106	junction_1	50.8247217773988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123961353	False	NA	NA	False	AATAAA	-22	NA	123961644	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00091039	chrX	+	207	1	ISM	ENSG00000122126.18	ENST00000371113.9	5173	24	7	52084	7	-18488	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTATCCGCCGGAGA	129538753	True	NA	NA	False	NA	NA	NA	129540265	129540472	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_129540300_129540500
WTC11_00091042	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	23.0780618505001	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	129902523	True	NA	6	True	AATAAA	-17	NA	129906163	129929752	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
WTC11_00091044	chrX	+	1295	2	FSM	ENSG00000156697.13	ENST00000498179.1	1910	2	0	615	0	-615	multi-exon	FALSE	canonical	3	152	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCTCTGTCATCCAGG	129920698	False	NA	NA	False	NA	NA	NA	129920712	129922448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129920753_129921193
WTC11_00091045	chrX	+	7464	14	FSM	ENSG00000085185.16	ENST00000540052.6	7465	14	-7	8	-7	-8	multi-exon	FALSE	canonical	1	1	junction_1	6.41650977036084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAAACCTGTGTCAGGG	129982400	True	NA	0	True	AAAACA	-9	NA	129982627	130058063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129982763_130005187_130005318_130012577_130012669_130012949_130016214_130020984_130021151_130022896_130022978_130024989_130025380_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
WTC11_00091047	chrX	+	1608	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	-663	0	-663	0	multi-exon	FALSE	canonical	3	39	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	130171286	False	NA	5	True	AATAAA	-15	NA	130171298	130184870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130172321_130184284
WTC11_00091048	chrX	+	774	5	FSM	ENSG00000102078.16	ENST00000464184.5	751	5	-23	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	18.5674446276271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCAGTGTATTTTTTT	130338361	True	NA	NA	False	NA	NA	NA	130339887	130358987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130358639
WTC11_00091049	chrX	+	620	6	FSM	ENSG00000102078.16	ENST00000495156.5	608	6	-12	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	22.922478051031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGATACAATTTTAACTC	130338361	True	NA	NA	False	NA	NA	NA	130339887	130364725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130358639_130358736_130364627
WTC11_00091050	chrX	+	1399	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	4	0	0	multi-exon	FALSE	canonical	3	20	junction_4	23.7580395749406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338361	True	NA	27	True	ATTAAA	-17	NA	130339887	130373357	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
WTC11_00091052	chrX	+	1404	11	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	22.7246562130211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGAATCACTTTGGCTT	130338392	True	NA	19	True	ATTAAA	-9	NA	130339918	130373349	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130349823_130349868_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
WTC11_00091054	chrX	+	1208	9	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	32.6917420765551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338404	True	NA	27	True	ATTAAA	-17	NA	130339930	130373357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130339977_130345181_130345276_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
WTC11_00091058	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	21.9872690436989	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	130399194	True	NA	5	True	CATAAA	-16	NA	130401986	130413656	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
WTC11_00091060	chrX	+	1509	1	FSM	ENSG00000221930.6	ENST00000592932.1	1624	1	168	-53	-26	53	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACTTTAATTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	130495132	130496641	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130495100_130496600
WTC11_00091062	chrX	+	3336	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	-85	0	-85	0	multi-exon	TRUE	canonical	3	382	junction_1	37.6100039443526	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016340	True	NA	31	True	AATAAA	-19	NA	132023216	132075943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
WTC11_00091063	chrX	+	3195	10	NIC	ENSG00000134602.16	novel	3017	11	NA	NA	-75	0	intron_retention	FALSE	canonical	2	13	junction_1	145.451362198613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016350	True	NA	31	True	AATAAA	-19	NA	132023226	132075943	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
WTC11_00091064	chrX	+	3140	11	NIC	ENSG00000134602.16	novel	3251	12	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	142.986048270452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016350	True	NA	31	True	AATAAA	-19	NA	132023226	132075943	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
WTC11_00091066	chrX	+	1186	10	FSM	ENSG00000134602.16	ENST00000496850.1	1186	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	150.105888551308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAAGATTTGGAAGAA	132023488	True	NA	NA	False	NA	NA	NA	132023607	132074270	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
WTC11_00091067	chrX	+	205	1	FSM	ENSG00000227008.2	ENST00000426577.1	416	1	145	66	145	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATAAAGAAAGTCAGGGG	NA	False	NA	NA	False	AAAAAG	-34	NA	133671115	133671320	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_133671100_133671300
WTC11_00091068	chrX	+	262	1	FSM	ENSG00000224908.1	ENST00000445940.1	251	1	29	-40	29	40	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCAGACTTAAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	134166710	134166972	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134166700_134167000
WTC11_00091069	chrX	+	1731	3	NNC	ENSG00000203952.9	novel	1790	3	NA	NA	148	60	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTACTTTGGGGGTCTAA	134236722	True	NA	71	True	NA	NA	NA	134237194	134246267	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_134237344_134238749_134238841_134244776
WTC11_00091070	chrX	+	1759	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	135	-595	135	166	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCACGGTTCCCATAG	134236709	True	NA	NA	False	NA	NA	NA	134237181	134246373	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134237344_134244776
WTC11_00091071	chrX	+	4484	11	FSM	ENSG00000156531.18	ENST00000370803.8	4430	11	-55	1	-31	0	multi-exon	FALSE	canonical	3	173	junction_5	67.1765584113982	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	NA	False	NA	13	True	AATAAA	-16	NA	134373256	134428789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
WTC11_00091072	chrX	+	4817	10	ISM	ENSG00000156531.18	ENST00000625464.2	4434	11	-55	2	-31	0	intron_retention	FALSE	canonical	3	58	junction_5	90.7513221343678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	NA	False	NA	13	True	AATAAA	-16	NA	134373256	134428789	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
WTC11_00091073	chrX	+	4814	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	-55	0	-31	0	multi-exon	FALSE	canonical	3	173	junction_5	61.2553852507861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	NA	False	NA	13	True	AATAAA	-16	NA	134373256	134428789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
WTC11_00091074	chrX	+	4456	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	-24	2	0	0	multi-exon	FALSE	canonical	3	58	junction_5	91.1276028434854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	134366614	True	NA	13	True	AATAAA	-16	NA	134373287	134428789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
WTC11_00091075	chrX	+	1418	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	357	junction_5	35.0158446278253	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	134454386	True	NA	30	True	AATAAA	-16	NA	134460141	134500668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
WTC11_00091077	chrX	+	1538	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	-59	4	-59	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTATTGCATTTAGAA	134990826	True	NA	NA	False	ATTAAA	-17	NA	134990931	134992469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134990900_134992500
WTC11_00091078	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027961	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135032400_135033500
WTC11_00091081	chrX	+	4348	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	-2	-312	-2	312	multi-exon	FALSE	canonical	3	31	junction_1	6.81909084849293	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTTTTGTAGTTTAA	135344018	True	NA	NA	False	AATAAA	-16	NA	135344793	135363725	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
WTC11_00091082	chrX	+	5116	2	FSM	ENSG00000178947.9	ENST00000417443.3	5230	2	12	102	12	-102	multi-exon	FALSE	canonical	2	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGATACCAAGTCACACTA	135421661	True	NA	-94	True	NA	NA	NA	135421955	135427973	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135422731_135423632
WTC11_00091086	chrX	+	3905	18	FSM	ENSG00000165359.16	ENST00000639893.2	3904	18	-1	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	10.2963022891934	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCTGGATAAATTTCT	135519990	True	NA	17	True	AATAAA	-27	NA	135520658	135582510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
WTC11_00091089	chrX	+	4709	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_7	29.3572629665793	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAACTTATGGGTTGG	135983883	True	NA	NA	False	AATAAA	-18	NA	135985436	136047261	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
WTC11_00091093	chrX	+	2568	8	FSM	ENSG00000022267.19	ENST00000394155.8	2568	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	59.0465053658417	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	136145960	True	NA	10	True	AATAAA	-16	NA	136147532	136211354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209242_136209443_136209870
WTC11_00091094	chrX	+	2436	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	5	0	0	multi-exon	FALSE	canonical	3	103	junction_6	16.9156403629567	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	136145892	True	NA	10	True	AATAAA	-16	NA	136147464	136211354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
WTC11_00091096	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	147.452775449139	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	136497040	False	NA	59	True	AATAAA	-27	NA	136497078	136512342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
WTC11_00091097	chrX	+	962	6	FSM	ENSG00000102241.12	ENST00000425695.5	885	6	-13	-64	0	0	multi-exon	FALSE	canonical	3	186	junction_1	201.585118498365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	136489789	True	NA	NA	False	NA	NA	NA	136497220	136502941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
WTC11_00091098	chrX	+	1425	6	NNC	ENSG00000102241.12	novel	2694	9	NA	NA	-94	2081	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	266.1074970759	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGAGTTCTGAGGAATA	136497272	False	NA	NA	False	AATAAA	-14	NA	136497497	136505022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504518
WTC11_00091099	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_6	65.9941995557185	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	136494566	False	NA	63	True	AATAAA	-31	NA	136497591	136512346	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
WTC11_00091100	chrX	+	636	1	FSM	ENSG00000225400.1	ENST00000427490.1	651	1	0	15	0	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTGGGTGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	136847383	136848019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136847400_136848000
WTC11_00091101	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	7	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	137562330	True	NA	-16	True	AATAAA	-31	NA	137566126	137572102	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_137567752_137568901_137569066_137569890
WTC11_00091102	chrX	+	2356	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	-388	0	3	0	multi-exon	FALSE	canonical	3	32	junction_2	115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137562333	True	NA	11	True	AATAAA	-14	NA	137566129	137577691	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_137567752_137568901_137569066_137577121
WTC11_00091106	chrX	+	231	1	FSM	ENSG00000252719.1	ENST00000516910.1	131	1	-194	94	-194	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACGTCCTTAGAAACACC	NA	False	NA	NA	False	ACTAAA	-23	NA	139909709	139909940	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_139909700_139909900
WTC11_00091107	chrX	+	1190	1	FSM	ENSG00000214653.4	ENST00000416838.1	1137	1	358	-411	358	411	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACTATCTTAAAACAGC	NA	False	NA	32	True	AAAAAG	-5	NA	140032701	140033891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140032700_140033900
WTC11_00091108	chrX	+	1516	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-282	0	-282	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	140091381	False	NA	5	True	AATAAA	-16	NA	140091395	140092911	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140091400_140092900
WTC11_00091109	chrX	+	1272	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	82	0	7	0	multi-exon	FALSE	canonical	3	10	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	140764403	True	NA	NA	False	AAGAAA	-24	NA	140764579	140773230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140764699_140772077
WTC11_00091112	chrX	+	4333	16	FSM	ENSG00000102081.16	ENST00000218200.12	4333	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_15	31.0815415033139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAAATTAGTCT	147908806	True	NA	58	True	ATTAAA	-15	NA	147911950	147951112	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948682
WTC11_00091113	chrX	+	4271	16	FSM	ENSG00000102081.16	ENST00000440235.6	4271	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_13	39.2443060271876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGACAGATGTTTGC	147908806	True	NA	71	True	ATTAAA	-28	NA	147911950	147951125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948682
WTC11_00091115	chrX	+	4238	16	FSM	ENSG00000102081.16	ENST00000687593.1	4159	16	-114	35	0	6	multi-exon	FALSE	canonical	3	88	junction_15	32.2958545671456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGATGTAAATTTTTA	147908811	True	NA	19	True	ATTAAA	-24	NA	147911955	147951073	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948733
WTC11_00091118	chrX	+	470	4	ISM	ENSG00000102081.16	ENST00000475038.3	2747	16	31069	978	-1448	30	3prime_fragment	FALSE	canonical	3	22	junction_3	81.0651315644128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	147943212	True	NA	4	True	AATAAA	-14	NA	147943244	147948534	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_147943327_147944868_147945052_147945533_147945617_147948412
WTC11_00091121	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_1	29.0807066626655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540599	False	NA	NA	False	AATAAA	-15	NA	149540625	149547309	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
WTC11_00091122	chrX	+	1525	5	FSM	ENSG00000197620.11	ENST00000423421.5	1403	5	-125	3	-125	0	multi-exon	FALSE	canonical	3	17	junction_1	26.8374738006393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTAGTGTTTGAGG	149540796	True	NA	NA	False	AATAAA	-12	NA	149540849	149547306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738
WTC11_00091123	chrX	+	2300	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	-22	129	3	-129	multi-exon	FALSE	canonical	3	13	junction_2	28.3670142947755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGTTCTCATTTAAAT	149540915	True	NA	NA	False	AATATA	-21	NA	149540989	149548202	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
WTC11_00091124	chrX	+	409	1	Genic_Genomic	ENSG00000235254.3	novel	NA	NA	NA	NA	2412	349	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGAAATCCCAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	149771308	149771717	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_149771300_149771700
WTC11_00091127	chrX	+	3427	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	-15	0	4	0	multi-exon	FALSE	canonical	2	46	junction_10	10.1882785792382	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	150567424	True	NA	10	True	AATAAA	-20	NA	150568605	150673143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
WTC11_00091128	chrX	+	1227	10	FSM	ENSG00000063601.17	ENST00000542156.5	1227	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	36.7588067888936	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGAAGTATGCCCTCCT	150691098	True	NA	NA	False	NA	NA	NA	150693395	150735499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150735463
WTC11_00091129	chrX	+	4342	15	ISM	ENSG00000063601.17	ENST00000370390.7	2755	16	8	179	3	0	intron_retention	FALSE	canonical	3	87	junction_13	12.9803619332578	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGTCTTTTTTAAG	150691084	True	NA	13	True	ATTAAA	-15	NA	150693381	150764924	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150736594_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150755688_150755866_150762564
WTC11_00091132	chrX	+	3574	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	-67	0	-67	0	multi-exon	FALSE	canonical	3	3732	junction_1	426.780974271347	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	150918414	True	NA	40	True	AATAAA	-26	NA	150983267	150990771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
WTC11_00091133	chrX	+	834	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	-22	0	-1	0	multi-exon	FALSE	canonical	3	161	junction_1	1819.00403724126	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	150918530	False	NA	6	True	AATAAA	-18	NA	150983383	150987932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
WTC11_00091134	chrX	+	545	3	FSM	ENSG00000029993.15	ENST00000430118.1	529	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	4320	junction_2	221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTAAGGTGGGGCTGG	150985428	False	NA	NA	False	NA	NA	NA	150985514	150987297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150985750_150986050_150986191_150987127
WTC11_00091137	chrX	+	4738	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	624	junction_2	3.5	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	151392703	True	NA	17	True	ATTAAA	-20	NA	151397182	151409364	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151397362_151403630_151403741_151404915
WTC11_00091138	chrX	+	5708	4	FSM	ENSG00000130032.17	ENST00000674457.1	5705	4	-7	4	-5	-4	multi-exon	FALSE	canonical	2	4	junction_1	4.96655480858378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTCGTCATCCAT	151695356	True	NA	8	True	AATAAA	-19	NA	151695450	151705920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151695545_151698783_151698822_151699995_151700157_151700505
WTC11_00091140	chrX	+	1776	3	FSM	ENSG00000147381.12	ENST00000684668.1	1767	3	-11	2	-11	0	multi-exon	FALSE	canonical	3	70	junction_1	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151916116	False	NA	16	True	AATAAA	-13	NA	151916183	151925166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151916321_151923452_151923525_151923599
WTC11_00091142	chrX	+	7217	8	ISM	ENSG00000268089.3	ENST00000598523.3	6468	9	6	3	6	-3	intron_retention	FALSE	canonical	3	31	junction_2	4.80221037542046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGTCATCGTGTTTC	152637425	True	NA	8	True	AATAAA	-21	NA	152637900	152657539	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525
WTC11_00091143	chrX	+	6486	9	FSM	ENSG00000268089.3	ENST00000598523.3	6468	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	9	junction_8	10.2072278312968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCGTGTTTCCTC	152637401	True	NA	11	True	AATAAA	-24	NA	152637876	152657542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152652540
WTC11_00091144	chrX	+	1658	3	FSM	ENSG00000221867.9	ENST00000370278.4	1682	3	0	24	0	-13	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAATAATTCTTCCTC	152698637	True	NA	NA	False	ATTAAA	-3	NA	152698793	152702323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152698830_152700621_152700688_152700767
WTC11_00091145	chrX	+	1949	5	FSM	ENSG00000183305.14	ENST00000331220.6	1946	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	46	junction_3	66.8893676154888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152714582	152718606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152714683_152715956_152716077_152716647_152716746_152716895_152716962_152717041
WTC11_00091148	chrX	+	1986	6	FSM	ENSG00000183305.14	ENST00000458057.5	576	6	-21	-1389	0	0	multi-exon	FALSE	canonical	3	19	junction_1	65.2349599524672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152714608	152718606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152714683_152714846_152714929_152715078_152715158_152715956_152716077_152716895_152716962_152717041
WTC11_00091149	chrX	+	1905	5	FSM	ENSG00000183305.14	ENST00000682532.1	1886	5	-19	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	62.5319918121916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714608	152718607	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152714683_152715078_152715158_152715956_152716077_152716895_152716962_152717041
WTC11_00091152	chrX	+	2036	6	NNC	ENSG00000183305.14	novel	576	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.826642479787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152714641	152718606	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152714682_152714762_152714929_152715078_152715158_152715956_152716077_152716895_152716962_152717041
WTC11_00091154	chrX	+	1617	2	FSM	ENSG00000213401.10	ENST00000357916.8	1664	2	47	0	-36	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	152733764	True	NA	3	True	AATAAA	-4	NA	152733825	152737669	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152733860_152736086
WTC11_00091156	chrX	+	784	5	FSM	ENSG00000268916.6	ENST00000617158.4	789	5	0	5	0	-2	multi-exon	FALSE	canonical	0	0	junction_4	54.9380332738623	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGTCTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	152753920	152760217	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152753982_152755154_152755215_152758906_152759022_152759475_152759649_152759842
WTC11_00091157	chrX	+	844	2	FSM	ENSG00000268916.6	ENST00000599845.3	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152759217	152760219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152759685_152759842
WTC11_00091159	chrX	+	1776	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	26	-172	-4	172	multi-exon	FALSE	canonical	3	35	junction_1	123.628918037003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGATACTCTATCTT	152825872	True	NA	NA	False	NA	NA	NA	152830992	152869535	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
WTC11_00091160	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	35.7879240834682	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	152825942	True	NA	NA	False	NA	NA	NA	152831062	152869729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
WTC11_00091161	chrX	+	3061	8	ISM	ENSG00000147394.19	ENST00000454925.1	3191	9	3566	0	3566	0	3prime_fragment	FALSE	canonical	2	22	junction_1	5.40974177964614	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCAGTGTTAAAGTT	152945228	False	NA	13	True	AATAAA	-14	NA	152945266	152973472	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
WTC11_00091162	chrX	+	3766	2	FSM	ENSG00000183837.10	ENST00000593810.3	3682	2	-84	0	-23	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	153056010	True	NA	25	True	AATAAA	-18	NA	153056385	153060462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153056639_153056949
WTC11_00091164	chrX	+	2374	2	FSM	ENSG00000235961.6	ENST00000421798.5	2238	2	-136	0	-136	0	multi-exon	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	NA	False	NA	8	True	AATAAA	-18	NA	153072317	153075019	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153072607_153072934
WTC11_00091165	chrX	+	6438	4	FSM	ENSG00000063587.15	ENST00000650114.2	6420	4	-18	0	-12	0	multi-exon	FALSE	canonical	3	16	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTTGACGTCTT	153333305	True	NA	9	True	AATAAA	-17	NA	153334134	153352926	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153334286_153336633_153336711_153345519_153345622_153346818
WTC11_00091166	chrX	+	526	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	28	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	153599205	True	NA	18	True	AATAAA	-30	NA	153599367	153599893	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153599400_153599900
WTC11_00091167	chrX	+	2453	4	FSM	ENSG00000130829.18	ENST00000342782.4	2434	4	-27	8	-27	-8	multi-exon	FALSE	canonical	3	9	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTGAGTAGAGAGAGAA	153647069	True	NA	4	True	AATAAA	-13	NA	153647175	153651318	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153647426_153647918_153648327_153649231_153649688_153649979
WTC11_00091168	chrX	+	3955	13	FSM	ENSG00000130821.17	ENST00000253122.10	3931	13	-24	0	-24	0	multi-exon	FALSE	canonical	3	247	junction_1	36.5296683076464	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTCCTGCTTCCGCCT	153685101	True	NA	NA	False	AATAAA	-19	NA	153687901	153696588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153688837_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
WTC11_00091173	chrX	+	4001	10	FSM	ENSG00000101986.12	ENST00000218104.6	3669	10	-332	0	-332	0	multi-exon	TRUE	canonical	3	13	junction_3	5.31478255248951	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCAGAGCCTGGT	153724491	True	NA	16	True	AGTAAA	-29	NA	153724523	153744755	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153726167_153729231_153729413_153736111_153736255_153736344_153736514_153737156_153737252_153740091_153740238_153740573_153740720_153742986_153743072_153743220_153743347_153743488
WTC11_00091174	chrX	+	558	2	FSM	ENSG00000198753.12	ENST00000472415.1	699	2	141	0	141	0	multi-exon	FALSE	canonical	3	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGACGGAGTCTCGC	NA	False	NA	7	True	AATAAA	-24	NA	153778522	153779340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153778675_153778934
WTC11_00091175	chrX	+	921	3	FSM	ENSG00000180879.14	ENST00000491833.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTATGAGGCAGGGC	153793910	True	NA	NA	False	NA	NA	NA	153794174	153796342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794335_153794673_153794755_153795662
WTC11_00091176	chrX	+	761	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	-16	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	805.675010300197	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153793910	True	NA	44	True	AATAAA	-27	NA	153794174	153798498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
WTC11_00091177	chrX	+	821	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	-219	6	0	0	multi-exon	FALSE	canonical	3	2000	junction_1	160.068735235835	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153794396	False	NA	39	True	AATAAA	-22	NA	153794448	153798493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
WTC11_00091178	chrX	+	718	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	953	0	20	0	multi-exon	FALSE	canonical	3	69	junction_1	787.357394495452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153794416	False	NA	44	True	AATAAA	-27	NA	153794468	153798498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
WTC11_00091179	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	867.621569291589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153775865	True	NA	44	True	AATAAA	-27	NA	153794673	153798498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
WTC11_00091182	chrX	+	1341	6	FSM	ENSG00000102119.12	ENST00000369842.9	1281	6	-60	0	-38	0	multi-exon	FALSE	canonical	3	242	junction_5	19.5181966380094	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	154367600	True	NA	18	True	AATAAA	-19	NA	154379234	154381523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
WTC11_00091183	chrX	+	765	3	FSM	ENSG00000102119.12	ENST00000494443.5	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGCCTCCGGGGAG	154367793	False	NA	NA	False	GATAAA	-29	NA	154379427	154380462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941
WTC11_00091184	chrX	+	800	2	FSM	ENSG00000102119.12	ENST00000471965.1	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGGGGAGGGGATTAA	154380547	False	NA	-36	True	NA	NA	NA	154380564	154381443	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154380803_154380881
WTC11_00091186	chrX	+	851	5	FSM	ENSG00000147403.18	ENST00000485196.5	839	5	-12	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_4	451.126645189574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGGACAAGTGGC	154149287	True	NA	-70	True	NA	NA	NA	154398366	154400817	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399595_154399802_154399942_154400463_154400627_154400701
WTC11_00091187	chrX	+	2174	7	FSM	ENSG00000147403.18	ENST00000369817.7	2164	7	-10	0	0	0	multi-exon	FALSE	canonical	3	9845	junction_1	2810.83220179837	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTGCACAAGTGTCC	154149287	True	NA	NA	False	AATAAA	-16	NA	154398366	154402332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
WTC11_00091188	chrX	+	1529	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	-10	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	516.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	154149287	True	NA	11	True	AATAAA	-2	NA	154398366	154400898	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399595_154399802
WTC11_00091189	chrX	+	1752	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	-21	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149287	True	NA	26	True	AATAAA	-17	NA	154398366	154400913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337
WTC11_00091190	chrX	+	1379	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	-10	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_4	455.263934438036	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149287	True	NA	26	True	AATAAA	-17	NA	154398366	154400913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
WTC11_00091191	chrX	+	596	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	-11	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	6777.10345206564	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	154149287	True	NA	30	True	AATAAA	-21	NA	154398366	154400917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
WTC11_00091192	chrX	+	2283	6	FSM	ENSG00000147403.18	ENST00000344746.8	2278	6	-5	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_5	407.231138298633	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGTGTCCTATCTCA	154149287	True	NA	NA	False	AATAAA	-23	NA	154398366	154402339	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
WTC11_00091193	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	399.40103592755	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154398416	True	NA	26	True	AATAAA	-17	NA	154398496	154400913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
WTC11_00091194	chrX	+	1502	9	FSM	ENSG00000102125.16	ENST00000613002.4	1485	9	-17	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	29.8579972536672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACGTCTTCCTTCTGC	154408976	True	NA	NA	False	NA	NA	NA	154411523	154421439	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
WTC11_00091195	chrX	+	1805	10	FSM	ENSG00000102125.16	ENST00000612460.5	1790	10	-15	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	38.2296504409798	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	154408976	True	NA	-4	True	NA	NA	NA	154411523	154421700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
WTC11_00091196	chrX	+	2159	9	FSM	ENSG00000102125.16	ENST00000617701.5	2158	9	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.9477254413596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	154409013	True	NA	-4	True	NA	NA	NA	154411560	154421700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413359_154413481_154413568_154419542_154419624_154419704_154420095_154420211_154420265_154420657_154420736_154420902
WTC11_00091200	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	1	185	junction_7	121.93714227694	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	154418953	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
WTC11_00091201	chrX	+	2624	8	FSM	ENSG00000071553.18	ENST00000678317.1	2562	8	-62	0	-62	0	multi-exon	FALSE	canonical	3	486	junction_6	51.8561589831892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCGTTGGGCCTCTT	154419261	False	NA	8	True	AATAAA	-13	NA	154428984	154436508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154435187_154435273_154435506_154435681
WTC11_00091203	chrX	+	2556	8	FSM	ENSG00000071553.18	ENST00000484908.2	2556	8	0	0	0	0	multi-exon	FALSE	canonical	1	185	junction_5	135.40717130498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCGTTGGGCCTCTT	154421292	False	NA	8	True	AATAAA	-13	NA	154431015	154436508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
WTC11_00091205	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	86.5632716572104	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428250	True	NA	16	True	AATAAA	-17	NA	154437153	154443467	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
WTC11_00091207	chrX	+	4069	5	FSM	ENSG00000203879.12	ENST00000491154.1	4069	5	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_3	43.9623418393516	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGGATCTTGATGGT	154437979	False	NA	14	True	AATAAA	-15	NA	154438005	154443465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154438631_154438764_154438865_154439005_154439141_154439940_154441795_154442110
WTC11_00091210	chrX	+	2417	4	FSM	ENSG00000203879.12	ENST00000468483.5	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_3	29.5334085777823	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGGATCTTGATGGT	154440488	False	NA	14	True	AATAAA	-15	NA	154440523	154443465	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154441795_154442110_154442256_154442373_154442429_154442519
WTC11_00091212	chrX	+	1511	12	FSM	ENSG00000071859.15	ENST00000464419.5	1470	12	-41	0	-27	0	multi-exon	FALSE	canonical	3	222	junction_3	46.9534673817978	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440329	True	NA	37	True	NA	NA	NA	154444113	154450654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449932_154450028_154450100_154450208_154450320_154450423
WTC11_00091213	chrX	+	1357	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	-20	0	-20	0	multi-exon	FALSE	canonical	3	222	junction_3	45.0555213042752	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440336	True	NA	37	True	NA	NA	NA	154444120	154450654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
WTC11_00091214	chrX	+	763	7	FSM	ENSG00000071859.15	ENST00000481619.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	26.3465156878265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGTCTGGGGAGTGA	154440463	False	NA	NA	False	NA	NA	NA	154444247	154449081	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892
WTC11_00091216	chrX	+	10816	33	FSM	ENSG00000130827.6	ENST00000369682.4	10885	33	0	69	0	-69	multi-exon	FALSE	canonical	2	10	junction_3	9.94653677166078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAACCCAAGCACAACAAG	154457230	True	NA	-59	True	NA	NA	NA	154458280	154477710	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154458429_154460156_154460778_154461098_154461639_154462127_154462311_154463390_154463520_154463589_154463691_154463950_154464075_154464156_154464314_154464401_154464502_154464753_154464869_154465017_154465219_154465423_154465521_154465656_154465848_154465934_154466081_154466149_154466271_154466375_154466513_154466622_154466794_154467056_154467151_154467231_154467472_154467544_154467689_154467766_154468002_154468081_154468225_154468302_154468560_154468662_154468730_154468822_154468970_154469055_154469216_154469378_154469483_154469687_154469785_154469976_154470168_154470441_154470612_154471104_154471318_154471487_154471639_154472589
WTC11_00091217	chrX	+	280	2	FSM	ENSG00000130827.6	ENST00000482598.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGTGTGCAGCTGAC	154463398	False	NA	NA	False	NA	NA	NA	154464448	154464980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154464502_154464753
WTC11_00091221	chrX	+	1986	10	FSM	ENSG00000269335.7	ENST00000594239.6	1973	10	0	-13	0	0	multi-exon	FALSE	canonical	3	105	junction_6	16.7663684532791	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGCGTATCTTTGGCAT	154546311	True	NA	NA	False	AGTAAA	-16	NA	154547619	154565046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558531_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
WTC11_00091222	chrX	+	2590	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	-122	1	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	74.0279869856182	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	154762543	True	NA	23	True	ATTAAA	-35	NA	154762741	154777688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
WTC11_00091223	chrX	+	3081	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	1038	junction_7	76.6275863005518	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	154762541	True	NA	23	True	ATTAAA	-35	NA	154762739	154777688	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
WTC11_00091229	chrX	+	1707	1	FSM	ENSG00000288722.1	ENST00000610495.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	154886311	False	NA	NA	False	GATAAA	-20	NA	154886354	154888061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154886400_154888100
WTC11_00091230	chrX	+	6090	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	-13	220	-13	-220	multi-exon	FALSE	canonical	3	451	junction_1	20.6926919466753	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGACTAATACATAT	155024633	True	NA	NA	False	TATAAA	-34	NA	155026830	155060084	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
WTC11_00091231	chrX	+	3105	11	FSM	ENSG00000185515.16	ENST00000340647.8	1101	11	8	-2012	8	253	multi-exon	FALSE	canonical	0	0	junction_4	109.102199794505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGCACAAGTCCTTTT	155067381	True	NA	13	True	AATAAA	-27	NA	155071427	155123330	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073373_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
WTC11_00091232	chrX	+	3088	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	-68	-251	20	251	multi-exon	FALSE	canonical	0	0	junction_4	87.9946021071747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTAGCACAAGTCCTT	155067393	True	NA	11	True	AATAAA	-25	NA	155071439	155123328	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
WTC11_00091235	chrX	+	2850	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.665377339154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	155067452	True	NA	20	True	AATAAA	-23	NA	155071498	155123074	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
WTC11_00091237	chrX	+	1638	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	599	junction_3	40.7057735462674	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	155211572	True	NA	34	True	ATTAAA	-43	NA	155216437	155239841	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
WTC11_00091238	chrX	+	1707	1	FSM	ENSG00000288709.1	ENST00000369505.5	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	NA	False	NA	NA	False	GATAAA	-20	NA	155382094	155383801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155382100_155383800
WTC11_00091239	chrX	+	8990	2	FSM	ENSG00000168939.12	ENST00000302805.7	9019	2	0	29	0	-29	multi-exon	FALSE	canonical	3	14	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAATTCTGTACCA	155766785	True	NA	NA	False	NA	NA	NA	155767811	155782430	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155768137_155773765
WTC11_00091242	chrX	+	2613	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	199	junction_2	23.7770254400232	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155878991	True	NA	NA	False	AATAAA	-21	NA	155881325	155943769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
WTC11_00091244	chrX	+	2511	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	-15	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	86.3249674196289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879025	True	NA	NA	False	AATAAA	-21	NA	155881359	155943769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
WTC11_00091251	chrX	-	2320	11	NNC	ENSG00000178605.13	novel	1907	10	NA	NA	0	1245	at_least_one_novel_splicesite	TRUE	non_canonical	2	22	junction_1	97.3871141373437	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGATTCACAGCCGAC	NA	False	NA	62	True	TTTAAA	-44	NA	318819	303283	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_303471_304523_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
WTC11_00091252	chrX	-	2016	4	FSM	ENSG00000178605.13	ENST00000485332.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	29.5785207353054	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACGGGCACGGTGGC	NA	False	NA	NA	False	ACTAAA	-22	NA	312463	304528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_305198_307359_307513_307731_307881_311418
WTC11_00091254	chrX	-	2393	13	FSM	ENSG00000167393.18	ENST00000390665.9	2378	13	0	-15	0	15	multi-exon	FALSE	canonical	3	331	junction_12	45.1819623547077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCTCCCTCAGCCACAGC	NA	False	NA	16	True	NA	NA	NA	386907	333917	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_386367
WTC11_00091255	chrX	-	5806	8	FSM	ENSG00000167393.18	ENST00000477110.6	5802	8	0	-4	0	0	multi-exon	FALSE	canonical	3	424	junction_4	25.1436688180674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	NA	False	NA	-14	True	GATAAA	-20	NA	347324	334234	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_338711_338777_338897_340764_340941_341306_341932_345515_345673_346173_346261_346700_346776_347233
WTC11_00091256	chrX	-	2011	13	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	107.957649875619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	NA	False	NA	-14	True	GATAAA	-20	NA	374006	334234	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_373531
WTC11_00091260	chrX	-	2493	5	NNC	ENSG00000169100.14	novel	1451	4	NA	NA	0	3372	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2300.43749915098	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCATCTCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	1392088	1382779	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_1382862_1385166_1386760_1387278_1387420_1389240_1389728_1391898
WTC11_00091261	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4968	junction_3	246.725668619128	2584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	NA	False	NA	-27	True	AATAAA	-18	NA	1392113	1386151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
WTC11_00091263	chrX	-	888	4	FSM	ENSG00000169100.14	ENST00000484026.6	854	4	0	-34	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2608.99985094331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATGATGATGCAGTCCG	NA	False	NA	NA	False	NA	NA	NA	1392088	1387310	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1387420_1389240_1389728_1390191_1390294_1391898
WTC11_00091264	chrX	-	2067	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	-2	0	2	multi-exon	TRUE	canonical	1	187	junction_11	84.1966530741507	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCCTCCATAGGGGT	NA	False	NA	0	True	AATAAA	-18	NA	1452909	1403136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
WTC11_00091265	chrX	-	1661	9	NNC	ENSG00000169093.16	novel	874	3	NA	NA	8	4796	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	168.792355795516	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGAGAAAGGCTTTTCA	NA	False	NA	NA	False	ATTAAA	-28	NA	1452864	1422930	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_1423508_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
WTC11_00091266	chrX	-	2747	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	59.2689257162263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCATTCATCCTCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	2500643	2219510	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
WTC11_00091267	chrX	-	2757	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	-4	-174	-4	174	multi-exon	FALSE	canonical	3	108	junction_6	58.6451191489965	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGATATTCACGTTAGA	NA	False	NA	NA	False	AAGAAA	-14	NA	2500980	2219331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
WTC11_00091268	chrX	-	744	5	FSM	ENSG00000169084.15	ENST00000412516.7	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	114.117264250419	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCGAAGAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	2500973	2243061	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500816
WTC11_00091269	chrX	-	797	5	FSM	ENSG00000169084.15	ENST00000444280.6	797	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	64.596342775733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTGAACATGGATGACC	NA	False	NA	NA	False	NA	NA	NA	2500650	2266769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
WTC11_00091271	chrX	-	4591	2	NIC	ENSG00000214717.12	novel	2832	2	NA	NA	0	-10	intron_retention	FALSE	canonical	3	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTGTCTGCCGCGTGT	NA	False	NA	-13	True	AATAAA	-25	NA	2500555	2486423	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2490770_2500310
WTC11_00091272	chrX	-	4544	2	FSM	ENSG00000214717.12	ENST00000381222.8	4507	2	7	-44	7	44	multi-exon	FALSE	canonical	3	75	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAGTGGAGGGAGGTT	NA	False	NA	41	True	NA	NA	NA	2500960	2486369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490770_2500816
WTC11_00091273	chrX	-	4500	2	FSM	ENSG00000214717.12	ENST00000381223.9	4510	2	0	10	0	-10	multi-exon	FALSE	canonical	3	109	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTGTCTGCCGCGTGT	NA	False	NA	-13	True	AATAAA	-25	NA	2500967	2486423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490773_2500816
WTC11_00091274	chrX	-	4617	2	FSM	ENSG00000214717.12	ENST00000381218.8	2832	2	-34	-1751	-34	0	multi-exon	FALSE	canonical	3	41	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTCCTCATTCATTTGT	NA	False	NA	-24	True	AATAAA	-14	NA	2500589	2486434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490773_2500310
WTC11_00091275	chrX	-	2026	2	NNC	ENSG00000289007.1	novel	1585	4	NA	NA	24539	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCAGGTGCACCTCT	NA	False	NA	-2	True	AATAAA	-17	NA	2584605	2566028	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_2567293_2583843
WTC11_00091276	chrX	-	663	4	FSM	ENSG00000006756.16	ENST00000494870.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.71404520791032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCCC	NA	False	NA	NA	False	NA	NA	NA	2929279	2920380	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2920724_2921902_2922025_2925615_2925766_2929231
WTC11_00091277	chrX	-	2105	7	FSM	ENSG00000157399.17	ENST00000683191.1	2337	7	87	145	87	-145	multi-exon	FALSE	canonical	3	19	junction_5	4.93288286231625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGCCTATAATGCCAGC	NA	False	NA	NA	False	AAAAAG	-26	NA	2953265	2934189	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142
WTC11_00091278	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.5191145493046	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	NA	False	NA	NA	False	NA	NA	NA	2964341	2934520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
WTC11_00091279	chrX	-	644	6	FSM	ENSG00000157399.17	ENST00000438544.5	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.0545674132471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGCGCCCGCTGGGAA	NA	False	NA	NA	False	NA	NA	NA	2964264	2949622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
WTC11_00091280	chrX	-	1154	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	184	0	-12	multi-exon	FALSE	canonical	0	0	junction_3	17.9666357451806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	2964288	2951921	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
WTC11_00091281	chrX	-	9804	7	FSM	ENSG00000101825.8	ENST00000217939.7	9804	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1.21335164821342	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGCAGTGATGACAATGC	NA	False	NA	NA	False	AATAAA	-19	NA	3346652	3308564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3311625_3317102_3318004_3320007_3324976_3330017_3330409_3330643_3330774_3343645_3343862_3346514
WTC11_00091282	chrX	-	6104	9	FSM	ENSG00000183943.6	ENST00000262848.6	6102	9	0	-2	0	2	multi-exon	FALSE	canonical	3	123	junction_1	14.3695641896336	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGGCTTTTCTCCTTT	NA	False	NA	31	True	NA	NA	NA	3713649	3604337	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
WTC11_00091283	chrX	-	2813	9	NIC	ENSG00000183943.6	novel	669	7	NA	NA	148	1081	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	35.7698808356975	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	NA	False	NA	-12	True	AATAAA	-22	NA	3713501	3609869	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
WTC11_00091286	chrX	-	701	5	FSM	ENSG00000285756.2	ENST00000653447.1	692	5	0	-9	0	9	multi-exon	FALSE	canonical	3	9	junction_4	30.6543226968074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGGTCCAAGCATCT	NA	False	NA	5	True	ATTAAA	-34	NA	3826631	3817518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3822373_3822581_3825087_3825232_3826600
WTC11_00091287	chrX	-	1479	5	FSM	ENSG00000285756.2	ENST00000662024.1	1470	5	0	-9	0	9	multi-exon	FALSE	canonical	2	9	junction_3	65.4083328024801	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGGTCCAAGCATCT	NA	False	NA	5	True	ATTAAA	-34	NA	3843566	3817518	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3818656_3818704_3828505_3829393_3843340
WTC11_00091289	chrX	-	1763	4	NIC	ENSG00000285756.2	novel	1470	5	NA	NA	-66	-10	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	60.4997704311531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAATTATTTATAAGGG	NA	False	NA	-21	True	ATTAAA	-8	NA	3843923	3817544	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3817779_3818441_3818501_3828505_3829393_3843340
WTC11_00091290	chrX	-	2673	2	FSM	ENSG00000285756.2	ENST00000671583.1	2673	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTACGCTGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	3843771	3827150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3829393_3843340
WTC11_00091291	chrX	-	4606	7	NNC	ENSG00000285756.2	novel	2670	11	NA	NA	0	2195	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.8772589869588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGTGTATATATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	3882317	3846010	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3848491_3854691_3854928_3860789_3860997_3863501_3863646_3865013_3865143_3866949_3867807_3881764
WTC11_00091292	chrX	-	5491	5	NIC	ENSG00000285756.2	novel	2198	3	NA	NA	0	1508	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	56.139892233598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTATCATCTATCTAC	NA	False	NA	NA	False	NA	NA	NA	3882317	3851225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3854928_3860789_3860997_3863501_3863646_3866921_3867807_3881764
WTC11_00091293	chrX	-	3042	2	FSM	ENSG00000285756.2	ENST00000661656.1	3042	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAAGCCTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	3867769	3852733	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3854928_3866921
WTC11_00091296	chrX	-	2155	3	FSM	ENSG00000285756.2	ENST00000438107.1	2155	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	67.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCAATTTTGATGC	NA	False	NA	NA	False	AATAGA	-15	NA	3882317	3864397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3865143_3866949_3867807_3881764
WTC11_00091298	chrX	-	2427	4	FSM	ENSG00000285756.2	ENST00000424415.2	2427	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	21.4527905462721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	3903602	3891437	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3893352_3899215_3899423_3901927_3902072_3903440
WTC11_00091299	chrX	-	4535	2	FSM	ENSG00000285756.2	ENST00000381106.4	1099	2	-305	-3131	-305	3131	multi-exon	FALSE	canonical	3	145	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAACTGAAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	3921051	3902555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3906233_3920193
WTC11_00091300	chrX	-	4969	2	NNC	ENSG00000285756.2	novel	2118	2	NA	NA	-210	4703	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGAGGTTGCAGGGAA	NA	False	NA	NA	False	NA	NA	NA	3931783	3925165	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3925417_3927065
WTC11_00091302	chrX	-	5896	7	NNC	ENSG00000146938.16	novel	5858	6	NA	NA	0	-19918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4850162039609	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCTCA	NA	False	NA	NA	False	AAAACA	-26	NA	6228867	5860554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_5860580_5890028_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
WTC11_00091303	chrX	-	5885	7	NNC	ENSG00000146938.16	novel	5858	6	NA	NA	0	-19918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4850162039609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCTCA	NA	False	NA	NA	False	AAAACA	-26	NA	6228867	5860554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_5860581_5890040_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
WTC11_00091304	chrX	-	5871	6	FSM	ENSG00000146938.16	ENST00000381093.6	5865	6	0	-6	0	6	multi-exon	FALSE	canonical	3	26	junction_5	38.4884398228871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCGTCCATTCTTTCTT	NA	False	NA	NA	False	AATAAA	-36	NA	6227203	5890025	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226879
WTC11_00091305	chrX	-	5869	6	NNC	ENSG00000146938.16	novel	5865	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	43.5228675525867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTGCAAATAATTAT	NA	False	NA	95	True	AATAAA	-20	NA	6227203	5890041	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226865
WTC11_00091306	chrX	-	5858	6	FSM	ENSG00000146938.16	ENST00000381095.8	5858	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	11.8220133649053	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTGCAAATAATTAT	NA	False	NA	95	True	AATAAA	-20	NA	6228867	5890041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
WTC11_00091308	chrX	-	2230	4	FSM	ENSG00000130021.15	ENST00000412827.6	1376	4	-119	-735	-114	137	multi-exon	FALSE	canonical	1	4	junction_2	54.3507129668048	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGAGCCGTCCTGCT	NA	False	NA	NA	False	TTTAAA	-43	NA	7148272	7048782	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7050473_7077219_7077450_7105748_7105839_7148052
WTC11_00091309	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.739839372653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	7148153	7048919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
WTC11_00091310	chrX	-	1149	8	NNC	ENSG00000006757.12	novel	3342	7	NA	NA	-111	55951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.7047263681484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTCACTTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	7927524	7842295	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_7842403_7900657_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
WTC11_00091311	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	17.1634301156072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	NA	False	NA	-5	True	ATTAAA	-17	NA	7927413	7898246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
WTC11_00091312	chrX	-	3295	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	-27	-516	-27	0	multi-exon	FALSE	canonical	3	34	junction_6	51.0547092179882	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	NA	False	NA	-5	True	ATTAAA	-17	NA	7927766	7898246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
WTC11_00091313	chrX	-	6265	14	FSM	ENSG00000011201.12	ENST00000262648.8	6265	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	39.7127258157379	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAGTCGACTCATTTA	NA	False	NA	-2	True	AATAAA	-17	NA	8732137	8528873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_8533054_8534318_8534461_8535590_8535812_8536770_8536943_8539663_8539759_8553951_8554099_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
WTC11_00091314	chrX	-	1773	9	NIC	ENSG00000011201.12	novel	704	3	NA	NA	-60	-2	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	63.4606177089382	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGATTTTCGCCCA	NA	False	NA	-4	True	AATAAA	-13	NA	8732197	8565807	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_8566213_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
WTC11_00091315	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	25.3068666570953	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	NA	False	NA	57	True	AATAAA	-15	NA	9765847	9725345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
WTC11_00091316	chrX	-	1899	5	ISM	ENSG00000101850.13	ENST00000467482.6	1645	9	18809	53	-7319	-53	3prime_fragment	FALSE	canonical	3	110	junction_3	25.0649157189886	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTCTTAACACT	NA	False	NA	4	True	AATAAA	-29	NA	9747038	9725398	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043
WTC11_00091317	chrX	-	857	8	FSM	ENSG00000101850.13	ENST00000447366.5	859	8	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_7	37.2706592484802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCGGGAAGGTGTCTCA	NA	False	NA	NA	False	GGGGCT	-34	NA	9786295	9739551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
WTC11_00091318	chrX	-	377	3	FSM	ENSG00000101850.13	ENST00000480178.1	397	3	0	20	0	-20	multi-exon	FALSE	canonical	2	2	junction_1	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATAAAGTTTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	9759394	9747852	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_9748074_9748573_9748667_9759331
WTC11_00091319	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16.7913852103973	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	NA	False	NA	-1	True	AATAAA	-22	NA	10620585	10445555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
WTC11_00091321	chrX	-	825	1	FSM	ENSG00000197582.5	ENST00000388829.3	606	1	-49	-170	-49	170	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGTTTCCCCACTAATAA	NA	False	NA	NA	False	NA	NA	NA	13379389	13378564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13378600_13379400
WTC11_00091322	chrX	-	2698	5	NNC	ENSG00000196459.15	novel	2842	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	47	junction_4	32.7948166636132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734618	13712244	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_13714506_13716003_13716086_13716529_13716679_13719870_13719983_13734524
WTC11_00091323	chrX	-	2840	6	FSM	ENSG00000196459.15	ENST00000380579.6	2842	6	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	45.980865585589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734618	13712244	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734043_13734186_13734524
WTC11_00091328	chrX	-	3118	8	FSM	ENSG00000046653.15	ENST00000316715.9	3118	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	341.968849279508	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	NA	False	NA	-6	True	AATAAA	-17	NA	13817093	13770938	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
WTC11_00091329	chrX	-	3083	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-207	-4	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTGCCTTTTTACCAT	NA	False	NA	-10	True	AATAAA	-13	NA	13938845	13770942	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
WTC11_00091330	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	170.581765991822	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
WTC11_00091333	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	306.035083319253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	13938415	13774336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
WTC11_00091334	chrX	-	3157	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	-10	0	10	multi-exon	FALSE	canonical	3	66	junction_4	22.0737400546441	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCACTGGGAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	14029892	14006715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
WTC11_00091335	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.0286071291069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	NA	False	NA	-14	True	CATAAA	-17	NA	14029893	14008672	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
WTC11_00091336	chrX	-	1002	1	FSM	ENSG00000231066.3	ENST00000453156.3	844	1	-67	-91	-67	91	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGAACTTTCCCTTC	NA	False	NA	NA	False	NA	NA	NA	14835386	14834384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14834400_14835400
WTC11_00091338	chrX	-	3490	10	FSM	ENSG00000181544.15	ENST00000398334.5	3008	10	10	-492	0	490	multi-exon	TRUE	canonical	3	27	junction_5	19.8463231660143	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATTTGAATGTTGTTAC	NA	False	NA	-9	True	ATTAAA	-22	NA	14873052	14842914	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
WTC11_00091340	chrX	-	3593	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	-3	0	-1	multi-exon	FALSE	canonical	3	16	junction_4	9.26498785752038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTTGTCTTATTTTA	NA	False	NA	-2	True	AATAAA	-26	NA	15335523	15319452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
WTC11_00091341	chrX	-	3220	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	27	-1	-4	0	multi-exon	FALSE	canonical	2	2	junction_4	14.4968962195361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335527	15319455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
WTC11_00091342	chrX	-	2936	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	27	-2109	-4	0	multi-exon	FALSE	canonical	3	8	junction_4	12.214745187682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335527	15319455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
WTC11_00091343	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_7	17.0453280953035	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493333	15384798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
WTC11_00091344	chrX	-	1320	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	219	0	-12	0	multi-exon	FALSE	canonical	3	31	junction_9	54.3073102870809	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493345	15384798	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
WTC11_00091345	chrX	-	417	3	FSM	ENSG00000087842.11	ENST00000484433.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGATATTGAGTTTGGA	NA	False	NA	NA	False	AAGAAA	-23	NA	15407550	15389962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15390252_15397448_15397532_15407505
WTC11_00091346	chrX	-	1043	1	Genic_Genomic	ENSG00000279413.1	novel	NA	NA	NA	NA	-237	164	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGATACCTGTTGACA	NA	False	NA	NA	False	TTTAAA	-37	NA	15703480	15702437	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_15702400_15703500
WTC11_00091347	chrX	-	3542	6	NNC	ENSG00000182287.15	novel	2365	6	NA	NA	0	29021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	613.006557876831	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATTTGAAACAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	15854827	15796784	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15796811_15830057_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091348	chrX	-	2237	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	470.899405393551	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	NA	False	NA	1	True	AATAAA	-21	NA	15854931	15825805	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091349	chrX	-	3959	5	NIC	ENSG00000182287.15	novel	3492	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	343	junction_1	451.765633376422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	NA	False	NA	-14	True	AATAAA	-14	NA	15854754	15830058	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091350	chrX	-	3492	5	FSM	ENSG00000182287.15	ENST00000380291.5	3492	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	479.83818887204	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	NA	False	NA	-14	True	AATAAA	-14	NA	15854804	15830058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091351	chrX	-	1925	5	FSM	ENSG00000182287.15	ENST00000450644.2	1925	5	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	419.100823191747	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	NA	False	NA	-93	True	NA	NA	NA	15854755	15830137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15831569_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091352	chrX	-	3503	6	FSM	ENSG00000182287.15	ENST00000673591.1	2365	6	14	-1152	0	0	multi-exon	FALSE	canonical	3	125	junction_1	564.576159610021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	NA	False	NA	-93	True	NA	NA	NA	15854813	15830137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00091353	chrX	-	999	1	FSM	ENSG00000235071.1	ENST00000447112.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTATATTTGGAAACCT	NA	False	NA	NA	False	NA	NA	NA	16475340	16474341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16474300_16475300
WTC11_00091354	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_18	24.2207568364078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16712669	16587998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
WTC11_00091355	chrX	-	3833	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	-307	0	0	multi-exon	FALSE	canonical	3	42	junction_18	38.1164962181811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16712936	16587998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
WTC11_00091356	chrX	-	4739	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	10	607	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_18	37.4955141349857	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTAGTATGTTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	16712926	16587391	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
WTC11_00091357	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_8	69.7395390419604	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	NA	False	NA	-4	True	AATAAA	-20	NA	16870362	16844340	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
WTC11_00091358	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	248.445514255579	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	88	True	NA	NA	NA	16870361	16844689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
WTC11_00091360	chrX	-	1535	3	FSM	ENSG00000102054.18	ENST00000486166.1	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	100.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGACAGTTTTCTGG	NA	False	NA	NA	False	ATTAAA	-40	NA	16858803	16852551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16853843_16857593_16857710_16858675
WTC11_00091361	chrX	-	384	1	FSM	ENSG00000214322.3	ENST00000453841.1	458	1	-64	138	-64	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGAAAGGGAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	17100303	17099919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_17099900_17100300
WTC11_00091362	chrX	-	2369	3	FSM	ENSG00000131831.18	ENST00000360011.5	2377	3	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACTAATTGGTTGCAG	NA	False	NA	-10	True	AATAAA	-33	NA	17860707	17800058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_17802035_17837536_17837731_17860508
WTC11_00091363	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.9433632776658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354688	18239312	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
WTC11_00091364	chrX	-	4010	14	NIC	ENSG00000102098.19	novel	4162	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_1	28.2015149200709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354688	18239312	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_18241380_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
WTC11_00091367	chrX	-	5227	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	-150	0	-150	0	multi-exon	TRUE	canonical	3	17	junction_4	19.1245914989053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	NA	False	NA	0	True	AATAAA	-21	NA	18984264	18892297	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
WTC11_00091368	chrX	-	5496	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-503	0	intron_retention	FALSE	canonical	3	52	junction_22	13.0268526087036	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	NA	False	NA	0	True	AATAAA	-21	NA	18984617	18892297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
WTC11_00091374	chrX	-	4701	28	FSM	ENSG00000173698.18	ENST00000379873.6	4698	28	0	-3	0	1	multi-exon	TRUE	canonical	0	0	junction_23	9.6899818162601	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTCACAAAGA	NA	False	NA	3	True	AATAAA	-22	NA	19122637	18989305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037588_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122441
WTC11_00091375	chrX	-	4806	28	FSM	ENSG00000173698.18	ENST00000379878.7	4803	28	0	-3	0	1	multi-exon	FALSE	canonical	2	4	junction_24	7.82963313360586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTCACAAAGA	NA	False	NA	3	True	AATAAA	-22	NA	19122637	18989305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19040188_19040225_19068716_19068836_19082701_19082747_19122441
WTC11_00091376	chrX	-	4769	27	FSM	ENSG00000173698.18	ENST00000379876.5	4779	27	12	-2	12	0	multi-exon	FALSE	canonical	2	3	junction_23	8.05427226850123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTAATTTTCACAAAG	NA	False	NA	2	True	AATAAA	-21	NA	19122625	18989306	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19040188_19040225_19068716_19068836_19082701_19082747_19122441
WTC11_00091378	chrX	-	4857	29	FSM	ENSG00000180815.15	ENST00000338883.9	4879	29	22	0	22	0	multi-exon	FALSE	canonical	1	6	junction_22	4.76099693727424	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGGTCAGCGCGAAC	NA	False	NA	-3	True	AATAAA	-15	NA	19515486	19360058	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652_19372828_19373535_19373696_19374476_19374661_19380119_19380278_19392001_19392108_19392342_19392474_19395080_19395209_19398225_19398360_19400575_19400664_19407187_19407284_19409923_19409974_19413356_19413465_19415106_19415258_19425530_19425691_19426230_19426344_19431437_19431609_19456912_19457020_19459984_19460154_19464212_19464407_19486481_19486506_19488827_19488968_19514900
WTC11_00091379	chrX	-	4730	18	FSM	ENSG00000147010.18	ENST00000397821.8	4728	18	0	-2	0	2	multi-exon	FALSE	canonical	3	420	junction_4	44.8435187788669	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTCAAAGTTGTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	19887600	19533974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
WTC11_00091380	chrX	-	6539	11	ISM	ENSG00000173681.17	ENST00000379687.8	6682	12	20763	-11	-5003	11	3prime_fragment	FALSE	canonical	3	37	junction_7	6.11637147334921	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCATCCTATCCATTA	NA	False	NA	8	True	AATAAA	-29	NA	19970298	19912848	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223
WTC11_00091381	chrX	-	279	3	FSM	ENSG00000173681.17	ENST00000456553.1	279	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGAAGGGGTAAGATTC	NA	False	NA	NA	False	NA	NA	NA	19915035	19914162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19914269_19914350_19914427_19914938
WTC11_00091382	chrX	-	3217	11	ISM	ENSG00000173681.17	ENST00000379682.9	6769	12	20763	3398	-5003	-3	3prime_fragment	FALSE	canonical	3	22	junction_3	9.0890043459116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTTACTTGCCAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	19970298	19916257	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_19917335_19929784_19929941_19935808_19935899_19937417_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223
WTC11_00091384	chrX	-	4445	8	NNC	ENSG00000173674.11	novel	4414	7	NA	NA	0	36057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.905444861511	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	20141838	20088467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_20088499_20124524_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
WTC11_00091385	chrX	-	4451	8	NNC	ENSG00000173674.11	novel	4414	7	NA	NA	0	36057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.905444861511	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	20141838	20088467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_20088505_20124524_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
WTC11_00091386	chrX	-	1734	8	NNC	ENSG00000173674.11	novel	4414	7	NA	NA	0	36057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.905444861511	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	20141838	20088467	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_20088499_20127235_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
WTC11_00091388	chrX	-	7987	22	FSM	ENSG00000177189.14	ENST00000379565.9	7987	22	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_21	9.8701317688158	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCCCTTTTATCAGA	NA	False	NA	0	True	AATAAA	-17	NA	20266909	20149910	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20266563
WTC11_00091389	chrX	-	3586	1	FSM	ENSG00000185915.5	ENST00000379499.3	3641	1	-91	146	-91	-146	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGGTGCTGCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	21658421	21654835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_21654800_21658400
WTC11_00091390	chrX	-	2454	16	NNC	ENSG00000123130.17	novel	4318	16	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.2906611408142	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAACATTTGACCCTTA	NA	False	NA	-8	True	AGTAAA	-13	NA	23743250	23701061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_23701818_23703621_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
WTC11_00091392	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.17744390374	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	NA	False	NA	-25	True	AATAAA	-21	NA	23743276	23703670	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
WTC11_00091394	chrX	-	683	7	FSM	ENSG00000123130.17	ENST00000492081.1	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	112.996558453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	NA	False	NA	-2	True	AATAAA	-23	NA	23743250	23707830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
WTC11_00091395	chrX	-	1123	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	-1	0	1	multi-exon	TRUE	canonical	3	156	junction_1	59.0566465353393	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATATCACTGAGTGATGG	NA	False	NA	-3	True	ATTAAA	-22	NA	23907938	23833351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
WTC11_00091396	chrX	-	930	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	-14	0	0	multi-exon	FALSE	canonical	3	14	junction_5	112.332233184625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907903	23833352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
WTC11_00091397	chrX	-	983	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	62.408808472843	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907901	23833352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
WTC11_00091398	chrX	-	728	1	FSM	ENSG00000238103.4	ENST00000330965.4	580	1	-27	-121	-27	121	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGGCTGGGCGTGG	NA	False	NA	NA	False	AATAAA	-40	NA	23837348	23836620	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23836600_23837300
WTC11_00091399	chrX	-	6478	4	NNC	ENSG00000174010.10	novel	6288	4	NA	NA	-16	94055	intron_retention	TRUE	non_canonical	0	0	junction_1	15.8954920234218	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTCCCCAGGTGAT	NA	False	NA	NA	False	NA	NA	NA	24025295	23889660	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_23889677_23983719_23989031_24005988_24006701_24024856
WTC11_00091400	chrX	-	492	2	Genic_Genomic	ENSG00000225071.1	novel	348	1	NA	NA	-24	93421	multi-exon	FALSE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGTTGTTGCCCCAA	NA	False	NA	NA	False	NA	NA	NA	24429944	24336151	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_24336189_24429489
WTC11_00091401	chrX	-	477	2	Genic_Genomic	ENSG00000225071.1	novel	348	1	NA	NA	-15	93419	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGAGTTGTTGCCCC	NA	False	NA	NA	False	NA	NA	NA	24429935	24336153	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_24336185_24429489
WTC11_00091403	chrX	-	5538	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	20	0	20	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6330251805305	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	24647327	24558086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
WTC11_00091405	chrX	-	856	7	FSM	ENSG00000102230.14	ENST00000496020.1	856	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	43.8688069386691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCACCTTCTCATGGCT	NA	False	NA	NA	False	NA	NA	NA	24647038	24562400	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24590022_24590175_24607744_24607862_24618984_24619085_24646988
WTC11_00091406	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	NA	False	NA	NA	NA	24789069	24788391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24788400_24789100
WTC11_00091407	chrX	-	606	1	FSM	ENSG00000228519.3	ENST00000496795.1	606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTCTTATTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	25646327	25645721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_25645700_25646300
WTC11_00091408	chrX	-	4372	3	ISM	ENSG00000157625.16	ENST00000378930.7	6255	7	16619	-1	9786	0	3prime_fragment	FALSE	canonical	3	13	junction_2	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGCG	NA	False	NA	-1	True	AATAAA	-21	NA	30843101	30827441	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_30831576_30834050_30834153_30842965
WTC11_00091409	chrX	-	762	6	ISM	ENSG00000157625.16	ENST00000288422.4	6647	11	-97	28081	-97	-12535	5prime_fragment	FALSE	canonical	2	10	junction_4	5.16139516022558	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAGTAGCAAATACTTA	NA	False	NA	NA	False	NA	NA	NA	30889351	30855522	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_30855563_30859486_30859679_30867114_30867219_30867464_30867550_30871698_30871802_30889113
WTC11_00091410	chrX	-	4642	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	3	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	8.47030659126339	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	NA	False	NA	NA	False	AATAAA	-27	NA	31266949	31119218	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
WTC11_00091411	chrX	-	2224	16	FSM	ENSG00000198947.18	ENST00000361471.8	2224	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	9.62958404547615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAATTTATAACAG	NA	False	NA	NA	False	NA	NA	NA	31266907	31121555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
WTC11_00091412	chrX	-	1149	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	4	247	4	-98	multi-exon	FALSE	canonical	3	27	junction_1	5.96735913114001	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTAGTAGCAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	31266959	31178668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
WTC11_00091413	chrX	-	4051	3	FSM	ENSG00000147027.4	ENST00000275954.4	4040	3	0	-11	0	11	multi-exon	FALSE	canonical	3	151	junction_1	4.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTCTCTGTTGTG	NA	False	NA	2	True	AATAAA	-32	NA	34657285	34627063	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_34630492_34639246_34639388_34656803
WTC11_00091414	chrX	-	288	1	FSM	ENSG00000233921.2	ENST00000419621.2	391	1	150	-47	150	47	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGAGACAAATGGAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	36375033	36374745	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_36374700_36375000
WTC11_00091415	chrX	-	2443	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	-17	-1707	-17	0	multi-exon	FALSE	canonical	3	12	junction_4	37.0944739819828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	NA	False	NA	0	True	AATAAA	-21	NA	37847425	37838835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
WTC11_00091416	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	15.2212844398888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	NA	False	NA	0	True	AATAAA	-21	NA	37847571	37838835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
WTC11_00091417	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.61743318211757	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220871	38149338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
WTC11_00091418	chrX	-	1777	9	FSM	ENSG00000101955.15	ENST00000538295.5	1780	9	0	3	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.6915959392744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220924	38149338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38149895_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
WTC11_00091419	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	7.7028133388609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	NA	False	NA	2	True	AATAAA	-27	NA	38327509	38269162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
WTC11_00091421	chrX	-	2559	18	FSM	ENSG00000156313.15	ENST00000644337.1	2559	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	10.6874437208903	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGTGTGACCAGTTT	NA	False	NA	NA	False	TTTAAA	-32	NA	38327535	38269496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
WTC11_00091424	chrX	-	1005	1	FSM	ENSG00000228232.1	ENST00000452570.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTGGACCACCAGCCC	NA	False	NA	NA	False	NA	NA	NA	39788136	39787131	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_39787100_39788100
WTC11_00091425	chrX	-	2365	4	FSM	ENSG00000183337.18	ENST00000672265.1	2184	4	-113	-68	-113	1	multi-exon	FALSE	canonical	3	132	junction_1	7.34846922834953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTACCTTGTGTCCCAT	NA	False	NA	-6	True	AATAAA	-23	NA	40056346	40051249	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367
WTC11_00091426	chrX	-	8180	14	ISM	ENSG00000183337.18	ENST00000413905.6	5233	15	-2151	1431	-2111	0	5prime_fragment	FALSE	canonical	3	74	junction_11	27.2040285913251	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40080080	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843
WTC11_00091428	chrX	-	6258	15	FSM	ENSG00000183337.18	ENST00000397354.7	6258	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	29.7122252032831	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40097403	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
WTC11_00091429	chrX	-	6940	15	FSM	ENSG00000183337.18	ENST00000378444.9	6910	15	-25	-5	-4	0	multi-exon	FALSE	canonical	3	51	junction_8	32.5018837758612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40097983	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
WTC11_00091431	chrX	-	6392	15	FSM	ENSG00000183337.18	ENST00000342274.8	6390	15	0	-2	0	0	multi-exon	FALSE	canonical	1	7	junction_14	37.7192231616502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40177329	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40177006
WTC11_00091436	chrX	-	740	2	NNC	ENSG00000183337.18	novel	288	2	NA	NA	-204	-66689	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATGTGCATGTGTCTT	NA	False	NA	-25	True	AATAAA	-17	NA	40146833	40144532	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40144907_40146467
WTC11_00091437	chrX	-	6464	32	NNC	ENSG00000180182.11	novel	7996	31	NA	NA	76	45394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.5832181028387	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGGGAGGCATCCCCA	NA	False	NA	NA	False	AAAAAG	-3	NA	40735222	40602910	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40602942_40649547_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
WTC11_00091438	chrX	-	4246	7	FSM	ENSG00000185753.13	ENST00000327877.10	4244	7	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_6	6.54896090146283	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTCGCATTTCCTG	NA	False	NA	2	True	AATAAA	-22	NA	40647561	40626918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40639129_40647006_40647142_40647304
WTC11_00091439	chrX	-	7935	31	FSM	ENSG00000180182.11	ENST00000324817.6	7996	31	0	61	0	-61	multi-exon	FALSE	canonical	3	113	junction_30	73.2540783847562	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACACAATTTTGACATGT	NA	False	NA	NA	False	NA	NA	NA	40735542	40648365	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
WTC11_00091440	chrX	-	557	4	FSM	ENSG00000180182.11	ENST00000416199.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	181.159230144828	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	40659334	40649542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40649673_40654363_40654557_40654934_40655061_40659226
WTC11_00091441	chrX	-	7381	28	ISM	ENSG00000180182.11	ENST00000324817.6	7996	31	19731	1238	-760	0	3prime_fragment	FALSE	canonical	3	227	junction_23	50.4808429078385	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	40715811	40649542	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536
WTC11_00091442	chrX	-	1480	6	FSM	ENSG00000180182.11	ENST00000433003.1	1480	6	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_5	49.1096731815637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGCTTTTTTGGGCT	NA	False	NA	-1	True	AATAAA	-16	NA	40664451	40653871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306
WTC11_00091445	chrX	-	931	1	FSM	ENSG00000216866.5	ENST00000397318.4	883	1	0	-48	0	48	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	40935864	40934933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40934900_40935900
WTC11_00091446	chrX	-	8371	25	FSM	ENSG00000147044.23	ENST00000421587.8	8220	25	-151	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	67.799016196566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTGTCTCCTCAGATT	NA	False	NA	-3	True	AATAAA	-19	NA	41923161	41514933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853096_41853228_41922929
WTC11_00091448	chrX	-	8843	25	FSM	ENSG00000147044.23	ENST00000378158.6	3754	25	-474	-4615	-64	0	multi-exon	FALSE	canonical	3	66	junction_7	51.6792827338856	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTGTCTCCTCAGATT	NA	False	NA	-3	True	AATAAA	-19	NA	41923618	41514933	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
WTC11_00091449	chrX	-	6048	26	FSM	ENSG00000147044.23	ENST00000644219.1	6048	26	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	42.4944984674487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGGTTGACCTACT	NA	False	NA	NA	False	TTTAAA	-19	NA	41923161	41517307	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
WTC11_00091451	chrX	-	823	1	FSM	ENSG00000217624.2	ENST00000405276.2	735	1	-18	-70	-18	70	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAAAGTTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	41676512	41675689	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41675700_41676500
WTC11_00091454	chrX	-	420	1	FSM	ENSG00000228847.1	ENST00000442175.1	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAGCCATCTCCACCT	NA	False	NA	NA	False	NA	NA	NA	42099173	42098753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_42098800_42099200
WTC11_00091455	chrX	-	2554	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	14	2	-1	-2	multi-exon	FALSE	canonical	2	6	junction_5	2.81848852242127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGCTGTCCTTTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	43882436	43766611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
WTC11_00091456	chrX	-	1742	4	FSM	ENSG00000069509.6	ENST00000483115.1	1069	4	-498	-175	57	42	multi-exon	FALSE	canonical	3	246	junction_2	8.99382504215469	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATAAGTGTAATAATTGT	NA	False	NA	38	True	NA	NA	NA	44542802	44523596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944
WTC11_00091457	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	31.855140872393	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	NA	False	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
WTC11_00091458	chrX	-	1218	5	NNC	ENSG00000069509.6	novel	1054	5	NA	NA	64	-44	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	100.472633089812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGTATGTGTCCATA	NA	False	NA	-24	True	AATAAA	-16	NA	44542795	44523815	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542399
WTC11_00091459	chrX	-	966	1	FSM	ENSG00000270069.2	ENST00000688264.1	970	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTACTGTTCTCTGTGT	NA	False	NA	-5	True	AATAAA	-25	NA	45746179	45745213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45745200_45746200
WTC11_00091460	chrX	-	1458	3	FSM	ENSG00000231566.3	ENST00000456532.2	1458	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACACTTACCAGTAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	45851541	45847041	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45848214_45849374_45849473_45851353
WTC11_00091462	chrX	-	5548	11	NNC	ENSG00000065923.10	novel	9971	17	NA	NA	15972	696	intron_retention	TRUE	canonical	0	0	junction_1	12.2069652248214	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCTTAAGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	46653714	46598554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_46602271_46606259_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608
WTC11_00091463	chrX	-	9062	11	NNC	ENSG00000065923.10	novel	9971	17	NA	NA	15972	696	intron_retention	FALSE	canonical	3	8	junction_1	9.91413132856328	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCTTAAGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	46653714	46598554	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_46601712_46602186_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608
WTC11_00091465	chrX	-	600	1	FSM	ENSG00000213997.3	ENST00000413837.1	737	1	-20	157	-20	-157	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTGCAGAGCAGAACC	NA	False	NA	NA	False	NA	NA	NA	46647350	46646750	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46646800_46647400
WTC11_00091466	chrX	-	1164	7	ISM	ENSG00000065923.10	ENST00000328306.4	3838	17	-92	56693	-29	-55716	5prime_fragment	FALSE	canonical	3	39	junction_4	3.05505046330389	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTAGTTTCAGCTCG	NA	False	NA	NA	False	NA	NA	NA	46759147	46662010	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
WTC11_00091467	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1468	junction_1	246	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47142441_47142613_47142745_47144472
WTC11_00091468	chrX	-	952	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	145	-328	0	multi-exon	FALSE	canonical	3	708	junction_1	626	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	47145038	47142215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47142441_47142583_47142745_47144472
WTC11_00091469	chrX	-	5459	5	FSM	ENSG00000147124.13	ENST00000313116.11	4297	5	0	-1162	0	461	multi-exon	FALSE	canonical	3	20	junction_4	14.4913767461894	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATACTACCCTTTC	NA	False	NA	54	True	NA	NA	NA	47482585	47444716	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482458
WTC11_00091470	chrX	-	2691	1	FSM	ENSG00000235636.1	ENST00000446295.1	882	1	-79	-1730	-79	1730	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCATTTGTAGTGCCGC	NA	False	NA	NA	False	NA	NA	NA	47513562	47510871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47510900_47513600
WTC11_00091471	chrX	-	3176	13	FSM	ENSG00000008056.14	ENST00000340666.5	3172	13	0	-4	0	4	multi-exon	FALSE	canonical	3	33	junction_1	6.43503863408933	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTCTTGGTGAAGA	NA	False	NA	3	True	AATAAA	-22	NA	47619857	47571896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47572962_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
WTC11_00091472	chrX	-	3214	13	FSM	ENSG00000008056.14	ENST00000295987.13	3210	13	0	-4	0	4	multi-exon	FALSE	canonical	3	16	junction_1	10.1447851956888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTCTTGGTGAAGA	NA	False	NA	3	True	AATAAA	-22	NA	47619857	47571896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47573000_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
WTC11_00091473	chrX	-	1017	6	FSM	ENSG00000008056.14	ENST00000639776.1	688	6	-470	141	0	-141	multi-exon	FALSE	canonical	1	1	junction_1	18.4347497948847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGTATCACATCAGGAG	NA	False	NA	NA	False	NA	NA	NA	47619857	47590095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47590210_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
WTC11_00091474	chrX	-	569	4	FSM	ENSG00000126759.14	ENST00000480317.1	569	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.24264068711928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCAGCAGTGCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	47629952	47628121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47628278_47628475_47628554_47629523_47629675_47629768
WTC11_00091475	chrX	-	2834	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	-139	0	-23	0	multi-exon	FALSE	canonical	3	129	junction_5	21.4326853193901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650627	47635520	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
WTC11_00091476	chrX	-	2941	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	-64	-1	-23	1	multi-exon	FALSE	canonical	3	42	junction_5	59.3784940492394	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGCTGCTGGCACTT	NA	False	NA	-4	True	AATATA	-17	NA	47650627	47635519	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
WTC11_00091477	chrX	-	582	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	-8	0	6	multi-exon	FALSE	canonical	3	400	junction_6	77.8388648997973	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTCTTTTTCCCCAT	NA	False	NA	2	True	ATTAAA	-25	NA	47659161	47651789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
WTC11_00091478	chrX	-	779	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	-6	0	6	multi-exon	FALSE	canonical	3	537	junction_5	37.4838631947135	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTCTTTTTCCCCAT	NA	False	NA	2	True	ATTAAA	-25	NA	47659180	47651789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
WTC11_00091479	chrX	-	3492	6	NIC	ENSG00000147118.12	novel	3586	7	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	15.2236657871881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003977	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003903
WTC11_00091480	chrX	-	3593	7	NIC	ENSG00000147118.12	novel	3499	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	14.1970262926979	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003908
WTC11_00091481	chrX	-	3164	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	25	286	19	-286	multi-exon	FALSE	canonical	2	2	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGGCATGAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	48071615	48057801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
WTC11_00091482	chrX	-	2019	18	NNC	ENSG00000017483.16	novel	1990	17	NA	NA	48	100831	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	79.0481873097354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCAGGGTAGTGCATGC	NA	False	NA	NA	False	ACTAAA	-28	NA	48469509	48357705	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48357720_48411506_48411528_48458543_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
WTC11_00091483	chrX	-	1798	15	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	141	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	64.7421888756332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469416	48458543	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
WTC11_00091484	chrX	-	2313	16	FSM	ENSG00000017483.16	ENST00000595796.5	2659	16	346	0	-274	0	multi-exon	FALSE	canonical	3	176	junction_15	28.3548937575157	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTTCTGATCTTTCT	NA	False	NA	-5	True	AATAAA	-23	NA	48469831	48458536	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
WTC11_00091485	chrX	-	1858	16	NIC	ENSG00000017483.16	novel	2659	16	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	57.7066913123792	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTTCTGATCTTTCT	NA	False	NA	-5	True	AATAAA	-23	NA	48468346	48458536	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
WTC11_00091486	chrX	-	879	11	FSM	ENSG00000017483.16	ENST00000440085.5	910	11	31	0	31	0	multi-exon	FALSE	canonical	1	18	junction_10	64.4797642675592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCTCTGCCGGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	48468280	48461730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468240
WTC11_00091487	chrX	-	892	11	FSM	ENSG00000017483.16	ENST00000441948.5	871	11	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_10	69.677543010643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCTCTGCCGGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	48468557	48461730	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468504
WTC11_00091490	chrX	-	657	1	FSM	ENSG00000233585.2	ENST00000646565.1	500	1	-160	3	-160	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATCTCCTGGCTGAGT	NA	False	NA	-3	True	AATAAA	-23	NA	48776303	48775646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48775600_48776300
WTC11_00091491	chrX	-	1025	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	6	-6	6	6	multi-exon	FALSE	canonical	3	63	junction_2	27.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCTGTGTGAGTGGC	NA	False	NA	-2	True	AATAAA	-21	NA	48835604	48831089	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48831456_48831868_48832342_48835418
WTC11_00091492	chrX	-	743	6	NNC	ENSG00000126768.12	novel	964	7	NA	NA	0	28509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	497.427381634747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCTGGGCACAGTGGC	NA	False	NA	NA	False	AAAAAG	-12	NA	48897762	48864937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48864971_48893450_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
WTC11_00091493	chrX	-	775	6	NNC	ENSG00000126768.12	novel	950	7	NA	NA	0	28509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	497.427381634747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCTGGGCACAGTGGC	NA	False	NA	NA	False	AAAAAG	-12	NA	48897790	48864937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48864971_48893446_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
WTC11_00091494	chrX	-	970	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	-6	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	427.19342483496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897768	48893446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
WTC11_00091495	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	446.540653866538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	NA	False	NA	-6	True	TTTAAA	-14	NA	48897790	48893452	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
WTC11_00091496	chrX	-	734	6	FSM	ENSG00000126768.12	ENST00000472645.1	804	6	70	0	70	0	multi-exon	FALSE	canonical	1	9	junction_5	401.503474455701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTCAGGGCACCCCA	NA	False	NA	-107	True	NA	NA	NA	48897158	48893553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897092
WTC11_00091498	chrX	-	2110	7	NNC	ENSG00000102096.9	novel	2075	6	NA	NA	0	14396	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	527.806467056502	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAATATCTATTCCCC	NA	False	NA	NA	False	NA	NA	NA	48919024	48898785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48898824_48913184_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
WTC11_00091499	chrX	-	3055	27	NNC	ENSG00000068400.13	novel	3031	26	NA	NA	0	74934	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	65.1415504699814	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAATATCTATTCCCC	NA	False	NA	NA	False	NA	NA	NA	49002249	48898785	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48898825_48973722_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
WTC11_00091500	chrX	-	1441	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	15	0	-14	multi-exon	FALSE	canonical	2	8	junction_1	68.3643730315725	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTATCTTGCCGACT	NA	False	NA	-23	True	AATAAA	-4	NA	48911646	48903197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
WTC11_00091501	chrX	-	886	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	-21	0	17	multi-exon	FALSE	canonical	2	8	junction_1	79.913625246262	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGAAGCACTCAGGTAT	NA	False	NA	12	True	AATAAA	-39	NA	48911646	48903162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
WTC11_00091502	chrX	-	3058	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	10	-21	10	17	multi-exon	FALSE	canonical	3	121	junction_1	29.6348143611905	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGAAGCACTCAGGTAT	NA	False	NA	12	True	AATAAA	-39	NA	48911948	48903162	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
WTC11_00091503	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	72.9566081082904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	NA	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
WTC11_00091508	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_3	92.5289143997702	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	NA	False	NA	-15	True	AATAAA	-17	NA	48919024	48913181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
WTC11_00091511	chrX	-	3868	10	NNC	ENSG00000068308.15	novel	2682	10	NA	NA	-3	27	intron_retention	FALSE	canonical	3	34	junction_8	128.971525233238	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTACCCTATTTCCTG	NA	False	NA	27	True	NA	NA	NA	48958389	48921996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48923299_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48936190_48936359_48944189_48944284_48956976
WTC11_00091512	chrX	-	2903	9	FSM	ENSG00000068308.15	ENST00000376488.8	2888	9	0	-15	0	15	multi-exon	FALSE	canonical	3	229	junction_7	43.7085517948147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCCCACCCCTGCCTA	NA	False	NA	15	True	NA	NA	NA	48957607	48922008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
WTC11_00091513	chrX	-	2701	10	FSM	ENSG00000068308.15	ENST00000396743.7	2682	10	0	-19	0	15	multi-exon	FALSE	canonical	3	47	junction_1	87.2609255956093	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCCCACCCCTGCCTA	NA	False	NA	15	True	NA	NA	NA	48957631	48922008	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
WTC11_00091515	chrX	-	2745	9	FSM	ENSG00000068308.15	ENST00000156084.8	2740	9	0	-5	0	0	multi-exon	TRUE	canonical	3	14	junction_5	100.57211343111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	NA	False	NA	-1	True	AATAAA	-22	NA	48957631	48922205	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
WTC11_00091518	chrX	-	3480	11	NNC	ENSG00000068323.17	novel	3291	10	NA	NA	-110	70085	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.8640596843697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCCGCGCCTGCGCA	NA	False	NA	NA	False	NA	NA	NA	49043520	48958640	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48958669_49028727_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
WTC11_00091519	chrX	-	2982	5	FSM	ENSG00000102057.10	ENST00000376477.5	3306	5	324	0	324	0	multi-exon	FALSE	canonical	3	26	junction_4	1.87082869338697	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGAGTATCTCCTGGCT	NA	False	NA	0	True	AATAAA	-21	NA	48968062	48961377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48962807_48966054_48966306_48966577_48966677_48966760_48966845_48966943
WTC11_00091520	chrX	-	4720	6	FSM	ENSG00000102057.10	ENST00000218176.4	4718	6	0	-2	0	0	multi-exon	FALSE	canonical	3	26	junction_4	2.60768096208106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGAGTATCTCCTGGCT	NA	False	NA	0	True	AATAAA	-21	NA	48971844	48961377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48962807_48966054_48966306_48966577_48966677_48966760_48966845_48966943_48967107_48969150
WTC11_00091521	chrX	-	2828	12	FSM	ENSG00000068400.13	ENST00000619149.4	2828	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_11	24.9889231659096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCGTCTCGTTCTTTT	NA	False	NA	-2	True	NA	NA	NA	48987817	48973719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48974286_48975154_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784
WTC11_00091523	chrX	-	3034	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	-3	0	0	multi-exon	FALSE	canonical	3	238	junction_16	31.7730955369476	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCGTCTCGTTCTTTT	NA	False	NA	-2	True	NA	NA	NA	49002264	48973719	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
WTC11_00091525	chrX	-	904	5	FSM	ENSG00000068400.13	ENST00000474512.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	9.21954445729289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAAGTCCCAGCAC	NA	False	NA	NA	False	NA	NA	NA	48988651	48983391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120
WTC11_00091527	chrX	-	3299	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	-8	0	8	multi-exon	FALSE	canonical	3	143	junction_8	26.3016687261052	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTTACACTGTG	NA	False	NA	5	True	NA	NA	NA	49043357	49028717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
WTC11_00091528	chrX	-	3287	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	-8	0	8	multi-exon	FALSE	canonical	3	70	junction_8	44.9265518566515	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTTACACTGTG	NA	False	NA	5	True	NA	NA	NA	49043410	49028717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
WTC11_00091529	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	NA	False	NA	-4	True	AATAAA	-24	NA	49074002	49071160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49072009_49072432_49072651_49073808
WTC11_00091531	chrX	-	2634	9	FSM	ENSG00000196998.19	ENST00000465806.6	2610	9	0	-24	0	24	multi-exon	FALSE	canonical	2	7	junction_8	43.7733866064759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGGAGAAATGTGACC	NA	False	NA	17	True	NA	NA	NA	49080097	49074408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49077912_49078040_49078113_49079938
WTC11_00091532	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.3225676151552	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079898	49074639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
WTC11_00091533	chrX	-	1313	10	FSM	ENSG00000196998.19	ENST00000485908.6	1301	10	6	-18	-2	0	multi-exon	FALSE	canonical	3	52	junction_7	27.5560035805872	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079905	49074639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
WTC11_00091534	chrX	-	1278	10	NIC	ENSG00000196998.19	novel	1381	11	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	42.8903281278376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACTTCTTGATGACTG	NA	False	NA	-5	True	AATAAA	-15	NA	49079870	49074642	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077836_49077912_49078040_49078113_49079750
WTC11_00091535	chrX	-	996	8	FSM	ENSG00000196998.19	ENST00000367375.8	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	44.014376130106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAAATAAAGAGCTCAC	NA	False	NA	-31	True	GGGGCT	-29	NA	49077746	49074668	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642
WTC11_00091536	chrX	-	1374	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	7	0	-7	0	multi-exon	FALSE	canonical	2	7	junction_7	42.5517332196939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	NA	False	NA	-66	True	NA	NA	NA	49079922	49074703	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
WTC11_00091543	chrX	-	1681	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	-23	0	23	multi-exon	FALSE	canonical	3	122	junction_8	6.64906008395172	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATGATGAGCTGCGA	NA	False	NA	1	True	AATAAA	-38	NA	49123735	49113383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
WTC11_00091544	chrX	-	2808	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	-13	0	13	multi-exon	FALSE	canonical	3	70	junction_3	6.59545297913646	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGCTGGGAATGTTG	NA	False	NA	2	True	AATAAA	-31	NA	49186373	49174788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
WTC11_00091545	chrX	-	582	3	FSM	ENSG00000012211.13	ENST00000614014.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGCTGTGGGCGGGCC	NA	False	NA	NA	False	NA	NA	NA	49179283	49177136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49177203_49177992_49178476_49179250
WTC11_00091546	chrX	-	986	7	FSM	ENSG00000012211.13	ENST00000432913.5	990	7	0	4	0	-4	multi-exon	FALSE	canonical	3	17	junction_6	24.6401884913425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGAATGCTGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	49184898	49177992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49184825
WTC11_00091547	chrX	-	806	4	FSM	ENSG00000012211.13	ENST00000376310.7	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCTCCTCCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	49186389	49179404	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49179807_49183733_49183918_49184624_49184711_49186255
WTC11_00091548	chrX	-	515	3	FSM	ENSG00000012211.13	ENST00000611313.1	547	3	0	32	0	-32	multi-exon	FALSE	canonical	3	81	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTCAGACCGAGGGT	NA	False	NA	NA	False	GGGGCT	-10	NA	49186392	49183625	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49183918_49184624_49184711_49186255
WTC11_00091549	chrX	-	2424	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	-3	0	3	multi-exon	FALSE	canonical	3	17	junction_4	4.7169905660283	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCGGCTCTGATTTCTCA	NA	False	NA	-8	True	AATAAA	-19	NA	49200193	49187811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
WTC11_00091551	chrX	-	2123	2	FSM	ENSG00000234390.4	ENST00000437322.2	2175	2	52	0	52	0	multi-exon	FALSE	canonical	2	3	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCGGTGAAACCTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	49879189	49876723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49878748_49879090
WTC11_00091552	chrX	-	1228	11	ISM	ENSG00000274588.2	ENST00000611977.2	7494	28	78375	14258	78375	-14258	internal_fragment	FALSE	canonical	2	9	junction_2	2.67581763205193	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTATCAACTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	50392450	50379666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_50379735_50379980_50380078_50382495_50382604_50384167_50384265_50384719_50384825_50386357_50386587_50387553_50387654_50388526_50388619_50390327_50390410_50391436_50391577_50392340
WTC11_00091553	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	NA	False	NA	-13	True	AATAAA	-15	NA	51496592	51490010	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51491750_51495950
WTC11_00091554	chrX	-	1923	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	-38	8	-38	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTAAAAGGGCCTGGATAC	NA	False	NA	-4	True	AATAAA	-23	NA	51618950	51617027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51617000_51619000
WTC11_00091555	chrX	-	1726	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	-110	4	-110	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTATGTGTGTTGGTGT	NA	False	NA	NA	False	AGTAAA	-11	NA	51682941	51681215	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51681200_51682900
WTC11_00091556	chrX	-	2928	13	NNC	ENSG00000187243.17	novel	2513	13	NA	NA	0	11924	intron_retention	FALSE	non_canonical	0	0	junction_1	341.097330521493	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACAAACCTGATGC	NA	False	NA	NA	False	AAAACA	-35	NA	52069172	52049902	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_52049921_52061829_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068204_52069129
WTC11_00091558	chrX	-	2383	14	NIC	ENSG00000187243.17	novel	2482	13	NA	NA	2	-3	intron_retention	TRUE	canonical	3	69	junction_11	361.59654197959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGATGTTTCTTCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	52069170	52061829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067402_52067485_52067699_52067962_52068174_52069129
WTC11_00091562	chrX	-	2577	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	1	-29	-1	multi-exon	FALSE	canonical	3	671	junction_12	171.506478659619	6798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGATGTTTCTTCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	52069248	52061827	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
WTC11_00091566	chrX	-	2953	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	-11	0	7	multi-exon	FALSE	canonical	3	80	junction_3	22.1058061754523	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCAGGTTTGTTCCTC	NA	False	NA	NA	False	AATAAA	-27	NA	52958414	52947246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
WTC11_00091567	chrX	-	3798	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	-7	0	7	multi-exon	FALSE	canonical	3	123	junction_2	3.5	9869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCAGGTTTGTTCCTC	NA	False	NA	NA	False	AATAAA	-27	NA	52958518	52947246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272
WTC11_00091568	chrX	-	2074	4	FSM	ENSG00000268350.8	ENST00000622323.5	2067	4	0	-7	0	7	multi-exon	FALSE	canonical	1	1	junction_3	59.23024752795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCAGGTTTGTTCCTC	NA	False	NA	NA	False	AATAAA	-27	NA	52995453	52947246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956756_52995414
WTC11_00091569	chrX	-	1082	1	FSM	ENSG00000231340.1	ENST00000428275.1	1082	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTAAATGGACTGCAAG	NA	False	NA	NA	False	NA	NA	NA	53143913	53142831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53142800_53143900
WTC11_00091570	chrX	-	167	1	FSM	ENSG00000227329.2	ENST00000421137.2	167	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATTTTCAGGAAATAGG	NA	False	NA	NA	False	NA	NA	NA	53164557	53164390	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53164400_53164600
WTC11_00091571	chrX	-	4745	26	FSM	ENSG00000126012.13	ENST00000688699.1	5170	26	32	393	0	-152	multi-exon	FALSE	canonical	1	4	junction_1	46.709313846384	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGAGTTGTGCAGCCA	NA	False	NA	-19	True	ATTAAA	-13	NA	53225176	53191472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53191623_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
WTC11_00091572	chrX	-	5810	26	FSM	ENSG00000126012.13	ENST00000375401.8	5810	26	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	33.9306587027131	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	NA	False	NA	-4	True	AATAAA	-25	NA	53225207	53192157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
WTC11_00091574	chrX	-	5227	26	FSM	ENSG00000126012.13	ENST00000375379.7	5245	26	18	0	18	0	multi-exon	FALSE	canonical	3	136	junction_10	31.0848130121447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTCAAGGATCCTC	NA	False	NA	NA	False	NA	NA	NA	53225404	53192928	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
WTC11_00091581	chrX	-	6021	14	FSM	ENSG00000124313.18	ENST00000640694.1	5958	14	-64	1	-33	0	multi-exon	FALSE	canonical	2	7	junction_12	6.36651744509494	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTCTGCCTCCTAC	NA	False	NA	-6	True	CATAAA	-16	NA	53321383	53232874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53235185_53236321_53236496_53238144_53238307_53239194_53239295_53241783_53241910_53243331_53243472_53246968_53247136_53248113_53248237_53248720_53248883_53250278_53251175_53254529_53254932_53255799_53256062_53291894_53291925_53320416
WTC11_00091582	chrX	-	6038	15	FSM	ENSG00000124313.18	ENST00000642864.1	6037	15	0	-1	0	0	multi-exon	TRUE	canonical	1	3	junction_2	7.98212288268514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTCTGCCTCCTAC	NA	False	NA	-6	True	CATAAA	-16	NA	53321350	53232874	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53235185_53235782_53235833_53236321_53236496_53238144_53238307_53239194_53239295_53241783_53241910_53243331_53243472_53246968_53247136_53248113_53248237_53248720_53248883_53250278_53251175_53254529_53254932_53255799_53256062_53291894_53291925_53320416
WTC11_00091584	chrX	-	1703	3	NIC	ENSG00000124313.18	novel	475	3	NA	NA	0	-2	intron_retention	FALSE	canonical	2	19	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGATGTATATTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	53321350	53266325	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53267065_53291894_53291925_53320416
WTC11_00091586	chrX	-	9838	25	FSM	ENSG00000072501.19	ENST00000675504.1	9826	25	0	-12	0	12	multi-exon	TRUE	canonical	3	15	junction_24	96.2652495134609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCCTTGGAATCTAAA	NA	False	NA	8	True	AATAAA	-26	NA	53422173	53374136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53421894
WTC11_00091587	chrX	-	9722	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	-12	0	12	multi-exon	FALSE	canonical	3	299	junction_24	56.1262063715932	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCCTTGGAATCTAAA	NA	False	NA	8	True	AATAAA	-26	NA	53422654	53374136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
WTC11_00091588	chrX	-	9922	26	FSM	ENSG00000072501.19	ENST00000375340.10	9930	26	20	-12	20	12	multi-exon	FALSE	canonical	2	4	junction_25	123.335873127002	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCCTTGGAATCTAAA	NA	False	NA	8	True	AATAAA	-26	NA	53422708	53374136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53421894_53422041_53422491
WTC11_00091589	chrX	-	9444	23	NIC	ENSG00000072501.19	novel	9930	26	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_22	86.8925074516766	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	NA	False	NA	-4	True	AATAAA	-14	NA	53422690	53374148	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53422491
WTC11_00091590	chrX	-	880	4	FSM	ENSG00000072501.19	ENST00000463684.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	141.656862405839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTCTGGAAGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	53422669	53411994	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53412254_53412899_53413139_53413231_53413436_53422491
WTC11_00091591	chrX	-	1054	2	FSM	ENSG00000072506.14	ENST00000684251.1	1060	2	0	6	0	-1	multi-exon	FALSE	canonical	3	824	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGTAGGCAGTGTTG	NA	False	NA	-9	True	AATAAA	-14	NA	53432447	53431263	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53432117_53432246
WTC11_00091592	chrX	-	972	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	-57	1	-43	-1	multi-exon	FALSE	canonical	3	117	junction_1	277.55821011096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGCAGTGTTGTGTGC	NA	False	NA	-4	True	AATAAA	-19	NA	53434413	53431258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
WTC11_00091593	chrX	-	956	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	-2	0	-1	multi-exon	FALSE	canonical	3	644	junction_5	73.6977611600244	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGCAGTGTTGTGTGC	NA	False	NA	-4	True	AATAAA	-19	NA	53434370	53431258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
WTC11_00091594	chrX	-	901	6	FSM	ENSG00000072506.14	ENST00000495986.2	901	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	376.552785144394	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAGAAGGCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	53434348	53431405	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434177
WTC11_00091595	chrX	-	856	4	FSM	ENSG00000072506.14	ENST00000684503.1	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	26.5497436689865	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTATGCTCACCTCGTA	NA	False	NA	NA	False	NA	NA	NA	53432768	53431498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246
WTC11_00091596	chrX	-	15236	84	NIC	ENSG00000086758.16	novel	14796	83	NA	NA	-7	229	combination_of_known_junctions	FALSE	canonical	3	38	junction_67	196.529727541457	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTTACTGAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	53684176	53531866	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
WTC11_00091597	chrX	-	4805	18	FSM	ENSG00000086758.16	ENST00000426907.5	4805	18	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_11	130.495674668804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53549505	53532095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958
WTC11_00091598	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_67	197.101869816266	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53684169	53532095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
WTC11_00091600	chrX	-	14731	84	FSM	ENSG00000086758.16	ENST00000262854.11	14731	84	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_83	197.641232798999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53686719	53532095	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686269_53686369_53686587
WTC11_00091601	chrX	-	4613	13	NIC	ENSG00000086758.16	novel	4805	18	NA	NA	115	-7	intron_retention	FALSE	canonical	3	12	junction_9	239.207531352078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAAGTGGTGCTTGCCT	NA	False	NA	-5	True	AATAAA	-20	NA	53549390	53532102	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53539656_53539813_53542442_53542540_53546435_53546593_53546703_53546826_53547672_53548274_53548958
WTC11_00091608	chrX	-	278	2	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53792354	53781576	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_53781796_53792295
WTC11_00091609	chrX	-	6357	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.6273700844844	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54044473	53936679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
WTC11_00091610	chrX	-	5916	22	FSM	ENSG00000172943.21	ENST00000357988.9	6024	22	104	4	104	0	multi-exon	FALSE	canonical	1	2	junction_21	21.9521227130767	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54045145	53936679	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54044874
WTC11_00091611	chrX	-	4653	22	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	20.9674188459434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54044174	53936679	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
WTC11_00091616	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	NA	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54174147_54182499
WTC11_00091617	chrX	-	11108	23	NNC	ENSG00000196632.11	novel	11172	23	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_22	6.55507500067412	10569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTAAAACTGGTTCTT	NA	False	NA	-7	True	ATTAAA	-25	NA	54358051	54192819	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_54198654_54201990_54202194_54232808_54233021_54236937_54237552_54238341_54238473_54239008_54239100_54248696_54249635_54249993_54250132_54251398_54251451_54251531_54251688_54253958_54254076_54255739_54255888_54259273_54259339_54292887_54293038_54293133_54293328_54294552_54294848_54298174_54298395_54301770_54301860_54307921_54308080_54309094_54309316_54311118_54311292_54333136_54333793_54357798
WTC11_00091618	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_15	21.3892900794722	3999	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	NA	False	NA	2	True	AATACA	-23	NA	54496234	54445453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
WTC11_00091619	chrX	-	1153	4	NIC	ENSG00000182518.14	novel	1179	4	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	86.9827569119305	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTCGGTCTGATCTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	55161129	55143108	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_55143876_55146180_55146312_55159128_55159229_55160974
WTC11_00091620	chrX	-	1065	4	FSM	ENSG00000182518.14	ENST00000332132.8	1067	4	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	98.346326825154	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTCTGATCTGTGTCTCT	NA	False	NA	-6	True	AATAAA	-20	NA	55161195	55143103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55143876_55146180_55146312_55159125_55159229_55161136
WTC11_00091621	chrX	-	1065	4	FSM	ENSG00000182518.14	ENST00000358460.8	1179	4	112	2	-3	-2	multi-exon	FALSE	canonical	3	30	junction_1	88.4646822183859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTCTGATCTGTGTCTCT	NA	False	NA	-6	True	AATAAA	-20	NA	55161198	55143103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55143876_55146180_55146312_55159128_55159229_55161136
WTC11_00091622	chrX	-	1233	3	FSM	ENSG00000182518.14	ENST00000425133.2	1229	3	-3	-1	-3	1	multi-exon	FALSE	canonical	0	0	junction_1	111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTAATACAGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	55161198	55145243	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159125_55159229_55161136
WTC11_00091623	chrX	-	1109	3	FSM	ENSG00000182518.14	ENST00000472571.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	87.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGCACAATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	55161182	55145355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159121_55159229_55161136
WTC11_00091624	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	93	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	NA	False	NA	NA	False	NA	NA	NA	55161119	55145386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159128_55159229_55160974
WTC11_00091625	chrX	-	666	3	NIC	ENSG00000182518.14	novel	1170	3	NA	NA	0	40	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTTATTTTAC	NA	False	NA	-12	True	AATAAA	-16	NA	55161119	55145897	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_55146312_55159121_55159229_55160974
WTC11_00091626	chrX	-	557	3	FSM	ENSG00000182518.14	ENST00000685693.1	3359	3	8	2794	5	42	multi-exon	FALSE	canonical	3	213	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTTATTTTACTC	NA	False	NA	-10	True	AATAAA	-18	NA	55161177	55145895	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159128_55159229_55161136
WTC11_00091627	chrX	-	232	1	FSM	ENSG00000237748.1	ENST00000421129.1	336	1	226	-122	226	122	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTATTCCAAACCTTATA	NA	False	NA	NA	False	AATAAA	-19	NA	56737351	56737119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56737100_56737400
WTC11_00091628	chrX	-	2840	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	18	-1238	0	-2	multi-exon	FALSE	canonical	3	38	junction_4	7.36121593216773	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATAAATCTTTTCAAA	NA	False	NA	-26	True	NA	NA	NA	56995507	56975143	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
WTC11_00091629	chrX	-	2928	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	13	-3	0	3	multi-exon	FALSE	canonical	3	40	junction_1	5.62916512459885	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGACTCTTTTCCT	NA	False	NA	1	True	AATAAA	-18	NA	56995542	56975116	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
WTC11_00091632	chrX	-	4443	2	FSM	ENSG00000204271.13	ENST00000374919.6	4445	2	2	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCCTGTGTATATTT	NA	False	NA	1	True	ATTAAA	-20	NA	56995539	56990830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56994950_56995215
WTC11_00091640	chrX	-	337	1	FSM	ENSG00000237708.1	ENST00000404529.2	772	1	563	-128	563	128	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATGCTGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	57069122	57068785	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57068800_57069100
WTC11_00091641	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121315	57119681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57120102_57120404_57120632_57121237
WTC11_00091642	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121491	57119681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57120635_57121292
WTC11_00091643	chrX	-	1261	2	FSM	ENSG00000186787.10	ENST00000434397.3	1261	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121548	57119681	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57120632_57121237
WTC11_00091644	chrX	-	1415	2	NNC	ENSG00000186787.10	novel	1258	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	NA	False	NA	-3	True	AATACA	-17	NA	57121546	57119682	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_57120632_57121080
WTC11_00091645	chrX	-	2602	1	FSM	ENSG00000147059.9	ENST00000374908.1	2468	1	175	-309	175	309	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAAAAGGGTCAAGGCT	NA	False	NA	NA	False	NA	NA	NA	57136822	57134220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57134200_57136800
WTC11_00091646	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	57137625	57135649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57136603_57137259
WTC11_00091647	chrX	-	5102	1	FSM	ENSG00000198205.7	ENST00000358697.6	5029	1	-50	-23	-50	23	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCATATTTATCATGAGT	NA	False	NA	NA	False	AATAAA	-40	NA	57910508	57905406	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57905400_57910500
WTC11_00091648	chrX	-	4119	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	-17	3	-17	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCAATTATCTTTGT	NA	False	NA	-12	True	AATAAA	-17	NA	63351349	63347230	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63347200_63351300
WTC11_00091649	chrX	-	5083	1	FSM	ENSG00000235437.9	ENST00000608623.1	5053	1	-34	4	-34	3	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGCTGCTTCTGTTCC	NA	False	NA	-11	True	AATAAA	-11	NA	63431646	63426563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426600_63431600
WTC11_00091650	chrX	-	2968	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	5	0	3	multi-exon	FALSE	canonical	3	44	junction_2	16.739839372653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGCTGCTTCTGTTCC	NA	False	NA	-11	True	AATAAA	-11	NA	63561080	63426563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
WTC11_00091651	chrX	-	974	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	6	0	3	multi-exon	FALSE	canonical	3	44	junction_2	18.6607133363712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGCTGCTTCTGTTCC	NA	False	NA	-11	True	AATAAA	-11	NA	63561071	63426563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
WTC11_00091652	chrX	-	3103	5	FSM	ENSG00000235437.9	ENST00000662156.1	3088	5	4	-19	0	2	multi-exon	TRUE	canonical	3	17	junction_2	29.2179311382582	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGTTCCGTTCTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	63561071	63426555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63516909_63517083_63560831
WTC11_00091653	chrX	-	810	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	6	0	3	multi-exon	FALSE	canonical	3	47	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGCTGCTTCTGTTCC	NA	False	NA	-11	True	AATAAA	-11	NA	63561080	63426563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426997_63432363_63432492_63560831
WTC11_00091654	chrX	-	2808	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	2	6	2	3	multi-exon	FALSE	canonical	3	64	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGCTGCTTCTGTTCC	NA	False	NA	-11	True	AATAAA	-11	NA	63561093	63426563	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63560831
WTC11_00091657	chrX	-	5134	11	FSM	ENSG00000131089.17	ENST00000671907.1	5117	11	0	-17	0	0	multi-exon	FALSE	canonical	3	10	junction_10	51.8185295044157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63755078	63634966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303_63754677_63754920
WTC11_00091658	chrX	-	5413	10	FSM	ENSG00000131089.17	ENST00000253401.10	5413	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	40.6612018186051	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63755113	63634966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303
WTC11_00091659	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	13.3979913733181	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63785214	63634966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
WTC11_00091661	chrX	-	5304	10	FSM	ENSG00000131089.17	ENST00000624538.2	5285	10	0	-19	0	0	multi-exon	FALSE	canonical	3	19	junction_9	38.8215289641084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTAAAAAGACACCT	NA	False	NA	-17	True	NA	NA	NA	63755032	63634983	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
WTC11_00091663	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	42.1973611017397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	63755078	63637839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
WTC11_00091668	chrX	-	2712	1	ISM	ENSG00000184675.11	ENST00000374869.8	8407	2	17880	0	17880	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTGCATTCTTGTGGT	NA	False	NA	-2	True	AATAAA	-32	NA	64187828	64185116	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_64185100_64187800
WTC11_00091669	chrX	-	1616	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	5	63296	5	37	5prime_fragment	FALSE	canonical	3	30	junction_3	10.0319489631876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCATCTGTAAAATAGG	NA	False	NA	23	True	CATAAA	-41	NA	64395447	64331376	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
WTC11_00091670	chrX	-	2693	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	31	0	-31	multi-exon	FALSE	canonical	3	113	junction_1	20.3270140453535	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCCTCAGTGTCCT	NA	False	NA	NA	False	AATAAA	-4	NA	64976450	64915837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
WTC11_00091671	chrX	-	2712	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	-104	-2002	-60	-31	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCCTCAGTGTCCT	NA	False	NA	NA	False	AATAAA	-4	NA	65034773	64915837	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
WTC11_00091674	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	75.867574687009	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534754	65512581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00091676	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	223.859687669115	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534787	65512581	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00091677	chrX	-	3441	14	FSM	ENSG00000001497.18	ENST00000677986.1	3441	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	331.288429723465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGTTTTGGTGTTTGT	NA	False	NA	-11	True	AATAAA	-7	NA	65534806	65512587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65520701_65520818_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00091678	chrX	-	6366	15	FSM	ENSG00000001497.18	ENST00000679056.1	6355	15	4	-15	0	0	multi-exon	FALSE	canonical	3	3	junction_3	326.614584387614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGTTTTGGTGTTTGT	NA	False	NA	-11	True	AATAAA	-7	NA	65534806	65512587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65522286_65522430_65522494_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00091680	chrX	-	258	1	FSM	ENSG00000217835.3	ENST00000456392.1	908	1	727	-77	727	77	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTACTAAAAGGAAAAATT	NA	False	NA	NA	False	AAAAAG	-30	NA	65956469	65956211	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65956200_65956500
WTC11_00091681	chrX	-	310	2	Genic_Genomic	ENSG00000217835.3	novel	908	1	NA	NA	-2812	-337	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTCCACCTCGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	65960008	65956625	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_65956925_65959997
WTC11_00091682	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	22.512342293852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	NA	False	NA	-35	True	AATAAA	-19	NA	66639078	66595636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
WTC11_00091683	chrX	-	3469	7	FSM	ENSG00000131080.15	ENST00000451436.6	3464	7	0	-5	0	0	multi-exon	FALSE	canonical	2	10	junction_2	23.7954243967663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	NA	False	NA	-35	True	AATAAA	-19	NA	66639298	66595636	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
WTC11_00091684	chrX	-	228	1	FSM	ENSG00000260118.1	ENST00000561973.1	1432	1	228	976	228	-976	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGAAACTATTATCCTT	NA	False	NA	NA	False	NA	NA	NA	68014673	68014445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68014400_68014700
WTC11_00091685	chrX	-	691	1	FSM	ENSG00000228328.2	ENST00000426382.2	1248	1	425	132	425	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGCCACTTGCTGTGC	NA	False	NA	NA	False	GGGGCT	-24	NA	68071342	68070651	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68070700_68071300
WTC11_00091686	chrX	-	3475	1	FSM	ENSG00000079482.14	ENST00000679394.1	3475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAACTAGAAAAGCAAG	NA	False	NA	NA	False	AATAGA	-19	NA	68383984	68380509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68380500_68384000
WTC11_00091687	chrX	-	2371	2	FSM	ENSG00000181191.12	ENST00000374571.5	2362	2	4	-13	0	3	multi-exon	FALSE	canonical	3	233	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTGGTTTTGTCTGA	NA	False	NA	-19	True	ATTAAA	-32	NA	69165449	69160847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69163141_69165371
WTC11_00091688	chrX	-	2745	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	24	-14	24	3	multi-exon	FALSE	canonical	3	102	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTGGTTTTGTCTGA	NA	False	NA	-19	True	ATTAAA	-32	NA	69165497	69160847	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69163467_69165371
WTC11_00091689	chrX	-	537	1	FSM	ENSG00000233229.1	ENST00000429006.1	852	1	101	214	101	-214	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAGTTAGAGCTGGCAT	NA	False	NA	NA	False	NA	NA	NA	69937916	69937379	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69937400_69937900
WTC11_00091690	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_6	33.543090031911	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289927	70286594	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
WTC11_00091691	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	159.68489379438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	NA	False	NA	NA	False	NA	NA	NA	70289945	70286891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
WTC11_00091693	chrX	-	2253	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	-14	0	14	multi-exon	FALSE	canonical	3	194	junction_11	83.7516004534385	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTGCTAAAGATGTAGA	NA	False	NA	-9	True	AATAAA	-15	NA	70931096	70925564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
WTC11_00091694	chrX	-	2240	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	-5	0	-4	multi-exon	FALSE	canonical	3	213	junction_11	78.9273125170053	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGTGTCCTGTTTTTT	NA	False	NA	-27	True	ATTAAA	-15	NA	70931125	70925582	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
WTC11_00091695	chrX	-	2944	1	Genic_Genomic	ENSG00000147164.12	novel	NA	NA	NA	NA	5414	1758	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCAGTGTGTAAGTA	NA	False	NA	-5	True	TATAAA	-17	NA	71057517	71054573	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_71054600_71057500
WTC11_00091696	chrX	-	2299	4	FSM	ENSG00000147164.12	ENST00000374274.8	2286	4	0	-13	0	10	multi-exon	FALSE	canonical	3	17	junction_3	2.49443825784929	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAAGTTGTAAATTTAG	NA	False	NA	-5	True	ATTAAA	-28	NA	71068334	71059233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068141
WTC11_00091697	chrX	-	2316	7	NNC	ENSG00000147130.14	novel	5536	25	NA	NA	0	18733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9150387019694	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAACAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71244470	71220890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71220917_71239627_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301
WTC11_00091699	chrX	-	5543	25	FSM	ENSG00000147130.14	ENST00000314425.9	5536	25	0	-7	0	7	multi-exon	FALSE	canonical	3	75	junction_11	43.8482230730809	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTGATGGATATA	NA	False	NA	0	True	AATAAA	-22	NA	71254140	71239616	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
WTC11_00091700	chrX	-	5594	25	NIC	ENSG00000147130.14	novel	5536	25	NA	NA	-76	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_24	50.5783049395248	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTTTTCTGGGTGA	NA	False	NA	-8	True	AATAAA	-14	NA	71254651	71239624	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
WTC11_00091701	chrX	-	5460	25	NNC	ENSG00000147130.14	novel	5536	25	NA	NA	-120	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_24	47.2757131681327	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTTTTCTGGGTGA	NA	False	NA	-8	True	AATAAA	-14	NA	71254695	71239624	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254658
WTC11_00091702	chrX	-	1851	7	ISM	ENSG00000147130.14	ENST00000489332.1	5723	24	0	9572	0	3	5prime_fragment	FALSE	canonical	3	116	junction_3	13.9642400437689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTCTCCTTCCCCAT	NA	False	NA	3	True	AATAAA	-21	NA	71254127	71249197	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
WTC11_00091703	chrX	-	1848	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	-7	0	4	multi-exon	FALSE	canonical	2	14	junction_6	48.1678200553947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTCCTTCCCCATC	NA	False	NA	4	True	AATAAA	-22	NA	71254575	71249196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
WTC11_00091704	chrX	-	4206	2	FSM	ENSG00000242732.4	ENST00000479991.1	4339	2	118	15	45	-15	multi-exon	FALSE	canonical	1	1	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGTGTGTAAAGATTG	NA	False	NA	-14	True	AATAAA	-5	NA	72131783	72127124	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72127711_72128163
WTC11_00091705	chrX	-	7144	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	-14	-2786	-14	2786	multi-exon	FALSE	canonical	2	3	junction_2	2	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTGTTTGTGCGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72239041	72201870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72208699_72237830_72237949_72238843
WTC11_00091706	chrX	-	4228	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	-10	0	2	multi-exon	FALSE	canonical	3	134	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTTGTTTCACTGAGA	NA	False	NA	-3	True	ATTAAA	-25	NA	72239027	72204654	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72208699_72238843
WTC11_00091707	chrX	-	934	8	NNC	ENSG00000198034.11	novel	1474	7	NA	NA	0	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4416.5061128564	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATACCAGAATATTTAT	NA	False	NA	NA	False	NA	NA	NA	72277248	72250736	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72250758_72272602_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
WTC11_00091708	chrX	-	1476	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	-2	0	2	multi-exon	FALSE	canonical	3	9294	junction_6	1390.4663985712	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGGTCATGTCAGGCTT	NA	False	NA	NA	False	CATAAA	-23	NA	72277248	72272039	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
WTC11_00091709	chrX	-	1820	5	FSM	ENSG00000198034.11	ENST00000486733.2	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	11764	junction_3	752.902508629105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAAAGACTGGC	NA	False	NA	-128	True	NA	NA	NA	72276227	72272712	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72272773_72273231_72273390_72273800_72275151_72275543_72275725_72276156
WTC11_00091711	chrX	-	1099	4	NNC	ENSG00000125931.11	novel	716	4	NA	NA	85	10879	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.87400787401181	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACACCTCTCAATACA	NA	False	NA	NA	False	NA	NA	NA	72306822	72290758	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72290789_72301646_72302245_72302809_72302935_72306476
WTC11_00091712	chrX	-	1754	11	FSM	ENSG00000147099.21	ENST00000373573.9	1754	11	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_5	51.2722146976313	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572843	72329515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091713	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.5264388523411	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091715	chrX	-	1352	6	FSM	ENSG00000147099.21	ENST00000650604.1	1367	6	23	-8	21	0	multi-exon	FALSE	canonical	0	0	junction_4	67.2386793445558	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-15	True	NA	NA	NA	72573058	72329559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72572056_72572110_72572650
WTC11_00091716	chrX	-	1652	9	FSM	ENSG00000147099.21	ENST00000373589.9	1695	9	43	0	21	0	multi-exon	FALSE	canonical	1	3	junction_7	56.2088738545792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-15	True	NA	NA	NA	72573058	72329559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
WTC11_00091719	chrX	-	2389	8	FSM	ENSG00000147099.21	ENST00000439122.7	2373	8	0	-16	0	16	multi-exon	FALSE	canonical	1	26	junction_1	71.5829759718021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTCTCATTCATGGA	NA	False	NA	1	True	AATAAA	-34	NA	72573083	72473399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72474730_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091721	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	87.8674427760362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	NA	False	NA	-2	True	TATAAA	-17	NA	72572816	72562219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091722	chrX	-	748	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	-1	0	1	multi-exon	FALSE	canonical	3	49	junction_1	69.4712170614565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTAAATTCCTTTT	NA	False	NA	0	True	AATAAA	-22	NA	72572856	72567580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091723	chrX	-	837	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	-1	0	1	multi-exon	FALSE	canonical	3	188	junction_2	13.9283882771841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTAAATTCCTTTT	NA	False	NA	0	True	AATAAA	-22	NA	72572853	72567580	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00091724	chrX	-	6117	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	4	0	-4	multi-exon	TRUE	canonical	3	27	junction_22	6.70290152761391	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACATGTGTTTTTGTGA	NA	False	NA	-6	True	ATTAAA	-26	NA	72714181	72578818	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
WTC11_00091725	chrX	-	6261	32	FSM	ENSG00000067177.15	ENST00000373542.9	6286	32	8	17	8	-16	multi-exon	FALSE	canonical	1	1	junction_4	12.0855431734832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTGCAAAACTTCACAT	NA	False	NA	-18	True	AATAAA	-35	NA	72714298	72578830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72601990_72602030_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
WTC11_00091726	chrX	-	6108	32	NNC	ENSG00000067177.15	novel	6286	32	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_31	7.72093927095703	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACATGTGTTTTTGTGA	NA	False	NA	-6	True	ATTAAA	-26	NA	72714281	72578818	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802_72713942_72714050
WTC11_00091727	chrX	-	2065	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	-21	0	21	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGGTTTCATTATGCT	NA	False	NA	12	True	AATAAA	-38	NA	73128080	73126015	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73126000_73128100
WTC11_00091728	chrX	-	2562	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	-28	19	-28	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTCTCATGTTTAAAAC	NA	False	NA	-27	True	AATAAA	-17	NA	73214879	73212317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73212300_73214900
WTC11_00091729	chrX	-	8275	6	FSM	ENSG00000230590.12	ENST00000654870.2	3111	6	-24	-5140	-11	-5	multi-exon	FALSE	canonical	1	4	junction_1	14.1081536708387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGGTTTATTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	74292631	74196355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
WTC11_00091730	chrX	-	8227	6	FSM	ENSG00000230590.12	ENST00000661335.1	1909	6	1	-6319	0	-5	multi-exon	FALSE	canonical	2	14	junction_1	10.3846039885977	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGGTTTATTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	74293552	74196355	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
WTC11_00091731	chrX	-	1929	6	FSM	ENSG00000230590.12	ENST00000665069.1	1958	6	33	-4	24	0	multi-exon	TRUE	canonical	1	3	junction_5	16.7164589551735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACCACTGATTTATGTT	NA	False	NA	NA	False	AATAAA	-44	NA	74292318	74202646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292168
WTC11_00091732	chrX	-	8188	6	FSM	ENSG00000230590.12	ENST00000687056.1	3054	6	9	-5143	0	0	multi-exon	FALSE	canonical	2	14	junction_1	11.3771701226623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTATTTTCTTATTG	NA	False	NA	NA	False	AATAAA	-24	NA	74292583	74196350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
WTC11_00091733	chrX	-	1996	6	FSM	ENSG00000230590.12	ENST00000652331.2	1996	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	13.6176356244394	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACCACTGATTTATGTT	NA	False	NA	NA	False	AATAAA	-44	NA	74293568	74202646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
WTC11_00091734	chrX	-	1925	6	FSM	ENSG00000230590.12	ENST00000664123.1	1925	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	14.1081536708387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCACCCCTATTTTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	74293552	74202674	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203910_74274341_74274411_74280376_74280495_74280930_74281086_74281701_74281849_74293351
WTC11_00091735	chrX	-	1627	6	FSM	ENSG00000230590.12	ENST00000656977.1	1627	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.0146595032988	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTCTTTTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	74293503	74246421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74247425_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
WTC11_00091740	chrX	-	10620	5	FSM	ENSG00000131263.13_ENSG00000230673.3	ENST00000349225.2	3478	5	0	-7142	0	0	multi-exon	FALSE	canonical	3	43	junction_3	37.9143772202578	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	NA	False	NA	NA	False	TATAAA	-15	NA	74614617	74582975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
WTC11_00091741	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	25.4863798048204	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	NA	False	NA	NA	False	TATAAA	-15	NA	74614624	74582975	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
WTC11_00091742	chrX	-	5998	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	-21	-1385	-18	1385	multi-exon	FALSE	canonical	3	128	junction_15	36.9407934703929	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCAGTCAGAGAGGCC	NA	False	NA	NA	False	ATTAAA	-20	NA	75156304	75049662	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
WTC11_00091743	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	41.7846330073097	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
WTC11_00091744	chrX	-	4736	1	FSM	ENSG00000232186.1	ENST00000432946.1	1228	1	-1787	-1721	-1787	1721	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGAAATCATAACTGAG	NA	False	NA	NA	False	NA	NA	NA	75329786	75325050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75325000_75329800
WTC11_00091745	chrX	-	5578	12	FSM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.3494456849386	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	75523037	75368426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
WTC11_00091746	chrX	-	6016	11	FSM	ENSG00000102383.14	ENST00000541184.1	6012	11	0	-4	0	0	multi-exon	FALSE	canonical	3	11	junction_10	8.46167832052247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	75523502	75368426	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75522888
WTC11_00091747	chrX	-	1726	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	227	535	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTGCTTTGTGTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	75523275	75500956	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_75502269_75505820_75505848_75522888
WTC11_00091748	chrX	-	1005	1	FSM	ENSG00000213684.4	ENST00000456969.2	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGAGCTCTAGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	76335845	76334840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_76334800_76335800
WTC11_00091749	chrX	-	11165	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_29	69.6999997517785	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77786216	77504879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00091750	chrX	-	6658	18	FSM	ENSG00000085224.23	ENST00000675732.1	5847	18	22	-833	22	0	multi-exon	FALSE	canonical	3	120	junction_10	32.9867332040329	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77634229	77504879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565
WTC11_00091751	chrX	-	11051	34	FSM	ENSG00000085224.23	ENST00000395603.7	10218	34	0	-833	0	0	multi-exon	FALSE	canonical	2	2	junction_29	70.746160911717	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77786216	77504879	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00091753	chrX	-	9203	36	NIC	ENSG00000085224.23	novel	10455	36	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_30	72.0237829201053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAAACTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	77786208	77506904	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77595711_77595786_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688925_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00091758	chrX	-	6274	10	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	20	169076	8	-2	5prime_fragment	FALSE	canonical	3	31	junction_4	21.7073691760013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTCAAGCATTTA	NA	False	NA	-2	True	AATAAA	-15	NA	77786196	77673955	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00091759	chrX	-	6153	9	ISM	ENSG00000085224.23	ENST00000395603.7	10218	34	23	168247	11	-6	5prime_fragment	FALSE	canonical	2	2	junction_4	29.567718883945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCTTGTTCAAGCA	NA	False	NA	-6	True	AATAAA	-11	NA	77786193	77673959	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00091763	chrX	-	3409	13	NNC	ENSG00000102158.22	novel	2535	13	NA	NA	0	109638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.2209582230685	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGACATGGTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	77895424	77716108	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_77716137_77738558_77738582_77826367_77828038_77828553_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
WTC11_00091765	chrX	-	4466	10	FSM	ENSG00000102158.22	ENST00000618282.5	4506	10	0	40	0	-40	multi-exon	FALSE	canonical	3	160	junction_7	12.5619452767397	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATTATGCAAAATATTA	NA	False	NA	NA	False	AGTAAA	-45	NA	77895435	77825786	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
WTC11_00091766	chrX	-	1589	1	FSM	ENSG00000226784.3	ENST00000458128.3	1690	1	51	50	51	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCAGATCAGTATAAT	NA	False	NA	NA	False	ACTAAA	-4	NA	77969587	77967998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77968000_77969600
WTC11_00091767	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	39.8138027433815	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	NA	False	NA	-30	True	AATAAA	-13	NA	78139650	78129747	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
WTC11_00091768	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	21.7678662252413	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367334	79360383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
WTC11_00091769	chrX	-	1702	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	-4	0	0	multi-exon	FALSE	canonical	3	78	junction_4	130.352167224024	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367552	79360383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
WTC11_00091771	chrX	-	6761	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	24	28	24	-28	multi-exon	TRUE	non_canonical	0	0	junction_1	2.75680975041804	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAATAAACTTTATTAT	NA	False	NA	-31	True	NA	NA	NA	80335340	80228516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
WTC11_00091772	chrX	-	12886	41	FSM	ENSG00000165288.11	ENST00000373275.5	12921	41	58	-23	58	23	multi-exon	TRUE	canonical	3	12	junction_31	14.9346702340561	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTACGTTTAATTTATAAA	NA	False	NA	4	True	AATGAA	-24	NA	80809819	80669479	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915_80730021_80733455_80733497_80734117_80734219_80735126_80735198_80735987_80736089_80744031_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
WTC11_00091773	chrX	-	2767	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	-42	-2147	-37	792	multi-exon	TRUE	canonical	3	338	junction_4	20.3115730557729	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGTTTTTTTTGTGGAT	NA	False	NA	8	True	TATAAA	-24	NA	81121725	81112906	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
WTC11_00091774	chrX	-	742	4	FSM	ENSG00000198157.11	ENST00000447319.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	175.789647021661	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGATGTAAAAGT	NA	False	NA	17	True	GATAAA	-4	NA	81121688	81114834	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81121534
WTC11_00091776	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	149.368001928124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	NA	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
WTC11_00091777	chrX	-	206	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	882	27	882	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACTGATTTGCTCAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	83749057	83748851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83748900_83749100
WTC11_00091778	chrX	-	267	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	85	763	85	-763	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGAAAATGGCAACTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	83749854	83749587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83749600_83749900
WTC11_00091779	chrX	-	8464	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	0	1	0	-1	multi-exon	TRUE	canonical	3	51	junction_10	9.17207632583725	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACCGTTGACCTCGC	NA	False	NA	-12	True	AATAAA	-20	NA	84188199	84058350	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
WTC11_00091780	chrX	-	6196	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	4	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.76280110217331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
WTC11_00091781	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	11.3859562619922	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
WTC11_00091782	chrX	-	6158	10	FSM	ENSG00000165259.14	ENST00000506585.6	6158	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1513094351043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84488023_84488133_84502341
WTC11_00091785	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	7.45325569185462	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	NA	False	NA	0	True	AATAAA	-20	NA	86047558	85861179	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
WTC11_00091786	chrX	-	2816	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	5	0	-5	multi-exon	FALSE	canonical	2	8	junction_1	20.5243757517738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCTACTGATTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	86047539	85969091	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
WTC11_00091788	chrX	-	931	1	FSM	ENSG00000237506.3	ENST00000448168.1	861	1	-70	0	-70	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTGCATAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	87704273	87703342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_87703300_87704300
WTC11_00091789	chrX	-	577	2	FSM	ENSG00000289575.1	ENST00000691872.1	521	2	-56	0	-56	0	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCAAGCCTGAATTTT	NA	False	NA	2	True	AATAAA	-26	NA	87728735	87723927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_87724213_87728443
WTC11_00091790	chrX	-	412	1	FSM	ENSG00000227581.2	ENST00000453704.2	622	1	232	-22	232	22	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAATTTGTTTGCCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	90039602	90039190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_90039200_90039600
WTC11_00091791	chrX	-	4593	2	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2073	at_least_one_novel_splicesite	FALSE	canonical	3	824	junction_1	0	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACACTGGTGCAAGAA	NA	False	NA	NA	False	CATAAA	-34	NA	92105541	92098202	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92103446
WTC11_00091792	chrX	-	2242	2	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-750	1591	at_least_one_novel_splicesite	FALSE	canonical	3	1533	junction_1	0	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGTGAAACTCTGTC	NA	False	NA	NA	False	NA	NA	NA	92105518	92098684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92105292
WTC11_00091793	chrX	-	1901	4	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-750	1591	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	330.645160590961	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGTGAAACTCTGTC	NA	False	NA	NA	False	NA	NA	NA	92105518	92098684	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92099588_92100187_92100701_92103446_92103706_92105292
WTC11_00091795	chrX	-	555	1	FSM	ENSG00000234322.1	ENST00000456632.1	1027	1	475	-3	475	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGATAAATAATGCCC	NA	False	NA	NA	False	AGTAAA	-34	NA	93288284	93287729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93287700_93288300
WTC11_00091796	chrX	-	2665	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	-16	0	16	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATAAAAGAGGGATGCT	NA	False	NA	NA	False	AATAAA	-43	NA	93673578	93670913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93670900_93673600
WTC11_00091797	chrX	-	7616	4	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_3	23.2283351869125	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94704782	94670878	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94676067_94697895_94698010_94702006_94704244_94704705
WTC11_00091798	chrX	-	918	1	FSM	ENSG00000232842.2	ENST00000444292.2	988	1	62	8	62	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTAAAGCGACCTGTCA	NA	False	NA	NA	False	AATAAA	-41	NA	95974253	95973335	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_95973300_95974300
WTC11_00091799	chrX	-	493	4	Antisense	novelGene_ENSG00000281566.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGAAGCAGCAGAGCC	NA	False	NA	NA	False	AAGAAA	-31	NA	98524461	98514234	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_98514309_98515560_98515666_98522366_98522463_98524243
WTC11_00091800	chrX	-	438	1	FSM	ENSG00000230592.2	ENST00000429844.2	889	1	166	285	166	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTCTACAGGGATCCT	NA	False	NA	NA	False	NA	NA	NA	100156607	100156169	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100156200_100156600
WTC11_00091801	chrX	-	2063	9	NNC	ENSG00000000003.15	novel	3768	8	NA	NA	0	82282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.459317787493	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	AAAAAG	-1	NA	100636689	100544825	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_100544854_100628723_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
WTC11_00091802	chrX	-	3992	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	-86	-138	-86	138	multi-exon	FALSE	canonical	3	996	junction_7	68.3493427405211	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACACCTGTAATCCCA	NA	False	NA	NA	False	NA	NA	NA	100636892	100626969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
WTC11_00091804	chrX	-	2013	1	Genic_Genomic	ENSG00000007952.18	novel	NA	NA	NA	NA	6802	1802	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTTGATTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	100843534	100841521	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_100841500_100843500
WTC11_00091806	chrX	-	3551	14	FSM	ENSG00000188917.15	ENST00000372936.4	3547	14	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_13	36.9868039797852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-23	NA	101052111	101009345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051250_101051734_101051816
WTC11_00091807	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	30.727634142576	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-23	NA	101052116	101009345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
WTC11_00091808	chrX	-	2921	14	FSM	ENSG00000188917.15	ENST00000372935.5	2921	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	39.3915258360514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTAGTTATCCCTAG	NA	False	NA	NA	False	NA	NA	NA	101052070	101009541	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051643_101051734_101051816
WTC11_00091809	chrX	-	771	7	FSM	ENSG00000188917.15	ENST00000478422.1	771	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	42.2597786185504	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCCTGCCTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	101052082	101023585	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042232_101042313_101051783
WTC11_00091810	chrX	-	3525	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	-252	-322	-252	322	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCCATGAAATCTGGG	NA	False	NA	NA	False	NA	NA	NA	101348994	101345338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101348402_101348532
WTC11_00091811	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101346661_101348532
WTC11_00091812	chrX	-	3324	4	FSM	ENSG00000102393.14	ENST00000468823.2	3748	4	0	424	0	-424	multi-exon	FALSE	canonical	3	232	junction_1	31.0519278342299	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACAGAGCAAGACTC	NA	False	NA	NA	False	NA	NA	NA	101407964	101397196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398947_101400665_101401810_101403810_101403986_101407709
WTC11_00091813	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	26.4033878297632	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407925	101397802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
WTC11_00091814	chrX	-	4167	4	FSM	ENSG00000102393.14	ENST00000675968.1	4163	4	0	-4	0	0	multi-exon	FALSE	canonical	3	240	junction_1	28.5773803324704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407964	101397802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101401810_101403810_101403986_101407709
WTC11_00091817	chrX	-	526	1	FSM	ENSG00000237682.2	ENST00000392722.3	1792	1	589	677	589	-677	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGGGATAATTTATAG	NA	False	NA	NA	False	NA	NA	NA	101538687	101538161	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101538200_101538700
WTC11_00091818	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	19.6015872373189	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
WTC11_00091819	chrX	-	1847	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	-7	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101618000	101615117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101616767_101617502_101617585_101617884
WTC11_00091821	chrX	-	2751	3	FSM	ENSG00000184867.14	ENST00000433318.5	854	3	-85	-1812	-57	0	multi-exon	FALSE	canonical	3	275	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101658706	101655280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460
WTC11_00091822	chrX	-	2819	6	FSM	ENSG00000184867.14	ENST00000356824.9	2819	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	38.8710689330767	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659850	101655280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659502_101659757
WTC11_00091823	chrX	-	2833	6	NNC	ENSG00000184867.14	novel	2819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	104.661358676448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659831	101655280	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659535_101659757
WTC11_00091825	chrX	-	2778	6	FSM	ENSG00000184867.14	ENST00000440675.5	821	6	39	-1996	0	2	multi-exon	FALSE	canonical	3	25	junction_4	104.494975955785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTAATGCTTGAATTTA	NA	False	NA	2	True	AATAAA	-27	NA	101659796	101655278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659407_101659502_101659757
WTC11_00091826	chrX	-	2862	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	-72	-2032	-53	2	multi-exon	FALSE	canonical	3	68	junction_4	87.8831041782207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTAATGCTTGAATTTA	NA	False	NA	2	True	AATAAA	-27	NA	101659903	101655278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
WTC11_00091828	chrX	-	2918	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	-67	-2239	-53	2	multi-exon	FALSE	canonical	3	80	junction_3	84.4952069646557	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTAATGCTTGAATTTA	NA	False	NA	2	True	AATAAA	-27	NA	101659903	101655278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
WTC11_00091831	chrX	-	1866	1	FSM	ENSG00000178146.9	ENST00000328462.7	1570	1	138	-434	138	434	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAACACTATTGGACCA	NA	False	NA	NA	False	NA	NA	NA	101780400	101778534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101778500_101780400
WTC11_00091832	chrX	-	5407	2	FSM	ENSG00000166432.16	ENST00000494068.1	5754	2	717	-370	717	0	multi-exon	FALSE	canonical	3	9	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTATGTAAATGAT	NA	False	NA	1	True	ATTAAA	-18	NA	101889504	101882287	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101884822_101886631
WTC11_00091833	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	13	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	NA	False	NA	-9	True	AATAAA	-15	NA	102155977	102153711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_102154303_102154743_102154811_102155858
WTC11_00091834	chrX	-	640	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	-6	0	6	multi-exon	TRUE	canonical	3	866	junction_1	5	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTGTGGTTGACTCTT	NA	False	NA	-1	True	AATAAA	-26	NA	102516739	102513675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_102514125_102515063_102515181_102516665
WTC11_00091835	chrX	-	799	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	-4	0	4	multi-exon	FALSE	canonical	3	474	junction_2	27.5	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCTTTTTTTGTTAAA	NA	False	NA	-1	True	AATAAA	-22	NA	103064171	103062646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103063280_103063641_103063732_103064095
WTC11_00091836	chrX	-	1188	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	-14	0	14	multi-exon	FALSE	canonical	3	790	junction_2	5.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTTTCATGGGGAAA	NA	False	NA	5	True	AATAAA	-34	NA	103255155	103252980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103254018_103254604_103254678_103255077
WTC11_00091837	chrX	-	1108	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	30	-7	0	7	multi-exon	FALSE	canonical	3	445	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTCAGTCTTTTCAT	NA	False	NA	-2	True	AATAAA	-27	NA	103255155	103252987	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103254018_103255077
WTC11_00091838	chrX	-	1173	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	-135	8	-135	-8	multi-exon	TRUE	canonical	3	38	junction_2	8	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATGTATACAGTATCA	NA	False	NA	-25	True	AATAAA	-44	NA	103276885	103273698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103274591_103275274_103275343_103276672
WTC11_00091839	chrX	-	935	4	NNC	ENSG00000133134.12	novel	843	3	NA	NA	-51	7284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.913116040699	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACACACAACCAGAGT	NA	False	NA	NA	False	NA	NA	NA	103311058	103302061	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103302087_103309346_103309982_103310357_103310434_103310859
WTC11_00091840	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	31	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	NA	False	NA	-1	True	AATAAA	-17	NA	103310990	103309345	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310859
WTC11_00091841	chrX	-	1077	3	FSM	ENSG00000133134.12	ENST00000536889.1	1077	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	189	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTCTCTGCATTC	NA	False	NA	-9	True	AATAAA	-9	NA	103310955	103309353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310582
WTC11_00091842	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	169.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	103311007	103309501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310895
WTC11_00091843	chrX	-	3126	1	FSM	ENSG00000172476.4	ENST00000372633.1	3126	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGAATTTCTATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	103502875	103499749	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103499700_103502900
WTC11_00091844	chrX	-	1824	5	NNC	ENSG00000123562.18	novel	1866	4	NA	NA	0	6899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	765.705883482686	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGCTATTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	103686684	103668596	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103668621_103675497_103677052_103678498_103678601_103685170_103685261_103686630
WTC11_00091845	chrX	-	1866	4	FSM	ENSG00000123562.18	ENST00000441076.7	1866	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	651.022955731124	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	103686699	103675497	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
WTC11_00091846	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	699.718673626924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	NA	False	NA	-2	True	AATAAA	-27	NA	103688064	103675495	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
WTC11_00091847	chrX	-	3124	3	NNC	ENSG00000123562.18	novel	1965	4	NA	NA	2005	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	964	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103683500	103675499	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103677052_103678498_103679926_103683355
WTC11_00091848	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	827.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103686818	103675499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103685170_103685261_103686630
WTC11_00091849	chrX	-	1963	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	2	0	-2	multi-exon	FALSE	canonical	3	229	junction_3	752.713461787123	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAATTTGTAGTGTGC	NA	False	NA	-8	True	AATAAA	-21	NA	103688158	103675501	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
WTC11_00091852	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	737.224991098376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	NA	False	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
WTC11_00091855	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	446.164643252789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103686816	103676978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
WTC11_00091856	chrX	-	2348	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1595	-4356	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	139	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATGACTGGGAGGAAGT	NA	False	NA	-4	True	AATAAA	-20	NA	103767020	103753753	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103755672_103764961_103765155_103766783
WTC11_00091857	chrX	-	826	3	ISM	ENSG00000288597.1	ENST00000674274.1	2186	12	65164	0	1546	0	3prime_fragment	FALSE	canonical	3	65	junction_1	124.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767069	103761191	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_103761539_103764961_103765155_103766783
WTC11_00091858	chrX	-	4313	2	FSM	ENSG00000288597.1	ENST00000674403.1	4080	2	1476	-1709	1476	-6	multi-exon	FALSE	canonical	3	314	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTGGTGAT	NA	False	NA	-9	True	ATTAAA	-16	NA	103767139	103761197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103765155_103766783
WTC11_00091859	chrX	-	830	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1539	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	120.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767076	103761191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_103761536_103764961_103765155_103766783
WTC11_00091860	chrX	-	905	1	FSM	ENSG00000235946.1	ENST00000441761.1	496	1	-410	1	-410	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATCTCAGGAGCGCCCG	NA	False	NA	NA	False	NA	NA	NA	104063447	104062542	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104062500_104063400
WTC11_00091861	chrX	-	2286	3	FSM	ENSG00000269226.7	ENST00000620307.4	2286	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	66.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAGGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	104076194	104063870	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104065985_104074240_104074358_104076139
WTC11_00091862	chrX	-	642	3	FSM	ENSG00000269226.7	ENST00000598087.3	947	3	0	305	0	-305	multi-exon	FALSE	canonical	3	137	junction_2	16	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGTTCATTCTGGTG	NA	False	NA	NA	False	AATAAA	-28	NA	104076212	104072872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104073325_104074240_104074358_104076139
WTC11_00091863	chrX	-	1706	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	-975	0	975	multi-exon	FALSE	canonical	3	28	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACAGAGTGGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	104156988	104129628	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104131224_104156877
WTC11_00091864	chrX	-	4289	17	NNC	ENSG00000133131.15	novel	3798	17	NA	NA	8	499	at_least_one_novel_splicesite	TRUE	non_canonical	2	4	junction_10	5.30293256132868	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTCAAAAGACATTGAA	NA	False	NA	NA	False	NA	NA	NA	107000204	106940238	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_106941633_106941937_106942222_106942514_106943206_106954912_106955089_106956479_106956535_106956935_106957005_106958335_106958465_106962011_106962111_106976583_106976685_106978079_106978200_106980890_106981020_106981344_106981478_106985095_106985243_106985981_106986201_106993229_106993363_106999676_106999750_106999867
WTC11_00091865	chrX	-	828	2	FSM	ENSG00000133131.15	ENST00000478924.1	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTCTTCTCTTATCTT	NA	False	NA	NA	False	NA	NA	NA	106942584	106941463	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_106942222_106942514
WTC11_00091866	chrX	-	7003	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	25.3288574635368	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGAGAGACGGTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	107118822	107061886	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
WTC11_00091867	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	15.8157797433098	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118804	107067137	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
WTC11_00091868	chrX	-	925	5	FSM	ENSG00000089682.17	ENST00000485676.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	30.3067649213835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGAAATCCAGAGAAA	NA	False	NA	NA	False	AATAGA	-11	NA	107116768	107088525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107088840_107115351_107115557_107115861_107116055_107116150_107116245_107116649
WTC11_00091869	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	9.77098880473324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206433	107123471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
WTC11_00091870	chrX	-	876	1	FSM	ENSG00000215007.3	ENST00000399417.3	1194	1	165	153	165	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGAAGGAAGTGGAAGA	NA	False	NA	NA	False	GATAAA	-28	NA	107352678	107351802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107351800_107352700
WTC11_00091872	chrX	-	1797	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	15	0	15	0	multi-exon	FALSE	canonical	3	14	junction_2	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107716530	107713220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107714750_107715898_107715951_107716314
WTC11_00091873	chrX	-	1968	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	59	0	-14	0	multi-exon	FALSE	canonical	3	67	junction_2	27	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107717076	107713220	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107714750_107715898_107715951_107716689
WTC11_00091874	chrX	-	2317	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	-52	4	-52	-1	multi-exon	FALSE	canonical	3	27	junction_2	47	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTGGTGTCTGACTGA	NA	False	NA	NA	False	AATAAA	-23	NA	107775839	107713224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107714750_107715898_107715951_107775099
WTC11_00091876	chrX	-	1478	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	-8	0	8	multi-exon	FALSE	canonical	3	585	junction_2	10.688779163216	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTTCAAATTAGCTA	NA	False	NA	-10	True	AATAAA	-21	NA	108091542	108084198	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
WTC11_00091878	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	227.476372399421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	NA	False	NA	NA	False	TATAAA	-19	NA	108091542	108084829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
WTC11_00091879	chrX	-	3491	2	ISM	ENSG00000197565.17	ENST00000334504.12	6685	45	277117	0	2293	0	intron_retention	FALSE	canonical	3	43	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTCTTTTGATGTT	NA	False	NA	-21	True	AATAAA	-17	NA	108161305	108155613	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_108157261_108159461
WTC11_00091880	chrX	-	1909	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	-20	0	20	multi-exon	FALSE	canonical	1	2	junction_1	13.0213499897497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGTATTGTTT	NA	False	NA	1	True	AATAAA	-39	NA	108438430	108267621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
WTC11_00091881	chrX	-	5545	2	NNC	ENSG00000133124.12	novel	6563	2	NA	NA	10939	4693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGATTAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	108725470	108715252	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_108715280_108719952
WTC11_00091882	chrX	-	6563	2	FSM	ENSG00000133124.12	ENST00000372129.4	6563	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	NA	False	NA	-1	True	AATAAA	-18	NA	108736563	108719945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108722524_108732578
WTC11_00091883	chrX	-	1473	1	FSM	ENSG00000176076.7	ENST00000372101.3	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	NA	False	NA	-3	True	AATAAA	-18	NA	109625172	109623699	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109623700_109625200
WTC11_00091884	chrX	-	6157	14	FSM	ENSG00000068366.21	ENST00000683559.1	6407	14	266	-16	266	5	multi-exon	FALSE	canonical	3	189	junction_9	21.6532654656392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	NA	False	NA	2	True	AATAAA	-23	NA	109684808	109641329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135
WTC11_00091885	chrX	-	4806	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	-204	0	5	multi-exon	FALSE	canonical	3	25	junction_14	56.4009426032102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	NA	False	NA	2	True	AATAAA	-23	NA	109733220	109641329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
WTC11_00091886	chrX	-	4896	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	-5	0	5	multi-exon	FALSE	canonical	3	122	junction_14	37.2304534845691	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	NA	False	NA	2	True	AATAAA	-23	NA	109733257	109641329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
WTC11_00091887	chrX	-	5205	16	FSM	ENSG00000068366.21	ENST00000469796.7	5182	16	-18	-5	0	5	multi-exon	FALSE	canonical	2	5	junction_14	60.9139283470264	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	NA	False	NA	2	True	AATAAA	-23	NA	109733275	109641329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109696143_109696197_109733138
WTC11_00091888	chrX	-	5048	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	-9	-7	-9	5	multi-exon	FALSE	canonical	3	40	junction_14	53.2596991688421	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	NA	False	NA	2	True	AATAAA	-23	NA	109733412	109641329	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
WTC11_00091889	chrX	-	4976	16	FSM	ENSG00000068366.21	ENST00000671846.1	4976	16	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	61.1368592222037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGTTTAGATTTTGTG	NA	False	NA	-18	True	NA	NA	NA	109733269	109641438	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683553_109696143_109696197_109733138
WTC11_00091892	chrX	-	5351	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	-1	0	1	multi-exon	FALSE	canonical	3	68	junction_4	12.0731106182293	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATTTTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-15	NA	110318085	110194184	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
WTC11_00091894	chrX	-	4259	12	FSM	ENSG00000101938.15	ENST00000372042.6	3860	12	-399	0	-397	0	multi-exon	FALSE	canonical	3	27	junction_3	4.63368906813624	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTCTTGTTGCATAA	NA	False	NA	0	True	AATAAA	-22	NA	110796216	110673855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721531_110759660_110759755_110762694_110762808_110792087_110792216_110795743
WTC11_00091895	chrX	-	1658	12	FSM	ENSG00000101938.15	ENST00000444321.2	1658	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	8.3557274858735	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCTCCTCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	110795819	110676056	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721528_110759660_110759755_110762694_110762808_110792087_110792216_110795743
WTC11_00091896	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	5.79451368873082	742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	NA	False	NA	-2	True	AATAAA	-21	NA	111270483	111245098	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
WTC11_00091897	chrX	-	2031	1	FSM	ENSG00000225031.1	ENST00000432307.1	1813	1	-29	-189	-29	189	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATCGCCAATATAGCC	NA	False	NA	NA	False	AATGAA	-45	NA	111621518	111619487	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111619500_111621500
WTC11_00091898	chrX	-	1618	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	-62	3	54	-3	multi-exon	FALSE	canonical	1	1	junction_3	4.54606056566195	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGATGTTTCTGCTAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	112680000	112630650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
WTC11_00091899	chrX	-	678	4	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	10.8423039781937	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCCTTAACGTGGGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	114463181	114399481	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114399704_114400079_114400209_114461790_114461851_114462914
WTC11_00091900	chrX	-	2729	3	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	30	junction_2	129.5	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCCAGGATGATCCAGG	NA	False	NA	NA	False	NA	NA	NA	114472497	114466893	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114467711_114467754_114469506_114472336
WTC11_00091901	chrX	-	5473	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAGCGAAGGGAGATAA	NA	False	NA	NA	False	AAAAAG	-2	NA	114472497	114467024	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114467000_114472500
WTC11_00091902	chrX	-	4787	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	9	-3866	9	3064	multi-exon	FALSE	canonical	3	54	junction_2	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTTCTGCTTTTTCAA	NA	False	NA	-3	True	AATAAA	-20	NA	114606887	114591341	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_114595599_114604483_114604772_114606645
WTC11_00091903	chrX	-	2744	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	9	-1309	9	1309	multi-exon	FALSE	canonical	3	55	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTAAGCATTGCT	NA	False	NA	-12	True	NA	NA	NA	114606887	114593096	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_114595599_114606645
WTC11_00091904	chrX	-	4947	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	3	3	3	-3	multi-exon	TRUE	canonical	3	9	junction_13	4.23408785926792	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGTCTGGTATTTC	NA	False	NA	NA	False	GATAAA	-12	NA	115234093	115110618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
WTC11_00091905	chrX	-	1510	1	FSM	ENSG00000234558.1	ENST00000424316.1	1510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGAGGTGGCCGAGGTT	NA	False	NA	NA	False	AATATA	-45	NA	116108430	116106920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_116106900_116108400
WTC11_00091906	chrX	-	1989	2	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGCTACCTATATTAT	NA	False	NA	NA	False	ATTAAA	-35	NA	116817865	116809598	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116811350_116817627
WTC11_00091907	chrX	-	3867	2	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAATGTAAATAATTT	NA	False	NA	58	True	NA	NA	NA	116817850	116809662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116811350_116815670
WTC11_00091908	chrX	-	3299	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	24	-1	24	0	multi-exon	FALSE	canonical	3	38	junction_3	8.47381587925744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCTGAGACATCCCA	NA	False	NA	-19	True	AATAAA	-15	NA	118116841	117897812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
WTC11_00091909	chrX	-	3346	8	FSM	ENSG00000003096.14	ENST00000540167.5	3396	8	51	-1	-16	0	multi-exon	FALSE	canonical	1	2	junction_7	22.2242742816709	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCTGAGACATCCCA	NA	False	NA	-19	True	AATAAA	-15	NA	118116814	117897812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118028423_118028498_118116507
WTC11_00091910	chrX	-	3560	1	FSM	ENSG00000224281.5	ENST00000395539.2	3062	1	-565	67	-532	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATACTATTCTTGGTTA	NA	False	NA	-75	True	AAAAAG	-41	NA	119469660	119466100	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119466100_119469700
WTC11_00091911	chrX	-	2298	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	4	-1	3	1	multi-exon	FALSE	canonical	3	69	junction_3	5.66911711723165	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTAACCTTCTTGTAT	NA	False	NA	-8	True	ATTAAA	-18	NA	119565405	119538147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
WTC11_00091912	chrX	-	498	3	FSM	ENSG00000018610.15	ENST00000469448.1	576	3	78	0	78	0	multi-exon	FALSE	canonical	3	72	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTAACTTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	119542689	119539569	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119539790_119541327_119541421_119542504
WTC11_00091913	chrX	-	5563	2	FSM	ENSG00000186416.18	ENST00000649446.1	3741	2	-1822	0	-1822	0	multi-exon	FALSE	canonical	3	75	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCGTGCTCATTTCCG	NA	False	NA	2	True	AATAAA	-23	NA	119594972	119588336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119591310_119592382
WTC11_00091914	chrX	-	3817	3	FSM	ENSG00000186416.18	ENST00000304449.8	3817	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	11.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCGTGCTCATTTCCG	NA	False	NA	2	True	AATAAA	-23	NA	119606443	119588336	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119591310_119592382_119592514_119605730
WTC11_00091915	chrX	-	1155	3	NNC	ENSG00000125354.24	novel	2609	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	126	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTGATCTGATCTT	NA	False	NA	-4	True	AATAAA	-19	NA	119633486	119615723	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119616561_119629317_119629509_119633359
WTC11_00091916	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	84.1917271089045	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	119693370	119616711	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
WTC11_00091917	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	46.6801885171857	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
WTC11_00091918	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	81.7720408615724	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
WTC11_00091919	chrX	-	3413	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	-26	-694	-26	0	multi-exon	FALSE	canonical	3	38	junction_1	79.6596153705731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693396	119616944	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
WTC11_00091921	chrX	-	1917	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	-2	0	0	multi-exon	FALSE	canonical	3	11013	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	NA	False	NA	-9	True	AATAAA	-23	NA	119791595	119786503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119786733_119789907
WTC11_00091922	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	9679	junction_2	667	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	NA	False	NA	-9	True	AATAAA	-23	NA	119791630	119786503	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119786733_119789907_119790012_119791573
WTC11_00091923	chrX	-	2225	11	NNC	ENSG00000125351.13	novel	2335	10	NA	NA	0	3046	at_least_one_novel_splicesite	FALSE	non_canonical	2	8	junction_1	78.4513224872596	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCTAAAATCAAAAGCTG	NA	False	NA	-14	True	AGTAAA	-5	NA	119852998	119830975	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119831759_119834918_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
WTC11_00091924	chrX	-	3297	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	35	-997	0	993	multi-exon	FALSE	canonical	3	206	junction_5	30.0185128064518	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTAGCTAGTTCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	119852963	119833028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
WTC11_00091925	chrX	-	3180	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	-35	-802	0	802	multi-exon	FALSE	canonical	3	47	junction_3	84.8693702109306	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCAGACCTTGGCTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	119852998	119833219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
WTC11_00091926	chrX	-	1430	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	-222	51	-222	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTTCCTTTGTA	NA	False	NA	1	True	AATAAA	-25	NA	119871955	119870525	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119870500_119872000
WTC11_00091927	chrX	-	5942	9	FSM	ENSG00000101882.10	ENST00000371410.5	5942	9	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_7	28.7097544399112	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGTATTGTATTTTTA	NA	False	NA	-5	True	AATAAA	-16	NA	119943751	119920671	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
WTC11_00091928	chrX	-	2386	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	44	-6	14	6	multi-exon	FALSE	canonical	3	10	junction_1	6	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCACTGACTTTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	120245229	120236451	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120238243_120240226_120240356_120244763
WTC11_00091929	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	81.2757651455832	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	120469296	120426147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
WTC11_00091930	chrX	-	1069	7	FSM	ENSG00000005893.16	ENST00000486593.5	1069	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	214.867918085093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTTCTTAAAATTGATA	NA	False	NA	-108	True	AATACA	-43	NA	120449068	120431247	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120431463_120439075_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969
WTC11_00091931	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	102.232272301852	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	NA	False	NA	0	True	AATAAA	-24	NA	120469306	120436493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
WTC11_00091932	chrX	-	5915	20	FSM	ENSG00000158290.19	ENST00000371322.11	5915	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	124	junction_8	19.7652427241509	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATAATTATGCTTTGT	NA	False	NA	-10	True	ATTAAA	-26	NA	120560962	120523857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
WTC11_00091933	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	23	junction_19	35.8554345722605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120559915	120524611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
WTC11_00091935	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	52	junction_20	30.010164944565	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120561453	120524611	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
WTC11_00091939	chrX	-	1825	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	-103	-86	-103	86	multi-exon	FALSE	canonical	3	219	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTGTAACTGTCTG	NA	False	NA	67	True	NA	NA	NA	120630157	120625587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120627172_120629916
WTC11_00091940	chrX	-	1006	1	FSM	ENSG00000237828.1	ENST00000442248.1	1197	1	249	-58	249	58	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCAGGCTCTGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	120869558	120868552	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120868600_120869600
WTC11_00091941	chrX	-	1833	1	FSM	ENSG00000234176.1	ENST00000425843.1	1833	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAGGCATGCCAGGAG	NA	False	NA	NA	False	AAGAAA	-36	NA	121205014	121203181	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_121203200_121205000
WTC11_00091942	chrX	-	5606	39	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	55.9499244353496	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTGTATATTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	123733056	123600560	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123601339_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
WTC11_00091943	chrX	-	573	4	FSM	ENSG00000125676.20	ENST00000455053.5	573	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	101.654097583696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTAGTTCATTCTTCTT	NA	False	NA	NA	False	AATGAA	-11	NA	123613554	123603448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_123603749_123610917_123610958_123611439_123611517_123613398
WTC11_00091948	chrX	-	509	1	FSM	ENSG00000232599.1	ENST00000422498.1	534	1	26	-1	26	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGCGTTTCTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	125204312	125203803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_125203800_125204300
WTC11_00091949	chrX	-	8229	2	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATTGTGTAATACTGA	NA	False	NA	-19	True	ATTAAA	-12	NA	125394209	125384920	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125392902_125393961
WTC11_00091951	chrX	-	788	3	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTGAAACATTGTGTAA	NA	False	NA	-25	True	ATTAAA	-6	NA	125394166	125384926	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125385912_125393961
WTC11_00091952	chrX	-	2791	1	FSM	ENSG00000198354.7	ENST00000360028.4	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGCAGACTTAAGTT	NA	False	NA	2	True	AATAAA	-26	NA	126166289	126163498	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126163500_126166300
WTC11_00091953	chrX	-	4125	25	NIC	ENSG00000102038.16	novel	3989	25	NA	NA	0	100	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	116.144658065803	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGATCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	129523490	129446400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447234_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091954	chrX	-	4136	24	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	0	100	combination_of_known_splicesites	FALSE	canonical	3	107	junction_1	126.227058594269	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGATCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	129523500	129446400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091955	chrX	-	4291	23	FSM	ENSG00000102038.16	ENST00000617310.4	4291	23	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	141.530689076303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	129523464	129446500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447302_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091956	chrX	-	3996	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	-5	-43	0	38	multi-exon	FALSE	canonical	3	132	junction_12	95.2852646714909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGAATTGTATTGCTT	NA	False	NA	NA	False	AAGAAA	-44	NA	129523490	129446462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091957	chrX	-	4006	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	26	-43	0	38	multi-exon	FALSE	canonical	3	350	junction_13	67.3621921448193	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGAATTGTATTGCTT	NA	False	NA	NA	False	AAGAAA	-44	NA	129523464	129446462	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091958	chrX	-	4103	25	FSM	ENSG00000102038.16	ENST00000371122.8	4099	25	0	-4	0	0	multi-exon	FALSE	canonical	3	20	junction_1	119.9585576587	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	129523500	129446500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447302_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091959	chrX	-	4136	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	0	100	combination_of_known_splicesites	FALSE	canonical	3	107	junction_1	105.859568598634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGATCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	129523464	129446400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00091961	chrX	-	3224	3	FSM	ENSG00000171388.12	ENST00000429967.3	3224	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	129654956	129645258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129647918_129648620_129648793_129654563
WTC11_00091962	chrX	-	4579	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	1	-9	1	9	multi-exon	FALSE	canonical	0	0	junction_4	49.944869606397	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTACTTGTGCCTA	NA	False	NA	-9	True	AATACA	-30	NA	129843885	129803278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
WTC11_00091963	chrX	-	4690	10	FSM	ENSG00000188706.13	ENST00000371064.7	2473	10	-167	-2050	-167	9	multi-exon	FALSE	canonical	0	0	junction_4	52.2170210175822	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTACTTGTGCCTA	NA	False	NA	-9	True	AATACA	-30	NA	129843627	129803278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258
WTC11_00091965	chrX	-	2222	16	FSM	ENSG00000156709.15	ENST00000287295.8	2222	16	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_7	44.7613920943286	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	130165841	130129361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
WTC11_00091968	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	10.5293534440922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	NA	False	NA	-6	True	AATAAA	-20	NA	130268899	130202706	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
WTC11_00091970	chrX	-	5173	16	FSM	ENSG00000165675.19	ENST00000338144.8	5215	16	0	42	0	-42	multi-exon	FALSE	canonical	2	6	junction_13	15.551205741035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCATATAAGGCAGAATA	NA	False	NA	NA	False	NA	NA	NA	130903209	130622366	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130709242_130709332_130783546_130783691_130901683_130901732_130903048
WTC11_00091971	chrX	-	5112	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	14	0	-14	multi-exon	FALSE	canonical	3	40	junction_4	6.59506618307835	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTGAAAAGATAGCATAA	NA	False	NA	NA	False	AATAAA	-7	NA	130903209	130622338	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
WTC11_00091972	chrX	-	4462	20	FSM	ENSG00000147255.19	ENST00000361420.8	4461	20	0	-1	0	1	multi-exon	TRUE	canonical	3	46	junction_9	32.9469480383472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTGGTCTTCTATT	NA	False	NA	-1	True	AATAAA	-30	NA	131289306	131273504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
WTC11_00091975	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	12.3161479367536	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131289286	131284165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
WTC11_00091976	chrX	-	2126	8	NIC	ENSG00000147255.19	novel	5413	27	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	64.2733321408638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131578721	131284165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213_131289276_131389016_131389149_131399573_131399705_131578667
WTC11_00091977	chrX	-	1302	10	FSM	ENSG00000213468.7	ENST00000662867.1	1302	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	21.1280633690927	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGGCTTTTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	131785262	131689737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131689841_131689945_131690016_131692437_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156
WTC11_00091978	chrX	-	4485	11	FSM	ENSG00000213468.7	ENST00000663405.1	4468	11	0	-17	0	0	multi-exon	FALSE	canonical	1	6	junction_1	57.6260357824482	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGGCTTTTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	131830637	131689737	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131794467_131825221_131825366_131830291
WTC11_00091980	chrX	-	4306	13	NIC	ENSG00000213468.7	novel	2478	13	NA	NA	0	6727	intron_retention	FALSE	canonical	3	14	junction_7	53.9250379899933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTACTGGTGACATT	NA	False	NA	NA	False	NA	NA	NA	131830585	131742529	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131743249_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131796332_131804971_131805038_131825221_131825366_131830291
WTC11_00091982	chrX	-	1233	3	FSM	ENSG00000213468.7	ENST00000668308.1	1240	3	0	7	0	-7	multi-exon	FALSE	canonical	3	36	junction_1	91	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGATGTGCGCTGTCT	NA	False	NA	-19	True	NA	NA	NA	131830673	131793759	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131794467_131825221_131825366_131830291
WTC11_00091984	chrX	-	2250	1	FSM	ENSG00000228089.1	ENST00000435914.1	430	1	115	-1935	115	1935	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCATTCCAGTTTGA	NA	False	NA	NA	False	AATACA	-18	NA	131803626	131801376	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131801400_131803600
WTC11_00091986	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131825366_131830291
WTC11_00091988	chrX	-	3897	4	FSM	ENSG00000123728.10	ENST00000342983.6	3896	4	0	-1	0	0	multi-exon	FALSE	canonical	3	104	junction_3	18.0554700852678	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTCTTTAATTATTT	NA	False	NA	-12	True	AATAAA	-22	NA	132218124	132203023	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_132205588_132214133_132214447_132216995_132217807_132217915
WTC11_00091989	chrX	-	4010	3	ISM	ENSG00000171004.19	ENST00000370836.6	4441	4	2814	-6	48	5	3prime_fragment	FALSE	canonical	3	18	junction_2	11	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATCTCATAATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	132958581	132626009	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_132629094_132956807_132957327_132958174
WTC11_00091990	chrX	-	258	1	FSM	ENSG00000227064.1	ENST00000428456.1	297	1	220	-181	220	181	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGCTTCTGGGATG	NA	False	NA	NA	False	AAGAAA	-9	NA	132907355	132907097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_132907100_132907400
WTC11_00091991	chrX	-	4054	10	NNC	ENSG00000076716.9	novel	4959	9	NA	NA	0	49942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	230.739765766919	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCAAAAAATCTCATAATG	NA	False	NA	NA	False	NA	NA	NA	133415489	133250160	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_133250189_133301035_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
WTC11_00091992	chrX	-	4985	10	NNC	ENSG00000076716.9	novel	4959	9	NA	NA	0	49942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	230.739765766919	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCAAAAAATCTCATAATG	NA	False	NA	NA	False	NA	NA	NA	133415489	133250160	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_133250189_133300104_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
WTC11_00091993	chrX	-	5157	9	FSM	ENSG00000076716.9	ENST00000370828.4	4959	9	0	-198	0	198	multi-exon	FALSE	canonical	3	537	junction_4	96.480244091731	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGCTAAGCCAAATGTA	NA	False	NA	NA	False	NA	NA	NA	133415489	133299904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
WTC11_00091994	chrX	-	2290	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	-23	0	23	multi-exon	FALSE	canonical	3	289	junction_6	35.3466795484674	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTCTATGGTGACTGC	NA	False	NA	-5	True	AATAAA	-39	NA	133985594	133535721	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
WTC11_00091995	chrX	-	1042	1	FSM	ENSG00000284107.1	ENST00000385077.3	96	1	-427	-519	-427	519	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCTTTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	134170193	134169151	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134169200_134170200
WTC11_00091996	chrX	-	4385	9	FSM	ENSG00000156504.17	ENST00000370790.5	4246	9	-131	-8	-33	8	multi-exon	FALSE	canonical	3	69	junction_3	28.2817852159301	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTCTGTCCTTTGTT	NA	False	NA	-9	True	AATAAA	-33	NA	134797265	134769557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
WTC11_00091997	chrX	-	4385	10	FSM	ENSG00000156504.17	ENST00000343004.10	4377	10	0	-8	0	8	multi-exon	FALSE	canonical	3	53	junction_3	42.0214524872214	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTCTGTCCTTTGTT	NA	False	NA	-9	True	AATAAA	-33	NA	134797205	134769557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
WTC11_00092003	chrX	-	2370	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	-196	-1401	-166	18	multi-exon	FALSE	canonical	3	63	junction_1	43.6828055417689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGACTTATCTT	NA	False	NA	7	True	AATAAA	-36	NA	134915423	134887613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
WTC11_00092004	chrX	-	2366	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	-18	0	18	multi-exon	FALSE	canonical	3	94	junction_1	33.956442687655	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGACTTATCTT	NA	False	NA	7	True	AATAAA	-36	NA	134915257	134887613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
WTC11_00092005	chrX	-	924	5	FSM	ENSG00000101928.13	ENST00000491609.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	51.0954988232819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAGGAAATTATTTGA	NA	False	NA	NA	False	NA	NA	NA	134915231	134888953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899279_134899535_134915181
WTC11_00092007	chrX	-	2046	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	12	-28	12	28	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTCATAGATATACCAA	NA	False	NA	14	True	NA	NA	NA	135022530	135020484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135020500_135022500
WTC11_00092008	chrX	-	1246	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	-42	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052177	135050931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135050900_135052200
WTC11_00092009	chrX	-	825	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	-8	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052196	135050931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135051477_135051916
WTC11_00092010	chrX	-	659	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	2	-125	2	-1	multi-exon	FALSE	canonical	3	311	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGTCTCAATGAATATG	NA	False	NA	NA	False	AATAAA	-23	NA	135052139	135050932	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135051369_135051916
WTC11_00092011	chrX	-	2817	2	FSM	ENSG00000196972.9	ENST00000433425.4	2817	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTTCCGTGTCTG	NA	False	NA	NA	False	AATACA	-13	NA	135098712	135094984	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135097122_135098032
WTC11_00092012	chrX	-	5607	7	FSM	ENSG00000186376.15	ENST00000370766.8	5611	7	0	4	0	-3	multi-exon	FALSE	canonical	2	12	junction_3	7.50555349946513	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTCAGAAATGGCCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	135344109	135285794	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135341767
WTC11_00092013	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	2.05480466765633	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	135973988	135960587	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
WTC11_00092014	chrX	-	235	1	FSM	ENSG00000231513.3	ENST00000468625.1	514	1	10	269	10	-269	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGCTTAAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	136098338	136098103	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136098100_136098300
WTC11_00092015	chrX	-	668	4	FSM	ENSG00000129680.16	ENST00000471510.1	671	4	0	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_1	50.4468917663803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGGGTTTTTTCATTA	NA	False	NA	NA	False	AATAAA	-12	NA	136220813	136216816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136217259_136219397_136219496_136219592_136219672_136220764
WTC11_00092016	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	16.1563540991703	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	136251400	136216813	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
WTC11_00092017	chrX	-	4818	21	FSM	ENSG00000129675.16	ENST00000370620.5	4764	21	-57	3	-57	0	multi-exon	FALSE	canonical	3	18	junction_20	2.76541136180497	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTTTTGCTTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	136767400	136665549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136668170_136669481_136669537_136672019_136672120_136675006_136675097_136676623_136676718_136677935_136677957_136679534_136679661_136680730_136680877_136681889_136681969_136682757_136682845_136685676_136685824_136687931_136687992_136690609_136690749_136706907_136707031_136708674_136708771_136713275_136713371_136732101_136732173_136743584_136743787_136745222_136745348_136747507_136747593_136767143
WTC11_00092018	chrX	-	3563	12	NNC	ENSG00000147274.14	novel	2012	9	NA	NA	0	10405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1441.62209488576	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCCTCACAAGAACCTT	NA	False	NA	NA	False	AATAAA	-33	NA	136880722	136858781	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_136858817_136869191_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
WTC11_00092020	chrX	-	2041	3	FSM	ENSG00000147274.14	ENST00000496459.2	2041	3	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	163.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	NA	False	NA	-14	True	AATAAA	-15	NA	136873982	136869191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136870418_136872267_136872346_136873245
WTC11_00092021	chrX	-	4887	8	FSM	ENSG00000147274.14	ENST00000568578.5	4887	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	1528.77090821219	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	NA	False	NA	-16	True	AATAAA	-13	NA	136880722	136869193	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136870418_136872267_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
WTC11_00092023	chrX	-	1852	8	FSM	ENSG00000147274.14	ENST00000464781.5	1852	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	1350.67907334928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTGCTCTTACTG	NA	False	NA	-7	True	AATAAA	-31	NA	136880725	136873448	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
WTC11_00092024	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_8	205.541358368577	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	NA	False	NA	-19	True	AATAAA	-19	NA	136880725	136873460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
WTC11_00092028	chrX	-	238	2	FSM	ENSG00000224765.2	ENST00000442841.1	586	2	0	348	0	-348	multi-exon	FALSE	canonical	2	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATATTTGTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	137564387	137561016	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_137561198_137564330
WTC11_00092029	chrX	-	19572	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	3	0	-3	multi-exon	FALSE	canonical	3	345	junction_4	22.0340645365307	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTGTGTGATCATT	NA	False	NA	-1	True	AATAAA	-22	NA	138711717	138614729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
WTC11_00092032	chrX	-	1993	13	FSM	ENSG00000101977.21	ENST00000437564.5	1988	13	0	-5	0	4	multi-exon	FALSE	canonical	0	0	junction_12	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCTGCCTTTTTCG	NA	False	NA	NA	False	AATAAA	-23	NA	139605779	139581765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_139582504_139585065_139585179_139586377_139586488_139587715_139587789_139588359_139588439_139589834_139589928_139596548_139596771_139597459_139597586_139598405_139598499_139602405_139602499_139604680_139604751_139604868_139604985_139605712
WTC11_00092033	chrX	-	7022	30	FSM	ENSG00000101974.15	ENST00000682941.1	7019	30	0	-3	0	1	multi-exon	FALSE	canonical	3	112	junction_29	18.2578961791718	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCCTCTTTTTTTTGGG	NA	False	NA	-20	True	AATAAA	-24	NA	139933053	139726344	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_139728963_139731650_139731756_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
WTC11_00092034	chrX	-	2087	1	FSM	ENSG00000134595.9	ENST00000370536.5	2085	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGTCCTGATAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	140505069	140502982	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_140503000_140505100
WTC11_00092035	chrX	-	1408	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	7	11047	intron_retention	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGAAATAAATAGTCTT	NA	False	NA	NA	False	NA	NA	NA	141177122	141162187	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_141162222_141175748
WTC11_00092036	chrX	-	1426	1	FSM	ENSG00000182195.9	ENST00000370526.5	3895	1	-45	2514	-45	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	141177174	141175748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_141175700_141177200
WTC11_00092037	chrX	-	988	1	FSM	ENSG00000231686.1	ENST00000445173.1	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGCATGACACCGCGGGA	NA	False	NA	NA	False	NA	NA	NA	146620584	146619596	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_146619600_146620600
WTC11_00092038	chrX	-	7529	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	51	0	-51	multi-exon	TRUE	canonical	3	60	junction_1	22.0535569693417	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGCAGCATGAGTT	NA	False	NA	NA	False	AAAACA	-14	NA	149505306	149477038	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
WTC11_00092039	chrX	-	1394	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	5	0	5	0	multi-exon	FALSE	canonical	3	24	junction_1	32.7014946921703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	NA	False	NA	-2	True	AATAAA	-26	NA	149505342	149487130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
WTC11_00092042	chrX	-	3742	3	FSM	ENSG00000269556.9	ENST00000616857.4	3742	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149602220	149596555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302
WTC11_00092043	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	25.9020591202064	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631792	149596555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
WTC11_00092044	chrX	-	436	3	FSM	ENSG00000269556.9	ENST00000502618.5	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	73	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGCGTTCCACGGGAA	NA	False	NA	NA	False	NA	NA	NA	149611463	149600304	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149600480_149603986_149604071_149611286
WTC11_00092045	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.6487105081727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	149631698	149603708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
WTC11_00092046	chrX	-	3136	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	0	1608	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.8653201316856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTGGCATTCAGCCAAGA	NA	False	NA	NA	False	AAGAAA	-18	NA	149938472	149927918	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
WTC11_00092047	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	66.9883571973518	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938435	149929526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
WTC11_00092048	chrX	-	1717	7	NIC	ENSG00000197021.9	novel	1129	6	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	94.2262348464234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTAGAGTCTCGGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	149938472	149929534	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938141
WTC11_00092049	chrX	-	1699	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	-13	-370	0	366	multi-exon	FALSE	canonical	3	27	junction_3	81.567073626556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	149938472	149931830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
WTC11_00092050	chrX	-	1525	6	NIC	ENSG00000197021.9	novel	1129	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	100.562418427562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938435	149932196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938141
WTC11_00092051	chrX	-	1333	5	FSM	ENSG00000197021.9	ENST00000370406.8	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	41.4397152499869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938491	149932196	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
WTC11_00092055	chrX	-	5601	3	FSM	ENSG00000102287.19	ENST00000486255.1	6176	3	574	1	574	-1	multi-exon	FALSE	canonical	3	15	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAAGGTGTGGCTGGTT	NA	False	NA	-13	True	AATAAA	-14	NA	151959149	151953125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_151955085_151955367_151955568_151955707
WTC11_00092057	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	19.4809181723939	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	NA	False	NA	0	True	ATTAAA	-17	NA	152451315	152166233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
WTC11_00092058	chrX	-	880	2	FSM	ENSG00000268902.4	ENST00000640702.1	793	2	-84	-3	-84	0	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152709349	152708260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152708641_152708849
WTC11_00092059	chrX	-	847	2	FSM	ENSG00000268902.4	ENST00000638741.1	844	2	0	-3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152709265	152708260	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152708641_152708798
WTC11_00092060	chrX	-	721	5	NNC	ENSG00000268902.4	novel	789	5	NA	NA	36	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.270498199194	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAATGATGTGTGTGTC	NA	False	NA	NA	False	AATAAA	-11	NA	152714513	152708270	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_152708641_152708849_152709001_152709460_152709576_152713255_152713316_152714488
WTC11_00092061	chrX	-	637	4	FSM	ENSG00000198930.13	ENST00000452779.3	645	4	5	3	5	-3	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	152733716	152727486	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733667
WTC11_00092062	chrX	-	2130	5	ISM	ENSG00000268606.6	ENST00000623438.3	2009	6	42	1	0	-1	intron_retention	FALSE	canonical	3	38	junction_4	59.888959750525	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753842	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753541
WTC11_00092063	chrX	-	2006	4	FSM	ENSG00000268606.6	ENST00000611557.4	2024	4	16	2	10	-1	multi-exon	FALSE	canonical	3	11	junction_3	78.4984076271615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753868	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753612
WTC11_00092064	chrX	-	1884	5	FSM	ENSG00000268606.6	ENST00000684311.1	1886	5	0	2	0	-1	multi-exon	FALSE	canonical	3	31	junction_4	62.0664965984065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753842	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753787
WTC11_00092065	chrX	-	1841	4	FSM	ENSG00000268606.6	ENST00000595583.5	1830	4	0	-11	0	-1	multi-exon	FALSE	canonical	3	50	junction_3	62.6578007912822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753878	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753787
WTC11_00092066	chrX	-	1730	3	FSM	ENSG00000268606.6	ENST00000611674.4	1728	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	20	junction_2	91.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753887	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152751508_152751575_152753787
WTC11_00092067	chrX	-	440	1	ISM	ENSG00000197172.11	ENST00000329342.10	1682	3	2627	487	2615	321	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGTGACGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	152767062	152766622	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_152766600_152767100
WTC11_00092068	chrX	-	1617	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	-204	0	204	multi-exon	FALSE	canonical	3	336	junction_2	26.9478663348325	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTTTGTTCACATGGA	NA	False	NA	NA	False	AATAGA	-19	NA	152830757	152826789	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
WTC11_00092069	chrX	-	1710	2	Genic_Genomic	ENSG00000268883.2	novel	1200	1	NA	NA	-724	114	multi-exon	FALSE	canonical	3	36	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCAGGGCCGGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	153077692	153075654	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_153077097_153077424
WTC11_00092070	chrX	-	1200	1	FSM	ENSG00000268883.2	ENST00000538162.3	1200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGCTGGGGAGGCAGC	NA	False	NA	NA	False	GGGGCT	-32	NA	153076968	153075768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153075800_153077000
WTC11_00092071	chrX	-	1322	11	NNC	ENSG00000213397.12	novel	1306	10	NA	NA	0	17772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.498300275102	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACACAGCTAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	153470565	153429895	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153429926_153447670_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
WTC11_00092072	chrX	-	1510	12	NNC	ENSG00000213397.12	novel	1306	10	NA	NA	0	17772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.173965892834	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACACAGCTAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	153470576	153429895	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153429926_153447670_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
WTC11_00092073	chrX	-	493	4	FSM	ENSG00000213397.12	ENST00000460898.5	491	4	0	-2	0	0	multi-exon	FALSE	canonical	3	70	junction_3	250.834606862769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153456293	153447667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153447910_153454393_153454509_153455541_153455649_153456264
WTC11_00092075	chrX	-	1929	5	FSM	ENSG00000213397.12	ENST00000484394.5	1927	5	0	-2	0	0	multi-exon	FALSE	canonical	3	545	junction_4	42.4109360896456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153457191	153447667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153447910_153454393_153455767_153456264_153456365_153456492_153456652_153457136
WTC11_00092076	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	40.964603811487	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153470576	153447667	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
WTC11_00092082	chrX	-	1175	5	FSM	ENSG00000262919.8	ENST00000440428.5	1164	5	0	-11	0	4	multi-exon	FALSE	canonical	3	88	junction_1	47.0106370941726	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTTGGCTTTGCTCTGC	NA	False	NA	-1	True	AATAAA	-21	NA	153599117	153587920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598961
WTC11_00092083	chrX	-	1302	5	FSM	ENSG00000262919.8	ENST00000621629.4	1220	5	-71	-11	-49	4	multi-exon	FALSE	canonical	0	0	junction_4	79.1245063175752	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTTGGCTTTGCTCTGC	NA	False	NA	-1	True	AATAAA	-21	NA	153599188	153587920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598965
WTC11_00092084	chrX	-	1257	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	-4	0	4	multi-exon	FALSE	canonical	3	127	junction_1	31.2119768678628	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTTGGCTTTGCTCTGC	NA	False	NA	-1	True	AATAAA	-21	NA	153599139	153587920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
WTC11_00092085	chrX	-	1138	5	NNC	ENSG00000262919.8	novel	1164	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	81.161490252459	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGGACCCTTGGCTTTG	NA	False	NA	-7	True	AATAAA	-15	NA	153599116	153587926	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153588395_153592505_153592704_153594546_153594680_153596003_153596188_153598961
WTC11_00092087	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.96745682049444	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153673813	153669732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
WTC11_00092088	chrX	-	868	4	FSM	ENSG00000130822.16	ENST00000465303.5	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	9.84321537348893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGTGGGTGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	153673804	153671559	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153672201_153672565_153672698_153673008_153673079_153673779
WTC11_00092089	chrX	-	1789	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	981.915100864694	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724066	153700491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
WTC11_00092090	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	183.439697036873	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724387	153700491	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
WTC11_00092091	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	999.452829894274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	NA	False	NA	-9	True	AATAAA	-15	NA	153724388	153700499	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
WTC11_00092096	chrX	-	592	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	-19	0	19	multi-exon	FALSE	canonical	3	2816	junction_3	132.476412994918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGCCACATAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	153724396	153715397	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
WTC11_00092098	chrX	-	1308	12	NIC	ENSG00000067829.20	novel	1335	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	102.687361514823	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	NA	False	NA	-33	True	AATAAA	-16	NA	153794359	153785766	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790809_153790852_153794245
WTC11_00092099	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_12	27.0630693422276	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	NA	False	NA	-34	True	AATAAA	-15	NA	153794375	153785767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
WTC11_00092100	chrX	-	1663	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	-1	0	0	multi-exon	TRUE	canonical	3	312	junction_10	20.2901453912977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	NA	False	NA	-32	True	AATAAA	-17	NA	153794381	153785765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
WTC11_00092101	chrX	-	1709	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	3	0	3	0	multi-exon	FALSE	canonical	3	312	junction_11	24.9670857710872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	NA	False	NA	-32	True	AATAAA	-17	NA	153794509	153785765	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
WTC11_00092104	chrX	-	3689	8	FSM	ENSG00000067840.13	ENST00000164640.8	3689	8	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_6	17.8702808812707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	NA	False	NA	-5	True	AATAAA	-27	NA	153830490	153802165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808359_153808596_153830238
WTC11_00092105	chrX	-	3761	8	FSM	ENSG00000067840.13	ENST00000393758.7	3761	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	11.0638222719504	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	NA	False	NA	-5	True	AATAAA	-27	NA	153830544	153802165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830238
WTC11_00092107	chrX	-	5009	26	FSM	ENSG00000198910.14	ENST00000361981.7	5004	26	0	-5	0	5	multi-exon	FALSE	canonical	3	98	junction_17	16.5130736085079	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTTCGCGGAACA	NA	False	NA	2	True	AATAAA	-21	NA	153875944	153861508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760
WTC11_00092108	chrX	-	5099	27	FSM	ENSG00000198910.14	ENST00000370055.5	4655	27	0	-444	0	5	multi-exon	FALSE	canonical	3	98	junction_17	16.4922879592304	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTTCGCGGAACA	NA	False	NA	2	True	AATAAA	-21	NA	153886154	153861508	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760_153875945_153886064
WTC11_00092109	chrX	-	691	3	FSM	ENSG00000198910.14	ENST00000370058.7	692	3	1	0	1	0	multi-exon	FALSE	canonical	2	8	junction_2	71	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTTGCCAGCCCATT	NA	False	NA	NA	False	NA	NA	NA	153864477	153862432	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153862895_153863476_153863550_153864321
WTC11_00092114	chrX	-	3254	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	18.7371119727498	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	NA	False	NA	-10	True	CATAAA	-20	NA	153926264	153907377	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
WTC11_00092115	chrX	-	864	3	FSM	ENSG00000089820.16	ENST00000466928.5	840	3	0	-24	0	0	multi-exon	FALSE	canonical	3	162	junction_2	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGGCGATTCATAAAGA	NA	False	NA	-47	True	NA	NA	NA	153909658	153907414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442
WTC11_00092116	chrX	-	1752	10	FSM	ENSG00000089820.16	ENST00000494397.5	1752	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_9	21.4913132034754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGGCGATTCATAAAGA	NA	False	NA	-47	True	NA	NA	NA	153912737	153907414	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699
WTC11_00092117	chrX	-	798	6	FSM	ENSG00000089820.16	ENST00000467421.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	8.96660470858396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGACTGCAGGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	153910871	153909507	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699
WTC11_00092120	chrX	-	1777	7	FSM	ENSG00000102030.16	ENST00000460996.5	908	7	85	-954	85	103	multi-exon	FALSE	canonical	3	508	junction_3	44.6557822559284	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTGCGGTGGCTCATG	NA	False	NA	99	True	AATACA	-14	NA	153934700	153929121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376
WTC11_00092121	chrX	-	1675	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	31	-103	0	103	multi-exon	FALSE	canonical	3	508	junction_3	43.4111807285277	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTGCGGTGGCTCATG	NA	False	NA	99	True	AATACA	-14	NA	153935006	153929121	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
WTC11_00092122	chrX	-	847	7	FSM	ENSG00000102030.16	ENST00000370009.5	837	7	0	-10	0	0	multi-exon	FALSE	canonical	2	3	junction_2	219.155766522353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGCGCGCACATTTA	NA	False	NA	-4	True	AATAAA	-30	NA	153935015	153929913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
WTC11_00092123	chrX	-	1757	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	9	-686	0	-15	multi-exon	FALSE	canonical	3	515	junction_2	39.7425744287184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTTTACAGTAGGTTT	NA	False	NA	-19	True	NA	NA	NA	153935006	153929239	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
WTC11_00092128	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.40734500748016	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	NA	False	NA	0	True	AATAAA	-17	NA	153944643	153935268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
WTC11_00092131	chrX	-	8881	26	FSM	ENSG00000172534.14	ENST00000310441.12	8876	26	0	-5	0	5	multi-exon	FALSE	canonical	3	257	junction_22	92.7902236229658	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCTCACTGTGTCCCG	NA	False	NA	1	True	ATTAAA	-24	NA	153971818	153947551	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
WTC11_00092132	chrX	-	9658	26	NIC	ENSG00000172534.14	novel	8876	26	NA	NA	-645	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	108.97522654255	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCTCACTGTGTCCCG	NA	False	NA	1	True	ATTAAA	-24	NA	153972463	153947551	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153953091_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
WTC11_00092134	chrX	-	3581	14	FSM	ENSG00000184216.14	ENST00000369980.8	3581	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	21.4707727583391	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	154019902	154010506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
WTC11_00092141	chrX	-	10400	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	-24	-33	-4	33	multi-exon	FALSE	canonical	3	75	junction_2	33	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCTCCAGCTCACATGA	NA	False	NA	30	True	NA	NA	NA	154097741	154021539	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031451_154032206_154032558_154097603
WTC11_00092142	chrX	-	10555	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	-88	0	88	multi-exon	FALSE	canonical	3	87	junction_3	23.4568161143456	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGGACACAGGTAGCT	NA	False	NA	85	True	NA	NA	NA	154097717	154021484	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
WTC11_00092143	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.0081514516721	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	154097737	154030238	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
WTC11_00092148	chrX	-	8241	47	FSM	ENSG00000196924.19	ENST00000369856.8	8240	47	0	-1	0	0	multi-exon	FALSE	canonical	3	86	junction_19	578.278585867872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	154371222	154348528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
WTC11_00092149	chrX	-	8278	46	FSM	ENSG00000196924.19	ENST00000360319.9	8278	46	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_39	494.94392050458	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	154371283	154348528	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
WTC11_00092150	chrX	-	8541	47	FSM	ENSG00000196924.19	ENST00000676696.1	8541	47	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_39	616.934555864138	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGTGGCTGTAGCT	NA	False	NA	-7	True	AATAAA	-16	NA	154371245	154348530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154365744_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
WTC11_00092151	chrX	-	8507	48	FSM	ENSG00000196924.19	ENST00000369850.10	8507	48	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_47	613.370663503347	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGTGGCTGTAGCT	NA	False	NA	-7	True	AATAAA	-16	NA	154374634	154348530	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872_154371362_154374505
WTC11_00092152	chrX	-	5374	22	FSM	ENSG00000196924.19	ENST00000490936.5	5374	22	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_21	283.336686654826	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGCGCTGCTTGTCT	NA	False	NA	-124	True	NA	NA	NA	154359638	154348647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483
WTC11_00092161	chrX	-	3010	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	-2	0	0	multi-exon	FALSE	canonical	3	24	junction_9	17.7979052727776	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154412090	154401235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
WTC11_00092162	chrX	-	2666	8	FSM	ENSG00000013563.14	ENST00000369808.7	2666	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	25.0069378128453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	154409278	154401757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154408557
WTC11_00092163	chrX	-	2652	9	FSM	ENSG00000013563.14	ENST00000014935.7	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	11.8848643240047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	154410039	154401757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417
WTC11_00092165	chrX	-	1044	4	NNC	ENSG00000196976.8	novel	967	3	NA	NA	-35	70556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	840.716493368735	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	154479316	154407218	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154407255_154477768_154478059_154478282_154478412_154478727
WTC11_00092166	chrX	-	594	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	6	33	-6	multi-exon	FALSE	canonical	3	32	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTCTCTGGCACTT	NA	False	NA	0	True	AATAAA	-17	NA	154428479	154424383	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154424626_154428127
WTC11_00092167	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1702	junction_1	76.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	NA	False	NA	-4	True	AATAAA	-19	NA	154479257	154477768	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154478059_154478282_154478412_154478727
WTC11_00092168	chrX	-	2443	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	-118	2	-118	-2	multi-exon	FALSE	canonical	3	318	junction_2	17.7826382244655	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGATTGTGCGTCCAAT	NA	False	NA	-6	True	AATAAA	-20	NA	154486733	154483718	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
WTC11_00092169	chrX	-	629	2	FSM	ENSG00000102178.13	ENST00000477777.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAGAGGCACCGGCGA	NA	False	NA	NA	False	NA	NA	NA	154486102	154485352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154485650_154485770
WTC11_00092171	chrX	-	2161	2	FSM	ENSG00000126903.16	ENST00000263512.5	2161	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTCTACTCTTTGCC	NA	False	NA	-1	True	AATAAA	-18	NA	154490690	154487305	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154489083_154490306
WTC11_00092172	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	51.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	NA	False	NA	-38	True	NA	NA	NA	154490663	154487342	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154489083_154490306_154490359_154490593
WTC11_00092173	chrX	-	3115	6	FSM	ENSG00000071889.17	ENST00000612856.4	3995	6	894	-14	894	0	multi-exon	FALSE	canonical	3	90	junction_2	9.99199679743744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154510518	154506158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473
WTC11_00092174	chrX	-	1805	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	-12	0	0	multi-exon	FALSE	canonical	3	75	junction_7	11.1908165475089	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516232	154506158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
WTC11_00092175	chrX	-	1817	9	FSM	ENSG00000071889.17	ENST00000434658.6	1817	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	40.0419701688116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCCCTTAATAAAGTGA	NA	False	NA	-44	True	NA	NA	NA	154516242	154506203	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
WTC11_00092178	chrX	-	685	8	ISM	ENSG00000071889.17	ENST00000359889.9	1712	10	97	1302	19	-55	5prime_fragment	FALSE	canonical	3	38	junction_7	19.7298075541159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCACGAAGGCACCCTG	NA	False	NA	NA	False	NA	NA	NA	154516139	154507460	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
WTC11_00092179	chrX	-	277	1	FSM	ENSG00000261773.1	ENST00000567614.1	792	1	491	24	491	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTAAAGCAACACTTTCA	NA	False	NA	NA	False	NA	NA	NA	154518140	154517863	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154517900_154518100
WTC11_00092180	chrX	-	2224	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_12	7.77951369516973	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCCCCTTGTCATTT	NA	False	NA	-6	True	ATTAAA	-15	NA	154546846	154531389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
WTC11_00092181	chrX	-	2255	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	16	-610	1	1	multi-exon	FALSE	canonical	3	13	junction_12	15.7762127549323	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCCCCTTGTCATTT	NA	False	NA	-6	True	ATTAAA	-15	NA	154547556	154531389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
WTC11_00092182	chrX	-	1659	8	FSM	ENSG00000275882.1	ENST00000612193.1	1073	8	2	-588	2	588	multi-exon	FALSE	canonical	3	100	junction_7	18.4291251301093	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCGTATCTTTGGCATA	NA	False	NA	NA	False	AGTAAA	-17	NA	154648273	154639389	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154640119_154640416_154640479_154640735_154640879_154641484_154641629_154642653_154642751_154643878_154644032_154645787_154645907_154648061
WTC11_00092183	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.4490160628148	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805485	154778683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
WTC11_00092188	chrX	-	269	1	FSM	ENSG00000229237.2	ENST00000413805.2	303	1	35	-1	35	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATACCATGTCTTATC	NA	False	NA	NA	False	NA	NA	NA	154817366	154817097	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154817100_154817400
WTC11_00092189	chrX	-	870	3	FSM	ENSG00000182712.16	ENST00000369479.1	864	3	0	-6	0	0	multi-exon	FALSE	canonical	3	10	junction_2	84.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155065368	155061621	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155061992_155063965_155064034_155064936
WTC11_00092190	chrX	-	609	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071134	155061621	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_155061992_155063965_155064034_155070963
WTC11_00092191	chrX	-	883	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	-2	0	2	multi-exon	FALSE	canonical	3	127	junction_2	26	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTTTGTACTAAATGTA	NA	False	NA	2	True	AATAAA	-20	NA	155071136	155061619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155061992_155063965_155064034_155070693
WTC11_00092192	chrX	-	2184	5	FSM	ENSG00000214827.11	ENST00000369476.8	2184	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.87228132326901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGATATGCCGCAGA	NA	False	NA	NA	False	AATAAA	-21	NA	155071136	155064033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155065905_155066058_155070693
WTC11_00092193	chrX	-	1138	4	FSM	ENSG00000214827.11	ENST00000482244.5	1138	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.29983164553722	3554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTTTTGCTCCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	155071136	155064927	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155070693
WTC11_00092194	chrX	-	3414	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	-1	0	1	multi-exon	FALSE	canonical	3	62	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAGTGTGTGTTATAG	NA	False	NA	-5	True	AGTAAA	-24	NA	155264491	155258233	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155261230_155264073
WTC11_00092197	chrX	-	3970	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	-18	0	18	multi-exon	FALSE	canonical	3	44	junction_2	30.6007869713396	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGTATGTATGTCCT	NA	False	NA	NA	False	AATAAA	-42	NA	155612952	155488992	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
WTC11_00092198	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	32.5819479671387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
WTC11_00092199	chrX	+	287	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGATTTCTGAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	4541326	4541613	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_4541300_4541600
WTC11_00092200	chrX	+	5661	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCACACGGACGCGCA	4891563	False	NA	40	True	AATAAA	-35	NA	4891648	4897309	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_4891600_4897300
WTC11_00092201	chrX	+	247	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAGATACAGTCATGAG	NA	False	NA	NA	False	NA	NA	NA	6273764	6274011	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_6273800_6274000
WTC11_00092203	chrX	+	305	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACTTTGTTTTTTGGTA	NA	False	NA	NA	False	NA	NA	NA	13197436	13197741	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_13197400_13197700
WTC11_00092204	chrX	+	230	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGATATAAAGGTTTC	NA	False	NA	NA	False	TTTAAA	-42	NA	16045711	16045941	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16045700_16045900
WTC11_00092205	chrX	+	285	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATTGTTAGTTCAAT	23746458	False	NA	NA	False	NA	NA	NA	23746468	23746753	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_23746500_23746800
WTC11_00092206	chrX	+	205	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTATTAGGCCGAGACAC	30105831	False	NA	NA	False	NA	NA	NA	30105891	30106096	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_30105900_30106100
WTC11_00092207	chrX	+	225	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCCCCCAACTCCCTG	NA	False	NA	NA	False	ATTAAA	-32	NA	30617950	30618175	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_30618000_30618200
WTC11_00092208	chrX	+	650	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAGGAATTATAGAACA	NA	False	NA	NA	False	NA	NA	NA	47509781	47510431	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47509800_47510400
WTC11_00092209	chrX	+	221	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGCAAGTCCCGGAGA	NA	False	NA	NA	False	NA	NA	NA	47806938	47807159	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47806900_47807200
WTC11_00092210	chrX	+	432	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTTGCCAATTATAACT	NA	False	NA	NA	False	TATAAA	-6	NA	47905927	47906359	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47905900_47906400
WTC11_00092211	chrX	+	304	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGCTTTTTTAAGC	NA	False	NA	NA	False	NA	NA	NA	51772589	51772893	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_51772600_51772900
WTC11_00092212	chrX	+	251	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAATGACTTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	52832262	52832513	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_52832300_52832500
WTC11_00092213	chrX	+	1954	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCCCACACATTGAGTT	NA	False	NA	NA	False	NA	NA	NA	69764234	69766188	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_69764200_69766200
WTC11_00092214	chrX	+	204	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGGAGCTGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71419422	71419626	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_71419400_71419600
WTC11_00092215	chrX	+	1865	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCAGC	NA	False	NA	NA	False	NA	NA	NA	74223335	74225200	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_74223300_74225200
WTC11_00092216	chrX	+	2069	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGTCTCAAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	74225400	74227469	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_74225400_74227500
WTC11_00092217	chrX	+	8813	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	676	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAGAAGA	74265345	False	NA	NA	False	NA	NA	NA	74265375	74274188	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_74265400_74274200
WTC11_00092218	chrX	+	258	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTATTAAAAACACAAAAA	NA	False	NA	NA	False	NA	NA	NA	76093009	76093267	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_76093000_76093300
WTC11_00092219	chrX	+	8882	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCCAAATGTCCAACAAT	76182147	False	NA	NA	False	NA	NA	NA	76182250	76191132	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_76182200_76191100
WTC11_00092220	chrX	+	3456	1	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGTTTAAGTGACTCA	NA	False	NA	NA	False	AATAAA	-32	NA	76191160	76194616	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_76191200_76194600
WTC11_00092221	chrX	+	242	1	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTCCCCAAAGGTCCAT	NA	False	NA	NA	False	ACTAAA	-6	NA	80570904	80571146	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_80570900_80571100
WTC11_00092222	chrX	+	325	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTAATTTTTGATTCA	NA	False	NA	NA	False	TTTAAA	-11	NA	83747438	83747763	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_83747400_83747800
WTC11_00092223	chrX	+	5895	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACATGGACGTGCATGAA	87681696	False	NA	NA	False	AATAAA	-39	NA	87681730	87687625	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_87681700_87687600
WTC11_00092224	chrX	+	240	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGAGCGAGGCTCCGTC	NA	False	NA	NA	False	NA	NA	NA	90315854	90316094	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_90315900_90316100
WTC11_00092225	chrX	+	245	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGACACGGAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	90777567	90777812	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_90777600_90777800
WTC11_00092226	chrX	+	217	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAGATTCTGAACTAAC	92275422	False	NA	NA	False	AAAACA	-14	NA	92275437	92275654	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_92275400_92275700
WTC11_00092227	chrX	+	279	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGCTTGCTACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	93024913	93025192	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_93024900_93025200
WTC11_00092228	chrX	+	2861	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGAACAGATAAATTCA	NA	False	NA	NA	False	AATAAA	-38	NA	95025889	95028750	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_95025900_95028800
WTC11_00092229	chrX	+	313	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAGCAGAAGCACTT	NA	False	NA	NA	False	AATAGA	-43	NA	95971909	95972222	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_95971900_95972200
WTC11_00092230	chrX	+	3244	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTCTACTAAAAATACAAA	98580456	False	NA	NA	False	NA	NA	NA	98582198	98585442	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_98582200_98585400
WTC11_00092231	chrX	+	337	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGCGAGGGGTCCAGGG	NA	False	NA	NA	False	NA	NA	NA	109054118	109054455	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_109054100_109054500
WTC11_00092232	chrX	+	587	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCAGCGAAGGGAGATA	NA	False	NA	NA	False	NA	NA	NA	109869932	109870519	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_109869900_109870500
WTC11_00092233	chrX	+	336	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGTGTGCAGCAGCTG	111547211	False	NA	NA	False	NA	NA	NA	111547221	111547557	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111547200_111547600
WTC11_00092234	chrX	+	282	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCATTTCCTTTCCATCG	111547700	False	NA	NA	False	NA	NA	NA	111547710	111547992	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111547700_111548000
WTC11_00092235	chrX	+	393	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGAAGCAGCCCTGAGA	111548693	False	NA	NA	False	NA	NA	NA	111548703	111549096	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111548700_111549100
WTC11_00092236	chrX	+	569	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	114057613	False	NA	19	True	AATAAA	-15	NA	114057623	114058192	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114057600_114058200
WTC11_00092237	chrX	+	2122	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTCTAAGTGAAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	114601593	114603715	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114601600_114603700
WTC11_00092238	chrX	+	269	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAATAAGGGATTGGGG	114605621	False	NA	NA	False	NA	NA	NA	114605632	114605901	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114605600_114605900
WTC11_00092239	chrX	+	442	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAGCATCCCTTACTT	NA	False	NA	NA	False	NA	NA	NA	116104851	116105293	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_116104900_116105300
WTC11_00092241	chrX	+	306	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTTTTTAAATTGTG	NA	False	NA	NA	False	NA	NA	NA	120497772	120498078	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_120497800_120498100
WTC11_00092243	chrX	+	584	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149772242	149772826	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_149772200_149772800
WTC11_00092245	chrX	+	2091	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	75.4545409839729	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276769	True	NA	13	True	AATAAA	-21	NA	281423	303356	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290793_291498_291655_293034_293219_299096_299393_302592
WTC11_00092250	chrX	+	3970	5	NIC	ENSG00000197976.12	novel	3232	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	59	junction_4	178.930677917455	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	1587831	True	NA	3	True	AATAAA	-5	NA	1591589	1602502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1600208_1600658
WTC11_00092251	chrX	+	1048	8	Fusion	ENSG00000223773.8_ENSG00000277120.5	novel	952	9	NA	NA	48	0	multi-exon	FALSE	canonical	3	17	junction_7	34.9197330330866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	2607699	True	NA	15	True	AATAAA	-16	NA	2609238	2638329	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2637973
WTC11_00092252	chrX	+	3938	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-78	771	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	70.249110314651	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAACCTTTTTGGCAC	NA	False	NA	NA	False	AATATA	-43	NA	2828743	2883591	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
WTC11_00092253	chrX	+	401	2	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGTGTCCCTTGCACTT	4380846	True	NA	NA	False	AATAAA	-17	NA	4380917	4391584	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_4380955_4391220
WTC11_00092254	chrX	+	221	2	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGGTGTCTGGAATGAGA	NA	False	NA	NA	False	NA	NA	NA	6271790	6273217	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_6271802_6273007
WTC11_00092255	chrX	+	5589	18	FSM	ENSG00000101849.18	ENST00000407597.7	5571	18	-18	0	-18	0	multi-exon	FALSE	canonical	1	2	junction_1	19.477784346403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	9463248	True	NA	26	True	AATAAA	-22	NA	9463301	9719740	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9463463_9501779_9501850_9640272_9640361_9653544_9653690_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
WTC11_00092256	chrX	+	7509	10	NIC	ENSG00000146950.13	novel	7474	10	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	10.8843527966742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTCTTTGATTTAC	9784637	True	NA	11	True	AATAAA	-20	NA	9786390	9949443	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_9786711_9873651_9873804_9890976_9891109_9894357_9896699_9898189_9898291_9932174_9932871_9937133_9937686_9939194_9939367_9944643_9944914_9946670
WTC11_00092257	chrX	+	7979	17	FSM	ENSG00000169933.17	ENST00000675598.1	8453	17	474	0	66	0	multi-exon	FALSE	canonical	0	0	junction_1	2.02233621092043	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGCCTGGTGCATGCA	12138748	False	NA	NA	False	AATAAA	-24	NA	12138946	12724523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12139013_12498679_12498797_12609720_12609882_12614778_12614882_12674862_12674909_12683482_12683588_12686096_12686205_12690194_12690327_12694334_12694455_12701873_12702011_12704358_12704486_12706825_12706916_12707468_12707652_12710398_12710538_12716068_12717134_12717500_12718791_12720533
WTC11_00092258	chrX	+	2537	3	FSM	ENSG00000176896.8	ENST00000490617.1	2537	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGCTGATTTTTTTTCC	13652933	True	NA	92	True	NA	NA	NA	13653188	13664828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13653313_13655288_13655374_13662500
WTC11_00092259	chrX	+	2988	2	FSM	ENSG00000176896.8	ENST00000380600.1	2988	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTACTCTCCAAAATA	13655039	False	NA	7	True	AATAAA	-18	NA	13655294	13665409	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13655374_13662500
WTC11_00092261	chrX	+	6735	22	FSM	ENSG00000046651.16	ENST00000682562.1	6735	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	38.8970966395196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGACTCTGCACATTA	13732964	True	NA	NA	False	AATAAA	-41	NA	13734845	13770855	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13740088_13740214_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00092262	chrX	+	1441	5	NIC	ENSG00000186312.10	novel	926	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	53.4994158846618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674877	False	NA	NA	False	AATAAA	-21	NA	15674909	15703724	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675025_15675689_15675779_15688660_15688859_15692962_15693059_15702781
WTC11_00092263	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.1946708395698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674885	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
WTC11_00092264	chrX	+	1205	3	NIC	ENSG00000186312.10	novel	926	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	59	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15673737	True	NA	NA	False	AATAAA	-21	NA	15675714	15703724	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675779_15688660_15688859_15702781
WTC11_00092265	chrX	+	210	1	FSM	ENSG00000200620.1	ENST00000363750.1	139	1	28	-99	28	99	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTCACCAGAACACATA	NA	False	NA	NA	False	AATACA	-28	NA	15716235	15716445	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15716200_15716400
WTC11_00092266	chrX	+	1471	3	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	39	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTTCGGGTCTTCAT	16576793	False	NA	22	True	AATAAA	-25	NA	16577137	16584002	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567_16581717_16582828
WTC11_00092269	chrX	+	2639	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	62	3	18	0	multi-exon	TRUE	canonical	1	2	junction_1	6.09918027279076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737234	True	NA	10	True	AATAAA	-20	NA	17737510	17754985	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
WTC11_00092270	chrX	+	3363	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	10	18	10	-18	multi-exon	FALSE	canonical	3	14	junction_3	401.569782229689	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGTGAAAAAGAGATGAA	19332125	True	NA	18	True	AATAAA	-20	NA	19343902	19361687	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
WTC11_00092271	chrX	+	4109	9	NIC	ENSG00000012174.12	novel	4446	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.9350025920165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	21837639	True	NA	24	True	AATAAA	-32	NA	21839653	21885423	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21878041_21878137_21878496_21878693_21880896_21880973_21882432
WTC11_00092272	chrX	+	1750	1	FSM	ENSG00000230797.3	ENST00000429584.3	2754	1	-110	1114	-110	-1114	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAATTATCTTCCAGGA	NA	False	NA	NA	False	AAAACA	-32	NA	21855876	21857626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21855900_21857600
WTC11_00092274	chrX	+	425	1	FSM	ENSG00000184735.7	ENST00000327968.7	3630	1	2174	1031	2174	-1031	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTCTCTTAAAAATAC	NA	False	NA	NA	False	AGTAAA	-21	NA	23002133	23002558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23002100_23002600
WTC11_00092275	chrX	+	12878	3	FSM	ENSG00000165186.12	ENST00000379361.5	12883	3	0	5	0	-5	multi-exon	FALSE	canonical	2	11	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTATCATCTCACAT	23334828	True	NA	NA	False	ATTAAA	-13	NA	23334848	23404369	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23335227_23379590_23380252_23392530
WTC11_00092276	chrX	+	363	1	FSM	ENSG00000226774.1	ENST00000445047.1	438	1	103	-28	103	28	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTCATGTTT	NA	False	NA	3	True	AATAAA	-16	NA	23351115	23351478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23351100_23351500
WTC11_00092278	chrX	+	641	2	FSM	ENSG00000130066.17	ENST00000462639.1	826	2	185	0	185	0	multi-exon	FALSE	canonical	3	604	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23785417	False	NA	24	True	AATAAA	-17	NA	23785444	23786210	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23785561_23785685
WTC11_00092281	chrX	+	801	5	FSM	ENSG00000101868.13	ENST00000494204.1	806	5	0	5	0	-5	multi-exon	FALSE	canonical	3	172	junction_1	17.9304210770411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCACAGCTTGCTTTTAT	24812806	True	NA	NA	False	TTTAAA	-26	NA	24812829	24841978	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651
WTC11_00092282	chrX	+	236	1	FSM	ENSG00000232368.1	ENST00000431458.1	528	1	-73	365	-73	-365	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTGAGGAAAAGTGCAAG	NA	False	NA	NA	False	NA	NA	NA	30630224	30630460	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30630200_30630500
WTC11_00092284	chrX	+	600	1	FSM	ENSG00000226781.1	ENST00000436520.1	327	1	-90	-183	-90	183	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTGATGTGTGGTTTAT	NA	False	NA	9	True	AATAAA	-25	NA	33041304	33041904	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_33041300_33041900
WTC11_00092285	chrX	+	498	1	FSM	ENSG00000235510.1	ENST00000421222.1	227	1	-274	3	-274	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGAGGGCCCGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	36957638	36958136	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_36957600_36958100
WTC11_00092287	chrX	+	1683	7	FSM	ENSG00000156298.13	ENST00000419600.3	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	11.0754984838908	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTCTGGTTCTGTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	38666095	38688920	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
WTC11_00092288	chrX	+	3826	4	NNC	ENSG00000165175.17	novel	3758	3	NA	NA	-7	50734	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.118091955734	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGATACAAAGATGTGAA	38798196	True	NA	NA	False	NA	NA	NA	38801446	38857271	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_38801488_38802534_38804414_38804682_38806520_38857202
WTC11_00092289	chrX	+	3825	4	NNC	ENSG00000165175.17	novel	3758	3	NA	NA	-7	50734	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.118091955734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGATACAAAGATGTGAA	38798196	True	NA	NA	False	NA	NA	NA	38801446	38857271	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_38801488_38802534_38804414_38804682_38806519_38857202
WTC11_00092292	chrX	+	2691	2	FSM	ENSG00000223486.1	ENST00000447651.1	2691	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGAGAAAACACTCCGCAT	40009258	False	NA	22	True	AATAAA	-33	NA	40009275	40012182	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40009802_40010017
WTC11_00092293	chrX	+	1469	2	Genic_Genomic	ENSG00000288856.1	novel	1074	1	NA	NA	-660	7	multi-exon	FALSE	canonical	3	9	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCATATTTTCCTTTG	40171230	True	NA	18	True	AATAAA	-23	NA	40171335	40173076	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_40171457_40171728
WTC11_00092294	chrX	+	1984	8	FSM	ENSG00000182220.15	ENST00000636409.1	1962	8	-22	0	-22	0	multi-exon	FALSE	canonical	2	8	junction_3	349.034353025367	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAATGTCTATCAAGAG	NA	False	NA	-24	True	NA	NA	NA	40580871	40606588	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
WTC11_00092295	chrX	+	2037	9	FSM	ENSG00000182220.15	ENST00000378438.9	2022	9	-15	0	0	0	multi-exon	FALSE	canonical	2	22	junction_8	325.528392578896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGATGATTCCAAATT	40570467	True	NA	7	True	AATAAA	-1	NA	40580942	40606619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
WTC11_00092296	chrX	+	208	1	FSM	ENSG00000182220.15	ENST00000637793.1	2131	1	1468	455	1417	-408	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGGAAGTGTAGTGCAT	40599010	False	NA	NA	False	NA	NA	NA	40599034	40599242	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40599000_40599200
WTC11_00092299	chrX	+	4786	16	FSM	ENSG00000215301.11	ENST00000457138.7	4786	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	170.921294427842	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGGTTTATTTTCAGA	41333584	True	NA	-24	True	AATAAA	-34	NA	41333912	41350224	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
WTC11_00092300	chrX	+	5594	17	FSM	ENSG00000215301.11	ENST00000645080.1	5594	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	183.169277923455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGTTTTTTTTTTT	41321339	True	NA	9	True	NA	NA	NA	41334161	41349891	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41337690_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
WTC11_00092301	chrX	+	4693	14	FSM	ENSG00000215301.11	ENST00000646679.1	4693	14	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_12	117.931782507701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATATTCTGATTTTATT	41341037	False	NA	-24	True	NA	NA	NA	41341069	41350163	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
WTC11_00092303	chrX	+	1626	1	FSM	ENSG00000214019.2	ENST00000397254.2	1590	1	71	-107	71	107	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATACAATTCCCGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	44029402	44031028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44029400_44031000
WTC11_00092305	chrX	+	1053	1	FSM	ENSG00000214016.3	ENST00000412542.1	878	1	-108	-67	-108	67	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	AATAAA	-13	NA	44740978	44742031	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44741000_44742000
WTC11_00092306	chrX	+	5157	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66915	0	intron_retention	FALSE	canonical	3	100	junction_13	54.3339266295967	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	44948892	True	NA	20	True	AATATA	-36	NA	44951150	45112542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00092307	chrX	+	6241	29	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66915	0	intron_retention	FALSE	canonical	3	33	junction_12	74.7941648247825	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTATAATAGTAGAAAA	44948892	True	NA	7	True	AATAAA	-16	NA	44951150	45112602	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45106541_45107537_45110078_45110250_45111381
WTC11_00092308	chrX	+	4764	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66909	-24	intron_retention	FALSE	canonical	3	30	junction_11	68.423838488683	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATTTTAAGGAGTTCT	44948898	True	NA	52	True	NA	NA	NA	44951156	45112134	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00092309	chrX	+	4928	27	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66907	-16	intron_retention	FALSE	canonical	3	26	junction_1	61.9503045729913	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAATCTGATTATA	44948900	True	NA	95	True	AAAAAG	-30	NA	44951158	45112309	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951310_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00092310	chrX	+	651	5	FSM	ENSG00000147121.16	ENST00000476762.5	585	5	-34	-32	-29	32	multi-exon	FALSE	canonical	3	53	junction_1	7.39509972887452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTGTTTGGCATTCA	46446509	True	NA	NA	False	NA	NA	NA	46447262	46463481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197
WTC11_00092311	chrX	+	1024	7	FSM	ENSG00000147121.16	ENST00000377919.6	993	7	-31	0	-29	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1202863454407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCTGCATATTAAATT	46446509	True	NA	NA	False	AATAAA	-18	NA	46447262	46472526	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472024
WTC11_00092314	chrX	+	204	1	FSM	ENSG00000188459.4	ENST00000444248.1	1494	1	-25	1315	-25	-1315	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCTCCGGTAAGCT	NA	False	NA	NA	False	AGTAAA	-45	NA	47803270	47803474	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47803300_47803500
WTC11_00092315	chrX	+	11253	5	FSM	ENSG00000197779.15	ENST00000338637.13	11230	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	13	junction_4	3.16227766016838	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGGACATAGTTTT	47836037	True	NA	5	True	AATAAA	-25	NA	47836878	47925627	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47836988_47846104_47846322_47887998_47888126_47895844_47895941_47914923
WTC11_00092317	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	104.786568089956	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473687	True	NA	16	True	ATTAAA	-20	NA	48476160	48486299	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
WTC11_00092318	chrX	+	1844	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	54.0509019351204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTCAATTTAATATA	48473729	True	NA	22	True	ATTAAA	-26	NA	48476202	48486305	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
WTC11_00092321	chrX	+	574	4	FSM	ENSG00000102312.24	ENST00000486272.1	567	4	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.1809358517739	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCGTGCTGCTCAGC	48507793	True	NA	NA	False	NA	NA	NA	48508958	48511375	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509423_48509708_48509892_48509957_48511294
WTC11_00092322	chrX	+	1987	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	33.6050855548372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507827	True	NA	16	True	AATAAA	-17	NA	48508992	48520808	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00092323	chrX	+	2180	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	25.7115408587921	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATACAATTTGTTAT	48507793	True	NA	-31	True	NA	NA	NA	48508958	48520761	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00092324	chrX	+	1783	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	-94	-314	-52	0	multi-exon	TRUE	canonical	2	4	junction_3	265.222509587397	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTATTCTTACTCAGC	NA	False	NA	20	True	ATTAAA	-22	NA	48574396	48578291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
WTC11_00092325	chrX	+	1884	3	FSM	ENSG00000102317.18	ENST00000354480.2	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTATTCTTACTCAGC	48575774	False	NA	20	True	ATTAAA	-22	NA	48575898	48578291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48576420_48576507_48576605_48577025
WTC11_00092327	chrX	+	952	8	ISM	ENSG00000094631.21	ENST00000334136.11	4118	29	39	18017	-4	0	5prime_fragment	FALSE	canonical	3	63	junction_1	24.2057507081879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48800545	True	NA	2	True	AATAAA	-16	NA	48802105	48806959	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
WTC11_00092328	chrX	+	4176	30	NNC	ENSG00000094631.21	novel	4147	29	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_24	42.7077840176191	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800657	False	NA	28	True	AATAAA	-19	NA	48802217	48824976	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822184_48822264_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00092329	chrX	+	2783	6	ISM	ENSG00000094631.21	ENST00000488543.1	2484	7	2045	20	-2026	0	3prime_fragment	FALSE	canonical	3	131	junction_1	19.4319324823858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGCTGTTAAAAAA	48821480	False	NA	8	True	NA	NA	NA	48821491	48824956	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00092331	chrX	+	788	6	FSM	ENSG00000269313.5	ENST00000614322.4	780	6	-8	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	2.78567765543682	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGCCGCCGATGGCCCC	49162652	False	NA	NA	False	NA	NA	NA	49162668	49166214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49162746_49163782_49163930_49164706_49164790_49164907_49165091_49165189_49165362_49166088
WTC11_00092332	chrX	+	1308	4	FSM	ENSG00000269313.5	ENST00000615915.4	1757	4	449	0	-163	0	multi-exon	FALSE	canonical	2	5	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTGCCAGGCGCTC	49164370	False	NA	NA	False	AATAAA	-15	NA	49164380	49166632	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49164790_49164907_49165091_49165189_49165362_49166088
WTC11_00092333	chrX	+	1458	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	-11	6	intron_retention	FALSE	canonical	3	30	junction_4	10.8282039138539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGCATCTTTTGTGA	49269322	True	NA	15	True	AATAAA	-24	NA	49269831	49301467	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49270874_49281405_49281462_49281980_49282064_49299275_49299436_49301350
WTC11_00092334	chrX	+	1430	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	-13	6	intron_retention	FALSE	canonical	3	27	junction_2	12.0701077045733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGCATCTTTTGTGA	49269347	True	NA	15	True	AATAAA	-24	NA	49269856	49301467	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49270874_49281405_49281462_49281983_49282064_49299275_49299436_49301350
WTC11_00092341	chrX	+	5092	2	FSM	ENSG00000184194.6	ENST00000332582.5	4787	2	-307	2	-307	-2	multi-exon	FALSE	canonical	2	3	junction_1	0	1539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTTGTTTCTTTTTT	NA	False	NA	NA	False	CATAAA	-16	NA	53048481	53080613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53049485_53076524
WTC11_00092342	chrX	+	2913	7	NIC	ENSG00000184205.14	novel	2815	7	NA	NA	-86	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	54.521147782815	3382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCCGCTTCGAGTCTT	NA	False	NA	15	True	AATAAA	-16	NA	53082280	53088539	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_53083306_53084531_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
WTC11_00092344	chrX	+	2707	17	NIC	ENSG00000130119.17	novel	2638	17	NA	NA	-4	44	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	16.593955978006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGTATTTTGTTAC	54522164	True	NA	11	True	AATAAA	-22	NA	54530274	54621565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
WTC11_00092345	chrX	+	1398	1	ISM	ENSG00000130119.17	ENST00000360845.3	8684	16	33660	2013	33566	-2013	mono-exon	FALSE	NA	NA	NA	NA	NA	9092	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	54563865	False	NA	6	True	AGTAAA	-16	NA	54563878	54565276	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_54563900_54565300
WTC11_00092346	chrX	+	2119	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	130	junction_1	372.76112212336	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54807032	True	NA	25	True	ATTAAA	-19	NA	54809097	54816015	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
WTC11_00092348	chrX	+	2617	14	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	98.8583949319465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916848	True	NA	NA	False	ATTAAA	-14	NA	54920810	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
WTC11_00092349	chrX	+	4772	12	ISM	ENSG00000067445.22	ENST00000375022.8	2306	13	22	5	-13	-3	intron_retention	FALSE	canonical	3	231	junction_1	32.7454494977534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATTGGAGTTTTTTCTG	54916875	True	NA	NA	False	ATTAAA	-9	NA	54920837	54931426	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602
WTC11_00092351	chrX	+	1411	10	NIC	ENSG00000083750.13	novel	2051	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	16.7693135382224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716872	True	NA	NA	False	AATAAA	-17	NA	55717757	55758774	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_55717789_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
WTC11_00092352	chrX	+	2901	9	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	37	27	37	-27	intron_retention	FALSE	canonical	2	23	junction_6	12.5871958751741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAATAAACTTTTGGTG	55716900	True	NA	NA	False	ATTAAA	-19	NA	55717785	55758747	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215
WTC11_00092354	chrX	+	1281	2	FSM	ENSG00000227486.3	ENST00000653318.2	926	2	1	-356	1	356	multi-exon	FALSE	canonical	3	12	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAATAGGAAAATGACAT	55907972	True	NA	NA	False	NA	NA	NA	55908224	56015549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_56014844
WTC11_00092355	chrX	+	3888	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	-238	-2754	-238	1144	multi-exon	FALSE	canonical	1	2	junction_2	503.985008595384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCAAACAAAAATTGTAC	NA	False	NA	NA	False	ACTAAA	-8	NA	56729002	56820323	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
WTC11_00092357	chrX	+	557	1	FSM	ENSG00000236852.1	ENST00000455793.1	1077	1	321	199	321	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAGGGTAATAAAGC	NA	False	NA	NA	False	TTTAAA	-4	NA	62779570	62780127	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_62779600_62780100
WTC11_00092358	chrX	+	2601	1	FSM	ENSG00000228158.2	ENST00000422965.1	589	1	-1392	-620	-1392	620	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAATAAAAGCCA	65406384	True	NA	NA	False	TATAAA	-29	NA	65406691	65409292	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_65406700_65409300
WTC11_00092361	chrX	+	10667	8	FSM	ENSG00000169083.18	ENST00000374690.9	10667	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.60298102261266	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTCATCAGAGTTC	67543128	True	NA	12	True	CATAAA	-17	NA	67544020	67730619	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_67546763_67643255_67643408_67686009_67686127_67711401_67711690_67717477_67717623_67721832_67721964_67722826_67722985_67723685
WTC11_00092364	chrX	+	5272	8	FSM	ENSG00000158813.18	ENST00000374553.6	5272	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	2.54750778573243	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	69615379	True	NA	26	True	AATAAA	-23	NA	69616066	70039469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033523_70035357
WTC11_00092365	chrX	+	5235	8	FSM	ENSG00000158813.18	ENST00000374552.9	5235	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	2.79941684889506	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCGTGAGTACTTCCTAC	69615425	True	NA	29	True	AATAAA	-26	NA	69616112	70039472	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033529_70035357
WTC11_00092366	chrX	+	6811	46	FSM	ENSG00000184634.17	ENST00000687382.1	6764	46	79	-126	6	0	multi-exon	FALSE	canonical	0	0	junction_39	26.2719302866701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	71115796	True	NA	24	True	AATACA	-18	NA	71118634	71142450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137781_71137855_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
WTC11_00092367	chrX	+	3474	11	FSM	ENSG00000147140.17	ENST00000676499.1	3454	11	-20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	762.447696566787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242181	True	NA	21	True	ATTAAA	-11	NA	71283589	71301158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297587_71298509_71298706_71298817_71299941
WTC11_00092368	chrX	+	3262	10	FSM	ENSG00000147140.17	ENST00000677826.1	3242	10	-20	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	245.505877327752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242181	True	NA	23	True	ATTAAA	-13	NA	71283589	71301160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71297048_71297376_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00092369	chrX	+	7629	38	FSM	ENSG00000147133.17	ENST00000373790.9	7629	38	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	15.6499789379947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAGTGTGGAGAATGGT	71364491	True	NA	28	True	AATAAA	-18	NA	71366263	71466005	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71377012_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
WTC11_00092370	chrX	+	7742	39	NIC	ENSG00000147133.17	novel	7697	39	NA	NA	8	0	intron_retention	FALSE	canonical	2	6	junction_22	16.5208883142681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAGTGTGGAGAATGGT	71364540	True	NA	28	True	AATAAA	-18	NA	71366312	71466005	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397255_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459149_71459252_71459551_71459709_71460625_71460804_71463823
WTC11_00092371	chrX	+	3874	9	FSM	ENSG00000147133.17	ENST00000492404.6	4124	9	250	0	250	0	multi-exon	FALSE	canonical	3	48	junction_6	10.8714074525794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATATTGTTTGAATT	NA	False	NA	14	True	GGGGCT	-42	NA	71421297	71465937	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71421377_71423116_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
WTC11_00092373	chrX	+	7244	20	FSM	ENSG00000147162.14	ENST00000488174.5	7243	20	-1	0	-1	0	multi-exon	FALSE	canonical	2	14	junction_1	91.8696836892532	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACCTGTTTCACCAGT	71528733	True	NA	NA	False	AATATA	-20	NA	71533102	71574655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71548024_71554512_71554593_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
WTC11_00092374	chrX	+	4029	3	FSM	ENSG00000281852.1	ENST00000627173.1	4113	3	0	84	0	-84	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAATTTGTTATATC	NA	False	NA	NA	False	TATAAA	-19	NA	71697195	71706371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71697302_71700820_71701044_71702671
WTC11_00092376	chrX	+	7797	1	ISM	ENSG00000204131.10	ENST00000633930.2	13633	8	234645	0	1306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCACCCTCTGG	NA	False	NA	19	True	AATAAA	-19	NA	72145489	72153286	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_72145500_72153300
WTC11_00092377	chrX	+	374	3	NIC	ENSG00000102309.15	novel	1239	4	NA	NA	0	195	combination_of_known_splicesites	FALSE	canonical	3	398	junction_1	494.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATACATTTTGTTTCTT	72171876	True	NA	NA	False	AATAAA	-23	NA	72181756	72197549	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_72181829_72196784_72196905_72197367
WTC11_00092378	chrX	+	2447	1	FSM	ENSG00000184388.6	ENST00000373521.4	3168	1	418	303	418	-303	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAGTAGTTATTGG	NA	False	NA	NA	False	NA	NA	NA	73003356	73005803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73003400_73005800
WTC11_00092379	chrX	+	1451	1	FSM	ENSG00000230146.1	ENST00000446112.1	1176	1	-108	-167	-108	167	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGTTACATTAACTGA	NA	False	NA	NA	False	AATAAA	-20	NA	73769139	73770590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73769100_73770600
WTC11_00092380	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	247.728794361002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007529	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
WTC11_00092382	chrX	+	2601	7	NIC	ENSG00000225470.8	novel	5531	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	10	junction_3	190.173093668783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATATCTATATGTGAAAT	73937038	True	NA	12	True	AATAAA	-24	NA	73944339	74004547	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953_74000497_74004269
WTC11_00092383	chrX	+	1220	2	Genic_Genomic	ENSG00000225470.8	novel	9658	6	NA	NA	-20910	6	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGAAGACTTAACCTT	73973637	False	NA	17	True	AATAAA	-24	NA	73973647	74012176	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_73973772_74011080
WTC11_00092386	chrX	+	503	1	FSM	ENSG00000233254.1	ENST00000453468.1	483	1	-2	-18	-2	18	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACATCTGGGCTGTA	NA	False	NA	NA	False	AATAAA	-1	NA	75384343	75384846	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75384300_75384800
WTC11_00092387	chrX	+	603	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	2	0	2	0	multi-exon	FALSE	canonical	2	13	junction_1	2828.84550459881	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	77874844	True	NA	25	True	AATAAA	-19	NA	77899441	77905385	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
WTC11_00092388	chrX	+	789	2	FSM	ENSG00000289132.1	ENST00000685301.1	848	2	59	0	-2	0	multi-exon	FALSE	canonical	2	7	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTGGCCAAAGTCTTAA	80809951	True	NA	43	True	NA	NA	NA	80810149	80812803	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80810246_80812110
WTC11_00092389	chrX	+	649	2	FSM	ENSG00000289132.1	ENST00000689511.1	766	2	83	34	23	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTTTGGAACAATTAGA	80809976	True	NA	9	True	AATAAA	-19	NA	80810174	80812769	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80810246_80812191
WTC11_00092390	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	190.58200334764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	81198233	True	NA	6	True	ATTAAA	-16	NA	81202127	81297597	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
WTC11_00092391	chrX	+	4554	11	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	44.7487429991056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85246023_85246929_85247184_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
WTC11_00092392	chrX	+	4170	10	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	36.3042697213427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242485	True	NA	19	True	AATAAA	-15	NA	85244120	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
WTC11_00092394	chrX	+	3212	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	-6	0	6	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATAGTATTCTATT	91434672	True	NA	NA	False	AATAAA	-25	NA	91434838	91438590	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_91434895_91435434
WTC11_00092395	chrX	+	9095	6	NNC	ENSG00000102290.23	novel	9022	11	NA	NA	0	3507	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	33.1058907144937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATAGGTTTCTATTTT	91774802	True	NA	NA	False	TTTAAA	-10	NA	91779374	91887514	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_91779685_91809465_91809635_91810472_91810579_91835460_91836045_91876780_91879274_91882081
WTC11_00092396	chrX	+	1490	4	ISM	ENSG00000102290.23	ENST00000298274.12	4767	6	142	47504	28	-43495	5prime_fragment	FALSE	canonical	3	21	junction_1	25.6645020732269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAACAATTTAATTTATT	91774830	False	NA	NA	False	AATAAA	-17	NA	91779402	91836503	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460
WTC11_00092397	chrX	+	1295	5	ISM	ENSG00000102290.23	ENST00000682573.1	9022	11	13	787106	13	-43874	5prime_fragment	FALSE	canonical	3	68	junction_2	4.18330013267038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTAAGCCATCACCC	91774815	True	NA	NA	False	AATAAA	-22	NA	91779387	91836124	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460
WTC11_00092398	chrX	+	3020	1	ISM	ENSG00000102290.23	ENST00000682573.1	9022	11	840836	0	784706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	92620210	92623230	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_92620200_92623200
WTC11_00092399	chrX	+	2767	2	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTCACACAAAGCCTGT	92823948	True	NA	8	True	AATAAA	-8	NA	92824802	92829295	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_92827022_92828747
WTC11_00092401	chrX	+	219	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGGTGGCGAAAATTT	94699074	False	NA	NA	False	AATAAA	-13	NA	94699096	94699315	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94699100_94699300
WTC11_00092402	chrX	+	3691	3	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGCAAGACACAGGGGA	94700720	False	NA	NA	False	NA	NA	NA	94700787	94705035	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94701956_94702050_94704386_94704847
WTC11_00092403	chrX	+	9223	28	NNC	ENSG00000147202.19	novel	9203	27	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	110.467630524466	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTGCTGCCTATGATA	96683090	True	NA	5	True	AATAAA	-18	NA	96684841	97604996	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97599252
WTC11_00092404	chrX	+	3574	27	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	142.138969626174	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCATTTTGTCTGGTG	96683103	True	NA	14	True	AGTAAA	-19	NA	96684854	97469834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_96685191_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00092405	chrX	+	612	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625740	-2	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_1	199.226472889523	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTCATTTTGTCTGGT	97302600	True	NA	13	True	AGTAAA	-18	NA	97310581	97469833	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00092406	chrX	+	762	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	234.222629137323	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302597	True	NA	15	True	AGTAAA	-20	NA	97310578	97469835	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97326577_97326723_97348117_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00092411	chrX	+	1309	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.23904756996088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572116	True	NA	27	True	AATAAA	-29	NA	98573858	98865564	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
WTC11_00092412	chrX	+	1094	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	14.3061758225833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572144	True	NA	27	True	AATAAA	-29	NA	98573886	98865564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98644527_98644575_98731530_98731578_98864610
WTC11_00092414	chrX	+	3788	13	FSM	ENSG00000196440.12	ENST00000354842.5	3788	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	7.3875834268649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	101483782	True	NA	11	True	ATTAAA	-16	NA	101485474	101533459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101488443_101489316_101498144_101499367_101504936_101505356_101509363_101509428_101509589_101509679_101511024_101511056_101531643_101532013_101533083
WTC11_00092415	chrX	+	2504	1	ISM	ENSG00000196440.12	ENST00000423738.5	7729	6	7848	0	7829	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTCCTTGTCCTTGA	101493293	False	NA	22	True	AATAAA	-28	NA	101493303	101495807	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_101493300_101495800
WTC11_00092416	chrX	+	2201	4	NNC	ENSG00000126947.13	novel	2125	4	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	61.6819800806254	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546862	True	NA	NA	False	AATAAA	-30	NA	101550467	101554700	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_101550661_101550973_101551025_101551568_101551634_101552808
WTC11_00092417	chrX	+	483	3	FSM	ENSG00000286794.2	ENST00000660526.2	497	3	5	9	5	-9	multi-exon	FALSE	canonical	0	0	junction_2	0.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTACATCTCTTTGT	NA	False	NA	8	True	AATAAA	-19	NA	102142567	102143962	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102142616_102142993_102143109_102143642
WTC11_00092419	chrX	+	2771	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	1	0	1	0	multi-exon	FALSE	canonical	3	30	junction_1	43.3922676163494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597722	True	NA	17	True	AATAAA	-25	NA	102599515	102604159	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
WTC11_00092420	chrX	+	3974	3	FSM	ENSG00000198908.12	ENST00000361229.8	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAATCACTTAATATT	102719810	True	NA	11	True	AATAAA	-18	NA	102720725	102752441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102720822_102720956_102721092_102748698
WTC11_00092422	chrX	+	2348	9	NIC	ENSG00000223546.8	novel	2101	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	10.5349121970712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATAAGTCTTTTTGTG	102768175	True	NA	NA	False	AATAAA	-16	NA	102769217	102885406	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102839800_102839973_102845856_102846021_102865041_102865153_102884142
WTC11_00092425	chrX	+	1608	3	NIC	ENSG00000196507.11	novel	1124	3	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	6	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGTATCAGCCCGTT	NA	False	NA	20	True	AATAAA	-31	NA	103607416	103609926	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_103608071_103608603_103608674_103609042
WTC11_00092427	chrX	+	1231	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	-67	0	-43	0	multi-exon	FALSE	canonical	2	4	junction_1	4	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103628900	False	NA	NA	False	AATAAA	-24	NA	103628931	103630953	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103629026_103629493_103629562_103629884
WTC11_00092428	chrX	+	3607	10	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31129	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	41.7957998953111	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATCGTGTCCTTTGA	103740665	True	NA	1	True	AATAAA	-18	NA	103742588	103792614	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103746874_103746923_103774216_103774369_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
WTC11_00092429	chrX	+	3384	8	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31106	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	34.9647052360648	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATCGTGTCCTTTGA	103740688	True	NA	1	True	AATAAA	-18	NA	103742611	103792614	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
WTC11_00092431	chrX	+	765	5	NNC	ENSG00000158427.15	novel	1666	4	NA	NA	0	11637	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	54.7791018546307	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCATATGTGTGTAAT	103962486	True	NA	NA	False	AATAAA	-13	NA	103962668	103978349	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103962724_103964505_103964623_103976724_103976784_103976983_103977180_103978011
WTC11_00092432	chrX	+	1260	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	-19	0	2	0	multi-exon	FALSE	canonical	3	5	junction_3	1.24721912892465	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112289	True	NA	5	True	TATAAA	-8	NA	104112524	104115842	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
WTC11_00092433	chrX	+	7877	4	ISM	ENSG00000123575.9	ENST00000493442.2	7624	6	18610	0	-1055	0	3prime_fragment	FALSE	canonical	3	145	junction_2	11.6141675934562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	104185051	False	NA	16	True	AATAAA	-24	NA	104185062	104195902	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_104186216_104186459_104186622_104188039_104188307_104189607
WTC11_00092434	chrX	+	7911	28	NIC	ENSG00000123572.17	novel	8066	29	NA	NA	-15	-2	combination_of_known_splicesites	TRUE	canonical	2	6	junction_11	4.76354469116134	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTTGATGTCATTATT	105822353	True	NA	7	True	AATAAA	-12	NA	105822523	105958608	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_105822903_105831053_105831120_105880198_105880256_105881707_105881780_105888293_105888420_105893831_105893943_105895432_105895524_105898583_105898715_105900617_105900673_105905264_105905344_105906413_105906590_105908239_105908304_105908726_105909883_105912647_105912756_105915729_105915798_105917577_105917673_105921963_105922062_105923117_105923483_105924694_105925032_105934257_105934445_105935169_105935326_105937438_105937583_105939873_105940033_105943940_105944042_105946314_105946465_105949598_105949735_105953033_105953174_105955504
WTC11_00092435	chrX	+	4170	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	106168213	True	NA	6	True	AATAAA	-17	NA	106168307	106208956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
WTC11_00092436	chrX	+	3949	3	FSM	ENSG00000157502.13	ENST00000372552.1	3957	3	9	-1	9	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	106201730	False	NA	6	True	AATAAA	-17	NA	106201744	106208956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106201770_106203984_106204171_106205218
WTC11_00092437	chrX	+	2798	7	FSM	ENSG00000133135.14	ENST00000255499.3	2803	7	-18	23	-18	0	multi-exon	FALSE	canonical	1	3	junction_1	3.05505046330389	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTCTGGTGTTAGTT	106726590	True	NA	NA	False	AATAAA	-15	NA	106726682	106796993	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106727398_106772912_106773161_106785064_106785137_106787917_106788001_106790185_106790283_106791065_106791235_106795579
WTC11_00092438	chrX	+	2585	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	4	0	4	0	multi-exon	FALSE	canonical	2	5	junction_11	6.00688310424792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	106801285	True	NA	NA	False	AATAAA	-26	NA	106802692	106849831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
WTC11_00092439	chrX	+	5709	21	FSM	ENSG00000133138.20	ENST00000357242.10	5729	21	20	0	4	0	multi-exon	TRUE	canonical	2	3	junction_11	4.96588360717405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTACTTAAAAAGATTA	106801285	True	NA	9	True	AATAAA	-23	NA	106802692	106876150	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106850024_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
WTC11_00092442	chrX	+	6531	53	FSM	ENSG00000188153.14	ENST00000328300.11	6531	53	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_42	25.2060957570507	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	108436895	True	NA	23	True	ATTAAA	-19	NA	108439837	108697545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108670227_108670237_108674744_108674754_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
WTC11_00092443	chrX	+	4934	11	FSM	ENSG00000188153.14	ENST00000510690.2	1581	11	-2197	-1156	-2197	0	multi-exon	FALSE	canonical	1	15	junction_1	32.6073611321125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	NA	False	NA	23	True	ATTAAA	-19	NA	108672254	108697545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108674754_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
WTC11_00092444	chrX	+	2638	4	NNC	ENSG00000101888.12	novel	1085	4	NA	NA	83	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	60.337937209244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTAAGGTCTTTTGA	109536017	False	NA	28	True	AATAAA	-29	NA	109537200	109544699	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_109537414_109538044_109538132_109541474_109541620_109542506
WTC11_00092445	chrX	+	855	1	FSM	ENSG00000225366.5	ENST00000602699.1	2710	1	493	1362	493	-1362	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCATCTGCCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	110520804	110521659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110520800_110521700
WTC11_00092447	chrX	+	5821	7	NNC	ENSG00000077264.16	novel	9126	18	NA	NA	-14	-23306	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	7.2033942616581	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGGTCTTGTCAAT	111095408	True	NA	-88	True	ATTAAA	-16	NA	111096176	111129110	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_111096416_111096542_111096738_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111124250
WTC11_00092449	chrX	+	7023	2	ISM	ENSG00000077264.16	ENST00000262836.6	2178	15	93460	-6440	74394	-3	3prime_fragment	TRUE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTATTGCTTCTGTCTT	NA	False	NA	15	True	AATAAA	-16	NA	111216536	111227358	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_111216559_111220357
WTC11_00092450	chrX	+	486	4	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	43.3769011751134	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCCAGTCTTCGGTATT	111542848	False	NA	NA	False	AATAAA	-17	NA	111544175	111630984	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111544407_111582163_111582227_111630076_111630141_111630856
WTC11_00092451	chrX	+	2484	3	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	43.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTCGGTATTCCTT	111542853	False	NA	NA	False	AATAAA	-21	NA	111544180	111630988	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111546469_111630076_111630141_111630856
WTC11_00092452	chrX	+	490	4	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	28.5345794120436	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTCGGTATTCCTT	111542857	False	NA	NA	False	AATAAA	-21	NA	111544184	111630988	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111544407_111617660_111617733_111630076_111630141_111630856
WTC11_00092453	chrX	+	450	3	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_1	29.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTCGGTATTCCTT	111542825	True	NA	NA	False	AATAAA	-21	NA	111544152	111630988	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111544407_111630076_111630141_111630856
WTC11_00092454	chrX	+	1699	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	-258	-748	-187	234	multi-exon	FALSE	canonical	3	10	junction_4	34.1833292702744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTACAGTAGATTATC	NA	False	NA	82	True	NA	NA	NA	111680930	111688876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
WTC11_00092456	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	36.3715395452116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	111681162	True	NA	24	True	AATAAA	-39	NA	111681662	111688040	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
WTC11_00092457	chrX	+	3797	26	FSM	ENSG00000101901.12	ENST00000436609.5	3812	26	15	0	9	0	multi-exon	FALSE	canonical	1	1	junction_1	16.1691063451262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	111681171	True	NA	14	True	AATAAA	-25	NA	111681671	111760649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111752789_111752831_111757587_111757763_111759733
WTC11_00092459	chrX	+	693	2	NNC	ENSG00000147246.10	novel	4652	6	NA	NA	14	-322949	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAAAACGTGTCTGTG	114583694	True	NA	NA	False	CATAAA	-7	NA	114584099	114585558	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_114584660_114585425
WTC11_00092460	chrX	+	316	1	FSM	ENSG00000224664.2	ENST00000432891.2	316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCATCTTTTGTTTTATT	114589214	False	NA	NA	False	NA	NA	NA	114589619	114589935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114589600_114589900
WTC11_00092464	chrX	+	3449	3	NNC	ENSG00000229335.2	novel	3499	3	NA	NA	10	-9292	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTCAGATATTTTGTG	115839361	True	NA	20	True	AATGAA	-20	NA	115840908	115897286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_115841079_115843089_115843182_115894099
WTC11_00092466	chrX	+	1126	1	FSM	ENSG00000213526.3	ENST00000435341.1	628	1	145	-643	145	643	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAGCCCTGCCACTCA	NA	False	NA	NA	False	AATGAA	-16	NA	116963193	116964319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_116963200_116964300
WTC11_00092467	chrX	+	4070	19	NIC	ENSG00000131725.14	novel	4114	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	36.243006988322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTCCAACACTTGTT	118344307	True	NA	6	True	ATTAAA	-16	NA	118346091	118449937	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_118346581_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
WTC11_00092468	chrX	+	6326	49	FSM	ENSG00000147251.16	ENST00000633080.1	6041	49	-259	-26	-259	2	multi-exon	FALSE	canonical	0	0	junction_25	8.96666279429904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGAACTTAGCATTT	NA	False	NA	34	True	AATAAA	-38	NA	118545851	118686165	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118546117_118561382_118561518_118566004_118566183_118566573_118566654_118568078_118568163_118572322_118572464_118573805_118574019_118578524_118578648_118580096_118580180_118584734_118584858_118585040_118585118_118588136_118588322_118588412_118588479_118590209_118590303_118593213_118593338_118597430_118597553_118598029_118598117_118599138_118599229_118605237_118605357_118608071_118608142_118608230_118608357_118609277_118609350_118610271_118610419_118614691_118614776_118615599_118615712_118616201_118616241_118618549_118618729_118624538_118624656_118627503_118627580_118628162_118628273_118630378_118630491_118636345_118636413_118638079_118638128_118639434_118639578_118641189_118641306_118643456_118643595_118648944_118649128_118651963_118652078_118654601_118654818_118654903_118654962_118662685_118662793_118671022_118671146_118675935_118676050_118676590_118676738_118680481_118680693_118681057_118681249_118681693_118681795_118683078_118683218_118685687
WTC11_00092470	chrX	+	2212	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	118823698	True	NA	8	True	AATAAA	-15	NA	118823808	118826968	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
WTC11_00092473	chrX	+	1899	6	FSM	ENSG00000077721.16	ENST00000346330.6	718	6	-105	-1076	-105	0	multi-exon	FALSE	canonical	0	0	junction_4	195.532503691841	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGGTATCTTTTTTT	NA	False	NA	17	True	AATAAA	-19	NA	119574430	119584423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119581506_119581597_119582596_119582677_119583126
WTC11_00092475	chrX	+	2441	1	FSM	ENSG00000279601.1	ENST00000625181.1	2492	1	51	0	51	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGATCATGCCTTTCTT	119693601	True	NA	1	True	AATAAA	-16	NA	119693618	119696059	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119693600_119696100
WTC11_00092476	chrX	+	1199	4	NNC	ENSG00000286366.1	novel	2006	2	NA	NA	-301	-11041	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4.54606056566195	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTTTTGATTTTTT	NA	False	NA	24	True	AATAGA	-17	NA	119791669	119799908	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_119792018_119798722_119798989_119799202_119799321_119799441
WTC11_00092479	chrX	+	4555	5	Genic_Genomic	ENSG00000280142.1	novel	609	1	NA	NA	-19643	0	multi-exon	FALSE	canonical	2	4	junction_4	45.2050882091828	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTTATTGCCCTTGT	122217698	True	NA	NA	False	AATAAA	-22	NA	122222364	122242616	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122238600
WTC11_00092480	chrX	+	1059	4	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	45.2179905199984	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCTATCATGATTTT	122217731	True	NA	7	True	ACTAAA	-18	NA	122222397	122231256	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_122222603_122227324_122227431_122229771_122229895_122230631
WTC11_00092481	chrX	+	13029	1	FSM	ENSG00000280142.1	ENST00000624911.1	609	1	-6490	-5930	-6490	5930	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGTGTATTATTTGTA	122235500	False	NA	21	True	AGTAAA	-21	NA	122235517	122248546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_122235500_122248500
WTC11_00092483	chrX	+	982	4	FSM	ENSG00000125675.20	ENST00000611689.4	936	4	-46	0	-25	0	multi-exon	FALSE	canonical	3	9	junction_2	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	123183579	True	NA	11	True	AATAAA	-24	NA	123184252	123204683	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123184645_123185831_123185991_123202635_123202783_123204399
WTC11_00092485	chrX	+	6045	34	NIC	ENSG00000101972.20	novel	6179	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	61.3970952552735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958413	True	NA	NA	False	AATAAA	-22	NA	123961774	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
WTC11_00092486	chrX	+	5985	34	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	67.8804382916241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958677	False	NA	NA	False	AATAAA	-22	NA	123962038	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00092487	chrX	+	5931	33	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	58.1068183929391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTGGATTATTACT	123958671	False	NA	NA	False	AATAAA	-27	NA	123962032	124102661	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00092488	chrX	+	711	7	Antisense	novelGene_ENSG00000225689.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	3.64005494464026	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACAGTGTCAGTGGTTT	129091092	True	NA	19	True	AATAGA	-23	NA	129091411	129322958	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_129091448_129150138_129150256_129296263_129296409_129297316_129297398_129300302_129300358_129319450_129319493_129322723
WTC11_00092489	chrX	+	5192	24	FSM	ENSG00000122126.18	ENST00000371113.9	5173	24	-19	0	-19	0	multi-exon	TRUE	non_canonical	0	0	junction_1	19.3824311927425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	129538727	True	NA	16	True	AATAAA	-19	NA	129540239	129592556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
WTC11_00092490	chrX	+	5160	24	NNC	ENSG00000122126.18	novel	5173	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3824311927425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	129538762	True	NA	16	True	AATAAA	-19	NA	129540274	129592556	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_129540479_129540740_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
WTC11_00092491	chrX	+	5153	23	FSM	ENSG00000122126.18	ENST00000357121.5	5138	23	-19	4	-3	1	multi-exon	FALSE	non_canonical	0	0	junction_1	17.9706487049309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGTGATTTTGGTGAG	129538743	True	NA	17	True	AATAAA	-20	NA	129540255	129592557	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
WTC11_00092493	chrX	+	690	2	NNC	ENSG00000134594.5	novel	945	2	NA	NA	-597	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	130171353	False	NA	5	True	AATAAA	-15	NA	130171364	130184870	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_130171469_130184284
WTC11_00092494	chrX	+	1606	10	FSM	ENSG00000102078.16	ENST00000218197.9	1616	10	0	10	0	-6	multi-exon	FALSE	canonical	3	6	junction_1	31.7552367607044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATCACTTTGGCTTTG	130338525	False	NA	21	True	ATTAAA	-11	NA	130340051	130373351	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
WTC11_00092496	chrX	+	2431	9	FSM	ENSG00000147256.12	ENST00000370921.1	2447	9	13	3	13	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTCATGGCTTACTGT	NA	False	NA	NA	False	AATAAA	-20	NA	131083722	131089880	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_131083970_131084214_131084408_131084625_131084682_131084913_131085065_131085587_131085737_131085912_131086090_131086328_131086427_131086558_131086666_131088627
WTC11_00092497	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	139.187643129697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
WTC11_00092498	chrX	+	3020	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	-3	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	138.344352974742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
WTC11_00092499	chrX	+	507	3	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_2	1	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGTCCACAGTGGGATC	132161623	True	NA	NA	False	ATTAAA	-17	NA	132161723	132186951	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_132161816_132162046_132162196_132186685
WTC11_00092500	chrX	+	3771	3	FSM	ENSG00000232160.7	ENST00000441399.3	3771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGCAAATAATGTATGAA	132218075	True	NA	NA	False	CATAAA	-27	NA	132218208	132432862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132218838_132239619_132239712_132429812
WTC11_00092501	chrX	+	416	1	FSM	ENSG00000227008.2	ENST00000426577.1	416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGCAATATGTTATCT	NA	False	NA	NA	False	AAAAAG	-13	NA	133670970	133671386	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_133671000_133671400
WTC11_00092503	chrX	+	1487	3	FSM	ENSG00000227060.7	ENST00000671259.1	1567	3	76	4	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCTGTGCCTGACTT	134549831	True	NA	NA	False	AATAAA	-18	NA	134549845	134560395	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134550205_134558379_134558498_134559385
WTC11_00092505	chrX	+	1067	1	NIC	ENSG00000156500.16	novel	2598	11	NA	NA	4825	-7827	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTTTAGAGATTTATT	NA	False	NA	4	True	AATAAA	-16	NA	134843997	134845064	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_134844000_134845100
WTC11_00092506	chrX	+	6710	16	FSM	ENSG00000165359.16	ENST00000493637.6	6710	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	8.33039948355153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	135520934	False	NA	16	True	AATAAA	-26	NA	135520992	135582509	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135573034_135573938_135574063_135575083_135575227_135577192_135577296_135579787_135580163_135581049_135581144_135581527
WTC11_00092507	chrX	+	686	4	FSM	ENSG00000165359.16	ENST00000481429.1	686	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7613316585993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCATTAATGCTGGAT	NA	False	NA	9	True	AATAAA	-19	NA	135579936	135582502	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135580163_135581049_135581144_135581527_135581632_135582240
WTC11_00092508	chrX	+	4459	17	FSM	ENSG00000198689.13	ENST00000370701.6	4755	17	296	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_8	35.2995551494633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	135983877	True	NA	17	True	ATTAAA	-26	NA	135985430	136047130	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985478_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
WTC11_00092509	chrX	+	3057	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	-90	0	combination_of_known_junctions	TRUE	canonical	3	186	junction_1	154.899091007861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	136496950	False	NA	59	True	AATAAA	-27	NA	136496988	136512342	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
WTC11_00092510	chrX	+	682	3	FSM	ENSG00000233093.7	ENST00000454385.7	693	3	3	8	3	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCATCTTTCTTCAAG	NA	False	NA	NA	False	AATAAA	-10	NA	136639541	136642421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136639805_136640773_136640874_136642102
WTC11_00092511	chrX	+	646	3	FSM	ENSG00000234062.9	ENST00000431464.6	1253	3	82	525	28	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCCTCAGTTTGTA	136909275	False	NA	12	True	TATAAA	-15	NA	136909474	137021618	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136909781_136925246_136925380_137021411
WTC11_00092515	chrX	+	4203	16	FSM	ENSG00000274086.1_ENSG00000102081.16	ENST00000691214.1	4067	16	-167	31	-10	-1	multi-exon	TRUE	canonical	3	51	junction_13	40.1561396993729	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTATCTAGATGTAA	147908764	True	NA	12	True	ATTAAA	-17	NA	147911908	147951066	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948733
WTC11_00092516	chrX	+	4215	17	NIC	ENSG00000102081.16	novel	4166	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	59.2946825187554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAGTCTGACAGAT	147908907	False	NA	65	True	ATTAAA	-22	NA	147912051	147951119	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147938098_147938162_147940575_147940663_147943130_147943327_147944904_147945052_147945533_147945617_147948733
WTC11_00092518	chrX	+	644	5	ISM	ENSG00000102081.16	ENST00000475038.3	2747	16	28427	978	446	30	3prime_fragment	FALSE	canonical	3	22	junction_4	78.9350999239248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	147940580	True	NA	4	True	AATAAA	-14	NA	147940602	147948534	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948412
WTC11_00092519	chrX	+	1215	5	NIC	ENSG00000197620.11	novel	1204	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	30.3685692781204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540611	False	NA	NA	False	AATAAA	-15	NA	149540637	149547309	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_149540800_149542018_149542086_149545367_149545501_149545601_149545884_149546738
WTC11_00092520	chrX	+	1335	3	FSM	ENSG00000235254.3	ENST00000524311.1	546	3	0	-789	0	789	multi-exon	FALSE	canonical	3	51	junction_1	22	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGGGTGCCACGCCT	NA	False	NA	NA	False	NA	NA	NA	149768896	149772157	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149769074_149769698_149769823_149771123
WTC11_00092523	chrX	+	2319	2	FSM	ENSG00000013619.15	ENST00000464149.1	2888	2	427	142	427	-103	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGTAAACTTTTCTCA	150509739	False	NA	NA	False	NA	NA	NA	150509751	150514027	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150510047_150512003
WTC11_00092524	chrX	+	4180	14	NIC	ENSG00000063601.17	novel	4536	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_13	29.2663750754885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGTCTTTTTTAAG	150691069	True	NA	13	True	ATTAAA	-15	NA	150693366	150764924	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150736594_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150762564
WTC11_00092525	chrX	+	567	1	FSM	ENSG00000230508.1	ENST00000424919.1	591	1	-5	29	-5	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAGGAGGAAGACACC	150993482	False	NA	NA	False	NA	NA	NA	150993495	150994062	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150993500_150994100
WTC11_00092526	chrX	+	2411	1	ISM	ENSG00000130032.17	ENST00000674457.1	5705	4	8056	0	2963	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	151703419	False	NA	12	True	AATAAA	-23	NA	151703513	151705924	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_151703500_151705900
WTC11_00092527	chrX	+	1840	4	FSM	ENSG00000147381.12	ENST00000682265.1	1841	4	1	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	42.0819306696935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151912479	False	NA	16	True	AATAAA	-13	NA	151912509	151925166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151912543_151912801_151912970_151923452_151923525_151923599
WTC11_00092528	chrX	+	1735	3	FSM	ENSG00000147381.12	ENST00000360243.6	1773	3	38	0	13	0	multi-exon	FALSE	canonical	3	31	junction_1	33	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151918197	False	NA	20	True	AATAAA	-17	NA	151918264	151925170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151918357_151923452_151923525_151923599
WTC11_00092529	chrX	+	1688	3	FSM	ENSG00000147381.12	ENST00000431971.1	997	3	87	-778	87	0	multi-exon	FALSE	canonical	3	35	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151918951	True	NA	16	True	AATAAA	-13	NA	151918988	151925166	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151919038_151923452_151923525_151923599
WTC11_00092533	chrX	+	2155	5	NIC	ENSG00000183305.14	novel	576	6	NA	NA	2	-1	intron_retention	FALSE	canonical	3	39	junction_1	60.0687106570467	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152714602	152718605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_152714929_152715078_152715158_152715956_152716077_152716895_152716962_152717041
WTC11_00092534	chrX	+	776	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.4738029877767	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753908	152760219	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759634_152759842
WTC11_00092535	chrX	+	843	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	31.767711595266	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753892	152760219	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759685_152759842
WTC11_00092536	chrX	+	4138	21	FSM	ENSG00000147394.19	ENST00000318504.12	4101	21	-45	8	3	0	multi-exon	FALSE	canonical	2	6	junction_8	7.85668505159778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTGTTAAAGTTT	NA	False	NA	14	True	AATAAA	-15	NA	152914444	152973473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
WTC11_00092537	chrX	+	4318	23	FSM	ENSG00000147394.19	ENST00000449285.6	4328	23	3	7	3	0	multi-exon	FALSE	canonical	1	3	junction_10	8.61672408078021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTGTTAAAGTTT	NA	False	NA	14	True	AATAAA	-15	NA	152914444	152973473	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152922719_152922810_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
WTC11_00092539	chrX	+	2366	8	NIC	ENSG00000182492.16	novel	2353	8	NA	NA	-38	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	3.95381500088516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	153494765	True	NA	8	True	ATTAAA	-19	NA	153494941	153509546	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506615_153506829_153506924_153507046_153507186_153508247
WTC11_00092540	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_3	145.122936390726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775850	True	NA	39	True	AATAAA	-22	NA	153794658	153798493	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
WTC11_00092542	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	153972507	True	NA	6	True	NA	NA	NA	153972753	153983194	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153972861_153981849
WTC11_00092544	chrX	+	1305	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	-24	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	17.1227188261678	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	154367850	False	NA	18	True	AATAAA	-19	NA	154379484	154381523	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
WTC11_00092545	chrX	+	983	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	-97	-385	0	0	multi-exon	FALSE	canonical	3	261	junction_4	15.3195136998535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	154367793	False	NA	NA	False	NA	NA	NA	154379427	154381279	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
WTC11_00092547	chrX	+	1921	11	FSM	ENSG00000102125.16	ENST00000601016.6	1906	11	-15	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	40.6546430312701	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	154408976	True	NA	22	True	CATAAA	-26	NA	154411523	154421726	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
WTC11_00092549	chrX	+	2787	3	NIC	ENSG00000102125.16	novel	2286	5	NA	NA	-138	-17	intron_retention	FALSE	canonical	3	132	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAACAGAACCATAAAGC	154415789	False	NA	12	True	NA	NA	NA	154418336	154421683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_154420265_154420657_154420736_154420902
WTC11_00092550	chrX	+	2318	11	FSM	ENSG00000071553.18	ENST00000677342.1	2318	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	215.735972892793	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	154418909	True	NA	16	True	AATAAA	-21	NA	154428632	154436516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154434830_154435051_154435138_154435187_154435273_154435506_154435681
WTC11_00092553	chrX	+	854	4	NIC	ENSG00000165775.18	novel	6297	5	NA	NA	-135	5	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	221.486392860199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTATCTTGGTGTCTA	155026725	False	NA	2	True	AATACA	-22	NA	155027017	155055111	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_155027072_155033402_155033554_155051669_155051802_155054594
WTC11_00092554	chrX	+	1026	1	FSM	ENSG00000277858.2	ENST00000354514.6	591	1	-454	19	-454	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTCAAGGAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	155380254	155381280	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155380300_155381300
WTC11_00092555	chrX	+	1475	9	ISM	ENSG00000182484.15	ENST00000359512.8	1437	10	786	-292	59	0	3prime_fragment	FALSE	canonical	3	44	junction_3	62.1720144035884	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	156021746	156025666	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_156021793_156021998_156022146_156022322_156022460_156022698_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
WTC11_00092558	chrX	-	852	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	-103	102	-46	-102	multi-exon	FALSE	canonical	3	509	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAGATTATCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	1452975	1441693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1442318_1452747
WTC11_00092559	chrX	-	1266	8	NNC	ENSG00000169084.15	novel	2579	7	NA	NA	65	22599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.490804960942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATTGATTGGCAGTTG	NA	False	NA	NA	False	NA	NA	NA	2500895	2196906	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_2196933_2220763_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
WTC11_00092561	chrX	-	1344	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	24	3	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGTGCACCTCTTT	NA	False	NA	0	True	AATAAA	-19	NA	2609183	2566026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2567293_2609105
WTC11_00092562	chrX	-	5145	10	FSM	ENSG00000006756.16	ENST00000381154.6	5145	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	5.24933858267454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCATTTGTTTGTT	NA	False	NA	-1	True	AATAAA	-19	NA	2929339	2903971	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2907633_2908720_2908843_2909816_2909980_2910658_2910794_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
WTC11_00092563	chrX	-	2160	7	FSM	ENSG00000006756.16	ENST00000217890.10	2160	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.54896090146283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCAACGAGGCTGCAGA	NA	False	NA	NA	False	AAGAAA	-9	NA	2929275	2913613	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2914774_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
WTC11_00092565	chrX	-	856	4	FSM	ENSG00000285756.2	ENST00000425492.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.0385699160912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843857	3817527	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3829363_3829393_3843340
WTC11_00092567	chrX	-	3831	3	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	4	231	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	68	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCACCTTATTAATGAC	NA	False	NA	NA	False	AATAAA	-32	NA	3882313	3852502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3854928_3866949_3867807_3881764
WTC11_00092568	chrX	-	4178	5	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	8	231	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	56.139892233598	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCACCTTATTAATGAC	NA	False	NA	NA	False	AATAAA	-32	NA	3882309	3852502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3854928_3860789_3860997_3863501_3863646_3866949_3867807_3881764
WTC11_00092569	chrX	-	8681	10	NNC	ENSG00000285756.2	novel	956	6	NA	NA	0	2284	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	44.680208008181	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAATGAAGGTTAGTAT	NA	False	NA	NA	False	CATAAA	-39	NA	3920746	3858514	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3860702_3860789_3860997_3863501_3863646_3863788_3865143_3866949_3867807_3893115_3893352_3899215_3899423_3901927_3902072_3903440_3906233_3920193
WTC11_00092572	chrX	-	843	7	NIC	ENSG00000006757.12	novel	2752	7	NA	NA	27	1389	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	50.6940715359192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7927712	7900659	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
WTC11_00092573	chrX	-	652	6	FSM	ENSG00000006757.12	ENST00000442940.1	652	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	55.4710735428836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCGCAGGACAAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	7927739	7902048	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
WTC11_00092574	chrX	-	1665	8	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	164	-65	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	47.2587320513579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCTGACTTGGATTC	NA	False	NA	-8	True	AATAAA	-17	NA	9766025	9725410	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9759331_9759427_9760716_9760827_9765567
WTC11_00092575	chrX	-	6168	11	NNC	ENSG00000101871.17	novel	6092	11	NA	NA	-17	34134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.510988903406	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAATCATTTGATCTC	NA	False	NA	NA	False	NA	NA	NA	10620559	10411175	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_10411204_10445557_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
WTC11_00092576	chrX	-	741	2	NNC	ENSG00000101871.17	novel	6168	10	NA	NA	1	-16900	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCACATTCCATTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	10620584	10583581	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_10584028_10620289
WTC11_00092577	chrX	-	5248	13	FSM	ENSG00000047648.23	ENST00000337414.9	5336	13	86	2	86	1	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTTTGTTTCCTGGCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11665834	11137545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_11139531_11142232_11142314_11143979_11144249_11156528_11156627_11169504_11169685_11178099_11178249_11179301_11179453_11182062_11182119_11186235_11186432_11188727_11188985_11196924_11196997_11254547_11254708_11664240
WTC11_00092580	chrX	-	3938	1	NIC	ENSG00000181544.15	novel	3040	11	NA	NA	29106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGAGATCCTATTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	14839898	14835960	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_14836000_14839900
WTC11_00092583	chrX	-	1323	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	29	0	29	0	multi-exon	FALSE	canonical	1	6	junction_5	4.84148737476408	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15664776	15627317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
WTC11_00092584	chrX	-	894	5	FSM	ENSG00000238178.7	ENST00000454712.7	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	1.11803398874989	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	NA	False	NA	2	True	ATTAAA	-21	NA	16167603	16153199	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206
WTC11_00092587	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	238.146770495677	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	16869886	16844653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
WTC11_00092589	chrX	-	4045	14	NNC	ENSG00000102098.19	novel	4162	15	NA	NA	307	0	intron_retention	FALSE	canonical	2	2	junction_13	43.1983179598027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354381	18239312	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_18241380_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354249
WTC11_00092590	chrX	-	1334	4	FSM	ENSG00000102098.19	ENST00000398048.4	1334	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	42.7577153531643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTCAAAGCCTCAGAT	NA	False	NA	-8	True	AATAAA	-14	NA	18246755	18239317	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18239954_18241012_18241380_18242438_18242591_18246576
WTC11_00092591	chrX	-	3414	19	NNC	ENSG00000147010.18	novel	4728	18	NA	NA	0	78557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.403918520289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGATTGCACCATT	NA	False	NA	NA	False	NA	NA	NA	19887600	19455419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_19455542_19535412_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
WTC11_00092592	chrX	-	6180	13	NIC	ENSG00000173681.17	novel	6682	12	NA	NA	1	11	intron_retention	FALSE	canonical	3	13	junction_1	10.2902326936221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCATCCTATCCATTA	NA	False	NA	8	True	AATAAA	-29	NA	19991060	19912848	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_19914427_19914938_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223_19970299_19990907
WTC11_00092593	chrX	-	3453	13	NNC	ENSG00000173681.17	novel	6682	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	13.440196757819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTTACTTGCCAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	19991060	19916257	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223_19970299_19987978_19988149_19990907
WTC11_00092595	chrX	-	3160	11	ISM	ENSG00000184368.16	ENST00000379651.7	3930	16	72376	154	-18579	-154	3prime_fragment	FALSE	canonical	2	7	junction_3	3.26190128606002	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGACTTGCTAGCGTTTT	NA	False	NA	-1	True	AATACA	-17	NA	20044522	20006866	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363
WTC11_00092596	chrX	-	2659	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	23	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_21	18.0341072677111	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	False	NA	NA	False	NA	NA	NA	20267077	20154931	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
WTC11_00092597	chrX	-	2473	2	Antisense	novelGene_ENSG00000174028.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATTTCTTAAGGAC	NA	False	NA	NA	False	NA	NA	NA	23078386	23075585	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_23076341_23076668
WTC11_00092598	chrX	-	3542	16	NNC	ENSG00000123130.17	novel	4318	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.2906611408142	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCCTTAAATTATT	NA	False	NA	-1	True	AGTAAA	-20	NA	23743250	23701054	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_23701825_23702547_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
WTC11_00092601	chrX	-	1039	8	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-25	0	intron_retention	FALSE	canonical	3	31	junction_7	111.970294894563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907963	23833352	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23907693
WTC11_00092602	chrX	-	6458	3	FSM	ENSG00000174010.10	ENST00000685367.1	6488	3	28	2	-10	1	multi-exon	FALSE	canonical	3	29	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTATCTCTGATTA	NA	False	NA	NA	False	AATAAA	-22	NA	24025289	23983717	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23989031_24005988_24006701_24024856
WTC11_00092603	chrX	-	1412	2	FSM	ENSG00000169297.8	ENST00000378970.5	1813	2	137	264	137	-264	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGCAGAGTATTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30309253	30304469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30304824_30308195
WTC11_00092604	chrX	-	6682	11	FSM	ENSG00000157625.16	ENST00000288422.4	6647	11	-35	0	-35	0	multi-exon	FALSE	canonical	2	9	junction_3	4.12431812546026	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGCG	NA	False	NA	-1	True	AATAAA	-21	NA	30889289	30827441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30831576_30834050_30834153_30842965_30843050_30846550_30846645_30852777_30852939_30854115_30855563_30859486_30859679_30867114_30867219_30867464_30867550_30871698_30871802_30889113
WTC11_00092605	chrX	-	4110	4	NNC	ENSG00000147027.4	novel	4040	3	NA	NA	-45	4464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.3954282560494	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGAAATCTGACTGGTT	NA	False	NA	NA	False	NA	NA	NA	34657330	34622610	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_34622637_34627075_34630492_34639246_34639388_34656803
WTC11_00092606	chrX	-	6672	14	NIC	ENSG00000183337.18	novel	6910	15	NA	NA	189	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	39.3898734470868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40097769	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40097214
WTC11_00092607	chrX	-	6303	15	NIC	ENSG00000183337.18	novel	6258	15	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	39.0355672458347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40098409	40051245	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40098175
WTC11_00092608	chrX	-	554	2	Genic_Genomic	ENSG00000183337.18	novel	288	2	NA	NA	9	-66685	multi-exon	FALSE	canonical	3	22	junction_1	0	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146620	40144528	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_40144907_40146444
WTC11_00092609	chrX	-	6447	31	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_30	81.7526078415171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	40735755	40649542	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
WTC11_00092610	chrX	-	6323	30	NNC	ENSG00000180182.11	novel	7996	31	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_29	96.3283623281473	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	40735899	40649542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735857
WTC11_00092611	chrX	-	6480	31	NNC	ENSG00000180182.11	novel	7996	31	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_30	82.6454004904219	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	40735924	40649542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735857
WTC11_00092612	chrX	-	4106	30	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	68	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	97.3872835458142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACCAACTCTCTAGTTAA	NA	False	NA	-18	True	AATAAA	-26	NA	40735230	40649543	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40649673_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
WTC11_00092613	chrX	-	2859	19	NNC	ENSG00000147044.23	novel	6048	26	NA	NA	17522	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_18	68.3473562847248	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTGAAATGTGTTT	NA	False	NA	-24	True	TATAAA	-31	NA	41648244	41519548	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41648188
WTC11_00092614	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	11	junction_9	4.23782770691181	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	NA	False	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
WTC11_00092615	chrX	-	379	1	FSM	ENSG00000214282.3	ENST00000414254.1	1442	1	526	537	526	-537	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAAAGACTGAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	45633207	45632828	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45632800_45633200
WTC11_00092616	chrX	-	272	1	FSM	ENSG00000207870.1	ENST00000385135.1	110	1	52	-214	52	214	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCTCCCTGCCTCAA	NA	False	NA	NA	False	AGTAAA	-29	NA	45746214	45745942	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45745900_45746200
WTC11_00092617	chrX	-	1007	1	FSM	ENSG00000235587.2	ENST00000425487.2	1006	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTCCTGGACCACCAAC	NA	False	NA	NA	False	NA	NA	NA	46440714	46439707	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46439700_46440700
WTC11_00092618	chrX	-	4006	6	FSM	ENSG00000251192.8	ENST00000683375.1	4040	6	29	5	28	-3	multi-exon	FALSE	canonical	1	2	junction_1	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTACGCATGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	46545392	46497729	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46501336_46528349_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
WTC11_00092621	chrX	-	10325	17	FSM	ENSG00000065923.10	ENST00000616978.5	9971	17	0	-354	0	354	multi-exon	FALSE	canonical	2	24	junction_10	5.4511323364967	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGCTACTCAGGAGGCTG	NA	False	NA	NA	False	AATACA	-36	NA	46759118	46598896	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653715_46662015_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
WTC11_00092622	chrX	-	527	4	FSM	ENSG00000204904.7	ENST00000377879.7	521	4	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATCAGAAGAAAATTTAA	NA	False	NA	-3	True	AATAAA	-20	NA	46899709	46887416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46887693_46890292_46890380_46894523_46894582_46899603
WTC11_00092623	chrX	-	5519	4	NNC	ENSG00000147124.13	novel	613	4	NA	NA	-443	401	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	21.1187120819429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTGTTTT	NA	False	NA	-6	True	NA	NA	NA	47467991	47444776	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47449475_47455920_47456017_47456271_47456415_47467409
WTC11_00092625	chrX	-	627	5	FSM	ENSG00000126756.12	ENST00000485641.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	241.61384480199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	47659107	47651800	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657781_47657864_47658829
WTC11_00092627	chrX	-	3627	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	-40	-1	-29	0	multi-exon	FALSE	canonical	3	17	junction_6	14.8483070490283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48004018	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
WTC11_00092628	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	14.3721953785773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
WTC11_00092629	chrX	-	3640	7	NNC	ENSG00000147118.12	novel	3586	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	15.3911951741536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988660_48002594_48002654_48003507_48003703_48003903
WTC11_00092630	chrX	-	3876	6	NNC	ENSG00000147118.12	novel	3586	7	NA	NA	-35	0	intron_retention	FALSE	canonical	3	19	junction_4	13.8361844451424	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48004024	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988660_48002594_48002654_48003507
WTC11_00092632	chrX	-	1894	16	NNC	ENSG00000017483.16	novel	1990	17	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	62.178953209444	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469423	48458543	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460761_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
WTC11_00092634	chrX	-	575	2	FSM	ENSG00000224292.1	ENST00000445586.1	653	2	0	78	0	-78	multi-exon	FALSE	canonical	1	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCATTCTAGGTTGTG	NA	False	NA	NA	False	AATAAA	-5	NA	48508838	48506600	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48507056_48508718
WTC11_00092635	chrX	-	1324	1	FSM	ENSG00000233585.2	ENST00000419045.1	978	1	0	-346	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATCTCCTGGCTGAGT	NA	False	NA	-3	True	AATAAA	-23	NA	48776970	48775646	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48775600_48777000
WTC11_00092636	chrX	-	708	5	NIC	ENSG00000126768.12	novel	964	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	430.419853166649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897756	48893446	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
WTC11_00092637	chrX	-	1530	6	FSM	ENSG00000126768.12	ENST00000466995.5	1528	6	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_4	462.825496272623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897771	48893446	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894226_48895037_48895102_48895351_48895973_48896758_48896859_48897723
WTC11_00092638	chrX	-	811	6	ISM	ENSG00000126768.12	ENST00000376582.7	950	7	384	0	3	0	3prime_fragment	FALSE	canonical	3	916	junction_4	55.5676164685872	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897759	48893446	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723
WTC11_00092642	chrX	-	1609	11	FSM	ENSG00000196998.19	ENST00000376372.9	1598	11	-11	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	25.8087194568037	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGCTTGACCTCAGGG	NA	False	NA	-16	True	AATAAA	-16	NA	49079898	49074441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
WTC11_00092647	chrX	-	654	1	FSM	ENSG00000230216.1	ENST00000448722.1	546	1	-10	-98	-10	98	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTCTTTTGATAGGT	NA	False	NA	NA	False	NA	NA	NA	49234511	49233857	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49233900_49234500
WTC11_00092656	chrX	-	4779	26	NIC	ENSG00000126012.13	novel	5245	26	NA	NA	0	-239	combination_of_known_junctions	FALSE	canonical	3	69	junction_22	38.0126294802135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGAGCTGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	53225198	53193167	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217275_53217795_53217967_53218275_53218399_53220838_53220917_53224739
WTC11_00092658	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53281584	53266327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53267065_53279563_53279660_53281495
WTC11_00092659	chrX	-	836	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	-1	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53281594	53266327	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53267065_53281495
WTC11_00092668	chrX	-	5667	23	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	6	414	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.2745363193147	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGCTTGTTTTCACG	NA	False	NA	NA	False	AATATA	-3	NA	54044467	53936261	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
WTC11_00092669	chrX	-	11175	23	FSM	ENSG00000196632.11	ENST00000375169.7	11172	23	0	-3	0	3	multi-exon	FALSE	canonical	1	1	junction_22	8.56863394032595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTAAAACTGGTTCTT	NA	False	NA	-7	True	ATTAAA	-25	NA	54358005	54192819	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54198654_54201990_54202194_54232808_54233021_54236937_54237552_54238341_54238473_54239008_54239100_54248696_54249635_54249993_54250132_54251398_54251451_54251531_54251688_54253958_54254076_54255739_54255888_54259273_54259339_54292887_54293038_54293133_54293328_54294552_54294848_54298174_54298395_54301770_54301860_54307921_54308080_54309094_54309316_54311118_54311292_54333136_54333793_54357685
WTC11_00092670	chrX	-	5328	23	NNC	ENSG00000196632.11	novel	715	2	NA	NA	16	-29546	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	8.30077662402642	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGGACAGTTCATGT	NA	False	NA	NA	False	AATAAA	-31	NA	54357989	54227869	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_54228159_54228713_54228744_54232808_54233021_54236937_54237552_54238341_54238473_54239008_54239100_54248696_54249635_54249993_54250132_54251398_54251451_54251531_54251688_54253958_54254076_54255739_54255888_54259273_54259339_54292887_54293038_54293133_54293328_54294552_54294848_54298174_54298395_54301770_54301860_54307921_54308080_54309094_54309316_54311118_54311292_54333136_54333793_54357798
WTC11_00092672	chrX	-	3249	1	ISM	ENSG00000247746.5	ENST00000500968.4	4643	3	1984	0	953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCAGTTATTTGCT	NA	False	NA	0	True	AATAAA	-18	NA	55487864	55484615	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_55484600_55487900
WTC11_00092673	chrX	-	336	1	FSM	ENSG00000237748.1	ENST00000421129.1	336	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTAGTTGAAGTCTGTG	NA	False	NA	NA	False	AAGAAA	-29	NA	56737577	56737241	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56737200_56737600
WTC11_00092677	chrX	-	1195	2	NIC	ENSG00000186787.10	novel	1261	2	NA	NA	9	0	intron_retention	FALSE	canonical	2	21	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121537	57119681	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_57120632_57121292
WTC11_00092678	chrX	-	1357	2	NNC	ENSG00000186787.10	novel	1258	2	NA	NA	6	0	intron_retention	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	NA	False	NA	-3	True	AATACA	-17	NA	57121485	57119682	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_57120635_57121080
WTC11_00092680	chrX	-	4299	1	Genic_Genomic	ENSG00000184675.11	novel	NA	NA	NA	NA	16297	4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTCTTGTGGTTTGT	NA	False	NA	2	True	AATAAA	-36	NA	64189411	64185112	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_64185100_64189400
WTC11_00092681	chrX	-	2660	14	FSM	ENSG00000102043.16	ENST00000374852.4	2660	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.8007829622255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGGTATGCTTAGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	64395452	64268080	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64269044_64270946_64271074_64328771_64328901_64331556_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
WTC11_00092683	chrX	-	2877	5	FSM	ENSG00000126970.16	ENST00000337990.2	2363	5	-140	-374	-140	-201	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAATGGCTTGATGATG	NA	False	NA	NA	False	AAGAAA	-13	NA	65034853	64916007	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_65034628
WTC11_00092684	chrX	-	1957	12	FSM	ENSG00000001497.18	ENST00000677969.1	1957	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	237.622034763106	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAGTTTGACTATGA	NA	False	NA	NA	False	NA	NA	NA	65534754	65499117	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65499160_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00092685	chrX	-	2493	15	NNC	ENSG00000001497.18	novel	2470	14	NA	NA	0	-2122	intron_retention	FALSE	non_canonical	0	0	junction_1	282.723606646318	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGCTGAGCAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	65534787	65501239	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_65501265_65512583_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00092686	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	248.988835091054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	65534798	65520466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00092687	chrX	-	2324	12	FSM	ENSG00000001497.18	ENST00000678823.1	2324	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	310.782536710104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACACAGAACTTGGC	NA	False	NA	NA	False	NA	NA	NA	65534798	65520494	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
WTC11_00092688	chrX	-	809	1	FSM	ENSG00000217835.3	ENST00000456392.1	908	1	173	-74	173	74	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAACTACTAAAAGGAAAA	NA	False	NA	NA	False	AAAAAG	-27	NA	65957023	65956214	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65956200_65957000
WTC11_00092689	chrX	-	4616	7	NNC	ENSG00000131080.15	novel	3455	7	NA	NA	0	1252	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	14.762000767737	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATGATTACTGATCTC	NA	False	NA	-4	True	AATAAA	-15	NA	66639078	66594384	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_66598094_66599473_66599861_66602723_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
WTC11_00092691	chrX	-	4400	7	NNC	ENSG00000131080.15	novel	3464	7	NA	NA	26	1252	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	25.0826411864638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATGATTACTGATCTC	NA	False	NA	-4	True	AATAAA	-15	NA	66639272	66594384	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_66598094_66599768_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
WTC11_00092692	chrX	-	3114	7	NNC	ENSG00000131080.15	novel	3455	7	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	24.2670329642684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	NA	False	NA	-35	True	AATAAA	-19	NA	66639032	66595636	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_66598094_66599768_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
WTC11_00092693	chrX	-	3447	7	NIC	ENSG00000131080.15	novel	3464	7	NA	NA	26	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	24.0791518861349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTTTATTCCTCTAC	NA	False	NA	-37	True	AATAAA	-17	NA	66639272	66595638	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_66598094_66599473_66599867_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
WTC11_00092694	chrX	-	1432	1	FSM	ENSG00000260118.1	ENST00000561973.1	1432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCTAATGTATTTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	68014901	68013469	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68013500_68014900
WTC11_00092695	chrX	-	7558	25	FSM	ENSG00000079482.14	ENST00000355520.6	7569	25	0	11	0	-11	multi-exon	TRUE	canonical	1	2	junction_10	2.47171499166065	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATATAAGTGGCCTCC	NA	False	NA	-26	True	AATAAA	-12	NA	68433495	68042354	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68047164_68048415_68048458_68052539_68052591_68053644_68053811_68063853_68064178_68073151_68073300_68096869_68097030_68111853_68111960_68113180_68113240_68119247_68119333_68192918_68192994_68193889_68193953_68194464_68194499_68197185_68197265_68201618_68201711_68206572_68206674_68210152_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
WTC11_00092698	chrX	-	3202	1	FSM	ENSG00000181191.12	ENST00000374583.1	2692	1	-511	1	-511	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGAATTTTTTGGTTT	NA	False	NA	-26	True	ATTAAA	-25	NA	69164056	69160854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69160900_69164100
WTC11_00092700	chrX	-	1018	8	NNC	ENSG00000120509.11	novel	991	7	NA	NA	0	10935	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	142.406718484023	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGAAGGCTATGGGCACA	NA	False	NA	NA	False	NA	NA	NA	70289927	70275659	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70275688_70286595_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
WTC11_00092701	chrX	-	2236	13	NNC	ENSG00000165349.12	novel	2239	12	NA	NA	0	21599	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	141.196351660453	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATGTGGTGTTGCATG	NA	False	NA	NA	False	NA	NA	NA	70931096	70903979	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70904005_70925582_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
WTC11_00092702	chrX	-	1788	7	NNC	ENSG00000147130.14	novel	1841	7	NA	NA	-120	2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_6	35.0079356083097	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCTCTCCTTCCCCA	NA	False	NA	2	True	AATAAA	-20	NA	71254695	71249198	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254658
WTC11_00092704	chrX	-	958	9	NNC	ENSG00000198034.11	novel	1474	7	NA	NA	0	20291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5364.72751958336	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGGGAGGCAGAAGAG	NA	False	NA	NA	False	AAAAAG	-2	NA	72277248	72235387	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72235412_72250736_72250758_72272602_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
WTC11_00092706	chrX	-	1229	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	14	-12	14	0	multi-exon	FALSE	canonical	3	15	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGGTGTTCTTCATTGA	NA	False	NA	2	True	AATAAA	-31	NA	72306973	72301637	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72302245_72302809_72302935_72306476
WTC11_00092707	chrX	-	842	3	FSM	ENSG00000125931.11	ENST00000373619.7	886	3	40	4	3	-1	multi-exon	FALSE	canonical	1	1	junction_2	8.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACGGGCCAACTAGAGG	NA	False	NA	-11	True	AATAAA	-42	NA	72307147	72301650	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72302245_72302809_72302935_72307024
WTC11_00092708	chrX	-	1887	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	-22	0	0	multi-exon	FALSE	canonical	1	1	junction_1	71.3022897873948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572865	72329515	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00092710	chrX	-	2143	6	FSM	ENSG00000230590.12	ENST00000657611.1	2143	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.357083056362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTATATCAAAGAGATAT	NA	False	NA	NA	False	AAGAAA	-6	NA	74292601	74068088	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74069585_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
WTC11_00092711	chrX	-	3807	1	FSM	ENSG00000271533.1	ENST00000604070.1	3685	1	54	-176	54	176	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAAGAGGAAGTGTGTA	NA	False	NA	NA	False	TATAAA	-29	NA	74213606	74209799	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74209800_74213600
WTC11_00092712	chrX	-	3402	6	FSM	ENSG00000230590.12	ENST00000656041.1	3400	6	0	-2	0	2	multi-exon	FALSE	canonical	2	5	junction_1	13.8072444752746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAAGATGCAACTTCAA	NA	False	NA	NA	False	AATAAA	-22	NA	74292516	74245083	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
WTC11_00092713	chrX	-	6830	1	NIC	ENSG00000230590.12	novel	1578	4	NA	NA	-3415	-10387	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTATTTCAATGTTACA	NA	False	NA	NA	False	NA	NA	NA	74264938	74258108	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_74258100_74264900
WTC11_00092714	chrX	-	8614	1	Genic_Genomic	ENSG00000230590.12	novel	NA	NA	NA	NA	285	8593	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACTAGATTT	NA	False	NA	NA	False	ACTAAA	-39	NA	74274280	74265666	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_74265700_74274300
WTC11_00092715	chrX	-	2234	15	FSM	ENSG00000131269.19	ENST00000339447.8	2234	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.2795563642118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTATAATCCTTCTT	NA	False	NA	-10	True	ATTAAA	-16	NA	75156279	75053281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114832_75156104
WTC11_00092716	chrX	-	1092	3	ISM	ENSG00000102383.14	ENST00000541184.1	6012	11	225	81884	225	51177	5prime_fragment	FALSE	canonical	3	11	junction_2	15.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCATGCCTCATTTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	75523277	75450314	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_75450923_75478890_75478986_75522888
WTC11_00092717	chrX	-	7825	1	FSM	ENSG00000215105.4	ENST00000399586.2	6081	1	-118	-1626	-118	1626	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCCAAAACATTCTCTG	NA	False	NA	NA	False	NA	NA	NA	75747029	75739204	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75739200_75747000
WTC11_00092718	chrX	-	332	1	FSM	ENSG00000235447.2	ENST00000435991.2	1062	1	681	49	681	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGCAAATGTCTGTGT	NA	False	NA	NA	False	AAAACA	-13	NA	76655878	76655546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_76655500_76655900
WTC11_00092719	chrX	-	11029	34	NIC	ENSG00000085224.23	novel	11165	35	NA	NA	7	0	intron_retention	FALSE	canonical	3	8	junction_29	70.3971809478153	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77786197	77504879	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688925_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
WTC11_00092720	chrX	-	4560	14	NIC	ENSG00000085224.23	novel	5847	18	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_11	60.2962116230752	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTTATTGTATTT	NA	False	NA	-31	True	AATAAA	-15	NA	77600499	77505712	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77595711_77595786_77599410_77599581_77599731_77599821_77600433
WTC11_00092721	chrX	-	10449	35	NIC	ENSG00000085224.23	novel	10455	36	NA	NA	8	0	intron_retention	FALSE	canonical	1	4	junction_34	71.6762473143352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTTATTGTATTT	NA	False	NA	-31	True	AATAAA	-15	NA	77786196	77505712	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785844
WTC11_00092722	chrX	-	2966	2	FSM	ENSG00000085224.23	ENST00000493470.2	2967	2	0	1	0	-1	multi-exon	FALSE	canonical	3	108	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTCAAGCATTTAA	NA	False	NA	-1	True	AATAAA	-16	NA	77682141	77673954	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77676299_77681519
WTC11_00092724	chrX	-	3313	11	NNC	ENSG00000102158.22	novel	4506	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895435	77826363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_77828033_77828608_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
WTC11_00092725	chrX	-	13277	29	ISM	ENSG00000165288.11	ENST00000373275.5	12921	41	77991	-23	2259	23	3prime_fragment	TRUE	canonical	3	23	junction_26	10.6481290873667	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTACGTTTAATTTATAAA	NA	False	NA	4	True	AATGAA	-24	NA	80731886	80669479	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915
WTC11_00092727	chrX	-	5351	8	ISM	ENSG00000165259.14	ENST00000506585.6	6158	10	33464	0	587	0	3prime_fragment	FALSE	canonical	3	20	junction_6	6.3342283649701	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84468989	84317877	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471
WTC11_00092728	chrX	-	3205	3	FSM	ENSG00000184788.14	ENST00000647304.1	3707	3	0	502	0	-502	multi-exon	FALSE	canonical	3	3	junction_1	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAACCAAAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	85243870	85209277	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85212078_85224204_85224327_85243587
WTC11_00092729	chrX	-	1709	1	FSM	ENSG00000225536.2	ENST00000394563.4	1624	1	322	-407	322	407	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCAAGGTTATTAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	86086017	86084308	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_86084300_86086000
WTC11_00092730	chrX	-	5976	2	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTCTGGTATTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	87687608	87681590	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_87682998_87683039
WTC11_00092731	chrX	-	5572	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGTCAGCGAAGGGAG	NA	False	NA	NA	False	AATAAA	-41	NA	87687608	87682036	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_87682000_87687600
WTC11_00092732	chrX	-	1183	2	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	172	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATATACAATAAAACAGTA	NA	False	NA	NA	False	NA	NA	NA	90778811	90772842	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_90773773_90778558
WTC11_00092733	chrX	-	1297	3	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAACTCTGTGAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	91779169	91772233	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_91773288_91776581_91776756_91779100
WTC11_00092734	chrX	-	5752	2	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2073	intron_retention	FALSE	canonical	3	256	junction_1	0	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACACTGGTGCAAGAA	NA	False	NA	NA	False	CATAAA	-34	NA	92105541	92098202	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92103706_92105292
WTC11_00092735	chrX	-	1886	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-761	965	at_least_one_novel_splicesite	FALSE	canonical	3	256	junction_2	284	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGACAAGCTGGAAAGA	NA	False	NA	NA	False	AATAAA	-28	NA	92105529	92099310	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92103446_92103706_92105292
WTC11_00092736	chrX	-	1759	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-763	965	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	351	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGACAAGCTGGAAAGA	NA	False	NA	NA	False	AATAAA	-28	NA	92105531	92099310	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92103446_92103577_92105292
WTC11_00092738	chrX	-	1015	1	FSM	ENSG00000234322.1	ENST00000456632.1	1027	1	286	-274	286	274	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAATTCTTATATTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	93288473	93287458	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93287500_93288500
WTC11_00092739	chrX	-	544	3	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	20	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAAATCTCGGATATG	NA	False	NA	-6	True	ATTAAA	-9	NA	94702035	94620034	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94620436_94697895_94698010_94702006
WTC11_00092740	chrX	-	2958	3	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACCTGTCTTAGAGAC	NA	False	NA	NA	False	AATAAA	-14	NA	94698792	94683514	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94686334_94697895_94698010_94698767
WTC11_00092742	chrX	-	5838	5	FSM	ENSG00000165194.15	ENST00000255531.8	7937	5	2097	2	15	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTGAGTGTTTGGTGGA	NA	False	NA	-3	True	ATTAAA	-16	NA	100406500	100291647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100296876_100341902_100342076_100350645_100350705_100402523_100402852_100406450
WTC11_00092743	chrX	-	2415	18	ISM	ENSG00000010671.17	ENST00000308731.8	2575	19	10907	0	10864	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.0256232808331	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTATCTCTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	101375284	101349449	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_101349957_101353193_101353352_101353869_101353989_101354629_101354695_101356051_101356269_101356783_101356956_101357508_101357584_101358309_101358438_101358616_101358697_101359292_101359348_101360087_101360151_101360567_101360756_101362172_101362241_101362560_101362690_101369997_101370080_101371632_101371702_101374535_101374635_101375143
WTC11_00092745	chrX	-	1934	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	0	-6	0	-2	multi-exon	FALSE	canonical	2	3	junction_1	57.8638248150105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATGGTCCTTGTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	101618001	101615119	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
WTC11_00092747	chrX	-	2818	6	NIC	ENSG00000184867.14	novel	612	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	107.138415146016	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659836	101655280	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
WTC11_00092748	chrX	-	3330	6	FSM	ENSG00000166432.16	ENST00000651725.2	3327	6	-27	24	-23	-24	multi-exon	TRUE	canonical	0	0	junction_2	3.09838667696593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAAAGTGTTTTAATT	NA	False	NA	-25	True	AAAAAG	-37	NA	101932054	101882313	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101884822_101886631_101886732_101897867_101898043_101898118_101898221_101904223_101904331_101931716
WTC11_00092749	chrX	-	1106	3	NIC	ENSG00000204071.11	novel	1104	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	12	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATACGGTTATCAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	102142505	102140475	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_102141356_102141713_102141787_102142352
WTC11_00092750	chrX	-	4677	1	FSM	ENSG00000172476.4	ENST00000372633.1	3126	1	-30	-1521	-30	901	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTGAATACTTGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	103502905	103498228	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103498200_103502900
WTC11_00092751	chrX	-	1851	5	NIC	ENSG00000123562.18	novel	849	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_2	714.165378256325	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	NA	False	NA	-2	True	AATAAA	-27	NA	103686684	103675495	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
WTC11_00092752	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	70	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103685170_103685261_103687988
WTC11_00092753	chrX	-	940	4	NNC	ENSG00000288597.1	novel	2186	12	NA	NA	1453	5222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.327586084861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGCAAGAGATAAT	NA	False	NA	NA	False	NA	NA	NA	103767162	103701811	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103701837_103761195_103761539_103764961_103765155_103766783
WTC11_00092754	chrX	-	7149	8	NNC	ENSG00000089682.17	novel	7005	8	NA	NA	-459	-4	intron_retention	FALSE	canonical	3	6	junction_7	24.4156189554881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGGAGAGACGGTCA	NA	False	NA	NA	False	AATAAA	-23	NA	107119282	107061888	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765_107118903_107119142
WTC11_00092756	chrX	-	3632	6	ISM	ENSG00000089682.17	ENST00000495517.5	3315	8	19	19534	0	2602	5prime_fragment	FALSE	canonical	0	0	junction_1	28.5475042692001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTGCTTTTTGAATC	NA	False	NA	2	True	NA	NA	NA	107118804	107085833	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
WTC11_00092757	chrX	-	688	6	FSM	ENSG00000198088.10	ENST00000432145.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	9.72419662491457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAATGAATTGTGCAT	NA	False	NA	NA	False	AATAGA	-29	NA	107154234	107124147	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107124333_107147742_107147810_107150855_107150968_107153171_107153307_107153453_107153504_107154095
WTC11_00092760	chrX	-	2237	4	NNC	ENSG00000170925.3	novel	1248	3	NA	NA	-28	3025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATGAAGTGAATTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	107982398	107977838	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_107979350_107981413_107981560_107981668_107982160_107982309
WTC11_00092761	chrX	-	6692	45	FSM	ENSG00000197565.17	ENST00000334504.12	6685	45	0	-7	0	0	multi-exon	TRUE	canonical	2	15	junction_42	8.68633866130276	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGATGTTCCTTTAT	NA	False	NA	-14	True	AATAAA	-24	NA	108438422	108155606	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
WTC11_00092762	chrX	-	5036	2	NNC	ENSG00000133124.12	novel	6563	2	NA	NA	10950	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	NA	False	NA	-1	True	AATAAA	-18	NA	108725459	108719945	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_108722524_108723001
WTC11_00092763	chrX	-	6853	1	FSM	ENSG00000133124.12	ENST00000564206.2	16461	1	9611	-3	9611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	NA	False	NA	-1	True	AATAAA	-18	NA	108726798	108719945	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108719900_108726800
WTC11_00092765	chrX	-	273	1	ISM	ENSG00000133136.5	ENST00000372054.3	1276	3	93500	497	93500	-497	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGCTGTAATATACAAAA	NA	False	NA	NA	False	NA	NA	NA	110346872	110346599	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_110346600_110346900
WTC11_00092766	chrX	-	3870	1	FSM	ENSG00000225031.1	ENST00000432307.1	1813	1	-28	-2029	-28	2029	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAGAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	111621517	111617647	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111617600_111621500
WTC11_00092767	chrX	-	7001	11	FSM	ENSG00000126016.17	ENST00000371962.5	2720	11	-642	-3639	-594	4	multi-exon	FALSE	canonical	2	5	junction_9	2.16564078277077	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGAAAATGCTTTGGT	NA	False	NA	-7	True	AATAAA	-25	NA	112823178	112774872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112822254
WTC11_00092768	chrX	-	7613	14	FSM	ENSG00000126016.17	ENST00000371959.9	7613	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	3.45555037618711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGTGTGGAAAATGCTT	NA	False	NA	-11	True	AATAAA	-21	NA	112840831	112774876	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112822254_112823189_112825071_112825221_112832293_112832371_112840451
WTC11_00092769	chrX	-	344398	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	41	3122	41	-3122	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAATCACTTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	113991935	113619421	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_113963600_113991715
WTC11_00092772	chrX	-	3538	2	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATATAGCATGGTT	NA	False	NA	86	True	AGTAAA	-21	NA	116817862	116809634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116812938_116817627
WTC11_00092773	chrX	-	8231	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATATAGCATGGTT	NA	False	NA	86	True	AGTAAA	-21	NA	116817865	116809634	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116809600_116817900
WTC11_00092775	chrX	-	2609	11	FSM	ENSG00000125354.24	ENST00000360156.11	2609	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	87.7704392150341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTGATCTGATCTT	NA	False	NA	-4	True	AATAAA	-19	NA	119693370	119615723	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119616743_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
WTC11_00092776	chrX	-	439	5	NNC	ENSG00000198918.8	novel	390	3	NA	NA	0	78499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5194.45603504352	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTGCTGGGTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	119791630	119708004	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119708030_119760795_119760820_119786503_119786733_119789907_119790012_119791573
WTC11_00092777	chrX	-	1413	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	-19	0	0	multi-exon	FALSE	canonical	2	7	junction_6	59.0591599584688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTTCTTTGGGTTATT	NA	False	NA	-1	True	AATAAA	-24	NA	119943604	119925050	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
WTC11_00092778	chrX	-	3338	9	FSM	ENSG00000125355.16	ENST00000371369.9	3350	9	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_1	1.53602571593056	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGTGTCAAGGTAGC	NA	False	NA	1	True	AATAAA	-19	NA	120311449	120258649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120261029_120268243_120268388_120276884_120277048_120285126_120285216_120287153_120287223_120291250_120291341_120293988_120294052_120304348_120304492_120311251
WTC11_00092779	chrX	-	23716	22	FSM	ENSG00000158290.19	ENST00000680673.1	24020	22	304	0	-1	0	multi-exon	FALSE	non_canonical	1	1	junction_20	49.5235805855514	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATGCTCATAAATTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	120575525	120505919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120574550_120574631_120575405
WTC11_00092782	chrX	-	5686	39	NNC	ENSG00000125676.20	novel	5600	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.9746211997631	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTGTATATTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	123733043	123600560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_123601339_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619518_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640525_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
WTC11_00092783	chrX	-	5605	39	NNC	ENSG00000125676.20	novel	5600	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.7448260455523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTGTATATTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	123733043	123600560	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_123601339_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640525_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
WTC11_00092784	chrX	-	5468	37	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	53.2045319707092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATATTATTGTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	123733043	123600568	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123601339_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
WTC11_00092786	chrX	-	326	2	FSM	ENSG00000232412.1	ENST00000426367.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCGTTTCTGTTCCATT	NA	False	NA	-3	True	CATAAA	-19	NA	123961341	123959232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_123959406_123961188
WTC11_00092788	chrX	-	6568	3	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	29.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAAGCCTCAGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	125394202	125382046	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385912_125386838_125389301_125393961
WTC11_00092789	chrX	-	8113	3	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_2	12	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCAGCCTCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	125394150	125384575	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125392902_125393961
WTC11_00092790	chrX	-	2686	2	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCAGCCTCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	125394199	125384575	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125387024_125393961
WTC11_00092791	chrX	-	3336	2	FSM	ENSG00000198889.5	ENST00000371126.3	3345	2	0	9	0	-9	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATAATATAGAATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	126552814	126549391	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126551108_126551194
WTC11_00092792	chrX	-	4167	24	NIC	ENSG00000102038.16	novel	3989	25	NA	NA	-68	100	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	135.256697768041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGATCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	129523568	129446400	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447234_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
WTC11_00092794	chrX	-	4145	9	FSM	ENSG00000102034.18	ENST00000335997.11	4145	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATAAAGGTGCTGCA	NA	False	NA	35	True	ATTAAA	-7	NA	130110716	130064873	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130067526_130069299_130069678_130071039_130071233_130071335_130071420_130072225_130072418_130074048_130074142_130074580_130074753_130081255_130081540_130110619
WTC11_00092795	chrX	-	4674	20	NNC	ENSG00000056277.16	novel	4638	19	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_5	17.8896277536296	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	NA	False	NA	-6	True	AATAAA	-20	NA	130268883	130202706	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130210083_130210136_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
WTC11_00092796	chrX	-	3963	14	FSM	ENSG00000165675.19	ENST00000370935.5	3963	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	14.9278342932386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACTCCTTACCAT	NA	False	NA	NA	False	AATAAA	-7	NA	130903234	130623368	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130901683_130901732_130903048
WTC11_00092798	chrX	-	4594	20	FSM	ENSG00000147255.19	ENST00000370903.8	4476	20	-117	-1	6	1	multi-exon	FALSE	canonical	2	5	junction_10	36.1753194818261	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTGGTCTTCTATT	NA	False	NA	-1	True	AATAAA	-30	NA	131289423	131273504	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279191_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
WTC11_00092803	chrX	-	4447	4	NIC	ENSG00000147255.19	novel	5413	27	NA	NA	-224	-75025	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGGGGTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	131579123	131361168	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131364927_131368951_131369053_131389016_131389149_131578667
WTC11_00092804	chrX	-	5506	12	FSM	ENSG00000213468.7	ENST00000649541.1	5506	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	56.9073482161288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTACTGTTGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	131830604	131688778	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156_131785259_131793993_131794116_131794323_131794467_131825221_131825366_131830291
WTC11_00092807	chrX	-	11260	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	0	3	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.32992949004287	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTGTTTCAGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	132413608	132369319	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
WTC11_00092808	chrX	-	3784	2	ISM	ENSG00000171004.19	ENST00000370836.6	4441	4	3889	-7	9	6	3prime_fragment	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAATCTCATAATTTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	132957506	132626008	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_132629094_132956807
WTC11_00092809	chrX	-	2336	9	FSM	ENSG00000147257.16	ENST00000394299.7	2336	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	145.360543133273	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133985594	133535744	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133704204_133704274_133753481_133754177_133953049_133953212_133985274
WTC11_00092813	chrX	-	3623	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-33	8	intron_retention	FALSE	canonical	3	38	junction_9	40.8849635797023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTCTGTCCTTTGTT	NA	False	NA	-9	True	AATAAA	-33	NA	134797265	134769557	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
WTC11_00092815	chrX	-	3564	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	38	junction_9	38.4447655734822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134797217	134769565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
WTC11_00092816	chrX	-	4209	8	NNC	ENSG00000186376.15	novel	5611	7	NA	NA	65	-8	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	7.62915995589639	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATCACTCAGAAATGG	NA	False	NA	NA	False	AATAAA	-13	NA	135344022	135285799	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135341767_135341955_135343260
WTC11_00092819	chrX	-	1927	9	NNC	ENSG00000147274.14	novel	2012	9	NA	NA	0	10403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1636.14705558516	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTCCTCACAAGAACC	NA	False	NA	NA	False	AATAAA	-31	NA	136880722	136858783	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_136858817_136873460_136874453_136875085_136875169_136875257_136875384_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
WTC11_00092820	chrX	-	3526	11	NIC	ENSG00000147274.14	novel	2012	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	787	junction_2	1156.64705506909	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	NA	False	NA	-16	True	AATAAA	-13	NA	136880722	136869193	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
WTC11_00092821	chrX	-	304	3	FSM	ENSG00000224765.2	ENST00000456631.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	137563925	137556190	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_137556305_137561043_137561198_137563889
WTC11_00092822	chrX	-	953	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	-169	0	-56	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	141177185	141175748	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_141176409_141176892
WTC11_00092823	chrX	-	2439	6	NIC	ENSG00000269556.9	novel	2720	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	73.7547286619644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631719	149596555	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149611286_149611464_149631542
WTC11_00092826	chrX	-	1351	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	73.1688970806585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938458	149932196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
WTC11_00092828	chrX	-	4799	12	NIC	ENSG00000102181.21	novel	4935	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	10.2811711073614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	NA	False	NA	-26	True	AATAAA	-16	NA	150898601	150766335	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150828305_150829605_150831230_150831294_150898521
WTC11_00092829	chrX	-	3596	12	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	9.91117576065916	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	NA	False	NA	-26	True	AATAAA	-16	NA	150898634	150766335	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150828305_150828369_150831230_150831294_150898521
WTC11_00092831	chrX	-	2746	4	FSM	ENSG00000102287.19	ENST00000483564.5	2747	4	0	1	0	-1	multi-exon	TRUE	canonical	2	4	junction_3	6.34209919681348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAAGGTGTGGCTGGTT	NA	False	NA	-13	True	AATAAA	-14	NA	151956470	151953125	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_151955085_151955367_151955568_151955707_151955861_151956036
WTC11_00092833	chrX	-	1514	5	ISM	ENSG00000011677.13	ENST00000370314.9	3669	10	41	88736	41	-3912	5prime_fragment	FALSE	canonical	3	45	junction_1	5.53962995154008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCAGTGCAATAAGATT	NA	False	NA	NA	False	AATAAA	-10	NA	152451274	152254969	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
WTC11_00092834	chrX	-	1179	5	NNC	ENSG00000268902.4	novel	789	5	NA	NA	290	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	40.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714259	152708260	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_152708641_152708798_152709001_152709460_152709576_152713255_152713316_152713837
WTC11_00092835	chrX	-	603	4	NIC	ENSG00000268902.4	novel	789	5	NA	NA	3	-7	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	50.7630661888039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAATGATGTGTGTGTC	NA	False	NA	NA	False	AATAAA	-11	NA	152714546	152708270	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_152708641_152709460_152709576_152713255_152713316_152714488
WTC11_00092836	chrX	-	2008	6	FSM	ENSG00000268606.6	ENST00000623806.3	2025	6	16	1	10	-1	multi-exon	FALSE	canonical	3	31	junction_5	62.3326559677991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753868	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753312_152753392_152753787
WTC11_00092837	chrX	-	2286	9	NIC	ENSG00000130822.16	novel	1564	11	NA	NA	47	0	intron_retention	FALSE	canonical	3	12	junction_8	6.67902500369627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153686741	153669732	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671673_153671879_153672201_153672565_153673079_153686500
WTC11_00092839	chrX	-	4463	7	NIC	ENSG00000067840.13	novel	3761	8	NA	NA	-772	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_5	19.2151560551098	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	NA	False	NA	-5	True	AATAAA	-27	NA	153831337	153802165	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153808341_153808596_153830238
WTC11_00092840	chrX	-	324	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATTTAATTCTCCTTT	NA	False	NA	1	True	AATAAA	-26	NA	153844810	153841255	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_153841480_153844710
WTC11_00092843	chrX	-	8858	26	NIC	ENSG00000172534.14	novel	8876	26	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	111.725377600615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAATAACCACTAGGTGT	NA	False	NA	-13	True	ATTAAA	-10	NA	153971806	153947565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952162_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
WTC11_00092844	chrX	-	8249	47	NNC	ENSG00000196924.19	novel	8240	47	NA	NA	0	45146	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	542.804521955022	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCAGGGTGGCATGC	NA	False	NA	NA	False	NA	NA	NA	154371222	154303377	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154303412_154348530_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
WTC11_00092848	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	6.5121550400237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154409254	154401235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
WTC11_00092849	chrX	-	2667	8	FSM	ENSG00000013563.14	ENST00000393638.5	2665	8	0	-2	0	0	multi-exon	FALSE	canonical	2	2	junction_7	25.0069378128453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154412090	154401235	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154411890
WTC11_00092850	chrX	-	2252	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	-3	0	0	multi-exon	FALSE	canonical	3	22	junction_8	17.5779513880315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	154412112	154401757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
WTC11_00092851	chrX	-	1842	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	120	-250	0	250	multi-exon	TRUE	canonical	3	38	junction_9	20.418461750262	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCAGTGCAGGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	154516116	154505908	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
WTC11_00092852	chrX	-	1913	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	-12	0	0	multi-exon	FALSE	canonical	2	10	junction_8	33.4313374094973	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516242	154506158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
WTC11_00092853	chrX	-	1816	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	-1	0	0	multi-exon	FALSE	canonical	2	10	junction_8	34.0293990543471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516242	154506158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
WTC11_00092854	chrX	-	1716	9	NIC	ENSG00000071889.17	novel	1712	10	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	35.5808937493144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAGATGCTGTTGTC	NA	False	NA	-7	True	AATAAA	-22	NA	154516217	154506166	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508653_154512822_154512937_154515759_154515813_154515909
WTC11_00092860	chrX	-	3277	3	FSM	ENSG00000160219.12	ENST00000475685.1	298	3	60	-3039	60	-2	multi-exon	FALSE	canonical	2	4	junction_2	0.5	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGACTTAAGTTCTTT	NA	False	NA	-6	True	AATAAA	-16	NA	154696032	154675250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154678295_154680131_154680249_154695916
WTC11_00092861	chrX	-	1641	8	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	28.8394570981197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805498	154778683	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154805271
WTC11_00092862	chrX	-	1207	1	FSM	ENSG00000229237.2	ENST00000413805.2	303	1	-109	-795	-109	795	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTACATGATCAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	154817510	154816303	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154816300_154817500
WTC11_00092863	chrX	-	1738	2	Genic_Genomic	ENSG00000277150.2	novel	1707	1	NA	NA	0	40187	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGATAACTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	155458620	155416726	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_155416758_155456913
WTC11_00092864	chrX	-	1707	1	FSM	ENSG00000277150.2	ENST00000622749.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	NA	False	NA	NA	False	GATAAA	-20	NA	155458620	155456913	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155456900_155458600
WTC11_00092865	chrX	-	686	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	-57	31737	18	-1	5prime_fragment	FALSE	canonical	3	109	junction_1	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATACTTAATAGTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	155612934	155524271	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_155524633_155545095_155545278_155612791
WTC11_00092866	chrX	-	1039	2	FSM	ENSG00000185203.12	ENST00000399966.9	1054	2	15	0	15	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	156016822	156014622	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_156015501_156016661
WTC11_00092867	chrX	+	2518	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGACTTTGCAAATGTT	NA	False	NA	2	True	AATAAA	-21	NA	2664079	2666597	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_2664100_2666600
WTC11_00092868	chrX	+	5504	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGATGTTTCTTTCCTC	2888897	False	NA	NA	False	AAAAAG	-4	NA	2888916	2894420	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_2888900_2894400
WTC11_00092869	chrX	+	472	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAGAGAGTGAGTTGAG	NA	False	NA	NA	False	AATAGA	-18	NA	3554674	3555146	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_3554700_3555100
WTC11_00092873	chrX	+	336	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCCCCCAACTCCCTG	NA	False	NA	NA	False	ATTAAA	-32	NA	30617839	30618175	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_30617800_30618200
WTC11_00092878	chrX	+	209	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAGTTGGCACCAGAG	92275870	False	NA	NA	False	CATAAA	-8	NA	92275885	92276094	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_92275900_92276100
WTC11_00092880	chrX	+	5338	1	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGACTTTCATTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	94565896	94571234	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94565900_94571200
WTC11_00092882	chrX	+	521	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAACTCCTTGGCTGAT	94699578	False	NA	NA	False	TATAAA	-24	NA	94699588	94700109	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94699600_94700100
WTC11_00092883	chrX	+	3140	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTGAGCCACCGTGCTC	NA	False	NA	NA	False	NA	NA	NA	101341466	101344606	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_101341500_101344600
WTC11_00092886	chrX	+	3439	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	112532878	112536317	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_112532900_112536300
WTC11_00092887	chrX	+	5473	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGTCTCTTCACAC	114420686	True	NA	86	True	AATAAA	-26	NA	114467026	114472499	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114467000_114472500
WTC11_00092892	chrX	+	1952	1	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACACTTAGGGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	130413699	130415651	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_130413700_130415700
WTC11_00092894	chrX	+	1521	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTTCCTAGCTCAGC	NA	False	NA	NA	False	AAAACA	-43	NA	134893273	134894794	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_134893300_134894800
WTC11_00092896	chrX	+	2541	3	NNC	ENSG00000226179.6	novel	428	2	NA	NA	-1781	487	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	318795	True	NA	NA	False	NA	NA	NA	319208	322338	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_321401_321542_321683_322129
WTC11_00092898	chrX	+	3221	11	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	74	-7	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	76.1551705401544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACAGCCATGTGGCCT	2826477	False	NA	21	True	ATTAAA	-6	NA	2829003	2882810	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
WTC11_00092901	chrX	+	1813	1	FSM	ENSG00000282306.1	ENST00000633785.1	778	1	-1435	400	-1435	-400	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGACTTGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	9403518	9405331	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9403500_9405300
WTC11_00092903	chrX	+	2234	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	14	junction_1	20.3401627875055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	11759503	False	NA	-10	True	AATAAA	-4	NA	11759599	11775736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
WTC11_00092904	chrX	+	2972	2	NNC	ENSG00000176896.8	novel	2607	5	NA	NA	1345	-28	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGACAAATAAAAGTAATTAA	13660776	False	NA	-21	True	ACTAAA	-6	NA	13661031	13665381	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_13661123_13662500
WTC11_00092905	chrX	+	4163	23	FSM	ENSG00000046651.16	ENST00000683284.1	5598	23	-3	1438	0	60	multi-exon	FALSE	canonical	2	7	junction_2	36.3098750313656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAAGTATAAGC	13732861	True	NA	67	True	TATAAA	-36	NA	13734742	13769417	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736655_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
WTC11_00092907	chrX	+	2401	5	NIC	ENSG00000186312.10	novel	843	4	NA	NA	-14	1440	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	49.8923841883709	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTTTAATAAAAATACCAA	15674652	True	NA	NA	False	CATAAA	-9	NA	15674958	15699191	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675025_15675689_15675779_15688660_15688859_15692962_15693059_15697239
WTC11_00092908	chrX	+	1823	11	NIC	ENSG00000169249.14	novel	1479	11	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	46.0609378975287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	NA	False	NA	18	True	AATAAA	-18	NA	15790128	15823260	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15790537_15790933_15791014_15799882_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
WTC11_00092909	chrX	+	1779	3	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	42.5	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGCTTTAACTGTTTC	16576791	False	NA	9	True	AATAAA	-12	NA	16577135	16583989	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567_16581717_16582509
WTC11_00092910	chrX	+	7771	18	FSM	ENSG00000169891.18	ENST00000303843.7	7771	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	3.48501488084674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTTTTATGGAGTCT	16946717	False	NA	7	True	AATAAA	-15	NA	16946861	17153272	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16947135_17006220_17006345_17022122_17022272_17025061_17025186_17029525_17029624_17047346_17047483_17052381_17052446_17054807_17054951_17062437_17062533_17068401_17068472_17069939_17069994_17074113_17074160_17077270_17077408_17103717_17103780_17133823_17133908_17135260_17135407_17138855_17138962_17147412
WTC11_00092911	chrX	+	3443	1	ISM	ENSG00000188158.17	ENST00000676302.1	9044	9	357352	0	7402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGGTTTCTCTCTTCAC	NA	False	NA	6	True	AATAAA	-17	NA	17732551	17735994	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_17732600_17736000
WTC11_00092912	chrX	+	474	2	NNC	ENSG00000286724.1	novel	2723	3	NA	NA	-19	-66008	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGTTTCCAGAGAGCCC	18984230	True	NA	NA	False	NA	NA	NA	18984271	18986871	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_18984654_18986779
WTC11_00092913	chrX	+	681	2	FSM	ENSG00000174028.6	ENST00000312214.5	681	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAATGTGGAGAGAA	23075681	False	NA	NA	False	NA	NA	NA	23075757	23076767	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23076340_23076668
WTC11_00092914	chrX	+	3804	2	ISM	ENSG00000165186.12	ENST00000379361.5	12883	3	-753	22111	-753	-10845	5prime_fragment	FALSE	canonical	2	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCAAATTAATTTTA	23334084	True	NA	11	True	AATAAA	-16	NA	23334095	23382263	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_23335227_23379590
WTC11_00092915	chrX	+	974	7	NNC	ENSG00000130066.17	novel	1135	7	NA	NA	81	83455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	238.548853603524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCCAGGTGCGGTGGC	23783267	False	NA	NA	False	AAAAAG	-26	NA	23783277	23869665	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685_23786210_23869634
WTC11_00092918	chrX	+	5448	37	NNC	ENSG00000101868.13	novel	5487	37	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	34.7968531286138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	24689525	True	NA	17	True	AATAAA	-17	NA	24693961	24996986	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716460_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
WTC11_00092919	chrX	+	1447	1	FSM	ENSG00000236683.3	ENST00000415560.1	1062	1	207	-592	207	592	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTATATCCTTTTCTGG	NA	False	NA	NA	False	ATTAAA	-3	NA	26748235	26749682	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_26748200_26749700
WTC11_00092920	chrX	+	772	2	FSM	ENSG00000099399.6	ENST00000378988.5	1607	2	37	798	37	-798	multi-exon	FALSE	canonical	2	2	junction_1	0	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCAGTCTTTGGGGAACC	30215544	False	NA	NA	False	NA	NA	NA	30215599	30219291	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30215656_30218575
WTC11_00092922	chrX	+	1889	3	FSM	ENSG00000165175.17	ENST00000378474.3	1889	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	205.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAACTAAATTGGACA	38798203	True	NA	-74	True	AATAAA	-9	NA	38801453	38806433	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38801488_38804309_38804414_38804682
WTC11_00092923	chrX	+	12675	45	NNC	ENSG00000124486.14	novel	12543	45	NA	NA	-121	-4	at_least_one_novel_splicesite	FALSE	canonical	3	277	junction_13	206.564473506157	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTCGGTTTTCCCTTT	41082067	True	NA	NA	False	AATAAA	-12	NA	41085323	41236575	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152932_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229780_41230500_41230597_41232386
WTC11_00092927	chrX	+	642	1	FSM	ENSG00000214016.3	ENST00000412542.1	878	1	305	-69	305	69	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	AATAAA	-15	NA	44741391	44742033	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44741400_44742000
WTC11_00092928	chrX	+	628	2	ISM	ENSG00000147050.17	ENST00000621147.5	2595	16	-400	204503	-36	-146740	5prime_fragment	FALSE	canonical	3	44	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCTGCGAGTCGGAGC	44872479	True	NA	NA	False	NA	NA	NA	44873151	44873990	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_44873713_44873923
WTC11_00092929	chrX	+	5211	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66915	0	intron_retention	FALSE	canonical	3	33	junction_12	66.7080324340394	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	44948892	True	NA	20	True	AATATA	-36	NA	44951150	45112542	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
WTC11_00092930	chrX	+	2388	6	NIC	ENSG00000147121.16	novel	1354	6	NA	NA	-74	-7	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	24.7983870443221	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTAT	NA	False	NA	9	True	AATAAA	-9	NA	46447217	46474632	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472752
WTC11_00092931	chrX	+	1324	3	Fusion	ENSG00000147119.4_ENSG00000230844.3	novel	672	3	NA	NA	8	385	multi-exon	FALSE	canonical	3	22	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGTAGCTGCGACTAC	46544819	True	NA	NA	False	NA	NA	NA	46545518	46598881	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_46545628_46563258_46563352_46597759
WTC11_00092934	chrX	+	945	1	FSM	ENSG00000224975.1	ENST00000456273.1	945	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGTTGGGTGAATGC	47204905	False	NA	NA	False	AATAAA	-1	NA	47204920	47205865	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47204900_47205900
WTC11_00092935	chrX	+	601	3	FSM	ENSG00000102225.17	ENST00000522883.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGGGCCCACTCAG	47217454	False	NA	NA	False	NA	NA	NA	47218310	47223728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47218665_47222272_47222343_47223551
WTC11_00092937	chrX	+	1746	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	30.9448434045696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	48507831	True	NA	4	True	AATAAA	-5	NA	48508996	48520796	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00092938	chrX	+	1919	14	NNC	ENSG00000102312.24	novel	2079	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	35.2750813031911	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAGGCTTCTTCTTCACT	48507864	True	NA	13	True	AATAAA	-14	NA	48509029	48520805	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48509104_48509423_48509550_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
WTC11_00092939	chrX	+	476	4	FSM	ENSG00000094631.21	ENST00000438518.5	610	4	134	0	134	0	multi-exon	FALSE	canonical	1	2	junction_1	54.5221667458903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGGCAAAATGAAGAA	48801463	False	NA	NA	False	AAAAAG	-43	NA	48801529	48802930	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48801752_48801873_48801945_48802662_48802786_48802870
WTC11_00092940	chrX	+	4179	29	FSM	ENSG00000094631.21	ENST00000376619.6	4179	29	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	34.8990526741203	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800473	True	NA	28	True	AATAAA	-19	NA	48802033	48824976	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802171_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
WTC11_00092944	chrX	+	1266	1	FSM	ENSG00000187682.2	ENST00000338270.1	1266	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTCAAGAAATTCAGG	48828817	False	NA	NA	False	NA	NA	NA	48828872	48830138	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48828900_48830100
WTC11_00092950	chrX	+	2618	14	FSM	ENSG00000154545.17	ENST00000599522.7	2618	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	461.048213987758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184875	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185870_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190344_52190393_52190993_52191109_52191430_52191862_52192056
WTC11_00092951	chrX	+	2547	13	NIC	ENSG00000154545.17	novel	2537	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	167	junction_12	305.664883219079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184889	52192268	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
WTC11_00092953	chrX	+	838	3	FSM	ENSG00000232593.7	ENST00000366185.2	1063	3	28	197	-4	-197	multi-exon	FALSE	canonical	1	2	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGTTGGCCAGGCCG	53093062	True	NA	NA	False	NA	NA	NA	53094184	53142510	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53094285_53094399_53094475_53141847
WTC11_00092954	chrX	+	4188	2	ISM	ENSG00000232593.7	ENST00000603385.2	4343	4	5267	0	5226	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTATTTTCTTTTTTGTA	53099213	False	NA	15	True	ATTAAA	-23	NA	53099414	53170914	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_53099609_53166920
WTC11_00092955	chrX	+	1393	8	FSM	ENSG00000158423.17	ENST00000375327.6	1488	8	48	47	31	-47	multi-exon	FALSE	canonical	1	2	junction_5	4.62027475108464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCACCTTCTAACCTAG	53422817	True	NA	-38	True	NA	NA	NA	53422920	53431068	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282_53428628_53429853_53429973_53430395_53430791_53430906
WTC11_00092960	chrX	+	2296	13	NIC	ENSG00000067445.22	novel	2306	13	NA	NA	16	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	126.190635107717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916904	True	NA	NA	False	ATTAAA	-14	NA	54920866	54931431	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920966_54922217_54922292_54922623_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
WTC11_00092962	chrX	+	1115	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	9	6773	-2	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTTTCCCCATTCAA	55907988	True	NA	1	True	AATAAA	-19	NA	55908240	56015173	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_55985998_55986225_56014844
WTC11_00092963	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	56723940	False	NA	10	True	AGTAAA	-20	NA	56729353	56817626	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56729590_56817319
WTC11_00092964	chrX	+	1603	10	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	170	3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	13.2142833309498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCTGTTTTGGGTACA	57286505	True	NA	7	True	AATAAA	-19	NA	57286875	57489196	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
WTC11_00092965	chrX	+	5853	21	FSM	ENSG00000089472.18	ENST00000683049.1	5829	21	-24	0	-24	0	multi-exon	FALSE	canonical	1	1	junction_17	43.1530995410527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTACTTGTTAGAAC	66162348	True	NA	-7	True	NA	NA	NA	66164192	66267362	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66257444_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00092966	chrX	+	4116	19	NNC	ENSG00000089472.18	novel	4431	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	51.4419545833751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	66162403	True	NA	14	True	ATTAAA	-16	NA	66164247	66267383	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_66164471_66170532_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66258839_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00092967	chrX	+	6775	20	FSM	ENSG00000089472.18	ENST00000682927.1	6751	20	-24	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	43.787828916479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTTAGAACACTGAAAG	66162514	True	NA	1	True	ATTAAA	-3	NA	66164358	66267370	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200573_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66258980_66260099_66260263_66263643_66263689_66266439
WTC11_00092971	chrX	+	4882	15	FSM	ENSG00000130052.14	ENST00000374599.8	4943	15	61	0	58	0	multi-exon	FALSE	canonical	1	2	junction_1	8.57886582104594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAACTGTGTGGCTGTCT	68647630	True	NA	6	True	AATAAA	-18	NA	68647726	68725836	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68647928_68665498_68665533_68712913_68712986_68715293_68715376_68716367_68716432_68717211_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
WTC11_00092972	chrX	+	409	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTAAATCTTTATATAC	NA	False	NA	NA	False	NA	NA	NA	68785264	68785673	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_68785300_68785700
WTC11_00092975	chrX	+	4912	13	NIC	ENSG00000082458.12	novel	4529	12	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	46.8889793969637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCTTTGTCTTAAGT	70455018	False	NA	12	True	AATAAA	-24	NA	70455033	70505490	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_70455264_70455786_70456103_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
WTC11_00092976	chrX	+	6760	46	FSM	ENSG00000184634.17	ENST00000690242.1	6912	46	152	0	-8	0	multi-exon	FALSE	canonical	2	29	junction_41	22.7023248931812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	71115856	True	NA	24	True	AATACA	-18	NA	71118694	71142450	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137781_71137855_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
WTC11_00092977	chrX	+	6827	45	FSM	ENSG00000184634.17	ENST00000692304.1	8628	45	152	1649	-8	4	multi-exon	FALSE	canonical	0	0	junction_39	24.8252986798841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCGAGTTCTGCATGTC	71115856	True	NA	28	True	AATACA	-22	NA	71118694	71142454	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137560_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
WTC11_00092978	chrX	+	1540	2	FSM	ENSG00000169562.13	ENST00000647424.1	1603	2	45	18	-2	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGAGGTGGCTTGTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	71215256	71225197	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71215291_71223691
WTC11_00092979	chrX	+	952	4	NNC	ENSG00000147140.17	novel	3208	11	NA	NA	153	-13388	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1.4142135623731	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTGTGGAC	71254622	False	NA	8	True	AATAAA	-16	NA	71254966	71272786	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_71255001_71264841_71265065_71266534_71266728_71272284
WTC11_00092980	chrX	+	3929	9	FSM	ENSG00000147140.17	ENST00000676495.1	3909	9	-20	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	248.095243807696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242181	True	NA	21	True	ATTAAA	-11	NA	71283589	71301158	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71298509_71298706_71298817_71299941
WTC11_00092981	chrX	+	2694	12	FSM	ENSG00000147140.17	ENST00000678335.1	2674	12	-20	0	0	0	multi-exon	FALSE	canonical	1	53	junction_8	717.331844550771	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242181	True	NA	23	True	ATTAAA	-13	NA	71283589	71301160	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297839_71297939_71298468_71298509_71298706_71298817_71299941
WTC11_00092982	chrX	+	1280	11	FSM	ENSG00000147166.11	ENST00000373829.8	1280	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.60959767013998	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTCATTCTCTCACC	71301736	False	NA	33	True	AATAAA	-21	NA	71301749	71305371	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71301871_71302136_71302187_71302276_71302334_71302410_71302557_71303261_71303357_71303460_71303517_71303626_71303698_71303811_71303912_71304186_71304301_71304541_71304605_71304964
WTC11_00092985	chrX	+	8682	21	NIC	ENSG00000147162.14	novel	5435	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	174	junction_3	50.7670168514952	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	71528758	True	NA	6	True	AATAAA	-19	NA	71533127	71575892	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
WTC11_00092986	chrX	+	3283	6	ISM	ENSG00000204131.10	ENST00000633930.2	13633	8	-27	12725	-27	-696	5prime_fragment	FALSE	canonical	0	0	junction_1	5.60713830755047	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAACCCAGCGTGCTG	71909064	True	NA	NA	False	AAAAAG	-26	NA	71910817	72140561	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_71911368_72132078_72132235_72134090_72134219_72134508_72134705_72137093_72137226_72138440
WTC11_00092987	chrX	+	1730	1	FSM	ENSG00000269911.1	ENST00000602508.1	1490	1	-245	5	-245	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACCTTGCTCATCGACT	NA	False	NA	NA	False	AATAAA	-14	NA	72777362	72779092	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72777400_72779100
WTC11_00092988	chrX	+	359	1	FSM	ENSG00000230311.2	ENST00000427861.2	435	1	233	-157	233	157	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTATTTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	73223356	73223715	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73223400_73223700
WTC11_00092991	chrX	+	1839	6	FSM	ENSG00000225470.8	ENST00000655879.1	1817	6	-22	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	212.620412942878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTCAAACAAAAGATGTG	73937009	True	NA	-97	True	TATAAA	-1	NA	73944310	74000384	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73999354
WTC11_00092993	chrX	+	4641	4	FSM	ENSG00000225470.8	ENST00000668590.1	4628	4	-13	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	252.009259089159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73999354_74000497_74004269
WTC11_00092994	chrX	+	5119	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	-6	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	224.87037932996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007534	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
WTC11_00092997	chrX	+	746	5	FSM	ENSG00000225470.8	ENST00000653929.1	739	5	-7	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	239.366351018684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAAGCTCTATGATGT	73937037	True	NA	-11	True	AATATA	-1	NA	73944338	74004665	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73962734_73962802_73998767_73998845_74004269
WTC11_00092998	chrX	+	1305	1	ISM	ENSG00000225470.8	ENST00000639185.1	9658	6	66851	606	12607	169	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAATGGTGGTGTACA	NA	False	NA	NA	False	TATAAA	-45	NA	74011034	74012339	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_74011000_74012300
WTC11_00093000	chrX	+	4421	10	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	46.6216714298574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85246023_85246929_85247189_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
WTC11_00093002	chrX	+	720	1	FSM	ENSG00000223772.1	ENST00000445417.1	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCACTGGGCACAGGGA	NA	False	NA	NA	False	NA	NA	NA	86304366	86305086	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_86304400_86305100
WTC11_00093004	chrX	+	351	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTAGGAAGGAAAGGAGT	94700575	False	NA	NA	False	NA	NA	NA	94700664	94701015	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94700700_94701000
WTC11_00093006	chrX	+	3717	27	FSM	ENSG00000147202.19	ENST00000373049.8	3730	27	13	0	13	0	multi-exon	TRUE	canonical	0	0	junction_4	142.664298515802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	96684666	False	NA	15	True	AGTAAA	-20	NA	96684724	97469835	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00093008	chrX	+	568	1	FSM	ENSG00000204086.4	ENST00000373040.4	1560	1	291	701	291	-701	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCACCGTGCATATTCT	NA	False	NA	NA	False	NA	NA	NA	96884198	96884766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96884200_96884800
WTC11_00093009	chrX	+	826	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625768	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	238.319953004359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCATTTTGTCTGGTG	97302628	True	NA	14	True	AGTAAA	-19	NA	97310609	97469834	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97315689_97315894_97348080_97348281_97383908_97384045_97429649_97429746_97469693
WTC11_00093010	chrX	+	397	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625792	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	228.702621080059	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTCATTTTGTCTGGT	97302652	True	NA	13	True	AGTAAA	-18	NA	97310633	97469833	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
WTC11_00093011	chrX	+	252	1	FSM	ENSG00000265260.2	ENST00000464966.3	299	1	125	-78	125	78	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTTTTAAATTTTATC	NA	False	NA	NA	False	GATAAA	-7	NA	97341170	97341422	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_97341200_97341400
WTC11_00093013	chrX	+	2402	4	NIC	ENSG00000281566.3	novel	625	4	NA	NA	0	1766	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.8325958557674	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGCCTCTGGCACAAT	98572132	True	NA	58	True	TATAAA	-4	NA	98573874	98893827	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98644527_98644575_98876525_98876903_98891907
WTC11_00093015	chrX	+	4511	14	NIC	ENSG00000101811.14	novel	2570	14	NA	NA	-3	2015	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	82.7630109187152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTTAGAAATCTTCTGT	100815559	True	NA	13	True	AATAAA	-20	NA	100820413	100843535	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
WTC11_00093016	chrX	+	2045	14	NNC	ENSG00000101811.14	novel	2570	14	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	88.7896923491439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTACACTGCAAATTGATA	100815569	True	NA	16	True	AATAAA	-16	NA	100820423	100840921	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837557_100838238_100838365_100840713
WTC11_00093017	chrX	+	5682	22	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-15	81	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	8.33591796652721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCGGCCTGATCTCAGC	101095769	True	NA	91	True	NA	NA	NA	101098172	101166207	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_101098235_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
WTC11_00093018	chrX	+	3872	13	FSM	ENSG00000196440.12	ENST00000452188.6	3872	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.8047700371436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	101483740	True	NA	11	True	ATTAAA	-16	NA	101485432	101533459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101485531_101486022_101486099_101487192_101487273_101487607_101487692_101488007_101488100_101488443_101489316_101498144_101499367_101504936_101505356_101509363_101509428_101509589_101509679_101511024_101511056_101531643_101532013_101533083
WTC11_00093019	chrX	+	2974	5	NIC	ENSG00000125962.16	novel	2899	6	NA	NA	58	0	intron_retention	FALSE	canonical	2	3	junction_1	47.0372193055669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATATTGTCCTAGTTC	102599193	False	NA	11	True	AATAAA	-19	NA	102599225	102604153	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102599267_102599347_102599848_102600919_102601033_102601463_102601510_102601879
WTC11_00093020	chrX	+	2415	6	NNC	ENSG00000271147.8	novel	1848	6	NA	NA	0	1207	intron_retention	FALSE	canonical	1	2	junction_5	47.262670258884	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTATAGTAGAATTAT	102597743	True	NA	NA	False	AATAAA	-15	NA	102599536	102641714	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102640060
WTC11_00093021	chrX	+	927	8	NIC	ENSG00000271147.8	novel	964	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	36.8527129120719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597743	True	NA	3	True	ATTAAA	-17	NA	102599536	102650145	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
WTC11_00093022	chrX	+	5252	5	FSM	ENSG00000198932.13	ENST00000361600.9	5971	5	153	566	36	-557	multi-exon	TRUE	canonical	1	2	junction_3	4.06201920231798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTAATATATGAATAAT	102651345	True	NA	69	True	ATTAAA	-38	NA	102651518	102658517	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102651596_102652174_102652266_102652830_102652899_102653220_102653299_102653579
WTC11_00093023	chrX	+	3697	5	FSM	ENSG00000158301.20	ENST00000486814.2	3576	5	-116	-5	-116	3	multi-exon	FALSE	canonical	0	0	junction_1	34.8523672079817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCCTTCTTCAGTTTAA	102710848	True	NA	16	True	AATAAA	-24	NA	102712328	102717736	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102712553_102713090_102713218_102713781_102713850_102714188_102714267_102714536
WTC11_00093024	chrX	+	7851	14	Fusion	ENSG00000239407.5_ENSG00000223546.8	novel	3692	8	NA	NA	0	10834	multi-exon	FALSE	canonical	3	5	junction_13	11.3705734608419	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTAGCCTGGATCCCTTT	102768175	True	NA	NA	False	AATAAA	-26	NA	102769217	102916992	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102839800_102839973_102845856_102846021_102865041_102865153_102897573_102897765_102900749_102900833_102901022_102901134_102901630_102901772_102905660_102905738_102910828
WTC11_00093026	chrX	+	833	3	NNC	ENSG00000185222.10	novel	1028	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	363	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	NA	False	NA	-5	True	AATAAA	-5	NA	103356430	103358195	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103356607_103357082_103357162_103357617
WTC11_00093028	chrX	+	1733	3	FSM	ENSG00000234405.2	ENST00000658164.1	1271	3	-462	0	-462	0	multi-exon	FALSE	canonical	1	1	junction_2	3	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAAGCAAAGTGCAGA	NA	False	NA	NA	False	NA	NA	NA	103490088	103517919	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103491371_103497434_103497614_103517647
WTC11_00093029	chrX	+	605	1	FSM	ENSG00000279894.1	ENST00000623412.1	2297	1	1617	75	1617	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAAATTTCTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	103598224	103598829	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103598200_103598800
WTC11_00093030	chrX	+	2086	3	FSM	ENSG00000231154.1	ENST00000435306.1	2086	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTTCTTTAATAAGGA	103687060	True	NA	12	True	AATAAA	-24	NA	103687283	103691772	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103687487_103687951_103689481_103691418
WTC11_00093033	chrX	+	271	1	FSM	ENSG00000276298.1	ENST00000617723.1	324	1	120	-67	120	67	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTTTTCTGTATTCTGT	NA	False	NA	NA	False	NA	NA	NA	103909245	103909516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103909200_103909500
WTC11_00093034	chrX	+	3862	10	ISM	ENSG00000133138.20	ENST00000357242.10	5729	21	47208	-7	-3631	7	3prime_fragment	FALSE	canonical	2	9	junction_1	2.36225462505214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAAAGATTAGTATTAT	NA	False	NA	16	True	AATAAA	-30	NA	106849880	106876157	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
WTC11_00093035	chrX	+	318	1	FSM	ENSG00000213569.4	ENST00000399148.3	611	1	20	273	20	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATGGTTGCAAATAA	NA	False	NA	NA	False	AAGAAA	-11	NA	107131678	107131996	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107131700_107132000
WTC11_00093039	chrX	+	4851	25	NIC	ENSG00000188153.14	novel	6427	51	NA	NA	18668	-4	intron_retention	FALSE	canonical	3	17	junction_16	24.8975679312034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTCTGTTGTGTATCT	NA	False	NA	19	True	ATTAAA	-15	NA	108601159	108697541	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108695440_108696296
WTC11_00093041	chrX	+	3929	1	FSM	ENSG00000188153.14	ENST00000644079.1	3915	1	2	-16	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	NA	False	NA	23	True	ATTAAA	-19	NA	108693616	108697545	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108693600_108697500
WTC11_00093042	chrX	+	4807	5	ISM	ENSG00000157600.12	ENST00000372068.7	5570	7	64266	1	2279	-1	3prime_fragment	FALSE	canonical	3	10	junction_4	2.27760839478607	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGAGTCCTGGCCTTG	NA	False	NA	12	True	ATTAAA	-13	NA	110067379	110177787	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
WTC11_00093043	chrX	+	3400	2	FSM	ENSG00000243978.8	ENST00000540313.1	5225	2	1825	0	1825	0	multi-exon	FALSE	canonical	1	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTCATTGTGGC	NA	False	NA	NA	False	AGTAAA	-12	NA	110452389	110456326	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110454665_110455201
WTC11_00093044	chrX	+	2434	1	FSM	ENSG00000225366.5	ENST00000602699.1	2710	1	184	92	184	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAGCAGGCAAGGAAC	NA	False	NA	NA	False	AGTAAA	-42	NA	110520495	110522929	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110520500_110522900
WTC11_00093045	chrX	+	6684	5	ISM	ENSG00000077264.16	ENST00000372007.10	9126	18	-7	98158	-7	-23213	5prime_fragment	FALSE	canonical	2	16	junction_3	4.02336923485777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGCAGTCTTTCTTTG	111095415	True	NA	5	True	AATAAA	-19	NA	111096183	111129203	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076
WTC11_00093046	chrX	+	625	5	FSM	ENSG00000077264.16	ENST00000484442.5	710	5	0	85	0	-85	multi-exon	FALSE	canonical	1	1	junction_4	7.92148975887743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTAGACAGGTAGGTTG	111095556	False	NA	NA	False	NA	NA	NA	111096324	111098701	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111096416_111096542_111096738_111097389_111097457_111097574_111097685_111098539
WTC11_00093047	chrX	+	1222	3	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	37	junction_1	10	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTCGGTATTCCTT	111542841	False	NA	NA	False	AATAAA	-21	NA	111544168	111630988	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111544407_111617660_111617733_111630076
WTC11_00093048	chrX	+	483	5	Antisense	novelGene_ENSG00000236189.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	38.0065783779598	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTCGGTATTCCTT	111544243	False	NA	NA	False	AATAAA	-21	NA	111544254	111630988	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_111544407_111582163_111582227_111617660_111617733_111630076_111630141_111630856
WTC11_00093049	chrX	+	3898	3	ISM	ENSG00000147246.10	ENST00000371950.3	4652	6	147212	-5	147208	5	3prime_fragment	FALSE	canonical	1	5	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCACATGTCTTTTTTC	NA	False	NA	7	True	ATTAAA	-20	NA	114731293	114910066	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_114731608_114848002_114848109_114906588
WTC11_00093052	chrX	+	1316	1	FSM	ENSG00000234785.1	ENST00000434365.1	1310	1	65	-71	65	71	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGGAAAAAAAAACATTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	115702875	115704191	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115702900_115704200
WTC11_00093053	chrX	+	3722	3	NNC	ENSG00000229335.2	novel	444	3	NA	NA	16	-9238	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	38.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCACACATACCCTGTA	115839388	True	NA	74	True	NA	NA	NA	115840935	115897340	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_115841079_115842839_115843178_115894099
WTC11_00093055	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	236.12454340877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	119569140	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
WTC11_00093056	chrX	+	1562	4	NNC	ENSG00000258545.7	novel	1536	3	NA	NA	-9	6388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.5081686262787	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAATCCAACAACCCTG	120139814	True	NA	NA	False	NA	NA	NA	120140700	120153243	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_120140850_120143722_120143901_120145637_120146852_120153222
WTC11_00093057	chrX	+	242	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCTCTTCTTTTAGAG	121049996	False	NA	NA	False	NA	NA	NA	121050098	121050340	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_121050100_121050300
WTC11_00093058	chrX	+	12667	4	Genic_Genomic	ENSG00000280142.1	novel	609	1	NA	NA	-19633	-4	multi-exon	TRUE	canonical	1	1	junction_3	24.7161665492222	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACAACTTATTGCCC	122217708	True	NA	NA	False	AATAAA	-18	NA	122222374	122242612	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_122222603_122227327_122227431_122229771_122229895_122230399
WTC11_00093059	chrX	+	879	4	NNC	ENSG00000125675.20	novel	644	3	NA	NA	-180	-49	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	13.8884444373331	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTAATATTCCAAAT	123183947	False	NA	10	True	AATAAA	-24	NA	123183972	123253653	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_123184215_123184517_123184645_123185831_123185991_123253302
WTC11_00093061	chrX	+	7336	34	NIC	ENSG00000101972.20	novel	5218	35	NA	NA	-764	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	68.7421554085352	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	NA	False	NA	NA	False	AATAAA	-22	NA	123959447	124102656	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
WTC11_00093063	chrX	+	2794	16	NNC	ENSG00000156697.13	novel	2507	15	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	54.8426435864971	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	NA	False	NA	6	True	AATAAA	-17	NA	129906008	129929752	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129912578_129912711_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
WTC11_00093064	chrX	+	7191	14	NNC	ENSG00000085185.16	novel	2221	4	NA	NA	1757	-184	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.27005657609687	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGTTGAGGGGTTTT	129984234	True	NA	NA	False	AATACA	-20	NA	129984391	130057887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_129984430_130005187_130005318_130012577_130012669_130012949_130016214_130020984_130021151_130022896_130022978_130024989_130025380_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
WTC11_00093066	chrX	+	845	8	FSM	ENSG00000102078.16	ENST00000464342.5	734	8	1	-112	0	0	multi-exon	FALSE	canonical	3	20	junction_4	21.6757176281174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTACATTGTGGATTT	130338384	True	NA	NA	False	TTTAAA	-1	NA	130339910	130365675	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540
WTC11_00093067	chrX	+	2158	1	FSM	ENSG00000221930.6	ENST00000592932.1	1624	1	168	-702	-26	702	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTGGATCTTTCAT	NA	False	NA	17	True	NA	NA	NA	130495132	130497290	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130495100_130497300
WTC11_00093068	chrX	+	1642	3	FSM	ENSG00000203952.9	ENST00000517294.5	1790	3	148	0	148	0	multi-exon	FALSE	canonical	0	0	junction_1	9	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTGTGGGTCTTAT	134236722	True	NA	11	True	AATAAA	-27	NA	134237194	134246207	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134237344_134238778_134238841_134244776
WTC11_00093070	chrX	+	1888	4	FSM	ENSG00000156500.16	ENST00000623326.4	2063	4	1	174	-1	-159	multi-exon	TRUE	canonical	2	3	junction_3	5.24933858267454	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTACTACCTGGGTGA	134806823	True	NA	NA	False	NA	NA	NA	134807191	134822816	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134807342_134807539_134807709_134814770_134814850_134821326
WTC11_00093072	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027988	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135032576_135033124
WTC11_00093073	chrX	+	4544	18	NIC	ENSG00000198689.13	novel	4684	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	45.2018158069909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	135983877	True	NA	17	True	ATTAAA	-26	NA	135985430	136047130	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_135985473_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136028885_136028976_136030131_136030163_136033413_136033494_136040075_136040182_136044451
WTC11_00093074	chrX	+	4813	17	FSM	ENSG00000198689.13	ENST00000678163.1	4809	17	-4	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_7	42.4914973112269	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGGTTGGCAAATTTT	135983877	True	NA	NA	False	AATAAA	-26	NA	135985430	136047269	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136028885_136028976_136030131_136030163_136033413_136033494_136040075_136040182_136044451
WTC11_00093076	chrX	+	1437	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	-423	0	-281	0	multi-exon	FALSE	canonical	3	212	junction_1	191.846813890666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	136496797	136502941	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
WTC11_00093077	chrX	+	6066	2	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-259	5226	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAATTTCTGTTTGGT	138711430	True	NA	NA	False	ATTAAA	-12	NA	138711847	138721843	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_138711961_138715890
WTC11_00093079	chrX	+	246	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTTCTTTTCATT	NA	False	NA	-83	True	NA	NA	NA	140033530	140033776	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_140033500_140033800
WTC11_00093081	chrX	+	563	5	ISM	ENSG00000102081.16	ENST00000616382.5	2799	16	28529	978	452	30	3prime_fragment	FALSE	canonical	3	22	junction_4	87.6395316053207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	147940586	True	NA	4	True	AATAAA	-14	NA	147940608	147948534	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948412
WTC11_00093083	chrX	+	204	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCTGGACGCATGGCCT	NA	False	NA	NA	False	NA	NA	NA	150230842	150231046	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_150230800_150231000
WTC11_00093084	chrX	+	1739	4	NNC	ENSG00000147381.12	novel	1773	3	NA	NA	-24	0	intron_retention	TRUE	canonical	0	0	junction_1	40.4502437844597	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151914791	False	NA	16	True	AATAAA	-13	NA	151914858	151925166	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_151914936_151915614_151915638_151923452_151923525_151923599
WTC11_00093086	chrX	+	1588	9	NNC	ENSG00000268089.3	novel	6468	9	NA	NA	9	1417	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	12.0208152801713	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAGACAATGGCTAACT	152637428	True	NA	7	True	AATAAA	-23	NA	152637903	152658959	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152658828
WTC11_00093087	chrX	+	2163	6	NIC	ENSG00000183305.14	novel	576	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	61.250306121684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152714692	152718605	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_152714929_152715078_152715158_152715956_152716077_152716647_152716746_152716895_152716962_152717041
WTC11_00093088	chrX	+	4419	23	NNC	ENSG00000147394.19	novel	4328	23	NA	NA	-16396	0	at_least_one_novel_splicesite	TRUE	canonical	2	14	junction_11	6.2858886956591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCAGTGTTAAAGT	152897336	True	NA	12	True	AATAAA	-13	NA	152898045	152973471	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
WTC11_00093089	chrX	+	4305	23	FSM	ENSG00000147394.19	ENST00000370268.8	4305	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	9.32970462714399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCAGTGTTAAAGT	NA	False	NA	12	True	AATAAA	-13	NA	152914452	152973471	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152922719_152922810_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
WTC11_00093090	chrX	+	2368	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	-15	0	-15	0	multi-exon	FALSE	canonical	1	3	junction_5	3.18157963590287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	153494788	True	NA	8	True	ATTAAA	-19	NA	153494964	153509546	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
WTC11_00093091	chrX	+	2372	4	FSM	ENSG00000130829.18	ENST00000370167.8	2289	4	-87	4	-45	-4	multi-exon	FALSE	canonical	1	2	junction_1	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAGAGAGAGAAGCTA	153642414	True	NA	8	True	AATAAA	-17	NA	153642446	153651322	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153642612_153647918_153648327_153649231_153649688_153649979
WTC11_00093095	chrX	+	437	3	FSM	ENSG00000198753.12	ENST00000455214.1	489	3	0	52	0	24	multi-exon	FALSE	canonical	2	7	junction_2	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCTCGGCCCTGAC	NA	False	NA	NA	False	NA	NA	NA	153775975	153776980	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153776215_153776355_153776460_153776886
WTC11_00093096	chrX	+	322	2	FSM	ENSG00000198753.12	ENST00000448847.1	526	2	11	193	11	-193	multi-exon	FALSE	canonical	2	5	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCAGCAGCTGGCAGG	NA	False	NA	NA	False	CATAAA	-23	NA	153777527	153778108	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153777689_153777947
WTC11_00093097	chrX	+	315	1	FSM	ENSG00000184844.6	ENST00000402289.3	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAATTGGCCACTGCCTT	NA	False	NA	NA	False	AAAAAG	-12	NA	153841250	153841565	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153841200_153841600
WTC11_00093105	chrX	+	270	3	NNC	ENSG00000230578.3	novel	271	2	NA	NA	0	2564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATTTTAAAAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	155348751	155352363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_155348891_155349581_155349675_155352325
WTC11_00093106	chrX	+	1369	8	ISM	ENSG00000182484.15	ENST00000359512.8	1437	10	1096	-290	58	1	3prime_fragment	FALSE	canonical	3	44	junction_2	66.3124945902016	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAGTGTGCTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	156022056	156025664	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_156022146_156022322_156022460_156022698_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
WTC11_00093107	chrX	-	552	4	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCAGGCGGAGCTAAGG	NA	False	NA	NA	False	NA	NA	NA	270385	268843	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_268940_269599_269655_269874_270222_270331
WTC11_00093109	chrX	-	1678	5	Antisense	novelGene_ENSG00000185291.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	2.06155281280883	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCGCTCACCCGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	1383282	1367741	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_1368091_1378040_1378180_1378321_1378477_1378692_1378813_1382367
WTC11_00093111	chrX	-	1317	9	FSM	ENSG00000157399.17	ENST00000684738.1	1317	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.5639752471638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	NA	False	NA	-21	True	NA	NA	NA	2964263	2934831	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
WTC11_00093112	chrX	-	867	6	FSM	ENSG00000157399.17	ENST00000483425.2	1185	6	0	318	0	-318	multi-exon	FALSE	canonical	0	0	junction_3	18.629009635512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACTTGGCTAGTTTAGT	NA	False	NA	NA	False	NA	NA	NA	2964288	2952640	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2952993_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
WTC11_00093113	chrX	-	1544	2	FSM	ENSG00000183943.6	ENST00000496648.1	463	2	0	-1081	0	1081	multi-exon	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	NA	False	NA	-12	True	AATAAA	-22	NA	3612255	3609869	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3611335_3612176
WTC11_00093115	chrX	-	2047	7	NNC	ENSG00000285756.2	novel	3629	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	57.9904206648727	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843771	3817527	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3817779_3818441_3818501_3822373_3822581_3825087_3825232_3826661_3826730_3828505_3829393_3843340
WTC11_00093116	chrX	-	2027	6	NIC	ENSG00000285756.2	novel	1470	5	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_4	63.0472838431601	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843916	3817527	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3817779_3818441_3818501_3818656_3818704_3822373_3822581_3828505_3829393_3843340
WTC11_00093117	chrX	-	3504	5	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	10	1348	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	67.1658395317143	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTACACTACAGTTTCA	NA	False	NA	NA	False	TTTAAA	-39	NA	3882307	3846857	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3848491_3854691_3854928_3860789_3860997_3866921_3867807_3881764
WTC11_00093118	chrX	-	5140	3	NIC	ENSG00000285756.2	novel	3629	13	NA	NA	0	1508	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	72	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTATCATCTATCTAC	NA	False	NA	NA	False	NA	NA	NA	3882317	3851225	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3854928_3866921_3867807_3881764
WTC11_00093119	chrX	-	5490	5	NNC	ENSG00000285756.2	novel	2427	4	NA	NA	0	1787	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	48.602983447521	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTATCATCTATCTAC	NA	False	NA	NA	False	NA	NA	NA	3920746	3889650	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3893352_3899215_3899423_3901927_3902072_3905347_3906233_3920193
WTC11_00093120	chrX	-	6042	10	FSM	ENSG00000101871.17	ENST00000690004.1	3473	10	12	-2581	12	0	multi-exon	FALSE	canonical	3	16	junction_8	48.3982960622416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	NA	False	NA	-1	True	AATAAA	-22	NA	10620573	10445555	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10567001_10567604_10620289
WTC11_00093121	chrX	-	1089	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	-18	0	-17	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTGAAATGCTAATTA	NA	False	NA	NA	False	ATTAAA	-3	NA	11111114	10969872	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
WTC11_00093122	chrX	-	2820	6	NNC	ENSG00000196459.15	novel	2842	6	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_5	40.0019999500025	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGATCGTGGTAGTT	NA	False	NA	-19	True	AATAAA	-7	NA	13734605	13712251	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_13714506_13716003_13716086_13716529_13716679_13719870_13719983_13734043_13734186_13734524
WTC11_00093123	chrX	-	3738	5	FSM	ENSG00000165195.16	ENST00000635045.1	3738	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	10.2713192920871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335523	15319455	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15325153_15325913_15326047_15331215_15331993_15335500
WTC11_00093124	chrX	-	2181	7	NNC	ENSG00000182287.15	novel	1946	6	NA	NA	0	52403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	609.660743546952	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGGGCATGGTGATGT	NA	False	NA	NA	False	NA	NA	NA	15854827	15773402	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15773429_15830060_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00093125	chrX	-	3599	7	NNC	ENSG00000182287.15	novel	2365	6	NA	NA	0	29021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	617.695358211113	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATTTGAAACAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	15854804	15796784	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15796813_15830060_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
WTC11_00093126	chrX	-	3822	19	FSM	ENSG00000047230.15	ENST00000443824.5	4319	19	501	-4	501	0	multi-exon	FALSE	canonical	1	11	junction_18	44.647038252177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16711716	16587998	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16711512
WTC11_00093132	chrX	-	6703	12	FSM	ENSG00000173681.17	ENST00000379687.8	6682	12	-26	5	-26	-5	multi-exon	FALSE	canonical	3	37	junction_7	5.83236906630743	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACAGTGGTAAGAACAT	NA	False	NA	-8	True	AATAAA	-13	NA	19991087	19912864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223_19970299_19990907
WTC11_00093134	chrX	-	724	8	FSM	ENSG00000184831.14	ENST00000439528.5	714	8	0	-10	0	0	multi-exon	FALSE	canonical	3	145	junction_1	66.7162740603055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23880901	23833352	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844
WTC11_00093135	chrX	-	1506	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	-513	-315	-513	315	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTAGTTTGCATATGT	NA	False	NA	NA	False	NA	NA	NA	24789582	24788076	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24788100_24789600
WTC11_00093136	chrX	-	6214	7	FSM	ENSG00000157625.16	ENST00000378930.7	6255	7	42	-1	42	0	multi-exon	FALSE	canonical	2	9	junction_3	2.14087209644419	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGCG	NA	False	NA	-1	True	AATAAA	-21	NA	30859678	30827441	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30831576_30834050_30834153_30842965_30843050_30846550_30846645_30852777_30852939_30854115_30855563_30859486
WTC11_00093137	chrX	-	2692	3	FSM	ENSG00000198947.18	ENST00000681870.1	2689	3	0	-3	0	3	multi-exon	FALSE	canonical	1	4	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCGGAGTACCGGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	31266952	31237708	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31240196_31260954_31261017_31266809
WTC11_00093139	chrX	-	1919	11	NIC	ENSG00000101955.15	novel	1846	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	16.7454471424325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220859	38149338	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_38149895_38153947_38154033_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
WTC11_00093140	chrX	-	349	2	FSM	ENSG00000156313.15	ENST00000470183.1	382	2	3	30	3	-30	multi-exon	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTGTTATTAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	38318987	38317275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38317466_38318828
WTC11_00093141	chrX	-	6755	14	NIC	ENSG00000183337.18	novel	6910	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	37.0924002168389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTACCTTGTGTCCCAT	NA	False	NA	-6	True	AATAAA	-23	NA	40097958	40051249	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40097214
WTC11_00093142	chrX	-	2380	7	FSM	ENSG00000185753.13	ENST00000378421.1	2380	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.6406068093885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAACTTGCTACCAGG	NA	False	NA	0	True	AATAAA	-18	NA	40647521	40629936	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40640321_40647006_40647142_40647304
WTC11_00093143	chrX	-	4557	31	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	13	19	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	84.9724203622694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGAAGATGTTTTCA	NA	False	NA	2	True	AATAAA	-42	NA	40735529	40649523	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40649673_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
WTC11_00093144	chrX	-	230	1	FSM	ENSG00000232801.1	ENST00000419629.1	891	1	652	9	652	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGTTTAAAATTCACG	NA	False	NA	NA	False	NA	NA	NA	40890885	40890655	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40890700_40890900
WTC11_00093145	chrX	-	7483	18	NNC	ENSG00000147044.23	novel	8220	25	NA	NA	17444	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_17	75.0073583472207	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTGTCTCCTCAGATT	NA	False	NA	-3	True	AATAAA	-19	NA	41648322	41514933	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41648188
WTC11_00093146	chrX	-	1034	2	ISM	ENSG00000069535.14	ENST00000378069.5	2570	15	113766	6	113619	-6	3prime_fragment	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATATCTGCTGTCCTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	43768684	43766615	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_43767619_43768653
WTC11_00093147	chrX	-	1192	1	FSM	ENSG00000214018.3	ENST00000426279.1	1163	1	62	-91	62	91	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCATAATGTTCATTAAC	NA	False	NA	NA	False	CATAAA	-42	NA	44310414	44309222	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44309200_44310400
WTC11_00093148	chrX	-	9184	18	NIC	ENSG00000065923.10	novel	9971	17	NA	NA	19	-215	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.5276041826709	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTGTATTTTAAAG	NA	False	NA	0	True	AATAAA	-22	NA	46759099	46599465	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_46606371_46606923_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653715_46662015_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
WTC11_00093149	chrX	-	409	3	FSM	ENSG00000204904.7	ENST00000618037.1	428	3	11	8	11	-8	multi-exon	FALSE	canonical	1	3	junction_1	0.5	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATATGAAAACATATCAG	NA	False	NA	-15	True	AATAAA	-8	NA	46894581	46887428	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46887693_46890292_46890380_46894523
WTC11_00093152	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.91547594742265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	NA	False	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
WTC11_00093153	chrX	-	3631	7	NNC	ENSG00000147118.12	novel	3499	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	14.7808058718807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003985	47974850	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988660_48002594_48002654_48003507_48003703_48003908
WTC11_00093154	chrX	-	3669	5	ISM	ENSG00000147118.12	ENST00000376943.8	3499	6	16	20	5	-19	intron_retention	FALSE	canonical	3	26	junction_3	11.6484977572217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAACATTTAAAAAGCTA	NA	False	NA	-29	True	NA	NA	NA	48003973	47974870	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507
WTC11_00093155	chrX	-	985	5	FSM	ENSG00000221994.12	ENST00000428686.1	988	5	3	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	6	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTTCCTGTTCTGTGC	NA	False	NA	NA	False	AAGAAA	-43	NA	48071631	48059797	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071465
WTC11_00093156	chrX	-	1846	16	NNC	ENSG00000017483.16	novel	1990	17	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_15	57.7066913123792	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48468416	48458543	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468379
WTC11_00093158	chrX	-	985	8	NNC	ENSG00000126768.12	novel	964	7	NA	NA	-4	28511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	466.817448915789	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGGCACAGTGGCTA	NA	False	NA	NA	False	AAAAAG	-14	NA	48897751	48864935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48864968_48893446_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
WTC11_00093159	chrX	-	874	7	NNC	ENSG00000126768.12	novel	950	7	NA	NA	0	28511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	372.717348968655	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGGCACAGTGGCTA	NA	False	NA	NA	False	AAAAAG	-14	NA	48897790	48864935	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48864968_48893446_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723
WTC11_00093162	chrX	-	4118	10	Fusion	ENSG00000068308.15_ENSG00000223309.1	novel	2682	10	NA	NA	-492	-186	multi-exon	FALSE	canonical	3	34	junction_8	114.979654668356	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCGGTGCCACCTCAC	NA	False	NA	NA	False	NA	NA	NA	48959774	48923128	WTC11_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48936190_48936359_48944189_48944284_48956976
WTC11_00093163	chrX	-	904	8	FSM	ENSG00000068400.13	ENST00000619107.1	904	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	103.366003174375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGAGGAGAAGGTGCT	NA	False	NA	NA	False	NA	NA	NA	48983859	48976255	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48982978_48983093_48983227_48983441_48983774
WTC11_00093164	chrX	-	471	6	FSM	ENSG00000068400.13	ENST00000621664.1	471	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	110.027269347194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGGACTGGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	48997307	48989610	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48997249
WTC11_00093165	chrX	-	3480	10	NNC	ENSG00000068323.17	novel	3279	10	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	57.9708313201615	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043565	49028725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039392_49040454_49040569_49043110
WTC11_00093167	chrX	-	2507	13	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	13	-3	intron_retention	FALSE	canonical	3	168	junction_12	289.33375335991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGATGTTTCTTCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	52069159	52061829	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
WTC11_00093168	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	53.1099488482776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
WTC11_00093170	chrX	-	1423	1	FSM	ENSG00000270497.1	ENST00000605804.1	496	1	-121	-806	-121	806	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATAGTAGCGCGAAATG	NA	False	NA	NA	False	NA	NA	NA	53065669	53064246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53064200_53065700
WTC11_00093171	chrX	-	678	1	FSM	ENSG00000231340.1	ENST00000428275.1	1082	1	395	9	395	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCAAATGCCTCTAAATG	NA	False	NA	NA	False	NA	NA	NA	53143518	53142840	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53142800_53143500
WTC11_00093172	chrX	-	2710	4	ISM	ENSG00000124313.18	ENST00000640436.1	570	5	325	-2220	325	0	3prime_fragment	FALSE	canonical	2	14	junction_2	1.4142135623731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCTCTGCCTCCTA	NA	False	NA	-7	True	CATAAA	-15	NA	53239259	53232875	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_53235185_53236321_53236496_53238144_53238307_53239194
WTC11_00093174	chrX	-	1156	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	-2	0	-1	multi-exon	FALSE	canonical	3	644	junction_4	82.3771813064759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGCAGTGTTGTGTGC	NA	False	NA	-4	True	AATAAA	-19	NA	53434367	53431258	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
WTC11_00093175	chrX	-	267	2	FSM	ENSG00000072506.14	ENST00000682365.1	2663	2	-33	2429	-33	-2206	multi-exon	FALSE	canonical	3	644	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCCAGGGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	53434403	53433704	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53433887_53434318
WTC11_00093176	chrX	-	14292	85	NNC	ENSG00000086758.16	novel	14796	83	NA	NA	38	66151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.962528234039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	53684131	53465944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53465973_53532793_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
WTC11_00093177	chrX	-	14345	86	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	19	66151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.034457873347	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	53686700	53465944	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53465971_53532793_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575786_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165_53686369_53686587
WTC11_00093178	chrX	-	15062	85	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_84	197.143841655582	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGCTTGCCTTGTG	NA	False	NA	-1	True	AATAAA	-24	NA	53686700	53532098	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165_53686369_53686587
WTC11_00093179	chrX	-	14865	85	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_84	197.889970272541	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGCTTGCCTTGTG	NA	False	NA	-1	True	AATAAA	-24	NA	53686700	53532098	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551313_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686269_53686369_53686587
WTC11_00093180	chrX	-	5497	21	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	28	junction_9	17.1098655751587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTGCTTGGCATTCT	NA	False	NA	-5	True	GATAAA	-18	NA	54043917	53936680	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
WTC11_00093184	chrX	-	299	1	FSM	ENSG00000256045.3	ENST00000545075.3	1051	1	735	17	735	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAGGGTTTGTTAAGAT	NA	False	NA	-33	True	NA	NA	NA	55181707	55181408	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55181400_55181700
WTC11_00093185	chrX	-	2436	6	FSM	ENSG00000204271.13	ENST00000640577.1	2436	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.5591410854362	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTATGAGTGAGAACATG	NA	False	NA	NA	False	NA	NA	NA	56995542	56973434	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56974899_56977072_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
WTC11_00093189	chrX	-	978	3	NNC	ENSG00000186787.10	novel	725	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121573	57119681	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_57120102_57120404_57120632_57121242
WTC11_00093190	chrX	-	812	3	NIC	ENSG00000186787.10	novel	725	3	NA	NA	20	-13	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTACATGACATGCT	NA	False	NA	-16	True	AATACA	-4	NA	57121471	57119695	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_57120102_57120404_57120632_57121292
WTC11_00093191	chrX	-	931	1	FSM	ENSG00000231831.1	ENST00000413059.1	2764	1	825	1008	825	-1008	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGTCAGTGCTGAAGAT	NA	False	NA	NA	False	AAGAAA	-5	NA	57394584	57393653	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57393700_57394600
WTC11_00093192	chrX	-	1773	3	NIC	ENSG00000235437.9	novel	1978	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGAGCTGCTTCTGTTC	NA	False	NA	-12	True	AATAAA	-10	NA	63561035	63426564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_63428006_63432363_63432492_63560831
WTC11_00093193	chrX	-	4648	11	FSM	ENSG00000131089.17	ENST00000374870.8	4644	11	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.6590160178138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63755089	63634966	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63637309_63638049_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303
WTC11_00093194	chrX	-	2106	11	NIC	ENSG00000131089.17	novel	2179	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	50.6699121767544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATAGATGGACCTTTT	NA	False	NA	-25	True	AATAAA	-14	NA	63755076	63637981	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314_63754677_63754920
WTC11_00093196	chrX	-	990	1	FSM	ENSG00000228328.2	ENST00000426382.2	1248	1	265	-7	265	7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTTAGTTCCTGTGC	NA	False	NA	NA	False	AGTAAA	-44	NA	68071502	68070512	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68070500_68071500
WTC11_00093197	chrX	-	560	7	FSM	ENSG00000079482.14	ENST00000467444.1	737	7	0	177	0	-177	multi-exon	FALSE	canonical	2	3	junction_3	2.13437474581095	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAATTTTACTTTGATA	NA	False	NA	NA	False	NA	NA	NA	68210268	68192918	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68192994_68193889_68193953_68194464_68194499_68197185_68197265_68201618_68201711_68206572_68206674_68210152
WTC11_00093198	chrX	-	964	3	FSM	ENSG00000079482.14	ENST00000680262.1	964	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAAGTGCTGGGATTGC	NA	False	NA	NA	False	NA	NA	NA	68433480	68430584	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68431078_68432866_68433025_68433167
WTC11_00093199	chrX	-	2397	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	-38	-1472	-34	0	multi-exon	FALSE	canonical	3	68	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAATTTTTTGGTTTT	NA	False	NA	-25	True	ATTAAA	-26	NA	69165487	69160853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69163135_69165371
WTC11_00093202	chrX	-	277	2	FSM	ENSG00000204165.6	ENST00000466160.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	NA	False	NA	NA	False	AATAAA	-40	NA	71104448	71103986	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71104113_71104297
WTC11_00093203	chrX	-	5618	26	NNC	ENSG00000147130.14	novel	5536	25	NA	NA	-57	18733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.0802349250667	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAACAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71254197	71220890	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71220916_71239623_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
WTC11_00093205	chrX	-	650	1	FSM	ENSG00000213018.2	ENST00000391782.2	432	1	53	-271	53	271	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCCCATGTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	71420461	71419811	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71419800_71420500
WTC11_00093206	chrX	-	4093	1	FSM	ENSG00000242732.4	ENST00000609883.1	4105	1	-95	107	-22	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATAATTCATTTAAGC	NA	False	NA	NA	False	TTTAAA	-28	NA	72131923	72127830	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72127800_72131900
WTC11_00093207	chrX	-	955	9	NNC	ENSG00000198034.11	novel	1474	7	NA	NA	0	20289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5364.72751958336	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAAGAGGGAGGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	72277248	72235389	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72235412_72250736_72250758_72272603_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
WTC11_00093208	chrX	-	629	3	FSM	ENSG00000198034.11	ENST00000470671.1	610	3	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_1	6146.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTCACGCAGGTCGA	NA	False	NA	NA	False	AGTAAA	-21	NA	72273371	72255659	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72256055_72272678_72272773_72273231
WTC11_00093209	chrX	-	1421	8	NIC	ENSG00000147099.21	novel	1710	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	72.0544012166771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572810	72329515	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00093210	chrX	-	1518	10	FSM	ENSG00000147099.21	ENST00000647654.1	1516	10	0	-2	0	0	multi-exon	FALSE	canonical	1	2	junction_1	66.8028239219767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	NA	False	NA	-12	True	NA	NA	NA	72572843	72329556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
WTC11_00093211	chrX	-	1795	12	FSM	ENSG00000147099.21	ENST00000647886.1	1807	12	12	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.1602777114237	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	NA	False	NA	-12	True	NA	NA	NA	72572847	72329556	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
WTC11_00093218	chrX	-	2237	1	FSM	ENSG00000186288.5	ENST00000373519.1	2237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGGCTCTTAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	73079512	73077275	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73077300_73079500
WTC11_00093219	chrX	-	244	1	FSM	ENSG00000269904.2	ENST00000438453.1	1195	1	-24	975	-24	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACTGAGATCACACAGC	NA	False	NA	NA	False	NA	NA	NA	73526179	73525935	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73525900_73526200
WTC11_00093220	chrX	-	1773	14	FSM	ENSG00000131269.19	ENST00000669388.1	1836	14	0	63	0	-63	multi-exon	FALSE	canonical	1	5	junction_1	59.132986218959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAAATCACTTAACTTT	NA	False	NA	NA	False	NA	NA	NA	75156133	75063078	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75063160_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
WTC11_00093221	chrX	-	263	2	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGGGTGGGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	75329786	75323358	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_75323463_75329627
WTC11_00093222	chrX	-	1228	1	FSM	ENSG00000232186.1	ENST00000432946.1	1228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTAAAAGCTTGA	NA	False	NA	NA	False	ACTAAA	-29	NA	75327999	75326771	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75326800_75328000
WTC11_00093223	chrX	-	1253	4	ISM	ENSG00000102383.14	ENST00000373367.8	5578	12	-375	81889	90	51176	5prime_fragment	FALSE	canonical	3	36	junction_2	7.48331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCATGCCTCATTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	75523412	75450315	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_75450923_75478890_75478986_75505820_75505848_75522888
WTC11_00093228	chrX	-	3373	11	NNC	ENSG00000102158.22	novel	4506	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895435	77826363	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_77828038_77828553_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
WTC11_00093233	chrX	-	920	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	168	27	168	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACTGATTTGCTCAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	83749771	83748851	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83748900_83749800
WTC11_00093234	chrX	-	935	3	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-1	17552	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAATGATTTAAATAT	NA	False	NA	NA	False	AATAAA	-16	NA	85243780	85191223	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_85191844_85224204_85224327_85243587
WTC11_00093235	chrX	-	1031	2	Genic_Genomic	ENSG00000237506.3	novel	861	1	NA	NA	-70	44232	multi-exon	FALSE	non_canonical	0	0	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAATAAAGAAATAT	NA	False	NA	NA	False	AAAAAG	-3	NA	87704273	87659110	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_87659140_87703271
WTC11_00093236	chrX	-	1133	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	766.5	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACACTGGTGCAAGAA	NA	False	NA	NA	False	CATAAA	-34	NA	92105541	92098202	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92098662_92100275_92100701_92105292
WTC11_00093238	chrX	-	1127	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	766.5	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACACTGGTGCAAGAA	NA	False	NA	NA	False	CATAAA	-34	NA	92105541	92098202	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92098662_92100281_92100701_92105292
WTC11_00093239	chrX	-	2796	1	FSM	ENSG00000234130.2	ENST00000441188.2	2796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGACTGGTCCAGTACC	NA	False	NA	NA	False	AATACA	-34	NA	93225015	93222219	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93222200_93225000
WTC11_00093242	chrX	-	2069	9	NNC	ENSG00000000003.15	novel	3768	8	NA	NA	0	82281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.459317787493	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100636689	100544826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_100544853_100628715_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
WTC11_00093243	chrX	-	1755	9	NNC	ENSG00000000003.15	novel	3768	8	NA	NA	0	82281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.459317787493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100636689	100544826	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_100544854_100629030_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
WTC11_00093244	chrX	-	958	1	FSM	ENSG00000233680.4	ENST00000412087.2	955	1	403	-406	403	406	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTTCAGGGTGATGCC	NA	False	NA	NA	False	NA	NA	NA	100888187	100887229	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100887200_100888200
WTC11_00093245	chrX	-	480	1	FSM	ENSG00000270813.2	ENST00000603059.2	565	1	39	46	39	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTCTCTGAGTTGCCA	NA	False	NA	NA	False	AAGAAA	-28	NA	101338250	101337770	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101337800_101338200
WTC11_00093246	chrX	-	1358	8	FSM	ENSG00000102393.14	ENST00000493905.6	1358	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	114.211225725113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407908	101397802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101399743_101399801_101400665_101400758_101401631_101401810_101403810_101403986_101407709
WTC11_00093247	chrX	-	1162	1	FSM	ENSG00000237682.2	ENST00000392722.3	1792	1	556	74	556	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGATTGATCAGTCTG	NA	False	NA	NA	False	AATGAA	-36	NA	101538720	101537558	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101537600_101538700
WTC11_00093248	chrX	-	576	4	NNC	ENSG00000198960.11	novel	846	4	NA	NA	27	-8	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	55.4035698809703	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGGCAGAAAAGAGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101617949	101615133	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_101615468_101616671_101616767_101617502_101617585_101617884
WTC11_00093252	chrX	-	780	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1595	-685	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTAGTCTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	103767020	103750082	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103750433_103764961_103765155_103766783
WTC11_00093253	chrX	-	270	1	FSM	ENSG00000227067.3	ENST00000448050.2	469	1	365	-166	365	166	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATCTGTGTAATCTGA	NA	False	NA	NA	False	NA	NA	NA	103961914	103961644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103961600_103961900
WTC11_00093254	chrX	-	620	1	FSM	ENSG00000235946.1	ENST00000441761.1	496	1	-143	19	-143	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACACCAAAAGCAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	104063180	104062560	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104062600_104063200
WTC11_00093255	chrX	-	3055	2	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44549	-3144	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCATTTGTTTCAACTC	NA	False	NA	88	True	NA	NA	NA	104112439	104102357	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_104105289_104112315
WTC11_00093256	chrX	-	235	1	FSM	ENSG00000224816.1	ENST00000425958.1	899	1	752	-88	752	88	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAAAAATCCAGGTATT	NA	False	NA	NA	False	NA	NA	NA	106466688	106466453	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_106466500_106466700
WTC11_00093257	chrX	-	7167	9	NNC	ENSG00000089682.17	novel	7005	8	NA	NA	-404	-3	intron_retention	FALSE	canonical	0	0	junction_3	28.7315157971173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGGAGAGACGGTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	107119227	107061887	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765_107118903_107119142
WTC11_00093258	chrX	-	2579	8	FSM	ENSG00000089682.17	ENST00000372487.5	2579	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.8370087356908	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	107118800	107064419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107065759_107067555_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
WTC11_00093259	chrX	-	332	3	FSM	ENSG00000089682.17	ENST00000474499.1	332	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTACAGCCACACTTA	NA	False	NA	NA	False	AATAAA	-41	NA	107069277	107066644	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107066816_107067555_107067694_107069254
WTC11_00093262	chrX	-	337	1	FSM	ENSG00000225728.2	ENST00000451535.2	380	1	59	-16	59	16	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGAGAAGAGTTACATTG	NA	False	NA	NA	False	NA	NA	NA	107939583	107939246	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107939200_107939600
WTC11_00093265	chrX	-	16593	1	FSM	ENSG00000133124.12	ENST00000564206.2	16461	1	-132	0	22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCTGTAGAGATTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	108736541	108719948	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108719900_108736500
WTC11_00093266	chrX	-	1931	9	FSM	ENSG00000126016.17	ENST00000371958.1	2462	9	0	531	0	-531	multi-exon	FALSE	canonical	2	5	junction_7	2.27760839478607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATGACAGTAAATAAGGA	NA	False	NA	NA	False	AAGAAA	-34	NA	112822584	112780885	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112822254
WTC11_00093267	chrX	-	9978	3	FSM	ENSG00000289287.1	ENST00000688187.1	1603	3	2	-8377	2	8377	multi-exon	FALSE	canonical	3	12	junction_2	30.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGCCCAGATATCTT	NA	False	NA	-11	True	TTTAAA	-1	NA	114606894	114586028	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_114595599_114604483_114604643_114606645
WTC11_00093268	chrX	-	1738	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCACAAAAGAAGTGTAAA	NA	False	NA	NA	False	NA	NA	NA	114603327	114601589	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114601600_114603300
WTC11_00093269	chrX	-	2704	2	ISM	ENSG00000289287.1	ENST00000692140.1	930	3	2	7109	2	-7109	5prime_fragment	FALSE	canonical	3	54	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCCCCCCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114606894	114602316	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_114604772_114606645
WTC11_00093270	chrX	-	926	1	FSM	ENSG00000234558.1	ENST00000424316.1	1510	1	1226	-642	1226	642	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACTAAATTCCTTTCC	NA	False	NA	NA	False	AATATA	-44	NA	116107204	116106278	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_116106300_116107200
WTC11_00093271	chrX	-	6380	2	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAATGTAAATAATTT	NA	False	NA	58	True	NA	NA	NA	116817850	116809662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116815820_116817627
WTC11_00093272	chrX	-	3019	7	FSM	ENSG00000003096.14	ENST00000262820.7	3972	7	954	-1	795	0	multi-exon	FALSE	canonical	1	1	junction_6	20.2929927698099	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCTGAGACATCCCA	NA	False	NA	-19	True	AATAAA	-15	NA	117972784	117897812	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_117972730
WTC11_00093273	chrX	-	422	5	NNC	ENSG00000198918.8	novel	390	3	NA	NA	17	158712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5194.45603504352	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGCAGATACAGGATAG	NA	False	NA	NA	False	NA	NA	NA	119791613	119627791	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119627818_119708004_119708028_119786503_119786733_119789907_119790012_119791573
WTC11_00093277	chrX	-	8010	39	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	-2	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	64.3541964744966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTATTGTGTATATT	NA	False	NA	-5	True	AATAAA	-21	NA	123733054	123600564	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123603749_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
WTC11_00093279	chrX	-	12168	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAAGCCTCAGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	125394214	125382046	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125382000_125394200
WTC11_00093280	chrX	-	749	2	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATTATATTCTTTAAA	NA	False	NA	1	True	ATTAAA	-32	NA	125394198	125384900	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125393961
WTC11_00093281	chrX	-	4626	2	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTAATACTGAATTCT	NA	False	NA	-14	True	ATTAAA	-17	NA	125394202	125384915	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125389301_125393961
WTC11_00093282	chrX	-	1011	4	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	16.9705627484771	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTGTAATACTGAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	125394196	125384918	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125385912_125386838_125387024_125393961
WTC11_00093283	chrX	-	771	1	FSM	ENSG00000198354.7	ENST00000360028.4	2791	1	2002	18	2002	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATCATCTTAGCAATT	NA	False	NA	-16	True	AATAAA	-8	NA	126164287	126163516	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126163500_126164300
WTC11_00093284	chrX	-	2248	17	FSM	ENSG00000156709.15	ENST00000535724.6	2248	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	176.7846390209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	130165664	130129361	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130137322_130137526_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
WTC11_00093286	chrX	-	2943	15	FSM	ENSG00000156709.15	ENST00000675111.1	1920	15	-1019	-4	873	0	multi-exon	FALSE	canonical	3	445	junction_7	45.4167212756334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATAGTGAAATAAATTC	NA	False	NA	NA	False	NA	NA	NA	130157653	130129399	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460
WTC11_00093288	chrX	-	4679	6	ISM	ENSG00000147255.19	ENST00000370904.6	5413	27	-243	87658	-243	-75025	5prime_fragment	FALSE	canonical	1	6	junction_2	3.38230690505755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGGGGTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	131579142	131361168	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_131364927_131368367_131368450_131368951_131369053_131389016_131389149_131399573_131399705_131578667
WTC11_00093290	chrX	-	663	2	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACTACCCATCTATCT	NA	False	NA	NA	False	AATAAA	-15	NA	131664329	131661461	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_131661706_131663910
WTC11_00093292	chrX	-	1908	7	ISM	ENSG00000213468.7	ENST00000662867.1	1302	10	1223	1815	2	5	internal_fragment	FALSE	canonical	1	6	junction_1	19.6015872373189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGGCTGAGAATAAAAT	NA	False	NA	-36	True	NA	NA	NA	131784039	131691552	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886
WTC11_00093294	chrX	-	3755	5	NIC	ENSG00000123728.10	novel	804	5	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	50.9558632543891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGTTGGTTTCTTTAAT	NA	False	NA	-17	True	AATAAA	-17	NA	132218108	132203028	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_132205588_132214133_132214447_132216995_132217157_132217277_132217807_132217915
WTC11_00093296	chrX	-	3678	3	NIC	ENSG00000171004.19	novel	3775	5	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	19	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATCTCATAATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	132957520	132626009	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_132629094_132956807_132957327_132957445
WTC11_00093297	chrX	-	4537	10	NNC	ENSG00000076716.9	novel	4959	9	NA	NA	0	49942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	230.739765766919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCAAAAAATCTCATAATG	NA	False	NA	NA	False	NA	NA	NA	133415489	133250160	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_133250188_133300551_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
WTC11_00093298	chrX	-	281	1	FSM	ENSG00000284499.1	ENST00000384840.3	75	1	1	-207	1	207	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATAGATCTGAAAAA	NA	False	NA	NA	False	AATAAA	-3	NA	134169451	134169170	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134169200_134169500
WTC11_00093299	chrX	-	3028	1	NIC	ENSG00000156504.17	novel	4246	9	NA	NA	16511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134772593	134769565	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134769600_134772600
WTC11_00093300	chrX	-	527	4	NIC	ENSG00000101928.13	novel	924	5	NA	NA	-9	11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	43.3692159127749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACTGCCTTTTATCTC	NA	False	NA	1	True	AGTAAA	-20	NA	134915247	134889111	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134889193_134891478_134891641_134896816_134897035_134915181
WTC11_00093302	chrX	-	5089	5	FSM	ENSG00000169446.6	ENST00000679621.1	1019	5	16	-4086	0	-4	multi-exon	FALSE	canonical	1	1	junction_4	56.8968364674171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTAAAGGTTTTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	135974013	135960591	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596_135973823_135973899
WTC11_00093303	chrX	-	972	3	FSM	ENSG00000169446.6	ENST00000680510.1	972	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	62.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGGTTTTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	135974013	135964732	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135965184_135967389_135967494_135973596
WTC11_00093304	chrX	-	837	3	FSM	ENSG00000147274.14	ENST00000561733.5	837	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	390	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTAACAGCTCTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	136873425	136848003	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136848583_136872267_136872346_136873245
WTC11_00093305	chrX	-	2319	10	NIC	ENSG00000147274.14	novel	4887	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	375	junction_2	1299.08326651271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	NA	False	NA	-16	True	AATAAA	-13	NA	136880722	136869193	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_136870418_136872267_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
WTC11_00093308	chrX	-	2306	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	-73	-55	0	55	multi-exon	FALSE	canonical	3	11	junction_3	73.6176307385368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGCCAGCCTCAGAGGA	NA	False	NA	NA	False	NA	NA	NA	149631792	149596500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
WTC11_00093309	chrX	-	2483	7	NIC	ENSG00000269556.9	novel	2720	7	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	65.0608689356872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631561	149596556	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608830_149611286_149611464_149631542
WTC11_00093310	chrX	-	903	4	NNC	ENSG00000269556.9	novel	903	4	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	94.8027191358748	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTCTTTATAAACATGA	NA	False	NA	NA	False	CATAAA	-19	NA	149631719	149603725	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_149604067_149608626_149608835_149611286_149611464_149631542
WTC11_00093312	chrX	-	1893	5	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	89.1880036776247	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938491	149932196	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149937632
WTC11_00093313	chrX	-	1435	1	FSM	ENSG00000234825.3	ENST00000457831.1	1822	1	415	-28	415	28	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACAGTGAGGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	150232481	150231046	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_150231000_150232500
WTC11_00093314	chrX	-	988	9	FSM	ENSG00000102181.21	ENST00000466436.5	988	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	15.0561449249135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGCCAAGATGATGCTGA	NA	False	NA	NA	False	NA	NA	NA	150898629	150768728	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150831230_150831294_150898521
WTC11_00093317	chrX	-	944	6	NIC	ENSG00000011677.13	novel	338	2	NA	NA	-55	25	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	20.8959326185744	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGATTCACCTAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	152451370	152251032	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_152251175_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
WTC11_00093318	chrX	-	853	5	NIC	ENSG00000268902.4	novel	789	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	42.6753734605803	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714577	152708260	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_152708641_152708798_152709008_152709460_152709576_152713255_152713316_152714488
WTC11_00093319	chrX	-	875	5	NNC	ENSG00000268902.4	novel	789	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	42.8748177838694	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714577	152708260	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_152708641_152708798_152709001_152709460_152709576_152713255_152713316_152714459
WTC11_00093320	chrX	-	705	4	NNC	ENSG00000198930.13	novel	875	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	152733733	152727486	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_152727864_152728022_152728225_152732444_152732505_152733667
WTC11_00093321	chrX	-	1645	2	FSM	ENSG00000268606.6	ENST00000598543.5	1662	2	16	1	10	-1	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCATTTCTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	152753868	152749864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152751429_152753787
WTC11_00093324	chrX	-	1175	8	FSM	ENSG00000185825.17	ENST00000645377.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1009.72992954168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGCGGTGTGTGACTG	NA	False	NA	-6	True	AATAAA	-18	NA	153724388	153700496	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153703039_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
WTC11_00093326	chrX	-	1261	11	NIC	ENSG00000067829.20	novel	1335	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_10	107.938362040565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	NA	False	NA	-32	True	AATAAA	-17	NA	153794353	153785765	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153794245
WTC11_00093329	chrX	-	1075	2	FSM	ENSG00000102030.16	ENST00000482485.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCCCGAGTACAAGGAA	NA	False	NA	83	True	NA	NA	NA	153931440	153929826	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762
WTC11_00093330	chrX	-	376	4	FSM	ENSG00000102032.13	ENST00000451114.1	376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.18544972870135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCCCCTCCCCCGCCCCC	NA	False	NA	-64	True	NA	NA	NA	153940215	153935332	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153935405_153935488_153935577_153936003_153936106_153940101
WTC11_00093331	chrX	-	3593	15	NNC	ENSG00000184216.14	novel	3581	14	NA	NA	0	34882	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.5350009308757	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTGGCTCACACCTGT	NA	False	NA	NA	False	AAAAAG	-6	NA	154019876	153975623	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153975661_154010505_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
WTC11_00093332	chrX	-	3590	15	NNC	ENSG00000184216.14	novel	3581	14	NA	NA	0	34882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.5350009308757	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTGGCTCACACCTGT	NA	False	NA	NA	False	AAAAAG	-6	NA	154019876	153975623	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153975662_154010509_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
WTC11_00093334	chrX	-	3458	14	NNC	ENSG00000184216.14	novel	3581	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	67.4052479827891	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	154019872	154010506	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154011918_154012528_154012679_154013042_154013344_154014041_154014279_154016031_154016098_154016439_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
WTC11_00093337	chrX	-	8243	47	NNC	ENSG00000196924.19	novel	8240	47	NA	NA	0	45144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	542.804521955022	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCAGGGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	154371222	154303379	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154303411_154348533_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
WTC11_00093338	chrX	-	2427	3	NIC	ENSG00000196924.19	novel	914	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2376	junction_2	108.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGTGGCTGTAGCT	NA	False	NA	-7	True	AATAAA	-16	NA	154351203	154348530	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_154349566_154349648_154349868_154350030
WTC11_00093341	chrX	-	1025	4	NNC	ENSG00000196976.8	novel	967	3	NA	NA	-19	70560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	840.716493368735	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGGAGGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	154479300	154407214	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154407248_154477768_154478059_154478282_154478412_154478727
WTC11_00093343	chrX	-	456	1	FSM	ENSG00000272681.2	ENST00000593346.1	708	1	24	228	24	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTAAGGAAAGTCGAT	NA	False	NA	NA	False	NA	NA	NA	154633158	154632702	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154632700_154633200
WTC11_00093344	chrX	-	2378	3	FSM	ENSG00000130830.15	ENST00000491955.5	2378	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCTTGTAACTCTGGG	NA	False	NA	-2	True	AATAAA	-20	NA	154783234	154778685	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154779354_154781238_154781314_154781599
WTC11_00093345	chrX	-	729	6	FSM	ENSG00000130830.15	ENST00000453245.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	32.6521055982612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCTCAACGGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	154805485	154781753	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154805271
WTC11_00093346	chrX	-	375	3	FSM	ENSG00000130830.15	ENST00000493871.1	585	3	0	210	0	168	multi-exon	FALSE	canonical	3	66	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTCCACCTCACAAATGA	NA	False	NA	NA	False	NA	NA	NA	154786225	154783862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154784109_154785050_154785158_154786203
WTC11_00093347	chrX	-	263	2	FSM	ENSG00000185010.15	ENST00000483822.2	461	2	0	198	0	-198	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTGAAGAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	154966516	154965969	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154966142_154966425
WTC11_00093349	chrX	+	217	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATCACAGCTGATATC	12944433	False	NA	NA	False	NA	NA	NA	12944445	12944662	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_12944400_12944700
WTC11_00093350	chrX	+	2586	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCATTTATAAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	47509786	47512372	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47509800_47512400
WTC11_00093351	chrX	+	3972	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74223331	74227303	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_74223300_74227300
WTC11_00093352	chrX	+	219	1	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAACGCAAACATTCAAAA	NA	False	NA	NA	False	NA	NA	NA	80569425	80569644	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_80569400_80569600
WTC11_00093353	chrX	+	2533	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGATATTTTTTGAAG	91888773	False	NA	NA	False	AATAAA	-26	NA	91888791	91891324	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_91888800_91891300
WTC11_00093355	chrX	+	202	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCGCAGCACACACGGC	NA	False	NA	NA	False	NA	NA	NA	99939190	99939392	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_99939200_99939400
WTC11_00093356	chrX	+	5468	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATACGAATGTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	112621645	112627113	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_112621600_112627100
WTC11_00093357	chrX	+	298	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCCGATATCCATTAGG	NA	False	NA	NA	False	NA	NA	NA	149318674	149318972	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_149318700_149319000
WTC11_00093358	chrY	+	1315	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	-410	-94	-92	0	multi-exon	FALSE	canonical	3	125	junction_1	692.813045970316	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTCCCCCTTGTG	NA	False	NA	26	True	AATAAA	-22	NA	2841509	2866956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
WTC11_00093359	chrY	+	982	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	-199	406	-199	0	multi-exon	FALSE	canonical	3	1142	junction_1	324.254015652338	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	NA	False	NA	-28	True	NA	NA	NA	2841402	2866862	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
WTC11_00093360	chrY	+	998	3	FSM	ENSG00000129824.16	ENST00000477725.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_2	37.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTCCCCCTTGTG	2854085	False	NA	26	True	AATAAA	-22	NA	2854095	2866956	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2854772_2865087_2865246_2866792
WTC11_00093361	chrY	+	6192	8	FSM	ENSG00000067646.12	ENST00000155093.8	5336	8	-856	0	-756	0	multi-exon	FALSE	canonical	3	14	junction_1	7.43955232359516	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	NA	False	NA	25	True	AATAAA	-41	NA	2934524	2982506	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2935770_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
WTC11_00093362	chrY	+	6059	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	-646	-300	-646	300	multi-exon	FALSE	canonical	3	14	junction_1	7.43955232359516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	2934634	2982806	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
WTC11_00093363	chrY	+	5464	7	NIC	ENSG00000067646.12	novel	5336	8	NA	NA	-121	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.9675487140108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATACCAATACTAAGTTA	2935148	False	NA	21	True	AATAAA	-37	NA	2935159	2982502	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_2935770_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
WTC11_00093364	chrY	+	5722	2	ISM	ENSG00000099715.14	ENST00000620615.4	329	3	-94	23848	0	-23848	5prime_fragment	FALSE	canonical	3	49	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCATTTTGTTTACAA	4998929	True	NA	NA	False	AATAAA	-43	NA	5000295	5008099	WTC11_long_short	iso_detect_ref_jhu_pertea	ISM_chrY_+_5000606_5002687
WTC11_00093365	chrY	+	338	1	FSM	ENSG00000252468.1	ENST00000516659.1	191	1	68	-215	68	215	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCACTTGAACCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	5019143	5019481	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5019100_5019500
WTC11_00093366	chrY	+	1268	1	FSM	ENSG00000214207.2	ENST00000388836.3	1287	1	47	-28	47	28	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGGAGGCCAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5573191	5574459	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5573200_5574500
WTC11_00093367	chrY	+	5301	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	-17	0	17	multi-exon	FALSE	canonical	3	216	junction_3	156.629073503825	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTTGACTGGGGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
WTC11_00093368	chrY	+	9640	48	FSM	ENSG00000114374.13	ENST00000651177.1	9640	48	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_3	66.4036997120334	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGCTGAATTCACA	12660332	True	NA	19	True	TTTAAA	-26	NA	12662367	12860802	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093369	chrY	+	12433	49	NIC	ENSG00000114374.13	novel	9640	48	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	75.7157398688601	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTCCTGTGGTGTGT	12660332	True	NA	10	True	AATAAA	-11	NA	12662367	12860838	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12687684_12690442_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093370	chrY	+	9257	46	FSM	ENSG00000114374.13	ENST00000338981.7	10036	46	779	0	-30	0	multi-exon	FALSE	canonical	3	26	junction_1	52.9916555275975	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	NA	False	NA	11	True	AATAAA	-12	NA	12702009	12860839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12702056_12708633_12708694_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093372	chrY	+	2410	2	FSM	ENSG00000114374.13	ENST00000471409.1	2410	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	12856802	False	NA	11	True	AATAAA	-12	NA	12856812	12860839	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12857662_12859278
WTC11_00093373	chrY	+	4427	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	-19	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	52.2673042517978	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12891803	True	NA	18	True	AATAAA	-14	NA	12904848	12920478	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
WTC11_00093375	chrY	+	507	2	FSM	ENSG00000067048.17	ENST00000469101.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCCTATTATTAAGGG	12912581	False	NA	NA	False	AAAACA	-2	NA	12912639	12913801	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12913063_12913717
WTC11_00093376	chrY	+	322	3	FSM	ENSG00000067048.17	ENST00000472510.5	572	3	0	250	0	0	multi-exon	FALSE	canonical	3	403	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGTTTTGTTATAAAA	12912920	False	NA	NA	False	NA	NA	NA	12912962	12914649	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12913063_12913717_12913854_12914563
WTC11_00093377	chrY	+	666	4	FSM	ENSG00000067048.17	ENST00000463199.1	621	4	-45	0	0	0	multi-exon	FALSE	canonical	3	339	junction_3	55.1382101833404	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCAGTTTTTATATAT	12912920	False	NA	NA	False	NA	NA	NA	12912962	12915227	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12913063_12913717_12913854_12914563_12914650_12914883
WTC11_00093378	chrY	+	517	3	FSM	ENSG00000067048.17	ENST00000495478.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_2	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCATGGAGACCGGTCA	12915443	False	NA	NA	False	NA	NA	NA	12915495	12916353	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12915775_12915882_12916028_12916260
WTC11_00093380	chrY	+	962	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13702291	True	NA	7	True	AATAAA	-18	NA	13702893	13706024	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13702954_13704333_13704436_13705224
WTC11_00093381	chrY	+	1354	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	72	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703863	False	NA	7	True	AATAAA	-18	NA	13703881	13706024	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_13704436_13705224
WTC11_00093382	chrY	+	822	4	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-28	-66893	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	52.427728032661	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAACAGACTCTTTTC	13747683	True	NA	-7	True	NA	NA	NA	13751627	13791701	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13791371
WTC11_00093383	chrY	+	3349	9	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-28	7977	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	32.7251814357079	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCCCTTCATCACTCC	13747683	True	NA	NA	False	NA	NA	NA	13751627	13896957	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
WTC11_00093384	chrY	+	6149	11	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-28	10493	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	37.9379756971824	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	13747683	True	NA	4	True	AATAAA	-19	NA	13751627	13899473	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13854443_13854578_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
WTC11_00093386	chrY	+	6082	10	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-86	10493	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	31.5152324526285	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	13751559	False	NA	4	True	AATAAA	-19	NA	13751569	13899473	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889469_13896814
WTC11_00093388	chrY	+	7368	7	FSM	ENSG00000165246.15	ENST00000643089.1	7368	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	6.84754619472471	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTATATAAAGGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	14522572	14845639	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
WTC11_00093389	chrY	+	1188	5	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	22.4555115728856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAATCTATTACACATG	14521015	True	NA	2	True	AATAAA	-16	NA	14522640	14733542	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
WTC11_00093391	chrY	+	4529	3	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	6	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTCTTCCAGCATGA	NA	False	NA	-80	True	NA	NA	NA	18630090	18641473	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_18630340_18636074_18636170_18637288
WTC11_00093392	chrY	+	972	6	NNC	ENSG00000131002.13	novel	2098	4	NA	NA	-7	39	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.2615789047686	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATGGGAATTATCACT	19561107	True	NA	21	True	AATAAA	-24	NA	19567342	19590286	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
WTC11_00093393	chrY	+	2109	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	61	junction_2	13.4742552876052	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	19561103	True	NA	NA	False	AATAAA	-15	NA	19567338	19590418	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
WTC11_00093394	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	19561146	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
WTC11_00093396	chrY	+	10541	8	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_4	14.8213855421062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	19561146	True	NA	113	True	ACTAAA	-21	NA	19567381	19606274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082_19591960_19593398_19597666_19599738_19599832_19602215_19602312_19603796
WTC11_00093397	chrY	+	5958	10	NNC	ENSG00000131002.13	novel	1574	10	NA	NA	17	-337	intron_retention	FALSE	canonical	2	5	junction_6	38.4046036335087	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAAGTTAATGGAAC	19561163	True	NA	NA	False	AATATA	-21	NA	19567398	19605937	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_19567483_19587209_19587508_19589520_19589613_19590609_19590773_19591779_19591960_19593398_19596135_19597590_19597666_19599738_19599832_19602215_19602312_19603796
WTC11_00093403	chrY	+	998	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	-183	524	-183	0	multi-exon	FALSE	canonical	3	408	junction_3	31.8821615048638	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	NA	False	NA	14	True	AATAAA	-26	NA	20575592	20592630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
WTC11_00093404	chrY	+	764	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	-18	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	180.274901192595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	20572890	True	NA	14	True	AATAAA	-26	NA	20575775	20592630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
WTC11_00093405	chrY	-	829	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGGTATTTCATTTT	NA	False	NA	-10	True	AATAAA	-18	NA	2787682	2786853	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_2786900_2787700
WTC11_00093406	chrY	-	1262	3	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	3	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGACCTATACATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	4360864	4325654	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_-_4326524_4342444_4342608_4360634
WTC11_00093407	chrY	-	830	1	FSM	ENSG00000231341.1	ENST00000430062.1	855	1	117	-92	117	92	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTATTGCTAAATATGT	NA	False	NA	NA	False	NA	NA	NA	5207952	5207122	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5207100_5208000
WTC11_00093408	chrY	-	214	1	FSM	ENSG00000235001.3	ENST00000422633.1	1220	1	984	22	984	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGCTGACCTCATCT	NA	False	NA	NA	False	NA	NA	NA	5337980	5337766	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5337800_5338000
WTC11_00093409	chrY	-	4498	2	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCAGCAAAGGGAGATAA	NA	False	NA	NA	False	AAAAAG	-2	NA	5946003	5941463	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_-_5942265_5942306
WTC11_00093410	chrY	-	4536	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGTCAGCAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	5946003	5941467	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_-_5941500_5946000
WTC11_00093411	chrY	-	623	3	FSM	ENSG00000206159.12	ENST00000357871.6	623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCATTGATCTGGAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	12420456	12402250	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_12402591_12406795_12406938_12420315
WTC11_00093412	chrY	-	4717	30	NIC	ENSG00000183878.16	novel	4705	29	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	17.0073076550698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCATTTGTCCACGTT	NA	False	NA	-7	True	AATAAA	-20	NA	13479897	13234583	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358554_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093415	chrY	-	6505	28	FSM	ENSG00000183878.16	ENST00000331397.8	6529	28	0	24	0	-18	multi-exon	FALSE	canonical	3	27	junction_16	14.6219858136917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTGTCTTTTCTACC	NA	False	NA	14	True	NA	NA	NA	13480673	13248402	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093420	chrY	-	1495	2	FSM	ENSG00000176728.10	ENST00000324446.3	1495	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	18878228	18872500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067
WTC11_00093421	chrY	-	827	5	FSM	ENSG00000176728.10	ENST00000664804.1	827	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	18.2671152621316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076029	18872500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_18932650_18932842_19068723_19068799_19075940
WTC11_00093422	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	19076008	18932006	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18932842_19068723_19068799_19075940
WTC11_00093423	chrY	-	515	2	FSM	ENSG00000176728.10	ENST00000331787.2	515	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19077416	18932698	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18932842_19077044
WTC11_00093424	chrY	-	855	1	FSM	ENSG00000185275.6	ENST00000382840.3	243	1	0	-612	0	612	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGACCTTTTATGTAGTA	NA	False	NA	NA	False	NA	NA	NA	18992709	18991854	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18991900_18992700
WTC11_00093425	chrY	-	3112	2	FSM	ENSG00000176728.10	ENST00000667450.1	3232	2	0	120	0	-120	multi-exon	FALSE	canonical	2	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAACCTGCGGATGGTC	NA	False	NA	NA	False	AATAAA	-11	NA	19044666	19040359	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19043347_19044541
WTC11_00093426	chrY	-	2935	1	FSM	ENSG00000260197.1	ENST00000566193.1	2666	1	-355	86	-355	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGTTCTTTCTTCTGC	NA	False	NA	NA	False	NA	NA	NA	19694961	19692026	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19692000_19695000
WTC11_00093427	chrY	-	6825	27	FSM	ENSG00000012817.16	ENST00000317961.9	6825	27	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_23	19.4465205053067	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCTTGGTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	19744726	19703864	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
WTC11_00093428	chrY	-	3685	13	NIC	ENSG00000012817.16	novel	5134	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	35.4058807105386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATGATTTGAACTTC	NA	False	NA	-6	True	AATAAA	-23	NA	19716348	19705419	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19710261_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278
WTC11_00093430	chrY	-	5134	26	FSM	ENSG00000012817.16	ENST00000382806.6	5134	26	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_22	24.9692290629887	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATGATTTGAACTTC	NA	False	NA	-6	True	AATAAA	-23	NA	19744761	19705419	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741734_19741858_19743161_19743240_19744384_19744554_19744670
WTC11_00093431	chrY	-	856	3	FSM	ENSG00000012817.16	ENST00000478891.1	856	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGACTCAGATTTTACT	NA	False	NA	NA	False	AAAAAG	-3	NA	19716348	19715135	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19715740_19715822_19716005_19716278
WTC11_00093432	chrY	+	6836	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCGAAGGGAGATAGGGG	NA	False	NA	NA	False	NA	NA	NA	5323241	5330077	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_5323200_5330100
WTC11_00093433	chrY	+	266	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGACTCCGTCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	15882690	15882956	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_15882700_15883000
WTC11_00093434	chrY	+	3999	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATATATATA	NA	False	NA	NA	False	NA	NA	NA	18902555	18906554	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_18902600_18906600
WTC11_00093436	chrY	+	5028	4	FSM	ENSG00000114374.13	ENST00000417071.1	882	4	-169	-3977	0	-1	multi-exon	FALSE	canonical	3	89	junction_3	215.810616565132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAGTGTCTAAAGCAGT	12660332	True	NA	NA	False	AATAAA	-43	NA	12662367	12692232	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687684
WTC11_00093437	chrY	+	9756	49	NIC	ENSG00000114374.13	novel	9640	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	76.9639136895771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGCTGAATTCACA	12660332	True	NA	19	True	TTTAAA	-26	NA	12662367	12860802	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093438	chrY	+	9360	47	NNC	ENSG00000114374.13	novel	9640	48	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	63.1663270827634	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGCTGAATTCACA	12660332	True	NA	19	True	TTTAAA	-26	NA	12662367	12860802	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_12662707_12664639_12664687_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842280_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093439	chrY	+	9627	47	NIC	ENSG00000114374.13	novel	9640	48	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	74.052416550545	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	12660336	True	NA	11	True	AATAAA	-12	NA	12662371	12860839	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
WTC11_00093440	chrY	+	4373	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	111	junction_1	89.9675071553614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCCTGCTGTCACTTG	12903450	True	NA	14	True	AATAAA	-10	NA	12905732	12920474	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
WTC11_00093441	chrY	+	6014	10	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-25	10495	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	31.3262403319219	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTCACTTATTTATT	13747686	True	NA	6	True	AATAAA	-21	NA	13751630	13899475	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
WTC11_00093442	chrY	+	8199	16	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-25	4187	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	42.6664583328247	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATAAACCACACCAAGGA	13747686	True	NA	NA	False	AATAAA	-4	NA	13751630	13920011	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13841756_13841788_13842043_13842129_13854443_13854578_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13902873_13902969_13908171_13908314_13909247_13909361_13915765
WTC11_00093444	chrY	+	722	4	FSM	ENSG00000165246.15	ENST00000413217.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	24.5537958142705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	NA	False	NA	9	True	AATAAA	-23	NA	14622180	14733549	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_14622592_14719458_14719519_14723116_14723270_14733451
WTC11_00093445	chrY	+	637	4	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-84	-22381	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	3.39934634239519	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGATGCACCTAAAACAC	NA	False	NA	NA	False	AATAAA	-22	NA	18326168	18330829	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18330643
WTC11_00093446	chrY	+	963	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-33	0	-11	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	19561103	True	NA	NA	False	AATAAA	-20	NA	19567338	19590423	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
WTC11_00093447	chrY	+	3174	5	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	55	junction_4	17.7904468746572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTATTTGTTTTTATT	19561103	True	NA	13	True	AATAAA	-18	NA	19567338	19594161	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082_19591960_19593398
WTC11_00093448	chrY	+	13216	5	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	84	junction_2	6.83282518435822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	19561154	True	NA	113	True	ACTAAA	-21	NA	19567389	19606274	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567483_19587209_19597666_19599738_19599832_19602215_19602312_19603796
WTC11_00093449	chrY	+	1904	3	FSM	ENSG00000131002.13	ENST00000686905.1	1911	3	7	0	5	0	multi-exon	FALSE	canonical	3	61	junction_2	20.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	19561121	True	NA	5	True	AATAAA	-16	NA	19567356	19589849	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567483_19587209_19587508_19588369
WTC11_00093450	chrY	+	9034	7	NIC	ENSG00000131002.13	novel	841	5	NA	NA	0	23	intron_retention	FALSE	canonical	3	29	junction_1	24.4727739879783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGAATGTCACCTCAA	19588525	True	NA	NA	False	AATATA	-20	NA	19588542	19606297	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19588651_19589520_19589613_19590082_19591960_19593398_19597666_19599738_19599832_19602215_19602312_19603796
WTC11_00093452	chrY	+	570	1	FSM	ENSG00000267793.1	ENST00000586015.1	570	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAGGTAACTAAATGT	19598173	False	NA	NA	False	AATGAA	-31	NA	19598187	19598757	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19598200_19598800
WTC11_00093453	chrY	+	641	3	FSM	ENSG00000198692.10	ENST00000485584.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	20587831	False	NA	14	True	AATAAA	-26	NA	20587846	20592630	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20588106_20589483_20589576_20592340
WTC11_00093454	chrY	-	933	1	FSM	ENSG00000278847.1	ENST00000611750.1	366	1	-578	11	-578	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCAAAAACGTGTATTG	NA	False	NA	96	True	ATTAAA	-16	NA	2935349	2934416	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_2934400_2935300
WTC11_00093457	chrY	-	2431	2	Antisense	novelGene_ENSG00000099715.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	1	True	AATAAA	-20	NA	5330063	5324824	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrY_-_5325185_5327992
WTC11_00093458	chrY	-	518	2	Antisense	novelGene_ENSG00000099715.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	5329995	5324828	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrY_-_5325185_5329833
WTC11_00093461	chrY	-	5410	29	NIC	ENSG00000183878.16	novel	4705	29	NA	NA	0	682	combination_of_known_junctions	FALSE	canonical	3	30	junction_16	13.5203927608692	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCTCTGTATTATACA	NA	False	NA	NA	False	AATAAA	-28	NA	13479991	13233894	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093462	chrY	-	5182	28	FSM	ENSG00000183878.16	ENST00000682216.1	4571	28	-9	-602	0	602	multi-exon	FALSE	canonical	3	27	junction_16	13.5917347594886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTCACTTTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	13479978	13233974	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093463	chrY	-	2494	1	Genic_Genomic	ENSG00000183878.16	novel	NA	NA	NA	NA	-1465	4041	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTTGAATGATAAAACA	NA	False	NA	NA	False	AATATA	-33	NA	13246831	13244337	WTC11_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrY_-_13244300_13246800
WTC11_00093464	chrY	-	6029	30	NIC	ENSG00000183878.16	novel	6174	30	NA	NA	-1	-49	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	17.7195083179451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTAATTTAATATTAAC	NA	False	NA	-17	True	ATTAAA	-22	NA	13480003	13248433	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358554_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093465	chrY	-	4287	20	FSM	ENSG00000183878.16	ENST00000329134.9	4325	20	35	3	35	-3	multi-exon	FALSE	canonical	1	2	junction_1	18.5340892782451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTTATTTTTGGAATTT	NA	False	NA	-7	True	AATAAA	-16	NA	13480635	13323036	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13323369_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093466	chrY	-	638	4	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-65	-22362	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	3.2659863237109	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGATTCTTTTAAAAG	NA	False	NA	NA	False	AATAAA	-42	NA	17579819	17575161	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_17575368_17576702_17576821_17579315_17579476_17579665
WTC11_00093467	chrY	-	1867	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGATATGTCTCGCT	NA	False	NA	NA	False	AATAAA	-19	NA	18690290	18681569	WTC11_long_short	iso_detect_ref_jhu_pertea	Antisense_chrY_-_18683112_18684230_18684326_18690060
WTC11_00093469	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.202725191719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076008	18872500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
WTC11_00093470	chrY	-	941	3	FSM	ENSG00000176728.10	ENST00000454875.2	802	3	-139	0	-97	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19077513	18872500	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_19077044
WTC11_00093471	chrY	-	578	3	NNC	ENSG00000176728.10	novel	685	3	NA	NA	-33062	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTGTTGTATCAGGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	18912476	18872503	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_18872835_18877067_18877206_18912367
WTC11_00093472	chrY	-	662	5	NIC	ENSG00000176728.10	novel	827	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.5682057668226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATTTGTTGTATCAGGT	NA	False	NA	-3	True	AATAAA	-12	NA	19075997	18872505	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_18872835_18877067_18877206_19068723_19068799_19073498_19073562_19075940
WTC11_00093473	chrY	-	243	1	FSM	ENSG00000185275.6	ENST00000382840.3	243	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCAGGCCAAGAAACG	NA	False	NA	NA	False	NA	NA	NA	18992709	18992466	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18992500_18992700
WTC11_00093475	chrY	-	6015	1	FSM	ENSG00000260197.1	ENST00000566193.1	2666	1	-3622	273	-3622	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACATATTTAAATAAGCT	NA	False	NA	NA	False	NA	NA	NA	19698228	19692213	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19692200_19698200
WTC11_00093476	chrY	-	5039	27	NNC	ENSG00000012817.16	novel	6825	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_8	23.409020665562	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATGATTTGAACTTC	NA	False	NA	-6	True	AATAAA	-23	NA	19744726	19705419	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709579_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
WTC11_00093478	chrY	+	4540	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	848	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTCTCTTCACACG	NA	False	NA	36	True	AATAAA	-27	NA	5941465	5946005	WTC11_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_5941500_5946000
WTC11_00093480	chrY	+	3421	3	FSM	ENSG00000099715.14	ENST00000362095.9	4220	3	799	0	799	0	multi-exon	FALSE	canonical	2	7	junction_2	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGTCATGAAACATGC	NA	False	NA	NA	False	AATATA	-33	NA	5056888	5104700	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5057460_5098214_5100708_5104343
WTC11_00093482	chrY	+	832	2	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	383	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTTCTAAGACCTGT	13704155	False	NA	5	True	AATAAA	-16	NA	13704281	13706022	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13704436_13705344
WTC11_00093483	chrY	+	1008	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-86	-66875	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	49.811519751961	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTGAGTATTCTTT	13751559	False	NA	11	True	AATAAA	-12	NA	13751569	13791719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13791411
WTC11_00093484	chrY	+	1048	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-86	-66875	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	45.2023229491583	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTGAGTATTCTTT	13751559	False	NA	11	True	AATAAA	-12	NA	13751569	13791719	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13791371
WTC11_00093485	chrY	+	8136	15	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-86	4197	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	43.4649753437484	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAGGAGTCGACTCAT	13751559	False	NA	NA	False	AATAAA	-14	NA	13751569	13920021	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13841756_13841788_13842043_13842129_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13902873_13902969_13908171_13908314_13909247_13909361_13915765
WTC11_00093486	chrY	+	3360	6	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	58	-1719	combination_of_known_junctions	FALSE	canonical	2	19	junction_2	19.3845299143415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGTGTTTTCAGTT	14522418	False	NA	NA	False	AAAAAG	-9	NA	14522809	14841928	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14824187_14824374_14829729_14830520_14840412
WTC11_00093488	chrY	+	12432	6	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	0	-18	intron_retention	FALSE	canonical	3	61	junction_2	11.8760262714428	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGATATAATGGTTAATA	19561146	True	NA	95	True	ACTAAA	-3	NA	19567381	19606256	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567571_19587209_19587508_19588369_19597666_19599738_19599832_19602215_19602312_19603796
WTC11_00093491	chrY	-	3394	19	FSM	ENSG00000183878.16	ENST00000684226.1	3391	19	0	-3	0	0	multi-exon	FALSE	canonical	1	3	junction_17	21.0185103605793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCACGTTCCTCATT	NA	False	NA	0	True	AATAAA	-27	NA	13359787	13234576	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358620_13359087_13359223_13359766
WTC11_00093493	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.04155872120988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	WTC11_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
WTC11_00093495	chrY	-	748	4	NIC	ENSG00000176728.10	novel	802	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_3	20.757863302587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19077221	18872500	WTC11_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_18872835_18877067_18877206_18932742_18932842_19077044
WTC11_00093496	chrY	-	372	4	NNC	ENSG00000215580.12	novel	352	4	NA	NA	7611	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.71404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCTAGTAACACAGAGTC	NA	False	NA	-9	True	AATAAA	-12	NA	19559396	19555400	WTC11_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_19555555_19557229_19557290_19558039_19558141_19559339
